Your job contains 1 sequence.
>001581
MDLPRVKRLKVSRGEDDYMPGNIIEIELHNFMTFDHLICKPGSRLNLVIGPNGSGKSSLV
CAIALALGGDTQLLGRATSIGAYVKRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEW
FFNGKVVPKGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLP
VQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKK
LPWLKYDMKKAEYIAAKEQEKDAKKKLDEAANTLHEFSKPIEGKKQEKAILDGDCKKLSS
LINENSKRRMDFLEKVDQGVQVQGKYKEMQELRRQEQSRQQRILKAREELAAAELDLQTV
PAYEPPHDKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNN
KLLHALRNSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLEDHVGHYIW
KSFITQDAGDRDFLAKNLKPFDVPILNYVSNESSRKEPFQISEEMRALGISARLDQVFDA
PHAVKEVLISQFGLDSSYIGSKETDQKADNVAKLGILDFWTPENHYRWSISRYGGHVSAS
VEPVNQSRLLLCSVDGNEIERLRSKKKKLEESVDELEESLKSMQTEQRLIEDEAAKLQKE
REEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAADLNIQQFKYA
IEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYEDCKKEVE
HCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQ
EYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEMA
VAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVLSAHHQSGGERSVSTILYLVSLQDLTN
CPFRVVDEINQGMDPINERKMFQQLVRAASQPNTPQCFLLTPKLLPDLEYSEACSILNIM
NGPWIEQPSKVWSSGECWGTVTGLVGESRC
The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 001581
(1050 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2146107 - symbol:SMC5 "AT5G15920" species:3702... 3542 0. 1
UNIPROTKB|D4A4D0 - symbol:Smc5 "Protein Smc5" species:101... 1228 5.5e-125 1
UNIPROTKB|F1PEG5 - symbol:SMC5 "Uncharacterized protein" ... 1223 1.9e-124 1
DICTYBASE|DDB_G0290919 - symbol:smc5 "AAA ATPase domain-c... 1208 7.2e-123 1
ZFIN|ZDB-GENE-061013-288 - symbol:smc5 "structural mainte... 1199 6.5e-122 1
UNIPROTKB|Q5ZJY5 - symbol:SMC5 "Structural maintenance of... 1129 1.7e-114 1
UNIPROTKB|Q805A1 - symbol:smc5 "Structural maintenance of... 1109 2.2e-112 1
UNIPROTKB|F1P1S9 - symbol:SMC5 "Structural maintenance of... 1091 1.8e-110 1
UNIPROTKB|F1P1S0 - symbol:SMC5 "Structural maintenance of... 1088 3.8e-110 1
UNIPROTKB|F1NK20 - symbol:SMC5 "Structural maintenance of... 1084 1.0e-109 1
RGD|1307492 - symbol:Smc5 "structural maintenance of chro... 608 1.1e-106 2
POMBASE|SPAC14C4.02c - symbol:smc5 "Smc5-6 complex SMC su... 468 4.2e-79 2
FB|FBgn0052438 - symbol:Smc5 "Smc5" species:7227 "Drosoph... 724 2.2e-71 1
UNIPROTKB|F1MPW4 - symbol:SMC5 "Uncharacterized protein" ... 696 2.4e-66 1
WB|WBGene00016151 - symbol:smc-5 species:6239 "Caenorhabd... 430 1.7e-65 2
UNIPROTKB|Q802R9 - symbol:smc5 "Structural maintenance of... 683 8.8e-65 1
UNIPROTKB|Q8IY18 - symbol:SMC5 "Structural maintenance of... 676 6.2e-64 1
UNIPROTKB|D4A6A4 - symbol:Smc5 "Protein Smc5" species:101... 675 8.3e-64 1
MGI|MGI:2385088 - symbol:Smc5 "structural maintenance of ... 673 1.4e-63 1
SGD|S000005394 - symbol:SMC5 "Component of the SMC5-SMC6 ... 412 1.7e-63 2
UNIPROTKB|J9P883 - symbol:SMC5 "Uncharacterized protein" ... 669 4.3e-63 1
ASPGD|ASPL0000076401 - symbol:AN8742 species:162425 "Emer... 614 1.0e-56 1
UNIPROTKB|F1P1S3 - symbol:SMC5 "Structural maintenance of... 604 8.5e-56 1
UNIPROTKB|F1P1S2 - symbol:SMC5 "Structural maintenance of... 604 8.7e-56 1
UNIPROTKB|F1SJC8 - symbol:LOC100515003 "Uncharacterized p... 578 2.5e-55 1
UNIPROTKB|F1P1S7 - symbol:SMC5 "Structural maintenance of... 598 4.0e-55 1
ZFIN|ZDB-GENE-040426-1624 - symbol:pufa "PUF (Pumilio/FBF... 487 6.2e-51 2
CGD|CAL0001481 - symbol:SMC5 species:5476 "Candida albica... 410 1.7e-34 1
UNIPROTKB|Q59UE8 - symbol:SMC5 "Potential nuclear DNA rep... 410 1.7e-34 1
UNIPROTKB|Q6P9I7 - symbol:smc6 "Structural maintenance of... 213 4.2e-29 3
UNIPROTKB|Q96SB8 - symbol:SMC6 "Structural maintenance of... 216 7.3e-29 3
RGD|1311214 - symbol:Smc6 "structural maintenance of chro... 215 1.2e-28 3
UNIPROTKB|E1BFH7 - symbol:SMC6 "Uncharacterized protein" ... 229 9.3e-28 4
MGI|MGI:1914491 - symbol:Smc6 "structural maintenance of ... 215 1.1e-27 4
UNIPROTKB|F1SCS4 - symbol:SMC6 "Uncharacterized protein" ... 216 3.4e-27 3
UNIPROTKB|E2QUA0 - symbol:SMC6 "Uncharacterized protein" ... 215 7.3e-27 4
UNIPROTKB|E1BWW3 - symbol:SMC6 "Uncharacterized protein" ... 206 7.7e-27 3
UNIPROTKB|Q802R8 - symbol:smc6 "Structural maintenance of... 202 6.6e-26 3
ZFIN|ZDB-GENE-070705-287 - symbol:si:dkey-119f1.1 "si:dke... 201 8.4e-26 3
TAIR|locus:2161163 - symbol:MIM "AT5G61460" species:3702 ... 217 3.6e-25 2
ASPGD|ASPL0000035336 - symbol:AN10415 species:162425 "Eme... 204 1.6e-22 4
UNIPROTKB|I3L795 - symbol:I3L795 "Uncharacterized protein... 272 2.0e-22 1
UNIPROTKB|Q9X0R4 - symbol:smc "Chromosome partition prote... 208 1.1e-21 4
FB|FBgn0039164 - symbol:CG5524 species:7227 "Drosophila m... 198 1.1e-20 3
TAIR|locus:2160289 - symbol:SMC6A "structural maintenance... 166 2.4e-20 3
POMBASE|SPCC5E4.06 - symbol:smc6 "Smc5-6 complex SMC subu... 180 4.8e-19 4
FB|FBgn0015615 - symbol:Cap "Chromosome-associated protei... 166 7.2e-19 3
GENEDB_PFALCIPARUM|MAL13P1.96 - symbol:MAL13P1.96 "chromo... 191 2.9e-18 3
UNIPROTKB|Q8IED2 - symbol:MAL13P1.96 "Structural maintena... 191 2.9e-18 3
CGD|CAL0003255 - symbol:SMC6 species:5476 "Candida albica... 178 1.1e-17 2
UNIPROTKB|Q81ZL2 - symbol:smc "Chromosome partition prote... 182 2.3e-17 3
TIGR_CMR|CBU_0540 - symbol:CBU_0540 "SMC family protein" ... 182 2.3e-17 3
UNIPROTKB|F1SRP0 - symbol:SMC2 "Structural maintenance of... 167 3.6e-17 4
DICTYBASE|DDB_G0288993 - symbol:smc6 "AAA ATPase domain-c... 247 8.2e-17 1
TAIR|locus:2079107 - symbol:ATSMC2 "AT3G47460" species:37... 148 2.1e-16 3
UNIPROTKB|O93309 - symbol:smc3 "Structural maintenance of... 159 7.1e-16 2
GENEDB_PFALCIPARUM|PF11_0317 - symbol:PF11_0317 "structur... 157 1.1e-15 3
UNIPROTKB|Q8II57 - symbol:PF11_0317 "Structural maintenan... 157 1.1e-15 3
UNIPROTKB|F1SP73 - symbol:F1SP73 "Uncharacterized protein... 179 1.2e-15 4
DICTYBASE|DDB_G0284499 - symbol:smc2 "structural maintena... 158 1.3e-15 3
UNIPROTKB|E2R7R8 - symbol:SMC2 "Structural maintenance of... 156 1.3e-15 4
MGI|MGI:106067 - symbol:Smc2 "structural maintenance of c... 154 2.7e-15 3
UNIPROTKB|I3LM67 - symbol:LOC100738089 "Uncharacterized p... 203 4.8e-15 1
UNIPROTKB|O95347 - symbol:SMC2 "Structural maintenance of... 158 5.3e-15 4
UNIPROTKB|F1MY41 - symbol:SMC2 "Structural maintenance of... 155 5.3e-15 4
UNIPROTKB|D4A5Q2 - symbol:Smc2 "Structural maintenance of... 155 6.7e-15 4
RGD|1305227 - symbol:Smc2 "structural maintenance of chro... 155 7.8e-15 4
GENEDB_PFALCIPARUM|PFD0685c - symbol:PFD0685c "chromosome... 152 1.1e-14 3
UNIPROTKB|Q8I1U7 - symbol:PFD0685c "Structural maintenanc... 152 1.1e-14 3
TAIR|locus:2167973 - symbol:SMC2 "AT5G62410" species:3702... 146 2.3e-14 3
ZFIN|ZDB-GENE-030131-105 - symbol:smc2 "structural mainte... 138 1.5e-13 3
ZFIN|ZDB-GENE-030131-3196 - symbol:smc3 "structural maint... 134 3.0e-13 3
TAIR|locus:2045159 - symbol:TTN7 "AT2G27170" species:3702... 118 3.4e-13 3
UNIPROTKB|E1C610 - symbol:E1C610 "Structural maintenance ... 130 5.6e-13 3
POMBASE|SPAC10F6.09c - symbol:psm3 "mitotic cohesin compl... 134 5.7e-13 3
UNIPROTKB|Q97QG7 - symbol:smc "Chromosome partition prote... 172 7.8e-13 3
UNIPROTKB|G3N365 - symbol:SMC3 "Structural maintenance of... 135 9.7e-13 3
FB|FBgn0027783 - symbol:SMC2 "SMC2" species:7227 "Drosoph... 132 1.0e-12 2
SGD|S000001927 - symbol:SMC2 "Subunit of the condensin co... 137 1.3e-12 3
UNIPROTKB|Q90988 - symbol:SMC2 "Structural maintenance of... 129 1.9e-12 3
UNIPROTKB|A7Z065 - symbol:SMC3 "Structural maintenance of... 132 2.0e-12 3
UNIPROTKB|E2R7T4 - symbol:SMC3 "Uncharacterized protein" ... 132 2.0e-12 3
UNIPROTKB|Q9UQE7 - symbol:SMC3 "Structural maintenance of... 132 2.0e-12 3
UNIPROTKB|Q5R4K5 - symbol:SMC3 "Structural maintenance of... 132 2.0e-12 3
MGI|MGI:1339795 - symbol:Smc3 "structural maintenance of ... 132 2.0e-12 3
UNIPROTKB|D4A1B9 - symbol:Smc3 "Structural maintenance of... 132 2.0e-12 3
UNIPROTKB|O97594 - symbol:SMC3 "Structural maintenance of... 132 2.0e-12 3
WB|WBGene00010056 - symbol:smc-6 species:6239 "Caenorhabd... 141 2.4e-12 3
UNIPROTKB|E1C614 - symbol:E1C614 "Uncharacterized protein... 133 3.3e-12 3
TIGR_CMR|CHY_1443 - symbol:CHY_1443 "chromosome segregati... 165 3.5e-12 3
UNIPROTKB|F1NEA6 - symbol:SMC3 "Uncharacterized protein" ... 134 5.0e-12 3
UNIPROTKB|E2QRT5 - symbol:SMC1B "Structural maintenance o... 132 6.8e-12 3
SGD|S000004375 - symbol:SMC6 "Component of the SMC5-SMC6 ... 150 1.0e-11 3
UNIPROTKB|F1NDN4 - symbol:SMC4 "Structural maintenance of... 138 1.1e-11 4
UNIPROTKB|E1C612 - symbol:E1C612 "Uncharacterized protein... 131 1.2e-11 3
UNIPROTKB|F1P3C6 - symbol:SMC4 "Structural maintenance of... 138 1.2e-11 4
UNIPROTKB|E1C782 - symbol:E1C782 "Uncharacterized protein... 126 1.3e-11 3
UNIPROTKB|F1NYB2 - symbol:SMC3 "Uncharacterized protein" ... 134 1.3e-11 3
ZFIN|ZDB-GENE-090506-9 - symbol:smc1a "structural mainten... 132 1.6e-11 4
WB|WBGene00004873 - symbol:smc-3 species:6239 "Caenorhabd... 135 2.3e-11 3
WARNING: Descriptions of 296 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2146107 [details] [associations]
symbol:SMC5 "AT5G15920" species:3702 "Arabidopsis
thaliana" [GO:0005524 "ATP binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;ISS] [GO:0007059 "chromosome segregation"
evidence=ISS] [GO:0007062 "sister chromatid cohesion" evidence=IMP]
[GO:0009506 "plasmodesma" evidence=IDA] [GO:0010267 "production of
ta-siRNAs involved in RNA interference" evidence=RCA] [GO:0035196
"production of miRNAs involved in gene silencing by miRNA"
evidence=RCA] [GO:0051607 "defense response to virus" evidence=RCA]
InterPro:IPR027131 InterPro:IPR003395 Pfam:PF02463 GO:GO:0009506
EMBL:CP002688 EMBL:AL391145 GO:GO:0007062 PANTHER:PTHR19306:SF1
OMA:GMDPRNE IPI:IPI00520383 PIR:T51375 RefSeq:NP_197096.1
UniGene:At.31737 ProteinModelPortal:Q9LFS8 SMR:Q9LFS8 STRING:Q9LFS8
PRIDE:Q9LFS8 EnsemblPlants:AT5G15920.1 GeneID:831449
KEGG:ath:AT5G15920 TAIR:At5g15920 HOGENOM:HOG000006187
InParanoid:Q9LFS8 PhylomeDB:Q9LFS8 ProtClustDB:CLSN2686110
ArrayExpress:Q9LFS8 Genevestigator:Q9LFS8 Uniprot:Q9LFS8
Length = 1053
Score = 3542 (1251.9 bits), Expect = 0., P = 0.
Identities = 695/1048 (66%), Positives = 815/1048 (77%)
Query: 5 RVKRLKVSRGEDDYMPGNIIEIELHNFMTFDHLICKPGSRLNLVIGPNGSGKSSLVCAIA 64
R KR K+SRGEDD++PGNIIEIELHNFMTF+HL+CKPGSRLNLVIGPNGSGKSSLVCAIA
Sbjct: 5 RAKRPKISRGEDDFLPGNIIEIELHNFMTFNHLVCKPGSRLNLVIGPNGSGKSSLVCAIA 64
Query: 65 LALGGDTQLLGRATSIGAYVKRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNG 124
L LGG+ QLLGRATS+GAYVKRGE+SGY+KISLRG+T+EE+LTI RKIDTRNKSEW FNG
Sbjct: 65 LCLGGEPQLLGRATSVGAYVKRGEDSGYVKISLRGNTREENLTIFRKIDTRNKSEWMFNG 124
Query: 125 KVVPKGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHC 184
V K +++EI ++FNIQVNNLTQFLPQDRVCEFAKL+PV+LLEETEKAVGDPQLPV H
Sbjct: 125 STVSKKDIVEIIQKFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLPVHHR 184
Query: 185 ALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWL 244
ALVEKS LK +E V +NG+TLNQLKAL EQEKDVERVRQR L KV+SMKKKLPWL
Sbjct: 185 ALVEKSRDLKQLERAVAKNGETLNQLKALVDEQEKDVERVRQRELFLTKVDSMKKKLPWL 244
Query: 245 KYDMKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINE 304
KYDMKKAEY+ L+ +PIE +K+EKA D CKK+ +L++
Sbjct: 245 KYDMKKAEYMDAKKRMKEAEKKLDEAAKNLNSMKEPIEKQKKEKAETDSKCKKVKNLMDA 304
Query: 305 NSKRRMDFLEKVDQG-VQVQGKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPAY 363
N + R LEK D+ +V YK ILKA Q +P Y
Sbjct: 305 NGRNRCHLLEKEDEADARVVATYKELEELKKQEEHRQERILKATEDLVAAERELQNLPVY 364
Query: 364 EPPHDKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLL 423
E P K+E+L SQ+ EL N K+ QK + EK+L+Q + TLRQC D+LKDME+ NNKLL
Sbjct: 365 ERPVAKLEELSSQVTELHHSINGKKNQKEDNEKLLSQKRYTLRQCVDKLKDMENANNKLL 424
Query: 424 HALRNSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLEDHVGHYIWKSF 483
AL NSGA+ IF+AY W+QQ+RHE +E YGPVL+EVNV NR +A +LE HV YIWKSF
Sbjct: 425 KALANSGADRIFDAYQWVQQNRHEFKREVYGPVLVEVNVPNRENACFLEGHVSFYIWKSF 484
Query: 484 ITQDAGDRDFLAKNLKPFDVPILNYVSNESSRKEPFQISEEMRALGISARLDQVFDAPHA 543
ITQD DRD L KNLK FDVP+LNYV N ++K PF IS++MR+LGI ARLDQ+FDAP A
Sbjct: 485 ITQDPEDRDLLVKNLKRFDVPVLNYVGNSGNQKAPFHISDQMRSLGIHARLDQIFDAPDA 544
Query: 544 VKEVLISQFGLDSSYIGSKETDQKADNVAKLGILDFWTPENHYRWSISRYGGHVSASVEP 603
VKEVL SQFGL+ SYIGSK TDQ+A+ V KLGI DFWTP+NHYRWS SRYGGH SASV+
Sbjct: 545 VKEVLNSQFGLEDSYIGSKITDQRAEEVYKLGIKDFWTPDNHYRWSSSRYGGHSSASVDS 604
Query: 604 VNQSRLLLCSVDGNXXXXXXXXXXXXXXXXXXXXXXXXXMQTEQRLIEDEAAKLQKEREE 663
V QSRLLLC VD +QTEQR +E+EAAKL KEREE
Sbjct: 605 VYQSRLLLCGVDVGELEKLRSRKEELEDSILFMEETHKSLQTEQRRLEEEAAKLHKEREE 664
Query: 664 IINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAADLNIQQFKYAIEI 723
I+N+ +EK+KRRE+E+ RK KLES+E+E+D++ ++AKL+DQA+ N ++ YAI +
Sbjct: 665 IVNVSYLEKKKRRELESRYQQRKTKLESLEQEEDMDASVAKLIDQASRANADRYTYAINL 724
Query: 724 KNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYEDCKKEVEHCR 783
K LLVE V+ KWSYAEKHMASIE + KIRE E N+KQ+EK A Q SL E CKKEVE +
Sbjct: 725 KKLLVEAVAHKWSYAEKHMASIELERKIRESEINIKQYEKTAQQLSLAVEYCKKEVEGKQ 784
Query: 784 KHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYE 843
+ L+ AKR AES+A ITPEL+KEF+EMPTT+EELEAAIQDN+SQANSI F+N+NILQEYE
Sbjct: 785 QRLATAKRDAESVATITPELKKEFMEMPTTVEELEAAIQDNLSQANSILFINENILQEYE 844
Query: 844 HRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEMAVAG 903
HRQ QI +STK E DK++L + EID+LKEKWLPTLR LV QINETFS NFQEMAVAG
Sbjct: 845 HRQSQIYTISTKLETDKRDLSICMKEIDSLKEKWLPTLRQLVGQINETFSHNFQEMAVAG 904
Query: 904 EVSLDEHESDFDKFGILIKVKFRQSGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPF 963
EVSLDE ++DFD++GI IKVKFR+SGQL+VLS+HHQSGGERSVSTILYLVSLQDLTNCPF
Sbjct: 905 EVSLDERDTDFDQYGIHIKVKFRESGQLQVLSSHHQSGGERSVSTILYLVSLQDLTNCPF 964
Query: 964 RVVDEINQGMDPINERKMFQQLVRAASQPNTPQCFLLTPKLLPDLEYSEACSILNIMNGP 1023
RVVDEINQGMDPINERKMFQQLVRAASQPNTPQCFLLTPKLLP+LEYSEACSILNIMNGP
Sbjct: 965 RVVDEINQGMDPINERKMFQQLVRAASQPNTPQCFLLTPKLLPELEYSEACSILNIMNGP 1024
Query: 1024 WIEQPSKVWSSGECWGTVTGLVGE-SRC 1050
+I +PSKVWS G+ WG++ E S+C
Sbjct: 1025 YIAEPSKVWSLGDSWGSLNRRRTEASQC 1052
>UNIPROTKB|D4A4D0 [details] [associations]
symbol:Smc5 "Protein Smc5" species:10116 "Rattus
norvegicus" [GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA] [GO:0030915 "Smc5-Smc6 complex"
evidence=IEA] InterPro:IPR027131 InterPro:IPR003395 Pfam:PF02463
RGD:1307492 GO:GO:0005524 GO:GO:0007059 GO:GO:0003677 GO:GO:0030261
GO:GO:0009295 PANTHER:PTHR19306:SF1 IPI:IPI00559450
Ensembl:ENSRNOT00000043125 ArrayExpress:D4A4D0 Uniprot:D4A4D0
Length = 1088
Score = 1228 (437.3 bits), Expect = 5.5e-125, P = 5.5e-125
Identities = 305/1034 (29%), Positives = 531/1034 (51%)
Query: 18 YMPGNIIEIELHNFMTFDHLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRA 77
++ G+I+ I + NF+T+D PG LN++IG NG+GKSS+VCAI L L G +GRA
Sbjct: 48 FVEGSIVRIAMENFLTYDICEVSPGPHLNMIIGANGTGKSSIVCAICLGLAGKPAFMGRA 107
Query: 78 TSIGAYVKRGEESGYIKISLRGDTKEEHLTIMRKIDT-RNKSEWFFNGKVVPKGEVLEIT 136
+G +VKRG G ++I L + +L I R+ID +N+S WF N K V + V E
Sbjct: 108 DKVGFFVKRGCSKGLVEIELFRTSG--NLIITREIDVIKNQSFWFINKKPVTQKIVEEQV 165
Query: 137 KRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTI 196
NIQV NL QFLPQD+V EFAKLS ++LLE TEK++G P++ HC L K K +
Sbjct: 166 AALNIQVGNLCQFLPQDKVGEFAKLSKIELLEATEKSIGPPEMHRYHCELKNFREKEKQL 225
Query: 197 ECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAEYIXX 256
E + K + L+++ N ++DVER +R L+ +E ++ K PW++Y+ + EY
Sbjct: 226 ETSCKEKTEYLDKMIQRNERYKQDVERFYERKRHLDLIEMLEAKRPWVEYENVRQEYEGV 285
Query: 257 XXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENS---KRRMDFL 313
++ IE ++++ L+ K+ ++ I E S K+R D +
Sbjct: 286 KLVRDRVKEEVRKLKEGQIPMTRRIEEIERQRRTLEVRIKEKATDIKEASQKCKQRQDLI 345
Query: 314 EKVDQGV-QVQGKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPAYEPPHDKIEK 372
E+ D+ + ++Q K + +P D I
Sbjct: 346 ERKDRHIKELQQALTVKQNEEQDRQKRISNTRKMIEDLQNELRTAENCENLQPQIDAITN 405
Query: 373 LGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAE 432
++ E + + K ++++L + K R SD + ++ N+ LR +
Sbjct: 406 DLRRVQEEKALCEGEIIDKQREKEMLEKQK---RSVSDHITRFDNLMNQKEDKLRQRYRD 462
Query: 433 NIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLEDHVGHYIWKSFITQDAGDRD 492
++A WL+ +R + P++L +N+ + +A Y+E+H+ ++F+ + D +
Sbjct: 463 T-YDAVLWLRNNRDRFKQRVCEPIMLTINMKDNKNAKYVENHISSNDLRAFVFESQEDME 521
Query: 493 FLAKNLKPFDVPILNYVSNES---SRKEPFQISEEMRALGISARLDQVFDAPHAVKEVLI 549
+ ++ +N V + K P + E++ G + L ++FDAP V L
Sbjct: 522 IFLREVRDNKKLRVNAVIAPKISYADKAPSRSLNELKQYGFFSYLRELFDAPDPVMSYLC 581
Query: 550 SQFGLDSSYIGSKETDQKADNVAK-LGILDFWTPENHYRWSISRYGGHVSASVEPVNQSR 608
Q+ + +G++ T ++ + V + + +T E Y S Y V +S + ++
Sbjct: 582 CQYHIHEVPVGTERTRERIERVIQETRLKQIYTAEEKYVLKTSFYSNKVISSNTSLKVAQ 641
Query: 609 LLLCSVDGNXXXXXXXXXXXXXXXXXXXXXXXXXMQTEQRLIEDEAAKLQKEREEIINIV 668
L +VD ++ R +E + +L+ +++E++
Sbjct: 642 FLTVTVDLEQRRHLEEQLKEINRKLEAVDSGLVALRDTNRHLELKDNELRLKKKELLE-- 699
Query: 669 QIEKRKRREMENHINLRKRKLESIEKED-DINTALAKLVDQAADLNIQQFKYAIEIKNLL 727
K K+R++E I+ + + +E++ ++ K + ++N+Q+ K E+ L+
Sbjct: 700 --RKTKKRQLEQKISSKLASIRLMEQDTCNLEEEERKASTKIKEINVQKAKLVTELTGLV 757
Query: 728 VEIVSCKWSYAEKHMASIEFDAKIRELEFN-LKQHEKLAL--QASLHYEDCKKEV-EHCR 783
S + + + ++ +LE + + +L + Q + +D ++ + + C+
Sbjct: 758 KICTSLHIQKVDLILQNTTVISEKNKLEADYMASSSQLRVTEQQFIELDDNRQRLLQKCK 817
Query: 784 KHLSDAKRQAESIA--FITPELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQN-ILQ 840
+ + A++ A + E + F ++P T++E++A + + S+A+ LN + +++
Sbjct: 818 ELMKRARQVCNLSADQAVPQEFQTAFQDLPNTLDEIDALLTEERSRASCFTGLNPSQVVE 877
Query: 841 EYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEMA 900
EY R+ +I+ L+ + + K EL + I +KE+WL L+ LV +INE FS F M
Sbjct: 878 EYTKREIEIQQLTEELKGKKVELDEYRENISQVKERWLNPLKELVEKINEKFSNFFSSMQ 937
Query: 901 VAGEVSLD-EHESDFDKFGILIKVKFRQSGQLEVLSAHHQSGGERSVSTILYLVSLQDLT 959
AGEV L E+E D+DK+GI I+VKFR S QL L+ HHQSGGERSVST+LYL++LQ+L
Sbjct: 938 CAGEVDLHTENEEDYDKYGIRIRVKFRSSTQLHELTPHHQSGGERSVSTMLYLMALQELN 997
Query: 960 NCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTPQCFLLTPKLLPDLEYSEACSILNI 1019
CPFRVVDEINQGMDPINER++F+ +V A + NT Q F +TPKLL +L YSE ++L +
Sbjct: 998 RCPFRVVDEINQGMDPINERRVFEMVVNTACKENTSQYFFITPKLLQNLPYSEKMTVLFV 1057
Query: 1020 MNGPWIEQPSKVWS 1033
NGP + +P++ W+
Sbjct: 1058 YNGPHMLEPNR-WN 1070
>UNIPROTKB|F1PEG5 [details] [associations]
symbol:SMC5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030915 "Smc5-Smc6 complex" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA] InterPro:IPR027131 InterPro:IPR003395
Pfam:PF02463 PANTHER:PTHR19306:SF1 GeneTree:ENSGT00550000074963
EMBL:AAEX03000569 Ensembl:ENSCAFT00000002987 Uniprot:F1PEG5
Length = 1044
Score = 1223 (435.6 bits), Expect = 1.9e-124, P = 1.9e-124
Identities = 313/1044 (29%), Positives = 538/1044 (51%)
Query: 18 YMPGNIIEIELHNFMTFDHLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRA 77
++ G+I+ I + NF+T+D PG LN++IG NG+GKSS+VCAI L L G +GRA
Sbjct: 3 FVEGSIVRIVMENFLTYDICEVSPGPHLNMIIGANGTGKSSIVCAICLGLAGKPAFMGRA 62
Query: 78 TSIGAYVKRGEESGYIKISLRGDTKEEHLTIMRKIDT-RNKSEWFFNGKVVPKGEVLEIT 136
+G +VKRG G ++I L + +L I R+ID +N+S WF N K + V E
Sbjct: 63 DKVGFFVKRGCSKGMVEIELFRTSG--NLIITREIDVAKNQSSWFINKKSTTQKVVEEQV 120
Query: 137 KRFNIQVNNLTQFLPQ--DRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLK 194
NIQV NL QFLPQ D+V EFAKLS ++LLE TEK++G P++ HC L K K
Sbjct: 121 AALNIQVGNLCQFLPQSKDKVGEFAKLSKIELLEATEKSIGPPEMHRYHCELKNFREKEK 180
Query: 195 TIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAEYI 254
+E + K + L ++ N ++DVER +R L+ +E ++ K PW++Y+ + EY
Sbjct: 181 QLETSCKEKTEYLEKMIQRNERYKQDVERFYERKRHLDLIEMLEAKRPWVEYENVRQEYE 240
Query: 255 XXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENS---KRRMD 311
++ IE ++++ L+ K+ ++ I E S K++ D
Sbjct: 241 EVKLARDRVKEEVRKLKEGQIPMTRRIEEIERQRHTLEARIKEKATDIKETSQKCKQKQD 300
Query: 312 FLEKVDQGVQVQGKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPAYEPPHDKIE 371
+E+ D+ Q++ + I R +T E +I+
Sbjct: 301 IIERKDK--QIEELQQALTVKQNEEHDRQRRISNTRKMIEDLQNELKTTENCENLQPQID 358
Query: 372 KLGSQILELGVQANQKRL-------QKSEKEKILNQNKLTLRQCSDRLKD-MEDKNNKLL 423
+ + + VQ ++K L ++ EKE + + K ++ R + M K +KL
Sbjct: 359 AITNDLRR--VQ-DEKALCEGEVIDKRGEKESLEKERK-SVGDNIVRFDNLMNQKEDKLR 414
Query: 424 HALRNSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLEDHVGHYIWKSF 483
R++ ++A WL+ +R + + P++L +N+ + +A Y+E+H+ ++F
Sbjct: 415 QRYRDT-----YDAVLWLRNNRDKFKQRVCEPIMLTINMKDNKNAKYIENHISSNDLRAF 469
Query: 484 ITQDAGDRDFLAKNLKPFDVPILNYV-SNESSR--KEPFQISEEMRALGISARLDQVFDA 540
+ + D + K ++ +N V + +SS K P + E++ G + L ++FDA
Sbjct: 470 VFESQEDMEIFLKEIRDNKKLRVNAVIAPKSSYADKAPSRSLNELKPYGFFSYLRELFDA 529
Query: 541 PHAVKEVLISQFGLDSSYIGSKETDQKADNVAK-LGILDFWTPENHYRWSISRYGGHVSA 599
P V L + + +G++ T ++ + V + + +T E Y S Y V +
Sbjct: 530 PDPVMSFLCCHYHIHEVPVGTERTRERIERVIQETRLKQMYTAEEKYVVKTSFYSNKVIS 589
Query: 600 SVEPVNQSRLLLCSVDGNXXXXXXXXXXXXXXXXXXXXXXXXXMQTEQRLIEDEAAKLQK 659
S + ++ L +VD + + +E + +L++
Sbjct: 590 SNTSLKVAQFLTVTVDLEQRRHLEEQLKEINRKLQAVEAGLIALCERNKHLEHKDNELRQ 649
Query: 660 EREEIINIVQIEKRKRREMENHINLRKRKLESIEKED-DINTALAKLVDQAADLNIQQFK 718
+++E++ K K+R++E I+ + L+ +E++ ++ K + ++N+Q+ K
Sbjct: 650 KKKELLE----RKTKKRQLEQKISSKLGSLKLMEQDTCNLEEEERKASTKIKEINVQKAK 705
Query: 719 YAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFN-LKQHEKLALQASLHYEDCKK 777
E+ N + S + + + ++ +LE + + +L + Y+
Sbjct: 706 LVTELTNFVKICTSLHIQKVDLILQNTTVISEKNKLESDYMAASSQLRITEKSKYDGLLD 765
Query: 778 E-----VEHCRKHLSDAKRQAESIAFIT-P-ELEKEFLEMPTTIEELEAAIQDNISQANS 830
E ++ C++ + A++ A T P E + F ++P T++E++A + + S+A+
Sbjct: 766 ESRQRLLQKCKELMKRARQVCNLGAEQTVPQEYQTAFQDLPNTLDEIDALLTEERSRASC 825
Query: 831 IFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLVAQINE 890
LN +++EY R+ +IE L+ + + K EL ++ I +KE+WL L+ LV +INE
Sbjct: 826 FTGLNPTVVEEYTKREEEIEQLTEELKIKKVELDKYRENISQVKERWLNPLKELVEKINE 885
Query: 891 TFSRNFQEMAVAGEVSLD-EHESDFDKFGILIKVKFRQSGQLEVLSAHHQSGGERSVSTI 949
FS F M AGEV L E+E D+DK+GI I+VKFR S QL L+ HHQSGGERSVST+
Sbjct: 886 KFSNFFSSMQCAGEVDLHTENEEDYDKYGIRIRVKFRSSTQLHELTPHHQSGGERSVSTM 945
Query: 950 LYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTPQCFLLTPKLLPDLE 1009
LYL++LQ+L CPFRVVDEINQGMDPINER++F+ +V A + NT Q F +TPKLL +L
Sbjct: 946 LYLMALQELNRCPFRVVDEINQGMDPINERRVFEMVVNTACKENTSQYFFITPKLLQNLP 1005
Query: 1010 YSEACSILNIMNGPWIEQPSKVWS 1033
YSE ++L + NGP + +P++ W+
Sbjct: 1006 YSEKMTVLFVYNGPHMLEPNR-WN 1028
>DICTYBASE|DDB_G0290919 [details] [associations]
symbol:smc5 "AAA ATPase domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0030915 "Smc5-Smc6
complex" evidence=IEA;ISS] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR027131 InterPro:IPR003395 dictyBase:DDB_G0290919
Pfam:PF02463 GO:GO:0005634 GenomeReviews:CM000154_GR GO:GO:0046982
eggNOG:COG1196 GO:GO:0030915 EMBL:AAFI02000172
PANTHER:PTHR19306:SF1 RefSeq:XP_635479.1 ProteinModelPortal:Q54FE3
EnsemblProtists:DDB0231142 GeneID:8627895 KEGG:ddi:DDB_G0290919
InParanoid:Q54FE3 OMA:ILERNEM ProtClustDB:CLSZ2728770
Uniprot:Q54FE3
Length = 1131
Score = 1208 (430.3 bits), Expect = 7.2e-123, P = 7.2e-123
Identities = 314/1043 (30%), Positives = 518/1043 (49%)
Query: 17 DYMPGNIIEIELHNFMTFDHLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGR 76
+++ G+I+ I+L+NF+T+ + +PG RLN++IGPNGSGKSS+VCAIAL LGG LLGR
Sbjct: 64 EFVNGSIVRIKLNNFVTYSDVEFRPGPRLNVIIGPNGSGKSSIVCAIALGLGGGPNLLGR 123
Query: 77 ATSIGAYVKRGEESGYIKISLRGDTKEEHLTIMRKIDTR-NKSEWFFNGKVVPKGEVLEI 135
+G ++K GYI+I L ++ + ++ I R + N SE+ NGK + K +++
Sbjct: 124 QKQLGDFIKNRCSQGYIEIELHNESGDNYI-IRRDLKKEGNGSEFHINGKSISKNDLITT 182
Query: 136 TKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKT 195
K+ N+QV+NL QFLPQD+V FA +SP +LL ETEKA+ + H L+ S +
Sbjct: 183 IKKLNVQVDNLCQFLPQDKVVSFASMSPTELLIETEKAININNMYENHQELIRLQSNHQK 242
Query: 196 IECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAEYIX 255
T + L+ L N EKDV++ R+R +LLE V+ +K+K W ++ + +I
Sbjct: 243 ESTTFEELKKNLDDLVKKNQSLEKDVDKFRERQKLLEFVDKLKRKRTWAIFENARVAFIK 302
Query: 256 XXXXXXXXXXXXXXXXNTLHEFSKPIEGK-----KQEKAILDGDCK------KLSSLINE 304
+ L F I + K K + D K ++S L
Sbjct: 303 ARDDKELAEKTVQHGESQLKPFKSIISEQTKSIEKSRKEVHDNSTKVQQTESEVSRLSLT 362
Query: 305 NSKRRM---DFLEKVDQGVQVQGKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVP 361
+ K + +FL ++D G+Q + K + I + Q +P
Sbjct: 363 DGKLVIVVENFLAEID-GIQQRDKERKVQ------------IARVTKDIQDETTKMQRLP 409
Query: 362 AYEPPHDKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNN- 420
E +EKL ++ + Q + ++K K + N + ++C+ ++M NN
Sbjct: 410 NDEDTKRNVEKLNRELKDCNQQLGELEIEKEAKNRQFN---MINQECTSIQREMSQLNNI 466
Query: 421 --KLLHALRNSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLEDHVGHY 478
+ L LRN +++ AY WL+Q+++ ++ +GP+ +E+NV N HA +LE +
Sbjct: 467 QAQKLEFLRND-QRDVYSAYEWLRQNQNLFKQKVFGPICMEINVQNPEHAAFLEMTLSFN 525
Query: 479 IWKSFITQDAGDRDFLAKNL--KPFDVPILNYVSNESSRKEPFQISEEMRALGISARLDQ 536
+ +F+ Q DR+ N+ + + VS + E E+ R++G + LD+
Sbjct: 526 LMMTFVFQSMEDRETFHSNIIDNGKKLRVNTLVSRGGFKMERVNNIEDFRSIGATHYLDE 585
Query: 537 VFDAPHAVKEVLISQFGLDSSYIGSKETDQKADNVAKLGILDFWTPENHYRWSISRYGGH 596
F+A VK ++ + S + + D + K I F+TP Y + SRYG
Sbjct: 586 TFEADQVVKNAIMDSIPIFKSIVFDRRALNNEDTITK-HINSFFTPNGSYYTTYSRYGDR 644
Query: 597 VSASVEPVNQSRLLLCSVDGNXXXXXXXXXXXXXXXXXXXXXXXXXMQTEQRLIEDEAAK 656
+ + L ++ ++ +Q I
Sbjct: 645 KPTTRVSNFKVAKWLSGINTGKKDELQEKFRQAKVRLDQERLSAEEIRQKQNQITATQRN 704
Query: 657 LQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAADLNIQQ 716
+ +ER + + RR+ + I RKLE + E++I K+ + ++ ++
Sbjct: 705 ITEERNKCNATID----DRRKCYSRIQFLARKLEELNTEENIEEEEKKIRQKLREVYAKR 760
Query: 717 FKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQAS-LHYEDC 775
EI + L + S + +AK+R E +L + E L+A +
Sbjct: 761 ADTLSEITDKLRDYFKHMGSRDHTLITLSRLEAKLRSEEDSLAR-ESAKLEADKTRLAEL 819
Query: 776 KKEVEHCRKHLSDAKRQAESIAF-ITPELEKEFLEMPT-TIEELEAAIQDNISQANSIFF 833
K + C K K +AE I +T E+++EF + ++EE++ I ++AN I
Sbjct: 820 VKYFDDCVKEAKRLKSEAEKIVGPLTLEVQEEFKSISFHSLEEIDREISATETKANFIIS 879
Query: 834 LNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLVAQINETFS 893
N +L+EYE R+R+I+ + + ++EL+ + L+E WL ++ ++Q+N +FS
Sbjct: 880 NNPKVLEEYEGRKREIQVIEDRISFRQRELQDNDKRMGRLREDWLVPVKEFISQVNTSFS 939
Query: 894 RNFQEMAVAGEVSL--DE-HESDFDKFGILIKVKFRQSGQLEVLSAHHQSGGERSVSTIL 950
+ F+ + GEV L DE H D+ K+ + I+VKFR L+ L+A QSGGERSVST+L
Sbjct: 940 QYFKAINCLGEVHLGFDEQHPDDYSKYFVDIRVKFRNEDSLKTLNAQLQSGGERSVSTML 999
Query: 951 YLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTPQCFLLTPKLLPDLEY 1010
YL+SLQDLT CPFRVVDEINQGMDP NER +F+Q+V++ S +PQ FL+TPKLL +L Y
Sbjct: 1000 YLISLQDLTTCPFRVVDEINQGMDPKNERMIFEQIVKSVSSEGSPQYFLITPKLLHNLHY 1059
Query: 1011 SEACSILNIMNGPWIEQPSKVWS 1033
S ++L + GPW K W+
Sbjct: 1060 SPETTVLCVFTGPWF-MSQKQWN 1081
>ZFIN|ZDB-GENE-061013-288 [details] [associations]
symbol:smc5 "structural maintenance of chromosomes
5" species:7955 "Danio rerio" [GO:0000724 "double-strand break
repair via homologous recombination" evidence=IEA] [GO:0030915
"Smc5-Smc6 complex" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] InterPro:IPR027131 ZFIN:ZDB-GENE-061013-288 CTD:23137
PANTHER:PTHR19306:SF1 GeneTree:ENSGT00550000074963 EMBL:BX640501
IPI:IPI00997922 RefSeq:NP_001180470.1 UniGene:Dr.75528
Ensembl:ENSDART00000122170 GeneID:566749 KEGG:dre:566749
NextBio:20888355 Uniprot:E7F0W1
Length = 1073
Score = 1199 (427.1 bits), Expect = 6.5e-122, P = 6.5e-122
Identities = 309/1040 (29%), Positives = 528/1040 (50%)
Query: 15 EDDYMPGNIIEIELHNFMTFDHLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLL 74
E D+M G I+ I +HNF+T+DH PG +LN+++G NG+GKSS+VCAI L L G T +L
Sbjct: 34 EGDFMEGAIVRITMHNFLTYDHSEVFPGPKLNMIVGANGTGKSSIVCAICLGLAGKTSVL 93
Query: 75 GRATSIGAYVKRGEESGYIKISLRGDTKEEHLTIMRKIDTRN-KSEWFFNGKVVPKGEVL 133
GR +G YVKRG + G ++I L T+ +L + R+I N +S W N K + V
Sbjct: 94 GRGDKVGLYVKRGCQRGSVEIELYR-TRG-NLIVTREIQVENNQSTWMLNKKHASQKAVE 151
Query: 134 EITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKL 193
E + +IQV NL QFLPQ++V EFAK+S +LLE TEK+VG P++ HC L +K
Sbjct: 152 EAVRELHIQVGNLCQFLPQEKVGEFAKMSNSELLEATEKSVGPPEMYEFHCELKTFRTKE 211
Query: 194 KTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAEY 253
+ +E K G+ L + + N + DVER + L++++ ++KK PW++Y+ + E
Sbjct: 212 RDLENVCKEKGNFLEKARQRNERNKLDVERYYMKKRHLDRIQMLEKKKPWVEYETARKEL 271
Query: 254 IXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENS---KRRM 310
+ I + E ++ K++++ I E + K++
Sbjct: 272 EGVKKERDEMKRKLRFLKEAQEPLLRKIRSVESELQPIEQQMKEMTNRIKEATQKCKQKH 331
Query: 311 DFLEKVDQGVQVQGKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPAYEPPHDKI 370
D LE ++ +V + I + Q + E +I
Sbjct: 332 DQLELKNK--EVDDIKQDMSLKQTEEADRQKRIGHTQLMIRDLQKELQNMGTIEDVTPQI 389
Query: 371 EKLGSQILELGVQANQKRLQKSEKEKILNQNKLT--LRQCSDRLKDMEDKNNKLLHALRN 428
E + +++ +Q + RL+ + +++++T + +RL+ ++D LR
Sbjct: 390 EAINAELRN--IQEERARLESESLDLRRDKDEITGEFARLQNRLRSLDDMMKIKEEKLR- 446
Query: 429 SGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLEDHVGHYIWKSFITQDA 488
S + + A WL+++R + P++L +NV + HA Y+E H+ ++F+ Q
Sbjct: 447 SRFRDTYTALEWLRKNRDRYEGVVHEPMMLVINVRDARHAKYIETHISVNDLRAFVFQRQ 506
Query: 489 GDRDFLAKNLKPFDVPILNYV--SNES-SRKEPFQISEEMRALGISARLDQVFDAPHAVK 545
D D ++ +N + ES S++ P + E ++ G + L ++FDAP V
Sbjct: 507 DDNDKFMNEMRDTQRLRVNSIIAPTESCSKRPPSRPIETLKPYGFISYLREMFDAPEEVM 566
Query: 546 EVLISQFGLDSSYIGSKETDQKADNVAK-LGILDFWTPENHYRWSISRYGGHVSASVEPV 604
L Q+ ++ IG+++T ++V K L + +T E Y S Y +V +S +
Sbjct: 567 SYLCHQYRVNDVPIGTEKTKGMIESVIKDLQLRTIYTAEERYNVKKSAYSNNVVSSNSAL 626
Query: 605 NQSRLLLCSVDGNXXXXXXXXXXXXXXXXXXXXXXXXXMQTEQRLIEDEAAKLQKEREEI 664
+ L ++D ++ +Q ++ +L+ ++++
Sbjct: 627 RPPQFLTTTIDVEERRQLEEQLRAAERQKQSIDQRMAAIREQQANLDRRDNELRANKKKL 686
Query: 665 INIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAADLNIQQFKYAIEIK 724
++ K K+R++E I+ ++ L +E +++IN + A + K I +
Sbjct: 687 SDL----KSKKRQLEQKISTKQDSLRQME-QNEINLVAIEEEANAKIAAVNNKKVTI-MG 740
Query: 725 NLLVEIVSCKWSYAEK-HMA--SIEFDAKIRELEFNLKQHEKLALQASLHYEDCKKEVEH 781
L + S EK ++A S A+ +LE ++++ +A + Y K +
Sbjct: 741 EYLSHLQSKARLNMEKVYLALQSAGLSAEKTKLETDVRESSAELKRAEVDYTKLDKIKTN 800
Query: 782 CRKHLSDAKRQAESIAFITP-------ELEKEFLEMPTTIEELEAAIQDNISQANSIFFL 834
++A I +TP EL F +P T++E++A + + ++A L
Sbjct: 801 LLMTCKTLMKRASEICNMTPGETAVPEELHAAFSLLPETLDEIDAMLNEERTRAECFTGL 860
Query: 835 NQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLVAQINETFSR 894
+ ++ EY R+++I++L + + EL + I KE+WL L+ LV IN FS
Sbjct: 861 SDAVVDEYNRREQEIKNLEKELDDKTNELTTYRRNIAEAKERWLNPLKKLVELINVRFSD 920
Query: 895 NFQEMAVAGEVSL-DEHESDFDKFGILIKVKFRQSGQLEVLSAHHQSGGERSVSTILYLV 953
FQ M AGEV L E+E ++DK+GI I+V+FR++ ++ L+ HHQSGGERSV+T+LYL+
Sbjct: 921 FFQSMQCAGEVDLHSENEEEYDKYGIRIQVQFRRNTRMHELTPHHQSGGERSVTTMLYLM 980
Query: 954 SLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTPQCFLLTPKLLPDLEYSEA 1013
SLQ+L CPFRVVDEINQGMDP+NER++F +VRAA NT Q F +TPKLL +L+Y+E
Sbjct: 981 SLQELNRCPFRVVDEINQGMDPVNERRVFDIVVRAACGVNTSQYFFITPKLLQNLQYAEQ 1040
Query: 1014 CSILNIMNGPWIEQPSKVWS 1033
+IL + NGP + P+K W+
Sbjct: 1041 MTILCVHNGPQMLPPNK-WN 1059
>UNIPROTKB|Q5ZJY5 [details] [associations]
symbol:SMC5 "Structural maintenance of chromosomes protein
5" species:9031 "Gallus gallus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0005634 "nucleus" evidence=ISS]
[GO:0030915 "Smc5-Smc6 complex" evidence=ISS] [GO:0000724
"double-strand break repair via homologous recombination"
evidence=ISS] [GO:0000722 "telomere maintenance via recombination"
evidence=ISS] [GO:0000781 "chromosome, telomeric region"
evidence=ISS] [GO:0016605 "PML body" evidence=ISS] [GO:0090398
"cellular senescence" evidence=ISS] [GO:0034184 "positive
regulation of maintenance of mitotic sister chromatid cohesion"
evidence=ISS] [GO:0045842 "positive regulation of mitotic
metaphase/anaphase transition" evidence=ISS] InterPro:IPR027131
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0051301
GO:GO:0007067 GO:GO:0016605 GO:GO:0000724 GO:GO:0000781
GO:GO:0000722 GO:GO:0090398 GO:GO:0045842 eggNOG:COG1196
GO:GO:0030915 GO:GO:0034184 EMBL:AJ720299 EMBL:AJ851554
IPI:IPI00587679 RefSeq:NP_001034424.1 UniGene:Gga.2365
ProteinModelPortal:Q5ZJY5 STRING:Q5ZJY5 GeneID:431608
KEGG:gga:431608 CTD:23137 HOGENOM:HOG000154342 HOVERGEN:HBG093963
InParanoid:Q5ZJY5 OrthoDB:EOG4VMFDP NextBio:20830893
PANTHER:PTHR19306:SF1 Uniprot:Q5ZJY5
Length = 1065
Score = 1129 (402.5 bits), Expect = 1.7e-114, P = 1.7e-114
Identities = 310/1049 (29%), Positives = 525/1049 (50%)
Query: 14 GEDDYMPGNIIEIELHNFMTFDHLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQL 73
G+ + G+I+ I + NF+T+D +PG LN++IG NG+GKSS+VCAI L L G
Sbjct: 23 GKPRSVEGSIVRIYMENFLTYDICEVRPGPNLNMIIGANGTGKSSIVCAICLGLAGKPSF 82
Query: 74 LGRATSIGAYVKRGEESGYIKISLRGDTKEEHLTIMRKIDT-RNKSEWFFNGKVVPKGEV 132
LGRA +G +VK+G G ++I L E++ I R+I N S W N K+ V
Sbjct: 83 LGRAEKVGLFVKQGCLKGLVEIELF--KVPENIIITREIQVVTNTSTWHINRKLTTLKTV 140
Query: 133 LEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSK 192
E NIQV+NL QFLPQD+V EFA++S ++LLE TEK++G P++ HC L K
Sbjct: 141 EEQVAALNIQVDNLCQFLPQDKVGEFARMSKIELLEATEKSIGPPEMYQFHCKLKSLKEK 200
Query: 193 LKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAE 252
+ +E K ++L ++K ++DV+R + L+ ++ +++K PW++Y+ + +
Sbjct: 201 ERELENVCKDKVNSLEKMKQRAERYKQDVDRYHECKRHLDLIDMLQRKRPWVEYETVRQQ 260
Query: 253 YIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQE-KAILDGDCKKLSSL------INEN 305
+ L E P+ K +E + + K+ + +++
Sbjct: 261 H----EDVKQRRDQAKEELKNLKEMQSPLTKKIRECEEFYNSLNMKIKNTADEIKGVSQK 316
Query: 306 SKRRMDFLEKVDQGVQVQGKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPAYEP 365
K + D LE D+ Q+ + IL A TV E
Sbjct: 317 CKEKQDALEMKDK--QISEINQALRMKKDEEVDRKKKILSAYKMIDEWNNELNTVTDCEN 374
Query: 366 PHDKIEKLGSQILELGVQ-AN-QKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNN--K 421
+I+ + +++ + + AN + EKI NQ + R DR+ + NN K
Sbjct: 375 LQPQIDAVNNELKHVQEERANIDSDIGDVTTEKI-NQERENGR-IIDRIGQL---NNIIK 429
Query: 422 LLHALRNSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLEDHVGHYIWK 481
+ + + A WL++++H+ KE P++L +NV + HA Y+E+H+ K
Sbjct: 430 VKEETLQARFRDTHSALMWLRKNKHKFKKEVCEPMMLTINVKDNKHAKYVENHISTNDMK 489
Query: 482 SFITQDAGDRDFLAKNLKPFDVPILNYV-SNESSRKE--PFQISEEMRALGISARLDQVF 538
+F+ + D + L+ +N V + + S E P EE+ G + L ++F
Sbjct: 490 AFVFESQEDMELFLVELRDRQKLRVNAVCAPDKSCAETLPSTPIEELHRYGFFSYLRELF 549
Query: 539 DAPHAVKEVLISQFGLDSSYIGSKETDQKADNVAK-LGILDFWTPENHYRWSISRYGGHV 597
DAP V L SQ+ + +G+++T + V K + +T E Y +S Y +
Sbjct: 550 DAPLPVMSYLCSQYHVHEVPVGTEKTRNMIERVIKETKLKQIYTAEEKYTIKVSTYT-KL 608
Query: 598 SASVEP-VNQSRLLLCSVDGNXXXXXXXXXXXXXXXXXXXXXXXXXMQTEQRLIEDEAAK 656
S S + ++ L VD + + Q+ +E +
Sbjct: 609 SFSTNMCLRPAQFLNYYVDTDERRQLENQQQNIKHILQSLDKQLMTLCERQKHLECRDNE 668
Query: 657 LQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAA----DL 712
L+++++E++ +R+++E+ I ++ + +E ++ IN L K QA +
Sbjct: 669 LRQQKKELLE----RGSRRKQLESKIAVKYDSIRQLE-QNPIN--LEKESQQAKVKIRAI 721
Query: 713 NIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQAS--- 769
NIQ+ K E+ + VS A+ + S DA+ LE K + L+AS
Sbjct: 722 NIQKAKLVTELMCHIKNYVSLNICKADLILQSTAVDAEKNRLEAEYKA-ASVELRASEQR 780
Query: 770 -LHYEDCKKEV-EHCRKHLSDAKRQAESIA--FITPELEKEFLEMPTTIEELEAAIQDNI 825
L ++ K+ + E+C++ L A++ + E + F +P T+EE++A + +
Sbjct: 781 FLELDERKRILTENCKELLKKARQMCNMNLDQHLPKEFQTAFQTLPDTLEEIDAFLNEER 840
Query: 826 SQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLV 885
S+ + L+ ++++E + +I+ L E +KKEL + I +KE+WL L+ ++
Sbjct: 841 SRVSCFTGLSASVVEECSKQMEEIQKLMESIEENKKELDDYKQSISKIKERWLNPLKKMI 900
Query: 886 AQINETFSRNFQEMAVAGEVSLD-EHESDFDKFGILIKVKFRQSGQLEVLSAHHQSGGER 944
INE FS F M GEV L E+E ++DK+GI I+VKF L L+ +HQSGGE+
Sbjct: 901 ESINEKFSGFFSSMESVGEVDLHVENEEEYDKYGIRIRVKFHNFTDLHELTPYHQSGGEK 960
Query: 945 SVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTPQCFLLTPKL 1004
SVST+LYL++LQ+L CPFRVVDEINQGMDP+NER++F+ V+ A + +T Q FL+TPKL
Sbjct: 961 SVSTVLYLMALQELNRCPFRVVDEINQGMDPVNERRVFEMFVKTACKESTSQYFLITPKL 1020
Query: 1005 LPDLEYSEACSILNIMNGPWIEQPSKVWS 1033
L +L Y+E ++L + NGP++ + +K W+
Sbjct: 1021 LQNLTYNEKMTLLFVYNGPFMLEANK-WN 1048
>UNIPROTKB|Q805A1 [details] [associations]
symbol:smc5 "Structural maintenance of chromosomes protein
5" species:8355 "Xenopus laevis" [GO:0000722 "telomere maintenance
via recombination" evidence=ISS] [GO:0000724 "double-strand break
repair via homologous recombination" evidence=ISS] [GO:0000781
"chromosome, telomeric region" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0016605 "PML body" evidence=ISS] [GO:0030915
"Smc5-Smc6 complex" evidence=ISS] [GO:0034184 "positive regulation
of maintenance of mitotic sister chromatid cohesion" evidence=ISS]
[GO:0045842 "positive regulation of mitotic metaphase/anaphase
transition" evidence=ISS] [GO:0090398 "cellular senescence"
evidence=ISS] InterPro:IPR027131 GO:GO:0005524 GO:GO:0007059
GO:GO:0051301 GO:GO:0007067 GO:GO:0003677 GO:GO:0016605
GO:GO:0000724 GO:GO:0030261 GO:GO:0000781 GO:GO:0000722
GO:GO:0090398 GO:GO:0009295 GO:GO:0045842 GO:GO:0030915
GO:GO:0034184 CTD:23137 HOVERGEN:HBG093963 PANTHER:PTHR19306:SF1
EMBL:AB103030 RefSeq:NP_001082472.1 UniGene:Xl.19399
ProteinModelPortal:Q805A1 PRIDE:Q805A1 GeneID:398492
KEGG:xla:398492 Xenbase:XB-GENE-953075 Uniprot:Q805A1
Length = 1065
Score = 1109 (395.4 bits), Expect = 2.2e-112, P = 2.2e-112
Identities = 296/1057 (28%), Positives = 528/1057 (49%)
Query: 8 RLKVSRGED--DYMPGNIIEIELHNFMTFDHLICKPGSRLNLVIGPNGSGKSSLVCAIAL 65
+L + R E + + G+I+ I++ NF+T+D PG LN+++G NG+GKSS+VCAI L
Sbjct: 14 KLLLGRQEHHRNLVEGSIVRIKMENFLTYDQCEVFPGPYLNMIVGANGTGKSSIVCAICL 73
Query: 66 ALGGDTQLLGRATSIGAYVKRGEESGYIKISLRGDTKEEHLTIMRKIDT-RNKSEWFFNG 124
L G T +GRA +G YVKRG + G++++ L + ++ I R+I N+S W+ N
Sbjct: 74 GLAGKTAFIGRADKVGFYVKRGCQKGFVELELYKTSG--NVIIKREIQVANNQSVWYINH 131
Query: 125 KVVPKGEVLEITKRFNIQVNNLTQFLPQDRVC--EFAKLSPVKLLEETEKA-VGDP---Q 178
K V E NIQV NL +P R EFA LS ++ ++ K VG P Q
Sbjct: 132 KSATLKTVEEQVPALNIQVGNLCP-IPATRTKFGEFANLSKIETSKKQLKNHVGTPRNVQ 190
Query: 179 LPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMK 238
+P++ + E + K + K + L +L N ++DVER Q+ +K++ ++
Sbjct: 191 VPLR---IEELHGEKKELAGACKSKAEFLEKLNQRNERYKQDVERYYQQKRHQDKIDMLE 247
Query: 239 KKLPWLKYDMKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKL 298
+K PW++Y+ + +Y ++ I+ ++ + I+D K
Sbjct: 248 RKRPWVEYENVRQQYEDVKKSCGNFKDELKKLQGLQAPLNQKIQQIEKRQRIIDEKIKDK 307
Query: 299 SSLINE---NSKRRMDFLEKVDQGVQ-VQGKYKXXXXXXXXXXXXXXXILKARXXXXXXX 354
+ I E N K++ D LE+ D+ ++ VQ + I K
Sbjct: 308 AIEIKETSKNCKQKQDELEQKDKQIEEVQQSLRVKRDAEQERQKKIGNIRKMIEDWEKEL 367
Query: 355 XXXQTVPAYEPPHDKIEKLGSQILE--LGVQANQKRLQKSEKEKILNQNKLTLRQCSDRL 412
+P D I +I + +++ L + EK+ + + K + ++R+
Sbjct: 368 SAMTNQENIQPEMDSINTDFRRIQDDKANIESEMTDL-RMEKDNLEREKK----EKANRI 422
Query: 413 KDMEDKNNKLLHALRNSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLE 472
K ++ N L+ ++ + A WL++++ P++LE+N+ ++ HA Y+E
Sbjct: 423 KQFDNLMNLKEEKLKRMYSDT-YNAVVWLKENKDRFKNRVCQPMMLEINMKDQRHAKYVE 481
Query: 473 DHVGHYIWKSFITQDAGDRDFLAKNLKPFDVPILNYV---SNESSRKEPFQISEEMRALG 529
+H+ K+F+ + D K ++ +N V + + P + +++ G
Sbjct: 482 NHIPMNDMKAFVFESQEDMQVFLKEVRDKQNLRVNTVCAPQEPYAEQRPKRPITDLKQYG 541
Query: 530 ISARLDQVFDAPHAVKEVLISQFGLDSSYIGSKETDQKADNVAK-LGILDFWTPENHYRW 588
+ L ++FDAP+ V L Q+ + +G+++T + V K + +T E Y
Sbjct: 542 FFSYLRELFDAPYPVMNYLCYQYKVHEVPVGTEQTRSMIEKVIKETDLRQMYTAEEKYVT 601
Query: 589 SISRYGGHVSASVEPVNQSRLLLCSVDGNXXXXXXXXXXXXXXXXXXXXXXXXXMQTEQR 648
S Y + +S + ++ L +VD + QR
Sbjct: 602 KKSVYSQKLISSNVSLKGAQFLTVTVDAEERQQVVDQLKEIERKCSTIETSMEQLAERQR 661
Query: 649 LIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQ 708
++ +L+ ++ I+ + K K+R++E I+ + L +E +D++N L ++ Q
Sbjct: 662 SLDRRDNELRLRKKTILEM----KTKKRQLEQKISTKYDSLNRLE-QDNLN--LEEVQQQ 714
Query: 709 A----ADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKL 764
A +LN+Q+ K ++ L+ E S E + S ++ ++E + K
Sbjct: 715 ANNRIKNLNVQKAKLVKDLLELMKECTSLSIEKVELALQSTAISSEKNKIESDYKSATSQ 774
Query: 765 ALQASLHYE--DCKKE--VEHCRKHLSDAKRQAESIA---FITPELEKEFLEMPTTIEEL 817
+ Y+ + KK +E+C+ L A RQA ++ + + + F +P +++E+
Sbjct: 775 LRELKNQYDGIEAKKLHLLENCKGLLRKA-RQACNLGPNQAVPQDFQTAFQSLPESLDEI 833
Query: 818 EAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKW 877
+A + + S+A+ L +++ +Y R ++I++++ + K EL+ + I +KEKW
Sbjct: 834 DAMLNEERSRASCFTGLTASVVDDYNKRTKEIQEVTEELNRKKLELEDYRKNISQVKEKW 893
Query: 878 LPTLRNLVAQINETFSRNFQEMAVAGEVSLD-EHESDFDKFGILIKVKFRQSGQLEVLSA 936
L L+ L+ +IN+ FS F M GEV L E E ++DK+GI I+VKFR S QL L+
Sbjct: 894 LNPLKQLIEKINDQFSSFFSSMQCVGEVDLHTEKEEEYDKYGIRIRVKFRSSTQLHELTP 953
Query: 937 HHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTPQ 996
HHQSGGERSVST+LYL++LQ+L CPFRVVDEINQGMDP+NER++F+ +V+ A + NT Q
Sbjct: 954 HHQSGGERSVSTMLYLMALQELNRCPFRVVDEINQGMDPVNERRVFEMVVKTACKENTSQ 1013
Query: 997 CFLLTPKLLPDLEYSEACSILNIMNGPWIEQPSKVWS 1033
F +TPKLL +L Y+E ++L + NGP++ +P+K W+
Sbjct: 1014 YFFITPKLLQNLTYAEKMTVLFVYNGPFMLEPTK-WN 1049
>UNIPROTKB|F1P1S9 [details] [associations]
symbol:SMC5 "Structural maintenance of chromosomes protein
5" species:9031 "Gallus gallus" [GO:0000724 "double-strand break
repair via homologous recombination" evidence=IEA] [GO:0003924
"GTPase activity" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0030915 "Smc5-Smc6 complex" evidence=IEA]
[GO:0051258 "protein polymerization" evidence=IEA]
InterPro:IPR018316 InterPro:IPR027131 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005525 GO:GO:0043234 GO:GO:0003924
GO:GO:0051258 Gene3D:3.30.1330.20 PANTHER:PTHR19306:SF1
GeneTree:ENSGT00550000074963 EMBL:AADN02068109 EMBL:AADN02068110
EMBL:AADN02078239 EMBL:AADN02078240 EMBL:AADN02078241
EMBL:AADN02078242 EMBL:AADN02078243 EMBL:AADN02078244
EMBL:AADN02078245 EMBL:AADN02078246 EMBL:AADN02078247
EMBL:AADN02078248 IPI:IPI01017182 Ensembl:ENSGALT00000038206
ArrayExpress:F1P1S9 Uniprot:F1P1S9
Length = 1041
Score = 1091 (389.1 bits), Expect = 1.8e-110, P = 1.8e-110
Identities = 308/1046 (29%), Positives = 519/1046 (49%)
Query: 21 GNIIEIELHNFMTFDHLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI 80
G+I+ I + NF+T+D +PG LN++IG NG+GKSS+VCAI L L G LGRA +
Sbjct: 3 GSIVRIYMENFLTYDICEVRPGPNLNMIIGANGTGKSSIVCAICLGLAGKPSFLGRAEKV 62
Query: 81 GAYVKRGEESGYIKISLRGDTKEEHLTIMRKIDT-RNKSEWFFNGKVVPKGEVLEITKRF 139
G +VK+G G ++I L E++ I R+I N S W N K+ V E
Sbjct: 63 GLFVKQGCLKGLVEIELF--KVPENIIITREIQVVTNTSTWHINRKLTTLKTVEEQVAAL 120
Query: 140 NIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECT 199
NIQV+NL QFLPQD+V EFA++S ++LLE TEK++G P++ HC L K + +E
Sbjct: 121 NIQVDNLCQFLPQDKVGEFARMSKIELLEATEKSIGPPEMYQFHCKLKSLKEKERELENV 180
Query: 200 VKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAEYIXXXXX 259
K ++L ++K ++DV+R + L+ ++ +++K PW++Y+ + ++
Sbjct: 181 CKDKVNSLEKMKQRAERYKQDVDRYHECKRHLDLIDMLQRKRPWVEYETVRQQH----ED 236
Query: 260 XXXXXXXXXXXXNTLHEFSKPIEGKKQE-KAILDGDCKKLSSL------INENSKRRMDF 312
L E P+ K +E + + K+ + +++ K + D
Sbjct: 237 VKQRRDQAKEELKNLKEMQSPLTKKIRECEEFYNSLNMKIKNTADEIKGVSQKCKEKQDA 296
Query: 313 LEKVDQGVQVQGKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPAYEPPHDKIEK 372
LE D+ Q+ + IL A TV E +I+
Sbjct: 297 LEMKDK--QISEINQALRMKKDEEVDRKKKILSAYKMIDEWNNELNTVTDCENLQPQIDA 354
Query: 373 LGSQILELGVQ-AN-QKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNN--KLLHALRN 428
+ +++ + + AN + EKI NQ + R DR+ + NN K+
Sbjct: 355 VNNELKHVQEERANIDSDIGDVTTEKI-NQERENGR-IIDRIGQL---NNIIKVKEETLQ 409
Query: 429 SGAENIFEAYCWLQQHRHELNKEAYGPVLLEV---NVSNRAHANYLEDHVGHYIWKSFIT 485
+ + A WL++++H+ KE P++L NV + HA Y+E+H+ K+F+
Sbjct: 410 ARFRDTHSALMWLRKNKHKFKKEVCEPMMLTTSRSNVKDNKHAKYVENHISTNDMKAFVF 469
Query: 486 QDAGDRDFLAKNLKPFDVPILNYV-SNESSRKE--PFQISEEMRALGISARLDQVFDAPH 542
+ D + L+ +N V + + S E P EE+ G + L ++FDAP
Sbjct: 470 ESQEDMELFLVELRDRQKLRVNAVCAPDKSCAETLPSTPIEELHRYGFFSYLRELFDAPL 529
Query: 543 AVKEVLISQFGLDSSYIGSKETDQKADNVAK-LGILDFWTPENHYRWSISRYGGHVSASV 601
V L SQ+ + +G+++T + V K + +T E Y +S Y +S S
Sbjct: 530 PVMSYLCSQYHVHEVPVGTEKTRNMIERVIKETKLKQIYTAEEKYTIKVSTYT-KLSFST 588
Query: 602 EP-VNQSRLLLCSVDGNXXXXXXXXXXXXXXXXXXXXXXXXXMQTEQRLIEDEAAKLQKE 660
+ ++ L VD + + Q+ +E +L+++
Sbjct: 589 NMCLRPAQFLNYYVDTDERRQLENQQQNIKHILQSLDKQLMTLCERQKHLECRDNELRQQ 648
Query: 661 REEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAA----DLNIQQ 716
++E++ +R+++E+ I ++ + +E ++ IN L K QA +NIQ+
Sbjct: 649 KKELLE----RGSRRKQLESKIAVKYDSIRQLE-QNPIN--LEKESQQAKVKIRAINIQK 701
Query: 717 FKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYEDCK 776
K E+ + VS A+ + S DA+ LE K + L+AS Y +C
Sbjct: 702 AKLVTELMCHIKNYVSLNICKADLILQSTAVDAEKNRLEAEYKA-ASVELRASEKY-NCY 759
Query: 777 KEVE----HCRKHL-SDAKRQAESIA--FITPELEK-EFLEMPTTIEELEAAIQDNISQA 828
+ +C + L ++ +A + +L+ F +P T+EE++A + + S+
Sbjct: 760 GVISAKKAYCEQLLVAEITSMCFELANQMVRCDLQHVAFQTLPDTLEEIDAFLNEERSRV 819
Query: 829 NSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLVAQI 888
+ L+ ++++E + +I+ L E +KKEL + I +KE+WL L+ ++ I
Sbjct: 820 SCFTGLSASVVEECSKQMEEIQKLMESIEENKKELDDYKQSISKIKERWLNPLKKMIESI 879
Query: 889 NETFSRNFQEMAVAGEVSLD-EHESDFDKFGILIKVKFRQSGQLEVLSAHHQSGGERSVS 947
NE FS F M GEV L E+E ++DK+GI I+VKF L L+ +HQSGGE+SVS
Sbjct: 880 NEKFSGFFSSMESVGEVDLHVENEEEYDKYGIRIRVKFHNFTDLHELTPYHQSGGEKSVS 939
Query: 948 TILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTPQCFLLTPKLLPD 1007
T+LYL++LQ+L CPFRVVDEINQGMDP+NER++F+ V+ A + +T Q FL+TPKLL +
Sbjct: 940 TVLYLMALQELNRCPFRVVDEINQGMDPVNERRVFEMFVKTACKESTSQYFLITPKLLQN 999
Query: 1008 LEYSEACSILNIMNGPWIEQPSKVWS 1033
L Y+E ++L + NGP++ + +K W+
Sbjct: 1000 LTYNEKMTLLFVYNGPFMLEANK-WN 1024
>UNIPROTKB|F1P1S0 [details] [associations]
symbol:SMC5 "Structural maintenance of chromosomes protein
5" species:9031 "Gallus gallus" [GO:0000722 "telomere maintenance
via recombination" evidence=IEA] [GO:0000724 "double-strand break
repair via homologous recombination" evidence=IEA] [GO:0000781
"chromosome, telomeric region" evidence=IEA] [GO:0016605 "PML body"
evidence=IEA] [GO:0030915 "Smc5-Smc6 complex" evidence=IEA]
[GO:0034184 "positive regulation of maintenance of mitotic sister
chromatid cohesion" evidence=IEA] [GO:0045842 "positive regulation
of mitotic metaphase/anaphase transition" evidence=IEA] [GO:0090398
"cellular senescence" evidence=IEA] InterPro:IPR027131
InterPro:IPR003395 Pfam:PF02463 GO:GO:0016605 GO:GO:0000724
GO:GO:0000781 GO:GO:0000722 GO:GO:0090398 GO:GO:0045842
GO:GO:0030915 GO:GO:0034184 IPI:IPI00587679 PANTHER:PTHR19306:SF1
OMA:GMDPRNE GeneTree:ENSGT00550000074963 EMBL:AADN02068109
EMBL:AADN02068110 EMBL:AADN02078239 EMBL:AADN02078240
EMBL:AADN02078241 EMBL:AADN02078242 EMBL:AADN02078243
EMBL:AADN02078244 EMBL:AADN02078245 EMBL:AADN02078246
EMBL:AADN02078247 EMBL:AADN02078248 ProteinModelPortal:F1P1S0
Ensembl:ENSGALT00000038212 ArrayExpress:F1P1S0 Uniprot:F1P1S0
Length = 1066
Score = 1088 (388.1 bits), Expect = 3.8e-110, P = 3.8e-110
Identities = 310/1051 (29%), Positives = 519/1051 (49%)
Query: 14 GEDDYMPGNIIEIELHNFMTFDHLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQL 73
G+ ++ G+I+ I + NF+T+D +PG LN++IG NG+GKSS+VCAI L L G
Sbjct: 21 GKPRFVEGSIVRIYMENFLTYDICEVRPGPNLNMIIGANGTGKSSIVCAICLGLAGKPSF 80
Query: 74 LGRATSIGAYVKRGEESGYIKISLRGDTKEEHLTIMRKIDT-RNKSEWFFNGKVVPKGEV 132
LGRA +G +VK+G G ++I L E++ I R+I N S W N K+ V
Sbjct: 81 LGRAEKVGLFVKQGCLKGLVEIELF--KVPENIIITREIQVVTNTSTWHINRKLTTLKTV 138
Query: 133 LEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSK 192
E NIQV+NL QFLPQD+V EFA++S ++LLE TEK++G P++ HC L K
Sbjct: 139 EEQVAALNIQVDNLCQFLPQDKVGEFARMSKIELLEATEKSIGPPEMYQFHCKLKSLKEK 198
Query: 193 LKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAE 252
+ +E K ++L ++K ++DV+R + L+ ++ +++K PW++Y+ + +
Sbjct: 199 ERELENVCKDKVNSLEKMKQRAERYKQDVDRYHECKRHLDLIDMLQRKRPWVEYETVRQQ 258
Query: 253 YIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQE-KAILDGDCKKLSSL------INEN 305
+ L E P+ K +E + + K+ + +++
Sbjct: 259 H----EDVKQRRDQAKEELKNLKEMQSPLTKKIRECEEFYNSLNMKIKNTADEIKGVSQK 314
Query: 306 SKRRMDFLEKVDQGVQVQGKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPAYEP 365
K + D LE D+ Q+ + IL A TV E
Sbjct: 315 CKEKQDALEMKDK--QISEINQALRMKKDEEVDRKKKILSAYKMIDEWNNELNTVTDCEN 372
Query: 366 PHDKIEKLGSQILELGVQ-AN-QKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNN--K 421
+I+ + +++ + + AN + EKI NQ + R DR+ + NN K
Sbjct: 373 LQPQIDAVNNELKHVQEERANIDSDIGDVTTEKI-NQERENGR-IIDRIGQL---NNIIK 427
Query: 422 LLHALRNSGAENIFEAYCWLQQHRHELNKEAYGPVLLEV---NVSNRAHANYLEDHVGHY 478
+ + + A WL++++H+ KE P++L NV + HA Y+E+H+
Sbjct: 428 VKEETLQARFRDTHSALMWLRKNKHKFKKEVCEPMMLTTSRSNVKDNKHAKYVENHISTN 487
Query: 479 IWKSFITQDAGDRDFLAKNLKPFDVPILNYV-SNESSRKE--PFQISEEMRALGISARLD 535
K+F+ + D + L+ +N V + + S E P EE+ G + L
Sbjct: 488 DMKAFVFESQEDMELFLVELRDRQKLRVNAVCAPDKSCAETLPSTPIEELHRYGFFSYLR 547
Query: 536 QVFDAPHAVKEVLISQFGLDSSYIGSKETDQKADNVAK-LGILDFWTPENHYRWSISRYG 594
++FDAP V L SQ+ + +G+++T + V K + +T E Y +S Y
Sbjct: 548 ELFDAPLPVMSYLCSQYHVHEVPVGTEKTRNMIERVIKETKLKQIYTAEEKYTIKVSTYT 607
Query: 595 GHVSASVEP-VNQSRLLLCSVDGNXXXXXXXXXXXXXXXXXXXXXXXXXMQTEQRLIEDE 653
+S S + ++ L VD + + Q+ +E
Sbjct: 608 -KLSFSTNMCLRPAQFLNYYVDTDERRQLENQQQNIKHILQSLDKQLMTLCERQKHLECR 666
Query: 654 AAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAA--- 710
+L+++++E++ +R+++E+ I ++ + +E ++ IN L K QA
Sbjct: 667 DNELRQQKKELLE----RGSRRKQLESKIAVKYDSIRQLE-QNPIN--LEKESQQAKVKI 719
Query: 711 -DLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDA-KIR-ELEFNLKQHEKLALQ 767
+NIQ+ K E+ + VS A+ + S DA K R E E+ E A +
Sbjct: 720 RAINIQKAKLVTELMCHIKNYVSLNICKADLILQSTAVDAEKNRLEAEYKAASVELRASE 779
Query: 768 ---ASLHYEDCK-KEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQD 823
ASL E E+ L++ + + + L F +P T+EE++A + +
Sbjct: 780 RKIASLLSEQLLVAEITSMCFELANQMVRCDLQHGLLKRLAIAFQTLPDTLEEIDAFLNE 839
Query: 824 NISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRN 883
S+ + L+ ++++E + +I+ L E +KKEL + I +KE+WL L+
Sbjct: 840 ERSRVSCFTGLSASVVEECSKQMEEIQKLMESIEENKKELDDYKQSISKIKERWLNPLKK 899
Query: 884 LVAQINETFSRNFQEMAVAGEVSLD-EHESDFDKFGILIKVKFRQSGQLEVLSAHHQSGG 942
++ INE FS F M GEV L E+E ++DK+GI I+VKF L L+ +HQSGG
Sbjct: 900 MIESINEKFSGFFSSMESVGEVDLHVENEEEYDKYGIRIRVKFHNFTDLHELTPYHQSGG 959
Query: 943 ERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTPQCFLLTP 1002
E+SVST+LYL++LQ+L CPFRVVDEINQGMDP+NER++F+ V+ A + +T Q FL+TP
Sbjct: 960 EKSVSTVLYLMALQELNRCPFRVVDEINQGMDPVNERRVFEMFVKTACKESTSQYFLITP 1019
Query: 1003 KLLPDLEYSEACSILNIMNGPWIEQPSKVWS 1033
KLL +L Y+E ++L + NGP++ + +K W+
Sbjct: 1020 KLLQNLTYNEKMTLLFVYNGPFMLEANK-WN 1049
>UNIPROTKB|F1NK20 [details] [associations]
symbol:SMC5 "Structural maintenance of chromosomes protein
5" species:9031 "Gallus gallus" [GO:0051258 "protein
polymerization" evidence=IEA] [GO:0000724 "double-strand break
repair via homologous recombination" evidence=IEA] [GO:0003924
"GTPase activity" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0030915 "Smc5-Smc6 complex" evidence=IEA]
InterPro:IPR018316 InterPro:IPR027131 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005525 GO:GO:0043234 GO:GO:0003924
GO:GO:0051258 Gene3D:3.30.1330.20 PANTHER:PTHR19306:SF1
GeneTree:ENSGT00550000074963 EMBL:AADN02068109 EMBL:AADN02068110
EMBL:AADN02078239 EMBL:AADN02078240 EMBL:AADN02078241
EMBL:AADN02078242 EMBL:AADN02078243 EMBL:AADN02078244
EMBL:AADN02078245 EMBL:AADN02078246 EMBL:AADN02078247
EMBL:AADN02078248 IPI:IPI00820868 Ensembl:ENSGALT00000024394
ArrayExpress:F1NK20 Uniprot:F1NK20
Length = 1043
Score = 1084 (386.6 bits), Expect = 1.0e-109, P = 1.0e-109
Identities = 306/1046 (29%), Positives = 518/1046 (49%)
Query: 14 GEDDYMPGNIIEIELHNFMTFDHLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQL 73
G+ ++ G+I+ I + NF+T+D +PG LN++IG NG+GKSS+VCAI L L G
Sbjct: 6 GKPRFVEGSIVRIYMENFLTYDICEVRPGPNLNMIIGANGTGKSSIVCAICLGLAGKPSF 65
Query: 74 LGRATSIGAYVKRGEESGYIKISLRGDTKEEHLTIMRKIDT-RNKSEWFFNGKVVPKGEV 132
LGRA +G +VK+G G ++I L E++ I R+I N S W N K+ V
Sbjct: 66 LGRAEKVGLFVKQGCLKGLVEIELF--KVPENIIITREIQVVTNTSTWHINRKLTTLKTV 123
Query: 133 LEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSK 192
E NIQV+NL QFLPQD+V EFA++S ++LLE TEK++G P++ HC L K
Sbjct: 124 EEQVAALNIQVDNLCQFLPQDKVGEFARMSKIELLEATEKSIGPPEMYQFHCKLKSLKEK 183
Query: 193 LKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAE 252
+ +E K ++L ++K ++DV+R + L+ ++ +++K PW++Y+ + +
Sbjct: 184 ERELENVCKDKVNSLEKMKQRAERYKQDVDRYHECKRHLDLIDMLQRKRPWVEYETVRQQ 243
Query: 253 YIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQE-KAILDGDCKKLSSL------INEN 305
+ L E P+ K +E + + K+ + +++
Sbjct: 244 H----EDVKQRRDQAKEELKNLKEMQSPLTKKIRECEEFYNSLNMKIKNTADEIKGVSQK 299
Query: 306 SKRRMDFLEKVDQGVQVQGKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPAYEP 365
K + D LE D+ Q+ + IL A TV E
Sbjct: 300 CKEKQDALEMKDK--QISEINQALRMKKDEEVDRKKKILSAYKMIDEWNNELNTVTDCEN 357
Query: 366 PHDKIEKLGSQILELGVQ-AN-QKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNN--K 421
+I+ + +++ + + AN + EKI NQ + R DR+ + NN K
Sbjct: 358 LQPQIDAVNNELKHVQEERANIDSDIGDVTTEKI-NQERENGR-IIDRIGQL---NNIIK 412
Query: 422 LLHALRNSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLEDHVGHYIWK 481
+ + + A WL++++H+ KE P++L + V + HA Y+E+H+ K
Sbjct: 413 VKEETLQARFRDTHSALMWLRKNKHKFKKEVCEPMMLTI-VKDNKHAKYVENHISTNDMK 471
Query: 482 SFITQDAGDRDFLAKNLKPFDVPILNYV-SNESSRKE--PFQISEEMRALGISARLDQVF 538
+F+ + D + L+ +N V + + S E P EE+ G + L ++F
Sbjct: 472 AFVFESQEDMELFLIFLRDRQKLRVNAVCAPDKSCAETLPSTPIEELHRYGFFSYLRELF 531
Query: 539 DAPHAVKEVLISQFGLDSSYIGSKETDQKADNVAK-LGILDFWTPENHYRWSISRYGGHV 597
DAP V L SQ+ + +G+++T + V K + +T E Y +S Y +
Sbjct: 532 DAPLPVMSYLCSQYHVHEVPVGTEKTRNMIERVIKETKLKQIYTAEEKYTIKVSTYT-KL 590
Query: 598 SASVEP-VNQSRLLLCSVDGNXXXXXXXXXXXXXXXXXXXXXXXXXMQTEQRLIEDEAAK 656
S S + ++ L VD + + Q+ +E +
Sbjct: 591 SFSTNMCLRPAQFLNYYVDTDERRQLENQQQNIKHILQSLDKQLMTLCERQKHLECRDNE 650
Query: 657 LQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAA----DL 712
L+++++E++ +R+++E+ I ++ + +E ++ IN L K QA +
Sbjct: 651 LRQQKKELLE----RGSRRKQLESKIAVKYDSIRQLE-QNPIN--LEKESQQAKVKIRAI 703
Query: 713 NIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHY 772
NIQ+ K E+ + VS A+ + S DA+ LE K + L+AS
Sbjct: 704 NIQKAKLVTELMCHIKNYVSLNICKADLILQSTAVDAEKNRLEAEYKA-ASVELRAS-EK 761
Query: 773 EDCKK----EVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQA 828
C++ E+ L++ + + E F +P T+EE++A + + S+
Sbjct: 762 AYCEQLLVAEITSMCFELANQMVRCDLQHGKEKESMLAFQTLPDTLEEIDAFLNEERSRV 821
Query: 829 NSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLVAQI 888
+ L+ ++++E + +I+ L E +KKEL + I +KE+WL L+ ++ I
Sbjct: 822 SCFTGLSASVVEECSKQMEEIQKLMESIEENKKELDDYKQSISKIKERWLNPLKKMIESI 881
Query: 889 NETFSRNFQEMAVAGEVSLD-EHESDFDKFGILIKVKFRQSGQLEVLSAHHQSGGERSVS 947
NE FS F M GEV L E+E ++DK+GI I+VKF L L+ +HQSGGE+SVS
Sbjct: 882 NEKFSGFFSSMESVGEVDLHVENEEEYDKYGIRIRVKFHNFTDLHELTPYHQSGGEKSVS 941
Query: 948 TILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTPQCFLLTPKLLPD 1007
T+LYL++LQ+L CPFRVVDEINQGMDP+NER++F+ V+ A + +T Q FL+TPKLL +
Sbjct: 942 TVLYLMALQELNRCPFRVVDEINQGMDPVNERRVFEMFVKTACKESTSQYFLITPKLLQN 1001
Query: 1008 LEYSEACSILNIMNGPWIEQPSKVWS 1033
L Y+E ++L + NGP++ + +K W+
Sbjct: 1002 LTYNEKMTLLFVYNGPFMLEANK-WN 1026
>RGD|1307492 [details] [associations]
symbol:Smc5 "structural maintenance of chromosomes 5"
species:10116 "Rattus norvegicus" [GO:0000722 "telomere maintenance
via recombination" evidence=IEA;ISO] [GO:0000724 "double-strand
break repair via homologous recombination" evidence=IEA;ISO]
[GO:0000781 "chromosome, telomeric region" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0016605 "PML body"
evidence=IEA;ISO] [GO:0030915 "Smc5-Smc6 complex" evidence=IEA;ISO]
[GO:0034184 "positive regulation of maintenance of mitotic sister
chromatid cohesion" evidence=IEA;ISO] [GO:0045842 "positive
regulation of mitotic metaphase/anaphase transition"
evidence=IEA;ISO] [GO:0090398 "cellular senescence"
evidence=IEA;ISO] [GO:0006303 "double-strand break repair via
nonhomologous end joining" evidence=ISO] InterPro:IPR027131
InterPro:IPR003395 Pfam:PF02463 RGD:1307492 GO:GO:0005524
GO:GO:0007059 GO:GO:0003677 GO:GO:0030261 GO:GO:0009295
EMBL:CH473953 CTD:23137 PANTHER:PTHR19306:SF1
GeneTree:ENSGT00550000074963 IPI:IPI00951981 RefSeq:NP_001099827.1
UniGene:Rn.127947 Ensembl:ENSRNOT00000067796 GeneID:293967
KEGG:rno:293967 UCSC:RGD:1307492 NextBio:637334 Uniprot:D4A9F0
Length = 1064
Score = 608 (219.1 bits), Expect = 1.1e-106, Sum P(2) = 1.1e-106
Identities = 154/402 (38%), Positives = 232/402 (57%)
Query: 644 QTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALA 703
Q EQ+ I + A ++ ++ N+ + E+RK IN++K KL T L
Sbjct: 668 QLEQK-ISSKLASIRLMEQDTCNLEE-EERKASTKIKEINVQKAKLV---------TELT 716
Query: 704 KLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEF-NLKQHE 762
LV L+IQ K + ++N V +S K +MAS ++ E +F L +
Sbjct: 717 GLVKICTSLHIQ--KVDLILQNTTV--ISEKNKLEADYMASSS-QLRVTEQQFIELDDNR 771
Query: 763 KLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFIT--PELEK--------EFLEMPT 812
+ LQ CK+ ++ R+ + + QA F T P + F ++P
Sbjct: 772 QRLLQK------CKELMKRARQVCNLSADQAVPQEFQTQVPTIPNGHSSSPPMAFQDLPN 825
Query: 813 TIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDA 872
T++E++A + + S+A+ LN ++++EY R+ +I+ L+ + + K EL + I
Sbjct: 826 TLDEIDALLTEERSRASCFTGLNPSVVEEYTKREIEIQQLTEELKGKKVELDEYRENISQ 885
Query: 873 LKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLD-EHESDFDKFGILIKVKFRQSGQL 931
+KE+WL L+ LV +INE FS F M AGEV L E+E D+DK+GI I+VKFR S QL
Sbjct: 886 VKERWLNPLKELVEKINEKFSNFFSSMQCAGEVDLHTENEEDYDKYGIRIRVKFRSSTQL 945
Query: 932 EVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQ 991
L+ HHQSGGERSVST+LYL++LQ+L CPFRVVDEINQGMDPINER++F+ +V A +
Sbjct: 946 HELTPHHQSGGERSVSTMLYLMALQELNRCPFRVVDEINQGMDPINERRVFEMVVNTACK 1005
Query: 992 PNTPQCFLLTPKLLPDLEYSEACSILNIMNGPWIEQPSKVWS 1033
NT Q F +TPKLL +L YSE ++L + NGP + +P++ W+
Sbjct: 1006 ENTSQYFFITPKLLQNLPYSEKMTVLFVYNGPHMLEPNR-WN 1046
Score = 525 (189.9 bits), Expect = 1.1e-106, Sum P(2) = 1.1e-106
Identities = 135/457 (29%), Positives = 223/457 (48%)
Query: 18 YMPGNIIEIELHNFMTFDHLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRA 77
++ G+I+ I + NF+T+D PG LN++IG NG+GKSS+VCAI L L G +GRA
Sbjct: 48 FVEGSIVRIAMENFLTYDICEVSPGPHLNMIIGANGTGKSSIVCAICLGLAGKPAFMGRA 107
Query: 78 TSIGAYVKRGEESGYIKISLRGDTKEEHLTIMRKIDT-RNKSEWFFNGKVVPKGEVLEIT 136
+G +VKRG G ++I L + +L I R+ID +N+S WF N K V + V E
Sbjct: 108 DKVGFFVKRGCSKGLVEIELFRTSG--NLIITREIDVIKNQSFWFINKKPVTQKIVEEQV 165
Query: 137 KRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTI 196
NIQV NL QFLPQD+V EFAKLS ++LLE TEK++G P++ HC L K K +
Sbjct: 166 AALNIQVGNLCQFLPQDKVGEFAKLSKIELLEATEKSIGPPEMHRYHCELKNFREKEKQL 225
Query: 197 ECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAEYIXX 256
E + K + L+++ N ++DVER +R L+ +E ++ K PW++Y+ + EY
Sbjct: 226 ETSCKEKTEYLDKMIQRNERYKQDVERFYERKRHLDLIEMLEAKRPWVEYENVRQEYEGV 285
Query: 257 XXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENS---KRRMDFL 313
++ IE ++++ L+ K+ ++ I E S K+R D +
Sbjct: 286 KLVRDRVKEEVRKLKEGQIPMTRRIEEIERQRRTLEVRIKEKATDIKEASQKCKQRQDLI 345
Query: 314 EKVDQGV-QVQGKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPAYEPPHDKIEK 372
E+ D+ + ++Q K + +P D I
Sbjct: 346 ERKDRHIKELQQALTVKQNEEQDRQKRISNTRKMIEDLQNELRTAENCENLQPQIDAITN 405
Query: 373 LGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAE 432
++ E + + K ++++L + K R SD + ++ N+ LR +
Sbjct: 406 DLRRVQEEKALCEGEIIDKQREKEMLEKQK---RSVSDHITRFDNLMNQKEDKLRQRYRD 462
Query: 433 NIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHAN 469
++A WL+ +R + P++L V + + N
Sbjct: 463 T-YDAVLWLRNNRDRFKQRVCEPIMLTVRDNKKLRVN 498
Score = 130 (50.8 bits), Expect = 1.7e-55, Sum P(2) = 1.7e-55
Identities = 73/396 (18%), Positives = 165/396 (41%)
Query: 516 KEPFQISEEMRALGISARLDQVFDAPHAVKEVLISQFGLDSSYIGSKETDQKADNVAK-L 574
K P + E++ G + L ++FDAP V L Q+ + +G++ T ++ + V +
Sbjct: 510 KAPSRSLNELKQYGFFSYLRELFDAPDPVMSYLCCQYHIHEVPVGTERTRERIERVIQET 569
Query: 575 GILDFWTPENHYRWSISRYGGHVSASVEPVNQSRLLLCSVDGNXXXXXXXXXXXXXXXXX 634
+ +T E Y S Y V +S + ++ L +VD
Sbjct: 570 RLKQIYTAEEKYVLKTSFYSNKVISSNTSLKVAQFLTVTVDLEQRRHLEEQLKEINRKLE 629
Query: 635 XXXXXXXXMQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEK 694
++ R +E + +L+ +++E++ K K+R++E I+ + + +E+
Sbjct: 630 AVDSGLVALRDTNRHLELKDNELRLKKKELLE----RKTKKRQLEQKISSKLASIRLMEQ 685
Query: 695 ED-DINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRE 753
+ ++ K + ++N+Q+ K E+ L+ S + + + ++ +
Sbjct: 686 DTCNLEEEERKASTKIKEINVQKAKLVTELTGLVKICTSLHIQKVDLILQNTTVISEKNK 745
Query: 754 LEFN-LKQHEKLAL--QASLHYEDCKKEV-EHCRKHLSDAKRQAESIAFITPELEKEFLE 809
LE + + +L + Q + +D ++ + + C K L RQ +++ + +EF
Sbjct: 746 LEADYMASSSQLRVTEQQFIELDDNRQRLLQKC-KELMKRARQVCNLS-ADQAVPQEFQT 803
Query: 810 MPTTIEELEAAIQDNISQ--ANSIFFLNQNILQEYEHRQRQIEDL--STKQEADKKELK- 864
TI ++ Q N++ ++ +L E R L S +E K+E++
Sbjct: 804 QVPTIPNGHSSSPPMAFQDLPNTLDEIDA-LLTEERSRASCFTGLNPSVVEEYTKREIEI 862
Query: 865 -RFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEM 899
+ E+ K + L R ++Q+ E + +E+
Sbjct: 863 QQLTEELKGKKVE-LDEYRENISQVKERWLNPLKEL 897
Score = 47 (21.6 bits), Expect = 9.1e-47, Sum P(2) = 9.1e-47
Identities = 32/141 (22%), Positives = 64/141 (45%)
Query: 804 EKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNI--LQEYEHR-QRQIEDLSTKQEADK 860
+KE LE T +LE I ++ SI + Q+ L+E E + +I++++ ++
Sbjct: 656 KKELLERKTKKRQLEQKISSKLA---SIRLMEQDTCNLEEEERKASTKIKEINVQKAKLV 712
Query: 861 KELKRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEH---ESDFDKF 917
EL + +L + + + I+E MA + ++ + E E D ++
Sbjct: 713 TELTGLVKICTSLHIQKVDLILQNTTVISEKNKLEADYMASSSQLRVTEQQFIELDDNRQ 772
Query: 918 GILIKVK--FRQSGQLEVLSA 936
+L K K +++ Q+ LSA
Sbjct: 773 RLLQKCKELMKRARQVCNLSA 793
Score = 40 (19.1 bits), Expect = 1.5e-55, Sum P(2) = 1.5e-55
Identities = 14/66 (21%), Positives = 34/66 (51%)
Query: 186 LVEKSSKLKTIECTVKRNGDTLNQLKA----LNVEQEKDVERVRQRAELLEKVESMKKKL 241
L E + KL+ ++ + DT L+ L +++++ +ER ++ +L +K+ S +
Sbjct: 621 LKEINRKLEAVDSGLVALRDTNRHLELKDNELRLKKKELLERKTKKRQLEQKISSKLASI 680
Query: 242 PWLKYD 247
++ D
Sbjct: 681 RLMEQD 686
>POMBASE|SPAC14C4.02c [details] [associations]
symbol:smc5 "Smc5-6 complex SMC subunit Smc5"
species:4896 "Schizosaccharomyces pombe" [GO:0000724 "double-strand
break repair via homologous recombination" evidence=IEA]
[GO:0000935 "barrier septum" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005819 "spindle"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0030915
"Smc5-Smc6 complex" evidence=IDA] [GO:0032153 "cell division site"
evidence=IDA] [GO:0044732 "mitotic spindle pole body" evidence=IDA]
[GO:0046982 "protein heterodimerization activity" evidence=IPI]
[GO:0048478 "replication fork protection" evidence=IC]
InterPro:IPR027131 InterPro:IPR003395 PomBase:SPAC14C4.02c
Pfam:PF02463 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0007126 EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0032153
GO:GO:0044732 GO:GO:0000724 GO:GO:0048478 GO:GO:0000935
eggNOG:COG1196 GO:GO:0030915 PANTHER:PTHR19306:SF1 EMBL:AJ277543
PIR:T37687 RefSeq:NP_594907.2 IntAct:O13710 STRING:O13710
EnsemblFungi:SPAC14C4.02c.1 GeneID:2541587 OrthoDB:EOG48KVKB
NextBio:20802681 Uniprot:O13710
Length = 1076
Score = 468 (169.8 bits), Expect = 4.2e-79, Sum P(2) = 4.2e-79
Identities = 126/386 (32%), Positives = 210/386 (54%)
Query: 652 DEAAKLQKEREEIINIVQI-EKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAA 710
D + L+KER+E ++ I E ++ +E H L R+ E + ++ A +++
Sbjct: 680 DILSTLRKERDE--KLIPIHEWQQLQERIEHQTLLLRQREKVPEQ------FAAEIEKNE 731
Query: 711 DLNIQQFKYAIEIKNLLVEIVSCK-WSYAEKHMASIEFDAKIRELEFNLKQHEKLALQAS 769
D+ + F+ A+ L V+ S K + EK + S + E ++ L++HE A Q +
Sbjct: 732 DIRKENFE-ALMNSVLKVKENSIKATNNFEKMLGS---RLNVIEAKYKLEKHEMDANQVN 787
Query: 770 LHYEDCKKEVEHCRKHLSDAKRQAESI-AFITPELEKEFLEMPTTIEELE------AAIQ 822
+ + ++ L+ A+ A S+ + L+ + + T I EL + +
Sbjct: 788 ARLTEVQDRLKDITDKLASAREDAMSLYGSVVDSLQTQSSDRQTAITELNEEFATSSEVD 847
Query: 823 DNIS-QANSIFFLNQN--ILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLP 879
+ IS + + F+N N ++++Y+ R+++IE+L +K + ++ E++++KE W+
Sbjct: 848 NKISIEETKLKFMNVNSYVMEQYDARKKEIEELESKMSDFDQSVEELQDEMNSIKEDWVS 907
Query: 880 TLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVLSAHHQ 939
L V I++ FS+ M AGEV L + + D+DK+ I I V+FR+ L+ L+ Q
Sbjct: 908 KLEENVQCISDRFSKGMSGMGYAGEVRLGKSD-DYDKWYIDILVQFREEEGLQKLTGQRQ 966
Query: 940 SGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTPQCFL 999
SGGERSVSTI+YL+SLQ L PFR+VDEINQGMDP NER + + +V + Q FL
Sbjct: 967 SGGERSVSTIMYLLSLQGLAIAPFRIVDEINQGMDPRNERVVHRHIVNSVCDNAVSQYFL 1026
Query: 1000 LTPKLLPDLEYSEACSILNIMNGPWI 1025
+TPKLLPDL Y +L I NG W+
Sbjct: 1027 VTPKLLPDLTYHRNLKVLCICNGAWL 1052
Score = 415 (151.1 bits), Expect = 4.2e-79, Sum P(2) = 4.2e-79
Identities = 148/580 (25%), Positives = 250/580 (43%)
Query: 7 KRLKVSRGEDDYMPGNIIEIELHNFMTFDHLICKPGSRLNLVIGPNGSGKSSLVCAIALA 66
KR K + DY G+I+ I+L NF+T+D+ PG LNL+IGPNG+GKS++V AI +
Sbjct: 8 KRRKSNPLYSDYALGSIVRIKLVNFVTYDYCELFPGPYLNLIIGPNGTGKSTIVSAICIG 67
Query: 67 LGGDTQLLGRATSIGAYVKRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKV 126
LG +LLGRA ++K G+ + I+I ++ +E +TI R+I S + N +
Sbjct: 68 LGWPPKLLGRAKEAREFIKYGKNTATIEIEMKY-RDDETVTITRQISQDKSSSFSINREA 126
Query: 127 VPKGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCAL 186
+ + FN+Q+NNL FLPQDRV EFA+L P L ETE+A+ L H L
Sbjct: 127 CATSSITSLMDTFNVQLNNLCHFLPQDRVAEFAQLDPYSRLMETERAIDHEGLLPAHEKL 186
Query: 187 VEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKY 246
++ + + I + TLN LK EK+V ++R EK++S + L K
Sbjct: 187 IDLRKREREILQNKNQGQSTLNSLKDRQQALEKEVNIFKER----EKIKSYIEMLGLAKM 242
Query: 247 DMKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENS 306
+ E L E +PI K +E L D K N+ S
Sbjct: 243 LVIYREKTNVFNQLRADKKKLKKDLKDLVEEFQPILDKGEE---LRSDLKLKDDTFNDYS 299
Query: 307 KRRMDFLEKVDQGVQVQGKYKXXXXXXXXXXXXXXXILK-ARXXXXXXXXXXQTVPAYEP 365
M+ + + +L+ A +++ +
Sbjct: 300 SASMELNTSNLRARASFSNFMENEKKLYEKVNTNRTLLRNANLTLNEAQQSVKSLTERQG 359
Query: 366 PHDKIEKLGSQILELGVQ-ANQKRLQKSEKEKILNQNKL-TLRQC-SDRLKDME------ 416
P G Q L+ +Q N ++LQ E EK+ + ++L ++R + +L D++
Sbjct: 360 PRPSDN--GVQDLQEKMQEVNAEKLQH-ENEKLESSHELGSIRTLKAQKLIDLDNIKREL 416
Query: 417 ----DKNNKLLHALRNS-GAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYL 471
D + L + ++ G E+ ++ Y L+++ AYGP+ + + + A +
Sbjct: 417 SYYNDATKRKLDFMSSAPGWEDAYQTYQLLKEYESAFEAPAYGPIYMNLKCKEKGFAALI 476
Query: 472 EDHVGHYIWKSFITQDAGD----RDFLAKNLKPFDVPILNYVSNESSRK-EPFQ---ISE 523
E +++FI + D D + K P + S+E +K E F+ E
Sbjct: 477 EGFFRTDTFRTFIMSNYNDYLKLMDLITSKTKY--TPTIREFSSERKKKIEDFEPPCSRE 534
Query: 524 EMRALGISARLDQVFDAPHAVKEVLISQFGLDSSYIGSKE 563
++++ G + + P V L + I +E
Sbjct: 535 KLQSFGFDGYVIDFLEGPEVVLVALCHMLKIHQIPIAKRE 574
Score = 51 (23.0 bits), Expect = 8.7e-41, Sum P(2) = 8.7e-41
Identities = 16/63 (25%), Positives = 29/63 (46%)
Query: 386 QKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAENIFEAYCWLQ-QH 444
Q Q S+ E + N+ + L++ + + + + N +L LR E + + W Q Q
Sbjct: 646 QLNAQLSQLENLQNEER-KLQEKVNEHESLLSRTNDILSTLRKERDEKLIPIHEWQQLQE 704
Query: 445 RHE 447
R E
Sbjct: 705 RIE 707
Score = 48 (22.0 bits), Expect = 1.8e-40, Sum P(2) = 1.8e-40
Identities = 21/75 (28%), Positives = 34/75 (45%)
Query: 173 AVGDPQLPVQHCALVEKSSKL-KTIECT-VKRNGDTLN----QLKALNVEQEKDVERVRQ 226
A GD ++ + L +S + +E VKR + LN QL+ L E+ K E+V +
Sbjct: 611 AYGDREITRRTDPLPSRSIYFSENVEMDLVKRKEEQLNAQLSQLENLQNEERKLQEKVNE 670
Query: 227 RAELLEKVESMKKKL 241
LL + + L
Sbjct: 671 HESLLSRTNDILSTL 685
Score = 39 (18.8 bits), Expect = 1.1e-33, Sum P(2) = 1.1e-33
Identities = 13/66 (19%), Positives = 31/66 (46%)
Query: 650 IEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQA 709
IE+ K ++ K++ E+E+ ++ + +E E +D++N+ V +
Sbjct: 852 IEETKLKFMNVNSYVMEQYDARKKEIEELESKMSDFDQSVE--ELQDEMNSIKEDWVSKL 909
Query: 710 ADLNIQ 715
+ N+Q
Sbjct: 910 EE-NVQ 914
>FB|FBgn0052438 [details] [associations]
symbol:Smc5 "Smc5" species:7227 "Drosophila melanogaster"
[GO:0000796 "condensin complex" evidence=NAS] [GO:0007067 "mitosis"
evidence=NAS] [GO:0000070 "mitotic sister chromatid segregation"
evidence=NAS] [GO:0005634 "nucleus" evidence=ISS] [GO:0000724
"double-strand break repair via homologous recombination"
evidence=IEA] [GO:0030915 "Smc5-Smc6 complex" evidence=IEA]
InterPro:IPR027131 InterPro:IPR003395 Pfam:PF02463 HSSP:P58301
PANTHER:PTHR19306:SF1 ChiTaRS:SMC5 FlyBase:FBgn0052438
EMBL:BT009967 ProteinModelPortal:Q7YU66 IntAct:Q7YU66 STRING:Q7YU66
PRIDE:Q7YU66 InParanoid:Q7YU66 ArrayExpress:Q7YU66 Bgee:Q7YU66
Uniprot:Q7YU66
Length = 1034
Score = 724 (259.9 bits), Expect = 2.2e-71, P = 2.2e-71
Identities = 253/1028 (24%), Positives = 450/1028 (43%)
Query: 19 MPGNIIEIELHNFMTFDHLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRAT 78
+ G I + +F+++ + P LN++ GPNGSGKS++V AI L LGG+ LL R+
Sbjct: 12 LAGRIHSVYCKDFVSYSEITFHPKHYLNVLTGPNGSGKSTIVSAIILGLGGEPILLDRSA 71
Query: 79 SIGAYVKRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKR 138
S+ Y++ + S I + + G T T R I++ S + N K K L
Sbjct: 72 SVADYIQSNKTSATIIVRVYGRTPNTTETFRRIINSNGLSTFSVNDKDTSKKNFLAAVSS 131
Query: 139 FNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIEC 198
FNIQV+NL QFLPQDRV +F+K++P +LL T +V D L +L + ++ +
Sbjct: 132 FNIQVSNLCQFLPQDRVQDFSKMNPQELLLNTMSSVCDEDLINSFNSLKQMRTEQANVHA 191
Query: 199 T-VKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKY---DMKKAEYI 254
K D + + K L + V + ++R E+ +K++ K W++ + K AE
Sbjct: 192 NREKEKSDLVKKQKRLE-HLQMTVSQYKEREEVKQKLQVYSAKKLWVETQAGEAKAAEMK 250
Query: 255 XXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQE--KAILDGDCKKLSSLINENSKRRMDF 312
+ L + IE +K+ KA+L+ + L + + E K +D
Sbjct: 251 TQVKNAKTQSDKLKNQHDKLLPSQEQIEKEKESLRKALLE-KTRLLENAVAE--KAAIDG 307
Query: 313 -LEKVDQGVQVQGKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPAYEPPH-DKI 370
++ + QG+ Q KY+ +T+ P ++
Sbjct: 308 KMDSLKQGIY-QKKYELEQNIKKSRRTATECD-NLNQLVENKIYELETLNKSRPLIVSEL 365
Query: 371 EKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKL--LHALRN 428
E+ +A ++ ++ + E+ LN + + +LK +N K+ + +R
Sbjct: 366 ERAKESCAAARGKAMEQYSRRRQLEQKLNDEMIP-EITAYKLKIERLRNVKMQKIDEIRA 424
Query: 429 SGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLEDHVGHYIWKSFITQDA 488
N+ A WL Q++ Y P++LE+ V N A +LE+ V +F +D
Sbjct: 425 KNP-NLVVAMNWLAQNKQRYKLNVYDPMILELTVQNHEDAKFLENVVAQRDLFAFACEDK 483
Query: 489 GDRDFLAKNL---KPFDVPILNYVSNESSRKEPFQISEEMRALGISARLDQVFDAPHAVK 545
GD L L + V ++ ++ P +++R+ G + L + P +
Sbjct: 484 GDMSDLINELCVKQKLGVNVIYCAPSDRLVYSPKTPIDDLRSFGFRSYLVDLVTGPIPLI 543
Query: 546 EVLISQFGLDSSYIGSKETDQKADNVAKLGILDFWTPENHYRWSISRYGGHVSASVEPVN 605
L + + + + IG++ ++ K I ++ + + SRY + +
Sbjct: 544 NKLCASYSIHNIPIGTEAVGNYTSSIPK-AIRVYFGGSKKFVVTASRYRSDTILTESSIR 602
Query: 606 QSRLLLCSVDGNXXXXXXXXXXXXXXXXXXXXXXXXXMQTEQRLIEDEAAKLQKEREEII 665
L+ +VD E ++ A Q++R ++
Sbjct: 603 AKNQLI-TVDSQQLALVMKQCSEAVKESDSIKNAITQTDNEFERLQAVAKDEQEKRRKLD 661
Query: 666 NIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQA-ADLNIQQFKYAIEIK 724
+ + E+E L+K KLE++ D ++ + DL + F E+
Sbjct: 662 QKIAHFNSLKTEIET---LQK-KLEALRNSDSLDCLETNFCNSLHKDLK-KIFDADAELC 716
Query: 725 NLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYEDCKKEVEHCRK 784
+ L I EK+MA + + + E ++ ++ Q+ D ++ ++
Sbjct: 717 SCLKAIDRL---IIEKNMAQTKVSIYMLQHETQIEALKESEEQSKAATRDFQQLLQCLEN 773
Query: 785 HLSDAKRQAESIAFIT----PE-----LEKEFLEMPTT-IEELEAAIQDNISQANSIFFL 834
+SD ++ +I + P +KEF E+ + EL AI D ++ + +
Sbjct: 774 QISDVNKRKSAIQGLCHGEIPTSSKFPFKKEFRELENIDLPELREAIHDFQARLECMKSV 833
Query: 835 NQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLVAQINETFSR 894
N + Y+ Q +++ L + + K + + L +KW P L +LV I+ FS
Sbjct: 834 NSEAISSYQGLQNEVKQLEEGIQESVNQAKSIESGMSNLYDKWEPKLNSLVETISTKFSE 893
Query: 895 NFQEMAVAGEVSLDEHES-DFDKFGILIKVKFRQSGQLEVLSAHHQSGGERSVSTILYLV 953
+ + GEV L + + DFD +GI I V+FR+ QL+ L QSGGER+VS +Y +
Sbjct: 894 FMESIEYVGEVVLSKTDKYDFDSYGIQIMVQFRRGLQLQPLDKFIQSGGERAVSIAIYSL 953
Query: 954 SLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTPQCFLLTPKLLPDLEYSEA 1013
SLQ +T+ PFR VDEINQGMD NER +F L++ A++ + Q +TPKLL DL Y+E
Sbjct: 954 SLQHVTHVPFRCVDEINQGMDATNERHIFDLLLKEATKHGSAQYLFVTPKLLRDLNYNEH 1013
Query: 1014 CSILNIMN 1021
+ + N
Sbjct: 1014 LCVSIVHN 1021
>UNIPROTKB|F1MPW4 [details] [associations]
symbol:SMC5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090398 "cellular senescence" evidence=IEA] [GO:0045842
"positive regulation of mitotic metaphase/anaphase transition"
evidence=IEA] [GO:0034184 "positive regulation of maintenance of
mitotic sister chromatid cohesion" evidence=IEA] [GO:0030915
"Smc5-Smc6 complex" evidence=IEA] [GO:0016605 "PML body"
evidence=IEA] [GO:0000781 "chromosome, telomeric region"
evidence=IEA] [GO:0000724 "double-strand break repair via
homologous recombination" evidence=IEA] [GO:0000722 "telomere
maintenance via recombination" evidence=IEA] InterPro:IPR027131
InterPro:IPR003395 Pfam:PF02463 GO:GO:0016605 GO:GO:0000724
GO:GO:0000781 GO:GO:0000722 GO:GO:0090398 GO:GO:0045842
GO:GO:0030915 GO:GO:0034184 PANTHER:PTHR19306:SF1 OMA:GMDPRNE
GeneTree:ENSGT00550000074963 EMBL:DAAA02022832 EMBL:DAAA02022833
EMBL:DAAA02022834 IPI:IPI00924353 Ensembl:ENSBTAT00000061396
Uniprot:F1MPW4
Length = 1103
Score = 696 (250.1 bits), Expect = 2.4e-66, P = 2.4e-66
Identities = 218/909 (23%), Positives = 419/909 (46%)
Query: 18 YMPGNIIEIELHNFMTFDHLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRA 77
++ G+I+ I + NF+T+D PG LN++IG NG+GKSS+VCAI L L G +GRA
Sbjct: 50 FVEGSIVRIAMENFLTYDVCEVSPGPHLNMIIGANGTGKSSIVCAICLGLAGKPAFMGRA 109
Query: 78 TSIGAYVKRGEESGYIKISLRGDTKEEHLTIMRKIDT-RNKSEWFFNGKVVPKGEVLEIT 136
+G +VKRG G ++I L + +L I R+ID +N+S WF N K V E
Sbjct: 110 DKVGFFVKRGCSKGMVEIELFRTSG--NLVITREIDVAKNQSSWFINKKSTSPKVVEEQV 167
Query: 137 KRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTI 196
NIQV NL QFLPQD+V EFAKLS ++LLE TEK+VG P++ HC L K K +
Sbjct: 168 AALNIQVGNLCQFLPQDKVGEFAKLSKIELLEATEKSVGPPEMHKYHCELKNFREKEKQL 227
Query: 197 ECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAEYIXX 256
E + K+ + L ++ N ++DV+R +R L+ +E ++ K PW++Y+ + EY
Sbjct: 228 ETSCKQKTEYLEKMIQRNERYKQDVDRFYERKRHLDLIEMLEAKRPWVEYENVRQEYEEV 287
Query: 257 XXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENS---KRRMDFL 313
+ ++ IE ++++ L+ ++ + I E S K + D +
Sbjct: 288 KLARDQAKEEVRKLKESQIPITERIEEMERQRHSLEARIREKALAIKETSQKCKHKQDVI 347
Query: 314 EKVDQGVQVQGKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPAYEPPHDKIEKL 373
E+ D+ Q++ + I R +T E +I+ +
Sbjct: 348 ERKDK--QIEELQQALTVKQNEEHDRQRRISNTRKMIEDLQNELRTTENCENLQPQIDAI 405
Query: 374 GSQILELGVQANQKRLQKSE---KEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSG 430
+ + VQ ++K L +SE K K + R D + ++ N+ LR
Sbjct: 406 TNDLRR--VQ-DEKALCESEIIDKRKERETLEKEKRSVDDHIVRFDNLMNQKEDKLRQRY 462
Query: 431 AENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLEDHVGHYIWKSFITQDAGD 490
+ ++A WL+ +R + + P++L +N+ + +A Y+E+H+ ++F+ ++ D
Sbjct: 463 RDT-YDAVLWLRNNRDKFKQRVCEPIMLTINMKDNKNAKYIENHIPSNDLRAFVFENQED 521
Query: 491 RDFLAKNLKPFDVPILNYV---SNESSRKEPFQISEEMRALGISARLDQVFDAPHAVKEV 547
+ K ++ +N V N + K P + +++ G + L ++FDAP V
Sbjct: 522 MEVFLKEVRDNKKLRVNAVIAPKNSYADKAPSRSLNDLKQYGFFSYLRELFDAPDPVMSY 581
Query: 548 LISQFGLDSSYIGSKETDQKADNVAK-LGILDFWTPENHYRWSISRYGGHVSASVEPVNQ 606
L Q+ + +G++ T +K + V + + +T E Y S Y V +S +
Sbjct: 582 LCCQYHIHEVPVGTERTREKIERVIQETRLKQIYTAEEKYVVKTSFYSNKVISSNTSLKV 641
Query: 607 SRLLLCSVDGNXXXXXXXXXXXXXXXXXXXXXXXXXMQTEQRLIEDEAAKLQKEREEIIN 666
++ L +VD + + +E + +L+++++E++
Sbjct: 642 AQFLTVTVDLEQRRHLEEQLKEINRKLQAVDSGLIALHETNKHLEHKDNELRQKKKELLE 701
Query: 667 IVQIEKRKRREMENHINLRKRKLESIEKED-DINTALAKLVDQAADLNIQQFKYAIEIKN 725
K K+R++E I+ + L+ +E++ ++ K + ++NIQ+ K E+ N
Sbjct: 702 ----RKTKKRQLEQKISSKLGSLKLMEQDTCNLEEEERKASTKIKEINIQKAKLVTELTN 757
Query: 726 LLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASL-----HYEDCKKEVE 780
L I +C + +K ++ I E N + + +A A L H+ + + +
Sbjct: 758 L---IKNCTALHIQKVDLILQNTTVISEK--NKLESDYMATSAQLRITEQHFIELDENRQ 812
Query: 781 HCRKHLSDAKRQAESIAFITPE--LEKEF-LEMPTTIEELEA----AIQD---NISQANS 830
+ + ++A + + E + +E+ ++PT + A QD + + ++
Sbjct: 813 RLLQKCKELMKRARQVCNLGAEQTVPQEYQTQVPTIPNGHNSSPPMAFQDLPNTLDEIDA 872
Query: 831 IFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLVAQINE 890
+ ++ + + + TK+E +E+++ AE+ +K+ L R ++Q+ E
Sbjct: 873 LLTEERSRASCFTGLNPTVVEEYTKRE---EEIEQLTAELK-IKKVELDKYRENISQVKE 928
Query: 891 TFSRNFQEM 899
+ +E+
Sbjct: 929 RWLNPLKEL 937
Score = 606 (218.4 bits), Expect = 6.1e-56, P = 6.1e-56
Identities = 153/395 (38%), Positives = 227/395 (57%)
Query: 644 QTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALA 703
Q EQ+ I + L+ ++ N+ + E+RK IN++K KL + E + I A
Sbjct: 708 QLEQK-ISSKLGSLKLMEQDTCNLEE-EERKASTKIKEINIQKAKLVT-ELTNLIKNCTA 764
Query: 704 KLVDQAADLNIQQFKYAIEIKNLLVE---IVSCKWSYAEKHMASIEFDAKIRELEFNLKQ 760
+ Q DL +Q E KN L S + E+H IE D + L K+
Sbjct: 765 LHI-QKVDLILQNTTVISE-KNKLESDYMATSAQLRITEQHF--IELDENRQRLLQKCKE 820
Query: 761 HEKLALQA-SLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEA 819
K A Q +L E + E+ + + S +P + F ++P T++E++A
Sbjct: 821 LMKRARQVCNLGAEQTVPQ-EY-QTQVPTIPNGHNS----SPPMA--FQDLPNTLDEIDA 872
Query: 820 AIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLP 879
+ + S+A+ LN +++EY R+ +IE L+ + + K EL ++ I +KE+WL
Sbjct: 873 LLTEERSRASCFTGLNPTVVEEYTKREEEIEQLTAELKIKKVELDKYRENISQVKERWLN 932
Query: 880 TLRNLVAQINETFSRNFQEMAVAGEVSLD-EHESDFDKFGILIKVKFRQSGQLEVLSAHH 938
L+ LV +INE FS F M AGEV L E+E D+DK+GI I+VKFR S +L L+ HH
Sbjct: 933 PLKELVEKINEKFSYFFSSMQCAGEVDLHTENEEDYDKYGIRIRVKFRSSTELHELTPHH 992
Query: 939 QSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTPQCF 998
QSGGERSVST+LYL++LQ+L CPFRVVDEINQGMDPINER++F+ +V A + NT Q F
Sbjct: 993 QSGGERSVSTMLYLMALQELNRCPFRVVDEINQGMDPINERRVFEMVVNTACKENTSQYF 1052
Query: 999 LLTPKLLPDLEYSEACSILNIMNGPWIEQPSKVWS 1033
+TPKLL +L YSE ++L + NGP + +P++ W+
Sbjct: 1053 FITPKLLQNLPYSEKMTVLFVYNGPHMLEPNR-WN 1086
>WB|WBGene00016151 [details] [associations]
symbol:smc-5 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0007126 "meiosis" evidence=IMP] [GO:0045132
"meiotic chromosome segregation" evidence=IMP] [GO:0000794
"condensed nuclear chromosome" evidence=IDA] InterPro:IPR027131
InterPro:IPR003395 Pfam:PF02463 GO:GO:0009792 GO:GO:0045132
eggNOG:COG1196 EMBL:FO080349 PANTHER:PTHR19306:SF1 OMA:GMDPRNE
GeneTree:ENSGT00550000074963 RefSeq:NP_494935.1
ProteinModelPortal:Q18237 SMR:Q18237 STRING:Q18237 PaxDb:Q18237
EnsemblMetazoa:C27A2.1 GeneID:173874 KEGG:cel:CELE_C27A2.1
UCSC:C27A2.1 CTD:173874 WormBase:C27A2.1 HOGENOM:HOG000017087
InParanoid:Q18237 NextBio:881489 Uniprot:Q18237
Length = 1076
Score = 430 (156.4 bits), Expect = 1.7e-65, Sum P(2) = 1.7e-65
Identities = 145/579 (25%), Positives = 261/579 (45%)
Query: 17 DYMPGNIIEIELHNFMTFDHLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGR 76
DY G+++ + HNF+T++H P + LN+++G NGSGKSS++C I LA GG + LGR
Sbjct: 16 DYPDGSLLRVVFHNFLTYEHTSFLPTASLNMILGHNGSGKSSIICGICLACGGSPKSLGR 75
Query: 77 ATSIGAYVKRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEIT 136
+ I Y++ G GY++I++ D ++ + I + ++ N + E+ ++
Sbjct: 76 SERIVEYIRHGCTEGYVEIAI-ADKQKGPQVVRLTIRVGEQPKYRLNDSATTQSEIADLR 134
Query: 137 KRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTI 196
K +NIQ++N FL QD+V F++ S ++LL TEKA L QH L+++ +I
Sbjct: 135 KHYNIQIDNPCAFLAQDKVKSFSEQSSIELLRNTEKAAS-ADLDQQHIDLMKQREDSTSI 193
Query: 197 E--CTVKRNGDTLNQLKALNVEQEKD---VERVRQRAELLEKVESMKKKLPWLKYDMKKA 251
E CT N +K L E K VE R++ L K+ ++KK+ ++++
Sbjct: 194 EDKCTTSENA-----IKRLEDEIGKIMPLVENYRKKLALQSKLRLLEKKMKIMEFEKFDR 248
Query: 252 EYIXXXXXXXXXXXXXXXXXNTLHEFSKP---IEG--KKQEKAI--LDGDCKKLSSLINE 304
EY ++ E K +E KK I + C ++ + + E
Sbjct: 249 EYKAELQNMDGAMIEYREVEKSIAECEKHRKNLEDRIKKDRSQISQMQRSCNEILAKVQE 308
Query: 305 NSKRRM--DFLEKVDQGVQVQGKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPA 362
+++ D +++ +++ K I +AR T+
Sbjct: 309 KGDKKLMEDMMQRAK--AKLESAKKAADQHEKDVEKARKMIDQARARLQEAV---DTLNG 363
Query: 363 YEPPHDKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKL 422
YE +++ L + + +R + E++ I + +RQ ++ +D E++N++L
Sbjct: 364 YEEFQSEMKSLEQKY------STAERDSRQEEDAI-QKKSYEMRQLENKKRD-EEQNSQL 415
Query: 423 -----LHALRNSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLEDHVGH 477
L+N ++ +AY W QQ+R + + Y P++ V + A A LE+ VG
Sbjct: 416 NRQDRYRVLQNFSSD-ASKAYRWYQQNRSQFKGDVYMPIMDMVLKTPEA-AKALENSVGV 473
Query: 478 YIWKSFITQDAGDRDFLAKNLKPFDVPI-LNYVSNESSRKEPF--QISEEMRALGISARL 534
F+ D L N K I + V E E Q+ E+ LG +
Sbjct: 474 RDRTMFVC--CYKEDELLINGKQHSWRINTSVVPAEKIYSEDIDAQLPSELSRLGFKYLV 531
Query: 535 DQVFDAPHAVKEVLISQFGLDSSYIGSKETDQKADNVAK 573
FDAP +K+ L + GL+ G + ++K V++
Sbjct: 532 SNCFDAPAPLKQFLCNVSGLNRIPFGGSDVEKKIAEVSQ 570
Score = 326 (119.8 bits), Expect = 1.7e-65, Sum P(2) = 1.7e-65
Identities = 113/386 (29%), Positives = 193/386 (50%)
Query: 650 IEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEK--EDDINTALAKLVD 707
+ E AKL+ E+++I IE E + N+ K+ + +K E+ I +++D
Sbjct: 682 LASEMAKLEALENEVVDISAIE-------EEYANVEKKAILETKKMLENSIRWH-KEIID 733
Query: 708 QAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQ 767
+ + I + +I K+ V+ S AE H + +E D K ++K + L+
Sbjct: 734 KHRLIGIFELSESI-CKSR----VNKSNSEAETHRSKLE-DLK------SVKDAAEDLLK 781
Query: 768 ASLHYEDCKKE--VEHCRKHLSDAKRQAESIAFITPELEKEFLE--MPTTIEELEAAIQD 823
+L+++ ++ C D + + + I L K F E +PT + L+ AI
Sbjct: 782 TALNHKKAAASALMKECSLKTLDESKMSPAENKIYSSLVKMFEEADVPTDMNTLDQAITS 841
Query: 824 NISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEI-DALKEK---WLP 879
++ ++ +E R + ++D ++ +++L A I D L ++ W
Sbjct: 842 EKTRLKLAEDSGEDGSIVHEQRLKVLDDDLVLEKTRQEKLIENRARIHDKLGDEINNWRK 901
Query: 880 TLRNLVAQINETFSRNFQEMAVAGEVSLD--EHESDFDKFGILIKVKFRQSGQLEVLSAH 937
+ ++ QIN + + F + GEVSL+ E+ D +K+GI+I V FR+ ++ L
Sbjct: 902 EVETMIEQINVNYVQFFDSLGCRGEVSLEVPENPLDIEKYGIMIMVCFRKGESMKRLDNK 961
Query: 938 HQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVR----AASQPN 993
QSGGERSV+T+LYL++LQ L PFR +DEINQGMDP NERK+F +V +
Sbjct: 962 VQSGGERSVATMLYLLALQQLCPVPFRCIDEINQGMDPTNERKVFDIMVGMWNGTTGTLS 1021
Query: 994 TPQCFLLTPKLLPDLEYSEACSILNI 1019
Q FLL+PKLL L+ E +I+ +
Sbjct: 1022 KTQYFLLSPKLLHGLDMRENVNIVMV 1047
Score = 41 (19.5 bits), Expect = 3.6e-24, Sum P(2) = 3.6e-24
Identities = 7/37 (18%), Positives = 22/37 (59%)
Query: 644 QTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMEN 680
Q+E + +E + + +++ + + +Q + + R++EN
Sbjct: 368 QSEMKSLEQKYSTAERDSRQEEDAIQKKSYEMRQLEN 404
>UNIPROTKB|Q802R9 [details] [associations]
symbol:smc5 "Structural maintenance of chromosomes protein
5" species:31033 "Takifugu rubripes" [GO:0000722 "telomere
maintenance via recombination" evidence=ISS] [GO:0000724
"double-strand break repair via homologous recombination"
evidence=ISS] [GO:0000781 "chromosome, telomeric region"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0016605 "PML
body" evidence=ISS] [GO:0030915 "Smc5-Smc6 complex" evidence=ISS]
[GO:0034184 "positive regulation of maintenance of mitotic sister
chromatid cohesion" evidence=ISS] [GO:0045842 "positive regulation
of mitotic metaphase/anaphase transition" evidence=ISS] [GO:0090398
"cellular senescence" evidence=ISS] InterPro:IPR027131
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0051301
GO:GO:0007067 GO:GO:0016605 HSSP:P58301 GO:GO:0000724 GO:GO:0000781
GO:GO:0000722 GO:GO:0090398 GO:GO:0045842 eggNOG:COG1196
GO:GO:0030915 GO:GO:0034184 CTD:23137 PANTHER:PTHR19306:SF1
EMBL:AJ543329 RefSeq:NP_001027801.1 UniGene:Tru.1989
ProteinModelPortal:Q802R9 STRING:Q802R9 GeneID:445963
KEGG:tru:445963 InParanoid:Q802R9 Uniprot:Q802R9
Length = 1092
Score = 683 (245.5 bits), Expect = 8.8e-65, P = 8.8e-65
Identities = 220/908 (24%), Positives = 405/908 (44%)
Query: 19 MPGNIIEIELHNFMTFDHLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRAT 78
M G+I+ I + NF+T+D+ PG LN+++G NG+GKSS+VCAI L L G T +LGR
Sbjct: 40 MDGSILRITMRNFLTYDYTEVYPGPNLNMIVGANGTGKSSIVCAICLGLAGKTAVLGRGD 99
Query: 79 SIGAYVKRGEESGYIKISLRGDTKEEHLTIMRKIDTRN-KSEWFFNGKVVPKGEVLEITK 137
+G YVKRG + G I+I L +L I R+I N +S W NGK + V E K
Sbjct: 100 KVGLYVKRGCQKGSIEIELY--KHGGNLVITREIHVENNQSHWMINGKQRNQKAVEEEVK 157
Query: 138 RFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIE 197
IQV+NL QFLPQ++V EFAK+S +LLE TEK+VG P++ HC L SK + +E
Sbjct: 158 NLCIQVSNLCQFLPQEKVGEFAKMSKTELLEATEKSVGPPEMFEFHCELKNFRSKERELE 217
Query: 198 CTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAEYIXXX 257
TV + + K N + DV R ++ L+ +E ++KK PW++Y+ + E
Sbjct: 218 NTVTEKTKYIEKAKQRNERNKHDVNRYYEKKRHLDMIELLEKKKPWVEYESTRKELESVK 277
Query: 258 XXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENS---KRRMDFLE 314
++ + I+ + D K ++ I + + K++ D L+
Sbjct: 278 REREEAKRNLSALRHSQAPMIRKIKEIEDRLQPFDDQIKSQTAAIKDAALKCKQKQDQLD 337
Query: 315 KVDQGVQ-VQGKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPAYEPPHDKIEKL 373
+ + ++ + +K + + P P +I +
Sbjct: 338 RKQKEIEDINQAFKLKEMEEDDHQKRISNTRRIIEDLRTELAKVEDQPDVTP---RINDV 394
Query: 374 GSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNN--KLLHALRNSGA 431
S++ Q + R+ EK ++ + QC K + D NN K+
Sbjct: 395 NSELRRN--QIERARID-GEKCELCREKDNAFAQCRSLQKKLNDMNNLMKVKEEKLRGRH 451
Query: 432 ENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLEDHVGHYIWKSFITQDAGDR 491
+ A WL+Q+R+ Y P+LLE+NV + A Y+E+H+ ++F+ Q D
Sbjct: 452 RDTHAALQWLRQNRNRFRGNVYEPMLLEINVKDHRFAKYVENHISFQDLRAFVFQRKEDM 511
Query: 492 D-FLAKNLKPFDVPILNYVSNESSRK--EPFQISEEMRALGISARLDQVFDAPHAVKEVL 548
+ F+++ ++ + + + E SR +P Q E++R G L ++FDAP V L
Sbjct: 512 EIFMSEVRDKMNLKVNSISAPEQSRSKAQPSQNIEDLRRFGFFTYLREMFDAPDEVMSYL 571
Query: 549 ISQFGLDSSYIGSKETDQKADNVAK-LGILDFWTPENHYRWSISRYGGHVSASVEPVNQS 607
Q+ + + +G+++T V + L + +T + Y S Y +S PVN S
Sbjct: 572 CQQYNVHNVPVGTEQTKTMIRQVIEELNLRVLFTLDERYMLKRSVYSKMISTINSPVNPS 631
Query: 608 RLLLCSVDGNXXXXXXXXXXXXXXXXXXXXXXXXXMQTEQRLIEDEAAKLQKEREEIINI 667
+ L +VD +Q E +++ +L E++++ +
Sbjct: 632 QYLSIAVDAEEKRQLEQELNACELRFREIDERLKALQRETAVLDRRDNELLAEKKKLSEL 691
Query: 668 VQIEKRKRREMENHINLRKRKLESIEKE-DDINTALAKLVDQAADLNIQQ------FKYA 720
K K+R++E I+ ++ L +E+ D+ + ++ + +N Q+ F +
Sbjct: 692 ----KGKKRQLEQKISTKQDSLRQMEQNVTDLKKIEEETKEKVSAVNSQKVTIVKAFIAS 747
Query: 721 IEIK-NLLVEIV--SCKWSYAEKHMASIEFDAK-----IRELEFNLKQHEKLALQASLHY 772
I++K L +E V S + +E D + +R ++ Q E+ +Q +
Sbjct: 748 IKLKATLTMEKVYLSLEMMGLSAEKTKLEHDFREGASLLRSMDQRCSQLEQRKVQLTEQG 807
Query: 773 EDCKKEVEH-CRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSI 831
+ K + C +D+ +E + + + +L +P+ + A + D +S+
Sbjct: 808 KGQMKRAKSICNMQPNDSL--SEELRNVRVYVIPPYLCVPSPLMAF-AKLPDTPDDIDSM 864
Query: 832 FFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLVAQINET 891
++ + + + D + + + KEL+ L E K+ L + R +++ E
Sbjct: 865 LNEERSRSECFTGLSENVVDEYNRSDQEIKELENELEE----KKNALESYRQNISEAKER 920
Query: 892 FSRNFQEM 899
+ +++
Sbjct: 921 WLNPLKQL 928
Score = 543 (196.2 bits), Expect = 5.6e-49, P = 5.6e-49
Identities = 129/389 (33%), Positives = 214/389 (55%)
Query: 655 AKLQKEREEIINIVQIEKRKRREMENHI-NLRKRKLESIEKEDDINTALAKLVDQ----- 708
++L+ ++ ++ + ++ R+ME ++ +L+K + E+ EK +N+ +V
Sbjct: 689 SELKGKKRQLEQKISTKQDSLRQMEQNVTDLKKIEEETKEKVSAVNSQKVTIVKAFIASI 748
Query: 709 --AADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQ-HEKLA 765
A L +++ ++E+ L E + + E D + +LE Q E+
Sbjct: 749 KLKATLTMEKVYLSLEMMGLSAEKTKLEHDFREGASLLRSMDQRCSQLEQRKVQLTEQGK 808
Query: 766 LQASLHYEDCKKEV-EHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDN 824
Q C + + + L + + P F ++P T +++++ + +
Sbjct: 809 GQMKRAKSICNMQPNDSLSEELRNVRVYVIPPYLCVPSPLMAFAKLPDTPDDIDSMLNEE 868
Query: 825 ISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNL 884
S++ L++N++ EY ++I++L + E K L+ + I KE+WL L+ L
Sbjct: 869 RSRSECFTGLSENVVDEYNRSDQEIKELENELEEKKNALESYRQNISEAKERWLNPLKQL 928
Query: 885 VAQINETFSRNFQEMAVAGEVSL-DEHESDFDKFGILIKVKFRQSGQLEVLSAHHQSGGE 943
V QINE F+ F+ M AGEV L E E D+DK+GI I+VKF + QL L+ HQSGGE
Sbjct: 929 VEQINEKFTAFFRSMNCAGEVDLHSEKEEDYDKYGIRIRVKFHSNTQLHELTPFHQSGGE 988
Query: 944 RSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTPQCFLLTPK 1003
RSVST+LYL+SLQ+L CPFRVVDEINQGMDPINER++F +V A + T Q F +TPK
Sbjct: 989 RSVSTMLYLMSLQELNRCPFRVVDEINQGMDPINERRVFDIVVGTACKERTSQYFFITPK 1048
Query: 1004 LLPDLEYSEACSILNIMNGPWIEQPSKVW 1032
LL +L+Y+E ++L + NG ++ P++ W
Sbjct: 1049 LLQNLKYAEEMTVLCVHNGAYMLPPNQ-W 1076
>UNIPROTKB|Q8IY18 [details] [associations]
symbol:SMC5 "Structural maintenance of chromosomes protein
5" species:9606 "Homo sapiens" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0005634 "nucleus" evidence=ISS]
[GO:0030915 "Smc5-Smc6 complex" evidence=IDA] [GO:0000724
"double-strand break repair via homologous recombination"
evidence=IMP] [GO:0006303 "double-strand break repair via
nonhomologous end joining" evidence=IMP] [GO:0000722 "telomere
maintenance via recombination" evidence=IMP] [GO:0000781
"chromosome, telomeric region" evidence=IDA] [GO:0016605 "PML body"
evidence=IDA] [GO:0090398 "cellular senescence" evidence=IMP]
[GO:0034184 "positive regulation of maintenance of mitotic sister
chromatid cohesion" evidence=IMP] [GO:0045842 "positive regulation
of mitotic metaphase/anaphase transition" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR027131
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0051301
GO:GO:0007067 GO:GO:0016605 GO:GO:0000724 GO:GO:0000781
GO:GO:0000722 GO:GO:0090398 GO:GO:0045842 eggNOG:COG1196
GO:GO:0030915 EMBL:AL162390 GO:GO:0034184 HSSP:P60881 CTD:23137
HOGENOM:HOG000154342 HOVERGEN:HBG093963 OrthoDB:EOG4VMFDP
PANTHER:PTHR19306:SF1 EMBL:AJ310550 EMBL:AB011166 EMBL:BC017666
EMBL:BC038225 IPI:IPI00413265 RefSeq:NP_055925.2 UniGene:Hs.534189
UniGene:Hs.601181 ProteinModelPortal:Q8IY18 SMR:Q8IY18
IntAct:Q8IY18 STRING:Q8IY18 PhosphoSite:Q8IY18 DMDM:122070387
PaxDb:Q8IY18 PRIDE:Q8IY18 DNASU:23137 Ensembl:ENST00000361138
GeneID:23137 KEGG:hsa:23137 UCSC:uc004ahr.2 GeneCards:GC09P072873
H-InvDB:HIX0201342 HGNC:HGNC:20465 MIM:609386 neXtProt:NX_Q8IY18
PharmGKB:PA134993662 InParanoid:Q8IY18 OMA:GMDPRNE ChiTaRS:SMC5
GenomeRNAi:23137 NextBio:44403 Bgee:Q8IY18 CleanEx:HS_SMC5
Genevestigator:Q8IY18 Uniprot:Q8IY18
Length = 1101
Score = 676 (243.0 bits), Expect = 6.2e-64, P = 6.2e-64
Identities = 215/912 (23%), Positives = 413/912 (45%)
Query: 8 RLKVSRGEDDYMPGNIIEIELHNFMTFDHLICKPGSRLNLVIGPNGSGKSSLVCAIALAL 67
+L + + ++ G+I+ I + NF+T+D PG LN+++G NG+GKSS+VCAI L L
Sbjct: 38 QLPLLQSSGPFVEGSIVRISMENFLTYDICEVSPGPHLNMIVGANGTGKSSIVCAICLGL 97
Query: 68 GGDTQLLGRATSIGAYVKRGEESGYIKISLRGDTKEEHLTIMRKIDT-RNKSEWFFNGKV 126
G +GRA +G +VKRG G ++I L +L I R+ID +N+S WF N K
Sbjct: 98 AGKPAFMGRADKVGFFVKRGCSRGMVEIELF--RASGNLVITREIDVAKNQSFWFINKKS 155
Query: 127 VPKGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCAL 186
+ V E NIQV NL QFLPQD+V EFAKLS ++LLE TEK++G P++ HC L
Sbjct: 156 TTQKIVEEKVAALNIQVGNLCQFLPQDKVGEFAKLSKIELLEATEKSIGPPEMHKYHCEL 215
Query: 187 VEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKY 246
K K +E + K + L ++ N ++DVER +R L+ +E ++ K PW++Y
Sbjct: 216 KNLREKEKQLETSCKEKTEYLQKMVQRNERYKQDVERFYERKRHLDLIEMLEAKRPWVEY 275
Query: 247 DMKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENS 306
+ + EY + IE + E+ L+ K+ ++ I E S
Sbjct: 276 ENVRQEYEEVKLVRDRVKEEVRKLKEGQIPVTCRIEEMENERHNLEARIKEKATDIKEAS 335
Query: 307 ---KRRMDFLEKVDQGVQ-VQGKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPA 362
K++ D +E+ D+ ++ +Q K +
Sbjct: 336 QKCKQKQDVIERKDKHIEELQQALIVKQNEELDRQRRIGNTRKMIEDLQNELKTTENCEN 395
Query: 363 YEPPHDKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKD-MEDKNNK 421
+P D I +I + + + K + + L + K ++ R + M K +K
Sbjct: 396 LQPQIDAITNDLRRIQDEKALCEGEIIDKRRERETLEKEKKSVDDHIVRFDNLMNQKEDK 455
Query: 422 LLHALRNSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLEDHVGHYIWK 481
L R++ ++A WL+ +R + + P++L +N+ + +A Y+E+H+ +
Sbjct: 456 LRQRFRDT-----YDAVLWLRNNRDKFKQRVCEPIMLTINMKDNKNAKYIENHIPSNDLR 510
Query: 482 SFITQDAGDRDFLAKNLKPFDVPILNYV-SNESSR--KEPFQISEEMRALGISARLDQVF 538
+F+ + D + K ++ +N V + +SS K P + E++ G + L ++F
Sbjct: 511 AFVFESQEDMEVFLKEVRDNKKLRVNAVIAPKSSYADKAPSRSLNELKQYGFFSYLRELF 570
Query: 539 DAPHAVKEVLISQFGLDSSYIGSKETDQKADNVAK-LGILDFWTPENHYRWSISRYGGHV 597
DAP V L Q+ + +G+++T ++ + V + + +T E Y S Y V
Sbjct: 571 DAPDPVMSYLCCQYHIHEVPVGTEKTRERIERVIQETRLKQIYTAEEKYVVKTSFYSNKV 630
Query: 598 SASVEPVNQSRLLLCSVDGNXXXXXXXXXXXXXXXXXXXXXXXXXMQTEQRLIEDEAAKL 657
+S + ++ L +VD ++ + +E + +L
Sbjct: 631 ISSNTSLKVAQFLTVTVDLEQRRHLEEQLKEIHRKLQAVDSGLIALRETSKHLEHKDNEL 690
Query: 658 QKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKED-DINTALAKLVDQAADLNIQQ 716
+++++E++ K K+R++E I+ + L+ +E++ ++ K + ++N+Q+
Sbjct: 691 RQKKKELLE----RKTKKRQLEQKISSKLGSLKLMEQDTCNLEEEERKASTKIKEINVQK 746
Query: 717 FKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFN-LKQHEKLALQASLHYEDC 775
K E+ NL+ S + + + ++ +LE + + +L L H+ +
Sbjct: 747 AKLVTELTNLIKICTSLHIQKVDLILQNTTVISEKNKLESDYMAASSQLRLTEQ-HFIEL 805
Query: 776 KKEVEHCRKHLSDAKRQAESIAFITPE--LEKEFLEMPTTIEELEAAIQDNISQ--ANSI 831
+ + + + ++A + + E L +E+ TI + + Q N++
Sbjct: 806 DENRQRLLQKCKELMKRARQVCNLGAEQTLPQEYQTQVPTIPNGHNSSLPMVFQDLPNTL 865
Query: 832 FFLNQNILQEYEHRQRQIEDLSTK--QEADKKE--LKRFLAEIDALKEKWLPTLRNLVAQ 887
++ +L E R L+ QE K+E +++ E+ K + L R ++Q
Sbjct: 866 DEIDA-LLTEERSRASCFTGLNPTIVQEYTKREEEIEQLTEELKGKKVE-LDQYRENISQ 923
Query: 888 INETFSRNFQEM 899
+ E + +E+
Sbjct: 924 VKERWLNPLKEL 935
Score = 613 (220.8 bits), Expect = 1.0e-56, P = 1.0e-56
Identities = 154/395 (38%), Positives = 221/395 (55%)
Query: 644 QTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALA 703
Q EQ+ I + L+ ++ N+ + E+RK IN++K KL + + ++
Sbjct: 706 QLEQK-ISSKLGSLKLMEQDTCNLEE-EERKASTKIKEINVQKAKL--VTELTNLIKICT 761
Query: 704 KLVDQAADLNIQQFKYAIEIKNLLVE---IVSCKWSYAEKHMASIEFDAKIRELEFNLKQ 760
L Q DL +Q E KN L S + E+H IE D + L K+
Sbjct: 762 SLHIQKVDLILQNTTVISE-KNKLESDYMAASSQLRLTEQHF--IELDENRQRLLQKCKE 818
Query: 761 HEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAF-ITPELEKEFLEMPTTIEELEA 819
K A Q C E + + Q +I L F ++P T++E++A
Sbjct: 819 LMKRARQV------CNLGAEQTLPQ--EYQTQVPTIPNGHNSSLPMVFQDLPNTLDEIDA 870
Query: 820 AIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLP 879
+ + S+A+ LN I+QEY R+ +IE L+ + + K EL ++ I +KE+WL
Sbjct: 871 LLTEERSRASCFTGLNPTIVQEYTKREEEIEQLTEELKGKKVELDQYRENISQVKERWLN 930
Query: 880 TLRNLVAQINETFSRNFQEMAVAGEVSLD-EHESDFDKFGILIKVKFRQSGQLEVLSAHH 938
L+ LV +INE FS F M AGEV L E+E D+DK+GI I+VKFR S QL L+ HH
Sbjct: 931 PLKELVEKINEKFSNFFSSMQCAGEVDLHTENEEDYDKYGIRIRVKFRSSTQLHELTPHH 990
Query: 939 QSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTPQCF 998
QSGGERSVST+LYL++LQ+L CPFRVVDEINQGMDPINER++F+ +V A + NT Q F
Sbjct: 991 QSGGERSVSTMLYLMALQELNRCPFRVVDEINQGMDPINERRVFEMVVNTACKENTSQYF 1050
Query: 999 LLTPKLLPDLEYSEACSILNIMNGPWIEQPSKVWS 1033
+TPKLL +L YSE ++L + NGP + +P+ W+
Sbjct: 1051 FITPKLLQNLPYSEKMTVLFVYNGPHMLEPN-TWN 1084
>UNIPROTKB|D4A6A4 [details] [associations]
symbol:Smc5 "Protein Smc5" species:10116 "Rattus
norvegicus" [GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA] [GO:0030915 "Smc5-Smc6 complex"
evidence=IEA] InterPro:IPR027131 InterPro:IPR003395 Pfam:PF02463
RGD:1307492 GO:GO:0016605 GO:GO:0000724 GO:GO:0000781 GO:GO:0000722
GO:GO:0090398 GO:GO:0045842 GO:GO:0030915 GO:GO:0034184
OrthoDB:EOG4VMFDP PANTHER:PTHR19306:SF1 IPI:IPI00768547
Ensembl:ENSRNOT00000042241 ArrayExpress:D4A6A4 Uniprot:D4A6A4
Length = 1102
Score = 675 (242.7 bits), Expect = 8.3e-64, P = 8.3e-64
Identities = 216/901 (23%), Positives = 410/901 (45%)
Query: 18 YMPGNIIEIELHNFMTFDHLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRA 77
++ G+I+ I + NF+T+D PG LN++IG NG+GKSS+VCAI L L G +GRA
Sbjct: 48 FVEGSIVRIAMENFLTYDICEVSPGPHLNMIIGANGTGKSSIVCAICLGLAGKPAFMGRA 107
Query: 78 TSIGAYVKRGEESGYIKISLRGDTKEEHLTIMRKIDT-RNKSEWFFNGKVVPKGEVLEIT 136
+G +VKRG G ++I L + +L I R+ID +N+S WF N K V + V E
Sbjct: 108 DKVGFFVKRGCSKGLVEIELFRTSG--NLIITREIDVIKNQSFWFINKKPVTQKIVEEQV 165
Query: 137 KRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTI 196
NIQV NL QFLPQD+V EFAKLS ++LLE TEK++G P++ HC L K K +
Sbjct: 166 AALNIQVGNLCQFLPQDKVGEFAKLSKIELLEATEKSIGPPEMHRYHCELKNFREKEKQL 225
Query: 197 ECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAEYIXX 256
E + K + L+++ N ++DVER +R L+ +E ++ K PW++Y+ + EY
Sbjct: 226 ETSCKEKTEYLDKMIQRNERYKQDVERFYERKRHLDLIEMLEAKRPWVEYENVRQEYEGV 285
Query: 257 XXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENS---KRRMDFL 313
++ IE ++++ L+ K+ ++ I E S K+R D +
Sbjct: 286 KLVRDRVKEEVRKLKEGQIPMTRRIEEIERQRRTLEVRIKEKATDIKEASQKCKQRQDLI 345
Query: 314 EKVDQGV-QVQGKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPAYEPPHDKIEK 372
E+ D+ + ++Q K + +P D I
Sbjct: 346 ERKDRHIKELQQALTVKQNEEQDRQKRISNTRKMIEDLQNELRTAENCENLQPQIDAITN 405
Query: 373 LGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAE 432
++ E + + K ++++L + K R SD + ++ N+ LR +
Sbjct: 406 DLRRVQEEKALCEGEIIDKQREKEMLEKQK---RSVSDHITRFDNLMNQKEDKLRQRYRD 462
Query: 433 NIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLEDHVGHYIWKSFITQDAGDRD 492
++A WL+ +R + P++L +N+ + +A Y+E+H+ ++F+ + D +
Sbjct: 463 T-YDAVLWLRNNRDRFKQRVCEPIMLTINMKDNKNAKYVENHISSNDLRAFVFESQEDME 521
Query: 493 FLAKNLKPFDVPILNYVSNES---SRKEPFQISEEMRALGISARLDQVFDAPHAVKEVLI 549
+ ++ +N V + K P + E++ G + L ++FDAP V L
Sbjct: 522 IFLREVRDNKKLRVNAVIAPKISYADKAPSRSLNELKQYGFFSYLRELFDAPDPVMSYLC 581
Query: 550 SQFGLDSSYIGSKETDQKADNVAK-LGILDFWTPENHYRWSISRYGGHVSASVEPVNQSR 608
Q+ + +G++ T ++ + V + + +T E Y S Y V +S + ++
Sbjct: 582 CQYHIHEVPVGTERTRERIERVIQETRLKQIYTAEEKYVLKTSFYSNKVISSNTSLKVAQ 641
Query: 609 LLLCSVDGNXXXXXXXXXXXXXXXXXXXXXXXXXMQTEQRLIEDEAAKLQKEREEIINIV 668
L +VD ++ R +E + +L+ +++E++
Sbjct: 642 FLTVTVDLEQRRHLEEQLKEINRKLEAVDSGLVALRDTNRHLELKDNELRLKKKELLE-- 699
Query: 669 QIEKRKRREMENHINLRKRKLESIEKED-DINTALAKLVDQAADLNIQQFKYAIEIKNLL 727
K K+R++E I+ + + +E++ ++ K + ++N+Q+ K E+ L+
Sbjct: 700 --RKTKKRQLEQKISSKLASIRLMEQDTCNLEEEERKASTKIKEINVQKAKLVTELTGLV 757
Query: 728 VEIVSCKWSYAEKHMASIEFDAKIRELEFN-LKQHEKLAL--QASLHYEDCKKEV-EHCR 783
S + + + ++ +LE + + +L + Q + +D ++ + + C
Sbjct: 758 KICTSLHIQKVDLILQNTTVISEKNKLEADYMASSSQLRVTEQQFIELDDNRQRLLQKC- 816
Query: 784 KHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQ--ANSIFFLNQNILQE 841
K L RQ +++ + +EF TI ++ Q N++ ++ +L E
Sbjct: 817 KELMKRARQVCNLS-ADQAVPQEFQTQVPTIPNGHSSSPPMAFQDLPNTLDEIDA-LLTE 874
Query: 842 YEHRQRQIEDL--STKQEADKKELK-RFLAEIDALKEKWLPTLRNLVAQINETFSRNFQE 898
R L S +E K+E++ + L E K+ L R ++Q+ E + +E
Sbjct: 875 ERSRASCFTGLNPSVVEEYTKREIEIQQLTEELKGKKVELDEYRENISQVKERWLNPLKE 934
Query: 899 M 899
+
Sbjct: 935 L 935
Score = 608 (219.1 bits), Expect = 3.6e-56, P = 3.6e-56
Identities = 154/402 (38%), Positives = 232/402 (57%)
Query: 644 QTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALA 703
Q EQ+ I + A ++ ++ N+ + E+RK IN++K KL T L
Sbjct: 706 QLEQK-ISSKLASIRLMEQDTCNLEE-EERKASTKIKEINVQKAKLV---------TELT 754
Query: 704 KLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEF-NLKQHE 762
LV L+IQ K + ++N V +S K +MAS ++ E +F L +
Sbjct: 755 GLVKICTSLHIQ--KVDLILQNTTV--ISEKNKLEADYMASSS-QLRVTEQQFIELDDNR 809
Query: 763 KLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFIT--PELEK--------EFLEMPT 812
+ LQ CK+ ++ R+ + + QA F T P + F ++P
Sbjct: 810 QRLLQK------CKELMKRARQVCNLSADQAVPQEFQTQVPTIPNGHSSSPPMAFQDLPN 863
Query: 813 TIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDA 872
T++E++A + + S+A+ LN ++++EY R+ +I+ L+ + + K EL + I
Sbjct: 864 TLDEIDALLTEERSRASCFTGLNPSVVEEYTKREIEIQQLTEELKGKKVELDEYRENISQ 923
Query: 873 LKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLD-EHESDFDKFGILIKVKFRQSGQL 931
+KE+WL L+ LV +INE FS F M AGEV L E+E D+DK+GI I+VKFR S QL
Sbjct: 924 VKERWLNPLKELVEKINEKFSNFFSSMQCAGEVDLHTENEEDYDKYGIRIRVKFRSSTQL 983
Query: 932 EVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQ 991
L+ HHQSGGERSVST+LYL++LQ+L CPFRVVDEINQGMDPINER++F+ +V A +
Sbjct: 984 HELTPHHQSGGERSVSTMLYLMALQELNRCPFRVVDEINQGMDPINERRVFEMVVNTACK 1043
Query: 992 PNTPQCFLLTPKLLPDLEYSEACSILNIMNGPWIEQPSKVWS 1033
NT Q F +TPKLL +L YSE ++L + NGP + +P++ W+
Sbjct: 1044 ENTSQYFFITPKLLQNLPYSEKMTVLFVYNGPHMLEPNR-WN 1084
>MGI|MGI:2385088 [details] [associations]
symbol:Smc5 "structural maintenance of chromosomes 5"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000722 "telomere maintenance via recombination"
evidence=ISO] [GO:0000724 "double-strand break repair via
homologous recombination" evidence=ISO] [GO:0000781 "chromosome,
telomeric region" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005694 "chromosome" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0006310 "DNA
recombination" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0016605 "PML body"
evidence=ISO] [GO:0030915 "Smc5-Smc6 complex" evidence=ISO]
[GO:0034184 "positive regulation of maintenance of mitotic sister
chromatid cohesion" evidence=ISO] [GO:0045842 "positive regulation
of mitotic metaphase/anaphase transition" evidence=ISO] [GO:0051301
"cell division" evidence=IEA] [GO:0090398 "cellular senescence"
evidence=ISO] InterPro:IPR027131 InterPro:IPR003395 Pfam:PF02463
MGI:MGI:2385088 GO:GO:0005524 GO:GO:0051301 GO:GO:0007067
GO:GO:0016605 GO:GO:0000724 GO:GO:0000781 GO:GO:0000722
GO:GO:0090398 GO:GO:0045842 eggNOG:COG1196 GO:GO:0030915
GO:GO:0034184 CTD:23137 HOGENOM:HOG000154342 HOVERGEN:HBG093963
OrthoDB:EOG4VMFDP PANTHER:PTHR19306:SF1 OMA:GMDPRNE ChiTaRS:SMC5
EMBL:AJ534941 EMBL:BC007174 EMBL:BC038345 EMBL:AK122321
IPI:IPI00380203 IPI:IPI00620557 RefSeq:NP_001239613.1
RefSeq:NP_722503.1 UniGene:Mm.23267 ProteinModelPortal:Q8CG46
SMR:Q8CG46 STRING:Q8CG46 PhosphoSite:Q8CG46 PaxDb:Q8CG46
PRIDE:Q8CG46 Ensembl:ENSMUST00000087556 GeneID:226026
KEGG:mmu:226026 UCSC:uc008haa.1 UCSC:uc008hab.1
GeneTree:ENSGT00550000074963 InParanoid:Q8CG46 NextBio:377941
Bgee:Q8CG46 CleanEx:MM_SMC5 Genevestigator:Q8CG46 Uniprot:Q8CG46
Length = 1101
Score = 673 (242.0 bits), Expect = 1.4e-63, P = 1.4e-63
Identities = 216/909 (23%), Positives = 414/909 (45%)
Query: 13 RGEDDYMPGNIIEIELHNFMTFDHLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQ 72
R ++ G+I+ I + NF+T+D PG LN++IG NG+GKSS+VCAI L L G
Sbjct: 43 RPSGTFVEGSIVRIAMENFLTYDICEVSPGPHLNMIIGANGTGKSSIVCAICLGLAGKPA 102
Query: 73 LLGRATSIGAYVKRGEESGYIKISLRGDTKEEHLTIMRKIDT-RNKSEWFFNGKVVPKGE 131
+GRA +G +VKRG G ++I L + +L I R+ID +N+S WF N K V +
Sbjct: 103 FMGRADKVGFFVKRGCSKGLVEIELFRTSG--NLIITREIDVIKNQSFWFINKKPVTQKI 160
Query: 132 VLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSS 191
V E NIQV NL QFLPQD+V EFAKLS ++LLE TEK+VG P++ HC L
Sbjct: 161 VEEQVAALNIQVGNLCQFLPQDKVGEFAKLSKIELLEATEKSVGPPEMHRYHCELKNFRE 220
Query: 192 KLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKA 251
K K +E + K + L ++ N ++DVER +R L+ +E ++ K PW++Y+ +
Sbjct: 221 KEKQLETSCKEKTEYLEKMVQRNERYKQDVERFYERKRHLDLIEMLEAKRPWVEYENVRQ 280
Query: 252 EYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENS---KR 308
EY ++ IE +++ L+ K+ S+ I E S K+
Sbjct: 281 EYEGVKLIRDRVKEEVRKLKEGQIPMTRRIEEIDRQRHTLEVRIKEKSTDIKEASQKCKQ 340
Query: 309 RMDFLEKVDQGVQVQGKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPAYE---P 365
R D +E+ D+ Q++ + I R +T E P
Sbjct: 341 RQDLIERKDR--QIKELQQALTVKQNEELDRQKRISNTRKMIEDLQSELKTAENCENLQP 398
Query: 366 PHDKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHA 425
D + ++ E + + K ++++L + + R SD + ++ N+
Sbjct: 399 QIDTVTNDLRRVQEEKALCEGEIIDKQREKEMLEKQR---RSVSDHITRFDNLMNQKEDK 455
Query: 426 LRNSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLEDHVGHYIWKSFIT 485
LR + ++A WL+ +R + P++L +N+ + +A Y+E+H+ ++F+
Sbjct: 456 LRQRYRDT-YDAVLWLRNNRDRFKQRVCEPIMLTINMKDNKNAKYVENHISSNDLRAFVF 514
Query: 486 QDAGDRDFLAKNLKPFDVPILNYVSNES---SRKEPFQISEEMRALGISARLDQVFDAPH 542
+ D + + ++ +N V + K P + +++ G + L ++FDAP
Sbjct: 515 ESQEDMEIFLREVRDNKKLRVNAVIAPKISYADKAPSRSLNDLKQYGFFSYLRELFDAPD 574
Query: 543 AVKEVLISQFGLDSSYIGSKETDQKADNVAK-LGILDFWTPENHYRWSISRYGGHVSASV 601
V L Q+ + +G++ T ++ + V + + +T E Y S Y V +S
Sbjct: 575 PVMSYLCCQYHIHEVPVGTERTRERIERVIQETRLKQIYTAEEKYVLKTSVYSNKVISSN 634
Query: 602 EPVNQSRLLLCSVDGNXXXXXXXXXXXXXXXXXXXXXXXXXMQTEQRLIEDEAAKLQKER 661
+ ++ L +VD ++ R +E + +L+ ++
Sbjct: 635 TSLKVAQFLTVTVDLEQRRHLEEQLKEMNRQLEAVDSGLAALRDTNRHLELKDNELRLKK 694
Query: 662 EEIINIVQIEKRKRREMENHINLRKRKLESIEKED-DINTALAKLVDQAADLNIQQFKYA 720
+E++ K ++R++E I+ + + +E++ ++ K + ++N+Q+ K
Sbjct: 695 KELLE----RKTRKRQLEQKISSKLASIRLMEQDTCNLEEEERKASTKIKEINVQKAKLV 750
Query: 721 IEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFN-LKQHEKLAL--QASLHYEDCKK 777
E+ L+ S + + + + ++ +LE + + +L + Q + +D ++
Sbjct: 751 TELTGLVKICTSFQIQKVDLILQNTTVISEKNKLEADYMASSSQLRVTEQQFIELDDNRQ 810
Query: 778 EV-EHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQ--ANSIFFL 834
+ + C++ + A RQ +++ + +EF TI ++ Q N++ +
Sbjct: 811 RLLQKCKELMKKA-RQVCNLS-ADQAVPQEFQTQVPTIPNGHSSSPPMAFQDLPNTLDEI 868
Query: 835 NQNILQEYEHRQRQIEDL--STKQEADKKE--LKRFLAEIDALKEKWLPTLRNLVAQINE 890
+ +L E R L S +E K+E +++ E+ K + L R ++Q+ E
Sbjct: 869 DA-LLTEERSRASCFTGLNPSVVEEYSKREVEIQQLTEELQGKKVE-LDEYRENISQVKE 926
Query: 891 TFSRNFQEM 899
+ +E+
Sbjct: 927 RWLNPLKEL 935
Score = 611 (220.1 bits), Expect = 1.7e-56, P = 1.7e-56
Identities = 145/400 (36%), Positives = 230/400 (57%)
Query: 646 EQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHI-NLRKRKLESIEKEDDINTALAK 704
E RL + E + + + ++ + + R ME NL + + ++ K +IN AK
Sbjct: 689 ELRLKKKELLERKTRKRQLEQKISSKLASIRLMEQDTCNLEEEERKASTKIKEINVQKAK 748
Query: 705 LVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKL 764
LV + L + I+ +L+++ + +EK+ ++ A +L +Q +L
Sbjct: 749 LVTELTGLVKICTSFQIQKVDLILQNTTV---ISEKNKLEADYMASSSQLRVTEQQFIEL 805
Query: 765 ALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFIT--PELEK--------EFLEMPTTI 814
+ CK+ ++ R+ + + QA F T P + F ++P T+
Sbjct: 806 DDNRQRLLQKCKELMKKARQVCNLSADQAVPQEFQTQVPTIPNGHSSSPPMAFQDLPNTL 865
Query: 815 EELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALK 874
+E++A + + S+A+ LN ++++EY R+ +I+ L+ + + K EL + I +K
Sbjct: 866 DEIDALLTEERSRASCFTGLNPSVVEEYSKREVEIQQLTEELQGKKVELDEYRENISQVK 925
Query: 875 EKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLD-EHESDFDKFGILIKVKFRQSGQLEV 933
E+WL L+ LV +INE FS F M AGEV L E+E D+DK+GI I+VKFR S QL
Sbjct: 926 ERWLNPLKELVEKINEKFSNFFSSMQCAGEVDLHTENEEDYDKYGIRIRVKFRSSTQLHE 985
Query: 934 LSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPN 993
L+ HHQSGGERSVST+LYL++LQ+L CPFRVVDEINQGMDPINER++F+ +V A + N
Sbjct: 986 LTPHHQSGGERSVSTMLYLMALQELNRCPFRVVDEINQGMDPINERRVFEMVVNTACKEN 1045
Query: 994 TPQCFLLTPKLLPDLEYSEACSILNIMNGPWIEQPSKVWS 1033
T Q F +TPKLL +L YSE ++L + NGP + +P++ W+
Sbjct: 1046 TSQYFFITPKLLQNLPYSEKMTVLFVYNGPHMLEPNR-WN 1084
>SGD|S000005394 [details] [associations]
symbol:SMC5 "Component of the SMC5-SMC6 complex" species:4932
"Saccharomyces cerevisiae" [GO:0005634 "nucleus" evidence=IEA;IDA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0003684 "damaged DNA binding" evidence=IDA] [GO:0071139
"resolution of recombination intermediates" evidence=IMP]
[GO:0000725 "recombinational repair" evidence=IPI] [GO:0003697
"single-stranded DNA binding" evidence=IDA] [GO:0016887 "ATPase
activity" evidence=IDA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005694 "chromosome" evidence=IEA] [GO:0006310 "DNA
recombination" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA;IDA;IMP] [GO:0000724 "double-strand break repair via
homologous recombination" evidence=IEA] [GO:0030915 "Smc5-Smc6
complex" evidence=IEA;IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR027131 InterPro:IPR003395 SGD:S000005394
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 EMBL:BK006948
GO:GO:0003684 GO:GO:0016887 GO:GO:0003697 GO:GO:0000725
eggNOG:COG1196 GO:GO:0030915 PDB:3HTK PDBsum:3HTK GO:GO:0034500
PANTHER:PTHR19306:SF1 OMA:GMDPRNE GeneTree:ENSGT00550000074963
OrthoDB:EOG48KVKB EMBL:Z74776 PIR:S66717 RefSeq:NP_014608.1
ProteinModelPortal:Q08204 SMR:Q08204 DIP:DIP-1979N IntAct:Q08204
MINT:MINT-404105 STRING:Q08204 PaxDb:Q08204 EnsemblFungi:YOL034W
GeneID:854123 KEGG:sce:YOL034W CYGD:YOL034w HOGENOM:HOG000141775
EvolutionaryTrace:Q08204 NextBio:975828 Genevestigator:Q08204
GermOnline:YOL034W GO:GO:0071139 Uniprot:Q08204
Length = 1093
Score = 412 (150.1 bits), Expect = 1.7e-63, Sum P(2) = 1.7e-63
Identities = 124/378 (32%), Positives = 192/378 (50%)
Query: 671 EKRKRREMENHINLRKRKLESI-EKEDDINTALAKLVDQAA-DLNIQQFKYAIEIKNLLV 728
E + E+ +RK +E++ EK D + K V Q D++ Q + ++ ++LL
Sbjct: 704 EAHQLNEIRKKYTMRKSTIETLREKLDQLKREARKDVSQKIKDIDDQIQQLLLKQRHLLS 763
Query: 729 EIVSCKWSY--AEKHMAS---IEFDAKIRELEFN--LKQHEKLALQASLHYEDCKKEVEH 781
++ S S +K + S ++F+A+ ++ N + + YED KK V+
Sbjct: 764 KMASSMKSLKNCQKELISTQILQFEAQNMDVSMNDVIGFFNEREADLKSQYEDKKKFVKE 823
Query: 782 CRK--HLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAA-IQDNISQANS-IFFLNQN 837
R R+ S T E + E + +QD + + S I +N +
Sbjct: 824 MRDTPEFQSWMREIRSYDQDTKEKLNKVAEKYEEEGNFNLSFVQDVLDKLESEIAMVNHD 883
Query: 838 -----ILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLVAQINETF 892
IL + R++E +Q D + +K L E A+ E P L ++V++I+ F
Sbjct: 884 ESAVTILDQVTAELRELEHTVPQQSKDLETIKAKLKEDHAVLE---PKLDDIVSKISARF 940
Query: 893 SRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVLSAHHQSGGERSVSTILYL 952
+R F + AG V L E D+ ++ I I VKFR + L+ L +H QSGGER+VST+LY+
Sbjct: 941 ARLFNNVGSAGAVRL-EKPKDYAEWKIEIMVKFRDNAPLKKLDSHTQSGGERAVSTVLYM 999
Query: 953 VSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTPQCFLLTPKLLPDLEYSE 1012
++LQ+ T+ PFRVVDEINQGMD NER + + +V A NT Q FL+TPKLL L Y E
Sbjct: 1000 IALQEFTSAPFRVVDEINQGMDSRNERIVHKAMVENACAENTSQYFLITPKLLTGLHYHE 1059
Query: 1013 ACSILNIMNGPWIEQPSK 1030
I +M G WI PS+
Sbjct: 1060 KMRIHCVMAGSWIPNPSE 1077
Score = 326 (119.8 bits), Expect = 1.7e-63, Sum P(2) = 1.7e-63
Identities = 83/251 (33%), Positives = 146/251 (58%)
Query: 4 PRVKRLKVSRGE-DDYMPGNIIEIELHNFMTFDHLICKPGSRLNLVIGPNGSGKSSLVCA 62
PR KR+K+++ + + PG+II+I L +F+T+ LN++IGPNGSGKS+ VCA
Sbjct: 22 PRSKRVKIAKPDLSSFQPGSIIKIRLQDFVTYTLTEFNLSPSLNMIIGPNGSGKSTFVCA 81
Query: 63 IALALGGDTQLLGRATSIGAYVKRGEESGYIKISLRG----------DTKEEHLTIMRKI 112
+ L L G + +GR+ + ++K G++ I+I+L+ D ++E + I R I
Sbjct: 82 VCLGLAGKPEYIGRSKKVEDFIKNGQDVSKIEITLKNSPNVTDIEYIDARDETIKITRII 141
Query: 113 DTRNK--SEWFFNGKVVPKGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEET 170
TR+K S++ N V + V + + NIQ++NL QFL Q+RV EFA+L VKLL ET
Sbjct: 142 -TRSKRRSDYLINDYQVSESVVKTLVAQLNIQLDNLCQFLSQERVEEFARLKSVKLLVET 200
Query: 171 EKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAEL 230
+++ L V +++ +L+ E +++++ D + K +++ QE D ++R+ E
Sbjct: 201 IRSIDASLLDV-----LDELRELQGNEQSLQKDLD-FKKAKIVHLRQESD--KLRKSVES 252
Query: 231 LEKVESMKKKL 241
L ++ K ++
Sbjct: 253 LRDFQNKKGEI 263
Score = 59 (25.8 bits), Expect = 2.0e-35, Sum P(2) = 2.0e-35
Identities = 24/80 (30%), Positives = 40/80 (50%)
Query: 382 VQANQKRLQKS---EKEKI--LNQNKLTLRQCSDRLKDMEDKNNKL-LHALRNSGAENIF 435
+Q N++ LQK +K KI L Q LR+ + L+D ++K ++ LH+
Sbjct: 218 LQGNEQSLQKDLDFKKAKIVHLRQESDKLRKSVESLRDFQNKKGEIELHSQ--------L 269
Query: 436 EAYCWLQQHRHELN--KEAY 453
Y ++ H+ +LN KE Y
Sbjct: 270 LPYVKVKDHKEKLNIYKEEY 289
Score = 52 (23.4 bits), Expect = 4.3e-25, Sum P(3) = 4.3e-25
Identities = 29/144 (20%), Positives = 63/144 (43%)
Query: 659 KEREEIINIVQIEKRKRREMENHINLRKRK-LESIEKEDDINTALAKLVDQAADLNIQQF 717
K+++ N + + + E+ +L+ + L++ EK ++I L + D+ Q
Sbjct: 301 KDKKPFANTKKTLENQVEELTEKCSLKTDEFLKAKEKINEIFEKLNTIRDEVIKKKNQNE 360
Query: 718 KYAIEIKNLLVEIVSCKWSY--AEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYEDC 775
Y K L I+S K + +++ +A K + ++K+ E + + + D
Sbjct: 361 YYRGRTKKLQATIISTKEDFLRSQEILAQTHLPEKSVFEDIDIKRKEIINKEGEIR--DL 418
Query: 776 KKEVE---HCRKH-LSDAKRQAES 795
E++ + H + +RQAES
Sbjct: 419 ISEIDAKANAINHEMRSIQRQAES 442
Score = 47 (21.6 bits), Expect = 1.1e-24, Sum P(3) = 1.1e-24
Identities = 16/59 (27%), Positives = 34/59 (57%)
Query: 367 HDKIEKLGSQILELGVQANQKRLQ-KSEKEKILNQNKLTLRQ-CSDRLKDMEDKNNKLL 423
+D I + Q+ E+ + ++ ++ +EK L+Q K R+ S ++KD++D+ +LL
Sbjct: 698 NDDINREAHQLNEIRKKYTMRKSTIETLREK-LDQLKREARKDVSQKIKDIDDQIQQLL 755
Score = 46 (21.3 bits), Expect = 1.1e-24, Sum P(3) = 1.1e-24
Identities = 14/50 (28%), Positives = 27/50 (54%)
Query: 650 IEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIE---KED 696
+E E A + + E + I+ + RE+E+ + + + LE+I+ KED
Sbjct: 873 LESEIAMVNHD-ESAVTILDQVTAELRELEHTVPQQSKDLETIKAKLKED 921
Score = 45 (20.9 bits), Expect = 4.3e-25, Sum P(3) = 4.3e-25
Identities = 9/40 (22%), Positives = 20/40 (50%)
Query: 837 NILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEK 876
N+ EY R+ ++ LS ++ + EL ++ D + +
Sbjct: 665 NLKNEYNDRKSTLDALSNQKSGYRHELSELASKNDDINRE 704
Score = 43 (20.2 bits), Expect = 3.7e-24, Sum P(3) = 3.7e-24
Identities = 17/71 (23%), Positives = 32/71 (45%)
Query: 646 EQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKL 705
E+ + ED + +R+EIIN + E++ N ++ SI+++ + T
Sbjct: 394 EKSVFED----IDIKRKEIINKEGEIRDLISEIDAKANAINHEMRSIQRQAESKTKSLTT 449
Query: 706 VDQAADLNIQQ 716
D+ LN Q
Sbjct: 450 TDKIGILNQDQ 460
Score = 42 (19.8 bits), Expect = 1.2e-33, Sum P(2) = 1.2e-33
Identities = 10/48 (20%), Positives = 26/48 (54%)
Query: 191 SKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMK 238
S+L + + R LN+++ ++ +E +R++ + L++ E+ K
Sbjct: 692 SELASKNDDINREAHQLNEIRKKYTMRKSTIETLREKLDQLKR-EARK 738
Score = 37 (18.1 bits), Expect = 9.5e-24, Sum P(3) = 9.5e-24
Identities = 33/131 (25%), Positives = 57/131 (43%)
Query: 464 NRAHANYLEDHVGHYIWKSFITQDAGDR---DFLAKNLKPFDVPILNYVSNESSRKEPFQ 520
N+ Y E+ G++ SF+ QD D+ + N V IL+ V+ E E
Sbjct: 849 NKVAEKYEEE--GNFNL-SFV-QDVLDKLESEIAMVNHDESAVTILDQVTAELRELE-HT 903
Query: 521 ISEEMRALG-ISARLDQVFDAPHAVKEVLISQFGLDSSYIGSKETDQKADNVAKLGILDF 579
+ ++ + L I A+L + D HAV E + S I ++ + +NV G +
Sbjct: 904 VPQQSKDLETIKAKLKE--D--HAVLEPKLDDI---VSKISARFA-RLFNNVGSAGAVRL 955
Query: 580 WTPENHYRWSI 590
P+++ W I
Sbjct: 956 EKPKDYAEWKI 966
>UNIPROTKB|J9P883 [details] [associations]
symbol:SMC5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030915 "Smc5-Smc6 complex" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA] InterPro:IPR027131 InterPro:IPR003395
Pfam:PF02463 CTD:23137 PANTHER:PTHR19306:SF1 OMA:GMDPRNE
GeneTree:ENSGT00550000074963 EMBL:AAEX03000569 RefSeq:XP_533529.3
Ensembl:ENSCAFT00000042950 GeneID:476327 KEGG:cfa:476327
Uniprot:J9P883
Length = 1106
Score = 669 (240.6 bits), Expect = 4.3e-63, P = 4.3e-63
Identities = 220/914 (24%), Positives = 424/914 (46%)
Query: 18 YMPGNIIEIELHNFMTFDHLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRA 77
++ G+I+ I + NF+T+D PG LN++IG NG+GKSS+VCAI L L G +GRA
Sbjct: 52 FVEGSIVRIVMENFLTYDICEVSPGPHLNMIIGANGTGKSSIVCAICLGLAGKPAFMGRA 111
Query: 78 TSIGAYVKRGEESGYIKISLRGDTKEEHLTIMRKIDT-RNKSEWFFNGKVVPKGEVLEIT 136
+G +VKRG G ++I L + +L I R+ID +N+S WF N K + V E
Sbjct: 112 DKVGFFVKRGCSKGMVEIELFRTSG--NLIITREIDVAKNQSSWFINKKSTTQKVVEEQV 169
Query: 137 KRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTI 196
NIQV NL QFLPQD+V EFAKLS ++LLE TEK++G P++ HC L K K +
Sbjct: 170 AALNIQVGNLCQFLPQDKVGEFAKLSKIELLEATEKSIGPPEMHRYHCELKNFREKEKQL 229
Query: 197 ECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAEYIXX 256
E + K + L ++ N ++DVER +R L+ +E ++ K PW++Y+ + EY
Sbjct: 230 ETSCKEKTEYLEKMIQRNERYKQDVERFYERKRHLDLIEMLEAKRPWVEYENVRQEYEEV 289
Query: 257 XXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENS---KRRMDFL 313
++ IE ++++ L+ K+ ++ I E S K++ D +
Sbjct: 290 KLARDRVKEEVRKLKEGQIPMTRRIEEIERQRHTLEARIKEKATDIKETSQKCKQKQDII 349
Query: 314 EKVDQGVQVQGKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPAYEPPHDKIEKL 373
E+ D+ Q++ + I R +T E +I+ +
Sbjct: 350 ERKDK--QIEELQQALTVKQNEEHDRQRRISNTRKMIEDLQNELKTTENCENLQPQIDAI 407
Query: 374 GSQILELGVQANQKRL-------QKSEKEKILNQNKLTLRQCSDRLKD-MEDKNNKLLHA 425
+ + VQ ++K L ++ EKE + + K ++ R + M K +KL
Sbjct: 408 TNDLRR--VQ-DEKALCEGEVIDKRGEKESLEKERK-SVGDNIVRFDNLMNQKEDKLRQR 463
Query: 426 LRNSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLEDHVGHYIWKSFIT 485
R++ ++A WL+ +R + + P++L +N+ + +A Y+E+H+ ++F+
Sbjct: 464 YRDT-----YDAVLWLRNNRDKFKQRVCEPIMLTINMKDNKNAKYIENHISSNDLRAFVF 518
Query: 486 QDAGDRDFLAKNLKPFDVPILNYV-SNESSR--KEPFQISEEMRALGISARLDQVFDAPH 542
+ D + K ++ +N V + +SS K P + E++ G + L ++FDAP
Sbjct: 519 ESQEDMEIFLKEIRDNKKLRVNAVIAPKSSYADKAPSRSLNELKPYGFFSYLRELFDAPD 578
Query: 543 AVKEVLISQFGLDSSYIGSKETDQKADNVAK-LGILDFWTPENHYRWSISRYGGHVSASV 601
V L + + +G++ T ++ + V + + +T E Y S Y V +S
Sbjct: 579 PVMSFLCCHYHIHEVPVGTERTRERIERVIQETRLKQMYTAEEKYVVKTSFYSNKVISSN 638
Query: 602 EPVNQSRLLLCSVDGNXXXXXXXXXXXXXXXXXXXXXXXXXMQTEQRLIEDEAAKLQKER 661
+ ++ L +VD + + +E + +L++++
Sbjct: 639 TSLKVAQFLTVTVDLEQRRHLEEQLKEINRKLQAVEAGLIALCERNKHLEHKDNELRQKK 698
Query: 662 EEIINIVQIEKRKRREMENHINLRKRKLESIEKED-DINTALAKLVDQAADLNIQQFKYA 720
+E++ K K+R++E I+ + L+ +E++ ++ K + ++N+Q+ K
Sbjct: 699 KELLE----RKTKKRQLEQKISSKLGSLKLMEQDTCNLEEEERKASTKIKEINVQKAKLV 754
Query: 721 IEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHY-EDCKKEV 779
E+ N V+I C + +K ++ I E N + + +A + L E E+
Sbjct: 755 TELTNF-VKI--CTSLHIQKVDLILQNTTVISEK--NKLESDYMAASSQLRITEQHFIEL 809
Query: 780 EHCRKHL----SDAKRQAESIAFITPE--LEKEF-LEMPTTIEELEA----AIQD---NI 825
+ R+ L + ++A + + E + +E+ ++PT + A QD +
Sbjct: 810 DESRQRLLQKCKELMKRARQVCNLGAEQTVPQEYQTQVPTIPNGHNSSPPMAFQDLPNTL 869
Query: 826 SQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLV 885
+ +++ ++ + + + TK+E +E+++ E+ +K+ L R +
Sbjct: 870 DEIDALLTEERSRASCFTGLNPTVVEEYTKRE---EEIEQLTEELK-IKKVELDKYRENI 925
Query: 886 AQINETFSRNFQEM 899
+Q+ E + +E+
Sbjct: 926 SQVKERWLNPLKEL 939
Score = 604 (217.7 bits), Expect = 1.0e-55, P = 1.0e-55
Identities = 152/395 (38%), Positives = 227/395 (57%)
Query: 644 QTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALA 703
Q EQ+ I + L+ ++ N+ + E+RK IN++K KL + E + + +
Sbjct: 710 QLEQK-ISSKLGSLKLMEQDTCNLEE-EERKASTKIKEINVQKAKLVT-ELTNFVKICTS 766
Query: 704 KLVDQAADLNIQQFKYAIEIKNLLVE---IVSCKWSYAEKHMASIEFDAKIRELEFNLKQ 760
+ Q DL +Q E KN L S + E+H IE D + L K+
Sbjct: 767 LHI-QKVDLILQNTTVISE-KNKLESDYMAASSQLRITEQHF--IELDESRQRLLQKCKE 822
Query: 761 HEKLALQA-SLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEA 819
K A Q +L E + E+ + + S +P + F ++P T++E++A
Sbjct: 823 LMKRARQVCNLGAEQTVPQ-EY-QTQVPTIPNGHNS----SPPMA--FQDLPNTLDEIDA 874
Query: 820 AIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLP 879
+ + S+A+ LN +++EY R+ +IE L+ + + K EL ++ I +KE+WL
Sbjct: 875 LLTEERSRASCFTGLNPTVVEEYTKREEEIEQLTEELKIKKVELDKYRENISQVKERWLN 934
Query: 880 TLRNLVAQINETFSRNFQEMAVAGEVSLD-EHESDFDKFGILIKVKFRQSGQLEVLSAHH 938
L+ LV +INE FS F M AGEV L E+E D+DK+GI I+VKFR S QL L+ HH
Sbjct: 935 PLKELVEKINEKFSNFFSSMQCAGEVDLHTENEEDYDKYGIRIRVKFRSSTQLHELTPHH 994
Query: 939 QSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTPQCF 998
QSGGERSVST+LYL++LQ+L CPFRVVDEINQGMDPINER++F+ +V A + NT Q F
Sbjct: 995 QSGGERSVSTMLYLMALQELNRCPFRVVDEINQGMDPINERRVFEMVVNTACKENTSQYF 1054
Query: 999 LLTPKLLPDLEYSEACSILNIMNGPWIEQPSKVWS 1033
+TPKLL +L YSE ++L + NGP + +P++ W+
Sbjct: 1055 FITPKLLQNLPYSEKMTVLFVYNGPHMLEPNR-WN 1088
>ASPGD|ASPL0000076401 [details] [associations]
symbol:AN8742 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030915 "Smc5-Smc6
complex" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0044732 "mitotic spindle pole body" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0032153 "cell division site"
evidence=IEA] [GO:0003697 "single-stranded DNA binding"
evidence=IEA] [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0071139 "resolution
of recombination intermediates" evidence=IEA] [GO:0000725
"recombinational repair" evidence=IEA] InterPro:IPR027131
InterPro:IPR003395 Pfam:PF02463 EMBL:BN001303 PANTHER:PTHR19306:SF1
OMA:GMDPRNE EnsemblFungi:CADANIAT00006326 Uniprot:C8VA01
Length = 1185
Score = 614 (221.2 bits), Expect = 1.0e-56, P = 1.0e-56
Identities = 225/933 (24%), Positives = 400/933 (42%)
Query: 13 RGEDDYMPGNIIEIELHNFMTFDHLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQ 72
RG++ + PG I+ I++ +F+T+ PG +LN+VIGPNG+GKS+LVCAI L LG
Sbjct: 109 RGQEGFKPGAIVRIKVKDFVTYTAAEFFPGPKLNMVIGPNGTGKSTLVCAICLGLGWGPV 168
Query: 73 LLGRATSIGAYVKRGEESGYIKISLRGDTKEEHLTIMRKIDTR--NKSEWFFNGKVVPKG 130
LGRA IG +VK G I+I L K ++ +I R NKS + NGK
Sbjct: 169 HLGRAKDIGEFVKHGCREATIEIELARGPKHSRNPVVTRIIKREGNKSSFMLNGK----- 223
Query: 131 EVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKS 190
+ F IQV+NL QFLPQD+V EFA L+PV+LL T++A ++ H L
Sbjct: 224 ------QSFAIQVDNLCQFLPQDKVSEFAALTPVELLHSTQRAAAGAEMVELHENLKRLR 277
Query: 191 SKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKK 250
++ K ++ + + D L L+ Q D ERVRQRA++ ++E ++ P + Y
Sbjct: 278 AEQKKLQSNNQSDKDLLANLENRQEMQRADFERVRQRAQIARRIELLQTVRPLVLY---- 333
Query: 251 AEYIXXXXXXXXXXXXXXXXXNTLHEFSKPI----EGKKQEKAILDGDCKKLSSLINENS 306
+ L KP+ E KK+ L+ K +
Sbjct: 334 RHLVEQGKALKEERNVSQRELEVLEAQLKPVMRSSEQKKEYCMQLEAVVKHKQRALERAD 393
Query: 307 KRRMDFLEKVDQGVQVQGKYKXXXXXXXXXXXXXXXI-LKARXXXXXXXXXXQTVPA-YE 364
+ D KV+Q Q + K Q P ++
Sbjct: 394 RMATDLNRKVEQYEQNMKELDAEIEAEKKSAVKSRQEGAKIAQTIKTLTRQLQDNPVEFD 453
Query: 365 PP--HDKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKL 422
+++I +I E+ +A + +K + + N+ L+Q +L+ ++ + +
Sbjct: 454 ADWYNEQIRDKRREIREIENRAKEINERKRQLHEKFNETGDRLKQAEHQLRSLDSRAGQQ 513
Query: 423 LHALRNSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLEDHVGHYIWKS 482
L++ +++ ++AY WL ++ + +E +GP ++ ++ + +A+ +E + + S
Sbjct: 514 EKKLQDVSSDS-YKAYRWLLNNQDKFEQEVFGPPIVTCSIKDSKYADQVESLLQKTDFTS 572
Query: 483 FITQDAGD----RDFLAKNLKPFDVPILNYVSNESSRKEPFQISEEMRALGISARLDQVF 538
F Q+ D + +L L+ D+ I + + + E+R LG
Sbjct: 573 FTVQNRRDFRTLQRYLINELRLHDISIRTSSTPLENLRSSLP-DHELRDLGFHGWARDFL 631
Query: 539 DAPHAVKEVLISQFGLDSSYIGSKETDQKADNVAKLGILDFWTPENHYRWSISR---YG- 594
D P V +L+S+ L + + ++ + + G + W ++I+R YG
Sbjct: 632 DGPEPVVAMLVSEKLLHQTPVSLRDISDQTFATLEQGSISSWVAGKQ-NYTINRRREYGP 690
Query: 595 GHVSASVEPVNQSRLLLCS-VDGNXXXXXXXXXXXXXXXXXXXXXXXXXMQTEQRLIEDE 653
G +S V V +R+ VD + + ++ +
Sbjct: 691 GAISTRVRQVRPARVWTSQPVDASAKAELQRRIQELRSEVEEIKERIESDRATMAQLKRD 750
Query: 654 AAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIE-KEDDINTALAKLVDQAADL 712
ER+++ + +K ++ H K+ E K++ + ++AK+ +
Sbjct: 751 NDTAHAERDKL----ERDKNDKQTAYTHFRAIPEKIRHQEAKKEAQDASIAKIRASIIKI 806
Query: 713 NIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDA------------KIRELEFNLKQ 760
+Q K ++E +++ + S E H I+ K+R E+ +
Sbjct: 807 RHKQDKLSVEKAEAVLQYANAVESLRELHEELIKLSLWKIESFSDWEVLKLRNSEYEERL 866
Query: 761 HEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPT---TIEEL 817
+ K L E K++ CR+ +AK+ + A P+L + E+ + T E L
Sbjct: 867 NAKRDEVKQLS-EQVKQKALECRRAEQEAKKLSVK-AREQPDLMEVAQEVSSNNLTPEAL 924
Query: 818 EAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTK-QEADKKELKRFLAEIDALKEK 876
E I ++ N++QEYE R RQI L K E D+K LK+F I ++ K
Sbjct: 925 EGEIDSEQARLELTHGGPSNVVQEYEERARQINKLRKKLTEFDEK-LKQFNDAIAEVRGK 983
Query: 877 WLPTLRNLVAQINETFSRNFQEMAVAGEVSLDE 909
W P L +V +++ FS +F + AG+VSLD+
Sbjct: 984 WEPKLDAIVKSVSDAFSDSFARIGCAGQVSLDK 1016
Score = 425 (154.7 bits), Expect = 5.0e-36, P = 5.0e-36
Identities = 126/371 (33%), Positives = 194/371 (52%)
Query: 671 EKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAADLNIQQFKYAIE--IKNLLV 728
E +K + + +R ++ K+D ++ A+ V Q A+ ++ + E IK L
Sbjct: 786 EAKKEAQDASIAKIRASIIKIRHKQDKLSVEKAEAVLQYANA-VESLRELHEELIKLSLW 844
Query: 729 EIVSCK-WSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLS 787
+I S W + + + E++ ++ +KQ + Q +L +C++ + +K LS
Sbjct: 845 KIESFSDWEVLK--LRNSEYEERLNAKRDEVKQLSEQVKQKAL---ECRRAEQEAKK-LS 898
Query: 788 DAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQR 847
R+ + + E+ L T E LE I ++ N++QEYE R R
Sbjct: 899 VKAREQPDLMEVAQEVSSNNL----TPEALEGEIDSEQARLELTHGGPSNVVQEYEERAR 954
Query: 848 QIEDLSTK-QEADKKELKRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVS 906
QI L K E D+K LK+F I ++ KW P L +V +++ FS +F + AG+VS
Sbjct: 955 QINKLRKKLTEFDEK-LKQFNDAIAEVRGKWEPKLDAIVKSVSDAFSDSFARIGCAGQVS 1013
Query: 907 LDE--HE---------SDFDKFGILIKVKFRQSGQLEVLSAHHQSGGERSVSTILYLVSL 955
LD+ E +DFD + I + VKFR+ L +L +H QSGGER+VSTI YL++L
Sbjct: 1014 LDKPGDEPGPDGQPSGNDFDLWSIQVHVKFREHENLSLLDSHRQSGGERAVSTIFYLMAL 1073
Query: 956 QDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTP----QCFLLTPKLLPDLEYS 1011
Q L+ PFRVVDEINQGMDP NER + +LV A P++ Q FL+TPKLL L Y
Sbjct: 1074 QSLSASPFRVVDEINQGMDPRNERMVHGRLVEIACAPSSDGGGGQYFLITPKLLSGLVYK 1133
Query: 1012 EACSILNIMNG 1022
+L I++G
Sbjct: 1134 PGMRVLCIVSG 1144
>UNIPROTKB|F1P1S3 [details] [associations]
symbol:SMC5 "Structural maintenance of chromosomes protein
5" species:9031 "Gallus gallus" [GO:0000724 "double-strand break
repair via homologous recombination" evidence=IEA] [GO:0030915
"Smc5-Smc6 complex" evidence=IEA] InterPro:IPR027131
InterPro:IPR003395 Pfam:PF02463 PANTHER:PTHR19306:SF1
GeneTree:ENSGT00550000074963 EMBL:AADN02068109 EMBL:AADN02068110
EMBL:AADN02078239 EMBL:AADN02078240 EMBL:AADN02078241
EMBL:AADN02078242 EMBL:AADN02078243 EMBL:AADN02078244
EMBL:AADN02078245 EMBL:AADN02078246 EMBL:AADN02078247
EMBL:AADN02078248 IPI:IPI00822772 Ensembl:ENSGALT00000038209
ArrayExpress:F1P1S3 Uniprot:F1P1S3
Length = 1057
Score = 604 (217.7 bits), Expect = 8.5e-56, P = 8.5e-56
Identities = 231/922 (25%), Positives = 413/922 (44%)
Query: 18 YMPGNIIEIELHNFMTFDHLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRA 77
++ G+I+ I + NF+T+D +PG LN++IG NG+GKSS+VCAI L L G LGRA
Sbjct: 1 FVEGSIVRIYMENFLTYDICEVRPGPNLNMIIGANGTGKSSIVCAICLGLAGKPSFLGRA 60
Query: 78 TSIGAYVKRGEESGYIKISLRGDTKEEHLTIMRKIDT-RNKSEWFFNGKVVPKGEVLEIT 136
+G +VK+G G ++I L E++ I R+I N S W N K+ V E
Sbjct: 61 EKVGLFVKQGCLKGLVEIELF--KVPENIIITREIQVVTNTSTWHINRKLTTLKTVEEQV 118
Query: 137 KRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTI 196
NIQV+NL QFLPQD+V EFA++S ++LLE TEK++G P++ HC L K + +
Sbjct: 119 AALNIQVDNLCQFLPQDKVGEFARMSKIELLEATEKSIGPPEMYQFHCKLKSLKEKEREL 178
Query: 197 ECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAEYIXX 256
E K ++L ++K ++DV+R + L+ ++ +++K PW++Y+ + ++
Sbjct: 179 ENVCKDKVNSLEKMKQRAERYKQDVDRYHECKRHLDLIDMLQRKRPWVEYETVRQQH--- 235
Query: 257 XXXXXXXXXXXXXXXNTLHEFSKPIEGKKQE-KAILDGDCKKLSSL------INENSKRR 309
L E P+ K +E + + K+ + +++ K +
Sbjct: 236 -EDVKQRRDQAKEELKNLKEMQSPLTKKIRECEEFYNSLNMKIKNTADEIKGVSQKCKEK 294
Query: 310 MDFLEKVDQGVQVQGKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPAYEPPHDK 369
D LE D+ Q+ + IL A TV E +
Sbjct: 295 QDALEMKDK--QISEINQALRMKKDEEVDRKKKILSAYKMIDEWNNELNTVTDCENLQPQ 352
Query: 370 IEKLGSQILELGVQ-AN-QKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNN--KLLHA 425
I+ + +++ + + AN + EKI NQ + R DR+ + NN K+
Sbjct: 353 IDAVNNELKHVQEERANIDSDIGDVTTEKI-NQERENGR-IIDRIGQL---NNIIKVKEE 407
Query: 426 LRNSGAENIFEAYCWLQQHRHELNKEAYGPVLLEV---NVSNRAHANYLEDHVGHYIWKS 482
+ + A WL++++H+ KE P++L NV + HA Y+E+H+ K+
Sbjct: 408 TLQARFRDTHSALMWLRKNKHKFKKEVCEPMMLTTSRSNVKDNKHAKYVENHISTNDMKA 467
Query: 483 FITQDAGDRDFLAKNLKPFDVPILNYV-SNESSRKE--PFQISEEMRALGISARLDQVFD 539
F+ + D + L+ +N V + + S E P EE+ G + L ++FD
Sbjct: 468 FVFESQEDMELFLVELRDRQKLRVNAVCAPDKSCAETLPSTPIEELHRYGFFSYLRELFD 527
Query: 540 APHAVKEVLISQFGLDSSYIGSKETDQKADNVAK-LGILDFWTPENHYRWSISRYGGHVS 598
AP V L SQ+ + +G+++T + V K + +T E Y +S Y +S
Sbjct: 528 APLPVMSYLCSQYHVHEVPVGTEKTRNMIERVIKETKLKQIYTAEEKYTIKVSTYT-KLS 586
Query: 599 ASVEP-VNQSRLLLCSVDGNXXXXXXXXXXXXXXXXXXXXXXXXXMQTEQRLIEDEAAKL 657
S + ++ L VD + + Q+ +E +L
Sbjct: 587 FSTNMCLRPAQFLNYYVDTDERRQLENQQQNIKHILQSLDKQLMTLCERQKHLECRDNEL 646
Query: 658 QKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAA----DLN 713
+++++E++ +R+++E+ I ++ + +E ++ IN L K QA +N
Sbjct: 647 RQQKKELLE----RGSRRKQLESKIAVKYDSIRQLE-QNPIN--LEKESQQAKVKIRAIN 699
Query: 714 IQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYE 773
IQ+ K E+ + VS A+ + S DA+ LE K + L+AS +
Sbjct: 700 IQKAKLVTELMCHIKNYVSLNICKADLILQSTAVDAEKNRLEAEYKA-ASVELRASEESD 758
Query: 774 -DC----KKEVEHCRKHLSDAKRQAESIAFIT-PELEKEFL----EMPTTIEELEA--AI 821
C + ++ CR LS Q S++ P E++ L +P++ A +
Sbjct: 759 FQCLNSKSRFMQLCRA-LSGENTQLCSLSVDPLPCYEEDLLPWDPRVPSSNSPYNAFQTL 817
Query: 822 QDNISQANSIFFLNQNILQEYEHRQRQIEDLSTK--QEADKK--ELKRFLAEIDALKEKW 877
D + + ++ FLN E R LS +E K+ E+++ + I+ K++
Sbjct: 818 PDTLEEIDA--FLN-----EERSRVSCFTGLSASVVEECSKQMEEIQKLMESIEENKKE- 869
Query: 878 LPTLRNLVAQINETFSRNFQEM 899
L + +++I E + ++M
Sbjct: 870 LDDYKQSISKIKERWLNPLKKM 891
Score = 540 (195.1 bits), Expect = 1.1e-48, P = 1.1e-48
Identities = 133/402 (33%), Positives = 222/402 (55%)
Query: 646 EQRLIEDEAAKLQKEREEIINIVQIEKRKRREME-NHINLRKRKLESIEKEDDINTALAK 704
E R + E + R+++ + + ++ R++E N INL K ++ K IN AK
Sbjct: 645 ELRQQKKELLERGSRRKQLESKIAVKYDSIRQLEQNPINLEKESQQAKVKIRAINIQKAK 704
Query: 705 LVDQAADLNIQQFKYAIEI--KNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHE 762
LV + +I+ + ++ I +L+++ + AEK+ E+ A EL + +
Sbjct: 705 LVTELM-CHIKNY-VSLNICKADLILQSTAVD---AEKNRLEAEYKAASVELRASEESDF 759
Query: 763 KLALQASLHYEDCK----KEVEHCRKHLSDAKRQAESIAFITPELEKE------FLEMPT 812
+ S + C+ + + C + E + P + F +P
Sbjct: 760 QCLNSKSRFMQLCRALSGENTQLCSLSVDPLPCYEEDLLPWDPRVPSSNSPYNAFQTLPD 819
Query: 813 TIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDA 872
T+EE++A + + S+ + L+ ++++E + +I+ L E +KKEL + I
Sbjct: 820 TLEEIDAFLNEERSRVSCFTGLSASVVEECSKQMEEIQKLMESIEENKKELDDYKQSISK 879
Query: 873 LKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLD-EHESDFDKFGILIKVKFRQSGQL 931
+KE+WL L+ ++ INE FS F M GEV L E+E ++DK+GI I+VKF L
Sbjct: 880 IKERWLNPLKKMIESINEKFSGFFSSMESVGEVDLHVENEEEYDKYGIRIRVKFHNFTDL 939
Query: 932 EVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQ 991
L+ +HQSGGE+SVST+LYL++LQ+L CPFRVVDEINQGMDP+NER++F+ V+ A +
Sbjct: 940 HELTPYHQSGGEKSVSTVLYLMALQELNRCPFRVVDEINQGMDPVNERRVFEMFVKTACK 999
Query: 992 PNTPQCFLLTPKLLPDLEYSEACSILNIMNGPWIEQPSKVWS 1033
+T Q FL+TPKLL +L Y+E ++L + NGP++ + +K W+
Sbjct: 1000 ESTSQYFLITPKLLQNLTYNEKMTLLFVYNGPFMLEANK-WN 1040
>UNIPROTKB|F1P1S2 [details] [associations]
symbol:SMC5 "Structural maintenance of chromosomes protein
5" species:9031 "Gallus gallus" [GO:0000724 "double-strand break
repair via homologous recombination" evidence=IEA] [GO:0030915
"Smc5-Smc6 complex" evidence=IEA] InterPro:IPR027131
InterPro:IPR003395 Pfam:PF02463 PANTHER:PTHR19306:SF1
GeneTree:ENSGT00550000074963 EMBL:AADN02068109 EMBL:AADN02068110
EMBL:AADN02078239 EMBL:AADN02078240 EMBL:AADN02078241
EMBL:AADN02078242 EMBL:AADN02078243 EMBL:AADN02078244
EMBL:AADN02078245 EMBL:AADN02078246 EMBL:AADN02078247
EMBL:AADN02078248 IPI:IPI00818651 Ensembl:ENSGALT00000038210
ArrayExpress:F1P1S2 Uniprot:F1P1S2
Length = 1060
Score = 604 (217.7 bits), Expect = 8.7e-56, P = 8.7e-56
Identities = 215/819 (26%), Positives = 366/819 (44%)
Query: 21 GNIIEIELHNFMTFDHLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI 80
G+I+ I + NF+T+D +PG LN++IG NG+GKSS+VCAI L L G LGRA +
Sbjct: 3 GSIVRIYMENFLTYDICEVRPGPNLNMIIGANGTGKSSIVCAICLGLAGKPSFLGRAEKV 62
Query: 81 GAYVKRGEESGYIKISLRGDTKEEHLTIMRKIDT-RNKSEWFFNGKVVPKGEVLEITKRF 139
G +VK+G G ++I L E++ I R+I N S W N K+ V E
Sbjct: 63 GLFVKQGCLKGLVEIELF--KVPENIIITREIQVVTNTSTWHINRKLTTLKTVEEQVAAL 120
Query: 140 NIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECT 199
NIQV+NL QFLPQD+V EFA++S ++LLE TEK++G P++ HC L K + +E
Sbjct: 121 NIQVDNLCQFLPQDKVGEFARMSKIELLEATEKSIGPPEMYQFHCKLKSLKEKERELENV 180
Query: 200 VKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAEYIXXXXX 259
K ++L ++K ++DV+R + L+ ++ +++K PW++Y+ + ++
Sbjct: 181 CKDKVNSLEKMKQRAERYKQDVDRYHECKRHLDLIDMLQRKRPWVEYETVRQQH----ED 236
Query: 260 XXXXXXXXXXXXNTLHEFSKPIEGKKQE-KAILDGDCKKLSSL------INENSKRRMDF 312
L E P+ K +E + + K+ + +++ K + D
Sbjct: 237 VKQRRDQAKEELKNLKEMQSPLTKKIRECEEFYNSLNMKIKNTADEIKGVSQKCKEKQDA 296
Query: 313 LEKVDQGVQVQGKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPAYEPPHDKIEK 372
LE D+ Q+ + IL A TV E +I+
Sbjct: 297 LEMKDK--QISEINQALRMKKDEEVDRKKKILSAYKMIDEWNNELNTVTDCENLQPQIDA 354
Query: 373 LGSQILELGVQ-AN-QKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNN--KLLHALRN 428
+ +++ + + AN + EKI NQ + R DR+ + NN K+
Sbjct: 355 VNNELKHVQEERANIDSDIGDVTTEKI-NQERENGR-IIDRIGQL---NNIIKVKEETLQ 409
Query: 429 SGAENIFEAYCWLQQHRHELNKEAYGPVLLEV---NVSNRAHANYLEDHVGHYIWKSFIT 485
+ + A WL++++H+ KE P++L NV + HA Y+E+H+ K+F+
Sbjct: 410 ARFRDTHSALMWLRKNKHKFKKEVCEPMMLTTSRSNVKDNKHAKYVENHISTNDMKAFVF 469
Query: 486 QDAGDRDFLAKNLKPFDVPILNYV-SNESSRKE--PFQISEEMRALGISARLDQVFDAPH 542
+ D + L+ +N V + + S E P EE+ G + L ++FDAP
Sbjct: 470 ESQEDMELFLVELRDRQKLRVNAVCAPDKSCAETLPSTPIEELHRYGFFSYLRELFDAPL 529
Query: 543 AVKEVLISQFGLDSSYIGSKETDQKADNVAK-LGILDFWTPENHYRWSISRYGGHVSASV 601
V L SQ+ + +G+++T + V K + +T E Y +S Y +S S
Sbjct: 530 PVMSYLCSQYHVHEVPVGTEKTRNMIERVIKETKLKQIYTAEEKYTIKVSTYT-KLSFST 588
Query: 602 EP-VNQSRLLLCSVDGNXXXXXXXXXXXXXXXXXXXXXXXXXMQTEQRLIEDEAAKLQKE 660
+ ++ L VD + + Q+ +E +L+++
Sbjct: 589 NMCLRPAQFLNYYVDTDERRQLENQQQNIKHILQSLDKQLMTLCERQKHLECRDNELRQQ 648
Query: 661 REEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAA----DLNIQQ 716
++E++ +R+++E+ I ++ + +E ++ IN L K QA +NIQ+
Sbjct: 649 KKELLE----RGSRRKQLESKIAVKYDSIRQLE-QNPIN--LEKESQQAKVKIRAINIQK 701
Query: 717 FKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQAS------L 770
K E+ + VS A+ + S DA+ LE K + L+AS L
Sbjct: 702 AKLVTELMCHIKNYVSLNICKADLILQSTAVDAEKNRLEAEYKA-ASVELRASENQLPIL 760
Query: 771 HYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLE 809
H C EH R + D ES +P L + F E
Sbjct: 761 HKTSCTIG-EHNRMQIEDI----ESSCNRSPALVQTFTE 794
Score = 537 (194.1 bits), Expect = 2.3e-48, P = 2.3e-48
Identities = 137/406 (33%), Positives = 225/406 (55%)
Query: 646 EQRLIEDEAAKLQKEREEIINIVQIEKRKRREME-NHINLRKRKLESIEKEDDINTALAK 704
E R + E + R+++ + + ++ R++E N INL K ++ K IN AK
Sbjct: 644 ELRQQKKELLERGSRRKQLESKIAVKYDSIRQLEQNPINLEKESQQAKVKIRAINIQKAK 703
Query: 705 LVDQAADLNIQQFKYAIEI--KNLLVEIVSCKWSYAEKHMASIEFDA---KIRELEFNLK 759
LV + +I+ + ++ I +L+++ + AEK+ E+ A ++R E L
Sbjct: 704 LVTELM-CHIKNY-VSLNICKADLILQSTAVD---AEKNRLEAEYKAASVELRASENQLP 758
Query: 760 QHEKLALQASLHYEDCKKEVEH-CRKHLSDAKRQAESIAFIT----PELEKE------FL 808
K + H +++E C + + + E A I P F
Sbjct: 759 ILHKTSCTIGEHNRMQIEDIESSCNRSPALVQTFTEGTAKICFRGIPGYRARIRPIMAFQ 818
Query: 809 EMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLA 868
+P T+EE++A + + S+ + L+ ++++E + +I+ L E +KKEL +
Sbjct: 819 TLPDTLEEIDAFLNEERSRVSCFTGLSASVVEECSKQMEEIQKLMESIEENKKELDDYKQ 878
Query: 869 EIDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLD-EHESDFDKFGILIKVKFRQ 927
I +KE+WL L+ ++ INE FS F M GEV L E+E ++DK+GI I+VKF
Sbjct: 879 SISKIKERWLNPLKKMIESINEKFSGFFSSMESVGEVDLHVENEEEYDKYGIRIRVKFHN 938
Query: 928 SGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVR 987
L L+ +HQSGGE+SVST+LYL++LQ+L CPFRVVDEINQGMDP+NER++F+ V+
Sbjct: 939 FTDLHELTPYHQSGGEKSVSTVLYLMALQELNRCPFRVVDEINQGMDPVNERRVFEMFVK 998
Query: 988 AASQPNTPQCFLLTPKLLPDLEYSEACSILNIMNGPWIEQPSKVWS 1033
A + +T Q FL+TPKLL +L Y+E ++L + NGP++ + +K W+
Sbjct: 999 TACKESTSQYFLITPKLLQNLTYNEKMTLLFVYNGPFMLEANK-WN 1043
>UNIPROTKB|F1SJC8 [details] [associations]
symbol:LOC100515003 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0030915 "Smc5-Smc6 complex" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA] InterPro:IPR027131
PANTHER:PTHR19306:SF1 GeneTree:ENSGT00550000074963 EMBL:CU074416
RefSeq:XP_003121995.3 Ensembl:ENSSSCT00000005790 GeneID:100515003
KEGG:ssc:100515003 Uniprot:F1SJC8
Length = 314
Score = 578 (208.5 bits), Expect = 2.5e-55, P = 2.5e-55
Identities = 112/228 (49%), Positives = 161/228 (70%)
Query: 807 FLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRF 866
F ++P T++E++A + + S+A+ LN ++QEY R+ +IE L+ + + K EL ++
Sbjct: 70 FQDLPNTLDEIDALLTEERSRASCFTGLNPTVVQEYTKREEEIEQLTEELKIKKVELDKY 129
Query: 867 LAEIDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLD-EHESDFDKFGILIKVKF 925
I +KE+WL L+ LV +INE FS F M GEV L E+E D+DK+GI I+VKF
Sbjct: 130 RENISQVKERWLNPLKELVEKINEKFSHFFSSMQCGGEVDLHTENEEDYDKYGIRIRVKF 189
Query: 926 RQSGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQL 985
R + QL+ L+ HHQSGGERSVST+LYL++LQ+L CPFRVVDEINQGMDPINER++F+ +
Sbjct: 190 RTNTQLQELTPHHQSGGERSVSTMLYLMALQELNRCPFRVVDEINQGMDPINERRVFELV 249
Query: 986 VRAASQPNTPQCFLLTPKLLPDLEYSEACSILNIMNGPWIEQPSKVWS 1033
V A + NT Q F +TPKLL +L YS+ +IL + NGP + +P++ W+
Sbjct: 250 VNTACKENTSQYFFITPKLLQNLPYSDKMTILFVYNGPHMLEPNR-WN 296
>UNIPROTKB|F1P1S7 [details] [associations]
symbol:SMC5 "Structural maintenance of chromosomes protein
5" species:9031 "Gallus gallus" [GO:0000724 "double-strand break
repair via homologous recombination" evidence=IEA] [GO:0030915
"Smc5-Smc6 complex" evidence=IEA] InterPro:IPR027131
InterPro:IPR003395 Pfam:PF02463 PANTHER:PTHR19306:SF1
GeneTree:ENSGT00550000074963 EMBL:AADN02068109 EMBL:AADN02068110
EMBL:AADN02078239 EMBL:AADN02078240 EMBL:AADN02078241
EMBL:AADN02078242 EMBL:AADN02078243 EMBL:AADN02078244
EMBL:AADN02078245 EMBL:AADN02078246 EMBL:AADN02078247
EMBL:AADN02078248 IPI:IPI00819545 Ensembl:ENSGALT00000038207
ArrayExpress:F1P1S7 Uniprot:F1P1S7
Length = 1056
Score = 598 (215.6 bits), Expect = 4.0e-55, P = 4.0e-55
Identities = 225/914 (24%), Positives = 401/914 (43%)
Query: 18 YMPGNIIEIELHNFMTFDHLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRA 77
++ G+I+ I + NF+T+D +PG LN++IG NG+GKSS+VCAI L L G LGRA
Sbjct: 1 FVEGSIVRIYMENFLTYDICEVRPGPNLNMIIGANGTGKSSIVCAICLGLAGKPSFLGRA 60
Query: 78 TSIGAYVKRGEESGYIKISLRGDTKEEHLTIMRKIDT-RNKSEWFFNGKVVPKGEVLEIT 136
+G +VK+G G ++I L E++ I R+I N S W N K+ V E
Sbjct: 61 EKVGLFVKQGCLKGLVEIELF--KVPENIIITREIQVVTNTSTWHINRKLTTLKTVEEQV 118
Query: 137 KRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTI 196
NIQV+NL QFLPQD+V EFA++S ++LLE TEK++G P++ HC L K + +
Sbjct: 119 AALNIQVDNLCQFLPQDKVGEFARMSKIELLEATEKSIGPPEMYQFHCKLKSLKEKEREL 178
Query: 197 ECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAEYIXX 256
E K ++L ++K ++DV+R + L+ ++ +++K PW++Y+ + ++
Sbjct: 179 ENVCKDKVNSLEKMKQRAERYKQDVDRYHECKRHLDLIDMLQRKRPWVEYETVRQQH--- 235
Query: 257 XXXXXXXXXXXXXXXNTLHEFSKPIEGKKQE-KAILDGDCKKLSSL------INENSKRR 309
L E P+ K +E + + K+ + +++ K +
Sbjct: 236 -EDVKQRRDQAKEELKNLKEMQSPLTKKIRECEEFYNSLNMKIKNTADEIKGVSQKCKEK 294
Query: 310 MDFLEKVDQGVQVQGKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPAYEPPHDK 369
D LE D+ Q+ + IL A TV E +
Sbjct: 295 QDALEMKDK--QISEINQALRMKKDEEVDRKKKILSAYKMIDEWNNELNTVTDCENLQPQ 352
Query: 370 IEKLGSQILELGVQ-AN-QKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNN--KLLHA 425
I+ + +++ + + AN + EKI NQ + R DR+ + NN K+
Sbjct: 353 IDAVNNELKHVQEERANIDSDIGDVTTEKI-NQERENGR-IIDRIGQL---NNIIKVKEE 407
Query: 426 LRNSGAENIFEAYCWLQQHRHELNKEAYGPVLLEV---NVSNRAHANYLEDHVGHYIWKS 482
+ + A WL++++H+ KE P++L NV + HA Y+E+H+ K+
Sbjct: 408 TLQARFRDTHSALMWLRKNKHKFKKEVCEPMMLTTSRSNVKDNKHAKYVENHISTNDMKA 467
Query: 483 FITQDAGDRDFLAKNLKPFDVPILNYV-SNESSRKE--PFQISEEMRALGISARLDQVFD 539
F+ + D + L+ +N V + + S E P EE+ G + L ++FD
Sbjct: 468 FVFESQEDMELFLVELRDRQKLRVNAVCAPDKSCAETLPSTPIEELHRYGFFSYLRELFD 527
Query: 540 APHAVKEVLISQFGLDSSYIGSKETDQKADNVAK-LGILDFWTPENHYRWSISRYGGHVS 598
AP V L SQ+ + +G+++T + V K + +T E Y +S Y +S
Sbjct: 528 APLPVMSYLCSQYHVHEVPVGTEKTRNMIERVIKETKLKQIYTAEEKYTIKVSTYT-KLS 586
Query: 599 ASVEP-VNQSRLLLCSVDGNXXXXXXXXXXXXXXXXXXXXXXXXXMQTEQRLIEDEAAKL 657
S + ++ L VD + + Q+ +E +L
Sbjct: 587 FSTNMCLRPAQFLNYYVDTDERRQLENQQQNIKHILQSLDKQLMTLCERQKHLECRDNEL 646
Query: 658 QKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAA----DLN 713
+++++E++ +R+++E+ I ++ + +E ++ IN L K QA +N
Sbjct: 647 RQQKKELLE----RGSRRKQLESKIAVKYDSIRQLE-QNPIN--LEKESQQAKVKIRAIN 699
Query: 714 IQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQAS--LH 771
IQ+ K E+ + VS A+ + S DA+ LE K + L+AS
Sbjct: 700 IQKAKLVTELMCHIKNYVSLNICKADLILQSTAVDAEKNRLEAEYKA-ASVELRASEVKF 758
Query: 772 YEDCKKEVEH--CRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQAN 829
D +++ C+ +A+ FI K + M T L + + +
Sbjct: 759 VMDKNRQLSLSVCQSSRCEARTVCRE-EFIFKLSVKLWSNMKTLKSGLSSYLPEAFQTLP 817
Query: 830 SIFFLNQNILQEYEHRQRQIEDLSTK--QEADKK--ELKRFLAEIDALKEKWLPTLRNLV 885
L E R LS +E K+ E+++ + I+ K++ L + +
Sbjct: 818 DTLEEIDAFLNEERSRVSCFTGLSASVVEECSKQMEEIQKLMESIEENKKE-LDDYKQSI 876
Query: 886 AQINETFSRNFQEM 899
++I E + ++M
Sbjct: 877 SKIKERWLNPLKKM 890
Score = 559 (201.8 bits), Expect = 8.6e-51, P = 8.6e-51
Identities = 142/404 (35%), Positives = 229/404 (56%)
Query: 646 EQRLIEDEAAKLQKEREEIINIVQIEKRKRREME-NHINLRKRKLESIEKEDDINTALAK 704
E R + E + R+++ + + ++ R++E N INL K ++ K IN AK
Sbjct: 645 ELRQQKKELLERGSRRKQLESKIAVKYDSIRQLEQNPINLEKESQQAKVKIRAINIQKAK 704
Query: 705 LVDQA-------ADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFN 757
LV + LNI K + +++ V+ + AE AS+E A E++F
Sbjct: 705 LVTELMCHIKNYVSLNI--CKADLILQSTAVDAEKNRLE-AEYKAASVELRAS--EVKFV 759
Query: 758 LKQHEKLALQA--SLHYED---CKKEV--EHCRKHLSDAKRQAESIAFITPELEKEFLEM 810
+ ++ +L+L S E C++E + K S+ K ++ PE F +
Sbjct: 760 MDKNRQLSLSVCQSSRCEARTVCREEFIFKLSVKLWSNMKTLKSGLSSYLPEA---FQTL 816
Query: 811 PTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEI 870
P T+EE++A + + S+ + L+ ++++E + +I+ L E +KKEL + I
Sbjct: 817 PDTLEEIDAFLNEERSRVSCFTGLSASVVEECSKQMEEIQKLMESIEENKKELDDYKQSI 876
Query: 871 DALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLD-EHESDFDKFGILIKVKFRQSG 929
+KE+WL L+ ++ INE FS F M GEV L E+E ++DK+GI I+VKF
Sbjct: 877 SKIKERWLNPLKKMIESINEKFSGFFSSMESVGEVDLHVENEEEYDKYGIRIRVKFHNFT 936
Query: 930 QLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAA 989
L L+ +HQSGGE+SVST+LYL++LQ+L CPFRVVDEINQGMDP+NER++F+ V+ A
Sbjct: 937 DLHELTPYHQSGGEKSVSTVLYLMALQELNRCPFRVVDEINQGMDPVNERRVFEMFVKTA 996
Query: 990 SQPNTPQCFLLTPKLLPDLEYSEACSILNIMNGPWIEQPSKVWS 1033
+ +T Q FL+TPKLL +L Y+E ++L + NGP++ + +K W+
Sbjct: 997 CKESTSQYFLITPKLLQNLTYNEKMTLLFVYNGPFMLEANK-WN 1039
>ZFIN|ZDB-GENE-040426-1624 [details] [associations]
symbol:pufa "PUF (Pumilio/FBF) domain-containing
A" species:7955 "Danio rerio" [GO:0006281 "DNA repair"
evidence=IEA] [GO:0000724 "double-strand break repair via
homologous recombination" evidence=IEA] [GO:0030915 "Smc5-Smc6
complex" evidence=IEA] [GO:0008354 "germ cell migration"
evidence=IMP] InterPro:IPR027131 ZFIN:ZDB-GENE-040426-1624
GO:GO:0008354 HOGENOM:HOG000154342 PANTHER:PTHR19306:SF1
EMBL:BC055623 IPI:IPI00483675 ProteinModelPortal:Q7SXF8
STRING:Q7SXF8 ArrayExpress:Q7SXF8 Uniprot:Q7SXF8
Length = 418
Score = 487 (176.5 bits), Expect = 6.2e-51, Sum P(2) = 6.2e-51
Identities = 99/239 (41%), Positives = 148/239 (61%)
Query: 15 EDDYMPGNIIEIELHNFMTFDHLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLL 74
E D+M G I+ I +HNF+T+DH PG +LN+++G NG+GKSS+VCAI L L G T +L
Sbjct: 34 EGDFMEGAIVRITMHNFLTYDHSEVFPGPKLNMIVGANGTGKSSIVCAICLGLAGKTSVL 93
Query: 75 GRATSIGAYVKRGEESGYIKISLRGDTKEEHLTIMRKIDTRN-KSEWFFNGKVVPKGEVL 133
GR +G YVKRG + G ++I L T+ +L + R+I N +S W N K + V
Sbjct: 94 GRGDKVGLYVKRGCQRGSVEIELYR-TRG-NLIVTREIQVENNQSTWMLNKKHASQKAVE 151
Query: 134 EITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKL 193
E + +IQV NL QFLPQ++V EFAK+S +LLE TEK+VG P++ HC L +K
Sbjct: 152 EAVRELHIQVGNLCQFLPQEKVGEFAKMSNSELLEATEKSVGPPEMYEFHCELKTFRTKE 211
Query: 194 KTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAE 252
+ +E K G+ L + + N + DVER + L++++ ++KK PW++Y+ + E
Sbjct: 212 RDLENVCKEKGNFLEKARQRNERNKLDVERYYMKKRHLDRIQMLEKKKPWVEYETARKE 270
Score = 78 (32.5 bits), Expect = 6.2e-51, Sum P(2) = 6.2e-51
Identities = 41/174 (23%), Positives = 87/174 (50%)
Query: 739 EKHMASIE-FDAKIRELEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIA 797
E++ +E + K R L+ ++ EK + + YE +KE+E +K + KR+ +
Sbjct: 233 ERNKLDVERYYMKKRHLD-RIQMLEKK--KPWVEYETARKELEGVKKERDEMKRK---LR 286
Query: 798 FITPELEKEFLEMPTTIE-ELEAAIQDNISQANSIFFLNQNILQEYEHRQ-RQIEDLSTK 855
F+ E ++ L ++E EL+ Q N I Q Q+++ + +++ DL +K
Sbjct: 287 FLK-EAQEPLLRKIRSVESELQPIEQQMKEMTNRIKEATQKCKQKHDQLELKKLSDLKSK 345
Query: 856 QEADKKELKRFLA-EIDALKEKWLPTLRNLVAQINETFSR----NFQEMAVAGE 904
K++L++ ++ + D+L++ + NLVA E ++ N +++ + GE
Sbjct: 346 ----KRQLEQKISTKQDSLRQMEQNEI-NLVAIEEEANAKIAAVNNKKVTIMGE 394
Score = 52 (23.4 bits), Expect = 3.4e-48, Sum P(2) = 3.4e-48
Identities = 12/49 (24%), Positives = 30/49 (61%)
Query: 653 EAAKLQKEREEIINIVQIE--KRKRREMENHINLRKRKLESIEKEDDIN 699
EA + K++ + + + ++ K K+R++E I+ ++ L +E +++IN
Sbjct: 322 EATQKCKQKHDQLELKKLSDLKSKKRQLEQKISTKQDSLRQME-QNEIN 369
Score = 48 (22.0 bits), Expect = 8.8e-48, Sum P(2) = 8.8e-48
Identities = 13/56 (23%), Positives = 32/56 (57%)
Query: 648 RLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRK-LESIEK--EDDINT 700
R +E E ++++ +E+ N ++ +K ++ + + L+K L+S ++ E I+T
Sbjct: 300 RSVESELQPIEQQMKEMTNRIKEATQKCKQKHDQLELKKLSDLKSKKRQLEQKIST 355
Score = 43 (20.2 bits), Expect = 3.0e-47, Sum P(2) = 3.0e-47
Identities = 15/65 (23%), Positives = 33/65 (50%)
Query: 643 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTAL 702
M+ + R +++ L ++ + + +Q +++ +EM N I +K + +K D + L
Sbjct: 281 MKRKLRFLKEAQEPLLRKIRSVESELQPIEQQMKEMTNRIKEATQKCK--QKHDQLE--L 336
Query: 703 AKLVD 707
KL D
Sbjct: 337 KKLSD 341
>CGD|CAL0001481 [details] [associations]
symbol:SMC5 species:5476 "Candida albicans" [GO:0030915
"Smc5-Smc6 complex" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005816
"spindle pole body" evidence=IEA] [GO:0032153 "cell division site"
evidence=IEA] [GO:0071139 "resolution of recombination
intermediates" evidence=IEA] [GO:0000725 "recombinational repair"
evidence=IEA] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0009267 "cellular response to starvation" evidence=IMP]
[GO:0036170 "filamentous growth of a population of unicellular
organisms in response to starvation" evidence=IMP] [GO:0036180
"filamentous growth of a population of unicellular organisms in
response to biotic stimulus" evidence=IMP] [GO:0071216 "cellular
response to biotic stimulus" evidence=IMP] [GO:0003697
"single-stranded DNA binding" evidence=IEA] [GO:0003684 "damaged
DNA binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR027131 InterPro:IPR003395 CGD:CAL0001481 Pfam:PF02463
GO:GO:0005524 GO:GO:0007059 GO:GO:0071216 GO:GO:0036180
GO:GO:0003677 GO:GO:0009267 GO:GO:0030261 GO:GO:0036170
EMBL:AACQ01000131 EMBL:AACQ01000130 GO:GO:0009295 eggNOG:COG1196
PANTHER:PTHR19306:SF1 RefSeq:XP_713250.1 RefSeq:XP_713303.1
ProteinModelPortal:Q59UE8 STRING:Q59UE8 GeneID:3645087
GeneID:3645103 KEGG:cal:CaO19.2417 KEGG:cal:CaO19.9955
HOGENOM:HOG000247851 Uniprot:Q59UE8
Length = 1073
Score = 410 (149.4 bits), Expect = 1.7e-34, P = 1.7e-34
Identities = 213/930 (22%), Positives = 379/930 (40%)
Query: 7 KRLKVSRGEDDYMPGNIIEIELHNFMTFDHLICKPGSRLNLVIGPNGSGKSSLVCAIALA 66
KR KV + PG I ++ + NF T+ + LN++IGPNGSGKS+LV +I +
Sbjct: 11 KRRKVLE-PSKFRPGFIRKVRVWNFTTYSYTEFNLSPTLNMIIGPNGSGKSTLVASICIG 69
Query: 67 LGGDTQLLGRATSIGAYVKRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKV 126
L G L+ R ++ + +K G+E ++I++ + I R+ T +S W N K
Sbjct: 70 LAGSINLIKRK-NLKSMIKTGQEKSSVEITIENYEGHSPIVIKREF-TAKESNWTVNNKR 127
Query: 127 VPKGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCAL 186
+ ++ +I +FNIQ++NL FLPQ+RV EFA LSP KLL ETE+ +GD L + H L
Sbjct: 128 ATESKIKDIRTKFNIQLDNLCHFLPQERVAEFAGLSPEKLLMETERTLGDGHLLIMHEDL 187
Query: 187 VEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKY 246
+ K ++ + + +K L +L + E++ ++ + E+V++ + +P+ KY
Sbjct: 188 IAKDNESQQLGNKIKDIEGRLAKLHEDRSKLEEEARKLEEYDRKSEEVDNHRLLIPYAKY 247
Query: 247 -DMKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGK--KQEKAILDGDCK------K 297
D+K T KP+E EK+I + K
Sbjct: 248 QDLKNQR-----THLKRLRDEAKHKLRTFQANFKPLENDIANAEKSINEESEKYSHLKDS 302
Query: 298 LSSLINENSKRRMDFLEKVDQGVQVQGKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXX 357
L S +NE ++ + + + +++ K I K
Sbjct: 303 LKSTLNEINQHKSTQKQVTTEISELRANLKSYQTRAEQKKKELEEIKKEIAELQEKQRGL 362
Query: 358 QTVPAYEPPHDKIEKLGS--QILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDM 415
V E + E ++ +L Q + Q+S+ + L LR RL
Sbjct: 363 PQVDPEEMQNLSTESTSKRHELRDLEEQFQEVNSQRSDIGRELTHLTEQLRGAEKRLST- 421
Query: 416 EDKNNKLLHALRNSGAENIF--EAYCWLQQHRHELNKEA-Y--GPVLLEVNVSNRAHANY 470
+DK + L+ R +G EA+ ++ R+E E Y PV+ NV + +A
Sbjct: 422 KDKLDMLVSDARQNGRSYRLRDEAFDVHKRLRNEPEYEGRYFEAPVI-SCNVPDINYAAA 480
Query: 471 LEDHVGHYIWKSFITQDAGDRDFLAKNLKPFDVPI-LNYVSNESSRKEPFQISEEMRALG 529
E + + +F + D DFL+K + + L V++ + + ++R G
Sbjct: 481 AEKIIDNNTLFAFTVTNQSDFDFLSKFSQQTNTNTPLRMVNSVVNPTHEYS-KHQLREFG 539
Query: 530 ISARLDQVFDAPHAVKEVLISQFGLDSSYIG----SKETDQKADNVA---KLGILDFWTP 582
L P V +L S + + + S E ++ NV+ +L F
Sbjct: 540 FEGYLSDYIVGPKEVLSMLYSTSKIHTIPVSKHQLSSEQVRRLTNVSGNDRLPFTKFVAG 599
Query: 583 ENHYRWSISRYGGHVSASVEPVNQSRLLLCSVDGNXXXXXXXXXXXXXXXXXXXXXXXXX 642
+ Y S+YG + + R V G
Sbjct: 600 DTLYNIQRSKYGSQQAFYITE-KIGRSQYFGVQGLSQEAKDAINAEISKFKEKIEQKKRA 658
Query: 643 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLES-IEKEDDINTA 701
+ + I+ +L + + I +I KRK+ E++ I+ R +L++ IE + +
Sbjct: 659 YEGHRNNIDSFNERLTEIKHYIHDI----KRKQSELQE-ISKRAGQLQTKIELKKEREQK 713
Query: 702 LAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQH 761
L K + I+ F+ I+ K L + S + + E K+++LE ++
Sbjct: 714 LEKDSKRDYSSKIRMFEQKIDEKYLASGELFASLSNSVLELCEKENQMKLKKLEIIGYKN 773
Query: 762 EKLALQASL-----HYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEE 816
+KL ++ L E K + ++ + K Q+E AF E+E++ E T E
Sbjct: 774 KKLTAESLLDELGARQEKLKNDYNRYKREYDEIK-QSE--AF--KEIERQN-EAYTDEER 827
Query: 817 LEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEK 876
A + N F I + + + ++ L+T LK+ L +I L E
Sbjct: 828 SRLADLAQVYVENGTF-TEATIRSKIDLLEDELSLLTTADRGSIDALKQKLQDIQ-LAET 885
Query: 877 WLPTLRNLVAQINETFSRNFQEMAVAGEVS 906
LP L+ ++ +T + QE GE++
Sbjct: 886 NLPLLQTEKERL-DTRIKGIQE-EYEGELT 913
Score = 353 (129.3 bits), Expect = 2.6e-28, P = 2.6e-28
Identities = 114/384 (29%), Positives = 194/384 (50%)
Query: 644 QTEQRLIEDEAAKLQKEREEIINIVQ-IEKRKRREMENHINLRKRKLESIEKEDDINTAL 702
Q+E + I A +LQ + E Q +EK +R+ + I + ++K++ EK
Sbjct: 687 QSELQEISKRAGQLQTKIELKKEREQKLEKDSKRDYSSKIRMFEQKID--EKYLASGELF 744
Query: 703 AKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHE 762
A L + +L ++ + +++K L EI+ K E A+ +L+ + +++
Sbjct: 745 ASLSNSVLELCEKENQ--MKLKKL--EIIGYKNKKLTAESLLDELGARQEKLKNDYNRYK 800
Query: 763 KLALQASLHYEDCKKEVEHCRKHLSDAKR-QAESIAFITPELEKEFLEMPTTIEELEAAI 821
+ + + KE+E + +D +R + +A + E F E TI +
Sbjct: 801 RE--YDEIKQSEAFKEIERQNEAYTDEERSRLADLAQVYVE-NGTFTE--ATIRSKIDLL 855
Query: 822 QDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTL 881
+D +S + ++ + + + + I+ T + E +R I ++E++ L
Sbjct: 856 EDELSLLTTA---DRGSIDALKQKLQDIQLAETNLPLLQTEKERLDTRIKGIQEEYEGEL 912
Query: 882 RNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVLSAHHQSG 941
+LV +I+ F++ F ++A G V L + E F + + I VKFRQ +L+VL QSG
Sbjct: 913 TSLVNKISLAFNKRFTKVASDGRVQLAKSER-FKDWKLQILVKFRQESELKVLDHQSQSG 971
Query: 942 GERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTPQCFLLT 1001
GER+VSTI +++SLQ LT+ PFR+VDEINQGMDP NE+ + LV A Q + Q FL+T
Sbjct: 972 GERAVSTIFFIMSLQGLTDAPFRIVDEINQGMDPKNEQMAHRYLVHTACQNSKSQYFLVT 1031
Query: 1002 PKLLPDLEYSEACSILNIMNGPWI 1025
PKLL L Y + I GP+I
Sbjct: 1032 PKLLTGLYYHPDMVVHCIFTGPYI 1055
>UNIPROTKB|Q59UE8 [details] [associations]
symbol:SMC5 "Potential nuclear DNA repair complex SMC
ATPase" species:237561 "Candida albicans SC5314" [GO:0009267
"cellular response to starvation" evidence=IMP] [GO:0030447
"filamentous growth" evidence=IMP] [GO:0036170 "filamentous growth
of a population of unicellular organisms in response to starvation"
evidence=IMP] [GO:0036180 "filamentous growth of a population of
unicellular organisms in response to biotic stimulus" evidence=IMP]
[GO:0071216 "cellular response to biotic stimulus" evidence=IMP]
InterPro:IPR027131 InterPro:IPR003395 CGD:CAL0001481 Pfam:PF02463
GO:GO:0005524 GO:GO:0007059 GO:GO:0071216 GO:GO:0036180
GO:GO:0003677 GO:GO:0009267 GO:GO:0030261 GO:GO:0036170
EMBL:AACQ01000131 EMBL:AACQ01000130 GO:GO:0009295 eggNOG:COG1196
PANTHER:PTHR19306:SF1 RefSeq:XP_713250.1 RefSeq:XP_713303.1
ProteinModelPortal:Q59UE8 STRING:Q59UE8 GeneID:3645087
GeneID:3645103 KEGG:cal:CaO19.2417 KEGG:cal:CaO19.9955
HOGENOM:HOG000247851 Uniprot:Q59UE8
Length = 1073
Score = 410 (149.4 bits), Expect = 1.7e-34, P = 1.7e-34
Identities = 213/930 (22%), Positives = 379/930 (40%)
Query: 7 KRLKVSRGEDDYMPGNIIEIELHNFMTFDHLICKPGSRLNLVIGPNGSGKSSLVCAIALA 66
KR KV + PG I ++ + NF T+ + LN++IGPNGSGKS+LV +I +
Sbjct: 11 KRRKVLE-PSKFRPGFIRKVRVWNFTTYSYTEFNLSPTLNMIIGPNGSGKSTLVASICIG 69
Query: 67 LGGDTQLLGRATSIGAYVKRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKV 126
L G L+ R ++ + +K G+E ++I++ + I R+ T +S W N K
Sbjct: 70 LAGSINLIKRK-NLKSMIKTGQEKSSVEITIENYEGHSPIVIKREF-TAKESNWTVNNKR 127
Query: 127 VPKGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCAL 186
+ ++ +I +FNIQ++NL FLPQ+RV EFA LSP KLL ETE+ +GD L + H L
Sbjct: 128 ATESKIKDIRTKFNIQLDNLCHFLPQERVAEFAGLSPEKLLMETERTLGDGHLLIMHEDL 187
Query: 187 VEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKY 246
+ K ++ + + +K L +L + E++ ++ + E+V++ + +P+ KY
Sbjct: 188 IAKDNESQQLGNKIKDIEGRLAKLHEDRSKLEEEARKLEEYDRKSEEVDNHRLLIPYAKY 247
Query: 247 -DMKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGK--KQEKAILDGDCK------K 297
D+K T KP+E EK+I + K
Sbjct: 248 QDLKNQR-----THLKRLRDEAKHKLRTFQANFKPLENDIANAEKSINEESEKYSHLKDS 302
Query: 298 LSSLINENSKRRMDFLEKVDQGVQVQGKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXX 357
L S +NE ++ + + + +++ K I K
Sbjct: 303 LKSTLNEINQHKSTQKQVTTEISELRANLKSYQTRAEQKKKELEEIKKEIAELQEKQRGL 362
Query: 358 QTVPAYEPPHDKIEKLGS--QILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDM 415
V E + E ++ +L Q + Q+S+ + L LR RL
Sbjct: 363 PQVDPEEMQNLSTESTSKRHELRDLEEQFQEVNSQRSDIGRELTHLTEQLRGAEKRLST- 421
Query: 416 EDKNNKLLHALRNSGAENIF--EAYCWLQQHRHELNKEA-Y--GPVLLEVNVSNRAHANY 470
+DK + L+ R +G EA+ ++ R+E E Y PV+ NV + +A
Sbjct: 422 KDKLDMLVSDARQNGRSYRLRDEAFDVHKRLRNEPEYEGRYFEAPVI-SCNVPDINYAAA 480
Query: 471 LEDHVGHYIWKSFITQDAGDRDFLAKNLKPFDVPI-LNYVSNESSRKEPFQISEEMRALG 529
E + + +F + D DFL+K + + L V++ + + ++R G
Sbjct: 481 AEKIIDNNTLFAFTVTNQSDFDFLSKFSQQTNTNTPLRMVNSVVNPTHEYS-KHQLREFG 539
Query: 530 ISARLDQVFDAPHAVKEVLISQFGLDSSYIG----SKETDQKADNVA---KLGILDFWTP 582
L P V +L S + + + S E ++ NV+ +L F
Sbjct: 540 FEGYLSDYIVGPKEVLSMLYSTSKIHTIPVSKHQLSSEQVRRLTNVSGNDRLPFTKFVAG 599
Query: 583 ENHYRWSISRYGGHVSASVEPVNQSRLLLCSVDGNXXXXXXXXXXXXXXXXXXXXXXXXX 642
+ Y S+YG + + R V G
Sbjct: 600 DTLYNIQRSKYGSQQAFYITE-KIGRSQYFGVQGLSQEAKDAINAEISKFKEKIEQKKRA 658
Query: 643 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLES-IEKEDDINTA 701
+ + I+ +L + + I +I KRK+ E++ I+ R +L++ IE + +
Sbjct: 659 YEGHRNNIDSFNERLTEIKHYIHDI----KRKQSELQE-ISKRAGQLQTKIELKKEREQK 713
Query: 702 LAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQH 761
L K + I+ F+ I+ K L + S + + E K+++LE ++
Sbjct: 714 LEKDSKRDYSSKIRMFEQKIDEKYLASGELFASLSNSVLELCEKENQMKLKKLEIIGYKN 773
Query: 762 EKLALQASL-----HYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEE 816
+KL ++ L E K + ++ + K Q+E AF E+E++ E T E
Sbjct: 774 KKLTAESLLDELGARQEKLKNDYNRYKREYDEIK-QSE--AF--KEIERQN-EAYTDEER 827
Query: 817 LEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEK 876
A + N F I + + + ++ L+T LK+ L +I L E
Sbjct: 828 SRLADLAQVYVENGTF-TEATIRSKIDLLEDELSLLTTADRGSIDALKQKLQDIQ-LAET 885
Query: 877 WLPTLRNLVAQINETFSRNFQEMAVAGEVS 906
LP L+ ++ +T + QE GE++
Sbjct: 886 NLPLLQTEKERL-DTRIKGIQE-EYEGELT 913
Score = 353 (129.3 bits), Expect = 2.6e-28, P = 2.6e-28
Identities = 114/384 (29%), Positives = 194/384 (50%)
Query: 644 QTEQRLIEDEAAKLQKEREEIINIVQ-IEKRKRREMENHINLRKRKLESIEKEDDINTAL 702
Q+E + I A +LQ + E Q +EK +R+ + I + ++K++ EK
Sbjct: 687 QSELQEISKRAGQLQTKIELKKEREQKLEKDSKRDYSSKIRMFEQKID--EKYLASGELF 744
Query: 703 AKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHE 762
A L + +L ++ + +++K L EI+ K E A+ +L+ + +++
Sbjct: 745 ASLSNSVLELCEKENQ--MKLKKL--EIIGYKNKKLTAESLLDELGARQEKLKNDYNRYK 800
Query: 763 KLALQASLHYEDCKKEVEHCRKHLSDAKR-QAESIAFITPELEKEFLEMPTTIEELEAAI 821
+ + + KE+E + +D +R + +A + E F E TI +
Sbjct: 801 RE--YDEIKQSEAFKEIERQNEAYTDEERSRLADLAQVYVE-NGTFTE--ATIRSKIDLL 855
Query: 822 QDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTL 881
+D +S + ++ + + + + I+ T + E +R I ++E++ L
Sbjct: 856 EDELSLLTTA---DRGSIDALKQKLQDIQLAETNLPLLQTEKERLDTRIKGIQEEYEGEL 912
Query: 882 RNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVLSAHHQSG 941
+LV +I+ F++ F ++A G V L + E F + + I VKFRQ +L+VL QSG
Sbjct: 913 TSLVNKISLAFNKRFTKVASDGRVQLAKSER-FKDWKLQILVKFRQESELKVLDHQSQSG 971
Query: 942 GERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTPQCFLLT 1001
GER+VSTI +++SLQ LT+ PFR+VDEINQGMDP NE+ + LV A Q + Q FL+T
Sbjct: 972 GERAVSTIFFIMSLQGLTDAPFRIVDEINQGMDPKNEQMAHRYLVHTACQNSKSQYFLVT 1031
Query: 1002 PKLLPDLEYSEACSILNIMNGPWI 1025
PKLL L Y + I GP+I
Sbjct: 1032 PKLLTGLYYHPDMVVHCIFTGPYI 1055
>UNIPROTKB|Q6P9I7 [details] [associations]
symbol:smc6 "Structural maintenance of chromosomes protein
6" species:8355 "Xenopus laevis" [GO:0000722 "telomere maintenance
via recombination" evidence=ISS] [GO:0000781 "chromosome, telomeric
region" evidence=ISS] [GO:0016605 "PML body" evidence=ISS]
[GO:0030915 "Smc5-Smc6 complex" evidence=ISS] [GO:0090398 "cellular
senescence" evidence=ISS] InterPro:IPR010935 InterPro:IPR027132
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0016605
GO:GO:0006281 HSSP:P58301 GO:GO:0000781 GO:GO:0000722 GO:GO:0090398
SUPFAM:SSF75553 GO:GO:0030915 PANTHER:PTHR19306:SF2 CTD:79677
HOVERGEN:HBG093964 EMBL:AB103031 EMBL:BC060747
RefSeq:NP_001083550.1 UniGene:Xl.23516 ProteinModelPortal:Q6P9I7
IntAct:Q6P9I7 GeneID:398986 KEGG:xla:398986 Xenbase:XB-GENE-6071335
Uniprot:Q6P9I7
Length = 1128
Score = 213 (80.0 bits), Expect = 4.2e-29, Sum P(3) = 4.2e-29
Identities = 98/403 (24%), Positives = 185/403 (45%)
Query: 645 TEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHIN-LRKR--KLESIEKEDDINTA 701
++ + A + K+ +E I++ +++++ + L +R +LE++E++ I+
Sbjct: 718 SQMATFQQRAQSVDKDIKENEGILRQYHNSKKQIQIDLRPLLERISELENVEEQPSID-- 775
Query: 702 LAKLVDQAAD-LN-IQQFKYAIEIK-----NLLVEIVSCKWSYAE--KHMASI-EFDAKI 751
+A L +A + LN I+ K +E+ NL + + + +Y E K ++S+ E +
Sbjct: 776 IATLEGEAEENLNKIELVKQEVELAKEKMGNLKSFLTTAEINYEEIKKKISSVAEVAEPV 835
Query: 752 RELEFNLKQHEKLALQASLHYEDCKKE-VEHCRKHLSD--AKRQAESIAFITPE-LEKEF 807
+E + Q + + HYE+ KE ++ +K + AK Q + + + E
Sbjct: 836 KEDLHRVDQEVENCKRHRKHYEEKLKEHLDRIQKRKEEVAAKEQELEVKISQAKCICPER 895
Query: 808 LEMPTTIEELEAAIQDNISQANSIFFLNQN---ILQEYEHRQRQIEDLSTKQEADKKELK 864
+E+ T L+ I + NS L+ N I+++Y + + +D+ E K LK
Sbjct: 896 IEVSRTARSLDTEINRLREKINSEEVLHGNREEIIKQYHEAKERYQDV----EGKVKHLK 951
Query: 865 RF---LAEIDALKEKWLPTLRN-LVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGIL 920
RF L EI A + K R L + F + A +G+++ D H+++ +
Sbjct: 952 RFIKLLDEIMAQRYKSYQQFRRCLTFRCKIYFDSLLSQRAYSGKINFD-HKNET----LS 1006
Query: 921 IKVKFRQSGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERK 980
I V+ + + + SGGERS ST+ +++SL + PFR +DE + MD +N R
Sbjct: 1007 ITVQPGEGNKAALSDMKCLSGGERSFSTVCFILSLWSIAESPFRCLDEFDVYMDMVNRRI 1066
Query: 981 MFQQLVRAASQPNTPQCFLLTPKLLPDLEYSEACSILNIMNGP 1023
++ A Q LLTP+ + L + IL M P
Sbjct: 1067 SMDMMLSMADSQRFRQFILLTPQNMSSLPSTSLVRILR-MKDP 1108
Score = 210 (79.0 bits), Expect = 4.2e-29, Sum P(3) = 4.2e-29
Identities = 72/252 (28%), Positives = 121/252 (48%)
Query: 10 KVSRGEDDYMPGNIIE-IELHNFMTFDHLICKP---GSRLNLVIGPNGSGKSSLVCAIAL 65
+VS + IIE I L NFM H + P G +N VIG NGSGKS+++ A+ +
Sbjct: 73 RVSASQSGTGDVGIIESIFLRNFMC--HSMLGPFRFGPNVNFVIGNNGSGKSAVLTALIV 130
Query: 66 ALGGDTQLLGRATSIGAYVKRGEESGYIKISLRGDTKEEH--------LTIMRKIDTRNK 117
LGG + R +SI +VK G+ I I+LR ++ + +T+ +++ T
Sbjct: 131 GLGGKAAITNRGSSIKGFVKEGQTFAEISITLRNRGQDAYKPDVFGNSITVQQRLTTDGS 190
Query: 118 SEWFFN---GKVVP--KGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKL-SPVKLLEETE 171
+ G VV K E+ I FNIQV+N L Q+ F + + +
Sbjct: 191 RTYKLKSATGAVVSNKKEELTAILDHFNIQVDNPVSVLTQEMSKHFLQSKNESDKYKFFM 250
Query: 172 KAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELL 231
KA Q+ + ++E +K +T + V+ G+ L L+ +++E+ + + E+
Sbjct: 251 KATQLEQMKEDYSYIME--TKSRTHD-QVENGGERLRDLRQECIQKEERFKSIASLGEMK 307
Query: 232 EKVESMKKKLPW 243
EK+E +K K+ W
Sbjct: 308 EKLEDLKNKMAW 319
Score = 70 (29.7 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 39/187 (20%), Positives = 73/187 (39%)
Query: 691 SIEKEDDINTALAKLVDQAADLNIQQF---KYAIEIKNLLVEIVSCKWSYAEKHMASIEF 747
+++ E I K+++ +Q K E L + + K +K + E
Sbjct: 343 TVKYEQKIEECQGKVINAEEKFRAKQEELDKITQEAVALKPQGIGLKEDVQKKRKSYNES 402
Query: 748 DAKIRELEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAK-RQAESIAFITPELEKE 806
+ LK+ E+ A Q E+ KK ++ + A+ ++ I L +
Sbjct: 403 EVLYNRHRMELKRLERDAEQLHKRIEELKKSADNDSESEKMARQKEINQIRERMKALHDK 462
Query: 807 FLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRF 866
+ I + + AI+ + I +NI Q E +RQ+++L E+ LKRF
Sbjct: 463 DITTNQQIHQFQQAIEKYKEERARIGNEERNIKQRLEQHKRQLKEL---HESKTDRLKRF 519
Query: 867 LAEIDAL 873
+ AL
Sbjct: 520 GQNMPAL 526
Score = 64 (27.6 bits), Expect = 2.4e-14, Sum P(2) = 2.4e-14
Identities = 25/124 (20%), Positives = 53/124 (42%)
Query: 200 VKRNGDTLNQLKALNVEQEKDVERVRQRAELLEK-VESMKKKLPWLKYDMKKAEY--IXX 256
V++ + N+ + L +++R+ + AE L K +E +KK K A I
Sbjct: 392 VQKKRKSYNESEVLYNRHRMELKRLERDAEQLHKRIEELKKSADNDSESEKMARQKEINQ 451
Query: 257 XXXXXXXXXXXXXXXNT-LHEFSKPIEGKKQEKAILDGDCKKLSSLINENSKRRMDFLE- 314
N +H+F + IE K+E+A + + + + + ++ ++ + E
Sbjct: 452 IRERMKALHDKDITTNQQIHQFQQAIEKYKEERARIGNEERNIKQRLEQHKRQLKELHES 511
Query: 315 KVDQ 318
K D+
Sbjct: 512 KTDR 515
Score = 59 (25.8 bits), Expect = 9.0e-14, Sum P(3) = 9.0e-14
Identities = 36/155 (23%), Positives = 71/155 (45%)
Query: 767 QASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNIS 826
+A+L D + E+ H K L + Q + ++K+ E + + + + I
Sbjct: 694 RATLLSRDVEAEISHLEKELRNFGSQMATFQQRAQSVDKDIKENEGILRQYHNS-KKQI- 751
Query: 827 QANSIFFLNQNILQEYEHRQRQIE-DLSTKQ-EADKK--ELKRFLAEIDALKEKWLPTLR 882
Q + L + + E E+ + Q D++T + EA++ +++ E++ KEK + L+
Sbjct: 752 QIDLRPLLER--ISELENVEEQPSIDIATLEGEAEENLNKIELVKQEVELAKEK-MGNLK 808
Query: 883 NLV--AQIN-ETFSRNFQEMA-VAGEVSLDEHESD 913
+ + A+IN E + +A VA V D H D
Sbjct: 809 SFLTTAEINYEEIKKKISSVAEVAEPVKEDLHRVD 843
Score = 53 (23.7 bits), Expect = 3.4e-13, Sum P(2) = 3.4e-13
Identities = 14/52 (26%), Positives = 31/52 (59%)
Query: 367 HDKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDK 418
HD++E G ++ +L Q+ +QK E+ K + +L + ++L+D+++K
Sbjct: 273 HDQVENGGERLRDL----RQECIQKEERFKSI----ASLGEMKEKLEDLKNK 316
Score = 50 (22.7 bits), Expect = 9.0e-14, Sum P(3) = 9.0e-14
Identities = 27/146 (18%), Positives = 67/146 (45%)
Query: 644 QTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKE-DDINTAL 702
Q E I EA L+ + + VQ +++ E E N + +L+ +E++ + ++ +
Sbjct: 368 QEELDKITQEAVALKPQGIGLKEDVQKKRKSYNESEVLYNRHRMELKRLERDAEQLHKRI 427
Query: 703 AKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHE 762
+L ++AD + + K A + K EI + H I + +I + + +++++
Sbjct: 428 EEL-KKSADNDSESEKMARQ-K----EINQIRERMKALHDKDITTNQQIHQFQQAIEKYK 481
Query: 763 KLALQASLHYEDCKKEVEHCRKHLSD 788
+ + + K+ +E ++ L +
Sbjct: 482 EERARIGNEERNIKQRLEQHKRQLKE 507
Score = 47 (21.6 bits), Expect = 1.3e-13, Sum P(4) = 1.3e-13
Identities = 17/72 (23%), Positives = 35/72 (48%)
Query: 645 TEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHIN----LRKRKLESIEKEDDINT 700
T Q++ + + A ++K +EE I E+ ++ +E H L + K + +++
Sbjct: 466 TNQQIHQFQQA-IEKYKEERARIGNEERNIKQRLEQHKRQLKELHESKTDRLKRFGQNMP 524
Query: 701 ALAKLVDQAADL 712
AL +D+A L
Sbjct: 525 ALLAAIDEADKL 536
Score = 45 (20.9 bits), Expect = 4.2e-29, Sum P(3) = 4.2e-29
Identities = 20/78 (25%), Positives = 40/78 (51%)
Query: 373 LGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAE 432
L Q + L +KR +E E + N++++ L+ RL+ ++ +K + L+ S A+
Sbjct: 381 LKPQGIGLKEDVQKKRKSYNESEVLYNRHRMELK----RLERDAEQLHKRIEELKKS-AD 435
Query: 433 NIFEAYCWLQQHRHELNK 450
N E+ +Q E+N+
Sbjct: 436 NDSESEKMARQK--EINQ 451
Score = 45 (20.9 bits), Expect = 4.7e-12, Sum P(2) = 4.7e-12
Identities = 20/70 (28%), Positives = 33/70 (47%)
Query: 369 KIEKLGSQILELGVQAN--QKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHAL 426
+I L ++ G Q Q+R Q +K+ + +N+ LRQ + K ++ LL
Sbjct: 705 EISHLEKELRNFGSQMATFQQRAQSVDKD--IKENEGILRQYHNSKKQIQIDLRPLLE-- 760
Query: 427 RNSGAENIFE 436
R S EN+ E
Sbjct: 761 RISELENVEE 770
>UNIPROTKB|Q96SB8 [details] [associations]
symbol:SMC6 "Structural maintenance of chromosomes protein
6" species:9606 "Homo sapiens" [GO:0000724 "double-strand break
repair via homologous recombination" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030915 "Smc5-Smc6 complex"
evidence=IDA] [GO:0000722 "telomere maintenance via recombination"
evidence=IMP] [GO:0000781 "chromosome, telomeric region"
evidence=IDA] [GO:0090398 "cellular senescence" evidence=IMP]
[GO:0016605 "PML body" evidence=IDA] [GO:0005622 "intracellular"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR027132 InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524
EMBL:CH471053 GO:GO:0016605 GO:GO:0006281 HSSP:P58301 GO:GO:0000781
GO:GO:0000722 GO:GO:0090398 eggNOG:COG1196 GO:GO:0030915
PANTHER:PTHR19306:SF2 EMBL:AJ310551 EMBL:AL136544 EMBL:AK025769
EMBL:AK292421 EMBL:AL832979 EMBL:AC097377 EMBL:BC032675
EMBL:BC039828 IPI:IPI00154528 IPI:IPI00816217 RefSeq:NP_001135758.1
RefSeq:NP_078900.1 UniGene:Hs.526728 ProteinModelPortal:Q96SB8
SMR:Q96SB8 DIP:DIP-34562N IntAct:Q96SB8 STRING:Q96SB8
PhosphoSite:Q96SB8 DMDM:122070455 PaxDb:Q96SB8 PRIDE:Q96SB8
DNASU:79677 Ensembl:ENST00000351948 Ensembl:ENST00000381272
Ensembl:ENST00000402989 Ensembl:ENST00000448223 GeneID:79677
KEGG:hsa:79677 UCSC:uc002rcn.3 UCSC:uc002rcp.1 CTD:79677
GeneCards:GC02M017845 HGNC:HGNC:20466 MIM:609387 neXtProt:NX_Q96SB8
PharmGKB:PA134892702 HOGENOM:HOG000286038 HOVERGEN:HBG093964
InParanoid:Q96SB8 OMA:LHYKELK OrthoDB:EOG44QT04 PhylomeDB:Q96SB8
ChiTaRS:SMC6 GenomeRNAi:79677 NextBio:68922 ArrayExpress:Q96SB8
Bgee:Q96SB8 CleanEx:HS_SMC6 Genevestigator:Q96SB8 Uniprot:Q96SB8
Length = 1091
Score = 216 (81.1 bits), Expect = 7.3e-29, Sum P(3) = 7.3e-29
Identities = 102/391 (26%), Positives = 171/391 (43%)
Query: 659 KEREEIINIVQIEKRKRREMENHINLRK-RKLESIEKEDDINTALAKLVDQAADLNIQQF 717
K EE++ Q+ K +M+ N+ + R+LE+IE+ ++ +A L D+A + N +
Sbjct: 697 KHNEELLKRCQLHY-KELKMKIRKNISEIRELENIEEHQSVD--IATLEDEAQE-NKSKM 752
Query: 718 KYAIEI----KNLLVEIVSCKWSYAEKHMASIEFDA-KIRELEFNLKQHEKLA------- 765
K E K + + S K AE +I+F ++ EL LK LA
Sbjct: 753 KMVEEHMEQQKENMEHLKSLKIE-AENKYDAIKFKINQLSELADPLKDELNLADSEVDNQ 811
Query: 766 LQASLHYEDC-----------KKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTI 814
+ HYE+ K+E++ K L + QA I E+EK + I
Sbjct: 812 KRGKRHYEEKQKEHLDTLNKKKRELDMKEKELEEKMSQARQICPERIEVEKSASILDKEI 871
Query: 815 EELEAAIQ-DNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDAL 873
L IQ ++ S + + I+++Y+ + DL +K KK +K L EI
Sbjct: 872 NRLRQKIQAEHASHGD-----REEIMRQYQEARETYLDLDSKVRTLKKFIK-LLGEIMEH 925
Query: 874 KEKWLPTLRN-LVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLE 932
+ K R L + F + A G+++ D H+++ + I V+ + +
Sbjct: 926 RFKTYQQFRRCLTLRCKLYFDNLLSQRAYCGKMNFD-HKNET----LSISVQPGEGNKAA 980
Query: 933 VLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQP 992
SGGERS ST+ +++SL + PFR +DE + MD +N R +++ A
Sbjct: 981 FNDMRALSGGERSFSTVCFILSLWSIAESPFRCLDEFDVYMDMVNRRIAMDLILKMADSQ 1040
Query: 993 NTPQCFLLTPKLLPDLEYSEACSILNIMNGP 1023
Q LLTP+ + L S+ IL M+ P
Sbjct: 1041 RFRQFILLTPQSMSSLPSSKLIRILR-MSDP 1070
Score = 195 (73.7 bits), Expect = 7.3e-29, Sum P(3) = 7.3e-29
Identities = 73/240 (30%), Positives = 118/240 (49%)
Query: 23 IIE-IELHNFMTFDHL-ICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI 80
IIE I L NFM L K GS +N V+G NGSGKS+++ A+ + LGG R +S+
Sbjct: 47 IIESIHLKNFMCHSMLGPFKFGSNVNFVVGNNGSGKSAVLTALIVGLGGRAVATNRGSSL 106
Query: 81 GAYVKRGEESGYIKISLR--GDTK------------EEHLTIMRKIDTRNKSEWFFNGKV 126
+VK G+ S I I+LR GD ++H++I + KS G V
Sbjct: 107 KGFVKDGQNSADISITLRNRGDDAFKASVYGNSILIQQHISIDGSRSYKLKSA---TGSV 163
Query: 127 VP--KGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKL-SPVKLLEETEKAVGDPQLPVQH 183
V K E++ I FNIQV+N L Q+ +F + + + KA Q+ +
Sbjct: 164 VSTRKEELIAILDHFNIQVDNPVSVLTQEMSKQFLQSKNEGDKYKFFMKATQLEQMKEDY 223
Query: 184 CALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPW 243
++E +K +T E + + + L +LK VE+E+ + + + + +ES+K ++ W
Sbjct: 224 SYIME--TKERTKE-QIHQGEERLTELKRQCVEKEERFQSIAGLSTMKTNLESLKHEMAW 280
Score = 85 (35.0 bits), Expect = 1.4e-14, Sum P(3) = 1.4e-14
Identities = 31/125 (24%), Positives = 60/125 (48%)
Query: 754 LEFNLKQHEKLALQASLHYEDCK----KEVEHCRKHLSDAKRQAESIAFITPELEKEFLE 809
LE ++K +E+L + LHY++ K K + R+ + + Q+ IA + E ++ +
Sbjct: 692 LEKDIKHNEELLKRCQLHYKELKMKIRKNISEIRELENIEEHQSVDIATLEDEAQENKSK 751
Query: 810 MPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAE 869
M E +E ++N+ S+ +N +Y+ + +I LS + K EL +E
Sbjct: 752 MKMVEEHMEQQ-KENMEHLKSLKIEAEN---KYDAIKFKINQLSELADPLKDELNLADSE 807
Query: 870 IDALK 874
+D K
Sbjct: 808 VDNQK 812
Score = 81 (33.6 bits), Expect = 3.2e-14, Sum P(2) = 3.2e-14
Identities = 49/225 (21%), Positives = 104/225 (46%)
Query: 656 KLQKEREEIINIVQIEKRKRREMENHINLRKRKL-ESIEKEDDINTALAKLVDQAADLNI 714
+++K+ I + ++I + + ++ + ++ +L E+ +K DI L K+ ++ N
Sbjct: 285 EIEKQLNAIRDNIKIGEDRAARLDRKMEEQQVRLNEAEQKYKDIQDKLEKISEET---NA 341
Query: 715 QQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYED 774
+ A E L ++V+ K +Y E A + ++ + E + K E+L + E+
Sbjct: 342 R----APECMALKADVVAKKRAYNE---AEVLYNRSLNEYKALKKDDEQLCKRI----EE 390
Query: 775 CKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTT----IEELEAAIQDNISQANS 830
KK + + +RQ + I+++ E K F + IE+ + AI+ + +
Sbjct: 391 LKKSTDQSLEP-ERLERQ-KKISWLK-ERVKAFQNQENSVNQEIEQFQQAIEKDKEEHGK 447
Query: 831 IFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKE 875
I ++ + QRQ+++L + D+ LKRF + AL E
Sbjct: 448 IKREELDVKHALSYNQRQLKELKDSK-TDR--LKRFGPNVPALLE 489
Score = 69 (29.3 bits), Expect = 1.2e-13, Sum P(3) = 1.2e-13
Identities = 39/178 (21%), Positives = 82/178 (46%)
Query: 653 EAAKLQKEREEIINIVQ-IEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAAD 711
+ A L+ E +E + ++ +E+ ++ EN +L+ K+E+ K D I + +L + A
Sbjct: 737 DIATLEDEAQENKSKMKMVEEHMEQQKENMEHLKSLKIEAENKYDAIKFKINQLSELADP 796
Query: 712 LNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIE-FDAKIRELEFNLKQ-HEKLALQAS 769
L + E+ N K Y EK ++ + K REL+ K+ EK++
Sbjct: 797 LKDELNLADSEVDNQK----RGKRHYEEKQKEHLDTLNKKKRELDMKEKELEEKMSQARQ 852
Query: 770 LHYE--DCKKEVEHCRKHLSDAKR--QAESIAF-ITPELEKEFLEMPTTIEELEAAIQ 822
+ E + +K K ++ ++ QAE + E+ +++ E T +L++ ++
Sbjct: 853 ICPERIEVEKSASILDKEINRLRQKIQAEHASHGDREEIMRQYQEARETYLDLDSKVR 910
Score = 60 (26.2 bits), Expect = 5.6e-15, Sum P(3) = 5.6e-15
Identities = 24/90 (26%), Positives = 40/90 (44%)
Query: 165 KLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQE---KDV 221
K+ EET P+ +V K E R+ LN+ KAL + E K +
Sbjct: 334 KISEETNARA--PECMALKADVVAKKRAYNEAEVLYNRS---LNEYKALKKDDEQLCKRI 388
Query: 222 ERVRQRAELLEKVESMK--KKLPWLKYDMK 249
E +++ + + E ++ KK+ WLK +K
Sbjct: 389 EELKKSTDQSLEPERLERQKKISWLKERVK 418
Score = 55 (24.4 bits), Expect = 1.6e-11, Sum P(3) = 1.6e-11
Identities = 32/153 (20%), Positives = 65/153 (42%)
Query: 774 DCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIFF 833
D + EVE+ + + ++ ++ E+ +EL+ I+ NIS+ +
Sbjct: 670 DLENEVENKTAQILNLQQHLSALEKDIKHNEELLKRCQLHYKELKMKIRKNISEIREL-- 727
Query: 834 LNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLVAQINETFS 893
+NI E EH+ I L + + +K ++K ++ KE + L++L + +
Sbjct: 728 --ENI--E-EHQSVDIATLEDEAQENKSKMKMVEEHMEQQKEN-MEHLKSLKIEAENKYD 781
Query: 894 ------RNFQEMA--VAGEVSLDEHESDFDKFG 918
E+A + E++L + E D K G
Sbjct: 782 AIKFKINQLSELADPLKDELNLADSEVDNQKRG 814
Score = 54 (24.1 bits), Expect = 7.3e-29, Sum P(3) = 7.3e-29
Identities = 20/69 (28%), Positives = 35/69 (50%)
Query: 368 DKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALR 427
+++E +QIL L Q+ L EK+ + N+ L++C K+++ K K + +R
Sbjct: 673 NEVENKTAQILNL-----QQHLSALEKD--IKHNEELLKRCQLHYKELKMKIRKNISEIR 725
Query: 428 NSGAENIFE 436
ENI E
Sbjct: 726 E--LENIEE 732
Score = 53 (23.7 bits), Expect = 4.9e-12, Sum P(3) = 4.9e-12
Identities = 29/151 (19%), Positives = 62/151 (41%)
Query: 650 IEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLES-IEKEDDINTALAKLVDQ 708
+E A+ L KE + +Q E + E + + E+ ++ + + T L K +
Sbjct: 860 VEKSASILDKEINRLRQKIQAEHASHGDREEIMRQYQEARETYLDLDSKVRT-LKKFIKL 918
Query: 709 AADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQA 768
++ +FK + + L + CK Y + ++ + K + F+ H+ L
Sbjct: 919 LGEIMEHRFKTYQQFRRCLT--LRCKL-YFDNLLSQRAYCGK---MNFD---HKNETLSI 969
Query: 769 SLHYEDCKKEVEHCRKHLSDAKRQAESIAFI 799
S+ + K + + LS +R ++ FI
Sbjct: 970 SVQPGEGNKAAFNDMRALSGGERSFSTVCFI 1000
Score = 47 (21.6 bits), Expect = 3.9e-28, Sum P(3) = 3.9e-28
Identities = 11/55 (20%), Positives = 31/55 (56%)
Query: 368 DKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKL 422
++IEK + I + ++ + R + +++ + + ++ L + + KD++DK K+
Sbjct: 284 NEIEKQLNAIRD-NIKIGEDRAARLDRK--MEEQQVRLNEAEQKYKDIQDKLEKI 335
Score = 45 (20.9 bits), Expect = 1.6e-10, Sum P(3) = 1.6e-10
Identities = 24/104 (23%), Positives = 50/104 (48%)
Query: 776 KKEVEHCRKHLSDAKRQAESIAFITPELEK-EFL--EMPTTIEELEAAIQDNISQANSIF 832
+K ++CR+ + Q + + + E + +FL ++ + I +LE +++ +Q I
Sbjct: 627 QKPPKNCREAFTADGDQVFAGRYYSSENTRPKFLSRDVDSEISDLENEVENKTAQ---IL 683
Query: 833 FLNQNILQEYEHRQRQIEDLSTKQEADKKELK-RFLAEIDALKE 875
L Q+ L E + E+L + + KELK + I ++E
Sbjct: 684 NLQQH-LSALEKDIKHNEELLKRCQLHYKELKMKIRKNISEIRE 726
Score = 39 (18.8 bits), Expect = 2.6e-27, Sum P(3) = 2.6e-27
Identities = 14/46 (30%), Positives = 27/46 (58%)
Query: 651 EDEAAKLQKEREEI-INIVQIEKRKRREMENHINLRKRKLESIEKE 695
ED AA+L ++ EE + + + E+ K +++++ KLE I +E
Sbjct: 301 EDRAARLDRKMEEQQVRLNEAEQ-KYKDIQD-------KLEKISEE 338
>RGD|1311214 [details] [associations]
symbol:Smc6 "structural maintenance of chromosomes 6"
species:10116 "Rattus norvegicus" [GO:0000722 "telomere maintenance
via recombination" evidence=IEA;ISO] [GO:0000724 "double-strand
break repair via homologous recombination" evidence=IEA]
[GO:0000781 "chromosome, telomeric region" evidence=IEA;ISO]
[GO:0005622 "intracellular" evidence=ISO] [GO:0016605 "PML body"
evidence=IEA;ISO] [GO:0030915 "Smc5-Smc6 complex" evidence=IEA;ISO]
[GO:0090398 "cellular senescence" evidence=IEA;ISO]
InterPro:IPR027132 InterPro:IPR003395 Pfam:PF02463 RGD:1311214
GO:GO:0016605 GO:GO:0000781 GO:GO:0000722 GO:GO:0090398
EMBL:CH473947 GO:GO:0030915 PANTHER:PTHR19306:SF2 CTD:79677
OMA:LHYKELK OrthoDB:EOG44QT04 GeneTree:ENSGT00550000074816
IPI:IPI00360352 RefSeq:NP_001101484.1 UniGene:Rn.7047
Ensembl:ENSRNOT00000007073 GeneID:313961 KEGG:rno:313961
NextBio:667052 Uniprot:D4AB26
Length = 1097
Score = 215 (80.7 bits), Expect = 1.2e-28, Sum P(3) = 1.2e-28
Identities = 96/388 (24%), Positives = 170/388 (43%)
Query: 659 KEREEIINIVQIEKRKRREMENHINLRK-RKLESIEKEDDINTALA-------KLVDQAA 710
K EE++ Q+ K +M+ N+ + R+LE+IE+ ++ A K+ Q
Sbjct: 703 KRNEELLKRCQLHY-KEIKMKIRKNISEIRELENIEEHQSVDIATLEDEAEENKIKMQMV 761
Query: 711 DLNIQQFKYAIE-IKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHE-KLALQA 768
+ N++Q K +E +K L +E + K+ + + + A + E NL E +
Sbjct: 762 EKNMEQQKENMENLKTLKIEAEN-KYDTIKLKINQLSELADPLKDELNLADSEVDSQKRG 820
Query: 769 SLHYEDCKKE-----------VEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEEL 817
HYED +KE ++ K L + QA I E++K + I L
Sbjct: 821 KQHYEDKQKEHMDTLNKKRRELDMKEKELQEKMSQARQICPERIEVKKSASILDKEINRL 880
Query: 818 EAAIQ-DNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEK 876
IQ ++ S + + I+++Y+ + DL +K ++ +K L EI + K
Sbjct: 881 RQKIQAEHASHGD-----REEIMKQYQEARETYLDLDSKVRTLRRFIK-LLEEIMTHRYK 934
Query: 877 WLPTLRN-LVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVLS 935
R L + F + A G+++ D H+++ + I V+ + +
Sbjct: 935 TYQQFRRCLTLRCKLYFDNLLSQRAYCGKMNFD-HKNET----LSISVQPGEGNKASFND 989
Query: 936 AHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTP 995
SGGERS ST+ +++SL + PFR +DE + MD +N R +++ A
Sbjct: 990 MRALSGGERSFSTVCFILSLWSIAESPFRCLDEFDVYMDMVNRRIAMDMILKMADSQRFR 1049
Query: 996 QCFLLTPKLLPDLEYSEACSILNIMNGP 1023
Q LLTP+ + L S+ IL M+ P
Sbjct: 1050 QFILLTPQSMSSLPSSKLIRILR-MSDP 1076
Score = 198 (74.8 bits), Expect = 1.2e-28, Sum P(3) = 1.2e-28
Identities = 71/240 (29%), Positives = 120/240 (50%)
Query: 23 IIE-IELHNFMTFDHL-ICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI 80
IIE I+L NFM L K GS +N V+G NGSGKS+++ A+ + LGG R +S+
Sbjct: 53 IIESIQLRNFMCHSMLGPFKFGSNVNFVVGNNGSGKSAVLTALIVGLGGKAVATNRGSSL 112
Query: 81 GAYVKRGEESGYIKISLR------------GDT--KEEHLTIMRKIDTRNKSEWFFNGKV 126
+VK G+ S I I+LR GD+ ++H+++ + KSE G V
Sbjct: 113 KGFVKAGQNSADISITLRNRGDDAFRANVYGDSIVVQQHISVDGSRSYKLKSE---KGTV 169
Query: 127 VP--KGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKL-SPVKLLEETEKAVGDPQLPVQH 183
V K E++ I FNIQV+N L Q+ +F + + + KA Q+ +
Sbjct: 170 VSTRKEELIAILDHFNIQVDNPVSVLTQEMSKQFLQSKNEGDKYKFFMKATQLEQMKEDY 229
Query: 184 CALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPW 243
++E +K +T E + + + L +LK +E+E+ + + + + +E +K ++ W
Sbjct: 230 SYIME--TKERTKE-QINQGEERLTELKRQCLEKEERFQNIAGLSTMKTNLEYLKHEMAW 286
Score = 95 (38.5 bits), Expect = 2.1e-15, Sum P(4) = 2.1e-15
Identities = 37/157 (23%), Positives = 78/157 (49%)
Query: 722 EIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYEDCK----K 777
EI +L EI + K H+ +++ ++ LE ++K++E+L + LHY++ K K
Sbjct: 673 EISDLETEIENKKG-----HIMNLQH--RLSALEKDIKRNEELLKRCQLHYKEIKMKIRK 725
Query: 778 EVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQN 837
+ R+ + + Q+ IA + E E+ ++M + +E ++N+ ++ +N
Sbjct: 726 NISEIRELENIEEHQSVDIATLEDEAEENKIKMQMVEKNMEQQ-KENMENLKTLKIEAEN 784
Query: 838 ILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALK 874
+Y+ + +I LS + K EL +E+D+ K
Sbjct: 785 ---KYDTIKLKINQLSELADPLKDELNLADSEVDSQK 818
Score = 89 (36.4 bits), Expect = 8.4e-15, Sum P(4) = 8.4e-15
Identities = 44/179 (24%), Positives = 83/179 (46%)
Query: 653 EAAKLQKEREEI-INIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAAD 711
+ A L+ E EE I + +EK ++ EN NL+ K+E+ K D I + +L + A
Sbjct: 743 DIATLEDEAEENKIKMQMVEKNMEQQKENMENLKTLKIEAENKYDTIKLKINQLSELADP 802
Query: 712 LNIQQFKYAIEIKNLLVEIVSC-KWSYAEKHMASIE-FDAKIRELEFNLKQ-HEKLALQA 768
L K + + + V+ K Y +K ++ + K REL+ K+ EK++
Sbjct: 803 L-----KDELNLADSEVDSQKRGKQHYEDKQKEHMDTLNKKRRELDMKEKELQEKMSQAR 857
Query: 769 SLHYE--DCKKEVEHCRKHLSDAKR--QAESIAF-ITPELEKEFLEMPTTIEELEAAIQ 822
+ E + KK K ++ ++ QAE + E+ K++ E T +L++ ++
Sbjct: 858 QICPERIEVKKSASILDKEINRLRQKIQAEHASHGDREEIMKQYQEARETYLDLDSKVR 916
Score = 68 (29.0 bits), Expect = 3.5e-13, Sum P(2) = 3.5e-13
Identities = 38/167 (22%), Positives = 70/167 (41%)
Query: 746 EFDAKIRELEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEK 805
E + ++ + N+K E+ A + E+ + + K D + + E I+ T
Sbjct: 291 EIEKQLNAIRDNIKIGEERAAKLDRKMEEQQVRLNDAEKKYKDIQDKLEKISEETNARAP 350
Query: 806 EFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDL--STKQEADKKEL 863
E + + T + A D N + + ++ E ++IE+L ST Q + + L
Sbjct: 351 ECMALKTDVIARTRAFNDAEVLYNRSLNEYKALKKDGEQLCKRIEELKKSTDQSLEPERL 410
Query: 864 KRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEH 910
+R I LKEK ++ L Q N T ++ ++ A E EH
Sbjct: 411 ER-QKRICWLKEK----VKALQDQEN-TVNQEVEQFEQAIEKDKQEH 451
Score = 68 (29.0 bits), Expect = 3.5e-13, Sum P(2) = 3.5e-13
Identities = 48/243 (19%), Positives = 110/243 (45%)
Query: 643 MQTEQRLIEDEAA-----KLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKE-D 696
M+T ++ E A +++K+ I + ++I + + +++ + ++ +L EK+
Sbjct: 273 MKTNLEYLKHEMAWAVVNEIEKQLNAIRDNIKIGEERAAKLDRKMEEQQVRLNDAEKKYK 332
Query: 697 DINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEF 756
DI L K+ ++ N + A E L ++++ ++ + A + ++ + E +
Sbjct: 333 DIQDKLEKISEET---NAR----APECMALKTDVIARTRAFND---AEVLYNRSLNEYKA 382
Query: 757 NLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTI-- 814
K E+L + E+ KK + + +RQ + I ++ ++ K + T+
Sbjct: 383 LKKDGEQLCKRI----EELKKSTDQSLEP-ERLERQ-KRICWLKEKV-KALQDQENTVNQ 435
Query: 815 --EELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDA 872
E+ E AI+ + + I + + + QRQ+++L + D+ LKRF + A
Sbjct: 436 EVEQFEQAIEKDKQEHVRIKREDVEVRHTLSYNQRQLKELKDSK-TDR--LKRFGPHVPA 492
Query: 873 LKE 875
L E
Sbjct: 493 LLE 495
Score = 51 (23.0 bits), Expect = 1.5e-13, Sum P(3) = 1.5e-13
Identities = 21/90 (23%), Positives = 41/90 (45%)
Query: 165 KLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQE---KDV 221
K+ EET P+ ++ ++ E R+ LN+ KAL + E K +
Sbjct: 340 KISEETNARA--PECMALKTDVIARTRAFNDAEVLYNRS---LNEYKALKKDGEQLCKRI 394
Query: 222 ERVRQRAELLEKVESMK--KKLPWLKYDMK 249
E +++ + + E ++ K++ WLK +K
Sbjct: 395 EELKKSTDQSLEPERLERQKRICWLKEKVK 424
Score = 50 (22.7 bits), Expect = 1.2e-28, Sum P(3) = 1.2e-28
Identities = 16/51 (31%), Positives = 27/51 (52%)
Query: 386 QKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAENIFE 436
Q RL EK+ + +N+ L++C K+++ K K + +R ENI E
Sbjct: 692 QHRLSALEKD--IKRNEELLKRCQLHYKEIKMKIRKNISEIRE--LENIEE 738
Score = 50 (22.7 bits), Expect = 3.9e-13, Sum P(2) = 3.9e-13
Identities = 17/81 (20%), Positives = 41/81 (50%)
Query: 163 PVKLLEETEKAVGDPQLPVQHCA--LVEKSSKLKTIECTVKRNGDTLN--QL--KALNVE 216
P L + + + D + +++ ++ +L +E +KRN + L QL K + ++
Sbjct: 663 PKFLSRDVDSEISDLETEIENKKGHIMNLQHRLSALEKDIKRNEELLKRCQLHYKEIKMK 722
Query: 217 QEKDVERVRQRAELLEKVESM 237
K++ +R+ E +E+ +S+
Sbjct: 723 IRKNISEIRE-LENIEEHQSV 742
Score = 49 (22.3 bits), Expect = 1.1e-27, Sum P(4) = 1.1e-27
Identities = 12/55 (21%), Positives = 31/55 (56%)
Query: 368 DKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKL 422
++IEK + I + ++ ++R K +++ + + ++ L + KD++DK K+
Sbjct: 290 NEIEKQLNAIRD-NIKIGEERAAKLDRK--MEEQQVRLNDAEKKYKDIQDKLEKI 341
Score = 45 (20.9 bits), Expect = 8.3e-11, Sum P(2) = 8.3e-11
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 385 NQKRLQKSEKEKILNQNKLTLRQ-CSDRLK 413
N+KR + KEK L + RQ C +R++
Sbjct: 836 NKKRRELDMKEKELQEKMSQARQICPERIE 865
Score = 42 (19.8 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 23/97 (23%), Positives = 52/97 (53%)
Query: 369 KIEKLGSQILEL-GVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALR 427
KI K S+I EL ++ +Q + + E +NK+ + Q ++ + + +N + L L+
Sbjct: 722 KIRKNISEIRELENIEEHQS-VDIATLEDEAEENKIKM-QMVEKNMEQQKENMENLKTLK 779
Query: 428 NSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSN 464
AEN ++ ++ ++L++ A P+ E+N+++
Sbjct: 780 IE-AENKYDT---IKLKINQLSELA-DPLKDELNLAD 811
Score = 37 (18.1 bits), Expect = 1.1e-27, Sum P(4) = 1.1e-27
Identities = 6/18 (33%), Positives = 12/18 (66%)
Query: 590 ISRYGGHVSASVEPVNQS 607
+ R+G HV A +E ++ +
Sbjct: 483 LKRFGPHVPALLEAIDDA 500
>UNIPROTKB|E1BFH7 [details] [associations]
symbol:SMC6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090398 "cellular senescence" evidence=IEA] [GO:0030915
"Smc5-Smc6 complex" evidence=IEA] [GO:0016605 "PML body"
evidence=IEA] [GO:0000781 "chromosome, telomeric region"
evidence=IEA] [GO:0000722 "telomere maintenance via recombination"
evidence=IEA] [GO:0000724 "double-strand break repair via
homologous recombination" evidence=IEA] InterPro:IPR027132
GO:GO:0016605 GO:GO:0000781 GO:GO:0000722 GO:GO:0090398
GO:GO:0030915 PANTHER:PTHR19306:SF2 OMA:LHYKELK
GeneTree:ENSGT00550000074816 EMBL:DAAA02031803 IPI:IPI00699225
PRIDE:E1BFH7 Ensembl:ENSBTAT00000024303 Uniprot:E1BFH7
Length = 1101
Score = 229 (85.7 bits), Expect = 9.3e-28, Sum P(4) = 9.3e-28
Identities = 94/397 (23%), Positives = 185/397 (46%)
Query: 650 IEDEAAKLQKE---REEIINIVQIEKRKRREMENHINLRK-RKLESIEKEDDINTALAKL 705
++ + LQK+ EE++ Q+ ++ ++M+ ++ + R+LE+IE+ ++ +A L
Sbjct: 694 LQQHLSTLQKDIKCNEELLRRYQLHYKELKKMKIRKSISEIRELENIEEHQSVD--IATL 751
Query: 706 VDQA---------ADLNIQQFKYAIE-IKNLLVEIVSCKWSYAEKHMASIEFDAKIRELE 755
D+A + N++Q K +E +K+L VE + K+ ++ + + A + E
Sbjct: 752 EDEAQENKIKMKMVEKNMEQQKENMEHLKSLKVEAEN-KYDEIKQKINQLSELADPLKDE 810
Query: 756 FNLKQHE-KLALQASLHYEDCKKE----VEHCRKHLSDAKRQAESIAFITPELEKEFLEM 810
NL E + HYED +KE + ++ L +++ E ++ E +E+
Sbjct: 811 LNLADSEVDNQKRGKRHYEDKQKEHLDTLNKKKRELDMKEKELEEKMSQARQICPERIEV 870
Query: 811 PTTIEELEAAI---QDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFL 867
+ L+ I + I ++ + + I+++Y+ + DL +K + K+ +K L
Sbjct: 871 KKSASILDKEINRLRQKIQAEHASYGDREEIMKQYQEARESYLDLDSKVKTLKRFIK-LL 929
Query: 868 AEIDALKEKWLPTLRN-LVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFR 926
EI + K R L + F + A G+++ D H+++ + I V+
Sbjct: 930 EEIMIHRYKTYQQFRRCLTLRCKLYFDNLLSQRAYCGKMNFD-HKNET----LTISVQPG 984
Query: 927 QSGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLV 986
+ + SGGERS ST+ +++SL + PFR +DE + MD +N R ++
Sbjct: 985 EGNKAAFNDMRALSGGERSFSTVCFILSLWSIAESPFRCLDEFDVYMDMVNRRIAMDMIL 1044
Query: 987 RAASQPNTPQCFLLTPKLLPDLEYSEACSILNIMNGP 1023
+ A Q LLTP+ + L S+ IL M+ P
Sbjct: 1045 KMADSQRFRQFILLTPQSMSSLPSSKLIRILR-MSDP 1080
Score = 187 (70.9 bits), Expect = 9.3e-28, Sum P(4) = 9.3e-28
Identities = 67/239 (28%), Positives = 118/239 (49%)
Query: 23 IIE-IELHNFMTFDHL-ICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI 80
IIE I+L NFM L K GS +N V+G NGSGKS+++ A+ + LGG R +S+
Sbjct: 54 IIESIQLKNFMCHSMLGPFKFGSNVNFVVGNNGSGKSAVLTALIVGLGGKAITTNRGSSL 113
Query: 81 GAYVKRGEESGYIKISLR------------GDT--KEEHLTIMRKIDTRNKSEWFFNGKV 126
+VK G+ S I I++R GDT ++H+++ + KS +
Sbjct: 114 KGFVKDGQNSADISITIRNRGDDAYRGNVYGDTIIVQQHISMDGSRSYKLKSATELGAVI 173
Query: 127 -VPKGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKL-SPVKLLEETEKAVGDPQLPVQHC 184
K E++ I FNIQV+N L Q+ +F + + + KA Q+ +
Sbjct: 174 STKKEELIGILDHFNIQVDNPVSVLTQEMSKQFLQSKNEGDKYKFFMKATQLEQMKEDYS 233
Query: 185 ALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPW 243
++E +K +T E + + + L++LK +E+E+ + + + + +E +K ++ W
Sbjct: 234 YIME--TKERTKE-QINQGEERLSELKRQCLEKEERFQNIAGLSTMKTNLEYLKHEMAW 289
Score = 111 (44.1 bits), Expect = 1.8e-16, Sum P(2) = 1.8e-16
Identities = 79/357 (22%), Positives = 154/357 (43%)
Query: 644 QTEQRLIEDEAAKLQKEREEIINIVQIEKRKRR-EMENH------INLRKRKLESIEK-- 694
Q E+RL E + L+KE E NI + K E H +N +++L +I
Sbjct: 248 QGEERLSELKRQCLEKE-ERFQNIAGLSTMKTNLEYLKHEMAWAVVNEIEKQLNAIRDNI 306
Query: 695 ---EDDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKI 751
ED K +Q LN + KY +I++ L E +S + S +++ D
Sbjct: 307 KIGEDRAARLERKTEEQQVRLNEAEKKYK-DIQDKL-EKISQETSARAPECMALKADLTS 364
Query: 752 RELEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPE-LEKEFLEM 810
++ +N + E L ++ Y+ KK+ E + + + K+ A+ + PE LE++ +
Sbjct: 365 KKRAYN--EAEVLYNRSLNEYKALKKDDEQLCRRIEELKKSADQS--LEPERLERQ--KK 418
Query: 811 PTTIEELEAAIQDNISQANSIFFLNQNILQE--YEHRQRQIEDLSTKQEAD--KKELKRF 866
+ ++E A+QD S N Q +++ EH + + E+L K + +++LK
Sbjct: 419 ISWLKERIKALQDQESSVNQEIEQFQQAIEKDKEEHTRIKREELDVKTTLNFNQRQLKEL 478
Query: 867 L-AEIDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKF 925
++ D LK ++ P + L+ I++ + R G + H D + + + ++
Sbjct: 479 KDSKTDRLK-RFGPHVPALLEAIDDAYRRGHFTYKPVGPLGACIHLRDPE---LALAIES 534
Query: 926 RQSGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMF 982
G L+ H+ + ER + ++ T+ P +V E M + R +
Sbjct: 535 CLKGLLQAYCCHNHAD-ERVLQALMKKFYSPG-TSRPQIIVSEFRNEMYDVRHRAAY 589
Score = 81 (33.6 bits), Expect = 1.6e-12, Sum P(4) = 1.6e-12
Identities = 32/151 (21%), Positives = 68/151 (45%)
Query: 729 EIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYEDCKK-----EVEHCR 783
EI + K + + L+ ++K +E+L + LHY++ KK + R
Sbjct: 676 EISDLEDEVENKKAQILNLQQHLSTLQKDIKCNEELLRRYQLHYKELKKMKIRKSISEIR 735
Query: 784 KHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYE 843
+ + + Q+ IA + E ++ ++M + +E ++N+ S+ +N +Y+
Sbjct: 736 ELENIEEHQSVDIATLEDEAQENKIKMKMVEKNMEQQ-KENMEHLKSLKVEAEN---KYD 791
Query: 844 HRQRQIEDLSTKQEADKKELKRFLAEIDALK 874
+++I LS + K EL +E+D K
Sbjct: 792 EIKQKINQLSELADPLKDELNLADSEVDNQK 822
Score = 65 (27.9 bits), Expect = 6.0e-11, Sum P(4) = 6.0e-11
Identities = 39/205 (19%), Positives = 91/205 (44%)
Query: 737 YAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESI 796
Y S + D++I +LE ++ + L H +K+++ C + L + Q
Sbjct: 663 YTRPKFLSRDVDSEISDLEDEVENKKAQILNLQQHLSTLQKDIK-CNEELL-RRYQLHYK 720
Query: 797 AFITPELEKEFLEMPT--TIEE---LEAAIQDNISQANSIFFLNQNILQEYEHRQRQIED 851
++ K E+ IEE ++ A ++ +Q N I + + + E ++ +E
Sbjct: 721 ELKKMKIRKSISEIRELENIEEHQSVDIATLEDEAQENKIKM--KMVEKNMEQQKENMEH 778
Query: 852 L-STKQEADKK--ELKRFLAEIDALKEKWLPTLRNLVAQIN--ETFSRNFQEMAVAGEVS 906
L S K EA+ K E+K+ + ++ L + L ++++ + R++++ +
Sbjct: 779 LKSLKVEAENKYDEIKQKINQLSELADPLKDELNLADSEVDNQKRGKRHYEDKQKEHLDT 838
Query: 907 LDEHESDFDKFGILIKVKFRQSGQL 931
L++ + + D ++ K Q+ Q+
Sbjct: 839 LNKKKRELDMKEKELEEKMSQARQI 863
Score = 58 (25.5 bits), Expect = 2.1e-14, Sum P(3) = 2.1e-14
Identities = 23/90 (25%), Positives = 40/90 (44%)
Query: 165 KLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQE---KDV 221
K+ +ET P+ L K E R+ LN+ KAL + E + +
Sbjct: 343 KISQETSARA--PECMALKADLTSKKRAYNEAEVLYNRS---LNEYKALKKDDEQLCRRI 397
Query: 222 ERVRQRAELLEKVESMK--KKLPWLKYDMK 249
E +++ A+ + E ++ KK+ WLK +K
Sbjct: 398 EELKKSADQSLEPERLERQKKISWLKERIK 427
Score = 50 (22.7 bits), Expect = 3.8e-10, Sum P(2) = 3.8e-10
Identities = 23/97 (23%), Positives = 53/97 (54%)
Query: 369 KIEKLGSQILEL-GVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALR 427
KI K S+I EL ++ +Q + + E +NK+ ++ ++ ++ N + L +L+
Sbjct: 726 KIRKSISEIRELENIEEHQS-VDIATLEDEAQENKIKMKMVEKNMEQQKE-NMEHLKSLK 783
Query: 428 NSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSN 464
AEN ++ ++Q ++L++ A P+ E+N+++
Sbjct: 784 VE-AENKYDE---IKQKINQLSELA-DPLKDELNLAD 815
Score = 46 (21.3 bits), Expect = 9.3e-28, Sum P(4) = 9.3e-28
Identities = 12/55 (21%), Positives = 30/55 (54%)
Query: 368 DKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKL 422
++IEK + I + ++ + R + E++ + ++ L + + KD++DK K+
Sbjct: 293 NEIEKQLNAIRD-NIKIGEDRAARLERKT--EEQQVRLNEAEKKYKDIQDKLEKI 344
Score = 41 (19.5 bits), Expect = 3.0e-27, Sum P(4) = 3.0e-27
Identities = 11/75 (14%), Positives = 34/75 (45%)
Query: 363 YEPPHDKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKL 422
Y+ DK+EK+ + + + + K++ N+ ++ + + K ++ + +L
Sbjct: 334 YKDIQDKLEKISQETSARAPECMALKADLTSKKRAYNEAEVLYNRSLNEYKALKKDDEQL 393
Query: 423 ---LHALRNSGAENI 434
+ L+ S +++
Sbjct: 394 CRRIEELKKSADQSL 408
Score = 37 (18.1 bits), Expect = 9.3e-28, Sum P(4) = 9.3e-28
Identities = 6/18 (33%), Positives = 12/18 (66%)
Query: 590 ISRYGGHVSASVEPVNQS 607
+ R+G HV A +E ++ +
Sbjct: 486 LKRFGPHVPALLEAIDDA 503
>MGI|MGI:1914491 [details] [associations]
symbol:Smc6 "structural maintenance of chromosomes 6"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000722 "telomere maintenance via recombination"
evidence=ISO] [GO:0000781 "chromosome, telomeric region"
evidence=ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] [GO:0016605 "PML body" evidence=ISO] [GO:0030915
"Smc5-Smc6 complex" evidence=ISO] [GO:0090398 "cellular senescence"
evidence=ISO] InterPro:IPR027132 InterPro:IPR003395 Pfam:PF02463
MGI:MGI:1914491 GO:GO:0005524 GO:GO:0016605 GO:GO:0006281
HSSP:P58301 GO:GO:0000781 GO:GO:0000722 GO:GO:0090398
eggNOG:COG1196 GO:GO:0030915 PANTHER:PTHR19306:SF2 CTD:79677
HOVERGEN:HBG093964 OMA:LHYKELK OrthoDB:EOG44QT04 EMBL:AJ310552
EMBL:AK003872 EMBL:AK009009 EMBL:AK011982 EMBL:AK012626
EMBL:AK014442 EMBL:AK050341 EMBL:AK088002 EMBL:AK135873
EMBL:AK148478 EMBL:BC026429 EMBL:BC048790 EMBL:BC090630
EMBL:BC099955 EMBL:AK220488 IPI:IPI00165850 IPI:IPI00816943
RefSeq:NP_079971.2 UniGene:Mm.173953 ProteinModelPortal:Q924W5
SMR:Q924W5 IntAct:Q924W5 STRING:Q924W5 PhosphoSite:Q924W5
PaxDb:Q924W5 PRIDE:Q924W5 Ensembl:ENSMUST00000020931 GeneID:67241
KEGG:mmu:67241 UCSC:uc007nax.1 UCSC:uc007nay.1
GeneTree:ENSGT00550000074816 InParanoid:Q924W5 NextBio:323984
Bgee:Q924W5 CleanEx:MM_SMC6 Genevestigator:Q924W5 Uniprot:Q924W5
Length = 1097
Score = 215 (80.7 bits), Expect = 1.1e-27, Sum P(4) = 1.1e-27
Identities = 101/401 (25%), Positives = 176/401 (43%)
Query: 646 EQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRK-RKLESIEKEDDINTALA- 703
+QRL E K K EE++ Q+ K +M+ N+ + R+LE+IE+ ++ A
Sbjct: 692 QQRLSALE--KDIKRNEELLKRCQLHY-KEIKMKIRKNISEIRELENIEEHQSVDIATLE 748
Query: 704 ------KLVDQAADLNIQQFKYAIE-IKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEF 756
K+ Q + N++Q K +E +K+L +E + K+ + + + A + E
Sbjct: 749 DEAEENKIKMQMVEKNMEQQKENMENLKSLKIEAEN-KYDTIKLKINQLSELADPLKDEL 807
Query: 757 NLKQHE-KLALQASLHYEDCKKE-----------VEHCRKHLSDAKRQAESIAFITPELE 804
NL E + HYED +KE ++ K L + QA I E++
Sbjct: 808 NLADSEVDSQKRGKQHYEDKQKEHLDTLNKKRRELDMKEKELQEKMSQARQICPERIEVK 867
Query: 805 KEFLEMPTTIEELEAAIQ-DNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKEL 863
K + I L IQ ++ S + + I+++Y+ + DL K ++ +
Sbjct: 868 KSASILDKEINRLRQKIQAEHASHGD-----REEIMKQYQEARETYLDLDNKVRTLRRFI 922
Query: 864 KRFLAEIDALKEKWLPTLRN-LVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIK 922
K L EI + K R L + F + A G+++ D H+++ + I
Sbjct: 923 K-LLEEIMTHRYKTYQQFRRCLTLRCKLYFDNLLSQRAYCGKMNFD-HKNET----LSIT 976
Query: 923 VKFRQSGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMF 982
V+ + + SGGERS ST+ +++SL + PFR +DE + MD +N R
Sbjct: 977 VQPGEGNKASFNDMRALSGGERSFSTVCFILSLWSIAESPFRCLDEFDVYMDMVNRRIAM 1036
Query: 983 QQLVRAASQPNTPQCFLLTPKLLPDLEYSEACSILNIMNGP 1023
+++ A Q LLTP+ + L S+ IL M+ P
Sbjct: 1037 DMILKMADSQRFRQFILLTPQSMSSLPSSKLIRILR-MSDP 1076
Score = 198 (74.8 bits), Expect = 1.1e-27, Sum P(4) = 1.1e-27
Identities = 71/240 (29%), Positives = 120/240 (50%)
Query: 23 IIE-IELHNFMTFDHL-ICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI 80
IIE I+L NFM L K GS +N V+G NGSGKS+++ A+ + LGG R +S+
Sbjct: 53 IIESIQLRNFMCHSMLGPFKFGSNVNFVVGNNGSGKSAVLTALIVGLGGKAVATNRGSSL 112
Query: 81 GAYVKRGEESGYIKISLR------------GDT--KEEHLTIMRKIDTRNKSEWFFNGKV 126
+VK G+ S I I+LR GD+ ++H+++ + KSE G V
Sbjct: 113 KGFVKAGQNSADISITLRNRGDDAFRANVYGDSIVVQQHISVDGSRSYKLKSE---KGTV 169
Query: 127 VP--KGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKL-SPVKLLEETEKAVGDPQLPVQH 183
V K E++ I FNIQV+N L Q+ +F + + + KA Q+ +
Sbjct: 170 VSTRKEELIAILDHFNIQVDNPVSVLTQEMSKQFLQSKNEGDKYKFFMKATQLEQMKEDY 229
Query: 184 CALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPW 243
++E +K +T E + + + L +LK +E+E+ + + + + +E +K ++ W
Sbjct: 230 SYIME--TKERTKE-QINQGEERLTELKRQCLEKEERFQNIAGLSTMKTNLEYLKHEMAW 286
Score = 98 (39.6 bits), Expect = 1.1e-15, Sum P(4) = 1.1e-15
Identities = 38/157 (24%), Positives = 78/157 (49%)
Query: 722 EIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYEDCK----K 777
EI +L EI + K H+ +++ ++ LE ++K++E+L + LHY++ K K
Sbjct: 673 EISDLETEIENKKG-----HIITLQ--QRLSALEKDIKRNEELLKRCQLHYKEIKMKIRK 725
Query: 778 EVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQN 837
+ R+ + + Q+ IA + E E+ ++M + +E ++N+ S+ +N
Sbjct: 726 NISEIRELENIEEHQSVDIATLEDEAEENKIKMQMVEKNMEQQ-KENMENLKSLKIEAEN 784
Query: 838 ILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALK 874
+Y+ + +I LS + K EL +E+D+ K
Sbjct: 785 ---KYDTIKLKINQLSELADPLKDELNLADSEVDSQK 818
Score = 70 (29.7 bits), Expect = 6.7e-13, Sum P(4) = 6.7e-13
Identities = 45/212 (21%), Positives = 95/212 (44%)
Query: 677 EMEN---HINLRKRKLESIEKEDDINTALAKLVD-QAADLNIQQFKYAIEIKNL------ 726
E+EN HI +++L ++EK+ N L K ++ ++ K EI+ L
Sbjct: 680 EIENKKGHIITLQQRLSALEKDIKRNEELLKRCQLHYKEIKMKIRKNISEIRELENIEEH 739
Query: 727 -LVEIVSCKWSYAEKHMASIEFDAK-IRELEFNLKQHEKLALQASLHYEDCKKEVEHCRK 784
V+I + + AE++ ++ K + + + N++ + L ++A Y+ K ++ +
Sbjct: 740 QSVDIATLE-DEAEENKIKMQMVEKNMEQQKENMENLKSLKIEAENKYDTIKLKINQLSE 798
Query: 785 HLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEH 844
L+D + ++A + +K + E+ + D +++ + + LQE
Sbjct: 799 -LADPLKDELNLADSEVDSQKRGKQH---YEDKQKEHLDTLNKKRRELDMKEKELQEKMS 854
Query: 845 RQRQI--EDLSTKQEAD--KKELKRFLAEIDA 872
+ RQI E + K+ A KE+ R +I A
Sbjct: 855 QARQICPERIEVKKSASILDKEINRLRQKIQA 886
Score = 67 (28.6 bits), Expect = 4.4e-13, Sum P(2) = 4.4e-13
Identities = 38/167 (22%), Positives = 71/167 (42%)
Query: 746 EFDAKIRELEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEK 805
E + ++ + N+K E+ A + E+ + + K D + + E I+ T
Sbjct: 291 EIEKQLNAIRDNIKIGEERAAKLDRKMEEQQVRLNDAEKKYKDIQDKLEKISEETNARAP 350
Query: 806 EFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDL--STKQEADKKEL 863
E + + T + A D N + + ++ E ++IE+L ST Q + + L
Sbjct: 351 ECMALKTDVIARTRAFNDAEVLYNRSLNEYKALKKDGEQLCKRIEELKKSTDQSLEPERL 410
Query: 864 KRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEH 910
+R I LKEK + L++ +N+ + F E A+ E EH
Sbjct: 411 ER-QKRICWLKEK-VKALQDQEHTVNQE-AEQF-EQAI--EKDKQEH 451
Score = 67 (28.6 bits), Expect = 4.4e-13, Sum P(2) = 4.4e-13
Identities = 47/243 (19%), Positives = 110/243 (45%)
Query: 643 MQTEQRLIEDEAA-----KLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKE-D 696
M+T ++ E A +++K+ I + ++I + + +++ + ++ +L EK+
Sbjct: 273 MKTNLEYLKHEMAWAVVNEIEKQLNAIRDNIKIGEERAAKLDRKMEEQQVRLNDAEKKYK 332
Query: 697 DINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEF 756
DI L K+ ++ N + A E L ++++ ++ + A + ++ + E +
Sbjct: 333 DIQDKLEKISEET---NAR----APECMALKTDVIARTRAFND---AEVLYNRSLNEYKA 382
Query: 757 NLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTI-- 814
K E+L + E+ KK + + +RQ + I ++ ++ K + T+
Sbjct: 383 LKKDGEQLCKRI----EELKKSTDQSLEP-ERLERQ-KRICWLKEKV-KALQDQEHTVNQ 435
Query: 815 --EELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDA 872
E+ E AI+ + + + + + + QRQ+++L + D+ LKRF + A
Sbjct: 436 EAEQFEQAIEKDKQEHGRVRKEDIEVRHALNYNQRQLKELKDSK-TDR--LKRFGPHVPA 492
Query: 873 LKE 875
L E
Sbjct: 493 LLE 495
Score = 52 (23.4 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 16/51 (31%), Positives = 28/51 (54%)
Query: 386 QKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAENIFE 436
Q+RL EK+ + +N+ L++C K+++ K K + +R ENI E
Sbjct: 692 QQRLSALEKD--IKRNEELLKRCQLHYKEIKMKIRKNISEIRE--LENIEE 738
Score = 51 (23.0 bits), Expect = 3.2e-12, Sum P(3) = 3.2e-12
Identities = 21/90 (23%), Positives = 41/90 (45%)
Query: 165 KLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQE---KDV 221
K+ EET P+ ++ ++ E R+ LN+ KAL + E K +
Sbjct: 340 KISEETNARA--PECMALKTDVIARTRAFNDAEVLYNRS---LNEYKALKKDGEQLCKRI 394
Query: 222 ERVRQRAELLEKVESMK--KKLPWLKYDMK 249
E +++ + + E ++ K++ WLK +K
Sbjct: 395 EELKKSTDQSLEPERLERQKRICWLKEKVK 424
Score = 49 (22.3 bits), Expect = 1.1e-27, Sum P(4) = 1.1e-27
Identities = 12/55 (21%), Positives = 31/55 (56%)
Query: 368 DKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKL 422
++IEK + I + ++ ++R K +++ + + ++ L + KD++DK K+
Sbjct: 290 NEIEKQLNAIRD-NIKIGEERAAKLDRK--MEEQQVRLNDAEKKYKDIQDKLEKI 341
Score = 45 (20.9 bits), Expect = 8.3e-11, Sum P(2) = 8.3e-11
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 385 NQKRLQKSEKEKILNQNKLTLRQ-CSDRLK 413
N+KR + KEK L + RQ C +R++
Sbjct: 836 NKKRRELDMKEKELQEKMSQARQICPERIE 865
Score = 43 (20.2 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 23/97 (23%), Positives = 53/97 (54%)
Query: 369 KIEKLGSQILEL-GVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALR 427
KI K S+I EL ++ +Q + + E +NK+ + Q ++ + + +N + L +L+
Sbjct: 722 KIRKNISEIRELENIEEHQS-VDIATLEDEAEENKIKM-QMVEKNMEQQKENMENLKSLK 779
Query: 428 NSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSN 464
AEN ++ ++ ++L++ A P+ E+N+++
Sbjct: 780 IE-AENKYDT---IKLKINQLSELA-DPLKDELNLAD 811
Score = 37 (18.1 bits), Expect = 1.1e-27, Sum P(4) = 1.1e-27
Identities = 6/18 (33%), Positives = 12/18 (66%)
Query: 590 ISRYGGHVSASVEPVNQS 607
+ R+G HV A +E ++ +
Sbjct: 483 LKRFGPHVPALLEAIDDA 500
>UNIPROTKB|F1SCS4 [details] [associations]
symbol:SMC6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090398 "cellular senescence" evidence=IEA] [GO:0030915
"Smc5-Smc6 complex" evidence=IEA] [GO:0016605 "PML body"
evidence=IEA] [GO:0000781 "chromosome, telomeric region"
evidence=IEA] [GO:0000722 "telomere maintenance via recombination"
evidence=IEA] [GO:0000724 "double-strand break repair via
homologous recombination" evidence=IEA] InterPro:IPR027132
InterPro:IPR003395 Pfam:PF02463 GO:GO:0016605 GO:GO:0000781
GO:GO:0000722 GO:GO:0090398 GO:GO:0030915 PANTHER:PTHR19306:SF2
OMA:LHYKELK GeneTree:ENSGT00550000074816 EMBL:CU468500
EMBL:CU856226 Ensembl:ENSSSCT00000009425 Uniprot:F1SCS4
Length = 1098
Score = 216 (81.1 bits), Expect = 3.4e-27, Sum P(3) = 3.4e-27
Identities = 94/388 (24%), Positives = 170/388 (43%)
Query: 659 KEREEIINIVQIEKRKRREMENHINLRK-RKLESIEKEDDINTALA-------KLVDQAA 710
K EE + Q+ ++ ++M+ L + R+LE+IE+ ++ A K+ +
Sbjct: 703 KRNEEFLRRCQLHYKELKKMKIRKCLSEIRELENIEEHQSVDIATLEDEAHENKMKMKTV 762
Query: 711 DLNIQQFKYAIE-IKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHE-KLALQA 768
+ N+++ K +E +K+L +E + K+ + + + A + E NL E +
Sbjct: 763 EKNMEKQKEHMEYLKSLKIEAEN-KYDAIKLKINQLSEQADPLKDELNLADSEVDNQKRG 821
Query: 769 SLHYEDC-----------KKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEEL 817
HYED K+E++ K L + QA I E++K + I L
Sbjct: 822 KRHYEDKQKEHLDTLNKKKRELDMKEKELEEKMSQARQICPERIEVKKSASILDKEINRL 881
Query: 818 EAAIQ-DNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEK 876
IQ ++ S + + I+++Y+ + DL K K+ +K L EI + K
Sbjct: 882 RQKIQAEHASHGD-----REEIMRQYQEAKETYLDLDNKVRTLKRFIK-LLEEIMTHRYK 935
Query: 877 WLPTLRN-LVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVLS 935
R L + F + A G+++ D H+++ + I V+ + +
Sbjct: 936 TYQQFRRCLTLRCKLYFDNLLSQRAYCGKMNFD-HKNET----LTISVQPGEGSKAAFND 990
Query: 936 AHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTP 995
SGGERS ST+ +++SL + PFR +DE + MD +N R +++ A
Sbjct: 991 MRSLSGGERSFSTVCFILSLWSIAESPFRCLDEFDVYMDMVNRRIAMDMILKMADSQRFR 1050
Query: 996 QCFLLTPKLLPDLEYSEACSILNIMNGP 1023
Q LLTP+ + L S+ IL M+ P
Sbjct: 1051 QFILLTPQSMSSLPPSKLIRILR-MSDP 1077
Score = 187 (70.9 bits), Expect = 3.4e-27, Sum P(3) = 3.4e-27
Identities = 68/237 (28%), Positives = 115/237 (48%)
Query: 23 IIE-IELHNFMTFDHL-ICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI 80
IIE I+L NFM L K GS +N V+G NGSGKS+++ A+ + LGG R +S+
Sbjct: 53 IIESIQLKNFMCHSMLGPFKFGSNVNFVVGNNGSGKSAVLTALIVGLGGKAIATNRGSSL 112
Query: 81 GAYVKRGEESGYIKISLR--GDTKE------EHLTIMRKIDTRNKSEWFFN---GKVVP- 128
+VK G+ S I I+LR GD + + + + I + G VV
Sbjct: 113 KGFVKDGQNSADISITLRNRGDDAYRANVYGDSIIVQQHISMDGSRSYKLRSQTGAVVST 172
Query: 129 -KGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKL-SPVKLLEETEKAVGDPQLPVQHCAL 186
K E++ I FNIQV+N L Q+ +F + + + KA Q+ + +
Sbjct: 173 KKEELIGILDHFNIQVDNPVSVLTQEMSKQFLQSKNEGDKYKFFMKATQLEQMKEDYSYI 232
Query: 187 VEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPW 243
+E +K +T E + + + L +LK +E+E+ + + + + +E +K ++ W
Sbjct: 233 ME--TKERTKE-QINQGEERLTELKRQCLEKEERFQSIAGLSTMKTNLEDLKHEMAW 286
Score = 88 (36.0 bits), Expect = 6.4e-14, Sum P(3) = 6.4e-14
Identities = 29/126 (23%), Positives = 63/126 (50%)
Query: 754 LEFNLKQHEKLALQASLHYEDCKK-EVEHCRKHLSDAKR----QAESIAFITPELEKEFL 808
LE ++K++E+ + LHY++ KK ++ C + + + Q+ IA + E + +
Sbjct: 698 LEKDIKRNEEFLRRCQLHYKELKKMKIRKCLSEIRELENIEEHQSVDIATLEDEAHENKM 757
Query: 809 EMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLA 868
+M T + +E ++++ S+ +N +Y+ + +I LS + + K EL +
Sbjct: 758 KMKTVEKNMEKQ-KEHMEYLKSLKIEAEN---KYDAIKLKINQLSEQADPLKDELNLADS 813
Query: 869 EIDALK 874
E+D K
Sbjct: 814 EVDNQK 819
Score = 76 (31.8 bits), Expect = 5.2e-13, Sum P(3) = 5.2e-13
Identities = 46/224 (20%), Positives = 101/224 (45%)
Query: 656 KLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKE-DDINTALAKLVDQAADLNI 714
+++K+ I + ++I + + +E ++ +L EK+ DI L K+ + + N
Sbjct: 291 EIEKQLNAIRDNIKIGEDRAARLERKTEEQQVRLNEAEKKYKDIQDKLEKI---SQETNA 347
Query: 715 QQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYED 774
+ A E L ++ S K Y E A + ++ + E K E+L + E+
Sbjct: 348 R----APECLALKADLTSKKRVYNE---AEVLYNRSLNEYRALKKDDEQLCKRI----EE 396
Query: 775 CKKEVEHCRKHLSDAKRQAESIAFITPE---LEKEFLEMPTTIEELEAAIQDNISQANSI 831
+K + + +RQ + I+++ L+ + + + IE+ + A++ + + I
Sbjct: 397 LRKSADQSMEP-ERLERQ-KKISWLKERVKALQDQEISVNQEIEQFQQAVEKDKEEHTRI 454
Query: 832 FFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKE 875
++ Q + Q+Q+++L + D+ LKRF + AL E
Sbjct: 455 KREELDVKQILNYNQKQLKELKDSK-TDR--LKRFGPNVPALLE 495
Score = 74 (31.1 bits), Expect = 1.7e-12, Sum P(3) = 1.7e-12
Identities = 40/178 (22%), Positives = 79/178 (44%)
Query: 653 EAAKLQKE-REEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAAD 711
+ A L+ E E + + +EK ++ E+ L+ K+E+ K D I + +L +QA
Sbjct: 744 DIATLEDEAHENKMKMKTVEKNMEKQKEHMEYLKSLKIEAENKYDAIKLKINQLSEQADP 803
Query: 712 LNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIE-FDAKIRELEFNLKQ-HEKLALQAS 769
L + E+ N K Y +K ++ + K REL+ K+ EK++
Sbjct: 804 LKDELNLADSEVDNQK----RGKRHYEDKQKEHLDTLNKKKRELDMKEKELEEKMSQARQ 859
Query: 770 LHYE--DCKKEVEHCRKHLSDAKR--QAESIAF-ITPELEKEFLEMPTTIEELEAAIQ 822
+ E + KK K ++ ++ QAE + E+ +++ E T +L+ ++
Sbjct: 860 ICPERIEVKKSASILDKEINRLRQKIQAEHASHGDREEIMRQYQEAKETYLDLDNKVR 917
Score = 63 (27.2 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 35/160 (21%), Positives = 69/160 (43%)
Query: 168 EETEKAVGDPQLPVQHC-AL-VEKSSKLKTI-ECTVKRNGDTLNQLKALNVEQE---KDV 221
++ EK + C AL + +SK + E V N +LN+ +AL + E K +
Sbjct: 336 DKLEKISQETNARAPECLALKADLTSKKRVYNEAEVLYNR-SLNEYRALKKDDEQLCKRI 394
Query: 222 ERVRQRAELLEKVESMK--KKLPWLKYDMKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSK 279
E +R+ A+ + E ++ KK+ WLK +K + + +F +
Sbjct: 395 EELRKSADQSMEPERLERQKKISWLKERVKALQ------------DQEISVNQEIEQFQQ 442
Query: 280 PIEGKKQEKAILDGDCKKLSSLINENSKRRMDFLE-KVDQ 318
+E K+E + + + ++N N K+ + + K D+
Sbjct: 443 AVEKDKEEHTRIKREELDVKQILNYNQKQLKELKDSKTDR 482
Score = 58 (25.5 bits), Expect = 5.6e-11, Sum P(2) = 5.6e-11
Identities = 33/111 (29%), Positives = 51/111 (45%)
Query: 368 DKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMED-KNNKLLHAL 426
+++E +QIL L Q+ L EK+ + +N+ LR+C K+++ K K L +
Sbjct: 679 NEVENKKAQILNL-----QQHLCALEKD--IKRNEEFLRRCQLHYKELKKMKIRKCLSEI 731
Query: 427 RNSGAENIFEAY----CWLQQHRHELNKEAYGPVLLEVNVSN-RAHANYLE 472
R ENI E L+ HE NK V E N+ + H YL+
Sbjct: 732 RE--LENIEEHQSVDIATLEDEAHE-NKMKMKTV--EKNMEKQKEHMEYLK 777
Score = 49 (22.3 bits), Expect = 5.2e-13, Sum P(3) = 5.2e-13
Identities = 33/146 (22%), Positives = 63/146 (43%)
Query: 841 EYEHRQRQIEDLSTKQEADKKELKR---FLAEIDA-LKEKWLPTLRNLVAQINETFSRNF 896
E E+++ QI +L A +K++KR FL KE +R +++I E N
Sbjct: 680 EVENKKAQILNLQQHLCALEKDIKRNEEFLRRCQLHYKELKKMKIRKCLSEIREL--ENI 737
Query: 897 QEMAVAGEVSLDE--HESDFDKFGILIKVKFRQSGQLEVLSAHHQSGGERSVSTILYLVS 954
+E +L++ HE+ K + K +Q +E L + + + L +
Sbjct: 738 EEHQSVDIATLEDEAHENKM-KMKTVEKNMEKQKEHMEYLKSLKIEAENKYDAIKLKINQ 796
Query: 955 LQDLTNCPFRVVDEINQGMDPINERK 980
L + + P + DE+N ++ +K
Sbjct: 797 LSEQAD-PLK--DELNLADSEVDNQK 819
Score = 49 (22.3 bits), Expect = 2.8e-10, Sum P(3) = 2.8e-10
Identities = 37/172 (21%), Positives = 81/172 (47%)
Query: 651 EDEAAKLQKEREEI-INIVQIEKRKRREMENHIN-----LRKRKLESIEKEDDINTALAK 704
ED AA+L+++ EE + + + EK K +++++ + R E + + D+ T+ +
Sbjct: 307 EDRAARLERKTEEQQVRLNEAEK-KYKDIQDKLEKISQETNARAPECLALKADL-TSKKR 364
Query: 705 LVDQAADL-NIQQFKY-AI--EIKNLLVEIVSCKWSYAEKHMAS--IEFDAKIRELEFNL 758
+ ++A L N +Y A+ + + L I + S A++ M +E KI L+ +
Sbjct: 365 VYNEAEVLYNRSLNEYRALKKDDEQLCKRIEELRKS-ADQSMEPERLERQKKISWLKERV 423
Query: 759 KQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEM 810
K + + + E ++ VE ++ + KR+ + I +K+ E+
Sbjct: 424 KALQDQEISVNQEIEQFQQAVEKDKEEHTRIKREELDVKQILNYNQKQLKEL 475
Score = 46 (21.3 bits), Expect = 3.4e-27, Sum P(3) = 3.4e-27
Identities = 12/55 (21%), Positives = 30/55 (54%)
Query: 368 DKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKL 422
++IEK + I + ++ + R + E++ + ++ L + + KD++DK K+
Sbjct: 290 NEIEKQLNAIRD-NIKIGEDRAARLERKT--EEQQVRLNEAEKKYKDIQDKLEKI 341
Score = 43 (20.2 bits), Expect = 6.9e-27, Sum P(3) = 6.9e-27
Identities = 15/48 (31%), Positives = 26/48 (54%)
Query: 388 RLQKSEKE--KILNQNKLTLRQC----SDRLKDMEDKNNKLLHALRNS 429
R+++ E + +ILN N+ L++ +DRLK LL A+ N+
Sbjct: 453 RIKREELDVKQILNYNQKQLKELKDSKTDRLKRFGPNVPALLEAIDNA 500
Score = 43 (20.2 bits), Expect = 6.9e-27, Sum P(3) = 6.9e-27
Identities = 13/75 (17%), Positives = 35/75 (46%)
Query: 363 YEPPHDKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDR---LKDMEDKN 419
Y+ DK+EK+ + + + + K+++ N+ ++ + + LK +++
Sbjct: 331 YKDIQDKLEKISQETNARAPECLALKADLTSKKRVYNEAEVLYNRSLNEYRALKKDDEQL 390
Query: 420 NKLLHALRNSGAENI 434
K + LR S +++
Sbjct: 391 CKRIEELRKSADQSM 405
>UNIPROTKB|E2QUA0 [details] [associations]
symbol:SMC6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0090398 "cellular senescence" evidence=IEA]
[GO:0030915 "Smc5-Smc6 complex" evidence=IEA] [GO:0016605 "PML
body" evidence=IEA] [GO:0000781 "chromosome, telomeric region"
evidence=IEA] [GO:0000722 "telomere maintenance via recombination"
evidence=IEA] [GO:0000724 "double-strand break repair via
homologous recombination" evidence=IEA] InterPro:IPR027132
InterPro:IPR003395 Pfam:PF02463 GO:GO:0016605 GO:GO:0000781
GO:GO:0000722 GO:GO:0090398 GO:GO:0030915 PANTHER:PTHR19306:SF2
CTD:79677 OMA:LHYKELK GeneTree:ENSGT00550000074816
EMBL:AAEX03010748 RefSeq:XP_532882.3 ProteinModelPortal:E2QUA0
Ensembl:ENSCAFT00000006012 GeneID:475675 KEGG:cfa:475675
NextBio:20851463 Uniprot:E2QUA0
Length = 1097
Score = 215 (80.7 bits), Expect = 7.3e-27, Sum P(4) = 7.3e-27
Identities = 97/389 (24%), Positives = 169/389 (43%)
Query: 659 KEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQA--------- 709
K EE + QI R+ + R+LE+IE+ ++ +A L D+A
Sbjct: 703 KRNEEFLRRRQIHYRELKVKITESISEIRELENIEEHQSVD--IATLEDEAQENKIKMKM 760
Query: 710 ADLNIQQFKYAIE-IKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHE-KLALQ 767
+ N++Q K +E +KNL +E + K+ ++ + + A+ + E NL E +
Sbjct: 761 VEKNMEQQKENMEHLKNLKIEAEN-KYDAIKQKINQLSDLAEPLKDELNLADSEVDNQKR 819
Query: 768 ASLHYEDC-----------KKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEE 816
HYE+ K+E++ K L + QA I E++K + I
Sbjct: 820 GKRHYEEKQKEHLDTLNKKKRELDMKEKELEEKMSQARQICPERIEVKKSASILDKEINR 879
Query: 817 LEAAIQ-DNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKE 875
L IQ ++ S + + I+++Y+ + DL K K+ +K L EI +
Sbjct: 880 LRQKIQAEHASHGD-----REEIMRQYQEARETYLDLDNKVRTLKRFIK-LLEEIMTHRY 933
Query: 876 KWLPTLRN-LVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVL 934
K R L + F + A G+++ D H+++ + I V+ + +
Sbjct: 934 KTYQQFRRCLTLRCKLYFDNLLSQRAYCGKMNFD-HKNET----LSISVQPGEGNRAAFN 988
Query: 935 SAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNT 994
SGGERS ST+ +++SL + PFR +DE + MD +N R +++ A
Sbjct: 989 DMRALSGGERSFSTVCFILSLWSIAESPFRCLDEFDVYMDMVNRRIAMDMILKMADSQRF 1048
Query: 995 PQCFLLTPKLLPDLEYSEACSILNIMNGP 1023
Q LLTP+ + L S+ IL M+ P
Sbjct: 1049 RQFILLTPQSMSSLPSSKLIRILR-MSDP 1076
Score = 193 (73.0 bits), Expect = 7.3e-27, Sum P(4) = 7.3e-27
Identities = 71/240 (29%), Positives = 119/240 (49%)
Query: 23 IIE-IELHNFMTFDHL-ICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI 80
IIE I+L NFM L K GS +N V+G NGSGKS+++ A+ + LGG R +S+
Sbjct: 53 IIESIQLRNFMCHSMLGPFKFGSNVNFVVGNNGSGKSAVLTALIVGLGGKAVATNRGSSL 112
Query: 81 GAYVKRGEESGYIKISLR--GDTK------------EEHLTIMRKIDTRNKSEWFFNGKV 126
+VK G+ S I I+LR GD ++H+++ + KSE G V
Sbjct: 113 KGFVKDGQNSADISITLRNRGDDAYRANVYGNSIVVQQHISMDGSRSYKLKSE---TGTV 169
Query: 127 VP--KGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKL-SPVKLLEETEKAVGDPQLPVQH 183
V K E++ I FNIQV+N L Q+ +F + + + KA Q+ +
Sbjct: 170 VSTRKEELIAILDHFNIQVDNPVSVLTQEMSKQFLQSKNEGDKYKFFMKATQLEQMKEDY 229
Query: 184 CALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPW 243
++E +K +T E + + + L +LK +E+E+ + + + + +E +K ++ W
Sbjct: 230 SYIME--TKERTKE-QINQGEERLTELKRQCLEKEERFQSIAGLSTMKTNLEYLKHEMAW 286
Score = 86 (35.3 bits), Expect = 1.1e-13, Sum P(4) = 1.1e-13
Identities = 43/178 (24%), Positives = 80/178 (44%)
Query: 653 EAAKLQKEREEI-INIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAAD 711
+ A L+ E +E I + +EK ++ EN +L+ K+E+ K D I + +L D A
Sbjct: 743 DIATLEDEAQENKIKMKMVEKNMEQQKENMEHLKNLKIEAENKYDAIKQKINQLSDLAEP 802
Query: 712 LNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIE-FDAKIRELEFNLKQ-HEKLALQAS 769
L + E+ N K Y EK ++ + K REL+ K+ EK++
Sbjct: 803 LKDELNLADSEVDNQK----RGKRHYEEKQKEHLDTLNKKKRELDMKEKELEEKMSQARQ 858
Query: 770 LHYE--DCKKEVEHCRKHLSDAKR--QAESIAF-ITPELEKEFLEMPTTIEELEAAIQ 822
+ E + KK K ++ ++ QAE + E+ +++ E T +L+ ++
Sbjct: 859 ICPERIEVKKSASILDKEINRLRQKIQAEHASHGDREEIMRQYQEARETYLDLDNKVR 916
Score = 80 (33.2 bits), Expect = 4.5e-13, Sum P(4) = 4.5e-13
Identities = 31/155 (20%), Positives = 70/155 (45%)
Query: 724 KNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYEDCK----KEV 779
K++ EI + K + + LE ++K++E+ + +HY + K + +
Sbjct: 668 KDVDSEISDLENEVENKKAQILNLQQHLSALEKDIKRNEEFLRRRQIHYRELKVKITESI 727
Query: 780 EHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNIL 839
R+ + + Q+ IA + E ++ ++M + +E ++N+ ++ +N
Sbjct: 728 SEIRELENIEEHQSVDIATLEDEAQENKIKMKMVEKNMEQQ-KENMEHLKNLKIEAEN-- 784
Query: 840 QEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALK 874
+Y+ +++I LS E K EL +E+D K
Sbjct: 785 -KYDAIKQKINQLSDLAEPLKDELNLADSEVDNQK 818
Score = 77 (32.2 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 50/242 (20%), Positives = 109/242 (45%)
Query: 643 MQTEQRLIEDEAA-----KLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKE-D 696
M+T ++ E A +++K+ I + ++I + + ++ + ++ +L EK+
Sbjct: 273 MKTNLEYLKHEMAWAVVNEIEKQLNAIRDNIKIGEDRAARLDRKMEEQQVRLNEAEKKYK 332
Query: 697 DINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEF 756
DI L K+ + + N + A E L ++ + K Y E A + ++ + E +
Sbjct: 333 DIQDKLEKI---SQETNAR----APECMALKTDVTAKKRVYNE---AEVLYNRSLNEYKA 382
Query: 757 NLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPE---LEKEFLEMPTT 813
+K E+L + E+ KK + + +RQ + I+++ L+ + +
Sbjct: 383 LMKDDEQLCKRI----EELKKSTDQSLEP-ERLERQ-KKISWLKERVKALQDQESSINQE 436
Query: 814 IEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDAL 873
IE+ + AI+ + + I ++ + QRQ+++L + D+ LKRF + AL
Sbjct: 437 IEQFQQAIEKDKEERIRIKREELDVKHTLSYNQRQLKELKDSK-TDR--LKRFGPHVPAL 493
Query: 874 KE 875
E
Sbjct: 494 LE 495
Score = 72 (30.4 bits), Expect = 4.6e-13, Sum P(2) = 4.6e-13
Identities = 32/155 (20%), Positives = 69/155 (44%)
Query: 746 EFDAKIRELEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEK 805
E + ++ + N+K E A + E+ + + K D + + E I+ T
Sbjct: 291 EIEKQLNAIRDNIKIGEDRAARLDRKMEEQQVRLNEAEKKYKDIQDKLEKISQETNARAP 350
Query: 806 EFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDL--STKQEADKKEL 863
E + + T + + + N + ++++ E ++IE+L ST Q + + L
Sbjct: 351 ECMALKTDVTAKKRVYNEAEVLYNRSLNEYKALMKDDEQLCKRIEELKKSTDQSLEPERL 410
Query: 864 KRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQE 898
+R +I LKE+ + L++ + IN+ + FQ+
Sbjct: 411 ER-QKKISWLKER-VKALQDQESSINQEIEQ-FQQ 442
Score = 67 (28.6 bits), Expect = 8.8e-12, Sum P(4) = 8.8e-12
Identities = 33/138 (23%), Positives = 64/138 (46%)
Query: 744 SIEFDAKIRELEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPEL 803
S + D++I +LE ++ + L H +K+++ + L +RQ I + EL
Sbjct: 667 SKDVDSEISDLENEVENKKAQILNLQQHLSALEKDIKRNEEFLR--RRQ---IHY--REL 719
Query: 804 EKEFLEMPTTIEELEAAIQDNISQANSIFFLN-QNILQEYEHRQRQIEDLSTKQEADKKE 862
+ + E + I ELE NI + S+ ++ QE + + + +E +Q+ + +
Sbjct: 720 KVKITESISEIRELE-----NIEEHQSVDIATLEDEAQENKIKMKMVEKNMEQQKENMEH 774
Query: 863 LKRFLAEI----DALKEK 876
LK E DA+K+K
Sbjct: 775 LKNLKIEAENKYDAIKQK 792
Score = 56 (24.8 bits), Expect = 1.0e-12, Sum P(3) = 1.0e-12
Identities = 43/187 (22%), Positives = 80/187 (42%)
Query: 84 VKRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQV 143
+ +GEE ++ + KEE + + T + + ++ V EI K+ N
Sbjct: 243 INQGEER-LTELKRQCLEKEERFQSIAGLSTMKTNLEYLKHEMA-WAVVNEIEKQLNAIR 300
Query: 144 NNLTQFLPQDRVCEF-AKLSPVKL-LEETEKAVGDPQLPVQHC-----ALVEKSSKLKTI 196
+N+ + +DR K+ ++ L E EK D Q ++ A + LKT
Sbjct: 301 DNIK--IGEDRAARLDRKMEEQQVRLNEAEKKYKDIQDKLEKISQETNARAPECMALKT- 357
Query: 197 ECTVKRN---------GDTLNQLKALNVEQE---KDVERVRQRAELLEKVESMK--KKLP 242
+ T K+ +LN+ KAL + E K +E +++ + + E ++ KK+
Sbjct: 358 DVTAKKRVYNEAEVLYNRSLNEYKALMKDDEQLCKRIEELKKSTDQSLEPERLERQKKIS 417
Query: 243 WLKYDMK 249
WLK +K
Sbjct: 418 WLKERVK 424
Score = 46 (21.3 bits), Expect = 7.3e-27, Sum P(4) = 7.3e-27
Identities = 11/55 (20%), Positives = 31/55 (56%)
Query: 368 DKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKL 422
++IEK + I + ++ + R + +++ + + ++ L + + KD++DK K+
Sbjct: 290 NEIEKQLNAIRD-NIKIGEDRAARLDRK--MEEQQVRLNEAEKKYKDIQDKLEKI 341
Score = 41 (19.5 bits), Expect = 2.4e-26, Sum P(4) = 2.4e-26
Identities = 13/75 (17%), Positives = 34/75 (45%)
Query: 363 YEPPHDKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKD-MEDKNN- 420
Y+ DK+EK+ + + + + K+++ N+ ++ + + K M+D
Sbjct: 331 YKDIQDKLEKISQETNARAPECMALKTDVTAKKRVYNEAEVLYNRSLNEYKALMKDDEQL 390
Query: 421 -KLLHALRNSGAENI 434
K + L+ S +++
Sbjct: 391 CKRIEELKKSTDQSL 405
Score = 37 (18.1 bits), Expect = 7.3e-27, Sum P(4) = 7.3e-27
Identities = 6/18 (33%), Positives = 12/18 (66%)
Query: 590 ISRYGGHVSASVEPVNQS 607
+ R+G HV A +E ++ +
Sbjct: 483 LKRFGPHVPALLEAIDDA 500
>UNIPROTKB|E1BWW3 [details] [associations]
symbol:SMC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA] [GO:0000722 "telomere maintenance via
recombination" evidence=IEA] [GO:0000781 "chromosome, telomeric
region" evidence=IEA] [GO:0016605 "PML body" evidence=IEA]
[GO:0030915 "Smc5-Smc6 complex" evidence=IEA] [GO:0090398 "cellular
senescence" evidence=IEA] InterPro:IPR027132 InterPro:IPR003395
Pfam:PF02463 GO:GO:0016605 GO:GO:0000781 GO:GO:0000722
GO:GO:0090398 GO:GO:0030915 PANTHER:PTHR19306:SF2
GeneTree:ENSGT00550000074816 OMA:IVNTHIN EMBL:AADN02018598
EMBL:AADN02018599 EMBL:AADN02018600 IPI:IPI00591386
Ensembl:ENSGALT00000026569 Uniprot:E1BWW3
Length = 1100
Score = 206 (77.6 bits), Expect = 7.7e-27, Sum P(3) = 7.7e-27
Identities = 91/388 (23%), Positives = 175/388 (45%)
Query: 656 KLQKEREEII-NIVQIEKRKRREMENHINLRKRKLE--SIEKEDDINTALAKLVDQAADL 712
+L EI N + ++ + E I +R+ E +E D+I ++++ A+
Sbjct: 696 RLSSTENEIKQNESHLHHHRQHQKELQIKIRRTAAEIADLENVDEIQYMDIRVLEDVAEE 755
Query: 713 N---IQQFKYAIEIKNLLVEIVSCKWSYAEKHMASI-EFDAKIRELEFNLKQH-EKLALQ 767
N ++ K ++ ++ +E ++ AEK I E +++ ++ +K +K +
Sbjct: 756 NKKKMETVKQEMQEESRKMEELNEILRAAEKRFEEIKEKMSQVEDITNPIKDELDKADSE 815
Query: 768 AS------LHYEDCKKEVEHC-RKH---LSDAKRQAESIAFITPELEKEFLEMPTTIEEL 817
+YED KKE C +KH L+ +++ E ++ E +E+ T++ L
Sbjct: 816 VENRRRRLQYYEDKKKEHLTCIKKHKELLAAKEKELEEKTAQARQIYSERIEVSRTVKSL 875
Query: 818 EAA---IQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALK 874
+A +++ I S + I+Q + + + ED ++K KK + R L EI +
Sbjct: 876 DAEMNRLRERIKTEKSHRGNTEEIIQRFLDAKERYEDANSKVNNLKKFI-RVLEEIMTQR 934
Query: 875 EK-WLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEV 933
+ LR L + F + +G + D H+++ +LI V+ + +
Sbjct: 935 FNIYRRFLRLLSLRCKLYFDHLLRIRGCSGRILFD-HKNET----LLITVQPGEEDRPAP 989
Query: 934 LSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPN 993
+ SGGERS ST+ +++SL +T PFR +DE + MD +N R +++ A
Sbjct: 990 SNVRSLSGGERSFSTVCFILSLWSITESPFRCLDEFDVYMDMLNRRIAMDMILKVADSQC 1049
Query: 994 TPQCFLLTPKLLPDLEYSEACSILNIMN 1021
Q LLTP+ + L S IL + +
Sbjct: 1050 YRQFILLTPQSMSFLPVSSRIRILRMQD 1077
Score = 188 (71.2 bits), Expect = 7.7e-27, Sum P(3) = 7.7e-27
Identities = 74/244 (30%), Positives = 118/244 (48%)
Query: 23 IIE-IELHNFMTFDHLICKP---GSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRAT 78
IIE I+L NFM H + P GS LN +IG NGSGKSS++ A+ + LGG R +
Sbjct: 55 IIESIQLKNFMC--HSMLGPFQFGSNLNFIIGNNGSGKSSVLTALIVGLGGKATATNRGS 112
Query: 79 SIGAYVKRGEESGYIKISLR------------GDT--KEEHLTIMRKIDTRNKSEWFFNG 124
S+ +VK GE S I ++L+ GD+ H+ + R KS+ +G
Sbjct: 113 SLKMFVKSGETSADISVTLQNQGRDAFKPELYGDSIIVNTHINLEGSRTYRLKSK---SG 169
Query: 125 KVVP--KGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQ 182
++ K E+L + FNIQV N L Q E +KL ++ E +K +
Sbjct: 170 AIISSKKEELLGMLDHFNIQVENPVSVLTQ----EMSKLF-LQSKNEGDKYKFFMKATQL 224
Query: 183 HCALVEKSSKLKTIECT---VKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKK 239
+ S +KT E T +++ + L +LK + E+++ E + E+ + +E +K
Sbjct: 225 EQMKEDYSYIMKTKENTRLQIEQGVERLKELKRIYCEEKERYESIECVNEMQKHLEELKH 284
Query: 240 KLPW 243
K+ W
Sbjct: 285 KMAW 288
Score = 88 (36.0 bits), Expect = 1.2e-14, Sum P(3) = 1.2e-14
Identities = 44/216 (20%), Positives = 99/216 (45%)
Query: 648 RLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKE----DDINTALA 703
R++ED A + +K+ E + +Q E RK E+ + +++ E I+++ +DI +
Sbjct: 747 RVLEDVAEENKKKMETVKQEMQEESRKMEELNEILRAAEKRFEEIKEKMSQVEDITNPIK 806
Query: 704 KLVDQAADLNIQQFKYAIEI-KNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHE 762
+D+A D ++ + ++ ++ E ++C +KH + AK +ELE Q
Sbjct: 807 DELDKA-DSEVENRRRRLQYYEDKKKEHLTC----IKKHKELLA--AKEKELEEKTAQAR 859
Query: 763 KL---ALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEA 819
++ ++ S + E+ R+ + K + T E+ + FL+ E+ +
Sbjct: 860 QIYSERIEVSRTVKSLDAEMNRLRERIKTEKSHRGN----TEEIIQRFLDAKERYEDANS 915
Query: 820 AIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTK 855
+ +N+ + I L + + Q + +R + LS +
Sbjct: 916 KV-NNLKKF--IRVLEEIMTQRFNIYRRFLRLLSLR 948
Score = 64 (27.6 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 38/195 (19%), Positives = 85/195 (43%)
Query: 729 EIVSCKWSYAEKHMASIEFD---AKIRELEFNLKQ-HEKLALQASLHYEDCKKEVEHCRK 784
E + C + +KH+ ++ A + E+E ++ E + + + E +++E C+
Sbjct: 267 ESIECV-NEMQKHLEELKHKMAWAVVAEMEREIQPIREGIKAEEG-NTEKFDQKLEECQI 324
Query: 785 HLSDAKRQAESIA--FITPELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEY 842
+++A+ Q ++I IT E E L + E +Q N L + E
Sbjct: 325 KINEAEEQCKAIQEKLITVNGEAEALHAQCMSSKAE--VQTRRKAVNEAEVLYNRVRTEL 382
Query: 843 EHRQRQIEDLSTKQEADKKELKRFLAEIDAL-KEKWLPTLRNLVAQINETFSRNFQEMAV 901
+ + E L + E KK + +E + L K++ + L+ + +++ Q+M
Sbjct: 383 KRLAKDDEQLRNRIEEMKKRAYQ-ASEPERLEKQRKITQLKEKLKALHDEEIMMGQQMDQ 441
Query: 902 AGEVSLDEHESDFDK 916
+ ++ +H+ +F K
Sbjct: 442 FQQ-AIYKHKEEFAK 455
Score = 52 (23.4 bits), Expect = 7.7e-27, Sum P(3) = 7.7e-27
Identities = 15/48 (31%), Positives = 28/48 (58%)
Query: 371 EKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDK 418
E+L ++I E+ ++ Q SE E++ Q K+T Q ++LK + D+
Sbjct: 390 EQLRNRIEEM----KKRAYQASEPERLEKQRKIT--QLKEKLKALHDE 431
Score = 49 (22.3 bits), Expect = 3.8e-10, Sum P(2) = 3.8e-10
Identities = 17/87 (19%), Positives = 45/87 (51%)
Query: 368 DKIEKLGSQILELGVQANQKRLQ------KSEKEKILNQNKLTLRQCSDRLKDMEDKNNK 421
D+I+ + ++LE + N+K+++ + E K+ N++ LR R +++++K ++
Sbjct: 739 DEIQYMDIRVLEDVAEENKKKMETVKQEMQEESRKMEELNEI-LRAAEKRFEEIKEKMSQ 797
Query: 422 LLHALRNSGAENIFEAYCWLQQHRHEL 448
+ + N + + +A ++ R L
Sbjct: 798 V-EDITNPIKDELDKADSEVENRRRRL 823
Score = 48 (22.0 bits), Expect = 4.8e-10, Sum P(2) = 4.8e-10
Identities = 43/199 (21%), Positives = 77/199 (38%)
Query: 650 IEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQA 709
+ E +L K+ E++ N +IE+ K+R + +LE K + L L D+
Sbjct: 378 VRTELKRLAKDDEQLRN--RIEEMKKRAYQAS---EPERLEKQRKITQLKEKLKALHDEE 432
Query: 710 ADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQA- 768
+ Q ++ I E K ++ + D K + L L+ + A +
Sbjct: 433 IMMGQQMDQFQQAIYKHKEEFAKLKREDSDVRQ---DLDGKQKHLR-ELRDSKTNAFKRF 488
Query: 769 SLHYEDCKKEVEHC-RKHLSDAKRQAESIAFITPELEKEFLEMPTTIEEL-EAAIQDNIS 826
H +EVE R+ K AFI P+ + L + ++ L +A DN S
Sbjct: 489 GQHMPSLLEEVEKAYRQGQFKYKPVGPLGAFIHPKDPELSLAIEACLKTLVQAFCCDNHS 548
Query: 827 QANSIFFLNQNILQEYEHR 845
+ Q ++ +Y R
Sbjct: 549 DERIL----QQLMSKYYPR 563
Score = 43 (20.2 bits), Expect = 1.0e-13, Sum P(3) = 1.0e-13
Identities = 15/53 (28%), Positives = 26/53 (49%)
Query: 384 ANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAENIFE 436
A+Q+RL +E E + QN+ L K+++ K + A + EN+ E
Sbjct: 692 ASQQRLSSTENE--IKQNESHLHHHRQHQKELQIKIRRT--AAEIADLENVDE 740
Score = 40 (19.1 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 12/43 (27%), Positives = 20/43 (46%)
Query: 276 EFSKPIEGKKQEKAILDGDCKKLSSLINENSKRRMDFLEKVDQ 318
E K +E KQE ++L+ ++ KR + EK+ Q
Sbjct: 755 ENKKKMETVKQEMQEESRKMEELNEILRAAEKRFEEIKEKMSQ 797
>UNIPROTKB|Q802R8 [details] [associations]
symbol:smc6 "Structural maintenance of chromosomes protein
6" species:31033 "Takifugu rubripes" [GO:0000722 "telomere
maintenance via recombination" evidence=ISS] [GO:0000781
"chromosome, telomeric region" evidence=ISS] [GO:0016605 "PML body"
evidence=ISS] [GO:0030915 "Smc5-Smc6 complex" evidence=ISS]
[GO:0090398 "cellular senescence" evidence=ISS] InterPro:IPR027132
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0016605
GO:GO:0006281 GO:GO:0000781 GO:GO:0000722 GO:GO:0090398
eggNOG:COG1196 GO:GO:0030915 PANTHER:PTHR19306:SF2 CTD:79677
OrthoDB:EOG44QT04 EMBL:AJ543330 RefSeq:NP_001027868.1
UniGene:Tru.1990 ProteinModelPortal:Q802R8 GeneID:446077
KEGG:tru:446077 InParanoid:Q802R8 Uniprot:Q802R8
Length = 1090
Score = 202 (76.2 bits), Expect = 6.6e-26, Sum P(3) = 6.6e-26
Identities = 81/303 (26%), Positives = 138/303 (45%)
Query: 21 GNIIEIELHNFMTFDHLICKP---GSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRA 77
G + I L+NFM H P GS +N ++G NGSGKS+++ + +ALGG+ Q R
Sbjct: 53 GIVKSITLNNFMC--HANLGPFAFGSNVNFIVGKNGSGKSAILTGLIVALGGNAQATNRG 110
Query: 78 TSIGAYVKRGEESGYIKISLRGDTKEEH--------LTIMRKIDTRNKSEWFF----NGK 125
+S+ +VK GE + I+L K+ + + I +KI TR + +G
Sbjct: 111 SSLKGFVKEGESFAVVSITLNNIGKDAYKPEVYGQAIVIDQKI-TREGIRTYKLKSQSGH 169
Query: 126 VVP--KGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQH 183
++ K +++ I +NIQVNN L Q+ F L E+ + + QL
Sbjct: 170 IISTKKEDLVTILDYYNIQVNNPVTILTQEMSKYF--LHSKGGAEKYKFFMKATQLEQMK 227
Query: 184 CALVE-KSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLP 242
V KS+K T++ V+++ + L LK +E+E + + E+ K+E +KK++
Sbjct: 228 DDFVHIKSTKSVTVD-KVEQHSECLKDLKRDYLEKEDRYKSLASVNEMYTKLEELKKQMA 286
Query: 243 WLKYDMKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIE---GK-KQEKAILDGDCKKL 298
W + E+ + E+ K +E GK KQ L+ +++
Sbjct: 287 WALVGEVEKEFEPMKEKLESDRCATNKFNEKVDEWKKKVEVAEGKQKQSHEQLEEITQQV 346
Query: 299 SSL 301
S L
Sbjct: 347 SEL 349
Score = 182 (69.1 bits), Expect = 6.6e-26, Sum P(3) = 6.6e-26
Identities = 99/394 (25%), Positives = 165/394 (41%)
Query: 644 QTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALA 703
QTEQ+ E + KLQ E ++ N+ + + E+ K E+ E+E + L
Sbjct: 713 QTEQKTTEVKTMKLQLELTDLKNVEEPQSEDLAEL-------KSAFENAEQEYKQHKQLI 765
Query: 704 KLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEK 763
+ AD+ + K +L I+ W + + E +E+ K HEK
Sbjct: 766 DTAAEEADVKKVETKLTPLFTSLSCNIL---WVHCLFVLLQEELSKTDQEV-MKCKHHEK 821
Query: 764 LALQASLHYEDCKKEVEHCR-KHL-----SDAKRQAESIAFITPELEKEFLEMPTTIEEL 817
HYE+ ++ C K L S K ESIA E+ E L + T L
Sbjct: 822 -------HYEE-RRNAHLCSIKTLENNVASKEKELQESIAK-AKEICPEQLVVRRTARSL 872
Query: 818 EAAI---QDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALK 874
+ I + I+ + I++EY H +E + K + K L F+ +D +
Sbjct: 873 DVEITRLKVKIATQREHQGDREEIVREY-HEA--LESYANKAQ-QIKNLNNFIKCLDRVM 928
Query: 875 EKWL---PTLRN-LVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQ 930
++ L LR L A+ F + G ++ D H+++ + I V+ Q +
Sbjct: 929 DQRLYAYTVLRRFLSARCKYYFDSMLAQRGFTGNMTFD-HKNET----LSISVQPGQGNK 983
Query: 931 LEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQL-VRAA 989
++ SGGERS ST+ +++SL +T PFR +DE + MD N R +Q ++ A
Sbjct: 984 ADLNDMRCLSGGERSFSTVCFVLSLWPITEAPFRCLDEFDVYMDMANRRNTQRQSGLKMA 1043
Query: 990 SQPNTPQCFLLTPKLLPDLEYSEACSILNIMNGP 1023
+ Q LTP+ + L I+ + N P
Sbjct: 1044 TSQKIRQLIFLTPQSMSSLPECRRIHIVQL-NDP 1076
Score = 55 (24.4 bits), Expect = 7.0e-13, Sum P(3) = 7.0e-13
Identities = 34/179 (18%), Positives = 78/179 (43%)
Query: 651 EDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAA 710
E + + ++ EEI V + K E + + R L+S E + A+ +
Sbjct: 329 EGKQKQSHEQLEEITQQVSELQSKCTEFKTEVQRRNADLKSCEVTVHRHKAILR------ 382
Query: 711 DLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASI-EFDAKIRELEFN-------LKQHE 762
DL + + + +I +L + I + ++ M I + +A + +L + ++Q++
Sbjct: 383 DLEKDKAQLSSKINDLSLSISQATGAESQARMERIAQIEAALEDLTHHTSTLGQQIEQYQ 442
Query: 763 KLALQASLHYEDCKKEVEHCRKHLSDAKRQAESI-AFITPELEKEFLEMPTTIEELEAA 820
A K+E+E +K + +RQ +S+ + + L++ +MP + ++ A
Sbjct: 443 HSYRHAIEGQGKMKRELEGLQKSIDANRRQLQSMESSRSNRLQRFGDQMPALLAAIDEA 501
Score = 53 (23.7 bits), Expect = 6.6e-26, Sum P(3) = 6.6e-26
Identities = 37/165 (22%), Positives = 71/165 (43%)
Query: 367 HDKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHAL 426
H+++E++ Q+ EL + + + + + L ++T+ + L+D+E K+ L +
Sbjct: 336 HEQLEEITQQVSELQSKCTEFKTEVQRRNADLKSCEVTVHRHKAILRDLE-KDKAQLSSK 394
Query: 427 RNSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLEDHVGHY--IWKSFI 484
N + +I +A Q R E + A LE ++++ H + L + Y ++ I
Sbjct: 395 INDLSLSISQATGAESQARME--RIAQIEAALE-DLTH--HTSTLGQQIEQYQHSYRHAI 449
Query: 485 TQDAGDRDFLAKNLKPFDVPILNYVSNESSRKEPFQ-ISEEMRAL 528
+ L K D S ESSR Q ++M AL
Sbjct: 450 EGQGKMKRELEGLQKSIDANRRQLQSMESSRSNRLQRFGDQMPAL 494
Score = 53 (23.7 bits), Expect = 7.0e-13, Sum P(3) = 7.0e-13
Identities = 21/110 (19%), Positives = 52/110 (47%)
Query: 798 FITPELEKEFLEMPTTIE--ELEAA-IQDNISQANSIFFLNQNILQEYEHRQRQIEDLST 854
F++ ++E+ + +E +++AA IQ I + NQ++L+ + Q+ E +
Sbjct: 665 FLSKDVEEGIRHLKREMETQKVQAAHIQQQIRSTDKNISENQDLLRRTQTEQKTTEVKTM 724
Query: 855 KQEADKKELKRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGE 904
K + + +LK ++ + + L L++ + + ++ Q + A E
Sbjct: 725 KLQLELTDLKN----VEEPQSEDLAELKSAFENAEQEYKQHKQLIDTAAE 770
Score = 41 (19.5 bits), Expect = 7.8e-24, Sum P(4) = 7.8e-24
Identities = 13/41 (31%), Positives = 20/41 (48%)
Query: 382 VQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKL 422
VQA + Q +K +++N+ LR+ K E K KL
Sbjct: 686 VQAAHIQQQIRSTDKNISENQDLLRRTQTEQKTTEVKTMKL 726
Score = 41 (19.5 bits), Expect = 1.8e-11, Sum P(3) = 1.8e-11
Identities = 21/111 (18%), Positives = 42/111 (37%)
Query: 767 QASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNIS 826
+A+ +D ++ + H ++ + K QA I +K E + + Q
Sbjct: 662 RANFLSKDVEEGIRHLKREMETQKVQAAHIQQQIRSTDKNISENQDLLRRTQTE-QKTTE 720
Query: 827 QANSIFFLNQNILQEYEHRQRQ-IEDLSTKQEADKKELKRFLAEIDALKEK 876
L L+ E Q + + +L + E ++E K+ ID E+
Sbjct: 721 VKTMKLQLELTDLKNVEEPQSEDLAELKSAFENAEQEYKQHKQLIDTAAEE 771
Score = 41 (19.5 bits), Expect = 6.0e-08, Sum P(3) = 6.0e-08
Identities = 11/39 (28%), Positives = 21/39 (53%)
Query: 214 NVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAE 252
N+ + +D+ R Q + +V++MK +L D+K E
Sbjct: 701 NISENQDLLRRTQTEQKTTEVKTMKLQLELT--DLKNVE 737
Score = 39 (18.8 bits), Expect = 2.9e-11, Sum P(3) = 2.9e-11
Identities = 43/188 (22%), Positives = 77/188 (40%)
Query: 703 AKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHE 762
A + + + I+ K +E + + + + +K+++ E +R + K E
Sbjct: 663 ANFLSKDVEEGIRHLKREMETQKVQAAHIQQQIRSTDKNIS--ENQDLLRRTQTEQKTTE 720
Query: 763 KLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELE-KEFLEMPTTIEELEAAI 821
++ L D K E + L++ K AF E E K+ ++ T E EA +
Sbjct: 721 VKTMKLQLELTDLKNVEEPQSEDLAELKS-----AFENAEQEYKQHKQLIDTAAE-EADV 774
Query: 822 QDNISQANSIFF-LNQNILQEYEHRQRQIEDLS-TKQEADK-KELKRFLAEIDALKEKWL 878
+ ++ +F L+ NIL + E+LS T QE K K ++ E +
Sbjct: 775 KKVETKLTPLFTSLSCNILWVHCLFVLLQEELSKTDQEVMKCKHHEKHYEERRNAHLCSI 834
Query: 879 PTLRNLVA 886
TL N VA
Sbjct: 835 KTLENNVA 842
Score = 39 (18.8 bits), Expect = 3.7e-09, Sum P(3) = 3.7e-09
Identities = 16/61 (26%), Positives = 28/61 (45%)
Query: 85 KRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVN 144
KR S + K + R EE D R++ + +V+P G+V ++ +I +N
Sbjct: 3 KRKSISTHDKSTKRARPVEEEED-SEDADDRDQDVERLSPQVLPSGDVSDVGIVKSITLN 61
Query: 145 N 145
N
Sbjct: 62 N 62
Score = 37 (18.1 bits), Expect = 7.8e-24, Sum P(4) = 7.8e-24
Identities = 12/40 (30%), Positives = 21/40 (52%)
Query: 275 HEFSKPIEGKKQEKAILDGDCKKLSSLINENSKRRMDFLE 314
H + IEG+ + K L+G L I+ N +R++ +E
Sbjct: 443 HSYRHAIEGQGKMKRELEG----LQKSIDAN-RRQLQSME 477
>ZFIN|ZDB-GENE-070705-287 [details] [associations]
symbol:si:dkey-119f1.1 "si:dkey-119f1.1"
species:7955 "Danio rerio" [GO:0000724 "double-strand break repair
via homologous recombination" evidence=IEA] [GO:0030915 "Smc5-Smc6
complex" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
InterPro:IPR027132 InterPro:IPR003395 Pfam:PF02463
ZFIN:ZDB-GENE-070705-287 eggNOG:COG1196 EMBL:BX927289
PANTHER:PTHR19306:SF2 HOGENOM:HOG000286038 HOVERGEN:HBG093964
OrthoDB:EOG44QT04 GeneTree:ENSGT00550000074816 IPI:IPI00504950
RefSeq:NP_001121806.1 UniGene:Dr.94251 Ensembl:ENSDART00000081633
GeneID:557127 KEGG:dre:557127 OMA:YYSSERT NextBio:20881833
Uniprot:A5PN27
Length = 1090
Score = 201 (75.8 bits), Expect = 8.4e-26, Sum P(3) = 8.4e-26
Identities = 75/241 (31%), Positives = 119/241 (49%)
Query: 23 IIE-IELHNFMTFDHLICKP---GSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRAT 78
IIE I L NFM H + P G +N V+G NGSGKS+++ A+ +ALGG R +
Sbjct: 51 IIESISLRNFMC--HSLLGPFAFGPNVNFVVGNNGSGKSAVLTALIVALGGKALTTNRGS 108
Query: 79 SIGAYVKRGEESGYIKISLRG---DT-KEEHLTIMRKIDTRNKSEWF-------FNGKVV 127
S+ +VK GE S + I+LR D K E +D R SE G++V
Sbjct: 109 SLKGFVKEGESSADVSITLRNRGRDAYKPEKFGQSIVVDLRISSEGIRTYKLKSHTGQLV 168
Query: 128 P--KGEVLEITKRFNIQVNNLTQFLPQDRVCEF--AKLSPVKLLEETEKAVGDPQLPVQH 183
K E++ I FNIQV+N L Q+ F +K K + KA Q+ +
Sbjct: 169 SAKKEELVSILDHFNIQVDNPVSILTQEMSKHFLHSKGEGDKY-KFFMKATQLDQMKEDY 227
Query: 184 CALVEKSSKLKTI-ECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLP 242
++ K KT+ + TV+++ +TL +LK ++E+ + + E+ +K+ +K ++
Sbjct: 228 SYIM----KTKTLTQNTVEKHRETLLELKQKFRDKEERYKSLASLDEMQQKLNELKNQMA 283
Query: 243 W 243
W
Sbjct: 284 W 284
Score = 177 (67.4 bits), Expect = 8.4e-26, Sum P(3) = 8.4e-26
Identities = 77/382 (20%), Positives = 158/382 (41%)
Query: 646 EQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDI---NTAL 702
+++ +++ + KLQ E E+ N+ + + + +E + ++ +E + T
Sbjct: 714 DRKKVQERSRKLQAELTELQNVEEPQSEDLKPLEEELEELSGRISVCGEEFEALRRQTQT 773
Query: 703 AKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHE 762
K + A+ +Q K A+ N +VE V E+ S D ++ + + K +E
Sbjct: 774 CKKEYEEAEKVFRQKKEAV---NSIVEEVE---PIKERLNNS---DQEVERSKHHRKHYE 824
Query: 763 KLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQ 822
+ E K + + L A +A I ++ + + + I L++ I
Sbjct: 825 EKRKTHLQMIETLKTSLNQKEQELQAAIAKASEICPERSDVRRTAKSLDSEINRLKSKIN 884
Query: 823 DNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLR 882
Q I++EY + + +S +Q L++I + +R
Sbjct: 885 TQQDQQGH----RDTIVREYHEAREKFGKIS-RQVKGLDAFIHQLSKIMTTRHNVYAEMR 939
Query: 883 N-LVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVLSAHHQSG 941
L + F + G++ D H+++ + I V+ + G+ ++ SG
Sbjct: 940 MYLSVRCKYNFHSMLSQRGYKGKMIFD-HKNEI----LSISVQPGEGGKADLSDMRSLSG 994
Query: 942 GERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTPQCFLLT 1001
GERS ST+ +++SL ++ PFR +DE + MD +N R +++ A+ Q LT
Sbjct: 995 GERSFSTVCFVLSLWEIAEVPFRALDEFDVYMDMVNRRISMDMMLKIAASQRYRQFIFLT 1054
Query: 1002 PKLLPDLEYSEACSILNIMNGP 1023
P+ + L + +L + N P
Sbjct: 1055 PQNMSSLPINSLIRVLRL-NDP 1075
Score = 76 (31.8 bits), Expect = 2.4e-14, Sum P(2) = 2.4e-14
Identities = 45/234 (19%), Positives = 102/234 (43%)
Query: 650 IEDEAAKLQKEREEIINIVQIE-KRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQ 708
+++ KL + + ++ + E +++ + M+ I +R +++ + + K VD+
Sbjct: 268 LDEMQQKLNELKNQMAWALVAEMEQEMKPMKEQITAEERS--TVKYDQKVEEWKGK-VDE 324
Query: 709 AADLNIQ---QFKYAIE-IKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKL 764
A ++ Q Q + E ++ L E K E++ +A + NL+ EK
Sbjct: 325 ANKISKQLQDQLESVSERMQQLQPECSELKSRVQERNRELKTAEAALHRKRTNLRDLEKD 384
Query: 765 ALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEK-EFLE--MPTTIEELEAAI 821
Q + ++ K + +D + + E + I ELE+ F + + I++ + A
Sbjct: 385 KDQLNKRIKELKHSISQMNS--ADTQARVEKMNHIQAELEELSFRDSTLAQQIDQFKQAC 442
Query: 822 QDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKE 875
+ + + Q++ + + +QR DL+ + + +L+RF I AL E
Sbjct: 443 ESAKERHARMSRERQDLQRAIDSKQR---DLAAMESSRNNQLRRFGEHIPALME 493
Score = 71 (30.1 bits), Expect = 8.2e-15, Sum P(3) = 8.2e-15
Identities = 25/146 (17%), Positives = 69/146 (47%)
Query: 643 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKE-DDINTA 701
+Q + + + +LQ E E+ + VQ R+ + E ++ ++ L +EK+ D +N
Sbjct: 332 LQDQLESVSERMQQLQPECSELKSRVQERNRELKTAEAALHRKRTNLRDLEKDKDQLNKR 391
Query: 702 LAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQH 761
+ +L + +N + +E N + + + S+ + +A + D + E ++H
Sbjct: 392 IKELKHSISQMNSADTQARVEKMNHIQAELE-ELSFRDSTLAQ-QIDQFKQACESAKERH 449
Query: 762 EKLALQASLHYEDCKKEVEHCRKHLS 787
+++ + +D ++ ++ ++ L+
Sbjct: 450 ARMSRER----QDLQRAIDSKQRDLA 471
Score = 58 (25.5 bits), Expect = 8.4e-26, Sum P(3) = 8.4e-26
Identities = 40/189 (21%), Positives = 89/189 (47%)
Query: 368 DKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDME-DKN--NKLLH 424
D++E + ++ +L + ++ + + E+ + L + L + L+D+E DK+ NK +
Sbjct: 334 DQLESVSERMQQLQPECSELKSRVQERNRELKTAEAALHRKRTNLRDLEKDKDQLNKRIK 393
Query: 425 ALRNSGAE-NIFEAYCWLQQHRH---ELNKEAYGPVLL--EVNVSNRAHANYLEDHVGHY 478
L++S ++ N + +++ H EL + ++ L +++ +A + E H
Sbjct: 394 ELKHSISQMNSADTQARVEKMNHIQAELEELSFRDSTLAQQIDQFKQACESAKERHARMS 453
Query: 479 IWKSFITQ--DAGDRDFLA----KN--LKPFD--VPILNYVSNESSRKEPFQISEEMRAL 528
+ + + D+ RD A +N L+ F +P L +E+ + F++ + + L
Sbjct: 454 RERQDLQRAIDSKQRDLAAMESSRNNQLRRFGEHIPALMEAIDEAHHRGKFRM-KPVGPL 512
Query: 529 GISARL-DQ 536
G RL DQ
Sbjct: 513 GFCIRLRDQ 521
Score = 57 (25.1 bits), Expect = 8.2e-15, Sum P(3) = 8.2e-15
Identities = 24/119 (20%), Positives = 59/119 (49%)
Query: 781 HCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAI---QDNISQANSIFFLNQN 837
+ ++ S + +A+ +++ ++E+E + + ++ A + Q ++ Q NQ
Sbjct: 650 YTNRYYSSEQHRAQ---YLSRDVEEEIRHLQSALQTQRAQLDRFQQDMQQVGEEERQNQT 706
Query: 838 ILQE-YEHRQRQIEDLSTKQEADKKELKRFLA-EIDALK--EKWLPTLRNLVAQINETF 892
+L+ Y+ R++ +++ S K +A+ EL+ + + LK E+ L L ++ E F
Sbjct: 707 LLRRAYDDRKK-VQERSRKLQAELTELQNVEEPQSEDLKPLEEELEELSGRISVCGEEF 764
Score = 49 (22.3 bits), Expect = 7.2e-25, Sum P(3) = 7.2e-25
Identities = 48/259 (18%), Positives = 111/259 (42%)
Query: 358 QTVPAYEPPHDKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLR--QCSDRLKDM 415
+++ + + K+ +L +Q + + A ++ K KE+I + + T++ Q + K
Sbjct: 263 KSLASLDEMQQKLNELKNQ-MAWALVAEMEQEMKPMKEQITAEERSTVKYDQKVEEWKGK 321
Query: 416 EDKNNKLLHALRNSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLEDHV 475
D+ NK+ L++ E++ E +QQ + E ++ L+ V R +
Sbjct: 322 VDEANKISKQLQDQ-LESVSER---MQQLQPECSE-------LKSRVQERNRELKTAEAA 370
Query: 476 GHYIWKSFITQDAGDRDFLAKNLKPFDVPI--LNYVSNESSRKEPFQISEEMRALG---- 529
H ++ + D+D L K +K I +N ++ ++ I E+ L
Sbjct: 371 LHRK-RTNLRDLEKDKDQLNKRIKELKHSISQMNSADTQARVEKMNHIQAELEELSFRDS 429
Query: 530 -ISARLDQVFDAPHAVKEVLISQFGLDSSYIGSKETDQKADNVAKLGILDFWTPENHYRW 588
++ ++DQ A + KE ++ + + + D K ++A + E+
Sbjct: 430 TLAQQIDQFKQACESAKE-RHARMSRERQDL-QRAIDSKQRDLAAM--------ESSRNN 479
Query: 589 SISRYGGHVSASVEPVNQS 607
+ R+G H+ A +E ++++
Sbjct: 480 QLRRFGEHIPALMEAIDEA 498
Score = 48 (22.0 bits), Expect = 1.4e-12, Sum P(3) = 1.4e-12
Identities = 33/156 (21%), Positives = 66/156 (42%)
Query: 643 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKE-DDINTA 701
+Q + ++ L++E EE+ + + + + K++ E EK A
Sbjct: 732 LQNVEEPQSEDLKPLEEELEELSGRISVCGEEFEALRRQTQTCKKEYEEAEKVFRQKKEA 791
Query: 702 LAKLVDQAADLNIQQFKYAIEIKNLLVEIVSC-KWSYAEKHMASIEFDAKIRELEFNLKQ 760
+ +V++ ++ K + + VE + Y EK ++ I L+ +L Q
Sbjct: 792 VNSIVEE-----VEPIKERLNNSDQEVERSKHHRKHYEEKRKTHLQM---IETLKTSLNQ 843
Query: 761 HEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESI 796
E+ LQA++ K E C + SD +R A+S+
Sbjct: 844 KEQ-ELQAAI-----AKASEICPER-SDVRRTAKSL 872
Score = 48 (22.0 bits), Expect = 9.9e-09, Sum P(3) = 9.9e-09
Identities = 35/163 (21%), Positives = 67/163 (41%)
Query: 154 RVCEFAKLSPVKLLEETEKAVGDPQLPVQ-HCA-----LVEKSSKLKTIECTVKRNGDTL 207
+V E K+S K L++ ++V + +Q C+ + E++ +LKT E + R L
Sbjct: 321 KVDEANKIS--KQLQDQLESVSERMQQLQPECSELKSRVQERNRELKTAEAALHRKRTNL 378
Query: 208 NQLKALNVEQEKDVERVRQRA-ELLEKVESMKKKLPWLKYDMKKAEYIXXXXXXXXXXXX 266
L EKD +++ +R EL + M + ++K +I
Sbjct: 379 RDL-------EKDKDQLNKRIKELKHSISQMNSADTQAR--VEKMNHIQAELEELSFRDS 429
Query: 267 XXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENSKRR 309
+ +F + E K+ A + + + L I+ SK+R
Sbjct: 430 TLA--QQIDQFKQACESAKERHARMSRERQDLQRAID--SKQR 468
Score = 45 (20.9 bits), Expect = 1.9e-24, Sum P(3) = 1.9e-24
Identities = 12/37 (32%), Positives = 21/37 (56%)
Query: 386 QKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKL 422
Q Q E+E+ QN+ LR+ D K +++++ KL
Sbjct: 692 QDMQQVGEEER---QNQTLLRRAYDDRKKVQERSRKL 725
Score = 42 (19.8 bits), Expect = 8.0e-11, Sum P(2) = 8.0e-11
Identities = 13/64 (20%), Positives = 33/64 (51%)
Query: 364 EPPHDKIEKLGSQILELG--VQANQKRLQKSEKE-----KILNQNKLTLRQCSDRLKDME 416
+P +++E+L +I G +A +++ Q +KE K+ Q K + + ++ ++
Sbjct: 744 KPLEEELEELSGRISVCGEEFEALRRQTQTCKKEYEEAEKVFRQKKEAVNSIVEEVEPIK 803
Query: 417 DKNN 420
++ N
Sbjct: 804 ERLN 807
>TAIR|locus:2161163 [details] [associations]
symbol:MIM "AT5G61460" species:3702 "Arabidopsis
thaliana" [GO:0005524 "ATP binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;ISS] [GO:0007059 "chromosome segregation"
evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=IMP] [GO:0000724 "double-strand break repair via
homologous recombination" evidence=RCA;IMP] [GO:0007062 "sister
chromatid cohesion" evidence=RCA;IMP] [GO:0010165 "response to
X-ray" evidence=IMP] [GO:0000278 "mitotic cell cycle" evidence=RCA]
[GO:0006259 "DNA metabolic process" evidence=RCA] [GO:0006261
"DNA-dependent DNA replication" evidence=RCA] [GO:0006275
"regulation of DNA replication" evidence=RCA] [GO:0006306 "DNA
methylation" evidence=RCA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=RCA] [GO:0007126 "meiosis"
evidence=RCA] [GO:0009555 "pollen development" evidence=RCA]
[GO:0016444 "somatic cell DNA recombination" evidence=RCA]
[GO:0016568 "chromatin modification" evidence=RCA] [GO:0031047
"gene silencing by RNA" evidence=RCA] [GO:0031048 "chromatin
silencing by small RNA" evidence=RCA] [GO:0033044 "regulation of
chromosome organization" evidence=RCA] [GO:0043687
"post-translational protein modification" evidence=RCA] [GO:0045132
"meiotic chromosome segregation" evidence=RCA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0051726 "regulation of cell cycle" evidence=RCA]
InterPro:IPR027132 EMBL:CP002688 GenomeReviews:BA000015_GR
HSSP:P58301 GO:GO:0000724 GO:GO:0010165 GO:GO:0007062
eggNOG:COG1196 PANTHER:PTHR19306:SF2 OMA:CANEANY EMBL:AB016887
IPI:IPI00530052 RefSeq:NP_200954.1 UniGene:At.8630
ProteinModelPortal:Q9FII7 SMR:Q9FII7 STRING:Q9FII7 PaxDb:Q9FII7
PRIDE:Q9FII7 EnsemblPlants:AT5G61460.1 GeneID:836267
KEGG:ath:AT5G61460 TAIR:At5g61460 HOGENOM:HOG000030109
InParanoid:Q9FII7 PhylomeDB:Q9FII7 ProtClustDB:CLSN2686921
Genevestigator:Q9FII7 Uniprot:Q9FII7
Length = 1057
Score = 217 (81.4 bits), Expect = 3.6e-25, Sum P(2) = 3.6e-25
Identities = 144/672 (21%), Positives = 275/672 (40%)
Query: 368 DKIEKLGSQILE----LGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLL 423
+K+E L S++ E +A + R + E ++ ++ R + + D++ +
Sbjct: 390 EKVETLRSRLKEEENCFLEKAFEGRKKMEHIEDMIKNHQKRQRFITSNINDLKKHQTNKV 449
Query: 424 HALRNSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSN-RAHANYLEDHVGHYIWKS 482
A N+ +A ++++ K GP+ V + N A+ +E +G + +
Sbjct: 450 TAFGGDRVINLLQA---IERNHRRFRKPPIGPIGSHVTLVNGNKWASSVEQALGTLL-NA 505
Query: 483 FITQDAGDRDFLAKNLKPFDVPILNYVSNESSRKEPFQISEEMRALGISARLDQVFDAPH 542
FI D D L + L + + SR I M + V D+ +
Sbjct: 506 FIVTDHKDSLTLRGCANEANYRNLKIIIYDFSRPR-LNIPRHMVPQTEHPTIFSVIDSDN 564
Query: 543 -AVKEVLISQFGLDSSYIGSKETDQKADNVAKL--GILDFWTPENHYRWSISRYGGHVSA 599
V VL+ Q G++ + + KA K + + +T + + + + G V
Sbjct: 565 PTVLNVLVDQSGVERQVLAENYEEGKAVAFGKRLSNLKEVYTLDGYKMF----FRGPVQT 620
Query: 600 SVEPVNQSRLLLC-SVDGNXXXXXXXXXXXXXXXXXXXXXXXXXMQTEQRLIEDEAAKLQ 658
++ P+++ LC S D + + L E + +L+
Sbjct: 621 TLPPLSRRPSRLCASFDDQIKDLEIEASKEQNEINQCMRRKREAEENLEEL-ELKVRQLK 679
Query: 659 KEREEIINIVQIEKRKRREMENHINLRKRKLESI---EKEDDINTALAKLVDQAADLN-I 714
K R + ++ ++ + +++N + L S E + +I L ++ ++ A L +
Sbjct: 680 KHRSQAEKVLTTKELEMHDLKNTVAAEIEALPSSSVNELQREIMKDLEEIDEKEAFLEKL 739
Query: 715 QQFKYAIEIK-NLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQAS---- 769
Q E+K N L + + A E DA E E LK+ EK LQ++
Sbjct: 740 QNCLKEAELKANKLTALFENM-----RESAKGEIDA-FEEAENELKKIEK-DLQSAEAEK 792
Query: 770 LHYEDCKK-----EVEHCRKHLSDAK-RQAES---IAFITPELEKEFLEM--PTTIEELE 818
+HYE+ K ++++ + + K ++ ES + I PE E E L +T E+L
Sbjct: 793 IHYENIMKNKVLPDIKNAEANYEELKNKRKESDQKASEICPESEIESLGPWDGSTPEQLS 852
Query: 819 AAI---QDNISQANSIFFLN-QNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALK 874
A I + + N F + ++ YE +R+I K D +E + +A +AL
Sbjct: 853 AQITRMNQRLHRENQQFSESIDDLRMMYESLERKIAK-KRKSYQDHRE--KLMACKNALD 909
Query: 875 EKWLPTLRN---LVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQL 931
+W RN L Q+ F+ + + ++G + + ++ + I+VK Q
Sbjct: 910 SRWAKFQRNASLLRRQLTWQFNAHLGKKGISGHIKVS-----YENKTLSIEVKMPQDATS 964
Query: 932 EVL-SAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAAS 990
V+ SGGERS ST+ + ++L ++T PFR +DE + MD ++ + LV A
Sbjct: 965 NVVRDTKGLSGGERSFSTLCFALALHEMTEAPFRAMDEFDVFMDAVSRKISLDALVDFAI 1024
Query: 991 QPNTPQCFLLTP 1002
+ Q +TP
Sbjct: 1025 GEGS-QWMFITP 1035
Score = 163 (62.4 bits), Expect = 3.6e-25, Sum P(2) = 3.6e-25
Identities = 60/244 (24%), Positives = 114/244 (46%)
Query: 21 GNIIEIELHNFMTFDHLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI 80
G+I+ I++ NFM +L + G +N + G NGSGKS+++ A+ +A G + RA ++
Sbjct: 20 GSILRIKVENFMCHSNLQIEFGEWVNFITGQNGSGKSAILTALCVAFGCRARGTQRAATL 79
Query: 81 GAYVKRGEESGYIKISLRGDTKEEH--------LTIMRKID---TRNKSEWFFNGKVVPK 129
++K G +++ ++ ++ + I R+I T + + KV K
Sbjct: 80 KDFIKTGCSYAVVQVEMKNSGEDAFKPEIYGGVIIIERRITESATATVLKDYLGKKVSNK 139
Query: 130 -GEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVK-LLEETEKAVGDPQLPVQHCALV 187
E+ E+ + FNI V N + QD+ EF K + KA Q+ ++
Sbjct: 140 RDELRELVEHFNIDVENPCVVMSQDKSREFLHSGNDKDKFKFFFKATLLQQVNDLLQSIY 199
Query: 188 EKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWL-KY 246
E +K I V +T+ ++ E ++ + Q E+ ++++ +KKKL W Y
Sbjct: 200 EHLTKATAI---VDELENTIKPIEKEISELRGKIKNMEQVEEIAQRLQQLKKKLAWSWVY 256
Query: 247 DMKK 250
D+ +
Sbjct: 257 DVDR 260
Score = 63 (27.2 bits), Expect = 1.3e-08, Sum P(3) = 1.3e-08
Identities = 46/208 (22%), Positives = 88/208 (42%)
Query: 650 IEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTA-LAKLVDQ 708
+ D +LQ++ E+I+ + K + + I+ K+ES+ A +A L+D+
Sbjct: 255 VYDVDRQLQEQTEKIVKL----KERIPTCQAKIDWELGKVESLRDTLTKKKAQVACLMDE 310
Query: 709 AADLN--IQQF----KYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHE 762
+ + I+ F K A+ K L E + K +Y +K ++R LE +Q
Sbjct: 311 STAMKREIESFHQSAKTAVREKIALQEEFNHKCNYVQK------IKDRVRRLE---RQVG 361
Query: 763 KLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQ 822
+ Q + + + E+E K+L + E++ E E FLE + I+
Sbjct: 362 DINEQTMKNTQAEQSEIEEKLKYLEQEVEKVETLRSRLKEEENCFLEKAFEGRKKMEHIE 421
Query: 823 DNI-SQANSIFFLNQNILQEYEHRQRQI 849
D I + F+ NI +H+ ++
Sbjct: 422 DMIKNHQKRQRFITSNINDLKKHQTNKV 449
Score = 56 (24.8 bits), Expect = 5.2e-14, Sum P(2) = 5.2e-14
Identities = 17/60 (28%), Positives = 33/60 (55%)
Query: 184 CALVEK-SSKLKTIECTVKRNGDTLNQ-LKALNVEQEKDVERVRQRAELLEKVESMKKKL 241
C V+K +++ +E V GD Q +K EQ + E+++ + +EKVE+++ +L
Sbjct: 343 CNYVQKIKDRVRRLERQV---GDINEQTMKNTQAEQSEIEEKLKYLEQEVEKVETLRSRL 399
Score = 55 (24.4 bits), Expect = 6.5e-14, Sum P(2) = 6.5e-14
Identities = 28/102 (27%), Positives = 48/102 (47%)
Query: 142 QVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVK 201
QVN+L Q + + K + + ++E E + P++ + E K+K +E V+
Sbjct: 190 QVNDLLQSIYE----HLTKATAI--VDELENTIK----PIEK-EISELRGKIKNME-QVE 237
Query: 202 RNGDTLNQLKA-LNVEQEKDVERVRQRAELLEKVESMKKKLP 242
L QLK L DV+R Q E EK+ +K+++P
Sbjct: 238 EIAQRLQQLKKKLAWSWVYDVDR--QLQEQTEKIVKLKERIP 277
Score = 47 (21.6 bits), Expect = 5.1e-07, Sum P(3) = 5.1e-07
Identities = 15/51 (29%), Positives = 29/51 (56%)
Query: 644 QTEQRLIEDEAAKLQKEREEIINI-VQIEKRKRREMENHINLRKRKLESIE 693
Q EQ IE++ L++E E++ + ++++ + +E RK K+E IE
Sbjct: 372 QAEQSEIEEKLKYLEQEVEKVETLRSRLKEEENCFLEKAFEGRK-KMEHIE 421
Score = 43 (20.2 bits), Expect = 1.3e-08, Sum P(3) = 1.3e-08
Identities = 12/46 (26%), Positives = 25/46 (54%)
Query: 968 EINQGMDPINERKMFQQLVRAASQPNTPQCFLLTPKLLPDLEYSEA 1013
EI+ + NE K ++ +++A ++ K+LPD++ +EA
Sbjct: 767 EIDAFEEAENELKKIEKDLQSAEAEKIHYENIMKNKVLPDIKNAEA 812
Score = 38 (18.4 bits), Expect = 4.0e-06, Sum P(3) = 4.0e-06
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 299 SSLINENSKRRMDFLEKVDQ 318
SS +NE + M LE++D+
Sbjct: 712 SSSVNELQREIMKDLEEIDE 731
>ASPGD|ASPL0000035336 [details] [associations]
symbol:AN10415 species:162425 "Emericella nidulans"
[GO:0006281 "DNA repair" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0030915 "Smc5-Smc6
complex" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006418 "tRNA aminoacylation for protein translation"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004812
"aminoacyl-tRNA ligase activity" evidence=IEA] InterPro:IPR027132
InterPro:IPR003395 Pfam:PF02463 EMBL:BN001306 PANTHER:PTHR19306:SF2
EnsemblFungi:CADANIAT00009574 HOGENOM:HOG000193352 OMA:GETSANI
Uniprot:C8VHA6
Length = 1146
Score = 204 (76.9 bits), Expect = 1.6e-22, Sum P(4) = 1.6e-22
Identities = 69/256 (26%), Positives = 116/256 (45%)
Query: 10 KVSRGEDD-YMPGN--IIE-IELHNFMTFDHLICKPGSRLNLVIGPNGSGKSSLVCAIAL 65
K S G D+ P I+E +E +NFM DH + G +N ++G NGSGKS+++ AI L
Sbjct: 89 KYSFGSDEPNAPSEHGILERVECYNFMCHDHFQVELGPLINFIVGKNGSGKSAVLTAITL 148
Query: 66 ALGGDTQLLGRATSIGAYVKRGEESGYIKISLRG--------DTKEEHLTIMRKIDTRNK 117
LGG R S+ +++K G+ES I + ++ D + + + R
Sbjct: 149 CLGGKASTTNRGQSLKSFIKEGKESATIIVRIKNQGDGAYLPDDLGKSIIVERHFSKSGA 208
Query: 118 SEWFF---NGKV--VPKGEVLEITKRFNIQVNNLTQFLPQDRVCEF-AKLSPVKLLEETE 171
S + NG++ + E+ I F +Q N L QD +F + SP + +
Sbjct: 209 SSFKIKADNGRIFSTKRTELDAIIDHFTLQFENPMNVLSQDMARQFLSSSSPAEKYKFFV 268
Query: 172 KAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELL 231
K V QL Q L+E+ IE +K ++ LK E+ +E Q+ L
Sbjct: 269 KGVQLEQLD-QDYRLIEEYGD--QIEEKIKSKQQDVSVLKNRRDAAERKLEMSDQQENLR 325
Query: 232 EKVESMKKKLPWLKYD 247
E+ ++++ W + +
Sbjct: 326 ERQRKLRRQAAWAQVE 341
Score = 135 (52.6 bits), Expect = 1.6e-22, Sum P(4) = 1.6e-22
Identities = 69/352 (19%), Positives = 142/352 (40%)
Query: 653 EAAKLQKEREEIINIVQIEKRKRREMEN-HINLRKRKLESIEKEDDINTALAKLVDQAAD 711
E+ + EE+ +Q E + ++E +LR+ + E + E ++ A + +
Sbjct: 775 ESQRKDDRIEELEESLQKEGSQDGDLEILQASLREAQEEKLTHEGSLDDAANAMTEMMQ- 833
Query: 712 LNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLH 771
N+++ K + K+ + + + AE I + R E N +L +
Sbjct: 834 -NLKRIKKELATKDAEIARLKDELRVAESEQYLIADKRRKRIGEKNAAV--ELVDDTNRR 890
Query: 772 YEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIE-ELEAAIQDNISQANS 830
K++ + +D + I+ +E + E P T++ +LE +D ++ +
Sbjct: 891 RARMKQKRDSAD---ADVLEYISKASVISERVEIDEGETPATLDRKLERVTRDMVTYSRE 947
Query: 831 IFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLVAQINE 890
+ + I E + + + + E L+ A ++ KE+W ++ ++
Sbjct: 948 LGGSREEIRAEADTAIKAHQQALKQVEEFGMLLEVLKASLNHRKERWRAFRSHISSRAKA 1007
Query: 891 TFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVLSAHHQSGGERSVSTIL 950
F+ E + G + D D + ++ + E A SGGE+S S +
Sbjct: 1008 QFTYLLSERSFRGRLLADHENKTLD---LQVEPDITKDSS-EGRGARTLSGGEKSFSQVC 1063
Query: 951 YLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTPQCFLLTP 1002
L++L + P R +DE + MD IN + L+ AA + Q L+TP
Sbjct: 1064 LLLALWEAMGSPIRCLDEFDVYMDHINRKMAIDMLMYAARRSVGRQFILITP 1115
Score = 77 (32.2 bits), Expect = 1.2e-16, Sum P(4) = 1.2e-16
Identities = 67/320 (20%), Positives = 136/320 (42%)
Query: 648 RLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVD 707
R+ D ++++ +RE + N+ Q+ + E+ + + R ++ E+ + L +
Sbjct: 718 RMKSDRDSQIRVQREAVANLRQVLNAREEELRSAQSHLTRCRQAFERNERKKNFLV-IES 776
Query: 708 QAADLNIQQFKYAIEIKNLL---VEIV--SCKWSYAEK--HMASIEFDAK-IRELEFNLK 759
Q D I++ + +++ + +EI+ S + + EK H S++ A + E+ NLK
Sbjct: 777 QRKDDRIEELEESLQKEGSQDGDLEILQASLREAQEEKLTHEGSLDDAANAMTEMMQNLK 836
Query: 760 QHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAF-ITPELEKEFLEMPTTIEELE 818
+ +K E K+ E R L D R AES + I + K E +E ++
Sbjct: 837 RIKK---------ELATKDAEIAR--LKDELRVAESEQYLIADKRRKRIGEKNAAVELVD 885
Query: 819 AAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWL 878
+ + ++L EY + I S + E D+ E A +D E+
Sbjct: 886 DTNRRRARMKQKRDSADADVL-EYISKASVI---SERVEIDEGETP---ATLDRKLER-- 936
Query: 879 PTLRNLVAQINETFSRNFQEMAVAGEVSLDEHES---DFDKFGILIKV-KFRQSGQLEVL 934
R++V E + +E+ + ++ H+ ++FG+L++V K + + E
Sbjct: 937 -VTRDMVTYSRE-LGGSREEIRAEADTAIKAHQQALKQVEEFGMLLEVLKASLNHRKERW 994
Query: 935 SAHHQSGGERSVSTILYLVS 954
A R+ + YL+S
Sbjct: 995 RAFRSHISSRAKAQFTYLLS 1014
Score = 72 (30.4 bits), Expect = 1.6e-22, Sum P(4) = 1.6e-22
Identities = 48/223 (21%), Positives = 88/223 (39%)
Query: 363 YEPPHDKIEKLGSQILELGVQAN---QKRLQKSEKEKIL-NQNKLTLRQCSDRLKDMEDK 418
Y D++E+ +E+ Q + Q Q S+ + +Q K + + +D+E+
Sbjct: 460 YSRKLDELERAKQDAMEVRKQIDELEQNASQLSDDIRAAESQEKAAYQPVAQARRDLEEA 519
Query: 419 NNKLLHAL------RNSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLE 472
N+ LLH L RNSG A Q + GP+ V + ++ LE
Sbjct: 520 NS-LLHNLNREGSGRNSGFPERMSALLKAIQQNRSFTETPVGPIGNFVTLLKPEWSSILE 578
Query: 473 DHVGHYIWKSFITQDAGDRDFLAKNLKPFDVPILNYVSN----ESSRKEPFQ-ISEEMRA 527
G + FI D+ L++ + + P ++ + +S+ EP Q + +R
Sbjct: 579 SSFGATL-NGFIVTSKRDQSILSEIMHRVNCPTPIFIGSGGSINTSQHEPDQQFNTVLRV 637
Query: 528 LGISARL-DQVFDAPHAVKE-VLISQFGLDSSYIGSKETDQKA 568
L L + H +++ +LI SS + E + A
Sbjct: 638 LQFDNELVRRQLVINHGIEQNLLIENLEEASSVLFDGERPRNA 680
Score = 57 (25.1 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 15/66 (22%), Positives = 32/66 (48%)
Query: 643 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTAL 702
+Q EQR I + + +++ + Q+++ RR + H RKL+ +E+ +
Sbjct: 420 LQAEQRRIREHVREANARIQQLQH--QVDEETRRLADLHGGGYSRKLDELERAKQDAMEV 477
Query: 703 AKLVDQ 708
K +D+
Sbjct: 478 RKQIDE 483
Score = 56 (24.8 bits), Expect = 1.5e-14, Sum P(4) = 1.5e-14
Identities = 34/158 (21%), Positives = 70/158 (44%)
Query: 644 QTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALA 703
++EQ LI D+ K E+ + +V R+R M K+K +S + + + A
Sbjct: 860 ESEQYLIADKRRKRIGEKNAAVELVDDTNRRRARM-------KQKRDSADADVLEYISKA 912
Query: 704 KLVDQAADLNIQQFKYAIE--IKNLLVEIVSCKWSYA-EKHMASIEFDAKIRELEFNLKQ 760
++ + +++ + ++ ++ + ++V+ + E D I+ + LKQ
Sbjct: 913 SVISERVEIDEGETPATLDRKLERVTRDMVTYSRELGGSREEIRAEADTAIKAHQQALKQ 972
Query: 761 HEKLA-----LQASLHYEDCKKEVEHCRKHLSD-AKRQ 792
E+ L+ASL++ K+ R H+S AK Q
Sbjct: 973 VEEFGMLLEVLKASLNHR--KERWRAFRSHISSRAKAQ 1008
Score = 51 (23.0 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 12/44 (27%), Positives = 22/44 (50%)
Query: 164 VKLLEETEKAVGDPQLP--VQHCALVEKSSKLKTIECTVKRNGD 205
++ LEE + D + P + C + KS + + I + RNG+
Sbjct: 661 IENLEEASSVLFDGERPRNAKRCFCINKSDRRRGILLSYSRNGE 704
Score = 42 (19.8 bits), Expect = 2.8e-10, Sum P(3) = 2.8e-10
Identities = 10/36 (27%), Positives = 17/36 (47%)
Query: 502 DVPILNYVSNESSRKEPFQISEEMRALGISARLDQV 537
D +L Y+S S E +I E + +L++V
Sbjct: 902 DADVLEYISKASVISERVEIDEGETPATLDRKLERV 937
Score = 39 (18.8 bits), Expect = 1.6e-22, Sum P(4) = 1.6e-22
Identities = 8/28 (28%), Positives = 16/28 (57%)
Query: 291 LDGDCKKLSSLINENSKRRMDFLEKVDQ 318
+D + ++L+ L R++D LE+ Q
Sbjct: 445 VDEETRRLADLHGGGYSRKLDELERAKQ 472
Score = 39 (18.8 bits), Expect = 1.1e-05, Sum P(4) = 1.1e-05
Identities = 9/34 (26%), Positives = 18/34 (52%)
Query: 202 RNGDTLNQLKALNVEQEKDVERVRQRAELLEKVE 235
R + LN+ L EQ + E VR+ +++++
Sbjct: 409 RWNEALNERHELQAEQRRIREHVREANARIQQLQ 442
Score = 38 (18.4 bits), Expect = 1.2e-19, Sum P(3) = 1.2e-19
Identities = 7/20 (35%), Positives = 15/20 (75%)
Query: 432 ENIFEAYCWLQQHRHELNKE 451
E++ EA +QQ +H++++E
Sbjct: 429 EHVREANARIQQLQHQVDEE 448
>UNIPROTKB|I3L795 [details] [associations]
symbol:I3L795 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030915 "Smc5-Smc6 complex" evidence=IEA] [GO:0000724
"double-strand break repair via homologous recombination"
evidence=IEA] InterPro:IPR027131 PANTHER:PTHR19306:SF1
GeneTree:ENSGT00550000074963 EMBL:CU915560
Ensembl:ENSSSCT00000029379 Uniprot:I3L795
Length = 176
Score = 272 (100.8 bits), Expect = 2.0e-22, P = 2.0e-22
Identities = 59/141 (41%), Positives = 84/141 (59%)
Query: 105 HLTIMRKIDT-RNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSP 163
+L I R+ID +N+S WF N K + V E NIQV NL QFLPQD+V EFAKLS
Sbjct: 19 NLVITREIDVAKNQSFWFINKKPTTQKVVEEQVAALNIQVGNLCQFLPQDKVGEFAKLSK 78
Query: 164 VKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVER 223
++LLE TEK++G P++ HC L K K +E + K + L ++ N ++DVER
Sbjct: 79 IELLEATEKSIGPPEMHRYHCELKNFREKEKQLETSCKEKTEYLEKMIQRNERYKQDVER 138
Query: 224 VRQRAELLEKVESMKKKLPWL 244
+R L+ +E ++ K PW+
Sbjct: 139 FYERKRHLDLIEMLEAKRPWV 159
>UNIPROTKB|Q9X0R4 [details] [associations]
symbol:smc "Chromosome partition protein Smc"
species:243274 "Thermotoga maritima MSB8" [GO:0042802 "identical
protein binding" evidence=IPI] InterPro:IPR024704 HAMAP:MF_01894
InterPro:IPR010935 InterPro:IPR011890 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0005737 GO:GO:0005694 GO:GO:0003677
GO:GO:0006260 GO:GO:0006281 GO:GO:0006310 GO:GO:0030261
EMBL:AE000512 GenomeReviews:AE000512_GR GO:GO:0007062
SUPFAM:SSF75553 KO:K03529 TIGRFAMs:TIGR02168 EMBL:AGIJ01000001
PIR:A72287 RefSeq:NP_228987.1 PDB:1E69 PDB:1GXJ PDB:1GXK PDB:1GXL
PDBsum:1E69 PDBsum:1GXJ PDBsum:1GXK PDBsum:1GXL SMR:Q9X0R4
GeneID:898303 KEGG:tma:TM1182 PATRIC:23937304 OMA:NNEVHAL
ProtClustDB:CLSK875623 EvolutionaryTrace:Q9X0R4 Uniprot:Q9X0R4
Length = 1170
Score = 208 (78.3 bits), Expect = 1.1e-21, Sum P(4) = 1.1e-21
Identities = 96/396 (24%), Positives = 192/396 (48%)
Query: 643 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKE-DDINTA 701
++ E++++++ K+ R E+ N+++ + R +EM + + +E I +E +DI
Sbjct: 790 LEKEKKILDELNEKIFTLRAEVGNLLETKDRYEKEMRD----TGKMIERIARETEDIKLQ 845
Query: 702 LAKLVDQAADLNIQQF--KYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLK 759
+ L ++ N ++F ++ EI++L E+ S + + H + E K+REL+
Sbjct: 846 MTSLEEEME--NYRKFIREHEREIEHLKKEMDSV-FEAMKLHRSGKE--EKMRELQ---- 896
Query: 760 QHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEEL-E 818
+ ++ K+E E R HL + L +EF +EEL E
Sbjct: 897 -------EVENRMDELKEEKERLRNHLHQIDLALQETRLKIANLLEEFSGNEEDVEELDE 949
Query: 819 AAIQDNISQA----NSIFFLNQ---NILQEYEHRQRQIEDLSTKQEADKKELKRFLAEID 871
+++ Q N I +L + EYE + + E++ KQ+ D +E KR L EI
Sbjct: 950 EKLEEIYRQIKDLENKIKYLGPVDLTAIDEYEKLREEYEEI-LKQKEDLEEAKRKLEEII 1008
Query: 872 ALKEKWLPTLR-NLVAQINETFSRNFQEMAVAGEVSLD---EHESDFDK-FGILIKVKFR 926
++ +L ++ ++NE+F+R + GE L+ E +S D F I I+ R
Sbjct: 1009 EKTDREAESLLFDVYQRVNESFNRFISLLFFGGEGRLNIVSEAKSILDAGFEISIRKPGR 1068
Query: 927 QSGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLV 986
+ +L +LS GGE+++ + L +L ++ PF V+DE++ +D N + F++L+
Sbjct: 1069 RDQKLSLLS-----GGEKALVGLALLFALMEIKPSPFYVLDEVDSPLDDYNAER-FKRLL 1122
Query: 987 RAASQPNTPQCFLLTPKLLPDLEYSEACSILNIMNG 1022
+ S+ +T Q ++T + +E ++ + ++NG
Sbjct: 1123 KENSK-HT-QFIVITHNKIV-MEAADLLHGVTMVNG 1155
Score = 136 (52.9 bits), Expect = 2.0e-14, Sum P(3) = 2.0e-14
Identities = 70/284 (24%), Positives = 127/284 (44%)
Query: 644 QTEQRLIE--DEAAKLQKEREEIIN---IVQIE----KRKRREMENHINLRKRKLESIEK 694
+TE+++ E DE A L+ E+E + N +VQ E RK + ++ R + +++
Sbjct: 680 ETERQIAEKRDELASLKTEQENLKNQEALVQRELFELSRKSSSTKTVLSEILRSINQLQE 739
Query: 695 E-DDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIR- 752
E +++ L + + LN ++ K EI L + + S E + +E + KI
Sbjct: 740 EVENLEKLLVEYRAKEEGLNARREKIFEEIDELKQNRENLQRSLTE-YSEELEKEKKILD 798
Query: 753 ELE---FNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLE 809
EL F L+ L+ YE KE+ K + R+ E I LE+E
Sbjct: 799 ELNEKIFTLRAEVGNLLETKDRYE---KEMRDTGKMIERIARETEDIKLQMTSLEEEMEN 855
Query: 810 MPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEA---DKKELKRF 866
I E E I+ + +S+F + E + R+++++ + + +K+ L+
Sbjct: 856 YRKFIREHEREIEHLKKEMDSVFEAMKLHRSGKEEKMRELQEVENRMDELKEEKERLRNH 915
Query: 867 LAEID-ALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDE 909
L +ID AL+E L +A + E FS N +++ E L+E
Sbjct: 916 LHQIDLALQETRLK-----IANLLEEFSGNEEDVEELDEEKLEE 954
Score = 130 (50.8 bits), Expect = 1.1e-21, Sum P(4) = 1.1e-21
Identities = 58/279 (20%), Positives = 118/279 (42%)
Query: 44 RLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSIGAYVKRGEES----GYIKISLRG 99
R+ ++GPNGSGKS+++ AI G ++ RA+ + G E+ G + L
Sbjct: 25 RVTAIVGPNGSGKSNIIDAIKWVFGEQSKKELRASEKFDMIFAGSENLPPAGSAYVELVF 84
Query: 100 DTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQFLPQDRVCEFA 159
+ E +T+ R++ ++ ++ NG V ++ + + V+ + Q ++
Sbjct: 85 EENGEEITVARELKRTGENTYYLNGSPVRLKDIRDRFAGTGLGVD-FYSIVGQGQIDRIV 143
Query: 160 KLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTL----NQLKALNV 215
SP +L E+A G + + E L+ + + R D L Q+K+L +
Sbjct: 144 NASPEELRLLLEEAAG---VSIYREKKKETELNLERTKANLDRVKDVLFERERQMKSLYL 200
Query: 216 EQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAEYIXXXXXXXXXXXXXXXXXNTLH 275
+ ++ ER ++ LE+++ + LK + KK E+ L
Sbjct: 201 KAKR-AERFKEYTAQLEELQKIYYGNV-LKRERKKLEFYQEEEKKTNEKIKNIQ--KELV 256
Query: 276 EFSKPIEGKKQEKAILDGDCKKLSSLINENSKRRMDFLE 314
E + E +D + ++ + L+ + KR+ D +E
Sbjct: 257 ELETKWSTLRSEFGEMDQEIERYTKLLEDYKKRQNDLVE 295
Score = 128 (50.1 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 59/248 (23%), Positives = 121/248 (48%)
Query: 658 QKEREEIINIVQIEKRKRREMENHINLRKR---KLESIEKE-DDINTALAKLVDQAADLN 713
Q E + I + KR+R+++E + K+ K+++I+KE ++ T + L + +++
Sbjct: 214 QLEELQKIYYGNVLKRERKKLEFYQEEEKKTNEKIKNIQKELVELETKWSTLRSEFGEMD 273
Query: 714 --IQQFKYAIE-IKNLLVEIVSCKWSYAEKHMAS----IEFDAKIRELEFNLKQHEKLAL 766
I+++ +E K ++V K Y+ K S +E ++ ELE ++++K
Sbjct: 274 QEIERYTKLLEDYKKRQNDLVEMKGFYSSKLADSENKYVELSTRLDELEKRREEYKKRLE 333
Query: 767 QASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNIS 826
+ ++ + E K L +++ E++ + EKEFL + I +LE I +
Sbjct: 334 EMEYIFKGVMGDYERKAKELEKFEKEKENLLSRFNDKEKEFLRVRDEISKLEKQI---LK 390
Query: 827 QANSIFFLNQNILQEYEHRQRQIED--LSTKQEA-DKK----ELKRFLAEIDALKEKWLP 879
N + + + L++ E R++ E+ L+ ++E DKK E+ R + E+D +EK L
Sbjct: 391 LENELLRIGET-LEDLEKRRKITENQILTRRRELEDKKNEFKEISRRVEELDE-EEKKLT 448
Query: 880 TLRNLVAQ 887
N V +
Sbjct: 449 EELNAVRE 456
Score = 94 (38.1 bits), Expect = 3.8e-10, Sum P(3) = 3.8e-10
Identities = 60/260 (23%), Positives = 115/260 (44%)
Query: 646 EQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKL-ESIEKEDDINTALAK 704
EQ + E E ++ ++R+E+ ++ K ++ ++N L +R+L E K T L++
Sbjct: 675 EQEMEETER-QIAEKRDELASL----KTEQENLKNQEALVQRELFELSRKSSSTKTVLSE 729
Query: 705 LVDQAADLNIQQFKYAIE-IKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEK 763
++ +I Q + +E ++ LLVE K I F+ +I EL+ N + ++
Sbjct: 730 ILR-----SINQLQEEVENLEKLLVEY-RAKEEGLNARREKI-FE-EIDELKQNRENLQR 781
Query: 764 LALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQD 823
+ S E KK ++ + + + + ++ EKE + IE + +D
Sbjct: 782 SLTEYSEELEKEKKILDELNEKIFTLRAEVGNLLETKDRYEKEMRDTGKMIERIARETED 841
Query: 824 NISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEA----------DKKELKRFLAEI--- 870
Q S+ +N + +R+IE L + ++ K+E R L E+
Sbjct: 842 IKLQMTSLEEEMENYRKFIREHEREIEHLKKEMDSVFEAMKLHRSGKEEKMRELQEVENR 901
Query: 871 -DALKEKWLPTLRNLVAQIN 889
D LKE+ LRN + QI+
Sbjct: 902 MDELKEE-KERLRNHLHQID 920
Score = 84 (34.6 bits), Expect = 3.8e-09, Sum P(3) = 3.8e-09
Identities = 48/232 (20%), Positives = 103/232 (44%)
Query: 675 RREMENHINLRKRKLESIEKE-DDINTALAKLVDQAADLNIQQFKYAIE---IKNLLVEI 730
R E +++ R+ KL+ +E+E ++ +A+ D+ A L +Q + ++ L E+
Sbjct: 657 REERSSNVFERRIKLKHLEQEMEETERQIAEKRDELASLKTEQENLKNQEALVQRELFEL 716
Query: 731 VSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAK 790
S K S + K + S E I +L+ ++ EKL ++ E E + + + K
Sbjct: 717 -SRK-SSSTKTVLS-EILRSINQLQEEVENLEKLLVEYRAKEEGLNARREKIFEEIDELK 773
Query: 791 RQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQ---NILQEYEHRQR 847
+ E+ L++ E +E+ E I D +++ IF L N+L+ + ++
Sbjct: 774 QNREN-------LQRSLTEYSEELEK-EKKILDELNE--KIFTLRAEVGNLLETKDRYEK 823
Query: 848 QIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEM 899
++ D E +E + ++ +L+E+ + R + + +EM
Sbjct: 824 EMRDTGKMIERIARETEDIKLQMTSLEEE-MENYRKFIREHEREIEHLKKEM 874
Score = 81 (33.6 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 57/256 (22%), Positives = 114/256 (44%)
Query: 648 RLIEDEAAKLQKEREEIINIVQIEKRKRREMEN-HINLRKRKLESIEKE-DDINTALAKL 705
+L+ED +K + +++ + K + EN ++ L R L+ +EK ++ L ++
Sbjct: 281 KLLED----YKKRQNDLVEMKGFYSSKLADSENKYVELSTR-LDELEKRREEYKKRLEEM 335
Query: 706 VDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLA 765
+ + A E++ E + + +K + +I +LE + + E
Sbjct: 336 EYIFKGVMGDYERKAKELEKFEKEKENLLSRFNDKEKEFLRVRDEISKLEKQILKLENEL 395
Query: 766 LQASLHYEDCKK-------EVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELE 818
L+ ED +K ++ R+ L D K + + I+ EL++E E T EEL
Sbjct: 396 LRIGETLEDLEKRRKITENQILTRRRELEDKKNEFKEISRRVEELDEE--EKKLT-EELN 452
Query: 819 AAIQDNISQANS-IFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDAL---K 874
A +++ + + I +N I E R R+I+ E D +E + F + A+ K
Sbjct: 453 A-VRERLEEIEGEIRRVNLEI-DAKEKRLREIQFEKEMIERDMREYRGFSRAVRAVFEEK 510
Query: 875 EKWLPTLRNLVAQINE 890
E++ P L ++V+ + E
Sbjct: 511 ERF-PGLVDVVSNLIE 525
Score = 69 (29.3 bits), Expect = 1.3e-13, Sum P(4) = 1.3e-13
Identities = 49/227 (21%), Positives = 92/227 (40%)
Query: 95 ISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLE-ITKRFNIQVNN-LTQFLP- 151
+S D ++E L + +I K +++ GE LE + KR I N LT+
Sbjct: 364 LSRFNDKEKEFLRVRDEISKLEKQILKLENELLRIGETLEDLEKRRKITENQILTRRREL 423
Query: 152 QDRVCEFAKLSP-VKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQL 210
+D+ EF ++S V+ L+E EK + + V+ L E +++ + + L ++
Sbjct: 424 EDKKNEFKEISRRVEELDEEEKKLTEELNAVRE-RLEEIEGEIRRVNLEIDAKEKRLREI 482
Query: 211 KALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAEYIXXXXXXXXXXXXXXXX 270
+ E+D+ R + + V K++ P L + +
Sbjct: 483 QFEKEMIERDMREYRGFSRAVRAVFEEKERFPGLVDVVSNLIEVDEKYSLAVSVLLGGTA 542
Query: 271 XNTLH---EFSKPI-EGKKQEKA---------ILDGDCKKLSSLINE 304
N + + +K I E KQ +A ++DG ++S L NE
Sbjct: 543 QNIVVRNVDTAKAIVEFLKQNEAGRVTILPLDLIDGSFNRISGLENE 589
Score = 63 (27.2 bits), Expect = 1.1e-21, Sum P(4) = 1.1e-21
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 368 DKIEKLGSQILELGVQANQKRLQKSEK-EKILNQNKLTLRQCSDRLKDMEDKNNK 421
D+I KL QIL+L + L+ E E + + K+T Q R +++EDK N+
Sbjct: 379 DEISKLEKQILKL----ENELLRIGETLEDLEKRRKITENQILTRRRELEDKKNE 429
Score = 59 (25.8 bits), Expect = 1.3e-12, Sum P(4) = 1.3e-12
Identities = 34/154 (22%), Positives = 70/154 (45%)
Query: 89 ESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNL-T 147
E+ Y+++S R D E+ +K + E+ F G + + ++F + NL +
Sbjct: 308 ENKYVELSTRLDELEKRREEYKK--RLEEMEYIFKGVMGDYERKAKELEKFEKEKENLLS 365
Query: 148 QFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTL 207
+F D+ EF ++ + + EK + L +++ L+ L+ +E KR T
Sbjct: 366 RF--NDKEKEFLRVRDE--ISKLEKQI----LKLEN-ELLRIGETLEDLE---KRRKITE 413
Query: 208 NQLKALNVEQEKDVERVRQRAELLEKVESMKKKL 241
NQ+ E E ++ + +E+++ +KKL
Sbjct: 414 NQILTRRRELEDKKNEFKEISRRVEELDEEEKKL 447
Score = 58 (25.5 bits), Expect = 1.6e-12, Sum P(4) = 1.6e-12
Identities = 40/177 (22%), Positives = 82/177 (46%)
Query: 83 YVKRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWF-FNGKVVPKGEVLEITKRFNI 141
Y KR EE YI + GD E + K + ++ FN K + E L +
Sbjct: 328 YKKRLEEMEYIFKGVMGDY-ERKAKELEKFEKEKENLLSRFNDK---EKEFLRVRD---- 379
Query: 142 QVNNLT-QFLPQDRVCEFAKLSPVKLLEETEKA--VGDPQLPVQHCALVEKSSKLKTIEC 198
+++ L Q L + E ++ + LE+ EK + + Q+ + L +K ++ K I
Sbjct: 380 EISKLEKQILKLEN--ELLRIG--ETLEDLEKRRKITENQILTRRRELEDKKNEFKEISR 435
Query: 199 TVKRNGDTLNQL-KALNVEQEK--DVERVRQRAELLEKVESMKKKLPWLKYDMKKAE 252
V+ + +L + LN +E+ ++E +R L ++++ +K+L ++++ + E
Sbjct: 436 RVEELDEEEKKLTEELNAVRERLEEIEGEIRRVNL--EIDAKEKRLREIQFEKEMIE 490
Score = 52 (23.4 bits), Expect = 5.6e-12, Sum P(3) = 5.6e-12
Identities = 26/81 (32%), Positives = 36/81 (44%)
Query: 377 ILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAENIFE 436
+LE + R +K E E L + K L + D L + E + K L+ L+ AE E
Sbjct: 153 LLEEAAGVSIYREKKKETELNLERTKANLDRVKDVLFERE-RQMKSLY-LKAKRAERFKE 210
Query: 437 AYCWLQQHRHELNKEAYGPVL 457
L+ EL K YG VL
Sbjct: 211 YTAQLE----ELQKIYYGNVL 227
Score = 52 (23.4 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 41/211 (19%), Positives = 86/211 (40%)
Query: 368 DKIEKL--GSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHA 425
+ +EKL + E G+ A ++++ + E L QN+ L++ + +K K+L
Sbjct: 742 ENLEKLLVEYRAKEEGLNARREKIFEEIDE--LKQNRENLQRSLTEYSEELEKEKKILDE 799
Query: 426 LRNSGAENIFEAYCWLQ-QHRHELNKEAYGPVLLEVNVSN---RAHANYLEDHVGHYIWK 481
L E L+ + R+E G ++ + + LE+ + +Y +
Sbjct: 800 LNEKIFTLRAEVGNLLETKDRYEKEMRDTGKMIERIARETEDIKLQMTSLEEEMENY--R 857
Query: 482 SFITQDAGDRDFLAKNLKP-FDVPILNYVSNESSRKEPFQISEEMRALGISA-RL-DQVF 538
FI + + + L K + F+ L+ E +E ++ M L RL + +
Sbjct: 858 KFIREHEREIEHLKKEMDSVFEAMKLHRSGKEEKMRELQEVENRMDELKEEKERLRNHLH 917
Query: 539 DAPHAVKEVLISQFGLDSSYIGSKETDQKAD 569
A++E + L + G++E ++ D
Sbjct: 918 QIDLALQETRLKIANLLEEFSGNEEDVEELD 948
Score = 50 (22.7 bits), Expect = 8.9e-12, Sum P(3) = 8.9e-12
Identities = 13/51 (25%), Positives = 24/51 (47%)
Query: 368 DKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDK 418
+ + GS +EL + N + + + + K +N L RLKD+ D+
Sbjct: 70 ENLPPAGSAYVELVFEENGEEITVARELKRTGENTYYLNGSPVRLKDIRDR 120
Score = 48 (22.0 bits), Expect = 2.0e-13, Sum P(4) = 2.0e-13
Identities = 18/68 (26%), Positives = 35/68 (51%)
Query: 187 VEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKY 246
+E+ +KL +E KR D L ++K + D E + EL +++ ++K+ K
Sbjct: 276 IERYTKL--LEDYKKRQND-LVEMKGFYSSKLADSEN--KYVELSTRLDELEKRREEYKK 330
Query: 247 DMKKAEYI 254
+++ EYI
Sbjct: 331 RLEEMEYI 338
Score = 45 (20.9 bits), Expect = 3.0e-20, Sum P(3) = 3.0e-20
Identities = 18/75 (24%), Positives = 33/75 (44%)
Query: 376 QILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAENIF 435
++ EL +++ + SE + +NQ + + L + K L N+ E IF
Sbjct: 712 ELFELSRKSSSTKTVLSEILRSINQLQEEVENLEKLLVEYRAKEEGL-----NARREKIF 766
Query: 436 EAYCWLQQHRHELNK 450
E L+Q+R L +
Sbjct: 767 EEIDELKQNRENLQR 781
Score = 44 (20.5 bits), Expect = 9.4e-20, Sum P(4) = 9.4e-20
Identities = 16/64 (25%), Positives = 29/64 (45%)
Query: 369 KIEKLGSQILELGVQANQKRLQ----KSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLH 424
K++ L ++ E Q +KR + K+E+E + NQ L R+ + + L
Sbjct: 670 KLKHLEQEMEETERQIAEKRDELASLKTEQENLKNQEALVQRELFELSRKSSSTKTVLSE 729
Query: 425 ALRN 428
LR+
Sbjct: 730 ILRS 733
Score = 42 (19.8 bits), Expect = 6.1e-20, Sum P(3) = 6.1e-20
Identities = 14/52 (26%), Positives = 28/52 (53%)
Query: 478 YIWKSFITQDAGDRDFLAKNLKPFDVPILNYVSNESSRKEPF-QISEEMRAL 528
YI+K + GD + AK L+ F+ N +S + +++ F ++ +E+ L
Sbjct: 337 YIFKGVM----GDYERKAKELEKFEKEKENLLSRFNDKEKEFLRVRDEISKL 384
Score = 42 (19.8 bits), Expect = 1.5e-19, Sum P(4) = 1.5e-19
Identities = 9/31 (29%), Positives = 21/31 (67%)
Query: 368 DKIEKLGSQI--LELGVQANQKRLQKSEKEK 396
+++E++ +I + L + A +KRL++ + EK
Sbjct: 456 ERLEEIEGEIRRVNLEIDAKEKRLREIQFEK 486
Score = 41 (19.5 bits), Expect = 1.1e-21, Sum P(4) = 1.1e-21
Identities = 8/41 (19%), Positives = 20/41 (48%)
Query: 506 LNYVSNESSRKEPFQISEEMRALGISARLDQVFDAPHAVKE 546
+N + E E + + G++AR +++F+ +K+
Sbjct: 734 INQLQEEVENLEKLLVEYRAKEEGLNARREKIFEEIDELKQ 774
Score = 41 (19.5 bits), Expect = 7.3e-11, Sum P(3) = 7.3e-11
Identities = 21/96 (21%), Positives = 43/96 (44%)
Query: 367 HDKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHAL 426
++KI+ + +++EL + + R + E ++ + + L R D+ + K ++
Sbjct: 245 NEKIKNIQKELVELETKWSTLRSEFGEMDQEIERYTKLLEDYKKRQNDLVEM--KGFYSS 302
Query: 427 RNSGAENIFEAYCWLQQHRHELNK--EAYGPVLLEV 460
+ + +EN Y L EL K E Y L E+
Sbjct: 303 KLADSEN---KYVELSTRLDELEKRREEYKKRLEEM 335
Score = 37 (18.1 bits), Expect = 4.8e-19, Sum P(4) = 4.8e-19
Identities = 15/49 (30%), Positives = 23/49 (46%)
Query: 387 KRLQKSEKEK--IL---NQNKLTLRQCSDRLKDMEDKNNKLLHALRNSG 430
K L+K EKEK +L N + + D + +E + KL + L G
Sbjct: 351 KELEKFEKEKENLLSRFNDKEKEFLRVRDEISKLEKQILKLENELLRIG 399
>FB|FBgn0039164 [details] [associations]
symbol:CG5524 species:7227 "Drosophila melanogaster"
[GO:0006281 "DNA repair" evidence=ISS] [GO:0000724 "double-strand
break repair via homologous recombination" evidence=IEA]
[GO:0030915 "Smc5-Smc6 complex" evidence=IEA] InterPro:IPR027132
InterPro:IPR003395 Pfam:PF02463 EMBL:AE014297 HSSP:P58301
eggNOG:COG1196 PANTHER:PTHR19306:SF2 GeneTree:ENSGT00550000074816
OMA:CANEANY EMBL:BT023747 RefSeq:NP_651228.1 UniGene:Dm.16547
SMR:Q9VCB8 IntAct:Q9VCB8 EnsemblMetazoa:FBtr0084573 GeneID:42876
KEGG:dme:Dmel_CG5524 UCSC:CG5524-RA FlyBase:FBgn0039164
InParanoid:Q9VCB8 OrthoDB:EOG42Z354 GenomeRNAi:42876 NextBio:831043
Uniprot:Q9VCB8
Length = 1122
Score = 198 (74.8 bits), Expect = 1.1e-20, Sum P(3) = 1.1e-20
Identities = 74/242 (30%), Positives = 114/242 (47%)
Query: 21 GNIIEIELHNFMTFDHLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI 80
G +I + L NFM +L + G +N ++G NGSGKS+++ A+AL L + RA+SI
Sbjct: 97 GKVISMRLTNFMCHSNLFIEFGPNINFLVGNNGSGKSAVITALALGLTSSARATNRASSI 156
Query: 81 GAYVKRGEESGYIKISL--------RGDTKEEHLTIMRKIDTRNKSEWF----FNGKVVP 128
+K GE S I I+L + D HLT++R+I R+ S + GK V
Sbjct: 157 QKLIKNGEVSATISITLSNSGLRPFKADIFGPHLTVVRQI--RHSSSTYDLQDARGKSVS 214
Query: 129 KGEVLEITKR---FNIQVNNLTQFLPQDRVCEFAK-LSPVKLLEETEKAVGDPQLPVQHC 184
K +V +I + F I V N L Q+ EF K L P + KA QL V
Sbjct: 215 K-KVSDIRRMLLCFGINVENPIFVLNQEAAREFLKELEPASNYKLLMKAT---QLDVCTS 270
Query: 185 ALVEKSSKLK--TIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLP 242
+L E + + T E + +K + E+EK + + + + E ++ K KL
Sbjct: 271 SLTECHALRRHFTQELEQLEKKKEM-MIKHIAAEEEK-LSILEDKEMVKENLQQCKTKLA 328
Query: 243 WL 244
W+
Sbjct: 329 WM 330
Score = 149 (57.5 bits), Expect = 1.1e-20, Sum P(3) = 1.1e-20
Identities = 88/377 (23%), Positives = 165/377 (43%)
Query: 646 EQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKL 705
+ + + + K+ ++ +I Q + R ++ M+ + L+ + + + D + + LA
Sbjct: 745 QHKKVLENTQKVISQKSTMIG--QHQSRNQKAMQKIMELQNFDYQELPEYDRLKSHLADS 802
Query: 706 VDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLA 765
++ +++ ++ ++ + + AE+ A + K+ L+ + E
Sbjct: 803 GEKIEKCRLEREMLQEKLLSIQHRQTELESTEAEERRALEGINKKLTALDTEAGEVESKM 862
Query: 766 LQASLHYED----CKKEVEHCRKHLSDAKRQAESIAFITPELEK--EFLEMPTTIEELEA 819
LHYE+ +K ++ RK L + + + E EK EF+ T E++
Sbjct: 863 RSLDLHYEENTRRFQKTLQLERKMLGEKETVLSELEKARTEAEKLGEFIATTQTEEKIRE 922
Query: 820 AIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELK-RFLAEIDALKEKWL 878
AI S+ + LN N E +R + +L D+ EL+ R LA +D++ +K
Sbjct: 923 AISRYKSKIKQVEELNYNP----EELERGLAELR-----DELELQSRHLAVVDSVVKK-- 971
Query: 879 PTLRNLVAQINETFSRN---------FQ-EMAVA-GEVSLDEHESDFDKFGILIKVKFRQ 927
LR Q + F R+ FQ E A+A + + SD +K I V F
Sbjct: 972 --LRMAYHQRAQLFQRSRHHYFTMVQFQFEQALAMRQFKVSFETSDKEKTW-KINV-FPP 1027
Query: 928 SGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVR 987
SG E + SGGERS +T+ L L ++ PF +DE + D +N + + + L+
Sbjct: 1028 SGN-ETSNTRSLSGGERSFTTVSLLKGLWSTSDHPFYFLDEYDVFTDEVNRKFITEILIG 1086
Query: 988 AASQPNTPQ-CFLLTPK 1003
+ + Q CFL TP+
Sbjct: 1087 EGLEWLSRQYCFL-TPQ 1102
Score = 102 (41.0 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 55/257 (21%), Positives = 118/257 (45%)
Query: 669 QIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAADLNIQQFKYAIEIKNL-- 726
Q+EK+K M HI + KL +E ++ + L + + A + + Y E+ NL
Sbjct: 288 QLEKKKEM-MIKHIAAEEEKLSILEDKEMVKENLQQCKTKLAWMAVTS--YQNELNNLEH 344
Query: 727 ---LVEI--VSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYEDCKKEVEH 781
L+E S + + ++K + K++E F +++ LA Q ++D + ++
Sbjct: 345 SIKLIENKKASLEQTTSKKESTQATMNQKLKE--FEASKNQILATQK---FQD--ERLKT 397
Query: 782 CRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQE 841
+K + D +A + E+ E + +E E I + + N + + +
Sbjct: 398 AKKAVQDLLLEASQVKAKIGNAERRMREDQRSYDECEKLIGNYHADFNRVNEQREENANK 457
Query: 842 YEHRQRQI---EDLSTKQEADKKELKRFLAEI----DALKEKWLP---TLRNLVAQINET 891
E ++Q+ E++ + A+++E+KR + + DA+K + + +N+ +I E
Sbjct: 458 IEMLKKQVVKSEEIIAQLRAEQQEIKRDITSVQERLDAVKNGRIQLHKSKQNISWEI-EA 516
Query: 892 FSRN-FQEMAVAGEVSL 907
SRN +++V GE ++
Sbjct: 517 LSRNKSNKLSVYGEQTI 533
Score = 69 (29.3 bits), Expect = 1.2e-12, Sum P(4) = 1.2e-12
Identities = 37/178 (20%), Positives = 77/178 (43%)
Query: 748 DAKIRELEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAK--------RQAESIAFI 799
D +IR+L+ ++ + Y KK +E+ +K +S R +++ I
Sbjct: 719 DDRIRQLQMEQSDLQEKEPSLEIDYMQHKKVLENTQKVISQKSTMIGQHQSRNQKAMQKI 778
Query: 800 TPELEK-EFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQE----YEHRQRQIEDLST 854
EL+ ++ E+P + L++ + D+ + L + +LQE +HRQ ++E
Sbjct: 779 M-ELQNFDYQELPE-YDRLKSHLADSGEKIEKCR-LEREMLQEKLLSIQHRQTELESTEA 835
Query: 855 KQEADKKELKRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHES 912
++ + + + L +D + +R+L E +R FQ+ L E E+
Sbjct: 836 EERRALEGINKKLTALDTEAGEVESKMRSLDLHYEEN-TRRFQKTLQLERKMLGEKET 892
Score = 63 (27.2 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 35/182 (19%), Positives = 78/182 (42%)
Query: 651 EDEAAKLQKEREEIINIVQIEKRKRREM-----ENHINLRKRKLESIE-KEDDINTALAK 704
E+E + +++E + +Q K K M +N +N + ++ IE K+ + +K
Sbjct: 303 EEEKLSILEDKEMVKENLQQCKTKLAWMAVTSYQNELNNLEHSIKLIENKKASLEQTTSK 362
Query: 705 LVDQAADLNIQQFKYAIEIKNLLV---EIVSCKWSYAEKHMASIEFDAKIRELEFNLKQH 761
A +N Q+ K KN ++ + + A+K + + +A +++ +
Sbjct: 363 KESTQATMN-QKLKEFEASKNQILATQKFQDERLKTAKKAVQDLLLEAS--QVKAKIGNA 419
Query: 762 EKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAI 821
E+ + Y++C+K + + + Q E A L+K+ ++ I +L A
Sbjct: 420 ERRMREDQRSYDECEKLIGNYHADFNRVNEQREENANKIEMLKKQVVKSEEIIAQLRAEQ 479
Query: 822 QD 823
Q+
Sbjct: 480 QE 481
Score = 59 (25.8 bits), Expect = 4.9e-07, Sum P(2) = 4.9e-07
Identities = 16/82 (19%), Positives = 42/82 (51%)
Query: 168 EETEKAVGDPQLPVQHC--ALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVR 225
+E EK +G+ E ++K++ ++ V ++ + + QL+A E ++D+ V+
Sbjct: 431 DECEKLIGNYHADFNRVNEQREENANKIEMLKKQVVKSEEIIAQLRAEQQEIKRDITSVQ 490
Query: 226 QRAELLE----KVESMKKKLPW 243
+R + ++ ++ K+ + W
Sbjct: 491 ERLDAVKNGRIQLHKSKQNISW 512
Score = 45 (20.9 bits), Expect = 1.2e-12, Sum P(4) = 1.2e-12
Identities = 16/63 (25%), Positives = 35/63 (55%)
Query: 656 KLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAADLNIQ 715
++ ++REE N +IE K++ +++ + + + E E + DI T++ + +D + IQ
Sbjct: 446 RVNEQREENAN--KIEMLKKQVVKSEEIIAQLRAEQQEIKRDI-TSVQERLDAVKNGRIQ 502
Query: 716 QFK 718
K
Sbjct: 503 LHK 505
Score = 42 (19.8 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 16/80 (20%), Positives = 35/80 (43%)
Query: 368 DKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHA-- 425
D+I +L + +L + + + +K+L + + Q S + + +N K +
Sbjct: 720 DRIRQLQMEQSDLQEKEPSLEIDYMQHKKVLENTQKVISQKSTMIGQHQSRNQKAMQKIM 779
Query: 426 -LRNSGAENIFEAYCWLQQH 444
L+N + + E Y L+ H
Sbjct: 780 ELQNFDYQELPE-YDRLKSH 798
Score = 40 (19.1 bits), Expect = 1.1e-20, Sum P(3) = 1.1e-20
Identities = 8/34 (23%), Positives = 19/34 (55%)
Query: 390 QKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLL 423
+K+ E+ ++ + T + +LK+ E N++L
Sbjct: 352 KKASLEQTTSKKESTQATMNQKLKEFEASKNQIL 385
>TAIR|locus:2160289 [details] [associations]
symbol:SMC6A "structural maintenance of chromosomes 6A"
species:3702 "Arabidopsis thaliana" [GO:0000155 "phosphorelay
sensor kinase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0005694 "chromosome" evidence=IEA] [GO:0007059 "chromosome
segregation" evidence=ISS] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0051276
"chromosome organization" evidence=IEA] [GO:0000724 "double-strand
break repair via homologous recombination" evidence=IMP]
[GO:0007062 "sister chromatid cohesion" evidence=IMP] [GO:0010165
"response to X-ray" evidence=IMP] [GO:0006261 "DNA-dependent DNA
replication" evidence=RCA] [GO:0006306 "DNA methylation"
evidence=RCA] [GO:0006346 "methylation-dependent chromatin
silencing" evidence=RCA] [GO:0007267 "cell-cell signaling"
evidence=RCA] [GO:0009616 "virus induced gene silencing"
evidence=RCA] [GO:0010267 "production of ta-siRNAs involved in RNA
interference" evidence=RCA] [GO:0031047 "gene silencing by RNA"
evidence=RCA] [GO:0031048 "chromatin silencing by small RNA"
evidence=RCA] [GO:0035196 "production of miRNAs involved in gene
silencing by miRNA" evidence=RCA] [GO:0048451 "petal formation"
evidence=RCA] [GO:0048453 "sepal formation" evidence=RCA]
[GO:0051567 "histone H3-K9 methylation" evidence=RCA]
InterPro:IPR003661 InterPro:IPR027132 SMART:SM00388
InterPro:IPR003395 Pfam:PF02463 EMBL:CP002688 GO:GO:0016020
HSSP:P58301 GO:GO:0023014 GO:GO:0000724 GO:GO:0000155 GO:GO:0000160
GO:GO:0010165 GO:GO:0007062 EMBL:AB010070 PANTHER:PTHR19306:SF2
HOGENOM:HOG000030109 ProtClustDB:CLSN2686921 IPI:IPI00521865
RefSeq:NP_196383.1 UniGene:At.32690 ProteinModelPortal:Q9FLR5
SMR:Q9FLR5 PRIDE:Q9FLR5 EnsemblPlants:AT5G07660.1 GeneID:830659
KEGG:ath:AT5G07660 TAIR:At5g07660 InParanoid:Q9FLR5 OMA:INEMTIR
PhylomeDB:Q9FLR5 ArrayExpress:Q9FLR5 Genevestigator:Q9FLR5
Uniprot:Q9FLR5
Length = 1058
Score = 166 (63.5 bits), Expect = 2.4e-20, Sum P(3) = 2.4e-20
Identities = 94/384 (24%), Positives = 173/384 (45%)
Query: 643 MQTEQRLIEDEAAKLQKEREEIINIVQIE-KRKRREMENHINLRKRKLES-IEKEDDINT 700
++ ++ +E + + + E +++ N V E K N ++L K + IE+++ +
Sbjct: 679 LKKQRTQLEKDLTRKELEMQDLKNSVASETKASPTSSVNELHLEIMKFQKEIEEKESL-- 736
Query: 701 ALAKLVD--QAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNL 758
L KL D + A+L + K + E NL E + EK E + K +E E +
Sbjct: 737 -LEKLQDSLKEAELKANELKASYE--NLY-ESAKGEIEALEK----AEDELKEKEDELHS 788
Query: 759 KQHEKLALQASLHYEDCKKE--------VEHCRKHLSDAKRQAES--IAFITPELEKEFL 808
+ EK HYED K+ E K L + KRQ + + I PE E + L
Sbjct: 789 AETEKN------HYEDIMKDKVLPEIKQAETIYKEL-EMKRQESNKKASIICPESEIKAL 841
Query: 809 ---EMPTTIEELEAAIQD---NISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKE 862
+ PT ++ L A I + + N + + + L+ H +++ + + K++ K
Sbjct: 842 GPWDGPTPLQ-LSAQINKINHRLKRENENYSESIDDLR-IMHGEKE-QKIGKKRKTYKSC 898
Query: 863 LKRFLAEIDALKEKWLPTLRN---LVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGI 919
++ DA+ +W RN L ++ F+ + + ++G + + +E DK +
Sbjct: 899 REKLKVCKDAVDSRWNKLQRNKDLLKRELTWQFNHHLGKKGISGNIRVS-YE---DKT-L 953
Query: 920 LIKVKFRQSG-QLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINE 978
I+VK Q V SGGERS ST+ + ++LQ++T P R +DE + MD ++
Sbjct: 954 SIEVKMPQDATNSAVRDTRGLSGGERSFSTLCFTLALQNMTEAPIRAMDEFDVFMDAVSR 1013
Query: 979 RKMFQQLVRAASQPNTPQCFLLTP 1002
+ L+ A + + Q +TP
Sbjct: 1014 KISLDTLIDFALKQGS-QWMFITP 1036
Score = 163 (62.4 bits), Expect = 2.4e-20, Sum P(3) = 2.4e-20
Identities = 66/247 (26%), Positives = 115/247 (46%)
Query: 21 GNIIEIELHNFMTFDHLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI 80
G I+ I L NFM +L + G +N + G NGSGKS+++ A+ +A G + RA ++
Sbjct: 21 GKILRIRLENFMCHSNLEIEFGDWVNFITGQNGSGKSAILTALCVAFGCRARGTQRAATL 80
Query: 81 GAYVKRGEESG--YIKISLRGDT--KEE----HLTIMRKIDTRNKSEWF--FNGKVVP-- 128
++K G Y+++ +G+ K E L I R+I G+ +
Sbjct: 81 KDFIKTGCSYALVYVELKNQGEDAFKPEIYGDTLIIERRISDSTSLTVLKDHQGRKISSR 140
Query: 129 KGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVE 188
K E+ E+ + +NI V N + QD+ EF K + K L Q +++
Sbjct: 141 KEELRELVEHYNIDVENPCVIMSQDKSREFLHSGNDK---DKFKFFYKATLLQQVDDILQ 197
Query: 189 K-SSKLKTIECTVKRNGDTLNQL-KALN--VEQEKDVERVRQRAELLEKVESMKKKLPWL 244
+KL + + T+ + K +N +E+ K++E V E+ ++V +KKKL W
Sbjct: 198 SIGTKLNSANALLDEMEKTIKPIEKEINELLEKIKNMEHVE---EITQQVLHLKKKLAWS 254
Query: 245 -KYDMKK 250
YD+ +
Sbjct: 255 WVYDVDR 261
Score = 90 (36.7 bits), Expect = 2.2e-14, Sum P(3) = 2.2e-14
Identities = 44/187 (23%), Positives = 79/187 (42%)
Query: 703 AKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHE 762
A DQ DL I+ + EI+ C+ E M ++ +R L+ Q E
Sbjct: 635 ASFDDQIKDLEIEASREQSEIQE-------CRGQKREAEMNLEGLESTMRRLKKQRTQLE 687
Query: 763 KLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQ 822
K + L +D K V K + + + +KE E + +E+L+ +++
Sbjct: 688 KDLTRKELEMQDLKNSVASETK--ASPTSSVNELHLEIMKFQKEIEEKESLLEKLQDSLK 745
Query: 823 DNISQANSIFFLNQNILQEYEHRQRQIEDLS-TKQEADKKELKRFLAEI------DALKE 875
+ +AN + +N+ YE + +IE L + E +KE + AE D +K+
Sbjct: 746 EAELKANELKASYENL---YESAKGEIEALEKAEDELKEKEDELHSAETEKNHYEDIMKD 802
Query: 876 KWLPTLR 882
K LP ++
Sbjct: 803 KVLPEIK 809
Score = 75 (31.5 bits), Expect = 4.9e-11, Sum P(3) = 4.9e-11
Identities = 43/177 (24%), Positives = 73/177 (41%)
Query: 659 KEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAADLNIQQFK 718
++RE +N+ +E RR + L K + D+ ++A + ++ +
Sbjct: 661 QKREAEMNLEGLESTMRRLKKQRTQLEKDLTRKELEMQDLKNSVASETKASPTSSVNELH 720
Query: 719 YAIEIKNLLVEIVSCKWSYAEKHMASI-EFDAKIRELEF---NLKQHEKLALQASLHYED 774
+EI EI K S EK S+ E + K EL+ NL + K ++A ED
Sbjct: 721 --LEIMKFQKEIEE-KESLLEKLQDSLKEAELKANELKASYENLYESAKGEIEALEKAED 777
Query: 775 CKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSI 831
KE E K E I + ++ E + T +ELE Q++ +A+ I
Sbjct: 778 ELKEKEDELHSAETEKNHYEDI--MKDKVLPEIKQAETIYKELEMKRQESNKKASII 832
Score = 75 (31.5 bits), Expect = 3.2e-10, Sum P(2) = 3.2e-10
Identities = 38/152 (25%), Positives = 68/152 (44%)
Query: 722 EIKNLLVEIVSCKWSYAEK--HMASI--EFDAKIRELEF---NLKQ--HEKLALQASLHY 772
+I L E+ S + S EK +A + E A RELE ++K+ EK+AL+ H+
Sbjct: 283 KIDRKLGEVESLRVSLTEKKAQVACLIDESTAMKRELECLRQSMKKAAREKIALEEEYHH 342
Query: 773 EDCKKEVEHCRKHLSDAKRQAESIAFIT--------PELEKEFLEMPTTIEELEAAIQDN 824
+ C ++ + + +RQ E I +T E+E + ++ +E+ E+ +
Sbjct: 343 K-CSN-IQKIKDRVRRLERQIEDINEMTIRSTQVEQSEIEGKLNQLTVEVEKAESLVSSL 400
Query: 825 ISQANSIFFLNQNILQEYEHRQRQIEDLSTKQ 856
+ N + +E EH + I D KQ
Sbjct: 401 KEEENMVMEKASAGGKEKEHIEEMIRDHEKKQ 432
Score = 73 (30.8 bits), Expect = 2.2e-14, Sum P(3) = 2.2e-14
Identities = 14/51 (27%), Positives = 32/51 (62%)
Query: 643 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHIN-LRKRKLESI 692
++ E+ ++ ++A+ KE+E I +++ ++K+R M HIN L+K + +
Sbjct: 400 LKEEENMVMEKASAGGKEKEHIEEMIRDHEKKQRNMNAHINDLKKHQTNKV 450
Score = 66 (28.3 bits), Expect = 1.9e-10, Sum P(3) = 1.9e-10
Identities = 22/76 (28%), Positives = 41/76 (53%)
Query: 176 DPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVE 235
D QL Q+ +V+ ++ T + + R L ++++L V E+ Q A L+++
Sbjct: 260 DRQLKEQNEKIVKFKERVPTCQNKIDRK---LGEVESLRVSL---TEKKAQVACLIDEST 313
Query: 236 SMKKKLPWLKYDMKKA 251
+MK++L L+ MKKA
Sbjct: 314 AMKRELECLRQSMKKA 329
Score = 60 (26.2 bits), Expect = 2.4e-11, Sum P(3) = 2.4e-11
Identities = 36/201 (17%), Positives = 81/201 (40%)
Query: 747 FDAKIRELEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKE 806
FD +I++LE + + + + + +E + K+Q + E E
Sbjct: 637 FDDQIKDLEIEASREQSEIQECRGQKREAEMNLEGLESTMRRLKKQRTQLEKDLTRKELE 696
Query: 807 FLEMPTTI-EELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKR 865
++ ++ E +A+ ++++ + Q ++E E +++D + E ELK
Sbjct: 697 MQDLKNSVASETKASPTSSVNELHLEIMKFQKEIEEKESLLEKLQDSLKEAELKANELK- 755
Query: 866 FLAEIDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKF 925
A + L E + L +E + E+ A E + +E D K +L ++K
Sbjct: 756 --ASYENLYESAKGEIEALEKAEDELKEKE-DELHSA-ETEKNHYE-DIMKDKVLPEIKQ 810
Query: 926 RQSGQLEVLSAHHQSGGERSV 946
++ E+ +S + S+
Sbjct: 811 AETIYKELEMKRQESNKKASI 831
Score = 59 (25.8 bits), Expect = 6.3e-10, Sum P(3) = 6.3e-10
Identities = 36/140 (25%), Positives = 68/140 (48%)
Query: 652 DEAAKLQKEREEIINIVQIEKRKRREME---NH--INLRKRK--LESIEKE-DDIN--TA 701
DE+ +++E E + ++ R++ +E +H N++K K + +E++ +DIN T
Sbjct: 310 DESTAMKRELECLRQSMKKAAREKIALEEEYHHKCSNIQKIKDRVRRLERQIEDINEMTI 369
Query: 702 LAKLVDQAA-DLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDA--KIRE-LEFN 757
+ V+Q+ + + Q +E LV S K E++M + A K +E +E
Sbjct: 370 RSTQVEQSEIEGKLNQLTVEVEKAESLVS--SLK---EEENMVMEKASAGGKEKEHIEEM 424
Query: 758 LKQHEKLALQASLHYEDCKK 777
++ HEK + H D KK
Sbjct: 425 IRDHEKKQRNMNAHINDLKK 444
Score = 59 (25.8 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 26/99 (26%), Positives = 45/99 (45%)
Query: 364 EPPHDKIEKLGSQILELGVQANQ-----KRLQKSEKEKI--LNQNKLTLRQCSDRLKDME 416
E +EKL + E ++AN+ + L +S K +I L + + L++ D L E
Sbjct: 731 EEKESLLEKLQDSLKEAELKANELKASYENLYESAKGEIEALEKAEDELKEKEDELHSAE 790
Query: 417 DKNNKLLHALRNSGAENIFEA---YCWLQQHRHELNKEA 452
+ N +++ I +A Y L+ R E NK+A
Sbjct: 791 TEKNHYEDIMKDKVLPEIKQAETIYKELEMKRQESNKKA 829
Score = 58 (25.5 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 15/64 (23%), Positives = 31/64 (48%)
Query: 388 RLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAENIFEAYCWLQQHRHE 447
R+ EKE+ + + + T + C ++LK +D + + L+ + + + W Q H
Sbjct: 878 RIMHGEKEQKIGKKRKTYKSCREKLKVCKDAVDSRWNKLQRN-KDLLKRELTW--QFNHH 934
Query: 448 LNKE 451
L K+
Sbjct: 935 LGKK 938
Score = 55 (24.4 bits), Expect = 2.4e-20, Sum P(3) = 2.4e-20
Identities = 13/66 (19%), Positives = 33/66 (50%)
Query: 368 DKIEKLGSQILELG-VQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHAL 426
D++ +L QI ++ + ++++SE E LNQ + + + + ++++ N ++
Sbjct: 352 DRVRRLERQIEDINEMTIRSTQVEQSEIEGKLNQLTVEVEKAESLVSSLKEEENMVMEKA 411
Query: 427 RNSGAE 432
G E
Sbjct: 412 SAGGKE 417
Score = 50 (22.7 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 14/53 (26%), Positives = 28/53 (52%)
Query: 385 NQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAENIFEA 437
N+ L+ + +K + + + L + D LK+ E K N+L + EN++E+
Sbjct: 717 NELHLEIMKFQKEIEEKESLLEKLQDSLKEAELKANEL-----KASYENLYES 764
Score = 45 (20.9 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 17/83 (20%), Positives = 34/83 (40%)
Query: 163 PVKLLEETEKAVGDPQLPV--QHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKD 220
P +L + + D ++ + + E + + E ++ T+ +LK + EKD
Sbjct: 630 PTRLCASFDDQIKDLEIEASREQSEIQECRGQKREAEMNLEGLESTMRRLKKQRTQLEKD 689
Query: 221 VERVR-QRAELLEKVESMKKKLP 242
+ R + +L V S K P
Sbjct: 690 LTRKELEMQDLKNSVASETKASP 712
Score = 44 (20.5 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 12/84 (14%), Positives = 38/84 (45%)
Query: 370 IEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDME---DKNNKLLHAL 426
++++ + +G + N E EK + + + + +++K+ME + ++LH
Sbjct: 189 LQQVDDILQSIGTKLNSANALLDEMEKTIKPIEKEINELLEKIKNMEHVEEITQQVLHLK 248
Query: 427 RNSGAENIFEAYCWLQQHRHELNK 450
+ +++ L++ ++ K
Sbjct: 249 KKLAWSWVYDVDRQLKEQNEKIVK 272
Score = 44 (20.5 bits), Expect = 1.2e-06, Sum P(3) = 1.2e-06
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 451 EAYGPVLL-EVNVSNRAHANYLEDHVGHYI 479
E YG L+ E +S+ L+DH G I
Sbjct: 108 EIYGDTLIIERRISDSTSLTVLKDHQGRKI 137
Score = 42 (19.8 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 13/52 (25%), Positives = 27/52 (51%)
Query: 192 KLKTIECTVKRNGDTLNQL--KALNVEQEKDVERVRQRAELLEKVESMKKKL 241
K+K ++R + +N++ ++ VEQ + ++ Q +EK ES+ L
Sbjct: 349 KIKDRVRRLERQIEDINEMTIRSTQVEQSEIEGKLNQLTVEVEKAESLVSSL 400
Score = 39 (18.8 bits), Expect = 1.2e-06, Sum P(3) = 1.2e-06
Identities = 11/55 (20%), Positives = 24/55 (43%)
Query: 492 DFLAKNLKPFDVPILNYVSNESSRKEPFQISEEMRALGISARLDQVFDAPHAVKE 546
D + K +KP + I + + + +I++++ L V+D +KE
Sbjct: 211 DEMEKTIKPIEKEINELLEKIKNMEHVEEITQQVLHLKKKLAWSWVYDVDRQLKE 265
>POMBASE|SPCC5E4.06 [details] [associations]
symbol:smc6 "Smc5-6 complex SMC subunit Smc6"
species:4896 "Schizosaccharomyces pombe" [GO:0000724 "double-strand
break repair via homologous recombination" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IC;IDA]
[GO:0006281 "DNA repair" evidence=IMP] [GO:0006974 "response to DNA
damage stimulus" evidence=IMP] [GO:0030915 "Smc5-Smc6 complex"
evidence=IDA] [GO:0046982 "protein heterodimerization activity"
evidence=IPI] [GO:0048478 "replication fork protection"
evidence=IC] InterPro:IPR027132 PomBase:SPCC5E4.06
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0005634
GO:GO:0007126 EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0000724
GO:GO:0048478 eggNOG:COG1196 GO:GO:0030915 EMBL:X80929
PANTHER:PTHR19306:SF2 PIR:T41457 RefSeq:NP_587906.1
ProteinModelPortal:P53692 IntAct:P53692 STRING:P53692 PRIDE:P53692
EnsemblFungi:SPCC5E4.06.1 GeneID:2539020 KEGG:spo:SPCC5E4.06
OMA:FVIGHNG OrthoDB:EOG486CMM NextBio:20800194 Uniprot:P53692
Length = 1140
Score = 180 (68.4 bits), Expect = 4.8e-19, Sum P(4) = 4.8e-19
Identities = 70/237 (29%), Positives = 112/237 (47%)
Query: 23 IIE-IELHNFMTFDHLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSIG 81
+IE I L NFM D L G R+N VIG NGSGKS+++ + + LG RA ++
Sbjct: 96 VIECIHLVNFMCHDSLKINFGPRINFVIGHNGSGKSAILTGLTICLGAKASNTNRAPNMK 155
Query: 82 AYVKRGEESGYIKISL--RG------DTKEEHLTIMRKIDTRNKSEW---FFNGKVVP-- 128
+ VK+G+ I +++ RG + + +TI R I SE+ FNG V+
Sbjct: 156 SLVKQGKNYARISVTISNRGFEAYQPEIYGKSITIERTIRREGSSEYRLRSFNGTVISTK 215
Query: 129 KGEVLEITKRFNIQVNNLTQFLPQDRVCEF-AKLSPVKLLEETEKAVGDPQLPVQHCALV 187
+ E+ I +Q++N L QD +F SP + + K + QL ++ +L+
Sbjct: 216 RDELDNICDHMGLQIDNPMNILTQDTARQFLGNSSPKEKYQLFMKGIQLKQLE-ENYSLI 274
Query: 188 EKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDV-ERVRQRAELLEKVESMKKKLPW 243
E+S + T V N T A E+ K + E+ R+ L +E K ++ W
Sbjct: 275 EQSL-INTKN--VLGNKKTGVSYLAKKEEEYKLLWEQSRETENLHNLLEQKKGEMVW 328
Score = 141 (54.7 bits), Expect = 4.8e-19, Sum P(4) = 4.8e-19
Identities = 75/381 (19%), Positives = 173/381 (45%)
Query: 653 EAAKLQKEREEIINIVQ-IEKR---KRREMEN----HIN-LRKRKLESIEKE-DDINTAL 702
E AK +++ + ++ ++ I+KR KRRE+ + ++ L K++++E+ + L
Sbjct: 742 EQAKFKRDEQLLVEKIEGIKKRILLKRREVNSLESQELSVLDTEKIQTLERRISETEKEL 801
Query: 703 AKLVDQAADLNIQQFKYAIEIKNLLVEI--VSCKWSYAEKHMASIEFD-AKIRE----LE 755
Q D ++ + + ++ EI K + ++S++ + +++R+ E
Sbjct: 802 ESYAGQLQDAKNEEHRIRDNQRPVIEEIRIYREKIQTETQRLSSLQTELSRLRDEKRNSE 861
Query: 756 FNLKQHEKLALQAS--LHYEDCKKEVEHCRKHLSD----AKRQAESIAF-ITP-ELEKEF 807
++++H + + L ++ KK V+ C + ++D A + E + ++P EL+ E
Sbjct: 862 VDIERHRQTVESCTNILREKEAKK-VQ-CAQVVADYTAKANTRCERVPVQLSPAELDNEI 919
Query: 808 LEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFL 867
+ I E ++ QA + N ++++ + + L+ +A ++ L+R
Sbjct: 920 ERLQMQIAEWRNRTGVSVEQAAEDYL---NAKEKHDQAKVLVARLTQLLQALEETLRR-- 974
Query: 868 AEIDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGIL-----IK 922
E W + + + E F + G++ + +H+ +F + + +
Sbjct: 975 -----RNEMWTKFRKLITLRTKELFELYLSQRNFTGKLVI-KHQEEFLEPRVYPANRNLA 1028
Query: 923 VKFRQSGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMF 982
+ + +V S SGGE+S +TI L+S+ + +CP R +DE + MD +N
Sbjct: 1029 TAHNRHEKSKV-SVQGLSGGEKSFATICMLLSIWEAMSCPLRCLDEFDVFMDAVNRLVSI 1087
Query: 983 QQLVRAASQPNTPQCFLLTPK 1003
+ +V +A + Q +TP+
Sbjct: 1088 KMMVDSAKDSSDKQFIFITPQ 1108
Score = 56 (24.8 bits), Expect = 8.0e-06, Sum P(3) = 8.0e-06
Identities = 18/65 (27%), Positives = 32/65 (49%)
Query: 177 PQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVES 236
P++ +E K+ ++ K+ NQL +EQ K +R Q L+EK+E
Sbjct: 705 PRIGFSSSTSIEAEKKI--LDDLKKQYNFASNQLNEAKIEQAK-FKRDEQL--LVEKIEG 759
Query: 237 MKKKL 241
+KK++
Sbjct: 760 IKKRI 764
Score = 55 (24.4 bits), Expect = 8.9e-10, Sum P(3) = 8.9e-10
Identities = 34/148 (22%), Positives = 68/148 (45%)
Query: 776 KKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIFFLN 835
+KE +H LS+AK ESI +++ + ++ EE+ + S F
Sbjct: 342 EKEFQHAEVKLSEAKENLESIVTNQSDIDGKI----SSKEEVIGRAKGETDTTKSKF--- 394
Query: 836 QNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLR----NLV-AQINE 890
++I++ ++ + ++ D+ ++ + + + +D +E+ L T R NL +QI +
Sbjct: 395 EDIVKTFDGYRSEMNDVDIQKRDIQNSINAAKSCLDVYREQ-LNTERARENNLGGSQIEK 453
Query: 891 TF--SRNFQ-EMAVAGE--VSLDEHESD 913
S N Q E+A E V L+ +D
Sbjct: 454 RANESNNLQREIADLSEQIVELESKRND 481
Score = 51 (23.0 bits), Expect = 4.8e-10, Sum P(4) = 4.8e-10
Identities = 26/99 (26%), Positives = 52/99 (52%)
Query: 643 MQTE-QRL--IEDEAAKLQKEREEIINIVQIEKRKRREMENHIN-LRKRKLESIEKEDDI 698
+QTE QRL ++ E ++L+ E+ + V IE R R+ +E+ N LR+++ + ++ +
Sbjct: 836 IQTETQRLSSLQTELSRLRDEKRN--SEVDIE-RHRQTVESCTNILREKEAKKVQCAQVV 892
Query: 699 NTALAKLVDQAADLNIQQFKYAI--EIKNLLVEIVSCKW 735
AK + + +Q + EI+ L ++I +W
Sbjct: 893 ADYTAKANTRCERVPVQLSPAELDNEIERLQMQIA--EW 929
Score = 51 (23.0 bits), Expect = 2.2e-09, Sum P(3) = 2.2e-09
Identities = 11/51 (21%), Positives = 28/51 (54%)
Query: 368 DKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDK 418
+KI+ ++ L + ++ R +K E + +++ T+ C++ L++ E K
Sbjct: 834 EKIQTETQRLSSLQTELSRLRDEKRNSEVDIERHRQTVESCTNILREKEAK 884
Score = 50 (22.7 bits), Expect = 4.8e-19, Sum P(4) = 4.8e-19
Identities = 15/51 (29%), Positives = 26/51 (50%)
Query: 383 QANQKRLQKSEKEKILNQNKLTLRQCSD---RLKDMEDKNNKLLHALRNSG 430
+A + L S+ EK N++ R+ +D ++ ++E K N L AL G
Sbjct: 440 RARENNLGGSQIEKRANESNNLQREIADLSEQIVELESKRNDLHSALLEMG 490
Score = 50 (22.7 bits), Expect = 2.8e-09, Sum P(3) = 2.8e-09
Identities = 15/56 (26%), Positives = 31/56 (55%)
Query: 653 EAAKLQKEREEIINIVQIEKR--KRREMENHI-NLRKRKLESIEKEDDINTALAKL 705
E ++ RE + QIEKR + ++ I +L ++ +E K +D+++AL ++
Sbjct: 434 EQLNTERARENNLGGSQIEKRANESNNLQREIADLSEQIVELESKRNDLHSALLEM 489
Score = 46 (21.3 bits), Expect = 4.8e-19, Sum P(4) = 4.8e-19
Identities = 8/17 (47%), Positives = 13/17 (76%)
Query: 1 MDLPRVKRLKVSRGEDD 17
+DL VKR++ SR +D+
Sbjct: 35 VDLSNVKRIRASRNQDN 51
>FB|FBgn0015615 [details] [associations]
symbol:Cap "Chromosome-associated protein" species:7227
"Drosophila melanogaster" [GO:0008278 "cohesin complex"
evidence=ISS;NAS] [GO:0007062 "sister chromatid cohesion"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0046331 "lateral inhibition"
evidence=IMP] [GO:0007476 "imaginal disc-derived wing
morphogenesis" evidence=IMP] [GO:0001737 "establishment of imaginal
disc-derived wing hair orientation" evidence=IMP]
InterPro:IPR010935 Pfam:PF06470 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0022008 GO:GO:0046331
GO:GO:0051276 GO:GO:0001737 GO:GO:0008278 eggNOG:COG1196
SUPFAM:SSF75553 HSSP:Q9X0R4 EMBL:U30492 PIR:S70553
ProteinModelPortal:Q24098 SMR:Q24098 STRING:Q24098 PaxDb:Q24098
PRIDE:Q24098 FlyBase:FBgn0015615 InParanoid:Q24098
OrthoDB:EOG4KKWHV ArrayExpress:Q24098 Bgee:Q24098 Uniprot:Q24098
Length = 1231
Score = 166 (63.5 bits), Expect = 7.2e-19, Sum P(3) = 7.2e-19
Identities = 91/391 (23%), Positives = 178/391 (45%)
Query: 644 QTEQRLIEDEAAKLQKEREEIINI-VQIEKRKRREMENHI--NLRKRK------LESIEK 694
Q E + D+ +L +E +E +Q E RK + ++N + NL +R+ L+ I
Sbjct: 825 QREIDQLNDDIRRLNQENKEAFTQRMQFEVRKNK-LDNLLINNLFRRRDELIQALQEISV 883
Query: 695 ED---DINTALAKLVDQAADLNIQQFKYAIE-IKNLLVEIVSCKWSYAEKHMASIEFDAK 750
ED +N +LV +A+ I++ +E I+ ++E V + ++ + K
Sbjct: 884 EDRKRKLNNCKTELV--SAEKRIKKVNSDLEEIEKRVMEAVQLQKELQQELETHVR---K 938
Query: 751 IRELEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEM 810
+E E NL + K + S ++++ C + ++ ++ + P + + +
Sbjct: 939 EKEAEENLNKDSKQLEKWSTKENMLNEKIDECTEKIASLG----AVPLVDPSYTR--MSL 992
Query: 811 PTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDL-STKQEADKKELKRFLAE 869
+ELE A Q ++ + N + N+ L ++ Q E L K+E D + K +
Sbjct: 993 KNIFKELEKANQ-HLKKYNHV---NKKALDQFLSFSEQKEKLYRRKEELDIGDQKIHML- 1047
Query: 870 IDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSL---------DEHESDF---DKF 917
I +L+ + + ++ Q+ + F++ F+++ G L DE E + D F
Sbjct: 1048 IQSLEMQKVEAIQFTFRQVAQNFTKVFKKLVPMGAGFLILKTKDNEGDEMEKEVENSDAF 1107
Query: 918 -GILIKVKFRQSGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPI 976
GI I+V F + E+ + SGG++S+ + + S+Q PF + DEI+Q +D +
Sbjct: 1108 TGIGIRVSFT-GVEAEMREMNQLSGGQKSLVALALIFSIQKCDPAPFYLFDEIDQALDAM 1166
Query: 977 NERKMFQQLVRAASQPNTPQCFLLT--PKLL 1005
+ RK ++ S +T Q T P+LL
Sbjct: 1167 H-RKAVANMIHELS--DTAQFITTTFRPELL 1194
Score = 160 (61.4 bits), Expect = 7.2e-19, Sum P(3) = 7.2e-19
Identities = 81/331 (24%), Positives = 142/331 (42%)
Query: 18 YMPGNIIEIELHNFMTF-DHLICKP-GSRLNLVIGPNGSGKSSLVCAIALALGGD-TQLL 74
Y +I +I + F ++ D + +P R N+V+G NGSGKS+ AI L + T L
Sbjct: 29 YNKMHIKQIIIQGFKSYKDQTVVEPFDKRHNVVVGRNGSGKSNFFYAIQFVLSDEFTHLR 88
Query: 75 GRATSIGAYVKRGEE--SGYIKISL-RGDTK---EEHLTIMRKIDTRNKSEWFFNGKVVP 128
+ G S Y++I D + ++ +R++ K ++F N KVVP
Sbjct: 89 PEQRQSLLHEGTGARVISAYVEIIFDNSDNRVPIDKEEIFLRRVIGAKKDQYFLNKKVVP 148
Query: 129 KGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSP---VKLLEETEKA-VGDPQLPVQHC 184
+ EV+ + + +N + Q ++ + A + +KLL E V D +
Sbjct: 149 RNEVVNLLESAGFSSSNPYYIVKQGKINQMATAADSYRLKLLREVAGTRVYDERKEESLN 208
Query: 185 ALVEKSSKLKTIECTVKRNGDTLNQLKALNVE--QEKDVERVRQRAELLE---KVESMKK 239
L E SK++ I +K D L L+ E + + ++ R+ E + +++ KK
Sbjct: 209 LLRETDSKVEKISEYLKTIEDRLQTLEEEKEELKEYQKWDKTRRTLEYIRYETELKDTKK 268
Query: 240 KLPWLKYDMKKA---EYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCK 296
L L+ K + + I N L E K ++ K+E+++L
Sbjct: 269 ALDELQLQRKSSSDKKKIYNIEIQKAQEKIKDVQKN-LKEAKKKVQSTKEERSVL---MT 324
Query: 297 KLSSLINENSKRRMDFLEKVDQGVQVQGKYK 327
+ L+ E +K +D L VD +VQG K
Sbjct: 325 EQQQLLREKTK--LD-LTIVDLNDEVQGDNK 352
Score = 95 (38.5 bits), Expect = 1.7e-11, Sum P(3) = 1.7e-11
Identities = 53/241 (21%), Positives = 109/241 (45%)
Query: 644 QTEQRLIEDEAAKLQKE----REEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDIN 699
+T+Q +D K+Q E +EE++ I Q K R + K LES+
Sbjct: 753 ETKQGKSKDVFEKVQGEIRLMKEELVRIEQYRAPKERSLAQC----KASLESMTSTKSSL 808
Query: 700 TALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEF--- 756
A K + + L+ Q + EI L +I E ++F+ + +L+
Sbjct: 809 EAELKQ-ELMSTLSSQDQR---EIDQLNDDIRRLNQENKEAFTQRMQFEVRKNKLDNLLI 864
Query: 757 -NL-KQHEKL--ALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPT 812
NL ++ ++L ALQ + ED K+++ +C+ L A+++ + + E+EK +E
Sbjct: 865 NNLFRRRDELIQALQ-EISVEDRKRKLNNCKTELVSAEKRIKKVNSDLEEIEKRVMEAVQ 923
Query: 813 TIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDA 872
+EL+ ++ ++ + +N+ ++ +Q+E STK+ +++ +I +
Sbjct: 924 LQKELQQELETHVRKEKEA---EENLNKD----SKQLEKWSTKENMLNEKIDECTEKIAS 976
Query: 873 L 873
L
Sbjct: 977 L 977
Score = 70 (29.7 bits), Expect = 5.6e-09, Sum P(3) = 5.6e-09
Identities = 48/268 (17%), Positives = 124/268 (46%)
Query: 656 KLQKEREEIIN-IVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAADLNI 714
++QK+R E + I + EK K ++ N + + + SI E + K Q ++
Sbjct: 709 EMQKKRTEYTSQIAEFEK-KLSKLRNELKSTENNINSIVSE--MQKTETK---QGKSKDV 762
Query: 715 QQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIREL---EFNLKQHEKLALQASLH 771
+ K EI+ + E+V + A K + + A + + + +L+ K L ++L
Sbjct: 763 FE-KVQGEIRLMKEELVRIEQYRAPKERSLAQCKASLESMTSTKSSLEAELKQELMSTLS 821
Query: 772 YEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSI 831
+D ++E++ + ++ + AF T ++ E + +L+ + +N+ +
Sbjct: 822 SQD-QREIDQLNDDIRRLNQENKE-AF-TQRMQFEVRK-----NKLDNLLINNLFRRRDE 873
Query: 832 FFLNQNILQEY--EHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLVAQIN 889
LQE E R+R++ + T+ + +K +K+ ++++ ++++ + ++ L ++
Sbjct: 874 LI---QALQEISVEDRKRKLNNCKTELVSAEKRIKKVNSDLEEIEKRVMEAVQ-LQKELQ 929
Query: 890 ETFSRNFQEMAVAGEVSLDEHESDFDKF 917
+ + ++ A E +L++ +K+
Sbjct: 930 QELETHVRKEKEAEE-NLNKDSKQLEKW 956
Score = 62 (26.9 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 36/180 (20%), Positives = 76/180 (42%)
Query: 643 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKE-DDINTA 701
+ TEQ+ + E KL ++ + VQ + + + + + K + EKE DD+
Sbjct: 322 LMTEQQQLLREKTKLDLTIVDLNDEVQGDNKSKERADQELKNLKVTIAEREKELDDVKPK 381
Query: 702 LAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKI-RELEFNLKQ 760
+ + D + + +++K + + K + + + D I EL+ KQ
Sbjct: 382 YEAMKRKEEDCSRE-----LQLKEQKRKELYAKQGRGSQFSSREDRDKWITNELKSISKQ 436
Query: 761 -HEKLALQASLHYEDCKKEV---EHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEE 816
+K+A A L ED KK+ + + + + + E + E K++ E+ T ++
Sbjct: 437 TRDKIAHHAKL-VEDLKKDATSEKDLGQKIEEHSSELEQLRLQIDEHNKKYYELKKTKDQ 495
Score = 58 (25.5 bits), Expect = 1.7e-08, Sum P(3) = 1.7e-08
Identities = 27/115 (23%), Positives = 46/115 (40%)
Query: 186 LVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLE-KVESMKKKLPWL 244
+V+ + +++ + +R L LK E+EK+++ V+ + E ++ K E ++L L
Sbjct: 340 IVDLNDEVQGDNKSKERADQELKNLKVTIAEREKELDDVKPKYEAMKRKEEDCSRELQ-L 398
Query: 245 KYDMKKAEYIXXXXXXXXXXXXXXXX--XNTLHEFSKPIEGKKQEKAILDGDCKK 297
K +K Y N L SK K A L D KK
Sbjct: 399 KEQKRKELYAKQGRGSQFSSREDRDKWITNELKSISKQTRDKIAHHAKLVEDLKK 453
Score = 57 (25.1 bits), Expect = 6.2e-09, Sum P(4) = 6.2e-09
Identities = 24/100 (24%), Positives = 52/100 (52%)
Query: 161 LSPVKLLEETEKAVGDPQLPVQHCALVEKSSKL-KT--IECTVKRNGDTLNQLKAL---- 213
+S +K E+ +KA+ C +E++++L K+ ++C V +GD ++ +L
Sbjct: 642 ISKLKYDEQHDKALRYIFGKTLICRNLERATELAKSTGLDC-VTLDGDQVSSKGSLTGGY 700
Query: 214 -NVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAE 252
N + + +E ++R E ++ +KKL L+ ++K E
Sbjct: 701 FNTSRSR-LEMQKKRTEYTSQIAEFEKKLSKLRNELKSTE 739
Score = 51 (23.0 bits), Expect = 8.5e-08, Sum P(3) = 8.5e-08
Identities = 26/120 (21%), Positives = 48/120 (40%)
Query: 201 KRNGDTLNQLKALNVEQEKDVERVR-QRAELLEKVESMKKKLPWLKYDMK--KAEYIXXX 257
K+ D L QL+ + +K + + Q+A+ EK++ ++K L K ++ K E
Sbjct: 267 KKALDEL-QLQRKSSSDKKKIYNIEIQKAQ--EKIKDVQKNLKEAKKKVQSTKEERSVLM 323
Query: 258 XXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENSKRRMDFLEKVD 317
T+ + + ++G + K D + K L I E K D K +
Sbjct: 324 TEQQQLLREKTKLDLTIVDLNDEVQGDNKSKERADQELKNLKVTIAEREKELDDVKPKYE 383
Score = 50 (22.7 bits), Expect = 5.6e-07, Sum P(3) = 5.6e-07
Identities = 32/192 (16%), Positives = 78/192 (40%)
Query: 681 HINLRKRKLESIEKEDDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEK 740
+ N + +LE +K + + +A+ + + L + I +++ E+ + +
Sbjct: 700 YFNTSRSRLEMQKKRTEYTSQIAEFEKKLSKLRNELKSTENNINSIVSEMQKTETKQGKS 759
Query: 741 HMASIEFDAKIRELEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLS--DAKRQAESIAF 798
+ +IR ++ L + E+ CK +E S +A+ + E ++
Sbjct: 760 KDVFEKVQGEIRLMKEELVRIEQYRAPKERSLAQCKASLESMTSTKSSLEAELKQELMST 819
Query: 799 ITPELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHR---QRQIEDLSTK 855
++ + ++E ++ I L ++ +Q F + +N L +R+ E +
Sbjct: 820 LSSQDQREIDQLNDDIRRLNQENKEAFTQRMQ-FEVRKNKLDNLLINNLFRRRDELIQAL 878
Query: 856 QEADKKELKRFL 867
QE ++ KR L
Sbjct: 879 QEISVEDRKRKL 890
Score = 49 (22.3 bits), Expect = 6.2e-09, Sum P(4) = 6.2e-09
Identities = 9/29 (31%), Positives = 20/29 (68%)
Query: 3 LPRVKRLKVSRGEDDYMPGNIIEIELHNF 31
L + +LK+ GE +MP N +++++H++
Sbjct: 605 LKEMNKLKLP-GEVTFMPLNRLQVKIHDY 632
Score = 46 (21.3 bits), Expect = 7.2e-19, Sum P(3) = 7.2e-19
Identities = 19/87 (21%), Positives = 39/87 (44%)
Query: 368 DKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDME-DKNNKLLHAL 426
D EK+ +I + + + ++ KE+ L Q K +L + +E + +L+ L
Sbjct: 761 DVFEKVQGEIRLMKEELVRIEQYRAPKERSLAQCKASLESMTSTKSSLEAELKQELMSTL 820
Query: 427 RNSGAENIFEAYCWLQQHRHELNKEAY 453
+ I + +++ E NKEA+
Sbjct: 821 SSQDQREIDQLNDDIRRLNQE-NKEAF 846
Score = 45 (20.9 bits), Expect = 9.1e-19, Sum P(3) = 9.1e-19
Identities = 14/49 (28%), Positives = 27/49 (55%)
Query: 372 KLGSQILELG--VQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDK 418
KL I++L VQ + K +++++E L K+T+ + L D++ K
Sbjct: 335 KLDLTIVDLNDEVQGDNKSKERADQE--LKNLKVTIAEREKELDDVKPK 381
Score = 45 (20.9 bits), Expect = 1.8e-06, Sum P(3) = 1.8e-06
Identities = 30/152 (19%), Positives = 63/152 (41%)
Query: 657 LQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDD-INTALAKLVDQAADLNIQ 715
++++ E+ +Q++++KR+E+ R + S E D I L + Q D
Sbjct: 385 MKRKEEDCSRELQLKEQKRKELYAKQG-RGSQFSSREDRDKWITNELKSISKQTRDKIAH 443
Query: 716 QFKYAIEIKNLLVEIVSCK--WSYAEKHMASIE--------FDAKIRELEFNLKQHEKLA 765
K ++K + S K E+H + +E + K EL+ QH+ +
Sbjct: 444 HAKLVEDLKK---DATSEKDLGQKIEEHSSELEQLRLQIDEHNKKYYELKKTKDQHQSMR 500
Query: 766 LQASLHYEDCKKEVEHCRKHLSDAKRQAESIA 797
+ ++++ ++ LS A + S+A
Sbjct: 501 NELWRKETQMTQQLQTHKEELSRADQALRSMA 532
Score = 44 (20.5 bits), Expect = 1.2e-18, Sum P(3) = 1.2e-18
Identities = 18/63 (28%), Positives = 26/63 (41%)
Query: 371 EK-LGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNS 429
EK LG +I E + Q RLQ E K + K T Q ++ K ++ L+
Sbjct: 458 EKDLGQKIEEHSSELEQLRLQIDEHNKKYYELKKTKDQHQSMRNELWRKETQMTQQLQTH 517
Query: 430 GAE 432
E
Sbjct: 518 KEE 520
Score = 41 (19.5 bits), Expect = 2.4e-18, Sum P(3) = 2.4e-18
Identities = 18/73 (24%), Positives = 41/73 (56%)
Query: 369 KIEKLGSQILELGVQANQ--KRLQKSEKEKILNQ---NKLTLR--QCSDRLKDMEDKNNK 421
KIE+ S++ +L +Q ++ K+ + +K K +Q N+L + Q + +L+ +++ ++
Sbjct: 464 KIEEHSSELEQLRLQIDEHNKKYYELKKTKDQHQSMRNELWRKETQMTQQLQTHKEELSR 523
Query: 422 LLHALRNSGAENI 434
ALR+ + I
Sbjct: 524 ADQALRSMAGKPI 536
Score = 40 (19.1 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 15/68 (22%), Positives = 35/68 (51%)
Query: 368 DKIEKLGSQILELGVQANQK---RLQKS-EKEKILNQNKLTLRQCSDRLKDMEDKNNKLL 423
++IEK + ++L + Q+ ++K E E+ LN++ L + S + + +K ++
Sbjct: 912 EEIEKRVMEAVQLQKELQQELETHVRKEKEAEENLNKDSKQLEKWSTKENMLNEKIDECT 971
Query: 424 HALRNSGA 431
+ + GA
Sbjct: 972 EKIASLGA 979
Score = 39 (18.8 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 8/29 (27%), Positives = 16/29 (55%)
Query: 390 QKSEKEKILNQNKLTLRQCSDRLKDMEDK 418
+K E +L + + + S+ LK +ED+
Sbjct: 202 RKEESLNLLRETDSKVEKISEYLKTIEDR 230
>GENEDB_PFALCIPARUM|MAL13P1.96 [details] [associations]
symbol:MAL13P1.96 "chromosome segregation
protein, putative" species:5833 "Plasmodium falciparum" [GO:0000070
"mitotic sister chromatid segregation" evidence=ISS]
InterPro:IPR010935 InterPro:IPR027120 Pfam:PF06470 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0005634
GO:GO:0051301 GO:GO:0046982 GO:GO:0007076 EMBL:AL844509
GO:GO:0000796 eggNOG:COG1196 SUPFAM:SSF75553 KO:K06674
PANTHER:PTHR18937:SF9 HSSP:P32908 HOGENOM:HOG000163792 OMA:CQNGKIP
RefSeq:XP_001349920.1 ProteinModelPortal:Q8IED2 IntAct:Q8IED2
MINT:MINT-1645015 PRIDE:Q8IED2 EnsemblProtists:MAL13P1.96:mRNA
GeneID:813987 KEGG:pfa:MAL13P1.96 EuPathDB:PlasmoDB:PF3D7_1318400
ProtClustDB:CLSZ2432256 Uniprot:Q8IED2
Length = 1218
Score = 191 (72.3 bits), Expect = 2.9e-18, Sum P(3) = 2.9e-18
Identities = 85/353 (24%), Positives = 162/353 (45%)
Query: 651 EDEAAKLQKEREEIINIVQIEKRKRREM-------ENHINLRKRKLESIEKEDDI-NTAL 702
ED ++K + +I + E +K+ E+ EN+ ++++ + D+I N
Sbjct: 809 EDLKETIKKLKNKIKQLETEEHKKKEEIDDVLLQIENYKKQKEKETNDLSSTDEIINEIE 868
Query: 703 AKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAE--KHMAS-IE-FDAKIRELEFNL 758
K+ D ++NI + E++N + E+ S SY KH+ IE + K E +L
Sbjct: 869 KKIEDIEKNINITKENLK-ELENKITELQSSFSSYENEMKHVVKKIEDLEKKKSENILDL 927
Query: 759 KQHEKLALQASLHYEDCKKEVEHCRK-HLSDAKRQAESIAFITPELEKEFLEMPTTIEEL 817
K+ E L + V++ K H+ + TP + F I++
Sbjct: 928 KKLENTLLDLQKDLKTSSDTVKYLYKTHVWIESYEPLFNKKYTPYDFENFRH--DVIQKK 985
Query: 818 EAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQ---EADKKELKRFLAEIDALK 874
A+Q+ ++ + +N+ +Q YE Q +DL TK+ E DKK+++ +A++D K
Sbjct: 986 IQALQNEQNKLS--ININRKAVQMYEQVQVDYKDLVTKKSQVEEDKKKIQEVIADLDVKK 1043
Query: 875 EKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVL 934
+ +L + QINE F F + + L + D GI +K+ F + + E L
Sbjct: 1044 SE---SLLAMYQQINEYFQAIFSTLLNNAQAKLSIVDGDLAN-GIEMKIAFNNNWK-ESL 1098
Query: 935 SAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVR 987
+ SGG+RS+ + +++L + P ++DEI+ +D +N + ++R
Sbjct: 1099 T--ELSGGQRSLLALSLILALLKVRTVPMYILDEIDAALD-LNHTQNIGDMIR 1148
Score = 111 (44.1 bits), Expect = 2.9e-18, Sum P(3) = 2.9e-18
Identities = 56/282 (19%), Positives = 112/282 (39%)
Query: 23 IIEIELHNFMTFD-HLICKP-GSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI 80
I EI L F ++ + P + N + G NGSGKS+++ AI +G + L R +
Sbjct: 3 IEEIILDGFKSYPTKTVIGPFHPQFNAITGLNGSGKSNVLDAICFVMGINNLNLIRVNRL 62
Query: 81 GAYV-KRGEES---GYIKISLRGDTKE----------EHLTIMRKIDTRNKSEWFFNGKV 126
+ K+G+ G + I + K +++TI R+I ++ + N
Sbjct: 63 DELIYKQGQAGITKGSVTIKFNNEEKPSPLQEPYRDMKNITITRQIVLGGRNRYLLNSHN 122
Query: 127 VPKGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCAL 186
++ + + + +NN + Q ++ + + P++LL E++ G V+
Sbjct: 123 AKPKDISDFFQSLKLNINNPHFLIMQGKITKVINMKPIELLGLIEESSGTKLYEVKRTNA 182
Query: 187 VEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKY 246
++ +K + + N +++ V+ +K+ E + E++E +K KY
Sbjct: 183 IKLM--VKKDQKLGEINKVLFEEIEPTLVKLKKEKEEYNKFVSNNEEIEKYEKVEIAYKY 240
Query: 247 DMKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEK 288
+ K + E K IE K EK
Sbjct: 241 YVAKKMMTKCEEKIEDAKSEEKILEKGIKEIDKDIEKYKIEK 282
Score = 108 (43.1 bits), Expect = 1.6e-09, Sum P(3) = 1.6e-09
Identities = 56/255 (21%), Positives = 120/255 (47%)
Query: 652 DEAAKLQKEREEIINIVQIEKRKR---REM---ENHINLRKRKLE-----SIEKE-DDIN 699
D KL++ E++ ++ + E++K+ +E+ EN++N + ++E S+ K+ ++
Sbjct: 707 DNENKLKEVSEKLKSLEKAEEKKKIISKELQIYENNLNNIENRMETSKYGSVNKKIEEHK 766
Query: 700 TALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLK 759
+ K ++ ++L +Q K I+ L +I + A K + I++L+ +K
Sbjct: 767 NEIDKGRNELSELYKEQKKLTEVIRKLEKDISEYE---ANKDKKEEDLKETIKKLKNKIK 823
Query: 760 QHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTI---EE 816
Q E + +D ++E+ +K S I E+EK+ ++ I +E
Sbjct: 824 QLETEEHKKKEEIDDVLLQIENYKKQKEKETNDLSSTDEIINEIEKKIEDIEKNINITKE 883
Query: 817 LEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEK 876
+++ I++ S F +N E +H ++IEDL K+ + +LK+ + L +K
Sbjct: 884 NLKELENKITELQSSFSSYEN---EMKHVVKKIEDLEKKKSENILDLKKLENTLLDL-QK 939
Query: 877 WLPTLRNLVAQINET 891
L T + V + +T
Sbjct: 940 DLKTSSDTVKYLYKT 954
Score = 104 (41.7 bits), Expect = 4.1e-09, Sum P(3) = 4.1e-09
Identities = 37/178 (20%), Positives = 84/178 (47%)
Query: 650 IEDEAAKLQKEREEIINIVQIEKRKR---REMENHINLRKRKLESIEKEDDINTALAKLV 706
IE+ ++ K R E+ + + +K+ R++E I+ + + +KE+D+ + KL
Sbjct: 762 IEEHKNEIDKGRNELSELYKEQKKLTEVIRKLEKDIS--EYEANKDKKEEDLKETIKKLK 819
Query: 707 DQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEF-DAKIRELEFNLKQHEKLA 765
++ L ++ K EI ++L++I + K EK + D I E+E ++ EK
Sbjct: 820 NKIKQLETEEHKKKEEIDDVLLQIENYK-KQKEKETNDLSSTDEIINEIEKKIEDIEKNI 878
Query: 766 LQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQD 823
+ ++ + ++ + S + + + + +LEK+ E +++LE + D
Sbjct: 879 NITKENLKELENKITELQSSFSSYENEMKHVVKKIEDLEKKKSENILDLKKLENTLLD 936
Score = 77 (32.2 bits), Expect = 2.1e-06, Sum P(3) = 2.1e-06
Identities = 49/232 (21%), Positives = 95/232 (40%)
Query: 667 IVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAADLNIQQFKYAIEIKNL 726
++ EK K ++ + H N K K E EK + A K + +L I Y + N+
Sbjct: 692 LLNYEKYKHKKEQYHDNENKLK-EVSEKLKSLEKAEEKKKIISKELQI----YENNLNNI 746
Query: 727 LVEIVSCKWSYAEKHMASI--EFDAKIRELEFNLKQHEKLA-----LQASL-HYEDCKKE 778
+ + K+ K + E D EL K+ +KL L+ + YE K +
Sbjct: 747 ENRMETSKYGSVNKKIEEHKNEIDKGRNELSELYKEQKKLTEVIRKLEKDISEYEANKDK 806
Query: 779 VEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNI 838
E K K+ I + E K+ E+ + ++E + + N + ++ I
Sbjct: 807 KEEDLKET--IKKLKNKIKQLETEEHKKKEEIDDVLLQIENYKKQKEKETNDLSSTDE-I 863
Query: 839 LQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLVAQINE 890
+ E E + IE + + KEL+ + E+ + + ++++V +I +
Sbjct: 864 INEIEKKIEDIEKNINITKENLKELENKITELQSSFSSYENEMKHVVKKIED 915
Score = 73 (30.8 bits), Expect = 1.0e-05, Sum P(3) = 1.0e-05
Identities = 38/201 (18%), Positives = 93/201 (46%)
Query: 643 MQTEQRLIEDEAAKLQKEREEI---INIVQ--IEKRKRREMENHINLR-----KRKLESI 692
+++E ++ E AK ++ RE+I IN +Q ++ ++ +N+ NL+ K+K+E +
Sbjct: 313 LKSEAKMENKEKAKEKRRREDIKKEINNLQNKLDDYQKNNEKNNKNLKSYEDLKKKIEIL 372
Query: 693 EKE-DDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKI 751
++E ++ + L+ + N + ++KN + + + + +I
Sbjct: 373 KEELNEKQLTMNCLLSAGTNNNEYTGSFREQLKNYKTNLSKAETQINNFLQNNKHLEKEI 432
Query: 752 RELEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFI-TPELEKEFLEM 810
L+ K++EK + S + +K+ + C + L ++ + + T + +K L
Sbjct: 433 MTLKEQRKKYEKEYNEISKEKDIEEKKKKLCEQELDKLNKEYNNFMELDTLKTDKNILY- 491
Query: 811 PTTIEELEAAIQDNISQANSI 831
+E+L+ +Q + NS+
Sbjct: 492 -NDMEKLQQELQVLKNIINSV 511
Score = 71 (30.1 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 33/162 (20%), Positives = 67/162 (41%)
Query: 645 TEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAK 704
+++ +E + ++L+ E + EKR+R +++ IN + KL+ +K ++ N K
Sbjct: 301 SQKEELEKKISQLKSEAKMENKEKAKEKRRREDIKKEINNLQNKLDDYQKNNEKNNKNLK 360
Query: 705 LVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKL 764
+ I+ K + K L + +C S + E+ RE LK ++
Sbjct: 361 SYEDLKK-KIEILKEELNEKQLTM---NCLLSAGTNNN---EYTGSFRE---QLKNYKTN 410
Query: 765 ALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKE 806
+A + + +H K + K Q + E+ KE
Sbjct: 411 LSKAETQINNFLQNNKHLEKEIMTLKEQRKKYEKEYNEISKE 452
Score = 63 (27.2 bits), Expect = 2.9e-18, Sum P(3) = 2.9e-18
Identities = 43/161 (26%), Positives = 76/161 (47%)
Query: 369 KIEKLGSQI-LELGVQANQKRLQKSEKEKILN-QNKLTLRQCSDRLKDMEDKNNKLLHAL 426
KI +L S+ +E +A +KR ++ K++I N QNKL D K+ E KNNK L +
Sbjct: 309 KISQLKSEAKMENKEKAKEKRRREDIKKEINNLQNKL-----DDYQKNNE-KNNKNLKSY 362
Query: 427 RNSGAENIFEAYCWLQQHRHELN-KEAYGPVLLEVNVSNRAHANYLEDHVGHYIWKSFIT 485
E++ + ++ + ELN K+ LL +N + + + +Y K+ ++
Sbjct: 363 -----EDLKKK---IEILKEELNEKQLTMNCLLSAGTNNNEYTGSFREQLKNY--KTNLS 412
Query: 486 Q-DAGDRDFLAKNLKPFDVPILNYVSNESS-RKEPFQISEE 524
+ + +FL N K + I+ KE +IS+E
Sbjct: 413 KAETQINNFLQNN-KHLEKEIMTLKEQRKKYEKEYNEISKE 452
Score = 60 (26.2 bits), Expect = 5.9e-18, Sum P(3) = 5.9e-18
Identities = 23/88 (26%), Positives = 40/88 (45%)
Query: 368 DKIEKLGSQ--ILELGVQANQKRLQKS--EKEKILNQNKLTLRQCSDRLKDMEDKNNKLL 423
+KIE S+ ILE G++ K ++K EKEKI+ + + E+ K+
Sbjct: 252 EKIEDAKSEEKILEKGIKEIDKDIEKYKIEKEKIVKETNTASEPMKILISQKEELEKKIS 311
Query: 424 HALRNSGAENIFEAYCWLQQHRHELNKE 451
+ EN +A ++ R ++ KE
Sbjct: 312 QLKSEAKMENKEKAK--EKRRREDIKKE 337
Score = 60 (26.2 bits), Expect = 9.9e-05, Sum P(3) = 9.9e-05
Identities = 35/183 (19%), Positives = 80/183 (43%)
Query: 644 QTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTA-- 701
+ E ++ E +++ E E + +IE ++++ EN ++L+K + ++ + D+ T+
Sbjct: 887 ELENKITELQSSFSSYENEMKHVVKKIEDLEKKKSENILDLKKLENTLLDLQKDLKTSSD 946
Query: 702 LAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQH 761
K + + + I+ ++ K + + + +K + +++ + + N K
Sbjct: 947 TVKYLYKT-HVWIESYEPLFNKKYTPYDFENFRHDVIQKKIQALQNEQNKLSININRKAV 1005
Query: 762 EKLALQASLHYEDC---KKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELE 818
+ Q + Y+D K +VE D K+ E IA + + + L M I E
Sbjct: 1006 QMYE-QVQVDYKDLVTKKSQVEE------DKKKIQEVIADLDVKKSESLLAMYQQINEYF 1058
Query: 819 AAI 821
AI
Sbjct: 1059 QAI 1061
Score = 60 (26.2 bits), Expect = 9.9e-05, Sum P(3) = 9.9e-05
Identities = 48/220 (21%), Positives = 92/220 (41%)
Query: 643 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTAL 702
++ E ++++ K +KE EI IE++K++ E ++ ++ + + D + T
Sbjct: 428 LEKEIMTLKEQRKKYEKEYNEISKEKDIEEKKKKLCEQELDKLNKEYNNFMELDTLKTDK 487
Query: 703 AKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYA-EKHMASIEFDAKIREL-----EF 756
L + L Q+ + +KN+ I S K Y +M S + +I +L E+
Sbjct: 488 NILYNDMEKLQ-QELQV---LKNI---INSVKIDYKIPSNMKSTDVLGQIYKLIKIKKEY 540
Query: 757 -NLKQHEKLALQASLHYEDCKKEVEHCRK-----HLSDAKRQAESIAFITPELEKEFLEM 810
N L L L Y + + EH ++ + S ++ + + +E E
Sbjct: 541 INTALAVHLILGGKLTYLLVQNK-EHSKRLFEYNNFSSGSKRVTLLPLEDCVISREVHEK 599
Query: 811 PTTIEELEAAIQDNISQANS-IFFLNQNILQEYEHRQRQI 849
IEE + NI N I+FL+ + EY+ +I
Sbjct: 600 H--IEECRRNVGLNIKDKNDVIYFLD---IMEYDKNLERI 634
Score = 56 (24.8 bits), Expect = 5.0e-11, Sum P(3) = 5.0e-11
Identities = 22/84 (26%), Positives = 43/84 (51%)
Query: 163 PVKLL----EETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTL-NQLKALNVEQ 217
P+K+L EE EK + QL + ++ +K K +K+ + L N+L
Sbjct: 295 PMKILISQKEELEKKIS--QLKSEAKMENKEKAKEKRRREDIKKEINNLQNKLDDYQKNN 352
Query: 218 EKDVERVRQRAELLEKVESMKKKL 241
EK+ + ++ +L +K+E +K++L
Sbjct: 353 EKNNKNLKSYEDLKKKIEILKEEL 376
Score = 56 (24.8 bits), Expect = 0.00025, Sum P(3) = 0.00025
Identities = 26/143 (18%), Positives = 59/143 (41%)
Query: 752 RELEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPEL---EKEFL 808
+ + L +EK + Y D + +++ + L ++ E I+ EL E
Sbjct: 686 KNINLFLLNYEKYKHKKE-QYHDNENKLKEVSEKLKSLEKAEEKKKIISKELQIYENNLN 744
Query: 809 EMPTTIEELE-AAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFL 867
+ +E + ++ I + + +N L E Q+++ ++ K E K++ +
Sbjct: 745 NIENRMETSKYGSVNKKIEEHKNEIDKGRNELSELYKEQKKLTEVIRKLE---KDISEYE 801
Query: 868 AEIDALKEKWLPTLRNLVAQINE 890
A D +E T++ L +I +
Sbjct: 802 ANKDKKEEDLKETIKKLKNKIKQ 824
Score = 51 (23.0 bits), Expect = 1.6e-10, Sum P(3) = 1.6e-10
Identities = 29/130 (22%), Positives = 53/130 (40%)
Query: 188 EKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAE----LLEKVESMKKKLPW 243
+ S+ K +E +K + + K +E+EK V+ +E L+ + E ++KK+
Sbjct: 256 DAKSEEKILEKGIKEIDKDIEKYK---IEKEKIVKETNTASEPMKILISQKEELEKKISQ 312
Query: 244 LKYD--MKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILD-GDCKKLSS 300
LK + M+ E N L ++ K +K K + D KK
Sbjct: 313 LKSEAKMENKEKAKEKRRREDIKKEINNLQNKLDDYQK--NNEKNNKNLKSYEDLKKKIE 370
Query: 301 LINE--NSKR 308
++ E N K+
Sbjct: 371 ILKEELNEKQ 380
Score = 47 (21.6 bits), Expect = 1.3e-16, Sum P(3) = 1.3e-16
Identities = 12/51 (23%), Positives = 28/51 (54%)
Query: 371 EKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNK 421
+KL I +L ++ K +KE+ L + T+++ +++K +E + +K
Sbjct: 784 KKLTEVIRKLEKDISEYEANKDKKEEDLKE---TIKKLKNKIKQLETEEHK 831
Score = 45 (20.9 bits), Expect = 2.0e-16, Sum P(3) = 2.0e-16
Identities = 12/32 (37%), Positives = 20/32 (62%)
Query: 391 KSEKEKIL-NQNKLTLRQCSDRLKDMEDKNNK 421
K +KE+ N+NKL ++ S++LK +E K
Sbjct: 699 KHKKEQYHDNENKL--KEVSEKLKSLEKAEEK 728
Score = 45 (20.9 bits), Expect = 6.0e-10, Sum P(2) = 6.0e-10
Identities = 19/92 (20%), Positives = 38/92 (41%)
Query: 216 EQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAEYIXXXXXXXXXXXXXXXXXNTLH 275
+ E ++ V ++ + LEK E KKK+ + +++ E +
Sbjct: 707 DNENKLKEVSEKLKSLEKAEE-KKKI--ISKELQIYENNLNNIENRMETSKYGSVNKKIE 763
Query: 276 EFSKPIEGKKQEKAILDGDCKKLSSLINENSK 307
E I+ + E + L + KKL+ +I + K
Sbjct: 764 EHKNEIDKGRNELSELYKEQKKLTEVIRKLEK 795
Score = 45 (20.9 bits), Expect = 6.4e-10, Sum P(3) = 6.4e-10
Identities = 18/64 (28%), Positives = 27/64 (42%)
Query: 191 SKLKT-IECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMK 249
SK +T I ++ N ++ L EQ K E+ + +E KKKL + D
Sbjct: 412 SKAETQINNFLQNNKHLEKEIMTLK-EQRKKYEKEYNEISKEKDIEEKKKKLCEQELDKL 470
Query: 250 KAEY 253
EY
Sbjct: 471 NKEY 474
Score = 40 (19.1 bits), Expect = 6.5e-16, Sum P(3) = 6.5e-16
Identities = 12/46 (26%), Positives = 21/46 (45%)
Query: 368 DKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLK 413
DK+ K + +EL K + ++ EK L Q L+ + +K
Sbjct: 468 DKLNKEYNNFMELDTLKTDKNILYNDMEK-LQQELQVLKNIINSVK 512
Score = 38 (18.4 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 6/16 (37%), Positives = 10/16 (62%)
Query: 426 LRNSGAENIFEAYCWL 441
L SG N+ +A C++
Sbjct: 33 LNGSGKSNVLDAICFV 48
>UNIPROTKB|Q8IED2 [details] [associations]
symbol:MAL13P1.96 "Structural maintenance of chromosomes
protein 2" species:36329 "Plasmodium falciparum 3D7" [GO:0000070
"mitotic sister chromatid segregation" evidence=ISS] [GO:0000796
"condensin complex" evidence=ISS] [GO:0007076 "mitotic chromosome
condensation" evidence=ISS] [GO:0046982 "protein heterodimerization
activity" evidence=ISS] InterPro:IPR010935 InterPro:IPR027120
Pfam:PF06470 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0005634 GO:GO:0051301 GO:GO:0046982
GO:GO:0007076 EMBL:AL844509 GO:GO:0000796 eggNOG:COG1196
SUPFAM:SSF75553 KO:K06674 PANTHER:PTHR18937:SF9 HSSP:P32908
HOGENOM:HOG000163792 OMA:CQNGKIP RefSeq:XP_001349920.1
ProteinModelPortal:Q8IED2 IntAct:Q8IED2 MINT:MINT-1645015
PRIDE:Q8IED2 EnsemblProtists:MAL13P1.96:mRNA GeneID:813987
KEGG:pfa:MAL13P1.96 EuPathDB:PlasmoDB:PF3D7_1318400
ProtClustDB:CLSZ2432256 Uniprot:Q8IED2
Length = 1218
Score = 191 (72.3 bits), Expect = 2.9e-18, Sum P(3) = 2.9e-18
Identities = 85/353 (24%), Positives = 162/353 (45%)
Query: 651 EDEAAKLQKEREEIINIVQIEKRKRREM-------ENHINLRKRKLESIEKEDDI-NTAL 702
ED ++K + +I + E +K+ E+ EN+ ++++ + D+I N
Sbjct: 809 EDLKETIKKLKNKIKQLETEEHKKKEEIDDVLLQIENYKKQKEKETNDLSSTDEIINEIE 868
Query: 703 AKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAE--KHMAS-IE-FDAKIRELEFNL 758
K+ D ++NI + E++N + E+ S SY KH+ IE + K E +L
Sbjct: 869 KKIEDIEKNINITKENLK-ELENKITELQSSFSSYENEMKHVVKKIEDLEKKKSENILDL 927
Query: 759 KQHEKLALQASLHYEDCKKEVEHCRK-HLSDAKRQAESIAFITPELEKEFLEMPTTIEEL 817
K+ E L + V++ K H+ + TP + F I++
Sbjct: 928 KKLENTLLDLQKDLKTSSDTVKYLYKTHVWIESYEPLFNKKYTPYDFENFRH--DVIQKK 985
Query: 818 EAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQ---EADKKELKRFLAEIDALK 874
A+Q+ ++ + +N+ +Q YE Q +DL TK+ E DKK+++ +A++D K
Sbjct: 986 IQALQNEQNKLS--ININRKAVQMYEQVQVDYKDLVTKKSQVEEDKKKIQEVIADLDVKK 1043
Query: 875 EKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVL 934
+ +L + QINE F F + + L + D GI +K+ F + + E L
Sbjct: 1044 SE---SLLAMYQQINEYFQAIFSTLLNNAQAKLSIVDGDLAN-GIEMKIAFNNNWK-ESL 1098
Query: 935 SAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVR 987
+ SGG+RS+ + +++L + P ++DEI+ +D +N + ++R
Sbjct: 1099 T--ELSGGQRSLLALSLILALLKVRTVPMYILDEIDAALD-LNHTQNIGDMIR 1148
Score = 111 (44.1 bits), Expect = 2.9e-18, Sum P(3) = 2.9e-18
Identities = 56/282 (19%), Positives = 112/282 (39%)
Query: 23 IIEIELHNFMTFD-HLICKP-GSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI 80
I EI L F ++ + P + N + G NGSGKS+++ AI +G + L R +
Sbjct: 3 IEEIILDGFKSYPTKTVIGPFHPQFNAITGLNGSGKSNVLDAICFVMGINNLNLIRVNRL 62
Query: 81 GAYV-KRGEES---GYIKISLRGDTKE----------EHLTIMRKIDTRNKSEWFFNGKV 126
+ K+G+ G + I + K +++TI R+I ++ + N
Sbjct: 63 DELIYKQGQAGITKGSVTIKFNNEEKPSPLQEPYRDMKNITITRQIVLGGRNRYLLNSHN 122
Query: 127 VPKGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCAL 186
++ + + + +NN + Q ++ + + P++LL E++ G V+
Sbjct: 123 AKPKDISDFFQSLKLNINNPHFLIMQGKITKVINMKPIELLGLIEESSGTKLYEVKRTNA 182
Query: 187 VEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKY 246
++ +K + + N +++ V+ +K+ E + E++E +K KY
Sbjct: 183 IKLM--VKKDQKLGEINKVLFEEIEPTLVKLKKEKEEYNKFVSNNEEIEKYEKVEIAYKY 240
Query: 247 DMKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEK 288
+ K + E K IE K EK
Sbjct: 241 YVAKKMMTKCEEKIEDAKSEEKILEKGIKEIDKDIEKYKIEK 282
Score = 108 (43.1 bits), Expect = 1.6e-09, Sum P(3) = 1.6e-09
Identities = 56/255 (21%), Positives = 120/255 (47%)
Query: 652 DEAAKLQKEREEIINIVQIEKRKR---REM---ENHINLRKRKLE-----SIEKE-DDIN 699
D KL++ E++ ++ + E++K+ +E+ EN++N + ++E S+ K+ ++
Sbjct: 707 DNENKLKEVSEKLKSLEKAEEKKKIISKELQIYENNLNNIENRMETSKYGSVNKKIEEHK 766
Query: 700 TALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLK 759
+ K ++ ++L +Q K I+ L +I + A K + I++L+ +K
Sbjct: 767 NEIDKGRNELSELYKEQKKLTEVIRKLEKDISEYE---ANKDKKEEDLKETIKKLKNKIK 823
Query: 760 QHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTI---EE 816
Q E + +D ++E+ +K S I E+EK+ ++ I +E
Sbjct: 824 QLETEEHKKKEEIDDVLLQIENYKKQKEKETNDLSSTDEIINEIEKKIEDIEKNINITKE 883
Query: 817 LEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEK 876
+++ I++ S F +N E +H ++IEDL K+ + +LK+ + L +K
Sbjct: 884 NLKELENKITELQSSFSSYEN---EMKHVVKKIEDLEKKKSENILDLKKLENTLLDL-QK 939
Query: 877 WLPTLRNLVAQINET 891
L T + V + +T
Sbjct: 940 DLKTSSDTVKYLYKT 954
Score = 104 (41.7 bits), Expect = 4.1e-09, Sum P(3) = 4.1e-09
Identities = 37/178 (20%), Positives = 84/178 (47%)
Query: 650 IEDEAAKLQKEREEIINIVQIEKRKR---REMENHINLRKRKLESIEKEDDINTALAKLV 706
IE+ ++ K R E+ + + +K+ R++E I+ + + +KE+D+ + KL
Sbjct: 762 IEEHKNEIDKGRNELSELYKEQKKLTEVIRKLEKDIS--EYEANKDKKEEDLKETIKKLK 819
Query: 707 DQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEF-DAKIRELEFNLKQHEKLA 765
++ L ++ K EI ++L++I + K EK + D I E+E ++ EK
Sbjct: 820 NKIKQLETEEHKKKEEIDDVLLQIENYK-KQKEKETNDLSSTDEIINEIEKKIEDIEKNI 878
Query: 766 LQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQD 823
+ ++ + ++ + S + + + + +LEK+ E +++LE + D
Sbjct: 879 NITKENLKELENKITELQSSFSSYENEMKHVVKKIEDLEKKKSENILDLKKLENTLLD 936
Score = 77 (32.2 bits), Expect = 2.1e-06, Sum P(3) = 2.1e-06
Identities = 49/232 (21%), Positives = 95/232 (40%)
Query: 667 IVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAADLNIQQFKYAIEIKNL 726
++ EK K ++ + H N K K E EK + A K + +L I Y + N+
Sbjct: 692 LLNYEKYKHKKEQYHDNENKLK-EVSEKLKSLEKAEEKKKIISKELQI----YENNLNNI 746
Query: 727 LVEIVSCKWSYAEKHMASI--EFDAKIRELEFNLKQHEKLA-----LQASL-HYEDCKKE 778
+ + K+ K + E D EL K+ +KL L+ + YE K +
Sbjct: 747 ENRMETSKYGSVNKKIEEHKNEIDKGRNELSELYKEQKKLTEVIRKLEKDISEYEANKDK 806
Query: 779 VEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNI 838
E K K+ I + E K+ E+ + ++E + + N + ++ I
Sbjct: 807 KEEDLKET--IKKLKNKIKQLETEEHKKKEEIDDVLLQIENYKKQKEKETNDLSSTDE-I 863
Query: 839 LQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLVAQINE 890
+ E E + IE + + KEL+ + E+ + + ++++V +I +
Sbjct: 864 INEIEKKIEDIEKNINITKENLKELENKITELQSSFSSYENEMKHVVKKIED 915
Score = 73 (30.8 bits), Expect = 1.0e-05, Sum P(3) = 1.0e-05
Identities = 38/201 (18%), Positives = 93/201 (46%)
Query: 643 MQTEQRLIEDEAAKLQKEREEI---INIVQ--IEKRKRREMENHINLR-----KRKLESI 692
+++E ++ E AK ++ RE+I IN +Q ++ ++ +N+ NL+ K+K+E +
Sbjct: 313 LKSEAKMENKEKAKEKRRREDIKKEINNLQNKLDDYQKNNEKNNKNLKSYEDLKKKIEIL 372
Query: 693 EKE-DDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKI 751
++E ++ + L+ + N + ++KN + + + + +I
Sbjct: 373 KEELNEKQLTMNCLLSAGTNNNEYTGSFREQLKNYKTNLSKAETQINNFLQNNKHLEKEI 432
Query: 752 RELEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFI-TPELEKEFLEM 810
L+ K++EK + S + +K+ + C + L ++ + + T + +K L
Sbjct: 433 MTLKEQRKKYEKEYNEISKEKDIEEKKKKLCEQELDKLNKEYNNFMELDTLKTDKNILY- 491
Query: 811 PTTIEELEAAIQDNISQANSI 831
+E+L+ +Q + NS+
Sbjct: 492 -NDMEKLQQELQVLKNIINSV 511
Score = 71 (30.1 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 33/162 (20%), Positives = 67/162 (41%)
Query: 645 TEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAK 704
+++ +E + ++L+ E + EKR+R +++ IN + KL+ +K ++ N K
Sbjct: 301 SQKEELEKKISQLKSEAKMENKEKAKEKRRREDIKKEINNLQNKLDDYQKNNEKNNKNLK 360
Query: 705 LVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKL 764
+ I+ K + K L + +C S + E+ RE LK ++
Sbjct: 361 SYEDLKK-KIEILKEELNEKQLTM---NCLLSAGTNNN---EYTGSFRE---QLKNYKTN 410
Query: 765 ALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKE 806
+A + + +H K + K Q + E+ KE
Sbjct: 411 LSKAETQINNFLQNNKHLEKEIMTLKEQRKKYEKEYNEISKE 452
Score = 63 (27.2 bits), Expect = 2.9e-18, Sum P(3) = 2.9e-18
Identities = 43/161 (26%), Positives = 76/161 (47%)
Query: 369 KIEKLGSQI-LELGVQANQKRLQKSEKEKILN-QNKLTLRQCSDRLKDMEDKNNKLLHAL 426
KI +L S+ +E +A +KR ++ K++I N QNKL D K+ E KNNK L +
Sbjct: 309 KISQLKSEAKMENKEKAKEKRRREDIKKEINNLQNKL-----DDYQKNNE-KNNKNLKSY 362
Query: 427 RNSGAENIFEAYCWLQQHRHELN-KEAYGPVLLEVNVSNRAHANYLEDHVGHYIWKSFIT 485
E++ + ++ + ELN K+ LL +N + + + +Y K+ ++
Sbjct: 363 -----EDLKKK---IEILKEELNEKQLTMNCLLSAGTNNNEYTGSFREQLKNY--KTNLS 412
Query: 486 Q-DAGDRDFLAKNLKPFDVPILNYVSNESS-RKEPFQISEE 524
+ + +FL N K + I+ KE +IS+E
Sbjct: 413 KAETQINNFLQNN-KHLEKEIMTLKEQRKKYEKEYNEISKE 452
Score = 60 (26.2 bits), Expect = 5.9e-18, Sum P(3) = 5.9e-18
Identities = 23/88 (26%), Positives = 40/88 (45%)
Query: 368 DKIEKLGSQ--ILELGVQANQKRLQKS--EKEKILNQNKLTLRQCSDRLKDMEDKNNKLL 423
+KIE S+ ILE G++ K ++K EKEKI+ + + E+ K+
Sbjct: 252 EKIEDAKSEEKILEKGIKEIDKDIEKYKIEKEKIVKETNTASEPMKILISQKEELEKKIS 311
Query: 424 HALRNSGAENIFEAYCWLQQHRHELNKE 451
+ EN +A ++ R ++ KE
Sbjct: 312 QLKSEAKMENKEKAK--EKRRREDIKKE 337
Score = 60 (26.2 bits), Expect = 9.9e-05, Sum P(3) = 9.9e-05
Identities = 35/183 (19%), Positives = 80/183 (43%)
Query: 644 QTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTA-- 701
+ E ++ E +++ E E + +IE ++++ EN ++L+K + ++ + D+ T+
Sbjct: 887 ELENKITELQSSFSSYENEMKHVVKKIEDLEKKKSENILDLKKLENTLLDLQKDLKTSSD 946
Query: 702 LAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQH 761
K + + + I+ ++ K + + + +K + +++ + + N K
Sbjct: 947 TVKYLYKT-HVWIESYEPLFNKKYTPYDFENFRHDVIQKKIQALQNEQNKLSININRKAV 1005
Query: 762 EKLALQASLHYEDC---KKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELE 818
+ Q + Y+D K +VE D K+ E IA + + + L M I E
Sbjct: 1006 QMYE-QVQVDYKDLVTKKSQVEE------DKKKIQEVIADLDVKKSESLLAMYQQINEYF 1058
Query: 819 AAI 821
AI
Sbjct: 1059 QAI 1061
Score = 60 (26.2 bits), Expect = 9.9e-05, Sum P(3) = 9.9e-05
Identities = 48/220 (21%), Positives = 92/220 (41%)
Query: 643 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTAL 702
++ E ++++ K +KE EI IE++K++ E ++ ++ + + D + T
Sbjct: 428 LEKEIMTLKEQRKKYEKEYNEISKEKDIEEKKKKLCEQELDKLNKEYNNFMELDTLKTDK 487
Query: 703 AKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYA-EKHMASIEFDAKIREL-----EF 756
L + L Q+ + +KN+ I S K Y +M S + +I +L E+
Sbjct: 488 NILYNDMEKLQ-QELQV---LKNI---INSVKIDYKIPSNMKSTDVLGQIYKLIKIKKEY 540
Query: 757 -NLKQHEKLALQASLHYEDCKKEVEHCRK-----HLSDAKRQAESIAFITPELEKEFLEM 810
N L L L Y + + EH ++ + S ++ + + +E E
Sbjct: 541 INTALAVHLILGGKLTYLLVQNK-EHSKRLFEYNNFSSGSKRVTLLPLEDCVISREVHEK 599
Query: 811 PTTIEELEAAIQDNISQANS-IFFLNQNILQEYEHRQRQI 849
IEE + NI N I+FL+ + EY+ +I
Sbjct: 600 H--IEECRRNVGLNIKDKNDVIYFLD---IMEYDKNLERI 634
Score = 56 (24.8 bits), Expect = 5.0e-11, Sum P(3) = 5.0e-11
Identities = 22/84 (26%), Positives = 43/84 (51%)
Query: 163 PVKLL----EETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTL-NQLKALNVEQ 217
P+K+L EE EK + QL + ++ +K K +K+ + L N+L
Sbjct: 295 PMKILISQKEELEKKIS--QLKSEAKMENKEKAKEKRRREDIKKEINNLQNKLDDYQKNN 352
Query: 218 EKDVERVRQRAELLEKVESMKKKL 241
EK+ + ++ +L +K+E +K++L
Sbjct: 353 EKNNKNLKSYEDLKKKIEILKEEL 376
Score = 56 (24.8 bits), Expect = 0.00025, Sum P(3) = 0.00025
Identities = 26/143 (18%), Positives = 59/143 (41%)
Query: 752 RELEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPEL---EKEFL 808
+ + L +EK + Y D + +++ + L ++ E I+ EL E
Sbjct: 686 KNINLFLLNYEKYKHKKE-QYHDNENKLKEVSEKLKSLEKAEEKKKIISKELQIYENNLN 744
Query: 809 EMPTTIEELE-AAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFL 867
+ +E + ++ I + + +N L E Q+++ ++ K E K++ +
Sbjct: 745 NIENRMETSKYGSVNKKIEEHKNEIDKGRNELSELYKEQKKLTEVIRKLE---KDISEYE 801
Query: 868 AEIDALKEKWLPTLRNLVAQINE 890
A D +E T++ L +I +
Sbjct: 802 ANKDKKEEDLKETIKKLKNKIKQ 824
Score = 51 (23.0 bits), Expect = 1.6e-10, Sum P(3) = 1.6e-10
Identities = 29/130 (22%), Positives = 53/130 (40%)
Query: 188 EKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAE----LLEKVESMKKKLPW 243
+ S+ K +E +K + + K +E+EK V+ +E L+ + E ++KK+
Sbjct: 256 DAKSEEKILEKGIKEIDKDIEKYK---IEKEKIVKETNTASEPMKILISQKEELEKKISQ 312
Query: 244 LKYD--MKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILD-GDCKKLSS 300
LK + M+ E N L ++ K +K K + D KK
Sbjct: 313 LKSEAKMENKEKAKEKRRREDIKKEINNLQNKLDDYQK--NNEKNNKNLKSYEDLKKKIE 370
Query: 301 LINE--NSKR 308
++ E N K+
Sbjct: 371 ILKEELNEKQ 380
Score = 47 (21.6 bits), Expect = 1.3e-16, Sum P(3) = 1.3e-16
Identities = 12/51 (23%), Positives = 28/51 (54%)
Query: 371 EKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNK 421
+KL I +L ++ K +KE+ L + T+++ +++K +E + +K
Sbjct: 784 KKLTEVIRKLEKDISEYEANKDKKEEDLKE---TIKKLKNKIKQLETEEHK 831
Score = 45 (20.9 bits), Expect = 2.0e-16, Sum P(3) = 2.0e-16
Identities = 12/32 (37%), Positives = 20/32 (62%)
Query: 391 KSEKEKIL-NQNKLTLRQCSDRLKDMEDKNNK 421
K +KE+ N+NKL ++ S++LK +E K
Sbjct: 699 KHKKEQYHDNENKL--KEVSEKLKSLEKAEEK 728
Score = 45 (20.9 bits), Expect = 6.0e-10, Sum P(2) = 6.0e-10
Identities = 19/92 (20%), Positives = 38/92 (41%)
Query: 216 EQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAEYIXXXXXXXXXXXXXXXXXNTLH 275
+ E ++ V ++ + LEK E KKK+ + +++ E +
Sbjct: 707 DNENKLKEVSEKLKSLEKAEE-KKKI--ISKELQIYENNLNNIENRMETSKYGSVNKKIE 763
Query: 276 EFSKPIEGKKQEKAILDGDCKKLSSLINENSK 307
E I+ + E + L + KKL+ +I + K
Sbjct: 764 EHKNEIDKGRNELSELYKEQKKLTEVIRKLEK 795
Score = 45 (20.9 bits), Expect = 6.4e-10, Sum P(3) = 6.4e-10
Identities = 18/64 (28%), Positives = 27/64 (42%)
Query: 191 SKLKT-IECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMK 249
SK +T I ++ N ++ L EQ K E+ + +E KKKL + D
Sbjct: 412 SKAETQINNFLQNNKHLEKEIMTLK-EQRKKYEKEYNEISKEKDIEEKKKKLCEQELDKL 470
Query: 250 KAEY 253
EY
Sbjct: 471 NKEY 474
Score = 40 (19.1 bits), Expect = 6.5e-16, Sum P(3) = 6.5e-16
Identities = 12/46 (26%), Positives = 21/46 (45%)
Query: 368 DKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLK 413
DK+ K + +EL K + ++ EK L Q L+ + +K
Sbjct: 468 DKLNKEYNNFMELDTLKTDKNILYNDMEK-LQQELQVLKNIINSVK 512
Score = 38 (18.4 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 6/16 (37%), Positives = 10/16 (62%)
Query: 426 LRNSGAENIFEAYCWL 441
L SG N+ +A C++
Sbjct: 33 LNGSGKSNVLDAICFV 48
>CGD|CAL0003255 [details] [associations]
symbol:SMC6 species:5476 "Candida albicans" [GO:0003684
"damaged DNA binding" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0035861 "site of
double-strand break" evidence=IEA] [GO:0030915 "Smc5-Smc6 complex"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0051276 "chromosome organization"
evidence=IEA] [GO:0071139 "resolution of recombination
intermediates" evidence=IEA] [GO:0000724 "double-strand break
repair via homologous recombination" evidence=IEA]
InterPro:IPR027132 CGD:CAL0003255 EMBL:AACQ01000020
EMBL:AACQ01000016 eggNOG:COG1196 PANTHER:PTHR19306:SF2
RefSeq:XP_720891.1 RefSeq:XP_721404.1 RefSeq:XP_888781.1
ProteinModelPortal:Q5AGX1 STRING:Q5AGX1 GeneID:3637039
GeneID:3637516 GeneID:3704092 KEGG:cal:CaO19.13921
KEGG:cal:CaO19.6568 KEGG:cal:CaO19_6568 Uniprot:Q5AGX1
Length = 1128
Score = 178 (67.7 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 75/309 (24%), Positives = 128/309 (41%)
Query: 14 GEDDYMPGNIIEIELHNFMTFDHLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQL 73
G D G I ++ L NFM D K G +LN +IG NGSGKS+++ I++ LG
Sbjct: 97 GSDPAKAGVIEKLTLKNFMCHDSFELKLGPQLNFIIGRNGSGKSAILTGISVGLGAKATD 156
Query: 74 LGRATSIGAYVKRGEESGYIKISLRGDTKEEH--------LTIMRKIDTRNKSEWFFN-- 123
R ++I +K G+ + I + L+ + + + + I RK+ + +
Sbjct: 157 TNRGSTIRDLIKDGKSTSRITVVLKNEGSDAYKPDVFGKKIIIERKLQRSGSNTYSIKNE 216
Query: 124 -GKVVP-KGEVL-EITKRFNIQVNNLTQFLPQDRVCEFAKLSPVK-LLEETEKAVGDPQL 179
GKVV K VL EI +F+I ++N FL QD+ EF S K E +
Sbjct: 217 AGKVVSNKKSVLDEILYKFSITIDNPLAFLSQDKAREFLTSSSDKNKYEYFMDGAFITDI 276
Query: 180 PVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERV----RQRAELLEKVE 235
+ ++ S+ ++ ++ V++ + K ++ K + +V R L K+E
Sbjct: 277 LENYTSI---SNNVQVLDNKVRQAEEYTKVAK----QEYKAIAKVHNAHRTNDALRNKLE 329
Query: 236 SMKKKLPWLKYDMKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDC 295
+ K+ W + + N + K IE K K D
Sbjct: 330 MLNAKIYWFNVQTIEKKIDQENRQKDTCLQEIEQAKNQIDVCEKEIEAKIPRKDAADQQV 389
Query: 296 KKLSSLINE 304
K++ S I +
Sbjct: 390 KEVESQIKD 398
Score = 132 (51.5 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 75/353 (21%), Positives = 155/353 (43%)
Query: 666 NIVQIEKRKRREMENHINLRK--RKLESIEKE-DDINTALAKLV--DQAADLNIQQFKYA 720
N+ Q+ KR R +E+ + + + ++E +D N + +LV ++A N+ Q
Sbjct: 765 NLDQL-KRNRSTLEDQLEVEVDYSNITTLEARIEDNNEQIRRLVALNEALLENLSQMNE- 822
Query: 721 IEIKNLLVEIVSCKWSYAEKHMASIE-FDAKIRELEFNLKQHEKLALQASLHYEDCKKEV 779
K+L +I CK S KH E F ++ E+E ++ E L + + + +
Sbjct: 823 -NYKDLKQQIEDCK-SKKVKHETIREKFVKQLVEIETEIETQEDLKKRYLYKITELEDRI 880
Query: 780 EHCRKHLSDAKRQAES-IAFITPELEKEFLEM-PTTIEELEAA-IQD---NISQANSIFF 833
+ L++ R+ E +A ++ + + P +E A Q+ ++ +A S
Sbjct: 881 KRADDILAEGNRKLEEFVAKAEEHCSRDRVTIYPNDTQETIAQDYQETRFDLERAESALG 940
Query: 834 LN-QNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTL-RNLVAQINET 891
+ + +L + E + + + + E+ ++ AE++A + +L T+ ++ + + T
Sbjct: 941 TSLEEVLDQLEKAKAKCDKAEGELESLSSASRKLNAEVNA-RFNFLHTIIQSSIQEAKRT 999
Query: 892 FSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVL-SAHHQSGGERSVSTIL 950
F + G + D F + + + V Q+G E + SGGE+S S I
Sbjct: 1000 FEKAMWLRGFQGTLKFD-----FAEKTLQLNV---QTGNDEKKRTVESLSGGEKSFSQIA 1051
Query: 951 YLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTPQCFLLTPK 1003
L+S+ + N R +DE + MD +N + L++ + Q +TP+
Sbjct: 1052 LLLSIWKVMNSRIRGLDEFDVYMDSVNRSISIKLLLKELKRYPKSQNIFITPQ 1104
Score = 99 (39.9 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 95/453 (20%), Positives = 169/453 (37%)
Query: 75 GRATSIGAYVKRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFN---GKVVP-KG 130
G++TS V + E S K + G + + I RK+ + + GKVV K
Sbjct: 170 GKSTSRITVVLKNEGSDAYKPDVFG----KKIIIERKLQRSGSNTYSIKNEAGKVVSNKK 225
Query: 131 EVL-EITKRFNIQVNNLTQFLPQDRVCEFAKLSPVK-LLEETEKAVGDPQLPVQHCALVE 188
VL EI +F+I ++N FL QD+ EF S K E + + ++
Sbjct: 226 SVLDEILYKFSITIDNPLAFLSQDKAREFLTSSSDKNKYEYFMDGAFITDILENYTSI-- 283
Query: 189 KSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERV----RQRAELLEKVESMKKKLPWL 244
S+ ++ ++ V++ + K ++ K + +V R L K+E + K+ W
Sbjct: 284 -SNNVQVLDNKVRQAEEYTKVAK----QEYKAIAKVHNAHRTNDALRNKLEMLNAKIYWF 338
Query: 245 KYDMKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINE 304
+ + N + K IE K K D K++ S I +
Sbjct: 339 NVQTIEKKIDQENRQKDTCLQEIEQAKNQIDVCEKEIEAKIPRKDAADQQVKEVESQIKD 398
Query: 305 NSKRRMDFLEK-VDQGVQVQGKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPA- 362
+ K + +++ K I + Q +
Sbjct: 399 IVEEFEGLRSKRSEMKSELEINKKETKKNIDEMNSLKEDITRTETKIEQERRRIQELQGG 458
Query: 363 -YEPPHDKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNK 421
E +++EKL S+I EL Q + Q E + N + LR S + + K
Sbjct: 459 NKEKMAEELEKLNSEIDELESQLENLKKQLVEMQD--NPDP-ELRSVSQQREKSRQKIAD 515
Query: 422 LLHALRNSGAENIFEAYCWLQQ--------HRH-ELNKEAYGPVLLEVNVSNRAHANY-- 470
L + R E++ + W + RH + +E GP+ ++V N+ + N+
Sbjct: 516 LQNQKRQLEKESVSKYSPWGSRMAELIKAIKRHPDWVQEPIGPIGSYIHVKNQ-YNNWKP 574
Query: 471 LEDHVGHYIWKSFITQDAGDRDFLAKNLKPFDV 503
L + + SFI + GDR L + LK + +
Sbjct: 575 LLSTILNKTLDSFIVTNEGDRSRLDRLLKQYQI 607
Score = 78 (32.5 bits), Expect = 4.6e-12, Sum P(2) = 4.6e-12
Identities = 48/200 (24%), Positives = 96/200 (48%)
Query: 650 IEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQA 709
+ D + LQ+E +E E R + ++E K KL++ K D++ + ++ + +
Sbjct: 716 MSDLISDLQRELDE-------EHRHQNDLERRARSIKMKLDA--KRDNL-VSESRAIKRN 765
Query: 710 ADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFD-AKIREL-EFNLKQHEKLALQ 767
D +++ + +E L VE+ +S A IE + +IR L N E L+ Q
Sbjct: 766 LD-QLKRNRSTLE-DQLEVEV---DYSNITTLEARIEDNNEQIRRLVALNEALLENLS-Q 819
Query: 768 ASLHYEDCKKEVEHCR----KHLSDAKRQAESIAFITPELE-KEFLEMPTTIEELEAAIQ 822
+ +Y+D K+++E C+ KH + ++ + + I E+E +E L+ + E ++
Sbjct: 820 MNENYKDLKQQIEDCKSKKVKHETIREKFVKQLVEIETEIETQEDLKKRYLYKITE--LE 877
Query: 823 DNISQANSIFFLNQNILQEY 842
D I +A+ I L+E+
Sbjct: 878 DRIKRADDILAEGNRKLEEF 897
Score = 71 (30.1 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 43/200 (21%), Positives = 90/200 (45%)
Query: 66 ALGGDTQLL-GRATSIGAYVKRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNG 124
++ + Q+L + Y K ++ Y I+ + + + K++ N ++FN
Sbjct: 282 SISNNVQVLDNKVRQAEEYTKVAKQE-YKAIAKVHNAHRTNDALRNKLEMLNAKIYWFNV 340
Query: 125 KVVPKGEVLEITKRFNIQVNNLTQFLPQDRVCEF---AKLSPVKLLEETEKAVGDPQLP- 180
+ + K ++ + ++ + + + Q Q VCE AK+ ++ K V + Q+
Sbjct: 341 QTIEK-KIDQENRQKDTCLQEIEQAKNQIDVCEKEIEAKIPRKDAADQQVKEV-ESQIKD 398
Query: 181 -VQHC-ALVEKSSKLKT-IECT---VKRNGDTLNQLKALNVEQEKDVERVRQRAELLE-- 232
V+ L K S++K+ +E K+N D +N LK E +E+ R+R + L+
Sbjct: 399 IVEEFEGLRSKRSEMKSELEINKKETKKNIDEMNSLKEDITRTETKIEQERRRIQELQGG 458
Query: 233 KVESMKKKLPWLKYDMKKAE 252
E M ++L L ++ + E
Sbjct: 459 NKEKMAEELEKLNSEIDELE 478
Score = 46 (21.3 bits), Expect = 9.3e-09, Sum P(2) = 9.3e-09
Identities = 12/66 (18%), Positives = 34/66 (51%)
Query: 643 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLE--SIEKEDDINT 700
++++ ++ + ++Q + + V ++ K R+ + +KR+LE S+ K +
Sbjct: 477 LESQLENLKKQLVEMQDNPDPELRSVSQQREKSRQKIADLQNQKRQLEKESVSKYSPWGS 536
Query: 701 ALAKLV 706
+A+L+
Sbjct: 537 RMAELI 542
>UNIPROTKB|Q81ZL2 [details] [associations]
symbol:smc "Chromosome partition protein Smc"
species:227377 "Coxiella burnetii RSA 493" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR024704 HAMAP:MF_01894
InterPro:IPR010935 InterPro:IPR011890 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0005737 GO:GO:0005694 GO:GO:0003677
GO:GO:0006281 EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0006310
GO:GO:0030261 GO:GO:0007062 eggNOG:COG1196 SUPFAM:SSF75553
KO:K03529 TIGRFAMs:TIGR02168 EMBL:AJ543641 RefSeq:NP_819572.1
HSSP:Q9X0R4 ProteinModelPortal:Q81ZL2 PRIDE:Q81ZL2 GeneID:1208425
KEGG:cbu:CBU_0540 PATRIC:17929777 HOGENOM:HOG000036391 OMA:WARISKL
ProtClustDB:CLSK914134 BioCyc:CBUR227377:GJ7S-543-MONOMER
Uniprot:Q81ZL2
Length = 1169
Score = 182 (69.1 bits), Expect = 2.3e-17, Sum P(3) = 2.3e-17
Identities = 79/351 (22%), Positives = 162/351 (46%)
Query: 648 RLIE--DEAAKLQKEREEI-INIVQIEKRKRREMENHINLRKRKLESI-EKEDDINTALA 703
+LIE ++A + +KE +E+ I + E + + + +R+L+ + E+ + ++ L+
Sbjct: 788 QLIELREKAHQKRKEADELEIRLASNEDQLSL-LRQTVARDQRQLKQLTERREMLSQYLS 846
Query: 704 KLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEK 763
+ +LN ++ + +E + L++E + EK + E + +R LE +K
Sbjct: 847 EGDKPLEELN-EKLQTQLE-QRLILET---ELREVEKELE--EANQLLRHLEEKRVSTQK 899
Query: 764 LALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMP--TTIEELEAAI 821
+A E+ + + + + K Q F +LE+ E+P TIE + +
Sbjct: 900 ALNEAQAQLEELRMQRQTVSVRQTTIKEQLSENDF---DLEQVMAELPEEATIESWQEKL 956
Query: 822 QDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAE-IDALKEKWLPT 880
+ + + +N ++EYE + L KQ AD E L I + +
Sbjct: 957 DQLVERIQRMGPINLAAIEEYESVNERKNYLD-KQHADLTEALEILKNAIHKIDRETRAK 1015
Query: 881 LRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVLSAHHQS 940
+ Q+N+ F F + G +L+ ++D G++++ + G+ V + H S
Sbjct: 1016 FQETYDQVNQQFQSLFPRIFGGGRATLEMTDTDLLTAGVIVRAQ--PPGKRNV-TIHMLS 1072
Query: 941 GGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQ 991
GGE++++ + + SL L PF ++DE++ +D IN + F QLV+ S+
Sbjct: 1073 GGEKALTAVALVFSLFQLNPAPFCILDEVDAPLDDINVGR-FCQLVKEMSK 1122
Score = 120 (47.3 bits), Expect = 2.3e-17, Sum P(3) = 2.3e-17
Identities = 56/246 (22%), Positives = 102/246 (41%)
Query: 26 IELHNFMTF-DHLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSIGAYV 84
I+L F +F D + +N ++GPNG GKS++V A+ +G + R S+ +
Sbjct: 6 IKLAGFKSFVDPTLIPIRGSMNAIVGPNGCGKSNVVDAVRWVIGETSAKQLRGQSMSDVI 65
Query: 85 KRGEES----GYIKISLRGDTKE-----EH-----LTIMRKIDTRNKSEWFFNGKVVPKG 130
G S G I L D E E+ + I R+++ +S +F NG V +
Sbjct: 66 FNGTTSRKPVGKASIELHFDNSEGRIGGEYAKYGEIAIRREVERDGQSNYFINGAHVRRR 125
Query: 131 EVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKS 190
+V+++ + + + Q + + P +L E+A G + + E
Sbjct: 126 DVVDVFLGTGLGPRSYA-IVEQGMISNLIEAKPEELRVYIEEAAGISKYKERRR---ETE 181
Query: 191 SKLKTIECTVKRNGDTLNQL-KALN--VEQEKDVERVRQRAELLEKVESMKKKLPWLKYD 247
S+++ + + R D +L K L Q ER + + + + K L W D
Sbjct: 182 SRMRHTQENLDRVNDIAEELAKQLRHLKRQANAAERYKAYKQEERALGAQFKVLQWKALD 241
Query: 248 MKKAEY 253
K +E+
Sbjct: 242 HKLSEH 247
Score = 107 (42.7 bits), Expect = 7.1e-09, Sum P(2) = 7.1e-09
Identities = 55/248 (22%), Positives = 110/248 (44%)
Query: 644 QTEQRLIEDEAAKLQKEREEIINIVQ----IEKRKRREMENHINLRKRKLESIEKEDDIN 699
Q+EQ IE E ++K RE++ ++ + ++KR + L +R ++ EK
Sbjct: 262 QSEQHRIETE---IEKMREQLTDVNEKHNAVQKRYYGLGADIARLEQRIKDTQEKIHQWQ 318
Query: 700 TALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLK 759
+ L + + +L + +I L E+ K ++ H A+ E ++ + E N+
Sbjct: 319 SELEENENVWEELQNNTAECEAQITELETELEHLKPRSSDIHSAAAEASKELAQAESNMA 378
Query: 760 QHEKL--ALQASLHYEDCKKEV-----EHCRKHLSDAKRQAESIAFITPELE-----KEF 807
+ ++ A QA + EV EHC + L+D ++ + + +L+ E
Sbjct: 379 RWQEAWEAFQAETSQTMSQLEVMRTKREHCERQLTDLEKSKQQLQQNLKQLQLDQLLNEI 438
Query: 808 LEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFL 867
+ + E L A + D+ S+ S L + I + Q E+L T Q + + L+
Sbjct: 439 APLSSQSELLNAELSDSQSKLQS---LAETIASRRDANQTTREELQT-QRRELQALEARA 494
Query: 868 AEIDALKE 875
A ++AL++
Sbjct: 495 ASLEALQK 502
Score = 92 (37.4 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 48/234 (20%), Positives = 99/234 (42%)
Query: 674 KRREMENHINLRKRKLESIEKEDD-INTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVS 732
K E + IN + + E + E I T + K+ +Q D+N + L +I
Sbjct: 243 KLSEHDQAINQKNTRREEKQSEQHRIETEIEKMREQLTDVNEKHNAVQKRYYGLGADIAR 302
Query: 733 CKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQ 792
E+ + + KI + + L+++E + + + +C+ ++ L K +
Sbjct: 303 L-----EQRIKDTQ--EKIHQWQSELEENENVWEELQNNTAECEAQITELETELEHLKPR 355
Query: 793 AESIAFITPELEKEFLEMPTTI---EELEAAIQDNISQANSIFFLNQNILQEYEHRQRQI 849
+ I E KE + + + +E A Q SQ S + + + EH +RQ+
Sbjct: 356 SSDIHSAAAEASKELAQAESNMARWQEAWEAFQAETSQTMSQLEVMRT---KREHCERQL 412
Query: 850 EDLSTKQEADKKELKRFLAEIDALKEKWLPTLRN---LVAQINETFSRNFQEMA 900
DL ++ ++ LK+ ++D L + P L A+++++ S+ Q +A
Sbjct: 413 TDLEKSKQQLQQNLKQL--QLDQLLNEIAPLSSQSELLNAELSDSQSK-LQSLA 463
Score = 89 (36.4 bits), Expect = 1.1e-07, Sum P(3) = 1.1e-07
Identities = 48/257 (18%), Positives = 107/257 (41%)
Query: 650 IEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQA 709
++D L REE+I + + E+ + ++++ + +E N L+ Q
Sbjct: 764 LDDSQGLLATRREEMIRERDHYRTQLIELREKAHQKRKEADELEIRLASNEDQLSLLRQT 823
Query: 710 ADLNIQQFKYAIEIKNLLVEIVS--CK--WSYAEKHMASIE----FDAKIRELEFNLKQH 761
+ +Q K E + +L + +S K EK +E + ++RE+E L++
Sbjct: 824 VARDQRQLKQLTERREMLSQYLSEGDKPLEELNEKLQTQLEQRLILETELREVEKELEEA 883
Query: 762 EKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAI 821
+L +K + + L + + Q ++++ ++++ E +E++ A +
Sbjct: 884 NQLLRHLEEKRVSTQKALNEAQAQLEELRMQRQTVSVRQTTIKEQLSENDFDLEQVMAEL 943
Query: 822 QDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTL 881
+ + + L+Q L E R I + ++ E K +L + A + L L
Sbjct: 944 PEEATIESWQEKLDQ--LVERIQRMGPINLAAIEEYESVNERKNYLDKQHADLTEALEIL 1001
Query: 882 RNLVAQINETFSRNFQE 898
+N + +I+ FQE
Sbjct: 1002 KNAIHKIDRETRAKFQE 1018
Score = 85 (35.0 bits), Expect = 2.7e-07, Sum P(3) = 2.7e-07
Identities = 56/303 (18%), Positives = 134/303 (44%)
Query: 651 EDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAA 710
E + +L+ +R+ ++ Q + +++ ++ ++ +L++ +++ T L K+
Sbjct: 688 EQQLNQLETDRDTLLQTYQKLNAEATTVQSALSTKQAQLDNAQQQQ---TRL-KIGLNEC 743
Query: 711 DLNIQQFKYAIE-IKNLLVEIVSCKWSYAEKHMASI-EFDA-KIRELEFNLKQHEKL--A 765
+ I+Q + + IKN + + A + I E D + + +E K H+K A
Sbjct: 744 EQQIEQCQQQLTLIKNKASSLDDSQGLLATRREEMIRERDHYRTQLIELREKAHQKRKEA 803
Query: 766 LQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNI 825
+ + + ++ R+ ++ +RQ + + L + E +EEL +Q +
Sbjct: 804 DELEIRLASNEDQLSLLRQTVARDQRQLKQLTERREMLSQYLSEGDKPLEELNEKLQTQL 863
Query: 826 SQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALK-EKWLPTLRNL 884
Q + + + +E E + + L K+ + +K L A+++ L+ ++ ++R
Sbjct: 864 EQRLILETELREVEKELEEANQLLRHLEEKRVSTQKALNEAQAQLEELRMQRQTVSVRQT 923
Query: 885 VAQINETFSRN-FQEMAVAGEVSLDEH-ESDFDKFGILIKVKFRQSGQLEVLSAH-HQSG 941
I E S N F V E+ + ES +K L++ + ++ G + + + ++S
Sbjct: 924 T--IKEQLSENDFDLEQVMAELPEEATIESWQEKLDQLVE-RIQRMGPINLAAIEEYESV 980
Query: 942 GER 944
ER
Sbjct: 981 NER 983
Score = 78 (32.5 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 43/216 (19%), Positives = 88/216 (40%)
Query: 678 MENHINLRKRKLESIEKEDDINTAL-AKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWS 736
+E I + K+ + E + N + +L + A+ Q + E+++L +
Sbjct: 303 LEQRIKDTQEKIHQWQSELEENENVWEELQNNTAECEAQITELETELEHLKPRSSDIHSA 362
Query: 737 YAE--KHMASIEFDAKIRELEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAE 794
AE K +A E + + + Q E + L K+E HC + L+D ++ +
Sbjct: 363 AAEASKELAQAESNMARWQEAWEAFQAETSQTMSQLEVMRTKRE--HCERQLTDLEKSKQ 420
Query: 795 SIAFITPELE-----KEFLEMPTTIEELEAAIQDNISQANSIFFL-------NQNILQEY 842
+ +L+ E + + E L A + D+ S+ S+ NQ +E
Sbjct: 421 QLQQNLKQLQLDQLLNEIAPLSSQSELLNAELSDSQSKLQSLAETIASRRDANQTTREEL 480
Query: 843 EHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWL 878
+ ++R+++ L + + + K L E D +WL
Sbjct: 481 QTQRRELQALEARAASLEALQKAALGESDGKISEWL 516
Score = 67 (28.6 bits), Expect = 1.6e-05, Sum P(3) = 1.6e-05
Identities = 20/77 (25%), Positives = 41/77 (53%)
Query: 644 QTEQRLI-EDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKE-DDINTA 701
Q EQRLI E E +++KE EE +++ + KR + +N + +LE + + ++
Sbjct: 862 QLEQRLILETELREVEKELEEANQLLRHLEEKRVSTQKALNEAQAQLEELRMQRQTVSVR 921
Query: 702 LAKLVDQAA--DLNIQQ 716
+ +Q + D +++Q
Sbjct: 922 QTTIKEQLSENDFDLEQ 938
Score = 54 (24.1 bits), Expect = 2.3e-17, Sum P(3) = 2.3e-17
Identities = 11/48 (22%), Positives = 26/48 (54%)
Query: 385 NQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAE 432
NQK ++ EK+ ++ + + + ++L D+ +K+N + GA+
Sbjct: 252 NQKNTRREEKQSEQHRIETEIEKMREQLTDVNEKHNAVQKRYYGLGAD 299
Score = 52 (23.4 bits), Expect = 2.6e-05, Sum P(3) = 2.6e-05
Identities = 19/55 (34%), Positives = 32/55 (58%)
Query: 375 SQILELGVQANQKRLQKSEKEKIL--NQNKLTL-RQCSDR----LKDMEDKNNKL 422
+Q++EL +A+QKR + E E L N+++L+L RQ R LK + ++ L
Sbjct: 787 TQLIELREKAHQKRKEADELEIRLASNEDQLSLLRQTVARDQRQLKQLTERREML 841
Score = 49 (22.3 bits), Expect = 2.4e-09, Sum P(3) = 2.4e-09
Identities = 19/85 (22%), Positives = 37/85 (43%)
Query: 169 ETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRA 228
ETE P+ H A E S +L E + R + +A + +E +R +
Sbjct: 346 ETELEHLKPRSSDIHSAAAEASKELAQAESNMARWQEAWEAFQAETSQTMSQLEVMRTKR 405
Query: 229 ELLEK-VESMKKKLPWLKYDMKKAE 252
E E+ + ++K L+ ++K+ +
Sbjct: 406 EHCERQLTDLEKSKQQLQQNLKQLQ 430
Score = 46 (21.3 bits), Expect = 1.5e-16, Sum P(3) = 1.5e-16
Identities = 19/99 (19%), Positives = 46/99 (46%)
Query: 371 EKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSG 430
+KL ++ + + K+ Q ++ + K+ L +C +++ + + L ++N
Sbjct: 706 QKLNAEATTVQSALSTKQAQLDNAQQQQTRLKIGLNECEQQIEQCQQQ----LTLIKNK- 760
Query: 431 AENIFEAYCWLQQHRHELNKEA--YGPVLLEVNVSNRAH 467
A ++ ++ L R E+ +E Y L+E+ +AH
Sbjct: 761 ASSLDDSQGLLATRREEMIRERDHYRTQLIELR--EKAH 797
Score = 45 (20.9 bits), Expect = 6.1e-09, Sum P(3) = 6.1e-09
Identities = 14/59 (23%), Positives = 30/59 (50%)
Query: 178 QLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVE-QEKDVERVRQRAELLEKVE 235
Q + + L + SKL+++ T+ D NQ ++ Q ++++ + RA LE ++
Sbjct: 444 QSELLNAELSDSQSKLQSLAETIASRRDA-NQTTREELQTQRRELQALEARAASLEALQ 501
Score = 44 (20.5 bits), Expect = 2.4e-16, Sum P(3) = 2.4e-16
Identities = 19/69 (27%), Positives = 37/69 (53%)
Query: 358 QTVPAYEPPHDKIEKLGSQILELGVQANQKRLQKSEKEKILNQ--NKLT-LRQCSDRLK- 413
QT+ E K E Q+ +L + ++++LQ++ K+ L+Q N++ L S+ L
Sbjct: 393 QTMSQLEVMRTKREHCERQLTDL--EKSKQQLQQNLKQLQLDQLLNEIAPLSSQSELLNA 450
Query: 414 DMEDKNNKL 422
++ D +KL
Sbjct: 451 ELSDSQSKL 459
Score = 41 (19.5 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 29/104 (27%), Positives = 45/104 (43%)
Query: 367 HDKIEKLGSQILELGVQANQKRLQKSEK--EKILN-QNKLTLRQCSD-RLKDMEDKNNKL 422
+D E+L Q+ L QAN K+ K E+ L Q K+ + D +L + + N+
Sbjct: 195 NDIAEELAKQLRHLKRQANAAERYKAYKQEERALGAQFKVLQWKALDHKLSEHDQAINQ- 253
Query: 423 LHALRNSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRA 466
+N+ E E +QHR E E L +VN + A
Sbjct: 254 ----KNTRRE---EKQS--EQHRIETEIEKMREQLTDVNEKHNA 288
Score = 40 (19.1 bits), Expect = 6.1e-16, Sum P(3) = 6.1e-16
Identities = 14/64 (21%), Positives = 28/64 (43%)
Query: 391 KSEKEKILNQNKL--TLRQ-CSDRLKDMEDKNNKLLHALRNSGAENIFEAYCWLQQHRHE 447
++E + ++Q ++ T R+ C +L D+E +L L+ + + L
Sbjct: 388 QAETSQTMSQLEVMRTKREHCERQLTDLEKSKQQLQQNLKQLQLDQLLNEIAPLSSQSEL 447
Query: 448 LNKE 451
LN E
Sbjct: 448 LNAE 451
>TIGR_CMR|CBU_0540 [details] [associations]
symbol:CBU_0540 "SMC family protein" species:227377
"Coxiella burnetii RSA 493" [GO:0000910 "cytokinesis" evidence=ISS]
[GO:0003674 "molecular_function" evidence=ND] InterPro:IPR024704
HAMAP:MF_01894 InterPro:IPR010935 InterPro:IPR011890 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0005737 GO:GO:0005694 GO:GO:0003677
GO:GO:0006281 EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0006310
GO:GO:0030261 GO:GO:0007062 eggNOG:COG1196 SUPFAM:SSF75553
KO:K03529 TIGRFAMs:TIGR02168 EMBL:AJ543641 RefSeq:NP_819572.1
HSSP:Q9X0R4 ProteinModelPortal:Q81ZL2 PRIDE:Q81ZL2 GeneID:1208425
KEGG:cbu:CBU_0540 PATRIC:17929777 HOGENOM:HOG000036391 OMA:WARISKL
ProtClustDB:CLSK914134 BioCyc:CBUR227377:GJ7S-543-MONOMER
Uniprot:Q81ZL2
Length = 1169
Score = 182 (69.1 bits), Expect = 2.3e-17, Sum P(3) = 2.3e-17
Identities = 79/351 (22%), Positives = 162/351 (46%)
Query: 648 RLIE--DEAAKLQKEREEI-INIVQIEKRKRREMENHINLRKRKLESI-EKEDDINTALA 703
+LIE ++A + +KE +E+ I + E + + + +R+L+ + E+ + ++ L+
Sbjct: 788 QLIELREKAHQKRKEADELEIRLASNEDQLSL-LRQTVARDQRQLKQLTERREMLSQYLS 846
Query: 704 KLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEK 763
+ +LN ++ + +E + L++E + EK + E + +R LE +K
Sbjct: 847 EGDKPLEELN-EKLQTQLE-QRLILET---ELREVEKELE--EANQLLRHLEEKRVSTQK 899
Query: 764 LALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMP--TTIEELEAAI 821
+A E+ + + + + K Q F +LE+ E+P TIE + +
Sbjct: 900 ALNEAQAQLEELRMQRQTVSVRQTTIKEQLSENDF---DLEQVMAELPEEATIESWQEKL 956
Query: 822 QDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAE-IDALKEKWLPT 880
+ + + +N ++EYE + L KQ AD E L I + +
Sbjct: 957 DQLVERIQRMGPINLAAIEEYESVNERKNYLD-KQHADLTEALEILKNAIHKIDRETRAK 1015
Query: 881 LRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVLSAHHQS 940
+ Q+N+ F F + G +L+ ++D G++++ + G+ V + H S
Sbjct: 1016 FQETYDQVNQQFQSLFPRIFGGGRATLEMTDTDLLTAGVIVRAQ--PPGKRNV-TIHMLS 1072
Query: 941 GGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQ 991
GGE++++ + + SL L PF ++DE++ +D IN + F QLV+ S+
Sbjct: 1073 GGEKALTAVALVFSLFQLNPAPFCILDEVDAPLDDINVGR-FCQLVKEMSK 1122
Score = 120 (47.3 bits), Expect = 2.3e-17, Sum P(3) = 2.3e-17
Identities = 56/246 (22%), Positives = 102/246 (41%)
Query: 26 IELHNFMTF-DHLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSIGAYV 84
I+L F +F D + +N ++GPNG GKS++V A+ +G + R S+ +
Sbjct: 6 IKLAGFKSFVDPTLIPIRGSMNAIVGPNGCGKSNVVDAVRWVIGETSAKQLRGQSMSDVI 65
Query: 85 KRGEES----GYIKISLRGDTKE-----EH-----LTIMRKIDTRNKSEWFFNGKVVPKG 130
G S G I L D E E+ + I R+++ +S +F NG V +
Sbjct: 66 FNGTTSRKPVGKASIELHFDNSEGRIGGEYAKYGEIAIRREVERDGQSNYFINGAHVRRR 125
Query: 131 EVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKS 190
+V+++ + + + Q + + P +L E+A G + + E
Sbjct: 126 DVVDVFLGTGLGPRSYA-IVEQGMISNLIEAKPEELRVYIEEAAGISKYKERRR---ETE 181
Query: 191 SKLKTIECTVKRNGDTLNQL-KALN--VEQEKDVERVRQRAELLEKVESMKKKLPWLKYD 247
S+++ + + R D +L K L Q ER + + + + K L W D
Sbjct: 182 SRMRHTQENLDRVNDIAEELAKQLRHLKRQANAAERYKAYKQEERALGAQFKVLQWKALD 241
Query: 248 MKKAEY 253
K +E+
Sbjct: 242 HKLSEH 247
Score = 107 (42.7 bits), Expect = 7.1e-09, Sum P(2) = 7.1e-09
Identities = 55/248 (22%), Positives = 110/248 (44%)
Query: 644 QTEQRLIEDEAAKLQKEREEIINIVQ----IEKRKRREMENHINLRKRKLESIEKEDDIN 699
Q+EQ IE E ++K RE++ ++ + ++KR + L +R ++ EK
Sbjct: 262 QSEQHRIETE---IEKMREQLTDVNEKHNAVQKRYYGLGADIARLEQRIKDTQEKIHQWQ 318
Query: 700 TALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLK 759
+ L + + +L + +I L E+ K ++ H A+ E ++ + E N+
Sbjct: 319 SELEENENVWEELQNNTAECEAQITELETELEHLKPRSSDIHSAAAEASKELAQAESNMA 378
Query: 760 QHEKL--ALQASLHYEDCKKEV-----EHCRKHLSDAKRQAESIAFITPELE-----KEF 807
+ ++ A QA + EV EHC + L+D ++ + + +L+ E
Sbjct: 379 RWQEAWEAFQAETSQTMSQLEVMRTKREHCERQLTDLEKSKQQLQQNLKQLQLDQLLNEI 438
Query: 808 LEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFL 867
+ + E L A + D+ S+ S L + I + Q E+L T Q + + L+
Sbjct: 439 APLSSQSELLNAELSDSQSKLQS---LAETIASRRDANQTTREELQT-QRRELQALEARA 494
Query: 868 AEIDALKE 875
A ++AL++
Sbjct: 495 ASLEALQK 502
Score = 92 (37.4 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 48/234 (20%), Positives = 99/234 (42%)
Query: 674 KRREMENHINLRKRKLESIEKEDD-INTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVS 732
K E + IN + + E + E I T + K+ +Q D+N + L +I
Sbjct: 243 KLSEHDQAINQKNTRREEKQSEQHRIETEIEKMREQLTDVNEKHNAVQKRYYGLGADIAR 302
Query: 733 CKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQ 792
E+ + + KI + + L+++E + + + +C+ ++ L K +
Sbjct: 303 L-----EQRIKDTQ--EKIHQWQSELEENENVWEELQNNTAECEAQITELETELEHLKPR 355
Query: 793 AESIAFITPELEKEFLEMPTTI---EELEAAIQDNISQANSIFFLNQNILQEYEHRQRQI 849
+ I E KE + + + +E A Q SQ S + + + EH +RQ+
Sbjct: 356 SSDIHSAAAEASKELAQAESNMARWQEAWEAFQAETSQTMSQLEVMRT---KREHCERQL 412
Query: 850 EDLSTKQEADKKELKRFLAEIDALKEKWLPTLRN---LVAQINETFSRNFQEMA 900
DL ++ ++ LK+ ++D L + P L A+++++ S+ Q +A
Sbjct: 413 TDLEKSKQQLQQNLKQL--QLDQLLNEIAPLSSQSELLNAELSDSQSK-LQSLA 463
Score = 89 (36.4 bits), Expect = 1.1e-07, Sum P(3) = 1.1e-07
Identities = 48/257 (18%), Positives = 107/257 (41%)
Query: 650 IEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQA 709
++D L REE+I + + E+ + ++++ + +E N L+ Q
Sbjct: 764 LDDSQGLLATRREEMIRERDHYRTQLIELREKAHQKRKEADELEIRLASNEDQLSLLRQT 823
Query: 710 ADLNIQQFKYAIEIKNLLVEIVS--CK--WSYAEKHMASIE----FDAKIRELEFNLKQH 761
+ +Q K E + +L + +S K EK +E + ++RE+E L++
Sbjct: 824 VARDQRQLKQLTERREMLSQYLSEGDKPLEELNEKLQTQLEQRLILETELREVEKELEEA 883
Query: 762 EKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAI 821
+L +K + + L + + Q ++++ ++++ E +E++ A +
Sbjct: 884 NQLLRHLEEKRVSTQKALNEAQAQLEELRMQRQTVSVRQTTIKEQLSENDFDLEQVMAEL 943
Query: 822 QDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTL 881
+ + + L+Q L E R I + ++ E K +L + A + L L
Sbjct: 944 PEEATIESWQEKLDQ--LVERIQRMGPINLAAIEEYESVNERKNYLDKQHADLTEALEIL 1001
Query: 882 RNLVAQINETFSRNFQE 898
+N + +I+ FQE
Sbjct: 1002 KNAIHKIDRETRAKFQE 1018
Score = 85 (35.0 bits), Expect = 2.7e-07, Sum P(3) = 2.7e-07
Identities = 56/303 (18%), Positives = 134/303 (44%)
Query: 651 EDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAA 710
E + +L+ +R+ ++ Q + +++ ++ ++ +L++ +++ T L K+
Sbjct: 688 EQQLNQLETDRDTLLQTYQKLNAEATTVQSALSTKQAQLDNAQQQQ---TRL-KIGLNEC 743
Query: 711 DLNIQQFKYAIE-IKNLLVEIVSCKWSYAEKHMASI-EFDA-KIRELEFNLKQHEKL--A 765
+ I+Q + + IKN + + A + I E D + + +E K H+K A
Sbjct: 744 EQQIEQCQQQLTLIKNKASSLDDSQGLLATRREEMIRERDHYRTQLIELREKAHQKRKEA 803
Query: 766 LQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNI 825
+ + + ++ R+ ++ +RQ + + L + E +EEL +Q +
Sbjct: 804 DELEIRLASNEDQLSLLRQTVARDQRQLKQLTERREMLSQYLSEGDKPLEELNEKLQTQL 863
Query: 826 SQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALK-EKWLPTLRNL 884
Q + + + +E E + + L K+ + +K L A+++ L+ ++ ++R
Sbjct: 864 EQRLILETELREVEKELEEANQLLRHLEEKRVSTQKALNEAQAQLEELRMQRQTVSVRQT 923
Query: 885 VAQINETFSRN-FQEMAVAGEVSLDEH-ESDFDKFGILIKVKFRQSGQLEVLSAH-HQSG 941
I E S N F V E+ + ES +K L++ + ++ G + + + ++S
Sbjct: 924 T--IKEQLSENDFDLEQVMAELPEEATIESWQEKLDQLVE-RIQRMGPINLAAIEEYESV 980
Query: 942 GER 944
ER
Sbjct: 981 NER 983
Score = 78 (32.5 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 43/216 (19%), Positives = 88/216 (40%)
Query: 678 MENHINLRKRKLESIEKEDDINTAL-AKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWS 736
+E I + K+ + E + N + +L + A+ Q + E+++L +
Sbjct: 303 LEQRIKDTQEKIHQWQSELEENENVWEELQNNTAECEAQITELETELEHLKPRSSDIHSA 362
Query: 737 YAE--KHMASIEFDAKIRELEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAE 794
AE K +A E + + + Q E + L K+E HC + L+D ++ +
Sbjct: 363 AAEASKELAQAESNMARWQEAWEAFQAETSQTMSQLEVMRTKRE--HCERQLTDLEKSKQ 420
Query: 795 SIAFITPELE-----KEFLEMPTTIEELEAAIQDNISQANSIFFL-------NQNILQEY 842
+ +L+ E + + E L A + D+ S+ S+ NQ +E
Sbjct: 421 QLQQNLKQLQLDQLLNEIAPLSSQSELLNAELSDSQSKLQSLAETIASRRDANQTTREEL 480
Query: 843 EHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWL 878
+ ++R+++ L + + + K L E D +WL
Sbjct: 481 QTQRRELQALEARAASLEALQKAALGESDGKISEWL 516
Score = 67 (28.6 bits), Expect = 1.6e-05, Sum P(3) = 1.6e-05
Identities = 20/77 (25%), Positives = 41/77 (53%)
Query: 644 QTEQRLI-EDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKE-DDINTA 701
Q EQRLI E E +++KE EE +++ + KR + +N + +LE + + ++
Sbjct: 862 QLEQRLILETELREVEKELEEANQLLRHLEEKRVSTQKALNEAQAQLEELRMQRQTVSVR 921
Query: 702 LAKLVDQAA--DLNIQQ 716
+ +Q + D +++Q
Sbjct: 922 QTTIKEQLSENDFDLEQ 938
Score = 54 (24.1 bits), Expect = 2.3e-17, Sum P(3) = 2.3e-17
Identities = 11/48 (22%), Positives = 26/48 (54%)
Query: 385 NQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAE 432
NQK ++ EK+ ++ + + + ++L D+ +K+N + GA+
Sbjct: 252 NQKNTRREEKQSEQHRIETEIEKMREQLTDVNEKHNAVQKRYYGLGAD 299
Score = 52 (23.4 bits), Expect = 2.6e-05, Sum P(3) = 2.6e-05
Identities = 19/55 (34%), Positives = 32/55 (58%)
Query: 375 SQILELGVQANQKRLQKSEKEKIL--NQNKLTL-RQCSDR----LKDMEDKNNKL 422
+Q++EL +A+QKR + E E L N+++L+L RQ R LK + ++ L
Sbjct: 787 TQLIELREKAHQKRKEADELEIRLASNEDQLSLLRQTVARDQRQLKQLTERREML 841
Score = 49 (22.3 bits), Expect = 2.4e-09, Sum P(3) = 2.4e-09
Identities = 19/85 (22%), Positives = 37/85 (43%)
Query: 169 ETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRA 228
ETE P+ H A E S +L E + R + +A + +E +R +
Sbjct: 346 ETELEHLKPRSSDIHSAAAEASKELAQAESNMARWQEAWEAFQAETSQTMSQLEVMRTKR 405
Query: 229 ELLEK-VESMKKKLPWLKYDMKKAE 252
E E+ + ++K L+ ++K+ +
Sbjct: 406 EHCERQLTDLEKSKQQLQQNLKQLQ 430
Score = 46 (21.3 bits), Expect = 1.5e-16, Sum P(3) = 1.5e-16
Identities = 19/99 (19%), Positives = 46/99 (46%)
Query: 371 EKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSG 430
+KL ++ + + K+ Q ++ + K+ L +C +++ + + L ++N
Sbjct: 706 QKLNAEATTVQSALSTKQAQLDNAQQQQTRLKIGLNECEQQIEQCQQQ----LTLIKNK- 760
Query: 431 AENIFEAYCWLQQHRHELNKEA--YGPVLLEVNVSNRAH 467
A ++ ++ L R E+ +E Y L+E+ +AH
Sbjct: 761 ASSLDDSQGLLATRREEMIRERDHYRTQLIELR--EKAH 797
Score = 45 (20.9 bits), Expect = 6.1e-09, Sum P(3) = 6.1e-09
Identities = 14/59 (23%), Positives = 30/59 (50%)
Query: 178 QLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVE-QEKDVERVRQRAELLEKVE 235
Q + + L + SKL+++ T+ D NQ ++ Q ++++ + RA LE ++
Sbjct: 444 QSELLNAELSDSQSKLQSLAETIASRRDA-NQTTREELQTQRRELQALEARAASLEALQ 501
Score = 44 (20.5 bits), Expect = 2.4e-16, Sum P(3) = 2.4e-16
Identities = 19/69 (27%), Positives = 37/69 (53%)
Query: 358 QTVPAYEPPHDKIEKLGSQILELGVQANQKRLQKSEKEKILNQ--NKLT-LRQCSDRLK- 413
QT+ E K E Q+ +L + ++++LQ++ K+ L+Q N++ L S+ L
Sbjct: 393 QTMSQLEVMRTKREHCERQLTDL--EKSKQQLQQNLKQLQLDQLLNEIAPLSSQSELLNA 450
Query: 414 DMEDKNNKL 422
++ D +KL
Sbjct: 451 ELSDSQSKL 459
Score = 41 (19.5 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 29/104 (27%), Positives = 45/104 (43%)
Query: 367 HDKIEKLGSQILELGVQANQKRLQKSEK--EKILN-QNKLTLRQCSD-RLKDMEDKNNKL 422
+D E+L Q+ L QAN K+ K E+ L Q K+ + D +L + + N+
Sbjct: 195 NDIAEELAKQLRHLKRQANAAERYKAYKQEERALGAQFKVLQWKALDHKLSEHDQAINQ- 253
Query: 423 LHALRNSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRA 466
+N+ E E +QHR E E L +VN + A
Sbjct: 254 ----KNTRRE---EKQS--EQHRIETEIEKMREQLTDVNEKHNA 288
Score = 40 (19.1 bits), Expect = 6.1e-16, Sum P(3) = 6.1e-16
Identities = 14/64 (21%), Positives = 28/64 (43%)
Query: 391 KSEKEKILNQNKL--TLRQ-CSDRLKDMEDKNNKLLHALRNSGAENIFEAYCWLQQHRHE 447
++E + ++Q ++ T R+ C +L D+E +L L+ + + L
Sbjct: 388 QAETSQTMSQLEVMRTKREHCERQLTDLEKSKQQLQQNLKQLQLDQLLNEIAPLSSQSEL 447
Query: 448 LNKE 451
LN E
Sbjct: 448 LNAE 451
>UNIPROTKB|F1SRP0 [details] [associations]
symbol:SMC2 "Structural maintenance of chromosomes protein"
species:9823 "Sus scrofa" [GO:0005634 "nucleus" evidence=IEA]
[GO:0007076 "mitotic chromosome condensation" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000796
"condensin complex" evidence=IEA] InterPro:IPR024704
InterPro:IPR010935 InterPro:IPR027120 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0005634 GO:GO:0005694 GO:GO:0006281
GO:GO:0006310 GO:GO:0030261 GO:GO:0007062 SUPFAM:SSF75553
GeneTree:ENSGT00550000074857 PANTHER:PTHR18937:SF9 OMA:CQNGKIP
EMBL:CU861938 Ensembl:ENSSSCT00000005946 Uniprot:F1SRP0
Length = 1191
Score = 167 (63.8 bits), Expect = 3.6e-17, Sum P(4) = 3.6e-17
Identities = 77/344 (22%), Positives = 147/344 (42%)
Query: 652 DEAAKLQKE--REEIINI-VQIE--KRKRREMENHINLRKRKLESIEKEDDINTALAKLV 706
D ++K K R+E+ I +++E KR+ E + ++S E + I A++
Sbjct: 805 DASSKKMKRNSRKEVEAITLELEELKREHASCEQQLEAVNEAIKSYEGQ--IAVVAAEVA 862
Query: 707 DQAADLNIQQFKYAIEIKNLLVE--IVSCKWSYAEKHMA-SIEFDAKIRELEFNLKQHEK 763
+N Q + + + + + IV K++ KH + E+ KI+EL+ N+ +H++
Sbjct: 863 KNKESVNKAQEEVTKQKEVITAQDNIVKAKYAEVAKHKEQNNEYQLKIKELDHNINKHKR 922
Query: 764 LALQASLHYEDCKKEVE--HCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAI 821
A A+ K+ + + KHL A P KE + +EE++ +
Sbjct: 923 EAEDAAAKVSKMLKDYDWINTDKHLFGQPNTAYDFKTTNP---KEASQRLQKLEEMKEKL 979
Query: 822 QDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTL 881
N++ N+L E E R DL K+ + + + LA I+ L +K L
Sbjct: 980 GRNVNMRA------MNVLTEAEERYN---DLMKKKRIVENDKSKILATIEDLDQKKNQAL 1030
Query: 882 RNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVLSAHHQSG 941
++N+ F F + L E G+ KV + + E L+ SG
Sbjct: 1031 NIAWQKVNKDFGSIFSTLLPGANAMLAPPEGQTVLDGLEFKVALGNTWK-ENLT--ELSG 1087
Query: 942 GERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQL 985
G+RS+ + ++S+ P ++DE++ +D + + + Q L
Sbjct: 1088 GQRSLVALSLILSMLLFKPAPIYILDEVDAALDLSHTQNIGQML 1131
Score = 122 (48.0 bits), Expect = 3.6e-17, Sum P(4) = 3.6e-17
Identities = 43/184 (23%), Positives = 84/184 (45%)
Query: 46 NLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSIGAYVKRGEESGYIKISL-----RGD 100
N + G NGSGKS+++ +I LG RA+++ V + ++G K S+ D
Sbjct: 28 NAITGLNGSGKSNILDSICFLLGISNLSQVRASNLQDLVYKNGQAGITKASVSITFDNSD 87
Query: 101 TKE--------EHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQFLPQ 152
K+ + +T+ R++ ++++ NG V ++ + VNN + Q
Sbjct: 88 KKQSPLGFEVHDEITVTRQVVIGGRNKYLINGVNANNTRVQDLFCSVGLNVNNPHFLIMQ 147
Query: 153 DRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCA----LVEKSSKLKTIECTVKRN-GDTL 207
R+ + + P ++L E+A G + A + +K +KLK I+ ++ T+
Sbjct: 148 GRITKVLNMKPPEILSMIEEAAGTRMYEYKKIAAQKTIEKKEAKLKEIKTILEEEITPTI 207
Query: 208 NQLK 211
+LK
Sbjct: 208 QKLK 211
Score = 88 (36.0 bits), Expect = 7.0e-08, Sum P(3) = 7.0e-08
Identities = 45/212 (21%), Positives = 96/212 (45%)
Query: 676 REMENHINLRKRKLESIEKEDDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKW 735
+++++ + +++ +L+++E+E LA L + A +Q K E+K +++ K
Sbjct: 681 KDVQDELRIKENELQALEEE------LAHLKNTAE--KYRQLKQQWEMKTEEADLLQTKL 732
Query: 736 SYAEKHMASIEFDAK---IRELEFNLKQHEKLALQASLHYEDCKKEVEHCR----KHLSD 788
+ H E DA I E E LK +++ +A YE + ++++ + L D
Sbjct: 733 QQSSYHKQQEELDALKKIIEESEETLKNTKEIQKKAEEKYEVLENKMKNAEAERERELKD 792
Query: 789 AKRQAESIAFITPELEKEFL-----EMPTTIEELEAAIQDNISQANSIFFLNQNILQEYE 843
A+R+ +S K+ E+ ELE +++ S + +N+ I + YE
Sbjct: 793 AQRKLDSAKTKADASSKKMKRNSRKEVEAITLELEELKREHASCEQQLEAVNEAI-KSYE 851
Query: 844 HRQRQIEDLSTKQEADKKELKRFLAEIDALKE 875
QI ++ + +K+ + + E+ KE
Sbjct: 852 G---QIAVVAAEVAKNKESVNKAQEEVTKQKE 880
Score = 81 (33.6 bits), Expect = 3.5e-07, Sum P(3) = 3.5e-07
Identities = 48/244 (19%), Positives = 113/244 (46%)
Query: 643 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREME---NHINLRKRKLE--SIEKEDD 697
+Q E R+ E+E L++E + N + ++ +++ E +L + KL+ S K+ +
Sbjct: 683 VQDELRIKENELQALEEELAHLKNTAEKYRQLKQQWEMKTEEADLLQTKLQQSSYHKQQE 742
Query: 698 INTALAKLVDQAADL--NIQQFKYAIEIKNLLVEIVSCKWSYAEKHM----ASIEFDAKI 751
AL K+++++ + N ++ + E K ++E K + AE+ A + D+
Sbjct: 743 ELDALKKIIEESEETLKNTKEIQKKAEEKYEVLEN-KMKNAEAERERELKDAQRKLDSAK 801
Query: 752 RELEFN---LKQHEKLALQA-SLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEF 807
+ + + +K++ + ++A +L E+ K+E C + L E+I ++
Sbjct: 802 TKADASSKKMKRNSRKEVEAITLELEELKREHASCEQQLEAVN---EAIKSYEGQIAVVA 858
Query: 808 LEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFL 867
E+ E + A Q+ +++ + NI+ + + E K++ ++ +LK +
Sbjct: 859 AEVAKNKESVNKA-QEEVTKQKEVITAQDNIV-----KAKYAEVAKHKEQNNEYQLK--I 910
Query: 868 AEID 871
E+D
Sbjct: 911 KELD 914
Score = 70 (29.7 bits), Expect = 5.1e-06, Sum P(5) = 5.1e-06
Identities = 49/211 (23%), Positives = 91/211 (43%)
Query: 708 QAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDA-KIREL--EFNLKQHEKL 764
QAA + + +F+ ++++ L I + E+ +A ++ A K R+L ++ +K E
Sbjct: 669 QAASI-LTKFQELKDVQDEL-RIKENELQALEEELAHLKNTAEKYRQLKQQWEMKTEEAD 726
Query: 765 ALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDN 824
LQ L K+ E L ++E T E++K+ EE +++
Sbjct: 727 LLQTKLQQSSYHKQQEELDA-LKKIIEESEETLKNTKEIQKK-------AEEKYEVLENK 778
Query: 825 ISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKR--------FLAEIDALKEK 876
+ A + +E + QR+++ TK +A K++KR E++ LK +
Sbjct: 779 MKNAEA------ERERELKDAQRKLDSAKTKADASSKKMKRNSRKEVEAITLELEELKRE 832
Query: 877 WLPTLRNLVAQINETF-SRNFQEMAVAGEVS 906
+ L A +NE S Q VA EV+
Sbjct: 833 HASCEQQLEA-VNEAIKSYEGQIAVVAAEVA 862
Score = 61 (26.5 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 57/263 (21%), Positives = 112/263 (42%)
Query: 649 LIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTA--LAKLV 706
L ED + +E +E+ + + + + E + I ++E +EK D T L L
Sbjct: 241 LAEDTKERSAEELKEMQDKILKLQEELSENDKKIKALSHEIEELEKRKDKETGGILRSLE 300
Query: 707 DQAAD---LNIQ-QFKYAIEIKNLLVEIVSCKWSYAEKHMA--SIEFDAKIREL------ 754
D A+ +N + Q + ++ KNL E K EK+M S AK +E+
Sbjct: 301 DALAEAQRINTKSQSAFDLKKKNLASE--ENKRKELEKNMVEDSKTLAAKEKEVKKITDG 358
Query: 755 -----EFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLE 809
E + K E LA A H+ + + ++A + +A ++ K E
Sbjct: 359 LNALQEASNKDAEALAA-AQQHFNAVSAGLSS-NEDGAEATLAGQMMA-CKNDISKAQTE 415
Query: 810 MPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAE 869
+L+ A Q+ ++ + ++ ++ E + ++ L K EA+ K+L +
Sbjct: 416 AKQAQMKLKHAQQELKTKQTEVKKMDSGYRKDQEALEA-VKKLKEKLEAEMKKLNYEENK 474
Query: 870 IDALKEKWLPTLRNLVAQINETF 892
++L EK R+ ++++ ET+
Sbjct: 475 EESLLEKRRQLSRD-ISRLKETY 496
Score = 58 (25.5 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 28/119 (23%), Positives = 52/119 (43%)
Query: 804 EKEFLEMPTTIEE-LEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKE 862
E + E+ T +EE + IQ + + S + Q +++E EH D KE
Sbjct: 189 EAKLKEIKTILEEEITPTIQ-KLKEERSSYLEYQKVMREIEHLSHLYIAYQFLLAEDTKE 247
Query: 863 LKRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEM-AVAGEVSLDEHESDFDKFGIL 920
R E+ +++K + ++ E S N +++ A++ E+ E D + GIL
Sbjct: 248 --RSAEELKEMQDK--------ILKLQEELSENDKKIKALSHEIEELEKRKDKETGGIL 296
Score = 56 (24.8 bits), Expect = 3.6e-17, Sum P(4) = 3.6e-17
Identities = 25/111 (22%), Positives = 53/111 (47%)
Query: 362 AYEPPHDKIEKLGSQILELGVQA--NQKRLQKSEKEKI-LNQNKLTLRQCSDRLKDMEDK 418
+Y ++++ L +I+E + N K +QK +EK + +NK+ + ++R ++++D
Sbjct: 736 SYHKQQEELDAL-KKIIEESEETLKNTKEIQKKAEEKYEVLENKMKNAE-AERERELKDA 793
Query: 419 NNKLLHALRNSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHAN 469
KL A + A + ++ + KE + LE+ R HA+
Sbjct: 794 QRKLDSAKTKADASS--------KKMKRNSRKEVEA-ITLELEELKREHAS 835
Score = 55 (24.4 bits), Expect = 3.6e-17, Sum P(4) = 3.6e-17
Identities = 16/45 (35%), Positives = 24/45 (53%)
Query: 209 QLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAEY 253
+LK E +K R+ E LE V+ +K+KL + +MKK Y
Sbjct: 429 ELKTKQTEVKKMDSGYRKDQEALEAVKKLKEKL---EAEMKKLNY 470
Score = 55 (24.4 bits), Expect = 4.5e-17, Sum P(4) = 4.5e-17
Identities = 15/61 (24%), Positives = 33/61 (54%)
Query: 375 SQILELGVQANQKRLQKSEKE---KILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGA 431
+ +L+ +Q + Q+ E + KI+ +++ TL+ + K E+K L + ++N+ A
Sbjct: 725 ADLLQTKLQQSSYHKQQEELDALKKIIEESEETLKNTKEIQKKAEEKYEVLENKMKNAEA 784
Query: 432 E 432
E
Sbjct: 785 E 785
Score = 53 (23.7 bits), Expect = 5.1e-06, Sum P(5) = 5.1e-06
Identities = 13/64 (20%), Positives = 38/64 (59%)
Query: 643 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESI-EKEDDINTA 701
++T+Q ++ + +K++E + + +++++ EM+ +N + K ES+ EK ++
Sbjct: 430 LKTKQTEVKKMDSGYRKDQEALEAVKKLKEKLEAEMKK-LNYEENKEESLLEKRRQLSRD 488
Query: 702 LAKL 705
+++L
Sbjct: 489 ISRL 492
Score = 49 (22.3 bits), Expect = 6.9e-10, Sum P(4) = 6.9e-10
Identities = 35/135 (25%), Positives = 56/135 (41%)
Query: 97 LRGDTKE---EHLTIMRKIDTRNKSEWFFNGKVVP--KGEVLEITKRFNIQVNNLTQFLP 151
L DTKE E L M+ + + E N K + E+ E+ KR + + + + L
Sbjct: 241 LAEDTKERSAEELKEMQDKILKLQEELSENDKKIKALSHEIEELEKRKDKETGGILRSL- 299
Query: 152 QDRVCEFAKLSPVKL----LEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTL 207
+D + E +++ L++ A + + +VE S L E VK+ D L
Sbjct: 300 EDALAEAQRINTKSQSAFDLKKKNLASEENKRKELEKNMVEDSKTLAAKEKEVKKITDGL 359
Query: 208 NQLKALNVEQEKDVE 222
N AL KD E
Sbjct: 360 N---ALQEASNKDAE 371
Score = 47 (21.6 bits), Expect = 3.1e-15, Sum P(3) = 3.1e-15
Identities = 15/54 (27%), Positives = 29/54 (53%)
Query: 386 QKRLQKS--EKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAENIFEA 437
+K L+K+ E K L + +++ +D L +++ +NK AL + A+ F A
Sbjct: 331 RKELEKNMVEDSKTLAAKEKEVKKITDGLNALQEASNKDAEAL--AAAQQHFNA 382
Score = 46 (21.3 bits), Expect = 1.5e-14, Sum P(4) = 1.5e-14
Identities = 14/53 (26%), Positives = 27/53 (50%)
Query: 496 KNLKPFDVPILNYVSNESSRKE-PFQISEEMRALGISAR-LDQVFDAPHAVKE 546
K+ FD+ N S E+ RKE + E+ + L + + ++ D +A++E
Sbjct: 312 KSQSAFDLKKKNLASEENKRKELEKNMVEDSKTLAAKEKEVKKITDGLNALQE 364
Score = 42 (19.8 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 13/75 (17%), Positives = 32/75 (42%)
Query: 178 QLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESM 237
Q +Q + ++ +L ++ ++ + +TL K + + E+ E + + + E
Sbjct: 729 QTKLQQSSYHKQQEELDALKKIIEESEETLKNTKEIQKKAEEKYEVLENKMKNAEAERER 788
Query: 238 KKKLPWLKYDMKKAE 252
+ K K D K +
Sbjct: 789 ELKDAQRKLDSAKTK 803
Score = 41 (19.5 bits), Expect = 5.0e-07, Sum P(2) = 5.0e-07
Identities = 16/66 (24%), Positives = 31/66 (46%)
Query: 186 LVEKSSK-LKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWL 244
++E+S + LK + K+ + L+ N + + ER R+ + K++S K K
Sbjct: 750 IIEESEETLKNTKEIQKKAEEKYEVLE--NKMKNAEAERERELKDAQRKLDSAKTKADAS 807
Query: 245 KYDMKK 250
MK+
Sbjct: 808 SKKMKR 813
Score = 39 (18.8 bits), Expect = 1.5e-14, Sum P(4) = 1.5e-14
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 404 TLRQCSDRLKDMEDKNNKLLHAL 426
T + ++ LK+M+DK KL L
Sbjct: 245 TKERSAEELKEMQDKILKLQEEL 267
Score = 39 (18.8 bits), Expect = 9.4e-07, Sum P(3) = 9.4e-07
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 426 LRNSGAENIFEAYCWL 441
L SG NI ++ C+L
Sbjct: 33 LNGSGKSNILDSICFL 48
>DICTYBASE|DDB_G0288993 [details] [associations]
symbol:smc6 "AAA ATPase domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0030915 "Smc5-Smc6
complex" evidence=IEA;ISS] [GO:0006281 "DNA repair"
evidence=IEA;ISS] [GO:0000724 "double-strand break repair via
homologous recombination" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=IEA;ISS] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0005694 "chromosome" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR027132 InterPro:IPR003395 dictyBase:DDB_G0288993
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0006281
GenomeReviews:CM000154_GR GO:GO:0006310 EMBL:AAFI02000129
GO:GO:0046982 eggNOG:COG1196 GO:GO:0030915 HSSP:P32908
RefSeq:XP_636454.1 ProteinModelPortal:Q54I56
EnsemblProtists:DDB0231143 GeneID:8626906 KEGG:ddi:DDB_G0288993
OMA:ISANIFT ProtClustDB:CLSZ2730382 PANTHER:PTHR19306:SF2
Uniprot:Q54I56
Length = 1185
Score = 247 (92.0 bits), Expect = 8.2e-17, P = 8.2e-17
Identities = 185/945 (19%), Positives = 381/945 (40%)
Query: 122 FNGKVVPK--GEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLS-PVKLLEETEKAVGDPQ 178
+NGK V +V I ++FNIQ++N L QD +F + P + A +
Sbjct: 259 YNGKTVSDKFNDVSLILEQFNIQIDNPMSILTQDTSRQFLNSAGPQDKYKSFLMATQLDK 318
Query: 179 LPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMK 238
+ + + E K+K + + + + +L+ E K+ + ++Q L K+ K
Sbjct: 319 MTKDYTTIREHIDKIKDM---LSQKVVVIQELEKKVREYNKEYKDLQQMVGLERKISEFK 375
Query: 239 KKLPWL-----KYDMKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEG-KKQEKAILD 292
+L W + + K+ E T+ ++K IE KK K D
Sbjct: 376 NQLAWSFVVESEREAKRKEKQVAEAEERSFDNDIRKVDETIETYNKSIEDIKKDIKEFTD 435
Query: 293 GDCKKLSSLINENSKRRMDFLEKVDQGVQVQGKYKXXXXXXXXXXXXXXXILKARXXXXX 352
K+ E + R + +E+ + +Q Q + L+ +
Sbjct: 436 QI--KIQEQKKETNNREILTIEREEAKIQTQIEANNKKRQQRKQRRH----LQLQSINEI 489
Query: 353 XXXXXQTVPAYEPPHDKIEKLGSQILELGVQANQKRLQKSE----KEKIL--NQNKLTLR 406
Q + + D+I+K G Q L+L + + +K + +E + +QN+ T+
Sbjct: 490 KERNAQ-LANNQSKLDEIKKKGQQKLQLEARKEELIKEKEDLMRDRENLKRDHQNQRTIT 548
Query: 407 QCSDR-LKDMEDKNNKLLHALRNSG---AENIFEAYCWLQQHRHELNKEAYGPVLLEVNV 462
Q +R + + + N L + + + + ++ R +K GP+ L + +
Sbjct: 549 QQMNREYEGLRVQLNNLRSTQKGENQAYGKGMTDFLHKIEASRRNFSKLPIGPIGLSLKI 608
Query: 463 SNRAHANYLEDHVGHYIWKSFITQDAGDRDFLAKNLKPFDVPILNYVSNESSRKEPFQIS 522
N + A +E + ++F+ D L K F + + +Y + E ++
Sbjct: 609 KNESWAFAIESAISKATLRNFLVFSIPDGITLQKLGHQFGIKV-DYTKIPETT-EVYKTV 666
Query: 523 EEMRALGISARLDQVFDAP-HAVKEVLISQFGLDSSYIGS--KETDQK--ADNVAKLGIL 577
E A + +V D+P H + LI ++ +G+ KE D D + G+
Sbjct: 667 EHDELDPSLATVLRVLDSPSHFIINFLIDTKKVEQIGLGNDRKEIDSVLYTDRCPR-GLS 725
Query: 578 DFWTPENHYRWSISRYGGHVSASVEPVNQSRLLLCSVDG---NXXXXXXXXXXXXXXXXX 634
F+ P+ + +S ++ G + + ++ +L + D
Sbjct: 726 QFFDPQGN-NYSKTKSGNPFYQAAKNSGEATMLRVNSDAAIQRTQRDMESKLPALNQQKK 784
Query: 635 XXXXXXXXMQT-EQRLIEDEAAKLQKERE--EIIN-IVQIEKRKRREMENHINLRKRKLE 690
+Q E ++ +++ + Q R+ +I N I IE ++ +++ L + L
Sbjct: 785 IEQELSSDVQAIEHKISQNDQDQNQCSRKILQITNEIKSIEDTLVQQTDDYSEL-EIGLA 843
Query: 691 SIEKE-----DDINTALAKLVDQAADLNIQQFKYAIEIKNL--LVEIVSCKWSYAEKHMA 743
S+++E ++IN A+ + AA Q+ +A + L ++++S + E ++
Sbjct: 844 SLDEEIKSMDEEINIQKAQRTEVAA----QKGPFAENNRALDDQIDVLSNQLGNIENNLR 899
Query: 744 SIEFDAKIRELEFN----LKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFI 799
+F+ +R+L N L+Q + A + + ++ +E ++ A + E I
Sbjct: 900 --KFNEGLRKLNNNKQALLQQQGRSAQERDQFKAEYQRILEIVKEKTDKATQICERIEIP 957
Query: 800 TPE----LEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTK 855
T E L + ++ +E+ E+ + + ++A +F N L+E ++ IE+L+T
Sbjct: 958 TNETNTTLTNKIIQYTKQLEK-ESRGKRSRTEALKLFQDANNSLKEISEQRDNIEELATI 1016
Query: 856 QEADKKELKRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFD 915
E + E R+ +KW ++ + ++ F+ + G ++ D D
Sbjct: 1017 LERNLNE--RY--------KKWQRFRLSISRRSDQYFNIFLSKKGYTGSLTFDHQNGKLD 1066
Query: 916 KFGILIK-VKFRQSGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMD 974
L K + Q+G + SGGERS ST+ L++ + CPFR +DE + MD
Sbjct: 1067 INVELQKALPSNQNGTAKG-DTKGLSGGERSFSTVSLLLAFWENMECPFRAMDEFDVFMD 1125
Query: 975 PINERKMFQQLVRAASQPNTPQCFLLTPKLLPDLEYSEACSILNI 1019
+N L+ A + + Q +TP L ++ SE + +
Sbjct: 1126 EVNRSISINLLMSKAEENRSKQYIFVTPLALNHIKTSEYVKVFRV 1170
Score = 180 (68.4 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 78/338 (23%), Positives = 138/338 (40%)
Query: 5 RVKRLKVSRGEDDYMPGNIIEIELHNFMTFDHLICKPGSRLNLVIGPNGSGKSSLVCAIA 64
R ++LK E + G I I L NFM H S +N + G NGSGKS+++ A+
Sbjct: 133 REQQLKSGVTEPE--AGIIESITLENFMCHRHFKLDFCSNVNFIAGENGSGKSAVLIALI 190
Query: 65 LALGGDTQLLGRATSIGAYVKRGEESGYIKISLRGDTKE--------EHLTIMRKIDTRN 116
+ LG R + + VK + I + LR +E + + I R+I
Sbjct: 191 VCLGAKAGFTNRGSKLSDLVKAETNTAVITVKLRNQGQEAFKPEKYGKSVIIERRISRTG 250
Query: 117 KSEWF---FNGKVVPK--GEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLS-PVKLLEET 170
S + +NGK V +V I ++FNIQ++N L QD +F + P +
Sbjct: 251 SSGYKVKDYNGKTVSDKFNDVSLILEQFNIQIDNPMSILTQDTSRQFLNSAGPQDKYKSF 310
Query: 171 EKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAEL 230
A ++ + + E K+K + + + + +L+ E K+ + ++Q L
Sbjct: 311 LMATQLDKMTKDYTTIREHIDKIKDM---LSQKVVVIQELEKKVREYNKEYKDLQQMVGL 367
Query: 231 LEKVESMKKKLPWL-----KYDMKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKK 285
K+ K +L W + + K+ E T+ ++K IE K
Sbjct: 368 ERKISEFKNQLAWSFVVESEREAKRKEKQVAEAEERSFDNDIRKVDETIETYNKSIEDIK 427
Query: 286 QEKAILDGDCKKLSSLINENSKRRMDFLEKVDQGVQVQ 323
++ D K+ E + R + +E+ + +Q Q
Sbjct: 428 KDIKEFT-DQIKIQEQKKETNNREILTIEREEAKIQTQ 464
>TAIR|locus:2079107 [details] [associations]
symbol:ATSMC2 "AT3G47460" species:3702 "Arabidopsis
thaliana" [GO:0005215 "transporter activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0005694 "chromosome" evidence=IEA] [GO:0051276
"chromosome organization" evidence=IEA] [GO:0010267 "production of
ta-siRNAs involved in RNA interference" evidence=RCA] [GO:0035196
"production of miRNAs involved in gene silencing by miRNA"
evidence=RCA] [GO:0051607 "defense response to virus" evidence=RCA]
InterPro:IPR024704 InterPro:IPR010935 InterPro:IPR027120
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0007126
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005694 GO:GO:0051301
GO:GO:0007067 GO:GO:0006281 GO:GO:0005215 GO:GO:0006310
GO:GO:0030261 EMBL:AL096860 EMBL:AL132955 UniGene:At.35803
UniGene:At.71101 GO:GO:0007062 eggNOG:COG1196 SUPFAM:SSF75553
KO:K06674 PANTHER:PTHR18937:SF9 HSSP:P32908 HOGENOM:HOG000163792
ProtClustDB:CLSN2685173 IPI:IPI00530229 PIR:T45706
RefSeq:NP_190330.1 ProteinModelPortal:Q9SN90 SMR:Q9SN90
STRING:Q9SN90 PaxDb:Q9SN90 PRIDE:Q9SN90 EnsemblPlants:AT3G47460.1
GeneID:823900 KEGG:ath:AT3G47460 TAIR:At3g47460 InParanoid:Q9SN90
OMA:WIASERQ PhylomeDB:Q9SN90 Genevestigator:Q9SN90 Uniprot:Q9SN90
Length = 1171
Score = 148 (57.2 bits), Expect = 2.1e-16, Sum P(3) = 2.1e-16
Identities = 57/228 (25%), Positives = 104/228 (45%)
Query: 22 NIIEIELHNFMTFDHLICKPG--SRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATS 79
+I EI L F ++ PG N + G NGSGKS+++ +I LG RA +
Sbjct: 2 HIKEICLEGFKSYATRTVVPGFDPHFNAITGLNGSGKSNILDSICFVLGITNLQQVRAAN 61
Query: 80 IGAYVKRGEESGYIK--ISLRGDTKE---------EH--LTIMRKIDTRNKSEWFFNGKV 126
+ V + ++G + +S+ D E +H +T+ R+I K+++ NGK+
Sbjct: 62 LQELVYKQGQAGITRATVSVTFDNSERNRSPLGHEDHSEITVTRQIVVGGKNKYLINGKL 121
Query: 127 VPKGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCA- 185
+V + + VNN + Q R+ + + P+++L E+A G + A
Sbjct: 122 AQPNQVQNLFHSVQLNVNNPHFLIMQGRITKVLNMKPMEILSMLEEAAGTRMYENKKEAA 181
Query: 186 ---LVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAEL 230
L +K +K+ I +++ D L L+ L E+ + ++ AEL
Sbjct: 182 LKTLEKKQTKVDEINKLLEK--DILPALEKLRREKSQYMQWANGNAEL 227
Score = 147 (56.8 bits), Expect = 2.1e-16, Sum P(3) = 2.1e-16
Identities = 80/342 (23%), Positives = 154/342 (45%)
Query: 659 KEREEIINIVQIE-KRKRREMENHINLRKRKL---ESIEKEDD-INTALAKLVDQ----A 709
K+ E+ I ++ + ++++ H N+R+R + E++ +E + + L L Q A
Sbjct: 787 KDLEKNIKTLKARIQASSKDLKGHENVRERLVMEQEAVTQEQSYLKSQLTSLRTQISTLA 846
Query: 710 ADLNIQQFKY-AIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLAL-Q 767
+D+ Q+ K AI+ K+ + K +A+ + I E E L++ + L +
Sbjct: 847 SDVGNQRAKVDAIQ-KDHDQSLSELKLIHAKMKECDTQISGSIAEQEKCLQKISDMKLDR 905
Query: 768 ASLHYEDCKKEVEHCRKHLS-DAKRQAESIAFITPE----------LEKEFLEMPTTIEE 816
L E + E+EH K+ S + E +IT E + E + EE
Sbjct: 906 KKLENEVTRMEMEH--KNCSVKVDKLVEKHTWITSEKRLFGNGGTDYDFESRDPHKAREE 963
Query: 817 LEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQ---EADKKELKRFLAEIDAL 873
LE D S + N+ + +E + + L TK+ E DK ++K+ + E+D
Sbjct: 964 LERLQTDQSSLEKRV---NKKVTAMFEKAEDEYNALMTKKNIIETDKSKIKKVIEELDEK 1020
Query: 874 KEKWLPTLRNLVAQINETFSRNFQEMAVAGEVS-LDEHESDFDKFGILIKVKFRQSGQLE 932
K++ TL+ ++N+ F F + + G +S L+ E G+ ++V F G +
Sbjct: 1021 KKE---TLKVTWVKVNQDFGSIFSTL-LPGTMSKLEPPEGGTFLDGLEVRVAF---GDVW 1073
Query: 933 VLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMD 974
S SGG+RS+ + +++L P ++DE++ +D
Sbjct: 1074 KQSLSELSGGQRSLLALSLILALLLFKPAPIYILDEVDAALD 1115
Score = 88 (36.0 bits), Expect = 7.2e-10, Sum P(2) = 7.2e-10
Identities = 67/292 (22%), Positives = 130/292 (44%)
Query: 655 AKLQKEREEIINIVQIEKRKRREMENHI-NLRKRKLESIEKEDDINTA-LAKLVDQAADL 712
A+L + + + ++ K R+ H+ K K+ I+++ D +++L Q L
Sbjct: 225 AELDRLKRFCVAFEYVQAEKIRDNSIHVVEEMKIKMTGIDEQTDKTQGEISELEKQIKAL 284
Query: 713 N-IQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLH 771
++ E+K L ++ S + + E +K+ +E L+ EK A + +
Sbjct: 285 TQAREASMGGEVKALSDKVDSLS------NEVTREL-SKLTNMEDTLQGEEKNAEKMVHN 337
Query: 772 YEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNI---SQA 828
ED KK VE + S + E A EL+++F E TT+EE E Q + S
Sbjct: 338 IEDLKKSVE---ERASALNKCDEGAA----ELKQKFQEFSTTLEECEREHQGILAGKSSG 390
Query: 829 NSIFFLNQNILQ---EYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLV 885
+ L + + +++ L+TK +KELK +++ + +++ + L
Sbjct: 391 DEEKCLEDQLRDAKISVGTAETELKQLNTKISHCEKELKEKKSQLMSKQDEAVAVENELD 450
Query: 886 AQIN--ETFSRNFQEMAVA-GEV-SLD-EHESDFDKFGILIKVKFRQ-SGQL 931
A+ N E+ R F + G++ +L+ + ES+ + G +K K + S QL
Sbjct: 451 ARKNDVESVKRAFDSLPYKEGQMEALEKDRESELE-IGHRLKDKVHELSAQL 501
Score = 61 (26.5 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 41/214 (19%), Positives = 87/214 (40%)
Query: 776 KKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIFFLN 835
+K E ++ D K+ E A + ++ E+ +E +++ + I
Sbjct: 328 EKNAEKMVHNIEDLKKSVEERASALNKCDEGAAELKQKFQEFSTTLEECEREHQGIL-AG 386
Query: 836 QNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLVAQINETFSRN 895
++ E + + Q+ D + ELK+ +I +++ L+ +Q+ S+
Sbjct: 387 KSSGDEEKCLEDQLRDAKISVGTAETELKQLNTKISHCEKE----LKEKKSQL---MSK- 438
Query: 896 FQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVLSAHHQSGGE--RSVSTILYLV 953
Q+ AVA E LD ++D + + GQ+E L +S E + ++ +
Sbjct: 439 -QDEAVAVENELDARKNDVESVKRAFDSLPYKEGQMEALEKDRESELEIGHRLKDKVHEL 497
Query: 954 SLQDLTNCPFRVVDEINQGMDPINERKMFQQLVR 987
S Q L N F D + + D + + +L++
Sbjct: 498 SAQ-LANVQFTYRDPV-KNFDRSKVKGVVAKLIK 529
Score = 55 (24.4 bits), Expect = 3.3e-07, Sum P(3) = 3.3e-07
Identities = 31/161 (19%), Positives = 65/161 (40%)
Query: 751 IRELEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAE-----SIAFITPELEK 805
+ E E + H+K + + KE++ + +D K Q E F+ +
Sbjct: 676 LAEAETKFRAHQKSLSEIEANI----KELQPLQTKFTDMKAQLELKMYDMSLFLKRAEQN 731
Query: 806 EFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKR 865
E ++ +++LE +++ SQ L ++ ++ I+D +E K+L++
Sbjct: 732 EHHKLGDAVKKLEEEVEEMRSQIKEKEGLYKSCADTVSTLEKSIKDHDKNREGRLKDLEK 791
Query: 866 FLAEIDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVS 906
I LK + + ++L N ++ AV E S
Sbjct: 792 ---NIKTLKARIQASSKDLKGHENVRERLVMEQEAVTQEQS 829
Score = 54 (24.1 bits), Expect = 3.3e-07, Sum P(3) = 3.3e-07
Identities = 12/54 (22%), Positives = 31/54 (57%)
Query: 644 QTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDD 697
+TE + + + + +KE +E + + ++ + +EN ++ RK +ES+++ D
Sbjct: 411 ETELKQLNTKISHCEKELKEKKSQLMSKQDEAVAVENELDARKNDVESVKRAFD 464
Score = 54 (24.1 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 38/183 (20%), Positives = 88/183 (48%)
Query: 650 IEDEAAKLQ---KEREEII-NIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKL 705
+E+E +++ KE+E + + + +++H R+ +L+ +EK +I T A++
Sbjct: 743 LEEEVEEMRSQIKEKEGLYKSCADTVSTLEKSIKDHDKNREGRLKDLEK--NIKTLKARI 800
Query: 706 VDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNL-KQHEKL 764
QA+ +++ + E + E V+ + SY + + S+ +I L ++ Q K+
Sbjct: 801 --QASSKDLKGHENVRERLVMEQEAVTQEQSYLKSQLTSLR--TQISTLASDVGNQRAKV 856
Query: 765 -ALQASLHYEDCKK------EVEHCRKHLSDA-KRQAESIAFITP-ELEKEFLEMPTTIE 815
A+Q H + + +++ C +S + Q + + I+ +L+++ LE T
Sbjct: 857 DAIQKD-HDQSLSELKLIHAKMKECDTQISGSIAEQEKCLQKISDMKLDRKKLENEVTRM 915
Query: 816 ELE 818
E+E
Sbjct: 916 EME 918
Score = 53 (23.7 bits), Expect = 2.1e-16, Sum P(3) = 2.1e-16
Identities = 15/50 (30%), Positives = 23/50 (46%)
Query: 372 KLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNK 421
KLG + +L + + R Q EKE + T+ +KD DKN +
Sbjct: 735 KLGDAVKKLEEEVEEMRSQIKEKEGLYKSCADTVSTLEKSIKD-HDKNRE 783
Score = 53 (23.7 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 40/227 (17%), Positives = 94/227 (41%)
Query: 653 EAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEK---------EDDINTALA 703
E + +K R+ I++V+ K K ++ + + ++ +EK E + +
Sbjct: 238 EYVQAEKIRDNSIHVVEEMKIKMTGIDEQTDKTQGEISELEKQIKALTQAREASMGGEVK 297
Query: 704 KLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAK--IRELEFNLKQH 761
L D+ L+ + + ++ N+ + + + AEK + +IE D K + E L +
Sbjct: 298 ALSDKVDSLSNEVTRELSKLTNM-EDTLQGEEKNAEKMVHNIE-DLKKSVEERASALNKC 355
Query: 762 EKLALQASLHYEDCKKEVEHC-RKH--LSDAKRQAESIAFITPELEKEFLEMPTTIEELE 818
++ A + +++ +E C R+H + K + + +L + + T EL+
Sbjct: 356 DEGAAELKQKFQEFSTTLEECEREHQGILAGKSSGDEEKCLEDQLRDAKISVGTAETELK 415
Query: 819 AAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKR 865
+ IS ++ L + +E+ ++ D + +KR
Sbjct: 416 Q-LNTKISHCEKELKEKKSQLMSKQDEAVAVENELDARKNDVESVKR 461
Score = 49 (22.3 bits), Expect = 7.3e-06, Sum P(2) = 7.3e-06
Identities = 47/224 (20%), Positives = 97/224 (43%)
Query: 658 QKEREEI-INIVQIE--KRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAADLN- 713
QK EI NI +++ + K +M+ + L+ + K + N KL D L
Sbjct: 687 QKSLSEIEANIKELQPLQTKFTDMKAQLELKMYDMSLFLKRAEQNEH-HKLGDAVKKLEE 745
Query: 714 -IQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEF-NLKQHEK-LALQASL 770
+++ + I+ K L + + S EK SI+ K RE +L+++ K L +
Sbjct: 746 EVEEMRSQIKEKEGLYKSCADTVSTLEK---SIKDHDKNREGRLKDLEKNIKTLKARIQA 802
Query: 771 HYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANS 830
+D K E+ R+ L + E++ L+ + + T I L + + + ++ ++
Sbjct: 803 SSKDLKGH-ENVRERLV---MEQEAVTQEQSYLKSQLTSLRTQISTLASDVGNQRAKVDA 858
Query: 831 IFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALK 874
I + L E + ++++ T+ E ++ L +I +K
Sbjct: 859 IQKDHDQSLSELKLIHAKMKECDTQISGSIAEQEKCLQKISDMK 902
Score = 41 (19.5 bits), Expect = 1.0e-05, Sum P(3) = 1.0e-05
Identities = 7/22 (31%), Positives = 16/22 (72%)
Query: 643 MQTEQRLIEDEAAKLQKEREEI 664
+ T++ +IE + +K++K EE+
Sbjct: 996 LMTKKNIIETDKSKIKKVIEEL 1017
Score = 38 (18.4 bits), Expect = 2.6e-05, Sum P(3) = 2.6e-05
Identities = 26/101 (25%), Positives = 45/101 (44%)
Query: 155 VCEFAKLSPVKLLEETEKAVGD-PQLPVQHCALVEK-----SSKLKTIECTVKR-NGDTL 207
V E K+ + E+T+K G+ +L Q AL + ++K + V + +
Sbjct: 252 VVEEMKIKMTGIDEQTDKTQGEISELEKQIKALTQAREASMGGEVKALSDKVDSLSNEVT 311
Query: 208 NQLKAL-NVE-----QEKDVERVRQRAELLEK-VESMKKKL 241
+L L N+E +EK+ E++ E L+K VE L
Sbjct: 312 RELSKLTNMEDTLQGEEKNAEKMVHNIEDLKKSVEERASAL 352
Score = 38 (18.4 bits), Expect = 2.6e-05, Sum P(3) = 2.6e-05
Identities = 32/144 (22%), Positives = 61/144 (42%)
Query: 191 SKLKTIECTVKRNGDTLNQLKAL-NVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMK 249
SKL +E T++ G+ N K + N+E K + V +RA L K + +L K
Sbjct: 315 SKLTNMEDTLQ--GEEKNAEKMVHNIEDLK--KSVEERASALNKCDEGAAELK-----QK 365
Query: 250 KAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDG----DCKKLSSLIN-- 303
E+ ++ E K +E + ++ I G + K+L++ I+
Sbjct: 366 FQEFSTTLEECEREHQGILAGKSSGDE-EKCLEDQLRDAKISVGTAETELKQLNTKISHC 424
Query: 304 --ENSKRRMDFLEKVDQGVQVQGK 325
E +++ + K D+ V V+ +
Sbjct: 425 EKELKEKKSQLMSKQDEAVAVENE 448
Score = 38 (18.4 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 7/25 (28%), Positives = 13/25 (52%)
Query: 417 DKNNKLLHALRNSGAENIFEAYCWL 441
D + + L SG NI ++ C++
Sbjct: 24 DPHFNAITGLNGSGKSNILDSICFV 48
Score = 37 (18.1 bits), Expect = 8.8e-15, Sum P(3) = 8.8e-15
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 367 HDKIEKLGSQILELGVQANQKRLQKSEKE 395
HDK + + LE ++ + R+Q S K+
Sbjct: 778 HDKNREGRLKDLEKNIKTLKARIQASSKD 806
>UNIPROTKB|O93309 [details] [associations]
symbol:smc3 "Structural maintenance of chromosomes protein
3" species:8355 "Xenopus laevis" [GO:0000785 "chromatin"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006275 "regulation of DNA replication" evidence=ISS]
[GO:0030893 "meiotic cohesin complex" evidence=ISS]
InterPro:IPR010935 Pfam:PF06470 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0007126
GO:GO:0000775 GO:GO:0051301 GO:GO:0007067 GO:GO:0006275
GO:GO:0006281 GO:GO:0000785 GO:GO:0051276 SUPFAM:SSF75553
GO:GO:0030893 HOVERGEN:HBG039849 EMBL:BC094474 EMBL:AF051785
UniGene:Xl.290 UniGene:Xl.75355 ProteinModelPortal:O93309
IntAct:O93309 Uniprot:O93309
Length = 1209
Score = 159 (61.0 bits), Expect = 7.1e-16, Sum P(2) = 7.1e-16
Identities = 86/367 (23%), Positives = 158/367 (43%)
Query: 643 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRRE-MENHIN-LRKRK----LESIEKE- 695
+Q E R + +E KL+ + + RKR + +E +N LR+ + L + E
Sbjct: 807 LQQENRQLLNERIKLEGTITRVETYLNENLRKRLDQVEQELNELRETEGGTVLTATTSEL 866
Query: 696 DDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEK-HMASIEFDAKIREL 754
+ IN + + ++ L+I K +E K+L+ + +W EK HM +I D K EL
Sbjct: 867 EAINKRVKDTLARSEGLDITIDKTEVESKDLVKSMD--RWKNMEKDHMDAINHDTK--EL 922
Query: 755 EFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDA--KRQAESIAFITPELEKEFLEMPT 812
E + + + L+ E+C K++ +A K Q S+ + +LE+ E+
Sbjct: 923 E-KMTNRQGMLLKKK---EECMKKIRELGSLPQEAFEKYQTLSLKQLFRKLEQCNTELKK 978
Query: 813 TIEELEAAIQD--NISQANSIFFLNQNILQEYEHRQRQIEDLST-----KQEADKKELKR 865
+ A+ N S+ Q +E + + I +L K EA + K+
Sbjct: 979 YSHVNKKALDQFVNFSEQKEKLIKRQ---EELDRGHKSIMELMNVLELRKYEAIQLTFKQ 1035
Query: 866 FLAEIDALKEKWLPTLR-NLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKF-GILIKV 923
+ +K +P + LV + + Q+ GE S D+F G+ I+V
Sbjct: 1036 VSKNFSEVFQKLVPGGKATLVMKKGDVEGSQSQD---EGEGSTQSSVPSVDQFTGVGIRV 1092
Query: 924 KFRQSGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQ 983
F Q E+ SGG++S+ + + ++Q PF + DEI+Q +D + + +
Sbjct: 1093 SFTGK-QAEMREMQQLSGGQKSLVALALIFAIQKCDPAPFYLFDEIDQALDAQHRKAVSD 1151
Query: 984 QLVRAAS 990
++ AS
Sbjct: 1152 MIMELAS 1158
Score = 135 (52.6 bits), Expect = 7.1e-16, Sum P(2) = 7.1e-16
Identities = 95/452 (21%), Positives = 172/452 (38%)
Query: 23 IIEIELHNFMTF-DHLICKP-GSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI 80
I ++ + F ++ D I P S+ N+++G NGSGKS+ AI L + L R
Sbjct: 3 IKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHL-RPEQR 61
Query: 81 GAYVKRGEESGYIK--ISLRGDTKEEHLTI------MRKIDTRNKSEWFFNGKVVPKGEV 132
A + G I + + D + L I +R++ K ++F + K+V K +V
Sbjct: 62 LALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKNDV 121
Query: 133 LEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSK 192
+ + + +N + Q ++ + A + L+ + G V E S
Sbjct: 122 MNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTR---VYDERKEESISL 178
Query: 193 LKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAE 252
+K E KR D +N+L E+ +E ++ +K + M++ L + Y+ + E
Sbjct: 179 MKETEG--KR--DKINELLKYIEERLHTLEEEKEELAQYQKWDKMRRALEYTIYNQELNE 234
Query: 253 YIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCK-KLSSLINENSKRRMD 311
L + + K +E + K K+S++ E + +
Sbjct: 235 TRAKLDELSSKRETSGEKSRQLRDAQQDARDKMEEIERQVRELKSKISAMKEEKEQLSSE 294
Query: 312 FLEKVDQGVQVQGKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPAY-EPPHDKI 370
E++ Q +++ K K +LK R Q A EP +
Sbjct: 295 RQEQIKQRTKLELKTKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELAETEPKFSSV 354
Query: 371 -EKLGSQILELGVQANQKRLQ-------------KSEKEKILNQNKLTLRQCSDRLKDME 416
+K S I L QA Q+R K E++K + + +L Q + K
Sbjct: 355 KQKEESGIARLA-QATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQI 413
Query: 417 DKNNKLLHALRNSGAENIFEAYCWLQQHRHEL 448
NK L + +N+ E Y L Q +E+
Sbjct: 414 AAINKDLEETEVNKEKNL-EQYTKLDQDLNEV 444
Score = 74 (31.1 bits), Expect = 5.0e-07, Sum P(2) = 5.0e-07
Identities = 44/244 (18%), Positives = 105/244 (43%)
Query: 643 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEK-----EDD 697
+ + + IE + K + R+ I++ +++ K KR++ E ++R L+S+E E
Sbjct: 714 LMNQMQQIETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMEST 773
Query: 698 INTALAKL-VDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEF 756
+ A+L D + L+++ K + L EI + + I+ + I +E
Sbjct: 774 RESLKAELGTDLLSQLSLEDQK---RVDALNDEIRQLQQENRQLLNERIKLEGTITRVET 830
Query: 757 NLKQHEKLAL-QASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIE 815
L ++ + L Q + + E E L+ + E+I + + TI+
Sbjct: 831 YLNENLRKRLDQVEQELNELR-ETEGGTV-LTATTSELEAINKRVKDTLARSEGLDITID 888
Query: 816 ELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEA---DKKELKRFLAEIDA 872
+ E +D + + + ++ + H +++E ++ +Q K+E + + E+ +
Sbjct: 889 KTEVESKDLVKSMDRWKNMEKDHMDAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGS 948
Query: 873 LKEK 876
L ++
Sbjct: 949 LPQE 952
Score = 70 (29.7 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 20/75 (26%), Positives = 38/75 (50%)
Query: 802 ELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKK 861
EL+K+ ++ + LEA + +N+ + +I + I E + Q++ + T+Q K
Sbjct: 677 ELQKDVRKVEDELHALEAKLNENLRR--NI----ERINNEIDQLMNQMQQIETQQRKFKA 730
Query: 862 ELKRFLAEIDALKEK 876
L+E+ LKEK
Sbjct: 731 SRDSILSEMKMLKEK 745
Score = 56 (24.8 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 20/132 (15%), Positives = 57/132 (43%)
Query: 186 LVEKSSKLKTIECTVKRNGDT-LNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWL 244
L+ + +++T + K + D+ L+++K L ++++ + + L+ +E+ +
Sbjct: 714 LMNQMQQIETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMEST 773
Query: 245 KYDMKKAEYIXXXXXXXXXXXXXXXXXNT-LHEFSKPIEGKKQEKAILDGDCKKLSSLIN 303
+ +K N + + + E+ L+G ++ + +N
Sbjct: 774 RESLKAELGTDLLSQLSLEDQKRVDALNDEIRQLQQENRQLLNERIKLEGTITRVETYLN 833
Query: 304 ENSKRRMDFLEK 315
EN ++R+D +E+
Sbjct: 834 ENLRKRLDQVEQ 845
Score = 46 (21.3 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 15/62 (24%), Positives = 36/62 (58%)
Query: 192 KLKTIECTV---KRNGDTLNQ-LKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYD 247
+LK+++ + KR +N+ L+ V +EK++E+ + + L +V++ ++L Y+
Sbjct: 398 ELKSLDQAINDKKRQIAAINKDLEETEVNKEKNLEQYTKLDQDLNEVKTRVEELDKKYYE 457
Query: 248 MK 249
+K
Sbjct: 458 VK 459
Score = 43 (20.2 bits), Expect = 0.00073, Sum P(2) = 0.00073
Identities = 10/40 (25%), Positives = 21/40 (52%)
Query: 860 KKELKRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEM 899
+K++++ E+ AL+ K LR + +IN + +M
Sbjct: 679 QKDVRKVEDELHALEAKLNENLRRNIERINNEIDQLMNQM 718
Score = 40 (19.1 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 19/73 (26%), Positives = 36/73 (49%)
Query: 184 CALVEKSSKLK---TIECTVKRNGDTLNQLKALN----------VEQEKDVERVRQRAEL 230
C +E S++L T++C + GD ++ AL +E +KDV +V
Sbjct: 633 CRSMEVSTQLARAFTMDC-ITLEGDQVSHRGALTGGYYDTRKSRLELQKDVRKVEDELHA 691
Query: 231 LE-KV-ESMKKKL 241
LE K+ E++++ +
Sbjct: 692 LEAKLNENLRRNI 704
>GENEDB_PFALCIPARUM|PF11_0317 [details] [associations]
symbol:PF11_0317 "structural maintenance of
chromosome protein, putative" species:5833 "Plasmodium falciparum"
[GO:0000070 "mitotic sister chromatid segregation" evidence=ISS]
[GO:0003680 "AT DNA binding" evidence=ISS] [GO:0003690
"double-stranded DNA binding" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0008278 "cohesin complex" evidence=ISS]
InterPro:IPR010935 Pfam:PF06470 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0016887 GO:GO:0000070
GO:GO:0003690 GO:GO:0003680 EMBL:AE014186 GO:GO:0008278
SUPFAM:SSF75553 KO:K06636 HSSP:Q9X0R4 RefSeq:XP_001347988.1
ProteinModelPortal:Q8II57 EnsemblProtists:PF11_0317:mRNA
GeneID:810864 KEGG:pfa:PF11_0317 EuPathDB:PlasmoDB:PF3D7_1130700
HOGENOM:HOG000282411 OMA:CEREASK ProtClustDB:CLSZ2515177
Uniprot:Q8II57
Length = 1818
Score = 157 (60.3 bits), Expect = 1.1e-15, Sum P(3) = 1.1e-15
Identities = 62/234 (26%), Positives = 113/234 (48%)
Query: 26 IELHNFMTF-DHLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSIG--A 82
I + NF ++ D I P S+ +IGPNGSGKS+++ I ALG + + L R ++
Sbjct: 294 IIVSNFKSYEDENIIGPFSKFTSIIGPNGSGKSNIMDCICFALGINNKYL-RVKNLRNLI 352
Query: 83 YVKRGEESG-------YIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEI 135
Y K E++ Y+KI L + +E++ I R ++ + S ++ N K+V + E +
Sbjct: 353 YHKENEKAEDINKRICYVKIIL--ECNKENVEIKRTLNYKGVSNFYINDKLVDQKEYMNF 410
Query: 136 TKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKT 195
++ I+ T + Q + + P +L + E G + + + EK K K
Sbjct: 411 LRKNRIETKTKTCLIFQGDIEDIINKKPNELAKLFEYISGSDEYEQIYEDIKEKL-KEKQ 469
Query: 196 IECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMK 249
I C +N LN+ K +EQE + +++ + +E K K + +Y++K
Sbjct: 470 INC---KN--YLNEKK--KIEQEMKIHKIQMN----DNIEHNKLKENY-EYEIK 511
Score = 112 (44.5 bits), Expect = 1.1e-15, Sum P(3) = 1.1e-15
Identities = 38/169 (22%), Positives = 76/169 (44%)
Query: 834 LNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEK----WLPT---LRNLVA 886
+N N +EYE +++ + ++KE F L++K +L ++N++
Sbjct: 1605 VNCNAEKEYEKLTSKLKSIDVSLSEERKECNLFERNFRILQKKRSYKFLHCFNYIKNIID 1664
Query: 887 QINETFSRNFQEMAVAGEVSLDE---HESDFDKFGILIKVKFRQSGQLE-VLSAHHQSGG 942
+ + N + V G+ LD +E + D +K+ ++ SGG
Sbjct: 1665 NVYNNLTYNAKHH-VGGQAFLDLCNFNEFNKDDEPFYCGIKYNNMPPMKRYFEISELSGG 1723
Query: 943 ERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQ 991
E+S+S + + S+Q N F ++DE++ MDP+ + + + L SQ
Sbjct: 1724 EKSISALALIFSIQKYINNSFIILDEVDANMDPLKIQSLTRYLNSINSQ 1772
Score = 97 (39.2 bits), Expect = 1.2e-12, Sum P(3) = 1.2e-12
Identities = 60/252 (23%), Positives = 113/252 (44%)
Query: 656 KLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAADLNIQ 715
KL E+EE IN + R + IN ++ + E +K+ I++ L K NI
Sbjct: 1173 KLINEKEECINNINECNRNIIQTNELINKQQSEYELNKKK--ISSILIKK-------NI- 1222
Query: 716 QFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYEDC 775
F+ IE KN ++E K +K + +I+ K L+ K+ K S++ +D
Sbjct: 1223 -FEKEIEAKNKVMENYEQK---IDK-LKNIDLKKKFELLDTYEKELFKERNSLSMYQKDA 1277
Query: 776 KKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIFFL- 834
K + H K + + E ++ + + I++L I + + + N I FL
Sbjct: 1278 FKNLNHKLK-IDNIYEIIEHNLRDIDKINENINRIKNNIKKLNDDINELLDKKNEINFLE 1336
Query: 835 -NQNILQEYEHRQRQIEDLSTKQEADKKE----LKRFLAEIDALKEKWLPTLRNLVAQIN 889
N+ + E E+ ++Q+ L KQE + E +++ L +++ K L NL ++N
Sbjct: 1337 KNEESINE-ENIKKQLISLE-KQEKESNEQIDNIQKILQKLEEDKINIYKNLNNLNQELN 1394
Query: 890 E---TFSRNFQE 898
+ + NF++
Sbjct: 1395 QLRDNINTNFEK 1406
Score = 79 (32.9 bits), Expect = 8.1e-11, Sum P(3) = 8.1e-11
Identities = 55/251 (21%), Positives = 116/251 (46%)
Query: 658 QKEREEIINIVQIEKRKRREMENHINLRKR--KLESIEKE--DDINTALAKLVDQAADLN 713
+KE E +++ ++K +++N I+L+K+ L++ EKE + N+ D +LN
Sbjct: 1224 EKEIEAKNKVMENYEQKIDKLKN-IDLKKKFELLDTYEKELFKERNSLSMYQKDAFKNLN 1282
Query: 714 IQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIE-FDAKIRELEFNL-----KQHEKLALQ 767
+ ++I N+ EI+ +K +I I++L ++ K++E L+
Sbjct: 1283 -----HKLKIDNIY-EIIEHNLRDIDKINENINRIKNNIKKLNDDINELLDKKNEINFLE 1336
Query: 768 A---SLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDN 824
S++ E+ KK++ K ++ Q ++I I +LE++ + + + L + N
Sbjct: 1337 KNEESINEENIKKQLISLEKQEKESNEQIDNIQKILQKLEEDKINIYKNLNNLNQEL--N 1394
Query: 825 ISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNL 884
+ N +N N ++YEH + +IE+ K + + + + E D T NL
Sbjct: 1395 QLRDN----INTNF-EKYEHIENKIENCQKKIQIYTQFINDLINECDINSVNIFLT-NNL 1448
Query: 885 VAQINETFSRN 895
+ I++ N
Sbjct: 1449 LKDIHDQVDIN 1459
Score = 78 (32.5 bits), Expect = 1.1e-15, Sum P(3) = 1.1e-15
Identities = 56/211 (26%), Positives = 95/211 (45%)
Query: 646 EQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKL 705
E L+ E + LQ E ++I+N Q K+K +E + NL K+K ESI+ E+DI ++
Sbjct: 530 EDLLLYKEES-LQFE-QDILN--Q-NKKKANTLEKN-NLIKKK-ESIKIEEDIKKNYVQI 582
Query: 706 VDQAADLN--IQQFKYAIEIKNLLVEIVSCKWSYAE---KHMASIEFDAKI--RELEFNL 758
LN ++ K+ + LV K + E K M ++ K ++LE
Sbjct: 583 NQLKILLNEISEKKKFCNDSLQKLVSNKKLKINMQEHCNKFMENLNLQIKEQNKKLENEY 642
Query: 759 KQHEKLALQASLHYEDC-----KKEVEHCR--KHLSDAKRQAESIAFITPELEKEFLEMP 811
K K+ ++ YE C K ++E C+ H+ D + Q ES + E K+ +
Sbjct: 643 KNKLKINIKFFSKYE-CVQNIIKTKIEECKMNSHI-DQQDQNESNVHLNNENIKKKNDKK 700
Query: 812 TTIEELEAAIQDNISQANSIFFLNQNILQEY 842
++L D++ +N N N + EY
Sbjct: 701 GK-KKLNINNHDDMKISNQDVSNNNNNMMEY 730
Score = 63 (27.2 bits), Expect = 1.1e-13, Sum P(4) = 1.1e-13
Identities = 28/111 (25%), Positives = 53/111 (47%)
Query: 362 AYEPPHDKIEKLGSQILEL--GVQANQKR--------LQKSEKEKILNQNKLTLRQCSDR 411
AY+ +++I KL S I E +Q N+ + LQK ++ +IL + L +
Sbjct: 833 AYDQLNERIYKLNSVIKEQDDNIQNNKMKIKMWNETILQKEKQIEILEEQTNILNVHKNE 892
Query: 412 LKDMEDKNNKLLHALRNS-GAENIFEAYCWLQQHRHELNKEAYGPVLLEVN 461
L E K + ++ L+N+ G + +F+ L Q +++ A V+ + N
Sbjct: 893 LISFEKKRD-IIKNLKNTFGHDQVFDEVSNLYQVNNQIYYTAVNNVIHKYN 942
Score = 63 (27.2 bits), Expect = 3.3e-09, Sum P(3) = 3.3e-09
Identities = 31/171 (18%), Positives = 78/171 (45%)
Query: 671 EKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEI 730
+K+K++E + +K + S D +KL++ D + +Q +Y N
Sbjct: 1489 KKKKKKESKGKSKSKKNHMSS----DPYQKRKSKLLE---DSDSEQ-EYNTSNSNNTSCN 1540
Query: 731 VSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAK 790
+S + + +H + + + + F+L + L+ + +D E E+ K + + K
Sbjct: 1541 ISEEENDIHEHDEEEQNNILLSNISFDLLSDD---LKNMENDKDINNEKENMEKEI-ERK 1596
Query: 791 RQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQE 841
++ + + EKE+ ++ + ++ ++ ++ + + N +F N ILQ+
Sbjct: 1597 KKLLKLKNVNCNAEKEYEKLTSKLKSIDVSLSEERKECN-LFERNFRILQK 1646
Score = 61 (26.5 bits), Expect = 8.4e-07, Sum P(3) = 8.4e-07
Identities = 31/123 (25%), Positives = 58/123 (47%)
Query: 757 NLKQHEKLALQASLHYEDCKKEVEHC----RKHLSDA-KRQAESIAFITPELEKEFLEMP 811
N+ + L SL +D K+ E C RK + + ++E +A+ +L + ++
Sbjct: 789 NININNYTNLSCSLK-KDIKELQEECDTLNRKKQKELLEYESEKLAY--DQLNERIYKLN 845
Query: 812 TTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEID 871
+ I+E + IQ+N + I N+ ILQ+ E + +E+ + K EL F + D
Sbjct: 846 SVIKEQDDNIQNNKMK---IKMWNETILQK-EKQIEILEEQTNILNVHKNELISFEKKRD 901
Query: 872 ALK 874
+K
Sbjct: 902 IIK 904
Score = 56 (24.8 bits), Expect = 6.8e-13, Sum P(4) = 6.8e-13
Identities = 30/128 (23%), Positives = 59/128 (46%)
Query: 650 IEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQA 709
+++E L +++++ +++ E K + +N R KL S+ KE D N Q
Sbjct: 809 LQEECDTLNRKKQK--ELLEYESEKLAY--DQLNERIYKLNSVIKEQDDNI-------QN 857
Query: 710 ADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMAS-IEFDAKIRELEFNLKQ---HEKLA 765
+ I+ + I K +EI+ + + H I F+ K R++ NLK H+++
Sbjct: 858 NKMKIKMWNETILQKEKQIEILEEQTNILNVHKNELISFEKK-RDIIKNLKNTFGHDQVF 916
Query: 766 LQASLHYE 773
+ S Y+
Sbjct: 917 DEVSNLYQ 924
Score = 54 (24.1 bits), Expect = 8.5e-13, Sum P(4) = 8.5e-13
Identities = 17/78 (21%), Positives = 41/78 (52%)
Query: 377 ILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGA---EN 433
I E+ ++ N + + K + +N+ K +++ +D + ++ DK N++ +N + EN
Sbjct: 1290 IYEI-IEHNLRDIDKINEN--INRIKNNIKKLNDDINELLDKKNEINFLEKNEESINEEN 1346
Query: 434 IFEAYCWLQQHRHELNKE 451
I + L++ E N++
Sbjct: 1347 IKKQLISLEKQEKESNEQ 1364
Score = 54 (24.1 bits), Expect = 8.2e-10, Sum P(3) = 8.2e-10
Identities = 37/184 (20%), Positives = 83/184 (45%)
Query: 814 IEELEAAIQDNISQAN-SIFFLNQNILQ---EYEHRQRQIEDLSTKQEADKKELKRFLAE 869
I E E I +NI++ N +I N+ I + EYE +++I + K+ +KE++
Sbjct: 1175 INEKEECI-NNINECNRNIIQTNELINKQQSEYELNKKKISSILIKKNIFEKEIEAKNKV 1233
Query: 870 IDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSG 929
++ ++K + L+N+ + +++ SL ++ D K + K +
Sbjct: 1234 MENYEQK-IDKLKNIDLKKKFELLDTYEKELFKERNSLSMYQKDAFKN---LNHKLKIDN 1289
Query: 930 QLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAA 989
E++ H+ R + I ++ + N ++ D+IN+ +D NE ++ +
Sbjct: 1290 IYEIIE-HNL----RDIDKINE--NINRIKNNIKKLNDDINELLDKKNEINFLEKNEESI 1342
Query: 990 SQPN 993
++ N
Sbjct: 1343 NEEN 1346
Score = 51 (23.0 bits), Expect = 1.7e-12, Sum P(4) = 1.7e-12
Identities = 18/71 (25%), Positives = 32/71 (45%)
Query: 392 SEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAENIFEAYCWLQQHRHELNKE 451
S+ EK N +L + + + + E+ N + RN N QQ +ELNK+
Sbjct: 1156 SDIEKF-NNKRLNINLYNKLINEKEECINNINECNRNIIQTN---ELINKQQSEYELNKK 1211
Query: 452 AYGPVLLEVNV 462
+L++ N+
Sbjct: 1212 KISSILIKKNI 1222
Score = 49 (22.3 bits), Expect = 8.4e-12, Sum P(4) = 8.4e-12
Identities = 17/49 (34%), Positives = 27/49 (55%)
Query: 386 QKRLQKSEKEKI-LNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAEN 433
QK LQK E++KI + +N L Q ++L+D + N + + N EN
Sbjct: 1369 QKILQKLEEDKINIYKNLNNLNQELNQLRDNINTNFEKYEHIENK-IEN 1416
Score = 42 (19.8 bits), Expect = 1.1e-13, Sum P(4) = 1.1e-13
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 657 LQKEREEIINIVQIEKRKRREME---NHINLRKRKLESIEKE 695
LQK E+ INI + +E+ ++IN K E IE +
Sbjct: 1372 LQKLEEDKINIYKNLNNLNQELNQLRDNINTNFEKYEHIENK 1413
Score = 42 (19.8 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 44/245 (17%), Positives = 94/245 (38%)
Query: 643 MQTEQ-RLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTA 701
+Q Q +++ +E ++ +K + + + K+ + M+ H N L KE N
Sbjct: 580 VQINQLKILLNEISEKKKFCNDSLQKLVSNKKLKINMQEHCNKFMENLNLQIKEQ--NKK 637
Query: 702 LAKLVDQAADLNIQQF-KYAIEIKNLL-VEIVSCKWSYAEKHMASIEFDAKIRELEFNLK 759
L +NI+ F KY ++N++ +I CK + E + + K
Sbjct: 638 LENEYKNKLKINIKFFSKYEC-VQNIIKTKIEECKMNSHIDQQDQNESNVHLNNENIKKK 696
Query: 760 QHEKLALQASLH-YEDCK---KEVEHCRKHLSDAKRQAESIAFITPE--LEKEFLEMPTT 813
+K + +++ ++D K ++V + ++ + + F+ E L K ++
Sbjct: 697 NDKKGKKKLNINNHDDMKISNQDVSNNNNNMMEY--YTNMLNFLKDEKILNKIHIDSTNN 754
Query: 814 IEEL--EAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEID 871
E I + I + + L + I + + + KK++K E D
Sbjct: 755 YENPYENYNIIEFIENIDEYKKCKETYLYLCANSNININNYTNLSCSLKKDIKELQEECD 814
Query: 872 ALKEK 876
L K
Sbjct: 815 TLNRK 819
Score = 41 (19.5 bits), Expect = 6.8e-13, Sum P(4) = 6.8e-13
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 398 LNQNKLTLRQCSDRLKDMEDKNNKLL 423
+NQ K+ L + S++ K D KL+
Sbjct: 582 INQLKILLNEISEKKKFCNDSLQKLV 607
Score = 41 (19.5 bits), Expect = 1.7e-11, Sum P(4) = 1.7e-11
Identities = 8/28 (28%), Positives = 17/28 (60%)
Query: 397 ILNQNKLTLRQCSDRLKDMEDKNNKLLH 424
++++N + ++R D+E NNK L+
Sbjct: 1140 VISKNNNLIIDITNRYSDIEKFNNKRLN 1167
Score = 37 (18.1 bits), Expect = 8.4e-12, Sum P(4) = 8.4e-12
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 284 KKQEKAILDGDCKKLSSLINENSKRRMDFLEKVDQ 318
KK E L+ K S+ EN K+++ LEK ++
Sbjct: 1328 KKNEINFLE---KNEESINEENIKKQLISLEKQEK 1359
Score = 37 (18.1 bits), Expect = 1.3e-10, Sum P(4) = 1.3e-10
Identities = 18/71 (25%), Positives = 29/71 (40%)
Query: 367 HDKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHAL 426
HD+ E+ + + L+ E +K +N K + K++E K KLL
Sbjct: 1551 HDEEEQNNILLSNISFDLLSDDLKNMENDKDINNEKENME------KEIERKK-KLLKLK 1603
Query: 427 R-NSGAENIFE 436
N AE +E
Sbjct: 1604 NVNCNAEKEYE 1614
>UNIPROTKB|Q8II57 [details] [associations]
symbol:PF11_0317 "Structural maintenance of chromosome
protein, putative" species:36329 "Plasmodium falciparum 3D7"
[GO:0000070 "mitotic sister chromatid segregation" evidence=ISS]
[GO:0003680 "AT DNA binding" evidence=ISS] [GO:0003690
"double-stranded DNA binding" evidence=ISS] [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0008278 "cohesin complex"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
InterPro:IPR010935 Pfam:PF06470 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0016887 GO:GO:0000070
GO:GO:0003690 GO:GO:0003680 EMBL:AE014186 GO:GO:0008278
SUPFAM:SSF75553 KO:K06636 HSSP:Q9X0R4 RefSeq:XP_001347988.1
ProteinModelPortal:Q8II57 EnsemblProtists:PF11_0317:mRNA
GeneID:810864 KEGG:pfa:PF11_0317 EuPathDB:PlasmoDB:PF3D7_1130700
HOGENOM:HOG000282411 OMA:CEREASK ProtClustDB:CLSZ2515177
Uniprot:Q8II57
Length = 1818
Score = 157 (60.3 bits), Expect = 1.1e-15, Sum P(3) = 1.1e-15
Identities = 62/234 (26%), Positives = 113/234 (48%)
Query: 26 IELHNFMTF-DHLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSIG--A 82
I + NF ++ D I P S+ +IGPNGSGKS+++ I ALG + + L R ++
Sbjct: 294 IIVSNFKSYEDENIIGPFSKFTSIIGPNGSGKSNIMDCICFALGINNKYL-RVKNLRNLI 352
Query: 83 YVKRGEESG-------YIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEI 135
Y K E++ Y+KI L + +E++ I R ++ + S ++ N K+V + E +
Sbjct: 353 YHKENEKAEDINKRICYVKIIL--ECNKENVEIKRTLNYKGVSNFYINDKLVDQKEYMNF 410
Query: 136 TKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKT 195
++ I+ T + Q + + P +L + E G + + + EK K K
Sbjct: 411 LRKNRIETKTKTCLIFQGDIEDIINKKPNELAKLFEYISGSDEYEQIYEDIKEKL-KEKQ 469
Query: 196 IECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMK 249
I C +N LN+ K +EQE + +++ + +E K K + +Y++K
Sbjct: 470 INC---KN--YLNEKK--KIEQEMKIHKIQMN----DNIEHNKLKENY-EYEIK 511
Score = 112 (44.5 bits), Expect = 1.1e-15, Sum P(3) = 1.1e-15
Identities = 38/169 (22%), Positives = 76/169 (44%)
Query: 834 LNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEK----WLPT---LRNLVA 886
+N N +EYE +++ + ++KE F L++K +L ++N++
Sbjct: 1605 VNCNAEKEYEKLTSKLKSIDVSLSEERKECNLFERNFRILQKKRSYKFLHCFNYIKNIID 1664
Query: 887 QINETFSRNFQEMAVAGEVSLDE---HESDFDKFGILIKVKFRQSGQLE-VLSAHHQSGG 942
+ + N + V G+ LD +E + D +K+ ++ SGG
Sbjct: 1665 NVYNNLTYNAKHH-VGGQAFLDLCNFNEFNKDDEPFYCGIKYNNMPPMKRYFEISELSGG 1723
Query: 943 ERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQ 991
E+S+S + + S+Q N F ++DE++ MDP+ + + + L SQ
Sbjct: 1724 EKSISALALIFSIQKYINNSFIILDEVDANMDPLKIQSLTRYLNSINSQ 1772
Score = 97 (39.2 bits), Expect = 1.2e-12, Sum P(3) = 1.2e-12
Identities = 60/252 (23%), Positives = 113/252 (44%)
Query: 656 KLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAADLNIQ 715
KL E+EE IN + R + IN ++ + E +K+ I++ L K NI
Sbjct: 1173 KLINEKEECINNINECNRNIIQTNELINKQQSEYELNKKK--ISSILIKK-------NI- 1222
Query: 716 QFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYEDC 775
F+ IE KN ++E K +K + +I+ K L+ K+ K S++ +D
Sbjct: 1223 -FEKEIEAKNKVMENYEQK---IDK-LKNIDLKKKFELLDTYEKELFKERNSLSMYQKDA 1277
Query: 776 KKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIFFL- 834
K + H K + + E ++ + + I++L I + + + N I FL
Sbjct: 1278 FKNLNHKLK-IDNIYEIIEHNLRDIDKINENINRIKNNIKKLNDDINELLDKKNEINFLE 1336
Query: 835 -NQNILQEYEHRQRQIEDLSTKQEADKKE----LKRFLAEIDALKEKWLPTLRNLVAQIN 889
N+ + E E+ ++Q+ L KQE + E +++ L +++ K L NL ++N
Sbjct: 1337 KNEESINE-ENIKKQLISLE-KQEKESNEQIDNIQKILQKLEEDKINIYKNLNNLNQELN 1394
Query: 890 E---TFSRNFQE 898
+ + NF++
Sbjct: 1395 QLRDNINTNFEK 1406
Score = 79 (32.9 bits), Expect = 8.1e-11, Sum P(3) = 8.1e-11
Identities = 55/251 (21%), Positives = 116/251 (46%)
Query: 658 QKEREEIINIVQIEKRKRREMENHINLRKR--KLESIEKE--DDINTALAKLVDQAADLN 713
+KE E +++ ++K +++N I+L+K+ L++ EKE + N+ D +LN
Sbjct: 1224 EKEIEAKNKVMENYEQKIDKLKN-IDLKKKFELLDTYEKELFKERNSLSMYQKDAFKNLN 1282
Query: 714 IQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIE-FDAKIRELEFNL-----KQHEKLALQ 767
+ ++I N+ EI+ +K +I I++L ++ K++E L+
Sbjct: 1283 -----HKLKIDNIY-EIIEHNLRDIDKINENINRIKNNIKKLNDDINELLDKKNEINFLE 1336
Query: 768 A---SLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDN 824
S++ E+ KK++ K ++ Q ++I I +LE++ + + + L + N
Sbjct: 1337 KNEESINEENIKKQLISLEKQEKESNEQIDNIQKILQKLEEDKINIYKNLNNLNQEL--N 1394
Query: 825 ISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNL 884
+ N +N N ++YEH + +IE+ K + + + + E D T NL
Sbjct: 1395 QLRDN----INTNF-EKYEHIENKIENCQKKIQIYTQFINDLINECDINSVNIFLT-NNL 1448
Query: 885 VAQINETFSRN 895
+ I++ N
Sbjct: 1449 LKDIHDQVDIN 1459
Score = 78 (32.5 bits), Expect = 1.1e-15, Sum P(3) = 1.1e-15
Identities = 56/211 (26%), Positives = 95/211 (45%)
Query: 646 EQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKL 705
E L+ E + LQ E ++I+N Q K+K +E + NL K+K ESI+ E+DI ++
Sbjct: 530 EDLLLYKEES-LQFE-QDILN--Q-NKKKANTLEKN-NLIKKK-ESIKIEEDIKKNYVQI 582
Query: 706 VDQAADLN--IQQFKYAIEIKNLLVEIVSCKWSYAE---KHMASIEFDAKI--RELEFNL 758
LN ++ K+ + LV K + E K M ++ K ++LE
Sbjct: 583 NQLKILLNEISEKKKFCNDSLQKLVSNKKLKINMQEHCNKFMENLNLQIKEQNKKLENEY 642
Query: 759 KQHEKLALQASLHYEDC-----KKEVEHCR--KHLSDAKRQAESIAFITPELEKEFLEMP 811
K K+ ++ YE C K ++E C+ H+ D + Q ES + E K+ +
Sbjct: 643 KNKLKINIKFFSKYE-CVQNIIKTKIEECKMNSHI-DQQDQNESNVHLNNENIKKKNDKK 700
Query: 812 TTIEELEAAIQDNISQANSIFFLNQNILQEY 842
++L D++ +N N N + EY
Sbjct: 701 GK-KKLNINNHDDMKISNQDVSNNNNNMMEY 730
Score = 63 (27.2 bits), Expect = 1.1e-13, Sum P(4) = 1.1e-13
Identities = 28/111 (25%), Positives = 53/111 (47%)
Query: 362 AYEPPHDKIEKLGSQILEL--GVQANQKR--------LQKSEKEKILNQNKLTLRQCSDR 411
AY+ +++I KL S I E +Q N+ + LQK ++ +IL + L +
Sbjct: 833 AYDQLNERIYKLNSVIKEQDDNIQNNKMKIKMWNETILQKEKQIEILEEQTNILNVHKNE 892
Query: 412 LKDMEDKNNKLLHALRNS-GAENIFEAYCWLQQHRHELNKEAYGPVLLEVN 461
L E K + ++ L+N+ G + +F+ L Q +++ A V+ + N
Sbjct: 893 LISFEKKRD-IIKNLKNTFGHDQVFDEVSNLYQVNNQIYYTAVNNVIHKYN 942
Score = 63 (27.2 bits), Expect = 3.3e-09, Sum P(3) = 3.3e-09
Identities = 31/171 (18%), Positives = 78/171 (45%)
Query: 671 EKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEI 730
+K+K++E + +K + S D +KL++ D + +Q +Y N
Sbjct: 1489 KKKKKKESKGKSKSKKNHMSS----DPYQKRKSKLLE---DSDSEQ-EYNTSNSNNTSCN 1540
Query: 731 VSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAK 790
+S + + +H + + + + F+L + L+ + +D E E+ K + + K
Sbjct: 1541 ISEEENDIHEHDEEEQNNILLSNISFDLLSDD---LKNMENDKDINNEKENMEKEI-ERK 1596
Query: 791 RQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQE 841
++ + + EKE+ ++ + ++ ++ ++ + + N +F N ILQ+
Sbjct: 1597 KKLLKLKNVNCNAEKEYEKLTSKLKSIDVSLSEERKECN-LFERNFRILQK 1646
Score = 61 (26.5 bits), Expect = 8.4e-07, Sum P(3) = 8.4e-07
Identities = 31/123 (25%), Positives = 58/123 (47%)
Query: 757 NLKQHEKLALQASLHYEDCKKEVEHC----RKHLSDA-KRQAESIAFITPELEKEFLEMP 811
N+ + L SL +D K+ E C RK + + ++E +A+ +L + ++
Sbjct: 789 NININNYTNLSCSLK-KDIKELQEECDTLNRKKQKELLEYESEKLAY--DQLNERIYKLN 845
Query: 812 TTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEID 871
+ I+E + IQ+N + I N+ ILQ+ E + +E+ + K EL F + D
Sbjct: 846 SVIKEQDDNIQNNKMK---IKMWNETILQK-EKQIEILEEQTNILNVHKNELISFEKKRD 901
Query: 872 ALK 874
+K
Sbjct: 902 IIK 904
Score = 56 (24.8 bits), Expect = 6.8e-13, Sum P(4) = 6.8e-13
Identities = 30/128 (23%), Positives = 59/128 (46%)
Query: 650 IEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQA 709
+++E L +++++ +++ E K + +N R KL S+ KE D N Q
Sbjct: 809 LQEECDTLNRKKQK--ELLEYESEKLAY--DQLNERIYKLNSVIKEQDDNI-------QN 857
Query: 710 ADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMAS-IEFDAKIRELEFNLKQ---HEKLA 765
+ I+ + I K +EI+ + + H I F+ K R++ NLK H+++
Sbjct: 858 NKMKIKMWNETILQKEKQIEILEEQTNILNVHKNELISFEKK-RDIIKNLKNTFGHDQVF 916
Query: 766 LQASLHYE 773
+ S Y+
Sbjct: 917 DEVSNLYQ 924
Score = 54 (24.1 bits), Expect = 8.5e-13, Sum P(4) = 8.5e-13
Identities = 17/78 (21%), Positives = 41/78 (52%)
Query: 377 ILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGA---EN 433
I E+ ++ N + + K + +N+ K +++ +D + ++ DK N++ +N + EN
Sbjct: 1290 IYEI-IEHNLRDIDKINEN--INRIKNNIKKLNDDINELLDKKNEINFLEKNEESINEEN 1346
Query: 434 IFEAYCWLQQHRHELNKE 451
I + L++ E N++
Sbjct: 1347 IKKQLISLEKQEKESNEQ 1364
Score = 54 (24.1 bits), Expect = 8.2e-10, Sum P(3) = 8.2e-10
Identities = 37/184 (20%), Positives = 83/184 (45%)
Query: 814 IEELEAAIQDNISQAN-SIFFLNQNILQ---EYEHRQRQIEDLSTKQEADKKELKRFLAE 869
I E E I +NI++ N +I N+ I + EYE +++I + K+ +KE++
Sbjct: 1175 INEKEECI-NNINECNRNIIQTNELINKQQSEYELNKKKISSILIKKNIFEKEIEAKNKV 1233
Query: 870 IDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSG 929
++ ++K + L+N+ + +++ SL ++ D K + K +
Sbjct: 1234 MENYEQK-IDKLKNIDLKKKFELLDTYEKELFKERNSLSMYQKDAFKN---LNHKLKIDN 1289
Query: 930 QLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAA 989
E++ H+ R + I ++ + N ++ D+IN+ +D NE ++ +
Sbjct: 1290 IYEIIE-HNL----RDIDKINE--NINRIKNNIKKLNDDINELLDKKNEINFLEKNEESI 1342
Query: 990 SQPN 993
++ N
Sbjct: 1343 NEEN 1346
Score = 51 (23.0 bits), Expect = 1.7e-12, Sum P(4) = 1.7e-12
Identities = 18/71 (25%), Positives = 32/71 (45%)
Query: 392 SEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAENIFEAYCWLQQHRHELNKE 451
S+ EK N +L + + + + E+ N + RN N QQ +ELNK+
Sbjct: 1156 SDIEKF-NNKRLNINLYNKLINEKEECINNINECNRNIIQTN---ELINKQQSEYELNKK 1211
Query: 452 AYGPVLLEVNV 462
+L++ N+
Sbjct: 1212 KISSILIKKNI 1222
Score = 49 (22.3 bits), Expect = 8.4e-12, Sum P(4) = 8.4e-12
Identities = 17/49 (34%), Positives = 27/49 (55%)
Query: 386 QKRLQKSEKEKI-LNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAEN 433
QK LQK E++KI + +N L Q ++L+D + N + + N EN
Sbjct: 1369 QKILQKLEEDKINIYKNLNNLNQELNQLRDNINTNFEKYEHIENK-IEN 1416
Score = 42 (19.8 bits), Expect = 1.1e-13, Sum P(4) = 1.1e-13
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 657 LQKEREEIINIVQIEKRKRREME---NHINLRKRKLESIEKE 695
LQK E+ INI + +E+ ++IN K E IE +
Sbjct: 1372 LQKLEEDKINIYKNLNNLNQELNQLRDNINTNFEKYEHIENK 1413
Score = 42 (19.8 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 44/245 (17%), Positives = 94/245 (38%)
Query: 643 MQTEQ-RLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTA 701
+Q Q +++ +E ++ +K + + + K+ + M+ H N L KE N
Sbjct: 580 VQINQLKILLNEISEKKKFCNDSLQKLVSNKKLKINMQEHCNKFMENLNLQIKEQ--NKK 637
Query: 702 LAKLVDQAADLNIQQF-KYAIEIKNLL-VEIVSCKWSYAEKHMASIEFDAKIRELEFNLK 759
L +NI+ F KY ++N++ +I CK + E + + K
Sbjct: 638 LENEYKNKLKINIKFFSKYEC-VQNIIKTKIEECKMNSHIDQQDQNESNVHLNNENIKKK 696
Query: 760 QHEKLALQASLH-YEDCK---KEVEHCRKHLSDAKRQAESIAFITPE--LEKEFLEMPTT 813
+K + +++ ++D K ++V + ++ + + F+ E L K ++
Sbjct: 697 NDKKGKKKLNINNHDDMKISNQDVSNNNNNMMEY--YTNMLNFLKDEKILNKIHIDSTNN 754
Query: 814 IEEL--EAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEID 871
E I + I + + L + I + + + KK++K E D
Sbjct: 755 YENPYENYNIIEFIENIDEYKKCKETYLYLCANSNININNYTNLSCSLKKDIKELQEECD 814
Query: 872 ALKEK 876
L K
Sbjct: 815 TLNRK 819
Score = 41 (19.5 bits), Expect = 6.8e-13, Sum P(4) = 6.8e-13
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 398 LNQNKLTLRQCSDRLKDMEDKNNKLL 423
+NQ K+ L + S++ K D KL+
Sbjct: 582 INQLKILLNEISEKKKFCNDSLQKLV 607
Score = 41 (19.5 bits), Expect = 1.7e-11, Sum P(4) = 1.7e-11
Identities = 8/28 (28%), Positives = 17/28 (60%)
Query: 397 ILNQNKLTLRQCSDRLKDMEDKNNKLLH 424
++++N + ++R D+E NNK L+
Sbjct: 1140 VISKNNNLIIDITNRYSDIEKFNNKRLN 1167
Score = 37 (18.1 bits), Expect = 8.4e-12, Sum P(4) = 8.4e-12
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 284 KKQEKAILDGDCKKLSSLINENSKRRMDFLEKVDQ 318
KK E L+ K S+ EN K+++ LEK ++
Sbjct: 1328 KKNEINFLE---KNEESINEENIKKQLISLEKQEK 1359
Score = 37 (18.1 bits), Expect = 1.3e-10, Sum P(4) = 1.3e-10
Identities = 18/71 (25%), Positives = 29/71 (40%)
Query: 367 HDKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHAL 426
HD+ E+ + + L+ E +K +N K + K++E K KLL
Sbjct: 1551 HDEEEQNNILLSNISFDLLSDDLKNMENDKDINNEKENME------KEIERKK-KLLKLK 1603
Query: 427 R-NSGAENIFE 436
N AE +E
Sbjct: 1604 NVNCNAEKEYE 1614
>UNIPROTKB|F1SP73 [details] [associations]
symbol:F1SP73 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007076 "mitotic chromosome condensation" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000796
"condensin complex" evidence=IEA] InterPro:IPR024704
InterPro:IPR010935 InterPro:IPR027120 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0005694 GO:GO:0006281 GO:GO:0006310
GO:GO:0030261 GO:GO:0007062 SUPFAM:SSF75553
GeneTree:ENSGT00550000074857 PANTHER:PTHR18937:SF9 OMA:WIASERQ
Ensembl:ENSSSCT00000005947 Uniprot:F1SP73
Length = 1169
Score = 179 (68.1 bits), Expect = 1.2e-15, Sum P(4) = 1.2e-15
Identities = 75/343 (21%), Positives = 146/343 (42%)
Query: 652 DEAAKLQKEREEIINIVQIE----KRKRREMENHINLRKRKLESIEKEDDINTALAKLVD 707
D ++K KE+++ + + +E KR+ E + ++S E + I A++
Sbjct: 784 DASSKKMKEKQQEVEAITLELEELKREHASCEQQLEAVNEAIKSYEGQ--IAVVAAEVAK 841
Query: 708 QAADLNIQQFKYAIEIKNLLVE--IVSCKWSYAEKHMA-SIEFDAKIRELEFNLKQHEKL 764
+N Q + + + + + IV K++ KH + E+ KI+EL+ N+ +H++
Sbjct: 842 NKESVNKAQEEVTKQKEVITAQDNIVKAKYAEVAKHKEQNNEYQLKIKELDHNINKHKRE 901
Query: 765 ALQASLHYEDCKKEVE--HCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQ 822
A A+ K+ + + KHL A P KE + +EE++ +
Sbjct: 902 AEDAAAKVSKMLKDYDWINTDKHLFGQPNTAYDFKTTNP---KEASQRLQKLEEMKEKLG 958
Query: 823 DNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLR 882
N++ N+L E E R DL K+ + + + LA I+ L +K L
Sbjct: 959 RNVNMRA------MNVLTEAEERYN---DLMKKKRIVENDKSKILATIEDLDQKKNQALN 1009
Query: 883 NLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVLSAHHQSGG 942
++N+ F F + L E G+ KV + + E L+ SGG
Sbjct: 1010 IAWQKVNKDFGSIFSTLLPGANAMLAPPEGQTVLDGLEFKVALGNTWK-ENLT--ELSGG 1066
Query: 943 ERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQL 985
+RS+ + ++S+ P ++DE++ +D + + + Q L
Sbjct: 1067 QRSLVALSLILSMLLFKPAPIYILDEVDAALDLSHTQNIGQML 1109
Score = 99 (39.9 bits), Expect = 3.1e-06, Sum P(3) = 3.1e-06
Identities = 46/211 (21%), Positives = 97/211 (45%)
Query: 676 REMENHINLRKRKLESIEKEDDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKW 735
+++++ + +++ +L+++E+E LA L + A +Q K E+K +++ K
Sbjct: 660 KDVQDELRIKENELQALEEE------LAHLKNTAE--KYRQLKQQWEMKTEEADLLQTKL 711
Query: 736 SYAEKHMASIEFDAK---IRELEFNLKQHEKLALQASLHYEDCKKEVEHCR----KHLSD 788
+ H E DA I E E LK +++ +A YE + ++++ + L D
Sbjct: 712 QQSSYHKQQEELDALKKIIEESEETLKNTKEIQKKAEEKYEVLENKMKNAEAERERELKD 771
Query: 789 AKRQAESIAFITPELEKEFLEMPTTIE----ELEAAIQDNISQANSIFFLNQNILQEYEH 844
A+R+ +S K+ E +E ELE +++ S + +N+ I + YE
Sbjct: 772 AQRKLDSAKTKADASSKKMKEKQQEVEAITLELEELKREHASCEQQLEAVNEAI-KSYEG 830
Query: 845 RQRQIEDLSTKQEADKKELKRFLAEIDALKE 875
QI ++ + +K+ + + E+ KE
Sbjct: 831 ---QIAVVAAEVAKNKESVNKAQEEVTKQKE 858
Score = 95 (38.5 bits), Expect = 1.2e-15, Sum P(4) = 1.2e-15
Identities = 31/135 (22%), Positives = 61/135 (45%)
Query: 46 NLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSIGAYVKRGEESGYIKISL-----RGD 100
N + G NGSGKS+++ +I LG RA+++ V + ++G K S+ D
Sbjct: 28 NAITGLNGSGKSNILDSICFLLGISNLSQVRASNLQDLVYKNGQAGITKASVSITFDNSD 87
Query: 101 TKE--------EHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQFLPQ 152
K+ + +T+ R++ ++++ NG V ++ + VNN + Q
Sbjct: 88 KKQSPLGFEVHDEITVTRQVVIGGRNKYLINGVNANNTRVQDLFCSVGLNVNNPHFLIMQ 147
Query: 153 DRVCEFAKLSPVKLL 167
R+ + + P + L
Sbjct: 148 GRITKVLNMKPPEFL 162
Score = 83 (34.3 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 52/243 (21%), Positives = 111/243 (45%)
Query: 643 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREME---NHINLRKRKLE--SIEKEDD 697
+Q E R+ E+E L++E + N + ++ +++ E +L + KL+ S K+ +
Sbjct: 662 VQDELRIKENELQALEEELAHLKNTAEKYRQLKQQWEMKTEEADLLQTKLQQSSYHKQQE 721
Query: 698 INTALAKLVDQAADL--NIQQFKYAIEIKNLLVEIVSCKWSYAEKHM----ASIEFD-AK 750
AL K+++++ + N ++ + E K ++E K + AE+ A + D AK
Sbjct: 722 ELDALKKIIEESEETLKNTKEIQKKAEEKYEVLEN-KMKNAEAERERELKDAQRKLDSAK 780
Query: 751 IRELEFNLKQHEKLA-LQA-SLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFL 808
+ + K EK ++A +L E+ K+E C + L E+I ++
Sbjct: 781 TKADASSKKMKEKQQEVEAITLELEELKREHASCEQQLEAVN---EAIKSYEGQIAVVAA 837
Query: 809 EMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLA 868
E+ E + A Q+ +++ + NI+ + + E K++ ++ +LK +
Sbjct: 838 EVAKNKESVNKA-QEEVTKQKEVITAQDNIV-----KAKYAEVAKHKEQNNEYQLK--IK 889
Query: 869 EID 871
E+D
Sbjct: 890 ELD 892
Score = 55 (24.4 bits), Expect = 1.2e-15, Sum P(4) = 1.2e-15
Identities = 16/45 (35%), Positives = 24/45 (53%)
Query: 209 QLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAEY 253
+LK E +K R+ E LE V+ +K+KL + +MKK Y
Sbjct: 415 ELKTKQTEVKKMDSGYRKDQEALEAVKKLKEKL---EAEMKKLNY 456
Score = 55 (24.4 bits), Expect = 1.2e-15, Sum P(4) = 1.2e-15
Identities = 15/61 (24%), Positives = 33/61 (54%)
Query: 375 SQILELGVQANQKRLQKSEKE---KILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGA 431
+ +L+ +Q + Q+ E + KI+ +++ TL+ + K E+K L + ++N+ A
Sbjct: 704 ADLLQTKLQQSSYHKQQEELDALKKIIEESEETLKNTKEIQKKAEEKYEVLENKMKNAEA 763
Query: 432 E 432
E
Sbjct: 764 E 764
Score = 55 (24.4 bits), Expect = 1.2e-15, Sum P(4) = 1.2e-15
Identities = 18/75 (24%), Positives = 40/75 (53%)
Query: 362 AYEPPHDKIEKLGSQILELGVQA--NQKRLQKSEKEKI-LNQNKLTLRQCSDRLKDMEDK 418
+Y ++++ L +I+E + N K +QK +EK + +NK+ + ++R ++++D
Sbjct: 715 SYHKQQEELDAL-KKIIEESEETLKNTKEIQKKAEEKYEVLENKMKNAE-AERERELKDA 772
Query: 419 NNKLLHALRNSGAEN 433
KL A + A +
Sbjct: 773 QRKLDSAKTKADASS 787
Score = 47 (21.6 bits), Expect = 8.7e-14, Sum P(3) = 8.7e-14
Identities = 15/54 (27%), Positives = 29/54 (53%)
Query: 386 QKRLQKS--EKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAENIFEA 437
+K L+K+ E K L + +++ +D L +++ +NK AL + A+ F A
Sbjct: 317 RKELEKNMVEDSKTLAAKEKEVKKITDGLNALQEASNKDAEAL--AAAQQHFNA 368
Score = 46 (21.3 bits), Expect = 4.6e-13, Sum P(4) = 4.6e-13
Identities = 14/53 (26%), Positives = 27/53 (50%)
Query: 496 KNLKPFDVPILNYVSNESSRKE-PFQISEEMRALGISAR-LDQVFDAPHAVKE 546
K+ FD+ N S E+ RKE + E+ + L + + ++ D +A++E
Sbjct: 298 KSQSAFDLKKKNLASEENKRKELEKNMVEDSKTLAAKEKEVKKITDGLNALQE 350
Score = 42 (19.8 bits), Expect = 2.3e-14, Sum P(4) = 2.3e-14
Identities = 15/37 (40%), Positives = 17/37 (45%)
Query: 186 LVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVE 222
+VE S L E VK+ D LN AL KD E
Sbjct: 324 MVEDSKTLAAKEKEVKKITDGLN---ALQEASNKDAE 357
Score = 42 (19.8 bits), Expect = 2.8e-13, Sum P(3) = 2.8e-13
Identities = 13/75 (17%), Positives = 32/75 (42%)
Query: 178 QLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESM 237
Q +Q + ++ +L ++ ++ + +TL K + + E+ E + + + E
Sbjct: 708 QTKLQQSSYHKQQEELDALKKIIEESEETLKNTKEIQKKAEEKYEVLENKMKNAEAERER 767
Query: 238 KKKLPWLKYDMKKAE 252
+ K K D K +
Sbjct: 768 ELKDAQRKLDSAKTK 782
Score = 41 (19.5 bits), Expect = 3.5e-13, Sum P(3) = 3.5e-13
Identities = 16/68 (23%), Positives = 32/68 (47%)
Query: 186 LVEKSSK-LKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWL 244
++E+S + LK + K+ + L+ N + + ER R+ + K++S K K
Sbjct: 729 IIEESEETLKNTKEIQKKAEEKYEVLE--NKMKNAEAERERELKDAQRKLDSAKTKADAS 786
Query: 245 KYDMKKAE 252
MK+ +
Sbjct: 787 SKKMKEKQ 794
Score = 39 (18.8 bits), Expect = 5.0e-08, Sum P(3) = 5.0e-08
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 426 LRNSGAENIFEAYCWL 441
L SG NI ++ C+L
Sbjct: 33 LNGSGKSNILDSICFL 48
Score = 38 (18.4 bits), Expect = 4.6e-13, Sum P(4) = 4.6e-13
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 404 TLRQCSDRLKDMEDKNNKL 422
T + ++ LK+M+DK KL
Sbjct: 241 TKERSAEELKEMQDKILKL 259
>DICTYBASE|DDB_G0284499 [details] [associations]
symbol:smc2 "structural maintenance of chromosome
protein" species:44689 "Dictyostelium discoideum" [GO:0051276
"chromosome organization" evidence=IEA] [GO:0030261 "chromosome
condensation" evidence=IEA] [GO:0007076 "mitotic chromosome
condensation" evidence=IEA;ISS] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0005694
"chromosome" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000796 "condensin complex" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISS] [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR024704
InterPro:IPR010935 InterPro:IPR027120 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
dictyBase:DDB_G0284499 Pfam:PF02463 GO:GO:0005524 GO:GO:0005634
GO:GO:0005694 GO:GO:0051301 GenomeReviews:CM000153_GR GO:GO:0006281
GO:GO:0006310 GO:GO:0007076 EMBL:AAFI02000066 GO:GO:0007062
eggNOG:COG1196 SUPFAM:SSF75553 KO:K06674 PANTHER:PTHR18937:SF9
HSSP:P32908 OMA:CQNGKIP RefSeq:XP_638528.1
ProteinModelPortal:Q54PK4 STRING:Q54PK4 PRIDE:Q54PK4
EnsemblProtists:DDB0219933 GeneID:8624621 KEGG:ddi:DDB_G0284499
ProtClustDB:CLSZ2430256 Uniprot:Q54PK4
Length = 1184
Score = 158 (60.7 bits), Expect = 1.3e-15, Sum P(3) = 1.3e-15
Identities = 82/349 (23%), Positives = 156/349 (44%)
Query: 650 IEDEAAKLQKEREEIINIVQIEKRKR---REMENHINLRKRKLESIEKEDDINTA-LAKL 705
++D K+Q +E+ I +I K ++ +++ I +LE++ KE N ++K+
Sbjct: 791 LKDLEKKIQITKEKCIKSNKIVKGEQVFIEKLDLEIQEMDNELENLSKETQGNQGTISKM 850
Query: 706 ---VDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHE 762
VD A + K +I+ L EI K MA + DA IR L L++ +
Sbjct: 851 RKDVDTLARSISETNKQIQDIRETLSEI--------RKDMAQ-KNDA-IRSLHQELEKIQ 900
Query: 763 KLALQASLHYEDCKKEVEHCRKHLSDAKRQAES-IAFIT-PELEKEFLEMPTTIEELEAA 820
+ + E K + K +A + E+ I T + EK+ P + + A
Sbjct: 901 SEITEIDMSTEKLKSRMNRVDKDRQEASKWLEAAIKKHTWIKNEKQLFNRPGSDFDFNAT 960
Query: 821 IQDNISQANSIFF------------LNQNILQEYEHRQRQIEDLSTKQ---EADKKELKR 865
+ S+ANS + +N+ ++ +E +++ ++L K+ E DK +++
Sbjct: 961 ---DPSKANSEYIKLQEEQEKLSKTINRKVMSMFEKAEQEYQELMEKKKIIENDKSKIEH 1017
Query: 866 FLAEIDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKF 925
+ E+D K + +LR ++N+ F F + L+ E + FG+ +KV F
Sbjct: 1018 VIRELDEKKNE---SLRTTWKKVNKDFGSIFSTLLPGTSAKLEPPEGQNELFGLEVKVAF 1074
Query: 926 RQSGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMD 974
+ E LS SGG++S+ + ++SL P ++DEI+ +D
Sbjct: 1075 GDVWK-ETLS--ELSGGQKSLLALSLILSLLLFKPAPMYILDEIDAALD 1120
Score = 129 (50.5 bits), Expect = 1.3e-15, Sum P(3) = 1.3e-15
Identities = 71/302 (23%), Positives = 129/302 (42%)
Query: 46 NLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSIGAYVKRGEESGYIKISL-----RGD 100
N + G NGSGKS+++ +I LG R S+ V + ++G K S+ D
Sbjct: 28 NAITGLNGSGKSNILDSICFVLGISNLSQVRVDSLQELVYKKGQAGITKASVTITFNNSD 87
Query: 101 TKE-----EHL---TIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQFLPQ 152
K+ EHL T+ R++ ++++ NG V ++ + VNN + Q
Sbjct: 88 KKQSPAGYEHLDKITVTRQVAIGGRNKYLINGHNAQLSRVQDLFHSVQLNVNNPHFLIMQ 147
Query: 153 DRVCEFAKLSPVKLLEETEKAVGDPQLPVQ-HCAL--VEKSSKLKTIECT---VKRNGDT 206
R+ + + P ++L E+A G ++ + AL +EK K K E T + T
Sbjct: 148 GRITKVLNMKPPEILAMIEEAAGTRMFEMKKNSALNTIEKKQK-KVDEITKVLAEEITPT 206
Query: 207 LNQLKALNVEQEKD------VERVRQRAELLEKVESMKKKLPWLKYDMKKAEYIXXXXXX 260
L++L+ K ++R+ QR + + + +KKL +++ KAE
Sbjct: 207 LDKLRGERTSYMKFTNNQTLIDRL-QRFIIAYEYYTYEKKLESSEFESFKAEIDKGQKRK 265
Query: 261 XXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSS-LINENS--KRRMDFLEKVD 317
+ E +K E K+ +D +KLS L+ + K + + L+K +
Sbjct: 266 KDLTLKSTDLKAKISELAKQRE-KETNLEEMDQQEQKLSKELVKYQTSHKHQKESLDK-E 323
Query: 318 QG 319
+G
Sbjct: 324 EG 325
Score = 85 (35.0 bits), Expect = 6.7e-10, Sum P(4) = 6.7e-10
Identities = 44/232 (18%), Positives = 100/232 (43%)
Query: 682 INLRKRKLESIEKE-DDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEK 740
+N R L + + + IN L +L D +Q + + IK +++ ++
Sbjct: 681 LNENNRCLRENQSQLEHINFELVQL-KSVTD-RFKQLEQQLNIKQHAASLIAQRFQLNPH 738
Query: 741 HMASIEFDAKIRELEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFIT 800
H +E I+E+E +++ +L + + ++ ++V+ ++D + ES
Sbjct: 739 HQL-LE---SIKEMEKSIESDTQLITNSMIKEKEALEKVKQLESQVNDFQSIRESQL--- 791
Query: 801 PELEKEFLEMPTTIEELEAAIQDN-ISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEAD 859
+LEK+ I + E I+ N I + +F ++ E + ++E+LS + + +
Sbjct: 792 KDLEKKI-----QITK-EKCIKSNKIVKGEQVFIEKLDL--EIQEMDNELENLSKETQGN 843
Query: 860 KKELKRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHE 911
+ + + ++D L T + + I ET S ++MA + H+
Sbjct: 844 QGTISKMRKDVDTLARSISETNKQ-IQDIRETLSEIRKDMAQKNDAIRSLHQ 894
Score = 85 (35.0 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 55/245 (22%), Positives = 121/245 (49%)
Query: 650 IEDEAAKLQKEREEIINIVQIEKRKRR---EMENHINLRKRKLESIEKEDDINTALAKLV 706
++ + ++L K+RE+ N+ ++++++++ E+ + K + ES++KE+ LA
Sbjct: 275 LKAKISELAKQREKETNLEEMDQQEQKLSKELVKYQTSHKHQKESLDKEEGAINNLANTR 334
Query: 707 DQAADLNIQQF---KYAIE--IKNLLVEI--VSCKWSYAE-KHMA-----SIEFD----A 749
++ +IQQ K ++E I++++ E ++ + + KH S D A
Sbjct: 335 EEIKQ-SIQQKQKEKQSMEKKIQSIVEENQQINAELKTLQNKHNTMTTGISTGADGSSAA 393
Query: 750 KIRELEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLE 809
+ L + +K A+ A+ Y+ + V+H + L AKR+A IT E + + +
Sbjct: 394 EDGSYTEQLMEAKKTAVNAASEYKQAEFRVKHLQSELI-AKRKA-----ITQE-QTDHKK 446
Query: 810 MPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAE 869
+ E +E IQ ++++ L+ + QE ++RQ+E L +K ++E+ A+
Sbjct: 447 LQAEQELVEREIQQ-LTRSIQELQLDNSKQQELTEKKRQLEPLVSKL---REEVGNASAQ 502
Query: 870 IDALK 874
+ L+
Sbjct: 503 LSGLE 507
Score = 76 (31.8 bits), Expect = 3.3e-07, Sum P(3) = 3.3e-07
Identities = 40/224 (17%), Positives = 93/224 (41%)
Query: 673 RKRREMENHINLRKRKLESI-------EKEDDINTALAKLVDQAADLNIQQFKYAIEIKN 725
R+ + HIN +L+S+ E++ +I A L+ Q LN + IK
Sbjct: 689 RENQSQLEHINFELVQLKSVTDRFKQLEQQLNIKQHAASLIAQRFQLN-PHHQLLESIKE 747
Query: 726 LLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYEDCKKEVEHCRKH 785
+ I S + E K+++LE + + + ++ L +D +K+++ ++
Sbjct: 748 MEKSIESDTQLITNSMIKEKEALEKVKQLESQVNDFQSIR-ESQL--KDLEKKIQITKEK 804
Query: 786 LSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHR 845
+ + + +L+ E EM +E L Q N + + + +
Sbjct: 805 CIKSNKIVKGEQVFIEKLDLEIQEMDNELENLSKETQGNQGTISKMRKDVDTLARSISET 864
Query: 846 QRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLVAQIN 889
+QI+D+ +K++ + I +L ++ L +++ + +I+
Sbjct: 865 NKQIQDIRETLSEIRKDMAQKNDAIRSLHQE-LEKIQSEITEID 907
Score = 63 (27.2 bits), Expect = 2.0e-08, Sum P(3) = 2.0e-08
Identities = 28/110 (25%), Positives = 48/110 (43%)
Query: 201 KRNGD-TLNQ--LKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAEYIXXX 257
KR D TL LKA E K E+ E+ ++ + + K+L +KY + +
Sbjct: 263 KRKKDLTLKSTDLKAKISELAKQREKETNLEEMDQQEQKLSKEL--VKY---QTSHKHQK 317
Query: 258 XXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENSK 307
NT E + I+ K++EK ++ KK+ S++ EN +
Sbjct: 318 ESLDKEEGAINNLANTREEIKQSIQQKQKEKQSME---KKIQSIVEENQQ 364
Score = 62 (26.9 bits), Expect = 6.7e-10, Sum P(4) = 6.7e-10
Identities = 18/65 (27%), Positives = 37/65 (56%)
Query: 643 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKE--DDINT 700
+Q EQ L+E E +L + +E+ Q++ K++E+ +KR+LE + + +++
Sbjct: 447 LQAEQELVEREIQQLTRSIQEL----QLDNSKQQELTE----KKRQLEPLVSKLREEVGN 498
Query: 701 ALAKL 705
A A+L
Sbjct: 499 ASAQL 503
Score = 54 (24.1 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 12/57 (21%), Positives = 33/57 (57%)
Query: 368 DKIEK-LGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLL 423
+K+ K + +++ + +A Q+ + EK+KI+ +K + ++++++K N+ L
Sbjct: 977 EKLSKTINRKVMSMFEKAEQEYQELMEKKKIIENDKSKIEHV---IRELDEKKNESL 1030
Score = 53 (23.7 bits), Expect = 1.3e-15, Sum P(3) = 1.3e-15
Identities = 15/57 (26%), Positives = 32/57 (56%)
Query: 378 LELGVQANQKRLQKSEK--EKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAE 432
++ +Q QK Q EK + I+ +N+ Q + LK +++K+N + + ++GA+
Sbjct: 337 IKQSIQQKQKEKQSMEKKIQSIVEENQ----QINAELKTLQNKHNTMTTGI-STGAD 388
Score = 51 (23.0 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 20/70 (28%), Positives = 34/70 (48%)
Query: 368 DKIEKLGSQI----LELGVQANQKRLQKSEKEKILNQNKLT-LRQCSDRLKDMEDKNNKL 422
+KI K G Q+ L+L +Q L+ KE NQ ++ +R+ D L + NK
Sbjct: 809 NKIVK-GEQVFIEKLDLEIQEMDNELENLSKETQGNQGTISKMRKDVDTLARSISETNKQ 867
Query: 423 LHALRNSGAE 432
+ +R + +E
Sbjct: 868 IQDIRETLSE 877
Score = 48 (22.0 bits), Expect = 4.1e-15, Sum P(3) = 4.1e-15
Identities = 16/51 (31%), Positives = 24/51 (47%)
Query: 375 SQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHA 425
+QI L R +S+ E I N + L+ +DR K +E + N HA
Sbjct: 676 TQIQRLNENNRCLRENQSQLEHI-NFELVQLKSVTDRFKQLEQQLNIKQHA 725
Score = 41 (19.5 bits), Expect = 3.1e-06, Sum P(3) = 3.1e-06
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 38 ICKPGSRLNLVIGPNGSGKSSL 59
IC G N+VI + +GK+ L
Sbjct: 543 ICASGKLYNIVIEDDETGKALL 564
Score = 37 (18.1 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 7/25 (28%), Positives = 12/25 (48%)
Query: 417 DKNNKLLHALRNSGAENIFEAYCWL 441
D + L SG NI ++ C++
Sbjct: 24 DPTFNAITGLNGSGKSNILDSICFV 48
>UNIPROTKB|E2R7R8 [details] [associations]
symbol:SMC2 "Structural maintenance of chromosomes protein"
species:9615 "Canis lupus familiaris" [GO:0051383 "kinetochore
organization" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0045132 "meiotic chromosome
segregation" evidence=IEA] [GO:0010032 "meiotic chromosome
condensation" evidence=IEA] [GO:0007076 "mitotic chromosome
condensation" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0000796 "condensin complex" evidence=IEA] [GO:0000228 "nuclear
chromosome" evidence=IEA] [GO:0007062 "sister chromatid cohesion"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR024704 InterPro:IPR010935
InterPro:IPR027120 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0005737
GO:GO:0006281 GO:GO:0006310 GO:GO:0007076 GO:GO:0000228
GO:GO:0000796 GO:GO:0007062 SUPFAM:SSF75553
GeneTree:ENSGT00550000074857 PANTHER:PTHR18937:SF9 OMA:CQNGKIP
EMBL:AAEX03008008 Ensembl:ENSCAFT00000004208 Uniprot:E2R7R8
Length = 1191
Score = 156 (60.0 bits), Expect = 1.3e-15, Sum P(4) = 1.3e-15
Identities = 69/341 (20%), Positives = 146/341 (42%)
Query: 652 DEAAKLQKEREEIINIVQIEKRK-RREMENHINLRKRKLESIEK-EDDINTALAKLVDQA 709
D ++K KE+++ + + +E + +RE ++ + E+I+ E I ++
Sbjct: 806 DASSKKMKEKQQEVEAITLELEELKREHTSYKQQLEAVNEAIKSYEVQIEAMAVEVAKNK 865
Query: 710 ADLNIQQFKYAIEIKNLLVE--IVSCKWSYAEKHMA-SIEFDAKIRELEFNLKQHEKLAL 766
+N Q + + + ++ + ++ K++ H + + KI+EL+ N+ +H++ A
Sbjct: 866 ESVNKAQEEVTKQKEVIIAQDNVIKAKYAEVAVHKEQNNDSQLKIKELDHNISKHKREAE 925
Query: 767 QASLHYEDCKKEVE--HCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDN 824
A+ K+ + + KHL A P KE + ++E++ + N
Sbjct: 926 DAASKVSKMLKDYDWINAEKHLFGQPNSAYDFKTNNP---KEAGQRLQKLQEMKEKLGRN 982
Query: 825 ISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNL 884
++ N+L E E R DL K+ + + + LA I+ L +K L
Sbjct: 983 VNMRA------MNVLTEAEERYN---DLMKKKRIVENDKSKILATIEDLDQKKNQALNIA 1033
Query: 885 VAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVLSAHHQSGGER 944
++N+ F F + L E G+ KV + + E L+ SGG+R
Sbjct: 1034 WQKVNKDFGSIFSTLLPGANAMLAPPEGQTVLDGLEFKVALGNTWK-ENLT--ELSGGQR 1090
Query: 945 SVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQL 985
S+ + ++S+ P ++DE++ +D + + + Q L
Sbjct: 1091 SLVALSLILSMLLFKPAPIYILDEVDAALDLSHTQNIGQML 1131
Score = 124 (48.7 bits), Expect = 1.3e-15, Sum P(4) = 1.3e-15
Identities = 43/184 (23%), Positives = 84/184 (45%)
Query: 46 NLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSIGAYVKRGEESGYIKISL-----RGD 100
N + G NGSGKS+++ +I LG RA+++ V + ++G K S+ D
Sbjct: 28 NAITGLNGSGKSNILDSICFLLGISNLSQVRASNLQDLVYKNGQAGITKASVSITFDNSD 87
Query: 101 TKE--------EHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQFLPQ 152
K+ + +T+ R++ ++++ NG V ++ + VNN + Q
Sbjct: 88 KKQSPLGFEVHDEITVTRQVVIGGRNKYLINGVNANNSRVQDLFCSVGLNVNNPHFLIMQ 147
Query: 153 DRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCA----LVEKSSKLKTIECTVKRN-GDTL 207
R+ + + P ++L E+A G + A + +K +KLK I+ ++ T+
Sbjct: 148 GRITKVLNMKPPEILSMIEEAAGTRMYEYKKIAAQKTIEKKEAKLKEIKTILEEEITPTI 207
Query: 208 NQLK 211
+LK
Sbjct: 208 QKLK 211
Score = 64 (27.6 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 46/237 (19%), Positives = 93/237 (39%)
Query: 643 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTAL 702
+Q E R+ E+E L +E + N + K R+++ ++ E+ D + T L
Sbjct: 684 VQDELRIKENELQSLDEELAGLKNTAE----KYRQLKQQWEMKT------EEADLLQTKL 733
Query: 703 AKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHE 762
+ + K IE ++ AE+ +E K E E + E
Sbjct: 734 QQSSYHKQQEELDALKKTIEESEETLKNTKEIQKKAEEKYEVLENKMKNAEAE---RDRE 790
Query: 763 KLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQ 822
Q L + K + + K + + +++ E+I EL++E +E + AI+
Sbjct: 791 LKDAQKKLDF--AKTKADASSKKMKEKQQEVEAITLELEELKREHTSYKQQLEAVNEAIK 848
Query: 823 DNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQE---ADKKELKRFLAEIDALKEK 876
Q ++ + + E + E+++ ++E A +K AE+ KE+
Sbjct: 849 SYEVQIEAMAV---EVAKNKESVNKAQEEVTKQKEVIIAQDNVIKAKYAEVAVHKEQ 902
Score = 62 (26.9 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 60/253 (23%), Positives = 116/253 (45%)
Query: 649 LIEDEAAKLQKEREEIIN-IVQIEKRKRREMENHINLRKRKLESIEKEDD--INTALAKL 705
L ED + +E +E+ + +V++++ K E + I ++E +EK D I L L
Sbjct: 241 LAEDTKERSAEELKEMQDKVVKLQE-KLSENDKKIKALSHEIEELEKGKDKEIGGKLRSL 299
Query: 706 VDQAAD---LNIQ-QFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQH 761
D A+ +N + Q + ++ KNL E K + EK+M IE D+ R L K+
Sbjct: 300 EDALAEAQRVNTKSQSAFDLKKKNLASE--ENKRTELEKNM--IE-DS--RTLAAKEKEV 352
Query: 762 EKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAI 821
+K+ + E K+ E L+ A++ +++ E + E T+ A
Sbjct: 353 KKITDGLNALQEASNKDAEA----LAAAQQHFNAVSAGLSSNE-DGAE--ATLAGQMMAC 405
Query: 822 QDNISQANSIFFLNQNIL----QEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKW 877
+++IS+A + Q L QE + +Q +++ + + D++ L+ + LKEK
Sbjct: 406 KNDISKAQTEAKQAQMKLKHAQQELKTKQAEVKKMDSGYRKDQEALEA----VKKLKEKL 461
Query: 878 LPTLRNLVAQINE 890
++ L + N+
Sbjct: 462 EAEMKKLNYEENK 474
Score = 62 (26.9 bits), Expect = 0.00020, Sum P(4) = 0.00020
Identities = 47/168 (27%), Positives = 76/168 (45%)
Query: 644 QTEQRLIEDEAAKLQKERE--EI---INIVQIEKRKRREM----ENHINLRKRKLESIEK 694
+ E+ +IED KE+E +I +N +Q K E + H N L S
Sbjct: 333 ELEKNMIEDSRTLAAKEKEVKKITDGLNALQEASNKDAEALAAAQQHFNAVSAGLSS--N 390
Query: 695 EDDINTALA-KLVDQAADLNIQQF--KYA-IEIKNLLVEIVSCKWSYAEKHMASIEFDAK 750
ED LA +++ D++ Q K A +++K+ E+ + K + +K + D +
Sbjct: 391 EDGAEATLAGQMMACKNDISKAQTEAKQAQMKLKHAQQELKT-KQAEVKKMDSGYRKDQE 449
Query: 751 IRELEFNLKQHEKL-ALQASLHYEDCKKE-VEHCRKHLS-DAKRQAES 795
E LK EKL A L+YE+ K+E + R+ LS D R E+
Sbjct: 450 ALEAVKKLK--EKLEAEMKKLNYEENKEEGLLEKRRQLSRDISRLKET 495
Score = 59 (25.8 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 30/115 (26%), Positives = 52/115 (45%)
Query: 804 EKEFLEMPTTIEE-LEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKE 862
E + E+ T +EE + IQ + + S + Q I++E EH R D KE
Sbjct: 189 EAKLKEIKTILEEEITPTIQ-KLKEERSSYLEYQKIMREIEHLSRLYIAYQFLLAEDTKE 247
Query: 863 LKRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEM-AVAGEVSLDEHESDFDK 916
R E+ +++K V ++ E S N +++ A++ E+ +E E DK
Sbjct: 248 --RSAEELKEMQDK--------VVKLQEKLSENDKKIKALSHEI--EELEKGKDK 290
Score = 57 (25.1 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 42/208 (20%), Positives = 92/208 (44%)
Query: 674 KRREMENHINLRKRKLESIEK--EDDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIV 731
K+ + I ++ KL+ I+ E++I + KL ++ + ++ K EI++L +
Sbjct: 177 KKIAAQKTIEKKEAKLKEIKTILEEEITPTIQKLKEERSSY-LEYQKIMREIEHLSRLYI 235
Query: 732 SCKWSYAE--KHMASIEFDA---KIRELEFNLKQHEKLALQASLHYEDCKK----EVEHC 782
+ ++ AE K ++ E K+ +L+ L +++K S E+ +K E+
Sbjct: 236 AYQFLLAEDTKERSAEELKEMQDKVVKLQEKLSENDKKIKALSHEIEELEKGKDKEIGGK 295
Query: 783 RKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNI-SQANSIFFLNQNILQE 841
+ L DA +A+ + + + F +++ A ++N ++ + L
Sbjct: 296 LRSLEDALAEAQRV---NTKSQSAF-----DLKKKNLASEENKRTELEKNMIEDSRTLAA 347
Query: 842 YEHRQRQIED-LSTKQEADKKELKRFLA 868
E ++I D L+ QEA K+ + A
Sbjct: 348 KEKEVKKITDGLNALQEASNKDAEALAA 375
Score = 55 (24.4 bits), Expect = 1.3e-15, Sum P(4) = 1.3e-15
Identities = 16/45 (35%), Positives = 24/45 (53%)
Query: 209 QLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAEY 253
+LK E +K R+ E LE V+ +K+KL + +MKK Y
Sbjct: 429 ELKTKQAEVKKMDSGYRKDQEALEAVKKLKEKL---EAEMKKLNY 470
Score = 55 (24.4 bits), Expect = 8.3e-05, Sum P(3) = 8.3e-05
Identities = 34/140 (24%), Positives = 65/140 (46%)
Query: 362 AYEPPHDKIEKLGSQILELG-VQANQKRLQKSEKEKI-LNQNKLTLRQCSDRLKDMEDKN 419
+Y ++++ L I E N K +QK +EK + +NK+ + ++R ++++D
Sbjct: 737 SYHKQQEELDALKKTIEESEETLKNTKEIQKKAEEKYEVLENKMKNAE-AERDRELKDAQ 795
Query: 420 NKLLHALRNSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLE--DHVGH 477
KL A + A + +++ + E+ EA + LE+ R H +Y + + V
Sbjct: 796 KKLDFAKTKADASSKK-----MKEKQQEV--EA---ITLELEELKREHTSYKQQLEAVNE 845
Query: 478 YIWKSFITQDAGDRDFLAKN 497
I KS+ Q +AKN
Sbjct: 846 AI-KSYEVQIEAMAVEVAKN 864
Score = 50 (22.7 bits), Expect = 1.3e-15, Sum P(4) = 1.3e-15
Identities = 14/61 (22%), Positives = 32/61 (52%)
Query: 375 SQILELGVQANQKRLQKSEKE---KILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGA 431
+ +L+ +Q + Q+ E + K + +++ TL+ + K E+K L + ++N+ A
Sbjct: 726 ADLLQTKLQQSSYHKQQEELDALKKTIEESEETLKNTKEIQKKAEEKYEVLENKMKNAEA 785
Query: 432 E 432
E
Sbjct: 786 E 786
Score = 49 (22.3 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 15/73 (20%), Positives = 36/73 (49%)
Query: 178 QLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQR-----AELLE 232
Q +Q + ++ +L ++ T++ + +TL K + + E+ E + + AE
Sbjct: 730 QTKLQQSSYHKQQEELDALKKTIEESEETLKNTKEIQKKAEEKYEVLENKMKNAEAERDR 789
Query: 233 KVESMKKKLPWLK 245
+++ +KKL + K
Sbjct: 790 ELKDAQKKLDFAK 802
Score = 48 (22.0 bits), Expect = 0.00020, Sum P(4) = 0.00020
Identities = 33/186 (17%), Positives = 73/186 (39%)
Query: 803 LEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKE 862
L++E + T E+ Q + L + Q H+Q++ D K + +E
Sbjct: 698 LDEELAGLKNTAEKYRQLKQQWEMKTEEADLLQTKLQQSSYHKQQEELDALKKTIEESEE 757
Query: 863 LKRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIK 922
+ EI E+ L N + R ++ + LD ++ D +K
Sbjct: 758 TLKNTKEIQKKAEEKYEVLENKMKNAEAERDRELKD----AQKKLDFAKTKADASSKKMK 813
Query: 923 VKFRQ----SGQLEVLSAHHQSGGER--SVSTIL--YLVSLQDLTNCPFRVVDEINQGMD 974
K ++ + +LE L H S ++ +V+ + Y V ++ + + + +N+ +
Sbjct: 814 EKQQEVEAITLELEELKREHTSYKQQLEAVNEAIKSYEVQIEAMAVEVAKNKESVNKAQE 873
Query: 975 PINERK 980
+ ++K
Sbjct: 874 EVTKQK 879
Score = 45 (20.9 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 22/98 (22%), Positives = 45/98 (45%)
Query: 159 AKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQE 218
AKL +K + E E +L + + +E ++ IE + R L A + + E
Sbjct: 190 AKLKEIKTILEEEITPTIQKLKEERSSYLEYQKIMREIE-HLSRLYIAYQFLLAEDTK-E 247
Query: 219 KDVERVRQRAE----LLEKVESMKKKLPWLKYDMKKAE 252
+ E +++ + L EK+ KK+ L +++++ E
Sbjct: 248 RSAEELKEMQDKVVKLQEKLSENDKKIKALSHEIEELE 285
Score = 43 (20.2 bits), Expect = 2.7e-13, Sum P(4) = 2.7e-13
Identities = 14/53 (26%), Positives = 26/53 (49%)
Query: 496 KNLKPFDVPILNYVSNESSRKE-PFQISEEMRALGISAR-LDQVFDAPHAVKE 546
K+ FD+ N S E+ R E + E+ R L + + ++ D +A++E
Sbjct: 312 KSQSAFDLKKKNLASEENKRTELEKNMIEDSRTLAAKEKEVKKITDGLNALQE 364
Score = 41 (19.5 bits), Expect = 1.1e-13, Sum P(3) = 1.1e-13
Identities = 15/61 (24%), Positives = 32/61 (52%)
Query: 380 LGVQANQK-RLQKS--EKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAENIFE 436
L + N++ L+K+ E + L + +++ +D L +++ +NK AL + A+ F
Sbjct: 324 LASEENKRTELEKNMIEDSRTLAAKEKEVKKITDGLNALQEASNKDAEAL--AAAQQHFN 381
Query: 437 A 437
A
Sbjct: 382 A 382
Score = 40 (19.1 bits), Expect = 4.1e-06, Sum P(3) = 4.1e-06
Identities = 14/37 (37%), Positives = 17/37 (45%)
Query: 186 LVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVE 222
++E S L E VK+ D LN AL KD E
Sbjct: 338 MIEDSRTLAAKEKEVKKITDGLN---ALQEASNKDAE 371
Score = 39 (18.8 bits), Expect = 2.7e-13, Sum P(4) = 2.7e-13
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 404 TLRQCSDRLKDMEDKNNKLLHAL 426
T + ++ LK+M+DK KL L
Sbjct: 245 TKERSAEELKEMQDKVVKLQEKL 267
Score = 39 (18.8 bits), Expect = 2.5e-05, Sum P(3) = 2.5e-05
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 426 LRNSGAENIFEAYCWL 441
L SG NI ++ C+L
Sbjct: 33 LNGSGKSNILDSICFL 48
>MGI|MGI:106067 [details] [associations]
symbol:Smc2 "structural maintenance of chromosomes 2"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000228 "nuclear chromosome" evidence=ISO]
[GO:0000793 "condensed chromosome" evidence=ISO;IDA] [GO:0000796
"condensin complex" evidence=ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005694 "chromosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007076 "mitotic chromosome condensation"
evidence=ISO] [GO:0010032 "meiotic chromosome condensation"
evidence=IMP] [GO:0030261 "chromosome condensation" evidence=IEA]
[GO:0045132 "meiotic chromosome segregation" evidence=IMP]
[GO:0046982 "protein heterodimerization activity" evidence=ISO]
[GO:0051276 "chromosome organization" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0051383 "kinetochore
organization" evidence=IMP] InterPro:IPR024704 InterPro:IPR010935
InterPro:IPR027120 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 MGI:MGI:106067 GO:GO:0005524
GO:GO:0005737 GO:GO:0051301 GO:GO:0006281 EMBL:CH466565
GO:GO:0006310 GO:GO:0045132 GO:GO:0000793 GO:GO:0007076
GO:GO:0051383 GO:GO:0000228 GO:GO:0000796 GO:GO:0010032
GO:GO:0007062 eggNOG:COG1196 SUPFAM:SSF75553
GeneTree:ENSGT00550000074857 KO:K06674 PANTHER:PTHR18937:SF9
OMA:CQNGKIP CTD:10592 HOVERGEN:HBG106605 OrthoDB:EOG49S65K
EMBL:AJ534939 EMBL:AK013109 EMBL:AK019977 EMBL:AL732619
EMBL:BC094380 EMBL:U42385 IPI:IPI00987134 RefSeq:NP_032043.3
UniGene:Mm.2999 PDB:3L51 PDBsum:3L51 ProteinModelPortal:Q8CG48
SMR:Q8CG48 IntAct:Q8CG48 STRING:Q8CG48 PhosphoSite:Q8CG48
PaxDb:Q8CG48 PRIDE:Q8CG48 Ensembl:ENSMUST00000102915
Ensembl:ENSMUST00000117280 GeneID:14211 KEGG:mmu:14211
InParanoid:Q52KE9 EvolutionaryTrace:Q8CG48 NextBio:285461
Bgee:Q8CG48 CleanEx:MM_SMC2 Genevestigator:Q8CG48
GermOnline:ENSMUSG00000028312 Uniprot:Q8CG48
Length = 1191
Score = 154 (59.3 bits), Expect = 2.7e-15, Sum P(3) = 2.7e-15
Identities = 74/343 (21%), Positives = 146/343 (42%)
Query: 652 DEAAKLQKEREEIINIV--QIEKRKRREMENHINLRKRKLESIEK-EDDINTALAKLVDQ 708
D ++K KE+++ + + ++E+ KR N L E+I+ E I A++
Sbjct: 806 DASSKKMKEKQQEVEAITLELEELKREHASNEQQLDAVN-EAIKAYEGQIEKMAAEVAKN 864
Query: 709 AADLNIQQFKYAIEIKNLLV---EIVSCKWSYAEKH-MASIEFDAKIRELEFNLKQHEKL 764
+N Q + ++ K ++ I+ K + KH + + E KI+EL+ ++ +H++
Sbjct: 865 KESVNKAQDEL-MKQKQIITAQDNIIKDKCAEVAKHNLQNNESQLKIKELDHSISKHKRE 923
Query: 765 ALQASLHYEDCKKEVE--HCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQ 822
A A+ + + + KHL A P KE + ++E++ +
Sbjct: 924 ADDAAAKVSKMLSDYDWINAEKHLFGQPNSAYDFKTNNP---KEAGQRLQKLQEVKEKLG 980
Query: 823 DNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLR 882
N++ N+L E E R DL K+ + + + LA I+ L +K L
Sbjct: 981 RNVN------LRAMNVLTEAEERYN---DLMKKKRIVENDKSKILATIEDLDQKKNQALN 1031
Query: 883 NLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVLSAHHQSGG 942
++N+ F F + L E G+ KV + + E L+ SGG
Sbjct: 1032 IAWQKVNKDFGSIFSTLLPGANAMLAPPEGQTVLDGLEFKVALGNTWK-ENLT--ELSGG 1088
Query: 943 ERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQL 985
+RS+ + ++S+ P ++DE++ +D + + + Q L
Sbjct: 1089 QRSLVALSLILSMLLFKPAPIYILDEVDAALDLSHTQNIGQML 1131
Score = 123 (48.4 bits), Expect = 2.7e-15, Sum P(3) = 2.7e-15
Identities = 45/184 (24%), Positives = 84/184 (45%)
Query: 46 NLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSIGAYVKRGEESGYIKISL-----RGD 100
N + G NGSGKS+++ +I LG RA+++ V + ++G K S+ D
Sbjct: 28 NAITGLNGSGKSNILDSICFLLGISNLSQVRASNLQDLVYKNGQAGITKASVSITFDNSD 87
Query: 101 TK------EEH--LTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQFLPQ 152
K E H +T+ R++ ++++ NG V ++ + VNN + Q
Sbjct: 88 KKQSPLGFEAHDEITVTRQVVIGGRNKYLINGVNANNTRVQDLFCSVGLNVNNPHFLIMQ 147
Query: 153 DRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCA----LVEKSSKLKTIECTVKRN-GDTL 207
R+ + + P ++L E+A G + A + +K +KLK I+ ++ T+
Sbjct: 148 GRITKVLNMKPPEILSMIEEAAGTRMYEYKKIAAQKTIEKKEAKLKEIKTILEEEITPTI 207
Query: 208 NQLK 211
+LK
Sbjct: 208 QKLK 211
Score = 101 (40.6 bits), Expect = 8.6e-10, Sum P(3) = 8.6e-10
Identities = 51/235 (21%), Positives = 108/235 (45%)
Query: 676 REMENHINLRKRKLESIEKEDDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKW 735
+++++ + ++ +L ++E+E LA L + A +Q K E+K +++ K
Sbjct: 682 KDVQDELRTKENELRALEEE------LAGLKNVAE--KYRQLKQQWEMKTEEGDLLQTKL 733
Query: 736 SYAEKHMASIEFDA---KIRELEFNLKQHEKLALQASLHYEDCKKEVEHCR----KHLSD 788
+ H E DA I E E LK +++ +A YE + ++++ K L D
Sbjct: 734 QQSSYHKQQEELDALKKTIEESEETLKSTKEIQKKAEEKYEALENKMKNAEAEREKELKD 793
Query: 789 AKRQAESIAFITPELEKEFLEMPTTIE----ELEAAIQDNISQANSIFFLNQNILQEYEH 844
A+++ + K+ E +E ELE +++ S + +N+ I + YE
Sbjct: 794 AQKKLDCAKTKADASSKKMKEKQQEVEAITLELEELKREHASNEQQLDAVNEAI-KAYEG 852
Query: 845 RQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLR-NLVA-QINETFSRNFQ 897
QIE ++ + +K+ + + A+ + +K+K + T + N++ + E N Q
Sbjct: 853 ---QIEKMAAEVAKNKESVNK--AQDELMKQKQIITAQDNIIKDKCAEVAKHNLQ 902
Score = 81 (33.6 bits), Expect = 8.8e-08, Sum P(3) = 8.8e-08
Identities = 52/215 (24%), Positives = 97/215 (45%)
Query: 643 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHI---NLRKRKLE--SIEKEDD 697
+Q E R E+E L++E + N+ + ++ +++ E +L + KL+ S K+ +
Sbjct: 684 VQDELRTKENELRALEEELAGLKNVAEKYRQLKQQWEMKTEEGDLLQTKLQQSSYHKQQE 743
Query: 698 INTALAKLVDQAADL-----NIQ---QFKY-AIE--IKNLLVEIVSCKWSYAEKHMASIE 746
AL K ++++ + IQ + KY A+E +KN E + A+K + +
Sbjct: 744 ELDALKKTIEESEETLKSTKEIQKKAEEKYEALENKMKNAEAEREK-ELKDAQKKLDCAK 802
Query: 747 FDAKIRELEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKE 806
A + KQ E A+ +L E+ K+E + L DA +A I ++EK
Sbjct: 803 TKADASSKKMKEKQQEVEAI--TLELEELKREHASNEQQL-DAVNEA--IKAYEGQIEKM 857
Query: 807 FLEMPTTIEELEAAIQDNISQANSIFFLNQNILQE 841
E+ E + A QD + + I NI+++
Sbjct: 858 AAEVAKNKESVNKA-QDELMKQKQIITAQDNIIKD 891
Score = 63 (27.2 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 61/256 (23%), Positives = 109/256 (42%)
Query: 651 EDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTA--LAKLVDQ 708
E A +L++ +++I+N+ ++ E E I ++E +E+ D T L L D
Sbjct: 247 ERSAGELKEMQDKIVNLQEVLS----ENEKKIKALNCEIEELERRKDKETGGKLKSLEDA 302
Query: 709 AAD---LNIQ-QFKYAIEIKNLLVEIVSCKW---SYAE--KHMASIEFDAK-----IREL 754
A+ +N + Q + ++ KNL E K S AE K +A+ E + K + L
Sbjct: 303 CAEAQRVNTKSQSAFDLKKKNLASEETKRKELQNSMAEDSKALAAKEKEVKKITDGLHGL 362
Query: 755 -EFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTT 813
E + K E LA A H+ + + ++A + IA ++ K E
Sbjct: 363 QEASNKDAEALAA-AQQHFNAVSAGLSS-NEDGAEATLAGQMIA-CKNDISKAQTEAKQA 419
Query: 814 IEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDAL 873
+L+ A Q+ S+ + ++ Y+ Q E + +E + E+K+ E +
Sbjct: 420 QMKLKHAQQELKSKQAEVKKMDSG----YKKDQDAFEAVKKAKEKLETEMKKLNYE-ENK 474
Query: 874 KEKWLPTLRNLVAQIN 889
+EK L R L IN
Sbjct: 475 EEKLLEKHRQLSRDIN 490
Score = 60 (26.2 bits), Expect = 2.7e-15, Sum P(3) = 2.7e-15
Identities = 30/165 (18%), Positives = 68/165 (41%)
Query: 363 YEPPHDKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKL 422
Y+ D E + +L + + +++++EK+L ++ RQ S + +++ K+ L
Sbjct: 444 YKKDQDAFEAVKKAKEKLETEMKKLNYEENKEEKLLEKH----RQLSRDINNLKGKHEAL 499
Query: 423 LHALRNSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLEDHVGHYIWKS 482
L N + + ++ G V +NV + + A LE G ++
Sbjct: 500 LAKFPNL-------QFAYKDPEKNWNRNSVKGLVASLINVKDNSTATALEVVAGERLYNV 552
Query: 483 FITQDAGDRDFLAKN-LKP-FDVPILNYVSNESSRKEPFQISEEM 525
+ + + L K LK + + LN +S E ++++ +
Sbjct: 553 VVDTEVTAKKLLEKGELKRRYTIIPLNKISARCIAPETLRVAQNL 597
Score = 59 (25.8 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 22/88 (25%), Positives = 43/88 (48%)
Query: 804 EKEFLEMPTTIEE-LEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKE 862
E + E+ T +EE + IQ + + S + Q +++E EH R + D KE
Sbjct: 189 EAKLKEIKTILEEEITPTIQ-KLKEERSSYLEYQKVMREIEHLSRLYIAYQFLRAEDTKE 247
Query: 863 LKRFLAEIDALKEKWLPTLRNLVAQINE 890
R E+ +++K + L+ ++++ NE
Sbjct: 248 --RSAGELKEMQDK-IVNLQEVLSE-NE 271
Score = 56 (24.8 bits), Expect = 7.0e-15, Sum P(3) = 7.0e-15
Identities = 15/53 (28%), Positives = 28/53 (52%)
Query: 496 KNLKPFDVPILNYVSNESSRKE-PFQISEEMRALGISAR-LDQVFDAPHAVKE 546
K+ FD+ N S E+ RKE ++E+ +AL + + ++ D H ++E
Sbjct: 312 KSQSAFDLKKKNLASEETKRKELQNSMAEDSKALAAKEKEVKKITDGLHGLQE 364
Score = 54 (24.1 bits), Expect = 0.00096, Sum P(2) = 0.00096
Identities = 44/191 (23%), Positives = 81/191 (42%)
Query: 671 EKRKRREMENHINLRKRKLESIEKE-DDINTALAKLVDQAADLNIQQFKYAIEIKNLLVE 729
E+ KR+E++N + + L + EKE I L L +A++ + + A + N +
Sbjct: 327 EETKRKELQNSMAEDSKALAAKEKEVKKITDGLHGL-QEASNKDAEALAAAQQHFNAVSA 385
Query: 730 IVSCKWSYAEKHMASIEFDAK--IRELEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLS 787
+S AE +A K I + + KQ + A ++ K + +K S
Sbjct: 386 GLSSNEDGAEATLAGQMIACKNDISKAQTEAKQAQMKLKHAQ---QELKSKQAEVKKMDS 442
Query: 788 DAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQR 847
K+ + AF + KE LE T +++L ++N + +L+++ R
Sbjct: 443 GYKKDQD--AFEAVKKAKEKLE--TEMKKLN--YEEN---------KEEKLLEKHRQLSR 487
Query: 848 QIEDLSTKQEA 858
I +L K EA
Sbjct: 488 DINNLKGKHEA 498
Score = 52 (23.4 bits), Expect = 8.8e-07, Sum P(2) = 8.8e-07
Identities = 20/92 (21%), Positives = 43/92 (46%)
Query: 160 KLSPVKLLEETEKAVGDP-QLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQE 218
K +K E + GD Q +Q + ++ +L ++ T++ + +TL K + + E
Sbjct: 711 KYRQLKQQWEMKTEEGDLLQTKLQQSSYHKQQEELDALKKTIEESEETLKSTKEIQKKAE 770
Query: 219 KDVERVRQR-----AELLEKVESMKKKLPWLK 245
+ E + + AE ++++ +KKL K
Sbjct: 771 EKYEALENKMKNAEAEREKELKDAQKKLDCAK 802
Score = 50 (22.7 bits), Expect = 2.9e-14, Sum P(3) = 2.9e-14
Identities = 16/57 (28%), Positives = 29/57 (50%)
Query: 383 QANQKRLQKS--EKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAENIFEA 437
+ +K LQ S E K L + +++ +D L +++ +NK AL + A+ F A
Sbjct: 328 ETKRKELQNSMAEDSKALAAKEKEVKKITDGLHGLQEASNKDAEAL--AAAQQHFNA 382
Score = 50 (22.7 bits), Expect = 4.3e-14, Sum P(4) = 4.3e-14
Identities = 14/59 (23%), Positives = 31/59 (52%)
Query: 377 ILELGVQANQKRLQKSEKE---KILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAE 432
+L+ +Q + Q+ E + K + +++ TL+ + K E+K L + ++N+ AE
Sbjct: 728 LLQTKLQQSSYHKQQEELDALKKTIEESEETLKSTKEIQKKAEEKYEALENKMKNAEAE 786
Score = 49 (22.3 bits), Expect = 8.4e-07, Sum P(3) = 8.4e-07
Identities = 15/74 (20%), Positives = 37/74 (50%)
Query: 178 QLPVQHCA--LVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVR----QRAELL 231
Q+ ++H L K +++K ++ K++ D +K + E +++++ + +LL
Sbjct: 420 QMKLKHAQQELKSKQAEVKKMDSGYKKDQDAFEAVKKAKEKLETEMKKLNYEENKEEKLL 479
Query: 232 EKVESMKKKLPWLK 245
EK + + + LK
Sbjct: 480 EKHRQLSRDINNLK 493
Score = 48 (22.0 bits), Expect = 6.9e-14, Sum P(4) = 6.9e-14
Identities = 16/63 (25%), Positives = 32/63 (50%)
Query: 362 AYEPPHDKIEKLGSQILELG-VQANQKRLQKSEKEKI-LNQNKLTLRQCSDRLKDMEDKN 419
+Y ++++ L I E + K +QK +EK +NK+ + ++R K+++D
Sbjct: 737 SYHKQQEELDALKKTIEESEETLKSTKEIQKKAEEKYEALENKMKNAE-AEREKELKDAQ 795
Query: 420 NKL 422
KL
Sbjct: 796 KKL 798
Score = 43 (20.2 bits), Expect = 4.3e-14, Sum P(4) = 4.3e-14
Identities = 13/45 (28%), Positives = 23/45 (51%)
Query: 209 QLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAEY 253
+LK+ E +K ++ + E V+ K+KL + +MKK Y
Sbjct: 429 ELKSKQAEVKKMDSGYKKDQDAFEAVKKAKEKL---ETEMKKLNY 470
Score = 39 (18.8 bits), Expect = 2.1e-06, Sum P(3) = 2.1e-06
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 426 LRNSGAENIFEAYCWL 441
L SG NI ++ C+L
Sbjct: 33 LNGSGKSNILDSICFL 48
>UNIPROTKB|I3LM67 [details] [associations]
symbol:LOC100738089 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0030915
"Smc5-Smc6 complex" evidence=IEA] [GO:0000724 "double-strand break
repair via homologous recombination" evidence=IEA]
InterPro:IPR027131 PANTHER:PTHR19306:SF1
GeneTree:ENSGT00550000074963 EMBL:CU915560
Ensembl:ENSSSCT00000022526 OMA:GTHPNTL Uniprot:I3LM67
Length = 131
Score = 203 (76.5 bits), Expect = 4.8e-15, P = 4.8e-15
Identities = 37/80 (46%), Positives = 53/80 (66%)
Query: 18 YMPGNIIEIELHNFMTFDHLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRA 77
++ G+I+ I + NF+T+D PG LN++IG NG+GKSS+VCAI L L G +GRA
Sbjct: 52 FVEGSIVRIAMENFLTYDICEVSPGPHLNMIIGANGTGKSSIVCAICLGLAGKPAFMGRA 111
Query: 78 TSIGAYVKRGEESGYIKISL 97
+G +VKRG G ++I L
Sbjct: 112 DKVGFFVKRGCSKGMVEIEL 131
>UNIPROTKB|O95347 [details] [associations]
symbol:SMC2 "Structural maintenance of chromosomes protein
2" species:9606 "Homo sapiens" [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0010032 "meiotic chromosome condensation"
evidence=IEA] [GO:0045132 "meiotic chromosome segregation"
evidence=IEA] [GO:0051383 "kinetochore organization" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000796 "condensin
complex" evidence=IDA] [GO:0000228 "nuclear chromosome"
evidence=IDA] [GO:0007076 "mitotic chromosome condensation"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0000793
"condensed chromosome" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] InterPro:IPR024704 InterPro:IPR010935
InterPro:IPR027120 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0005737
Reactome:REACT_115566 Reactome:REACT_21300
Pathway_Interaction_DB:aurora_b_pathway GO:GO:0051301 GO:GO:0006281
GO:GO:0006310 EMBL:CH471105 GO:GO:0007076 GO:GO:0000228
GO:GO:0000796 GO:GO:0007062 eggNOG:COG1196 SUPFAM:SSF75553
KO:K06674 PANTHER:PTHR18937:SF9 HOGENOM:HOG000228249 OMA:CQNGKIP
CTD:10592 HOVERGEN:HBG106605 EMBL:AF092563 EMBL:AL833191
EMBL:AL161791 EMBL:AL354938 EMBL:BC130385 EMBL:AF113673
EMBL:BN000163 IPI:IPI00007927 IPI:IPI00232806 RefSeq:NP_001036015.1
RefSeq:NP_001036016.1 RefSeq:NP_001252531.1 RefSeq:NP_006435.2
UniGene:Hs.119023 ProteinModelPortal:O95347 SMR:O95347
DIP:DIP-35422N IntAct:O95347 MINT:MINT-1161754 STRING:O95347
PhosphoSite:O95347 PaxDb:O95347 PRIDE:O95347
Ensembl:ENST00000286398 Ensembl:ENST00000303219
Ensembl:ENST00000374787 Ensembl:ENST00000374793
Ensembl:ENST00000493955 GeneID:10592 KEGG:hsa:10592 UCSC:uc004bbv.3
GeneCards:GC09P106856 H-InvDB:HIX0008250 HGNC:HGNC:14011 MIM:605576
neXtProt:NX_O95347 PharmGKB:PA37833 InParanoid:O95347
OrthoDB:EOG49S65K ChiTaRS:SMC2 GenomeRNAi:10592 NextBio:40225
ArrayExpress:O95347 Bgee:O95347 CleanEx:HS_SMC2
Genevestigator:O95347 GermOnline:ENSG00000136824 Uniprot:O95347
Length = 1197
Score = 158 (60.7 bits), Expect = 5.3e-15, Sum P(4) = 5.3e-15
Identities = 71/341 (20%), Positives = 144/341 (42%)
Query: 652 DEAAKLQKEREEIINIVQIEKRK-RREMENHINLRKRKLESIEK-EDDINTALAKLVDQA 709
D ++K KE+++ + + +E + +RE ++ + E+I+ E I A++
Sbjct: 806 DASSKKMKEKQQEVEAITLELEELKREHTSYKQQLEAVNEAIKSYESQIEVMAAEVAKNK 865
Query: 710 ADLNIQQFKYAIEIKNLLVEIVSCKWSYAE--KHMA-SIEFDAKIRELEFNLKQHEKLAL 766
+N Q + + + + + K YAE KH + + KI+EL+ N+ +H++ A
Sbjct: 866 ESVNKAQEEVTKQKEVITAQDTVIKAKYAEVAKHKEQNNDSQLKIKELDHNISKHKREAE 925
Query: 767 QASLHYEDCKKEVE--HCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDN 824
+ K+ + + +HL A P KE + ++E++ + N
Sbjct: 926 DGAAKVSKMLKDYDWINAERHLFGQPNSAYDFKTNNP---KEAGQRLQKLQEMKEKLGRN 982
Query: 825 ISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNL 884
++ N+L E E R DL K+ + + + L I+ L +K L
Sbjct: 983 VNMRA------MNVLTEAEERYN---DLMKKKRIVENDKSKILTTIEDLDQKKNQALNIA 1033
Query: 885 VAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVLSAHHQSGGER 944
++N+ F F + L E G+ KV + + E L+ SGG+R
Sbjct: 1034 WQKVNKDFGSIFSTLLPGANAMLAPPEGQTVLDGLEFKVALGNTWK-ENLT--ELSGGQR 1090
Query: 945 SVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQL 985
S+ + ++S+ P ++DE++ +D + + + Q L
Sbjct: 1091 SLVALSLILSMLLFKPAPIYILDEVDAALDLSHTQNIGQML 1131
Score = 122 (48.0 bits), Expect = 5.3e-15, Sum P(4) = 5.3e-15
Identities = 43/184 (23%), Positives = 84/184 (45%)
Query: 46 NLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSIGAYVKRGEESGYIKISL-----RGD 100
N + G NGSGKS+++ +I LG RA+++ V + ++G K S+ D
Sbjct: 28 NAITGLNGSGKSNILDSICFLLGISNLSQVRASNLQDLVYKNGQAGITKASVSITFDNSD 87
Query: 101 TKE--------EHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQFLPQ 152
K+ + +T+ R++ ++++ NG V ++ + VNN + Q
Sbjct: 88 KKQSPLGFEVHDEITVTRQVVIGGRNKYLINGVNANNTRVQDLFCSVGLNVNNPHFLIMQ 147
Query: 153 DRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCA----LVEKSSKLKTIECTVKRN-GDTL 207
R+ + + P ++L E+A G + A + +K +KLK I+ ++ T+
Sbjct: 148 GRITKVLNMKPPEILSMIEEAAGTRMYEYKKIAAQKTIEKKEAKLKEIKTILEEEITPTI 207
Query: 208 NQLK 211
+LK
Sbjct: 208 QKLK 211
Score = 101 (40.6 bits), Expect = 7.1e-09, Sum P(3) = 7.1e-09
Identities = 50/252 (19%), Positives = 113/252 (44%)
Query: 676 REMENHINLRKRKLESIEKEDDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKW 735
+++++ + +++ +L ++E+E LA L + A +Q K E+K +++ K
Sbjct: 682 KDVQDELRIKENELRALEEE------LAGLKNTAE--KYRQLKQQWEMKTEEADLLQTKL 733
Query: 736 SYAEKHMASIEFDA---KIRELEFNLKQHEKLALQASLHYEDCKKEVEHCR----KHLSD 788
+ H E DA I E E LK +++ +A YE + ++++ + L D
Sbjct: 734 QQSSYHKQQEELDALKKTIEESEETLKNTKEIQRKAEEKYEVLENKMKNAEAERERELKD 793
Query: 789 AKRQAESIAFITPELEKEFLEMPTTIE----ELEAAIQDNISQANSIFFLNQNILQEYEH 844
A+++ + K+ E +E ELE +++ S + +N+ I + YE
Sbjct: 794 AQKKLDCAKTKADASSKKMKEKQQEVEAITLELEELKREHTSYKQQLEAVNEAI-KSYES 852
Query: 845 RQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGE 904
QIE ++ + +K+ + + A+ + K+K + T ++ V + +E +
Sbjct: 853 ---QIEVMAAEVAKNKESVNK--AQEEVTKQKEVITAQDTVIKAKYAEVAKHKEQNNDSQ 907
Query: 905 VSLDEHESDFDK 916
+ + E + + K
Sbjct: 908 LKIKELDHNISK 919
Score = 89 (36.4 bits), Expect = 1.1e-07, Sum P(3) = 1.1e-07
Identities = 54/299 (18%), Positives = 128/299 (42%)
Query: 643 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREME---NHINLRKRKLE--SIEKEDD 697
+Q E R+ E+E L++E + N + ++ +++ E +L + KL+ S K+ +
Sbjct: 684 VQDELRIKENELRALEEELAGLKNTAEKYRQLKQQWEMKTEEADLLQTKLQQSSYHKQQE 743
Query: 698 INTALAKLVDQAADL--NIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELE 755
AL K ++++ + N ++ + E K ++E K + AE+ + K+ +
Sbjct: 744 ELDALKKTIEESEETLKNTKEIQRKAEEKYEVLEN-KMKNAEAERERELKDAQKKLDCAK 802
Query: 756 FNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIE 815
K + E E+E ++ + K+Q E++ E + M +
Sbjct: 803 TKADASSKKMKEKQQEVEAITLELEELKREHTSYKQQLEAVNEAIKSYESQIEVMAAEVA 862
Query: 816 ELEAAI---QDNISQANSIFFLNQNILQ-EY----EHRQR------QIEDLSTKQEADKK 861
+ + ++ Q+ +++ + +++ +Y +H+++ +I++L K+
Sbjct: 863 KNKESVNKAQEEVTKQKEVITAQDTVIKAKYAEVAKHKEQNNDSQLKIKELDHNISKHKR 922
Query: 862 ELKRFLAEIDA-LKE-KWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFG 918
E + A++ LK+ W+ R+L Q N + AG+ L + + +K G
Sbjct: 923 EAEDGAAKVSKMLKDYDWINAERHLFGQPNSAYDFKTNNPKEAGQ-RLQKLQEMKEKLG 980
Score = 64 (27.6 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 58/255 (22%), Positives = 115/255 (45%)
Query: 649 LIEDEAAKLQKEREEIIN-IVQIEKRKRREMENHINLRKRKLESIEKEDDINTA--LAKL 705
L ED + +E +E+ + ++++++ + E + I ++E +EK D T L L
Sbjct: 241 LAEDTKVRSAEELKEMQDKVIKLQE-ELSENDKKIKALNHEIEELEKRKDKETGGILRSL 299
Query: 706 VDQAAD---LNIQ-QFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQH 761
D A+ +N + Q + ++ KNL E K EK+M +E D+K K+
Sbjct: 300 EDALAEAQRVNTKSQSAFDLKKKNLACE--ESKRKELEKNM--VE-DSKT----LAAKEK 350
Query: 762 EKLALQASLH--YEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEA 819
E + LH E K+ E L+ A++ +++ E + E T+
Sbjct: 351 EVKKITDGLHALQEASNKDAEA----LAAAQQHFNAVSAGLSSNE-DGAE--ATLAGQMM 403
Query: 820 AIQDNISQANSIFFLNQNIL----QEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKE 875
A +++IS+A + Q L QE +++Q +++ + + D++ L+ + LKE
Sbjct: 404 ACKNDISKAQTEAKQAQMKLKHAQQELKNKQAEVKKMDSGYRKDQEALEA----VKRLKE 459
Query: 876 KWLPTLRNLVAQINE 890
K ++ L + N+
Sbjct: 460 KLEAEMKKLNYEENK 474
Score = 56 (24.8 bits), Expect = 0.00077, Sum P(2) = 0.00077
Identities = 29/119 (24%), Positives = 52/119 (43%)
Query: 804 EKEFLEMPTTIEE-LEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKE 862
E + E+ T +EE + IQ + + S + Q +++E EH R D K
Sbjct: 189 EAKLKEIKTILEEEITPTIQ-KLKEERSSYLEYQKVMREIEHLSRLYIAYQFLLAEDTK- 246
Query: 863 LKRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEM-AVAGEVSLDEHESDFDKFGIL 920
+ + LKE +++ V ++ E S N +++ A+ E+ E D + GIL
Sbjct: 247 ----VRSAEELKE-----MQDKVIKLQEELSENDKKIKALNHEIEELEKRKDKETGGIL 296
Score = 52 (23.4 bits), Expect = 5.3e-15, Sum P(4) = 5.3e-15
Identities = 16/45 (35%), Positives = 24/45 (53%)
Query: 209 QLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAEY 253
+LK E +K R+ E LE V+ +K+KL + +MKK Y
Sbjct: 429 ELKNKQAEVKKMDSGYRKDQEALEAVKRLKEKL---EAEMKKLNY 470
Score = 51 (23.0 bits), Expect = 1.1e-14, Sum P(3) = 1.1e-14
Identities = 15/53 (28%), Positives = 26/53 (49%)
Query: 496 KNLKPFDVPILNYVSNESSRKE-PFQISEEMRALGISAR-LDQVFDAPHAVKE 546
K+ FD+ N ES RKE + E+ + L + + ++ D HA++E
Sbjct: 312 KSQSAFDLKKKNLACEESKRKELEKNMVEDSKTLAAKEKEVKKITDGLHALQE 364
Score = 51 (23.0 bits), Expect = 4.1e-07, Sum P(3) = 4.1e-07
Identities = 15/74 (20%), Positives = 38/74 (51%)
Query: 178 QLPVQHCA--LVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVR----QRAELL 231
Q+ ++H L K +++K ++ +++ + L +K L + E +++++ + LL
Sbjct: 420 QMKLKHAQQELKNKQAEVKKMDSGYRKDQEALEAVKRLKEKLEAEMKKLNYEENKEESLL 479
Query: 232 EKVESMKKKLPWLK 245
EK + + + LK
Sbjct: 480 EKRRQLSRDIGRLK 493
Score = 50 (22.7 bits), Expect = 0.00082, Sum P(3) = 0.00082
Identities = 30/129 (23%), Positives = 62/129 (48%)
Query: 362 AYEPPHDKIEKLGSQILELG-VQANQKRLQKSEKEKI-LNQNKLTLRQCSDRLKDMEDKN 419
+Y ++++ L I E N K +Q+ +EK + +NK+ + ++R ++++D
Sbjct: 737 SYHKQQEELDALKKTIEESEETLKNTKEIQRKAEEKYEVLENKMKNAE-AERERELKDAQ 795
Query: 420 NKLLHALRNSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLE--DHVGH 477
KL A + A + +++ + E+ EA + LE+ R H +Y + + V
Sbjct: 796 KKLDCAKTKADASSKK-----MKEKQQEV--EA---ITLELEELKREHTSYKQQLEAVNE 845
Query: 478 YIWKSFITQ 486
I KS+ +Q
Sbjct: 846 AI-KSYESQ 853
Score = 49 (22.3 bits), Expect = 1.8e-14, Sum P(3) = 1.8e-14
Identities = 15/57 (26%), Positives = 31/57 (54%)
Query: 383 QANQKRLQKS--EKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAENIFEA 437
++ +K L+K+ E K L + +++ +D L +++ +NK AL + A+ F A
Sbjct: 328 ESKRKELEKNMVEDSKTLAAKEKEVKKITDGLHALQEASNKDAEAL--AAAQQHFNA 382
Score = 47 (21.6 bits), Expect = 5.3e-15, Sum P(4) = 5.3e-15
Identities = 13/61 (21%), Positives = 32/61 (52%)
Query: 375 SQILELGVQANQKRLQKSEKE---KILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGA 431
+ +L+ +Q + Q+ E + K + +++ TL+ + + E+K L + ++N+ A
Sbjct: 726 ADLLQTKLQQSSYHKQQEELDALKKTIEESEETLKNTKEIQRKAEEKYEVLENKMKNAEA 785
Query: 432 E 432
E
Sbjct: 786 E 786
Score = 47 (21.6 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 14/75 (18%), Positives = 33/75 (44%)
Query: 178 QLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESM 237
Q +Q + ++ +L ++ T++ + +TL K + + E+ E + + + E
Sbjct: 730 QTKLQQSSYHKQQEELDALKKTIEESEETLKNTKEIQRKAEEKYEVLENKMKNAEAERER 789
Query: 238 KKKLPWLKYDMKKAE 252
+ K K D K +
Sbjct: 790 ELKDAQKKLDCAKTK 804
Score = 39 (18.8 bits), Expect = 2.6e-06, Sum P(3) = 2.6e-06
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 426 LRNSGAENIFEAYCWL 441
L SG NI ++ C+L
Sbjct: 33 LNGSGKSNILDSICFL 48
>UNIPROTKB|F1MY41 [details] [associations]
symbol:SMC2 "Structural maintenance of chromosomes protein"
species:9913 "Bos taurus" [GO:0000796 "condensin complex"
evidence=ISS] [GO:0046982 "protein heterodimerization activity"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0000228
"nuclear chromosome" evidence=ISS] [GO:0051383 "kinetochore
organization" evidence=IEA] [GO:0045132 "meiotic chromosome
segregation" evidence=IEA] [GO:0010032 "meiotic chromosome
condensation" evidence=IEA] [GO:0007076 "mitotic chromosome
condensation" evidence=IEA] [GO:0007062 "sister chromatid cohesion"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR024704 InterPro:IPR010935
InterPro:IPR027120 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0005737
GO:GO:0006281 GO:GO:0006310 GO:GO:0046982 GO:GO:0007076
GO:GO:0000228 GO:GO:0000796 GO:GO:0007062 SUPFAM:SSF75553
GeneTree:ENSGT00550000074857 PANTHER:PTHR18937:SF9 OMA:CQNGKIP
EMBL:DAAA02024368 IPI:IPI01001793 Ensembl:ENSBTAT00000011562
NextBio:20877854 Uniprot:F1MY41
Length = 1191
Score = 155 (59.6 bits), Expect = 5.3e-15, Sum P(4) = 5.3e-15
Identities = 74/334 (22%), Positives = 144/334 (43%)
Query: 652 DEAAKLQKEREEIINIVQIEKRK-RRE---MENHINLRKRKLESIEKEDDINTA-LAK-- 704
D ++K KE+++ + + +E + RRE E + K + S E + + + +AK
Sbjct: 806 DASSKKMKEKQQEVEAITLELEELRREHASYEQQLEAVKEAIISYEGQIAVMASEVAKNE 865
Query: 705 -LVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMA-SIEFDAKIRELEFNLKQHE 762
LV++A + + + K I ++ I+ K++ +H + E KI+EL+ N+ +H+
Sbjct: 866 ELVNKAQE-EVSKQKEVITAQD---NIIKAKYAEIAQHKEQNNESQLKIKELDHNISKHK 921
Query: 763 KLALQASLHYEDCKKEVEHC--RKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAA 820
+ A A+ K+ + KHL P KE E ++E++
Sbjct: 922 REAEDAAAKVSKMLKDYDWITVEKHLFGQPNSTYDFKANNP---KEAGERLQKLQEMKEK 978
Query: 821 IQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPT 880
+ N++ N+L E E R DL K+ + + + LA I+ L +K
Sbjct: 979 LGRNVNMRA------MNVLTEAEERYN---DLMKKKRIVENDKSKILATIEDLDQKKNQA 1029
Query: 881 LRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVLSAHHQS 940
+ ++N+ F F + L E G+ KV + + E L+ S
Sbjct: 1030 INIAWQKVNKDFGSIFSTLLPGANAMLAPPEGQTVLDGLEFKVALGNTWK-ENLT--ELS 1086
Query: 941 GGERSVSTILYLVSLQDLTNCPFRVVDEINQGMD 974
GG+RS+ + ++S+ P ++DE++ +D
Sbjct: 1087 GGQRSLVALSLILSMLLFKPAPIYILDEVDAALD 1120
Score = 120 (47.3 bits), Expect = 9.5e-10, Sum P(4) = 9.5e-10
Identities = 63/295 (21%), Positives = 128/295 (43%)
Query: 644 QTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLE--SIEKEDDINTA 701
+ E R +E+E A L+ E+ ++ Q + K E ++L + KL+ S K+ + A
Sbjct: 692 ENELRALEEELANLKNTAEKYRHLKQQWEMKAEE----VDLLQTKLQQSSYHKQQEELDA 747
Query: 702 LAKLVDQAADL--NIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLK 759
L K+++++ + N ++ + E K ++E K + AE+ + K+ +
Sbjct: 748 LKKIIEESEETLKNTKEIQKKAEEKYEVLEN-KMKNAEAERERELKDAQKKLDCAKTKAD 806
Query: 760 QHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTI---EE 816
K + E E+E R+ + ++Q E++ E + M + + EE
Sbjct: 807 ASSKKMKEKQQEVEAITLELEELRREHASYEQQLEAVKEAIISYEGQIAVMASEVAKNEE 866
Query: 817 LEAAIQDNISQANSIFFLNQNILQ-EY----EHRQRQIEDLSTKQEAD------KKELKR 865
L Q+ +S+ + NI++ +Y +H+++ E +E D K+E +
Sbjct: 867 LVNKAQEEVSKQKEVITAQDNIIKAKYAEIAQHKEQNNESQLKIKELDHNISKHKREAED 926
Query: 866 FLAEIDA-LKE-KWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFG 918
A++ LK+ W+ ++L Q N T+ AGE L + + +K G
Sbjct: 927 AAAKVSKMLKDYDWITVEKHLFGQPNSTYDFKANNPKEAGE-RLQKLQEMKEKLG 980
Score = 115 (45.5 bits), Expect = 5.3e-15, Sum P(4) = 5.3e-15
Identities = 42/184 (22%), Positives = 86/184 (46%)
Query: 46 NLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSIGAYVKRGEESGYIK--ISL---RGD 100
N + G NGSGKS+++ +I LG RA+++ V + ++G K +S+ D
Sbjct: 28 NAITGLNGSGKSNILDSICFLLGISNLSQVRASNLQDLVYKNGQAGITKALVSITFDNSD 87
Query: 101 TKE--------EHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQFLPQ 152
K+ + +T+ R++ ++++ NG V ++ + VNN + Q
Sbjct: 88 KKQSPLGFEVHDEITVTRQVVIGGRNKYLINGVNANNTRVYDLFCSVGLNVNNPHFLIMQ 147
Query: 153 DRVCEFAKLSPVKLLEETEKAVGDP--QLPVQHC--ALVEKSSKLKTIECTVKRN-GDTL 207
R+ + + P ++L E+A G + Q+ + +K +KL+ I+ ++ T+
Sbjct: 148 GRITKVMNMKPPEILSMIEEAAGTRMYEYKKQNAQRTIEKKEAKLREIKTILEEEITPTI 207
Query: 208 NQLK 211
+LK
Sbjct: 208 QKLK 211
Score = 58 (25.5 bits), Expect = 5.3e-15, Sum P(4) = 5.3e-15
Identities = 27/112 (24%), Positives = 57/112 (50%)
Query: 362 AYEPPHDKIEKLGSQILELGVQA--NQKRLQKSEKEKI-LNQNKLTLRQCSDRLKDMEDK 418
+Y ++++ L +I+E + N K +QK +EK + +NK+ + ++R ++++D
Sbjct: 737 SYHKQQEELDAL-KKIIEESEETLKNTKEIQKKAEEKYEVLENKMKNAE-AERERELKDA 794
Query: 419 NNKLLHALRNSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANY 470
KL A + A + +++ + E+ EA + LE+ R HA+Y
Sbjct: 795 QKKLDCAKTKADASSKK-----MKEKQQEV--EA---ITLELEELRREHASY 836
Score = 57 (25.1 bits), Expect = 1.7e-08, Sum P(3) = 1.7e-08
Identities = 16/85 (18%), Positives = 42/85 (49%)
Query: 167 LEETEKAVGDPQLPVQHCA--LVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERV 224
+ +T+ Q+ ++H L K +++K ++ +++ + L +K L + E +++R+
Sbjct: 409 ISKTQTEAKQAQMKLKHAQQELKTKQTEIKKMDSGYRKDQEALEAVKKLKEKLETEMKRL 468
Query: 225 R----QRAELLEKVESMKKKLPWLK 245
+ LLE+ + + + LK
Sbjct: 469 NYEENKEESLLERRRQLSRDISRLK 493
Score = 56 (24.8 bits), Expect = 8.5e-15, Sum P(4) = 8.5e-15
Identities = 15/70 (21%), Positives = 37/70 (52%)
Query: 363 YEPPHDKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKL 422
+E ++++ L +++ + Q+ L +K I+ +++ TL+ + K E+K L
Sbjct: 719 WEMKAEEVDLLQTKLQQSSYHKQQEELDALKK--IIEESEETLKNTKEIQKKAEEKYEVL 776
Query: 423 LHALRNSGAE 432
+ ++N+ AE
Sbjct: 777 ENKMKNAEAE 786
Score = 51 (23.0 bits), Expect = 5.3e-15, Sum P(4) = 5.3e-15
Identities = 15/45 (33%), Positives = 24/45 (53%)
Query: 209 QLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAEY 253
+LK E +K R+ E LE V+ +K+KL + +MK+ Y
Sbjct: 429 ELKTKQTEIKKMDSGYRKDQEALEAVKKLKEKL---ETEMKRLNY 470
Score = 51 (23.0 bits), Expect = 2.1e-13, Sum P(4) = 2.1e-13
Identities = 17/66 (25%), Positives = 31/66 (46%)
Query: 358 QTVPAYEPPHDKIEKLGSQILELG--VQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDM 415
++ A + DKI+KL ++ E ++A +++ EK K + LR D L +
Sbjct: 248 RSAEALKEMQDKIKKLQEEVYENDKKIKALSHEIEELEKRKDKEVGGI-LRSLEDALTEA 306
Query: 416 EDKNNK 421
+ N K
Sbjct: 307 QRVNTK 312
Score = 49 (22.3 bits), Expect = 1.0e-07, Sum P(3) = 1.0e-07
Identities = 18/69 (26%), Positives = 34/69 (49%)
Query: 165 KLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERV 224
KLL E E +L + + L+ + +K ++ E +K D + +L+ E +K ++ +
Sbjct: 222 KLLREIEHL---SRLYIAYQFLLAEDTKERSAEA-LKEMQDKIKKLQEEVYENDKKIKAL 277
Query: 225 RQRAELLEK 233
E LEK
Sbjct: 278 SHEIEELEK 286
Score = 44 (20.5 bits), Expect = 6.0e-13, Sum P(3) = 6.0e-13
Identities = 12/43 (27%), Positives = 24/43 (55%)
Query: 386 QKRLQKS--EKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHAL 426
+K L+K+ E K L + +++ +D L +++ +NK AL
Sbjct: 331 RKELEKNMVEDSKTLAAKEKEVKKITDGLSALQEASNKDAEAL 373
Score = 43 (20.2 bits), Expect = 4.2e-07, Sum P(3) = 4.2e-07
Identities = 23/98 (23%), Positives = 45/98 (45%)
Query: 159 AKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQE 218
AKL +K + E E +L + + +E L+ IE + R L A + + E
Sbjct: 190 AKLREIKTILEEEITPTIQKLKEERSSYLEYQKLLREIE-HLSRLYIAYQFLLAEDTK-E 247
Query: 219 KDVERVRQRAE----LLEKVESMKKKLPWLKYDMKKAE 252
+ E +++ + L E+V KK+ L +++++ E
Sbjct: 248 RSAEALKEMQDKIKKLQEEVYENDKKIKALSHEIEELE 285
Score = 42 (19.8 bits), Expect = 2.1e-13, Sum P(4) = 2.1e-13
Identities = 14/53 (26%), Positives = 25/53 (47%)
Query: 496 KNLKPFDVPILNYVSNESSRKE-PFQISEEMRALGISAR-LDQVFDAPHAVKE 546
K+ FD N S E+ RKE + E+ + L + + ++ D A++E
Sbjct: 312 KSQSAFDFKKKNLASEENKRKELEKNMVEDSKTLAAKEKEVKKITDGLSALQE 364
Score = 42 (19.8 bits), Expect = 7.3e-06, Sum P(2) = 7.3e-06
Identities = 13/75 (17%), Positives = 32/75 (42%)
Query: 178 QLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESM 237
Q +Q + ++ +L ++ ++ + +TL K + + E+ E + + + E
Sbjct: 730 QTKLQQSSYHKQQEELDALKKIIEESEETLKNTKEIQKKAEEKYEVLENKMKNAEAERER 789
Query: 238 KKKLPWLKYDMKKAE 252
+ K K D K +
Sbjct: 790 ELKDAQKKLDCAKTK 804
Score = 40 (19.1 bits), Expect = 2.7e-12, Sum P(4) = 2.7e-12
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 404 TLRQCSDRLKDMEDKNNKL 422
T + ++ LK+M+DK KL
Sbjct: 245 TKERSAEALKEMQDKIKKL 263
Score = 39 (18.8 bits), Expect = 4.0e-05, Sum P(3) = 4.0e-05
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 426 LRNSGAENIFEAYCWL 441
L SG NI ++ C+L
Sbjct: 33 LNGSGKSNILDSICFL 48
>UNIPROTKB|D4A5Q2 [details] [associations]
symbol:Smc2 "Structural maintenance of chromosomes protein"
species:10116 "Rattus norvegicus" [GO:0000228 "nuclear chromosome"
evidence=IEA] [GO:0000796 "condensin complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0007076 "mitotic chromosome
condensation" evidence=IEA] [GO:0010032 "meiotic chromosome
condensation" evidence=IEA] [GO:0045132 "meiotic chromosome
segregation" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0051383 "kinetochore organization"
evidence=IEA] InterPro:IPR024704 InterPro:IPR010935
InterPro:IPR027120 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 RGD:1305227 GO:GO:0005524
GO:GO:0005634 GO:GO:0005694 GO:GO:0006281 GO:GO:0006310
GO:GO:0030261 GO:GO:0007062 SUPFAM:SSF75553
GeneTree:ENSGT00550000074857 KO:K06674 PANTHER:PTHR18937:SF9
CTD:10592 OrthoDB:EOG49S65K IPI:IPI00950982 RefSeq:NP_001102136.2
Ensembl:ENSRNOT00000066226 GeneID:362519 KEGG:rno:362519
ArrayExpress:D4A5Q2 Uniprot:D4A5Q2
Length = 1191
Score = 155 (59.6 bits), Expect = 6.7e-15, Sum P(4) = 6.7e-15
Identities = 72/342 (21%), Positives = 145/342 (42%)
Query: 652 DEAAKLQKEREEIINIVQIE----KRKRREMENHINLRKRKLESIEKEDDINTA-LAKLV 706
D ++K KE+++ + + +E KR+ E ++ +++ E + +I A +AK
Sbjct: 806 DASSKKMKEKQQEVEAITLELEELKREHASNEQQLDAVNEAIKAYEGQIEIMAAEVAKNK 865
Query: 707 DQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKH-MASIEFDAKIRELEFNLKQHEKLA 765
+ + K EI + I+ K + KH + + + KI+EL+ ++ +H++ A
Sbjct: 866 ESVNKAQNELMKQK-EIISAQDNIIKDKCAEVAKHNLQNNDSQLKIKELDHSISKHKREA 924
Query: 766 LQASLHYEDCKKEVE--HCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQD 823
A+ + + + KHL A P KE + ++E++ +
Sbjct: 925 DDAAAKVSKMLNDYDWINAEKHLFGQPNSAYDFKTNNP---KEAGQRLQKLQEVKEKLGR 981
Query: 824 NISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRN 883
N++ N+L E E R DL K+ + + + LA I+ L +K L
Sbjct: 982 NVNMRA------MNVLTEAEERYN---DLMKKKRIVENDKSKILATIEDLDQKKNQALNI 1032
Query: 884 LVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVLSAHHQSGGE 943
++N+ F F + L E G+ KV + + E L+ SGG+
Sbjct: 1033 AWQKVNKDFGSIFSTLLPGANAMLAPPEGQTVLDGLEFKVALGNTWK-ENLT--ELSGGQ 1089
Query: 944 RSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQL 985
RS+ + ++S+ P ++DE++ +D + + + Q L
Sbjct: 1090 RSLVALSLILSMLLFKPAPIYILDEVDAALDLSHTQNIGQML 1131
Score = 123 (48.4 bits), Expect = 6.7e-15, Sum P(4) = 6.7e-15
Identities = 45/184 (24%), Positives = 84/184 (45%)
Query: 46 NLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSIGAYVKRGEESGYIKISL-----RGD 100
N + G NGSGKS+++ +I LG RA+++ V + ++G K S+ D
Sbjct: 28 NAITGLNGSGKSNILDSICFLLGISNLSQVRASNLQDLVYKNGQAGITKASVSITFDNSD 87
Query: 101 TK------EEH--LTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQFLPQ 152
K E H +T+ R++ ++++ NG V ++ + VNN + Q
Sbjct: 88 KKQSPLGFEAHDEITVTRQVVIGGRNKYLINGVNANNTRVQDLFCSVGLNVNNPHFLIMQ 147
Query: 153 DRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCA----LVEKSSKLKTIECTVKRN-GDTL 207
R+ + + P ++L E+A G + A + +K +KLK I+ ++ T+
Sbjct: 148 GRITKVLNMKPPEILSMIEEAAGTRMYEYKKIAAQKTIEKKEAKLKEIKTILEEEITPTI 207
Query: 208 NQLK 211
+LK
Sbjct: 208 QKLK 211
Score = 95 (38.5 bits), Expect = 8.8e-09, Sum P(4) = 8.8e-09
Identities = 50/235 (21%), Positives = 109/235 (46%)
Query: 676 REMENHINLRKRKLESIEKEDDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKW 735
++++ + ++++L+++E+E LA L + A +Q K E+K +++ K
Sbjct: 682 KDVQAELRTKEKELQALEEE------LAGLKNVAE--KYRQLKQQWEMKTEEGDLLQTKL 733
Query: 736 SYAEKHMASIEFDA---KIRELEFNLKQHEKLALQASLHYEDCKKEVEHCR----KHLSD 788
+ H E DA I E E LK +++ +A YE + ++++ K L D
Sbjct: 734 QQSSYHKQQEELDALKKTIEESEETLKNTKEIQKKAEEKYEALENKMKNAEAEREKELKD 793
Query: 789 AKRQAESIAFITPELEKEFLEMPTTIE----ELEAAIQDNISQANSIFFLNQNILQEYEH 844
A+++ + K+ E +E ELE +++ S + +N+ I + YE
Sbjct: 794 AQKKLDCAKTKADASSKKMKEKQQEVEAITLELEELKREHASNEQQLDAVNEAI-KAYEG 852
Query: 845 RQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLR-NLVA-QINETFSRNFQ 897
QIE ++ + +K+ + + A+ + +K+K + + + N++ + E N Q
Sbjct: 853 ---QIEIMAAEVAKNKESVNK--AQNELMKQKEIISAQDNIIKDKCAEVAKHNLQ 902
Score = 74 (31.1 bits), Expect = 9.8e-07, Sum P(4) = 9.8e-07
Identities = 52/238 (21%), Positives = 95/238 (39%)
Query: 652 DEAAKLQKEREEII-NIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKL--VDQ 708
D K +E EE + N +I+K+ + E N K K E+E ++ A KL
Sbjct: 746 DALKKTIEESEETLKNTKEIQKKAEEKYEALEN--KMKNAEAEREKELKDAQKKLDCAKT 803
Query: 709 AADLNIQQFKYAI-EIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQ 767
AD + ++ K E++ + +E+ K +A + DA ++ Q E +A +
Sbjct: 804 KADASSKKMKEKQQEVEAITLELEELKREHASNEQ---QLDAVNEAIKAYEGQIEIMAAE 860
Query: 768 ASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTT---IEELEAAIQDN 824
+ + E K K Q I E+ K L+ + I+EL+ +I +
Sbjct: 861 VAKNKESVNKAQNELMKQKEIISAQDNIIKDKCAEVAKHNLQNNDSQLKIKELDHSISKH 920
Query: 825 ISQANSIFFLNQNILQEYE------HRQRQIEDLSTKQEADKKELKRFLAEIDALKEK 876
+A+ +L +Y+ H Q + + KE + L ++ +KEK
Sbjct: 921 KREADDAAAKVSKMLNDYDWINAEKHLFGQPNSAYDFKTNNPKEAGQRLQKLQEVKEK 978
Score = 67 (28.6 bits), Expect = 4.7e-06, Sum P(4) = 4.7e-06
Identities = 26/98 (26%), Positives = 51/98 (52%)
Query: 789 AKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQ 848
A+ QA SI EL+ E+ T +EL+A +++ ++ ++ + + Q++E + +
Sbjct: 667 ARSQAASILTKFQELKDVQAELRTKEKELQA-LEEELAGLKNVAEKYRQLKQQWEMKTEE 725
Query: 849 IEDLSTKQEADKKELKRFLAEIDALK---EKWLPTLRN 883
+ L TK + ++ E+DALK E+ TL+N
Sbjct: 726 GDLLQTKLQQSSYHKQQ--EELDALKKTIEESEETLKN 761
Score = 61 (26.5 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 29/119 (24%), Positives = 52/119 (43%)
Query: 804 EKEFLEMPTTIEE-LEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKE 862
E + E+ T +EE + IQ + + S + Q +++E EH R D KE
Sbjct: 189 EAKLKEIKTILEEEITPTIQ-KLKEERSSYLEYQKVMREIEHLSRLYIAYQFLLAEDTKE 247
Query: 863 LKRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEM-AVAGEVSLDEHESDFDKFGIL 920
R E+ +++K + ++ E S N +++ A+ E+ E D + GIL
Sbjct: 248 --RSAGELKEMQDK--------ILKLQEVLSENEKKIKALNCEIEELEKRKDKETGGIL 296
Score = 59 (25.8 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 52/250 (20%), Positives = 105/250 (42%)
Query: 651 EDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTA--LAKLVDQ 708
E A +L++ +++I+ + ++ E E I ++E +EK D T L L D
Sbjct: 247 ERSAGELKEMQDKILKLQEVLS----ENEKKIKALNCEIEELEKRKDKETGGILRSLEDA 302
Query: 709 AADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQA 768
A+ + K+ + +K++AS E K +ELE N+ + K AL A
Sbjct: 303 FAEAQ------RVNTKS------QSAFDLKKKNLASEE--TKRKELEKNMAEDSK-ALAA 347
Query: 769 SLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQA 828
++ KK + + + AE++A + + + EA + +
Sbjct: 348 K--EKEVKKLTDGLHGLQEASNKDAEALAAAQQHFNAVSAGLSSNEDGAEATLAGQMMAC 405
Query: 829 -NSIFFLNQNILQ---EYEHRQRQIEDLSTK-QEAD---KKELKRFLAEIDALKEKWLPT 880
N I Q + +H Q+++++ + ++ D KK+ + F A + +KEK
Sbjct: 406 KNDISKAQTGAKQAQMKLKHAQQELKNKQAEVRKMDSGYKKDQEAFEA-VKKVKEKLETE 464
Query: 881 LRNLVAQINE 890
++ L + N+
Sbjct: 465 MKKLNYEDNK 474
Score = 54 (24.1 bits), Expect = 6.7e-15, Sum P(4) = 6.7e-15
Identities = 15/53 (28%), Positives = 28/53 (52%)
Query: 496 KNLKPFDVPILNYVSNESSRKE-PFQISEEMRALGISAR-LDQVFDAPHAVKE 546
K+ FD+ N S E+ RKE ++E+ +AL + + ++ D H ++E
Sbjct: 312 KSQSAFDLKKKNLASEETKRKELEKNMAEDSKALAAKEKEVKKLTDGLHGLQE 364
Score = 53 (23.7 bits), Expect = 1.3e-14, Sum P(4) = 1.3e-14
Identities = 17/63 (26%), Positives = 32/63 (50%)
Query: 362 AYEPPHDKIEKLGSQILELG-VQANQKRLQKSEKEKI-LNQNKLTLRQCSDRLKDMEDKN 419
+Y ++++ L I E N K +QK +EK +NK+ + ++R K+++D
Sbjct: 737 SYHKQQEELDALKKTIEESEETLKNTKEIQKKAEEKYEALENKMKNAE-AEREKELKDAQ 795
Query: 420 NKL 422
KL
Sbjct: 796 KKL 798
Score = 52 (23.4 bits), Expect = 6.9e-07, Sum P(2) = 6.9e-07
Identities = 20/92 (21%), Positives = 43/92 (46%)
Query: 160 KLSPVKLLEETEKAVGDP-QLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQE 218
K +K E + GD Q +Q + ++ +L ++ T++ + +TL K + + E
Sbjct: 711 KYRQLKQQWEMKTEEGDLLQTKLQQSSYHKQQEELDALKKTIEESEETLKNTKEIQKKAE 770
Query: 219 KDVERVRQR-----AELLEKVESMKKKLPWLK 245
+ E + + AE ++++ +KKL K
Sbjct: 771 EKYEALENKMKNAEAEREKELKDAQKKLDCAK 802
Score = 50 (22.7 bits), Expect = 2.7e-14, Sum P(4) = 2.7e-14
Identities = 14/59 (23%), Positives = 31/59 (52%)
Query: 377 ILELGVQANQKRLQKSEKE---KILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAE 432
+L+ +Q + Q+ E + K + +++ TL+ + K E+K L + ++N+ AE
Sbjct: 728 LLQTKLQQSSYHKQQEELDALKKTIEESEETLKNTKEIQKKAEEKYEALENKMKNAEAE 786
Score = 49 (22.3 bits), Expect = 2.8e-14, Sum P(3) = 2.8e-14
Identities = 15/57 (26%), Positives = 30/57 (52%)
Query: 383 QANQKRLQKS--EKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAENIFEA 437
+ +K L+K+ E K L + +++ +D L +++ +NK AL + A+ F A
Sbjct: 328 ETKRKELEKNMAEDSKALAAKEKEVKKLTDGLHGLQEASNKDAEAL--AAAQQHFNA 382
Score = 48 (22.0 bits), Expect = 1.8e-05, Sum P(4) = 1.8e-05
Identities = 45/179 (25%), Positives = 79/179 (44%)
Query: 644 QTEQRLIEDEAAKLQKERE-----EIINIVQIEKRKRREM----ENHINLRKRKLESIEK 694
+ E+ + ED A KE+E + ++ +Q K E + H N L S
Sbjct: 333 ELEKNMAEDSKALAAKEKEVKKLTDGLHGLQEASNKDAEALAAAQQHFNAVSAGLSS--N 390
Query: 695 EDDINTALA-KLVDQAADLNIQQF--KYA-IEIKNLLVEIVSCKWSYAEKHMASIEFDAK 750
ED LA +++ D++ Q K A +++K+ E+ + K + K + + D +
Sbjct: 391 EDGAEATLAGQMMACKNDISKAQTGAKQAQMKLKHAQQELKN-KQAEVRKMDSGYKKDQE 449
Query: 751 IRELEFNLKQHEKLALQAS-LHYEDCKKE--VEHCR---KHLSDAKRQAESIAFITPEL 803
E +K EKL + L+YED K+E +E R + +S+ K E++ P L
Sbjct: 450 AFEAVKKVK--EKLETEMKKLNYEDNKEERLLEKHRQVSRDISNLKGTYEALLAKFPNL 506
Score = 46 (21.3 bits), Expect = 6.7e-15, Sum P(4) = 6.7e-15
Identities = 14/51 (27%), Positives = 24/51 (47%)
Query: 404 TLRQCSDRLKDMEDKNNKLLHALRNSGAENIFEAYCWLQQHRHELNKEAYG 454
T + + LK+M+DK KL L + + I C +++ +KE G
Sbjct: 245 TKERSAGELKEMQDKILKLQEVL-SENEKKIKALNCEIEELEKRKDKETGG 294
Score = 44 (20.5 bits), Expect = 1.3e-14, Sum P(4) = 1.3e-14
Identities = 14/45 (31%), Positives = 22/45 (48%)
Query: 209 QLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAEY 253
+LK E K ++ E E V+ +K+KL + +MKK Y
Sbjct: 429 ELKNKQAEVRKMDSGYKKDQEAFEAVKKVKEKL---ETEMKKLNY 470
Score = 44 (20.5 bits), Expect = 9.1e-14, Sum P(3) = 9.1e-14
Identities = 27/107 (25%), Positives = 42/107 (39%)
Query: 473 DHVGH-YIWKSFI-TQDAGDRDFLAKNLKPFDVPILNY--VSNESSRK--------EPFQ 520
+H+ YI F+ +D +R A LK IL V +E+ +K E +
Sbjct: 228 EHLSRLYIAYQFLLAEDTKERS--AGELKEMQDKILKLQEVLSENEKKIKALNCEIEELE 285
Query: 521 ISEEMRALGISARLDQVFDAPHAVKEVLISQFGLDSSYIGSKETDQK 567
++ GI L+ F V S F L + S+ET +K
Sbjct: 286 KRKDKETGGILRSLEDAFAEAQRVNTKSQSAFDLKKKNLASEETKRK 332
Score = 39 (18.8 bits), Expect = 2.6e-06, Sum P(3) = 2.6e-06
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 426 LRNSGAENIFEAYCWL 441
L SG NI ++ C+L
Sbjct: 33 LNGSGKSNILDSICFL 48
Score = 39 (18.8 bits), Expect = 2.6e-06, Sum P(3) = 2.6e-06
Identities = 25/111 (22%), Positives = 50/111 (45%)
Query: 125 KVVPKGE--VLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQ 182
K + K E + EI ++ Q L ++R + L K++ E E +L +
Sbjct: 183 KTIEKKEAKLKEIKTILEEEITPTIQKLKEERS---SYLEYQKVMREIEHL---SRLYIA 236
Query: 183 HCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEK 233
+ L+ + +K ++ +K D + +L+ + E EK ++ + E LEK
Sbjct: 237 YQFLLAEDTKERSAG-ELKEMQDKILKLQEVLSENEKKIKALNCEIEELEK 286
>RGD|1305227 [details] [associations]
symbol:Smc2 "structural maintenance of chromosomes 2"
species:10116 "Rattus norvegicus" [GO:0000228 "nuclear chromosome"
evidence=ISO] [GO:0000793 "condensed chromosome" evidence=ISO]
[GO:0000796 "condensin complex" evidence=IEA;ISO] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA] [GO:0007076
"mitotic chromosome condensation" evidence=IEA;ISO] [GO:0010032
"meiotic chromosome condensation" evidence=ISO] [GO:0045132
"meiotic chromosome segregation" evidence=ISO] [GO:0046982 "protein
heterodimerization activity" evidence=ISO] [GO:0051383 "kinetochore
organization" evidence=ISO] InterPro:IPR024704 InterPro:IPR010935
InterPro:IPR027120 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 RGD:1305227 GO:GO:0005524
GO:GO:0005737 GO:GO:0006281 GO:GO:0006310 GO:GO:0007076
GO:GO:0000228 GO:GO:0000796 GO:GO:0007062 SUPFAM:SSF75553
PANTHER:PTHR18937:SF9 IPI:IPI00358733 PRIDE:D4AB57
Ensembl:ENSRNOT00000030563 UCSC:RGD:1305227 ArrayExpress:D4AB57
Uniprot:D4AB57
Length = 1230
Score = 155 (59.6 bits), Expect = 7.8e-15, Sum P(4) = 7.8e-15
Identities = 72/342 (21%), Positives = 145/342 (42%)
Query: 652 DEAAKLQKEREEIINIVQIE----KRKRREMENHINLRKRKLESIEKEDDINTA-LAKLV 706
D ++K KE+++ + + +E KR+ E ++ +++ E + +I A +AK
Sbjct: 806 DASSKKMKEKQQEVEAITLELEELKREHASNEQQLDAVNEAIKAYEGQIEIMAAEVAKNK 865
Query: 707 DQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKH-MASIEFDAKIRELEFNLKQHEKLA 765
+ + K EI + I+ K + KH + + + KI+EL+ ++ +H++ A
Sbjct: 866 ESVNKAQNELMKQK-EIISAQDNIIKDKCAEVAKHNLQNNDSQLKIKELDHSISKHKREA 924
Query: 766 LQASLHYEDCKKEVE--HCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQD 823
A+ + + + KHL A P KE + ++E++ +
Sbjct: 925 DDAAAKVSKMLNDYDWINAEKHLFGQPNSAYDFKTNNP---KEAGQRLQKLQEVKEKLGR 981
Query: 824 NISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRN 883
N++ N+L E E R DL K+ + + + LA I+ L +K L
Sbjct: 982 NVNMRA------MNVLTEAEERYN---DLMKKKRIVENDKSKILATIEDLDQKKNQALNI 1032
Query: 884 LVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVLSAHHQSGGE 943
++N+ F F + L E G+ KV + + E L+ SGG+
Sbjct: 1033 AWQKVNKDFGSIFSTLLPGANAMLAPPEGQTVLDGLEFKVALGNTWK-ENLT--ELSGGQ 1089
Query: 944 RSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQL 985
RS+ + ++S+ P ++DE++ +D + + + Q L
Sbjct: 1090 RSLVALSLILSMLLFKPAPIYILDEVDAALDLSHTQNIGQML 1131
Score = 123 (48.4 bits), Expect = 7.8e-15, Sum P(4) = 7.8e-15
Identities = 45/184 (24%), Positives = 84/184 (45%)
Query: 46 NLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSIGAYVKRGEESGYIKISL-----RGD 100
N + G NGSGKS+++ +I LG RA+++ V + ++G K S+ D
Sbjct: 28 NAITGLNGSGKSNILDSICFLLGISNLSQVRASNLQDLVYKNGQAGITKASVSITFDNSD 87
Query: 101 TK------EEH--LTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQFLPQ 152
K E H +T+ R++ ++++ NG V ++ + VNN + Q
Sbjct: 88 KKQSPLGFEAHDEITVTRQVVIGGRNKYLINGVNANNTRVQDLFCSVGLNVNNPHFLIMQ 147
Query: 153 DRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCA----LVEKSSKLKTIECTVKRN-GDTL 207
R+ + + P ++L E+A G + A + +K +KLK I+ ++ T+
Sbjct: 148 GRITKVLNMKPPEILSMIEEAAGTRMYEYKKIAAQKTIEKKEAKLKEIKTILEEEITPTI 207
Query: 208 NQLK 211
+LK
Sbjct: 208 QKLK 211
Score = 95 (38.5 bits), Expect = 1.0e-08, Sum P(4) = 1.0e-08
Identities = 50/235 (21%), Positives = 109/235 (46%)
Query: 676 REMENHINLRKRKLESIEKEDDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKW 735
++++ + ++++L+++E+E LA L + A +Q K E+K +++ K
Sbjct: 682 KDVQAELRTKEKELQALEEE------LAGLKNVAE--KYRQLKQQWEMKTEEGDLLQTKL 733
Query: 736 SYAEKHMASIEFDA---KIRELEFNLKQHEKLALQASLHYEDCKKEVEHCR----KHLSD 788
+ H E DA I E E LK +++ +A YE + ++++ K L D
Sbjct: 734 QQSSYHKQQEELDALKKTIEESEETLKNTKEIQKKAEEKYEALENKMKNAEAEREKELKD 793
Query: 789 AKRQAESIAFITPELEKEFLEMPTTIE----ELEAAIQDNISQANSIFFLNQNILQEYEH 844
A+++ + K+ E +E ELE +++ S + +N+ I + YE
Sbjct: 794 AQKKLDCAKTKADASSKKMKEKQQEVEAITLELEELKREHASNEQQLDAVNEAI-KAYEG 852
Query: 845 RQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLR-NLVA-QINETFSRNFQ 897
QIE ++ + +K+ + + A+ + +K+K + + + N++ + E N Q
Sbjct: 853 ---QIEIMAAEVAKNKESVNK--AQNELMKQKEIISAQDNIIKDKCAEVAKHNLQ 902
Score = 74 (31.1 bits), Expect = 1.1e-06, Sum P(4) = 1.1e-06
Identities = 52/238 (21%), Positives = 95/238 (39%)
Query: 652 DEAAKLQKEREEII-NIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKL--VDQ 708
D K +E EE + N +I+K+ + E N K K E+E ++ A KL
Sbjct: 746 DALKKTIEESEETLKNTKEIQKKAEEKYEALEN--KMKNAEAEREKELKDAQKKLDCAKT 803
Query: 709 AADLNIQQFKYAI-EIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQ 767
AD + ++ K E++ + +E+ K +A + DA ++ Q E +A +
Sbjct: 804 KADASSKKMKEKQQEVEAITLELEELKREHASNEQ---QLDAVNEAIKAYEGQIEIMAAE 860
Query: 768 ASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTT---IEELEAAIQDN 824
+ + E K K Q I E+ K L+ + I+EL+ +I +
Sbjct: 861 VAKNKESVNKAQNELMKQKEIISAQDNIIKDKCAEVAKHNLQNNDSQLKIKELDHSISKH 920
Query: 825 ISQANSIFFLNQNILQEYE------HRQRQIEDLSTKQEADKKELKRFLAEIDALKEK 876
+A+ +L +Y+ H Q + + KE + L ++ +KEK
Sbjct: 921 KREADDAAAKVSKMLNDYDWINAEKHLFGQPNSAYDFKTNNPKEAGQRLQKLQEVKEK 978
Score = 67 (28.6 bits), Expect = 5.4e-06, Sum P(4) = 5.4e-06
Identities = 26/98 (26%), Positives = 51/98 (52%)
Query: 789 AKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQ 848
A+ QA SI EL+ E+ T +EL+A +++ ++ ++ + + Q++E + +
Sbjct: 667 ARSQAASILTKFQELKDVQAELRTKEKELQA-LEEELAGLKNVAEKYRQLKQQWEMKTEE 725
Query: 849 IEDLSTKQEADKKELKRFLAEIDALK---EKWLPTLRN 883
+ L TK + ++ E+DALK E+ TL+N
Sbjct: 726 GDLLQTKLQQSSYHKQQ--EELDALKKTIEESEETLKN 761
Score = 61 (26.5 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 29/119 (24%), Positives = 52/119 (43%)
Query: 804 EKEFLEMPTTIEE-LEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKE 862
E + E+ T +EE + IQ + + S + Q +++E EH R D KE
Sbjct: 189 EAKLKEIKTILEEEITPTIQ-KLKEERSSYLEYQKVMREIEHLSRLYIAYQFLLAEDTKE 247
Query: 863 LKRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEM-AVAGEVSLDEHESDFDKFGIL 920
R E+ +++K + ++ E S N +++ A+ E+ E D + GIL
Sbjct: 248 --RSAGELKEMQDK--------ILKLQEVLSENEKKIKALNCEIEELEKRKDKETGGIL 296
Score = 59 (25.8 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 52/250 (20%), Positives = 105/250 (42%)
Query: 651 EDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTA--LAKLVDQ 708
E A +L++ +++I+ + ++ E E I ++E +EK D T L L D
Sbjct: 247 ERSAGELKEMQDKILKLQEVLS----ENEKKIKALNCEIEELEKRKDKETGGILRSLEDA 302
Query: 709 AADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQA 768
A+ + K+ + +K++AS E K +ELE N+ + K AL A
Sbjct: 303 FAEAQ------RVNTKS------QSAFDLKKKNLASEE--TKRKELEKNMAEDSK-ALAA 347
Query: 769 SLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQA 828
++ KK + + + AE++A + + + EA + +
Sbjct: 348 K--EKEVKKLTDGLHGLQEASNKDAEALAAAQQHFNAVSAGLSSNEDGAEATLAGQMMAC 405
Query: 829 -NSIFFLNQNILQ---EYEHRQRQIEDLSTK-QEAD---KKELKRFLAEIDALKEKWLPT 880
N I Q + +H Q+++++ + ++ D KK+ + F A + +KEK
Sbjct: 406 KNDISKAQTGAKQAQMKLKHAQQELKNKQAEVRKMDSGYKKDQEAFEA-VKKVKEKLETE 464
Query: 881 LRNLVAQINE 890
++ L + N+
Sbjct: 465 MKKLNYEDNK 474
Score = 54 (24.1 bits), Expect = 7.8e-15, Sum P(4) = 7.8e-15
Identities = 15/53 (28%), Positives = 28/53 (52%)
Query: 496 KNLKPFDVPILNYVSNESSRKE-PFQISEEMRALGISAR-LDQVFDAPHAVKE 546
K+ FD+ N S E+ RKE ++E+ +AL + + ++ D H ++E
Sbjct: 312 KSQSAFDLKKKNLASEETKRKELEKNMAEDSKALAAKEKEVKKLTDGLHGLQE 364
Score = 53 (23.7 bits), Expect = 1.6e-14, Sum P(4) = 1.6e-14
Identities = 17/63 (26%), Positives = 32/63 (50%)
Query: 362 AYEPPHDKIEKLGSQILELG-VQANQKRLQKSEKEKI-LNQNKLTLRQCSDRLKDMEDKN 419
+Y ++++ L I E N K +QK +EK +NK+ + ++R K+++D
Sbjct: 737 SYHKQQEELDALKKTIEESEETLKNTKEIQKKAEEKYEALENKMKNAE-AEREKELKDAQ 795
Query: 420 NKL 422
KL
Sbjct: 796 KKL 798
Score = 52 (23.4 bits), Expect = 7.4e-07, Sum P(2) = 7.4e-07
Identities = 20/92 (21%), Positives = 43/92 (46%)
Query: 160 KLSPVKLLEETEKAVGDP-QLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQE 218
K +K E + GD Q +Q + ++ +L ++ T++ + +TL K + + E
Sbjct: 711 KYRQLKQQWEMKTEEGDLLQTKLQQSSYHKQQEELDALKKTIEESEETLKNTKEIQKKAE 770
Query: 219 KDVERVRQR-----AELLEKVESMKKKLPWLK 245
+ E + + AE ++++ +KKL K
Sbjct: 771 EKYEALENKMKNAEAEREKELKDAQKKLDCAK 802
Score = 50 (22.7 bits), Expect = 3.1e-14, Sum P(4) = 3.1e-14
Identities = 14/59 (23%), Positives = 31/59 (52%)
Query: 377 ILELGVQANQKRLQKSEKE---KILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAE 432
+L+ +Q + Q+ E + K + +++ TL+ + K E+K L + ++N+ AE
Sbjct: 728 LLQTKLQQSSYHKQQEELDALKKTIEESEETLKNTKEIQKKAEEKYEALENKMKNAEAE 786
Score = 49 (22.3 bits), Expect = 3.2e-14, Sum P(3) = 3.2e-14
Identities = 15/57 (26%), Positives = 30/57 (52%)
Query: 383 QANQKRLQKS--EKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAENIFEA 437
+ +K L+K+ E K L + +++ +D L +++ +NK AL + A+ F A
Sbjct: 328 ETKRKELEKNMAEDSKALAAKEKEVKKLTDGLHGLQEASNKDAEAL--AAAQQHFNA 382
Score = 48 (22.0 bits), Expect = 2.0e-05, Sum P(4) = 2.0e-05
Identities = 45/179 (25%), Positives = 79/179 (44%)
Query: 644 QTEQRLIEDEAAKLQKERE-----EIINIVQIEKRKRREM----ENHINLRKRKLESIEK 694
+ E+ + ED A KE+E + ++ +Q K E + H N L S
Sbjct: 333 ELEKNMAEDSKALAAKEKEVKKLTDGLHGLQEASNKDAEALAAAQQHFNAVSAGLSS--N 390
Query: 695 EDDINTALA-KLVDQAADLNIQQF--KYA-IEIKNLLVEIVSCKWSYAEKHMASIEFDAK 750
ED LA +++ D++ Q K A +++K+ E+ + K + K + + D +
Sbjct: 391 EDGAEATLAGQMMACKNDISKAQTGAKQAQMKLKHAQQELKN-KQAEVRKMDSGYKKDQE 449
Query: 751 IRELEFNLKQHEKLALQAS-LHYEDCKKE--VEHCR---KHLSDAKRQAESIAFITPEL 803
E +K EKL + L+YED K+E +E R + +S+ K E++ P L
Sbjct: 450 AFEAVKKVK--EKLETEMKKLNYEDNKEERLLEKHRQVSRDISNLKGTYEALLAKFPNL 506
Score = 46 (21.3 bits), Expect = 7.8e-15, Sum P(4) = 7.8e-15
Identities = 14/51 (27%), Positives = 24/51 (47%)
Query: 404 TLRQCSDRLKDMEDKNNKLLHALRNSGAENIFEAYCWLQQHRHELNKEAYG 454
T + + LK+M+DK KL L + + I C +++ +KE G
Sbjct: 245 TKERSAGELKEMQDKILKLQEVL-SENEKKIKALNCEIEELEKRKDKETGG 294
Score = 44 (20.5 bits), Expect = 1.6e-14, Sum P(4) = 1.6e-14
Identities = 14/45 (31%), Positives = 22/45 (48%)
Query: 209 QLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAEY 253
+LK E K ++ E E V+ +K+KL + +MKK Y
Sbjct: 429 ELKNKQAEVRKMDSGYKKDQEAFEAVKKVKEKL---ETEMKKLNY 470
Score = 44 (20.5 bits), Expect = 1.0e-13, Sum P(3) = 1.0e-13
Identities = 27/107 (25%), Positives = 42/107 (39%)
Query: 473 DHVGH-YIWKSFI-TQDAGDRDFLAKNLKPFDVPILNY--VSNESSRK--------EPFQ 520
+H+ YI F+ +D +R A LK IL V +E+ +K E +
Sbjct: 228 EHLSRLYIAYQFLLAEDTKERS--AGELKEMQDKILKLQEVLSENEKKIKALNCEIEELE 285
Query: 521 ISEEMRALGISARLDQVFDAPHAVKEVLISQFGLDSSYIGSKETDQK 567
++ GI L+ F V S F L + S+ET +K
Sbjct: 286 KRKDKETGGILRSLEDAFAEAQRVNTKSQSAFDLKKKNLASEETKRK 332
Score = 39 (18.8 bits), Expect = 2.9e-06, Sum P(3) = 2.9e-06
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 426 LRNSGAENIFEAYCWL 441
L SG NI ++ C+L
Sbjct: 33 LNGSGKSNILDSICFL 48
Score = 39 (18.8 bits), Expect = 2.9e-06, Sum P(3) = 2.9e-06
Identities = 25/111 (22%), Positives = 50/111 (45%)
Query: 125 KVVPKGE--VLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQ 182
K + K E + EI ++ Q L ++R + L K++ E E +L +
Sbjct: 183 KTIEKKEAKLKEIKTILEEEITPTIQKLKEERS---SYLEYQKVMREIEHL---SRLYIA 236
Query: 183 HCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEK 233
+ L+ + +K ++ +K D + +L+ + E EK ++ + E LEK
Sbjct: 237 YQFLLAEDTKERSAG-ELKEMQDKILKLQEVLSENEKKIKALNCEIEELEK 286
>GENEDB_PFALCIPARUM|PFD0685c [details] [associations]
symbol:PFD0685c "chromosome associated protein,
putative" species:5833 "Plasmodium falciparum" [GO:0000228 "nuclear
chromosome" evidence=ISS] InterPro:IPR010935 Pfam:PF06470
SMART:SM00968 InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524
GO:GO:0051301 GO:GO:0006275 GO:GO:0000785 HSSP:P58301 GO:GO:0000070
EMBL:AL844503 GO:GO:0003680 eggNOG:COG1196 SUPFAM:SSF75553
GenomeReviews:AL844503_GR GO:GO:0034990 KO:K06669
RefSeq:XP_001351448.1 ProteinModelPortal:Q8I1U7 IntAct:Q8I1U7
MINT:MINT-1568808 PRIDE:Q8I1U7 EnsemblProtists:PFD0685c:mRNA
GeneID:812569 KEGG:pfa:PFD0685c EuPathDB:PlasmoDB:PF3D7_0414000
HOGENOM:HOG000282685 OMA:CASTINS ProtClustDB:CLSZ2514476
Uniprot:Q8I1U7
Length = 1193
Score = 152 (58.6 bits), Expect = 1.1e-14, Sum P(3) = 1.1e-14
Identities = 89/399 (22%), Positives = 184/399 (46%)
Query: 643 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTAL 702
+ E + +++E K++ E ++ N +++ +KR E ++ I + + E ++ D+ N L
Sbjct: 785 LNDEVKKLKEELNKIRNEYDDFKNKLELLYQKRNENDSSIYMEE--YEDVDI-DEYNNDL 841
Query: 703 AKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQ-H 761
A D + + ++ Y +I+ + E+ + K S + + + KI +L + Q +
Sbjct: 842 ADKKDHSDKIEKEKIHYEQKIREINKEMENVKSSIDKILINEKKHKKKILDLCHQMNQIN 901
Query: 762 EKLALQASLHYEDCKKEV------EHCRKHLSDAKRQAES-IAFITPELEKEFLEMPTTI 814
E+L + KK+V + ++ + K+Q + + +T EL+K + +
Sbjct: 902 EELRILEGKEENIRKKKVLLPQGIQELEEYRTYDKQQLSAKLKSVTMELKKY-----SNV 956
Query: 815 EELEAAIQDNI--SQANSIFFLNQNILQEYEHRQRQIEDLSTKQ----EADKKELKRFLA 868
E +A + NI + N + ++ I +++ + I+ + K+ EA ++ ++ +
Sbjct: 957 NE-KAGDRLNILMNDFNELKKRHEEINSSHKNIKDMIQHIGKKKDEALEATYVKINKYFS 1015
Query: 869 EIDALKEKWLPTLRNLVAQ-INET-FSRNFQEMA---VAGEVSLDEHESDFDKF-GILIK 922
E +L K +LV + +NE + QEM+ + + +DE E DK GI I
Sbjct: 1016 EYFSLLFK--NRKASLVLKKMNEKEYKEKLQEMSEKRIKRRI-IDE-EVYIDKITGISIN 1071
Query: 923 VKFRQSGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMF 982
+ ++ + SGGERS+ I + L + N F DEI+ +D I+ R
Sbjct: 1072 ITSNDDEKM-TYTIQELSGGERSIVAICLFLCLNKIDNFSFFFFDEIDAALDTIH-RDNL 1129
Query: 983 QQLVRAASQPNTPQCFLLTPKLLPDLEYSEACSILNIMN 1021
L++ + T F++T LEYS+ I+ I++
Sbjct: 1130 SLLLKELAHRGTQ--FIITTFRKELLEYSDNMYIVKIVD 1166
Score = 120 (47.3 bits), Expect = 1.1e-14, Sum P(3) = 1.1e-14
Identities = 49/212 (23%), Positives = 97/212 (45%)
Query: 23 IIEIELHNFMTFDHLICKPGSR-LNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSIG 81
I +I L F T+ + +R +N ++G NGSGKS+++ AI L + + +
Sbjct: 3 IKQIRLKGFRTYKNETTIDFTRGINCIVGFNGSGKSNILLAIEFILSDVCEY--KQIYLH 60
Query: 82 AYVKRGEESGYIKISLRGDTKEEHLTI-------MRKIDTRNKSEWFFNGKVVPKGEVLE 134
+ + Y++I D E++ ++ ++K+ K E F N K + K + +E
Sbjct: 61 EGIGNAVRNCYVEIIF--DNSEKYFSMFKESEIKIKKVLENMKCEIFVNDKNISKNQYVE 118
Query: 135 ITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVG----DPQLPVQHCALVEKS 190
+ + + +NNL + Q ++ + + + ++L + +G + + L E
Sbjct: 119 LLESCGLCINNLYNIIKQGQIIKLSNMKDEEILNYLKSILGAKIFEEKKKDALSMLKECD 178
Query: 191 SKLKTIECTVKRNGDTLNQLKALNVEQEKDVE 222
SK TIE K D ++L++L E E +E
Sbjct: 179 SKKVTIE---KEFNDMNSKLESLQEEFENFLE 207
Score = 86 (35.3 bits), Expect = 5.7e-07, Sum P(3) = 5.7e-07
Identities = 37/202 (18%), Positives = 95/202 (47%)
Query: 650 IEDEAAKLQKEREEIINIVQIEK------RKRREMENHINLRKRKLESIEKEDDINTALA 703
I+++ K + + I NI QI + K + +++ I +++++E+ K ++IN L+
Sbjct: 308 IKEKNIKESQNKNRIKNINQINEFILRVNEKLQSLKSDIVSKEKQIEN--KNNEINMLLS 365
Query: 704 KLVDQAADLNIQQFKYAIE--IKNLLVEI--VSCKWSYAEKHMASIEFDAKIRELEFNLK 759
K ++ D N IE I ++ +E+ + + EK++ +E ++K+ L ++K
Sbjct: 366 KNKNKNTDANYSHNVKKIEKMINDINIELSFLEKETIKNEKYLKELEEESKV--LNKSIK 423
Query: 760 QHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEA 819
++E L+ + + + E C + +++ E++ + +E+ +E+
Sbjct: 424 ENETLSQKYGSEINELNNKSEKCVEQKRQCQQKISEGTTNLNEIKCQIIEVNDKYDEIIK 483
Query: 820 AIQDNISQANSIFFLNQNILQE 841
+ I + + ++I +E
Sbjct: 484 SSNKEILKIVDLIMAEKSIKRE 505
Score = 79 (32.9 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 50/261 (19%), Positives = 116/261 (44%)
Query: 645 TEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDD-INTALA 703
T ++ D +KL+ +EE N ++ +K ++ ++ L + ++I +E + + L
Sbjct: 183 TIEKEFNDMNSKLESLQEEFENFLEYKKLEKEKVHLDYFLNEINYKNIYEETQMLKSKLQ 242
Query: 704 KLVDQAAD----LNIQ---QFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEF 756
+L ++ D LN+ + +Y ++ + +EI SC+ ++ K +I D + +
Sbjct: 243 ELKNKTQDEDNHLNLSNNNKSEYNEKLNKMKLEIASCQ-NHLNK---TISEDIQNKR--- 295
Query: 757 NLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEE 816
N+ H ++ + + ++ K+ + + + + E I + +L+ + + I
Sbjct: 296 NIV-HLQMLIDEKIKEKNIKESQN--KNRIKNINQINEFILRVNEKLQS----LKSDIVS 348
Query: 817 LEAAIQDNISQANSIFFLNQNILQE--YEHRQRQIEDLSTKQEADKKELKRFLAEIDALK 874
E I++ ++ N + N+N + Y H ++IE + EL FL +
Sbjct: 349 KEKQIENKNNEINMLLSKNKNKNTDANYSHNVKKIEKMINDINI---ELS-FLEKETIKN 404
Query: 875 EKWLPTLRNLVAQINETFSRN 895
EK+L L +N++ N
Sbjct: 405 EKYLKELEEESKVLNKSIKEN 425
Score = 75 (31.5 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 46/213 (21%), Positives = 93/213 (43%)
Query: 658 QKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAA-DLNIQQ 716
+ E E +N +++E +NH+N K E I+ + +I L L+D+ + NI++
Sbjct: 262 KSEYNEKLNKMKLEIAS---CQNHLN--KTISEDIQNKRNI-VHLQMLIDEKIKEKNIKE 315
Query: 717 FKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYEDCK 776
+ IKN+ +I EK + S++ D +E + K +E L + ++
Sbjct: 316 SQNKNRIKNIN-QINEFILRVNEK-LQSLKSDIVSKEKQIENKNNEINMLLSKNKNKNTD 373
Query: 777 KEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQ 836
H K + ++ I LEKE ++ ++ELE + N N+
Sbjct: 374 ANYSHNVKKI---EKMINDINIELSFLEKETIKNEKYLKELE----EESKVLNKSIKENE 426
Query: 837 NILQEYEHRQRQIEDLSTKQEADKKELKRFLAE 869
+ Q+Y ++ + S K K++ ++ ++E
Sbjct: 427 TLSQKYGSEINELNNKSEKCVEQKRQCQQKISE 459
Score = 62 (26.9 bits), Expect = 1.8e-05, Sum P(3) = 1.8e-05
Identities = 55/243 (22%), Positives = 100/243 (41%)
Query: 643 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTAL 702
MQT ++++E K ++ + N + K + +N++K + + +I L
Sbjct: 541 MQTAKKIVEFIEKKREERTSKEFNFKEFYFGKLTIVPL-LNIKKFNEFNYPNDKNI-VPL 598
Query: 703 AKLVDQAADLNIQQFKYAIEIKNLLVE-IVSCKWSYAEKHMASIEFDAK-IRELEFNLKQ 760
K V+ + I +F I K ++V+ + SC+ +Y E + + D + + F
Sbjct: 599 IKCVNYNS--KIYEFLKNILFKTIIVKSLESCE-NYLEDNYNCVNIDGDYLSKHGFMYGG 655
Query: 761 HEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAA 820
+ K Y K+ E +K S + +I I EL + +T+ +
Sbjct: 656 YNKKKYGIYTVYNKLKELKEEEKKEKSHIEELNNNIEKIDDELRNIYDTKSSTVAKKNGC 715
Query: 821 IQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPT 880
S NSI N NI E+ + E ++ QE K+ L++ D LK + L
Sbjct: 716 A----STINSI---NNNIYSNEENIRLTSEKINYIQEK-KQNLEQHK---DQLKMQILQ- 763
Query: 881 LRN 883
LRN
Sbjct: 764 LRN 766
Score = 59 (25.8 bits), Expect = 1.1e-14, Sum P(3) = 1.1e-14
Identities = 25/99 (25%), Positives = 47/99 (47%)
Query: 369 KIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRL-----KDMEDKNNKLL 423
K+++L ++ + N KSE + LN+ KL + C + L +D+++K N ++
Sbjct: 240 KLQELKNKTQDEDNHLNLSNNNKSEYNEKLNKMKLEIASCQNHLNKTISEDIQNKRN-IV 298
Query: 424 HALRNSGAENIFEAYCWLQQHRHEL-NKEAYGPVLLEVN 461
H L+ E I E Q+++ + N +L VN
Sbjct: 299 H-LQMLIDEKIKEKNIKESQNKNRIKNINQINEFILRVN 336
Score = 52 (23.4 bits), Expect = 5.9e-14, Sum P(3) = 5.9e-14
Identities = 21/107 (19%), Positives = 52/107 (48%)
Query: 371 EKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSG 430
+K GS+I EL ++ + QK + ++ +++ L + ++ ++ DK ++++ ++S
Sbjct: 430 QKYGSEINELNNKSEKCVEQKRQCQQKISEGTTNLNEIKCQIIEVNDKYDEII---KSSN 486
Query: 431 AENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSN---RAHANYLEDH 474
E I + + + + G ++ +NV +A LE+H
Sbjct: 487 KE-ILKIVDLIMAEKSIKRENILGFLIDNINVDKTYVKAVDTILENH 532
Score = 50 (22.7 bits), Expect = 4.4e-14, Sum P(4) = 4.4e-14
Identities = 32/130 (24%), Positives = 49/130 (37%)
Query: 200 VKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAEYIXXXXX 259
+ R + L LK+ V +EK +E +L K +++KK E +
Sbjct: 332 ILRVNEKLQSLKSDIVSKEKQIENKNNEINMLLSKNKNKNTDANYSHNVKKIEKMINDIN 391
Query: 260 XXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDC--KKLSSLINE-NSKRRMDFLEK- 315
N + E K K+I + + +K S INE N+K EK
Sbjct: 392 IELSFLEKETIKNEKYLKELEEESKVLNKSIKENETLSQKYGSEINELNNKS-----EKC 446
Query: 316 VDQGVQVQGK 325
V+Q Q Q K
Sbjct: 447 VEQKRQCQQK 456
Score = 50 (22.7 bits), Expect = 5.7e-07, Sum P(3) = 5.7e-07
Identities = 23/85 (27%), Positives = 37/85 (43%)
Query: 835 NQNILQEYEHR--QRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLVAQINETF 892
N N+ + + I L+ + + K+EL + E D K K L L + NE
Sbjct: 766 NNNVNPDESEKVGSTDINSLNDEVKKLKEELNKIRNEYDDFKNK----LELLYQKRNEND 821
Query: 893 SRNFQEMAVAGEVSLDEHESDF-DK 916
S + E +V +DE+ +D DK
Sbjct: 822 SSIYMEEYE--DVDIDEYNNDLADK 844
Score = 48 (22.0 bits), Expect = 4.4e-14, Sum P(4) = 4.4e-14
Identities = 18/73 (24%), Positives = 37/73 (50%)
Query: 382 VQANQKRLQ-KSEKEKILNQNKLTLRQCSDRLKD--MEDKNNKLL-HALRNSGAENIFEA 437
+ +N++ ++ SEK + + K L Q D+LK ++ +NN + G+ +I
Sbjct: 726 IYSNEENIRLTSEKINYIQEKKQNLEQHKDQLKMQILQLRNNNVNPDESEKVGSTDINSL 785
Query: 438 YCWLQQHRHELNK 450
+++ + ELNK
Sbjct: 786 NDEVKKLKEELNK 798
Score = 48 (22.0 bits), Expect = 7.0e-14, Sum P(4) = 7.0e-14
Identities = 11/44 (25%), Positives = 23/44 (52%)
Query: 208 NQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKA 251
N+LK L E++K+ + + +EK++ + + YD K +
Sbjct: 668 NKLKELKEEEKKEKSHIEELNNNIEKIDDELRNI----YDTKSS 707
>UNIPROTKB|Q8I1U7 [details] [associations]
symbol:PFD0685c "Structural maintenance of chromosomes
protein 3 homolog" species:36329 "Plasmodium falciparum 3D7"
[GO:0000070 "mitotic sister chromatid segregation" evidence=ISS]
[GO:0000228 "nuclear chromosome" evidence=ISS] [GO:0000785
"chromatin" evidence=ISS] [GO:0003680 "AT DNA binding"
evidence=ISS] [GO:0006275 "regulation of DNA replication"
evidence=ISS] [GO:0034990 "nuclear mitotic cohesin complex"
evidence=ISS] InterPro:IPR010935 Pfam:PF06470 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0051301
GO:GO:0006275 GO:GO:0000785 HSSP:P58301 GO:GO:0000070 EMBL:AL844503
GO:GO:0003680 eggNOG:COG1196 SUPFAM:SSF75553
GenomeReviews:AL844503_GR GO:GO:0034990 KO:K06669
RefSeq:XP_001351448.1 ProteinModelPortal:Q8I1U7 IntAct:Q8I1U7
MINT:MINT-1568808 PRIDE:Q8I1U7 EnsemblProtists:PFD0685c:mRNA
GeneID:812569 KEGG:pfa:PFD0685c EuPathDB:PlasmoDB:PF3D7_0414000
HOGENOM:HOG000282685 OMA:CASTINS ProtClustDB:CLSZ2514476
Uniprot:Q8I1U7
Length = 1193
Score = 152 (58.6 bits), Expect = 1.1e-14, Sum P(3) = 1.1e-14
Identities = 89/399 (22%), Positives = 184/399 (46%)
Query: 643 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTAL 702
+ E + +++E K++ E ++ N +++ +KR E ++ I + + E ++ D+ N L
Sbjct: 785 LNDEVKKLKEELNKIRNEYDDFKNKLELLYQKRNENDSSIYMEE--YEDVDI-DEYNNDL 841
Query: 703 AKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQ-H 761
A D + + ++ Y +I+ + E+ + K S + + + KI +L + Q +
Sbjct: 842 ADKKDHSDKIEKEKIHYEQKIREINKEMENVKSSIDKILINEKKHKKKILDLCHQMNQIN 901
Query: 762 EKLALQASLHYEDCKKEV------EHCRKHLSDAKRQAES-IAFITPELEKEFLEMPTTI 814
E+L + KK+V + ++ + K+Q + + +T EL+K + +
Sbjct: 902 EELRILEGKEENIRKKKVLLPQGIQELEEYRTYDKQQLSAKLKSVTMELKKY-----SNV 956
Query: 815 EELEAAIQDNI--SQANSIFFLNQNILQEYEHRQRQIEDLSTKQ----EADKKELKRFLA 868
E +A + NI + N + ++ I +++ + I+ + K+ EA ++ ++ +
Sbjct: 957 NE-KAGDRLNILMNDFNELKKRHEEINSSHKNIKDMIQHIGKKKDEALEATYVKINKYFS 1015
Query: 869 EIDALKEKWLPTLRNLVAQ-INET-FSRNFQEMA---VAGEVSLDEHESDFDKF-GILIK 922
E +L K +LV + +NE + QEM+ + + +DE E DK GI I
Sbjct: 1016 EYFSLLFK--NRKASLVLKKMNEKEYKEKLQEMSEKRIKRRI-IDE-EVYIDKITGISIN 1071
Query: 923 VKFRQSGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMF 982
+ ++ + SGGERS+ I + L + N F DEI+ +D I+ R
Sbjct: 1072 ITSNDDEKM-TYTIQELSGGERSIVAICLFLCLNKIDNFSFFFFDEIDAALDTIH-RDNL 1129
Query: 983 QQLVRAASQPNTPQCFLLTPKLLPDLEYSEACSILNIMN 1021
L++ + T F++T LEYS+ I+ I++
Sbjct: 1130 SLLLKELAHRGTQ--FIITTFRKELLEYSDNMYIVKIVD 1166
Score = 120 (47.3 bits), Expect = 1.1e-14, Sum P(3) = 1.1e-14
Identities = 49/212 (23%), Positives = 97/212 (45%)
Query: 23 IIEIELHNFMTFDHLICKPGSR-LNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSIG 81
I +I L F T+ + +R +N ++G NGSGKS+++ AI L + + +
Sbjct: 3 IKQIRLKGFRTYKNETTIDFTRGINCIVGFNGSGKSNILLAIEFILSDVCEY--KQIYLH 60
Query: 82 AYVKRGEESGYIKISLRGDTKEEHLTI-------MRKIDTRNKSEWFFNGKVVPKGEVLE 134
+ + Y++I D E++ ++ ++K+ K E F N K + K + +E
Sbjct: 61 EGIGNAVRNCYVEIIF--DNSEKYFSMFKESEIKIKKVLENMKCEIFVNDKNISKNQYVE 118
Query: 135 ITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVG----DPQLPVQHCALVEKS 190
+ + + +NNL + Q ++ + + + ++L + +G + + L E
Sbjct: 119 LLESCGLCINNLYNIIKQGQIIKLSNMKDEEILNYLKSILGAKIFEEKKKDALSMLKECD 178
Query: 191 SKLKTIECTVKRNGDTLNQLKALNVEQEKDVE 222
SK TIE K D ++L++L E E +E
Sbjct: 179 SKKVTIE---KEFNDMNSKLESLQEEFENFLE 207
Score = 86 (35.3 bits), Expect = 5.7e-07, Sum P(3) = 5.7e-07
Identities = 37/202 (18%), Positives = 95/202 (47%)
Query: 650 IEDEAAKLQKEREEIINIVQIEK------RKRREMENHINLRKRKLESIEKEDDINTALA 703
I+++ K + + I NI QI + K + +++ I +++++E+ K ++IN L+
Sbjct: 308 IKEKNIKESQNKNRIKNINQINEFILRVNEKLQSLKSDIVSKEKQIEN--KNNEINMLLS 365
Query: 704 KLVDQAADLNIQQFKYAIE--IKNLLVEI--VSCKWSYAEKHMASIEFDAKIRELEFNLK 759
K ++ D N IE I ++ +E+ + + EK++ +E ++K+ L ++K
Sbjct: 366 KNKNKNTDANYSHNVKKIEKMINDINIELSFLEKETIKNEKYLKELEEESKV--LNKSIK 423
Query: 760 QHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEA 819
++E L+ + + + E C + +++ E++ + +E+ +E+
Sbjct: 424 ENETLSQKYGSEINELNNKSEKCVEQKRQCQQKISEGTTNLNEIKCQIIEVNDKYDEIIK 483
Query: 820 AIQDNISQANSIFFLNQNILQE 841
+ I + + ++I +E
Sbjct: 484 SSNKEILKIVDLIMAEKSIKRE 505
Score = 79 (32.9 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 50/261 (19%), Positives = 116/261 (44%)
Query: 645 TEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDD-INTALA 703
T ++ D +KL+ +EE N ++ +K ++ ++ L + ++I +E + + L
Sbjct: 183 TIEKEFNDMNSKLESLQEEFENFLEYKKLEKEKVHLDYFLNEINYKNIYEETQMLKSKLQ 242
Query: 704 KLVDQAAD----LNIQ---QFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEF 756
+L ++ D LN+ + +Y ++ + +EI SC+ ++ K +I D + +
Sbjct: 243 ELKNKTQDEDNHLNLSNNNKSEYNEKLNKMKLEIASCQ-NHLNK---TISEDIQNKR--- 295
Query: 757 NLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEE 816
N+ H ++ + + ++ K+ + + + + E I + +L+ + + I
Sbjct: 296 NIV-HLQMLIDEKIKEKNIKESQN--KNRIKNINQINEFILRVNEKLQS----LKSDIVS 348
Query: 817 LEAAIQDNISQANSIFFLNQNILQE--YEHRQRQIEDLSTKQEADKKELKRFLAEIDALK 874
E I++ ++ N + N+N + Y H ++IE + EL FL +
Sbjct: 349 KEKQIENKNNEINMLLSKNKNKNTDANYSHNVKKIEKMINDINI---ELS-FLEKETIKN 404
Query: 875 EKWLPTLRNLVAQINETFSRN 895
EK+L L +N++ N
Sbjct: 405 EKYLKELEEESKVLNKSIKEN 425
Score = 75 (31.5 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 46/213 (21%), Positives = 93/213 (43%)
Query: 658 QKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAA-DLNIQQ 716
+ E E +N +++E +NH+N K E I+ + +I L L+D+ + NI++
Sbjct: 262 KSEYNEKLNKMKLEIAS---CQNHLN--KTISEDIQNKRNI-VHLQMLIDEKIKEKNIKE 315
Query: 717 FKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYEDCK 776
+ IKN+ +I EK + S++ D +E + K +E L + ++
Sbjct: 316 SQNKNRIKNIN-QINEFILRVNEK-LQSLKSDIVSKEKQIENKNNEINMLLSKNKNKNTD 373
Query: 777 KEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQ 836
H K + ++ I LEKE ++ ++ELE + N N+
Sbjct: 374 ANYSHNVKKI---EKMINDINIELSFLEKETIKNEKYLKELE----EESKVLNKSIKENE 426
Query: 837 NILQEYEHRQRQIEDLSTKQEADKKELKRFLAE 869
+ Q+Y ++ + S K K++ ++ ++E
Sbjct: 427 TLSQKYGSEINELNNKSEKCVEQKRQCQQKISE 459
Score = 62 (26.9 bits), Expect = 1.8e-05, Sum P(3) = 1.8e-05
Identities = 55/243 (22%), Positives = 100/243 (41%)
Query: 643 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTAL 702
MQT ++++E K ++ + N + K + +N++K + + +I L
Sbjct: 541 MQTAKKIVEFIEKKREERTSKEFNFKEFYFGKLTIVPL-LNIKKFNEFNYPNDKNI-VPL 598
Query: 703 AKLVDQAADLNIQQFKYAIEIKNLLVE-IVSCKWSYAEKHMASIEFDAK-IRELEFNLKQ 760
K V+ + I +F I K ++V+ + SC+ +Y E + + D + + F
Sbjct: 599 IKCVNYNS--KIYEFLKNILFKTIIVKSLESCE-NYLEDNYNCVNIDGDYLSKHGFMYGG 655
Query: 761 HEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAA 820
+ K Y K+ E +K S + +I I EL + +T+ +
Sbjct: 656 YNKKKYGIYTVYNKLKELKEEEKKEKSHIEELNNNIEKIDDELRNIYDTKSSTVAKKNGC 715
Query: 821 IQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPT 880
S NSI N NI E+ + E ++ QE K+ L++ D LK + L
Sbjct: 716 A----STINSI---NNNIYSNEENIRLTSEKINYIQEK-KQNLEQHK---DQLKMQILQ- 763
Query: 881 LRN 883
LRN
Sbjct: 764 LRN 766
Score = 59 (25.8 bits), Expect = 1.1e-14, Sum P(3) = 1.1e-14
Identities = 25/99 (25%), Positives = 47/99 (47%)
Query: 369 KIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRL-----KDMEDKNNKLL 423
K+++L ++ + N KSE + LN+ KL + C + L +D+++K N ++
Sbjct: 240 KLQELKNKTQDEDNHLNLSNNNKSEYNEKLNKMKLEIASCQNHLNKTISEDIQNKRN-IV 298
Query: 424 HALRNSGAENIFEAYCWLQQHRHEL-NKEAYGPVLLEVN 461
H L+ E I E Q+++ + N +L VN
Sbjct: 299 H-LQMLIDEKIKEKNIKESQNKNRIKNINQINEFILRVN 336
Score = 52 (23.4 bits), Expect = 5.9e-14, Sum P(3) = 5.9e-14
Identities = 21/107 (19%), Positives = 52/107 (48%)
Query: 371 EKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSG 430
+K GS+I EL ++ + QK + ++ +++ L + ++ ++ DK ++++ ++S
Sbjct: 430 QKYGSEINELNNKSEKCVEQKRQCQQKISEGTTNLNEIKCQIIEVNDKYDEII---KSSN 486
Query: 431 AENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSN---RAHANYLEDH 474
E I + + + + G ++ +NV +A LE+H
Sbjct: 487 KE-ILKIVDLIMAEKSIKRENILGFLIDNINVDKTYVKAVDTILENH 532
Score = 50 (22.7 bits), Expect = 4.4e-14, Sum P(4) = 4.4e-14
Identities = 32/130 (24%), Positives = 49/130 (37%)
Query: 200 VKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAEYIXXXXX 259
+ R + L LK+ V +EK +E +L K +++KK E +
Sbjct: 332 ILRVNEKLQSLKSDIVSKEKQIENKNNEINMLLSKNKNKNTDANYSHNVKKIEKMINDIN 391
Query: 260 XXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDC--KKLSSLINE-NSKRRMDFLEK- 315
N + E K K+I + + +K S INE N+K EK
Sbjct: 392 IELSFLEKETIKNEKYLKELEEESKVLNKSIKENETLSQKYGSEINELNNKS-----EKC 446
Query: 316 VDQGVQVQGK 325
V+Q Q Q K
Sbjct: 447 VEQKRQCQQK 456
Score = 50 (22.7 bits), Expect = 5.7e-07, Sum P(3) = 5.7e-07
Identities = 23/85 (27%), Positives = 37/85 (43%)
Query: 835 NQNILQEYEHR--QRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLVAQINETF 892
N N+ + + I L+ + + K+EL + E D K K L L + NE
Sbjct: 766 NNNVNPDESEKVGSTDINSLNDEVKKLKEELNKIRNEYDDFKNK----LELLYQKRNEND 821
Query: 893 SRNFQEMAVAGEVSLDEHESDF-DK 916
S + E +V +DE+ +D DK
Sbjct: 822 SSIYMEEYE--DVDIDEYNNDLADK 844
Score = 48 (22.0 bits), Expect = 4.4e-14, Sum P(4) = 4.4e-14
Identities = 18/73 (24%), Positives = 37/73 (50%)
Query: 382 VQANQKRLQ-KSEKEKILNQNKLTLRQCSDRLKD--MEDKNNKLL-HALRNSGAENIFEA 437
+ +N++ ++ SEK + + K L Q D+LK ++ +NN + G+ +I
Sbjct: 726 IYSNEENIRLTSEKINYIQEKKQNLEQHKDQLKMQILQLRNNNVNPDESEKVGSTDINSL 785
Query: 438 YCWLQQHRHELNK 450
+++ + ELNK
Sbjct: 786 NDEVKKLKEELNK 798
Score = 48 (22.0 bits), Expect = 7.0e-14, Sum P(4) = 7.0e-14
Identities = 11/44 (25%), Positives = 23/44 (52%)
Query: 208 NQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKA 251
N+LK L E++K+ + + +EK++ + + YD K +
Sbjct: 668 NKLKELKEEEKKEKSHIEELNNNIEKIDDELRNI----YDTKSS 707
>TAIR|locus:2167973 [details] [associations]
symbol:SMC2 "AT5G62410" species:3702 "Arabidopsis
thaliana" [GO:0005215 "transporter activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0005694 "chromosome" evidence=IEA] [GO:0051276
"chromosome organization" evidence=IEA] [GO:0000796 "condensin
complex" evidence=ISS] [GO:0000911 "cytokinesis by cell plate
formation" evidence=RCA] [GO:0006260 "DNA replication"
evidence=RCA] [GO:0006261 "DNA-dependent DNA replication"
evidence=RCA] [GO:0006270 "DNA replication initiation"
evidence=RCA] [GO:0006275 "regulation of DNA replication"
evidence=RCA] [GO:0006306 "DNA methylation" evidence=RCA]
[GO:0006342 "chromatin silencing" evidence=RCA] [GO:0006346
"methylation-dependent chromatin silencing" evidence=RCA]
[GO:0008283 "cell proliferation" evidence=RCA] [GO:0009909
"regulation of flower development" evidence=RCA] [GO:0010267
"production of ta-siRNAs involved in RNA interference"
evidence=RCA] [GO:0010389 "regulation of G2/M transition of mitotic
cell cycle" evidence=RCA] [GO:0016458 "gene silencing"
evidence=RCA] [GO:0016570 "histone modification" evidence=RCA]
[GO:0031047 "gene silencing by RNA" evidence=RCA] [GO:0031048
"chromatin silencing by small RNA" evidence=RCA] [GO:0034968
"histone lysine methylation" evidence=RCA] [GO:0035196 "production
of miRNAs involved in gene silencing by miRNA" evidence=RCA]
[GO:0048449 "floral organ formation" evidence=RCA] [GO:0051567
"histone H3-K9 methylation" evidence=RCA] [GO:0051607 "defense
response to virus" evidence=RCA] [GO:0051726 "regulation of cell
cycle" evidence=RCA] InterPro:IPR024704 InterPro:IPR010935
InterPro:IPR027120 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0005634
GO:GO:0007126 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0051301
GO:GO:0007067 GO:GO:0006281 GO:GO:0005215 GO:GO:0006310
GO:GO:0030261 EMBL:AB015469 EMBL:AB019235 GO:GO:0000796
GO:GO:0007062 eggNOG:COG1196 SUPFAM:SSF75553 KO:K06674
PANTHER:PTHR18937:SF9 EMBL:AF271730 EMBL:AF271731 EMBL:AF306547
IPI:IPI00534765 RefSeq:NP_201047.1 UniGene:At.19029 HSSP:P32908
ProteinModelPortal:Q9C5Y4 SMR:Q9C5Y4 STRING:Q9C5Y4 PaxDb:Q9C5Y4
PRIDE:Q9C5Y4 EnsemblPlants:AT5G62410.1 GeneID:836362
KEGG:ath:AT5G62410 TAIR:At5g62410 HOGENOM:HOG000163792
InParanoid:Q9C5Y4 OMA:CQNGKIP PhylomeDB:Q9C5Y4
ProtClustDB:CLSN2685173 Genevestigator:Q9C5Y4 Uniprot:Q9C5Y4
Length = 1175
Score = 146 (56.5 bits), Expect = 2.3e-14, Sum P(3) = 2.3e-14
Identities = 63/336 (18%), Positives = 151/336 (44%)
Query: 658 QKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAADLNIQQF 717
+ E+E+++ + K+++ +E+H+ + ++ ++ E D A + + D ++ +
Sbjct: 814 ENEKEKLVMEEEAMKQEQSSLESHLTSLETQISTLTSEVDEQRAKVDALQKIHDESLAEL 873
Query: 718 KYA-IEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYEDCK 776
K ++K +I S + EK + K+ +++ K+ E ++ ++DC
Sbjct: 874 KLIHAKMKECDTQI-SGFVTDQEKCLQ------KLSDMKLERKKLENEVVRMETDHKDCS 926
Query: 777 KEVEHC-RKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIFFLN 835
+V+ KH A + + + + E + E+LE D + N
Sbjct: 927 VKVDKLVEKHTWIASEK-QLFGKGGTDYDFESCDPYVAREKLEKLQSDQSGLEKRV---N 982
Query: 836 QNILQEYEHRQRQIEDLSTKQ---EADKKELKRFLAEIDALKEKWLPTLRNLVAQINETF 892
+ ++ +E + + L +K+ E DK ++ + + E+D K++ TL+ ++N+ F
Sbjct: 983 KKVMAMFEKAEDEYNALISKKNTIENDKSKITKVIEELDEKKKE---TLKVTWVKVNQDF 1039
Query: 893 SRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVLSAHHQSGGERSVSTILYL 952
F + L+ E G+ ++V F G++ S SGG+RS+ + +
Sbjct: 1040 GSIFSTLLPGTMAKLEPPEDGNFLDGLEVRVAF---GKVWKQSLSELSGGQRSLLALSLI 1096
Query: 953 VSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRA 988
++L P ++DE++ +D ++ + +++RA
Sbjct: 1097 LALLLFKPAPLYILDEVDAALD-LSHTQNIGRMIRA 1131
Score = 142 (55.0 bits), Expect = 2.3e-14, Sum P(3) = 2.3e-14
Identities = 65/304 (21%), Positives = 127/304 (41%)
Query: 22 NIIEIELHNFMTFDHLICKPG--SRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATS 79
+I EI L F ++ G N + G NGSGKS+++ +I LG RA +
Sbjct: 2 HIKEICLEGFKSYATRTVVSGFDPHFNAITGLNGSGKSNILDSICFVLGITNLQQVRAAN 61
Query: 80 IGAYVKRGEESGYIK--ISLRGDTKEEH-----------LTIMRKIDTRNKSEWFFNGKV 126
+ V + ++G K +S+ D E H +T+ R+I ++++ NGK+
Sbjct: 62 LQELVYKQGQAGITKATVSVTFDNSERHRSPLGYEEHPEITVTRQIVVGGRNKYLINGKL 121
Query: 127 VPKGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCAL 186
+V + + VNN + Q R+ + + P ++L E+A G + A
Sbjct: 122 AQPSQVQNLFHSVQLNVNNPHFLIMQGRITKVLNMKPPEILSMLEEAAGTRMYENKKEAA 181
Query: 187 VEKSSKLKTIECTVKR--NGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWL 244
++ K +T + + + + L L+ L E+ + ++ AEL +++ ++
Sbjct: 182 LKTLEKKQTKVDEINKLLDHEILPALEKLRKEKSQYMQWANGNAEL-DRLRRFCIAFEYV 240
Query: 245 KYD-MKKAEYIXXXXXXXXXXXXXXXXXNT---LHEFSKPIEGKKQEK-AILDGDCKKLS 299
+ + ++ + T + EF K I+ Q K A + G+ K LS
Sbjct: 241 QAEKIRDNAVLGVGEMKAKLGKIDAETEKTQEEIQEFEKQIKALTQAKEASMGGEVKTLS 300
Query: 300 SLIN 303
++
Sbjct: 301 EKVD 304
Score = 82 (33.9 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 43/194 (22%), Positives = 82/194 (42%)
Query: 662 EEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAADLNIQQFKYAI 721
E++ ++ Q R+ ++ N + + E++EK L K V + A + + A
Sbjct: 301 EKVDSLAQEMTRESSKLNNKEDTLLGEKENVEKIVHSIEDLKKSVKERAAAVKKSEEGAA 360
Query: 722 EIKNLLVEIVSCKWSYAEKHMASIEFDAKIRE---LEFNLKQHEKLAL-QASLHYEDCKK 777
++K E+ + ++H + + E LE L+ K+A+ A + K
Sbjct: 361 DLKQRFQELSTTLEECEKEHQGVLAGKSSGDEEKCLEDQLRD-AKIAVGTAGTELKQLKT 419
Query: 778 EVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQN 837
++EHC K L + K Q S E+E E +E ++ A++ + L ++
Sbjct: 420 KIEHCEKELKERKSQLMSKLEEAIEVENELGARKNDVEHVKKALESIPYNEGQMEALEKD 479
Query: 838 ILQEYEHRQRQIED 851
E E QR +ED
Sbjct: 480 RGAELEVVQR-LED 492
Score = 81 (33.6 bits), Expect = 8.9e-08, Sum P(3) = 8.9e-08
Identities = 54/226 (23%), Positives = 101/226 (44%)
Query: 652 DEAAKLQKEREEIINIVQIEKRKRREMENHIN-LR--KRKLESIEKEDDINTALAKLVDQ 708
D KL + E + +Q +++ ++E+ I L+ + K + + ++ T L +
Sbjct: 671 DRLRKLH-DLAEAESELQGHQKRLADVESQIKELQPLQMKFTDVYAQLELKTYDLSLFLK 729
Query: 709 AADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIE-FDAKIRELEFNLKQHEKLALQ 767
A+ N + K +K L E+ K EK +A FDA + +LE ++K H+K +
Sbjct: 730 RAEQN-EHHKLGEAVKKLEEELEEAKSQIKEKELAYKNCFDA-VSKLENSIKDHDKNR-E 786
Query: 768 ASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQ 827
L +D +K ++ + + A + +S E EKE L M EE EA Q+ S
Sbjct: 787 GRL--KDLEKNIKTIKAQMQAASKDLKS-----HENEKEKLVM----EE-EAMKQEQSSL 834
Query: 828 ANSIFFLNQNI---LQEYEHRQRQIEDLSTKQEADKKELKRFLAEI 870
+ + L I E + ++ +++ L + ELK A++
Sbjct: 835 ESHLTSLETQISTLTSEVDEQRAKVDALQKIHDESLAELKLIHAKM 880
Score = 71 (30.1 bits), Expect = 8.9e-07, Sum P(3) = 8.9e-07
Identities = 42/193 (21%), Positives = 87/193 (45%)
Query: 647 QRLIED-EAAKLQKEREEII--NIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALA 703
++L E+ E AK Q + +E+ N + +++H R+ +L+ +EK +I T A
Sbjct: 744 KKLEEELEEAKSQIKEKELAYKNCFDAVSKLENSIKDHDKNREGRLKDLEK--NIKTIKA 801
Query: 704 KLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIE---------FDAKIREL 754
++ QAA +++ + E + E + + S E H+ S+E D + ++
Sbjct: 802 QM--QAASKDLKSHENEKEKLVMEEEAMKQEQSSLESHLTSLETQISTLTSEVDEQRAKV 859
Query: 755 EFNLKQH-EKLALQASLH--YEDCKKEV-------EHCRKHLSDAKRQAESIAFITPELE 804
+ K H E LA +H ++C ++ E C + LSD K + + + +E
Sbjct: 860 DALQKIHDESLAELKLIHAKMKECDTQISGFVTDQEKCLQKLSDMKLERKKLENEVVRME 919
Query: 805 KEFLEMPTTIEEL 817
+ + +++L
Sbjct: 920 TDHKDCSVKVDKL 932
Score = 68 (29.0 bits), Expect = 8.4e-09, Sum P(4) = 8.4e-09
Identities = 22/93 (23%), Positives = 50/93 (53%)
Query: 647 QRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLV 706
++ +++ ++L + EE I V+ E R+ H+ K+ LESI + AL K
Sbjct: 425 EKELKERKSQLMSKLEEAIE-VENELGARKNDVEHV---KKALESIPYNEGQMEALEK-- 478
Query: 707 DQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAE 739
D+ A+L + Q + +++ L ++ + +++Y++
Sbjct: 479 DRGAELEVVQ-RLEDKVRGLSAQLANFQFTYSD 510
Score = 67 (28.6 bits), Expect = 8.4e-09, Sum P(4) = 8.4e-09
Identities = 38/195 (19%), Positives = 77/195 (39%)
Query: 751 IRELEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAE----SIAFITPELEK- 805
+ E E L+ H+K E KE++ + +D Q E ++ E+
Sbjct: 679 LAEAESELQGHQKRLADV----ESQIKELQPLQMKFTDVYAQLELKTYDLSLFLKRAEQN 734
Query: 806 EFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKR 865
E ++ +++LE +++ SQ +N + I+D +E K+L++
Sbjct: 735 EHHKLGEAVKKLEEELEEAKSQIKEKELAYKNCFDAVSKLENSIKDHDKNREGRLKDLEK 794
Query: 866 FLAEIDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVS-LDEHESDFD-KFGILIKV 923
I +K + ++L + NE +E A+ E S L+ H + + + L
Sbjct: 795 ---NIKTIKAQMQAASKDLKSHENEKEKLVMEEEAMKQEQSSLESHLTSLETQISTLTSE 851
Query: 924 KFRQSGQLEVLSAHH 938
Q +++ L H
Sbjct: 852 VDEQRAKVDALQKIH 866
Score = 65 (27.9 bits), Expect = 7.2e-07, Sum P(2) = 7.2e-07
Identities = 34/138 (24%), Positives = 65/138 (47%)
Query: 762 EKLALQASLH-YEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAA 820
EK ++ +H ED KK V ++ + K+ E A +L++ F E+ TT+EE E
Sbjct: 327 EKENVEKIVHSIEDLKKSV---KERAAAVKKSEEGAA----DLKQRFQELSTTLEECEKE 379
Query: 821 IQDNISQANSIFFLNQNILQEYEHRQR--------QIEDLSTKQEADKKELKRFLAEIDA 872
Q ++ +S + L++ + +++ L TK E +KELK +++ +
Sbjct: 380 HQGVLAGKSSGD--EEKCLEDQLRDAKIAVGTAGTELKQLKTKIEHCEKELKERKSQLMS 437
Query: 873 LKEKWLPTLRNLVAQINE 890
E+ + L A+ N+
Sbjct: 438 KLEEAIEVENELGARKND 455
Score = 57 (25.1 bits), Expect = 2.2e-05, Sum P(3) = 2.2e-05
Identities = 36/195 (18%), Positives = 90/195 (46%)
Query: 644 QTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALA 703
+ E+ ++E+EA K ++ E ++ +E + + + ++ ++ K+++++K D + A
Sbjct: 816 EKEKLVMEEEAMKQEQSSLES-HLTSLETQIST-LTSEVDEQRAKVDALQKIHDESLAEL 873
Query: 704 KLVD-QAADLNIQQFKYAIEIKNLLVEIVSCKWSYA--EKHMASIEFDAKIRELEFN--L 758
KL+ + + + Q + + + L ++ K E + +E D K ++ + +
Sbjct: 874 KLIHAKMKECDTQISGFVTDQEKCLQKLSDMKLERKKLENEVVRMETDHKDCSVKVDKLV 933
Query: 759 KQHEKLALQASLHYED-CKKEVEHCRKHLSDAKRQAESIAFITPELEKEF-LEMPTTIEE 816
++H +A + L + + E C ++ A+ + E + LEK ++ E+
Sbjct: 934 EKHTWIASEKQLFGKGGTDYDFESCDPYV--AREKLEKLQSDQSGLEKRVNKKVMAMFEK 991
Query: 817 LEAAIQDNISQANSI 831
E IS+ N+I
Sbjct: 992 AEDEYNALISKKNTI 1006
Score = 43 (20.2 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 27/134 (20%), Positives = 56/134 (41%)
Query: 368 DKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALR 427
+K+EKL S L + N+K + EK + N L ++ + +++ + K K++ L
Sbjct: 965 EKLEKLQSDQSGLEKRVNKKVMAMFEKAED-EYNALISKK--NTIENDKSKITKVIEELD 1021
Query: 428 NSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAH-ANYLEDHVGH-YIWKSFIT 485
E + + + Q + + ++ + + LE V +WK ++
Sbjct: 1022 EKKKETLKVTWVKVNQDFGSIFSTLLPGTMAKLEPPEDGNFLDGLEVRVAFGKVWKQSLS 1081
Query: 486 Q-DAGDRDFLAKNL 498
+ G R LA +L
Sbjct: 1082 ELSGGQRSLLALSL 1095
Score = 42 (19.8 bits), Expect = 0.00032, Sum P(3) = 0.00032
Identities = 24/94 (25%), Positives = 45/94 (47%)
Query: 152 QDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLK 211
Q+ + EF K +K L + ++A ++ L EK L E T R LN +
Sbjct: 271 QEEIQEFEK--QIKALTQAKEASMGGEVKT----LSEKVDSLAQ-EMT--RESSKLNNKE 321
Query: 212 ALNVEQEKDVERVRQRAELLEKVESMKKKLPWLK 245
+ ++++VE++ E L+K S+K++ +K
Sbjct: 322 DTLLGEKENVEKIVHSIEDLKK--SVKERAAAVK 353
Score = 40 (19.1 bits), Expect = 2.3e-14, Sum P(3) = 2.3e-14
Identities = 14/65 (21%), Positives = 31/65 (47%)
Query: 368 DKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALR 427
+ +EK+ I +L ++ + E+ K ++ S L++ E ++ +L A +
Sbjct: 329 ENVEKIVHSIEDLKKSVKERAAAVKKSEEGAADLKQRFQELSTTLEECEKEHQGVL-AGK 387
Query: 428 NSGAE 432
+SG E
Sbjct: 388 SSGDE 392
Score = 39 (18.8 bits), Expect = 2.9e-14, Sum P(3) = 2.9e-14
Identities = 12/46 (26%), Positives = 21/46 (45%)
Query: 372 KLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMED 417
KLG + +L + + + Q EKE L + C D + +E+
Sbjct: 738 KLGEAVKKLEEELEEAKSQIKEKE-------LAYKNCFDAVSKLEN 776
Score = 38 (18.4 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 7/25 (28%), Positives = 13/25 (52%)
Query: 417 DKNNKLLHALRNSGAENIFEAYCWL 441
D + + L SG NI ++ C++
Sbjct: 24 DPHFNAITGLNGSGKSNILDSICFV 48
>ZFIN|ZDB-GENE-030131-105 [details] [associations]
symbol:smc2 "structural maintenance of chromosomes
2" species:7955 "Danio rerio" [GO:0030261 "chromosome condensation"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0007062
"sister chromatid cohesion" evidence=IEA] [GO:0051276 "chromosome
organization" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0007076 "mitotic chromosome condensation" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006310 "DNA
recombination" evidence=IEA] [GO:0000796 "condensin complex"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR024704 InterPro:IPR010935 InterPro:IPR027120
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 ZFIN:ZDB-GENE-030131-105 GO:GO:0005524 GO:GO:0005634
GO:GO:0005694 GO:GO:0006281 GO:GO:0006310 GO:GO:0030261
GO:GO:0007062 SUPFAM:SSF75553 GeneTree:ENSGT00550000074857
PANTHER:PTHR18937:SF9 EMBL:BX548248 IPI:IPI00500731
Ensembl:ENSDART00000008616 ArrayExpress:F1R0P1 Bgee:F1R0P1
Uniprot:F1R0P1
Length = 1232
Score = 138 (53.6 bits), Expect = 1.5e-13, Sum P(3) = 1.5e-13
Identities = 74/345 (21%), Positives = 147/345 (42%)
Query: 652 DEAAKLQKEREEIINIVQIE----KRKRREMENHINLRKRKLESIEKEDDINTALAKLVD 707
D +K KE+++ + V +E KR++ E I L++++++ D T
Sbjct: 808 DAFSKRLKEKQQEADAVALELEELKREQAGYEQQIQAVDEALKAVQEQIDNMTTEVSANK 867
Query: 708 QAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKH-MASIEFDA--KIRELEFNLKQHEKL 764
+A + + Q K + + + ++ + K E + + DA KI+ELE N+ +H+K
Sbjct: 868 EA--VRVAQEKLSQQKEVIMGQEREIKGKSGEANRLREQNNDAQLKIKELEHNISKHKKD 925
Query: 765 ALQASLHYEDCKKEVE--HCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQ 822
+ A+ E + KHL A P KE + +EE + ++
Sbjct: 926 SADATAKVARMLAENDWISSEKHLFGQPNTAYDFKTNNP---KEAGQRLKRLEETKDKLE 982
Query: 823 DNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLR 882
N+++ N+L E E R ++ E DK ++ + E+D K + L
Sbjct: 983 RNVNRRA------MNMLSEAEERYNDLKKKKRIVENDKAKILETIEELDQKKNEAL---- 1032
Query: 883 NLVAQ-INETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQS-GQLEVLSAHHQS 940
N+ Q +N+ F F + L E G+L ++F+ + G + S
Sbjct: 1033 NVAWQKVNKDFGSIFSTLLPGANARLAPPEG----CGVLDGLEFKVALGNTWKENLTELS 1088
Query: 941 GGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQL 985
GG+RS+ + ++++ P ++DE++ +D + + + Q L
Sbjct: 1089 GGQRSLVALSLILAMLLFKPAPIYILDEVDAALDLSHTQNIGQML 1133
Score = 119 (46.9 bits), Expect = 1.5e-13, Sum P(3) = 1.5e-13
Identities = 54/209 (25%), Positives = 98/209 (46%)
Query: 46 NLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSIGAYVKRGEESGYIK--ISLRGDTK- 102
N + G NGSGKS+++ +I LG RAT++ V + +G K +S+ D
Sbjct: 28 NAITGLNGSGKSNILDSICFLLGISNLSQVRATNLQDLVYKNGLAGITKATVSITFDNSN 87
Query: 103 --------EEH--LTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQFLPQ 152
E H +TI R++ ++++ NG V ++ + VNN + Q
Sbjct: 88 KKQSPLGFETHDEITITRQVVIGGRNKYLINGVNANNLRVQDLFCSVGLNVNNPHFLIMQ 147
Query: 153 DRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKA 212
R+ + + P ++L E+A G + C +K S KTIE K++ L +++
Sbjct: 148 GRITKVLNMKPPEILAMIEEAAGTR---MYEC---KKISAQKTIE---KKDAK-LKEIQT 197
Query: 213 -LNVEQEKDVERVRQ-RAELLEKVESMKK 239
L+ E +E++++ RA LE + M++
Sbjct: 198 ILDEEITPAMEKLKEERASYLEYQKLMRE 226
Score = 82 (33.9 bits), Expect = 5.0e-06, Sum P(3) = 5.0e-06
Identities = 46/255 (18%), Positives = 113/255 (44%)
Query: 676 REMENHINLRKRKLESIEKEDDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKW 735
+++++ + ++ +L ++E E L+ L A + +Q K +++K I+ K
Sbjct: 682 KDIQDSLRNKEAELSAVESE------LSGLKGTAEKIRYRQLKQQLDLKTEEARILETKL 735
Query: 736 SYAEKHMASIEFD---AKIRELEFNLKQHEKLALQASLHYE-----------DCKKEVEH 781
+ H E + I E E L++ +++ +A Y + +KE++
Sbjct: 736 QQSSFHKQQEELENLRKTIEECEDTLQKTKEVQKKAEEKYNVLENKMKNAAAEREKELKA 795
Query: 782 CRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQE 841
++ L+ AK +A++ + E ++E + +EEL+ ++ I Q + +
Sbjct: 796 AQQKLNQAKSKADAFSKRLKEKQQEADAVALELEELK---REQAGYEQQI----QAVDEA 848
Query: 842 YEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEMAV 901
+ Q QI++++T+ A+K+ ++ ++ KE + R + + E + +E
Sbjct: 849 LKAVQEQIDNMTTEVSANKEAVRVAQEKLSQQKEVIMGQEREIKGKSGE--ANRLREQNN 906
Query: 902 AGEVSLDEHESDFDK 916
++ + E E + K
Sbjct: 907 DAQLKIKELEHNISK 921
Score = 67 (28.6 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 29/142 (20%), Positives = 65/142 (45%)
Query: 651 EDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESI--EKEDDINTALAKLVDQ 708
++E L+K EE + +Q K +++ E N+ + K+++ E+E ++ A KL +Q
Sbjct: 744 QEELENLRKTIEECEDTLQKTKEVQKKAEEKYNVLENKMKNAAAEREKELKAAQQKL-NQ 802
Query: 709 AADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQA 768
A F ++ K + V+ + ++ A ++ +I+ ++ LK ++
Sbjct: 803 AKS-KADAFSKRLKEKQQEADAVALELEELKREQAG--YEQQIQAVDEALKAVQEQIDNM 859
Query: 769 SLHYEDCKKEVEHCRKHLSDAK 790
+ K+ V ++ LS K
Sbjct: 860 TTEVSANKEAVRVAQEKLSQQK 881
Score = 64 (27.6 bits), Expect = 1.5e-13, Sum P(3) = 1.5e-13
Identities = 28/103 (27%), Positives = 49/103 (47%)
Query: 375 SQILELGVQANQKRLQKSEKE---KILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGA 431
++ILE +Q + Q+ E E K + + + TL++ + K E+K N L + ++N+ A
Sbjct: 728 ARILETKLQQSSFHKQQEELENLRKTIEECEDTLQKTKEVQKKAEEKYNVLENKMKNAAA 787
Query: 432 ENIFEAYCWLQQHRHELNK-EAYGPVLLEVNVSNRAHANYLED 473
E E Q+ +K +A+ L E A A LE+
Sbjct: 788 EREKELKAAQQKLNQAKSKADAFSKRLKEKQQEADAVALELEE 830
Score = 46 (21.3 bits), Expect = 1.0e-11, Sum P(3) = 1.0e-11
Identities = 14/54 (25%), Positives = 30/54 (55%)
Query: 386 QKRLQKS--EKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAENIFEA 437
+K L K+ E +K+++ + + + +RLK ++++ K AL A+ F+A
Sbjct: 331 RKELVKNMEEDKKVMSAKEAEVAKAVERLKAVKEEGQKDAEALE--AAQQHFKA 382
Score = 45 (20.9 bits), Expect = 4.3e-06, Sum P(3) = 4.3e-06
Identities = 19/86 (22%), Positives = 43/86 (50%)
Query: 167 LEETEKAVGDPQLPVQHCA--LVEKSSKLKTIECTVKRNGDT---LNQ-LKALNVEQEK- 219
+ + E Q+ ++H L K +++K ++ K++ DT +N+ ++ L E +K
Sbjct: 409 ISKAETEAKQAQMKLKHAQQELKTKQAQVKKMDSGYKKDQDTFEAVNKCIEKLQAEMKKL 468
Query: 220 DVERVRQRAELLEKVESMKKKLPWLK 245
+ E R+ LLE+ +++ L+
Sbjct: 469 NYEDGREEC-LLEQKRQFSREVIQLR 493
Score = 45 (20.9 bits), Expect = 4.3e-06, Sum P(3) = 4.3e-06
Identities = 38/171 (22%), Positives = 73/171 (42%)
Query: 85 KRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVN 144
+R +E G + LR T EE L+ +++DT+ +S + K + + TK+ V
Sbjct: 287 RRDKEVGGV---LR--TLEETLSEAQRVDTKAQS-----ALDLKKQNLKDETKKRKELVK 336
Query: 145 NLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDP-QLPVQHCALVEKSSKLKTIECTVKRN 203
N+ + D+ AK + V E KAV + Q + AL K + + N
Sbjct: 337 NMEE----DKKVMSAKEAEVAKAVERLKAVKEEGQKDAE--ALEAAQQHFKAVSAGLSAN 390
Query: 204 GDTLNQ-LKALNVEQEKDVERVRQRAELLE-KVESMKKKLPWLKYDMKKAE 252
D L + + D+ + A+ + K++ +++L + +KK +
Sbjct: 391 EDGAEATLSGQMMTCKNDISKAETEAKQAQMKLKHAQQELKTKQAQVKKMD 441
Score = 44 (20.5 bits), Expect = 1.6e-11, Sum P(3) = 1.6e-11
Identities = 11/56 (19%), Positives = 30/56 (53%)
Query: 382 VQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAENIFEA 437
+Q Q + K ++ + QN+ +++ S ++++E + +K + + + E + EA
Sbjct: 253 LQEMQSSIAKLQEN--MKQNEAKVKELSAEIQELERRRDKEVGGVLRTLEETLSEA 306
Score = 43 (20.2 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 14/74 (18%), Positives = 34/74 (45%)
Query: 181 VQHCALVEKSSKLKTIECTVKRNGDTLNQLKALN--VEQEKDVERVRQRAELLEKVESMK 238
+Q + ++ +L+ + T++ DTL + K + E++ +V + + E+ + +K
Sbjct: 735 LQQSSFHKQQEELENLRKTIEECEDTLQKTKEVQKKAEEKYNVLENKMKNAAAEREKELK 794
Query: 239 KKLPWLKYDMKKAE 252
L KA+
Sbjct: 795 AAQQKLNQAKSKAD 808
Score = 40 (19.1 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
Identities = 14/51 (27%), Positives = 27/51 (52%)
Query: 209 QLKALNVEQEKD---VERVRQRA----ELLEKVESMKKKLPWLKYDMKKAE 252
++K LN E ++ +E+ RQ + +L E ES+ + P L+++ E
Sbjct: 464 EMKKLNYEDGREECLLEQKRQFSREVIQLREAYESLMGQFPNLRFEYTDPE 514
Score = 39 (18.8 bits), Expect = 0.00095, Sum P(2) = 0.00095
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 426 LRNSGAENIFEAYCWL 441
L SG NI ++ C+L
Sbjct: 33 LNGSGKSNILDSICFL 48
>ZFIN|ZDB-GENE-030131-3196 [details] [associations]
symbol:smc3 "structural maintenance of chromosomes
3" species:7955 "Danio rerio" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0051276
"chromosome organization" evidence=IEA] [GO:0007064 "mitotic sister
chromatid cohesion" evidence=IMP] InterPro:IPR010935 Pfam:PF06470
SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
ZFIN:ZDB-GENE-030131-3196 GO:GO:0005524 GO:GO:0005694 HSSP:P58301
GO:GO:0007064 SUPFAM:SSF75553 KO:K06669 CTD:9126 HOVERGEN:HBG039849
EMBL:BC044408 IPI:IPI00616384 RefSeq:NP_999854.1 UniGene:Dr.24937
ProteinModelPortal:Q803N2 STRING:Q803N2 PRIDE:Q803N2 GeneID:324475
KEGG:dre:324475 InParanoid:Q803N2 NextBio:20808789
ArrayExpress:Q803N2 Bgee:Q803N2 Uniprot:Q803N2
Length = 1216
Score = 134 (52.2 bits), Expect = 3.0e-13, Sum P(3) = 3.0e-13
Identities = 83/364 (22%), Positives = 151/364 (41%)
Query: 643 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRRE-MENHIN-LRKRK----LESIEKE- 695
+Q + R + +E KL+ + + RKR + +E +N LR+ + L + E
Sbjct: 807 LQQDNRQLLNERIKLEGIMTRVETYLNENLRKRLDQVEQELNELRETEGGTVLTATTSEL 866
Query: 696 DDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHM-ASIEFDAKIREL 754
D IN + + ++ DL+ K +EIK + +W EK +I D K EL
Sbjct: 867 DGINKRIKDTMARSEDLDTLIDKTEVEIKEHQKSME--RWKNIEKEQNEAINHDTK--EL 922
Query: 755 EFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDA--KRQAESIAFITPELEKEFLEMPT 812
E + + + L+ E+C K++ +A K Q ++ + +LE+ E+
Sbjct: 923 E-KMTNRQGMLLKKK---EECMKKIRELGSLPQEAFEKYQTLTLKQLFRKLEQCNTELKK 978
Query: 813 TIEELEAAIQD--NISQANSIFFLNQNILQE-YEHRQRQIEDLST-KQEADKKELKRFLA 868
+ A+ N S+ Q+ L Y+ + L K EA + K+
Sbjct: 979 YSHVNKKALDQFVNFSEQKEKLIKRQDELDRGYKSIMELMNVLELRKYEAIQLTFKQVSK 1038
Query: 869 EIDALKEKWLPTLR-NLVAQINETFSRNFQEMAVAGEV----SLDEHESDFDKF-GILIK 922
+ +K +P + LV + +T Q+ G+ S D+F G+ I+
Sbjct: 1039 NFSEVFQKLVPGGKATLVMKKGDTEGGQSQDEGEGGDSERASSSQSSVPSVDQFTGVGIR 1098
Query: 923 VKFRQSGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMF 982
V F Q E+ SGG++S+ + + ++Q PF + DEI+Q +D RK
Sbjct: 1099 VSFTGK-QGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFYLFDEIDQALDA-QHRKAA 1156
Query: 983 QQLV 986
++
Sbjct: 1157 SDMI 1160
Score = 130 (50.8 bits), Expect = 3.0e-13, Sum P(3) = 3.0e-13
Identities = 78/386 (20%), Positives = 150/386 (38%)
Query: 23 IIEIELHNFMTF-DHLICKP-GSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI 80
I ++ + F ++ D + P GS+ N+++G NGSGKS+ AI L + L R
Sbjct: 3 IKQVIIQGFRSYRDQTVVDPFGSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHL-RPEQR 61
Query: 81 GAYVKRGEESGYIK--ISLRGDTKEEHLTI------MRKIDTRNKSEWFFNGKVVPKGEV 132
A + G I + + D + L I +R++ K ++F + K+V K +V
Sbjct: 62 LALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKNDV 121
Query: 133 LEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSK 192
+ + + +N + Q ++ + A + L+ + G V E S
Sbjct: 122 MNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTR---VYDERKEESISL 178
Query: 193 LKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAE 252
+K E KR + +N+L E+ +E ++ +K + M++ L + Y+ + E
Sbjct: 179 MKETEG--KR--EKINELLKYIEERLHTLEDEKEELAQYQKWDKMRRALEYTIYNQELNE 234
Query: 253 YIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCK-KLSSLINENSKRRMD 311
L + + K +E + + K ++S++ E + +
Sbjct: 235 TRAKLDELSSKRETCGDKSRQLRDAQQDARDKVEETERVVRELKSRISAMKEEKEQLSAE 294
Query: 312 FLEKVDQGVQVQGKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQT-VPAYEPPHDKI 370
E++ Q +++ K K +LK R Q + EP + +
Sbjct: 295 RQEQIKQRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELQETEPKFNTV 354
Query: 371 -EKLGSQILELGVQANQKRLQKSEKE 395
EK I L QA Q+R K+
Sbjct: 355 KEKEERGIARLA-QATQERTDLYAKQ 379
Score = 73 (30.8 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 21/75 (28%), Positives = 38/75 (50%)
Query: 802 ELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKK 861
EL+K+ + + ELEA + +N+ + +I +N I + Q++ + T+Q K
Sbjct: 677 ELQKDMRKAEEELGELEAKLNENLRR--NIETINNEI----DQLMNQMQQIETQQRKFKA 730
Query: 862 ELKRFLAEIDALKEK 876
L+E+ LKEK
Sbjct: 731 SRDSILSEMKMLKEK 745
Score = 68 (29.0 bits), Expect = 7.0e-06, Sum P(2) = 7.0e-06
Identities = 55/297 (18%), Positives = 125/297 (42%)
Query: 643 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDI--NT 700
+ + + IE + K + R+ I++ +++ K KR++ E ++R L+S+E +T
Sbjct: 714 LMNQMQQIETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMEST 773
Query: 701 ALAKLVDQAADLNIQ-QFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLK 759
+ + ADL Q + + +L EI + + I+ + + +E L
Sbjct: 774 RESLKAELGADLLSQLSLEDQRRVDDLNDEIRQLQQDNRQLLNERIKLEGIMTRVETYLN 833
Query: 760 QHEKLAL-QASLHYEDCKK------------EVEHCRKHLSDAKRQAESIAFITPELEKE 806
++ + L Q + ++ E++ K + D ++E + + + E E
Sbjct: 834 ENLRKRLDQVEQELNELRETEGGTVLTATTSELDGINKRIKDTMARSEDLDTLIDKTEVE 893
Query: 807 FLEMPTTIEELEAAIQDNIS-QANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKR 865
E ++E + NI + N + L++ +RQ + L K+E KK +
Sbjct: 894 IKEHQKSMERWK-----NIEKEQNEAINHDTKELEKMTNRQGML--LKKKEECMKKIREL 946
Query: 866 FLAEIDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIK 922
+A ++ TL+ L ++ E + ++ + + +LD+ + ++ LIK
Sbjct: 947 GSLPQEAFEKYQTLTLKQLFRKL-EQCNTELKKYSHVNKKALDQFVNFSEQKEKLIK 1002
Score = 60 (26.2 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 37/155 (23%), Positives = 62/155 (40%)
Query: 362 AYEPPHDKIEKLGSQILEL-----GVQANQKRLQKSEKEKILNQNKLTLR--QCSDRLKD 414
A + DK+E+ + EL ++ +++L +E+I + KL L+ D L
Sbjct: 259 AQQDARDKVEETERVVRELKSRISAMKEEKEQLSAERQEQIKQRTKLELKAKDLQDELAG 318
Query: 415 MEDKNNKLLHALRNSGAENIFEAYCWLQQHRHELN----KEAYGPVLLEVNVSNRAHANY 470
++ +LL R E I E LQ+ + N KE G L R Y
Sbjct: 319 NSEQRKRLLKE-RQKLLEKIEEKQKELQETEPKFNTVKEKEERGIARLAQATQERTDL-Y 376
Query: 471 LEDHVGHYIWKSFITQDAGDRDFLAKNLKPFDVPI 505
+ G F +++ D+ ++ K LK D I
Sbjct: 377 AKQGRG----SQFTSKEERDK-WIKKELKSLDQAI 406
Score = 55 (24.4 bits), Expect = 5.7e-05, Sum P(2) = 5.7e-05
Identities = 23/134 (17%), Positives = 62/134 (46%)
Query: 186 LVEKSSKLKTIECTVKRNGDT-LNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWL 244
L+ + +++T + K + D+ L+++K L ++++ + + L+ +E+ +
Sbjct: 714 LMNQMQQIETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMEST 773
Query: 245 KYDMKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQ---EKAILDGDCKKLSSL 301
+ +K AE + + E + + +Q E+ L+G ++ +
Sbjct: 774 RESLK-AE-LGADLLSQLSLEDQRRVDDLNDEIRQLQQDNRQLLNERIKLEGIMTRVETY 831
Query: 302 INENSKRRMDFLEK 315
+NEN ++R+D +E+
Sbjct: 832 LNENLRKRLDQVEQ 845
Score = 54 (24.1 bits), Expect = 3.0e-13, Sum P(3) = 3.0e-13
Identities = 34/165 (20%), Positives = 74/165 (44%)
Query: 370 IEKLGSQILELGVQANQKRLQ----KSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHA 425
IE + ++I +L Q Q Q K+ ++ IL++ K+ LK+ ++ K
Sbjct: 704 IETINNEIDQLMNQMQQIETQQRKFKASRDSILSEMKM--------LKEKRQQSEKTFMP 755
Query: 426 LRNSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLEDHVGHYIWKSFIT 485
+ S +++ + ++ R L E +L ++++ ++ + L D + +
Sbjct: 756 KQRS-LQSLEASLHAMESTRESLKAELGADLLSQLSLEDQRRVDDLNDEIRQ------LQ 808
Query: 486 QDAGDRDFLAKNLKPFDVP--ILNYVSNESSRKEPFQISEEMRAL 528
QD +R L + +K + + Y+ NE+ RK Q+ +E+ L
Sbjct: 809 QD--NRQLLNERIKLEGIMTRVETYL-NENLRKRLDQVEQELNEL 850
>TAIR|locus:2045159 [details] [associations]
symbol:TTN7 "AT2G27170" species:3702 "Arabidopsis
thaliana" [GO:0005524 "ATP binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;ISS;IDA] [GO:0007059 "chromosome
segregation" evidence=ISS;IMP] [GO:0008278 "cohesin complex"
evidence=ISS] [GO:0000785 "chromatin" evidence=IDA] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005819 "spindle" evidence=IDA] [GO:0016363
"nuclear matrix" evidence=IDA] [GO:0007062 "sister chromatid
cohesion" evidence=IMP] [GO:0009506 "plasmodesma" evidence=IDA]
[GO:0010267 "production of ta-siRNAs involved in RNA interference"
evidence=RCA] [GO:0035196 "production of miRNAs involved in gene
silencing by miRNA" evidence=RCA] [GO:0051607 "defense response to
virus" evidence=RCA] InterPro:IPR010935 Pfam:PF06470 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0009506 GO:GO:0005524
GO:GO:0005737 EMBL:CP002685 GO:GO:0005819 GO:GO:0000785
GO:GO:0003682 HSSP:P01096 GO:GO:0016363 EMBL:AC007154 EMBL:AC007290
GO:GO:0008278 GO:GO:0007062 eggNOG:COG1196 SUPFAM:SSF75553
PROSITE:PS51131 EMBL:AJ504805 EMBL:AY525642 EMBL:AK220965
EMBL:AK221283 EMBL:AK226305 EMBL:AK229499 IPI:IPI00549149
PIR:F84669 RefSeq:NP_001077968.1 RefSeq:NP_180285.4
UniGene:At.28786 ProteinModelPortal:Q56YN8 SMR:Q56YN8 STRING:Q56YN8
PRIDE:Q56YN8 EnsemblPlants:AT2G27170.1 EnsemblPlants:AT2G27170.2
GeneID:817259 KEGG:ath:AT2G27170 TAIR:At2g27170
HOGENOM:HOG000166512 InParanoid:Q56YN8 KO:K06669 OMA:NKVLEHF
PhylomeDB:Q56YN8 ProtClustDB:CLSN2692426 Genevestigator:Q56YN8
Uniprot:Q56YN8
Length = 1204
Score = 118 (46.6 bits), Expect = 3.4e-13, Sum P(3) = 3.4e-13
Identities = 45/236 (19%), Positives = 106/236 (44%)
Query: 23 IIEIELHNFMTFDHLICKP--GSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI 80
I ++ + F ++ + +++N V+G NGSGKS+ AI L Q L R+
Sbjct: 3 IKQVIIEGFKSYKEQVATEEFSNKVNCVVGANGSGKSNFFHAIRFVLSDIYQNL-RSEDR 61
Query: 81 GAYVKRGEE----SGYIKISL-RGDTK----EEHLTIMRKIDTRNKSEWFFNGKVVPKGE 131
A + G S +++I D + +E + + R + + K ++F +GK + KGE
Sbjct: 62 HALLHEGAGHQVVSAFVEIVFDNSDNRFPVDKEEIRLRRTVGLK-KDDYFLDGKHITKGE 120
Query: 132 VLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSS 191
V+ + + N + Q ++ + ++ L+ K +G ++ + +
Sbjct: 121 VMNLLESAGFSRANPYYVVQQGKIASLTLMKDIERLDLL-KEIGGTRVYEER-----RRE 174
Query: 192 KLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYD 247
L+ ++ T + + + L+ E+ ++++ ++ ++++ +K L + YD
Sbjct: 175 SLRIMQETGNKRKQIIEVVHYLD-ERLRELDEEKEELRKYQQLDKQRKSLEYTIYD 229
Score = 105 (42.0 bits), Expect = 3.4e-13, Sum P(3) = 3.4e-13
Identities = 54/250 (21%), Positives = 107/250 (42%)
Query: 659 KEREEIINI-VQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVD--QAADLNIQ 715
+ERE++ + +I+ K ++ + +R+ E E +I T L + + QA +I
Sbjct: 782 EEREQLSKLNPEIKDLKEKKFAYQADRIERETRKAELEANIATNLKRRITELQATIASID 841
Query: 716 QFKYAIEIKNLLVEIVSCKWSYAE--KHMASI--EFDAKIRELEFNLKQHEKLALQASLH 771
E+ K S E K + S+ D K ++++ +K EK L+ +L
Sbjct: 842 DDSLPSSAGTKEQELDDAKLSVNEAAKELKSVCDSIDEKTKQIK-KIKD-EKAKLK-TLE 898
Query: 772 YEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEM-PTTIEELEAAIQDNISQANS 830
+DCK ++ K L + ++ E K+ + P + + + + NI +
Sbjct: 899 -DDCKGTLQDLDKKLEELFSLRNTLLAKQDEYTKKIRGLGPLSSDAFDTYKRKNIKELQK 957
Query: 831 IFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLVAQINE 890
+ LQ++ H ++ D ++EL+ AE+DA EK + L + +E
Sbjct: 958 MLHRCSEQLQQFSHVNKKALDQYVNFTEQREELQNRQAELDAGDEKIKELITVLDQRKDE 1017
Query: 891 TFSRNFQEMA 900
+ R F+ +A
Sbjct: 1018 SIERTFKGVA 1027
Score = 95 (38.5 bits), Expect = 3.4e-13, Sum P(3) = 3.4e-13
Identities = 26/99 (26%), Positives = 48/99 (48%)
Query: 911 ESDFDKF-GILIKVKFRQSGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEI 969
E +K+ G+ +KV F G+ +++ SGG+++V + + ++Q PF + DEI
Sbjct: 1072 EGRVEKYIGVKVKVSFTGQGETQLMK--QLSGGQKTVVALALIFAIQRCDPAPFYLFDEI 1129
Query: 970 NQGMDPINERKMFQQLVRAASQPNTPQCFLLTPKLLPDL 1008
+ +DP R L+R + Q +T P+L
Sbjct: 1130 DAALDP-QYRTAVGNLIRRLADDYGTQ--FITTTFRPEL 1165
Score = 94 (38.1 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 62/307 (20%), Positives = 134/307 (43%)
Query: 650 IEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQA 709
+++ +L +E+EE+ Q++K+ R+ +E I K ++ EK + + A K +++
Sbjct: 196 LDERLRELDEEKEELRKYQQLDKQ-RKSLEYTI-YDKELHDAREKLEQVEVARTKASEES 253
Query: 710 ADLNIQQFKYAIEIKNL---LVEIVS-CKWSYAEKHMASIEFDAKIRE---LEFNLKQHE 762
+ + K + K+L L E+ + Y EK + +++ LE ++K +
Sbjct: 254 TKMYDRVEKAQDDSKSLDESLKELTKELQTLYKEKETVEAQQTKALKKKTKLELDVKDFQ 313
Query: 763 KLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIA-FITPELEKEFLEMPTTIEELEAAI 821
D +++ + + D+ R+ E+I +++KE + I ELE +
Sbjct: 314 DRITGNIQSKNDALEQLNTVEREMQDSLRELEAIKPLYESQVDKEN-QTSKRINELEKTL 372
Query: 822 QDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTL 881
SI + Q ++ ++ + D ++E + +LKR L + + ++E+ L
Sbjct: 373 --------SILYQKQGRATQFSNKAAR--DKWLRKEIE--DLKRVL-DSNTVQEQ---KL 416
Query: 882 RNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVLSAHHQSG 941
++ + ++N + E EV + E ES K L K R+ + E + G
Sbjct: 417 QDEILRLNTDLTER-DEHIKKHEVEIGELESRISKSHELFNTKKRERDE-EQRKRKEKWG 474
Query: 942 GERSVST 948
E +S+
Sbjct: 475 EESQLSS 481
Score = 87 (35.7 bits), Expect = 2.3e-11, Sum P(3) = 2.3e-11
Identities = 52/240 (21%), Positives = 105/240 (43%)
Query: 651 EDEAAKLQKEREEIINIVQ-IEKRKRR-EMENHINLRKR-KLESIEKE--DDINTALAKL 705
+D++ L + +E+ +Q + K K E + L+K+ KLE K+ D I +
Sbjct: 264 QDDSKSLDESLKELTKELQTLYKEKETVEAQQTKALKKKTKLELDVKDFQDRITGNIQSK 323
Query: 706 VDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLK-QHEKL 764
D LN + E+++ L E+ + K Y + + +I ELE L ++K
Sbjct: 324 NDALEQLNTVER----EMQDSLRELEAIKPLYESQVDKENQTSKRINELEKTLSILYQKQ 379
Query: 765 ALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDN 824
+A+ ++ + RK + D KR +S +L+ E L + T + E + I+ +
Sbjct: 380 G-RATQFSNKAARD-KWLRKEIEDLKRVLDSNTVQEQKLQDEILRLNTDLTERDEHIKKH 437
Query: 825 ISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNL 884
+ + + + ++R+ ++ K++ E + +EID LK + +NL
Sbjct: 438 EVEIGELESRISKSHELFNTKKRERDEEQRKRKEKWGEESQLSSEIDKLKTELERAKKNL 497
Score = 82 (33.9 bits), Expect = 7.2e-11, Sum P(3) = 7.2e-11
Identities = 52/199 (26%), Positives = 90/199 (45%)
Query: 651 EDEAAKLQKEREEIINIVQIEKRKRREMENHINLRK--RK-LESIEKEDDINTALA-KLV 706
E++ +K E E+ ++I+ ++ + + N K RK +E +++ D NT KL
Sbjct: 358 ENQTSKRINELEKTLSILYQKQGRATQFSNKAARDKWLRKEIEDLKRVLDSNTVQEQKLQ 417
Query: 707 DQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIREL-EFNLKQHEKLA 765
D+ LN + IK VEI + ++ H F+ K RE E K+ EK
Sbjct: 418 DEILRLNTDLTERDEHIKKHEVEIGELESRISKSHEL---FNTKKRERDEEQRKRKEKWG 474
Query: 766 LQASLHYE-D-CKKEVEHCRKHLS-----DAKRQAESIAFITPE--LEKEF---LEMPTT 813
++ L E D K E+E +K+L D +R SI I + + F +E+
Sbjct: 475 EESQLSSEIDKLKTELERAKKNLDHATPGDVRRGLNSIRRICADYRINGVFGPLVELVDC 534
Query: 814 IEELEAAIQDNISQANSIF 832
E+ A++ ++ NS+F
Sbjct: 535 DEKFFTAVE--VTAGNSLF 551
Score = 82 (33.9 bits), Expect = 7.2e-11, Sum P(3) = 7.2e-11
Identities = 50/231 (21%), Positives = 103/231 (44%)
Query: 678 MEN--HINLRKRKLESIEKE-DDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCK 734
M+N IN ++++LE + ++ I+ + +LV + L ++++ L EI +
Sbjct: 674 MQNTKSINEKEKELEDVRRQLQVIDQQITQLVTEQQRLEADWTLCKLQVEQLKQEIANAN 733
Query: 735 WSYAEKHMASIEFDAKIR-ELEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQA 793
H A IE+ K+ ++ + Q +++S+ ++ + E HL+ +R
Sbjct: 734 KQKHAIHKA-IEYKEKLLGDIRTRIDQ-----VRSSMSMKEAEMGTELV-DHLTPEER-- 784
Query: 794 ESIAFITPEL----EKEF------LEMPTTIEELEAAIQDNIS------QANSIFFLNQN 837
E ++ + PE+ EK+F +E T ELEA I N+ QA + +
Sbjct: 785 EQLSKLNPEIKDLKEKKFAYQADRIERETRKAELEANIATNLKRRITELQATIASIDDDS 844
Query: 838 ILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLVAQI 888
+ ++++++D KELK ID K K + +++ A++
Sbjct: 845 LPSSAGTKEQELDDAKLSVNEAAKELKSVCDSIDE-KTKQIKKIKDEKAKL 894
Score = 77 (32.2 bits), Expect = 2.3e-10, Sum P(3) = 2.3e-10
Identities = 33/186 (17%), Positives = 82/186 (44%)
Query: 739 EKHMASIEFDAKIRELEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAF 798
EK + + ++ + + E+ L+A + CK +VE ++ +++A +Q +I
Sbjct: 684 EKELEDVRRQLQVIDQQITQLVTEQQRLEAD--WTLCKLQVEQLKQEIANANKQKHAIHK 741
Query: 799 ITPELEKEFLEMPTTIEELEAAIQDNISQANS--IFFLNQNILQEYEHRQRQIEDLSTKQ 856
EK ++ T I+++ +++ ++ + + L ++ +I+DL K+
Sbjct: 742 AIEYKEKLLGDIRTRIDQVRSSMSMKEAEMGTELVDHLTPEEREQLSKLNPEIKDLKEKK 801
Query: 857 ---EADKKELKRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESD 913
+AD+ E + AE++A L+ + ++ T + + + ++ E E D
Sbjct: 802 FAYQADRIERETRKAELEA---NIATNLKRRITELQATIA-SIDDDSLPSSAGTKEQELD 857
Query: 914 FDKFGI 919
K +
Sbjct: 858 DAKLSV 863
Score = 69 (29.3 bits), Expect = 1.5e-09, Sum P(3) = 1.5e-09
Identities = 30/140 (21%), Positives = 64/140 (45%)
Query: 777 KEVEHCRKHLSDAKRQAESIAFITPEL--EKEFLEMPTTIEELEAA-IQDNISQANSIFF 833
K + K L D +RQ + I +L E++ LE T+ +L+ ++ I+ AN
Sbjct: 678 KSINEKEKELEDVRRQLQVIDQQITQLVTEQQRLEADWTLCKLQVEQLKQEIANANK--- 734
Query: 834 LNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDA-LKEKWLPTLRNLVAQINETF 892
I + E++++ + D+ T+ + + + AE+ L + P R ++++N
Sbjct: 735 QKHAIHKAIEYKEKLLGDIRTRIDQVRSSMSMKEAEMGTELVDHLTPEEREQLSKLNPEI 794
Query: 893 SRNFQEMAVAGEVSLDEHES 912
++ +E A + E E+
Sbjct: 795 -KDLKEKKFAYQADRIERET 813
Score = 48 (22.0 bits), Expect = 4.1e-06, Sum P(3) = 4.1e-06
Identities = 10/47 (21%), Positives = 25/47 (53%)
Query: 189 KSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVE 235
K+ L+ + + D+L +L+A+ E V++ Q ++ + ++E
Sbjct: 323 KNDALEQLNTVEREMQDSLRELEAIKPLYESQVDKENQTSKRINELE 369
Score = 47 (21.6 bits), Expect = 2.4e-07, Sum P(3) = 2.4e-07
Identities = 12/44 (27%), Positives = 24/44 (54%)
Query: 277 FSKPIEGKKQEKAILDGDCKKLSSLINENSKRRMDFLEKVDQGV 320
F++ E + +A LD +K+ LI +R+ + +E+ +GV
Sbjct: 983 FTEQREELQNRQAELDAGDEKIKELITVLDQRKDESIERTFKGV 1026
Score = 46 (21.3 bits), Expect = 6.5e-06, Sum P(3) = 6.5e-06
Identities = 8/27 (29%), Positives = 21/27 (77%)
Query: 207 LNQLKALNVEQEKDVERVRQRAELLEK 233
+ K++N E+EK++E VR++ +++++
Sbjct: 674 MQNTKSIN-EKEKELEDVRRQLQVIDQ 699
Score = 43 (20.2 bits), Expect = 8.7e-07, Sum P(4) = 8.7e-07
Identities = 9/30 (30%), Positives = 16/30 (53%)
Query: 394 KEKILNQNKLTLRQCSDRLKDMEDKNNKLL 423
K K + + + L +CS++L+ N K L
Sbjct: 948 KRKNIKELQKMLHRCSEQLQQFSHVNKKAL 977
Score = 43 (20.2 bits), Expect = 1.4e-06, Sum P(4) = 1.4e-06
Identities = 34/138 (24%), Positives = 60/138 (43%)
Query: 644 QTEQ-RLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTAL 702
+T+Q + I+DE AKL+ ++ +Q +K E+ +LR L K+D+ +
Sbjct: 880 KTKQIKKIKDEKAKLKTLEDDCKGTLQDLDKKLEEL---FSLRNTLLA---KQDEYTKKI 933
Query: 703 AKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHE 762
L ++D +K IK L + C S + + + A + + F ++ E
Sbjct: 934 RGLGPLSSDA-FDTYKRK-NIKELQKMLHRC--SEQLQQFSHVNKKALDQYVNFTEQREE 989
Query: 763 KLALQASLHYEDCK-KEV 779
QA L D K KE+
Sbjct: 990 LQNRQAELDAGDEKIKEL 1007
Score = 42 (19.8 bits), Expect = 8.7e-07, Sum P(4) = 8.7e-07
Identities = 17/54 (31%), Positives = 25/54 (46%)
Query: 272 NTLHEFSKPIEGKKQEKA---ILDGDCK----KLSSLINENSKRRMDFLEKVDQ 318
+++ E +K I+ K EKA L+ DCK L + E R L K D+
Sbjct: 875 DSIDEKTKQIKKIKDEKAKLKTLEDDCKGTLQDLDKKLEELFSLRNTLLAKQDE 928
Score = 41 (19.5 bits), Expect = 2.0e-05, Sum P(3) = 2.0e-05
Identities = 13/50 (26%), Positives = 24/50 (48%)
Query: 194 KTIECTV--KRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKL 241
K++E T+ K D +L+ + V + K E + + +EK + K L
Sbjct: 221 KSLEYTIYDKELHDAREKLEQVEVARTKASEESTKMYDRVEKAQDDSKSL 270
Score = 41 (19.5 bits), Expect = 2.0e-05, Sum P(3) = 2.0e-05
Identities = 13/68 (19%), Positives = 32/68 (47%)
Query: 186 LVEKSSKLKTIECTVKRNGDTLNQLKAL-NVEQEKDVERVRQRAELLEKVESMKKKLPWL 244
L E+ +K E + +++ L N ++ + E R+R E + + ++ L
Sbjct: 427 LTERDEHIKKHEVEIGELESRISKSHELFNTKKRERDEEQRKRKEKWGEESQLSSEIDKL 486
Query: 245 KYDMKKAE 252
K ++++A+
Sbjct: 487 KTELERAK 494
Score = 40 (19.1 bits), Expect = 1.4e-06, Sum P(4) = 1.4e-06
Identities = 11/42 (26%), Positives = 23/42 (54%)
Query: 394 KEKILNQNKLTLRQCSDRLK---DMEDKNNKLLHALRNSGAE 432
KE+ L+ KL++ + + LK D D+ K + +++ A+
Sbjct: 852 KEQELDDAKLSVNEAAKELKSVCDSIDEKTKQIKKIKDEKAK 893
>UNIPROTKB|E1C610 [details] [associations]
symbol:E1C610 "Structural maintenance of chromosomes
protein" species:9031 "Gallus gallus" [GO:0000796 "condensin
complex" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0006310 "DNA
recombination" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0007076 "mitotic chromosome
condensation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR024704 InterPro:IPR010935 InterPro:IPR027120
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0005694
GO:GO:0006281 GO:GO:0006310 GO:GO:0030261 GO:GO:0007062
SUPFAM:SSF75553 GeneTree:ENSGT00550000074857 PANTHER:PTHR18937:SF9
EMBL:AADN02057751 EMBL:AADN02057752 EMBL:AADN02057753
EMBL:AADN02057754 EMBL:AADN02057755 IPI:IPI00823281
Ensembl:ENSGALT00000037611 ArrayExpress:E1C610 Uniprot:E1C610
Length = 1173
Score = 130 (50.8 bits), Expect = 5.6e-13, Sum P(3) = 5.6e-13
Identities = 77/348 (22%), Positives = 148/348 (42%)
Query: 650 IEDEAAKLQKEREEIINIVQIEKRKRREMENHI-NLRKRKLESI---EKEDDINTALAKL 705
I++ KL +++ + + K K++E+E + L + K E ++ + A+A L
Sbjct: 791 IKNAQQKLNSAKKKADDSSRKMKEKQQEVEALVLELEQLKQEQASYKQQSEAAQQAIASL 850
Query: 706 VDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIREL-EFNLKQHEKL 764
+Q + L + K +KN E+ S K AE+ AKI + E N + H
Sbjct: 851 KEQVSALEAEAVKTRESLKNAENELSSEKGLMAERTKDIKAKSAKIEKYREQNNEIHRNY 910
Query: 765 ALQASLHYEDCKKE---VEHCRKHLSDAKRQA-ESIAFITPELEKEF-LEMPT-TIEELE 818
+ +E +K ++ K L + K A E F + +F P T ++L+
Sbjct: 911 FKEGD-QWEKKQKHSDVMDKLDKLLKEYKWIASEKELFGQADTTYDFEANNPKETGQKLQ 969
Query: 819 AAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWL 878
+ S+ N+L E E +R+ DL K+ + + + LA I+ L K
Sbjct: 970 KLLTKKEKLEKSLNMRAMNLLSEAE--ERKYNDLMKKKRIVENDKIKILATIEELDRKKN 1027
Query: 879 PTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQS-GQLEVLSAH 937
L ++N+ F F + + L + K IL ++FR G + +
Sbjct: 1028 KALHIAWEKVNKDFGSIFSMLLPGAKAMLVPSK----KQNILDGLEFRVGLGDIWKENLT 1083
Query: 938 HQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQL 985
SGG+RS++ + ++++ P ++DE++ +D + + + Q L
Sbjct: 1084 ELSGGQRSLAALSLILAILLFKPAPIYILDEVDAALDLSHTQNIGQML 1131
Score = 118 (46.6 bits), Expect = 5.6e-13, Sum P(3) = 5.6e-13
Identities = 52/226 (23%), Positives = 104/226 (46%)
Query: 46 NLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSIGAYVKRGEESGYIK--ISLRGDTKE 103
N + G NGSGKS+++ +I LG RA+S+ V + ++G K +S+ D +
Sbjct: 28 NAITGLNGSGKSNILDSICFLLGISNLSQVRASSLQDLVYKNGQAGVNKATVSITFDNSD 87
Query: 104 -----------EHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQFL-- 150
+ +TI R++ ++++ NG V ++ + VNN FL
Sbjct: 88 KKNSPLGFENNDEITITRQVIVGGRNKYLINGMNASNNRVQDLFGSVGLNVNN-PHFLIM 146
Query: 151 PQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQL 210
Q ++ + + P ++L E+A G + C K + KTIE + L+++
Sbjct: 147 QQGQITKVLNMKPTEILAMIEEAAGTR---MYECM---KITAHKTIE----KKESKLDEI 196
Query: 211 KALNVEQ-EKDVERVRQ-RAELLEKVESMKKKLPWLKYDMKKAEYI 254
+ + E+ +E++++ RA LE + M +++ L+ +Y+
Sbjct: 197 RRIITEEISPTLEKLKEARASYLE-YQKMTREVENLRRIYVAFQYV 241
Score = 83 (34.3 bits), Expect = 3.4e-08, Sum P(4) = 3.4e-08
Identities = 62/266 (23%), Positives = 109/266 (40%)
Query: 676 REMENHINLRKRKLESIEKEDDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKW 735
R+ E+ + ++ +LE+ EKE LA L + A Q K E+K+ E++ K
Sbjct: 682 RDAEDELKIKTSQLEATEKE------LANLKNMAE--KYQHLKQQWEMKSEEAELLQTKI 733
Query: 736 SYAEKHMASIEFDA---KIRELEFNLKQHEKLALQASLHYEDCK-----------KEVEH 781
+ H + A I E E LK+ E+ +A Y+ + KE+++
Sbjct: 734 QQSAYHKQQEDLLALKKTIAECEETLKKTEESQRKAEEEYKALENKMKNAEAERGKEIKN 793
Query: 782 CRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEEL--EAAIQDNISQA--NSIFFLNQN 837
++ L+ AK++A+ + E ++E + +E+L E A S+A +I L +
Sbjct: 794 AQQKLNSAKKKADDSSRKMKEKQQEVEALVLELEQLKQEQASYKQQSEAAQQAIASLKEQ 853
Query: 838 ILQEYEHRQRQIEDLSTKQEADKKELKRFLAE-IDALKEKWLPTLRNLVAQINETFSRNF 896
+ + E L + E K +AE +K K + Q NE RN+
Sbjct: 854 VSALEAEAVKTRESLKNAENELSSE-KGLMAERTKDIKAK-SAKIEKYREQNNE-IHRNY 910
Query: 897 QEMAVAGEVSLDEHESDFDKFGILIK 922
+ E +H DK L+K
Sbjct: 911 FKEGDQWEKK-QKHSDVMDKLDKLLK 935
Score = 67 (28.6 bits), Expect = 5.6e-13, Sum P(3) = 5.6e-13
Identities = 35/162 (21%), Positives = 77/162 (47%)
Query: 383 QANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAENI-FEAYCWL 441
QAN+K++ +S E N+ K+ ++ + ++++ E KNN++ + +E + F+
Sbjct: 258 QANKKKIFESMAE---NEKKV--KELAQQIEETEKKNNEVRGLFKVLMSEILYFQLLFVC 312
Query: 442 QQHRHELNKEAYGPVLLEVN-VSNRAHANYLEDHVGHYIWKSFITQDAGDRDFLAKN-LK 499
+ L E ++EV + ++ +L VG ++ K + + K+ ++
Sbjct: 313 VSDKMHLKWEILMTSVMEVEKIIDKNAEQHLHLIVGQFVQKDAVRDSIKGLTEIQKDYIR 372
Query: 500 --PFD---VPILNYVSNESSRKEPFQISEEMRALG-ISARLD 535
PF P+L SN +SR+ PF + G ++++L+
Sbjct: 373 CFPFAHQAEPMLT-ASNNASRRAPFLVGSLRTCNGKVTSKLN 413
Score = 66 (28.3 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 19/69 (27%), Positives = 34/69 (49%)
Query: 188 EKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAE----LLEKVESMKKKLPW 243
E + I T ++ D + +LK EQE + + +Q + L E ES++ K P+
Sbjct: 446 EDQEAFEAIRKTKEKLQDEMKKLKYEEAEQEAHLAKKKQLSSEISSLRELCESIEAKHPY 505
Query: 244 LKYDMKKAE 252
L+++ K E
Sbjct: 506 LRFEYKNPE 514
Score = 52 (23.4 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 37/155 (23%), Positives = 67/155 (43%)
Query: 105 HLT-IMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLT---QFLPQ--DRVCEF 158
H+T I+ K+ T +E ++ K LE T++ + N+ Q L Q + E
Sbjct: 670 HVTPILSKLKTMRDAE----DELKIKTSQLEATEKELANLKNMAEKYQHLKQQWEMKSEE 725
Query: 159 AKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKAL-NVEQ 217
A+L K+ + + L ++ + E LK E + +R + + KAL N +
Sbjct: 726 AELLQTKIQQSAYHKQQEDLLALKK-TIAECEETLKKTEES-QRKAE--EEYKALENKMK 781
Query: 218 EKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAE 252
+ ER ++ +K+ S KKK MK+ +
Sbjct: 782 NAEAERGKEIKNAQQKLNSAKKKADDSSRKMKEKQ 816
Score = 46 (21.3 bits), Expect = 7.5e-11, Sum P(3) = 7.5e-11
Identities = 13/47 (27%), Positives = 25/47 (53%)
Query: 375 SQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNK 421
+++L+ +Q Q K ++E +L K T+ +C + LK E+ K
Sbjct: 726 AELLQTKIQ--QSAYHK-QQEDLLALKK-TIAECEETLKKTEESQRK 768
Score = 45 (20.9 bits), Expect = 0.00021, Sum P(3) = 0.00021
Identities = 13/82 (15%), Positives = 39/82 (47%)
Query: 795 SIAFITPELEKEFLEMPTTIEELEAAIQD-NISQANSIFFLNQNILQEYEHRQRQIEDLS 853
+I+ I +++ ++ + ++ E D + + F + ++ + ++++
Sbjct: 413 NISSIKAQMKLKYAQQELKTKQAEVKKMDGSYKEDQEAFEAIRKTKEKLQDEMKKLKYEE 472
Query: 854 TKQEADKKELKRFLAEIDALKE 875
+QEA + K+ +EI +L+E
Sbjct: 473 AEQEAHLAKKKQLSSEISSLRE 494
Score = 44 (20.5 bits), Expect = 3.4e-08, Sum P(4) = 3.4e-08
Identities = 14/45 (31%), Positives = 26/45 (57%)
Query: 651 EDEAA--KLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIE 693
ED+ A ++K +E++ + +++K K E E +L K+K S E
Sbjct: 446 EDQEAFEAIRKTKEKLQD--EMKKLKYEEAEQEAHLAKKKQLSSE 488
Score = 38 (18.4 bits), Expect = 0.00073, Sum P(4) = 0.00073
Identities = 29/111 (26%), Positives = 42/111 (37%)
Query: 781 HCRKHLSDAK--RQAES-IAFITPELE---KEFLEMPTTIEELEAAIQDNISQANSIFFL 834
H LS K R AE + T +LE KE + E+ + Q ++ L
Sbjct: 670 HVTPILSKLKTMRDAEDELKIKTSQLEATEKELANLKNMAEKYQHLKQQWEMKSEEAELL 729
Query: 835 NQNILQEYEHRQRQIEDLST--KQEADKKELKRFLAEIDALKEKWLPTLRN 883
I Q H+Q+ EDL K A+ +E + E E+ L N
Sbjct: 730 QTKIQQSAYHKQQ--EDLLALKKTIAECEETLKKTEESQRKAEEEYKALEN 778
>POMBASE|SPAC10F6.09c [details] [associations]
symbol:psm3 "mitotic cohesin complex subunit Psm3"
species:4896 "Schizosaccharomyces pombe" [GO:0000790 "nuclear
chromatin" evidence=IC] [GO:0000794 "condensed nuclear chromosome"
evidence=IC] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005694 "chromosome" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0007064 "mitotic sister chromatid
cohesion" evidence=IMP] [GO:0008278 "cohesin complex" evidence=IDA]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016887
"ATPase activity" evidence=ISM] [GO:0030892 "mitotic cohesin
complex" evidence=NAS] [GO:0046982 "protein heterodimerization
activity" evidence=IPI] InterPro:IPR010935 Pfam:PF06470
SMART:SM00968 InterPro:IPR003395 PomBase:SPAC10F6.09c Pfam:PF02463
GO:GO:0005829 GO:GO:0005524 EMBL:CU329670 GO:GO:0051301
GenomeReviews:CU329670_GR GO:GO:0016887 GO:GO:0016567 GO:GO:0000790
GO:GO:0000794 GO:GO:0007064 eggNOG:COG1196 SUPFAM:SSF75553
GO:GO:0030892 HOGENOM:HOG000166512 KO:K06669 OMA:NKVLEHF PIR:T37503
RefSeq:NP_593260.1 ProteinModelPortal:O42649 IntAct:O42649
STRING:O42649 EnsemblFungi:SPAC10F6.09c.1 GeneID:2543010
KEGG:spo:SPAC10F6.09c OrthoDB:EOG4TB7KF NextBio:20804043
Uniprot:O42649
Length = 1194
Score = 134 (52.2 bits), Expect = 5.7e-13, Sum P(3) = 5.7e-13
Identities = 73/366 (19%), Positives = 152/366 (41%)
Query: 653 EAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKED-DINTALAKLVDQAAD 711
EA K E E N+ + E+ + + + +L S+++ L + ++
Sbjct: 811 EARKTALEYELNTNLYLRRNPLKAEIGSDNRIDESELNSVKRSLLKYENKLQIIKSSSSG 870
Query: 712 LNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLH 771
L Q + EI + E+ S + + IE DAKI E N + L +
Sbjct: 871 LEEQMQRINSEISDKRNELESLE-ELQHEVATRIEQDAKINER--NAAKRSLLLARK--- 924
Query: 772 YEDCKKEVEHCRKHLSDAKRQA--ESIAFITPELEKEFLEMPTTIEELEAAIQDNISQAN 829
++C +++ K L +A + ++ + + K+ ++ +++ + + Q N
Sbjct: 925 -KECNEKI----KSLGVLPEEAFIKYVSTSSNAIVKKLHKINEALKDYGSVNKKAYEQFN 979
Query: 830 SIFFLNQNIL---QEYEHRQRQIEDLST-----KQEADKKELKRFLAEIDALKEKWLPTL 881
+ ++L +E Q I +L+T K EA ++ K+ + K +P
Sbjct: 980 NFTKQRDSLLARREELRRSQESISELTTVLDQRKDEAIERTFKQVAKSFSEIFVKLVPAG 1039
Query: 882 RN-LVAQINETFSRNFQEMAVAGEVSLDEHESDFDKF-GILIKVKFRQSGQLEVLSAHHQ 939
R LV S++ E ++ ++ +S D + GI I+V F E L+ +
Sbjct: 1040 RGELVMNRRSELSQSI-EQDISMDIDTPSQKSSIDNYTGISIRVSFNSKDD-EQLNINQL 1097
Query: 940 SGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTPQCFL 999
SGG++S+ + + ++Q PF ++DE + +D R +V+ S+ + C
Sbjct: 1098 SGGQKSLCALTLIFAIQRCDPAPFNILDECDANLDA-QYRSAIAAMVKEMSKTSQFICTT 1156
Query: 1000 LTPKLL 1005
P+++
Sbjct: 1157 FRPEMV 1162
Score = 122 (48.0 bits), Expect = 5.7e-13, Sum P(3) = 5.7e-13
Identities = 54/241 (22%), Positives = 110/241 (45%)
Query: 23 IIEIELHNFMTF-DHLICKPGS-RLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI 80
I +I + F ++ D+ + +P S N+++G NGSGKS+ AI L L R
Sbjct: 3 ITKIVIQGFKSYKDYTVIEPLSPHHNVIVGRNGSGKSNFFAAIRFVLSDAYTHLSREER- 61
Query: 81 GAYVKRGEE----SGYIKISL-----RGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGE 131
A + G S Y++++ R T + + + R I + K E+ + K V K E
Sbjct: 62 QALLHEGPGATVMSAYVEVTFANADNRFPTGKSEVVLRRTIGLK-KDEYSLDKKTVSKTE 120
Query: 132 VLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSS 191
V+ + + +N +PQ RV + LE ++ G Q+ A +S+
Sbjct: 121 VINLLESAGFSRSNPYYIVPQGRVTSLTNAKDSERLELLKEVAGT-QIYENRRA---ESN 176
Query: 192 KLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKA 251
K+ ++ T++++ + +++L E+ +++E + + K ++ ++ L + Y +
Sbjct: 177 KI--MDETIQKS-EKIDELLQYIEERLRELEEEKNDLAVYHKKDNERRCLEYAIYSREHD 233
Query: 252 E 252
E
Sbjct: 234 E 234
Score = 66 (28.3 bits), Expect = 3.5e-05, Sum P(4) = 3.5e-05
Identities = 33/133 (24%), Positives = 63/133 (47%)
Query: 770 LHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQAN 829
+ + D ++ +E CR S+ + + I +L+K L + E ++D +
Sbjct: 678 IKFSDLQESLEKCR---SEIESFDQKITACLDDLQKAQLSLKQ-FERDHIPLKDELV--- 730
Query: 830 SIFFLNQNILQEYEHRQRQIE----DLST-KQEADKKELKRFLA-EIDALKEKWLPTLRN 883
+I ++ + H+ R +E +L T +Q+A+ +LK L+ E+D L K + L++
Sbjct: 731 TITGETTDLQESMHHKSRMLELVVLELHTLEQQAN--DLKSELSSEMDELDPKDVEALKS 788
Query: 884 LVAQINETFSRNF 896
L QI E S F
Sbjct: 789 LSGQI-ENLSHEF 800
Score = 63 (27.2 bits), Expect = 2.5e-05, Sum P(3) = 2.5e-05
Identities = 19/69 (27%), Positives = 35/69 (50%)
Query: 186 LVEKSSKLKTIECTVKRNGDTLNQLKALNVEQ--EKDVERVRQRAELLEKVESMKKKLPW 243
L K S+ K IE +++ GD ++QL A N+ E+ +R L + +K +
Sbjct: 427 LKAKLSRKKEIEISLESQGDRMSQLLA-NITSINERKENLTDKRKSLWREEAKLKSSIEN 485
Query: 244 LKYDMKKAE 252
+K D+ ++E
Sbjct: 486 VKDDLSRSE 494
Score = 59 (25.8 bits), Expect = 5.7e-13, Sum P(3) = 5.7e-13
Identities = 22/92 (23%), Positives = 39/92 (42%)
Query: 375 SQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAENI 434
SQ+L N+++ ++K K L + + L+ + +KD ++ K L + N
Sbjct: 449 SQLLANITSINERKENLTDKRKSLWREEAKLKSSIENVKDDLSRSEKALGTTMDRNTSNG 508
Query: 435 FEAYCWLQQHRHELNKEAY-GPVLLEVNVSNR 465
A ++ L E Y GP+ V NR
Sbjct: 509 IRA---VKDIAERLKLEGYYGPLCELFKVDNR 537
Score = 56 (24.8 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 26/103 (25%), Positives = 44/103 (42%)
Query: 361 PAYEPPHDKIEKL----GSQILEL-----GVQANQKRLQKSEK---EKILNQNKLT--LR 406
P Y P ++ L S+ LEL G Q + R +S K E I K+ L+
Sbjct: 135 PYYIVPQGRVTSLTNAKDSERLELLKEVAGTQIYENRRAESNKIMDETIQKSEKIDELLQ 194
Query: 407 QCSDRLKDMEDKNNKLLHALRNSGAENIFEAYCWLQQHRHELN 449
+RL+++E++ N L + E + ++H E+N
Sbjct: 195 YIEERLRELEEEKNDLAVYHKKDNERRCLEYAIYSREH-DEIN 236
Score = 49 (22.3 bits), Expect = 3.5e-05, Sum P(4) = 3.5e-05
Identities = 17/64 (26%), Positives = 33/64 (51%)
Query: 643 MQTEQRLIEDEA-AKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTA 701
++TE +E+E AKL +++E I++ R + + N ++ +RK +K +
Sbjct: 416 LKTEYDEMENELKAKLSRKKEIEISLESQGDRMSQLLANITSINERKENLTDKRKSLWRE 475
Query: 702 LAKL 705
AKL
Sbjct: 476 EAKL 479
Score = 44 (20.5 bits), Expect = 1.9e-11, Sum P(3) = 1.9e-11
Identities = 18/69 (26%), Positives = 37/69 (53%)
Query: 362 AYEPPHDKIEKLGSQILELGVQANQKRLQKSEK-EKILN--QNKLTLRQCSDRL-KDME- 416
A+ ++IE++ ++I EL R++K + E N ++K+ L S +L + +E
Sbjct: 259 AFIQREERIERIKAEITELNHSLELLRVEKQQNDEDYTNIMKSKVALELQSSQLSRQIEF 318
Query: 417 ---DKNNKL 422
D+++KL
Sbjct: 319 SKKDESSKL 327
Score = 42 (19.8 bits), Expect = 3.0e-11, Sum P(3) = 3.0e-11
Identities = 25/115 (21%), Positives = 47/115 (40%)
Query: 358 QTVPAYEPPHDKIEKLGSQILELGV---QANQKRLQ-KSEKEKILNQNKLTLRQCSDRLK 413
+T E H K L +LEL QAN + + SE +++ ++ L+ S +++
Sbjct: 735 ETTDLQESMHHKSRMLELVVLELHTLEQQANDLKSELSSEMDELDPKDVEALKSLSGQIE 794
Query: 414 DMEDKNNKLLHALRNSGAENIFEAYCWLQQHRHELNKEAY---GPVLLEVNVSNR 465
++ + + ++ + A Y ELN Y P+ E+ NR
Sbjct: 795 NLSHEFDAIIKERAHIEARKTALEY--------ELNTNLYLRRNPLKAEIGSDNR 841
Score = 37 (18.1 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 18/105 (17%), Positives = 44/105 (41%)
Query: 135 ITKRFNIQVNNLTQFLPQDRVCEFAKLSPVK-LLEETEKAVGDPQLPVQHCALVEKSSKL 193
I R + ++N++ L QDR+ + + E+ + ++ + + E + L
Sbjct: 227 IYSREHDEINSVLDALEQDRIAALERNDDDSGAFIQREERI--ERIKAE---ITELNHSL 281
Query: 194 KTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMK 238
+ + ++N + + V E ++ ++ E +K ES K
Sbjct: 282 ELLRVEKQQNDEDYTNIMKSKVALELQSSQLSRQIEFSKKDESSK 326
>UNIPROTKB|Q97QG7 [details] [associations]
symbol:smc "Chromosome partition protein Smc"
species:170187 "Streptococcus pneumoniae TIGR4" [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR024704 HAMAP:MF_01894
InterPro:IPR010935 InterPro:IPR011890 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0005737 GO:GO:0005694 GO:GO:0003677
GO:GO:0006260 GO:GO:0006281 GO:GO:0006310 EMBL:AE005672
GenomeReviews:AE005672_GR GO:GO:0030261 GO:GO:0007062
SUPFAM:SSF75553 HOGENOM:HOG000036392 KO:K03529 TIGRFAMs:TIGR02168
HSSP:Q9X0R4 OMA:GDITKFI PIR:G95144 RefSeq:NP_345712.1
ProteinModelPortal:Q97QG7 EnsemblBacteria:EBSTRT00000025640
GeneID:931760 KEGG:spn:SP_1247 PATRIC:19706887
ProtClustDB:CLSK877065 Uniprot:Q97QG7
Length = 1179
Score = 172 (65.6 bits), Expect = 7.8e-13, Sum P(3) = 7.8e-13
Identities = 69/351 (19%), Positives = 162/351 (46%)
Query: 643 MQTEQRLIEDEAAKLQKEREEIINI-VQIEKRKRREMENHINLRKRKLESIE-KEDDINT 700
+++ + I++ LQ+E + + +++ +KR E+ + L K +L++++ ++++I
Sbjct: 790 IKSNKNAIQERYQNLQEELAQARLLKTELQGQKRYEVADIERLGK-ELDNLDFEQEEIQR 848
Query: 701 ALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNL-- 758
L + +D ++ + E + + + K + + ++ ++ +L
Sbjct: 849 LLQEKIDNLEKVDTELLSQQAEESK--TQKTNLQQGLIRKQFELDDIEGQLDDIASHLDQ 906
Query: 759 -KQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEEL 817
+Q + ++ E K++V +HL I++ T LEK E+ +
Sbjct: 907 ARQQNEEWIRKQTRAEAKKEKVSERLRHLQSQLTDQYQISY-TEALEKAH-ELEN-LNLA 963
Query: 818 EAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAE-IDALKEK 876
E ++D S+ +N + +++YE +++ L+++++ D K L E I + ++
Sbjct: 964 EQEVKDLEKAIRSLGPVNLDAIEQYEEVHNRLDFLNSQRD-DILSAKNLLLETITEMNDE 1022
Query: 877 WLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVLSA 936
++ I E+F F++M G+ L E D G+ I V+ G+ ++ S
Sbjct: 1023 VKERFKSTFEVIRESFKVTFKQMFGGGQADLILTEGDLLTAGVEISVQ--PPGK-KIQSL 1079
Query: 937 HHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVR 987
+ SGGE+++S + L S+ + PF ++DE+ +D N ++ L R
Sbjct: 1080 NLMSGGEKALSALALLFSIIRVKTIPFVILDEVEAALDEANVKRFGDYLNR 1130
Score = 107 (42.7 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 69/306 (22%), Positives = 131/306 (42%)
Query: 650 IEDEAAKLQKEREEIINIVQI-----EKRKRREMENHINLRKRKLESIEKEDDINTALAK 704
I++ A+L+ EE+ + ++ +KR++ E EN L+K++ D+ +AK
Sbjct: 234 IKENKAELESTEEELTQVQELLMSYYQKREKLEEENQ-TLKKQR-------QDLQAEMAK 285
Query: 705 LVDQAADLN--IQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHE 762
DL I + + + L E V+ A+ +A++E E + K+
Sbjct: 286 DQGSLMDLTSLISDLERKLALSKLESEQVALNQQEAQARLAALEDKRNSLSKEKSDKESS 345
Query: 763 KLALQASLHYEDCK-KEVEHCRKHLSDAKRQAESIA---FITP-ELEKEFLEMPTTIE-E 816
L+ +L + K +E SD Q + F+ + E + T IE E
Sbjct: 346 LALLEGNLVQNNQKLNRLEAELLAFSDDPDQMIELLRERFVALLQEEADVSNQLTRIENE 405
Query: 817 LEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEK 876
LE + Q + QA+ + L + + E +Q E+L T +E ++++ LA+ A+ ++
Sbjct: 406 LENSRQLSQKQADQLEKLKEQLAIAKEKASQQKEELETAKE----QVQKLLADYQAIAKE 461
Query: 877 WLPTLRNLVAQINETFSR-----NFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQL 931
+ AQ ++ F R N Q A + E L H + + +++ K R G +
Sbjct: 462 QEEQKTSYQAQQSQLFDRLDNLKNKQARAQSLENILRNHSNFYAGVKSVLQEKDRLGGII 521
Query: 932 EVLSAH 937
+S H
Sbjct: 522 GAVSEH 527
Score = 95 (38.5 bits), Expect = 7.8e-13, Sum P(3) = 7.8e-13
Identities = 48/232 (20%), Positives = 101/232 (43%)
Query: 25 EIELHNFMTF-DHLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSIGAY 83
EIE+ F +F D + V+GPNGSGKS++ ++ ALG + R +
Sbjct: 5 EIEIQGFKSFADKTKVVFDQGVTAVVGPNGSGKSNITESLRWALGESSVKSLRGGKMPDI 64
Query: 84 VKRGEES----GYIKISLRGDTKE-------EHLTIMRKIDTRNKSEWFFNGKVVPKGEV 132
+ G ES Y + + D + + + + R + SE+ +GK V ++
Sbjct: 65 IFAGTESRKPLNYASVVVTLDNHDGFIKDAGQEIRVERHVYRSGDSEYKIDGKKVRLRDI 124
Query: 133 LEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSK 192
++ + ++ + + Q +V E P + E+A G +++ ++
Sbjct: 125 HDLFLDTGLGRDSFS-IISQGKVEEIFNSKPEERRAIFEEAAG----------VLKYKTR 173
Query: 193 LKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEK---VESMKKKL 241
K E +++ D L++L+ + E + ++ + ++AE K +E +K +
Sbjct: 174 RKETESKLQQTQDNLDRLEDIIYELDNQIKPLEKQAENARKFLDLEGQRKAI 225
Score = 55 (24.4 bits), Expect = 4.3e-08, Sum P(3) = 4.3e-08
Identities = 17/72 (23%), Positives = 38/72 (52%)
Query: 188 EKSSKLKTIECTVKRNGDTLNQLKA--LNVEQEKD--VERVRQR-AELLEKVESMKKKLP 242
+K S L +E + +N LN+L+A L + D +E +R+R LL++ + +L
Sbjct: 341 DKESSLALLEGNLVQNNQKLNRLEAELLAFSDDPDQMIELLRERFVALLQEEADVSNQLT 400
Query: 243 WLKYDMKKAEYI 254
++ +++ + +
Sbjct: 401 RIENELENSRQL 412
Score = 46 (21.3 bits), Expect = 3.5e-07, Sum P(3) = 3.5e-07
Identities = 14/57 (24%), Positives = 29/57 (50%)
Query: 200 VKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESM----KKKLPWLKYDMKKAE 252
++ D NQL + E E + +++A+ LEK++ K+K K +++ A+
Sbjct: 389 LQEEADVSNQLTRIENELENSRQLSQKQADQLEKLKEQLAIAKEKASQQKEELETAK 445
Score = 46 (21.3 bits), Expect = 3.5e-07, Sum P(3) = 3.5e-07
Identities = 17/90 (18%), Positives = 42/90 (46%)
Query: 152 QDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLK 211
Q+ A L + EK+ + L + LV+ + KL +E + D +Q+
Sbjct: 319 QEAQARLAALEDKRNSLSKEKSDKESSLALLEGNLVQNNQKLNRLEAELLAFSDDPDQM- 377
Query: 212 ALNVEQEKDVERVRQRAELLEKVESMKKKL 241
+ + +E+ V +++ A++ ++ ++ +L
Sbjct: 378 -IELLRERFVALLQEEADVSNQLTRIENEL 406
Score = 46 (21.3 bits), Expect = 3.5e-07, Sum P(3) = 3.5e-07
Identities = 32/156 (20%), Positives = 61/156 (39%)
Query: 167 LEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQ 226
LE TE+ + Q + + +K KL+ T+K+ Q + L E KD +
Sbjct: 241 LESTEEELTQVQELLM--SYYQKREKLEEENQTLKK------QRQDLQAEMAKDQGSLMD 292
Query: 227 RAELLEKVESMKKKLPWLKYDMKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQ 286
L+ +E +KL K ++ + N+L SK K+
Sbjct: 293 LTSLISDLE---RKLALSK--LESEQVALNQQEAQARLAALEDKRNSL---SKEKSDKES 344
Query: 287 EKAILDGDCKKLSSLINENSKRRMDFLEKVDQGVQV 322
A+L+G+ + + +N + F + DQ +++
Sbjct: 345 SLALLEGNLVQNNQKLNRLEAELLAFSDDPDQMIEL 380
Score = 45 (20.9 bits), Expect = 7.8e-13, Sum P(3) = 7.8e-13
Identities = 14/35 (40%), Positives = 19/35 (54%)
Query: 389 LQKSEKEKI-LNQNKLTLRQCSDRLKDMEDKNNKL 422
L K E E++ LNQ ++ RL +EDK N L
Sbjct: 306 LSKLESEQVALNQ-----QEAQARLAALEDKRNSL 335
Score = 44 (20.5 bits), Expect = 7.2e-08, Sum P(2) = 7.2e-08
Identities = 17/78 (21%), Positives = 42/78 (53%)
Query: 167 LEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVER--- 223
LE+ +K + + + +L + + LKT++ + R ++L +K+ EQ + E+
Sbjct: 677 LEQLQKEIAE-----EEASLGSEEATLKTLQDEMARLTESLEAIKSQG-EQARIQEQGLF 730
Query: 224 --VRQRAELLEKVESMKK 239
+Q ++ +E++E++ K
Sbjct: 731 LAYQQTSQQVEELETLWK 748
Score = 41 (19.5 bits), Expect = 2.2e-07, Sum P(3) = 2.2e-07
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 209 QLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKK 250
Q+K E E E + Q ELL ++KL +KK
Sbjct: 233 QIKENKAELESTEEELTQVQELLMSYYQKREKLEEENQTLKK 274
Score = 38 (18.4 bits), Expect = 4.0e-12, Sum P(3) = 4.0e-12
Identities = 15/84 (17%), Positives = 31/84 (36%)
Query: 368 DKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALR 427
D++ +L + + Q Q R+Q+ Q + + K E++ ++L
Sbjct: 703 DEMARLTESLEAIKSQGEQARIQEQGLFLAYQQTSQQVEELETLWKLQEEEIDRLSEGDW 762
Query: 428 NSGAENIFEAYCWLQQHRHELNKE 451
+ EN E + + L E
Sbjct: 763 QADKENCQERLAAISSDKQNLEAE 786
Score = 37 (18.1 bits), Expect = 5.1e-12, Sum P(3) = 5.1e-12
Identities = 13/44 (29%), Positives = 25/44 (56%)
Query: 371 EKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKD 414
E+L +Q+ EL + QKR + E+ + L + + L+ ++ KD
Sbjct: 246 EEL-TQVQELLMSYYQKREKLEEENQTLKKQRQDLQ--AEMAKD 286
Score = 37 (18.1 bits), Expect = 5.1e-12, Sum P(3) = 5.1e-12
Identities = 16/63 (25%), Positives = 30/63 (47%)
Query: 368 DKIEKLGSQILEL--GVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHA 425
+++E Q+ +L QA K ++ + Q++L R D LK+ + + L +
Sbjct: 439 EELETAKEQVQKLLADYQAIAKEQEEQKTSYQAQQSQLFDRL--DNLKNKQARAQSLENI 496
Query: 426 LRN 428
LRN
Sbjct: 497 LRN 499
>UNIPROTKB|G3N365 [details] [associations]
symbol:SMC3 "Structural maintenance of chromosomes protein
3" species:9913 "Bos taurus" [GO:0051276 "chromosome organization"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR010935 Pfam:PF06470
SMART:SM00968 InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524
GO:GO:0005694 GO:GO:0051276 SUPFAM:SSF75553
GeneTree:ENSGT00580000081628 EMBL:DAAA02059205
Ensembl:ENSBTAT00000063829 Uniprot:G3N365
Length = 1216
Score = 135 (52.6 bits), Expect = 9.7e-13, Sum P(3) = 9.7e-13
Identities = 87/364 (23%), Positives = 150/364 (41%)
Query: 643 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRRE-MENHIN-LRKRK----LESIEKE- 695
+Q E R + +E KL+ + + RKR + +E +N LR+ + L + E
Sbjct: 807 LQQENRQLLNERIKLEGIITRVETYLNENLRKRLDQVEQELNELRETEGGTVLTATTSEL 866
Query: 696 DDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEK-HMASIEFDAKIREL 754
+ IN + + ++ DL+ K IK L + +W EK HM +I D K EL
Sbjct: 867 EAINKRVKDTMARSEDLDNSIDKTEAGIKELQKSME--RWKNMEKEHMDAINHDTK--EL 922
Query: 755 EFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDA--KRQAESIAFITPELEKEFLEMPT 812
E + + + L+ E+C K++ +A K Q S+ + +LE+ E+
Sbjct: 923 E-KMTNRQGMLLKKK---EECMKKIRELGSLPQEAFEKYQTLSLKQLFRKLEQCNTELKK 978
Query: 813 TIEELEAAIQD--NISQANSIFFLNQNILQE-YEHRQRQIEDLST-KQEADKKELKRFLA 868
+ A+ N S+ Q L Y+ + L K EA + K+
Sbjct: 979 YSHVNKKALDQFVNFSEQKEKLIKRQEELDRGYKSIMELMNVLELRKYEAIQLTFKQVSK 1038
Query: 869 EIDALKEKWLPTLR-NLVAQIN--ETFSRNFQEMAVAGEVSLDEHES--DFDKF-GILIK 922
+ +K +P + LV + E +E V E S D+F G+ I+
Sbjct: 1039 NFSEVFQKLVPGGKATLVMKKGDVEGSQLRMKEKGVVKERGSGSQSSVPSVDQFTGVGIR 1098
Query: 923 VKFRQSGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMF 982
V F Q E+ SGG++S+ + + ++Q PF + DEI+Q +D RK
Sbjct: 1099 VSFTGK-QGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFYLFDEIDQALDA-QHRKAV 1156
Query: 983 QQLV 986
++
Sbjct: 1157 SDMI 1160
Score = 126 (49.4 bits), Expect = 9.7e-13, Sum P(3) = 9.7e-13
Identities = 79/386 (20%), Positives = 148/386 (38%)
Query: 23 IIEIELHNFMTF-DHLICKP-GSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI 80
I ++ + F ++ D I P S+ N+++G NGSGKS+ AI L + L R
Sbjct: 3 IKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHL-RPEQR 61
Query: 81 GAYVKRGEESGYIK--ISLRGDTKEEHLTI------MRKIDTRNKSEWFFNGKVVPKGEV 132
A + G I + + D + L I +R++ K ++F + K+V K +V
Sbjct: 62 LALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKNDV 121
Query: 133 LEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSK 192
+ + + +N + Q ++ + A + L+ + G V E S
Sbjct: 122 MNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTR---VYDERKEESISL 178
Query: 193 LKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAE 252
+K E KR + +N+L E+ +E ++ +K + M++ L + Y+ + E
Sbjct: 179 MKETEG--KR--EKINELLKYIEERLHTLEEEKEELAQYQKWDKMRRALEYTIYNQELNE 234
Query: 253 YIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCK-KLSSLINENSKRRMD 311
L + + K ++ + K K+S++ E + +
Sbjct: 235 TRAKLDELSAKRETSGEKSRQLRDAQQDARDKMEDIERQVRELKTKISAMKEEKEQLSAE 294
Query: 312 FLEKVDQGVQVQGKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPAY-EPPHDKI 370
E++ Q +++ K K +LK R Q A EP + +
Sbjct: 295 RQEQIKQRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELAETEPKFNSV 354
Query: 371 -EKLGSQILELGVQANQKRLQKSEKE 395
EK I L QA Q+R K+
Sbjct: 355 KEKEERGIARLA-QATQERTDLYAKQ 379
Score = 74 (31.1 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 70/361 (19%), Positives = 154/361 (42%)
Query: 643 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEK-----EDD 697
+ + + IE + K + R+ I++ +++ K KR++ E ++R L+S+E E
Sbjct: 714 LMNQMQQIETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMEST 773
Query: 698 INTALAKL-VDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEF 756
+ A+L D + L+++ K + L EI + + I+ + I +E
Sbjct: 774 RESLKAELGTDLLSQLSLEDQK---RVDALNDEIRQLQQENRQLLNERIKLEGIITRVET 830
Query: 757 NLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAES---IAFITPELEKEFLEMPTT 813
L E+ +K ++ + L++ R+ E + T ELE + T
Sbjct: 831 YLN-------------ENLRKRLDQVEQELNEL-RETEGGTVLTATTSELEAINKRVKDT 876
Query: 814 IEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDAL 873
+ E + ++I + + Q ++ +++ +++ D D KEL++ L
Sbjct: 877 MARSED-LDNSIDKTEAGIKELQKSMERWKNMEKEHMDAINH---DTKELEKMTNRQGML 932
Query: 874 ---KEKWLPTLRNLVAQINETFSRNFQEMAVAGEV-SLDEHESDFDKFGILIKVKFRQ-- 927
KE+ + +R L + E F + +Q +++ L++ ++ K+ + K Q
Sbjct: 933 LKKKEECMKKIRELGSLPQEAFEK-YQTLSLKQLFRKLEQCNTELKKYSHVNKKALDQFV 991
Query: 928 --SGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQL 985
S Q E L Q +R +I+ L+++ +L + + + + N ++FQ+L
Sbjct: 992 NFSEQKEKL-IKRQEELDRGYKSIMELMNVLELRK--YEAIQLTFKQVSK-NFSEVFQKL 1047
Query: 986 V 986
V
Sbjct: 1048 V 1048
Score = 72 (30.4 bits), Expect = 7.2e-06, Sum P(2) = 7.2e-06
Identities = 21/75 (28%), Positives = 38/75 (50%)
Query: 802 ELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKK 861
EL+K+ + + ELEA + +N+ + +I + I E + Q++ + T+Q K
Sbjct: 677 ELQKDVRKAEEELGELEAKLNENLRR--NI----ERINNEIDQLMNQMQQIETQQRKFKA 730
Query: 862 ELKRFLAEIDALKEK 876
L+E+ LKEK
Sbjct: 731 SRDSILSEMKMLKEK 745
Score = 60 (26.2 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 37/155 (23%), Positives = 62/155 (40%)
Query: 362 AYEPPHDKIEKLGSQILEL-----GVQANQKRLQKSEKEKILNQNKLTLR--QCSDRLKD 414
A + DK+E + Q+ EL ++ +++L +E+I + KL L+ D L
Sbjct: 259 AQQDARDKMEDIERQVRELKTKISAMKEEKEQLSAERQEQIKQRTKLELKAKDLQDELAG 318
Query: 415 MEDKNNKLLHALRNSGAENIFEAYCWLQQHRHELN----KEAYGPVLLEVNVSNRAHANY 470
++ +LL R E I E L + + N KE G L R Y
Sbjct: 319 NSEQRKRLLKE-RQKLLEKIEEKQKELAETEPKFNSVKEKEERGIARLAQATQERTDL-Y 376
Query: 471 LEDHVGHYIWKSFITQDAGDRDFLAKNLKPFDVPI 505
+ G F +++ D+ ++ K LK D I
Sbjct: 377 AKQGRG----SQFTSKEERDK-WIKKELKSLDQAI 406
Score = 52 (23.4 bits), Expect = 9.7e-13, Sum P(3) = 9.7e-13
Identities = 33/165 (20%), Positives = 75/165 (45%)
Query: 370 IEKLGSQILELGVQANQKRLQ----KSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHA 425
IE++ ++I +L Q Q Q K+ ++ IL++ K+ LK+ ++ K
Sbjct: 704 IERINNEIDQLMNQMQQIETQQRKFKASRDSILSEMKM--------LKEKRQQSEKTFMP 755
Query: 426 LRNSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLEDHVGHYIWKSFIT 485
+ S +++ + ++ R L E +L ++++ ++ + L D + +
Sbjct: 756 KQRS-LQSLEASLHAMESTRESLKAELGTDLLSQLSLEDQKRVDALNDEIRQ------LQ 808
Query: 486 QDAGDRDFLAKNLKPFDV--PILNYVSNESSRKEPFQISEEMRAL 528
Q+ +R L + +K + + Y+ NE+ RK Q+ +E+ L
Sbjct: 809 QE--NRQLLNERIKLEGIITRVETYL-NENLRKRLDQVEQELNEL 850
Score = 37 (18.1 bits), Expect = 0.00078, Sum P(3) = 0.00078
Identities = 13/62 (20%), Positives = 35/62 (56%)
Query: 192 KLKTIECTV---KRNGDTLNQ-LKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYD 247
+LK+++ + KR +++ L+ +EK++E+ + + L +V++ ++L Y+
Sbjct: 398 ELKSLDQAINDKKRQIAAIHKDLEDTEANKEKNLEQYNKLDQDLNEVKARVEELDRKYYE 457
Query: 248 MK 249
+K
Sbjct: 458 VK 459
>FB|FBgn0027783 [details] [associations]
symbol:SMC2 "SMC2" species:7227 "Drosophila melanogaster"
[GO:0007062 "sister chromatid cohesion" evidence=ISS] [GO:0008278
"cohesin complex" evidence=ISS] [GO:0003677 "DNA binding"
evidence=ISS] [GO:0000796 "condensin complex" evidence=ISS;NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006310 "DNA
recombination" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0007076 "mitotic chromosome condensation" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007067 "mitosis" evidence=IMP] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR024704 InterPro:IPR010935
InterPro:IPR027120 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 EMBL:AE013599 GO:GO:0005524
GO:GO:0005634 GO:GO:0005875 GO:GO:0007052 GO:GO:0022008
GO:GO:0006281 GO:GO:0006310 GO:GO:0007076 GO:GO:0000796
GO:GO:0007062 SUPFAM:SSF75553 GeneTree:ENSGT00550000074857
KO:K06674 PANTHER:PTHR18937:SF9 OMA:CQNGKIP CTD:10592 HSSP:Q9X0R4
EMBL:AF179287 RefSeq:NP_610995.1 UniGene:Dm.2168 SMR:Q7KK96
STRING:Q7KK96 EnsemblMetazoa:FBtr0087461 GeneID:36653
KEGG:dme:Dmel_CG10212 UCSC:CG10212-RA FlyBase:FBgn0027783
InParanoid:Q7KK96 OrthoDB:EOG4P5HR3 GenomeRNAi:36653 NextBio:799708
Uniprot:Q7KK96
Length = 1179
Score = 132 (51.5 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 48/212 (22%), Positives = 98/212 (46%)
Query: 48 VIGPNGSGKSSLVCAIALALGGDTQLLGRATSIGAYVKRGEESGYIKISL---------- 97
+ G NGSGKS+++ +I LG RA+++ V + ++G K ++
Sbjct: 30 ITGLNGSGKSNILDSICFVLGISNLQNVRASALQDLVYKNGQAGITKATVTIVFDNTNPA 89
Query: 98 ---RGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQFLPQDR 154
+G K +++ R++ K+++ NGK+V +V + + VNN + Q +
Sbjct: 90 QCPQGYEKCREISVTRQVVVGGKNKFLINGKLVQNKKVQDFFCSIQLNVNNPNFLIMQGK 149
Query: 155 VCEFAKLSPVKLLEETEKAVGDPQLPVQHCA---LVEKSSKLKTIECTVKRNGDTLNQLK 211
+ + + P ++L E+A G Q + A L+EK + K E V + + L +L
Sbjct: 150 IQQVLNMKPKEVLSMVEEAAGTSQYKTKRDATKTLIEKK-ETKVRETKVLLDEEVLPKLV 208
Query: 212 ALNVEQE--KDVERVRQRAELLEKVESMKKKL 241
L E+ ++ +++ + + L ++ K L
Sbjct: 209 KLRQERSAYQEYQKICRDIDFLIRIHISAKYL 240
Score = 132 (51.5 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 59/244 (24%), Positives = 109/244 (44%)
Query: 677 EMENHIN-LRKRKLESIEKEDDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKW 735
EM + L ++ ++S EK+ T+ AK+VD A L + E+ EI K
Sbjct: 745 EMRERVKTLEQQIIDSREKQ---KTSQAKIVDIEAKLADAKGYRERELNAATNEIKVTK- 800
Query: 736 SYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAES 795
AEK A+ K RE EF Q E LQ S+ E KK+ + +L K + ++
Sbjct: 801 QRAEKSRANW----KKREQEFETLQLEITELQKSI--ETAKKQHQEMIDNLEKFKAELDA 854
Query: 796 IAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTK 855
+ + E E+ I+E + ++D + + + +L+E + + +++ +
Sbjct: 855 LKVNSSSAASEVTELEQAIKEQKDKLRDQNKEMRNQLVKKEKMLKENQEIELEVKKKENE 914
Query: 856 QE---ADKKELKRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHES 912
Q+ +D KE K+ + ++A K W+P +N N + + ++ AG L + +
Sbjct: 915 QKKISSDAKEAKKRMEALEA-KYPWIPEEKNCFGMKNTRYDYSKEDPHEAGN-KLAKMQE 972
Query: 913 DFDK 916
DK
Sbjct: 973 KKDK 976
Score = 125 (49.1 bits), Expect = 5.4e-12, Sum P(2) = 5.4e-12
Identities = 62/327 (18%), Positives = 138/327 (42%)
Query: 651 EDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAA 710
E E LQ E E+ ++ K++ +EM +++ K +L++++ ++A +++ +
Sbjct: 814 EQEFETLQLEITELQKSIETAKKQHQEMIDNLEKFKAELDALKVNS--SSAASEVTELEQ 871
Query: 711 DLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASL 770
+ Q+ K + K + ++V K K IE + K +E E +K++ A
Sbjct: 872 AIKEQKDKLRDQNKEMRNQLV--KKEKMLKENQEIELEVKKKENE-----QKKISSDA-- 922
Query: 771 HYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANS 830
++ KK +E + + E P A +Q+ +
Sbjct: 923 --KEAKKRMEALEAKYPWIPEEKNCFGMKNTRYDYS-KEDPHEAGNKLAKMQEKKDKMER 979
Query: 831 IFFLNQNILQEYEHRQRQIEDLSTKQEA---DKKELKRFLAEIDALKEKWLPTLRNLVAQ 887
LN N + + + ++ ++ DK+++K+ + ++D E+ L +
Sbjct: 980 T--LNMNAIMVLDREEENFKETERRRNIVAMDKEKIKKIIVKMD---EEEQDQLNKAATE 1034
Query: 888 INETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVLSAHHQSGGERSVS 947
+N FS F + E L+ ++ G+ IKV F + E L SGG++S+
Sbjct: 1035 VNTNFSGIFSSLLPGAEAKLNPVHTNGCLTGLEIKVGFNGIWK-ESLG--ELSGGQKSLV 1091
Query: 948 TILYLVSLQDLTNCPFRVVDEINQGMD 974
+ ++++ + P ++DE++ +D
Sbjct: 1092 ALSLVLAMLKFSPAPLYILDEVDAALD 1118
Score = 81 (33.6 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 70/271 (25%), Positives = 116/271 (42%)
Query: 644 QTEQRLIEDEAAKLQKE---REEIINIV--QIEKRKRREMENHINLRKRK-------LES 691
+T Q I D AKL RE +N +I+ K+R ++ N +KR+ LE
Sbjct: 765 KTSQAKIVDIEAKLADAKGYRERELNAATNEIKVTKQRAEKSRANWKKREQEFETLQLEI 824
Query: 692 IEKEDDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKI 751
E + I TA K + D N+++FK E+ L V S E A E K+
Sbjct: 825 TELQKSIETA-KKQHQEMID-NLEKFK--AELDALKVNSSSAASEVTELEQAIKEQKDKL 880
Query: 752 R----ELEFNLKQHEKLALQ-ASLHYEDCKKEVEHCRKHLSDAK---RQAESIAFITPEL 803
R E+ L + EK+ + + E KKE E +K SDAK ++ E++ P +
Sbjct: 881 RDQNKEMRNQLVKKEKMLKENQEIELEVKKKENEQ-KKISSDAKEAKKRMEALEAKYPWI 939
Query: 804 --EKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNI-LQEYEHRQRQIEDLSTKQEADK 860
EK M T + + +D N + + + E I L ++E K
Sbjct: 940 PEEKNCFGMKNT--RYDYSKEDPHEAGNKLAKMQEKKDKMERTLNMNAIMVLDREEENFK 997
Query: 861 K-ELKRFLAEIDALKEKWLPTLRNLVAQINE 890
+ E +R + +D KEK ++ ++ +++E
Sbjct: 998 ETERRRNIVAMD--KEK----IKKIIVKMDE 1022
Score = 78 (32.5 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 48/245 (19%), Positives = 107/245 (43%)
Query: 662 EEIINIVQIEKRKRREMENHINLRKRKLESIE---------KED-DINT-ALAKLVDQAA 710
EE+ I QIEK + RE+++ I ++++ SIE KE+ D+ L ++ A
Sbjct: 674 EELHAIKQIEK-EYREIDSEIAQVEKQIASIENQALAFNKMKENLDLRQHELTMCENRLA 732
Query: 711 DLNIQQFKYAIE-----IKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLA 765
QQ + IE +K L +I+ + ++ +AK+ + + ++ E A
Sbjct: 733 QTTFQQNQAEIEEMRERVKTLEQQIIDSREKQKTSQAKIVDIEAKLADAK-GYRERELNA 791
Query: 766 LQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNI 825
A+ + K+ E R + +++ E++ EL+K +E+ ++
Sbjct: 792 --ATNEIKVTKQRAEKSRANWKKREQEFETLQLEITELQKSIETAKKQHQEMIDNLEKFK 849
Query: 826 SQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLV 885
++ +++ + + E ++ I++ K KE++ L + KEK L + +
Sbjct: 850 AELDALKVNSSSAASEVTELEQAIKEQKDKLRDQNKEMRNQLVK----KEKMLKENQEIE 905
Query: 886 AQINE 890
++ +
Sbjct: 906 LEVKK 910
Score = 68 (29.0 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 51/233 (21%), Positives = 106/233 (45%)
Query: 643 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKR--REMENHINLRKR-KLESIEKEDDIN 699
++ + IED A + + N+ ++E + +EM+ I+ ++++E +
Sbjct: 249 VEANEHKIEDRIANCKATHAK--NLAEVESIENSVKEMQQQIDAEMGGSIKNLETQLSAK 306
Query: 700 TALAKLVD---QAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFD-AKIR-EL 754
AL +AA IQQ + I + + +E E+ +A E D AK++ E
Sbjct: 307 RALEATATGSLKAAQGTIQQDEKKIRMASKNIED-------DERALAKKEADMAKVQGEF 359
Query: 755 EFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKR-QAESIAFITPELEKEFLEMPTT 813
E +LK+ + +A YED +K++E + LS + +A ++ +++F E TT
Sbjct: 360 E-SLKEADARDSKA---YEDAQKKLEAVSQGLSTNENGEASTLQEQLIVAKEQFSEAQTT 415
Query: 814 IEELEAAIQ---------DNISQANSIFF-----LNQNILQEYEHRQRQIEDL 852
I+ E ++ + +Q N + L+ ++ E ++ +RQ++ L
Sbjct: 416 IKTSEIELRHTRGVLKQREGETQTNDAAYVKDKKLHDQLVVEIKNLERQLQSL 468
Score = 64 (27.6 bits), Expect = 2.0e-06, Sum P(3) = 2.0e-06
Identities = 76/330 (23%), Positives = 136/330 (41%)
Query: 645 TE-QRLIEDEAAKLQKEREEIINIVQIEKRKRREMENH-INLRKRKLESIEKEDDINTAL 702
TE ++ I+++ KL+ + +E+ N Q+ K+++ EN I L +K E+ +K+ +
Sbjct: 867 TELEQAIKEQKDKLRDQNKEMRN--QLVKKEKMLKENQEIELEVKKKENEQKKISSDAKE 924
Query: 703 AKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEK--HMASIEFDAKIRELEFNLKQ 760
AK +A + ++ + E KN + + ++ Y+++ H A + AK++E + +++
Sbjct: 925 AKKRMEALEA---KYPWIPEEKNCF-GMKNTRYDYSKEDPHEAGNKL-AKMQEKKDKMER 979
Query: 761 HEKL-ALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEA 819
+ A+ E+ KE E R ++ K + + I E E++ L T
Sbjct: 980 TLNMNAIMVLDREEENFKETERRRNIVAMDKEKIKKIIVKMDEEEQDQLNKAAT------ 1033
Query: 820 AIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLP 879
+ N S S H + L K + K L E+ +K L
Sbjct: 1034 EVNTNFSGIFSSLLPGAEAKLNPVHTNGCLTGLEIKVGFNGI-WKESLGELSG-GQKSLV 1091
Query: 880 TLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEV-----L 934
L ++A + FS + + EV S G ++K F S L V L
Sbjct: 1092 ALSLVLAMLK--FSP--APLYILDEVDAALDMSHTQNIGSMLKQHFTNSQFLIVSLKDGL 1147
Query: 935 SAH----HQSGGERSVSTILYLVSLQDLTN 960
H ++ E VSTI VS Q TN
Sbjct: 1148 FNHANVLFRTLFEEGVSTITRQVSRQATTN 1177
Score = 54 (24.1 bits), Expect = 2.0e-06, Sum P(3) = 2.0e-06
Identities = 13/56 (23%), Positives = 29/56 (51%)
Query: 368 DKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLL 423
D +EK +++ L V ++ + +E E+ + + K LR + +++ K K+L
Sbjct: 843 DNLEKFKAELDALKVNSSSAASEVTELEQAIKEQKDKLRDQNKEMRNQLVKKEKML 898
Score = 53 (23.7 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 42/238 (17%), Positives = 96/238 (40%)
Query: 654 AAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAADLN 713
+AK K+ E + + E + + N + L +E ++ + + +D +
Sbjct: 236 SAKYLKQCETLKTVEANEHKIEDRIANCKATHAKNLAEVESIENSVKEMQQQIDAEMGGS 295
Query: 714 IQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAK-IRELEFNLKQHEKLALQASLHY 772
I+ + + K L + A+ +I+ D K IR N++ E+ +
Sbjct: 296 IKNLETQLSAKRALEATATGSLKAAQ---GTIQQDEKKIRMASKNIEDDERALAKKEADM 352
Query: 773 EDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMP-TTIEELEAA-IQDNISQANS 830
+ E E ++ +DA+ +S A+ + + E + +T E EA+ +Q+ + A
Sbjct: 353 AKVQGEFESLKE--ADAR---DSKAYEDAQKKLEAVSQGLSTNENGEASTLQEQLIVAKE 407
Query: 831 IFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLVAQI 888
F Q ++ E R + ++E + + + L ++ + ++NL Q+
Sbjct: 408 QFSEAQTTIKTSEIELRHTRGVLKQREGETQTNDAAYVKDKKLHDQLVVEIKNLERQL 465
Score = 47 (21.6 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 31/148 (20%), Positives = 59/148 (39%)
Query: 187 VEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRA-ELLEKVES-MKKKLPWL 244
+++ LKT+E + D + KA + + +VE + E+ +++++ M + L
Sbjct: 240 LKQCETLKTVEANEHKIEDRIANCKATHAKNLAEVESIENSVKEMQQQIDAEMGGSIKNL 299
Query: 245 KYDM--KKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIE------GKKQ-EKAILDGDC 295
+ + K+A + SK IE KK+ + A + G+
Sbjct: 300 ETQLSAKRALEATATGSLKAAQGTIQQDEKKIRMASKNIEDDERALAKKEADMAKVQGEF 359
Query: 296 KKLSSLINENSKRRMDF---LEKVDQGV 320
+ L +SK D LE V QG+
Sbjct: 360 ESLKEADARDSKAYEDAQKKLEAVSQGL 387
Score = 45 (20.9 bits), Expect = 0.00089, Sum P(2) = 0.00089
Identities = 34/178 (19%), Positives = 65/178 (36%)
Query: 391 KSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAENIFEAYCWLQQHRHELNK 450
K +K+K+ +QNK Q + K +++ L + + + + R E +
Sbjct: 874 KEQKDKLRDQNKEMRNQLVKKEKMLKENQEIELEVKKKENEQKKISSDAKEAKKRMEALE 933
Query: 451 EAYGPVLLEVNVSNRAHANY---LED-H-VGHYIWKSFITQDAGDRDFLAKNLKPFDVPI 505
Y + E N + Y ED H G+ + K +D +R + D
Sbjct: 934 AKYPWIPEEKNCFGMKNTRYDYSKEDPHEAGNKLAKMQEKKDKMERTLNMNAIMVLDREE 993
Query: 506 LNYVSNESSRKEPFQISEEMRALGISARLDQVFDAPHAVKEVLISQFGLDSSYIGSKE 563
N+ E R E+++ + + ++ A EV + G+ SS + E
Sbjct: 994 ENFKETERRRNIVAMDKEKIKKIIVKMDEEEQDQLNKAATEVNTNFSGIFSSLLPGAE 1051
>SGD|S000001927 [details] [associations]
symbol:SMC2 "Subunit of the condensin complex" species:4932
"Saccharomyces cerevisiae" [GO:0006281 "DNA repair" evidence=IEA]
[GO:0003680 "AT DNA binding" evidence=IDA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0030261 "chromosome
condensation" evidence=IEA] [GO:0000796 "condensin complex"
evidence=IEA] [GO:0000799 "nuclear condensin complex"
evidence=ISS;TAS;IPI] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005694 "chromosome" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0070058 "tRNA gene clustering" evidence=IMP]
[GO:0007076 "mitotic chromosome condensation" evidence=IEA;IMP;TAS]
[GO:0051301 "cell division" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IDA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IDA] [GO:0000217 "DNA secondary
structure binding" evidence=IDA] [GO:0000070 "mitotic sister
chromatid segregation" evidence=TAS] [GO:0051276 "chromosome
organization" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=IEA] InterPro:IPR024704 InterPro:IPR010935
InterPro:IPR027120 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 SGD:S000001927 Pfam:PF02463 GO:GO:0005739
GO:GO:0005524 GO:GO:0051301 GO:GO:0006281 EMBL:D50617 EMBL:BK006940
GO:GO:0016887 GO:GO:0006310 GO:GO:0003690 GO:GO:0007076
GO:GO:0003680 GO:GO:0000799 GO:GO:0070058 GO:GO:0007062
eggNOG:COG1196 SUPFAM:SSF75553 EMBL:U05820
GeneTree:ENSGT00550000074857 KO:K06674 PANTHER:PTHR18937:SF9
GO:GO:0000217 HOGENOM:HOG000163792 OrthoDB:EOG4P2T9B PIR:A56157
RefSeq:NP_116687.1 ProteinModelPortal:P38989 SMR:P38989
DIP:DIP-2983N IntAct:P38989 MINT:MINT-435495 STRING:P38989
PaxDb:P38989 EnsemblFungi:YFR031C GeneID:850589 KEGG:sce:YFR031C
CYGD:YFR031c OMA:SECESAE NextBio:966434 Genevestigator:P38989
GermOnline:YFR031C Uniprot:P38989
Length = 1170
Score = 137 (53.3 bits), Expect = 1.3e-12, Sum P(3) = 1.3e-12
Identities = 50/212 (23%), Positives = 96/212 (45%)
Query: 44 RLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSIGAYV-KRGEESGYIKISLR---- 98
+ N + G NGSGKS+++ AI LG + RA+S+ + KRG+ +G K S+
Sbjct: 26 QFNAITGLNGSGKSNILDAICFVLGIASMSTVRASSLQDLIYKRGQ-AGVTKASVTIVFD 84
Query: 99 ---------GDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQF 149
G T +++ R++ S++ NG P+ VL++ + + +NN
Sbjct: 85 NTDKSNSPIGFTNSPQISVTRQVVLGGTSKYLINGHRAPQQSVLQLFQSVQLNINNPNFL 144
Query: 150 LPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQ 209
+ Q ++ + + P ++L E+A G + EK+ + + + T + TL
Sbjct: 145 IMQGKITKVLNMKPSEILSLIEEAAGTKMFEDRR----EKAERTMSKKETKLQENRTL-- 198
Query: 210 LKALNVEQEKDVERVRQRAELLEKVESMKKKL 241
L E E +E++R + + +S + L
Sbjct: 199 ---LTEEIEPKLEKLRNEKRMFLEFQSTQTDL 227
Score = 136 (52.9 bits), Expect = 1.3e-12, Sum P(3) = 1.3e-12
Identities = 67/339 (19%), Positives = 146/339 (43%)
Query: 652 DEAAKLQKEREEIINIVQIEKRKRREMENHINLRKR---KLESIEKEDDIN-TALAKLVD 707
D+ +KL + ++E+ + + + + E E +L + + E + E D N T L +
Sbjct: 788 DKGSKLNELKKELKLLAKELEEQESESERKYDLFQNLELETEQLSSELDSNKTLLHNHLK 847
Query: 708 QAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELE--FNLKQHEK-- 763
L ++ +I+ + ++V+ + E+ ++ D ++ ELE KQ EK
Sbjct: 848 SIESLKLENSDLEGKIRGVEDDLVTVQTELNEEKKRLMDIDDELNELETLIKKKQDEKKS 907
Query: 764 --LALQASLH-YEDCKKEVEHCRKHLSDAKRQAESIA-F-ITPELEK--EFLEMPTTIEE 816
L LQ +H K + K + D +++ E + F + + K E +++ T E
Sbjct: 908 SELELQKLVHDLNKYKSNTNNMEKIIEDLRQKHEFLEDFDLVRNIVKQNEGIDLDT-YRE 966
Query: 817 LEAAIQDNISQANSIFFLN-QNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKE 875
+ + + N N+++ E ++ ++ + E DK +++ +++++ K
Sbjct: 967 RSKQLNEKFQELRKKVNPNIMNMIENVEKKEAALKTMIKTIEKDKMKIQETISKLNEYKR 1026
Query: 876 KWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVLS 935
+ TL ++ F F ++ L E G+ +KVK G + S
Sbjct: 1027 E---TLVKTWEKVTLDFGNIFADLLPNSFAKLVPCEGKDVTQGLEVKVKL---GNIWKES 1080
Query: 936 AHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMD 974
SGG+RS+ + +++L P ++DE++ +D
Sbjct: 1081 LIELSGGQRSLIALSLIMALLQFRPAPMYILDEVDAALD 1119
Score = 82 (33.9 bits), Expect = 3.7e-07, Sum P(3) = 3.7e-07
Identities = 55/252 (21%), Positives = 110/252 (43%)
Query: 650 IEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKE-DDINTALAKLVDQ 708
I+ + L+K +EE+ I + K + + +N K++L+ + KE ++ + + D
Sbjct: 761 IKTKQMSLKKCQEEVSTIEKDMKEYDSDKGSKLNELKKELKLLAKELEEQESESERKYDL 820
Query: 709 AADLNIQQFKYAIEI---KNLL------VEIVSCKWSYAEKHMASIEFDAKIRELEFNLK 759
+L ++ + + E+ K LL +E + + S E + +E D + E N
Sbjct: 821 FQNLELETEQLSSELDSNKTLLHNHLKSIESLKLENSDLEGKIRGVEDDLVTVQTELN-- 878
Query: 760 QHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAE-SIAFITPELEKEFLEMPTTIEELE 818
EK L + +D E+E K D K+ +E + + +L K + +E
Sbjct: 879 -EEKKRL---MDIDDELNELETLIKKKQDEKKSSELELQKLVHDLNK----YKSNTNNME 930
Query: 819 AAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWL 878
I+D + Q + FL L +Q + DL T +E K+ ++F L++K
Sbjct: 931 KIIED-LRQKHE--FLEDFDLVRNIVKQNEGIDLDTYRERSKQLNEKF----QELRKKVN 983
Query: 879 PTLRNLVAQINE 890
P + N++ + +
Sbjct: 984 PNIMNMIENVEK 995
Score = 76 (31.8 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 55/285 (19%), Positives = 122/285 (42%)
Query: 647 QRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLV 706
Q+ IE A L EE+ +K + +++ +NL KL+ ++ D N + ++++
Sbjct: 687 QKQIETIQADLNHVTEEL-QTQYATSQKTKTIQSDLNLSLHKLDLAKRNLDANPS-SQII 744
Query: 707 DQAADL--NIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFD--AKIRELEFNLKQHE 762
+ ++ +I + + I+ K + ++ + S EK M + D +K+ EL+ LK
Sbjct: 745 ARNEEILRDIGECENEIKTKQMSLKKCQEEVSTIEKDMKEYDSDKGSKLNELKKELKLLA 804
Query: 763 KLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQ 822
K E+ + E E + + + E ++ EL+ + ++ +E+
Sbjct: 805 K-------ELEEQESESERKYDLFQNLELETEQLS---SELDSNKTLLHNHLKSIESLKL 854
Query: 823 DNISQANSIFFLNQNILQ---EYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLP 879
+N I + +++ E ++++ D+ + + EL+ + + K+
Sbjct: 855 ENSDLEGKIRGVEDDLVTVQTELNEEKKRLMDI----DDELNELETLIKKKQDEKKSSEL 910
Query: 880 TLRNLVAQINETFSRNFQEMAVAGEVSLDEHE--SDFDKFGILIK 922
L+ LV +N+ + N M E +HE DFD ++K
Sbjct: 911 ELQKLVHDLNK-YKSNTNNMEKIIEDLRQKHEFLEDFDLVRNIVK 954
Score = 74 (31.1 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 57/279 (20%), Positives = 113/279 (40%)
Query: 644 QTEQRLIEDEAAKLQKEREEI---INIVQIEKRKRREMENHINLRKRKLESIEKE-DDIN 699
+T +++ + K +E + + + ++++K K E I+ + K + E +
Sbjct: 257 ETRMKMLNEFVKKTSEEIDSLNEDVEEIKLQKEKELHKEGTISKLENKENGLLNEISRLK 316
Query: 700 TALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYA--EKHMASIEFD-AKIRELEF 756
T+L+ V+ D + EI + +++ K +YA EK ++ +K R+L
Sbjct: 317 TSLSIKVENLNDTTEKSKALESEIASSSAKLIEKKSAYANTEKDYKMVQEQLSKQRDL-- 374
Query: 757 NLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAE--SIAFITPELEKEFLEMPT-T 813
K+ E+L + L+ AK + S+A ++ E L+ T
Sbjct: 375 -YKRKEELVSTLTTGISSTGAADGGYNAQLAKAKTELNEVSLAIKKSSMKMELLKKELLT 433
Query: 814 IE-ELEAAIQDN------ISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRF 866
IE +L+ A +DN + Q + L EY +I+DL +++ K +
Sbjct: 434 IEPKLKEATKDNELNVKHVKQCQETCDKLRARLVEYGFDPSRIKDLKQREDKLKSHYYQT 493
Query: 867 LAEIDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEV 905
+ LK + + NL + + NF+ V G V
Sbjct: 494 CKNSEYLKRR----VTNLEFNYTKPYP-NFEASFVHGVV 527
Score = 53 (23.7 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 18/81 (22%), Positives = 40/81 (49%)
Query: 369 KIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRN 428
KI + ++ + + N+++ + + + LN+ + +++ D K E + KL+H L
Sbjct: 862 KIRGVEDDLVTVQTELNEEKKRLMDIDDELNELETLIKKKQDEKKSSELELQKLVHDLNK 921
Query: 429 --SGAENIFEAYCWLQQHRHE 447
S N+ + L+Q +HE
Sbjct: 922 YKSNTNNMEKIIEDLRQ-KHE 941
Score = 52 (23.4 bits), Expect = 0.00043, Sum P(3) = 0.00043
Identities = 37/164 (22%), Positives = 80/164 (48%)
Query: 643 MQTEQRLI-EDEAAKLQKEREEIIN-IVQIEKRKRREMENHINLRKRKLESIEKEDDINT 700
+Q E+ L E +KL+ + ++N I +++ ++EN +N K +++E E I +
Sbjct: 286 LQKEKELHKEGTISKLENKENGLLNEISRLKTSLSIKVEN-LNDTTEKSKALESE--IAS 342
Query: 701 ALAKLVDQ-AADLNIQQ-FKYAIEI----KNLLV---EIVSCKWS-YAEKHMASIEFDAK 750
+ AKL+++ +A N ++ +K E ++L E+VS + + A ++A+
Sbjct: 343 SSAKLIEKKSAYANTEKDYKMVQEQLSKQRDLYKRKEELVSTLTTGISSTGAADGGYNAQ 402
Query: 751 IRELEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAE 794
+ + + L + ++S+ E KKE+ L +A + E
Sbjct: 403 LAKAKTELNEVSLAIKKSSMKMELLKKELLTIEPKLKEATKDNE 446
Score = 47 (21.6 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 16/76 (21%), Positives = 34/76 (44%)
Query: 166 LLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVR 225
LL E + + V++ L + + K K +E + + L + K+ EKD + V+
Sbjct: 308 LLNEISRLKTSLSIKVEN--LNDTTEKSKALESEIASSSAKLIEKKSAYANTEKDYKMVQ 365
Query: 226 QRAELLEKVESMKKKL 241
++ + K++L
Sbjct: 366 EQLSKQRDLYKRKEEL 381
Score = 41 (19.5 bits), Expect = 0.00085, Sum P(2) = 0.00085
Identities = 9/30 (30%), Positives = 16/30 (53%)
Query: 412 LKDMEDKNNKLLHALRNSGAENIFEAYCWL 441
+ D + + N + L SG NI +A C++
Sbjct: 20 ITDWDPQFNAIT-GLNGSGKSNILDAICFV 48
Score = 38 (18.4 bits), Expect = 1.3e-12, Sum P(3) = 1.3e-12
Identities = 19/84 (22%), Positives = 38/84 (45%)
Query: 368 DKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALR 427
+K + L S+I + +K+ + EK + L + D K E+ + L +
Sbjct: 331 EKSKALESEIASSSAKLIEKKSAYANTEKDYKMVQEQLSKQRDLYKRKEELVSTLTTGIS 390
Query: 428 NSGA-ENIFEAYCWLQQHRHELNK 450
++GA + + A L + + ELN+
Sbjct: 391 STGAADGGYNAQ--LAKAKTELNE 412
Score = 37 (18.1 bits), Expect = 0.00043, Sum P(3) = 0.00043
Identities = 13/72 (18%), Positives = 30/72 (41%)
Query: 793 AESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDL 852
A+ I F P++ + + + + E + + ++ +Q+Y Q+QIE +
Sbjct: 638 AKKITF-HPKIRARSITLQGDVYDPEGTLSGGSRNTSESLLVD---IQKYNQIQKQIETI 693
Query: 853 STKQEADKKELK 864
+EL+
Sbjct: 694 QADLNHVTEELQ 705
>UNIPROTKB|Q90988 [details] [associations]
symbol:SMC2 "Structural maintenance of chromosomes protein
2" species:9031 "Gallus gallus" [GO:0000796 "condensin complex"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0007076 "mitotic chromosome
condensation" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR024704 InterPro:IPR010935 InterPro:IPR027120
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0005694 GO:GO:0051301 GO:GO:0007067 GO:GO:0006281
GO:GO:0006310 GO:GO:0030261 GO:GO:0007062 SUPFAM:SSF75553 KO:K06674
PANTHER:PTHR18937:SF9 EMBL:X80792 IPI:IPI00579121 PIR:A54817
RefSeq:NP_990561.1 UniGene:Gga.4066 ProteinModelPortal:Q90988
PRIDE:Q90988 GeneID:396156 KEGG:gga:396156 CTD:10592
HOVERGEN:HBG106605 NextBio:20816212 Uniprot:Q90988
Length = 1189
Score = 129 (50.5 bits), Expect = 1.9e-12, Sum P(3) = 1.9e-12
Identities = 50/205 (24%), Positives = 92/205 (44%)
Query: 46 NLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSIGAYVKRGEESGYIK--ISLRGDTKE 103
N + G NGSGKS+++ +I LG RA+S+ V + ++G K +S+ D +
Sbjct: 28 NAITGLNGSGKSNILDSICFLLGISNLSQVRASSLQDLVYKNGQAGVNKATVSITFDNSD 87
Query: 104 -----------EHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQFLPQ 152
+ +TI R++ ++++ NG V ++ + VNN + Q
Sbjct: 88 KKNSPLGFENNDEITITRQVIVGGRNKYLINGMNASNNRVQDLFGSVGLNVNNPHFLIMQ 147
Query: 153 DRVCEFAKLSPVKLLEETEKAVGDPQLPVQ----HCALVEKSSKLKTIECTVKRN-GDTL 207
++ + + P ++L E+A G + H + +K SKL I + TL
Sbjct: 148 GQITKVLNMKPTEILAMIEEAAGTRMYECKKITAHKTIEKKESKLDEIRRIITEEISPTL 207
Query: 208 NQLK---ALNVEQEK---DVERVRQ 226
+LK A +E +K +VE +R+
Sbjct: 208 EKLKEARASYLEYQKMTREVENLRR 232
Score = 129 (50.5 bits), Expect = 1.9e-12, Sum P(3) = 1.9e-12
Identities = 71/349 (20%), Positives = 146/349 (41%)
Query: 650 IEDEAAKLQKEREEIINIVQIEKRKRREMENHI-NLRKRKLESI---EKEDDINTALAKL 705
I++ KL +++ + + K K++E+E + L + K E ++ + A+A L
Sbjct: 791 IKNAQQKLNSAKKKADDSSRKMKEKQQEVEALVLELEQLKQEQASYKQQSEAAQQAIASL 850
Query: 706 VDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLA 765
+Q + L + K +KN E+ S K E+ + + AK ++E +Q+ +L
Sbjct: 851 KEQVSALEAEAVKTRESLKNAENELSSEKGLMEER---TKDIKAKSAKIEKYREQNNELQ 907
Query: 766 LQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIE-------ELE 818
L + D K + S + + +I E E F + TT + E
Sbjct: 908 LSINALEHDINKYQQETADASSTLDKLLKEYKWIASEKEL-FGQADTTYDFEANNPKETG 966
Query: 819 AAIQDNISQANSIF-FLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKW 877
+Q +++ + LN + + + DL K+ + + + LA I+ L K
Sbjct: 967 QKLQKLLTKKEKLEKSLNMRAMNLLSEAEERYNDLMKKKRMVENDKIKILATIEELDRKK 1026
Query: 878 LPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQS-GQLEVLSA 936
L ++N+ F F + + L + K IL ++FR G + +
Sbjct: 1027 NKALHIAWEKVNKDFGSIFSMLLPGAKAMLVPSK----KQNILDGLEFRVGLGDIWKENL 1082
Query: 937 HHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQL 985
SGG+RS++ + ++++ P ++DE++ +D + + + Q L
Sbjct: 1083 TELSGGQRSLAALSLILAILLFKPAPIYILDEVDAALDLSHTQNIGQML 1131
Score = 87 (35.7 bits), Expect = 3.3e-08, Sum P(3) = 3.3e-08
Identities = 54/266 (20%), Positives = 121/266 (45%)
Query: 656 KLQKEREEIINIV--QIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAADLN 713
K ++ E+ + I Q+E ++ E+ N N+ + K + ++++ ++ + A+L+
Sbjct: 679 KTMRDAEDELKIKTSQLEATEK-ELANLKNMAE-KYQHLKQQWEMKSEEAELLQT----K 732
Query: 714 IQQFKYAIEIKNLLV---EIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHE----KLAL 766
IQQ Y + ++LL I C+ + + + + + + + LE +K E K
Sbjct: 733 IQQSAYHKQQEDLLALKKTIAECEETLKKTEESQRKAEEEYKALENKMKNAEAERGKEIK 792
Query: 767 QASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNIS 826
A KK+ + + + + +++ E++ ELE+ E + ++ EAA Q S
Sbjct: 793 NAQQKLNSAKKKADDSSRKMKEKQQEVEALVL---ELEQLKQEQASYKQQSEAAQQAIAS 849
Query: 827 QANSIFFLNQNILQEYEHRQRQIEDLSTKQ---EADKKELKRFLAEIDALKEKWLPTLRN 883
+ L ++ E + +LS+++ E K++K A+I+ +E+ L+
Sbjct: 850 LKEQVSALEAEAVKTRESLKNAENELSSEKGLMEERTKDIKAKSAKIEKYREQ-NNELQL 908
Query: 884 LVAQINETFSRNFQEMAVAGEVSLDE 909
+ + ++ QE A A +LD+
Sbjct: 909 SINALEHDINKYQQETADASS-TLDK 933
Score = 66 (28.3 bits), Expect = 1.6e-05, Sum P(3) = 1.6e-05
Identities = 19/69 (27%), Positives = 34/69 (49%)
Query: 188 EKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAE----LLEKVESMKKKLPW 243
E + I T ++ D + +LK EQE + + +Q + L E ES++ K P+
Sbjct: 446 EDQEAFEAIRKTKEKLQDEMKKLKYEEAEQEAHLAKKKQLSSEISSLRELCESIEAKHPY 505
Query: 244 LKYDMKKAE 252
L+++ K E
Sbjct: 506 LRFEYKNPE 514
Score = 61 (26.5 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 45/244 (18%), Positives = 104/244 (42%)
Query: 646 EQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKL 705
++++ E A +K +E I + EK+ E ++ + +++ D + L
Sbjct: 260 KKKIFESMAENEKKVKELAQQIEETEKKNNEEFGAKLHSLEAAFSELQRVDA--KVRSDL 317
Query: 706 VDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASI--------EFDAKIRELEFN 757
+ +LN ++ + IK + E + ++ EK + I E K E +
Sbjct: 318 DHRKQNLNSEENRLKELIKIMQEEFKA--FTSKEKEIKKIKEGLNGLQEESKKDAEALAS 375
Query: 758 LKQHEKLALQASLHYEDCKK------EVEHCRKHLSDAKRQAESIAFITPELEKEFLEMP 811
+QH A+ A L D + ++ C+ +S A +A+ ++E
Sbjct: 376 AQQHFN-AVSAGLSSNDSGQGTSLADQMMTCKNEISKAATEAKQAQMKLKYAQQELKTKQ 434
Query: 812 TTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEID 871
+++++ + +++ +A + LQ+ E ++ + E+ +QEA + K+ +EI
Sbjct: 435 AEVKKMDGSYKED-QEAFEAIRKTKEKLQD-EMKKLKYEE--AEQEAHLAKKKQLSSEIS 490
Query: 872 ALKE 875
+L+E
Sbjct: 491 SLRE 494
Score = 52 (23.4 bits), Expect = 1.9e-12, Sum P(3) = 1.9e-12
Identities = 16/54 (29%), Positives = 33/54 (61%)
Query: 383 QANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNK----LLHALRNSGAE 432
QAN+K++ +S E N+ K+ ++ + ++++ E KNN+ LH+L + +E
Sbjct: 257 QANKKKIFESMAE---NEKKV--KELAQQIEETEKKNNEEFGAKLHSLEAAFSE 305
Score = 52 (23.4 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 37/155 (23%), Positives = 67/155 (43%)
Query: 105 HLT-IMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLT---QFLPQ--DRVCEF 158
H+T I+ K+ T +E ++ K LE T++ + N+ Q L Q + E
Sbjct: 670 HVTPILSKLKTMRDAE----DELKIKTSQLEATEKELANLKNMAEKYQHLKQQWEMKSEE 725
Query: 159 AKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKAL-NVEQ 217
A+L K+ + + L ++ + E LK E + +R + + KAL N +
Sbjct: 726 AELLQTKIQQSAYHKQQEDLLALKK-TIAECEETLKKTEES-QRKAE--EEYKALENKMK 781
Query: 218 EKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAE 252
+ ER ++ +K+ S KKK MK+ +
Sbjct: 782 NAEAERGKEIKNAQQKLNSAKKKADDSSRKMKEKQ 816
Score = 52 (23.4 bits), Expect = 0.00076, Sum P(3) = 0.00076
Identities = 13/58 (22%), Positives = 33/58 (56%)
Query: 368 DKIEK-LGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLH 424
+K+EK L + + L +A ++ +K++++ +K+ + +++++ K NK LH
Sbjct: 977 EKLEKSLNMRAMNLLSEAEERYNDLMKKKRMVENDKIKILAT---IEELDRKKNKALH 1031
Score = 50 (22.7 bits), Expect = 0.00016, Sum P(3) = 0.00016
Identities = 50/243 (20%), Positives = 101/243 (41%)
Query: 644 QTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALA 703
+TE++ E+ AKL + +++ + R ++++ RK+ L S E++ L
Sbjct: 283 ETEKKNNEEFGAKLHSLEAAFSELQRVDAKVRSDLDH----RKQNLNS---EENRLKELI 335
Query: 704 KLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIE--FDAKIRELEFNLK-Q 760
K++ + + K +IK L + AE +AS + F+A L N Q
Sbjct: 336 KIMQEEFKAFTSKEKEIKKIKEGLNGLQEESKKDAEA-LASAQQHFNAVSAGLSSNDSGQ 394
Query: 761 HEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAA 820
LA Q CK E+ K ++AK+ + + EL+ + E +++++ +
Sbjct: 395 GTSLADQMMT----CKNEIS---KAATEAKQAQMKLKYAQQELKTKQAE----VKKMDGS 443
Query: 821 IQDNISQANSIFFLNQNILQE-----YEHRQRQIEDLSTKQEADKKELKRFLAEIDALKE 875
+++ +I + + E YE +++ KQ + + R L E K
Sbjct: 444 YKEDQEAFEAIRKTKEKLQDEMKKLKYEEAEQEAHLAKKKQLSSEISSLRELCESIEAKH 503
Query: 876 KWL 878
+L
Sbjct: 504 PYL 506
Score = 46 (21.3 bits), Expect = 1.1e-11, Sum P(4) = 1.1e-11
Identities = 13/47 (27%), Positives = 25/47 (53%)
Query: 375 SQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNK 421
+++L+ +Q Q K ++E +L K T+ +C + LK E+ K
Sbjct: 726 AELLQTKIQ--QSAYHK-QQEDLLALKK-TIAECEETLKKTEESQRK 768
Score = 43 (20.2 bits), Expect = 1.1e-11, Sum P(4) = 1.1e-11
Identities = 13/45 (28%), Positives = 22/45 (48%)
Query: 209 QLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAEY 253
+LK E +K ++ E E + K+KL + +MKK +Y
Sbjct: 429 ELKTKQAEVKKMDGSYKEDQEAFEAIRKTKEKL---QDEMKKLKY 470
>UNIPROTKB|A7Z065 [details] [associations]
symbol:SMC3 "Structural maintenance of chromosomes protein
3" species:9913 "Bos taurus" [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0036033 "mediator complex binding"
evidence=IEA] [GO:0034991 "nuclear meiotic cohesin complex"
evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] [GO:0019827 "stem cell
maintenance" evidence=IEA] [GO:0016363 "nuclear matrix"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0007126 "meiosis" evidence=IEA] [GO:0007052 "mitotic spindle
organization" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0000922 "spindle
pole" evidence=IEA] [GO:0000800 "lateral element" evidence=IEA]
[GO:0000785 "chromatin" evidence=IEA] [GO:0051276 "chromosome
organization" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR010935 Pfam:PF06470 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0007126 GO:GO:0005737
GO:GO:0007165 GO:GO:0007052 GO:GO:0000785 GO:GO:0016363
GO:GO:0000922 GO:GO:0032876 GO:GO:0051276 GO:GO:0000800
SUPFAM:SSF75553 GO:GO:0030893 OMA:NKVLEHF IPI:IPI00698576
UniGene:Bt.5290 HOVERGEN:HBG039849 GeneTree:ENSGT00580000081628
EMBL:DAAA02059205 EMBL:BC153263 SMR:A7Z065 STRING:A7Z065
Ensembl:ENSBTAT00000046231 InParanoid:A7Z065 Uniprot:A7Z065
Length = 1217
Score = 132 (51.5 bits), Expect = 2.0e-12, Sum P(3) = 2.0e-12
Identities = 86/365 (23%), Positives = 151/365 (41%)
Query: 643 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRRE-MENHIN-LRKRK----LESIEKE- 695
+Q E R + +E KL+ + + RKR + +E +N LR+ + L + E
Sbjct: 807 LQQENRQLLNERIKLEGIITRVETYLNENLRKRLDQVEQELNELRETEGGTVLTATTSEL 866
Query: 696 DDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEK-HMASIEFDAKIREL 754
+ IN + + ++ DL+ K IK L + +W EK HM +I D K EL
Sbjct: 867 EAINKRVKDTMARSEDLDNSIDKTEAGIKELQKSME--RWKNMEKEHMDAINHDTK--EL 922
Query: 755 EFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDA--KRQAESIAFITPELEKEFLEMPT 812
E + + + L+ E+C K++ +A K Q S+ + +LE+ E+
Sbjct: 923 E-KMTNRQGMLLKKK---EECMKKIRELGSLPQEAFEKYQTLSLKQLFRKLEQCNTELKK 978
Query: 813 TIEELEAAIQD--NISQANSIFFLNQNILQE-YEHRQRQIEDLST-KQEADKKELKRFLA 868
+ A+ N S+ Q L Y+ + L K EA + K+
Sbjct: 979 YSHVNKKALDQFVNFSEQKEKLIKRQEELDRGYKSIMELMNVLELRKYEAIQLTFKQVSK 1038
Query: 869 EIDALKEKWLP----TLRNLVAQINETFSRNFQEMAVAGEVSLDEHES--DFDKF-GILI 921
+ +K +P TL + + S++ E + E S D+F G+ I
Sbjct: 1039 NFSEVFQKLVPGGKATLVMKKGDVEGSQSQDEGEGSGESERGSGSQSSVPSVDQFTGVGI 1098
Query: 922 KVKFRQSGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKM 981
+V F Q E+ SGG++S+ + + ++Q PF + DEI+Q +D RK
Sbjct: 1099 RVSFTGK-QGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFYLFDEIDQALDA-QHRKA 1156
Query: 982 FQQLV 986
++
Sbjct: 1157 VSDMI 1161
Score = 126 (49.4 bits), Expect = 2.0e-12, Sum P(3) = 2.0e-12
Identities = 79/386 (20%), Positives = 148/386 (38%)
Query: 23 IIEIELHNFMTF-DHLICKP-GSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI 80
I ++ + F ++ D I P S+ N+++G NGSGKS+ AI L + L R
Sbjct: 3 IKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHL-RPEQR 61
Query: 81 GAYVKRGEESGYIK--ISLRGDTKEEHLTI------MRKIDTRNKSEWFFNGKVVPKGEV 132
A + G I + + D + L I +R++ K ++F + K+V K +V
Sbjct: 62 LALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKNDV 121
Query: 133 LEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSK 192
+ + + +N + Q ++ + A + L+ + G V E S
Sbjct: 122 MNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTR---VYDERKEESISL 178
Query: 193 LKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAE 252
+K E KR + +N+L E+ +E ++ +K + M++ L + Y+ + E
Sbjct: 179 MKETEG--KR--EKINELLKYIEERLHTLEEEKEELAQYQKWDKMRRALEYTIYNQELNE 234
Query: 253 YIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCK-KLSSLINENSKRRMD 311
L + + K ++ + K K+S++ E + +
Sbjct: 235 TRAKLDELSAKRETSGEKSRQLRDAQQDARDKMEDIERQVRELKTKISAMKEEKEQLSAE 294
Query: 312 FLEKVDQGVQVQGKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPAY-EPPHDKI 370
E++ Q +++ K K +LK R Q A EP + +
Sbjct: 295 RQEQIKQRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELAETEPKFNSV 354
Query: 371 -EKLGSQILELGVQANQKRLQKSEKE 395
EK I L QA Q+R K+
Sbjct: 355 KEKEERGIARLA-QATQERTDLYAKQ 379
Score = 74 (31.1 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 70/361 (19%), Positives = 154/361 (42%)
Query: 643 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEK-----EDD 697
+ + + IE + K + R+ I++ +++ K KR++ E ++R L+S+E E
Sbjct: 714 LMNQMQQIETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMEST 773
Query: 698 INTALAKL-VDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEF 756
+ A+L D + L+++ K + L EI + + I+ + I +E
Sbjct: 774 RESLKAELGTDLLSQLSLEDQK---RVDALNDEIRQLQQENRQLLNERIKLEGIITRVET 830
Query: 757 NLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAES---IAFITPELEKEFLEMPTT 813
L E+ +K ++ + L++ R+ E + T ELE + T
Sbjct: 831 YLN-------------ENLRKRLDQVEQELNEL-RETEGGTVLTATTSELEAINKRVKDT 876
Query: 814 IEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDAL 873
+ E + ++I + + Q ++ +++ +++ D D KEL++ L
Sbjct: 877 MARSED-LDNSIDKTEAGIKELQKSMERWKNMEKEHMDAINH---DTKELEKMTNRQGML 932
Query: 874 ---KEKWLPTLRNLVAQINETFSRNFQEMAVAGEV-SLDEHESDFDKFGILIKVKFRQ-- 927
KE+ + +R L + E F + +Q +++ L++ ++ K+ + K Q
Sbjct: 933 LKKKEECMKKIRELGSLPQEAFEK-YQTLSLKQLFRKLEQCNTELKKYSHVNKKALDQFV 991
Query: 928 --SGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQL 985
S Q E L Q +R +I+ L+++ +L + + + + N ++FQ+L
Sbjct: 992 NFSEQKEKL-IKRQEELDRGYKSIMELMNVLELRK--YEAIQLTFKQVSK-NFSEVFQKL 1047
Query: 986 V 986
V
Sbjct: 1048 V 1048
Score = 72 (30.4 bits), Expect = 7.2e-06, Sum P(2) = 7.2e-06
Identities = 21/75 (28%), Positives = 38/75 (50%)
Query: 802 ELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKK 861
EL+K+ + + ELEA + +N+ + +I + I E + Q++ + T+Q K
Sbjct: 677 ELQKDVRKAEEELGELEAKLNENLRR--NI----ERINNEIDQLMNQMQQIETQQRKFKA 730
Query: 862 ELKRFLAEIDALKEK 876
L+E+ LKEK
Sbjct: 731 SRDSILSEMKMLKEK 745
Score = 60 (26.2 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 37/155 (23%), Positives = 62/155 (40%)
Query: 362 AYEPPHDKIEKLGSQILEL-----GVQANQKRLQKSEKEKILNQNKLTLR--QCSDRLKD 414
A + DK+E + Q+ EL ++ +++L +E+I + KL L+ D L
Sbjct: 259 AQQDARDKMEDIERQVRELKTKISAMKEEKEQLSAERQEQIKQRTKLELKAKDLQDELAG 318
Query: 415 MEDKNNKLLHALRNSGAENIFEAYCWLQQHRHELN----KEAYGPVLLEVNVSNRAHANY 470
++ +LL R E I E L + + N KE G L R Y
Sbjct: 319 NSEQRKRLLKE-RQKLLEKIEEKQKELAETEPKFNSVKEKEERGIARLAQATQERTDL-Y 376
Query: 471 LEDHVGHYIWKSFITQDAGDRDFLAKNLKPFDVPI 505
+ G F +++ D+ ++ K LK D I
Sbjct: 377 AKQGRG----SQFTSKEERDK-WIKKELKSLDQAI 406
Score = 52 (23.4 bits), Expect = 2.0e-12, Sum P(3) = 2.0e-12
Identities = 33/165 (20%), Positives = 75/165 (45%)
Query: 370 IEKLGSQILELGVQANQKRLQ----KSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHA 425
IE++ ++I +L Q Q Q K+ ++ IL++ K+ LK+ ++ K
Sbjct: 704 IERINNEIDQLMNQMQQIETQQRKFKASRDSILSEMKM--------LKEKRQQSEKTFMP 755
Query: 426 LRNSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLEDHVGHYIWKSFIT 485
+ S +++ + ++ R L E +L ++++ ++ + L D + +
Sbjct: 756 KQRS-LQSLEASLHAMESTRESLKAELGTDLLSQLSLEDQKRVDALNDEIRQ------LQ 808
Query: 486 QDAGDRDFLAKNLKPFDV--PILNYVSNESSRKEPFQISEEMRAL 528
Q+ +R L + +K + + Y+ NE+ RK Q+ +E+ L
Sbjct: 809 QE--NRQLLNERIKLEGIITRVETYL-NENLRKRLDQVEQELNEL 850
>UNIPROTKB|E2R7T4 [details] [associations]
symbol:SMC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051276 "chromosome organization"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR010935 Pfam:PF06470
SMART:SM00968 InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524
GO:GO:0005694 GO:GO:0051276 SUPFAM:SSF75553 KO:K06669 OMA:NKVLEHF
CTD:9126 GeneTree:ENSGT00580000081628 EMBL:AAEX03015526
RefSeq:XP_851818.2 ProteinModelPortal:E2R7T4
Ensembl:ENSCAFT00000017137 GeneID:486886 KEGG:cfa:486886
Uniprot:E2R7T4
Length = 1217
Score = 132 (51.5 bits), Expect = 2.0e-12, Sum P(3) = 2.0e-12
Identities = 86/365 (23%), Positives = 151/365 (41%)
Query: 643 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRRE-MENHIN-LRKRK----LESIEKE- 695
+Q E R + +E KL+ + + RKR + +E +N LR+ + L + E
Sbjct: 807 LQQENRQLLNERIKLEGIITRVETYLNENLRKRLDQVEQELNELRETEGGTVLTATTSEL 866
Query: 696 DDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEK-HMASIEFDAKIREL 754
+ IN + + ++ DL+ K IK L + +W EK HM +I D K EL
Sbjct: 867 EAINKRVKDTMARSEDLDNSIDKTEAGIKELQKSME--RWKNMEKEHMDAINHDTK--EL 922
Query: 755 EFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDA--KRQAESIAFITPELEKEFLEMPT 812
E + + + L+ E+C K++ +A K Q S+ + +LE+ E+
Sbjct: 923 E-KMTNRQGMLLKKK---EECMKKIRELGSLPQEAFEKYQTLSLKQLFRKLEQCNTELKK 978
Query: 813 TIEELEAAIQD--NISQANSIFFLNQNILQE-YEHRQRQIEDLST-KQEADKKELKRFLA 868
+ A+ N S+ Q L Y+ + L K EA + K+
Sbjct: 979 YSHVNKKALDQFVNFSEQKEKLIKRQEELDRGYKSIMELMNVLELRKYEAIQLTFKQVSK 1038
Query: 869 EIDALKEKWLP----TLRNLVAQINETFSRNFQEMAVAGEVSLDEHES--DFDKF-GILI 921
+ +K +P TL + + S++ E + E S D+F G+ I
Sbjct: 1039 NFSEVFQKLVPGGKATLVMKKGDVEGSQSQDEGEGSGESERGSGSQSSVPSVDQFTGVGI 1098
Query: 922 KVKFRQSGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKM 981
+V F Q E+ SGG++S+ + + ++Q PF + DEI+Q +D RK
Sbjct: 1099 RVSFTGK-QGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFYLFDEIDQALDA-QHRKA 1156
Query: 982 FQQLV 986
++
Sbjct: 1157 VSDMI 1161
Score = 126 (49.4 bits), Expect = 2.0e-12, Sum P(3) = 2.0e-12
Identities = 79/386 (20%), Positives = 148/386 (38%)
Query: 23 IIEIELHNFMTF-DHLICKP-GSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI 80
I ++ + F ++ D I P S+ N+++G NGSGKS+ AI L + L R
Sbjct: 3 IKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHL-RPEQR 61
Query: 81 GAYVKRGEESGYIK--ISLRGDTKEEHLTI------MRKIDTRNKSEWFFNGKVVPKGEV 132
A + G I + + D + L I +R++ K ++F + K+V K +V
Sbjct: 62 LALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKNDV 121
Query: 133 LEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSK 192
+ + + +N + Q ++ + A + L+ + G V E S
Sbjct: 122 MNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTR---VYDERKEESISL 178
Query: 193 LKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAE 252
+K E KR + +N+L E+ +E ++ +K + M++ L + Y+ + E
Sbjct: 179 MKETEG--KR--EKINELLKYIEERLHTLEEEKEELAQYQKWDKMRRALEYTIYNQELNE 234
Query: 253 YIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCK-KLSSLINENSKRRMD 311
L + + K ++ + K K+S++ E + +
Sbjct: 235 TRAKLDELSAKRETSGEKSRQLRDAQQDARDKMEDIERQVRELKTKISAMKEEKEQLSAE 294
Query: 312 FLEKVDQGVQVQGKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPAY-EPPHDKI 370
E++ Q +++ K K +LK R Q A EP + +
Sbjct: 295 RQEQIKQRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELAETEPKFNSV 354
Query: 371 -EKLGSQILELGVQANQKRLQKSEKE 395
EK I L QA Q+R K+
Sbjct: 355 KEKEERGIARLA-QATQERTDLYAKQ 379
Score = 74 (31.1 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 70/361 (19%), Positives = 154/361 (42%)
Query: 643 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEK-----EDD 697
+ + + IE + K + R+ I++ +++ K KR++ E ++R L+S+E E
Sbjct: 714 LMNQMQQIETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMEST 773
Query: 698 INTALAKL-VDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEF 756
+ A+L D + L+++ K + L EI + + I+ + I +E
Sbjct: 774 RESLKAELGTDLLSQLSLEDQK---RVDALNDEIRQLQQENRQLLNERIKLEGIITRVET 830
Query: 757 NLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAES---IAFITPELEKEFLEMPTT 813
L E+ +K ++ + L++ R+ E + T ELE + T
Sbjct: 831 YLN-------------ENLRKRLDQVEQELNEL-RETEGGTVLTATTSELEAINKRVKDT 876
Query: 814 IEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDAL 873
+ E + ++I + + Q ++ +++ +++ D D KEL++ L
Sbjct: 877 MARSED-LDNSIDKTEAGIKELQKSMERWKNMEKEHMDAINH---DTKELEKMTNRQGML 932
Query: 874 ---KEKWLPTLRNLVAQINETFSRNFQEMAVAGEV-SLDEHESDFDKFGILIKVKFRQ-- 927
KE+ + +R L + E F + +Q +++ L++ ++ K+ + K Q
Sbjct: 933 LKKKEECMKKIRELGSLPQEAFEK-YQTLSLKQLFRKLEQCNTELKKYSHVNKKALDQFV 991
Query: 928 --SGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQL 985
S Q E L Q +R +I+ L+++ +L + + + + N ++FQ+L
Sbjct: 992 NFSEQKEKL-IKRQEELDRGYKSIMELMNVLELRK--YEAIQLTFKQVSK-NFSEVFQKL 1047
Query: 986 V 986
V
Sbjct: 1048 V 1048
Score = 72 (30.4 bits), Expect = 7.2e-06, Sum P(2) = 7.2e-06
Identities = 21/75 (28%), Positives = 38/75 (50%)
Query: 802 ELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKK 861
EL+K+ + + ELEA + +N+ + +I + I E + Q++ + T+Q K
Sbjct: 677 ELQKDVRKAEEELGELEAKLNENLRR--NI----ERINNEIDQLMNQMQQIETQQRKFKA 730
Query: 862 ELKRFLAEIDALKEK 876
L+E+ LKEK
Sbjct: 731 SRDSILSEMKMLKEK 745
Score = 60 (26.2 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 37/155 (23%), Positives = 62/155 (40%)
Query: 362 AYEPPHDKIEKLGSQILEL-----GVQANQKRLQKSEKEKILNQNKLTLR--QCSDRLKD 414
A + DK+E + Q+ EL ++ +++L +E+I + KL L+ D L
Sbjct: 259 AQQDARDKMEDIERQVRELKTKISAMKEEKEQLSAERQEQIKQRTKLELKAKDLQDELAG 318
Query: 415 MEDKNNKLLHALRNSGAENIFEAYCWLQQHRHELN----KEAYGPVLLEVNVSNRAHANY 470
++ +LL R E I E L + + N KE G L R Y
Sbjct: 319 NSEQRKRLLKE-RQKLLEKIEEKQKELAETEPKFNSVKEKEERGIARLAQATQERTDL-Y 376
Query: 471 LEDHVGHYIWKSFITQDAGDRDFLAKNLKPFDVPI 505
+ G F +++ D+ ++ K LK D I
Sbjct: 377 AKQGRG----SQFTSKEERDK-WIKKELKSLDQAI 406
Score = 52 (23.4 bits), Expect = 2.0e-12, Sum P(3) = 2.0e-12
Identities = 33/165 (20%), Positives = 75/165 (45%)
Query: 370 IEKLGSQILELGVQANQKRLQ----KSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHA 425
IE++ ++I +L Q Q Q K+ ++ IL++ K+ LK+ ++ K
Sbjct: 704 IERINNEIDQLMNQMQQIETQQRKFKASRDSILSEMKM--------LKEKRQQSEKTFMP 755
Query: 426 LRNSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLEDHVGHYIWKSFIT 485
+ S +++ + ++ R L E +L ++++ ++ + L D + +
Sbjct: 756 KQRS-LQSLEASLHAMESTRESLKAELGTDLLSQLSLEDQKRVDALNDEIRQ------LQ 808
Query: 486 QDAGDRDFLAKNLKPFDV--PILNYVSNESSRKEPFQISEEMRAL 528
Q+ +R L + +K + + Y+ NE+ RK Q+ +E+ L
Sbjct: 809 QE--NRQLLNERIKLEGIITRVETYL-NENLRKRLDQVEQELNEL 850
>UNIPROTKB|Q9UQE7 [details] [associations]
symbol:SMC3 "Structural maintenance of chromosomes protein
3" species:9606 "Homo sapiens" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0000800 "lateral element"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0019827 "stem cell maintenance" evidence=IEA] [GO:0034991
"nuclear meiotic cohesin complex" evidence=IEA] [GO:0036033
"mediator complex binding" evidence=IEA] [GO:0000775 "chromosome,
centromeric region" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0007052 "mitotic spindle organization"
evidence=IEP] [GO:0007062 "sister chromatid cohesion"
evidence=IMP;NAS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0016363
"nuclear matrix" evidence=IDA] [GO:0008278 "cohesin complex"
evidence=NAS] [GO:0003777 "microtubule motor activity"
evidence=NAS] [GO:0007165 "signal transduction" evidence=IDA]
[GO:0000922 "spindle pole" evidence=IDA] [GO:0045502 "dynein
binding" evidence=IDA] [GO:0007126 "meiosis" evidence=IDA]
[GO:0006275 "regulation of DNA replication" evidence=IMP]
[GO:0000785 "chromatin" evidence=IDA] [GO:0030893 "meiotic cohesin
complex" evidence=IDA] [GO:0005604 "basement membrane"
evidence=TAS] [GO:0007067 "mitosis" evidence=TAS] [GO:0005634
"nucleus" evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0007091 "metaphase/anaphase
transition of mitotic cell cycle" evidence=TAS] [GO:0032876
"negative regulation of DNA endoreduplication" evidence=IMP]
InterPro:IPR010935 Pfam:PF06470 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0007126 GO:GO:0005737
Reactome:REACT_115566 GO:GO:0007165 GO:GO:0005654
Reactome:REACT_21300 GO:GO:0000775 GO:GO:0051301 GO:GO:0007052
EMBL:CH471066 GO:GO:0006281 GO:GO:0000785 Reactome:REACT_111183
GO:GO:0016363 GO:GO:0005604 GO:GO:0000922 GO:GO:0003777
GO:GO:0032876 GO:GO:0007091 GO:GO:0000236 GO:GO:0045502
GO:GO:0000800 GO:GO:0007062 eggNOG:COG1196 SUPFAM:SSF75553
Orphanet:199 GO:GO:0030893 EMBL:AL359260 HOGENOM:HOG000166512
KO:K06669 OMA:NKVLEHF CTD:9126 HOVERGEN:HBG039849 OrthoDB:EOG4B5P4C
EMBL:AF020043 EMBL:AK289771 EMBL:AF067163 EMBL:AJ005015
IPI:IPI00219420 RefSeq:NP_005436.1 UniGene:Hs.24485
ProteinModelPortal:Q9UQE7 SMR:Q9UQE7 DIP:DIP-29200N IntAct:Q9UQE7
MINT:MINT-3083875 STRING:Q9UQE7 PhosphoSite:Q9UQE7 DMDM:29337005
PaxDb:Q9UQE7 PRIDE:Q9UQE7 Ensembl:ENST00000361804 GeneID:9126
KEGG:hsa:9126 UCSC:uc001kze.3 GeneCards:GC10P112318 HGNC:HGNC:2468
HPA:HPA037411 MIM:606062 MIM:610759 neXtProt:NX_Q9UQE7
PharmGKB:PA26966 InParanoid:Q9UQE7 ChiTaRS:SMC3 GenomeRNAi:9126
NextBio:34209 Bgee:Q9UQE7 CleanEx:HS_SMC3 Genevestigator:Q9UQE7
GermOnline:ENSG00000108055 Uniprot:Q9UQE7
Length = 1217
Score = 132 (51.5 bits), Expect = 2.0e-12, Sum P(3) = 2.0e-12
Identities = 86/365 (23%), Positives = 151/365 (41%)
Query: 643 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRRE-MENHIN-LRKRK----LESIEKE- 695
+Q E R + +E KL+ + + RKR + +E +N LR+ + L + E
Sbjct: 807 LQQENRQLLNERIKLEGIITRVETYLNENLRKRLDQVEQELNELRETEGGTVLTATTSEL 866
Query: 696 DDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEK-HMASIEFDAKIREL 754
+ IN + + ++ DL+ K IK L + +W EK HM +I D K EL
Sbjct: 867 EAINKRVKDTMARSEDLDNSIDKTEAGIKELQKSME--RWKNMEKEHMDAINHDTK--EL 922
Query: 755 EFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDA--KRQAESIAFITPELEKEFLEMPT 812
E + + + L+ E+C K++ +A K Q S+ + +LE+ E+
Sbjct: 923 E-KMTNRQGMLLKKK---EECMKKIRELGSLPQEAFEKYQTLSLKQLFRKLEQCNTELKK 978
Query: 813 TIEELEAAIQD--NISQANSIFFLNQNILQE-YEHRQRQIEDLST-KQEADKKELKRFLA 868
+ A+ N S+ Q L Y+ + L K EA + K+
Sbjct: 979 YSHVNKKALDQFVNFSEQKEKLIKRQEELDRGYKSIMELMNVLELRKYEAIQLTFKQVSK 1038
Query: 869 EIDALKEKWLP----TLRNLVAQINETFSRNFQEMAVAGEVSLDEHES--DFDKF-GILI 921
+ +K +P TL + + S++ E + E S D+F G+ I
Sbjct: 1039 NFSEVFQKLVPGGKATLVMKKGDVEGSQSQDEGEGSGESERGSGSQSSVPSVDQFTGVGI 1098
Query: 922 KVKFRQSGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKM 981
+V F Q E+ SGG++S+ + + ++Q PF + DEI+Q +D RK
Sbjct: 1099 RVSFTGK-QGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFYLFDEIDQALDA-QHRKA 1156
Query: 982 FQQLV 986
++
Sbjct: 1157 VSDMI 1161
Score = 126 (49.4 bits), Expect = 2.0e-12, Sum P(3) = 2.0e-12
Identities = 79/386 (20%), Positives = 148/386 (38%)
Query: 23 IIEIELHNFMTF-DHLICKP-GSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI 80
I ++ + F ++ D I P S+ N+++G NGSGKS+ AI L + L R
Sbjct: 3 IKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHL-RPEQR 61
Query: 81 GAYVKRGEESGYIK--ISLRGDTKEEHLTI------MRKIDTRNKSEWFFNGKVVPKGEV 132
A + G I + + D + L I +R++ K ++F + K+V K +V
Sbjct: 62 LALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKNDV 121
Query: 133 LEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSK 192
+ + + +N + Q ++ + A + L+ + G V E S
Sbjct: 122 MNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTR---VYDERKEESISL 178
Query: 193 LKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAE 252
+K E KR + +N+L E+ +E ++ +K + M++ L + Y+ + E
Sbjct: 179 MKETEG--KR--EKINELLKYIEERLHTLEEEKEELAQYQKWDKMRRALEYTIYNQELNE 234
Query: 253 YIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCK-KLSSLINENSKRRMD 311
L + + K ++ + K K+S++ E + +
Sbjct: 235 TRAKLDELSAKRETSGEKSRQLRDAQQDARDKMEDIERQVRELKTKISAMKEEKEQLSAE 294
Query: 312 FLEKVDQGVQVQGKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPAY-EPPHDKI 370
E++ Q +++ K K +LK R Q A EP + +
Sbjct: 295 RQEQIKQRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELAETEPKFNSV 354
Query: 371 -EKLGSQILELGVQANQKRLQKSEKE 395
EK I L QA Q+R K+
Sbjct: 355 KEKEERGIARLA-QATQERTDLYAKQ 379
Score = 74 (31.1 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 70/361 (19%), Positives = 154/361 (42%)
Query: 643 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEK-----EDD 697
+ + + IE + K + R+ I++ +++ K KR++ E ++R L+S+E E
Sbjct: 714 LMNQMQQIETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMEST 773
Query: 698 INTALAKL-VDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEF 756
+ A+L D + L+++ K + L EI + + I+ + I +E
Sbjct: 774 RESLKAELGTDLLSQLSLEDQK---RVDALNDEIRQLQQENRQLLNERIKLEGIITRVET 830
Query: 757 NLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAES---IAFITPELEKEFLEMPTT 813
L E+ +K ++ + L++ R+ E + T ELE + T
Sbjct: 831 YLN-------------ENLRKRLDQVEQELNEL-RETEGGTVLTATTSELEAINKRVKDT 876
Query: 814 IEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDAL 873
+ E + ++I + + Q ++ +++ +++ D D KEL++ L
Sbjct: 877 MARSED-LDNSIDKTEAGIKELQKSMERWKNMEKEHMDAINH---DTKELEKMTNRQGML 932
Query: 874 ---KEKWLPTLRNLVAQINETFSRNFQEMAVAGEV-SLDEHESDFDKFGILIKVKFRQ-- 927
KE+ + +R L + E F + +Q +++ L++ ++ K+ + K Q
Sbjct: 933 LKKKEECMKKIRELGSLPQEAFEK-YQTLSLKQLFRKLEQCNTELKKYSHVNKKALDQFV 991
Query: 928 --SGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQL 985
S Q E L Q +R +I+ L+++ +L + + + + N ++FQ+L
Sbjct: 992 NFSEQKEKL-IKRQEELDRGYKSIMELMNVLELRK--YEAIQLTFKQVSK-NFSEVFQKL 1047
Query: 986 V 986
V
Sbjct: 1048 V 1048
Score = 72 (30.4 bits), Expect = 7.2e-06, Sum P(2) = 7.2e-06
Identities = 21/75 (28%), Positives = 38/75 (50%)
Query: 802 ELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKK 861
EL+K+ + + ELEA + +N+ + +I + I E + Q++ + T+Q K
Sbjct: 677 ELQKDVRKAEEELGELEAKLNENLRR--NI----ERINNEIDQLMNQMQQIETQQRKFKA 730
Query: 862 ELKRFLAEIDALKEK 876
L+E+ LKEK
Sbjct: 731 SRDSILSEMKMLKEK 745
Score = 60 (26.2 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 37/155 (23%), Positives = 62/155 (40%)
Query: 362 AYEPPHDKIEKLGSQILEL-----GVQANQKRLQKSEKEKILNQNKLTLR--QCSDRLKD 414
A + DK+E + Q+ EL ++ +++L +E+I + KL L+ D L
Sbjct: 259 AQQDARDKMEDIERQVRELKTKISAMKEEKEQLSAERQEQIKQRTKLELKAKDLQDELAG 318
Query: 415 MEDKNNKLLHALRNSGAENIFEAYCWLQQHRHELN----KEAYGPVLLEVNVSNRAHANY 470
++ +LL R E I E L + + N KE G L R Y
Sbjct: 319 NSEQRKRLLKE-RQKLLEKIEEKQKELAETEPKFNSVKEKEERGIARLAQATQERTDL-Y 376
Query: 471 LEDHVGHYIWKSFITQDAGDRDFLAKNLKPFDVPI 505
+ G F +++ D+ ++ K LK D I
Sbjct: 377 AKQGRG----SQFTSKEERDK-WIKKELKSLDQAI 406
Score = 52 (23.4 bits), Expect = 2.0e-12, Sum P(3) = 2.0e-12
Identities = 33/165 (20%), Positives = 75/165 (45%)
Query: 370 IEKLGSQILELGVQANQKRLQ----KSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHA 425
IE++ ++I +L Q Q Q K+ ++ IL++ K+ LK+ ++ K
Sbjct: 704 IERINNEIDQLMNQMQQIETQQRKFKASRDSILSEMKM--------LKEKRQQSEKTFMP 755
Query: 426 LRNSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLEDHVGHYIWKSFIT 485
+ S +++ + ++ R L E +L ++++ ++ + L D + +
Sbjct: 756 KQRS-LQSLEASLHAMESTRESLKAELGTDLLSQLSLEDQKRVDALNDEIRQ------LQ 808
Query: 486 QDAGDRDFLAKNLKPFDV--PILNYVSNESSRKEPFQISEEMRAL 528
Q+ +R L + +K + + Y+ NE+ RK Q+ +E+ L
Sbjct: 809 QE--NRQLLNERIKLEGIITRVETYL-NENLRKRLDQVEQELNEL 850
>UNIPROTKB|Q5R4K5 [details] [associations]
symbol:SMC3 "Structural maintenance of chromosomes protein
3" species:9601 "Pongo abelii" [GO:0000785 "chromatin"
evidence=ISS] [GO:0006275 "regulation of DNA replication"
evidence=ISS] [GO:0030893 "meiotic cohesin complex" evidence=ISS]
InterPro:IPR010935 Pfam:PF06470 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0007126 GO:GO:0005737
GO:GO:0007165 GO:GO:0051301 GO:GO:0007067 GO:GO:0007052
GO:GO:0006275 GO:GO:0006281 GO:GO:0000785 GO:GO:0016363
GO:GO:0000922 GO:GO:0032876 GO:GO:0051276 GO:GO:0000800
SUPFAM:SSF75553 GO:GO:0030893 KO:K06669 OMA:NKVLEHF CTD:9126
HOVERGEN:HBG039849 GeneTree:ENSGT00580000081628 EMBL:CR861241
RefSeq:NP_001126947.1 UniGene:Pab.18502 ProteinModelPortal:Q5R4K5
SMR:Q5R4K5 PRIDE:Q5R4K5 Ensembl:ENSPPYT00000003185 GeneID:100173965
KEGG:pon:100173965 InParanoid:Q5R4K5 Uniprot:Q5R4K5
Length = 1217
Score = 132 (51.5 bits), Expect = 2.0e-12, Sum P(3) = 2.0e-12
Identities = 86/365 (23%), Positives = 151/365 (41%)
Query: 643 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRRE-MENHIN-LRKRK----LESIEKE- 695
+Q E R + +E KL+ + + RKR + +E +N LR+ + L + E
Sbjct: 807 LQQENRQLLNERIKLEGIITRVETYLNENLRKRLDQVEQELNELRETEGGTVLTATTSEL 866
Query: 696 DDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEK-HMASIEFDAKIREL 754
+ IN + + ++ DL+ K IK L + +W EK HM +I D K EL
Sbjct: 867 EAINKRVKDTMARSEDLDNSIDKTEAGIKELQKSME--RWKNMEKEHMDAINHDTK--EL 922
Query: 755 EFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDA--KRQAESIAFITPELEKEFLEMPT 812
E + + + L+ E+C K++ +A K Q S+ + +LE+ E+
Sbjct: 923 E-KMTNRQGMLLKKK---EECMKKIRELGSLPQEAFEKYQTLSLKQLFRKLEQCNTELKK 978
Query: 813 TIEELEAAIQD--NISQANSIFFLNQNILQE-YEHRQRQIEDLST-KQEADKKELKRFLA 868
+ A+ N S+ Q L Y+ + L K EA + K+
Sbjct: 979 YSHVNKKALDQFVNFSEQKEKLIKRQEELDRGYKSIMELMNVLELRKYEAIQLTFKQVSK 1038
Query: 869 EIDALKEKWLP----TLRNLVAQINETFSRNFQEMAVAGEVSLDEHES--DFDKF-GILI 921
+ +K +P TL + + S++ E + E S D+F G+ I
Sbjct: 1039 NFSEVFQKLVPGGKATLVMKKGDVEGSQSQDEGEGSGESERGSGSQSSVPSVDQFTGVGI 1098
Query: 922 KVKFRQSGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKM 981
+V F Q E+ SGG++S+ + + ++Q PF + DEI+Q +D RK
Sbjct: 1099 RVSFTGK-QGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFYLFDEIDQALDA-QHRKA 1156
Query: 982 FQQLV 986
++
Sbjct: 1157 VSDMI 1161
Score = 126 (49.4 bits), Expect = 2.0e-12, Sum P(3) = 2.0e-12
Identities = 79/386 (20%), Positives = 148/386 (38%)
Query: 23 IIEIELHNFMTF-DHLICKP-GSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI 80
I ++ + F ++ D I P S+ N+++G NGSGKS+ AI L + L R
Sbjct: 3 IKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHL-RPEQR 61
Query: 81 GAYVKRGEESGYIK--ISLRGDTKEEHLTI------MRKIDTRNKSEWFFNGKVVPKGEV 132
A + G I + + D + L I +R++ K ++F + K+V K +V
Sbjct: 62 LALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKNDV 121
Query: 133 LEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSK 192
+ + + +N + Q ++ + A + L+ + G V E S
Sbjct: 122 MNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTR---VYDERKEESISL 178
Query: 193 LKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAE 252
+K E KR + +N+L E+ +E ++ +K + M++ L + Y+ + E
Sbjct: 179 MKETEG--KR--EKINELLKYIEERLHTLEEEKEELAQYQKWDKMRRALEYTIYNQELNE 234
Query: 253 YIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCK-KLSSLINENSKRRMD 311
L + + K ++ + K K+S++ E + +
Sbjct: 235 TRAKLDELSAKRETSGEKSRQLRDAQQDARDKMEDIERQVRELKTKISAMKEEKEQLSAE 294
Query: 312 FLEKVDQGVQVQGKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPAY-EPPHDKI 370
E++ Q +++ K K +LK R Q A EP + +
Sbjct: 295 RQEQIKQRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELAETEPKFNSV 354
Query: 371 -EKLGSQILELGVQANQKRLQKSEKE 395
EK I L QA Q+R K+
Sbjct: 355 KEKEERGIARLA-QATQERTDLYAKQ 379
Score = 74 (31.1 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 70/361 (19%), Positives = 154/361 (42%)
Query: 643 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEK-----EDD 697
+ + + IE + K + R+ I++ +++ K KR++ E ++R L+S+E E
Sbjct: 714 LMNQMQQIETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMEST 773
Query: 698 INTALAKL-VDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEF 756
+ A+L D + L+++ K + L EI + + I+ + I +E
Sbjct: 774 RESLKAELGTDLLSQLSLEDQK---RVDALNDEIRQLQQENRQLLNERIKLEGIITRVET 830
Query: 757 NLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAES---IAFITPELEKEFLEMPTT 813
L E+ +K ++ + L++ R+ E + T ELE + T
Sbjct: 831 YLN-------------ENLRKRLDQVEQELNEL-RETEGGTVLTATTSELEAINKRVKDT 876
Query: 814 IEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDAL 873
+ E + ++I + + Q ++ +++ +++ D D KEL++ L
Sbjct: 877 MARSED-LDNSIDKTEAGIKELQKSMERWKNMEKEHMDAINH---DTKELEKMTNRQGML 932
Query: 874 ---KEKWLPTLRNLVAQINETFSRNFQEMAVAGEV-SLDEHESDFDKFGILIKVKFRQ-- 927
KE+ + +R L + E F + +Q +++ L++ ++ K+ + K Q
Sbjct: 933 LKKKEECMKKIRELGSLPQEAFEK-YQTLSLKQLFRKLEQCNTELKKYSHVNKKALDQFV 991
Query: 928 --SGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQL 985
S Q E L Q +R +I+ L+++ +L + + + + N ++FQ+L
Sbjct: 992 NFSEQKEKL-IKRQEELDRGYKSIMELMNVLELRK--YEAIQLTFKQVSK-NFSEVFQKL 1047
Query: 986 V 986
V
Sbjct: 1048 V 1048
Score = 72 (30.4 bits), Expect = 7.2e-06, Sum P(2) = 7.2e-06
Identities = 21/75 (28%), Positives = 38/75 (50%)
Query: 802 ELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKK 861
EL+K+ + + ELEA + +N+ + +I + I E + Q++ + T+Q K
Sbjct: 677 ELQKDVRKAEEELGELEAKLNENLRR--NI----ERINNEIDQLMNQMQQIETQQRKFKA 730
Query: 862 ELKRFLAEIDALKEK 876
L+E+ LKEK
Sbjct: 731 SRDSILSEMKMLKEK 745
Score = 60 (26.2 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 37/155 (23%), Positives = 62/155 (40%)
Query: 362 AYEPPHDKIEKLGSQILEL-----GVQANQKRLQKSEKEKILNQNKLTLR--QCSDRLKD 414
A + DK+E + Q+ EL ++ +++L +E+I + KL L+ D L
Sbjct: 259 AQQDARDKMEDIERQVRELKTKISAMKEEKEQLSAERQEQIKQRTKLELKAKDLQDELAG 318
Query: 415 MEDKNNKLLHALRNSGAENIFEAYCWLQQHRHELN----KEAYGPVLLEVNVSNRAHANY 470
++ +LL R E I E L + + N KE G L R Y
Sbjct: 319 NSEQRKRLLKE-RQKLLEKIEEKQKELAETEPKFNSVKEKEERGIARLAQATQERTDL-Y 376
Query: 471 LEDHVGHYIWKSFITQDAGDRDFLAKNLKPFDVPI 505
+ G F +++ D+ ++ K LK D I
Sbjct: 377 AKQGRG----SQFTSKEERDK-WIKKELKSLDQAI 406
Score = 52 (23.4 bits), Expect = 2.0e-12, Sum P(3) = 2.0e-12
Identities = 33/165 (20%), Positives = 75/165 (45%)
Query: 370 IEKLGSQILELGVQANQKRLQ----KSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHA 425
IE++ ++I +L Q Q Q K+ ++ IL++ K+ LK+ ++ K
Sbjct: 704 IERINNEIDQLMNQMQQIETQQRKFKASRDSILSEMKM--------LKEKRQQSEKTFMP 755
Query: 426 LRNSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLEDHVGHYIWKSFIT 485
+ S +++ + ++ R L E +L ++++ ++ + L D + +
Sbjct: 756 KQRS-LQSLEASLHAMESTRESLKAELGTDLLSQLSLEDQKRVDALNDEIRQ------LQ 808
Query: 486 QDAGDRDFLAKNLKPFDV--PILNYVSNESSRKEPFQISEEMRAL 528
Q+ +R L + +K + + Y+ NE+ RK Q+ +E+ L
Sbjct: 809 QE--NRQLLNERIKLEGIITRVETYL-NENLRKRLDQVEQELNEL 850
>MGI|MGI:1339795 [details] [associations]
symbol:Smc3 "structural maintenance of chromosomes 3"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000775 "chromosome, centromeric region"
evidence=IEA] [GO:0000785 "chromatin" evidence=ISO] [GO:0000800
"lateral element" evidence=IDA] [GO:0000922 "spindle pole"
evidence=ISO] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005604 "basement membrane"
evidence=ISO] [GO:0005634 "nucleus" evidence=IDA] [GO:0005694
"chromosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0006275 "regulation of DNA replication" evidence=ISO]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007062 "sister chromatid cohesion" evidence=ISO]
[GO:0007067 "mitosis" evidence=IEA] [GO:0007126 "meiosis"
evidence=ISO;IPI] [GO:0007165 "signal transduction" evidence=ISO]
[GO:0016363 "nuclear matrix" evidence=ISO] [GO:0019827 "stem cell
maintenance" evidence=IMP] [GO:0030893 "meiotic cohesin complex"
evidence=ISO;IDA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=ISO] [GO:0034991 "nuclear meiotic
cohesin complex" evidence=IDA] [GO:0036033 "mediator complex
binding" evidence=IDA] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0046982 "protein heterodimerization activity" evidence=ISO]
[GO:0051276 "chromosome organization" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] InterPro:IPR010935 Pfam:PF06470
SMART:SM00968 InterPro:IPR003395 MGI:MGI:1339795 Pfam:PF02463
GO:GO:0005524 GO:GO:0007126 GO:GO:0005737 GO:GO:0007165
GO:GO:0005654 GO:GO:0000775 GO:GO:0051301 GO:GO:0007067
GO:GO:0007052 GO:GO:0006275 GO:GO:0006281 GO:GO:0000785
GO:GO:0003682 Reactome:REACT_118161 Reactome:REACT_120463
Reactome:REACT_75800 GO:GO:0016363 GO:GO:0005604 GO:GO:0000922
GO:GO:0032876 GO:GO:0051276 GO:GO:0019827 GO:GO:0045502
GO:GO:0000800 eggNOG:COG1196 SUPFAM:SSF75553 GO:GO:0036033
GO:GO:0034991 PDB:2WD5 PDBsum:2WD5 HOGENOM:HOG000166512 KO:K06669
OMA:NKVLEHF CTD:9126 HOVERGEN:HBG039849 OrthoDB:EOG4B5P4C
ChiTaRS:SMC3 EMBL:AF141294 EMBL:AF047601 EMBL:Y15128 EMBL:AK005647
IPI:IPI00132122 RefSeq:NP_031816.2 UniGene:Mm.14910
ProteinModelPortal:Q9CW03 SMR:Q9CW03 DIP:DIP-57028N IntAct:Q9CW03
STRING:Q9CW03 PhosphoSite:Q9CW03 PaxDb:Q9CW03 PRIDE:Q9CW03
Ensembl:ENSMUST00000025930 GeneID:13006 KEGG:mmu:13006
GeneTree:ENSGT00580000081628 InParanoid:Q9CW03
EvolutionaryTrace:Q9CW03 NextBio:282832 Bgee:Q9CW03 CleanEx:MM_SMC3
Genevestigator:Q9CW03 GermOnline:ENSMUSG00000024974 Uniprot:Q9CW03
Length = 1217
Score = 132 (51.5 bits), Expect = 2.0e-12, Sum P(3) = 2.0e-12
Identities = 86/365 (23%), Positives = 151/365 (41%)
Query: 643 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRRE-MENHIN-LRKRK----LESIEKE- 695
+Q E R + +E KL+ + + RKR + +E +N LR+ + L + E
Sbjct: 807 LQQENRQLLNERIKLEGIITRVETYLNENLRKRLDQVEQELNELRETEGGTVLTATTSEL 866
Query: 696 DDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEK-HMASIEFDAKIREL 754
+ IN + + ++ DL+ K IK L + +W EK HM +I D K EL
Sbjct: 867 EAINKRVKDTMARSEDLDNSIDKTEAGIKELQKSME--RWKNMEKEHMDAINHDTK--EL 922
Query: 755 EFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDA--KRQAESIAFITPELEKEFLEMPT 812
E + + + L+ E+C K++ +A K Q S+ + +LE+ E+
Sbjct: 923 E-KMTNRQGMLLKKK---EECMKKIRELGSLPQEAFEKYQTLSLKQLFRKLEQCNTELKK 978
Query: 813 TIEELEAAIQD--NISQANSIFFLNQNILQE-YEHRQRQIEDLST-KQEADKKELKRFLA 868
+ A+ N S+ Q L Y+ + L K EA + K+
Sbjct: 979 YSHVNKKALDQFVNFSEQKEKLIKRQEELDRGYKSIMELMNVLELRKYEAIQLTFKQVSK 1038
Query: 869 EIDALKEKWLP----TLRNLVAQINETFSRNFQEMAVAGEVSLDEHES--DFDKF-GILI 921
+ +K +P TL + + S++ E + E S D+F G+ I
Sbjct: 1039 NFSEVFQKLVPGGKATLVMKKGDVEGSQSQDEGEGSGESERGSGSQSSVPSVDQFTGVGI 1098
Query: 922 KVKFRQSGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKM 981
+V F Q E+ SGG++S+ + + ++Q PF + DEI+Q +D RK
Sbjct: 1099 RVSFTGK-QGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFYLFDEIDQALDA-QHRKA 1156
Query: 982 FQQLV 986
++
Sbjct: 1157 VSDMI 1161
Score = 126 (49.4 bits), Expect = 2.0e-12, Sum P(3) = 2.0e-12
Identities = 79/386 (20%), Positives = 148/386 (38%)
Query: 23 IIEIELHNFMTF-DHLICKP-GSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI 80
I ++ + F ++ D I P S+ N+++G NGSGKS+ AI L + L R
Sbjct: 3 IKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHL-RPEQR 61
Query: 81 GAYVKRGEESGYIK--ISLRGDTKEEHLTI------MRKIDTRNKSEWFFNGKVVPKGEV 132
A + G I + + D + L I +R++ K ++F + K+V K +V
Sbjct: 62 LALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKNDV 121
Query: 133 LEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSK 192
+ + + +N + Q ++ + A + L+ + G V E S
Sbjct: 122 MNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTR---VYDERKEESISL 178
Query: 193 LKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAE 252
+K E KR + +N+L E+ +E ++ +K + M++ L + Y+ + E
Sbjct: 179 MKETEG--KR--EKINELLKYIEERLHTLEEEKEELAQYQKWDKMRRALEYTIYNQELNE 234
Query: 253 YIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCK-KLSSLINENSKRRMD 311
L + + K ++ + K K+S++ E + +
Sbjct: 235 TRAKLDELSAKRETSGEKSRQLRDAQQDARDKMEDIERQVRELKTKISAMKEEKEQLSAE 294
Query: 312 FLEKVDQGVQVQGKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPAY-EPPHDKI 370
E++ Q +++ K K +LK R Q A EP + +
Sbjct: 295 RQEQIKQRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELAETEPKFNSV 354
Query: 371 -EKLGSQILELGVQANQKRLQKSEKE 395
EK I L QA Q+R K+
Sbjct: 355 KEKEERGIARLA-QATQERTDLYAKQ 379
Score = 74 (31.1 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 70/361 (19%), Positives = 154/361 (42%)
Query: 643 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEK-----EDD 697
+ + + IE + K + R+ I++ +++ K KR++ E ++R L+S+E E
Sbjct: 714 LMNQMQQIETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMEST 773
Query: 698 INTALAKL-VDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEF 756
+ A+L D + L+++ K + L EI + + I+ + I +E
Sbjct: 774 RESLKAELGTDLLSQLSLEDQK---RVDALNDEIRQLQQENRQLLNERIKLEGIITRVET 830
Query: 757 NLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAES---IAFITPELEKEFLEMPTT 813
L E+ +K ++ + L++ R+ E + T ELE + T
Sbjct: 831 YLN-------------ENLRKRLDQVEQELNEL-RETEGGTVLTATTSELEAINKRVKDT 876
Query: 814 IEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDAL 873
+ E + ++I + + Q ++ +++ +++ D D KEL++ L
Sbjct: 877 MARSED-LDNSIDKTEAGIKELQKSMERWKNMEKEHMDAINH---DTKELEKMTNRQGML 932
Query: 874 ---KEKWLPTLRNLVAQINETFSRNFQEMAVAGEV-SLDEHESDFDKFGILIKVKFRQ-- 927
KE+ + +R L + E F + +Q +++ L++ ++ K+ + K Q
Sbjct: 933 LKKKEECMKKIRELGSLPQEAFEK-YQTLSLKQLFRKLEQCNTELKKYSHVNKKALDQFV 991
Query: 928 --SGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQL 985
S Q E L Q +R +I+ L+++ +L + + + + N ++FQ+L
Sbjct: 992 NFSEQKEKL-IKRQEELDRGYKSIMELMNVLELRK--YEAIQLTFKQVSK-NFSEVFQKL 1047
Query: 986 V 986
V
Sbjct: 1048 V 1048
Score = 72 (30.4 bits), Expect = 7.2e-06, Sum P(2) = 7.2e-06
Identities = 21/75 (28%), Positives = 38/75 (50%)
Query: 802 ELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKK 861
EL+K+ + + ELEA + +N+ + +I + I E + Q++ + T+Q K
Sbjct: 677 ELQKDVRKAEEELGELEAKLNENLRR--NI----ERINNEIDQLMNQMQQIETQQRKFKA 730
Query: 862 ELKRFLAEIDALKEK 876
L+E+ LKEK
Sbjct: 731 SRDSILSEMKMLKEK 745
Score = 60 (26.2 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 37/155 (23%), Positives = 62/155 (40%)
Query: 362 AYEPPHDKIEKLGSQILEL-----GVQANQKRLQKSEKEKILNQNKLTLR--QCSDRLKD 414
A + DK+E + Q+ EL ++ +++L +E+I + KL L+ D L
Sbjct: 259 AQQDARDKMEDIERQVRELKTKISAMKEEKEQLSAERQEQIKQRTKLELKAKDLQDELAG 318
Query: 415 MEDKNNKLLHALRNSGAENIFEAYCWLQQHRHELN----KEAYGPVLLEVNVSNRAHANY 470
++ +LL R E I E L + + N KE G L R Y
Sbjct: 319 NSEQRKRLLKE-RQKLLEKIEEKQKELAETEPKFNSVKEKEERGIARLAQATQERTDL-Y 376
Query: 471 LEDHVGHYIWKSFITQDAGDRDFLAKNLKPFDVPI 505
+ G F +++ D+ ++ K LK D I
Sbjct: 377 AKQGRG----SQFTSKEERDK-WIKKELKSLDQAI 406
Score = 52 (23.4 bits), Expect = 2.0e-12, Sum P(3) = 2.0e-12
Identities = 33/165 (20%), Positives = 75/165 (45%)
Query: 370 IEKLGSQILELGVQANQKRLQ----KSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHA 425
IE++ ++I +L Q Q Q K+ ++ IL++ K+ LK+ ++ K
Sbjct: 704 IERINNEIDQLMNQMQQIETQQRKFKASRDSILSEMKM--------LKEKRQQSEKTFMP 755
Query: 426 LRNSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLEDHVGHYIWKSFIT 485
+ S +++ + ++ R L E +L ++++ ++ + L D + +
Sbjct: 756 KQRS-LQSLEASLHAMESTRESLKAELGTDLLSQLSLEDQKRVDALNDEIRQ------LQ 808
Query: 486 QDAGDRDFLAKNLKPFDV--PILNYVSNESSRKEPFQISEEMRAL 528
Q+ +R L + +K + + Y+ NE+ RK Q+ +E+ L
Sbjct: 809 QE--NRQLLNERIKLEGIITRVETYL-NENLRKRLDQVEQELNEL 850
>UNIPROTKB|D4A1B9 [details] [associations]
symbol:Smc3 "Structural maintenance of chromosomes protein
3" species:10116 "Rattus norvegicus" [GO:0000785 "chromatin"
evidence=IEA] [GO:0000800 "lateral element" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0007052 "mitotic spindle
organization" evidence=IEA] [GO:0007126 "meiosis" evidence=IEA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0016363
"nuclear matrix" evidence=IEA] [GO:0019827 "stem cell maintenance"
evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] [GO:0034991 "nuclear meiotic
cohesin complex" evidence=IEA] [GO:0036033 "mediator complex
binding" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0051276 "chromosome organization" evidence=IEA]
InterPro:IPR010935 Pfam:PF06470 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 RGD:62006 GO:GO:0005524 GO:GO:0007126 GO:GO:0005737
GO:GO:0007165 GO:GO:0007052 GO:GO:0000785 GO:GO:0016363
GO:GO:0000922 GO:GO:0032876 GO:GO:0051276 GO:GO:0000800
SUPFAM:SSF75553 EMBL:CH473986 GO:GO:0030893 KO:K06669 CTD:9126
OrthoDB:EOG4B5P4C GeneTree:ENSGT00580000081628 UniGene:Rn.11074
IPI:IPI00780283 RefSeq:NP_113771.2 SMR:D4A1B9
Ensembl:ENSRNOT00000019560 GeneID:29486 KEGG:rno:29486
NextBio:609354 Uniprot:D4A1B9
Length = 1217
Score = 132 (51.5 bits), Expect = 2.0e-12, Sum P(3) = 2.0e-12
Identities = 86/365 (23%), Positives = 151/365 (41%)
Query: 643 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRRE-MENHIN-LRKRK----LESIEKE- 695
+Q E R + +E KL+ + + RKR + +E +N LR+ + L + E
Sbjct: 807 LQQENRQLLNERIKLEGIITRVETYLNENLRKRLDQVEQELNELRETEGGTVLTATTSEL 866
Query: 696 DDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEK-HMASIEFDAKIREL 754
+ IN + + ++ DL+ K IK L + +W EK HM +I D K EL
Sbjct: 867 EAINKRVKDTMARSEDLDNSIDKTEAGIKELQKSME--RWKNMEKEHMDAINHDTK--EL 922
Query: 755 EFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDA--KRQAESIAFITPELEKEFLEMPT 812
E + + + L+ E+C K++ +A K Q S+ + +LE+ E+
Sbjct: 923 E-KMTNRQGMLLKKK---EECMKKIRELGSLPQEAFEKYQTLSLKQLFRKLEQCNTELKK 978
Query: 813 TIEELEAAIQD--NISQANSIFFLNQNILQE-YEHRQRQIEDLST-KQEADKKELKRFLA 868
+ A+ N S+ Q L Y+ + L K EA + K+
Sbjct: 979 YSHVNKKALDQFVNFSEQKEKLIKRQEELDRGYKSIMELMNVLELRKYEAIQLTFKQVSK 1038
Query: 869 EIDALKEKWLP----TLRNLVAQINETFSRNFQEMAVAGEVSLDEHES--DFDKF-GILI 921
+ +K +P TL + + S++ E + E S D+F G+ I
Sbjct: 1039 NFSEVFQKLVPGGKATLVMKKGDVEGSQSQDEGEGSGESERGSGSQSSVPSVDQFTGVGI 1098
Query: 922 KVKFRQSGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKM 981
+V F Q E+ SGG++S+ + + ++Q PF + DEI+Q +D RK
Sbjct: 1099 RVSFTGK-QGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFYLFDEIDQALDA-QHRKA 1156
Query: 982 FQQLV 986
++
Sbjct: 1157 VSDMI 1161
Score = 126 (49.4 bits), Expect = 2.0e-12, Sum P(3) = 2.0e-12
Identities = 79/386 (20%), Positives = 148/386 (38%)
Query: 23 IIEIELHNFMTF-DHLICKP-GSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI 80
I ++ + F ++ D I P S+ N+++G NGSGKS+ AI L + L R
Sbjct: 3 IKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHL-RPEQR 61
Query: 81 GAYVKRGEESGYIK--ISLRGDTKEEHLTI------MRKIDTRNKSEWFFNGKVVPKGEV 132
A + G I + + D + L I +R++ K ++F + K+V K +V
Sbjct: 62 LALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKNDV 121
Query: 133 LEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSK 192
+ + + +N + Q ++ + A + L+ + G V E S
Sbjct: 122 MNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTR---VYDERKEESISL 178
Query: 193 LKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAE 252
+K E KR + +N+L E+ +E ++ +K + M++ L + Y+ + E
Sbjct: 179 MKETEG--KR--EKINELLKYIEERLHTLEEEKEELAQYQKWDKMRRALEYTIYNQELNE 234
Query: 253 YIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCK-KLSSLINENSKRRMD 311
L + + K ++ + K K+S++ E + +
Sbjct: 235 TRAKLDELSAKRETSGEKSRQLRDAQQDARDKMEDIERQVRELKTKISAMKEEKEQLSAE 294
Query: 312 FLEKVDQGVQVQGKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPAY-EPPHDKI 370
E++ Q +++ K K +LK R Q A EP + +
Sbjct: 295 RQEQIKQRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELAETEPKFNSV 354
Query: 371 -EKLGSQILELGVQANQKRLQKSEKE 395
EK I L QA Q+R K+
Sbjct: 355 KEKEERGIARLA-QATQERTDLYAKQ 379
Score = 74 (31.1 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 70/361 (19%), Positives = 154/361 (42%)
Query: 643 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEK-----EDD 697
+ + + IE + K + R+ I++ +++ K KR++ E ++R L+S+E E
Sbjct: 714 LMNQMQQIETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMEST 773
Query: 698 INTALAKL-VDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEF 756
+ A+L D + L+++ K + L EI + + I+ + I +E
Sbjct: 774 RESLKAELGTDLLSQLSLEDQK---RVDALNDEIRQLQQENRQLLNERIKLEGIITRVET 830
Query: 757 NLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAES---IAFITPELEKEFLEMPTT 813
L E+ +K ++ + L++ R+ E + T ELE + T
Sbjct: 831 YLN-------------ENLRKRLDQVEQELNEL-RETEGGTVLTATTSELEAINKRVKDT 876
Query: 814 IEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDAL 873
+ E + ++I + + Q ++ +++ +++ D D KEL++ L
Sbjct: 877 MARSED-LDNSIDKTEAGIKELQKSMERWKNMEKEHMDAINH---DTKELEKMTNRQGML 932
Query: 874 ---KEKWLPTLRNLVAQINETFSRNFQEMAVAGEV-SLDEHESDFDKFGILIKVKFRQ-- 927
KE+ + +R L + E F + +Q +++ L++ ++ K+ + K Q
Sbjct: 933 LKKKEECMKKIRELGSLPQEAFEK-YQTLSLKQLFRKLEQCNTELKKYSHVNKKALDQFV 991
Query: 928 --SGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQL 985
S Q E L Q +R +I+ L+++ +L + + + + N ++FQ+L
Sbjct: 992 NFSEQKEKL-IKRQEELDRGYKSIMELMNVLELRK--YEAIQLTFKQVSK-NFSEVFQKL 1047
Query: 986 V 986
V
Sbjct: 1048 V 1048
Score = 72 (30.4 bits), Expect = 7.2e-06, Sum P(2) = 7.2e-06
Identities = 21/75 (28%), Positives = 38/75 (50%)
Query: 802 ELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKK 861
EL+K+ + + ELEA + +N+ + +I + I E + Q++ + T+Q K
Sbjct: 677 ELQKDVRKAEEELGELEAKLNENLRR--NI----ERINNEIDQLMNQMQQIETQQRKFKA 730
Query: 862 ELKRFLAEIDALKEK 876
L+E+ LKEK
Sbjct: 731 SRDSILSEMKMLKEK 745
Score = 60 (26.2 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 37/155 (23%), Positives = 62/155 (40%)
Query: 362 AYEPPHDKIEKLGSQILEL-----GVQANQKRLQKSEKEKILNQNKLTLR--QCSDRLKD 414
A + DK+E + Q+ EL ++ +++L +E+I + KL L+ D L
Sbjct: 259 AQQDARDKMEDIERQVRELKTKISAMKEEKEQLSAERQEQIKQRTKLELKAKDLQDELAG 318
Query: 415 MEDKNNKLLHALRNSGAENIFEAYCWLQQHRHELN----KEAYGPVLLEVNVSNRAHANY 470
++ +LL R E I E L + + N KE G L R Y
Sbjct: 319 NSEQRKRLLKE-RQKLLEKIEEKQKELAETEPKFNSVKEKEERGIARLAQATQERTDL-Y 376
Query: 471 LEDHVGHYIWKSFITQDAGDRDFLAKNLKPFDVPI 505
+ G F +++ D+ ++ K LK D I
Sbjct: 377 AKQGRG----SQFTSKEERDK-WIKKELKSLDQAI 406
Score = 52 (23.4 bits), Expect = 2.0e-12, Sum P(3) = 2.0e-12
Identities = 33/165 (20%), Positives = 75/165 (45%)
Query: 370 IEKLGSQILELGVQANQKRLQ----KSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHA 425
IE++ ++I +L Q Q Q K+ ++ IL++ K+ LK+ ++ K
Sbjct: 704 IERINNEIDQLMNQMQQIETQQRKFKASRDSILSEMKM--------LKEKRQQSEKTFMP 755
Query: 426 LRNSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLEDHVGHYIWKSFIT 485
+ S +++ + ++ R L E +L ++++ ++ + L D + +
Sbjct: 756 KQRS-LQSLEASLHAMESTRESLKAELGTDLLSQLSLEDQKRVDALNDEIRQ------LQ 808
Query: 486 QDAGDRDFLAKNLKPFDV--PILNYVSNESSRKEPFQISEEMRAL 528
Q+ +R L + +K + + Y+ NE+ RK Q+ +E+ L
Sbjct: 809 QE--NRQLLNERIKLEGIITRVETYL-NENLRKRLDQVEQELNEL 850
>UNIPROTKB|O97594 [details] [associations]
symbol:SMC3 "Structural maintenance of chromosomes protein
3" species:9913 "Bos taurus" [GO:0030893 "meiotic cohesin complex"
evidence=ISS] [GO:0000785 "chromatin" evidence=ISS] [GO:0006275
"regulation of DNA replication" evidence=ISS] [GO:0000922 "spindle
pole" evidence=ISS] [GO:0007165 "signal transduction" evidence=ISS]
[GO:0016363 "nuclear matrix" evidence=ISS] [GO:0007052 "mitotic
spindle organization" evidence=ISS] [GO:0007126 "meiosis"
evidence=ISS] [GO:0045502 "dynein binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0000775 "chromosome,
centromeric region" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0051276 "chromosome organization" evidence=IEA]
InterPro:IPR010935 Pfam:PF06470 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0007126 GO:GO:0005737
GO:GO:0007165 GO:GO:0000775 GO:GO:0051301 GO:GO:0007067
GO:GO:0007052 GO:GO:0006275 GO:GO:0006281 GO:GO:0000785
GO:GO:0016363 GO:GO:0000922 GO:GO:0051276 GO:GO:0045502
eggNOG:COG1196 SUPFAM:SSF75553 GO:GO:0030893 HOGENOM:HOG000166512
KO:K06669 EMBL:AF072713 IPI:IPI00698576 RefSeq:NP_776720.1
UniGene:Bt.5290 ProteinModelPortal:O97594 STRING:O97594
PRIDE:O97594 GeneID:281729 KEGG:bta:281729 CTD:9126
HOVERGEN:HBG039849 InParanoid:O97594 OrthoDB:EOG4B5P4C
NextBio:20805649 Uniprot:O97594
Length = 1218
Score = 132 (51.5 bits), Expect = 2.0e-12, Sum P(3) = 2.0e-12
Identities = 86/366 (23%), Positives = 149/366 (40%)
Query: 643 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRRE-MENHIN-LRKRK----LESIEKE- 695
+Q E R + +E KL+ + + RKR + +E +N LR+ + L + E
Sbjct: 807 LQQENRQLLNERIKLEGIITRVETYLNENLRKRLDQVEQELNELRETEGGTVLTATTSEL 866
Query: 696 DDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEK-HMASIEFDAKIREL 754
+ IN + + ++ DL+ K IK L + +W EK HM +I D K EL
Sbjct: 867 EAINKRVKDTMARSEDLDNSIDKTEAGIKELQKSME--RWKNMEKEHMDAINHDTK--EL 922
Query: 755 EFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDA--KRQAESIAFITPELEKEFLEMPT 812
E + + + L+ E+C K++ +A K Q S+ + +LE+ E+
Sbjct: 923 E-KMTNRQGMLLKKK---EECMKKIRELGSLPQEAFEKYQTLSLKQLFRKLEQCNTELKK 978
Query: 813 TIEELEAAIQD--NISQANSIFFLNQNILQE-YEHRQRQIEDLST-KQEADKKELKRFLA 868
+ A+ N S+ Q L Y+ + L K EA + K+
Sbjct: 979 YSHVNKKALDQFVNFSEQKEKLIKRQEELDRGYKSIMELMNVLELRKYEAIQLTFKQVSK 1038
Query: 869 EIDALKEKWLPTLRNLVAQINETFSRN----FQEMAVA-GEVSLDEHES--DFDKF-GIL 920
+ +K +P + + R +E V GE S D+F G+
Sbjct: 1039 NFSEVFQKLVPGGKATLVMKKRRXERQSGLRMKEKGVVKGERGSGPQSSVPSVDQFTGVG 1098
Query: 921 IKVKFRQSGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERK 980
I+V F Q E+ SGG++S+ + + ++Q PF + DEI+Q +D RK
Sbjct: 1099 IRVSFTGK-QGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFYLFDEIDQALDA-QHRK 1156
Query: 981 MFQQLV 986
++
Sbjct: 1157 AVSDMI 1162
Score = 126 (49.4 bits), Expect = 2.0e-12, Sum P(3) = 2.0e-12
Identities = 79/386 (20%), Positives = 148/386 (38%)
Query: 23 IIEIELHNFMTF-DHLICKP-GSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI 80
I ++ + F ++ D I P S+ N+++G NGSGKS+ AI L + L R
Sbjct: 3 IKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHL-RPEQR 61
Query: 81 GAYVKRGEESGYIK--ISLRGDTKEEHLTI------MRKIDTRNKSEWFFNGKVVPKGEV 132
A + G I + + D + L I +R++ K ++F + K+V K +V
Sbjct: 62 LALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKNDV 121
Query: 133 LEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSK 192
+ + + +N + Q ++ + A + L+ + G V E S
Sbjct: 122 MNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTR---VYDERKEESISL 178
Query: 193 LKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAE 252
+K E KR + +N+L E+ +E ++ +K + M++ L + Y+ + E
Sbjct: 179 MKETEG--KR--EKINELLKYIEERLHTLEEEKEELAQYQKWDKMRRALEYTIYNQELNE 234
Query: 253 YIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCK-KLSSLINENSKRRMD 311
L + + K ++ + K K+S++ E + +
Sbjct: 235 TRAKLDELSAKRETSGEKSRQLRDAQQDARDKMEDIERQVRELKTKISAMKEEKEQLSAE 294
Query: 312 FLEKVDQGVQVQGKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPAY-EPPHDKI 370
E++ Q +++ K K +LK R Q A EP + +
Sbjct: 295 RQEQIKQRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELAETEPKFNSV 354
Query: 371 -EKLGSQILELGVQANQKRLQKSEKE 395
EK I L QA Q+R K+
Sbjct: 355 KEKEERGIARLA-QATQERTDLYAKQ 379
Score = 74 (31.1 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 70/361 (19%), Positives = 154/361 (42%)
Query: 643 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEK-----EDD 697
+ + + IE + K + R+ I++ +++ K KR++ E ++R L+S+E E
Sbjct: 714 LMNQMQQIETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMEST 773
Query: 698 INTALAKL-VDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEF 756
+ A+L D + L+++ K + L EI + + I+ + I +E
Sbjct: 774 RESLKAELGTDLLSQLSLEDQK---RVDALNDEIRQLQQENRQLLNERIKLEGIITRVET 830
Query: 757 NLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAES---IAFITPELEKEFLEMPTT 813
L E+ +K ++ + L++ R+ E + T ELE + T
Sbjct: 831 YLN-------------ENLRKRLDQVEQELNEL-RETEGGTVLTATTSELEAINKRVKDT 876
Query: 814 IEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDAL 873
+ E + ++I + + Q ++ +++ +++ D D KEL++ L
Sbjct: 877 MARSED-LDNSIDKTEAGIKELQKSMERWKNMEKEHMDAINH---DTKELEKMTNRQGML 932
Query: 874 ---KEKWLPTLRNLVAQINETFSRNFQEMAVAGEV-SLDEHESDFDKFGILIKVKFRQ-- 927
KE+ + +R L + E F + +Q +++ L++ ++ K+ + K Q
Sbjct: 933 LKKKEECMKKIRELGSLPQEAFEK-YQTLSLKQLFRKLEQCNTELKKYSHVNKKALDQFV 991
Query: 928 --SGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQL 985
S Q E L Q +R +I+ L+++ +L + + + + N ++FQ+L
Sbjct: 992 NFSEQKEKL-IKRQEELDRGYKSIMELMNVLELRK--YEAIQLTFKQVSK-NFSEVFQKL 1047
Query: 986 V 986
V
Sbjct: 1048 V 1048
Score = 72 (30.4 bits), Expect = 7.2e-06, Sum P(2) = 7.2e-06
Identities = 21/75 (28%), Positives = 38/75 (50%)
Query: 802 ELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKK 861
EL+K+ + + ELEA + +N+ + +I + I E + Q++ + T+Q K
Sbjct: 677 ELQKDVRKAEEELGELEAKLNENLRR--NI----ERINNEIDQLMNQMQQIETQQRKFKA 730
Query: 862 ELKRFLAEIDALKEK 876
L+E+ LKEK
Sbjct: 731 SRDSILSEMKMLKEK 745
Score = 60 (26.2 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 37/155 (23%), Positives = 62/155 (40%)
Query: 362 AYEPPHDKIEKLGSQILEL-----GVQANQKRLQKSEKEKILNQNKLTLR--QCSDRLKD 414
A + DK+E + Q+ EL ++ +++L +E+I + KL L+ D L
Sbjct: 259 AQQDARDKMEDIERQVRELKTKISAMKEEKEQLSAERQEQIKQRTKLELKAKDLQDELAG 318
Query: 415 MEDKNNKLLHALRNSGAENIFEAYCWLQQHRHELN----KEAYGPVLLEVNVSNRAHANY 470
++ +LL R E I E L + + N KE G L R Y
Sbjct: 319 NSEQRKRLLKE-RQKLLEKIEEKQKELAETEPKFNSVKEKEERGIARLAQATQERTDL-Y 376
Query: 471 LEDHVGHYIWKSFITQDAGDRDFLAKNLKPFDVPI 505
+ G F +++ D+ ++ K LK D I
Sbjct: 377 AKQGRG----SQFTSKEERDK-WIKKELKSLDQAI 406
Score = 52 (23.4 bits), Expect = 2.0e-12, Sum P(3) = 2.0e-12
Identities = 33/165 (20%), Positives = 75/165 (45%)
Query: 370 IEKLGSQILELGVQANQKRLQ----KSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHA 425
IE++ ++I +L Q Q Q K+ ++ IL++ K+ LK+ ++ K
Sbjct: 704 IERINNEIDQLMNQMQQIETQQRKFKASRDSILSEMKM--------LKEKRQQSEKTFMP 755
Query: 426 LRNSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLEDHVGHYIWKSFIT 485
+ S +++ + ++ R L E +L ++++ ++ + L D + +
Sbjct: 756 KQRS-LQSLEASLHAMESTRESLKAELGTDLLSQLSLEDQKRVDALNDEIRQ------LQ 808
Query: 486 QDAGDRDFLAKNLKPFDV--PILNYVSNESSRKEPFQISEEMRAL 528
Q+ +R L + +K + + Y+ NE+ RK Q+ +E+ L
Sbjct: 809 QE--NRQLLNERIKLEGIITRVETYL-NENLRKRLDQVEQELNEL 850
>WB|WBGene00010056 [details] [associations]
symbol:smc-6 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000794 "condensed nuclear chromosome"
evidence=IDA] [GO:0005654 "nucleoplasm" evidence=IDA]
InterPro:IPR027132 InterPro:IPR003395 Pfam:PF02463 GO:GO:0009792
EMBL:Z66513 PANTHER:PTHR19306:SF2 GeneTree:ENSGT00550000074816
EMBL:Z99771 RefSeq:NP_496476.2 ProteinModelPortal:G5EG17 SMR:G5EG17
EnsemblMetazoa:F54D5.14 GeneID:174776 KEGG:cel:CELE_F54D5.14
CTD:174776 WormBase:F54D5.14 OMA:IVNTHIN Uniprot:G5EG17
Length = 1149
Score = 141 (54.7 bits), Expect = 2.4e-12, Sum P(3) = 2.4e-12
Identities = 87/387 (22%), Positives = 162/387 (41%)
Query: 643 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHI-NLRKRKLESIEKEDDINTA 701
MQ + LIEDE + K +I + ++R+E E+ + ++K + K +
Sbjct: 771 MQKKIPLIEDEVKDILKNVADITADMAPVIQERKEAEHTLAEIQKETRDFASKSQKLQNE 830
Query: 702 LAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQH 761
L+K D L I+ K + + + + S + M +E D K +
Sbjct: 831 LSKYDDAGEILKIRLDKVKAD-EGVFFHTEAKLKSERDDAMEMVENDKKNHPMPPGETDP 889
Query: 762 EKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAI 821
L+ S + ++++E +K + A ++ IT E K+F + ++ L I
Sbjct: 890 PDLSSFPST--TEAQRKIEEMQKAVDRATVGCDTT--ITLECVKDFKDKLKRLKYLCRMI 945
Query: 822 QDNISQANSIFFLNQNILQEYEHRQRQIE-DLSTKQEADKKELKRFLAEIDALKEKWLPT 880
+D + + + L+ ++ Y ++ E + K + F+ ++ EK T
Sbjct: 946 EDVLIELKN---LHAARVKAYPSLKKFTELKVCNKFQELLAVRGHFIGGLEFDHEK--ET 1000
Query: 881 LRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGIL--IKVKFRQSGQLE--VLSA 936
L V E + + V +DEH D D + K ++SGQ + V
Sbjct: 1001 LNVNVQSSKEKDAMAGRRPEVLEVEEVDEHSYDDDSDDSTGPRRKKSKKSGQKKKRVRDL 1060
Query: 937 HHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQ--PNT 994
SGGERS T ++SL ++ PFR++DE + MD +N + + LV A++ P+
Sbjct: 1061 KGLSGGERSFVTAALVMSLWEVMEQPFRMMDEFDVFMDMMNRKLVMDLLVELATKKFPHN 1120
Query: 995 PQCFLLTPKLLPDLEYSEACSILNIMN 1021
Q TP+ + +L + + MN
Sbjct: 1121 -QFIFFTPQGIKELNMVDGLQVFE-MN 1145
Score = 128 (50.1 bits), Expect = 2.4e-12, Sum P(3) = 2.4e-12
Identities = 60/246 (24%), Positives = 106/246 (43%)
Query: 7 KRLKVSRGEDDYMPGNIIEIELHNFMTFDHLICKPGSRLN---LVIGPNGSGKSSLVCAI 63
K+ K+ GE + G + ++L NFM +L + N + GPNGSGKS+L AI
Sbjct: 31 KKAKLDTGERIAVSGRVASVKLTNFMCHANLQIDFKTAQNNCFYIGGPNGSGKSALFAAI 90
Query: 64 ALALGGDTQLLGRATSIGAYVKRGEESGYIKISLRGDTKEEH------LTIMRKIDTRNK 117
L LGG R ++ +Y+K G I I+L H ++I R I+ +
Sbjct: 91 NLGLGGRGSDNDRGNTVKSYIKDGTTQSKITITLTNAGLNAHPDFDDLISIERTINQASS 150
Query: 118 SEWFFNGKVVPKGEVLE-ITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGD 176
+ + KV +E I R V+ + R + ++ ++
Sbjct: 151 TYIMKSVKVTSSDNHVERIVSRKKADVDRIVS-----RFSIHLSNPAFWMSQDRSRSFLA 205
Query: 177 PQLPVQHCALVEKSSKLKTIECTVKRNGDTLN------QLKALNV-EQEKDVERVRQRAE 229
P L +S+ L+ I + R D L+ QLKA + ++K ++R++++ +
Sbjct: 206 NFKPANVYKLYLESTNLENIRLSYIRFADALDECFALIQLKAGEILNEQKKLKRMQEQRD 265
Query: 230 LLEKVE 235
L K++
Sbjct: 266 LQAKLD 271
Score = 110 (43.8 bits), Expect = 4.8e-10, Sum P(2) = 4.8e-10
Identities = 65/266 (24%), Positives = 127/266 (47%)
Query: 643 MQTEQRLIEDEAAKLQKEREEIINIV-QIEKRKRREMENHINLRKRKLESIEK-EDDINT 700
MQ EQR D AKL ++R + + ++ K R+ + I L +K E+ + +D+
Sbjct: 260 MQ-EQR---DLQAKLDQDRALVASFCWKLLFCKVRDYNDQIELTLKKQEAQKTLQDETKK 315
Query: 701 ALAKLVDQAA----DLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEF 756
AK ++AA + IQ+F+ +E+++ EI + K +EF+ KIRE E
Sbjct: 316 EYAK--NRAARTEVEKKIQEFRDEVEVQD--AEIAEAREDLDAKKRKVLEFEEKIRECEQ 371
Query: 757 NL--KQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTI 814
++ K EK ++ ++ + K EV + L + + + +T ++E ++ ++
Sbjct: 372 SIRKKTSEKKYMERTI--VNAKNEV----RILLEKQGNQDLTKRLT-KVENDYKDISQQR 424
Query: 815 EELEAAIQD-NISQANSIFFLNQNILQEYEHR-QRQIEDLSTKQEADKKELKRFLA-EID 871
E +E + + + + +E ++ QR I L K E D + ++R A + D
Sbjct: 425 ENMELGGESAKLREKLDTVITDYKRKEEEKYTIQRDINQLRRKIEQDMETMRRSRATKKD 484
Query: 872 ALKEKWLPTLRNLVAQINETFSRNFQ 897
A+ K+ + ++ +IN + SR FQ
Sbjct: 485 AIN-KFGSHMAEILMEINRSKSR-FQ 508
Score = 63 (27.2 bits), Expect = 1.0e-05, Sum P(3) = 1.0e-05
Identities = 39/199 (19%), Positives = 81/199 (40%)
Query: 129 KGEVLEITKRFNIQVNNLTQFLPQDRVCEF-AKLSPVKLLEETEKAVGDPQLPVQHCALV 187
K +V I RF+I ++N ++ QDR F A P + + ++ + + +
Sbjct: 174 KADVDRIVSRFSIHLSNPAFWMSQDRSRSFLANFKPANVYKLYLESTNLENIRLSYIRFA 233
Query: 188 EKSSKLKTIECTVKRNGDTLNQLKALN-VEQEKDVERVRQRAELLEKVESMKKKLPWLK- 245
+ + + +K G+ LN+ K L +++++D++ + L V S KL + K
Sbjct: 234 DALDECFAL-IQLKA-GEILNEQKKLKRMQEQRDLQAKLDQDRAL--VASFCWKLLFCKV 289
Query: 246 --YD------MKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKK 297
Y+ +KK E T E K I+ + E + D + +
Sbjct: 290 RDYNDQIELTLKKQEAQKTLQDETKKEYAKNRAART--EVEKKIQEFRDEVEVQDAEIAE 347
Query: 298 LSSLINENSKRRMDFLEKV 316
++ ++ ++F EK+
Sbjct: 348 AREDLDAKKRKVLEFEEKI 366
Score = 62 (26.9 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 22/106 (20%), Positives = 53/106 (50%)
Query: 644 QTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLES-IE--------K 694
Q E + E+AKL+++ + +I + ++ ++ ++ IN +RK+E +E K
Sbjct: 423 QRENMELGGESAKLREKLDTVITDYKRKEEEKYTIQRDINQLRRKIEQDMETMRRSRATK 482
Query: 695 EDDINTALAKLVDQAADLNIQQFKYAIEIKNLL---VEIVSCKWSY 737
+D IN + + + ++N + ++ K L + ++ KW++
Sbjct: 483 KDAINKFGSHMAEILMEINRSKSRFQTVPKGPLGKYITLIDPKWAF 528
Score = 57 (25.1 bits), Expect = 0.00086, Sum P(3) = 0.00086
Identities = 26/104 (25%), Positives = 54/104 (51%)
Query: 648 RLIED---EAAKLQ----KEREEIINIVQIEKRKRR----EMENHI-NLRKRKLESIEKE 695
RLIED EA +L+ ++++ + ++ E+ + + E + + NLR ++L+ +
Sbjct: 686 RLIEDTKSEAMRLETQDLRKQDHELKVIYNERDQTKAAIDEFDRKLSNLRSQELQKERQA 745
Query: 696 DDINTALAKLV--DQAADLN--IQQFKYAI-----EIKNLLVEI 730
D+ LA+ DQ +LN I++ + I E+K++L +
Sbjct: 746 KDLRAELAQTANEDQVENLNESIEEMQKKIPLIEDEVKDILKNV 789
Score = 56 (24.8 bits), Expect = 4.0e-05, Sum P(3) = 4.0e-05
Identities = 33/159 (20%), Positives = 68/159 (42%)
Query: 96 SLRGDTKEEHL-TIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQFLPQDR 154
+L+ +TK+E+ + + K + F + V E+ E + + + + +F + R
Sbjct: 308 TLQDETKKEYAKNRAARTEVEKKIQEFRDEVEVQDAEIAEAREDLDAKKRKVLEFEEKIR 367
Query: 155 VCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALN 214
CE + + E+ + + + V+ L+EK N D +L
Sbjct: 368 ECEQSIRKKTSEKKYMERTIVNAKNEVR--ILLEKQG-----------NQDLTKRLT--K 412
Query: 215 VEQE-KDVERVRQRAELLEKVESMKKKLPWLKYDMKKAE 252
VE + KD+ + R+ EL + +++KL + D K+ E
Sbjct: 413 VENDYKDISQQRENMELGGESAKLREKLDTVITDYKRKE 451
Score = 53 (23.7 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 27/114 (23%), Positives = 41/114 (35%)
Query: 209 QLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKA--EYIXXXXXXXXXXXX 266
Q K L E + Q L E +E M+KK+P ++ ++K
Sbjct: 744 QAKDLRAELAQTANE-DQVENLNESIEEMQKKIPLIEDEVKDILKNVADITADMAPVIQE 802
Query: 267 XXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENSKRRMDFLEKVDQGV 320
+TL E K + L + K E K R+D + K D+GV
Sbjct: 803 RKEAEHTLAEIQKETRDFASKSQKLQNELSKYDDA-GEILKIRLDKV-KADEGV 854
Score = 39 (18.8 bits), Expect = 2.4e-12, Sum P(3) = 2.4e-12
Identities = 10/34 (29%), Positives = 18/34 (52%)
Query: 275 HEFSKPIEGKKQEKAILDGDCKKLSSLINENSKR 308
HE + Q KA +D +KLS+L ++ ++
Sbjct: 708 HELKVIYNERDQTKAAIDEFDRKLSNLRSQELQK 741
Score = 38 (18.4 bits), Expect = 3.1e-12, Sum P(3) = 3.1e-12
Identities = 5/20 (25%), Positives = 15/20 (75%)
Query: 589 SISRYGGHVSASVEPVNQSR 608
+I+++G H++ + +N+S+
Sbjct: 485 AINKFGSHMAEILMEINRSK 504
Score = 38 (18.4 bits), Expect = 3.1e-12, Sum P(3) = 3.1e-12
Identities = 7/21 (33%), Positives = 13/21 (61%)
Query: 368 DKIEKLGSQILELGVQANQKR 388
D I K GS + E+ ++ N+ +
Sbjct: 484 DAINKFGSHMAEILMEINRSK 504
>UNIPROTKB|E1C614 [details] [associations]
symbol:E1C614 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000796 "condensin complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0007076 "mitotic
chromosome condensation" evidence=IEA] InterPro:IPR010935
InterPro:IPR027120 Pfam:PF06470 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005694 GO:GO:0051276
SUPFAM:SSF75553 GeneTree:ENSGT00550000074857 PANTHER:PTHR18937:SF9
EMBL:AADN02057751 EMBL:AADN02057752 EMBL:AADN02057753
EMBL:AADN02057754 EMBL:AADN02057755 IPI:IPI00819568
Ensembl:ENSGALT00000037605 OMA:FESINES ArrayExpress:E1C614
Uniprot:E1C614
Length = 1149
Score = 133 (51.9 bits), Expect = 3.3e-12, Sum P(3) = 3.3e-12
Identities = 69/344 (20%), Positives = 140/344 (40%)
Query: 650 IEDEAAKLQKEREEIINIVQIEKRKRREMENHI-NLRKRKLESI---EKEDDINTALAKL 705
I++ KL +++ + + K K++E+E + L + K E ++ + A+A L
Sbjct: 756 IKNAQQKLNSAKKKADDSSRKMKEKQQEVEALVLELEQLKQEQASYKQQSEAAQQAIASL 815
Query: 706 VDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNL---KQHE 762
+Q + L + K +KN E+ S +W +KH ++ +I++ F + HE
Sbjct: 816 KEQVSALEAEAVKTRESLKNAENELSSDQWEKKQKHSDVMDKLVQIQKNMFQITWKSVHE 875
Query: 763 KLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQ 822
C +++ K + E + E T ++L+ +
Sbjct: 876 SFPKILVPLMSSCV-QLDKLLKEYKWIASEKELFGQADTTYDFEANNPKETGQKLQKLLT 934
Query: 823 DNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLR 882
S+ N+L E E R DL K+ + + + LA I+ L K L
Sbjct: 935 KKEKLEKSLNMRAMNLLSEAEERYN---DLMKKKRIVENDKIKILATIEELDRKKNKALH 991
Query: 883 NLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQS-GQLEVLSAHHQSG 941
++N+ F F + + L + K IL ++FR G + + SG
Sbjct: 992 IAWEKVNKDFGSIFSMLLPGAKAMLVPSK----KQNILDGLEFRVGLGDIWKENLTELSG 1047
Query: 942 GERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQL 985
G+RS++ + ++++ P ++DE++ +D + + + Q L
Sbjct: 1048 GQRSLAALSLILAILLFKPAPIYILDEVDAALDLSHTQNIGQML 1091
Score = 123 (48.4 bits), Expect = 3.3e-12, Sum P(3) = 3.3e-12
Identities = 49/206 (23%), Positives = 92/206 (44%)
Query: 46 NLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSIGAYVKRGEESGYIK--ISLRGDTKE 103
N + G NGSGKS+++ +I LG RA+S+ V + ++G K +S+ D +
Sbjct: 28 NAITGLNGSGKSNILDSICFLLGISNLSQVRASSLQDLVYKNGQAGVNKATVSITFDNSD 87
Query: 104 -----------EHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQFLPQ 152
+ +TI R++ ++++ NG V ++ + VNN + Q
Sbjct: 88 KKNSPLGFENNDEITITRQVIVGGRNKYLINGMNASNNRVQDLFGSVGLNVNNPHFLIMQ 147
Query: 153 DRVCEFAKLSPVKLLEETEKAVGDPQLP-----VQHCALVEKSSKLKTIECTVKRN-GDT 206
++ + + P ++L E+A ++ H + +K SKL I + T
Sbjct: 148 GQITKVLNMKPTEILAMIEEAAAGTRMYECMKITAHKTIEKKESKLDEIRRIITEEISPT 207
Query: 207 LNQLK---ALNVEQEK---DVERVRQ 226
L +LK A +E +K +VE +R+
Sbjct: 208 LEKLKEARASYLEYQKMTREVENLRR 233
Score = 83 (34.3 bits), Expect = 3.5e-07, Sum P(4) = 3.5e-07
Identities = 49/216 (22%), Positives = 93/216 (43%)
Query: 676 REMENHINLRKRKLESIEKEDDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKW 735
R+ E+ + ++ +LE+ EKE LA L + A Q K E+K+ E++ K
Sbjct: 647 RDAEDELKIKTSQLEATEKE------LANLKNMAE--KYQHLKQQWEMKSEEAELLQTKI 698
Query: 736 SYAEKHMASIEFDA---KIRELEFNLKQHEKLALQASLHYEDCK-----------KEVEH 781
+ H + A I E E LK+ E+ +A Y+ + KE+++
Sbjct: 699 QQSAYHKQQEDLLALKKTIAECEETLKKTEESQRKAEEEYKALENKMKNAEAERGKEIKN 758
Query: 782 CRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQE 841
++ L+ AK++A+ + +++++ E+ + ELE Q+ S Q I
Sbjct: 759 AQQKLNSAKKKADDSS---RKMKEKQQEVEALVLELEQLKQEQASYKQQSEAAQQAIASL 815
Query: 842 YEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKW 877
E Q+ L + ++ LK AE + ++W
Sbjct: 816 KE----QVSALEAEAVKTRESLKN--AENELSSDQW 845
Score = 66 (28.3 bits), Expect = 5.6e-06, Sum P(3) = 5.6e-06
Identities = 19/69 (27%), Positives = 34/69 (49%)
Query: 188 EKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAE----LLEKVESMKKKLPW 243
E + I T ++ D + +LK EQE + + +Q + L E ES++ K P+
Sbjct: 411 EDQEAFEAIRKTKEKLQDEMKKLKYEEAEQEAHLAKKKQLSSEISSLRELCESIEAKHPY 470
Query: 244 LKYDMKKAE 252
L+++ K E
Sbjct: 471 LRFEYKNPE 479
Score = 51 (23.0 bits), Expect = 3.3e-12, Sum P(3) = 3.3e-12
Identities = 12/40 (30%), Positives = 27/40 (67%)
Query: 383 QANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKL 422
QAN+K++ +S E N+ K+ ++ + ++++ E KNN++
Sbjct: 258 QANKKKIFESMAE---NEKKV--KELAQQIEETEKKNNEV 292
Score = 46 (21.3 bits), Expect = 1.5e-11, Sum P(4) = 1.5e-11
Identities = 13/47 (27%), Positives = 25/47 (53%)
Query: 375 SQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNK 421
+++L+ +Q Q K ++E +L K T+ +C + LK E+ K
Sbjct: 691 AELLQTKIQ--QSAYHK-QQEDLLALKK-TIAECEETLKKTEESQRK 733
Score = 44 (20.5 bits), Expect = 3.5e-07, Sum P(4) = 3.5e-07
Identities = 14/45 (31%), Positives = 26/45 (57%)
Query: 651 EDEAA--KLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIE 693
ED+ A ++K +E++ + +++K K E E +L K+K S E
Sbjct: 411 EDQEAFEAIRKTKEKLQD--EMKKLKYEEAEQEAHLAKKKQLSSE 453
Score = 43 (20.2 bits), Expect = 1.5e-11, Sum P(4) = 1.5e-11
Identities = 13/45 (28%), Positives = 22/45 (48%)
Query: 209 QLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAEY 253
+LK E +K ++ E E + K+KL + +MKK +Y
Sbjct: 394 ELKTKQAEVKKMDGSYKEDQEAFEAIRKTKEKL---QDEMKKLKY 435
>TIGR_CMR|CHY_1443 [details] [associations]
symbol:CHY_1443 "chromosome segregation protein SMC"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0005524 "ATP binding" evidence=ISS] [GO:0007059 "chromosome
segregation" evidence=ISS] [GO:0030261 "chromosome condensation"
evidence=ISS] InterPro:IPR024704 HAMAP:MF_01894 InterPro:IPR010935
InterPro:IPR011890 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0005737
GO:GO:0005694 GO:GO:0003677 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0006260 GO:GO:0006281 GO:GO:0006310 GO:GO:0030261
GO:GO:0007062 eggNOG:COG1196 SUPFAM:SSF75553 HOGENOM:HOG000036392
KO:K03529 TIGRFAMs:TIGR02168 OMA:GDITKFI RefSeq:YP_360275.1
ProteinModelPortal:Q3AC59 STRING:Q3AC59 GeneID:3728135
KEGG:chy:CHY_1443 PATRIC:21276017
BioCyc:CHYD246194:GJCN-1442-MONOMER Uniprot:Q3AC59
Length = 1185
Score = 165 (63.1 bits), Expect = 3.5e-12, Sum P(3) = 3.5e-12
Identities = 94/373 (25%), Positives = 173/373 (46%)
Query: 643 MQTEQRLIEDEAAKLQKEREEI-INIVQIEKRKRREMENHINL-RKRKLESIEKEDDINT 700
++ E I D + Q +E+ + VQ+EK +EN NL ++ L+ E +
Sbjct: 799 LEKEISRINDLIYENQNYYQELTLQQVQLEKA----LENIFNLINEKSLQKKELFERQKV 854
Query: 701 ALAKLVD-QAADLNIQQFKYAIEIKNLLV-EIVSCKWSYAE--KHMASIEFDAKIRELEF 756
+ K ++ + LN+++ +E K +++S Y E K+ E K+ E++
Sbjct: 855 SAKKALEFKNKILNLKKDFLTLERKIAAHGDLLSVSKKYFETVKNKHE-ELKDKLSEMQT 913
Query: 757 NLKQHEKLALQASLHYEDCKK-EVEHCRKHLSDAKRQA----ESIAFITPELEKEFLEMP 811
L + +KL +Q H+ + + E E R L + R E + + E LE P
Sbjct: 914 TLTKTQKL-IQK--HFAEISRLETEQ-RNLLQEINRLKLLLNEKYDIVLGDEEVLKLE-P 968
Query: 812 TTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEI- 870
IEE E I++ +Q + +N ++ E + + +I L+ +Q D E K L ++
Sbjct: 969 VYIEERE--IEELYNQIQGLGPVNLFVIDEVKRLEERINFLN-QQRNDLNEAKEQLEKLL 1025
Query: 871 DALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKF--RQS 928
L E+ + +NE + F+E+ G +L++ + K GI I V+ ++
Sbjct: 1026 SQLTEEMEQRFNEFLKLLNEEYDLVFKELFGGGRAALEKVVGEDQKEGIEIIVELPGKKR 1085
Query: 929 GQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRA 988
L +LS GGER++++I L +L +L PF V+DEI+ +D N ++ F ++
Sbjct: 1086 QPLGLLS-----GGERALASIALLFALFNLKPSPFCVLDEIDAALDEANVQR-FAAYLKK 1139
Query: 989 ASQPNTPQCFLLT 1001
+ N Q L+T
Sbjct: 1140 IGERN--QVILIT 1150
Score = 122 (48.0 bits), Expect = 1.1e-07, Sum P(3) = 1.1e-07
Identities = 51/201 (25%), Positives = 98/201 (48%)
Query: 646 EQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLES----IEKE-DDINT 700
E RLIE + +L K E N++ +EK R + N+I K+KLE +EKE IN
Sbjct: 751 ESRLIELKG-QLDKNNREKKNLL-VEKENREQQINNIISLKKKLEEKIAFLEKEISRIND 808
Query: 701 ALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQ 760
+ + + +L +QQ + ++N+ +++ K S +K + + + + LEF K
Sbjct: 809 LIYENQNYYQELTLQQVQLEKALENIF-NLINEK-SLQKKELFERQKVSAKKALEFKNK- 865
Query: 761 HEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAA 820
L + ++++ LS +K+ E++ EL+ + EM TT+ + +
Sbjct: 866 ----ILNLKKDFLTLERKIAAHGDLLSVSKKYFETVKNKHEELKDKLSEMQTTLTKTQKL 921
Query: 821 IQDNISQANSIFFLNQNILQE 841
IQ + ++ + + +N+LQE
Sbjct: 922 IQKHFAEISRLETEQRNLLQE 942
Score = 104 (41.7 bits), Expect = 3.5e-12, Sum P(3) = 3.5e-12
Identities = 50/204 (24%), Positives = 90/204 (44%)
Query: 48 VIGPNGSGKSSLVCAIALALGGD-TQLLG--RATSIGAYVKRGEES-GYIKISLRGDTKE 103
++GPNGSGKS++ AI ALG T++L R + +G + G +++L D
Sbjct: 28 IVGPNGSGKSNVAEAIRWALGETKTKILRSERQQDVIFTGSQGRKPVGMAEVTLILDNSN 87
Query: 104 EH-------LTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQFLPQDRVC 156
+H + I R+ +SE++ N ++ E+ + + + Q +V
Sbjct: 88 KHFPLPYAEIAITRRFFRSGESEFYINKSPCRLKDIHELLVDTGLGKHGYA-IIGQGQVD 146
Query: 157 EFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVE 216
E SP + E+A G + ++ +E KL + + R D N+L
Sbjct: 147 EILFSSPEEKRSYLEEAAGINRFRMRE---LEAKKKLLETQNGITRLNDLTNELTNQLQA 203
Query: 217 QEKDVERVRQRAELLEKVESMKKK 240
+E+DV + + L EK+ + K K
Sbjct: 204 KEQDVIKAKTYLTLKEKL-TFKAK 226
Score = 84 (34.6 bits), Expect = 0.00074, Sum P(3) = 0.00074
Identities = 76/383 (19%), Positives = 156/383 (40%)
Query: 651 EDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAA 710
++E LQK+ +E++ +K E+E ++ +K E I+ I KL D A
Sbjct: 681 KNEIKLLQKQVDELL-------QKNNEVEEALSAFLKKQEDIDAT--IKLTGEKLSDIEA 731
Query: 711 DLNIQQFKYA-IEIKNLLVE--IVSCKWSYAE--KHMASIEFDAKIRELEFNLKQHEKLA 765
L K I+ K L+E ++ K + + ++ + + RE + N K
Sbjct: 732 QLTEADLKEQNIKDKRNLIESRLIELKGQLDKNNREKKNLLVEKENREQQINNIISLKKK 791
Query: 766 LQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEF-----LEMPTTIEELEAA 820
L+ + + +KE+ + + + + + +LEK L ++++ E
Sbjct: 792 LEEKIAF--LEKEISRINDLIYENQNYYQELTLQQVQLEKALENIFNLINEKSLQKKELF 849
Query: 821 IQDNISQANSIFFLNQ--NILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWL 878
+ +S ++ F N+ N+ +++ +R+I KK + + + LK+K L
Sbjct: 850 ERQKVSAKKALEFKNKILNLKKDFLTLERKIAAHGDLLSVSKKYFETVKNKHEELKDK-L 908
Query: 879 PTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFR-QSGQLEVLSAH 937
++ + + + ++F E++ E + ++ +L+ K+ G EVL
Sbjct: 909 SEMQTTLTKTQKLIQKHFAEISRL-ETEQRNLLQEINRLKLLLNEKYDIVLGDEEVLKLE 967
Query: 938 HQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTPQC 997
ER + LY +Q L V+DE+ + + ER F R Q
Sbjct: 968 PVYIEEREIEE-LYN-QIQGLGPVNLFVIDEVKR----LEERINFLNQQRNDLNEAKEQL 1021
Query: 998 FLLTPKLLPDLE--YSEACSILN 1018
L +L ++E ++E +LN
Sbjct: 1022 EKLLSQLTEEMEQRFNEFLKLLN 1044
Score = 58 (25.5 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 18/79 (22%), Positives = 40/79 (50%)
Query: 164 VKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVER 223
+KLL++ + V+ AL K + I+ T+K G+ L+ ++A E + +
Sbjct: 684 IKLLQKQVDELLQKNNEVEE-ALSAFLKKQEDIDATIKLTGEKLSDIEAQLTEADLKEQN 742
Query: 224 VRQRAELLE-KVESMKKKL 241
++ + L+E ++ +K +L
Sbjct: 743 IKDKRNLIESRLIELKGQL 761
Score = 48 (22.0 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 30/118 (25%), Positives = 58/118 (49%)
Query: 125 KVVPKGEVLEITKRFNIQVNNLTQFLP-QDRVCEFAKLSPVKLLEETEKAVGDPQLPVQH 183
K++ K +V E+ ++ N L+ FL Q+ + KL+ KL + E + + L Q+
Sbjct: 685 KLLQK-QVDELLQKNNEVEEALSAFLKKQEDIDATIKLTGEKL-SDIEAQLTEADLKEQN 742
Query: 184 CALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKL 241
+ +K + +++ +K D N+ K N+ EK+ R + + + S+KKKL
Sbjct: 743 --IKDKRNLIESRLIELKGQLDKNNREKK-NLLVEKE-----NREQQINNIISLKKKL 792
Score = 44 (20.5 bits), Expect = 3.7e-06, Sum P(3) = 3.7e-06
Identities = 28/123 (22%), Positives = 56/123 (45%)
Query: 138 RFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEE--TEKAVGDPQLPVQHCA--LVEKSSKL 193
R N N LT L Q + + K L+E T KA + +++ + E K+
Sbjct: 189 RLNDLTNELTNQL-QAKEQDVIKAKTYLTLKEKLTFKAKNYYGIKIKNLLDKVRENEEKI 247
Query: 194 KTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKV----ESMKKKLPWLKYDMK 249
+ +++N D +N+L+A + + ++ ++ L+K+ ES +KL +K +
Sbjct: 248 TLLHNLIEKNQDQVNRLEASFAKILSEEGKLGLFSDNLQKIVLNLESCLEKLDNVKKYQQ 307
Query: 250 KAE 252
+ E
Sbjct: 308 EEE 310
Score = 37 (18.1 bits), Expect = 3.5e-12, Sum P(3) = 3.5e-12
Identities = 10/43 (23%), Positives = 22/43 (51%)
Query: 375 SQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMED 417
+Q + + + N+ +L + + +++L +N S LK ED
Sbjct: 672 NQTVSVLQRKNEIKLLQKQVDELLQKNNEVEEALSAFLKKQED 714
>UNIPROTKB|F1NEA6 [details] [associations]
symbol:SMC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005694
"chromosome" evidence=IEA] [GO:0051276 "chromosome organization"
evidence=IEA] InterPro:IPR010935 Pfam:PF06470 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0005694
GO:GO:0051276 SUPFAM:SSF75553 GeneTree:ENSGT00580000081628
EMBL:AADN02030887 EMBL:AADN02030888 IPI:IPI00684346
Ensembl:ENSGALT00000033118 ArrayExpress:F1NEA6 Uniprot:F1NEA6
Length = 1217
Score = 134 (52.2 bits), Expect = 5.0e-12, Sum P(3) = 5.0e-12
Identities = 86/365 (23%), Positives = 151/365 (41%)
Query: 643 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRRE-MENHIN-LRKRK----LESIEKE- 695
+Q E R + +E KL+ + + RKR + +E +N LR+ + L + E
Sbjct: 807 LQQENRQLLNERIKLEGIITRVETYLNENLRKRLDQVEQELNELRETEGGTVLTATTSEL 866
Query: 696 DDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEK-HMASIEFDAKIREL 754
+ IN + + ++ DL+ K IK L + +W EK HM +I D K EL
Sbjct: 867 EAINKRVKDTLARSDDLDNSIDKTEAGIKELQKSME--RWKNMEKEHMDAINHDTK--EL 922
Query: 755 EFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDA--KRQAESIAFITPELEKEFLEMPT 812
E + + + L+ E+C K++ +A K Q S+ + +LE+ E+
Sbjct: 923 E-KMTNRQGMLLKKK---EECMKKIRELGSLPQEAFEKYQTLSLKQLFRKLEQCNTELKK 978
Query: 813 TIEELEAAIQD--NISQANSIFFLNQNILQE-YEHRQRQIEDLST-KQEADKKELKRFLA 868
+ A+ N S+ Q L Y+ + L K EA + K+
Sbjct: 979 YSHVNKKALDQFVNFSEQKEKLIKRQEELDRGYKSIMELMNVLELRKYEAIQLTFKQVSK 1038
Query: 869 EIDALKEKWLP----TLRNLVAQINETFSRNFQEMAVAGEVSLDEHES--DFDKF-GILI 921
+ +K +P TL + + S++ E + E S D+F G+ I
Sbjct: 1039 NFSEVFQKLVPGGKATLVMKKGDVEGSQSQDEGEGSTESERGSGSQSSVPSVDQFTGVGI 1098
Query: 922 KVKFRQSGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKM 981
+V F Q E+ SGG++S+ + + ++Q PF + DEI+Q +D RK
Sbjct: 1099 RVSFTGK-QGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFYLFDEIDQALDA-QHRKA 1156
Query: 982 FQQLV 986
++
Sbjct: 1157 VSDMI 1161
Score = 125 (49.1 bits), Expect = 5.0e-12, Sum P(3) = 5.0e-12
Identities = 78/381 (20%), Positives = 145/381 (38%)
Query: 28 LHNFMTF-DHLICKP-GSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSIGAYVK 85
+ F ++ D I P S+ N+++G NGSGKS+ AI L + L + A +
Sbjct: 8 IQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLPPLKRL-ALLH 66
Query: 86 RGEESGYIK--ISLRGDTKEEHLTI------MRKIDTRNKSEWFFNGKVVPKGEVLEITK 137
G I + + D + L I +R++ K ++F + K+V K +V+ + +
Sbjct: 67 EGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKNDVMNLLE 126
Query: 138 RFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIE 197
+N + Q ++ + A + L+ + G V E S +K E
Sbjct: 127 SAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTR---VYDERKEESISLMKETE 183
Query: 198 CTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAEYIXXX 257
KR + +N+L E+ +E ++ +K + M++ L + Y+ + E
Sbjct: 184 G--KR--EKINELLKYIEERLHTLEEEKEELAQYQKWDKMRRALEYTIYNQELNETRAKL 239
Query: 258 XXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCK-KLSSLINENSKRRMDFLEKV 316
L + + K +E + K K+S++ E + + E++
Sbjct: 240 DELSAKRETSGEKSRQLRDAQQDARDKMEEIERQVRELKTKISAMKEEKEQLSAERQEQI 299
Query: 317 DQGVQVQGKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPAY-EPPHDKI-EKLG 374
Q +++ K K +LK R Q A EP + + EK
Sbjct: 300 KQRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELAETEPKFNSVKEKEE 359
Query: 375 SQILELGVQANQKRLQKSEKE 395
I L QA Q+R K+
Sbjct: 360 RGIARLA-QATQERTDLYAKQ 379
Score = 78 (32.5 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 22/75 (29%), Positives = 39/75 (52%)
Query: 802 ELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKK 861
EL+K+ + + ELEA + +N+ + +I +NIL + Q++ + T+Q K
Sbjct: 677 ELQKDVRKAEEELGELEAKLNENLRR--NI----ENILLSIDQLMNQMQQIETQQRKFKA 730
Query: 862 ELKRFLAEIDALKEK 876
L+E+ LKEK
Sbjct: 731 SRDSILSEMKMLKEK 745
Score = 72 (30.4 bits), Expect = 9.1e-06, Sum P(2) = 9.1e-06
Identities = 69/361 (19%), Positives = 154/361 (42%)
Query: 643 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEK-----EDD 697
+ + + IE + K + R+ I++ +++ K KR++ E ++R L+S+E E
Sbjct: 714 LMNQMQQIETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMEST 773
Query: 698 INTALAKL-VDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEF 756
+ A+L D + L+++ K + L EI + + I+ + I +E
Sbjct: 774 RESLKAELGTDLLSQLSLEDQK---RVDALNDEIRQLQQENRQLLNERIKLEGIITRVET 830
Query: 757 NLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAES---IAFITPELEKEFLEMPTT 813
L E+ +K ++ + L++ R+ E + T ELE + T
Sbjct: 831 YLN-------------ENLRKRLDQVEQELNEL-RETEGGTVLTATTSELEAINKRVKDT 876
Query: 814 IEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDAL 873
+ + + ++I + + Q ++ +++ +++ D D KEL++ L
Sbjct: 877 LARSDD-LDNSIDKTEAGIKELQKSMERWKNMEKEHMDAINH---DTKELEKMTNRQGML 932
Query: 874 ---KEKWLPTLRNLVAQINETFSRNFQEMAVAGEV-SLDEHESDFDKFGILIKVKFRQ-- 927
KE+ + +R L + E F + +Q +++ L++ ++ K+ + K Q
Sbjct: 933 LKKKEECMKKIRELGSLPQEAFEK-YQTLSLKQLFRKLEQCNTELKKYSHVNKKALDQFV 991
Query: 928 --SGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQL 985
S Q E L Q +R +I+ L+++ +L + + + + N ++FQ+L
Sbjct: 992 NFSEQKEKL-IKRQEELDRGYKSIMELMNVLELRK--YEAIQLTFKQVSK-NFSEVFQKL 1047
Query: 986 V 986
V
Sbjct: 1048 V 1048
Score = 62 (26.9 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 37/155 (23%), Positives = 63/155 (40%)
Query: 362 AYEPPHDKIEKLGSQILEL-----GVQANQKRLQKSEKEKILNQNKLTLR--QCSDRLKD 414
A + DK+E++ Q+ EL ++ +++L +E+I + KL L+ D L
Sbjct: 259 AQQDARDKMEEIERQVRELKTKISAMKEEKEQLSAERQEQIKQRTKLELKAKDLQDELAG 318
Query: 415 MEDKNNKLLHALRNSGAENIFEAYCWLQQHRHELN----KEAYGPVLLEVNVSNRAHANY 470
++ +LL R E I E L + + N KE G L R Y
Sbjct: 319 NSEQRKRLLKE-RQKLLEKIEEKQKELAETEPKFNSVKEKEERGIARLAQATQERTDL-Y 376
Query: 471 LEDHVGHYIWKSFITQDAGDRDFLAKNLKPFDVPI 505
+ G F +++ D+ ++ K LK D I
Sbjct: 377 AKQGRG----SQFTSKEERDK-WIKKELKSLDQAI 406
Score = 47 (21.6 bits), Expect = 5.0e-12, Sum P(3) = 5.0e-12
Identities = 28/145 (19%), Positives = 66/145 (45%)
Query: 386 QKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAENIFEAYCWLQQHR 445
Q+R K+ ++ IL++ K+ LK+ ++ K + S +++ + ++ R
Sbjct: 724 QQRKFKASRDSILSEMKM--------LKEKRQQSEKTFMPKQRS-LQSLEASLHAMESTR 774
Query: 446 HELNKEAYGPVLLEVNVSNRAHANYLEDHVGHYIWKSFITQDAGDRDFLAKNLKPFDV-- 503
L E +L ++++ ++ + L D + + Q+ +R L + +K +
Sbjct: 775 ESLKAELGTDLLSQLSLEDQKRVDALNDEIRQ------LQQE--NRQLLNERIKLEGIIT 826
Query: 504 PILNYVSNESSRKEPFQISEEMRAL 528
+ Y+ NE+ RK Q+ +E+ L
Sbjct: 827 RVETYL-NENLRKRLDQVEQELNEL 850
>UNIPROTKB|E2QRT5 [details] [associations]
symbol:SMC1B "Structural maintenance of chromosomes
protein" species:9615 "Canis lupus familiaris" [GO:0005634
"nucleus" evidence=IEA] [GO:0030261 "chromosome condensation"
evidence=IEA] [GO:0007062 "sister chromatid cohesion" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0005694 "chromosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR024704
InterPro:IPR010935 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0005634
GO:GO:0005694 GO:GO:0006281 GO:GO:0006310 GO:GO:0030261
GO:GO:0007062 SUPFAM:SSF75553 KO:K06636
GeneTree:ENSGT00580000081569 CTD:27127 OMA:QLYHNEK
EMBL:AAEX03007228 EMBL:AAEX03007229 EMBL:AAEX03007230
RefSeq:XP_538328.2 Ensembl:ENSCAFT00000001296
Ensembl:ENSCAFT00000049571 GeneID:481207 KEGG:cfa:481207
NextBio:20856062 Uniprot:E2QRT5
Length = 1235
Score = 132 (51.5 bits), Expect = 6.8e-12, Sum P(3) = 6.8e-12
Identities = 69/300 (23%), Positives = 127/300 (42%)
Query: 21 GNIIEIELHNFMTF-DHLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATS 79
G + + + NF ++ H + P R +IGPNGSGKS+++ A++ +G T L R +
Sbjct: 2 GRLEVLLVENFKSWRGHQVIGPFRRFTCIIGPNGSGKSNVMDALSFVMGEKTANL-RVKN 60
Query: 80 I-----GAYVKRG-EESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVL 133
I GA++ R S +KI ++ EE T R I SE+ F+ V + +
Sbjct: 61 IQELIHGAHIGRPVSSSASVKIVYVEESGEEK-TFTRII-RGGCSEFHFDDNPVSRSAYI 118
Query: 134 EITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKL 193
++ I V + Q V + P + + E+ +L ++ EK KL
Sbjct: 119 AELEKIGIIVKARNCLVFQGTVESISMKKPKERTQFFEEISTSGELIGEY---EEKKRKL 175
Query: 194 KTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLE--KVESMKKKLPWLKYDMKKA 251
+ E + N + + A + + E + LLE K+ ++ +L L ++ KK
Sbjct: 176 QKAEEDAQFNFNKKKNVAAERKHAKLEKEEAERYQSLLEELKMNKIQLQLFQLYHNEKKI 235
Query: 252 EYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAIL-------DGDCKKLSSLINE 304
++ + HE ++ KK+E +L + + K L +L+N+
Sbjct: 236 HFLNTELEHVSRNLSVTKESLSRHE--NTVKAKKKEHGMLTRQLQQTEKELKSLEALLNQ 293
Score = 122 (48.0 bits), Expect = 6.8e-12, Sum P(3) = 6.8e-12
Identities = 81/391 (20%), Positives = 176/391 (45%)
Query: 644 QTEQRLIEDEAAK--LQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTA 701
Q ++RL + K +QK REEI ++ Q+E+ ++ N + ++++L+ I + N
Sbjct: 827 QLKKRLSKINTLKETIQKGREEIEDLKQVEE-DCLQIVNELMAKRQQLKDIFVTQNAN-- 883
Query: 702 LAKLVDQAADLNIQQFKYAI--EIKNLLVEIVSCKWSYAEKHMA--SIEFDAKIRELEFN 757
A+ V + ++F AI E+ E+V + S +K + ++ D K++++E
Sbjct: 884 -AEKVQAQIEEKRKKF-LAIDKEVGKWQKEVVIIQTSLEQKRLEKHNLLLDCKVQDIEII 941
Query: 758 LKQHEKLALQASLHYEDCKKEVEHCRKHLSD-AKRQAESIAFITPELEKEFLEMPTTIE- 815
L +L + E E E + + K +A I + + + + LE IE
Sbjct: 942 LLLG---SLDDIIEVE-LGTEAESTQATVDIYEKEEAIEIDYSSLRDDLKALESDKEIEA 997
Query: 816 ELEAAIQDNISQANSIFFL---NQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDA 872
L+ +Q SQ + + N L+ + + + ++ + EA KKE + E +
Sbjct: 998 HLKLLLQQVASQEDVLLKTAAPNLRALENLKTVRDKFQESTDAFEASKKEARMCRQEFEQ 1057
Query: 873 LKEK----WLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQS 928
+K++ + ++ I+E + + + ++ +S + E + + GI
Sbjct: 1058 VKKRRYDLFSQCFEHVSISIDEIYKKLCRNVSAQAFLSPENPEEPYLE-GISYNCV--AP 1114
Query: 929 GQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRA 988
G+ + + SGGE+ V+ + L ++ PF V+DE++ +D N K+ ++
Sbjct: 1115 GK-RFMPMDNLSGGEKCVAALALLFAVHSFRPAPFFVLDEVDAALDNTNIGKV-SSYIKE 1172
Query: 989 ASQPNTPQCFLLTPKLLPDLEYSEACSILNI 1019
+Q Q +++ L + YS+A +++ +
Sbjct: 1173 QTQEQF-QMIIIS---LKEEFYSKADALIGV 1199
Score = 72 (30.4 bits), Expect = 7.3e-07, Sum P(3) = 7.3e-07
Identities = 59/263 (22%), Positives = 111/263 (42%)
Query: 643 MQTEQRLIEDEAAKLQ---KEREEIINIVQIEKRKRREME--NHI-------NLRKRKLE 690
+Q+E IE + L KER++ I Q EK + E E H N+R+ + +
Sbjct: 737 LQSELLNIESQCTMLSEGIKERQQRIEEFQ-EKIDKVEDEIFQHFCEEIGVENIREFEKK 795
Query: 691 SIEKEDDINTALAKLVDQAADLNIQ------QFKYAIEIKNLLVEIVSCKWSYAEKHMAS 744
++++ +I+ + Q LN+Q Q K + N L E + K + +
Sbjct: 796 HVKQQQEIDQKRLEFEKQKTRLNVQLEYSRNQLKKRLSKINTLKETIQ-KGREEIEDLKQ 854
Query: 745 IEFDAK--IRELEFNLKQHEKLALQASLHYEDCKKEVEHCRKHL----SDAKRQAESIAF 798
+E D + EL +Q + + + + + E + ++E RK + + + +
Sbjct: 855 VEEDCLQIVNELMAKRQQLKDIFVTQNANAEKVQAQIEEKRKKFLAIDKEVGKWQKEVVI 914
Query: 799 ITPELEKEFLEMPTTIEELEAAIQDN--ISQANSIF-FLNQNILQEYEHRQRQIEDLSTK 855
I LE++ LE + L+ +QD I S+ + + E E Q + D+ K
Sbjct: 915 IQTSLEQKRLEKHNLL--LDCKVQDIEIILLLGSLDDIIEVELGTEAESTQATV-DIYEK 971
Query: 856 QEA---DKKELKRFLAEIDALKE 875
+EA D L+ L +++ KE
Sbjct: 972 EEAIEIDYSSLRDDLKALESDKE 994
Score = 70 (29.7 bits), Expect = 1.1e-06, Sum P(3) = 1.1e-06
Identities = 40/187 (21%), Positives = 87/187 (46%)
Query: 693 EKE-DDINTALAKLVDQAADLNIQQFKYAIEIKNL--LVEIVSCKWSYAEKHMASIEFDA 749
EKE ++ A+L+ + DL ++ + ++K + LV+ + Y++ + I
Sbjct: 668 EKEIKNLRDRRAQLIQELKDL-MKILRKEADLKQIQTLVQGTHTRLKYSQSELEMI---- 722
Query: 750 KIRELEFNLKQHEKLALQASLHYED-CKKEVEHCRKHLSDAKRQAESIAFITPELEKEFL 808
K ++L ++ +L + L+ E C E ++ + E I + E+ + F
Sbjct: 723 KKKQLAAFYREQSQLQSEL-LNIESQCTMLSEGIKERQQRIEEFQEKIDKVEDEIFQHFC 781
Query: 809 EMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLA 868
E +E + + ++ Q I +Q L E+E ++ + L+ + E + +LK+ L+
Sbjct: 782 E-EIGVENIREFEKKHVKQQQEI---DQKRL-EFEKQKTR---LNVQLEYSRNQLKKRLS 833
Query: 869 EIDALKE 875
+I+ LKE
Sbjct: 834 KINTLKE 840
Score = 67 (28.6 bits), Expect = 6.3e-05, Sum P(2) = 6.3e-05
Identities = 23/105 (21%), Positives = 48/105 (45%)
Query: 218 EKDVERVR-QRAELLEKVESMKKKLPWLKYDMKKAEYIXXXXXXXXXXXXXXXXX---NT 273
EK+++ +R +RA+L+++++ + K L + D+K+ + +
Sbjct: 668 EKEIKNLRDRRAQLIQELKDLMKILR-KEADLKQIQTLVQGTHTRLKYSQSELEMIKKKQ 726
Query: 274 LHEFSKPIEGKKQEKAILDGDCKKLSSLINENSKRRMDFLEKVDQ 318
L F + + E ++ C LS I E +R +F EK+D+
Sbjct: 727 LAAFYREQSQLQSELLNIESQCTMLSEGIKERQQRIEEFQEKIDK 771
Score = 66 (28.3 bits), Expect = 7.2e-06, Sum P(2) = 7.2e-06
Identities = 48/242 (19%), Positives = 103/242 (42%)
Query: 645 TEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAK 704
T++ L E K++E + Q+++ ++ L +++ + I+ +++ + L K
Sbjct: 252 TKESLSRHENTVKAKKKEHGMLTRQLQQTEKELKSLEALLNQKRPQYIKAKENTSHHLKK 311
Query: 705 LVDQAA----DLNIQQFKYAIEIKNLLVEIVSCK--WSYAEKHMASIEFDAKIRELEFNL 758
L D A D Q K +IK L E+V W EK + E K R++E
Sbjct: 312 L-DVAKKSIKDSEKQCSKQEDDIKALETELVDLDGAWRSFEKQVEE-EILHKGRDIELEA 369
Query: 759 KQHEKLALQASLHYEDCKKEVEHCRKHLS----DAKRQAESIAFITPELEKEFLEMPTTI 814
Q ++ L E +K+V + L + K E +AF E + E+ +
Sbjct: 370 SQLDRYK---GLK-EQVRKKVAIMTQQLEKLHWEQKADKERLAF---ERRRHG-EVQENL 421
Query: 815 EELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALK 874
++++ I+D+ + + + + + +++Q E L + E K + E++ ++
Sbjct: 422 KQIKEQIEDHKKRIEKLEEYTKTCMDCLKEKKQQEETLVGEIENTKSRMSEVNEELNLIR 481
Query: 875 EK 876
+
Sbjct: 482 SE 483
Score = 58 (25.5 bits), Expect = 1.8e-05, Sum P(3) = 1.8e-05
Identities = 61/314 (19%), Positives = 127/314 (40%)
Query: 683 NLRKRKLESIEKEDDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHM 742
NLR R+ + I++ D L K++ + ADL +Q + ++ + ++ + +K
Sbjct: 673 NLRDRRAQLIQELKD----LMKILRKEADL--KQIQTLVQGTHTRLKYSQSELEMIKKKQ 726
Query: 743 ASIEFDAKIRELEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPE 802
+ F + +L+ L E S ++ ++ +E ++ + K + E E
Sbjct: 727 LAA-FYREQSQLQSELLNIESQCTMLSEGIKERQQRIEEFQEKID--KVEDEIFQHFCEE 783
Query: 803 LEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQ-EYEHRQRQIEDLSTKQEADKK 861
+ E + E+ Q I Q F + L + E+ + Q++ +K K+
Sbjct: 784 IGVENIR---EFEKKHVKQQQEIDQKRLEFEKQKTRLNVQLEYSRNQLKKRLSKINTLKE 840
Query: 862 ELKRFLAEIDALK---EKWLPTLRNLVA---QINETF-SRNFQEMAVAGEV--------S 906
+++ EI+ LK E L + L+A Q+ + F ++N V ++ +
Sbjct: 841 TIQKGREEIEDLKQVEEDCLQIVNELMAKRQQLKDIFVTQNANAEKVQAQIEEKRKKFLA 900
Query: 907 LDEHESDFDKFGILIKVKFRQSGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVV 966
+D+ + K ++I+ Q +LE + + + IL L SL D+
Sbjct: 901 IDKEVGKWQKEVVIIQTSLEQK-RLEKHNLLLDCKVQ-DIEIILLLGSLDDIIEVELGTE 958
Query: 967 DEINQGMDPINERK 980
E Q I E++
Sbjct: 959 AESTQATVDIYEKE 972
Score = 56 (24.8 bits), Expect = 0.00067, Sum P(3) = 0.00067
Identities = 33/140 (23%), Positives = 58/140 (41%)
Query: 690 ESIEKEDDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSY-AEKHMASIEFD 748
E + K DI ++L D+ L +Q + + I +E W A+K + E
Sbjct: 357 EILHKGRDIELEASQL-DRYKGLK-EQVRKKVAIMTQQLE--KLHWEQKADKERLAFE-R 411
Query: 749 AKIRELEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFL 808
+ E++ NLKQ ++ E ++ + C L + K+Q E++ E+E
Sbjct: 412 RRHGEVQENLKQIKEQIEDHKKRIEKLEEYTKTCMDCLKEKKQQEETLV---GEIENTKS 468
Query: 809 EMPTTIEELEAAIQDNISQA 828
M EEL I+ + A
Sbjct: 469 RMSEVNEELNL-IRSELQNA 487
Score = 51 (23.0 bits), Expect = 6.8e-12, Sum P(3) = 6.8e-12
Identities = 19/71 (26%), Positives = 36/71 (50%)
Query: 363 YEPPHDKIEKLGSQILELG-VQANQKRLQKS---EKEKILNQNKLTLRQCSDRLKDMEDK 418
+E DK E+L + G VQ N K++++ K++I + T + C D LK+ + +
Sbjct: 398 WEQKADK-ERLAFERRRHGEVQENLKQIKEQIEDHKKRIEKLEEYT-KTCMDCLKEKKQQ 455
Query: 419 NNKLLHALRNS 429
L+ + N+
Sbjct: 456 EETLVGEIENT 466
Score = 46 (21.3 bits), Expect = 1.5e-05, Sum P(4) = 1.5e-05
Identities = 12/41 (29%), Positives = 25/41 (60%)
Query: 653 EAAKLQKEREEIINIVQIEKRKRR--EMENHINLRKRKLES 691
+ K +K++EE + + +IE K R E+ +NL + +L++
Sbjct: 447 DCLKEKKQQEETL-VGEIENTKSRMSEVNEELNLIRSELQN 486
Score = 37 (18.1 bits), Expect = 1.8e-10, Sum P(3) = 1.8e-10
Identities = 15/67 (22%), Positives = 30/67 (44%)
Query: 359 TVPAYEPPHD----KIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKD 414
TV A + H ++++ ++ L NQKR Q + ++ + + L +KD
Sbjct: 262 TVKAKKKEHGMLTRQLQQTEKELKSLEALLNQKRPQYIKAKENTSHHLKKLDVAKKSIKD 321
Query: 415 MEDKNNK 421
E + +K
Sbjct: 322 SEKQCSK 328
>SGD|S000004375 [details] [associations]
symbol:SMC6 "Component of the SMC5-SMC6 complex" species:4932
"Saccharomyces cerevisiae" [GO:0005634 "nucleus" evidence=IEA;IDA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005694 "chromosome" evidence=IEA]
[GO:0003684 "damaged DNA binding" evidence=IDA] [GO:0071139
"resolution of recombination intermediates" evidence=IMP]
[GO:0035861 "site of double-strand break" evidence=IDA] [GO:0000724
"double-strand break repair via homologous recombination"
evidence=IEA;IMP] [GO:0006281 "DNA repair" evidence=IEA;IDA;IMP]
[GO:0030915 "Smc5-Smc6 complex" evidence=IEA;IDA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=IEA] InterPro:IPR027132 SGD:S000004375 GO:GO:0005739
GO:GO:0005524 GO:GO:0005634 GO:GO:0003684 EMBL:BK006945
GO:GO:0000724 EMBL:U19104 EMBL:X05143 GO:GO:0035861 eggNOG:COG1196
GO:GO:0030915 GO:GO:0034500 GO:GO:0071139 PANTHER:PTHR19306:SF2
GeneTree:ENSGT00550000074816 OrthoDB:EOG486CMM EMBL:X80930
PIR:S51470 RefSeq:NP_013487.1 ProteinModelPortal:Q12749 SMR:Q12749
DIP:DIP-6624N IntAct:Q12749 MINT:MINT-675848 STRING:Q12749
PaxDb:Q12749 EnsemblFungi:YLR383W GeneID:851099 KEGG:sce:YLR383W
CYGD:YLR383w HOGENOM:HOG000141857 OMA:CANEANY NextBio:967785
Genevestigator:Q12749 GermOnline:YLR383W Uniprot:Q12749
Length = 1114
Score = 150 (57.9 bits), Expect = 1.0e-11, Sum P(3) = 1.0e-11
Identities = 59/237 (24%), Positives = 108/237 (45%)
Query: 21 GNIIEIELHNFMTFDHLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI 80
G I ++ L NFM +H + GSRLN ++G NGSGKS+++ AI + LG R +S+
Sbjct: 80 GYIKKVILRNFMCHEHFELELGSRLNFIVGNNGSGKSAILTAITIGLGAKASETNRGSSL 139
Query: 81 GAYVKRGEESGYIKISLRGD---TKEEHL----TIMRKIDTRNKSEWFF----NGKVVP- 128
++ G S I + L ++ + I+ +I R+ F NGK +
Sbjct: 140 KDLIREGCYSAKIILHLDNSKYGAYQQGIFGNEIIVERIIKRDGPASFSLRSENGKEISN 199
Query: 129 -KGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALV 187
K ++ + F++ V+N FL QD F S + ++ + L L+
Sbjct: 200 KKKDIQTVVDYFSVPVSNPMCFLSQDAARSFLTASTSQ--DKYSHFMKGTLLQEITENLL 257
Query: 188 EKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWL 244
S+ + + + + + L LKA + +K + + Q ++L E+ ++ K W+
Sbjct: 258 YASAIHDSAQENMALHLENLKSLKAEYEDAKKLLRELNQTSDLNERKMLLQAKSLWI 314
Score = 108 (43.1 bits), Expect = 1.0e-11, Sum P(3) = 1.0e-11
Identities = 79/378 (20%), Positives = 167/378 (44%)
Query: 651 EDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTAL--AKLVDQ 708
E++ ++++ +EI ++ K + R+ + K + + +N+ + K +Q
Sbjct: 720 EEKLSEVRSRLKEIDGRLKSTKNEMRKTNFRMTELKMNVGKVVDTGILNSKINERKNQEQ 779
Query: 709 A-ADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIREL--EFNLKQHE-KL 764
A A + + ++I+ + E K Y +A +E ++++L + N +Q + +
Sbjct: 780 AIASYEAAKEELGLKIEQIAQEAQPIKEQYDSTKLALVEAQDELQQLKEDINSRQSKIQK 839
Query: 765 ALQASLHYEDCKKE-VEHCRK---HLSDAK----RQAESI-AFITPELEKEFLEMPTTIE 815
+++YED KK +E+ +K +++ K RQ ++ AF + E E +++P T E
Sbjct: 840 YKDDTIYYEDKKKVYLENIKKIEVNVAALKEGIQRQIQNACAFCSKE-RIENVDLPDTQE 898
Query: 816 ELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKE 875
E++ + D +S+ + Q + Q ++ L K KE ++ EID
Sbjct: 899 EIKREL-DKVSR------MIQKAEKSLGLSQEEVIALFEKCRNKYKEGQKKYMEIDEA-- 949
Query: 876 KWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHES-DFDKF-GILIKVKFRQSGQLEV 933
L L N + ++ + +N E + +D S KF G L +K +S ++ +
Sbjct: 950 --LNRLHNSLKARDQNY-KN-AEKGTCFDADMDFRASLKVRKFSGNLSFIKDTKSLEIYI 1005
Query: 934 LSAHHQ--------SGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQL 985
L+ + + SGGE+S S + L++ +DE + MD +N + +
Sbjct: 1006 LTTNDEKARNVDTLSGGEKSFSQMALLLATWKPMRSRIIALDEFDVFMDQVNRKIGTTLI 1065
Query: 986 VRAASQPNTPQCFLLTPK 1003
V+ Q ++TP+
Sbjct: 1066 VKKLKDIARTQTIIITPQ 1083
Score = 76 (31.8 bits), Expect = 1.7e-08, Sum P(3) = 1.7e-08
Identities = 53/239 (22%), Positives = 106/239 (44%)
Query: 649 LIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQ 708
LIE E +LQ R+ + + + +E++ + K ++ K + T L V +
Sbjct: 704 LIEQETKELQNIRDRYEEKLSEVRSRLKEIDGRLKSTKNEMR---KTNFRMTELKMNVGK 760
Query: 709 AADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHE--KLAL 766
D I K E KN I S + A K ++ + +E + +Q++ KLAL
Sbjct: 761 VVDTGILNSKIN-ERKNQEQAIASYE---AAKEELGLKIEQIAQEAQPIKEQYDSTKLAL 816
Query: 767 -QASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNI 825
+A + K+++ + + K + ++I + + +K +LE IE AA+++ I
Sbjct: 817 VEAQDELQQLKEDINSRQSKIQ--KYKDDTIYY--EDKKKVYLENIKKIEVNVAALKEGI 872
Query: 826 SQA--NSIFFLNQNILQEY------EHRQRQIEDLSTKQEADKKELKRFLAEIDALKEK 876
+ N+ F ++ ++ E +R+++ +S + +K L E+ AL EK
Sbjct: 873 QRQIQNACAFCSKERIENVDLPDTQEEIKRELDKVSRMIQKAEKSLGLSQEEVIALFEK 931
Score = 72 (30.4 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 50/260 (19%), Positives = 123/260 (47%)
Query: 672 KRKRREMENHINLRKRK--LESIEKEDDI--NTALAK-LVDQAADLNIQQFKYAIEIKNL 726
K+ RE+ +L +RK L++ D+ NT K L ++ + + + + +I+N
Sbjct: 288 KKLLRELNQTSDLNERKMLLQAKSLWIDVAHNTDACKNLENEISGIQQKVDEVTEKIRNR 347
Query: 727 LVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHE---KLALQASLHYEDCKKEVEHCR 783
+I +++ ++ + DAK+ + +H+ +L +E K +
Sbjct: 348 QEKIE--RYT-SDGTTIEAQIDAKVIYVNEKDSEHQNARELLRDVKSRFEKEKSNQAEAQ 404
Query: 784 KHLSDAKRQAES----IAFITPELEKEFL----EMPTTIEELEAAIQDNISQANSIFFLN 835
++ +++ ++ IA + EL KE +M +E+LE A + + + N+ ++
Sbjct: 405 SNIDQGRKKVDALNKTIAHLEEELTKEMGGDKDQMRQELEQLEKA-NEKLREVNNSLVVS 463
Query: 836 QNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLVAQINETFSRN 895
LQ+ ++ +R D+ ++E++ + + R +++ K + L+N +A+ N+TF N
Sbjct: 464 ---LQDVKNEER---DIQHERESELRTISR------SIQNKKVE-LQN-IAKGNDTFLMN 509
Query: 896 FQEMAVAGEVSLDEHESDFD 915
F ++++ +++F+
Sbjct: 510 FDRNMDRLLRTIEQRKNEFE 529
Score = 47 (21.6 bits), Expect = 7.8e-06, Sum P(4) = 7.8e-06
Identities = 10/33 (30%), Positives = 20/33 (60%)
Query: 647 QRLIEDEAAKLQKEREEIINIVQIEKRKRREME 679
QR I++ A KER E +++ ++ +RE++
Sbjct: 873 QRQIQNACAFCSKERIENVDLPDTQEEIKRELD 905
Score = 45 (20.9 bits), Expect = 7.8e-06, Sum P(4) = 7.8e-06
Identities = 13/48 (27%), Positives = 20/48 (41%)
Query: 499 KPFDVPILNYVSNESSRKEPFQISEEMRALGISARLDQVFDAPHAVKE 546
K D ILN NE +E S E + +++Q+ +KE
Sbjct: 760 KVVDTGILNSKINERKNQEQAIASYEAAKEELGLKIEQIAQEAQPIKE 807
Score = 44 (20.5 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 12/44 (27%), Positives = 23/44 (52%)
Query: 379 ELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDM-EDKNNK 421
ELG++ Q + ++ + KL L + D L+ + ED N++
Sbjct: 790 ELGLKIEQIAQEAQPIKEQYDSTKLALVEAQDELQQLKEDINSR 833
Score = 43 (20.2 bits), Expect = 1.0e-11, Sum P(3) = 1.0e-11
Identities = 19/87 (21%), Positives = 33/87 (37%)
Query: 368 DKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALR 427
+KIE+ S + Q + K + +EK+ + LR R + E N +
Sbjct: 349 EKIERYTSDGTTIEAQIDAKVIYVNEKDSEHQNARELLRDVKSRF-EKEKSNQAEAQSNI 407
Query: 428 NSGAENIFEAYCWLQQHRHELNKEAYG 454
+ G + + + EL KE G
Sbjct: 408 DQGRKKVDALNKTIAHLEEELTKEMGG 434
Score = 39 (18.8 bits), Expect = 1.9e-05, Sum P(4) = 1.9e-05
Identities = 20/94 (21%), Positives = 40/94 (42%)
Query: 395 EKILNQNKLTLR--QCSDR----LKDMEDKNNKLLHALRNSGAENIFEAYCWLQQ----- 443
+ + Q+K+ L+ SD LKD+ ++ K L +R+ E + E L++
Sbjct: 678 DTVTYQDKIRLKVNSSSDNGTQYLKDLIEQETKELQNIRDRYEEKLSEVRSRLKEIDGRL 737
Query: 444 --HRHELNKEAYGPVLLEVNVSNRAHANYLEDHV 475
++E+ K + L++NV L +
Sbjct: 738 KSTKNEMRKTNFRMTELKMNVGKVVDTGILNSKI 771
Score = 39 (18.8 bits), Expect = 3.4e-05, Sum P(3) = 3.4e-05
Identities = 13/64 (20%), Positives = 28/64 (43%)
Query: 358 QTVPAYEPPHD----KIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLK 413
Q + +YE + KIE++ + + Q + +L E + L Q K + +++
Sbjct: 779 QAIASYEAAKEELGLKIEQIAQEAQPIKEQYDSTKLALVEAQDELQQLKEDINSRQSKIQ 838
Query: 414 DMED 417
+D
Sbjct: 839 KYKD 842
>UNIPROTKB|F1NDN4 [details] [associations]
symbol:SMC4 "Structural maintenance of chromosomes protein"
species:9031 "Gallus gallus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000796 "condensin complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0007076 "mitotic chromosome
condensation" evidence=IEA] [GO:0010032 "meiotic chromosome
condensation" evidence=IEA] [GO:0045132 "meiotic chromosome
segregation" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0051383 "kinetochore organization"
evidence=IEA] InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0006281
GO:GO:0006310 GO:GO:0007076 GO:GO:0000796 GO:GO:0007062
GeneTree:ENSGT00580000081617 SUPFAM:SSF75553 EMBL:AADN02021066
IPI:IPI00684483 Ensembl:ENSGALT00000032997 ArrayExpress:F1NDN4
Uniprot:F1NDN4
Length = 1274
Score = 138 (53.6 bits), Expect = 1.1e-11, Sum P(4) = 1.1e-11
Identities = 76/345 (22%), Positives = 153/345 (44%)
Query: 651 EDEAAKLQKEREEIINIV---QIE----KRKRREMENHINLRKRKLESIEKE-DDINTAL 702
+D+ K+ +E +E + + Q+ R ++ E+ + ++++ EKE D+ L
Sbjct: 874 QDKVDKINQEIDECTSAITKAQVAIKTAHRNLKKSEDSVLRTEKEIGDNEKEIKDLTEEL 933
Query: 703 AKLVDQAAD-LN-IQQFKYAI-----EIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELE 755
L D+A + LN +Q + A+ E +NLL E+ + + E ++ KI +++
Sbjct: 934 TTLEDKATEVLNDCRQAEEALPAVQEEHRNLLQEMRAIQDDEHELRKEALNIKFKIEQID 993
Query: 756 FNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIE 815
++ H Q+ + Y +KE+ H + K E + ++ E E E ++ P I
Sbjct: 994 SHISTH-----QSKIKY--WQKEISKLSLHPIEDK-PPEELPVLSQE-ELEAIKDPDIIT 1044
Query: 816 ELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEAD----KKELKRFLAEID 871
A ++ + N + EY R+ E+L K+ A+ E RF +
Sbjct: 1045 NQIALLEAQCHEMKP----NLGAIAEY----RRKEELYLKRVAELDDITNERDRFRQAFE 1096
Query: 872 ALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKF--GILIKVKFRQSG 929
L+++ L I N+Q + + G+ L+ +S D F GI+ V+ +
Sbjct: 1097 DLRKQRLNEFMAGFNVITNKLKENYQMLTLGGDAELELVDS-LDPFSEGIMFSVRPPKKS 1155
Query: 930 QLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMD 974
++ + SGGE+++S++ + +L P +DEI+ +D
Sbjct: 1156 WKKIFNL---SGGEKTLSSLALVFALHHYKPTPLYFMDEIDAALD 1197
Score = 106 (42.4 bits), Expect = 1.1e-11, Sum P(4) = 1.1e-11
Identities = 70/305 (22%), Positives = 124/305 (40%)
Query: 44 RLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSIGAYVKRGEESGYIK--------- 94
R + +IGPNGSGKS+++ A+ G Q + R+ + + EE I+
Sbjct: 78 RFSCIIGPNGSGKSNVIDAMLFVFGYRAQKI-RSKKLSVLIHNSEEHTDIQSCSVEVHFQ 136
Query: 95 --ISLRGDTKE----EHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQ 148
I GD E + + R N S + NGK +V + + I +++
Sbjct: 137 KIIDKEGDDYEVIPNSNFCVSRTAYRDNSSVYHINGKKSTFKDVGILLRSHGIDLDHNRF 196
Query: 149 FLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKL-KTIECTVKRNGDTL 207
+ Q V + A + P E E + + + L L + +E ++ G+ L
Sbjct: 197 LILQGEVEQIAMMKPKGQTEHDEGMLEYLEDLIGSARLRAPIQTLCRRVETLNEQRGEKL 256
Query: 208 NQLKALNVEQEKD-VERVRQRA-ELLEKVESM-KKKLPWLKYDMKKAEYIXXXXXXXXXX 264
N++K VE+EKD +E + +A E L M K+K +Y + +
Sbjct: 257 NRVKM--VEKEKDALEGDKNKAIEFLSLENKMFKEKNHICQYYIYDLQ--KRINDLETQK 312
Query: 265 XXXXXXXNTLHEFSKPI--EGKKQEKAILDGDCKKLSSLINENSKRRMDFLEKVDQGVQV 322
++E S + E K + KA+ D + KK+ + + + F + Q V+V
Sbjct: 313 ENIQKETKDINEKSSKLADEMKSKSKALKDLE-KKIDKITVLIEENKNKFTQLDLQDVKV 371
Query: 323 QGKYK 327
+ K K
Sbjct: 372 REKLK 376
Score = 91 (37.1 bits), Expect = 6.4e-07, Sum P(4) = 6.4e-07
Identities = 50/230 (21%), Positives = 99/230 (43%)
Query: 659 KEREEIINIVQIEKRKRREMENHINLRKRKLESI-EKEDDINTALAKLVDQAADLNIQQF 717
KE E + +K K++E+E +N K+ E + E+ + + + +L + D N ++
Sbjct: 811 KELEANVTAAAPDKNKQKELEKVLNSYKKDYERVSEQAGKMESEVKRLHNLIIDFNNRKL 870
Query: 718 KYAIE-IKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYEDCK 776
K + + + EI C + + +A I+ NLK+ E L+ D +
Sbjct: 871 KTQQDKVDKINQEIDECTSAITKAQVA-------IKTAHRNLKKSEDSVLRTEKEIGDNE 923
Query: 777 KEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQ 836
KE++ + L+ + +A + + E+ +P EE +Q+ + + L +
Sbjct: 924 KEIKDLTEELTTLEDKATEVLNDCRQAEEA---LPAVQEEHRNLLQEMRAIQDDEHELRK 980
Query: 837 NILQEYEHRQRQIED-LSTKQEADK---KELKRF-LAEIDALKEKWLPTL 881
L + + QI+ +ST Q K KE+ + L I+ + LP L
Sbjct: 981 EALN-IKFKIEQIDSHISTHQSKIKYWQKEISKLSLHPIEDKPPEELPVL 1029
Score = 85 (35.0 bits), Expect = 2.4e-06, Sum P(4) = 2.4e-06
Identities = 51/226 (22%), Positives = 89/226 (39%)
Query: 777 KEVEHCRKHLS-DAKR--QAESIAFITPE----LEKEFLEMPTTIEELEAAIQD----NI 825
+EV L D++R Q E F E L+K EM T+E+ A+IQ I
Sbjct: 745 EEVNRLESELQRDSQRAVQCEEEKFQLEEDITKLQKNVREMRNTLEKYTASIQSFSEQEI 804
Query: 826 SQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLV 885
+ L N+ + +Q ++L + KK+ +R ++E E + L NL+
Sbjct: 805 RLKGQVKELEANVTAAAPDKNKQ-KELEKVLNSYKKDYER-VSEQAGKMESEVKRLHNLI 862
Query: 886 AQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLE--VLSAHHQSG-G 942
N + Q+ +DE S K + IK R + E VL + G
Sbjct: 863 IDFNNRKLKTQQDKVDKINQEIDECTSAITKAQVAIKTAHRNLKKSEDSVLRTEKEIGDN 922
Query: 943 ERSVSTILY-LVSLQDLTNCPFRVVDEINQGMDPINE--RKMFQQL 985
E+ + + L +L+D + + + + E R + Q++
Sbjct: 923 EKEIKDLTEELTTLEDKATEVLNDCRQAEEALPAVQEEHRNLLQEM 968
Score = 81 (33.6 bits), Expect = 5.9e-06, Sum P(4) = 5.9e-06
Identities = 25/141 (17%), Positives = 63/141 (44%)
Query: 750 KIRELEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLE 809
++ LE L++ + A+Q ++++ +K++ + + E ++ +
Sbjct: 746 EVNRLESELQRDSQRAVQCEEEKFQLEEDITKLQKNVREMRNTLEKYTASIQSFSEQEIR 805
Query: 810 MPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAE 869
+ ++ELEA + N L + +L Y+ ++ + + K E++ K L + +
Sbjct: 806 LKGQVKELEANVTAAAPDKNKQKEL-EKVLNSYKKDYERVSEQAGKMESEVKRLHNLIID 864
Query: 870 IDALKEKWLPTLRNLVAQINE 890
+ K L T ++ V +IN+
Sbjct: 865 FNNRK---LKTQQDKVDKINQ 882
Score = 71 (30.1 bits), Expect = 9.6e-07, Sum P(3) = 9.6e-07
Identities = 21/79 (26%), Positives = 41/79 (51%)
Query: 166 LLEETEKAVGDPQLPVQHCALVEK----SSKLKTIECTVKRNGDTLNQLKALNVEQEKDV 221
L+EE + QL +Q + EK SK K +E ++++ + + +LK + EK++
Sbjct: 353 LIEENKNKF--TQLDLQDVKVREKLKHAKSKAKKLEKQLQKDKEKVEELKNVPSSSEKNI 410
Query: 222 ERVRQRAELLEKVESMKKK 240
+ ELLEK + +++
Sbjct: 411 SDATSKKELLEKAKDKEEE 429
Score = 66 (28.3 bits), Expect = 0.00023, Sum P(3) = 0.00023
Identities = 49/197 (24%), Positives = 93/197 (47%)
Query: 646 EQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKL 705
E R I+D+ +L+KE +NI K K ++++HI+ + K++ +KE +L +
Sbjct: 967 EMRAIQDDEHELRKEA---LNI----KFKIEQIDSHISTHQSKIKYWQKEIS-KLSLHPI 1018
Query: 706 VDQAAD-LNI--QQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHE 762
D+ + L + Q+ AI+ +++ ++ A+ H A I E ++ E
Sbjct: 1019 EDKPPEELPVLSQEELEAIKDPDIITNQIALL--EAQCHEMKPNLGA-IAEY----RRKE 1071
Query: 763 KLALQASLHYEDCKKEVEHCRKHLSDAKRQA--ESIA-F--ITPELEKEFLEMPTTIEEL 817
+L L+ +D E + R+ D ++Q E +A F IT +L KE +M T +
Sbjct: 1072 ELYLKRVAELDDITNERDRFRQAFEDLRKQRLNEFMAGFNVITNKL-KENYQMLTLGGDA 1130
Query: 818 EAAIQDNISQ-ANSIFF 833
E + D++ + I F
Sbjct: 1131 ELELVDSLDPFSEGIMF 1147
Score = 65 (27.9 bits), Expect = 0.00029, Sum P(3) = 0.00029
Identities = 47/236 (19%), Positives = 100/236 (42%)
Query: 647 QRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHI-NLRKRKLESIEKEDDINTALAKL 705
QR ++ E K Q E E+I + + + R +E + +++ + I + + A +
Sbjct: 759 QRAVQCEEEKFQLE-EDITKLQKNVREMRNTLEKYTASIQSFSEQEIRLKGQVKELEANV 817
Query: 706 VDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAK-IREL--EFN---LK 759
A D N Q+ E++ +L + + +E + K + L +FN LK
Sbjct: 818 TAAAPDKNKQK-----ELEKVLNSYKK-DYERVSEQAGKMESEVKRLHNLIIDFNNRKLK 871
Query: 760 QHEKLALQASLHYEDCKKEVEHCRKHLSDA----KRQAESIAFITPEL---EKEFLEMP- 811
+ + + ++C + + + A K+ +S+ E+ EKE ++
Sbjct: 872 TQQDKVDKINQEIDECTSAITKAQVAIKTAHRNLKKSEDSVLRTEKEIGDNEKEIKDLTE 931
Query: 812 --TTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKR 865
TT+E+ + ++ QA +QE EHR ++++ Q+ D+ EL++
Sbjct: 932 ELTTLEDKATEVLNDCRQAEEAL----PAVQE-EHRNL-LQEMRAIQD-DEHELRK 980
Score = 62 (26.9 bits), Expect = 7.5e-06, Sum P(3) = 7.5e-06
Identities = 19/82 (23%), Positives = 41/82 (50%)
Query: 165 KLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERV 224
K + E + D ++ + AL + K+ I ++ N + QL +V+ + ++
Sbjct: 320 KDINEKSSKLAD-EMKSKSKALKDLEKKIDKITVLIEENKNKFTQLDLQDVKVREKLKHA 378
Query: 225 RQRAELLEK-VESMKKKLPWLK 245
+ +A+ LEK ++ K+K+ LK
Sbjct: 379 KSKAKKLEKQLQKDKEKVEELK 400
Score = 61 (26.5 bits), Expect = 4.6e-05, Sum P(3) = 4.6e-05
Identities = 31/158 (19%), Positives = 69/158 (43%)
Query: 85 KRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITK-RFNIQV 143
K E+ + SL+ +T+E I ++ + + K F V +++ + +I +
Sbjct: 426 KEEEKLKQVMSSLQEETRE----IQKEKEGKEKELMEFCKTVNDARSKMDVAQAELDIYL 481
Query: 144 NNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDP--QLPVQHCALVEKSSKLKTIECTVK 201
+ Q + A ++ + L++ + A+ D +LP L EK +KL+ ++
Sbjct: 482 TRYNTAVSQLDEAKEALMTTSETLKQRKAAIKDIDIKLPTAEQELKEKENKLEKLKKEEL 541
Query: 202 RNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKK 239
D + L+ E + + + R R ++LE + K+
Sbjct: 542 NAQDLVRNLRQKVEEAKSSLAQHRSRGKVLEALLEQKR 579
Score = 59 (25.8 bits), Expect = 1.1e-11, Sum P(4) = 1.1e-11
Identities = 19/69 (27%), Positives = 32/69 (46%)
Query: 386 QKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAENIFEAYCWLQQHR 445
+K+LQK +KEK+ + K + D K +LL ++ E + + LQ+
Sbjct: 386 EKQLQK-DKEKV-EELKNVPSSSEKNISDATSKK-ELLEKAKDKEEEKLKQVMSSLQEET 442
Query: 446 HELNKEAYG 454
E+ KE G
Sbjct: 443 REIQKEKEG 451
Score = 47 (21.6 bits), Expect = 0.00023, Sum P(3) = 0.00023
Identities = 12/43 (27%), Positives = 24/43 (55%)
Query: 382 VQANQKRLQKSEKEKILNQNKLT--LRQCSDRLKDMEDKNNKL 422
++ ++ +QK K+ +KL ++ S LKD+E K +K+
Sbjct: 308 LETQKENIQKETKDINEKSSKLADEMKSKSKALKDLEKKIDKI 350
Score = 45 (20.9 bits), Expect = 1.1e-11, Sum P(4) = 1.1e-11
Identities = 12/34 (35%), Positives = 21/34 (61%)
Query: 646 EQRLIEDEAAKLQKEREEIINIVQIEKRKRREME 679
EQ L E E KL+K ++E +N + + R+++E
Sbjct: 523 EQELKEKEN-KLEKLKKEELNAQDLVRNLRQKVE 555
Score = 38 (18.4 bits), Expect = 1.5e-09, Sum P(3) = 1.5e-09
Identities = 12/57 (21%), Positives = 28/57 (49%)
Query: 378 LELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAENI 434
LE +Q + +R + E+EK + +T Q +++M + K ++++ + I
Sbjct: 750 LESELQRDSQRAVQCEEEKFQLEEDITKLQ--KNVREMRNTLEKYTASIQSFSEQEI 804
>UNIPROTKB|E1C612 [details] [associations]
symbol:E1C612 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000796 "condensin complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0007076 "mitotic
chromosome condensation" evidence=IEA] InterPro:IPR010935
InterPro:IPR027120 Pfam:PF06470 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005694 GO:GO:0051276
SUPFAM:SSF75553 GeneTree:ENSGT00550000074857 PANTHER:PTHR18937:SF9
EMBL:AADN02057751 EMBL:AADN02057752 EMBL:AADN02057753
EMBL:AADN02057754 EMBL:AADN02057755 IPI:IPI00819262
Ensembl:ENSGALT00000037609 ArrayExpress:E1C612 Uniprot:E1C612
Length = 1173
Score = 131 (51.2 bits), Expect = 1.2e-11, Sum P(3) = 1.2e-11
Identities = 73/350 (20%), Positives = 147/350 (42%)
Query: 650 IEDEAAKLQKEREEIINIVQIEKRKRREMENHI-NLRKRKLESI---EKEDDINTALAKL 705
I++ KL +++ + + K K++E+E + L + K E ++ + A+A L
Sbjct: 772 IKNAQQKLNSAKKKADDSSRKMKEKQQEVEALVLELEQLKQEQASYKQQSEAAQQAIASL 831
Query: 706 VDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEK------HMASIE-FDAKIRELEFNL 758
+Q + L + K +KN E+ S K AE+ A IE + + EL +
Sbjct: 832 KEQVSALEAEAVKTRESLKNAENELSSEKGLMAERTKDIKAKSAKIEKYREQNNELNYFK 891
Query: 759 K--QHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEE 816
+ Q EK + + ++ K +++ K + E + E T ++
Sbjct: 892 EGDQWEKKQKHSDVMDKNLKNKLDKLLKEYKWIASEKELFGQADTTYDFEANNPKETGQK 951
Query: 817 LEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEK 876
L+ + S+ N+L E E +R+ DL K+ + + + LA I+ L K
Sbjct: 952 LQKLLTKKEKLEKSLNMRAMNLLSEAE--ERKYNDLMKKKRIVENDKIKILATIEELDRK 1009
Query: 877 WLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQS-GQLEVLS 935
L ++N+ F F + + L + K IL ++FR G + +
Sbjct: 1010 KNKALHIAWEKVNKDFGSIFSMLLPGAKAMLVPSK----KQNILDGLEFRVGLGDIWKEN 1065
Query: 936 AHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQL 985
SGG+RS++ + ++++ P ++DE++ +D + + + Q L
Sbjct: 1066 LTELSGGQRSLAALSLILAILLFKPAPIYILDEVDAALDLSHTQNIGQML 1115
Score = 118 (46.6 bits), Expect = 1.2e-11, Sum P(3) = 1.2e-11
Identities = 52/226 (23%), Positives = 104/226 (46%)
Query: 46 NLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSIGAYVKRGEESGYIK--ISLRGDTKE 103
N + G NGSGKS+++ +I LG RA+S+ V + ++G K +S+ D +
Sbjct: 28 NAITGLNGSGKSNILDSICFLLGISNLSQVRASSLQDLVYKNGQAGVNKATVSITFDNSD 87
Query: 104 -----------EHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQFL-- 150
+ +TI R++ ++++ NG V ++ + VNN FL
Sbjct: 88 KKNSPLGFENNDEITITRQVIVGGRNKYLINGMNASNNRVQDLFGSVGLNVNN-PHFLIM 146
Query: 151 PQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQL 210
Q ++ + + P ++L E+A G + C K + KTIE + L+++
Sbjct: 147 QQGQITKVLNMKPTEILAMIEEAAGTR---MYECM---KITAHKTIE----KKESKLDEI 196
Query: 211 KALNVEQ-EKDVERVRQ-RAELLEKVESMKKKLPWLKYDMKKAEYI 254
+ + E+ +E++++ RA LE + M +++ L+ +Y+
Sbjct: 197 RRIITEEISPTLEKLKEARASYLE-YQKMTREVENLRRIYVAFQYV 241
Score = 81 (33.6 bits), Expect = 1.2e-06, Sum P(4) = 1.2e-06
Identities = 51/217 (23%), Positives = 93/217 (42%)
Query: 676 REMENHINLRKRKLESIEKEDDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKW 735
R+ E+ + ++ +LE+ EKE LA L + A Q K E+K+ E++ K
Sbjct: 663 RDAEDELKIKTSQLEATEKE------LANLKNMAE--KYQHLKQQWEMKSEEAELLQTKI 714
Query: 736 SYAEKHMASIEFDA---KIRELEFNLKQHEKLALQASLHYEDCK-----------KEVEH 781
+ H + A I E E LK+ E+ +A Y+ + KE+++
Sbjct: 715 QQSAYHKQQEDLLALKKTIAECEETLKKTEESQRKAEEEYKALENKMKNAEAERGKEIKN 774
Query: 782 CRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQE 841
++ L+ AK++A+ + +++++ E+ + ELE Q+ S Q I
Sbjct: 775 AQQKLNSAKKKADDSS---RKMKEKQQEVEALVLELEQLKQEQASYKQQSEAAQQAIASL 831
Query: 842 YEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWL 878
E Q+ L + ++ LK AE + EK L
Sbjct: 832 KE----QVSALEAEAVKTRESLKN--AENELSSEKGL 862
Score = 66 (28.3 bits), Expect = 9.6e-06, Sum P(3) = 9.6e-06
Identities = 19/69 (27%), Positives = 34/69 (49%)
Query: 188 EKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAE----LLEKVESMKKKLPW 243
E + I T ++ D + +LK EQE + + +Q + L E ES++ K P+
Sbjct: 427 EDQEAFEAIRKTKEKLQDEMKKLKYEEAEQEAHLAKKKQLSSEISSLRELCESIEAKHPY 486
Query: 244 LKYDMKKAE 252
L+++ K E
Sbjct: 487 LRFEYKNPE 495
Score = 53 (23.7 bits), Expect = 1.2e-11, Sum P(3) = 1.2e-11
Identities = 12/41 (29%), Positives = 28/41 (68%)
Query: 383 QANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLL 423
QAN+K++ +S E N+ K+ ++ + ++++ E KNN+++
Sbjct: 258 QANKKKIFESMAE---NEKKV--KELAQQIEETEKKNNEVI 293
Score = 52 (23.4 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 37/155 (23%), Positives = 67/155 (43%)
Query: 105 HLT-IMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLT---QFLPQ--DRVCEF 158
H+T I+ K+ T +E ++ K LE T++ + N+ Q L Q + E
Sbjct: 651 HVTPILSKLKTMRDAE----DELKIKTSQLEATEKELANLKNMAEKYQHLKQQWEMKSEE 706
Query: 159 AKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKAL-NVEQ 217
A+L K+ + + L ++ + E LK E + +R + + KAL N +
Sbjct: 707 AELLQTKIQQSAYHKQQEDLLALKK-TIAECEETLKKTEES-QRKAE--EEYKALENKMK 762
Query: 218 EKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAE 252
+ ER ++ +K+ S KKK MK+ +
Sbjct: 763 NAEAERGKEIKNAQQKLNSAKKKADDSSRKMKEKQ 797
Score = 46 (21.3 bits), Expect = 5.9e-11, Sum P(3) = 5.9e-11
Identities = 13/47 (27%), Positives = 25/47 (53%)
Query: 375 SQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNK 421
+++L+ +Q Q K ++E +L K T+ +C + LK E+ K
Sbjct: 707 AELLQTKIQ--QSAYHK-QQEDLLALKK-TIAECEETLKKTEESQRK 749
Score = 44 (20.5 bits), Expect = 1.2e-06, Sum P(4) = 1.2e-06
Identities = 14/45 (31%), Positives = 26/45 (57%)
Query: 651 EDEAA--KLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIE 693
ED+ A ++K +E++ + +++K K E E +L K+K S E
Sbjct: 427 EDQEAFEAIRKTKEKLQD--EMKKLKYEEAEQEAHLAKKKQLSSE 469
>UNIPROTKB|F1P3C6 [details] [associations]
symbol:SMC4 "Structural maintenance of chromosomes protein"
species:9031 "Gallus gallus" [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0006310 "DNA
recombination" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000796 "condensin complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0007076 "mitotic chromosome
condensation" evidence=IEA] [GO:0010032 "meiotic chromosome
condensation" evidence=IEA] [GO:0045132 "meiotic chromosome
segregation" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0051383 "kinetochore organization"
evidence=IEA] InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0006281
GO:GO:0006310 GO:GO:0007076 GO:GO:0000796 GO:GO:0007062
GeneTree:ENSGT00580000081617 SUPFAM:SSF75553 OMA:IAIEFLT
EMBL:AADN02021066 IPI:IPI00573837 Ensembl:ENSGALT00000015551
ArrayExpress:F1P3C6 Uniprot:F1P3C6
Length = 1300
Score = 138 (53.6 bits), Expect = 1.2e-11, Sum P(4) = 1.2e-11
Identities = 76/345 (22%), Positives = 153/345 (44%)
Query: 651 EDEAAKLQKEREEIINIV---QIE----KRKRREMENHINLRKRKLESIEKE-DDINTAL 702
+D+ K+ +E +E + + Q+ R ++ E+ + ++++ EKE D+ L
Sbjct: 900 QDKVDKINQEIDECTSAITKAQVAIKTAHRNLKKSEDSVLRTEKEIGDNEKEIKDLTEEL 959
Query: 703 AKLVDQAAD-LN-IQQFKYAI-----EIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELE 755
L D+A + LN +Q + A+ E +NLL E+ + + E ++ KI +++
Sbjct: 960 TTLEDKATEVLNDCRQAEEALPAVQEEHRNLLQEMRAIQDDEHELRKEALNIKFKIEQID 1019
Query: 756 FNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIE 815
++ H Q+ + Y +KE+ H + K E + ++ E E E ++ P I
Sbjct: 1020 SHISTH-----QSKIKY--WQKEISKLSLHPIEDK-PPEELPVLSQE-ELEAIKDPDIIT 1070
Query: 816 ELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEAD----KKELKRFLAEID 871
A ++ + N + EY R+ E+L K+ A+ E RF +
Sbjct: 1071 NQIALLEAQCHEMKP----NLGAIAEY----RRKEELYLKRVAELDDITNERDRFRQAFE 1122
Query: 872 ALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKF--GILIKVKFRQSG 929
L+++ L I N+Q + + G+ L+ +S D F GI+ V+ +
Sbjct: 1123 DLRKQRLNEFMAGFNVITNKLKENYQMLTLGGDAELELVDS-LDPFSEGIMFSVRPPKKS 1181
Query: 930 QLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMD 974
++ + SGGE+++S++ + +L P +DEI+ +D
Sbjct: 1182 WKKIFNL---SGGEKTLSSLALVFALHHYKPTPLYFMDEIDAALD 1223
Score = 106 (42.4 bits), Expect = 1.2e-11, Sum P(4) = 1.2e-11
Identities = 70/305 (22%), Positives = 124/305 (40%)
Query: 44 RLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSIGAYVKRGEESGYIK--------- 94
R + +IGPNGSGKS+++ A+ G Q + R+ + + EE I+
Sbjct: 104 RFSCIIGPNGSGKSNVIDAMLFVFGYRAQKI-RSKKLSVLIHNSEEHTDIQSCSVEVHFQ 162
Query: 95 --ISLRGDTKE----EHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQ 148
I GD E + + R N S + NGK +V + + I +++
Sbjct: 163 KIIDKEGDDYEVIPNSNFCVSRTAYRDNSSVYHINGKKSTFKDVGILLRSHGIDLDHNRF 222
Query: 149 FLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKL-KTIECTVKRNGDTL 207
+ Q V + A + P E E + + + L L + +E ++ G+ L
Sbjct: 223 LILQGEVEQIAMMKPKGQTEHDEGMLEYLEDLIGSARLRAPIQTLCRRVETLNEQRGEKL 282
Query: 208 NQLKALNVEQEKD-VERVRQRA-ELLEKVESM-KKKLPWLKYDMKKAEYIXXXXXXXXXX 264
N++K VE+EKD +E + +A E L M K+K +Y + +
Sbjct: 283 NRVKM--VEKEKDALEGDKNKAIEFLSLENKMFKEKNHICQYYIYDLQ--KRINDLETQK 338
Query: 265 XXXXXXXNTLHEFSKPI--EGKKQEKAILDGDCKKLSSLINENSKRRMDFLEKVDQGVQV 322
++E S + E K + KA+ D + KK+ + + + F + Q V+V
Sbjct: 339 ENIQKETKDINEKSSKLADEMKSKSKALKDLE-KKIDKITVLIEENKNKFTQLDLQDVKV 397
Query: 323 QGKYK 327
+ K K
Sbjct: 398 REKLK 402
Score = 91 (37.1 bits), Expect = 7.0e-07, Sum P(4) = 7.0e-07
Identities = 50/230 (21%), Positives = 99/230 (43%)
Query: 659 KEREEIINIVQIEKRKRREMENHINLRKRKLESI-EKEDDINTALAKLVDQAADLNIQQF 717
KE E + +K K++E+E +N K+ E + E+ + + + +L + D N ++
Sbjct: 837 KELEANVTAAAPDKNKQKELEKVLNSYKKDYERVSEQAGKMESEVKRLHNLIIDFNNRKL 896
Query: 718 KYAIE-IKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYEDCK 776
K + + + EI C + + +A I+ NLK+ E L+ D +
Sbjct: 897 KTQQDKVDKINQEIDECTSAITKAQVA-------IKTAHRNLKKSEDSVLRTEKEIGDNE 949
Query: 777 KEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQ 836
KE++ + L+ + +A + + E+ +P EE +Q+ + + L +
Sbjct: 950 KEIKDLTEELTTLEDKATEVLNDCRQAEEA---LPAVQEEHRNLLQEMRAIQDDEHELRK 1006
Query: 837 NILQEYEHRQRQIED-LSTKQEADK---KELKRF-LAEIDALKEKWLPTL 881
L + + QI+ +ST Q K KE+ + L I+ + LP L
Sbjct: 1007 EALN-IKFKIEQIDSHISTHQSKIKYWQKEISKLSLHPIEDKPPEELPVL 1055
Score = 85 (35.0 bits), Expect = 2.7e-06, Sum P(4) = 2.7e-06
Identities = 51/226 (22%), Positives = 89/226 (39%)
Query: 777 KEVEHCRKHLS-DAKR--QAESIAFITPE----LEKEFLEMPTTIEELEAAIQD----NI 825
+EV L D++R Q E F E L+K EM T+E+ A+IQ I
Sbjct: 771 EEVNRLESELQRDSQRAVQCEEEKFQLEEDITKLQKNVREMRNTLEKYTASIQSFSEQEI 830
Query: 826 SQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLV 885
+ L N+ + +Q ++L + KK+ +R ++E E + L NL+
Sbjct: 831 RLKGQVKELEANVTAAAPDKNKQ-KELEKVLNSYKKDYER-VSEQAGKMESEVKRLHNLI 888
Query: 886 AQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLE--VLSAHHQSG-G 942
N + Q+ +DE S K + IK R + E VL + G
Sbjct: 889 IDFNNRKLKTQQDKVDKINQEIDECTSAITKAQVAIKTAHRNLKKSEDSVLRTEKEIGDN 948
Query: 943 ERSVSTILY-LVSLQDLTNCPFRVVDEINQGMDPINE--RKMFQQL 985
E+ + + L +L+D + + + + E R + Q++
Sbjct: 949 EKEIKDLTEELTTLEDKATEVLNDCRQAEEALPAVQEEHRNLLQEM 994
Score = 81 (33.6 bits), Expect = 6.4e-06, Sum P(4) = 6.4e-06
Identities = 25/141 (17%), Positives = 63/141 (44%)
Query: 750 KIRELEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLE 809
++ LE L++ + A+Q ++++ +K++ + + E ++ +
Sbjct: 772 EVNRLESELQRDSQRAVQCEEEKFQLEEDITKLQKNVREMRNTLEKYTASIQSFSEQEIR 831
Query: 810 MPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAE 869
+ ++ELEA + N L + +L Y+ ++ + + K E++ K L + +
Sbjct: 832 LKGQVKELEANVTAAAPDKNKQKEL-EKVLNSYKKDYERVSEQAGKMESEVKRLHNLIID 890
Query: 870 IDALKEKWLPTLRNLVAQINE 890
+ K L T ++ V +IN+
Sbjct: 891 FNNRK---LKTQQDKVDKINQ 908
Score = 71 (30.1 bits), Expect = 1.0e-06, Sum P(3) = 1.0e-06
Identities = 21/79 (26%), Positives = 41/79 (51%)
Query: 166 LLEETEKAVGDPQLPVQHCALVEK----SSKLKTIECTVKRNGDTLNQLKALNVEQEKDV 221
L+EE + QL +Q + EK SK K +E ++++ + + +LK + EK++
Sbjct: 379 LIEENKNKF--TQLDLQDVKVREKLKHAKSKAKKLEKQLQKDKEKVEELKNVPSSSEKNI 436
Query: 222 ERVRQRAELLEKVESMKKK 240
+ ELLEK + +++
Sbjct: 437 SDATSKKELLEKAKDKEEE 455
Score = 66 (28.3 bits), Expect = 0.00025, Sum P(3) = 0.00025
Identities = 49/197 (24%), Positives = 93/197 (47%)
Query: 646 EQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKL 705
E R I+D+ +L+KE +NI K K ++++HI+ + K++ +KE +L +
Sbjct: 993 EMRAIQDDEHELRKEA---LNI----KFKIEQIDSHISTHQSKIKYWQKEIS-KLSLHPI 1044
Query: 706 VDQAAD-LNI--QQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHE 762
D+ + L + Q+ AI+ +++ ++ A+ H A I E ++ E
Sbjct: 1045 EDKPPEELPVLSQEELEAIKDPDIITNQIALL--EAQCHEMKPNLGA-IAEY----RRKE 1097
Query: 763 KLALQASLHYEDCKKEVEHCRKHLSDAKRQA--ESIA-F--ITPELEKEFLEMPTTIEEL 817
+L L+ +D E + R+ D ++Q E +A F IT +L KE +M T +
Sbjct: 1098 ELYLKRVAELDDITNERDRFRQAFEDLRKQRLNEFMAGFNVITNKL-KENYQMLTLGGDA 1156
Query: 818 EAAIQDNISQ-ANSIFF 833
E + D++ + I F
Sbjct: 1157 ELELVDSLDPFSEGIMF 1173
Score = 65 (27.9 bits), Expect = 0.00031, Sum P(3) = 0.00031
Identities = 47/236 (19%), Positives = 100/236 (42%)
Query: 647 QRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHI-NLRKRKLESIEKEDDINTALAKL 705
QR ++ E K Q E E+I + + + R +E + +++ + I + + A +
Sbjct: 785 QRAVQCEEEKFQLE-EDITKLQKNVREMRNTLEKYTASIQSFSEQEIRLKGQVKELEANV 843
Query: 706 VDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAK-IREL--EFN---LK 759
A D N Q+ E++ +L + + +E + K + L +FN LK
Sbjct: 844 TAAAPDKNKQK-----ELEKVLNSYKK-DYERVSEQAGKMESEVKRLHNLIIDFNNRKLK 897
Query: 760 QHEKLALQASLHYEDCKKEVEHCRKHLSDA----KRQAESIAFITPEL---EKEFLEMP- 811
+ + + ++C + + + A K+ +S+ E+ EKE ++
Sbjct: 898 TQQDKVDKINQEIDECTSAITKAQVAIKTAHRNLKKSEDSVLRTEKEIGDNEKEIKDLTE 957
Query: 812 --TTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKR 865
TT+E+ + ++ QA +QE EHR ++++ Q+ D+ EL++
Sbjct: 958 ELTTLEDKATEVLNDCRQAEEAL----PAVQE-EHRNL-LQEMRAIQD-DEHELRK 1006
Score = 62 (26.9 bits), Expect = 8.0e-06, Sum P(3) = 8.0e-06
Identities = 19/82 (23%), Positives = 41/82 (50%)
Query: 165 KLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERV 224
K + E + D ++ + AL + K+ I ++ N + QL +V+ + ++
Sbjct: 346 KDINEKSSKLAD-EMKSKSKALKDLEKKIDKITVLIEENKNKFTQLDLQDVKVREKLKHA 404
Query: 225 RQRAELLEK-VESMKKKLPWLK 245
+ +A+ LEK ++ K+K+ LK
Sbjct: 405 KSKAKKLEKQLQKDKEKVEELK 426
Score = 61 (26.5 bits), Expect = 5.0e-05, Sum P(3) = 5.0e-05
Identities = 31/158 (19%), Positives = 69/158 (43%)
Query: 85 KRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITK-RFNIQV 143
K E+ + SL+ +T+E I ++ + + K F V +++ + +I +
Sbjct: 452 KEEEKLKQVMSSLQEETRE----IQKEKEGKEKELMEFCKTVNDARSKMDVAQAELDIYL 507
Query: 144 NNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDP--QLPVQHCALVEKSSKLKTIECTVK 201
+ Q + A ++ + L++ + A+ D +LP L EK +KL+ ++
Sbjct: 508 TRYNTAVSQLDEAKEALMTTSETLKQRKAAIKDIDIKLPTAEQELKEKENKLEKLKKEEL 567
Query: 202 RNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKK 239
D + L+ E + + + R R ++LE + K+
Sbjct: 568 NAQDLVRNLRQKVEEAKSSLAQHRSRGKVLEALLEQKR 605
Score = 59 (25.8 bits), Expect = 1.2e-11, Sum P(4) = 1.2e-11
Identities = 19/69 (27%), Positives = 32/69 (46%)
Query: 386 QKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAENIFEAYCWLQQHR 445
+K+LQK +KEK+ + K + D K +LL ++ E + + LQ+
Sbjct: 412 EKQLQK-DKEKV-EELKNVPSSSEKNISDATSKK-ELLEKAKDKEEEKLKQVMSSLQEET 468
Query: 446 HELNKEAYG 454
E+ KE G
Sbjct: 469 REIQKEKEG 477
Score = 47 (21.6 bits), Expect = 0.00024, Sum P(3) = 0.00024
Identities = 12/43 (27%), Positives = 24/43 (55%)
Query: 382 VQANQKRLQKSEKEKILNQNKLT--LRQCSDRLKDMEDKNNKL 422
++ ++ +QK K+ +KL ++ S LKD+E K +K+
Sbjct: 334 LETQKENIQKETKDINEKSSKLADEMKSKSKALKDLEKKIDKI 376
Score = 45 (20.9 bits), Expect = 1.2e-11, Sum P(4) = 1.2e-11
Identities = 12/34 (35%), Positives = 21/34 (61%)
Query: 646 EQRLIEDEAAKLQKEREEIINIVQIEKRKRREME 679
EQ L E E KL+K ++E +N + + R+++E
Sbjct: 549 EQELKEKEN-KLEKLKKEELNAQDLVRNLRQKVE 581
Score = 38 (18.4 bits), Expect = 1.6e-09, Sum P(3) = 1.6e-09
Identities = 12/57 (21%), Positives = 28/57 (49%)
Query: 378 LELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAENI 434
LE +Q + +R + E+EK + +T Q +++M + K ++++ + I
Sbjct: 776 LESELQRDSQRAVQCEEEKFQLEEDITKLQ--KNVREMRNTLEKYTASIQSFSEQEI 830
>UNIPROTKB|E1C782 [details] [associations]
symbol:E1C782 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000796 "condensin complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0007076 "mitotic
chromosome condensation" evidence=IEA] InterPro:IPR010935
InterPro:IPR027120 Pfam:PF06470 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005694 GO:GO:0051276
SUPFAM:SSF75553 GeneTree:ENSGT00550000074857 PANTHER:PTHR18937:SF9
IPI:IPI00579121 EMBL:AADN02057751 EMBL:AADN02057752
EMBL:AADN02057753 EMBL:AADN02057754 EMBL:AADN02057755
Ensembl:ENSGALT00000025306 ArrayExpress:E1C782 Uniprot:E1C782
Length = 1190
Score = 126 (49.4 bits), Expect = 1.3e-11, Sum P(3) = 1.3e-11
Identities = 78/355 (21%), Positives = 154/355 (43%)
Query: 650 IEDEAAKLQKEREEIINIVQIEKRKRREMENHI-NLRKRKLESI---EKEDDINTALAKL 705
I++ KL +++ + + K K++E+E + L + K E ++ + A+A L
Sbjct: 791 IKNAQQKLNSAKKKADDSSRKMKEKQQEVEALVLELEQLKQEQASYKQQSEAAQQAIASL 850
Query: 706 VDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLA 765
+Q + L + K +KN E+ S K AE+ + + AK ++E +Q+ +L
Sbjct: 851 KEQVSALEAEAVKTRESLKNAENELSSEKGLMAER---TKDIKAKSAKIEKYREQNNELI 907
Query: 766 LQASLHYEDCKKEVEHCRKHLSDAKRQAESIA--FITPELEKEFLEMPTTIEELEA---- 819
+ D + E +KH SD + + + + EKE T + EA
Sbjct: 908 HRNYFKEGD---QWEKKQKH-SDVMDKLDKLLKEYKWIASEKELFGQADTTYDFEANNPK 963
Query: 820 ----AIQDNISQANSIF-FLNQ---NILQEYEHRQRQIEDLSTKQEADKKELKRFLAEID 871
+Q +++ + LN N+L E E +R+ DL K+ + + + LA I+
Sbjct: 964 ETGQKLQKLLTKKEKLEKSLNMRAMNLLSEAE--ERKYNDLMKKKRIVENDKIKILATIE 1021
Query: 872 ALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQS-GQ 930
L K L ++N+ F F + + L + K IL ++FR G
Sbjct: 1022 ELDRKKNKALHIAWEKVNKDFGSIFSMLLPGAKAMLVPSK----KQNILDGLEFRVGLGD 1077
Query: 931 LEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQL 985
+ + SGG+RS++ + ++++ P ++DE++ +D + + + Q L
Sbjct: 1078 IWKENLTELSGGQRSLAALSLILAILLFKPAPIYILDEVDAALDLSHTQNIGQML 1132
Score = 118 (46.6 bits), Expect = 1.3e-11, Sum P(3) = 1.3e-11
Identities = 52/226 (23%), Positives = 104/226 (46%)
Query: 46 NLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSIGAYVKRGEESGYIK--ISLRGDTKE 103
N + G NGSGKS+++ +I LG RA+S+ V + ++G K +S+ D +
Sbjct: 28 NAITGLNGSGKSNILDSICFLLGISNLSQVRASSLQDLVYKNGQAGVNKATVSITFDNSD 87
Query: 104 -----------EHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQFL-- 150
+ +TI R++ ++++ NG V ++ + VNN FL
Sbjct: 88 KKNSPLGFENNDEITITRQVIVGGRNKYLINGMNASNNRVQDLFGSVGLNVNN-PHFLIM 146
Query: 151 PQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQL 210
Q ++ + + P ++L E+A G + C K + KTIE + L+++
Sbjct: 147 QQGQITKVLNMKPTEILAMIEEAAGTR---MYECM---KITAHKTIE----KKESKLDEI 196
Query: 211 KALNVEQ-EKDVERVRQ-RAELLEKVESMKKKLPWLKYDMKKAEYI 254
+ + E+ +E++++ RA LE + M +++ L+ +Y+
Sbjct: 197 RRIITEEISPTLEKLKEARASYLE-YQKMTREVENLRRIYVAFQYV 241
Score = 91 (37.1 bits), Expect = 4.6e-08, Sum P(3) = 4.6e-08
Identities = 62/266 (23%), Positives = 109/266 (40%)
Query: 676 REMENHINLRKRKLESIEKEDDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKW 735
R+ E+ + ++ +LE+ EKE LA L + A Q K E+K+ E++ K
Sbjct: 682 RDAEDELKIKTSQLEATEKE------LANLKNMAE--KYQHLKQQWEMKSEEAELLQTKI 733
Query: 736 SYAEKHMASIEFDA---KIRELEFNLKQHEKLALQASLHYEDCK-----------KEVEH 781
+ H + A I E E LK+ E+ +A Y+ + KE+++
Sbjct: 734 QQSAYHKQQEDLLALKKTIAECEETLKKTEESQRKAEEEYKALENKMKNAEAERGKEIKN 793
Query: 782 CRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEEL--EAAIQDNISQA--NSIFFLNQN 837
++ L+ AK++A+ + E ++E + +E+L E A S+A +I L +
Sbjct: 794 AQQKLNSAKKKADDSSRKMKEKQQEVEALVLELEQLKQEQASYKQQSEAAQQAIASLKEQ 853
Query: 838 ILQEYEHRQRQIEDLSTKQEADKKELKRFLAE-IDALKEKWLPTLRNLVAQINETFSRNF 896
+ + E L + E K +AE +K K + Q NE RN+
Sbjct: 854 VSALEAEAVKTRESLKNAENELSSE-KGLMAERTKDIKAK-SAKIEKYREQNNELIHRNY 911
Query: 897 QEMAVAGEVSLDEHESDFDKFGILIK 922
+ E +H DK L+K
Sbjct: 912 FKEGDQWEKK-QKHSDVMDKLDKLLK 936
Score = 66 (28.3 bits), Expect = 3.3e-05, Sum P(3) = 3.3e-05
Identities = 19/69 (27%), Positives = 34/69 (49%)
Query: 188 EKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAE----LLEKVESMKKKLPW 243
E + I T ++ D + +LK EQE + + +Q + L E ES++ K P+
Sbjct: 446 EDQEAFEAIRKTKEKLQDEMKKLKYEEAEQEAHLAKKKQLSSEISSLRELCESIEAKHPY 505
Query: 244 LKYDMKKAE 252
L+++ K E
Sbjct: 506 LRFEYKNPE 514
Score = 58 (25.5 bits), Expect = 1.3e-11, Sum P(3) = 1.3e-11
Identities = 22/89 (24%), Positives = 45/89 (50%)
Query: 383 QANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHA-LRNSGAENIFEAYCWL 441
QAN+K++ +S E N+ K+ ++ + ++++ E KNN++ + L + + E C +
Sbjct: 258 QANKKKIFESMAE---NEKKV--KELAQQIEETEKKNNEVNYPKLTKTCKDRSLEGVC-V 311
Query: 442 QQHRHELNKEAYGPVLLEVNVSNRAHANY 470
H L E ++EV + +NY
Sbjct: 312 SDKMH-LKWEILMTSVMEVEKRDSNLSNY 339
Score = 57 (25.1 bits), Expect = 0.00025, Sum P(3) = 0.00025
Identities = 25/101 (24%), Positives = 45/101 (44%)
Query: 152 QDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLK 211
Q + F LSPV L+ + A+ + C ++ KLK + +K + ++
Sbjct: 387 QKSLTHFMLLSPVSLVLRAKAAICHS---CKQC--LQAQMKLKYAQQELKTKQAEVKKMD 441
Query: 212 ALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAE 252
E ++ E +R+ E L+ + MKK LKY+ + E
Sbjct: 442 GSYKEDQEAFEAIRKTKEKLQ--DEMKK----LKYEEAEQE 476
Score = 52 (23.4 bits), Expect = 0.00075, Sum P(2) = 0.00074
Identities = 37/155 (23%), Positives = 67/155 (43%)
Query: 105 HLT-IMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLT---QFLPQ--DRVCEF 158
H+T I+ K+ T +E ++ K LE T++ + N+ Q L Q + E
Sbjct: 670 HVTPILSKLKTMRDAE----DELKIKTSQLEATEKELANLKNMAEKYQHLKQQWEMKSEE 725
Query: 159 AKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKAL-NVEQ 217
A+L K+ + + L ++ + E LK E + +R + + KAL N +
Sbjct: 726 AELLQTKIQQSAYHKQQEDLLALKK-TIAECEETLKKTEES-QRKAE--EEYKALENKMK 781
Query: 218 EKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAE 252
+ ER ++ +K+ S KKK MK+ +
Sbjct: 782 NAEAERGKEIKNAQQKLNSAKKKADDSSRKMKEKQ 816
Score = 46 (21.3 bits), Expect = 2.1e-10, Sum P(3) = 2.1e-10
Identities = 13/47 (27%), Positives = 25/47 (53%)
Query: 375 SQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNK 421
+++L+ +Q Q K ++E +L K T+ +C + LK E+ K
Sbjct: 726 AELLQTKIQ--QSAYHK-QQEDLLALKK-TIAECEETLKKTEESQRK 768
>UNIPROTKB|F1NYB2 [details] [associations]
symbol:SMC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0051276
"chromosome organization" evidence=IEA] [GO:0000785 "chromatin"
evidence=IEA] [GO:0000800 "lateral element" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0007052 "mitotic spindle organization" evidence=IEA]
[GO:0007126 "meiosis" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0016363 "nuclear matrix"
evidence=IEA] [GO:0019827 "stem cell maintenance" evidence=IEA]
[GO:0032876 "negative regulation of DNA endoreduplication"
evidence=IEA] [GO:0034991 "nuclear meiotic cohesin complex"
evidence=IEA] [GO:0036033 "mediator complex binding" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] InterPro:IPR010935
Pfam:PF06470 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0007126 GO:GO:0005737 GO:GO:0007165
GO:GO:0007052 GO:GO:0000785 GO:GO:0016363 GO:GO:0000922
GO:GO:0032876 GO:GO:0051276 GO:GO:0000800 SUPFAM:SSF75553
GO:GO:0030893 OMA:NKVLEHF GeneTree:ENSGT00580000081628
EMBL:AADN02030887 EMBL:AADN02030888 IPI:IPI00598955
Ensembl:ENSGALT00000013979 ArrayExpress:F1NYB2 Uniprot:F1NYB2
Length = 1219
Score = 134 (52.2 bits), Expect = 1.3e-11, Sum P(3) = 1.3e-11
Identities = 86/365 (23%), Positives = 151/365 (41%)
Query: 643 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRRE-MENHIN-LRKRK----LESIEKE- 695
+Q E R + +E KL+ + + RKR + +E +N LR+ + L + E
Sbjct: 809 LQQENRQLLNERIKLEGIITRVETYLNENLRKRLDQVEQELNELRETEGGTVLTATTSEL 868
Query: 696 DDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEK-HMASIEFDAKIREL 754
+ IN + + ++ DL+ K IK L + +W EK HM +I D K EL
Sbjct: 869 EAINKRVKDTLARSDDLDNSIDKTEAGIKELQKSME--RWKNMEKEHMDAINHDTK--EL 924
Query: 755 EFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDA--KRQAESIAFITPELEKEFLEMPT 812
E + + + L+ E+C K++ +A K Q S+ + +LE+ E+
Sbjct: 925 E-KMTNRQGMLLKKK---EECMKKIRELGSLPQEAFEKYQTLSLKQLFRKLEQCNTELKK 980
Query: 813 TIEELEAAIQD--NISQANSIFFLNQNILQE-YEHRQRQIEDLST-KQEADKKELKRFLA 868
+ A+ N S+ Q L Y+ + L K EA + K+
Sbjct: 981 YSHVNKKALDQFVNFSEQKEKLIKRQEELDRGYKSIMELMNVLELRKYEAIQLTFKQVSK 1040
Query: 869 EIDALKEKWLP----TLRNLVAQINETFSRNFQEMAVAGEVSLDEHES--DFDKF-GILI 921
+ +K +P TL + + S++ E + E S D+F G+ I
Sbjct: 1041 NFSEVFQKLVPGGKATLVMKKGDVEGSQSQDEGEGSTESERGSGSQSSVPSVDQFTGVGI 1100
Query: 922 KVKFRQSGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKM 981
+V F Q E+ SGG++S+ + + ++Q PF + DEI+Q +D RK
Sbjct: 1101 RVSFTGK-QGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFYLFDEIDQALDA-QHRKA 1158
Query: 982 FQQLV 986
++
Sbjct: 1159 VSDMI 1163
Score = 121 (47.7 bits), Expect = 1.3e-11, Sum P(3) = 1.3e-11
Identities = 79/387 (20%), Positives = 148/387 (38%)
Query: 23 IIEIELHNFMTF-DHLICKP-GSRLNLVIGPNGSGKSSLV-CAIALALGGDTQLLGRATS 79
I ++ + F ++ D I P S+ N+++G NGSGKS+ AI L + L
Sbjct: 3 IKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAAIQFVLSDEFSHLPPLKR 62
Query: 80 IGAYVKRGEESGYIK--ISLRGDTKEEHLTI------MRKIDTRNKSEWFFNGKVVPKGE 131
+ A + G I + + D + L I +R++ K ++F + K+V K +
Sbjct: 63 L-ALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKND 121
Query: 132 VLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSS 191
V+ + + +N + Q ++ + A + L+ + G V E S
Sbjct: 122 VMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTR---VYDERKEESIS 178
Query: 192 KLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKA 251
+K E KR + +N+L E+ +E ++ +K + M++ L + Y+ +
Sbjct: 179 LMKETEG--KR--EKINELLKYIEERLHTLEEEKEELAQYQKWDKMRRALEYTIYNQELN 234
Query: 252 EYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCK-KLSSLINENSKRRM 310
E L + + K +E + K K+S++ E +
Sbjct: 235 ETRAKLDELSAKRETSGEKSRQLRDAQQDARDKMEEIERQVRELKTKISAMKEEKEQLSA 294
Query: 311 DFLEKVDQGVQVQGKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPAY-EPPHDK 369
+ E++ Q +++ K K +LK R Q A EP +
Sbjct: 295 ERQEQIKQRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELAETEPKFNS 354
Query: 370 I-EKLGSQILELGVQANQKRLQKSEKE 395
+ EK I L QA Q+R K+
Sbjct: 355 VKEKEERGIARLA-QATQERTDLYAKQ 380
Score = 73 (30.8 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 21/75 (28%), Positives = 38/75 (50%)
Query: 802 ELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKK 861
EL+K+ + + ELEA + +N+ + N ++N I + Q++ + T+Q K
Sbjct: 678 ELQKDVRKAEEELGELEAKLNENLRR-NIEKWINNEI----DQLMNQMQQIETQQRKFKA 732
Query: 862 ELKRFLAEIDALKEK 876
L+E+ LKEK
Sbjct: 733 SRDSILSEMKMLKEK 747
Score = 72 (30.4 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 69/361 (19%), Positives = 154/361 (42%)
Query: 643 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEK-----EDD 697
+ + + IE + K + R+ I++ +++ K KR++ E ++R L+S+E E
Sbjct: 716 LMNQMQQIETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMEST 775
Query: 698 INTALAKL-VDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEF 756
+ A+L D + L+++ K + L EI + + I+ + I +E
Sbjct: 776 RESLKAELGTDLLSQLSLEDQK---RVDALNDEIRQLQQENRQLLNERIKLEGIITRVET 832
Query: 757 NLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAES---IAFITPELEKEFLEMPTT 813
L E+ +K ++ + L++ R+ E + T ELE + T
Sbjct: 833 YLN-------------ENLRKRLDQVEQELNEL-RETEGGTVLTATTSELEAINKRVKDT 878
Query: 814 IEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDAL 873
+ + + ++I + + Q ++ +++ +++ D D KEL++ L
Sbjct: 879 LARSDD-LDNSIDKTEAGIKELQKSMERWKNMEKEHMDAINH---DTKELEKMTNRQGML 934
Query: 874 ---KEKWLPTLRNLVAQINETFSRNFQEMAVAGEV-SLDEHESDFDKFGILIKVKFRQ-- 927
KE+ + +R L + E F + +Q +++ L++ ++ K+ + K Q
Sbjct: 935 LKKKEECMKKIRELGSLPQEAFEK-YQTLSLKQLFRKLEQCNTELKKYSHVNKKALDQFV 993
Query: 928 --SGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQL 985
S Q E L Q +R +I+ L+++ +L + + + + N ++FQ+L
Sbjct: 994 NFSEQKEKL-IKRQEELDRGYKSIMELMNVLELRK--YEAIQLTFKQVSK-NFSEVFQKL 1049
Query: 986 V 986
V
Sbjct: 1050 V 1050
Score = 62 (26.9 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 37/155 (23%), Positives = 63/155 (40%)
Query: 362 AYEPPHDKIEKLGSQILEL-----GVQANQKRLQKSEKEKILNQNKLTLR--QCSDRLKD 414
A + DK+E++ Q+ EL ++ +++L +E+I + KL L+ D L
Sbjct: 260 AQQDARDKMEEIERQVRELKTKISAMKEEKEQLSAERQEQIKQRTKLELKAKDLQDELAG 319
Query: 415 MEDKNNKLLHALRNSGAENIFEAYCWLQQHRHELN----KEAYGPVLLEVNVSNRAHANY 470
++ +LL R E I E L + + N KE G L R Y
Sbjct: 320 NSEQRKRLLKE-RQKLLEKIEEKQKELAETEPKFNSVKEKEERGIARLAQATQERTDL-Y 377
Query: 471 LEDHVGHYIWKSFITQDAGDRDFLAKNLKPFDVPI 505
+ G F +++ D+ ++ K LK D I
Sbjct: 378 AKQGRG----SQFTSKEERDK-WIKKELKSLDQAI 407
Score = 47 (21.6 bits), Expect = 1.3e-11, Sum P(3) = 1.3e-11
Identities = 28/145 (19%), Positives = 66/145 (45%)
Query: 386 QKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAENIFEAYCWLQQHR 445
Q+R K+ ++ IL++ K+ LK+ ++ K + S +++ + ++ R
Sbjct: 726 QQRKFKASRDSILSEMKM--------LKEKRQQSEKTFMPKQRS-LQSLEASLHAMESTR 776
Query: 446 HELNKEAYGPVLLEVNVSNRAHANYLEDHVGHYIWKSFITQDAGDRDFLAKNLKPFDV-- 503
L E +L ++++ ++ + L D + + Q+ +R L + +K +
Sbjct: 777 ESLKAELGTDLLSQLSLEDQKRVDALNDEIRQ------LQQE--NRQLLNERIKLEGIIT 828
Query: 504 PILNYVSNESSRKEPFQISEEMRAL 528
+ Y+ NE+ RK Q+ +E+ L
Sbjct: 829 RVETYL-NENLRKRLDQVEQELNEL 852
>ZFIN|ZDB-GENE-090506-9 [details] [associations]
symbol:smc1a "structural maintenance of chromosomes
1A" species:7955 "Danio rerio" [GO:0030261 "chromosome
condensation" evidence=IEA] [GO:0005694 "chromosome" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA] [GO:0051276
"chromosome organization" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
ZFIN:ZDB-GENE-090506-9 GO:GO:0005524 GO:GO:0005634 GO:GO:0005694
GO:GO:0006281 GO:GO:0006310 GO:GO:0030261 GO:GO:0007062
SUPFAM:SSF75553 CTD:8243 KO:K06636 GeneTree:ENSGT00580000081569
EMBL:CR354431 IPI:IPI00506664 RefSeq:NP_001155103.1
UniGene:Dr.120420 Ensembl:ENSDART00000078148 GeneID:559665
KEGG:dre:559665 OMA:ERIRHAN NextBio:20883076 Uniprot:E7F0X6
Length = 1232
Score = 132 (51.5 bits), Expect = 1.6e-11, Sum P(4) = 1.6e-11
Identities = 82/383 (21%), Positives = 163/383 (42%)
Query: 651 EDEAAKLQKEREEIINIV-----QIEKRKRREM--ENHINLRKRKLESIEKE-DDINTAL 702
E+E +L+KE + I+ Q++ K + + + +N + R++E I K+ N L
Sbjct: 846 ENEIERLKKEEHRHMKIIDETMAQLQDLKNQHLTKKGEVNDKNREMEEIRKKLGSANKEL 905
Query: 703 AKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHE 762
+L + + + + + NLL +CK + + S D I + E + +
Sbjct: 906 TQLQKEVTAIETKLEQKRSDRHNLLQ---ACKMQDIKLPLKSGTMD-DISQGEGGSQVED 961
Query: 763 KLA---LQASLHYEDCKKEVEHCR--KHLSDAKRQAESIAFITPELEKEFLEMPTTIEEL 817
++ +S+H ++ E+++ + L DA + E I L++ E + ++ +
Sbjct: 962 AISSPKASSSVHAKEALIEIDYSNLNEDLKDALSEDE-IKGEMNTLQQRLNEQQSILQRI 1020
Query: 818 EAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKW 877
A + + S+ Q E+E +++ + E KKE RF D +
Sbjct: 1021 SAPNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKE--RF----DRFNACF 1074
Query: 878 LPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVK-FRQSGQLEVLSA 936
N + +I + SRN A G + +E D + + K FR L
Sbjct: 1075 ESVATN-IDEIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNL----- 1128
Query: 937 HHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTPQ 996
SGGE++V+ + L ++ PF V+DEI+ +D N K+ ++ S N Q
Sbjct: 1129 ---SGGEKTVAALALLFAIHSYKPAPFFVLDEIDAALDNTNIGKV-ANYIKDQSVQNF-Q 1183
Query: 997 CFLLTPKLLPDLEYSEACSILNI 1019
+++ L + Y++A S++ +
Sbjct: 1184 AIVIS---LKEEFYTKADSLIGV 1203
Score = 112 (44.5 bits), Expect = 1.6e-11, Sum P(4) = 1.6e-11
Identities = 47/158 (29%), Positives = 71/158 (44%)
Query: 26 IELHNFMTFD-HLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI---- 80
IE+ NF ++ I P + +IGPNGSGKS+L+ AI+ L T L R ++
Sbjct: 7 IEIENFKSYKGRQIIGPFHKFTAIIGPNGSGKSNLMDAISFVLAEKTSNL-RVKTLKDLI 65
Query: 81 -GAYV-KRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKR 138
GA V K ++ + D EE T R I + SE+ N KVV + E ++
Sbjct: 66 HGAPVGKPAANRAFVSMVYCEDNGEE-CTFTRAI-IGSSSEYRINSKVVGLSDYSEELEK 123
Query: 139 FNIQVNNLTQFLPQDRVCEFAKLSPVK---LLEETEKA 173
I + + Q V A +P + L EE ++
Sbjct: 124 LGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRS 161
Score = 98 (39.6 bits), Expect = 4.7e-07, Sum P(2) = 4.7e-07
Identities = 58/273 (21%), Positives = 124/273 (45%)
Query: 651 EDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKE-DDINTALAKLVDQA 709
E + AK +KE E + ++ K + H+ L+ KL E+E + +N L++ ++
Sbjct: 195 ERKEAKQEKEEAE-----RYQRLKDEVVRAHVQLQLFKLYHNEEEIEKLNRELSQR-NRE 248
Query: 710 ADLNIQQFKYAIE-IKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQA 768
D + ++ + E +K+ E+ + ++E + K ++ E N K+ + + +
Sbjct: 249 IDKDRKKMDHVEEELKDKKKEL-----GRMMRDQQNVEKEIKEKDAELNQKRPQYIKAKE 303
Query: 769 SLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQA 828
+ ++ K EV RK L +A++ + EL++E + + +E E +++
Sbjct: 304 NTAHKIKKLEV--ARKSLQNAQKMYKKRKADIEELDREQGAVEMSRQEFEERMEEEAQSQ 361
Query: 829 NSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRF----LAEIDAL---KEKWLPT- 880
L +N +++Y HR + E+ S + +EL++F A+ D L + K + T
Sbjct: 362 GQDLTLEENQVKQY-HRLK--EEASKRAATLAQELEKFNRDQKADQDRLDLEERKKIETE 418
Query: 881 --LRNLVAQINETFSR--NFQEMAVAGEVSLDE 909
++ + +I E R ++ SLDE
Sbjct: 419 AKIKQKIREIEENQKRIEKLEDYIATSRQSLDE 451
Score = 90 (36.7 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 55/274 (20%), Positives = 121/274 (44%)
Query: 651 EDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAA 710
E+E KL +E + + +++K +E + +K++L + + D N ++ ++ A
Sbjct: 232 EEEIEKLNRELSQRNREIDKDRKKMDHVEEELKDKKKELGRMMR-DQQNVE-KEIKEKDA 289
Query: 711 DLNIQQFKY-------AIEIKNLLV---EIVSCKWSYAEKHMASIE-FDAKIRELEFNLK 759
+LN ++ +Y A +IK L V + + + Y +K A IE D + +E + +
Sbjct: 290 ELNQKRPQYIKAKENTAHKIKKLEVARKSLQNAQKMY-KKRKADIEELDREQGAVEMSRQ 348
Query: 760 Q-HEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELE 818
+ E++ +A +D E +++ + ++ A + ELEK + + L+
Sbjct: 349 EFEERMEEEAQSQGQDLTLEENQVKQYHRLKEEASKRAATLAQELEKFNRDQKADQDRLD 408
Query: 819 AAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWL 878
+ I I Q I +E E Q++IE L ++ L + L E+ +
Sbjct: 409 LEERKKIETEAKI---KQKI-REIEENQKRIEKLEDYIATSRQSLDEQRRMEEELTEE-V 463
Query: 879 PTLRNLVAQINETFSRNFQEMAVAGEVSLDEHES 912
+ + +IN ++ +++ G+ +D E+
Sbjct: 464 ELAKRRIDEINMELNQVMEQL---GDARIDRQEN 494
Score = 73 (30.8 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 45/235 (19%), Positives = 108/235 (45%)
Query: 650 IEDEAAKLQKEREEIINIVQIEKRKRREM-ENHINLRKRKLESIEKEDDINTALAKL-VD 707
+E+E L+ +++E+ +++ ++ +E+ E L +++ + I+ +++ + KL V
Sbjct: 259 VEEE---LKDKKKELGRMMRDQQNVEKEIKEKDAELNQKRPQYIKAKENTAHKIKKLEVA 315
Query: 708 QAADLNIQQF--KYAIEIKNLLVE---IVSCKWSYAEKHMASIEFDAKIRELEFN-LKQH 761
+ + N Q+ K +I+ L E + + + E+ + + LE N +KQ+
Sbjct: 316 RKSLQNAQKMYKKRKADIEELDREQGAVEMSRQEFEERMEEEAQSQGQDLTLEENQVKQY 375
Query: 762 EKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAI 821
+L +AS +E+E K D K + + E E++ +E I++ I
Sbjct: 376 HRLKEEASKRAATLAQELE---KFNRDQKADQDRLDL---E-ERKKIETEAKIKQKIREI 428
Query: 822 QDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEK 876
++N + + Q + ++R E+L+ + E K+ + E++ + E+
Sbjct: 429 EENQKRIEKLEDYIATSRQSLDEQRRMEEELTEEVELAKRRIDEINMELNQVMEQ 483
Score = 63 (27.2 bits), Expect = 1.6e-11, Sum P(4) = 1.6e-11
Identities = 16/56 (28%), Positives = 31/56 (55%)
Query: 178 QLPVQHCAL-VEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLE 232
Q +H +L +++ SKL E + G +N +K + +E+D+ ++R R L+E
Sbjct: 721 QTKTRHLSLNMQEKSKL---ESELANFGPRINDIKRIIQSRERDITQLRDRMNLVE 773
Score = 63 (27.2 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 24/99 (24%), Positives = 46/99 (46%)
Query: 141 IQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTV 200
I V N+ +F +++V +++ +L ET+K QL + L E K+ E TV
Sbjct: 784 IGVRNIREF-EEEKVKRQNEIAKKRLEFETQKTRLAIQLDYEKNQLKEDQEKVMMWEQTV 842
Query: 201 KRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKK 239
K++ + + +LK K ++ + + L+ KK
Sbjct: 843 KKDENEIERLKKEEHRHMKIIDETMAQLQDLKNQHLTKK 881
Score = 44 (20.5 bits), Expect = 5.7e-10, Sum P(5) = 5.7e-10
Identities = 19/53 (35%), Positives = 29/53 (54%)
Query: 369 KIE---KLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDK 418
KIE K+ +I E ++ NQKR++K E + I T RQ D + ME++
Sbjct: 414 KIETEAKIKQKIRE--IEENQKRIEKLE-DYIA-----TSRQSLDEQRRMEEE 458
Score = 43 (20.2 bits), Expect = 5.7e-10, Sum P(5) = 5.7e-10
Identities = 21/90 (23%), Positives = 42/90 (46%)
Query: 168 EETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKA--LNVEQE---KDVE 222
EE EK + +L ++ + + K+ +E +K L ++ NVE+E KD E
Sbjct: 233 EEIEKL--NRELSQRNREIDKDRKKMDHVEEELKDKKKELGRMMRDQQNVEKEIKEKDAE 290
Query: 223 RVRQRAELLEKVESMKKKLPWLKYDMKKAE 252
++R + ++ E+ K+ L+ K +
Sbjct: 291 LNQKRPQYIKAKENTAHKIKKLEVARKSLQ 320
Score = 43 (20.2 bits), Expect = 5.7e-10, Sum P(5) = 5.7e-10
Identities = 21/127 (16%), Positives = 57/127 (44%)
Query: 201 KRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPW--LKYDMKKAEYIXXXX 258
+RN + K ++ +E+ ++ ++ ++ ++++K++ + + K+ +YI
Sbjct: 244 QRNREIDKDRKKMDHVEEELKDKKKELGRMMRDQQNVEKEIKEKDAELNQKRPQYIKAKE 303
Query: 259 XXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENSKRRMDFLEKVDQ 318
+L K + +K + LD ++ ++ E S R +F E++++
Sbjct: 304 NTAHKIKKLEVARKSLQNAQKMYKKRKADIEELD---REQGAV--EMS--RQEFEERMEE 356
Query: 319 GVQVQGK 325
Q QG+
Sbjct: 357 EAQSQGQ 363
Score = 41 (19.5 bits), Expect = 5.7e-10, Sum P(5) = 5.7e-10
Identities = 19/70 (27%), Positives = 32/70 (45%)
Query: 489 GDRDFLAKNLKPFDVPILNYVSNESSRKEPFQISEEMRALGISARLDQVFDAPHAVKEVL 548
G D AK + +D ++ + E K ++ E+M+A A L QV H ++ L
Sbjct: 655 GASDLKAK-ARRWDEKAVDKLK-EKKEKLTEELKEQMKAKRKEAELRQVQSQAHGLQMRL 712
Query: 549 -ISQFGLDSS 557
SQ L+ +
Sbjct: 713 KYSQSDLEQT 722
Score = 41 (19.5 bits), Expect = 1.5e-09, Sum P(4) = 1.5e-09
Identities = 14/59 (23%), Positives = 31/59 (52%)
Query: 368 DKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTL-RQCSDRL---KDMEDKNNKL 422
++IEKL ++ + + ++ R + E+ L K L R D+ K++++K+ +L
Sbjct: 233 EEIEKLNRELSQRNREIDKDRKKMDHVEEELKDKKKELGRMMRDQQNVEKEIKEKDAEL 291
Score = 39 (18.8 bits), Expect = 1.6e-11, Sum P(4) = 1.6e-11
Identities = 18/75 (24%), Positives = 37/75 (49%)
Query: 379 ELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHAL---RNSGAENIF 435
E+GV + +++ E+EK+ QN++ + RL + E + +L L +N E+
Sbjct: 783 EIGV----RNIREFEEEKVKRQNEIAKK----RL-EFETQKTRLAIQLDYEKNQLKEDQE 833
Query: 436 EAYCWLQQHRHELNK 450
+ W Q + + N+
Sbjct: 834 KVMMWEQTVKKDENE 848
>WB|WBGene00004873 [details] [associations]
symbol:smc-3 species:6239 "Caenorhabditis elegans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005694 "chromosome"
evidence=IEA] [GO:0051276 "chromosome organization" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040002 "collagen and cuticulin-based cuticle
development" evidence=IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] [GO:0030261 "chromosome condensation"
evidence=IMP] [GO:0007059 "chromosome segregation" evidence=IMP]
[GO:0007109 "cytokinesis, completion of separation" evidence=IMP]
[GO:0000793 "condensed chromosome" evidence=IDA] [GO:0000794
"condensed nuclear chromosome" evidence=IDA] [GO:0005819 "spindle"
evidence=IDA] [GO:0008278 "cohesin complex" evidence=IDA;IPI]
[GO:0000790 "nuclear chromatin" evidence=IDA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=NAS] InterPro:IPR010935
Pfam:PF06470 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0008340 GO:GO:0009792 GO:GO:0002009
GO:GO:0006898 GO:GO:0040010 GO:GO:0007059 GO:GO:0005819
GO:GO:0004674 GO:GO:0040011 GO:GO:0000790 GO:GO:0040035
GO:GO:0000794 GO:GO:0030261 GO:GO:0007109 GO:GO:0040002
GO:GO:0008278 EMBL:AL117202 eggNOG:COG1196 SUPFAM:SSF75553
HOGENOM:HOG000166512 KO:K06669 OMA:NKVLEHF
GeneTree:ENSGT00580000081628 RefSeq:NP_001129842.1
ProteinModelPortal:B2FDA8 SMR:B2FDA8 STRING:B2FDA8 PaxDb:B2FDA8
EnsemblMetazoa:Y47D3A.26b.1 EnsemblMetazoa:Y47D3A.26b.2
GeneID:176559 KEGG:cel:CELE_Y47D3A.26 CTD:176559
WormBase:Y47D3A.26b InParanoid:B2FDA8 NextBio:893080
ArrayExpress:B2FDA8 Uniprot:B2FDA8
Length = 1261
Score = 135 (52.6 bits), Expect = 2.3e-11, Sum P(3) = 2.3e-11
Identities = 70/295 (23%), Positives = 126/295 (42%)
Query: 23 IIEIELHNFMTF-DHLICKPGS-RLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI 80
I E+ + F ++ D+ S R N+V+G NGSGKS+ AI L + L +
Sbjct: 3 IKEVRITGFRSYKDNTNVSGFSPRSNVVVGRNGSGKSNFFHAIQFVLSDEYAHLKEEQRL 62
Query: 81 GA-YVKRGEESGYIKISLRGDTKEEHLT--------IMRKIDTRNKSEWFFNGKVVPKGE 131
G + G + + ++ + D E+ L I+R++ + K +++ + K+VP+ E
Sbjct: 63 GLLHESTGPKVAHARVEITFDNSEKRLMAFENSEVKIVRQVG-KKKDQYYIDNKMVPRAE 121
Query: 132 VLEITKRFNIQVNNLTQFLPQDRVCEFAKLSP----VKLLEETEKA-VGDPQLPVQHCAL 186
V+ + + +N + Q ++ E A SP +KLL E V D + +
Sbjct: 122 VVNLMESAGFSRSNPYYIVKQGKINELAT-SPDAYKLKLLREVAGTRVYDERK--EESLK 178
Query: 187 VEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKY 246
+ K +K+KT K G LK ++ E+ + +E ++ + +K++ K+ + + Y
Sbjct: 179 ILKETKMKT----EKIQG----LLKYID-ERLQTLENEKEDLKEYQKLDKTKRSVEYTMY 229
Query: 247 DMKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSL 301
D E I N + + E A L D KKL SL
Sbjct: 230 DNTNKEAIKEKTKLDEQKVELNQKDNNV---KSQLNDVIAEMAKLKTDKKKLESL 281
Score = 127 (49.8 bits), Expect = 2.3e-11, Sum P(3) = 2.3e-11
Identities = 83/371 (22%), Positives = 155/371 (41%)
Query: 658 QKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKED-DINTALAKLVDQAADLNIQQ 716
+K+ I+ +Q + K + ++ +I+ + +EK+ D K+ A + ++Q
Sbjct: 881 RKQLATAISELQDYETKEKALQINIDNVLEQQRDLEKQQADFQLQYDKIT--AKEDEVKQ 938
Query: 717 FKYAIEIKNLLVEIVSCKWSYAEKHMASIEF-DAKIRELEFNLKQHEKLALQA-SLHYED 774
K +K L++ S K K+ S E D++ + +H KL + L Y
Sbjct: 939 -KREDSLKKLILSRYSIK---TRKNQFSYEISDSEEVGAKREPIEHRKLKISTFCLEYR- 993
Query: 775 CKKEVEHCRKHLSDAKRQAESIAF--ITP-ELEKEFLEMPTTIEELEAAIQDNISQANSI 831
K E H L A + + P ELEK+ LE + EL+ +N+
Sbjct: 994 AKLEKVHSNMRLLGALPTDTFSKWQNVKPRELEKKLLEC---VNELKK--YENV------ 1042
Query: 832 FFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEI-DALKEKWLPTLRNLVAQINE 890
N+ L +Y Q E+L TK+ A++K+ + + E+ L+ + + Q+ +
Sbjct: 1043 ---NKKALDQYMTASSQKEEL-TKRMAEQKKSEDSIEELLKVLENRKYEAIDLTFKQVKK 1098
Query: 891 TFSRNFQEMAVAGEVSL--------DEHE--SDFDKF-GILIKVKF-RQSGQLEVLSAHH 938
F + F+++ G + D+ E + + + GI + V F G E
Sbjct: 1099 NFEQVFKQLVPHGRGKMQMRAREQRDDEEGINSVELYEGISVLVSFVSDDGDSETREMTQ 1158
Query: 939 QSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTPQCF 998
SGG++S+ + + S+Q PF + DEI+ +D RK ++++ S
Sbjct: 1159 LSGGQKSLVALAIIFSIQKCDPAPFYLFDEIDAALDA-QHRKSVADMIQSLSDQAQFVTT 1217
Query: 999 LLTPKLLPDLE 1009
P+LL E
Sbjct: 1218 TFRPELLATAE 1228
Score = 81 (33.6 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 52/252 (20%), Positives = 121/252 (48%)
Query: 643 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTAL 702
++T+++ +E L++++E + Q E+ K +E + L K +++S+ +E NT
Sbjct: 271 LKTDKKKLESLGRGLREDKETL----QAEETKM--VEEKMTL-KLEIDSLNEE---NTR- 319
Query: 703 AKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAE--KHMASIEFDAKI---RELEFN 757
+ Q A+ ++Q I KN E+ + K YA+ + + ++ D +I R E
Sbjct: 320 ERQGRQNAEHSLQGVGDEI-FKNE-EELDTIKPEYAKLLEEESRLKTDIRIDESRAKEIL 377
Query: 758 LKQHEKLALQASLHYED--CKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIE 815
KQ ++ +S+ D + E+ ++D K + E+I ++E+E ++ I+
Sbjct: 378 AKQGQRSQF-SSVDDRDKFLRNEIRRISGLIADNKEREETIQKELADVEREDEKLNNEIQ 436
Query: 816 ELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKE 875
+ I +N + ++ + ++ QEY+ + + +++A + ++ +I A +
Sbjct: 437 SISRTIDENRYEMDTFAAKSTSLKQEYDAAYVAQQTAAREEKAIRDKIGNTEQDISAAND 496
Query: 876 KWLPTLRNLVAQ 887
+ LR +VA+
Sbjct: 497 Q----LRRIVAR 504
Score = 79 (32.9 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 38/218 (17%), Positives = 88/218 (40%)
Query: 669 QIEKRKRREMENHINLRKR--------KLESIEKEDDINTALAKLVDQAA-DLNIQQFKY 719
++ ++R++ N+ N R + + + K N + + +DQAA DL + F
Sbjct: 596 RVSAPRQRDLSNNSNARPMSDVIDYEVQYDKVFKSITANVIIVRTLDQAARDLRNEGFDV 655
Query: 720 A------IEIKNLLVE-IVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHY 772
+ K ++ + K S E H F ++ EL+ +L + EK+ + +
Sbjct: 656 VSVDGDQMSKKGVMTGGFIDKKRSKLELHTQKDRFTKELAELQKSLAEAEKMVRERTQEA 715
Query: 773 EDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIF 832
E + ++ + D R+ + + ++F + +T E + + + +
Sbjct: 716 EKIRNRMQQHENQIGDFHRKHRELTEAKNAISQQFYMVTSTKEPKKDQLLGIKNHLRELL 775
Query: 833 FLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEI 870
+N QE L++ +E K+L++ + E+
Sbjct: 776 AQKENFEQEIGSNMSS--QLTSDEEQTVKKLRKKVDEM 811
Score = 67 (28.6 bits), Expect = 2.3e-05, Sum P(3) = 2.3e-05
Identities = 62/302 (20%), Positives = 119/302 (39%)
Query: 656 KLQKEREEII-NIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAADLNI 714
+ KE E+ ++ + EK R + +R R + + D + +L + A +
Sbjct: 689 RFTKELAELQKSLAEAEKMVRERTQEAEKIRNRMQQHENQIGDFHRKHRELTE-AKNAIS 747
Query: 715 QQFKYAIEIKNLLVE-IVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYE 773
QQF K + ++ K H+ + + E E +L +
Sbjct: 748 QQFYMVTSTKEPKKDQLLGIK-----NHLRELLAQKENFEQEIGSNMSSQLTSDEEQTVK 802
Query: 774 DCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLE-MPTTIEELEAAIQDNISQANSIF 832
+K+V+ K L+ R+ + +E + + T E L A + D+IS
Sbjct: 803 KLRKKVDEMTKQLATVSRRRMDLMHRKNAIENLLTKKLYKTKESLTARV-DDISD----- 856
Query: 833 FLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEID--ALKEKWLP-TLRNLVAQIN 889
N+ + E+ Q+ L T+ E+ +K+L ++E+ KEK L + N++ Q
Sbjct: 857 --NER-RHKLENANAQLTSLLTRMESTRKQLATAISELQDYETKEKALQINIDNVLEQQR 913
Query: 890 --ETFSRNFQ---EMAVAGEVSLDEHESDFDKFGILIK--VKFRQSGQLEVLSAHHQSGG 942
E +FQ + A E + + D K IL + +K R++ +S + G
Sbjct: 914 DLEKQQADFQLQYDKITAKEDEVKQKREDSLKKLILSRYSIKTRKNQFSYEISDSEEVGA 973
Query: 943 ER 944
+R
Sbjct: 974 KR 975
Score = 59 (25.8 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 50/250 (20%), Positives = 105/250 (42%)
Query: 648 RLIEDEAAKLQKEREEIINIV-QIEKRKRREMENHINLRKRKLESI--EKEDDINTALAK 704
+L DE ++K R+++ + Q+ RR M+ + RK +E++ +K +L
Sbjct: 792 QLTSDEEQTVKKLRKKVDEMTKQLATVSRRRMD--LMHRKNAIENLLTKKLYKTKESLTA 849
Query: 705 LVDQAADLNIQQFKYA---IEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFN---- 757
VD +D N ++ K ++ +LL + S + A +++ K + L+ N
Sbjct: 850 RVDDISD-NERRHKLENANAQLTSLLTRMESTRKQLATAISELQDYETKEKALQINIDNV 908
Query: 758 LKQHEKLALQAS---LHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTI 814
L+Q L Q + L Y+ + + ++ D+ ++ + + +F +
Sbjct: 909 LEQQRDLEKQQADFQLQYDKITAKEDEVKQKREDSLKKLILSRYSIKTRKNQFSYEISDS 968
Query: 815 EELEAAIQ--DNISQANSIFFLNQNILQEYEHRQRQI------EDLSTKQEADKKELKRF 866
EE+ A + ++ S F L E H ++ + S Q +EL++
Sbjct: 969 EEVGAKREPIEHRKLKISTFCLEYRAKLEKVHSNMRLLGALPTDTFSKWQNVKPRELEKK 1028
Query: 867 LAE-IDALKE 875
L E ++ LK+
Sbjct: 1029 LLECVNELKK 1038
Score = 45 (20.9 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 17/55 (30%), Positives = 24/55 (43%)
Query: 369 KIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLL 423
K+EK+ S + LG K + K K L +C + LK E+ N K L
Sbjct: 995 KLEKVHSNMRLLGALPTDT-FSKWQNVKPRELEKKLL-ECVNELKKYENVNKKAL 1047
Score = 38 (18.4 bits), Expect = 2.3e-11, Sum P(3) = 2.3e-11
Identities = 11/40 (27%), Positives = 17/40 (42%)
Query: 531 SARLDQVFDAPHAVKEVLISQFGLDSSYIGSKETDQKADN 570
S L Q +DA + ++ + IG+ E D A N
Sbjct: 456 STSLKQEYDAAYVAQQTAAREEKAIRDKIGNTEQDISAAN 495
>RGD|62006 [details] [associations]
symbol:Smc3 "structural maintenance of chromosomes 3"
species:10116 "Rattus norvegicus" [GO:0000785 "chromatin"
evidence=ISO;ISS] [GO:0000800 "lateral element" evidence=ISO]
[GO:0000922 "spindle pole" evidence=ISO;ISS] [GO:0003674
"molecular_function" evidence=ND] [GO:0003682 "chromatin binding"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005604
"basement membrane" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005694 "chromosome" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISO;ISS] [GO:0006275 "regulation of DNA
replication" evidence=ISO;ISS] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0007052 "mitotic spindle organization"
evidence=ISO;ISS] [GO:0007062 "sister chromatid cohesion"
evidence=ISO] [GO:0007067 "mitosis" evidence=IEA] [GO:0007126
"meiosis" evidence=ISO;ISS] [GO:0007165 "signal transduction"
evidence=ISO;ISS] [GO:0016363 "nuclear matrix" evidence=ISO;ISS]
[GO:0019827 "stem cell maintenance" evidence=ISO] [GO:0030893
"meiotic cohesin complex" evidence=ISO;ISS] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=ISO] [GO:0034991
"nuclear meiotic cohesin complex" evidence=ISO] [GO:0036033
"mediator complex binding" evidence=ISO] [GO:0045502 "dynein
binding" evidence=ISO;ISS] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0051276 "chromosome organization"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR010935 Pfam:PF06470 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 RGD:62006 GO:GO:0005524 GO:GO:0007126 GO:GO:0005737
GO:GO:0007165 GO:GO:0051301 GO:GO:0007067 GO:GO:0007052
GO:GO:0006275 GO:GO:0006281 GO:GO:0000785 GO:GO:0016363
GO:GO:0005604 GO:GO:0000922 GO:GO:0051276 GO:GO:0045502
eggNOG:COG1196 SUPFAM:SSF75553 GO:GO:0030893 HOGENOM:HOG000166512
HOVERGEN:HBG039849 EMBL:U82626 IPI:IPI00201289 UniGene:Rn.11074
ProteinModelPortal:P97690 STRING:P97690 PhosphoSite:P97690
PRIDE:P97690 UCSC:RGD:62006 ArrayExpress:P97690
Genevestigator:P97690 GermOnline:ENSRNOG00000014173 Uniprot:P97690
Length = 1191
Score = 126 (49.4 bits), Expect = 2.4e-11, Sum P(2) = 2.4e-11
Identities = 79/386 (20%), Positives = 148/386 (38%)
Query: 23 IIEIELHNFMTF-DHLICKP-GSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI 80
I ++ + F ++ D I P S+ N+++G NGSGKS+ AI L + L R
Sbjct: 3 IKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHL-RPEQR 61
Query: 81 GAYVKRGEESGYIK--ISLRGDTKEEHLTI------MRKIDTRNKSEWFFNGKVVPKGEV 132
A + G I + + D + L I +R++ K ++F + K+V K +V
Sbjct: 62 LALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKNDV 121
Query: 133 LEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSK 192
+ + + +N + Q ++ + A + L+ + G V E S
Sbjct: 122 MNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTR---VYDERKEESISL 178
Query: 193 LKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAE 252
+K E KR + +N+L E+ +E ++ +K + M++ L + Y+ + E
Sbjct: 179 MKETEG--KR--EKINELLKYIEERLHTLEEEKEELAQYQKWDKMRRALEYTIYNQELNE 234
Query: 253 YIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCK-KLSSLINENSKRRMD 311
L + + K ++ + K K+S++ E + +
Sbjct: 235 TRAKLDELSAKRETSGEKSRQLRDAQQDARDKMEDIERQVRELKTKISAMKEEKEQLSAE 294
Query: 312 FLEKVDQGVQVQGKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPAY-EPPHDKI 370
E++ Q +++ K K +LK R Q A EP + +
Sbjct: 295 RQEQIKQRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELAETEPKFNSV 354
Query: 371 -EKLGSQILELGVQANQKRLQKSEKE 395
EK I L QA Q+R K+
Sbjct: 355 KEKEERGIARLA-QATQERTDLYAKQ 379
Score = 125 (49.1 bits), Expect = 2.4e-11, Sum P(2) = 2.4e-11
Identities = 84/365 (23%), Positives = 152/365 (41%)
Query: 643 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRRE-MENHIN-LRKRK----LESIEKE- 695
+Q + R + +E KL+ + + RKR + +E +N LR+ + L + +
Sbjct: 807 LQQKNRQLLNERIKLEGIITRVETYLNENLRKRLDQVEQELNELRETEGGTVLTATTSQL 866
Query: 696 DDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEK-HMASIEFDAKIREL 754
+ IN + + ++ DL+ K IK L + +W EK HM +I D K EL
Sbjct: 867 EAINKRVKDTMARSEDLDNSIDKTEAGIKELQKSME--RWKNMEKEHMDAINHDTK--EL 922
Query: 755 EFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDA--KRQAESIAFITPELEKEFLEMPT 812
E + + + L+ E+C K++ +A K Q S+ + +LE+ E+
Sbjct: 923 E-KMTNRQGMLLKKK---EECMKKIRELGSLPQEAFEKYQTLSLKQLFRKLEQCNTELKK 978
Query: 813 TIEELEAAIQD--NISQANSIFFLNQNILQE-YEHRQRQIEDLST-KQEADKKELKRFLA 868
+ A+ N S+ Q L Y+ + L K EA + K+
Sbjct: 979 YSHVNKKALDQFVNFSEQKEKLIKRQEELDRGYKSIMELMNVLELRKYEAIQLTFKQVSK 1038
Query: 869 EIDALKEKWLPTLR-NLVAQINETF-SRNFQEMAVAGEVSLDEHESD----FDKF-GILI 921
+ +K +P + LV + + S++ E +GE D+F G+ I
Sbjct: 1039 NFSEVFQKLVPGAKATLVMKKGDVEGSQSQDEGEGSGESERGSGSQSSVPSVDQFTGVGI 1098
Query: 922 KVKFRQSGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKM 981
+V F Q E+ SGG++S+ + + ++Q PF + DEI+Q +D RK
Sbjct: 1099 RVSFTGK-QGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFYLFDEIDQALDA-QHRKA 1156
Query: 982 FQQLV 986
++
Sbjct: 1157 VSDMI 1161
Score = 72 (30.4 bits), Expect = 6.8e-06, Sum P(2) = 6.8e-06
Identities = 68/359 (18%), Positives = 151/359 (42%)
Query: 643 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEK-----EDD 697
+ + + IE + K + R+ ++ +++ K KR++ E ++R L+S+E E
Sbjct: 714 LMNQMQQIETQQRKFKASRDSTLSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMEST 773
Query: 698 INTALAKL-VDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEF 756
+ A+L D + L+++ K + L EI + + I+ + I +E
Sbjct: 774 RESLKAELGTDLPSQLSLEDQK---RVDALNDEIRQLQQKNRQLLNERIKLEGIITRVET 830
Query: 757 NLKQHEKLAL-QASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIE 815
L ++ + L Q + + E E L+ Q E+I + ++ +I+
Sbjct: 831 YLNENLRKRLDQVEQELNELR-ETEGGTV-LTATTSQLEAINKRVKDTMARSEDLDNSID 888
Query: 816 ELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKE 875
+ EA I++ + + + H +++E ++ +Q LK+ KE
Sbjct: 889 KTEAGIKELQKSMERWKNMEKEHMDAINHDTKELEKMTNRQGM---LLKK--------KE 937
Query: 876 KWLPTLRNLVAQINETFSRNFQEMAVAGEV-SLDEHESDFDKFGILIKVKFRQ----SGQ 930
+ + +R L + E F + +Q +++ L++ ++ K+ + K Q S Q
Sbjct: 938 ECMKKIRELGSLPQEAFEK-YQTLSLKQLFRKLEQCNTELKKYSHVNKKALDQFVNFSEQ 996
Query: 931 LEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAA 989
E L Q +R +I+ L+++ +L + + + + N ++FQ+LV A
Sbjct: 997 KEKL-IKRQEELDRGYKSIMELMNVLELRK--YEAIQLTFKQVSK-NFSEVFQKLVPGA 1051
Score = 70 (29.7 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 21/75 (28%), Positives = 38/75 (50%)
Query: 802 ELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKK 861
EL+K+ + + ELEA + +N+ + +I + I E + Q++ + T+Q K
Sbjct: 677 ELQKDVRKAEEELGELEAKLNENLRR--NI----ERINNEIDQLMNQMQQIETQQRKFKA 730
Query: 862 ELKRFLAEIDALKEK 876
L+E+ LKEK
Sbjct: 731 SRDSTLSEMKMLKEK 745
Score = 60 (26.2 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 37/155 (23%), Positives = 62/155 (40%)
Query: 362 AYEPPHDKIEKLGSQILEL-----GVQANQKRLQKSEKEKILNQNKLTLR--QCSDRLKD 414
A + DK+E + Q+ EL ++ +++L +E+I + KL L+ D L
Sbjct: 259 AQQDARDKMEDIERQVRELKTKISAMKEEKEQLSAERQEQIKQRTKLELKAKDLQDELAG 318
Query: 415 MEDKNNKLLHALRNSGAENIFEAYCWLQQHRHELN----KEAYGPVLLEVNVSNRAHANY 470
++ +LL R E I E L + + N KE G L R Y
Sbjct: 319 NSEQRKRLLKE-RQKLLEKIEEKQKELAETEPKFNSVKEKEERGIARLAQATQERTDL-Y 376
Query: 471 LEDHVGHYIWKSFITQDAGDRDFLAKNLKPFDVPI 505
+ G F +++ D+ ++ K LK D I
Sbjct: 377 AKQGRG----SQFTSKEERDK-WIKKELKSLDQAI 406
>UNIPROTKB|P97690 [details] [associations]
symbol:Smc3 "Structural maintenance of chromosomes protein
3" species:10116 "Rattus norvegicus" [GO:0051276 "chromosome
organization" evidence=IEA] InterPro:IPR010935 Pfam:PF06470
SMART:SM00968 InterPro:IPR003395 Pfam:PF02463 RGD:62006
GO:GO:0005524 GO:GO:0007126 GO:GO:0005737 GO:GO:0007165
GO:GO:0051301 GO:GO:0007067 GO:GO:0007052 GO:GO:0006275
GO:GO:0006281 GO:GO:0000785 GO:GO:0016363 GO:GO:0005604
GO:GO:0000922 GO:GO:0051276 GO:GO:0045502 eggNOG:COG1196
SUPFAM:SSF75553 GO:GO:0030893 HOGENOM:HOG000166512
HOVERGEN:HBG039849 EMBL:U82626 IPI:IPI00201289 UniGene:Rn.11074
ProteinModelPortal:P97690 STRING:P97690 PhosphoSite:P97690
PRIDE:P97690 UCSC:RGD:62006 ArrayExpress:P97690
Genevestigator:P97690 GermOnline:ENSRNOG00000014173 Uniprot:P97690
Length = 1191
Score = 126 (49.4 bits), Expect = 2.4e-11, Sum P(2) = 2.4e-11
Identities = 79/386 (20%), Positives = 148/386 (38%)
Query: 23 IIEIELHNFMTF-DHLICKP-GSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI 80
I ++ + F ++ D I P S+ N+++G NGSGKS+ AI L + L R
Sbjct: 3 IKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHL-RPEQR 61
Query: 81 GAYVKRGEESGYIK--ISLRGDTKEEHLTI------MRKIDTRNKSEWFFNGKVVPKGEV 132
A + G I + + D + L I +R++ K ++F + K+V K +V
Sbjct: 62 LALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKNDV 121
Query: 133 LEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSK 192
+ + + +N + Q ++ + A + L+ + G V E S
Sbjct: 122 MNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTR---VYDERKEESISL 178
Query: 193 LKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAE 252
+K E KR + +N+L E+ +E ++ +K + M++ L + Y+ + E
Sbjct: 179 MKETEG--KR--EKINELLKYIEERLHTLEEEKEELAQYQKWDKMRRALEYTIYNQELNE 234
Query: 253 YIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCK-KLSSLINENSKRRMD 311
L + + K ++ + K K+S++ E + +
Sbjct: 235 TRAKLDELSAKRETSGEKSRQLRDAQQDARDKMEDIERQVRELKTKISAMKEEKEQLSAE 294
Query: 312 FLEKVDQGVQVQGKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPAY-EPPHDKI 370
E++ Q +++ K K +LK R Q A EP + +
Sbjct: 295 RQEQIKQRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELAETEPKFNSV 354
Query: 371 -EKLGSQILELGVQANQKRLQKSEKE 395
EK I L QA Q+R K+
Sbjct: 355 KEKEERGIARLA-QATQERTDLYAKQ 379
Score = 125 (49.1 bits), Expect = 2.4e-11, Sum P(2) = 2.4e-11
Identities = 84/365 (23%), Positives = 152/365 (41%)
Query: 643 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRRE-MENHIN-LRKRK----LESIEKE- 695
+Q + R + +E KL+ + + RKR + +E +N LR+ + L + +
Sbjct: 807 LQQKNRQLLNERIKLEGIITRVETYLNENLRKRLDQVEQELNELRETEGGTVLTATTSQL 866
Query: 696 DDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEK-HMASIEFDAKIREL 754
+ IN + + ++ DL+ K IK L + +W EK HM +I D K EL
Sbjct: 867 EAINKRVKDTMARSEDLDNSIDKTEAGIKELQKSME--RWKNMEKEHMDAINHDTK--EL 922
Query: 755 EFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDA--KRQAESIAFITPELEKEFLEMPT 812
E + + + L+ E+C K++ +A K Q S+ + +LE+ E+
Sbjct: 923 E-KMTNRQGMLLKKK---EECMKKIRELGSLPQEAFEKYQTLSLKQLFRKLEQCNTELKK 978
Query: 813 TIEELEAAIQD--NISQANSIFFLNQNILQE-YEHRQRQIEDLST-KQEADKKELKRFLA 868
+ A+ N S+ Q L Y+ + L K EA + K+
Sbjct: 979 YSHVNKKALDQFVNFSEQKEKLIKRQEELDRGYKSIMELMNVLELRKYEAIQLTFKQVSK 1038
Query: 869 EIDALKEKWLPTLR-NLVAQINETF-SRNFQEMAVAGEVSLDEHESD----FDKF-GILI 921
+ +K +P + LV + + S++ E +GE D+F G+ I
Sbjct: 1039 NFSEVFQKLVPGAKATLVMKKGDVEGSQSQDEGEGSGESERGSGSQSSVPSVDQFTGVGI 1098
Query: 922 KVKFRQSGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKM 981
+V F Q E+ SGG++S+ + + ++Q PF + DEI+Q +D RK
Sbjct: 1099 RVSFTGK-QGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFYLFDEIDQALDA-QHRKA 1156
Query: 982 FQQLV 986
++
Sbjct: 1157 VSDMI 1161
Score = 72 (30.4 bits), Expect = 6.8e-06, Sum P(2) = 6.8e-06
Identities = 68/359 (18%), Positives = 151/359 (42%)
Query: 643 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEK-----EDD 697
+ + + IE + K + R+ ++ +++ K KR++ E ++R L+S+E E
Sbjct: 714 LMNQMQQIETQQRKFKASRDSTLSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMEST 773
Query: 698 INTALAKL-VDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEF 756
+ A+L D + L+++ K + L EI + + I+ + I +E
Sbjct: 774 RESLKAELGTDLPSQLSLEDQK---RVDALNDEIRQLQQKNRQLLNERIKLEGIITRVET 830
Query: 757 NLKQHEKLAL-QASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIE 815
L ++ + L Q + + E E L+ Q E+I + ++ +I+
Sbjct: 831 YLNENLRKRLDQVEQELNELR-ETEGGTV-LTATTSQLEAINKRVKDTMARSEDLDNSID 888
Query: 816 ELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKE 875
+ EA I++ + + + H +++E ++ +Q LK+ KE
Sbjct: 889 KTEAGIKELQKSMERWKNMEKEHMDAINHDTKELEKMTNRQGM---LLKK--------KE 937
Query: 876 KWLPTLRNLVAQINETFSRNFQEMAVAGEV-SLDEHESDFDKFGILIKVKFRQ----SGQ 930
+ + +R L + E F + +Q +++ L++ ++ K+ + K Q S Q
Sbjct: 938 ECMKKIRELGSLPQEAFEK-YQTLSLKQLFRKLEQCNTELKKYSHVNKKALDQFVNFSEQ 996
Query: 931 LEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAA 989
E L Q +R +I+ L+++ +L + + + + N ++FQ+LV A
Sbjct: 997 KEKL-IKRQEELDRGYKSIMELMNVLELRK--YEAIQLTFKQVSK-NFSEVFQKLVPGA 1051
Score = 70 (29.7 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 21/75 (28%), Positives = 38/75 (50%)
Query: 802 ELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKK 861
EL+K+ + + ELEA + +N+ + +I + I E + Q++ + T+Q K
Sbjct: 677 ELQKDVRKAEEELGELEAKLNENLRR--NI----ERINNEIDQLMNQMQQIETQQRKFKA 730
Query: 862 ELKRFLAEIDALKEK 876
L+E+ LKEK
Sbjct: 731 SRDSTLSEMKMLKEK 745
Score = 60 (26.2 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 37/155 (23%), Positives = 62/155 (40%)
Query: 362 AYEPPHDKIEKLGSQILEL-----GVQANQKRLQKSEKEKILNQNKLTLR--QCSDRLKD 414
A + DK+E + Q+ EL ++ +++L +E+I + KL L+ D L
Sbjct: 259 AQQDARDKMEDIERQVRELKTKISAMKEEKEQLSAERQEQIKQRTKLELKAKDLQDELAG 318
Query: 415 MEDKNNKLLHALRNSGAENIFEAYCWLQQHRHELN----KEAYGPVLLEVNVSNRAHANY 470
++ +LL R E I E L + + N KE G L R Y
Sbjct: 319 NSEQRKRLLKE-RQKLLEKIEEKQKELAETEPKFNSVKEKEERGIARLAQATQERTDL-Y 376
Query: 471 LEDHVGHYIWKSFITQDAGDRDFLAKNLKPFDVPI 505
+ G F +++ D+ ++ K LK D I
Sbjct: 377 AKQGRG----SQFTSKEERDK-WIKKELKSLDQAI 406
>ASPGD|ASPL0000004872 [details] [associations]
symbol:smcB species:162425 "Emericella nidulans"
[GO:0007076 "mitotic chromosome condensation" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000796 "condensin
complex" evidence=IEA] [GO:0000939 "condensed chromosome inner
kinetochore" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR024704
InterPro:IPR010935 InterPro:IPR027120 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0005634 GO:GO:0005694 GO:GO:0006281
EMBL:BN001301 GO:GO:0006310 GO:GO:0030261 EMBL:AACD01000101
GO:GO:0007062 eggNOG:COG1196 SUPFAM:SSF75553 KO:K06674
PANTHER:PTHR18937:SF9 HOGENOM:HOG000163792 OMA:CQNGKIP
OrthoDB:EOG4P2T9B RefSeq:XP_663503.1 ProteinModelPortal:Q5B0N1
STRING:Q5B0N1 EnsemblFungi:CADANIAT00007134 GeneID:2870708
KEGG:ani:AN5899.2 Uniprot:Q5B0N1
Length = 1179
Score = 132 (51.5 bits), Expect = 4.7e-11, Sum P(3) = 4.7e-11
Identities = 75/349 (21%), Positives = 151/349 (43%)
Query: 655 AKLQKEREEIINIVQIEKRKR-REMEN-HINLRKRKLESIEKEDDINTALAKLVDQAADL 712
+KL+ E + +N ++ K ++N H L+ +LES + D++ A + + + L
Sbjct: 791 SKLE-ELQTTLNALKKSLSKNLTSVKNLHKELQASRLESEQVGSDLSAAEEQYAESESTL 849
Query: 713 NIQQFKYAIEIKNLLVEIVSCKWSY--AEKHM----ASIE-FDAKIRELEFNLKQHEKLA 765
Q E+ +L E K ++ A+ H+ A + FD ++R+LE ++
Sbjct: 850 KAQ----LEEVDSLKREQARIKDAHDIAQAHLDDERAKLTGFDDELRDLEQTMQSKNSQI 905
Query: 766 LQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELE-----KEFLEMPTTIEELEAA 820
+ L + ++E +K +A QA +A + E E K+ P T+ + +
Sbjct: 906 TEEGLEMQKLGHQLEKLQKE-QNAAEQA--VAHLEAEHEWIADEKDNFGRPNTVYDFK-- 960
Query: 821 IQDNISQANSIFFLNQNILQEYEHRQRQIED--LSTKQEADKKE--LKRFLAEIDALKEK 876
NI++ + +N+ + ++ +++I ++ +KKE LK + + K K
Sbjct: 961 -NQNIAECKATL---RNVTERFQGMKKKINPKVMNMIDSVEKKEAALKNMMRTVIRDKSK 1016
Query: 877 WLPTLRNLV-----------AQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKF 925
T+ NL ++N F + F E+ LD E G+ +KV
Sbjct: 1017 IEETIINLNEYKKEALHKTWTKVNADFGQIFSELLPGSFAKLDPPEGKDITDGLEVKVSL 1076
Query: 926 RQSGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMD 974
G++ S SGG+RS+ + +++L P ++DE++ +D
Sbjct: 1077 ---GKVWKQSLTELSGGQRSLIALSLIMALLQFKPAPMYILDEVDAALD 1122
Score = 114 (45.2 bits), Expect = 4.7e-11, Sum P(3) = 4.7e-11
Identities = 51/195 (26%), Positives = 89/195 (45%)
Query: 46 NLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSIGAYV-KRGEESGYIKISL-----RG 99
N + G NGSGKS+++ AI LG RA ++ + KRG+ +G K S+
Sbjct: 28 NSITGLNGSGKSNILDAICFVLGITNMSTVRAQNLQDLIYKRGQ-AGVTKASVTIVFDNR 86
Query: 100 DTK------EEHLTIM--RKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQFLP 151
DT EE+ TI R+I S++ NG + V + + + +NN +
Sbjct: 87 DTAKSPIGFEEYATISVTRQIVLGGTSKYLINGHRAQQQTVQNLFQSVQLNINNPNFLIM 146
Query: 152 QDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLK 211
Q R+ + + V++L E+A G + EK++K T+ + L +++
Sbjct: 147 QGRITKVLNMKAVEILSMIEEAAGTRMFEDRR----EKAAK------TMAKKDLKLQEIE 196
Query: 212 ALNVEQ-EKDVERVR 225
L E+ E +E++R
Sbjct: 197 GLLKEEIEPKLEKLR 211
Score = 93 (37.8 bits), Expect = 8.6e-07, Sum P(2) = 8.6e-07
Identities = 44/215 (20%), Positives = 94/215 (43%)
Query: 669 QIEKRKRREMENHINLRKRKLESIEKEDDINTALA---KLVDQAADLNI--QQFK-YAIE 722
+ EK+KR+ N K K E E+D+ A K + + + K ++ E
Sbjct: 252 ECEKKKRKIQALEDNTAKLKSEIAHMEEDVKRVKAVRDKELRKGGKFQALEDEVKAHSHE 311
Query: 723 IKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYEDCKKEVEHC 782
+ L K S AE+ S E +++LE +LK+ +K+ + Y+ K E++
Sbjct: 312 LVRLTTVFDLKKASIAEEKEKSKELQKSVKDLETSLKEKKKIYDKLQAEYDAAKAELD-- 369
Query: 783 RKHLSDAKRQAESIAFI-TPELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQE 841
++ +++ E + + T KE E + +QD ++A++ + +
Sbjct: 370 -AQTAEVEQKEELLQTLQTGVASKEGQE-----SGYQGQLQDARNRASNAATEQEQAKLK 423
Query: 842 YEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEK 876
H +++I++ + + K++ L E++ LK +
Sbjct: 424 IAHLEKRIKEEEPRAKKAKEQNSGLLKELEGLKSQ 458
Score = 91 (37.1 bits), Expect = 7.2e-07, Sum P(3) = 7.2e-07
Identities = 41/145 (28%), Positives = 75/145 (51%)
Query: 746 EFDAKIRELEFNLKQHEKLALQASLH-YEDCKKEVEHCRKHLSDAK-RQAESIAFITPEL 803
E D K E++ +Q + + + E+ K +E ++++SDAK RQ+E+ I +
Sbjct: 720 ELDLKNHEIKLTEEQIGGNSSSSIIQAVEEMKANIEQLKQNISDAKLRQSEASKDIK-RI 778
Query: 804 EKEFLEM----PTTIEELEA---AIQDNISQ-ANSIFFLNQNILQEYEHRQRQI-EDLST 854
EK+ E + +EEL+ A++ ++S+ S+ L++ LQ Q+ DLS
Sbjct: 779 EKDMREFNNNKDSKLEELQTTLNALKKSLSKNLTSVKNLHKE-LQASRLESEQVGSDLSA 837
Query: 855 KQE--ADKKE-LKRFLAEIDALKEK 876
+E A+ + LK L E+D+LK +
Sbjct: 838 AEEQYAESESTLKAQLEEVDSLKRE 862
Score = 71 (30.1 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 56/278 (20%), Positives = 120/278 (43%)
Query: 650 IEDEAAKLQKE----REEIINIVQIEKRKRRE------MENHINLRKRKLESIEKEDDIN 699
+ED AKL+ E E++ + + ++ R+ +E+ + +L + D+
Sbjct: 263 LEDNTAKLKSEIAHMEEDVKRVKAVRDKELRKGGKFQALEDEVKAHSHELVRLTTVFDLK 322
Query: 700 TA-LAKLVDQAADL--NIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEF 756
A +A+ +++ +L +++ + +++ K + + + AE A E DA+ E+E
Sbjct: 323 KASIAEEKEKSKELQKSVKDLETSLKEKKKIYDKLQ-----AEYDAAKAELDAQTAEVE- 376
Query: 757 NLKQHEKLALQASLHYEDCKKEVEHC--RKHLSDAKRQAESIAFITPELEKEFLEMPTTI 814
Q E+L LQ +L KE + + L DA+ +A + A + + + + I
Sbjct: 377 ---QKEEL-LQ-TLQTGVASKEGQESGYQGQLQDARNRASNAATEQEQAKLKIAHLEKRI 431
Query: 815 EELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLST---KQEADKKELKRFLAEID 871
+E E + Q + + + + + + + ++ L ++E +E EI
Sbjct: 432 KEEEPRAKKAKEQNSGLLKELEGLKSQAKKLEYELSKLGFEPGREEQLYQEQSGLQKEIR 491
Query: 872 ALKEKWLPTLRNLVAQINETFSR---NFQEMAVAGEVS 906
L+++ L+ VA I +S NF V G V+
Sbjct: 492 ELRQR-ADGLQRKVANIEFNYSDPYPNFDRSKVKGLVA 528
Score = 55 (24.4 bits), Expect = 8.6e-05, Sum P(2) = 8.6e-05
Identities = 18/70 (25%), Positives = 34/70 (48%)
Query: 187 VEKSSKLKTIECTVKRNGDTLNQLKAL-NVEQEKDVERVRQRAELLEKVESMKKKLPWLK 245
+ K K + +E VK + L +L + ++++ E + EL + V+ ++ L K
Sbjct: 292 LRKGGKFQALEDEVKAHSHELVRLTTVFDLKKASIAEEKEKSKELQKSVKDLETSLKEKK 351
Query: 246 --YDMKKAEY 253
YD +AEY
Sbjct: 352 KIYDKLQAEY 361
Score = 50 (22.7 bits), Expect = 4.7e-11, Sum P(3) = 4.7e-11
Identities = 10/40 (25%), Positives = 23/40 (57%)
Query: 211 KALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKK 250
K + E+ + + Q + LL+++E +K + L+Y++ K
Sbjct: 429 KRIKEEEPRAKKAKEQNSGLLKELEGLKSQAKKLEYELSK 468
Score = 46 (21.3 bits), Expect = 1.2e-10, Sum P(3) = 1.2e-10
Identities = 15/46 (32%), Positives = 22/46 (47%)
Query: 209 QLKALNVEQEKDVERVRQRAELLEKVES-MKKKLPWLKYDMKKAEY 253
Q K EK ++ RA+ ++ S + K+L LK KK EY
Sbjct: 419 QAKLKIAHLEKRIKEEEPRAKKAKEQNSGLLKELEGLKSQAKKLEY 464
>UNIPROTKB|E1C611 [details] [associations]
symbol:E1C611 "Structural maintenance of chromosomes
protein" species:9031 "Gallus gallus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0000228 "nuclear chromosome"
evidence=IEA] [GO:0000796 "condensin complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0007076 "mitotic
chromosome condensation" evidence=IEA] [GO:0010032 "meiotic
chromosome condensation" evidence=IEA] [GO:0045132 "meiotic
chromosome segregation" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0051383 "kinetochore
organization" evidence=IEA] InterPro:IPR024704 InterPro:IPR010935
InterPro:IPR027120 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0005737
GO:GO:0006281 GO:GO:0006310 GO:GO:0007076 GO:GO:0000228
GO:GO:0000796 GO:GO:0007062 SUPFAM:SSF75553
GeneTree:ENSGT00550000074857 PANTHER:PTHR18937:SF9
EMBL:AADN02057751 EMBL:AADN02057752 EMBL:AADN02057753
EMBL:AADN02057754 EMBL:AADN02057755 IPI:IPI00818627
Ensembl:ENSGALT00000037610 ArrayExpress:E1C611 Uniprot:E1C611
Length = 1192
Score = 127 (49.8 bits), Expect = 5.1e-11, Sum P(3) = 5.1e-11
Identities = 75/347 (21%), Positives = 145/347 (41%)
Query: 650 IEDEAAKLQKEREEIINIVQIEKRKRREMENHI-NLRKRKLESI---EKEDDINTALAKL 705
I++ KL +++ + + K K++E+E + L + K E ++ + A+A L
Sbjct: 795 IKNAQQKLNSAKKKADDSSRKMKEKQQEVEALVLELEQLKQEQASYKQQSEAAQQAIASL 854
Query: 706 VDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLA 765
+Q + L + K +KN E+ S K AE+ AKI + H
Sbjct: 855 KEQVSALEAEAVKTRESLKNAENELSSEKGLMAERTKDIKAKSAKIEKYREQNNIHRNYF 914
Query: 766 LQASLHYEDCKKE---VEHCRKHLSDAKRQA-ESIAFITPELEKEF-LEMPT-TIEELEA 819
+ +E +K ++ K L + K A E F + +F P T ++L+
Sbjct: 915 KEGD-QWEKKQKHSDVMDKLDKLLKEYKWIASEKELFGQADTTYDFEANNPKETGQKLQK 973
Query: 820 AIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLP 879
+ S+ N+L E E +R+ DL K+ + + + LA I+ L K
Sbjct: 974 LLTKKEKLEKSLNMRAMNLLSEAE--ERKYNDLMKKKRIVENDKIKILATIEELDRKKNK 1031
Query: 880 TLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQS-GQLEVLSAHH 938
L ++N+ F F + + L + K IL ++FR G + +
Sbjct: 1032 ALHIAWEKVNKDFGSIFSMLLPGAKAMLVPSK----KQNILDGLEFRVGLGDIWKENLTE 1087
Query: 939 QSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQL 985
SGG+RS++ + ++++ P ++DE++ +D + + + Q L
Sbjct: 1088 LSGGQRSLAALSLILAILLFKPAPIYILDEVDAALDLSHTQNIGQML 1134
Score = 118 (46.6 bits), Expect = 5.1e-11, Sum P(3) = 5.1e-11
Identities = 52/226 (23%), Positives = 104/226 (46%)
Query: 46 NLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSIGAYVKRGEESGYIK--ISLRGDTKE 103
N + G NGSGKS+++ +I LG RA+S+ V + ++G K +S+ D +
Sbjct: 28 NAITGLNGSGKSNILDSICFLLGISNLSQVRASSLQDLVYKNGQAGVNKATVSITFDNSD 87
Query: 104 -----------EHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQFL-- 150
+ +TI R++ ++++ NG V ++ + VNN FL
Sbjct: 88 KKNSPLGFENNDEITITRQVIVGGRNKYLINGMNASNNRVQDLFGSVGLNVNN-PHFLIM 146
Query: 151 PQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQL 210
Q ++ + + P ++L E+A G + C K + KTIE + L+++
Sbjct: 147 QQGQITKVLNMKPTEILAMIEEAAGTR---MYECM---KITAHKTIE----KKESKLDEI 196
Query: 211 KALNVEQ-EKDVERVRQ-RAELLEKVESMKKKLPWLKYDMKKAEYI 254
+ + E+ +E++++ RA LE + M +++ L+ +Y+
Sbjct: 197 RRIITEEISPTLEKLKEARASYLE-YQKMTREVENLRRIYVAFQYV 241
Score = 81 (33.6 bits), Expect = 2.0e-06, Sum P(4) = 2.0e-06
Identities = 51/217 (23%), Positives = 93/217 (42%)
Query: 676 REMENHINLRKRKLESIEKEDDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKW 735
R+ E+ + ++ +LE+ EKE LA L + A Q K E+K+ E++ K
Sbjct: 686 RDAEDELKIKTSQLEATEKE------LANLKNMAE--KYQHLKQQWEMKSEEAELLQTKI 737
Query: 736 SYAEKHMASIEFDA---KIRELEFNLKQHEKLALQASLHYEDCK-----------KEVEH 781
+ H + A I E E LK+ E+ +A Y+ + KE+++
Sbjct: 738 QQSAYHKQQEDLLALKKTIAECEETLKKTEESQRKAEEEYKALENKMKNAEAERGKEIKN 797
Query: 782 CRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQE 841
++ L+ AK++A+ + +++++ E+ + ELE Q+ S Q I
Sbjct: 798 AQQKLNSAKKKADDSS---RKMKEKQQEVEALVLELEQLKQEQASYKQQSEAAQQAIASL 854
Query: 842 YEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWL 878
E Q+ L + ++ LK AE + EK L
Sbjct: 855 KE----QVSALEAEAVKTRESLKN--AENELSSEKGL 885
Score = 66 (28.3 bits), Expect = 2.6e-05, Sum P(3) = 2.6e-05
Identities = 19/69 (27%), Positives = 34/69 (49%)
Query: 188 EKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAE----LLEKVESMKKKLPW 243
E + I T ++ D + +LK EQE + + +Q + L E ES++ K P+
Sbjct: 450 EDQEAFEAIRKTKEKLQDEMKKLKYEEAEQEAHLAKKKQLSSEISSLRELCESIEAKHPY 509
Query: 244 LKYDMKKAE 252
L+++ K E
Sbjct: 510 LRFEYKNPE 518
Score = 57 (25.1 bits), Expect = 0.00020, Sum P(3) = 0.00020
Identities = 25/101 (24%), Positives = 45/101 (44%)
Query: 152 QDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLK 211
Q + F LSPV L+ + A+ + C ++ KLK + +K + ++
Sbjct: 391 QKSLTHFMLLSPVSLVLRAKAAICHS---CKQC--LQAQMKLKYAQQELKTKQAEVKKMD 445
Query: 212 ALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAE 252
E ++ E +R+ E L+ + MKK LKY+ + E
Sbjct: 446 GSYKEDQEAFEAIRKTKEKLQ--DEMKK----LKYEEAEQE 480
Score = 52 (23.4 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 37/155 (23%), Positives = 67/155 (43%)
Query: 105 HLT-IMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLT---QFLPQ--DRVCEF 158
H+T I+ K+ T +E ++ K LE T++ + N+ Q L Q + E
Sbjct: 674 HVTPILSKLKTMRDAE----DELKIKTSQLEATEKELANLKNMAEKYQHLKQQWEMKSEE 729
Query: 159 AKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKAL-NVEQ 217
A+L K+ + + L ++ + E LK E + +R + + KAL N +
Sbjct: 730 AELLQTKIQQSAYHKQQEDLLALKK-TIAECEETLKKTEES-QRKAE--EEYKALENKMK 785
Query: 218 EKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAE 252
+ ER ++ +K+ S KKK MK+ +
Sbjct: 786 NAEAERGKEIKNAQQKLNSAKKKADDSSRKMKEKQ 820
Score = 51 (23.0 bits), Expect = 5.1e-11, Sum P(3) = 5.1e-11
Identities = 12/40 (30%), Positives = 27/40 (67%)
Query: 383 QANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKL 422
QAN+K++ +S E N+ K+ ++ + ++++ E KNN++
Sbjct: 258 QANKKKIFESMAE---NEKKV--KELAQQIEETEKKNNEV 292
Score = 46 (21.3 bits), Expect = 1.6e-10, Sum P(3) = 1.6e-10
Identities = 13/47 (27%), Positives = 25/47 (53%)
Query: 375 SQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNK 421
+++L+ +Q Q K ++E +L K T+ +C + LK E+ K
Sbjct: 730 AELLQTKIQ--QSAYHK-QQEDLLALKK-TIAECEETLKKTEESQRK 772
Score = 44 (20.5 bits), Expect = 2.0e-06, Sum P(4) = 2.0e-06
Identities = 14/45 (31%), Positives = 26/45 (57%)
Query: 651 EDEAA--KLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIE 693
ED+ A ++K +E++ + +++K K E E +L K+K S E
Sbjct: 450 EDQEAFEAIRKTKEKLQD--EMKKLKYEEAEQEAHLAKKKQLSSE 492
>UNIPROTKB|F1SH51 [details] [associations]
symbol:SMC4 "Structural maintenance of chromosomes protein"
species:9823 "Sus scrofa" [GO:0005634 "nucleus" evidence=IEA]
[GO:0051383 "kinetochore organization" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=IEA] [GO:0045132
"meiotic chromosome segregation" evidence=IEA] [GO:0010032 "meiotic
chromosome condensation" evidence=IEA] [GO:0007076 "mitotic
chromosome condensation" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0000796 "condensin complex" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0006281
GO:GO:0006310 GO:GO:0007076 GO:GO:0000796 GO:GO:0007062
GeneTree:ENSGT00580000081617 KO:K06675 SUPFAM:SSF75553 OMA:IAIEFLT
CTD:10051 EMBL:CU466375 RefSeq:XP_001927540.1 UniGene:Ssc.7850
Ensembl:ENSSSCT00000012842 GeneID:100152361 KEGG:ssc:100152361
Uniprot:F1SH51
Length = 1288
Score = 147 (56.8 bits), Expect = 5.2e-11, Sum P(2) = 5.2e-11
Identities = 73/344 (21%), Positives = 156/344 (45%)
Query: 651 EDEAAKLQKEREEIINIV---QIE----KRKRREMENHINLRKRKLESIEKE-DDINTAL 702
+D+ K+ K+ +E + + Q+ R ++ ++ + +++++ EKE DD+ T L
Sbjct: 903 QDKLDKINKQLDECASAITKAQVAIKTADRNLKKAQDSVFRTEKEIKDTEKEVDDLTTEL 962
Query: 703 AKLVDQAADL--NIQQFKYAI-EI----KNLLVEIVSCKWSYAEKHMASIEFDAKIRELE 755
L D+AA++ N + ++ EI ++LL E+ + + ++ K+ +++
Sbjct: 963 KSLEDKAAEVIKNTNAAEESLPEIQKEHRSLLQELKVIQENEHALQKDALSIKLKLEQID 1022
Query: 756 FNLKQHEKLALQASLHYEDCKKEVEHCRKH-LSDAKRQAESIAFITPELEKEFLEMPTTI 814
++ +H + + Y +KE+ H + D E IA +TPE + E ++ P +I
Sbjct: 1023 GHIGEHN-----SKIKY--WQKEISKISLHPIED--NPVEEIAVLTPE-DLEAIKNPDSI 1072
Query: 815 EELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKR--FLAEIDA 872
A ++ + N + EY+ ++ L E DK +R F +
Sbjct: 1073 TNQIALLEAQCHEMKP----NLGAIVEYKKKEELY--LQRVAELDKITYERDNFRQAYED 1126
Query: 873 LKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKF--GILIKVKFRQSGQ 930
L+++ L I N+Q + + G+ L+ +S D F GI+ V+ +
Sbjct: 1127 LRKQRLNEFMAGFYIITNKLKENYQMLTLGGDAELELVDS-LDPFAEGIMFSVRPPKKSW 1185
Query: 931 LEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMD 974
++ + SGGE+++S++ + +L P +DEI+ +D
Sbjct: 1186 KKIFNL---SGGEKTLSSLALVFALHHYKPTPLYFMDEIDAALD 1226
Score = 101 (40.6 bits), Expect = 5.2e-11, Sum P(2) = 5.2e-11
Identities = 94/426 (22%), Positives = 170/426 (39%)
Query: 23 IIEIELHNFMTF-DHLICKP-GSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI 80
I I NF ++ I P R + +IGPNGSGKS+++ ++ G Q + R+ +
Sbjct: 84 ITHIVNQNFKSYAGEKILGPFHKRFSCIIGPNGSGKSNVIDSMLFVFGYRAQKI-RSKKL 142
Query: 81 GAYVKRGEESGYIK-----------ISLRGDTKE----EHLTIMRKIDTRNKSEWFFNGK 125
+ +E I+ I G+ E + + R N S + +GK
Sbjct: 143 SVLIHNSDEHKDIQSCTVEVHFQKIIDKEGNDYEVVPNSNFYVSRTAYRDNTSVYHISGK 202
Query: 126 VVPKGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCA 185
+V + + I +++ + Q V + A + P E E + + +
Sbjct: 203 KKTFKDVGNLLRSHGIDLDHNRFLILQGEVEQIAMMKPKGQTEHDEGMLEYLEDIIGSGR 262
Query: 186 LVEKSSKL-KTIECTVKRNGDTLNQLKALNVEQEKD-VERVRQRA-ELLE-KVESMKKKL 241
L E L + +E + G+ LN++K VE+EKD +E + A E L + E +KK
Sbjct: 263 LNEPIKVLCRRVEILNEHRGEKLNRVKM--VEKEKDALEGEKNIAIEFLTLENEIFRKKN 320
Query: 242 PWLKYDMKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPI--EGKKQEKAILDGDCKKLS 299
+Y + + ++E S + E K + KA+ D + KKL+
Sbjct: 321 HVCQYYIYDLQ--KRIAEMETQKEKIHEDTKEINEKSNILSNEMKAKNKAVKDVE-KKLN 377
Query: 300 SLINENSKRRMDFLEKVD-QGVQVQGKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQ 358
+ + + F K+D + VQV+ K K KA+ +
Sbjct: 378 KITKFIEENKEKFT-KLDLEDVQVREKLKHATS-------------KAKKLEKQLQKDKE 423
Query: 359 TVPAYEPPHDKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRL-KDMED 417
V ++ K E + I E + N +K ++EK L + +L+Q + L K+ E
Sbjct: 424 KVEEFKSIPAKSENI---ITETTTRNNALEKEKEKEEKKLKEVMDSLKQETQGLQKEKES 480
Query: 418 KNNKLL 423
+ +L+
Sbjct: 481 QEKELM 486
Score = 80 (33.2 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 52/284 (18%), Positives = 129/284 (45%)
Query: 655 AKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKED-DINTALAKLVDQAADLN 713
+K+ K R +V+I + + +ME+ + +K I++ + + KL ++
Sbjct: 756 SKVMKGRMGSSVVVEISEEEVNKMESQLQRDSQKAVQIQEHKVQLEETVVKLRHSEREMR 815
Query: 714 --IQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIREL-EFNLK----QHEKLAL 766
+++F +I+ + E + + E ++ + D K ++L E N+ +++ +A
Sbjct: 816 NTLEKFTASIQRLSEQEEYLRVQVKELEANVLATAPDQKKQKLLEENVNAFKAEYDSVAE 875
Query: 767 QASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQD--- 823
+A + K+ + + +++ K +A+ ++ K+ E + I + + AI+
Sbjct: 876 KAGKVEAEVKR-LHNIIVEINNHKLKAQQDKL--DKINKQLDECASAITKAQVAIKTADR 932
Query: 824 NISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRN 883
N+ +A F + +E + +++++DL+T+ ++ + + + +A +E LP
Sbjct: 933 NLKKAQDSVFRTE---KEIKDTEKEVDDLTTELKSLEDKAAEVIKNTNAAEES-LP---- 984
Query: 884 LVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQ 927
+I + QE+ V + E+E K + IK+K Q
Sbjct: 985 ---EIQKEHRSLLQELKV-----IQENEHALQKDALSIKLKLEQ 1020
Score = 51 (23.0 bits), Expect = 7.2e-06, Sum P(2) = 7.2e-06
Identities = 32/143 (22%), Positives = 63/143 (44%)
Query: 102 KEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITK-RFNIQVNNLTQFLPQDRVCEFAK 160
K+E + ++ +++ K F+ V +++ + +I ++ + Q + A
Sbjct: 468 KQETQGLQKEKESQEKELMGFSKSVNEARSKMDVAQSELDIYLSRYNTAVSQLSKAKDAL 527
Query: 161 LSPVKLLEETEKAVGD--PQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQE 218
++ + L+E + A+GD +LP C L EK +L+ K + +N K+L
Sbjct: 528 MAASETLKERKAAIGDIEAKLPQTECELKEKEKELQ------KLTQEEIN-FKSL----- 575
Query: 219 KDVERVRQRAELLEKVESMKKKL 241
VR +L +KVE K L
Sbjct: 576 -----VR---DLFQKVEEAKSSL 590
>POMBASE|SPBC29A10.04 [details] [associations]
symbol:psm1 "mitotic cohesin complex subunit Psm1"
species:4896 "Schizosaccharomyces pombe" [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IC] [GO:0005694 "chromosome"
evidence=IDA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0007064 "mitotic sister
chromatid cohesion" evidence=IMP] [GO:0008278 "cohesin complex"
evidence=IDA] [GO:0030261 "chromosome condensation" evidence=IEA]
[GO:0030892 "mitotic cohesin complex" evidence=NAS] [GO:0046982
"protein heterodimerization activity" evidence=IPI]
InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
PomBase:SPBC29A10.04 Pfam:PF02463 GO:GO:0005524 GO:GO:0005634
GO:GO:0051301 EMBL:CU329671 GO:GO:0006281 GenomeReviews:CU329671_GR
GO:GO:0006310 GO:GO:0030261 GO:GO:0007064 eggNOG:COG1196
SUPFAM:SSF75553 GO:GO:0030892 HOGENOM:HOG000195481 PIR:T40059
RefSeq:NP_596049.2 IntAct:O94383 STRING:O94383 PRIDE:O94383
GeneID:2540557 OrthoDB:EOG42VCQD NextBio:20801683 Uniprot:O94383
Length = 1228
Score = 140 (54.3 bits), Expect = 8.1e-11, Sum P(3) = 8.1e-11
Identities = 57/251 (22%), Positives = 111/251 (44%)
Query: 21 GNIIEIELHNFMTF-DHLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATS 79
G ++ +E+ NF ++ H I P +IGPNG+GKS+L+ AI+ LG + L R+T+
Sbjct: 2 GRLLRLEVENFKSYRGHQIIGPFEDFTSIIGPNGAGKSNLMDAISFVLGVKSSHL-RSTN 60
Query: 80 IGAYVKRGE---------------ESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNG 124
+ + RG+ + Y+K+ D E+ R I +E+ +
Sbjct: 61 VKELIYRGKILQRDNTDFTDSSNPTTAYVKLMYELDNGEQR-EYKRAITPSGATEYKIDE 119
Query: 125 KVVPKGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHC 184
++V E ++ NI V + Q V A SP++L + E+ G + ++
Sbjct: 120 EIVTFSEYCGSLQKENILVRARNFLVFQGDVETIASQSPLELSKLVEQISGSLEYKSEYD 179
Query: 185 ALVEKSSKLKTIECTVKRNGDTLNQLKALNVE----QEKDVERVRQRAELLEKVESMKKK 240
++ K V + + N+ + +N E QE+ E R +++ ++ +
Sbjct: 180 KSKDEQDK------AVNLSAHSFNKKRGINAELRQYQEQKTEAERYQSQKEKRDSAQLVY 233
Query: 241 LPWLKYDMKKA 251
L W + ++K+
Sbjct: 234 LLWKLFHLEKS 244
Score = 104 (41.7 bits), Expect = 8.1e-11, Sum P(3) = 8.1e-11
Identities = 67/349 (19%), Positives = 153/349 (43%)
Query: 657 LQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKED--DINTALAKLVDQAADLNI 714
++K++E I N Q R +E+ + + +LE + KED N+ K++ A++ +
Sbjct: 847 IEKDQESIDNYEQ----NREALESEVATAEAELELL-KEDFASENSKTEKILLAASEKKL 901
Query: 715 QQFKYAIEIKNLLVEIVSCKWSYAEKHMA---SIEFDAKIRELEFNLKQHE--KLALQAS 769
+ E+ L I + S +++++ +I K+ +++ L++ + +
Sbjct: 902 VGKRLVSELTKLSGNITLLE-SEIDRYVSEWHAILRKCKLEDIDVPLREGSLTSIPIDDV 960
Query: 770 LHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQ-A 828
+ D E ++ K E + + EL++E + E + + +Q+ + + +
Sbjct: 961 SNSGDITMGEEPSEPVINFEKFGVE-VDY--DELDEELRNDGS--ESMASVLQEKLREYS 1015
Query: 829 NSIFFLNQNI--LQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLVA 886
+ ++ N+ ++ E + ++ L + A +K K +A+K+K L + +
Sbjct: 1016 EELDQMSPNLRAIERLETVETRLAKLDEEFAAARKAAKNAKERFNAVKQKRLQKFQAAFS 1075
Query: 887 QINETFSRNFQEMAVAGEVSLDEHE----SDFDKFGILIKVKFRQSGQLEVLSAHHQ-SG 941
I+E ++E+ + L D D+ L +KF ++ Q SG
Sbjct: 1076 HISEQIDPIYKELTKSPAFPLGGTAYLTLDDLDE-PYLGGIKFHAMPPMKRFRDMDQLSG 1134
Query: 942 GERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAAS 990
GE++++ + L ++ PF V+DEI+ +D N K+ + + AS
Sbjct: 1135 GEKTMAALALLFAIHSYQPSPFFVLDEIDAALDQTNVTKIANYIRQHAS 1183
Score = 93 (37.8 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 58/259 (22%), Positives = 109/259 (42%)
Query: 644 QTEQRLIEDEAAKLQKEREEIINIV-------QIEKRKRREMENHINLRKRKLESIEKED 696
Q +++ E E + QKE+ + +V +EK M L+ ++ IE+ D
Sbjct: 208 QYQEQKTEAERYQSQKEKRDSAQLVYLLWKLFHLEKSISSNMAEVTRLKADSIQLIERRD 267
Query: 697 DINTALAKLVDQAADL--NIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIREL 754
+ + KL ++ + N+ F + + L+ A K I K E
Sbjct: 268 ENTKEIEKLKEKEGSIRRNLLAFDRKVRKQEKLI---------ASKRPELISIAEKALES 318
Query: 755 EFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTI 814
+ NL++ ++ A + Y D ++ L+ AE F+ EKE L+ +
Sbjct: 319 KSNLRKIQRKAAEIEKDYSDQASTLQVLENQLTSLSA-AEK-EFLKDMQEKEQLKGLRLL 376
Query: 815 EELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALK 874
E + + S+A+ LN N+L + + R I+ S +++ + ++I +L
Sbjct: 377 PEDKEEYEGLRSEADK---LNSNLLFKLQTLNRNIKVTSQSKDSLTSIVGDLESKIKSLH 433
Query: 875 EKW--LPTLR-NLVAQINE 890
E L T R +L+A+INE
Sbjct: 434 ESVSSLDTERADLLAKINE 452
Score = 89 (36.4 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 48/225 (21%), Positives = 107/225 (47%)
Query: 653 EAAKLQKEREEII--NIVQIEKRKRREMENHINLRKRKLESI-EKEDDINTALAKLVDQA 709
E KL KE+E I N++ + RK R+ E I ++ +L SI EK + + L K+ +A
Sbjct: 272 EIEKL-KEKEGSIRRNLLAFD-RKVRKQEKLIASKRPELISIAEKALESKSNLRKIQRKA 329
Query: 710 ADLNIQQFKYAIEIKNLLVEIVSCKWSYAE--KHMASIEFDAKIRELEFNLKQHEKLALQ 767
A++ A ++ L ++ S + E K M E +R L + +++E L +
Sbjct: 330 AEIEKDYSDQASTLQVLENQLTSLSAAEKEFLKDMQEKEQLKGLRLLPEDKEEYEGLRSE 389
Query: 768 ASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQ 827
A + +++ +++ + +S+ I +LE + + ++ L+ D +++
Sbjct: 390 ADKLNSNLLFKLQTLNRNIKVTSQSKDSLTSIVGDLESKIKSLHESVSSLDTERADLLAK 449
Query: 828 ANSIFFLNQNILQEYEHRQRQI--EDLSTKQEADKKELKRFLAEI 870
N + L++++ +++++ +L K + +EL+ L +I
Sbjct: 450 INEK--IESLELEKHDQQKKRLTYSELFHKTQELNEELQSCLQKI 492
Score = 64 (27.6 bits), Expect = 3.3e-06, Sum P(3) = 3.3e-06
Identities = 43/184 (23%), Positives = 82/184 (44%)
Query: 652 DEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAAD 711
D+A+ LQ ++ ++ EK ++M+ L+ +L +KE+ L +A
Sbjct: 338 DQASTLQVLENQLTSLSAAEKEFLKDMQEKEQLKGLRLLPEDKEE-----YEGLRSEADK 392
Query: 712 LNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASI--EFDAKIRELEFNLKQ--HEKLALQ 767
LN + ++ N +++ S ++ + SI + ++KI+ L ++ E+ L
Sbjct: 393 LN-SNLLFKLQTLNRNIKVTS----QSKDSLTSIVGDLESKIKSLHESVSSLDTERADLL 447
Query: 768 ASLHYEDCKKEVEHCRKHLSDAKRQAESIAFI-TPELEKEFLEMPTTIEELEAAIQDNIS 826
A ++ + E+E KH KR S F T EL +E I LEA+ N S
Sbjct: 448 AKINEKIESLELE---KHDQQKKRLTYSELFHKTQELNEELQSCLQKI--LEASADRNES 502
Query: 827 QANS 830
+ ++
Sbjct: 503 KQDA 506
Score = 50 (22.7 bits), Expect = 8.1e-11, Sum P(3) = 8.1e-11
Identities = 14/67 (20%), Positives = 33/67 (49%)
Query: 367 HDKIEKLGSQILELGVQANQKRLQKSEKEKILNQNK-LTLRQCSDRLKDMEDKNNKLLHA 425
H+ + L ++ +L + N+K ++ E EK Q K LT + + +++ ++ L
Sbjct: 433 HESVSSLDTERADLLAKINEK-IESLELEKHDQQKKRLTYSELFHKTQELNEELQSCLQK 491
Query: 426 LRNSGAE 432
+ + A+
Sbjct: 492 ILEASAD 498
Score = 50 (22.7 bits), Expect = 2.1e-05, Sum P(3) = 2.1e-05
Identities = 30/149 (20%), Positives = 59/149 (39%)
Query: 717 FKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDA-KIRELEFNLKQHEKLALQASLHYEDC 775
F + K+ L+ + + Y + E D K+ LE + + S ED
Sbjct: 677 FDLLTQTKDRLMHQIG-EIEYQKSSCVITESDTVKLHSLESEISLLKDKYTVVSRSVEDK 735
Query: 776 KKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAI------QDNISQAN 829
KKE+ H + + + + K E+ +E++E I + IS +
Sbjct: 736 KKEIGHYESLIKEKQPHLSELEMELRNFVKSRDELQIQVEKVEEKIFSGFCKRIGISDIH 795
Query: 830 SIFFLNQNILQEYEHRQRQIEDLSTKQEA 858
+ +++ Q + Q+Q+E TKQ++
Sbjct: 796 TYDEIHRTFTQSFT--QKQLE--FTKQKS 820
Score = 44 (20.5 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 19/77 (24%), Positives = 35/77 (45%)
Query: 857 EADKKELKRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDK 916
E+D +L +EI LK+K+ R++ + E +++ + + L E E +
Sbjct: 705 ESDTVKLHSLESEISLLKDKYTVVSRSVEDKKKEI--GHYESLIKEKQPHLSELEMELRN 762
Query: 917 FGILIKVKFRQSGQLEV 933
F VK R Q++V
Sbjct: 763 F-----VKSRDELQIQV 774
Score = 37 (18.1 bits), Expect = 1.7e-09, Sum P(3) = 1.7e-09
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 281 IEGKKQEKAILDGDCKKL 298
I+ +K E+ I G CK++
Sbjct: 772 IQVEKVEEKIFSGFCKRI 789
>UNIPROTKB|P51834 [details] [associations]
symbol:smc "Chromosome partition protein Smc"
species:224308 "Bacillus subtilis subsp. subtilis str. 168"
[GO:0005515 "protein binding" evidence=IPI] [GO:0042802 "identical
protein binding" evidence=IPI] InterPro:IPR024704 HAMAP:MF_01894
InterPro:IPR010935 InterPro:IPR011890 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0005737 GO:GO:0005694 GO:GO:0003677
GO:GO:0006281 GO:GO:0006310 EMBL:AL009126 GenomeReviews:AL009126_GR
GO:GO:0030261 GO:GO:0007062 eggNOG:COG1196 SUPFAM:SSF75553
EMBL:D64116 EMBL:D49781 PIR:G69708 RefSeq:NP_389476.2
ProteinModelPortal:P51834 SMR:P51834 IntAct:P51834
EnsemblBacteria:EBBACT00000001044 GeneID:938085 KEGG:bsu:BSU15940
PATRIC:18974993 GenoList:BSU15940 HOGENOM:HOG000036392 KO:K03529
ProtClustDB:CLSK2765274 BioCyc:BSUB:BSU15940-MONOMER
TIGRFAMs:TIGR02168 Uniprot:P51834
Length = 1186
Score = 150 (57.9 bits), Expect = 8.2e-11, Sum P(3) = 8.2e-11
Identities = 71/339 (20%), Positives = 153/339 (45%)
Query: 654 AAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAADLN 713
A K Q + E N+ ++ K++ E E + K L + E +T+ + +++AA
Sbjct: 820 AKKEQACKGEEDNLARL-KKELTETELALKEAKEDLSFLTSEMSSSTSGEEKLEEAA--- 875
Query: 714 IQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIE-FDAKIRELEFNLKQHEKLALQASLHY 772
K+ + K +E+++ + K ++ ++ +++E++ KQ L +
Sbjct: 876 ----KHKLNDKTKTIELIALRRDQRIKLQHGLDTYERELKEMKRLYKQKTTLLKDEEVKL 931
Query: 773 EDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIF 832
+ E+++ ++L R+ S++F E KE ++ T EE ++ +
Sbjct: 932 GRMEVELDNLLQYL----REEYSLSF---EGAKEKYQLETDPEEARKRVKLIKLAIEELG 984
Query: 833 FLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAE-IDALKEKWLPTLRNLVAQINET 891
+N + E+E + + LS ++E D E K L + I+ + E+ + QI
Sbjct: 985 TVNLGSIDEFERVNERYKFLSEQKE-DLTEAKNTLFQVIEEMDEEMTKRFNDTFVQIRSH 1043
Query: 892 FSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVLSAHHQSGGERSVSTILY 951
F + F+ + G L + + D +++ + G+ ++ + + SGGER+++ I
Sbjct: 1044 FDQVFRSLFGGGRAELRLTDPN-DLLHSGVEIIAQPPGK-KLQNLNLLSGGERALTAIAL 1101
Query: 952 LVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAAS 990
L S+ + PF V+DE+ +D N + Q L + +S
Sbjct: 1102 LFSILKVRPVPFCVLDEVEAALDEANVFRFAQYLKKYSS 1140
Score = 81 (33.6 bits), Expect = 8.2e-11, Sum P(3) = 8.2e-11
Identities = 45/205 (21%), Positives = 85/205 (41%)
Query: 48 VIGPNGSGKSSLVCAIALALGGDTQLLGRATSIGAYVKRGEES----GYIKISLRGDTKE 103
V+GPNGSGKS++ AI LG + R + + G +S +++L D +
Sbjct: 29 VVGPNGSGKSNITDAIRWVLGEQSARSLRGGKMEDIIFAGSDSRKRLNLAEVTLTLDNDD 88
Query: 104 EHL-------TIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQFLPQDRVC 156
L ++ R++ +SE+ N + +++++ + + + Q +V
Sbjct: 89 HFLPIDFHEVSVTRRVYRSGESEFLINNQPCRLKDIIDLFMDSGLGKEAFS-IISQGKVE 147
Query: 157 EFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVE 216
E E+A G L K+ K K E + D LN+++ + E
Sbjct: 148 EILSSKAEDRRSIFEEAAG---------VLKYKTRKKKA-ENKLFETQDNLNRVEDILHE 197
Query: 217 QEKDVERVRQRAELLEKVESMKKKL 241
E VE ++ +A + + KK+L
Sbjct: 198 LEGQVEPLKIQASIAKDYLEKKKEL 222
Score = 62 (26.9 bits), Expect = 8.2e-11, Sum P(3) = 8.2e-11
Identities = 40/217 (18%), Positives = 89/217 (41%)
Query: 215 VEQEKDVERVRQRAELLEKVESMKKKLPWLK--YDMKKAEYIXXXXXXXXXXXXXXXXXN 272
+E++K++E V + A +E + K LK M K E + +
Sbjct: 216 LEKKKELEHV-EIALTAYDIEELHGKWSTLKEKVQMAKEEELAESSAISAKEAKIEDTRD 274
Query: 273 TLHEFSKPIEGKKQEKAILDGDCKKLSS---LINENSKRRMDFLEKVDQG-VQVQGKYKX 328
+ + ++ +Q + + +KL ++ E K + E++++ VQ Q K
Sbjct: 275 KIQALDESVDELQQVLLVTSEELEKLEGRKEVLKERKKNAVQNQEQLEEAIVQFQQKETV 334
Query: 329 XXXXXXXXXXXXXXI-LKARXXXXXXXXXXQTVPAY-EPPHDKIEKLGSQILEL-GVQAN 385
+ + + Q + + E +KIE+L S EL QA+
Sbjct: 335 LKEELSKQEAVFETLQAEVKQLRAQVKEKQQALSLHNENVEEKIEQLKSDYFELLNSQAS 394
Query: 386 -QKRLQKSEKEKILNQNKLTLRQCSDRL-KDMEDKNN 420
+ LQ + + ++Q+ +TL++ +D K ++++++
Sbjct: 395 IRNELQLLDDQ--MSQSAVTLQRLADNNEKHLQERHD 429
Score = 56 (24.8 bits), Expect = 5.3e-06, Sum P(3) = 5.3e-06
Identities = 30/132 (22%), Positives = 65/132 (49%)
Query: 123 NGKVVPKGEVLE-ITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPV 181
N ++ + LE +TKR ++ T L Q+ + K S +++ EK + D +
Sbjct: 669 NNSLLGRSRELEDVTKRL-AEMEEKTALLEQE--VKTLKHS----IQDMEKKLADLRETG 721
Query: 182 QHCALVEKSSKLKTIECTV-KRNGDTLNQL--KALNVEQEKDVERVRQRAELLEKVESMK 238
+ L ++ K + E V ++N +T +L + + E D ER ++ +L E++ ++
Sbjct: 722 EGLRLKQQDVKGQLYELQVAEKNINTHLELYDQEKSALSESDEERKVRKRKLEEELSAVS 781
Query: 239 KKLPWLKYDMKK 250
+K+ L+ D+ +
Sbjct: 782 EKMKQLEEDIDR 793
Score = 44 (20.5 bits), Expect = 8.2e-05, Sum P(3) = 8.2e-05
Identities = 16/54 (29%), Positives = 32/54 (59%)
Query: 189 KSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQ-RAELLEKVESMKKKL 241
+SS + E ++ DT ++++AL+ E ++++V +E LEK+E K+ L
Sbjct: 258 ESSAISAKEAKIE---DTRDKIQALD-ESVDELQQVLLVTSEELEKLEGRKEVL 307
Score = 44 (20.5 bits), Expect = 8.2e-05, Sum P(3) = 8.2e-05
Identities = 16/67 (23%), Positives = 37/67 (55%)
Query: 192 KLKTIECTVKRNGDTLN--QLKALN---VEQEKDVERVRQR-AELLEKVESMKKKLPWLK 245
++ T+E V G ++ +K N + + +++E V +R AE+ EK +++++ LK
Sbjct: 645 RIVTLEGDVVNPGGSMTGGAVKKKNNSLLGRSRELEDVTKRLAEMEEKTALLEQEVKTLK 704
Query: 246 YDMKKAE 252
+ ++ E
Sbjct: 705 HSIQDME 711
Score = 39 (18.8 bits), Expect = 1.7e-08, Sum P(3) = 1.7e-08
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 368 DKIEKLGSQILELGVQANQKRLQKSEKEKILNQ 400
+K+++L I L QK+ Q S KE + N+
Sbjct: 782 EKMKQLEEDIDRL---TKQKQTQSSTKESLSNE 811
>RGD|61991 [details] [associations]
symbol:Smc1a "structural maintenance of chromosomes 1A"
species:10116 "Rattus norvegicus" [GO:0000075 "cell cycle
checkpoint" evidence=ISO;ISS] [GO:0000776 "kinetochore"
evidence=ISO;ISS] [GO:0003682 "chromatin binding" evidence=ISO;ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO;ISS] [GO:0005694 "chromosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA;ISO]
[GO:0007067 "mitosis" evidence=IEA] [GO:0007126 "meiosis"
evidence=ISO;IDA] [GO:0009314 "response to radiation"
evidence=ISO;ISS] [GO:0019827 "stem cell maintenance" evidence=ISO]
[GO:0030261 "chromosome condensation" evidence=IEA] [GO:0030893
"meiotic cohesin complex" evidence=ISO;ISS] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=ISO] [GO:0036033
"mediator complex binding" evidence=ISO] [GO:0042770 "signal
transduction in response to DNA damage" evidence=ISO;ISS]
[GO:0046982 "protein heterodimerization activity" evidence=ISO]
[GO:0051301 "cell division" evidence=IEA] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
RGD:61991 GO:GO:0005524 GO:GO:0005634 GO:GO:0007126 GO:GO:0005737
GO:GO:0000776 GO:GO:0051301 GO:GO:0007067 GO:GO:0006281
GO:GO:0003682 GO:GO:0042770 GO:GO:0006310 GO:GO:0030261
GO:GO:0009314 GO:GO:0032876 GO:GO:0000075 GO:GO:0007062
eggNOG:COG1196 SUPFAM:SSF75553 GO:GO:0030893 CTD:8243
HOGENOM:HOG000195481 HOVERGEN:HBG039593 KO:K06636 OrthoDB:EOG4HX507
EMBL:AJ005113 IPI:IPI00209018 RefSeq:NP_113871.1 UniGene:Rn.11763
ProteinModelPortal:Q9Z1M9 STRING:Q9Z1M9 PhosphoSite:Q9Z1M9
PRIDE:Q9Z1M9 GeneID:63996 KEGG:rno:63996 NextBio:612558
ArrayExpress:Q9Z1M9 Genevestigator:Q9Z1M9 Uniprot:Q9Z1M9
Length = 1233
Score = 126 (49.4 bits), Expect = 1.2e-10, Sum P(3) = 1.2e-10
Identities = 81/384 (21%), Positives = 165/384 (42%)
Query: 651 EDEAAKLQKEREEIINIV-----QIEKRKRREM--ENHINLRKRKLESIEKE-DDINTAL 702
E+E KL+KE + + I+ Q++ K + + ++ +N + ++E I K+ N +
Sbjct: 846 ENEIEKLKKEEQRHMKIIDETMAQLQDLKNQHLAKKSEVNDKNHEMEEIRKKLGGANKEM 905
Query: 703 AKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHE 762
L + + + + + NLL +CK + ++ D I + E + E
Sbjct: 906 THLQKEVTAIETKLEQKRSDRHNLLQ---ACKMQDIKLPLSKGTMD-DISQEEGGSQGEE 961
Query: 763 KLA---LQASLHYEDCKKEVEH---CRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEE 816
++ +S++ + E+++ C + L DA+ + E I L+++ E + ++
Sbjct: 962 SVSGSQRTSSIYAREALIEIDYGDLC-EDLKDAQAE-EEIKQEMNTLQQKLNEQQSVLQR 1019
Query: 817 LEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEK 876
+ A + + S+ Q E+E +++ + E KKE RF D
Sbjct: 1020 IAAPNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKE--RF----DRFNAC 1073
Query: 877 WLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVK-FRQSGQLEVLS 935
+ N + +I + SRN A G + +E D + + K FR L
Sbjct: 1074 FESVATN-IDEIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNL---- 1128
Query: 936 AHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTP 995
SGGE++V+ + L ++ PF V+DEI+ +D N K+ ++ S N
Sbjct: 1129 ----SGGEKTVAALALLFAIHSYKPAPFFVLDEIDAALDNTNIGKV-ANYIKEQSTCNF- 1182
Query: 996 QCFLLTPKLLPDLEYSEACSILNI 1019
Q +++ L + Y++A S++ +
Sbjct: 1183 QAIVIS---LKEEFYTKAESLIGV 1203
Score = 124 (48.7 bits), Expect = 1.2e-10, Sum P(3) = 1.2e-10
Identities = 63/227 (27%), Positives = 101/227 (44%)
Query: 26 IELHNFMTFD-HLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI---- 80
IE+ NF ++ I P R +IGPNGSGKS+L+ AI+ LG T L R ++
Sbjct: 7 IEIENFKSYKGRQIIGPFQRFTAIIGPNGSGKSNLMDAISFVLGEKTSNL-RVKTLRDLI 65
Query: 81 -GAYV-KRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKR 138
GA V K ++ + + E+ T R I SE+ N KVV E E ++
Sbjct: 66 HGAPVGKPAANRAFVSMVYSEEGAEDR-TFARVI-VGGSSEYKINNKVVQLHEYSEELEK 123
Query: 139 FNIQVNNLTQFLPQDRVCEFAKLSPVK---LLEETEKAVGDPQLPVQHCALVEKSSKLKT 195
I + + Q V A +P + L EE ++ G+ L ++ K K
Sbjct: 124 LGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRS-GE---------LAQEYDKRKK 173
Query: 196 IECTVKRNGDT-LNQLKALNVEQEKDVERVRQRAELLEKVESMKKKL 241
E VK DT N + N+ E+ + +Q E ++ +++K ++
Sbjct: 174 -EM-VKAEEDTQFNYHRKKNIAAER--KEAKQEKEEADRYQALKDEV 216
Score = 90 (36.7 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 56/271 (20%), Positives = 116/271 (42%)
Query: 654 AAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKE-DDINTALAKLVDQAADL 712
AA+ ++ ++E + + K + + L+ KL E E + +N LA +
Sbjct: 193 AAERKEAKQEKEEADRYQALKDEVVRAQVQLQLFKLYHNEVEIEKLNKELASKNKEIEKD 252
Query: 713 NIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHY 772
+ K E+K E+ + IE + K ++ E N K+ + + + + +
Sbjct: 253 KKRMDKVEDELKEKKKELGKMM-----REQQQIEKEIKEKDSELNQKRPQYIKAKENTSH 307
Query: 773 EDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIF 832
+ K++E +K L + ++ + ELEKE L + +E E +++
Sbjct: 308 KI--KKLEAAKKSLQNRQKHYKKRKGDMDELEKEMLSVEKARQEFEERMEEESQSQGRDL 365
Query: 833 FLNQNILQEYEHRQRQIEDLSTKQEADKKELKRF----LAEIDAL---KEKWLPT---LR 882
L +N +++Y HR + E+ S + +EL++F A+ D L + K + T ++
Sbjct: 366 TLEENQVKKY-HRLK--EEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAKIK 422
Query: 883 NLVAQINETFSR--NFQEMAVAGEVSLDEHE 911
+ +I E R +E + SL+E +
Sbjct: 423 QKLREIEENQKRIEKLEEYITTSKQSLEEQK 453
Score = 88 (36.0 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 55/261 (21%), Positives = 119/261 (45%)
Query: 650 IEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQA 709
+EDE + +KE +++ Q +++ +E ++ +N +KR + I+ +++ + + KL
Sbjct: 259 VEDELKEKKKELGKMMREQQQIEKEIKEKDSELN-QKRP-QYIKAKENTSHKIKKLEAAK 316
Query: 710 ADLNIQQFKYAI------EIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFN-LKQHE 762
L +Q Y E++ ++ + + + E+ + + LE N +K++
Sbjct: 317 KSLQNRQKHYKKRKGDMDELEKEMLSVEKARQEFEERMEEESQSQGRDLTLEENQVKKYH 376
Query: 763 KLALQASLHYEDCKKEVEHC-RKHLSDAKR-------QAESIAFITPELEKEFLEMPTTI 814
+L +AS +E+E R +D R + E+ A I +L +E E I
Sbjct: 377 RLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAKIKQKL-REIEENQKRI 435
Query: 815 EELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEI-DAL 873
E+LE I + L + +E E +R+I++++ KEL + + ++ DA
Sbjct: 436 EKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEIN-------KELNQVMEQLGDAR 488
Query: 874 KEKWLPTLRNLVAQINETFSR 894
++ + + A+I E+ R
Sbjct: 489 IDRQESSRQQRKAEIMESIKR 509
Score = 88 (36.0 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 52/272 (19%), Positives = 123/272 (45%)
Query: 651 EDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAA 710
E E KL KE ++ +K++ ++E+ + +K++L + +E ++ ++ +
Sbjct: 232 EVEIEKLNKELASKNKEIEKDKKRMDKVEDELKEKKKELGKMMREQQ--QIEKEIKEKDS 289
Query: 711 DLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQ-AS 769
+LN ++ +Y +N +I K A+K + + + K R+ + + + E L+++ A
Sbjct: 290 ELNQKRPQYIKAKENTSHKIK--KLEAAKKSLQNRQKHYKKRKGDMDELEKEMLSVEKAR 347
Query: 770 LHYEDCKKEVEHCR-KHLSDAKRQAESIAFITPELEKEFLEMPTTIEEL---EAAIQDNI 825
+E+ +E + + L+ + Q + + E K + +E+ + A QD +
Sbjct: 348 QEFEERMEEESQSQGRDLTLEENQVKKYHRLKEEASKRAATLAQELEKFNRDQKADQDRL 407
Query: 826 S-----QANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPT 880
+ + + Q L+E E Q++IE L K+ L+ L E+ +
Sbjct: 408 DLEERKKVETEAKIKQK-LREIEENQKRIEKLEEYITTSKQSLEEQKKLEGELTEE-VEM 465
Query: 881 LRNLVAQINETFSRNFQEMAVAGEVSLDEHES 912
+ + +IN+ ++ +++ G+ +D ES
Sbjct: 466 AKRRIDEINKELNQVMEQL---GDARIDRQES 494
Score = 72 (30.4 bits), Expect = 1.9e-05, Sum P(3) = 1.9e-05
Identities = 33/138 (23%), Positives = 61/138 (44%)
Query: 188 EKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYD 247
E +SK K IE KR ++LK E++K++ ++ + + +EK +K+K L +
Sbjct: 241 ELASKNKEIEKDKKRMDKVEDELK----EKKKELGKMMREQQQIEK--EIKEKDSEL--N 292
Query: 248 MKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENSK 307
K+ +YI +L K + +K GD +L + K
Sbjct: 293 QKRPQYIKAKENTSHKIKKLEAAKKSLQNRQKHYKKRK-------GDMDELEKEMLSVEK 345
Query: 308 RRMDFLEKVDQGVQVQGK 325
R +F E++++ Q QG+
Sbjct: 346 ARQEFEERMEEESQSQGR 363
Score = 70 (29.7 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 67/318 (21%), Positives = 129/318 (40%)
Query: 648 RLIEDEAAKLQKEREEIINIVQ-IEKRKRREME--NHINLRKRKLESIEKEDDINTALAK 704
R IE+ +++K E I Q +E++K+ E E + + KR+++ I KE +N + +
Sbjct: 426 REIEENQKRIEKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEINKE--LNQVMEQ 483
Query: 705 LVDQAADL---NIQQFKYAI--EIKNL--------LVEI---VSCKWSYAE-----KHMA 743
L D D + QQ K I IK L L+++ K+ A K+M
Sbjct: 484 LGDARIDRQESSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGKNMD 543
Query: 744 SIEFDAKI--RE-LEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFIT 800
+I D++ R+ +++ +Q + L Y + K E R+ L AK + I +
Sbjct: 544 AIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRE-LKGAKLVIDVIRYEP 602
Query: 801 PELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADK 860
P ++K L+ A + DN+ A I F H+ ++ ++
Sbjct: 603 PHIKKA-LQYACG----NALVCDNVEDARRIAFGGHQ-----RHKTVALDGTLFQKSG-- 650
Query: 861 KELKRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGIL 920
+ +++ A +W + + + E + +E A + + G+
Sbjct: 651 -VISGGASDLKAKARRWDEKAVDKLKEKKERLTEELKEQMKAKRKEAELRQVQSQAHGLQ 709
Query: 921 IKVKFRQSGQLEVLSAHH 938
+++K+ QS LE H
Sbjct: 710 MRLKYSQS-DLEQTKTRH 726
Score = 68 (29.0 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 37/174 (21%), Positives = 78/174 (44%)
Query: 750 KIRELEFNLKQHEKLALQ-ASL--HYEDCKKEVEHCRKHLSDAKRQAESIAF-ITPELEK 805
K R L NL++ KL + A+ D K+ ++ + + D K + + + E +
Sbjct: 723 KTRHLALNLQEKSKLESELANFGPRINDIKRIIQSREREMKDLKEKMNQVEDEVFEEFCR 782
Query: 806 EF-LEMPTTIEELEAAIQDNISQANSIFFLNQNILQ--EYEHRQRQIEDLSTKQEADKKE 862
E + EE + Q+ I++ + F NQ + + + Q+++ K ++
Sbjct: 783 EIGVRNIREFEEEKVKRQNEIAKKR-LEFENQKTRLGIQLDFEKNQLKEDQDKVHMWEQT 841
Query: 863 LKRFLAEIDALK---EKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESD 913
+K+ EI+ LK ++ + + +AQ+ + +N Q +A EV+ HE +
Sbjct: 842 VKKDENEIEKLKKEEQRHMKIIDETMAQLQDL--KN-QHLAKKSEVNDKNHEME 892
Score = 62 (26.9 bits), Expect = 0.00028, Sum P(3) = 0.00028
Identities = 25/108 (23%), Positives = 49/108 (45%)
Query: 134 EITKRF--NIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSS 191
E+ + F I V N+ +F +++V +++ +L E +K QL + L E
Sbjct: 775 EVFEEFCREIGVRNIREF-EEEKVKRQNEIAKKRLEFENQKTRLGIQLDFEKNQLKEDQD 833
Query: 192 KLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKK 239
K+ E TVK++ + + +LK K ++ + + L+ KK
Sbjct: 834 KVHMWEQTVKKDENEIEKLKKEEQRHMKIIDETMAQLQDLKNQHLAKK 881
Score = 58 (25.5 bits), Expect = 0.00045, Sum P(3) = 0.00045
Identities = 32/188 (17%), Positives = 81/188 (43%)
Query: 134 EITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKL 193
E +KR L +F +D+ + +L LEE +K + ++ + + E ++
Sbjct: 381 EASKRAATLAQELEKF-NRDQKADQDRLD----LEERKKVETEAKIKQKLREIEENQKRI 435
Query: 194 KTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEK-VESMKKKLPWLKYDMKKA- 251
+ +E + + +L + K L E ++VE ++R + + K + + ++L + D +++
Sbjct: 436 EKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEINKELNQVMEQLGDARIDRQESS 495
Query: 252 -EYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENSKRRM 310
+ L + +P + KK + A+ K + ++I ++ K
Sbjct: 496 RQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQ-KKYQIAVTKVLGKNMDAIIVDSEKTGR 554
Query: 311 DFLEKVDQ 318
D ++ + +
Sbjct: 555 DCIQYIKE 562
Score = 43 (20.2 bits), Expect = 1.2e-10, Sum P(3) = 1.2e-10
Identities = 18/75 (24%), Positives = 39/75 (52%)
Query: 379 ELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKL---LHALRNSGAENIF 435
E+GV + +++ E+EK+ QN++ + RL + E++ +L L +N E+
Sbjct: 783 EIGV----RNIREFEEEKVKRQNEIAKK----RL-EFENQKTRLGIQLDFEKNQLKEDQD 833
Query: 436 EAYCWLQQHRHELNK 450
+ + W Q + + N+
Sbjct: 834 KVHMWEQTVKKDENE 848
Score = 41 (19.5 bits), Expect = 0.00028, Sum P(3) = 0.00028
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 76 RATSIGAYVKRGEESGYIKISLRGDTKEEHLTIMRKIDTRNK 117
R + Y+ ++S + L G+ EE R+ID NK
Sbjct: 434 RIEKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEINK 475
Score = 40 (19.1 bits), Expect = 2.3e-10, Sum P(3) = 2.3e-10
Identities = 18/70 (25%), Positives = 32/70 (45%)
Query: 489 GDRDFLAKNLKPFDVPILNYVSNESSRKEPFQISEEMRALGISARLDQVFDAPHAVKEVL 548
G D AK + +D ++ + + R ++ E+M+A A L QV H ++ L
Sbjct: 655 GASDLKAK-ARRWDEKAVDKLKEKKERLTE-ELKEQMKAKRKEAELRQVQSQAHGLQMRL 712
Query: 549 -ISQFGLDSS 557
SQ L+ +
Sbjct: 713 KYSQSDLEQT 722
Score = 39 (18.8 bits), Expect = 2.9e-10, Sum P(3) = 2.9e-10
Identities = 16/73 (21%), Positives = 34/73 (46%)
Query: 370 IEKLGSQILELGVQANQKRLQKSEKEKI---LNQNKLTLRQCSDRLKDMEDKNNKLLHAL 426
+E+ ++ L L +Q K +SE +N K ++ +KD+++K N++
Sbjct: 719 LEQTKTRHLALNLQEKSKL--ESELANFGPRINDIKRIIQSREREMKDLKEKMNQV---- 772
Query: 427 RNSGAENIFEAYC 439
+ +FE +C
Sbjct: 773 ----EDEVFEEFC 781
Score = 37 (18.1 bits), Expect = 4.7e-10, Sum P(3) = 4.7e-10
Identities = 11/52 (21%), Positives = 29/52 (55%)
Query: 375 SQILELGVQANQKRLQKSEKEKILNQNKLTLRQCS---DRLKDMEDKNNKLL 423
+Q LG+Q + ++ Q E + ++ + T+++ ++LK E ++ K++
Sbjct: 812 NQKTRLGIQLDFEKNQLKEDQDKVHMWEQTVKKDENEIEKLKKEEQRHMKII 863
>UNIPROTKB|Q9Z1M9 [details] [associations]
symbol:Smc1a "Structural maintenance of chromosomes protein
1A" species:10116 "Rattus norvegicus" [GO:0006310 "DNA
recombination" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0030261 "chromosome condensation"
evidence=IEA] InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
RGD:61991 GO:GO:0005524 GO:GO:0005634 GO:GO:0007126 GO:GO:0005737
GO:GO:0000776 GO:GO:0051301 GO:GO:0007067 GO:GO:0006281
GO:GO:0003682 GO:GO:0042770 GO:GO:0006310 GO:GO:0030261
GO:GO:0009314 GO:GO:0032876 GO:GO:0000075 GO:GO:0007062
eggNOG:COG1196 SUPFAM:SSF75553 GO:GO:0030893 CTD:8243
HOGENOM:HOG000195481 HOVERGEN:HBG039593 KO:K06636 OrthoDB:EOG4HX507
EMBL:AJ005113 IPI:IPI00209018 RefSeq:NP_113871.1 UniGene:Rn.11763
ProteinModelPortal:Q9Z1M9 STRING:Q9Z1M9 PhosphoSite:Q9Z1M9
PRIDE:Q9Z1M9 GeneID:63996 KEGG:rno:63996 NextBio:612558
ArrayExpress:Q9Z1M9 Genevestigator:Q9Z1M9 Uniprot:Q9Z1M9
Length = 1233
Score = 126 (49.4 bits), Expect = 1.2e-10, Sum P(3) = 1.2e-10
Identities = 81/384 (21%), Positives = 165/384 (42%)
Query: 651 EDEAAKLQKEREEIINIV-----QIEKRKRREM--ENHINLRKRKLESIEKE-DDINTAL 702
E+E KL+KE + + I+ Q++ K + + ++ +N + ++E I K+ N +
Sbjct: 846 ENEIEKLKKEEQRHMKIIDETMAQLQDLKNQHLAKKSEVNDKNHEMEEIRKKLGGANKEM 905
Query: 703 AKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHE 762
L + + + + + NLL +CK + ++ D I + E + E
Sbjct: 906 THLQKEVTAIETKLEQKRSDRHNLLQ---ACKMQDIKLPLSKGTMD-DISQEEGGSQGEE 961
Query: 763 KLA---LQASLHYEDCKKEVEH---CRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEE 816
++ +S++ + E+++ C + L DA+ + E I L+++ E + ++
Sbjct: 962 SVSGSQRTSSIYAREALIEIDYGDLC-EDLKDAQAE-EEIKQEMNTLQQKLNEQQSVLQR 1019
Query: 817 LEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEK 876
+ A + + S+ Q E+E +++ + E KKE RF D
Sbjct: 1020 IAAPNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKE--RF----DRFNAC 1073
Query: 877 WLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVK-FRQSGQLEVLS 935
+ N + +I + SRN A G + +E D + + K FR L
Sbjct: 1074 FESVATN-IDEIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNL---- 1128
Query: 936 AHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTP 995
SGGE++V+ + L ++ PF V+DEI+ +D N K+ ++ S N
Sbjct: 1129 ----SGGEKTVAALALLFAIHSYKPAPFFVLDEIDAALDNTNIGKV-ANYIKEQSTCNF- 1182
Query: 996 QCFLLTPKLLPDLEYSEACSILNI 1019
Q +++ L + Y++A S++ +
Sbjct: 1183 QAIVIS---LKEEFYTKAESLIGV 1203
Score = 124 (48.7 bits), Expect = 1.2e-10, Sum P(3) = 1.2e-10
Identities = 63/227 (27%), Positives = 101/227 (44%)
Query: 26 IELHNFMTFD-HLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI---- 80
IE+ NF ++ I P R +IGPNGSGKS+L+ AI+ LG T L R ++
Sbjct: 7 IEIENFKSYKGRQIIGPFQRFTAIIGPNGSGKSNLMDAISFVLGEKTSNL-RVKTLRDLI 65
Query: 81 -GAYV-KRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKR 138
GA V K ++ + + E+ T R I SE+ N KVV E E ++
Sbjct: 66 HGAPVGKPAANRAFVSMVYSEEGAEDR-TFARVI-VGGSSEYKINNKVVQLHEYSEELEK 123
Query: 139 FNIQVNNLTQFLPQDRVCEFAKLSPVK---LLEETEKAVGDPQLPVQHCALVEKSSKLKT 195
I + + Q V A +P + L EE ++ G+ L ++ K K
Sbjct: 124 LGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRS-GE---------LAQEYDKRKK 173
Query: 196 IECTVKRNGDT-LNQLKALNVEQEKDVERVRQRAELLEKVESMKKKL 241
E VK DT N + N+ E+ + +Q E ++ +++K ++
Sbjct: 174 -EM-VKAEEDTQFNYHRKKNIAAER--KEAKQEKEEADRYQALKDEV 216
Score = 90 (36.7 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 56/271 (20%), Positives = 116/271 (42%)
Query: 654 AAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKE-DDINTALAKLVDQAADL 712
AA+ ++ ++E + + K + + L+ KL E E + +N LA +
Sbjct: 193 AAERKEAKQEKEEADRYQALKDEVVRAQVQLQLFKLYHNEVEIEKLNKELASKNKEIEKD 252
Query: 713 NIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHY 772
+ K E+K E+ + IE + K ++ E N K+ + + + + +
Sbjct: 253 KKRMDKVEDELKEKKKELGKMM-----REQQQIEKEIKEKDSELNQKRPQYIKAKENTSH 307
Query: 773 EDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIF 832
+ K++E +K L + ++ + ELEKE L + +E E +++
Sbjct: 308 KI--KKLEAAKKSLQNRQKHYKKRKGDMDELEKEMLSVEKARQEFEERMEEESQSQGRDL 365
Query: 833 FLNQNILQEYEHRQRQIEDLSTKQEADKKELKRF----LAEIDAL---KEKWLPT---LR 882
L +N +++Y HR + E+ S + +EL++F A+ D L + K + T ++
Sbjct: 366 TLEENQVKKY-HRLK--EEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAKIK 422
Query: 883 NLVAQINETFSR--NFQEMAVAGEVSLDEHE 911
+ +I E R +E + SL+E +
Sbjct: 423 QKLREIEENQKRIEKLEEYITTSKQSLEEQK 453
Score = 88 (36.0 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 55/261 (21%), Positives = 119/261 (45%)
Query: 650 IEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQA 709
+EDE + +KE +++ Q +++ +E ++ +N +KR + I+ +++ + + KL
Sbjct: 259 VEDELKEKKKELGKMMREQQQIEKEIKEKDSELN-QKRP-QYIKAKENTSHKIKKLEAAK 316
Query: 710 ADLNIQQFKYAI------EIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFN-LKQHE 762
L +Q Y E++ ++ + + + E+ + + LE N +K++
Sbjct: 317 KSLQNRQKHYKKRKGDMDELEKEMLSVEKARQEFEERMEEESQSQGRDLTLEENQVKKYH 376
Query: 763 KLALQASLHYEDCKKEVEHC-RKHLSDAKR-------QAESIAFITPELEKEFLEMPTTI 814
+L +AS +E+E R +D R + E+ A I +L +E E I
Sbjct: 377 RLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAKIKQKL-REIEENQKRI 435
Query: 815 EELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEI-DAL 873
E+LE I + L + +E E +R+I++++ KEL + + ++ DA
Sbjct: 436 EKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEIN-------KELNQVMEQLGDAR 488
Query: 874 KEKWLPTLRNLVAQINETFSR 894
++ + + A+I E+ R
Sbjct: 489 IDRQESSRQQRKAEIMESIKR 509
Score = 88 (36.0 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 52/272 (19%), Positives = 123/272 (45%)
Query: 651 EDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAA 710
E E KL KE ++ +K++ ++E+ + +K++L + +E ++ ++ +
Sbjct: 232 EVEIEKLNKELASKNKEIEKDKKRMDKVEDELKEKKKELGKMMREQQ--QIEKEIKEKDS 289
Query: 711 DLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQ-AS 769
+LN ++ +Y +N +I K A+K + + + K R+ + + + E L+++ A
Sbjct: 290 ELNQKRPQYIKAKENTSHKIK--KLEAAKKSLQNRQKHYKKRKGDMDELEKEMLSVEKAR 347
Query: 770 LHYEDCKKEVEHCR-KHLSDAKRQAESIAFITPELEKEFLEMPTTIEEL---EAAIQDNI 825
+E+ +E + + L+ + Q + + E K + +E+ + A QD +
Sbjct: 348 QEFEERMEEESQSQGRDLTLEENQVKKYHRLKEEASKRAATLAQELEKFNRDQKADQDRL 407
Query: 826 S-----QANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPT 880
+ + + Q L+E E Q++IE L K+ L+ L E+ +
Sbjct: 408 DLEERKKVETEAKIKQK-LREIEENQKRIEKLEEYITTSKQSLEEQKKLEGELTEE-VEM 465
Query: 881 LRNLVAQINETFSRNFQEMAVAGEVSLDEHES 912
+ + +IN+ ++ +++ G+ +D ES
Sbjct: 466 AKRRIDEINKELNQVMEQL---GDARIDRQES 494
Score = 72 (30.4 bits), Expect = 1.9e-05, Sum P(3) = 1.9e-05
Identities = 33/138 (23%), Positives = 61/138 (44%)
Query: 188 EKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYD 247
E +SK K IE KR ++LK E++K++ ++ + + +EK +K+K L +
Sbjct: 241 ELASKNKEIEKDKKRMDKVEDELK----EKKKELGKMMREQQQIEK--EIKEKDSEL--N 292
Query: 248 MKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENSK 307
K+ +YI +L K + +K GD +L + K
Sbjct: 293 QKRPQYIKAKENTSHKIKKLEAAKKSLQNRQKHYKKRK-------GDMDELEKEMLSVEK 345
Query: 308 RRMDFLEKVDQGVQVQGK 325
R +F E++++ Q QG+
Sbjct: 346 ARQEFEERMEEESQSQGR 363
Score = 70 (29.7 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 67/318 (21%), Positives = 129/318 (40%)
Query: 648 RLIEDEAAKLQKEREEIINIVQ-IEKRKRREME--NHINLRKRKLESIEKEDDINTALAK 704
R IE+ +++K E I Q +E++K+ E E + + KR+++ I KE +N + +
Sbjct: 426 REIEENQKRIEKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEINKE--LNQVMEQ 483
Query: 705 LVDQAADL---NIQQFKYAI--EIKNL--------LVEI---VSCKWSYAE-----KHMA 743
L D D + QQ K I IK L L+++ K+ A K+M
Sbjct: 484 LGDARIDRQESSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGKNMD 543
Query: 744 SIEFDAKI--RE-LEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFIT 800
+I D++ R+ +++ +Q + L Y + K E R+ L AK + I +
Sbjct: 544 AIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRE-LKGAKLVIDVIRYEP 602
Query: 801 PELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADK 860
P ++K L+ A + DN+ A I F H+ ++ ++
Sbjct: 603 PHIKKA-LQYACG----NALVCDNVEDARRIAFGGHQ-----RHKTVALDGTLFQKSG-- 650
Query: 861 KELKRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGIL 920
+ +++ A +W + + + E + +E A + + G+
Sbjct: 651 -VISGGASDLKAKARRWDEKAVDKLKEKKERLTEELKEQMKAKRKEAELRQVQSQAHGLQ 709
Query: 921 IKVKFRQSGQLEVLSAHH 938
+++K+ QS LE H
Sbjct: 710 MRLKYSQS-DLEQTKTRH 726
Score = 68 (29.0 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 37/174 (21%), Positives = 78/174 (44%)
Query: 750 KIRELEFNLKQHEKLALQ-ASL--HYEDCKKEVEHCRKHLSDAKRQAESIAF-ITPELEK 805
K R L NL++ KL + A+ D K+ ++ + + D K + + + E +
Sbjct: 723 KTRHLALNLQEKSKLESELANFGPRINDIKRIIQSREREMKDLKEKMNQVEDEVFEEFCR 782
Query: 806 EF-LEMPTTIEELEAAIQDNISQANSIFFLNQNILQ--EYEHRQRQIEDLSTKQEADKKE 862
E + EE + Q+ I++ + F NQ + + + Q+++ K ++
Sbjct: 783 EIGVRNIREFEEEKVKRQNEIAKKR-LEFENQKTRLGIQLDFEKNQLKEDQDKVHMWEQT 841
Query: 863 LKRFLAEIDALK---EKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESD 913
+K+ EI+ LK ++ + + +AQ+ + +N Q +A EV+ HE +
Sbjct: 842 VKKDENEIEKLKKEEQRHMKIIDETMAQLQDL--KN-QHLAKKSEVNDKNHEME 892
Score = 62 (26.9 bits), Expect = 0.00028, Sum P(3) = 0.00028
Identities = 25/108 (23%), Positives = 49/108 (45%)
Query: 134 EITKRF--NIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSS 191
E+ + F I V N+ +F +++V +++ +L E +K QL + L E
Sbjct: 775 EVFEEFCREIGVRNIREF-EEEKVKRQNEIAKKRLEFENQKTRLGIQLDFEKNQLKEDQD 833
Query: 192 KLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKK 239
K+ E TVK++ + + +LK K ++ + + L+ KK
Sbjct: 834 KVHMWEQTVKKDENEIEKLKKEEQRHMKIIDETMAQLQDLKNQHLAKK 881
Score = 58 (25.5 bits), Expect = 0.00045, Sum P(3) = 0.00045
Identities = 32/188 (17%), Positives = 81/188 (43%)
Query: 134 EITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKL 193
E +KR L +F +D+ + +L LEE +K + ++ + + E ++
Sbjct: 381 EASKRAATLAQELEKF-NRDQKADQDRLD----LEERKKVETEAKIKQKLREIEENQKRI 435
Query: 194 KTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEK-VESMKKKLPWLKYDMKKA- 251
+ +E + + +L + K L E ++VE ++R + + K + + ++L + D +++
Sbjct: 436 EKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEINKELNQVMEQLGDARIDRQESS 495
Query: 252 -EYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENSKRRM 310
+ L + +P + KK + A+ K + ++I ++ K
Sbjct: 496 RQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQ-KKYQIAVTKVLGKNMDAIIVDSEKTGR 554
Query: 311 DFLEKVDQ 318
D ++ + +
Sbjct: 555 DCIQYIKE 562
Score = 43 (20.2 bits), Expect = 1.2e-10, Sum P(3) = 1.2e-10
Identities = 18/75 (24%), Positives = 39/75 (52%)
Query: 379 ELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKL---LHALRNSGAENIF 435
E+GV + +++ E+EK+ QN++ + RL + E++ +L L +N E+
Sbjct: 783 EIGV----RNIREFEEEKVKRQNEIAKK----RL-EFENQKTRLGIQLDFEKNQLKEDQD 833
Query: 436 EAYCWLQQHRHELNK 450
+ + W Q + + N+
Sbjct: 834 KVHMWEQTVKKDENE 848
Score = 41 (19.5 bits), Expect = 0.00028, Sum P(3) = 0.00028
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 76 RATSIGAYVKRGEESGYIKISLRGDTKEEHLTIMRKIDTRNK 117
R + Y+ ++S + L G+ EE R+ID NK
Sbjct: 434 RIEKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEINK 475
Score = 40 (19.1 bits), Expect = 2.3e-10, Sum P(3) = 2.3e-10
Identities = 18/70 (25%), Positives = 32/70 (45%)
Query: 489 GDRDFLAKNLKPFDVPILNYVSNESSRKEPFQISEEMRALGISARLDQVFDAPHAVKEVL 548
G D AK + +D ++ + + R ++ E+M+A A L QV H ++ L
Sbjct: 655 GASDLKAK-ARRWDEKAVDKLKEKKERLTE-ELKEQMKAKRKEAELRQVQSQAHGLQMRL 712
Query: 549 -ISQFGLDSS 557
SQ L+ +
Sbjct: 713 KYSQSDLEQT 722
Score = 39 (18.8 bits), Expect = 2.9e-10, Sum P(3) = 2.9e-10
Identities = 16/73 (21%), Positives = 34/73 (46%)
Query: 370 IEKLGSQILELGVQANQKRLQKSEKEKI---LNQNKLTLRQCSDRLKDMEDKNNKLLHAL 426
+E+ ++ L L +Q K +SE +N K ++ +KD+++K N++
Sbjct: 719 LEQTKTRHLALNLQEKSKL--ESELANFGPRINDIKRIIQSREREMKDLKEKMNQV---- 772
Query: 427 RNSGAENIFEAYC 439
+ +FE +C
Sbjct: 773 ----EDEVFEEFC 781
Score = 37 (18.1 bits), Expect = 4.7e-10, Sum P(3) = 4.7e-10
Identities = 11/52 (21%), Positives = 29/52 (55%)
Query: 375 SQILELGVQANQKRLQKSEKEKILNQNKLTLRQCS---DRLKDMEDKNNKLL 423
+Q LG+Q + ++ Q E + ++ + T+++ ++LK E ++ K++
Sbjct: 812 NQKTRLGIQLDFEKNQLKEDQDKVHMWEQTVKKDENEIEKLKKEEQRHMKII 863
>ZFIN|ZDB-GENE-040426-57 [details] [associations]
symbol:smc1al "structural maintenance of chromosomes
1A, like" species:7955 "Danio rerio" [GO:0051276 "chromosome
organization" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006310 "DNA
recombination" evidence=IEA] [GO:0030261 "chromosome condensation"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0007062
"sister chromatid cohesion" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
ZFIN:ZDB-GENE-040426-57 GO:GO:0005524 GO:GO:0005634 GO:GO:0005694
GO:GO:0006281 GO:GO:0006310 GO:GO:0030261 GO:GO:0007062
eggNOG:COG1196 SUPFAM:SSF75553 HOGENOM:HOG000195481
HOVERGEN:HBG039593 KO:K06636 OrthoDB:EOG4HX507
GeneTree:ENSGT00580000081569 EMBL:CR376802 EMBL:CT025883
EMBL:AY648730 IPI:IPI00501499 RefSeq:NP_997975.2 UniGene:Dr.76942
STRING:Q6DRM9 Ensembl:ENSDART00000081016 GeneID:403060
KEGG:dre:403060 CTD:403060 InParanoid:Q6DRM9 OMA:NIGEVAN
NextBio:20816857 Uniprot:Q6DRM9
Length = 1233
Score = 132 (51.5 bits), Expect = 1.2e-10, Sum P(4) = 1.2e-10
Identities = 83/387 (21%), Positives = 166/387 (42%)
Query: 651 EDEAAKLQKEREEIINIV-----QIEKRKRREM--ENHINLRKRKLESIEKE-DDINTAL 702
E+E KL+KE + + I+ Q++ K + + ++ +N + ++E I K+ N L
Sbjct: 846 ENEIEKLKKEEQRNMKIIDETMAQLQDLKNQHLTKKSEVNDKNHEMEEIRKKLGGANKEL 905
Query: 703 AKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHE 762
+L + + + + + NLL +CK + + S D I + E N + E
Sbjct: 906 TQLQKEVTAIETKLEQKRSDRHNLLQ---ACKMQDIKLPLRSGTMD-DISQEEGNSQAEE 961
Query: 763 KLALQASLHYEDCKKE--VEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAA 820
L+ KE +E LS+ + + S E++ E + + E ++
Sbjct: 962 SLSSSQKTSSTVLAKEALIEIDYNSLSEDLKDSLS----DEEIKAEMNTLQQRLNEQQSI 1017
Query: 821 IQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALK----EK 876
+Q IS N +++ E + + ++ S + EA +K K+ + +K ++
Sbjct: 1018 LQ-RISAPN------MKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKERFDR 1070
Query: 877 WLPTLRNLVAQINETF---SRNFQEMAVAGEVSLDEHESDFDKFGILIKVK-FRQSGQLE 932
+ ++ I+E + SRN A G + +E D + + K FR L
Sbjct: 1071 FHACFESVATNIDEIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNL- 1129
Query: 933 VLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQP 992
SGGE++V+ + L ++ PF V+DEI+ +D N K+ ++ S
Sbjct: 1130 -------SGGEKTVAALALLFAIHSYKPAPFFVLDEIDAALDNTNIGKV-ANYIKDQSVQ 1181
Query: 993 NTPQCFLLTPKLLPDLEYSEACSILNI 1019
N Q +++ L + Y++A S++ +
Sbjct: 1182 NF-QAIVIS---LKEEFYTKADSLIGV 1204
Score = 115 (45.5 bits), Expect = 1.2e-10, Sum P(4) = 1.2e-10
Identities = 58/221 (26%), Positives = 98/221 (44%)
Query: 26 IELHNFMTFD-HLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI---- 80
IE+ NF ++ I P + +IGPNGSGKS+L+ AI+ L T L R ++
Sbjct: 7 IEIENFKSYKGRQIIGPFHKFTAIIGPNGSGKSNLMDAISFVLAEKTSNL-RVKTLKDLI 65
Query: 81 -GAYV-KRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKR 138
GA V K ++ + + D +E L+ R I + SE+ N KVV + E ++
Sbjct: 66 HGAPVGKPAANRAFVTMVYQQDGGQE-LSFSRII-IGSSSEYRINNKVVGLSDYSEELEK 123
Query: 139 FNIQVNNLTQFLPQDRVCEFAKLSPVK---LLEETEKAVGDPQLPVQHCALVEKSSKLKT 195
I + + Q V A +P + L EE ++ G+ C K +K
Sbjct: 124 LGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRS-GELAQEYDRC----KKEMVKA 178
Query: 196 IECTVKRNGDTLNQLKALNVEQE-KDVERVRQRAELLEKVE 235
E T N + N+ E K+ ++ ++ AE ++++
Sbjct: 179 EEDT------QFNYHRKKNIAAERKEAKQEKEEAERYQRLK 213
Score = 90 (36.7 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 62/279 (22%), Positives = 123/279 (44%)
Query: 646 EQRLIEDEAAKLQKEREEIINI-VQIEKRKRREMENHINLRKRKLESIEKEDDINTALAK 704
E + ++EA + Q+ ++E++ VQ++ K E+ I R+L KE D + K
Sbjct: 198 EAKQEKEEAERYQRLKDEVVRAHVQLQLFKLYHNESEIEKLNRELAHRNKEIDKDR---K 254
Query: 705 LVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKL 764
+D+ + E+K+ E+ ++ M IE + K ++ E N K+ L
Sbjct: 255 RMDRVEE----------ELKDKKKELGRMM---RDQQM--IEKEIKEKDAELNQKR--PL 297
Query: 765 ALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDN 824
++A + K++E RK L +A++ + EL++E + +E E +++
Sbjct: 298 YIKAKENTAHKIKKLEAARKSLQNAQKCYKKRKGDMDELDREQGAVEMARQEFEERMEEE 357
Query: 825 ISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRF----LAEIDAL---KEKW 877
L +N ++ Y HR + E+ S + +EL++F A+ D L + K
Sbjct: 358 AQSQGQDLQLEENQVKAY-HRLK--EEASKRAATLAQELEKFNRDQKADQDRLDLEERKK 414
Query: 878 LPT---LRNLVAQINETFSR--NFQEMAVAGEVSLDEHE 911
+ T ++ + +I E R ++ SLDE +
Sbjct: 415 IETEAKIKQKIREIEENQKRIEKLEDYITTSRQSLDEQK 453
Score = 72 (30.4 bits), Expect = 1.6e-06, Sum P(4) = 1.6e-06
Identities = 61/276 (22%), Positives = 116/276 (42%)
Query: 750 KIRELEFNLKQHEKLALQ-ASL--HYEDCKKEV---EHCRKHLSDAKRQAESIAFITPEL 803
K R L N+++ KL + A+ D K+ + E K L D E F+ E
Sbjct: 723 KTRHLSLNMQEKSKLESELANFGPRINDIKRIIQSRERDMKDLKDRMNVVEDEVFV--EF 780
Query: 804 EKEF-LEMPTTIEELEAAIQDNISQANSIFFLNQNILQ-EYEHRQRQIEDLSTKQEADKK 861
KE + EE + Q+ I++ F + L + ++ + Q+++ K ++
Sbjct: 781 CKEIGVRNIREFEEEKVKRQNEIAKKRLEFETQKTRLAIQLDYEKNQLKEDQEKVVMWEQ 840
Query: 862 ELKRFLAEIDALK---EKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDF--DK 916
+K+ EI+ LK ++ + + +AQ+ + +N Q + EV+ HE + K
Sbjct: 841 TVKKDENEIEKLKKEEQRNMKIIDETMAQLQDL--KN-QHLTKKSEVNDKNHEMEEIRKK 897
Query: 917 FGILIKVKFRQSGQLEVLSAHHQSGGERSVS-TILYLVSLQDLTNCPFRVVDEINQGMDP 975
G K + Q Q EV + + +RS +L +QD+ P R + MD
Sbjct: 898 LGGANK-ELTQL-QKEVTAIETKLEQKRSDRHNLLQACKMQDI-KLPLR-----SGTMDD 949
Query: 976 INERKMFQQLVRAASQPNTPQCFLLTPKLLPDLEYS 1011
I++ + Q + S +L + L +++Y+
Sbjct: 950 ISQEEGNSQAEESLSSSQKTSSTVLAKEALIEIDYN 985
Score = 70 (29.7 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 47/261 (18%), Positives = 107/261 (40%)
Query: 656 KLQKEREEIINIVQIEKRKRREMENHINLRKRKLESI-EKEDDINTALAKLVDQAADLNI 714
++ K+R+ + + + K K++E+ + ++ + I EK+ ++N L +A +
Sbjct: 248 EIDKDRKRMDRVEEELKDKKKELGRMMRDQQMIEKEIKEKDAELNQK-RPLYIKAKENTA 306
Query: 715 QQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQ-HEKLALQASLHYE 773
+ K + L C Y ++ E D + +E ++ E++ +A +
Sbjct: 307 HKIKKLEAARKSLQNAQKC---YKKRKGDMDELDREQGAVEMARQEFEERMEEEAQSQGQ 363
Query: 774 DCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIFF 833
D + E + + + ++ A + ELEK + + L+ + I I
Sbjct: 364 DLQLEENQVKAYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKIETEAKI-- 421
Query: 834 LNQNI--LQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLVAQINET 891
Q I ++E + R ++ED T E KR E+ E+ + + +IN
Sbjct: 422 -KQKIREIEENQKRIEKLEDYITTSRQSLDEQKRMEEELTEEVEQ----AKRRIDEINME 476
Query: 892 FSRNFQEMAVAGEVSLDEHES 912
++ +++ G+ +D E+
Sbjct: 477 LNQVMEQL---GDARIDRQEN 494
Score = 69 (29.3 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 52/240 (21%), Positives = 108/240 (45%)
Query: 650 IEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTA--LAKLVD 707
+E+E +KE ++ Q+ +++ +E + +N +KR L KE NTA + KL
Sbjct: 259 VEEELKDKKKELGRMMRDQQMIEKEIKEKDAELN-QKRPLYIKAKE---NTAHKIKKL-- 312
Query: 708 QAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRE----------LEFN 757
+AA ++Q + + + ++ + + E MA EF+ ++ E LE N
Sbjct: 313 EAARKSLQNAQKCYKKRKGDMDELDREQGAVE--MARQEFEERMEEEAQSQGQDLQLEEN 370
Query: 758 -LKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEE 816
+K + +L +AS +E+E K D K + + E E++ +E I++
Sbjct: 371 QVKAYHRLKEEASKRAATLAQELE---KFNRDQKADQDRLDL---E-ERKKIETEAKIKQ 423
Query: 817 LEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEK 876
I++N + + Q + ++R E+L+ + E K+ + E++ + E+
Sbjct: 424 KIREIEENQKRIEKLEDYITTSRQSLDEQKRMEEELTEEVEQAKRRIDEINMELNQVMEQ 483
Score = 67 (28.6 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 35/137 (25%), Positives = 70/137 (51%)
Query: 108 IMRKIDTRNKSEWFFNGKV-VPKGEV-LEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVK 165
I R I +R + ++ V + EV +E K I V N+ +F +++V +++ +
Sbjct: 751 IKRIIQSRERDMKDLKDRMNVVEDEVFVEFCKE--IGVRNIREF-EEEKVKRQNEIAKKR 807
Query: 166 LLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVR 225
L ET+K QL + L E K+ E TVK++ N+++ L E++++++ +
Sbjct: 808 LEFETQKTRLAIQLDYEKNQLKEDQEKVVMWEQTVKKDE---NEIEKLKKEEQRNMKIID 864
Query: 226 QR-AELLE-KVESMKKK 240
+ A+L + K + + KK
Sbjct: 865 ETMAQLQDLKNQHLTKK 881
Score = 65 (27.9 bits), Expect = 0.00031, Sum P(3) = 0.00031
Identities = 37/182 (20%), Positives = 79/182 (43%)
Query: 646 EQRLIEDEAAKLQKEREEIINIVQIEKRK------RREMENHINLRKRKLESIEKE---- 695
E++ IE EA QK RE N +IEK + R+ ++ + + E +E+
Sbjct: 411 ERKKIETEAKIKQKIREIEENQKRIEKLEDYITTSRQSLDEQKRMEEELTEEVEQAKRRI 470
Query: 696 DDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELE 755
D+IN L ++++Q D I + + + + + + + S K Y + + + +
Sbjct: 471 DEINMELNQVMEQLGDARIDRQENSRQQRKAEI-LESIKRLYPGSVYGRLIDLCQPTQKK 529
Query: 756 FNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIE 815
+ + + L D +K C +++ + + + E+ L ++LE+ T E
Sbjct: 530 YQIAVTKVLGKNMDAIIVDSEKTGRDCIQYIKEQRGEPETF------LPLDYLEVKPTDE 583
Query: 816 EL 817
+L
Sbjct: 584 KL 585
Score = 60 (26.2 bits), Expect = 1.6e-06, Sum P(4) = 1.6e-06
Identities = 25/125 (20%), Positives = 58/125 (46%)
Query: 650 IEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLES----IEKEDDINTALAKL 705
+ E K ++++ + + +E+RK+ E E I + R++E IEK +D T +
Sbjct: 389 LAQELEKFNRDQKADQDRLDLEERKKIETEAKIKQKIREIEENQKRIEKLEDYITTSRQS 448
Query: 706 VDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLA 765
+D+ + ++ +E ++ ++ + + + + DA+I E N +Q K
Sbjct: 449 LDEQKRME-EELTEEVEQAKRRIDEINMELNQVMEQLG----DARIDRQE-NSRQQRKAE 502
Query: 766 LQASL 770
+ S+
Sbjct: 503 ILESI 507
Score = 55 (24.4 bits), Expect = 0.00034, Sum P(3) = 0.00034
Identities = 19/96 (19%), Positives = 47/96 (48%)
Query: 134 EITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKL 193
E +KR L +F +D+ + +L LEE +K + ++ + + E ++
Sbjct: 381 EASKRAATLAQELEKF-NRDQKADQDRLD----LEERKKIETEAKIKQKIREIEENQKRI 435
Query: 194 KTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAE 229
+ +E + + +L++ K + E ++VE+ ++R +
Sbjct: 436 EKLEDYITTSRQSLDEQKRMEEELTEEVEQAKRRID 471
Score = 54 (24.1 bits), Expect = 0.00067, Sum P(3) = 0.00067
Identities = 14/56 (25%), Positives = 31/56 (55%)
Query: 178 QLPVQHCAL-VEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLE 232
Q +H +L +++ SKL E + G +N +K + +E+D++ ++ R ++E
Sbjct: 721 QTKTRHLSLNMQEKSKL---ESELANFGPRINDIKRIIQSRERDMKDLKDRMNVVE 773
Score = 53 (23.7 bits), Expect = 7.4e-06, Sum P(4) = 7.4e-06
Identities = 14/73 (19%), Positives = 42/73 (57%)
Query: 646 EQRLIEDEAAKLQKEREEIINIVQIEKRKRR--EMENHINLRKRKLESIEK-EDDINTAL 702
+ RL +E K++ E + I +IE+ ++R ++E++I ++ L+ ++ E+++ +
Sbjct: 404 QDRLDLEERKKIETEAKIKQKIREIEENQKRIEKLEDYITTSRQSLDEQKRMEEELTEEV 463
Query: 703 AKLVDQAADLNIQ 715
+ + ++N++
Sbjct: 464 EQAKRRIDEINME 476
Score = 53 (23.7 bits), Expect = 0.00053, Sum P(3) = 0.00053
Identities = 49/235 (20%), Positives = 91/235 (38%)
Query: 188 EKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYD 247
E + + K I+ KR +LK +++K++ R+ + +++EK +K+K L +
Sbjct: 241 ELAHRNKEIDKDRKRMDRVEEELK----DKKKELGRMMRDQQMIEK--EIKEKDAEL--N 292
Query: 248 MKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENSK 307
K+ YI +L K + +K + LD + + E +
Sbjct: 293 QKRPLYIKAKENTAHKIKKLEAARKSLQNAQKCYKKRKGDMDELDREQGAVEMARQEFEE 352
Query: 308 RRMDFLEKVDQGVQVQ-GKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPAYEPP 366
R + + Q +Q++ + K + + Q E
Sbjct: 353 RMEEEAQSQGQDLQLEENQVKAYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEE- 411
Query: 367 HDKIE---KLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDK 418
KIE K+ +I E ++ NQKR++K E + I T RQ D K ME++
Sbjct: 412 RKKIETEAKIKQKIRE--IEENQKRIEKLE-DYIT-----TSRQSLDEQKRMEEE 458
Score = 49 (22.3 bits), Expect = 1.2e-10, Sum P(4) = 1.2e-10
Identities = 27/131 (20%), Positives = 55/131 (41%)
Query: 208 NQLKALNVE---QEKDVERVRQRAELLEK-VESMKKKLPWLKYDMKKAEYIXXXXXXXXX 263
++++ LN E + K++++ R+R + +E+ ++ KK+L + D + E
Sbjct: 233 SEIEKLNRELAHRNKEIDKDRKRMDRVEEELKDKKKELGRMMRDQQMIEKEIKEKDAELN 292
Query: 264 XXX---XXXXXNTLHEFSKPIEGKKQ----EKAILD--GDCKKLSSLINENSKRRMDFLE 314
NT H+ K +K +K GD +L R +F E
Sbjct: 293 QKRPLYIKAKENTAHKIKKLEAARKSLQNAQKCYKKRKGDMDELDREQGAVEMARQEFEE 352
Query: 315 KVDQGVQVQGK 325
++++ Q QG+
Sbjct: 353 RMEEEAQSQGQ 363
Score = 41 (19.5 bits), Expect = 1.2e-10, Sum P(4) = 1.2e-10
Identities = 16/52 (30%), Positives = 24/52 (46%)
Query: 509 VSNESSRKEPF--QISEEMRALGISARLDQVFDAPHAVKEVL-ISQFGLDSS 557
V RKE ++ E+M+A A L QV H ++ L SQ L+ +
Sbjct: 671 VDKLKDRKEKLTDELKEQMKAKRKEAELRQVQSQAHGLQMRLKYSQSDLEQT 722
Score = 39 (18.8 bits), Expect = 2.0e-10, Sum P(4) = 2.0e-10
Identities = 18/75 (24%), Positives = 37/75 (49%)
Query: 379 ELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHAL---RNSGAENIF 435
E+GV + +++ E+EK+ QN++ + RL + E + +L L +N E+
Sbjct: 783 EIGV----RNIREFEEEKVKRQNEIAKK----RL-EFETQKTRLAIQLDYEKNQLKEDQE 833
Query: 436 EAYCWLQQHRHELNK 450
+ W Q + + N+
Sbjct: 834 KVVMWEQTVKKDENE 848
>MGI|MGI:1344345 [details] [associations]
symbol:Smc1a "structural maintenance of chromosomes 1A"
species:10090 "Mus musculus" [GO:0000075 "cell cycle checkpoint"
evidence=ISO] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000775 "chromosome, centromeric region" evidence=IEA]
[GO:0000776 "kinetochore" evidence=ISO] [GO:0003682 "chromatin
binding" evidence=ISO;IDA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005694 "chromosome"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007062 "sister chromatid cohesion" evidence=ISO]
[GO:0007067 "mitosis" evidence=IEA] [GO:0007126 "meiosis"
evidence=ISO;IPI] [GO:0019827 "stem cell maintenance" evidence=IMP]
[GO:0030261 "chromosome condensation" evidence=IEA] [GO:0030893
"meiotic cohesin complex" evidence=ISO;IDA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=ISO] [GO:0036033
"mediator complex binding" evidence=IDA] [GO:0042770 "signal
transduction in response to DNA damage" evidence=ISO] [GO:0046982
"protein heterodimerization activity" evidence=ISO] [GO:0051276
"chromosome organization" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
MGI:MGI:1344345 GO:GO:0005524 GO:GO:0007126 GO:GO:0005737
GO:GO:0005654 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
GO:GO:0006281 GO:GO:0003682 GO:GO:0042770 Reactome:REACT_118161
Reactome:REACT_120463 Reactome:REACT_75800 GO:GO:0006310
GO:GO:0030261 GO:GO:0009314 GO:GO:0032876 GO:GO:0019827
GO:GO:0000075 GO:GO:0007062 eggNOG:COG1196 SUPFAM:SSF75553
EMBL:AL672180 GO:GO:0036033 GO:GO:0030893 CTD:8243
HOGENOM:HOG000195481 HOVERGEN:HBG039593 KO:K06636 OrthoDB:EOG4HX507
EMBL:AF047600 EMBL:BC131667 EMBL:AK007334 EMBL:AK013648
EMBL:AK017948 EMBL:AK088183 IPI:IPI00123870 RefSeq:NP_062684.2
UniGene:Mm.482095 PDB:2WD5 PDBsum:2WD5 ProteinModelPortal:Q9CU62
SMR:Q9CU62 DIP:DIP-57021N IntAct:Q9CU62 STRING:Q9CU62
PhosphoSite:Q9CU62 PaxDb:Q9CU62 PRIDE:Q9CU62
Ensembl:ENSMUST00000045312 GeneID:24061 KEGG:mmu:24061
GeneTree:ENSGT00580000081569 InParanoid:A2AFQ5
EvolutionaryTrace:Q9CU62 NextBio:304025 Bgee:Q9CU62
CleanEx:MM_SMC1A Genevestigator:Q9CU62
GermOnline:ENSMUSG00000041133 Uniprot:Q9CU62
Length = 1233
Score = 127 (49.8 bits), Expect = 1.4e-10, Sum P(3) = 1.4e-10
Identities = 81/384 (21%), Positives = 166/384 (43%)
Query: 651 EDEAAKLQKEREEIINIV-----QIEKRKRREM--ENHINLRKRKLESIEKE-DDINTAL 702
E+E KL+KE + + I+ Q++ K + + ++ +N + ++E I K+ N +
Sbjct: 846 ENEIEKLKKEEQRHMKIIDETMAQLQDLKNQHLAKKSEVNDKNHEMEEIRKKLGGANKEM 905
Query: 703 AKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHE 762
L + + + + + NLL +CK + ++ D I + E + + E
Sbjct: 906 THLQKEVTAIETKLEQKRSDRHNLLQ---ACKMQDIKLPLSKGTMD-DISQEEGSSQGEE 961
Query: 763 KLA---LQASLHYEDCKKEVEH---CRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEE 816
++ +S++ + E+++ C + L DA+ + E I L+++ E + ++
Sbjct: 962 SVSGSQRTSSIYAREALIEIDYGDLC-EDLKDAQAE-EEIKQEMNTLQQKLNEQQSVLQR 1019
Query: 817 LEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEK 876
+ A + + S+ Q E+E +++ + E KKE RF D
Sbjct: 1020 IAAPNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKE--RF----DRFNAC 1073
Query: 877 WLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVK-FRQSGQLEVLS 935
+ N + +I + SRN A G + +E D + + K FR L
Sbjct: 1074 FESVATN-IDEIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNL---- 1128
Query: 936 AHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTP 995
SGGE++V+ + L ++ PF V+DEI+ +D N K+ ++ S N
Sbjct: 1129 ----SGGEKTVAALALLFAIHSYKPAPFFVLDEIDAALDNTNIGKV-ANYIKEQSTCNF- 1182
Query: 996 QCFLLTPKLLPDLEYSEACSILNI 1019
Q +++ L + Y++A S++ +
Sbjct: 1183 QAIVIS---LKEEFYTKAESLIGV 1203
Score = 122 (48.0 bits), Expect = 1.4e-10, Sum P(3) = 1.4e-10
Identities = 62/222 (27%), Positives = 100/222 (45%)
Query: 26 IELHNFMTFD-HLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI---- 80
IE+ NF ++ I P R +IGPNGSGKS+L+ AI+ LG T L R ++
Sbjct: 7 IEIENFKSYKGRQIIGPFQRFTAIIGPNGSGKSNLMDAISFVLGEKTSNL-RVKTLRDLI 65
Query: 81 -GAYV-KRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKR 138
GA V K ++ + + E+ T R I SE+ N KVV E E ++
Sbjct: 66 HGAPVGKPAANRAFVSMVYSEEGAEDR-TFARVI-VGGSSEYKINNKVVQLHEYSEELEK 123
Query: 139 FNIQVNNLTQFLPQDRVCEFAKLSPVK---LLEETEKAVGDPQLPVQHCALVEKSSKLKT 195
I + + Q V A +P + L EE ++ G+ L ++ K K
Sbjct: 124 LGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRS-GE---------LAQEYDKRKK 173
Query: 196 IECTVKRNGDT-LNQLKALNVEQE-KDVERVRQRAELLEKVE 235
E VK DT N + N+ E K+ ++ ++ A+ ++++
Sbjct: 174 -EM-VKAEEDTQFNYHRKKNIAAERKEAKQEKEEADRYQRLK 213
Score = 98 (39.6 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 57/271 (21%), Positives = 118/271 (43%)
Query: 654 AAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKE-DDINTALAKLVDQAADL 712
AA+ ++ ++E + ++ K + + L+ KL E E + +N LA +
Sbjct: 193 AAERKEAKQEKEEADRYQRLKDEVVRAQVQLQLFKLYHNEVEIEKLNKELASKNKEIEKD 252
Query: 713 NIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHY 772
+ K E+K E+ + IE + K ++ E N K+ + + + + +
Sbjct: 253 KKRMDKVEDELKEKKKELGKMM-----REQQQIEKEIKEKDSELNQKRPQYIKAKENTSH 307
Query: 773 EDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIF 832
+ K++E +K L +A++ + ELEKE L + +E E +++
Sbjct: 308 KI--KKLEAAKKSLQNAQKHYKKRKGDMDELEKEMLSVEKARQEFEERMEEESQSQGRDL 365
Query: 833 FLNQNILQEYEHRQRQIEDLSTKQEADKKELKRF----LAEIDAL---KEKWLPT---LR 882
L +N +++Y HR + E+ S + +EL++F A+ D L + K + T ++
Sbjct: 366 TLEENQVKKY-HRLK--EEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAKIK 422
Query: 883 NLVAQINETFSR--NFQEMAVAGEVSLDEHE 911
+ +I E R +E + SL+E +
Sbjct: 423 QKLREIEENQKRIEKLEEYITTSKQSLEEQK 453
Score = 90 (36.7 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 52/272 (19%), Positives = 123/272 (45%)
Query: 651 EDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAA 710
E E KL KE ++ +K++ ++E+ + +K++L + +E ++ ++ +
Sbjct: 232 EVEIEKLNKELASKNKEIEKDKKRMDKVEDELKEKKKELGKMMREQQ--QIEKEIKEKDS 289
Query: 711 DLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQ-AS 769
+LN ++ +Y +N +I K A+K + + + K R+ + + + E L+++ A
Sbjct: 290 ELNQKRPQYIKAKENTSHKIK--KLEAAKKSLQNAQKHYKKRKGDMDELEKEMLSVEKAR 347
Query: 770 LHYEDCKKEVEHCR-KHLSDAKRQAESIAFITPELEKEFLEMPTTIEEL---EAAIQDNI 825
+E+ +E + + L+ + Q + + E K + +E+ + A QD +
Sbjct: 348 QEFEERMEEESQSQGRDLTLEENQVKKYHRLKEEASKRAATLAQELEKFNRDQKADQDRL 407
Query: 826 S-----QANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPT 880
+ + + Q L+E E Q++IE L K+ L+ L E+ +
Sbjct: 408 DLEERKKVETEAKIKQK-LREIEENQKRIEKLEEYITTSKQSLEEQKKLEGELTEE-VEM 465
Query: 881 LRNLVAQINETFSRNFQEMAVAGEVSLDEHES 912
+ + +IN+ ++ +++ G+ +D ES
Sbjct: 466 AKRRIDEINKELNQVMEQL---GDARIDRQES 494
Score = 86 (35.3 bits), Expect = 7.1e-07, Sum P(2) = 7.1e-07
Identities = 55/261 (21%), Positives = 118/261 (45%)
Query: 650 IEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQA 709
+EDE + +KE +++ Q +++ +E ++ +N +KR + I+ +++ + + KL
Sbjct: 259 VEDELKEKKKELGKMMREQQQIEKEIKEKDSELN-QKRP-QYIKAKENTSHKIKKLEAAK 316
Query: 710 ADLNIQQFKYAI------EIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFN-LKQHE 762
L Q Y E++ ++ + + + E+ + + LE N +K++
Sbjct: 317 KSLQNAQKHYKKRKGDMDELEKEMLSVEKARQEFEERMEEESQSQGRDLTLEENQVKKYH 376
Query: 763 KLALQASLHYEDCKKEVEHC-RKHLSDAKR-------QAESIAFITPELEKEFLEMPTTI 814
+L +AS +E+E R +D R + E+ A I +L +E E I
Sbjct: 377 RLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAKIKQKL-REIEENQKRI 435
Query: 815 EELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEI-DAL 873
E+LE I + L + +E E +R+I++++ KEL + + ++ DA
Sbjct: 436 EKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEIN-------KELNQVMEQLGDAR 488
Query: 874 KEKWLPTLRNLVAQINETFSR 894
++ + + A+I E+ R
Sbjct: 489 IDRQESSRQQRKAEIMESIKR 509
Score = 73 (30.8 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 33/138 (23%), Positives = 61/138 (44%)
Query: 188 EKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYD 247
E +SK K IE KR ++LK E++K++ ++ + + +EK +K+K L +
Sbjct: 241 ELASKNKEIEKDKKRMDKVEDELK----EKKKELGKMMREQQQIEK--EIKEKDSEL--N 292
Query: 248 MKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENSK 307
K+ +YI +L K + +K GD +L + K
Sbjct: 293 QKRPQYIKAKENTSHKIKKLEAAKKSLQNAQKHYKKRK-------GDMDELEKEMLSVEK 345
Query: 308 RRMDFLEKVDQGVQVQGK 325
R +F E++++ Q QG+
Sbjct: 346 ARQEFEERMEEESQSQGR 363
Score = 70 (29.7 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 67/318 (21%), Positives = 129/318 (40%)
Query: 648 RLIEDEAAKLQKEREEIINIVQ-IEKRKRREME--NHINLRKRKLESIEKEDDINTALAK 704
R IE+ +++K E I Q +E++K+ E E + + KR+++ I KE +N + +
Sbjct: 426 REIEENQKRIEKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEINKE--LNQVMEQ 483
Query: 705 LVDQAADL---NIQQFKYAI--EIKNL--------LVEI---VSCKWSYAE-----KHMA 743
L D D + QQ K I IK L L+++ K+ A K+M
Sbjct: 484 LGDARIDRQESSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGKNMD 543
Query: 744 SIEFDAKI--RE-LEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFIT 800
+I D++ R+ +++ +Q + L Y + K E R+ L AK + I +
Sbjct: 544 AIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRE-LKGAKLVIDVIRYEP 602
Query: 801 PELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADK 860
P ++K L+ A + DN+ A I F H+ ++ ++
Sbjct: 603 PHIKKA-LQYACG----NALVCDNVEDARRIAFGGHQ-----RHKTVALDGTLFQKSG-- 650
Query: 861 KELKRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGIL 920
+ +++ A +W + + + E + +E A + + G+
Sbjct: 651 -VISGGASDLKAKARRWDEKAVDKLKEKKERLTEELKEQMKAKRKEAELRQVQSQAHGLQ 709
Query: 921 IKVKFRQSGQLEVLSAHH 938
+++K+ QS LE H
Sbjct: 710 MRLKYSQS-DLEQTKTRH 726
Score = 69 (29.3 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 57/280 (20%), Positives = 118/280 (42%)
Query: 750 KIRELEFNLKQHEKLALQ-ASL--HYEDCKKEVEHCRKHLSDAKRQAESIAF-ITPELEK 805
K R L NL++ KL + A+ D K+ ++ + + D K + + + E +
Sbjct: 723 KTRHLALNLQEKSKLESELANFGPRINDIKRIIQSREREMKDLKEKMNQVEDEVFEEFCR 782
Query: 806 EF-LEMPTTIEELEAAIQDNISQANSIFFLNQNILQ--EYEHRQRQIEDLSTKQEADKKE 862
E + EE + Q+ I++ + F NQ + + + Q+++ K ++
Sbjct: 783 EIGVRNIREFEEEKVKRQNEIAKKR-LEFENQKTRLGIQLDFEKNQLKEDQDKVHMWEQT 841
Query: 863 LKRFLAEIDALK---EKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGI 919
+K+ EI+ LK ++ + + +AQ+ + +N Q +A EV+ HE + + +
Sbjct: 842 VKKDENEIEKLKKEEQRHMKIIDETMAQLQDL--KN-QHLAKKSEVNDKNHEMEEIRKKL 898
Query: 920 LIKVKFRQSGQLEVLSAHHQSGGERSVS-TILYLVSLQDLTNCPFRVVDEINQG-MDPIN 977
K Q EV + + +RS +L +QD+ P +++G MD I+
Sbjct: 899 GGANKEMTHLQKEVTAIETKLEQKRSDRHNLLQACKMQDI-KLP------LSKGTMDDIS 951
Query: 978 ERKMFQQLVRAASQPNTPQCFLLTPKLLPDLEYSEACSIL 1017
+ + Q + S L+ +++Y + C L
Sbjct: 952 QEEGSSQGEESVSGSQRTSSIYAREALI-EIDYGDLCEDL 990
Score = 62 (26.9 bits), Expect = 0.00022, Sum P(3) = 0.00022
Identities = 25/108 (23%), Positives = 49/108 (45%)
Query: 134 EITKRF--NIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSS 191
E+ + F I V N+ +F +++V +++ +L E +K QL + L E
Sbjct: 775 EVFEEFCREIGVRNIREF-EEEKVKRQNEIAKKRLEFENQKTRLGIQLDFEKNQLKEDQD 833
Query: 192 KLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKK 239
K+ E TVK++ + + +LK K ++ + + L+ KK
Sbjct: 834 KVHMWEQTVKKDENEIEKLKKEEQRHMKIIDETMAQLQDLKNQHLAKK 881
Score = 58 (25.5 bits), Expect = 0.00035, Sum P(3) = 0.00035
Identities = 32/188 (17%), Positives = 81/188 (43%)
Query: 134 EITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKL 193
E +KR L +F +D+ + +L LEE +K + ++ + + E ++
Sbjct: 381 EASKRAATLAQELEKF-NRDQKADQDRLD----LEERKKVETEAKIKQKLREIEENQKRI 435
Query: 194 KTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEK-VESMKKKLPWLKYDMKKA- 251
+ +E + + +L + K L E ++VE ++R + + K + + ++L + D +++
Sbjct: 436 EKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEINKELNQVMEQLGDARIDRQESS 495
Query: 252 -EYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENSKRRM 310
+ L + +P + KK + A+ K + ++I ++ K
Sbjct: 496 RQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQ-KKYQIAVTKVLGKNMDAIIVDSEKTGR 554
Query: 311 DFLEKVDQ 318
D ++ + +
Sbjct: 555 DCIQYIKE 562
Score = 43 (20.2 bits), Expect = 1.4e-10, Sum P(3) = 1.4e-10
Identities = 18/75 (24%), Positives = 39/75 (52%)
Query: 379 ELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKL---LHALRNSGAENIF 435
E+GV + +++ E+EK+ QN++ + RL + E++ +L L +N E+
Sbjct: 783 EIGV----RNIREFEEEKVKRQNEIAKK----RL-EFENQKTRLGIQLDFEKNQLKEDQD 833
Query: 436 EAYCWLQQHRHELNK 450
+ + W Q + + N+
Sbjct: 834 KVHMWEQTVKKDENE 848
Score = 41 (19.5 bits), Expect = 0.00022, Sum P(3) = 0.00022
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 76 RATSIGAYVKRGEESGYIKISLRGDTKEEHLTIMRKIDTRNK 117
R + Y+ ++S + L G+ EE R+ID NK
Sbjct: 434 RIEKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEINK 475
Score = 40 (19.1 bits), Expect = 2.9e-10, Sum P(3) = 2.9e-10
Identities = 18/70 (25%), Positives = 32/70 (45%)
Query: 489 GDRDFLAKNLKPFDVPILNYVSNESSRKEPFQISEEMRALGISARLDQVFDAPHAVKEVL 548
G D AK + +D ++ + + R ++ E+M+A A L QV H ++ L
Sbjct: 655 GASDLKAK-ARRWDEKAVDKLKEKKERLTE-ELKEQMKAKRKEAELRQVQSQAHGLQMRL 712
Query: 549 -ISQFGLDSS 557
SQ L+ +
Sbjct: 713 KYSQSDLEQT 722
Score = 39 (18.8 bits), Expect = 3.7e-10, Sum P(3) = 3.7e-10
Identities = 16/73 (21%), Positives = 34/73 (46%)
Query: 370 IEKLGSQILELGVQANQKRLQKSEKEKI---LNQNKLTLRQCSDRLKDMEDKNNKLLHAL 426
+E+ ++ L L +Q K +SE +N K ++ +KD+++K N++
Sbjct: 719 LEQTKTRHLALNLQEKSKL--ESELANFGPRINDIKRIIQSREREMKDLKEKMNQV---- 772
Query: 427 RNSGAENIFEAYC 439
+ +FE +C
Sbjct: 773 ----EDEVFEEFC 781
>ASPGD|ASPL0000036762 [details] [associations]
symbol:AN2963 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008278 "cohesin
complex" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0007064 "mitotic sister chromatid
cohesion" evidence=IEA] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0005694
GO:GO:0006281 EMBL:BN001306 EMBL:AACD01000051 GO:GO:0006310
GO:GO:0030261 GO:GO:0007062 eggNOG:COG1196 SUPFAM:SSF75553
HOGENOM:HOG000195481 KO:K06636 OMA:NALVCET OrthoDB:EOG42VCQD
RefSeq:XP_660567.1 ProteinModelPortal:Q5B917 SMR:Q5B917
STRING:Q5B917 EnsemblFungi:CADANIAT00010118 GeneID:2874104
KEGG:ani:AN2963.2 Uniprot:Q5B917
Length = 1261
Score = 114 (45.2 bits), Expect = 1.7e-10, Sum P(4) = 1.7e-10
Identities = 64/340 (18%), Positives = 141/340 (41%)
Query: 643 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTAL 702
+++EQ + ++ +L E + + ++ +K K + ++ +R+L+ KE +
Sbjct: 885 LESEQERVRNKLDELNAELDILREKLEEQKEKYGQSAENLAHHRRELQKRSKEVESTLRF 944
Query: 703 AKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFN-LKQH 761
++ N +YA+ ++ +E + + + + D ++ + + +
Sbjct: 945 INGLETEIQRNSSS-RYAL-LRRCKLEDIDIPLTEESNPLDQLPIDELVQGADPDAMDVD 1002
Query: 762 EKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIE-ELEAA 820
E +D EV+ L D ++ +LE+E LE T+ EL+
Sbjct: 1003 EDTQANGGFSVQDYGIEVDF--DSLGDTLKEDSD-----EKLEEELLEKVRTLNSELDKM 1055
Query: 821 IQDN--ISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWL 878
+ + + S+ +N L+ E Q + K + D +E+ R +E L K
Sbjct: 1056 APNTRALERLESV----ENKLRATEKDFEQARKRARKAKDDFEEVMRRRSE---LFNKAF 1108
Query: 879 PTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVL-SAH 937
+ + I +R+ + G+ LD +SD + + L +K+ L+
Sbjct: 1109 SHISEQIGPIYRELTRS-SNYPLGGQAYLDIEDSD-EPY--LDGIKYHAMPPLKRFRDME 1164
Query: 938 HQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPIN 977
H SGGE++++ + L ++ PF V+DE++ +D N
Sbjct: 1165 HLSGGEKTMAALALLFAIHSYQPSPFFVLDEVDAALDNTN 1204
Score = 105 (42.0 bits), Expect = 1.7e-10, Sum P(4) = 1.7e-10
Identities = 27/82 (32%), Positives = 45/82 (54%)
Query: 21 GNIIEIELHNFMTFD--HLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRAT 78
G +I +EL+NF ++ H + + +IGPNGSGKS+ + AI+ LG + L R+T
Sbjct: 2 GKLIRLELYNFKSYKGHHTLLFGDAYFTSIIGPNGSGKSNSMDAISFVLGIKSSHL-RST 60
Query: 79 SIGAYVKRGEESGYIKISLRGD 100
++ + RG K+ G+
Sbjct: 61 NLRDLIYRGRVLRTSKVDADGN 82
Score = 88 (36.0 bits), Expect = 7.7e-08, Sum P(3) = 7.7e-08
Identities = 59/260 (22%), Positives = 112/260 (43%)
Query: 647 QRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHI-NLRKRKLESIEKEDDINTALAKL 705
QR+I+D +A++QK ++E+ K RR +E + N+ K D+ TA +
Sbjct: 270 QRMIDDSSAEIQKYQDEL-------KEYRRGVEKYERNVEDAKKSHARVGRDVATAEKNI 322
Query: 706 VDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASI--EFD---AKIRELEFNLKQ 760
V + + I++ A+ + V+I K +A I E D A I++L+ NLK
Sbjct: 323 VKKEKE--IEEATNALVPIDEKVDITKRKVERYSSRIAEIGKERDTQSASIKQLQKNLKV 380
Query: 761 HEKLALQASLHYE-DCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEA 819
EK A +E D +K + LS A +Q + E+ K ++ L+
Sbjct: 381 VEK----AQAQWEADWQKALSKQGGQLSQADQQ--EYHKLKEEVNKRSSAEQLKLDNLKR 434
Query: 820 AIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKW-- 877
+ + NS+ + + + + + LS ++ A + +K EI+ K++
Sbjct: 435 QRKTDAEAYNSLKSKFDSTQWQLQTLETDTKALSERKAAANETVKTTSKEIEKKKKELNA 494
Query: 878 LPTLRNLVAQINETFSRNFQ 897
+ + R V+Q+ + Q
Sbjct: 495 ISSERLRVSQMRTEYEEKLQ 514
Score = 81 (33.6 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 63/277 (22%), Positives = 113/277 (40%)
Query: 653 EAAKLQKEREEIIN--IVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAA 710
E LQ R IN I Q +++KR E EN+ + + ++I I L
Sbjct: 218 EQQTLQLNRRRAINSEIKQYQEQKR-EAENYARKAEERDQAIITH--ILWKLFHFQRMID 274
Query: 711 DLNIQQFKYAIEIKNLL--VEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHE-KLALQ 767
D + + KY E+K VE A+K A + D E K+ E + A
Sbjct: 275 DSSAEIQKYQDELKEYRRGVEKYERNVEDAKKSHARVGRDVATAEKNIVKKEKEIEEATN 334
Query: 768 ASLHYED----CKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQD 823
A + ++ K++VE +++ ++ ++ + +L+K + + EA Q
Sbjct: 335 ALVPIDEKVDITKRKVERYSSRIAEIGKERDTQSASIKQLQKNLKVVEKAQAQWEADWQK 394
Query: 824 NISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFL---AEI-DALKEKWLP 879
+S+ L+Q QEY + ++ S+ ++ LKR AE ++LK K+
Sbjct: 395 ALSKQGGQ--LSQADQQEYHKLKEEVNKRSSAEQLKLDNLKRQRKTDAEAYNSLKSKFDS 452
Query: 880 TLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDK 916
T L Q ET ++ E A ++ + +K
Sbjct: 453 TQWQL--QTLETDTKALSERKAAANETVKTTSKEIEK 487
Score = 77 (32.2 bits), Expect = 1.7e-10, Sum P(4) = 1.7e-10
Identities = 51/227 (22%), Positives = 93/227 (40%)
Query: 100 DTKEEHLTIMRKIDTRNKS--------EWFFNGKVVPKGEVLEITKRFNIQVNNLTQFLP 151
D K+ H + R + T K+ E N +VP E ++ITKR + ++ +
Sbjct: 303 DAKKSHARVGRDVATAEKNIVKKEKEIEEATNA-LVPIDEKVDITKRKVERYSSRIAEIG 361
Query: 152 QDRVCEFAKLSPV-KLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECT-VKRNGDTLNQ 209
++R + A + + K L+ EKA + Q AL ++ +L + + + +N
Sbjct: 362 KERDTQSASIKQLQKNLKVVEKAQAQWEADWQK-ALSKQGGQLSQADQQEYHKLKEEVN- 419
Query: 210 LKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAEYIXXXXXXXXXXXXXXX 269
K + EQ K RQR E S+K K ++ ++ E
Sbjct: 420 -KRSSAEQLKLDNLKRQRKTDAEAYNSLKSKFDSTQWQLQTLE-----TDTKALSERKAA 473
Query: 270 XXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENSKRRMDFLEKV 316
T+ SK IE KK+E + + ++S + E ++ L+K+
Sbjct: 474 ANETVKTTSKEIEKKKKELNAISSERLRVSQMRTEYEEKLQVVLKKL 520
Score = 73 (30.8 bits), Expect = 2.6e-10, Sum P(4) = 2.6e-10
Identities = 32/145 (22%), Positives = 67/145 (46%)
Query: 110 RKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEE 169
R I ++ SE+ N +VV + E + NI + + Q V A SP L
Sbjct: 133 RSITSQGVSEYRINNRVVTAQQYNEALEAENILIKARNFLVFQGDVEAIASQSPKDLTRL 192
Query: 170 TEKAVGDPQLPVQHCAL---VEKSSKLKTIECTVKRNGDTLN-QLKALNVEQEKDVERVR 225
E+ G + ++ L E+S++ +T++ +R +N ++K EQ+++ E
Sbjct: 193 IEQISGSLEYKAEYERLKAEAEESAEQQTLQLNRRR---AINSEIKQYQ-EQKREAENYA 248
Query: 226 QRAELLEKVESMKKKLPWLKYDMKK 250
++AE E+ +++ + W + ++
Sbjct: 249 RKAE--ERDQAIITHILWKLFHFQR 271
Score = 70 (29.7 bits), Expect = 5.7e-06, Sum P(4) = 5.7e-06
Identities = 48/237 (20%), Positives = 104/237 (43%)
Query: 645 TEQRLIEDEAAKLQKE----REEIINIVQIEKRKRREME---NHI-NLRKRKLESIEKED 696
TE+ ++ E L++ REE+ + + K K E++ + +LR + E E D
Sbjct: 730 TEEETLQGELVGLEQRLAYAREELKALERNLKDKYTELDFVKRQLEDLRPKYTEKQEVLD 789
Query: 697 DINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEF 756
+++ A+A Q A ++ Y K L + Y E S+ +A ++LEF
Sbjct: 790 ELDEAIA--TSQDAVSGVEDEIYRKFCKRLGYSNIR---EY-EVQQGSLHEEAAQKKLEF 843
Query: 757 NLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEE 816
+K ++ L +E ++ ++ ++ + Q + A + ELE E + ++E
Sbjct: 844 TT---QKSRIENQLSFE--QQRLQATTDRIASLQAQHQRDANMIGELESEQERVRNKLDE 898
Query: 817 LEAAI---QDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEI 870
L A + ++ + + + Q+ + H +R+++ S + E+ + + EI
Sbjct: 899 LNAELDILREKLEEQKEKY--GQSA-ENLAHHRRELQKRSKEVESTLRFINGLETEI 952
Score = 61 (26.5 bits), Expect = 4.2e-05, Sum P(4) = 4.2e-05
Identities = 49/248 (19%), Positives = 103/248 (41%)
Query: 660 EREEIINIVQIEKRKRREMENHINLRKRKLESIEKED--------DINTALAKLVDQAAD 711
+R E + + K K + M + NL K E+E + A A+ +A +
Sbjct: 698 KRWEDSEVESLFKLKDKIMADLANLPKGHRRGTEEETLQGELVGLEQRLAYAREELKALE 757
Query: 712 LNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLH 771
N++ KY E+ + ++ + Y EK E D I Q ++ ++
Sbjct: 758 RNLKD-KYT-ELDFVKRQLEDLRPKYTEKQEVLDELDEAIAT-----SQDAVSGVEDEIY 810
Query: 772 YEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSI 831
+ CK+ + + ++ + + Q S+ + + EF + IE + + + QA +
Sbjct: 811 RKFCKR-LGY--SNIREYEVQQGSLHEEAAQKKLEFTTQKSRIEN-QLSFEQQRLQATTD 866
Query: 832 FFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLVAQINET 891
+ + +++ I +L ++QE + +L AE+D L+EK L + Q E
Sbjct: 867 RIAS--LQAQHQRDANMIGELESEQERVRNKLDELNAELDILREK-LEEQKEKYGQSAEN 923
Query: 892 FSRNFQEM 899
+ + +E+
Sbjct: 924 LAHHRREL 931
Score = 58 (25.5 bits), Expect = 5.6e-09, Sum P(3) = 5.6e-09
Identities = 22/111 (19%), Positives = 56/111 (50%)
Query: 134 EITKRF--NIQVNNLTQF-LPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKS 190
EI ++F + +N+ ++ + Q + E A + KL T+K+ + QL + L +
Sbjct: 808 EIYRKFCKRLGYSNIREYEVQQGSLHEEA--AQKKLEFTTQKSRIENQLSFEQQRLQATT 865
Query: 191 SKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELL-EKVESMKKK 240
++ +++ +R+ + + +L++ ++ + ++L EK+E K+K
Sbjct: 866 DRIASLQAQHQRDANMIGELESEQERVRNKLDELNAELDILREKLEEQKEK 916
Score = 43 (20.2 bits), Expect = 2.6e-10, Sum P(4) = 2.6e-10
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 369 KIEKLGSQILELGVQ-----ANQKRLQKSEK 394
K+E+ S+I E+G + A+ K+LQK+ K
Sbjct: 349 KVERYSSRIAEIGKERDTQSASIKQLQKNLK 379
Score = 41 (19.5 bits), Expect = 1.7e-10, Sum P(4) = 1.7e-10
Identities = 11/43 (25%), Positives = 26/43 (60%)
Query: 383 QANQKRLQ-KSEKEKILNQ---NKLTLRQCSDRLKDMEDKNNK 421
+A QK+L+ ++K +I NQ + L+ +DR+ ++ ++ +
Sbjct: 835 EAAQKKLEFTTQKSRIENQLSFEQQRLQATTDRIASLQAQHQR 877
Score = 38 (18.4 bits), Expect = 3.3e-10, Sum P(4) = 3.3e-10
Identities = 16/65 (24%), Positives = 29/65 (44%)
Query: 383 QANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAENIFEAYCWLQ 442
Q R + +EK+++L++ + D + +ED+ + + G NI E Y Q
Sbjct: 773 QLEDLRPKYTEKQEVLDELDEAIATSQDAVSGVEDEIYRKF--CKRLGYSNIRE-YEVQQ 829
Query: 443 QHRHE 447
HE
Sbjct: 830 GSLHE 834
Score = 37 (18.1 bits), Expect = 4.1e-10, Sum P(4) = 4.1e-10
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 381 GVQANQKRLQKSEKEKI 397
G Q N KR + SE E +
Sbjct: 692 GPQQNSKRWEDSEVESL 708
>UNIPROTKB|E1BMZ9 [details] [associations]
symbol:SMC4 "Structural maintenance of chromosomes protein"
species:9913 "Bos taurus" [GO:0005634 "nucleus" evidence=IEA]
[GO:0051383 "kinetochore organization" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=IEA] [GO:0045132
"meiotic chromosome segregation" evidence=IEA] [GO:0010032 "meiotic
chromosome condensation" evidence=IEA] [GO:0007076 "mitotic
chromosome condensation" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0000796 "condensin complex" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0006281
GO:GO:0006310 GO:GO:0007076 GO:GO:0000796 GO:GO:0007062
GeneTree:ENSGT00580000081617 SUPFAM:SSF75553 OMA:IAIEFLT
EMBL:DAAA02002417 EMBL:DAAA02002418 IPI:IPI00703154
Ensembl:ENSBTAT00000007705 ArrayExpress:E1BMZ9 Uniprot:E1BMZ9
Length = 1288
Score = 148 (57.2 bits), Expect = 1.8e-10, Sum P(3) = 1.8e-10
Identities = 72/344 (20%), Positives = 154/344 (44%)
Query: 651 EDEAAKLQKEREEIINIV---QIE----KRKRREMENHINLRKRKLESIEKE-DDINTAL 702
+D+ K+ K+ +E + + Q+ R ++ ++++ +++++ EKE DD+ T L
Sbjct: 903 QDKLDKINKQLDECASAITKAQVAIKTADRNLKKAQDNVLRTEKEIKDTEKEVDDLTTEL 962
Query: 703 AKLVDQAADL--NIQQFKYAI-EI----KNLLVEIVSCKWSYAEKHMASIEFDAKIRELE 755
L D+AA++ N + ++ EI +NLL E+ + + ++ K+ +++
Sbjct: 963 KSLEDKAAEVVKNTNDAEASLPEIQKEHRNLLQELKVIQENEHALQKDALSIKLKLEQID 1022
Query: 756 FNLKQHEKLALQASLHYEDCKKEVEHCRKH-LSDAKRQAESIAFITPELEKEFLEMPTTI 814
++ +H + + Y ++E+ H + D E I ++PE E E ++ P +I
Sbjct: 1023 GHIGEHN-----SKIKY--WQREISKISLHPIED--NHVEKIPVLSPE-ELEAIKNPDSI 1072
Query: 815 EELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADK--KELKRFLAEIDA 872
A ++ + N + +Y+ ++ L E DK E F +
Sbjct: 1073 TNQIAVLEAQCHEMKP----NLGAIADYKKKEELY--LQRVAELDKITNERDNFRQAYED 1126
Query: 873 LKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKF--GILIKVKFRQSGQ 930
L+++ L I N+Q + + G+ LD +S D F GI V+ +
Sbjct: 1127 LRKQRLNEFMAGFYIITNKLKENYQMLTLGGDAELDLVDS-MDPFSEGITFSVRPPKKSW 1185
Query: 931 LEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMD 974
++ + SGGE+++S++ + +L P +DEI+ +D
Sbjct: 1186 KKIFNL---SGGEKTLSSLALVFALHHYKPTPLYFMDEIDAALD 1226
Score = 103 (41.3 bits), Expect = 1.8e-10, Sum P(3) = 1.8e-10
Identities = 94/426 (22%), Positives = 169/426 (39%)
Query: 23 IIEIELHNFMTF-DHLICKP-GSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI 80
I I NF ++ I P R + +IGPNGSGKS+++ ++ G Q + R+ +
Sbjct: 84 ITHIVNQNFKSYAGEKILGPFHKRFSCIIGPNGSGKSNVIDSMLFVFGYRAQKI-RSKKL 142
Query: 81 GAYVKRGEESGYIK-----------ISLRGDTKE----EHLTIMRKIDTRNKSEWFFNGK 125
+ +E I+ I GD E + + R N S + +GK
Sbjct: 143 SVLIHNSDEHKDIQSCTVAVHFQKIIDKEGDDYEVIPNSNFYVSRTAYRDNTSVYHVSGK 202
Query: 126 VVPKGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCA 185
+V + + I +++ + Q V + A + P E E + + +
Sbjct: 203 KTTFKDVGILLRSHGIDLDHNRFLILQGEVEQIAMMKPKGQTEHDEGMLEYLEDIIGSGR 262
Query: 186 LVEKSSKL-KTIECTVKRNGDTLNQLKALNVEQEKD-VERVRQRA-ELLE-KVESMKKKL 241
L E L + +E + G+ LN++K VE+EKD +E + A E L + E +KK
Sbjct: 263 LNEPIKVLCRRVEILNEHRGEKLNRVKM--VEKEKDALEGEKNIAIEFLTLENEIFRKKN 320
Query: 242 PWLKYDMKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPI--EGKKQEKAILDGDCKKLS 299
+Y + + ++E S + E K + KA+ D + KKL+
Sbjct: 321 HVCQYYIYDLQ--KRIAEMETQKEKINEDTKEINEKSNILSNEMKAKNKAVKDVE-KKLN 377
Query: 300 SLINENSKRRMDFLEKVD-QGVQVQGKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQ 358
+ + + F K+D + VQV+ K K KA+ +
Sbjct: 378 KITKFIEENKEKFT-KLDLEDVQVREKLKHATS-------------KAKKLEKQLQKDKE 423
Query: 359 TVPAYEPPHDKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQ-CSDRLKDMED 417
V ++ K E + I E + N +K ++E+ L + +L+Q D K+ E
Sbjct: 424 KVEEFKSIPTKSENI---IRETTTKNNALEKEKEKEEEKLKEVMDSLKQETQDLQKEKES 480
Query: 418 KNNKLL 423
+ +L+
Sbjct: 481 REKELM 486
Score = 81 (33.6 bits), Expect = 2.1e-06, Sum P(3) = 2.1e-06
Identities = 33/150 (22%), Positives = 74/150 (49%)
Query: 645 TEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAK 704
T+ +E E +KE E++ ++ K++ ++++ R+++L K +N A +K
Sbjct: 444 TKNNALEKEK---EKEEEKLKEVMDSLKQETQDLQKEKESREKELMDFSKS--VNEARSK 498
Query: 705 L-VDQAA-DLNIQQFKYAI-EIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQH 761
+ V Q+ D+ +++ A+ ++ +++ + E+ A + +AK+ + E LK+
Sbjct: 499 MDVAQSELDIYLRRHNTAVSQLGKAKEALMAASETLKERKAAIGDIEAKLPQTEHELKEK 558
Query: 762 EKLALQASLHYE-DCKKEVEHCRKHLSDAK 790
EK LQ E + K V + + +AK
Sbjct: 559 EK-ELQKLTQEEINFKSLVRDLFQKVEEAK 587
Score = 76 (31.8 bits), Expect = 0.00080, Sum P(2) = 0.00080
Identities = 37/249 (14%), Positives = 106/249 (42%)
Query: 643 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESI-EKEDDINTA 701
M+++ + +A ++Q+++ ++ + + REM N + ++ + E+E+ +N
Sbjct: 779 MESQLQRDSQKAVQIQEQKVQLEEAILRLRHSEREMRNTLEKFSASIQRLSEQEEYLNVQ 838
Query: 702 LAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAK-IRELEFNLKQ 760
+ +L +A L K ++ V +++ + +E + K + + +
Sbjct: 839 VKEL--EANVLATVPDKKQQKVLEENVNTFKTEYNSVAERAGKVEAEVKRLHNIIVEINN 896
Query: 761 HEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAA 820
H+ A Q L + K+++ C ++ A+ ++ + + L I++ E
Sbjct: 897 HKLKAQQDKL--DKINKQLDECASAITKAQVAIKTADRNLKKAQDNVLRTEKEIKDTEKE 954
Query: 821 IQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPT 880
+ D ++ S+ +++ + + ++ + +ELK AL++ L +
Sbjct: 955 VDDLTTELKSLEDKAAEVVKNTNDAEASLPEIQKEHRNLLQELKVIQENEHALQKDAL-S 1013
Query: 881 LRNLVAQIN 889
++ + QI+
Sbjct: 1014 IKLKLEQID 1022
Score = 68 (29.0 bits), Expect = 2.1e-06, Sum P(3) = 2.1e-06
Identities = 51/237 (21%), Positives = 97/237 (40%)
Query: 768 ASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFL-------EMPTTIEELEAA 820
+S+ E ++EV L ++A I +LE+ L EM T+E+ A+
Sbjct: 765 SSVVVEISEEEVNKMESQLQRDSQKAVQIQEQKVQLEEAILRLRHSEREMRNTLEKFSAS 824
Query: 821 IQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKW--- 877
IQ +S+ +LN + + + + D +Q+ ++ + F E +++ E+
Sbjct: 825 IQ-RLSEQEE--YLNVQVKELEANVLATVPD-KKQQKVLEENVNTFKTEYNSVAERAGKV 880
Query: 878 ---LPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFR--QSGQLE 932
+ L N++ +IN + Q+ LDE S K + IK R + Q
Sbjct: 881 EAEVKRLHNIIVEINNHKLKAQQDKLDKINKQLDECASAITKAQVAIKTADRNLKKAQDN 940
Query: 933 VLSAHHQ-SGGERSVSTILY-LVSLQDLTNCPFRVVDEINQGMDPINE--RKMFQQL 985
VL + E+ V + L SL+D + ++ + I + R + Q+L
Sbjct: 941 VLRTEKEIKDTEKEVDDLTTELKSLEDKAAEVVKNTNDAEASLPEIQKEHRNLLQEL 997
Score = 40 (19.1 bits), Expect = 1.8e-10, Sum P(3) = 1.8e-10
Identities = 24/110 (21%), Positives = 45/110 (40%)
Query: 376 QILELGVQANQKRLQK-SEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAENI 434
+I E V + +LQ+ S+K + + K+ L + RL+ E + L ++ + +
Sbjct: 770 EISEEEVNKMESQLQRDSQKAVQIQEQKVQLEEAILRLRHSEREMRNTLEKF-SASIQRL 828
Query: 435 FEAYCWLQQHRHELNKEAYGPV-------LLEVNVSN-RAHANYLEDHVG 476
E +L EL V +LE NV+ + N + + G
Sbjct: 829 SEQEEYLNVQVKELEANVLATVPDKKQQKVLEENVNTFKTEYNSVAERAG 878
>UNIPROTKB|Q14683 [details] [associations]
symbol:SMC1A "Structural maintenance of chromosomes protein
1A" species:9606 "Homo sapiens" [GO:0006310 "DNA recombination"
evidence=IEA] [GO:0030261 "chromosome condensation" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0019827 "stem cell maintenance" evidence=IEA]
[GO:0036033 "mediator complex binding" evidence=IEA] [GO:0000777
"condensed chromosome kinetochore" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=IPI] [GO:0042770
"signal transduction in response to DNA damage" evidence=IDA]
[GO:0006281 "DNA repair" evidence=TAS] [GO:0000075 "cell cycle
checkpoint" evidence=IDA] [GO:0009314 "response to radiation"
evidence=IEP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008280 "cohesin core heterodimer" evidence=TAS] [GO:0005634
"nucleus" evidence=IDA] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0007052 "mitotic spindle organization"
evidence=TAS] [GO:0003777 "microtubule motor activity"
evidence=NAS] [GO:0007064 "mitotic sister chromatid cohesion"
evidence=TAS] [GO:0000776 "kinetochore" evidence=IDA] [GO:0007126
"meiosis" evidence=ISS] [GO:0000070 "mitotic sister chromatid
segregation" evidence=TAS] [GO:0030893 "meiotic cohesin complex"
evidence=IDA] [GO:0000794 "condensed nuclear chromosome"
evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0007091 "metaphase/anaphase transition of mitotic
cell cycle" evidence=TAS] [GO:0008380 "RNA splicing" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IMP] [GO:0007062
"sister chromatid cohesion" evidence=IMP] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
Reactome:REACT_71 InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0007126 GO:GO:0005737
Reactome:REACT_115566 GO:GO:0005654 Reactome:REACT_21300
GO:GO:0000776 GO:GO:0051301 GO:GO:0007052 GO:GO:0006281
Reactome:REACT_1675 GO:GO:0003682 GO:GO:0042770
Reactome:REACT_111183 GO:GO:0006310 GO:GO:0000794 GO:GO:0030261
GO:GO:0009314 GO:GO:0003777 GO:GO:0032876 GO:GO:0007091
GO:GO:0000398 GO:GO:0000075 GO:GO:0000236 GO:GO:0000777
GO:GO:0007064 eggNOG:COG1196 SUPFAM:SSF75553 EMBL:Z97054
Orphanet:199 EMBL:AL161779 GO:GO:0030893 GO:GO:0008280 CTD:8243
HOGENOM:HOG000195481 HOVERGEN:HBG039593 KO:K06636 OrthoDB:EOG4HX507
EMBL:S78271 EMBL:D80000 EMBL:BC112127 IPI:IPI00291939 PIR:I54383
RefSeq:NP_006297.2 UniGene:Hs.211602 ProteinModelPortal:Q14683
SMR:Q14683 DIP:DIP-30911N IntAct:Q14683 MINT:MINT-233274
STRING:Q14683 PhosphoSite:Q14683 DMDM:29336622 PaxDb:Q14683
PeptideAtlas:Q14683 PRIDE:Q14683 Ensembl:ENST00000322213
GeneID:8243 KEGG:hsa:8243 UCSC:uc004dsg.3 GeneCards:GC0XM053417
HGNC:HGNC:11111 HPA:CAB025404 HPA:HPA005499 MIM:300040 MIM:300590
neXtProt:NX_Q14683 PharmGKB:PA35961 InParanoid:Q14683 OMA:NALVCET
PhylomeDB:Q14683 ChiTaRS:SMC1A GenomeRNAi:8243 NextBio:31006
ArrayExpress:Q14683 Bgee:Q14683 CleanEx:HS_SMC1A
Genevestigator:Q14683 GermOnline:ENSG00000072501 Uniprot:Q14683
Length = 1233
Score = 126 (49.4 bits), Expect = 1.9e-10, Sum P(3) = 1.9e-10
Identities = 79/383 (20%), Positives = 166/383 (43%)
Query: 651 EDEAAKLQKEREEIINIV-----QIEKRKRREM--ENHINLRKRKLESIEKE-DDINTAL 702
E+E KL+KE + + I+ Q++ K + + ++ +N + ++E I K+ N +
Sbjct: 846 ENEIEKLKKEEQRHMKIIDETMAQLQDLKNQHLAKKSEVNDKNHEMEEIRKKLGGANKEM 905
Query: 703 AKLVDQAADLNIQQFKYAIEIKNLL--VEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQ 760
L + + + + + NLL ++ K ++ M I + + E ++
Sbjct: 906 THLQKEVTAIETKLEQKRSDRHNLLQACKMQDIKLPLSKGTMDDISQEEGSSQGEDSVSG 965
Query: 761 HEKLALQASLHYEDCKKEVEH---CRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEEL 817
++++ S++ + E+++ C + L DA+ + E I L+++ E + ++ +
Sbjct: 966 SQRIS---SIYAREALIEIDYGDLC-EDLKDAQAE-EEIKQEMNTLQQKLNEQQSVLQRI 1020
Query: 818 EAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKW 877
A + + S+ Q E+E +++ + E KKE RF D +
Sbjct: 1021 AAPNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKE--RF----DRFNACF 1074
Query: 878 LPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVK-FRQSGQLEVLSA 936
N + +I + SRN A G + +E D + + K FR L
Sbjct: 1075 ESVATN-IDEIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNL----- 1128
Query: 937 HHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTPQ 996
SGGE++V+ + L ++ PF V+DEI+ +D N K+ ++ S N Q
Sbjct: 1129 ---SGGEKTVAALALLFAIHSYKPAPFFVLDEIDAALDNTNIGKV-ANYIKEQSTCNF-Q 1183
Query: 997 CFLLTPKLLPDLEYSEACSILNI 1019
+++ L + Y++A S++ +
Sbjct: 1184 AIVIS---LKEEFYTKAESLIGV 1203
Score = 122 (48.0 bits), Expect = 1.9e-10, Sum P(3) = 1.9e-10
Identities = 62/222 (27%), Positives = 100/222 (45%)
Query: 26 IELHNFMTFD-HLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI---- 80
IE+ NF ++ I P R +IGPNGSGKS+L+ AI+ LG T L R ++
Sbjct: 7 IEIENFKSYKGRQIIGPFQRFTAIIGPNGSGKSNLMDAISFVLGEKTSNL-RVKTLRDLI 65
Query: 81 -GAYV-KRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKR 138
GA V K ++ + + E+ T R I SE+ N KVV E E ++
Sbjct: 66 HGAPVGKPAANRAFVSMVYSEEGAEDR-TFARVI-VGGSSEYKINNKVVQLHEYSEELEK 123
Query: 139 FNIQVNNLTQFLPQDRVCEFAKLSPVK---LLEETEKAVGDPQLPVQHCALVEKSSKLKT 195
I + + Q V A +P + L EE ++ G+ L ++ K K
Sbjct: 124 LGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRS-GE---------LAQEYDKRKK 173
Query: 196 IECTVKRNGDT-LNQLKALNVEQE-KDVERVRQRAELLEKVE 235
E VK DT N + N+ E K+ ++ ++ A+ ++++
Sbjct: 174 -EM-VKAEEDTQFNYHRKKNIAAERKEAKQEKEEADRYQRLK 213
Score = 98 (39.6 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 57/271 (21%), Positives = 118/271 (43%)
Query: 654 AAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKE-DDINTALAKLVDQAADL 712
AA+ ++ ++E + ++ K + + L+ KL E E + +N LA +
Sbjct: 193 AAERKEAKQEKEEADRYQRLKDEVVRAQVQLQLFKLYHNEVEIEKLNKELASKNKEIEKD 252
Query: 713 NIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHY 772
+ K E+K E+ + IE + K ++ E N K+ + + + + +
Sbjct: 253 KKRMDKVEDELKEKKKELGKMM-----REQQQIEKEIKEKDSELNQKRPQYIKAKENTSH 307
Query: 773 EDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIF 832
+ K++E +K L +A++ + ELEKE L + +E E +++
Sbjct: 308 KI--KKLEAAKKSLQNAQKHYKKRKGDMDELEKEMLSVEKARQEFEERMEEESQSQGRDL 365
Query: 833 FLNQNILQEYEHRQRQIEDLSTKQEADKKELKRF----LAEIDAL---KEKWLPT---LR 882
L +N +++Y HR + E+ S + +EL++F A+ D L + K + T ++
Sbjct: 366 TLEENQVKKY-HRLK--EEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAKIK 422
Query: 883 NLVAQINETFSR--NFQEMAVAGEVSLDEHE 911
+ +I E R +E + SL+E +
Sbjct: 423 QKLREIEENQKRIEKLEEYITTSKQSLEEQK 453
Score = 90 (36.7 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 52/272 (19%), Positives = 123/272 (45%)
Query: 651 EDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAA 710
E E KL KE ++ +K++ ++E+ + +K++L + +E ++ ++ +
Sbjct: 232 EVEIEKLNKELASKNKEIEKDKKRMDKVEDELKEKKKELGKMMREQQ--QIEKEIKEKDS 289
Query: 711 DLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQ-AS 769
+LN ++ +Y +N +I K A+K + + + K R+ + + + E L+++ A
Sbjct: 290 ELNQKRPQYIKAKENTSHKIK--KLEAAKKSLQNAQKHYKKRKGDMDELEKEMLSVEKAR 347
Query: 770 LHYEDCKKEVEHCR-KHLSDAKRQAESIAFITPELEKEFLEMPTTIEEL---EAAIQDNI 825
+E+ +E + + L+ + Q + + E K + +E+ + A QD +
Sbjct: 348 QEFEERMEEESQSQGRDLTLEENQVKKYHRLKEEASKRAATLAQELEKFNRDQKADQDRL 407
Query: 826 S-----QANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPT 880
+ + + Q L+E E Q++IE L K+ L+ L E+ +
Sbjct: 408 DLEERKKVETEAKIKQK-LREIEENQKRIEKLEEYITTSKQSLEEQKKLEGELTEE-VEM 465
Query: 881 LRNLVAQINETFSRNFQEMAVAGEVSLDEHES 912
+ + +IN+ ++ +++ G+ +D ES
Sbjct: 466 AKRRIDEINKELNQVMEQL---GDARIDRQES 494
Score = 86 (35.3 bits), Expect = 7.1e-07, Sum P(2) = 7.1e-07
Identities = 55/261 (21%), Positives = 118/261 (45%)
Query: 650 IEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQA 709
+EDE + +KE +++ Q +++ +E ++ +N +KR + I+ +++ + + KL
Sbjct: 259 VEDELKEKKKELGKMMREQQQIEKEIKEKDSELN-QKRP-QYIKAKENTSHKIKKLEAAK 316
Query: 710 ADLNIQQFKYAI------EIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFN-LKQHE 762
L Q Y E++ ++ + + + E+ + + LE N +K++
Sbjct: 317 KSLQNAQKHYKKRKGDMDELEKEMLSVEKARQEFEERMEEESQSQGRDLTLEENQVKKYH 376
Query: 763 KLALQASLHYEDCKKEVEHC-RKHLSDAKR-------QAESIAFITPELEKEFLEMPTTI 814
+L +AS +E+E R +D R + E+ A I +L +E E I
Sbjct: 377 RLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAKIKQKL-REIEENQKRI 435
Query: 815 EELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEI-DAL 873
E+LE I + L + +E E +R+I++++ KEL + + ++ DA
Sbjct: 436 EKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEIN-------KELNQVMEQLGDAR 488
Query: 874 KEKWLPTLRNLVAQINETFSR 894
++ + + A+I E+ R
Sbjct: 489 IDRQESSRQQRKAEIMESIKR 509
Score = 73 (30.8 bits), Expect = 1.5e-05, Sum P(3) = 1.5e-05
Identities = 33/138 (23%), Positives = 61/138 (44%)
Query: 188 EKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYD 247
E +SK K IE KR ++LK E++K++ ++ + + +EK +K+K L +
Sbjct: 241 ELASKNKEIEKDKKRMDKVEDELK----EKKKELGKMMREQQQIEK--EIKEKDSEL--N 292
Query: 248 MKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENSK 307
K+ +YI +L K + +K GD +L + K
Sbjct: 293 QKRPQYIKAKENTSHKIKKLEAAKKSLQNAQKHYKKRK-------GDMDELEKEMLSVEK 345
Query: 308 RRMDFLEKVDQGVQVQGK 325
R +F E++++ Q QG+
Sbjct: 346 ARQEFEERMEEESQSQGR 363
Score = 70 (29.7 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 67/318 (21%), Positives = 129/318 (40%)
Query: 648 RLIEDEAAKLQKEREEIINIVQ-IEKRKRREME--NHINLRKRKLESIEKEDDINTALAK 704
R IE+ +++K E I Q +E++K+ E E + + KR+++ I KE +N + +
Sbjct: 426 REIEENQKRIEKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEINKE--LNQVMEQ 483
Query: 705 LVDQAADL---NIQQFKYAI--EIKNL--------LVEI---VSCKWSYAE-----KHMA 743
L D D + QQ K I IK L L+++ K+ A K+M
Sbjct: 484 LGDARIDRQESSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGKNMD 543
Query: 744 SIEFDAKI--RE-LEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFIT 800
+I D++ R+ +++ +Q + L Y + K E R+ L AK + I +
Sbjct: 544 AIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRE-LKGAKLVIDVIRYEP 602
Query: 801 PELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADK 860
P ++K L+ A + DN+ A I F H+ ++ ++
Sbjct: 603 PHIKKA-LQYACG----NALVCDNVEDARRIAFGGHQ-----RHKTVALDGTLFQKSG-- 650
Query: 861 KELKRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGIL 920
+ +++ A +W + + + E + +E A + + G+
Sbjct: 651 -VISGGASDLKAKARRWDEKAVDKLKEKKERLTEELKEQMKAKRKEAELRQVQSQAHGLQ 709
Query: 921 IKVKFRQSGQLEVLSAHH 938
+++K+ QS LE H
Sbjct: 710 MRLKYSQS-DLEQTKTRH 726
Score = 68 (29.0 bits), Expect = 0.00023, Sum P(3) = 0.00023
Identities = 37/174 (21%), Positives = 78/174 (44%)
Query: 750 KIRELEFNLKQHEKLALQ-ASL--HYEDCKKEVEHCRKHLSDAKRQAESIAF-ITPELEK 805
K R L NL++ KL + A+ D K+ ++ + + D K + + + E +
Sbjct: 723 KTRHLALNLQEKSKLESELANFGPRINDIKRIIQSREREMKDLKEKMNQVEDEVFEEFCR 782
Query: 806 EF-LEMPTTIEELEAAIQDNISQANSIFFLNQNILQ--EYEHRQRQIEDLSTKQEADKKE 862
E + EE + Q+ I++ + F NQ + + + Q+++ K ++
Sbjct: 783 EIGVRNIREFEEEKVKRQNEIAKKR-LEFENQKTRLGIQLDFEKNQLKEDQDKVHMWEQT 841
Query: 863 LKRFLAEIDALK---EKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESD 913
+K+ EI+ LK ++ + + +AQ+ + +N Q +A EV+ HE +
Sbjct: 842 VKKDENEIEKLKKEEQRHMKIIDETMAQLQDL--KN-QHLAKKSEVNDKNHEME 892
Score = 62 (26.9 bits), Expect = 0.00028, Sum P(3) = 0.00028
Identities = 25/108 (23%), Positives = 49/108 (45%)
Query: 134 EITKRF--NIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSS 191
E+ + F I V N+ +F +++V +++ +L E +K QL + L E
Sbjct: 775 EVFEEFCREIGVRNIREF-EEEKVKRQNEIAKKRLEFENQKTRLGIQLDFEKNQLKEDQD 833
Query: 192 KLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKK 239
K+ E TVK++ + + +LK K ++ + + L+ KK
Sbjct: 834 KVHMWEQTVKKDENEIEKLKKEEQRHMKIIDETMAQLQDLKNQHLAKK 881
Score = 58 (25.5 bits), Expect = 0.00045, Sum P(3) = 0.00045
Identities = 32/188 (17%), Positives = 81/188 (43%)
Query: 134 EITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKL 193
E +KR L +F +D+ + +L LEE +K + ++ + + E ++
Sbjct: 381 EASKRAATLAQELEKF-NRDQKADQDRLD----LEERKKVETEAKIKQKLREIEENQKRI 435
Query: 194 KTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEK-VESMKKKLPWLKYDMKKA- 251
+ +E + + +L + K L E ++VE ++R + + K + + ++L + D +++
Sbjct: 436 EKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEINKELNQVMEQLGDARIDRQESS 495
Query: 252 -EYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENSKRRM 310
+ L + +P + KK + A+ K + ++I ++ K
Sbjct: 496 RQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQ-KKYQIAVTKVLGKNMDAIIVDSEKTGR 554
Query: 311 DFLEKVDQ 318
D ++ + +
Sbjct: 555 DCIQYIKE 562
Score = 43 (20.2 bits), Expect = 1.9e-10, Sum P(3) = 1.9e-10
Identities = 18/75 (24%), Positives = 39/75 (52%)
Query: 379 ELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKL---LHALRNSGAENIF 435
E+GV + +++ E+EK+ QN++ + RL + E++ +L L +N E+
Sbjct: 783 EIGV----RNIREFEEEKVKRQNEIAKK----RL-EFENQKTRLGIQLDFEKNQLKEDQD 833
Query: 436 EAYCWLQQHRHELNK 450
+ + W Q + + N+
Sbjct: 834 KVHMWEQTVKKDENE 848
Score = 41 (19.5 bits), Expect = 0.00028, Sum P(3) = 0.00028
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 76 RATSIGAYVKRGEESGYIKISLRGDTKEEHLTIMRKIDTRNK 117
R + Y+ ++S + L G+ EE R+ID NK
Sbjct: 434 RIEKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEINK 475
Score = 40 (19.1 bits), Expect = 3.7e-10, Sum P(3) = 3.7e-10
Identities = 18/70 (25%), Positives = 32/70 (45%)
Query: 489 GDRDFLAKNLKPFDVPILNYVSNESSRKEPFQISEEMRALGISARLDQVFDAPHAVKEVL 548
G D AK + +D ++ + + R ++ E+M+A A L QV H ++ L
Sbjct: 655 GASDLKAK-ARRWDEKAVDKLKEKKERLTE-ELKEQMKAKRKEAELRQVQSQAHGLQMRL 712
Query: 549 -ISQFGLDSS 557
SQ L+ +
Sbjct: 713 KYSQSDLEQT 722
Score = 39 (18.8 bits), Expect = 4.7e-10, Sum P(3) = 4.7e-10
Identities = 16/73 (21%), Positives = 34/73 (46%)
Query: 370 IEKLGSQILELGVQANQKRLQKSEKEKI---LNQNKLTLRQCSDRLKDMEDKNNKLLHAL 426
+E+ ++ L L +Q K +SE +N K ++ +KD+++K N++
Sbjct: 719 LEQTKTRHLALNLQEKSKL--ESELANFGPRINDIKRIIQSREREMKDLKEKMNQV---- 772
Query: 427 RNSGAENIFEAYC 439
+ +FE +C
Sbjct: 773 ----EDEVFEEFC 781
>UNIPROTKB|O93308 [details] [associations]
symbol:smc1a "Structural maintenance of chromosomes protein
1A" species:8355 "Xenopus laevis" [GO:0000075 "cell cycle
checkpoint" evidence=ISS] [GO:0000776 "kinetochore" evidence=ISS]
[GO:0003682 "chromatin binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0007126 "meiosis" evidence=ISS] [GO:0009314
"response to radiation" evidence=ISS] [GO:0030893 "meiotic cohesin
complex" evidence=ISS] [GO:0042770 "signal transduction in response
to DNA damage" evidence=ISS] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0007126
GO:GO:0000776 GO:GO:0051301 GO:GO:0007067 GO:GO:0006281
GO:GO:0003682 GO:GO:0042770 GO:GO:0006310 GO:GO:0030261
GO:GO:0009314 GO:GO:0000075 GO:GO:0007062 SUPFAM:SSF75553
GO:GO:0030893 HOVERGEN:HBG039593 EMBL:AF051784
RefSeq:NP_001165905.1 UniGene:Xl.4734 ProteinModelPortal:O93308
IntAct:O93308 GeneID:100379087 KEGG:xla:100379087 CTD:100379087
Uniprot:O93308
Length = 1232
Score = 132 (51.5 bits), Expect = 2.2e-10, Sum P(3) = 2.2e-10
Identities = 61/222 (27%), Positives = 101/222 (45%)
Query: 26 IELHNFMTFD-HLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI---- 80
IE+ NF ++ I P R +IGPNGSGKS+L+ AI+ LG T L R ++
Sbjct: 7 IEIENFKSYKGRQIIGPFHRFTAIIGPNGSGKSNLMDAISFVLGEKTSNL-RVKTLRDLI 65
Query: 81 -GAYV-KRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKR 138
GA V K ++ + D+ EE + ++ SE+ N KVV E + ++
Sbjct: 66 HGAPVGKPAANRAFVSMVYSEDSGEEK--VFSRVIVGGSSEYKINNKVVQLSEYSDSLEK 123
Query: 139 FNIQVNNLTQFLPQDRVCEFAKLSPVK---LLEETEKAVGDPQLPVQHCALVEKSSKLKT 195
I + + Q V A +P + L EE ++ G+ L ++ K K
Sbjct: 124 LGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRS-GE---------LAQEYDKRKK 173
Query: 196 IECTVKRNGDT-LNQLKALNVEQE-KDVERVRQRAELLEKVE 235
E VK DT N + N+ E K+ ++ ++ AE ++++
Sbjct: 174 -EM-VKAEEDTQFNYHRKKNIAAERKEAKQEKEEAERYQRLK 213
Score = 118 (46.6 bits), Expect = 2.2e-10, Sum P(3) = 2.2e-10
Identities = 83/393 (21%), Positives = 166/393 (42%)
Query: 643 MQT-EQRLIED--EAAKLQKEREEIINIV-----QIEKRKRREM--ENHINLRKRKLESI 692
+QT EQ + +D E KL+KE + + I+ Q++ K + + ++ +N + +E I
Sbjct: 835 VQTWEQSVKKDDNEIEKLKKEEQRHMKIIDETMAQLQDLKNQHLAKKSEVNDKNHLMEDI 894
Query: 693 EKE-DDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKI 751
K+ N + L + + + + + NLL +CK S + ++ D
Sbjct: 895 RKKLGSANKEVTHLQKEVTAIETKLEQKRSDRHNLLQ---ACKMSDIKLPLSKGTMDDIS 951
Query: 752 RELEFNLKQHEKLALQAS--LHYEDCKKEVEHC--RKHLSDAKRQAESIAFITPELEKEF 807
+E + + + Q S ++ ++ E+++ + L DA + I L ++
Sbjct: 952 QEEGSSQGEESASSSQRSSTVYAKEALIEIDYSDLSEDLKDAVAD-DDIKQEMSALHQKI 1010
Query: 808 LEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFL 867
E + ++ + A + + S+ Q E+E +++ + E KKE RF
Sbjct: 1011 NEQQSILQRISAPNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQTKKE--RF- 1067
Query: 868 AEIDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVK-FR 926
D + N + +I + SRN A G + +E D + + K FR
Sbjct: 1068 ---DRFNACFESVATN-IDEIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFR 1123
Query: 927 QSGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLV 986
L SGGE++V+ + L ++ PF V+DEI+ +D N K+ +
Sbjct: 1124 PMDNL--------SGGEKTVAALALLFAIHSYKPSPFFVLDEIDAALDNTNIGKV-ANYI 1174
Query: 987 RAASQPNTPQCFLLTPKLLPDLEYSEACSILNI 1019
+ S N Q +++ L + Y++A S++ +
Sbjct: 1175 KEQSMSNF-QAIVIS---LKEEFYTKAESLIGV 1203
Score = 91 (37.1 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 48/218 (22%), Positives = 98/218 (44%)
Query: 651 EDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKE-DDINTALAKLVDQA 709
E + AK +KE E + ++ K I L+ KL E E + +N L+ + ++
Sbjct: 195 ERKEAKQEKEEAE-----RYQRLKDEVARAQIQLQLFKLYHNESEIEKLNKELS-VKNKG 248
Query: 710 ADLNIQQF-KYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQA 768
+ + + K E+K+ E+ + +IE + K ++ E N K + + +
Sbjct: 249 IEKDKKHMDKVEEELKDKKKELGKMM-----REQQAIEKEIKEKDAELNQKLPQYIKAKE 303
Query: 769 SLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQA 828
+ ++ K+ +K L +A++Q + ELEKE L + +E E +++
Sbjct: 304 NPSHKI--KKFRAAKKSLQNAQKQYKKRKADMDELEKEMLSVEKARQEFEERMEEESQSQ 361
Query: 829 NSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRF 866
L +N +++Y HR + E+ S + +EL++F
Sbjct: 362 GRDLTLEENQVKKY-HRLK--EEASKRAATLAQELEKF 396
Score = 72 (30.4 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 73/342 (21%), Positives = 148/342 (43%)
Query: 654 AAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAA--D 711
A + K ++E+ V+ E+ + N+ + E+ +++++ +L D+ A
Sbjct: 165 AQEYDKRKKEM---VKAEEDTQFNYHRKKNIAAERKEAKQEKEEAER-YQRLKDEVARAQ 220
Query: 712 LNIQQFK-Y--AIEIKNLLVEIVSCKWSYAEK---HMASIEFDAKIRELEFNLKQHEKLA 765
+ +Q FK Y EI+ L E+ S K EK HM +E + K ++ E E+ A
Sbjct: 221 IQLQLFKLYHNESEIEKLNKEL-SVKNKGIEKDKKHMDKVEEELKDKKKELGKMMREQQA 279
Query: 766 LQASLHYEDCK--KEVEHCRKHLSDAKRQAESIAFITPELE---KEFLEMPTTIEELEAA 820
++ + +D + +++ K + + + L+ K++ + ++ELE
Sbjct: 280 IEKEIKEKDAELNQKLPQYIKAKENPSHKIKKFRAAKKSLQNAQKQYKKRKADMDELEKE 339
Query: 821 IQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPT 880
+ ++ +A F + ++E Q Q DL T +E K+ R E K T
Sbjct: 340 ML-SVEKARQEF---EERMEE--ESQSQGRDL-TLEENQVKKYHRLKEEAS----KRAAT 388
Query: 881 LRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQ--LEVLSAHH 938
L AQ E F+R+ + A + L+E + + I K++ + Q +E L +
Sbjct: 389 L----AQELEKFNRD--QKADQDRLDLEERKKVETEAKIKQKLRELEENQKRIEKLEEYI 442
Query: 939 QSGGERSVSTILYLV-SLQDLTNCPFRVVDEINQGMDPINER 979
+ ++S+ L +L + R +DEIN ++ + E+
Sbjct: 443 ATS-KQSLEEQKNLEETLTEEVEMAKRRIDEINSELNQVMEQ 483
Score = 71 (30.1 bits), Expect = 4.5e-06, Sum P(3) = 4.5e-06
Identities = 40/183 (21%), Positives = 81/183 (44%)
Query: 646 EQRLIEDEAAKLQKEREEIINIVQIEKRK------RREMENHINLRKRKLESIE----KE 695
E++ +E EA QK RE N +IEK + ++ +E NL + E +E +
Sbjct: 411 ERKKVETEAKIKQKLRELEENQKRIEKLEEYIATSKQSLEEQKNLEETLTEEVEMAKRRI 470
Query: 696 DDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIV-SCKWSYAEKHMASIEFDAKIREL 754
D+IN+ L ++++Q D I + + + + + EI+ S K Y + + +
Sbjct: 471 DEINSELNQVMEQLGDARIDRQESSRQQRK--AEIMESIKRLYPGSVYGRLIDLCQPTQK 528
Query: 755 EFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTI 814
++ + + L D +K C +++ + + + E+ L ++LE+ T
Sbjct: 529 KYQIAVTKVLGKNMDAIIVDSEKTGRDCIQYIKEQRGEPETF------LPLDYLEVKPTD 582
Query: 815 EEL 817
E L
Sbjct: 583 ERL 585
Score = 68 (29.0 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 32/133 (24%), Positives = 61/133 (45%)
Query: 108 IMRKIDTRNKSEWFFNGKVVP-KGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKL 166
I R I +R++ K+ + EV E R I V N+ +F +++V +++ +L
Sbjct: 751 IKRIIQSRDREMKDLKEKMNQVEDEVFEEFCR-EIGVRNIREF-EEEKVKRQNEIAKKRL 808
Query: 167 LEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQ 226
E +K QL + L E K++T E +VK++ + + +LK K ++
Sbjct: 809 EFENQKTRLGIQLDYEKNQLKEDQGKVQTWEQSVKKDDNEIEKLKKEEQRHMKIIDETMA 868
Query: 227 RAELLEKVESMKK 239
+ + L+ KK
Sbjct: 869 QLQDLKNQHLAKK 881
Score = 66 (28.3 bits), Expect = 5.3e-07, Sum P(4) = 5.3e-07
Identities = 56/277 (20%), Positives = 116/277 (41%)
Query: 750 KIRELEFNLKQHEKLALQA---SLHYEDCKKEVEHCRKHLSDAKRQAESIAF-ITPELEK 805
K R L N+++ KL + S D K+ ++ + + D K + + + E +
Sbjct: 723 KTRHLAMNMQEKSKLESELANFSPRINDIKRIIQSRDREMKDLKEKMNQVEDEVFEEFCR 782
Query: 806 EF-LEMPTTIEELEAAIQDNISQANSIFFLNQNILQ--EYEHRQRQIEDLSTKQEADKKE 862
E + EE + Q+ I++ + F NQ + ++ + Q+++ K + ++
Sbjct: 783 EIGVRNIREFEEEKVKRQNEIAKKR-LEFENQKTRLGIQLDYEKNQLKEDQGKVQTWEQS 841
Query: 863 LKRFLAEIDALK---EKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEH--ESDFDKF 917
+K+ EI+ LK ++ + + +AQ+ + +N Q +A EV+ H E K
Sbjct: 842 VKKDDNEIEKLKKEEQRHMKIIDETMAQLQDL--KN-QHLAKKSEVNDKNHLMEDIRKKL 898
Query: 918 GILIK-VKFRQSGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQG-MDP 975
G K V Q + + Q +R +L + D+ P +++G MD
Sbjct: 899 GSANKEVTHLQKEVTAIETKLEQKRSDRH--NLLQACKMSDI-KLP------LSKGTMDD 949
Query: 976 INERKMFQQLVRAASQPNTPQCFLLTPKLLPDLEYSE 1012
I++ + Q +AS L+ +++YS+
Sbjct: 950 ISQEEGSSQGEESASSSQRSSTVYAKEALI-EIDYSD 985
Score = 65 (27.9 bits), Expect = 1.8e-05, Sum P(3) = 1.8e-05
Identities = 73/364 (20%), Positives = 145/364 (39%)
Query: 648 RLIEDEAAKLQKEREEIINIVQ-IEKRKRRE--MENHINLRKRKLESIEKEDDINTALAK 704
R +E+ +++K E I Q +E++K E + + + KR+++ I E +N + +
Sbjct: 426 RELEENQKRIEKLEEYIATSKQSLEEQKNLEETLTEEVEMAKRRIDEINSE--LNQVMEQ 483
Query: 705 LVDQAADL---NIQQFKYAI--EIKNL--------LVEI---VSCKWSYAE-----KHMA 743
L D D + QQ K I IK L L+++ K+ A K+M
Sbjct: 484 LGDARIDRQESSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGKNMD 543
Query: 744 SIEFDAKI--RE-LEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFIT 800
+I D++ R+ +++ +Q + L Y + K E R+ L AK + I +
Sbjct: 544 AIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDERLRE-LKGAKLVIDVIRYEP 602
Query: 801 PELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADK 860
P ++K L+ A + DN+ A I F H+ ++ ++
Sbjct: 603 PHIKKA-LQYACG----NALVCDNVEDARRIAFGGHQ-----RHKTVALDGTLFQKSG-- 650
Query: 861 KELKRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGIL 920
+ +++ A +W + + + E + +E A + + G+
Sbjct: 651 -VISGGASDLKAKARRWDEKAVDKLKEKKERLTEELKEQMKAKRKEAELRQVQSQAHGLQ 709
Query: 921 IKVKFRQSGQLEVLSAHHQSGGERSVSTI-LYLVSLQDLTNCPFRVVDEINQGMDPINER 979
+++K+ QS LE H + + S + L + N R++ ++ M + E
Sbjct: 710 MRLKYSQS-DLEQTKTRHLAMNMQEKSKLESELANFSPRINDIKRIIQSRDREMKDLKE- 767
Query: 980 KMFQ 983
KM Q
Sbjct: 768 KMNQ 771
Score = 58 (25.5 bits), Expect = 5.3e-07, Sum P(4) = 5.3e-07
Identities = 28/127 (22%), Positives = 61/127 (48%)
Query: 650 IEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLES----IEK-EDDINTALAK 704
+ E K ++++ + + +E+RK+ E E I + R+LE IEK E+ I T+
Sbjct: 389 LAQELEKFNRDQKADQDRLDLEERKKVETEAKIKQKLRELEENQKRIEKLEEYIATSKQS 448
Query: 705 LVDQAADLNIQQ-FKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEK 763
L +Q N+++ +E+ ++ ++ + + + + DA+I E + +Q K
Sbjct: 449 LEEQK---NLEETLTEEVEMAKRRIDEINSELNQVMEQLG----DARIDRQESS-RQQRK 500
Query: 764 LALQASL 770
+ S+
Sbjct: 501 AEIMESI 507
Score = 56 (24.8 bits), Expect = 0.00026, Sum P(4) = 0.00026
Identities = 28/151 (18%), Positives = 61/151 (40%)
Query: 643 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHIN-LRKRKLESIEKEDDINTA 701
MQ + +L E E A +I I+Q R+ ++++ +N + E +E +
Sbjct: 731 MQEKSKL-ESELANFSPRINDIKRIIQSRDREMKDLKEKMNQVEDEVFEEFCREIGVRN- 788
Query: 702 LAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQH 761
+ + ++ + K +E +N + + Y EK+ E K++ E ++K+
Sbjct: 789 IREFEEEKVKRQNEIAKKRLEFENQKTRL-GIQLDY-EKNQLK-EDQGKVQTWEQSVKKD 845
Query: 762 EKLALQASLHYEDCKKEVEHCRKHLSDAKRQ 792
+ + + K ++ L D K Q
Sbjct: 846 DNEIEKLKKEEQRHMKIIDETMAQLQDLKNQ 876
Score = 44 (20.5 bits), Expect = 2.5e-10, Sum P(4) = 2.5e-10
Identities = 13/66 (19%), Positives = 32/66 (48%)
Query: 363 YEPPHDKIEKLGSQILELGVQANQKRLQKSEKE-----KILNQNKLTLRQCSDRLKDMED 417
Y+ D++ + Q+ + N+ ++K KE K + ++K + + + LKD +
Sbjct: 209 YQRLKDEVARAQIQLQLFKLYHNESEIEKLNKELSVKNKGIEKDKKHMDKVEEELKDKKK 268
Query: 418 KNNKLL 423
+ K++
Sbjct: 269 ELGKMM 274
Score = 40 (19.1 bits), Expect = 2.2e-10, Sum P(3) = 2.2e-10
Identities = 15/63 (23%), Positives = 28/63 (44%)
Query: 383 QANQKRLQKSEKEKILNQNKLTLRQCSDRLKDME------DKNNKLLHALRNSGAENIFE 436
Q + L + +EK +++L S R+ D++ D+ K L N + +FE
Sbjct: 721 QTKTRHLAMNMQEKSKLESELA--NFSPRINDIKRIIQSRDREMKDLKEKMNQVEDEVFE 778
Query: 437 AYC 439
+C
Sbjct: 779 EFC 781
Score = 40 (19.1 bits), Expect = 2.2e-10, Sum P(3) = 2.2e-10
Identities = 18/75 (24%), Positives = 38/75 (50%)
Query: 379 ELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKL---LHALRNSGAENIF 435
E+GV + +++ E+EK+ QN++ + RL + E++ +L L +N E+
Sbjct: 783 EIGV----RNIREFEEEKVKRQNEIAKK----RL-EFENQKTRLGIQLDYEKNQLKEDQG 833
Query: 436 EAYCWLQQHRHELNK 450
+ W Q + + N+
Sbjct: 834 KVQTWEQSVKKDDNE 848
Score = 40 (19.1 bits), Expect = 2.5e-10, Sum P(4) = 2.5e-10
Identities = 18/70 (25%), Positives = 32/70 (45%)
Query: 489 GDRDFLAKNLKPFDVPILNYVSNESSRKEPFQISEEMRALGISARLDQVFDAPHAVKEVL 548
G D AK + +D ++ + + R ++ E+M+A A L QV H ++ L
Sbjct: 655 GASDLKAK-ARRWDEKAVDKLKEKKERLTE-ELKEQMKAKRKEAELRQVQSQAHGLQMRL 712
Query: 549 -ISQFGLDSS 557
SQ L+ +
Sbjct: 713 KYSQSDLEQT 722
Score = 37 (18.1 bits), Expect = 1.2e-09, Sum P(4) = 1.2e-09
Identities = 10/34 (29%), Positives = 19/34 (55%)
Query: 390 QKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLL 423
Q+ E E L + L ++ +RL+++ K KL+
Sbjct: 563 QRGEPETFLPLDYLEVKPTDERLREL--KGAKLV 594
>WB|WBGene00001860 [details] [associations]
symbol:him-1 species:6239 "Caenorhabditis elegans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005694 "chromosome"
evidence=IEA] [GO:0051276 "chromosome organization" evidence=IEA]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0007064 "mitotic
sister chromatid cohesion" evidence=ISS] [GO:0007059 "chromosome
segregation" evidence=IMP] [GO:0009790 "embryo development"
evidence=IMP] [GO:0010165 "response to X-ray" evidence=IMP]
[GO:0009411 "response to UV" evidence=IMP] [GO:0008278 "cohesin
complex" evidence=ISS;IPI] [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0003677 "DNA
binding" evidence=IDA] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0009792 GO:GO:0006898
GO:GO:0040007 GO:GO:0009411 GO:GO:0002119 GO:GO:0003677
GO:GO:0006281 GO:GO:0040011 GO:GO:0000790 GO:GO:0006310
GO:GO:0040035 GO:GO:0030261 GO:GO:0010165 GO:GO:0007064
GO:GO:0008278 eggNOG:COG1196 SUPFAM:SSF75553 HOGENOM:HOG000195481
KO:K06636 OMA:NALVCET GeneTree:ENSGT00580000081569 EMBL:FO081198
RefSeq:NP_001040658.2 UniGene:Cel.5375 ProteinModelPortal:O01789
SMR:O01789 STRING:O01789 PaxDb:O01789 EnsemblMetazoa:F28B3.7a.1
EnsemblMetazoa:F28B3.7a.2 GeneID:172116 KEGG:cel:CELE_F28B3.7
UCSC:F28B3.7a.1 CTD:172116 WormBase:F28B3.7a InParanoid:O01789
NextBio:874073 ArrayExpress:O01789 Uniprot:O01789
Length = 1262
Score = 122 (48.0 bits), Expect = 2.6e-10, Sum P(3) = 2.6e-10
Identities = 82/403 (20%), Positives = 173/403 (42%)
Query: 645 TEQ---RLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTA 701
TEQ R +E E K+ + + ++ + EK ++ H ++ E +E++ ++
Sbjct: 841 TEQDGNRKVEVEKEKVSQIDRQYKDMKKKEKTAAAALKEHTESMEQDKEVLEEKKALSHK 900
Query: 702 LA---KLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKH--MASIEF--------D 748
L V + A + ++ F A E + L +E + K Y E+H + S++
Sbjct: 901 LETEWNEVKKIAQVAMKDFTKA-EKELLRLESLLTKKQY-ERHSLLHSVKLGQIALPLKS 958
Query: 749 AKIRELEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKE-- 806
+ ++E+ + A Q+S D E + K +S+ +++ +
Sbjct: 959 GSMADVEYEEDDGDDTASQSSQSATDGPSVSEEQIQREQHIKINYDSLPREYKDVDDDDG 1018
Query: 807 FLEMPTTIE-ELEAAIQDNISQANSIFF-LNQNILQEYEHRQRQIEDLSTKQEADKKELK 864
+M + E++ +Q N+S+ N+ NQ + + E E+L ++ K+ +
Sbjct: 1019 VRQMSNRLNVEIDE-LQKNVSKMNAPNLKANQRMAEVKEREAESTEELENARKKAKRIRQ 1077
Query: 865 RF-LAEIDALK--EKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILI 921
+F + D + + + + N + I + SRN A G +++E D ++ +
Sbjct: 1078 QFEKVKTDRYRRFQDFFDPVANTIDDIYKQLSRNTSAQAFLGADNMEEPYLDGIQYNCVA 1137
Query: 922 KVK-FRQSGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERK 980
K FR L SGGE++++ + L ++ PF V+DEI+ +D N K
Sbjct: 1138 PGKRFRPMDNL--------SGGEKTIAALALLFAVHGRNPAPFFVLDEIDAALDNTNIGK 1189
Query: 981 MFQQLVRAASQPNTPQCFLLTPKLLPDLEYSEACSILNIMNGP 1023
+ + +A + Q +++ L + Y++A S++ I P
Sbjct: 1190 VASYICESAREHM--QIIVIS---LKEEFYNKADSLIGIFPYP 1227
Score = 110 (43.8 bits), Expect = 2.6e-10, Sum P(3) = 2.6e-10
Identities = 58/230 (25%), Positives = 103/230 (44%)
Query: 21 GNIIEIELHNFMTFD--HLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGD-TQLLGR- 76
G + +E+ NF ++ H I P +R +IGPNGSGKS+L+ AI+ LG + L R
Sbjct: 14 GTLHTLEIENFKSYKGKHTI-GPFTRFTAIIGPNGSGKSNLMDAISFVLGEKPSSLRVRK 72
Query: 77 -ATSI-GAYVKRG-EESGYIKISLR-GDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEV 132
A I GA + + + + ++ + D K + T R ++ SE +G+ V
Sbjct: 73 YADLIHGAPINKPVAKKCRVTMNYKYSDGKVKAFT--RGVNN-GTSEHLLDGQTVTSAAY 129
Query: 133 LEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSK 192
+ + NI + + Q + A +P + + E+ + ++ +
Sbjct: 130 SQEMESINIFIKARNFLVYQGAIENIAMKTPKERTQLFEELSRSHEFQAEY-------ER 182
Query: 193 LKTIECTVKRNGDTLNQL-KALNVEQEKDVERVRQRAELLEKVESMKKKL 241
LK +E T K DT + + K + QEK + + EK ++MK +L
Sbjct: 183 LK-VEMT-KAEDDTQHNMNKRRGIAQEK--REAKMEKDEAEKYQTMKNEL 228
Score = 76 (31.8 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 50/251 (19%), Positives = 111/251 (44%)
Query: 646 EQRLIEDEAAKLQKEREEI------INIVQIEKRKRR--EMENHINLRKRKLESIE---K 694
E ++ +DEA K Q + E+ + + Q+ +R E + IN +K+ + S+E
Sbjct: 210 EAKMEKDEAEKYQTMKNELAAKSTMLFLHQLFHCERTIDESKEEINAQKKTIASLEATRS 269
Query: 695 EDDINTALAKLVDQAADLNIQQFKYAIEIKNL-LVE----IVSCKWSYAEKHMASIEFDA 749
+++ A + A +Q+ ++ K L E +++ K S A +H +E
Sbjct: 270 KEEAKIAAVHQEHRKALREVQKMTRKLDQKETDLAEKQQNMLTLKVSVAHEHK-KLEIAK 328
Query: 750 KIRELEFNLKQHEKLALQASLHYEDCKKEVEHCRK----HLSDAKRQAESIAFITPELEK 805
K+ + ++ L A L + KKE+E + + D ++ E ++ E +
Sbjct: 329 KMLAAAESKAENNSTQL-ADL--KKSKKELEKKKAAYEAEIQDMMQRGE--LNLSDEQVR 383
Query: 806 EFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKR 865
E+ ++ + A +Q + A +F +++ L RQ++ ++ +E D + ++
Sbjct: 384 EYGQLKDQAQRESAMVQRELLMAEQVFEGDKSSLNHELRRQKEHQERVKAKEGDVRRIET 443
Query: 866 FLAEI-DALKE 875
+A + +KE
Sbjct: 444 QIATLAQRIKE 454
Score = 62 (26.9 bits), Expect = 0.00028, Sum P(3) = 0.00028
Identities = 60/318 (18%), Positives = 139/318 (43%)
Query: 651 EDEAAKLQKEREEIIN--IVQIEKRKRREME-----NHINLRKRKLESIEKEDDINTALA 703
+++ K +E+ +N I ++K +RRE+E + IN +++L +++ D+ +
Sbjct: 683 DEKVVKQLREKRNQLNEKIADLQKHRRRELEVESVRSKINGNEQRLAMMKR--DLKN-MR 739
Query: 704 KLVDQAADLNIQQFKYAIEIKNLLVEIVSC--KWSYAEKHMASIEFDAKIRELEFNLKQH 761
++ Q L + E+ L I +C K +E + S++ K E+ +
Sbjct: 740 EM--QLERLQNELEGMTAEMNMLPPRISNCQEKLERSESTLKSLQ--TKSNEVADRIFAD 795
Query: 762 --EKLALQASLHYED----CKKEVEH-CRKHLSDAKRQAESIAFITPELEKEFLEMPTT- 813
++ + + YE+ K+E+E R D ++ A I F+T + +E+
Sbjct: 796 FCTRVGIASIRDYENREMRIKQEMEDKLRSFDDDIQKLAYEIDFVTEQDGNRKVEVEKEK 855
Query: 814 IEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIED---LSTKQEADKKELKRFLAEI 870
+ +++ +D + + + + E + +E+ LS K E + E+K+ +A++
Sbjct: 856 VSQIDRQYKDMKKKEKTAAAALKEHTESMEQDKEVLEEKKALSHKLETEWNEVKK-IAQV 914
Query: 871 DALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQ 930
A+K+ + + L+ + + ++ ++ V L + K G + V++ +
Sbjct: 915 -AMKD-FTKAEKELLRLESLLTKKQYERHSLLHSVKLGQIALPL-KSGSMADVEYEEDDG 971
Query: 931 LEVLSAHHQSGGER-SVS 947
+ S QS + SVS
Sbjct: 972 DDTASQSSQSATDGPSVS 989
Score = 58 (25.5 bits), Expect = 2.6e-10, Sum P(3) = 2.6e-10
Identities = 30/115 (26%), Positives = 52/115 (45%)
Query: 367 HDKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLR-QCSDRLKDMEDKNNKLLHA 425
H + K ++ ++ + +QK +EK+ QN LTL+ + K +E K+L A
Sbjct: 279 HQEHRKALREVQKMTRKLDQKETDLAEKQ----QNMLTLKVSVAHEHKKLEIAK-KML-A 332
Query: 426 LRNSGAENIFEAYCWLQQHRHELNKE--AYGPVLLEVNVSNRAHANYLEDHVGHY 478
S AEN L++ + EL K+ AY + ++ R N ++ V Y
Sbjct: 333 AAESKAENNSTQLADLKKSKKELEKKKAAYEAEIQDM--MQRGELNLSDEQVREY 385
Score = 42 (19.8 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 10/36 (27%), Positives = 21/36 (58%)
Query: 390 QKSEK--EKILNQNKLTLRQCSDRLKDMEDKNNKLL 423
QKS+K EK++ Q + Q ++++ D++ + L
Sbjct: 677 QKSKKWDEKVVKQLREKRNQLNEKIADLQKHRRREL 712
>UNIPROTKB|E2QV07 [details] [associations]
symbol:SMC1A "Structural maintenance of chromosomes
protein" species:9615 "Canis lupus familiaris" [GO:0005634
"nucleus" evidence=IEA] [GO:0030261 "chromosome condensation"
evidence=IEA] [GO:0007062 "sister chromatid cohesion" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0005694 "chromosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR024704
InterPro:IPR010935 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0005634
GO:GO:0005694 GO:GO:0006281 GO:GO:0006310 GO:GO:0030261
GO:GO:0007062 SUPFAM:SSF75553 CTD:8243 KO:K06636 OMA:NALVCET
GeneTree:ENSGT00580000081569 EMBL:AAEX03026385 RefSeq:XP_538049.3
Ensembl:ENSCAFT00000025795 GeneID:480928 KEGG:cfa:480928
Uniprot:E2QV07
Length = 1233
Score = 124 (48.7 bits), Expect = 3.0e-10, Sum P(3) = 3.0e-10
Identities = 80/384 (20%), Positives = 166/384 (43%)
Query: 651 EDEAAKLQKEREEIINIV-----QIEKRKRREM--ENHINLRKRKLESIEKE-DDINTAL 702
E+E KL+KE + + I+ Q++ K + + ++ +N + ++E I K+ N +
Sbjct: 846 ENEIEKLKKEEQRHMKIIDETMAQLQDLKNQHLAKKSEVNDKNHEMEEIRKKLGGANKEM 905
Query: 703 AKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHE 762
L + + + + + NLL +CK + ++ D I + E + + +
Sbjct: 906 THLQKEVTAIETKLEQKRSDRHNLLQ---ACKMQDIKLPLSKGTMD-DISQEEGSSQGED 961
Query: 763 KLA---LQASLHYEDCKKEVEH---CRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEE 816
++ +S++ + E+++ C + L DA+ + E I L+++ E + ++
Sbjct: 962 SVSGSQRTSSIYAREALIEIDYGDLC-EDLKDAQAE-EEIKQEMNTLQQKLNEQQSVLQR 1019
Query: 817 LEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEK 876
+ A + + S+ Q E+E +++ + E KKE RF D
Sbjct: 1020 IAAPNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKE--RF----DRFNAC 1073
Query: 877 WLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVK-FRQSGQLEVLS 935
+ N + +I + SRN A G + +E D + + K FR L
Sbjct: 1074 FESVATN-IDEIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNL---- 1128
Query: 936 AHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTP 995
SGGE++V+ + L ++ PF V+DEI+ +D N K+ ++ S N
Sbjct: 1129 ----SGGEKTVAALALLFAIHSYKPAPFFVLDEIDAALDNTNIGKV-ANYIKEQSTCNF- 1182
Query: 996 QCFLLTPKLLPDLEYSEACSILNI 1019
Q +++ L + Y++A S++ +
Sbjct: 1183 QAIVIS---LKEEFYTKAESLIGV 1203
Score = 122 (48.0 bits), Expect = 3.0e-10, Sum P(3) = 3.0e-10
Identities = 62/222 (27%), Positives = 100/222 (45%)
Query: 26 IELHNFMTFD-HLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI---- 80
IE+ NF ++ I P R +IGPNGSGKS+L+ AI+ LG T L R ++
Sbjct: 7 IEIENFKSYKGRQIIGPFQRFTAIIGPNGSGKSNLMDAISFVLGEKTSNL-RVKTLRDLI 65
Query: 81 -GAYV-KRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKR 138
GA V K ++ + + E+ T R I SE+ N KVV E E ++
Sbjct: 66 HGAPVGKPAANRAFVSMVYSEEGAEDR-TFARVI-VGGSSEYKINNKVVQLHEYSEELEK 123
Query: 139 FNIQVNNLTQFLPQDRVCEFAKLSPVK---LLEETEKAVGDPQLPVQHCALVEKSSKLKT 195
I + + Q V A +P + L EE ++ G+ L ++ K K
Sbjct: 124 LGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRS-GE---------LAQEYDKRKK 173
Query: 196 IECTVKRNGDT-LNQLKALNVEQE-KDVERVRQRAELLEKVE 235
E VK DT N + N+ E K+ ++ ++ A+ ++++
Sbjct: 174 -EM-VKAEEDTQFNYHRKKNIAAERKEAKQEKEEADRYQRLK 213
Score = 98 (39.6 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 57/271 (21%), Positives = 118/271 (43%)
Query: 654 AAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKE-DDINTALAKLVDQAADL 712
AA+ ++ ++E + ++ K + + L+ KL E E + +N LA +
Sbjct: 193 AAERKEAKQEKEEADRYQRLKDEVVRAQVQLQLFKLYHNEVEIEKLNKELASKNKEIEKD 252
Query: 713 NIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHY 772
+ K E+K E+ + IE + K ++ E N K+ + + + + +
Sbjct: 253 KKRMDKVEDELKEKKKELGKMM-----REQQQIEKEIKEKDSELNQKRPQYIKAKENTSH 307
Query: 773 EDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIF 832
+ K++E +K L +A++ + ELEKE L + +E E +++
Sbjct: 308 KI--KKLEAAKKSLQNAQKHYKKRKGDMDELEKEMLSVEKARQEFEERMEEESQSQGRDL 365
Query: 833 FLNQNILQEYEHRQRQIEDLSTKQEADKKELKRF----LAEIDAL---KEKWLPT---LR 882
L +N +++Y HR + E+ S + +EL++F A+ D L + K + T ++
Sbjct: 366 TLEENQVKKY-HRLK--EEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAKIK 422
Query: 883 NLVAQINETFSR--NFQEMAVAGEVSLDEHE 911
+ +I E R +E + SL+E +
Sbjct: 423 QKLREIEENQKRIEKLEEYITTSKQSLEEQK 453
Score = 90 (36.7 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 52/272 (19%), Positives = 123/272 (45%)
Query: 651 EDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAA 710
E E KL KE ++ +K++ ++E+ + +K++L + +E ++ ++ +
Sbjct: 232 EVEIEKLNKELASKNKEIEKDKKRMDKVEDELKEKKKELGKMMREQQ--QIEKEIKEKDS 289
Query: 711 DLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQ-AS 769
+LN ++ +Y +N +I K A+K + + + K R+ + + + E L+++ A
Sbjct: 290 ELNQKRPQYIKAKENTSHKIK--KLEAAKKSLQNAQKHYKKRKGDMDELEKEMLSVEKAR 347
Query: 770 LHYEDCKKEVEHCR-KHLSDAKRQAESIAFITPELEKEFLEMPTTIEEL---EAAIQDNI 825
+E+ +E + + L+ + Q + + E K + +E+ + A QD +
Sbjct: 348 QEFEERMEEESQSQGRDLTLEENQVKKYHRLKEEASKRAATLAQELEKFNRDQKADQDRL 407
Query: 826 S-----QANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPT 880
+ + + Q L+E E Q++IE L K+ L+ L E+ +
Sbjct: 408 DLEERKKVETEAKIKQK-LREIEENQKRIEKLEEYITTSKQSLEEQKKLEGELTEE-VEM 465
Query: 881 LRNLVAQINETFSRNFQEMAVAGEVSLDEHES 912
+ + +IN+ ++ +++ G+ +D ES
Sbjct: 466 AKRRIDEINKELNQVMEQL---GDARIDRQES 494
Score = 86 (35.3 bits), Expect = 7.1e-07, Sum P(2) = 7.1e-07
Identities = 55/261 (21%), Positives = 118/261 (45%)
Query: 650 IEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQA 709
+EDE + +KE +++ Q +++ +E ++ +N +KR + I+ +++ + + KL
Sbjct: 259 VEDELKEKKKELGKMMREQQQIEKEIKEKDSELN-QKRP-QYIKAKENTSHKIKKLEAAK 316
Query: 710 ADLNIQQFKYAI------EIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFN-LKQHE 762
L Q Y E++ ++ + + + E+ + + LE N +K++
Sbjct: 317 KSLQNAQKHYKKRKGDMDELEKEMLSVEKARQEFEERMEEESQSQGRDLTLEENQVKKYH 376
Query: 763 KLALQASLHYEDCKKEVEHC-RKHLSDAKR-------QAESIAFITPELEKEFLEMPTTI 814
+L +AS +E+E R +D R + E+ A I +L +E E I
Sbjct: 377 RLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAKIKQKL-REIEENQKRI 435
Query: 815 EELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEI-DAL 873
E+LE I + L + +E E +R+I++++ KEL + + ++ DA
Sbjct: 436 EKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEIN-------KELNQVMEQLGDAR 488
Query: 874 KEKWLPTLRNLVAQINETFSR 894
++ + + A+I E+ R
Sbjct: 489 IDRQESSRQQRKAEIMESIKR 509
Score = 73 (30.8 bits), Expect = 2.4e-05, Sum P(3) = 2.4e-05
Identities = 33/138 (23%), Positives = 61/138 (44%)
Query: 188 EKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYD 247
E +SK K IE KR ++LK E++K++ ++ + + +EK +K+K L +
Sbjct: 241 ELASKNKEIEKDKKRMDKVEDELK----EKKKELGKMMREQQQIEK--EIKEKDSEL--N 292
Query: 248 MKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENSK 307
K+ +YI +L K + +K GD +L + K
Sbjct: 293 QKRPQYIKAKENTSHKIKKLEAAKKSLQNAQKHYKKRK-------GDMDELEKEMLSVEK 345
Query: 308 RRMDFLEKVDQGVQVQGK 325
R +F E++++ Q QG+
Sbjct: 346 ARQEFEERMEEESQSQGR 363
Score = 70 (29.7 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 67/318 (21%), Positives = 129/318 (40%)
Query: 648 RLIEDEAAKLQKEREEIINIVQ-IEKRKRREME--NHINLRKRKLESIEKEDDINTALAK 704
R IE+ +++K E I Q +E++K+ E E + + KR+++ I KE +N + +
Sbjct: 426 REIEENQKRIEKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEINKE--LNQVMEQ 483
Query: 705 LVDQAADL---NIQQFKYAI--EIKNL--------LVEI---VSCKWSYAE-----KHMA 743
L D D + QQ K I IK L L+++ K+ A K+M
Sbjct: 484 LGDARIDRQESSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGKNMD 543
Query: 744 SIEFDAKI--RE-LEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFIT 800
+I D++ R+ +++ +Q + L Y + K E R+ L AK + I +
Sbjct: 544 AIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRE-LKGAKLVIDVIRYEP 602
Query: 801 PELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADK 860
P ++K L+ A + DN+ A I F H+ ++ ++
Sbjct: 603 PHIKKA-LQYACG----NALVCDNVEDARRIAFGGHQ-----RHKTVALDGTLFQKSG-- 650
Query: 861 KELKRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGIL 920
+ +++ A +W + + + E + +E A + + G+
Sbjct: 651 -VISGGASDLKAKARRWDEKAVDKLKEKKERLTEELKEQMKAKRKEAELRQVQSQAHGLQ 709
Query: 921 IKVKFRQSGQLEVLSAHH 938
+++K+ QS LE H
Sbjct: 710 MRLKYSQS-DLEQTKTRH 726
Score = 68 (29.0 bits), Expect = 0.00023, Sum P(3) = 0.00023
Identities = 37/174 (21%), Positives = 78/174 (44%)
Query: 750 KIRELEFNLKQHEKLALQ-ASL--HYEDCKKEVEHCRKHLSDAKRQAESIAF-ITPELEK 805
K R L NL++ KL + A+ D K+ ++ + + D K + + + E +
Sbjct: 723 KTRHLALNLQEKSKLESELANFGPRINDIKRIIQSREREMKDLKEKMNQVEDEVFEEFCR 782
Query: 806 EF-LEMPTTIEELEAAIQDNISQANSIFFLNQNILQ--EYEHRQRQIEDLSTKQEADKKE 862
E + EE + Q+ I++ + F NQ + + + Q+++ K ++
Sbjct: 783 EIGVRNIREFEEEKVKRQNEIAKKR-LEFENQKTRLGIQLDFEKNQLKEDQDKVHMWEQT 841
Query: 863 LKRFLAEIDALK---EKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESD 913
+K+ EI+ LK ++ + + +AQ+ + +N Q +A EV+ HE +
Sbjct: 842 VKKDENEIEKLKKEEQRHMKIIDETMAQLQDL--KN-QHLAKKSEVNDKNHEME 892
Score = 62 (26.9 bits), Expect = 0.00045, Sum P(3) = 0.00045
Identities = 25/108 (23%), Positives = 49/108 (45%)
Query: 134 EITKRF--NIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSS 191
E+ + F I V N+ +F +++V +++ +L E +K QL + L E
Sbjct: 775 EVFEEFCREIGVRNIREF-EEEKVKRQNEIAKKRLEFENQKTRLGIQLDFEKNQLKEDQD 833
Query: 192 KLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKK 239
K+ E TVK++ + + +LK K ++ + + L+ KK
Sbjct: 834 KVHMWEQTVKKDENEIEKLKKEEQRHMKIIDETMAQLQDLKNQHLAKK 881
Score = 58 (25.5 bits), Expect = 0.00071, Sum P(3) = 0.00071
Identities = 32/188 (17%), Positives = 81/188 (43%)
Query: 134 EITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKL 193
E +KR L +F +D+ + +L LEE +K + ++ + + E ++
Sbjct: 381 EASKRAATLAQELEKF-NRDQKADQDRLD----LEERKKVETEAKIKQKLREIEENQKRI 435
Query: 194 KTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEK-VESMKKKLPWLKYDMKKA- 251
+ +E + + +L + K L E ++VE ++R + + K + + ++L + D +++
Sbjct: 436 EKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEINKELNQVMEQLGDARIDRQESS 495
Query: 252 -EYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENSKRRM 310
+ L + +P + KK + A+ K + ++I ++ K
Sbjct: 496 RQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQ-KKYQIAVTKVLGKNMDAIIVDSEKTGR 554
Query: 311 DFLEKVDQ 318
D ++ + +
Sbjct: 555 DCIQYIKE 562
Score = 43 (20.2 bits), Expect = 3.0e-10, Sum P(3) = 3.0e-10
Identities = 18/75 (24%), Positives = 39/75 (52%)
Query: 379 ELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKL---LHALRNSGAENIF 435
E+GV + +++ E+EK+ QN++ + RL + E++ +L L +N E+
Sbjct: 783 EIGV----RNIREFEEEKVKRQNEIAKK----RL-EFENQKTRLGIQLDFEKNQLKEDQD 833
Query: 436 EAYCWLQQHRHELNK 450
+ + W Q + + N+
Sbjct: 834 KVHMWEQTVKKDENE 848
Score = 41 (19.5 bits), Expect = 0.00045, Sum P(3) = 0.00045
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 76 RATSIGAYVKRGEESGYIKISLRGDTKEEHLTIMRKIDTRNK 117
R + Y+ ++S + L G+ EE R+ID NK
Sbjct: 434 RIEKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEINK 475
Score = 40 (19.1 bits), Expect = 6.0e-10, Sum P(3) = 6.0e-10
Identities = 18/70 (25%), Positives = 32/70 (45%)
Query: 489 GDRDFLAKNLKPFDVPILNYVSNESSRKEPFQISEEMRALGISARLDQVFDAPHAVKEVL 548
G D AK + +D ++ + + R ++ E+M+A A L QV H ++ L
Sbjct: 655 GASDLKAK-ARRWDEKAVDKLKEKKERLTE-ELKEQMKAKRKEAELRQVQSQAHGLQMRL 712
Query: 549 -ISQFGLDSS 557
SQ L+ +
Sbjct: 713 KYSQSDLEQT 722
Score = 39 (18.8 bits), Expect = 7.5e-10, Sum P(3) = 7.5e-10
Identities = 16/73 (21%), Positives = 34/73 (46%)
Query: 370 IEKLGSQILELGVQANQKRLQKSEKEKI---LNQNKLTLRQCSDRLKDMEDKNNKLLHAL 426
+E+ ++ L L +Q K +SE +N K ++ +KD+++K N++
Sbjct: 719 LEQTKTRHLALNLQEKSKL--ESELANFGPRINDIKRIIQSREREMKDLKEKMNQV---- 772
Query: 427 RNSGAENIFEAYC 439
+ +FE +C
Sbjct: 773 ----EDEVFEEFC 781
Score = 37 (18.1 bits), Expect = 1.2e-09, Sum P(3) = 1.2e-09
Identities = 11/52 (21%), Positives = 29/52 (55%)
Query: 375 SQILELGVQANQKRLQKSEKEKILNQNKLTLRQCS---DRLKDMEDKNNKLL 423
+Q LG+Q + ++ Q E + ++ + T+++ ++LK E ++ K++
Sbjct: 812 NQKTRLGIQLDFEKNQLKEDQDKVHMWEQTVKKDENEIEKLKKEEQRHMKII 863
>CGD|CAL0000340 [details] [associations]
symbol:SMC2 species:5476 "Candida albicans" [GO:0003680 "AT
DNA binding" evidence=IEA] [GO:0000217 "DNA secondary structure
binding" evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0000939 "condensed chromosome inner kinetochore" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0000799 "nuclear condensin complex" evidence=IEA]
[GO:0070058 "tRNA gene clustering" evidence=IEA] [GO:0007076
"mitotic chromosome condensation" evidence=IEA] InterPro:IPR024704
InterPro:IPR010935 InterPro:IPR027120 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 CGD:CAL0000340
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0005694
GO:GO:0006281 GO:GO:0006310 GO:GO:0030261 GO:GO:0007062
eggNOG:COG1196 SUPFAM:SSF75553 EMBL:AACQ01000103 EMBL:AACQ01000102
KO:K06674 PANTHER:PTHR18937:SF9 RefSeq:XP_714465.1
RefSeq:XP_714514.1 ProteinModelPortal:Q59Y26 STRING:Q59Y26
GeneID:3643867 GeneID:3643918 KEGG:cal:CaO19.11106
KEGG:cal:CaO19.3623 Uniprot:Q59Y26
Length = 1171
Score = 128 (50.1 bits), Expect = 4.9e-10, Sum P(3) = 4.9e-10
Identities = 67/338 (19%), Positives = 148/338 (43%)
Query: 652 DEAAKLQKEREEIINIVQIEKRKRREMENHIN-LRKRKLESIEKEDDINT---ALAKLVD 707
D+ +K+ ++E+ ++ Q K +++EN + + +++S + + ++ AL +
Sbjct: 789 DKGSKINCLKKEVAHLKQQVISKEKQLENQTDKFQAAQIDSEQLKIELQNKQEALISTKN 848
Query: 708 QAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASI-EFDAKIRELEFNLK-QHEKLA 765
Q +L + K + K L+E ++ S + A++ D +I EL +K + EK+
Sbjct: 849 QIDELT-HKIKQQDQTKEQLIEQLTLVKSELDDARANLLGLDEEITELTNIVKLKIEKMT 907
Query: 766 LQASLHYEDCKKEVEHCRKHLSDAKRQAESIA-----FITPELEKEFLEMPTTIEELEAA 820
+ L + E+E + + K + + I + ++ ++ I+ E
Sbjct: 908 M-TKLDIQKLTHELEKSQNVTKNLKTRLDEIISEHEWVMDNQMVNNIMDQYPNIDIEETR 966
Query: 821 IQDNISQANSIFF---LNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKW 877
Q + Q +N NI+ E+ +++ L T + +K+ + + I+ L
Sbjct: 967 EQWELLQEKFSSMRRKVNVNIMSMIENVEKKETSLKTMVKTIEKDKNKIVNTINKLNGYK 1026
Query: 878 LPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHES-DFDKFGILIKVKFRQSGQLEVLSA 936
TL ++++ F F ++ L + D K G+ +KVK GQ+ S
Sbjct: 1027 RDTLNTTYQKVSKDFGAIFADLLPGSFAKLVPIDMMDVTK-GLEVKVKL---GQVWKESL 1082
Query: 937 HHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMD 974
SGG+RS+ + +++L P ++DE++ +D
Sbjct: 1083 VELSGGQRSLIALSLIMALLQFKPAPMYILDEVDAALD 1120
Score = 110 (43.8 bits), Expect = 4.9e-10, Sum P(3) = 4.9e-10
Identities = 36/147 (24%), Positives = 72/147 (48%)
Query: 43 SRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSIGAYV-KRGEESGYIKISL---- 97
++ N + G NGSGKS+++ AI LG + RA+++ + KRG+ +G K S+
Sbjct: 25 AQFNAITGLNGSGKSNILDAICFVLGIASMSTVRASNLQDLIYKRGQ-AGVTKASVTIVF 83
Query: 98 -RGDTKE-----EH---LTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQ 148
+ + E+ +++ R+I S++ NG + VL + + + +NN
Sbjct: 84 NNSEVSKSPIGFENCPTISVTRQIILGGTSKYLINGHKAQQQTVLNLFQSVQLNINNPNF 143
Query: 149 FLPQDRVCEFAKLSPVKLLEETEKAVG 175
+ Q ++ + + P ++L E+A G
Sbjct: 144 LIMQGKITKVLNMKPSEILSLIEEAAG 170
Score = 92 (37.4 bits), Expect = 2.3e-06, Sum P(3) = 2.3e-06
Identities = 44/212 (20%), Positives = 98/212 (46%)
Query: 712 LNIQQF-KYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASL 770
L +QQ+ K I++K + E+ + K + M S+ + + E NLK+HE L+ L
Sbjct: 679 LKLQQYNKLTIQLKKIEFELQNVKQELSR--MDSLISSTRTIQNEINLKRHELSLLEKKL 736
Query: 771 HYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQ-DNISQAN 829
++ + + R E I IT E +++ + IE+ A D S+ N
Sbjct: 737 ENNPAALILKQNDLNQQEIIRLTEEIE-ITKEKCRQYKQEIAIIEKDIAEFNNDKGSKIN 795
Query: 830 SIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLVAQIN 889
+ ++ Q+ +++Q+E+ + K +A + + ++ E+ +E + T +N + ++
Sbjct: 796 CLKKEVAHLKQQVISKEKQLENQTDKFQAAQIDSEQLKIELQNKQEALIST-KNQIDELT 854
Query: 890 ETFSRNFQ-EMAVAGEVSLDEHESDFDKFGIL 920
+ Q + + +++L + E D + +L
Sbjct: 855 HKIKQQDQTKEQLIEQLTLVKSELDDARANLL 886
Score = 77 (32.2 bits), Expect = 9.5e-05, Sum P(2) = 9.5e-05
Identities = 42/235 (17%), Positives = 101/235 (42%)
Query: 682 INLRKRKLESIEKEDDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKH 741
+N++ ++ S+ +E + D+A ++ EI+NLL E + K
Sbjct: 154 LNMKPSEILSLIEEAAGTRTFEERKDKAQKTMAKKEAKLTEIRNLLSEEIEPKLEKLRNE 213
Query: 742 MAS-IEFDAKIRELEFNLKQHEKLA-LQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFI 799
+ +EF ++ + +L EKL+ + A+ Y K H K L+D + + ++
Sbjct: 214 KRNFLEF----QQTQIDL---EKLSRIIAACDYTLLSKNFTHHSKFLNDHETKMNNLHLE 266
Query: 800 TPELEKEFLEMPTTIEELEAAIQDNISQANSI--FFLNQNILQEYEHRQRQIEDLSTKQE 857
+L E + ++++++ ++N+ S+ + +N L R D++
Sbjct: 267 VDKLNHEIKNLNEDLDQVKSRKEENLKTDGSMKELEIKENQLSNDLTRLNTARDIAMDNL 326
Query: 858 ADKKELK-RFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHE 911
++K + + +++ +K++ Q NE + ++ QE+ E ++ E
Sbjct: 327 TEEKNKHTKLIEQLEQIKQQLASNQTVFDNQENE-YKQSNQELVQLKEEYANKQE 380
Score = 77 (32.2 bits), Expect = 9.5e-05, Sum P(2) = 9.5e-05
Identities = 67/304 (22%), Positives = 128/304 (42%)
Query: 646 EQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHIN-LRKRKLESIE-KEDDINTALA 703
E+R +D+A K ++E + +I E+E + LR K +E ++ I+
Sbjct: 175 EER--KDKAQKTMAKKEA--KLTEIRNLLSEEIEPKLEKLRNEKRNFLEFQQTQIDLEKL 230
Query: 704 KLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEK 763
+ A D + + K L K + H+ + + +I+ L +L Q K
Sbjct: 231 SRIIAACDYTLLSKNFTHHSKFLNDH--ETKMN--NLHLEVDKLNHEIKNLNEDLDQ-VK 285
Query: 764 LALQASLHYEDCKKEVEHCRKHLS-DAKR--QAESIAF--ITPELEK--EFLEMPTTIEE 816
+ +L + KE+E LS D R A IA +T E K + +E I++
Sbjct: 286 SRKEENLKTDGSMKELEIKENQLSNDLTRLNTARDIAMDNLTEEKNKHTKLIEQLEQIKQ 345
Query: 817 LEAAIQDNI-SQANSIFFLNQNILQ---EYEHRQRQIEDLSTKQEADKKELKRFLAEIDA 872
A+ Q +Q N NQ ++Q EY ++Q + LST + + +++
Sbjct: 346 QLASNQTVFDNQENEYKQSNQELVQLKEEYANKQELLSTLSTGISSTGNVTSGYTTQLND 405
Query: 873 LKEKWLPTLRNLVAQINETFSRN-FQEMAVAGEVSLDEHESDFDKFGILIKV--KFRQSG 929
+K K L N + T N Q+ + ++ L + +++ + I++ +F ++
Sbjct: 406 VKSK-LNASENFIK--TSTLKINHLQQQMESDQMKLTKAKTENETLLSAIELHRQFIKTK 462
Query: 930 QLEV 933
QLE+
Sbjct: 463 QLEI 466
Score = 73 (30.8 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 40/210 (19%), Positives = 85/210 (40%)
Query: 106 LTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVK 165
+++ R+I S++ NG + VL + + + +NN + Q ++ + + P +
Sbjct: 101 ISVTRQIILGGTSKYLINGHKAQQQTVLNLFQSVQLNINNPNFLIMQGKITKVLNMKPSE 160
Query: 166 LLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRN--GDTLN-QLKALNVEQEKDVE 222
+L E+A G + +K+ K + T RN + + +L+ L E+ +E
Sbjct: 161 ILSLIEEAAGTRTFE-ERKDKAQKTMAKKEAKLTEIRNLLSEEIEPKLEKLRNEKRNFLE 219
Query: 223 RVRQRAELLEKVESMKKKLPWL---KYDMKKAEYIXXXXXXXXXXXXXXXXXN----TLH 275
+ + +L EK+ + + K ++++ N L+
Sbjct: 220 FQQTQIDL-EKLSRIIAACDYTLLSKNFTHHSKFLNDHETKMNNLHLEVDKLNHEIKNLN 278
Query: 276 EFSKPIEGKKQEKAILDGDCKKLSSLINEN 305
E ++ +K+E DG K+L I EN
Sbjct: 279 EDLDQVKSRKEENLKTDGSMKELE--IKEN 306
Score = 73 (30.8 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 40/173 (23%), Positives = 78/173 (45%)
Query: 656 KLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAADLNIQ 715
+LQ ++E+ + + R ++N INL++ +L +EK+ + N A L+ + DLN Q
Sbjct: 697 ELQNVKQELSRMDSLIS-STRTIQNEINLKRHELSLLEKKLENNPAA--LILKQNDLNQQ 753
Query: 716 QFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKL-ALQASL-HYE 773
+ E +EI K ++ +A IE D EFN + K+ L+ + H +
Sbjct: 754 EIIRLTEE----IEITKEKCRQYKQEIAIIEKDIA----EFNNDKGSKINCLKKEVAHLK 805
Query: 774 DC----KKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQ 822
+K++E+ A+ +E + ++ + I+EL I+
Sbjct: 806 QQVISKEKQLENQTDKFQAAQIDSEQLKIELQNKQEALISTKNQIDELTHKIK 858
Score = 49 (22.3 bits), Expect = 0.00090, Sum P(2) = 0.00090
Identities = 22/105 (20%), Positives = 48/105 (45%)
Query: 133 LEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSK 192
L+ + IQ+ + +F Q+ E +++ L+ T + L +L+EK +
Sbjct: 681 LQQYNKLTIQLKKI-EFELQNVKQELSRMD--SLISSTRTIQNEINLKRHELSLLEKKLE 737
Query: 193 LKTIECTVKRNGDTLNQLKALNVEQEKDV--ERVRQRAELLEKVE 235
+K+N LNQ + + + +E ++ E+ RQ + + +E
Sbjct: 738 NNPAALILKQND--LNQQEIIRLTEEIEITKEKCRQYKQEIAIIE 780
Score = 48 (22.0 bits), Expect = 4.9e-10, Sum P(3) = 4.9e-10
Identities = 14/70 (20%), Positives = 36/70 (51%)
Query: 187 VEKSSKLKTIECTVKRNGDTLNQLK-ALNVEQEKDVERVRQRAELLEKVESMKKKLPWLK 245
++ +K +E + + L +L A ++ + E + +L+E++E +K++L +
Sbjct: 292 LKTDGSMKELEIKENQLSNDLTRLNTARDIAMDNLTEEKNKHTKLIEQLEQIKQQLASNQ 351
Query: 246 --YDMKKAEY 253
+D ++ EY
Sbjct: 352 TVFDNQENEY 361
Score = 41 (19.5 bits), Expect = 2.5e-09, Sum P(3) = 2.5e-09
Identities = 20/69 (28%), Positives = 34/69 (49%)
Query: 367 HDKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHAL 426
H +++KL +I L +Q KS KE+ L + +K++E K N+L + L
Sbjct: 264 HLEVDKLNHEIKNLNEDLDQV---KSRKEENLKTD--------GSMKELEIKENQLSNDL 312
Query: 427 -RNSGAENI 434
R + A +I
Sbjct: 313 TRLNTARDI 321
>UNIPROTKB|O97593 [details] [associations]
symbol:SMC1A "Structural maintenance of chromosomes protein
1A" species:9913 "Bos taurus" [GO:0030893 "meiotic cohesin complex"
evidence=ISS] [GO:0007126 "meiosis" evidence=ISS] [GO:0009314
"response to radiation" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0000776 "kinetochore" evidence=ISS] [GO:0003682
"chromatin binding" evidence=ISS] [GO:0000075 "cell cycle
checkpoint" evidence=ISS] [GO:0042770 "signal transduction in
response to DNA damage" evidence=ISS] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0036033 "mediator
complex binding" evidence=IEA] [GO:0032876 "negative regulation of
DNA endoreduplication" evidence=IEA] [GO:0019827 "stem cell
maintenance" evidence=IEA] [GO:0007062 "sister chromatid cohesion"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030261 "chromosome condensation" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] InterPro:IPR024704
InterPro:IPR010935 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0005634
GO:GO:0007126 GO:GO:0005737 GO:GO:0000776 GO:GO:0051301
GO:GO:0007067 GO:GO:0006281 GO:GO:0003682 GO:GO:0042770
GO:GO:0006310 GO:GO:0030261 GO:GO:0009314 GO:GO:0032876
GO:GO:0000075 GO:GO:0007062 eggNOG:COG1196 SUPFAM:SSF75553
GO:GO:0030893 EMBL:AF072712 IPI:IPI00687474 PIR:S71602
RefSeq:NP_777039.1 UniGene:Bt.109789 ProteinModelPortal:O97593
STRING:O97593 PRIDE:O97593 GeneID:282370 KEGG:bta:282370 CTD:8243
HOGENOM:HOG000195481 HOVERGEN:HBG039593 InParanoid:O97593 KO:K06636
OrthoDB:EOG4HX507 NextBio:20806162 Uniprot:O97593
Length = 1233
Score = 122 (48.0 bits), Expect = 6.1e-10, Sum P(3) = 6.1e-10
Identities = 62/222 (27%), Positives = 100/222 (45%)
Query: 26 IELHNFMTFD-HLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI---- 80
IE+ NF ++ I P R +IGPNGSGKS+L+ AI+ LG T L R ++
Sbjct: 7 IEIENFKSYKGRQIIGPFQRFTAIIGPNGSGKSNLMDAISFVLGEKTSNL-RVKTLRDLI 65
Query: 81 -GAYV-KRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKR 138
GA V K ++ + + E+ T R I SE+ N KVV E E ++
Sbjct: 66 HGAPVGKPAANRAFVSMVYSEEGAEDR-TFARVI-VGGSSEYKINNKVVQLHEYSEELEK 123
Query: 139 FNIQVNNLTQFLPQDRVCEFAKLSPVK---LLEETEKAVGDPQLPVQHCALVEKSSKLKT 195
I + + Q V A +P + L EE ++ G+ L ++ K K
Sbjct: 124 LGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRS-GE---------LAQEYDKRKK 173
Query: 196 IECTVKRNGDT-LNQLKALNVEQE-KDVERVRQRAELLEKVE 235
E VK DT N + N+ E K+ ++ ++ A+ ++++
Sbjct: 174 -EM-VKAEEDTQFNYHRKKNIAAERKEAKQEKEEADRYQRLK 213
Score = 121 (47.7 bits), Expect = 6.1e-10, Sum P(3) = 6.1e-10
Identities = 79/384 (20%), Positives = 166/384 (43%)
Query: 651 EDEAAKLQKEREEIINIV-----QIEKRKRREM--ENHINLRKRKLESIEKE-DDINTAL 702
E+E KL+KE + + I+ Q++ K + + ++ +N + ++E I K+ N +
Sbjct: 846 ENEIEKLKKEEQRHMKIIDETMAQLQDLKNQHLAKKSEVNDKNHEMEEIRKKLGGANKEM 905
Query: 703 AKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHE 762
L + + + + + NLL +CK + ++ D I + E + + +
Sbjct: 906 THLQKEVTAIETKLEQKRSDRHNLLQ---ACKMQDIKLPLSKGTMD-DISQEEGSSQGED 961
Query: 763 KLA---LQASLHYEDCKKEVEH---CRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEE 816
++ ++++ + E+++ C + L DA+ + E I L+++ E + ++
Sbjct: 962 SVSGSQRTSNIYAREALIEIDYGDLC-EDLKDAQAE-EEIKQEMNTLQQKLNEQQSVLQR 1019
Query: 817 LEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEK 876
+ A + + S+ Q E+E +++ + E KKE RF D
Sbjct: 1020 IAAPNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKE--RF----DRFNAC 1073
Query: 877 WLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVK-FRQSGQLEVLS 935
+ N + +I + SRN A G + +E D + + K FR L
Sbjct: 1074 FESVATN-IDEIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNL---- 1128
Query: 936 AHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTP 995
SGGE++V+ + L ++ PF V+DEI+ +D N K+ ++ S N
Sbjct: 1129 ----SGGEKTVAALALLFAIHSYKPAPFFVLDEIDAALDNTNIGKV-ANYIKEQSTCNF- 1182
Query: 996 QCFLLTPKLLPDLEYSEACSILNI 1019
Q +++ L + Y++A S++ +
Sbjct: 1183 QAIVIS---LKEEFYTKAESLIGV 1203
Score = 98 (39.6 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 57/271 (21%), Positives = 118/271 (43%)
Query: 654 AAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKE-DDINTALAKLVDQAADL 712
AA+ ++ ++E + ++ K + + L+ KL E E + +N LA +
Sbjct: 193 AAERKEAKQEKEEADRYQRLKDEVVRAQVQLQLFKLYHNEVEIEKLNKELASKNKEIEKD 252
Query: 713 NIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHY 772
+ K E+K E+ + IE + K ++ E N K+ + + + + +
Sbjct: 253 KKRMDKVEDELKEKKKELGKMM-----REQQQIEKEIKEKDSELNQKRPQYIKAKENTSH 307
Query: 773 EDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIF 832
+ K++E +K L +A++ + ELEKE L + +E E +++
Sbjct: 308 KI--KKLEAAKKSLQNAQKHYKKRKGDMDELEKEMLSVEKARQEFEERMEEESQSQGRDL 365
Query: 833 FLNQNILQEYEHRQRQIEDLSTKQEADKKELKRF----LAEIDAL---KEKWLPT---LR 882
L +N +++Y HR + E+ S + +EL++F A+ D L + K + T ++
Sbjct: 366 TLEENQVKKY-HRLK--EEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAKIK 422
Query: 883 NLVAQINETFSR--NFQEMAVAGEVSLDEHE 911
+ +I E R +E + SL+E +
Sbjct: 423 QKLREIEENQKRIEKLEEYITTSKQSLEEQK 453
Score = 90 (36.7 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 52/272 (19%), Positives = 123/272 (45%)
Query: 651 EDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAA 710
E E KL KE ++ +K++ ++E+ + +K++L + +E ++ ++ +
Sbjct: 232 EVEIEKLNKELASKNKEIEKDKKRMDKVEDELKEKKKELGKMMREQQ--QIEKEIKEKDS 289
Query: 711 DLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQ-AS 769
+LN ++ +Y +N +I K A+K + + + K R+ + + + E L+++ A
Sbjct: 290 ELNQKRPQYIKAKENTSHKIK--KLEAAKKSLQNAQKHYKKRKGDMDELEKEMLSVEKAR 347
Query: 770 LHYEDCKKEVEHCR-KHLSDAKRQAESIAFITPELEKEFLEMPTTIEEL---EAAIQDNI 825
+E+ +E + + L+ + Q + + E K + +E+ + A QD +
Sbjct: 348 QEFEERMEEESQSQGRDLTLEENQVKKYHRLKEEASKRAATLAQELEKFNRDQKADQDRL 407
Query: 826 S-----QANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPT 880
+ + + Q L+E E Q++IE L K+ L+ L E+ +
Sbjct: 408 DLEERKKVETEAKIKQK-LREIEENQKRIEKLEEYITTSKQSLEEQKKLEGELTEE-VEM 465
Query: 881 LRNLVAQINETFSRNFQEMAVAGEVSLDEHES 912
+ + +IN+ ++ +++ G+ +D ES
Sbjct: 466 AKRRIDEINKELNQVMEQL---GDARIDRQES 494
Score = 86 (35.3 bits), Expect = 7.1e-07, Sum P(2) = 7.1e-07
Identities = 55/261 (21%), Positives = 118/261 (45%)
Query: 650 IEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQA 709
+EDE + +KE +++ Q +++ +E ++ +N +KR + I+ +++ + + KL
Sbjct: 259 VEDELKEKKKELGKMMREQQQIEKEIKEKDSELN-QKRP-QYIKAKENTSHKIKKLEAAK 316
Query: 710 ADLNIQQFKYAI------EIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFN-LKQHE 762
L Q Y E++ ++ + + + E+ + + LE N +K++
Sbjct: 317 KSLQNAQKHYKKRKGDMDELEKEMLSVEKARQEFEERMEEESQSQGRDLTLEENQVKKYH 376
Query: 763 KLALQASLHYEDCKKEVEHC-RKHLSDAKR-------QAESIAFITPELEKEFLEMPTTI 814
+L +AS +E+E R +D R + E+ A I +L +E E I
Sbjct: 377 RLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAKIKQKL-REIEENQKRI 435
Query: 815 EELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEI-DAL 873
E+LE I + L + +E E +R+I++++ KEL + + ++ DA
Sbjct: 436 EKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEIN-------KELNQVMEQLGDAR 488
Query: 874 KEKWLPTLRNLVAQINETFSR 894
++ + + A+I E+ R
Sbjct: 489 IDRQESSRQQRKAEIMESIKR 509
Score = 73 (30.8 bits), Expect = 4.8e-05, Sum P(3) = 4.8e-05
Identities = 33/138 (23%), Positives = 61/138 (44%)
Query: 188 EKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYD 247
E +SK K IE KR ++LK E++K++ ++ + + +EK +K+K L +
Sbjct: 241 ELASKNKEIEKDKKRMDKVEDELK----EKKKELGKMMREQQQIEK--EIKEKDSEL--N 292
Query: 248 MKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENSK 307
K+ +YI +L K + +K GD +L + K
Sbjct: 293 QKRPQYIKAKENTSHKIKKLEAAKKSLQNAQKHYKKRK-------GDMDELEKEMLSVEK 345
Query: 308 RRMDFLEKVDQGVQVQGK 325
R +F E++++ Q QG+
Sbjct: 346 ARQEFEERMEEESQSQGR 363
Score = 70 (29.7 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 67/318 (21%), Positives = 129/318 (40%)
Query: 648 RLIEDEAAKLQKEREEIINIVQ-IEKRKRREME--NHINLRKRKLESIEKEDDINTALAK 704
R IE+ +++K E I Q +E++K+ E E + + KR+++ I KE +N + +
Sbjct: 426 REIEENQKRIEKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEINKE--LNQVMEQ 483
Query: 705 LVDQAADL---NIQQFKYAI--EIKNL--------LVEI---VSCKWSYAE-----KHMA 743
L D D + QQ K I IK L L+++ K+ A K+M
Sbjct: 484 LGDARIDRQESSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGKNMD 543
Query: 744 SIEFDAKI--RE-LEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFIT 800
+I D++ R+ +++ +Q + L Y + K E R+ L AK + I +
Sbjct: 544 AIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRE-LKGAKLVIDVIRYEP 602
Query: 801 PELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADK 860
P ++K L+ A + DN+ A I F H+ ++ ++
Sbjct: 603 PHIKKA-LQYACG----NALVCDNVEDARRIAFGGHQ-----RHKTVALDGTLFQKSG-- 650
Query: 861 KELKRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGIL 920
+ +++ A +W + + + E + +E A + + G+
Sbjct: 651 -VISGGASDLKAKARRWDEKAVDKLKEKKERLTEELKEQMKAKRKEAELRQVQSQAHGLQ 709
Query: 921 IKVKFRQSGQLEVLSAHH 938
+++K+ QS LE H
Sbjct: 710 MRLKYSQS-DLEQTKTRH 726
Score = 68 (29.0 bits), Expect = 0.00023, Sum P(3) = 0.00023
Identities = 37/174 (21%), Positives = 78/174 (44%)
Query: 750 KIRELEFNLKQHEKLALQ-ASL--HYEDCKKEVEHCRKHLSDAKRQAESIAF-ITPELEK 805
K R L NL++ KL + A+ D K+ ++ + + D K + + + E +
Sbjct: 723 KTRHLALNLQEKSKLESELANFGPRINDIKRIIQSREREMKDLKEKMNQVEDEVFEEFCR 782
Query: 806 EF-LEMPTTIEELEAAIQDNISQANSIFFLNQNILQ--EYEHRQRQIEDLSTKQEADKKE 862
E + EE + Q+ I++ + F NQ + + + Q+++ K ++
Sbjct: 783 EIGVRNIREFEEEKVKRQNEIAKKR-LEFENQKTRLGIQLDFEKNQLKEDQDKVHMWEQT 841
Query: 863 LKRFLAEIDALK---EKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESD 913
+K+ EI+ LK ++ + + +AQ+ + +N Q +A EV+ HE +
Sbjct: 842 VKKDENEIEKLKKEEQRHMKIIDETMAQLQDL--KN-QHLAKKSEVNDKNHEME 892
Score = 62 (26.9 bits), Expect = 0.00091, Sum P(3) = 0.00091
Identities = 25/108 (23%), Positives = 49/108 (45%)
Query: 134 EITKRF--NIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSS 191
E+ + F I V N+ +F +++V +++ +L E +K QL + L E
Sbjct: 775 EVFEEFCREIGVRNIREF-EEEKVKRQNEIAKKRLEFENQKTRLGIQLDFEKNQLKEDQD 833
Query: 192 KLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKK 239
K+ E TVK++ + + +LK K ++ + + L+ KK
Sbjct: 834 KVHMWEQTVKKDENEIEKLKKEEQRHMKIIDETMAQLQDLKNQHLAKK 881
Score = 43 (20.2 bits), Expect = 6.1e-10, Sum P(3) = 6.1e-10
Identities = 18/75 (24%), Positives = 39/75 (52%)
Query: 379 ELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKL---LHALRNSGAENIF 435
E+GV + +++ E+EK+ QN++ + RL + E++ +L L +N E+
Sbjct: 783 EIGV----RNIREFEEEKVKRQNEIAKK----RL-EFENQKTRLGIQLDFEKNQLKEDQD 833
Query: 436 EAYCWLQQHRHELNK 450
+ + W Q + + N+
Sbjct: 834 KVHMWEQTVKKDENE 848
Score = 41 (19.5 bits), Expect = 0.00091, Sum P(3) = 0.00091
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 76 RATSIGAYVKRGEESGYIKISLRGDTKEEHLTIMRKIDTRNK 117
R + Y+ ++S + L G+ EE R+ID NK
Sbjct: 434 RIEKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEINK 475
Score = 40 (19.1 bits), Expect = 1.2e-09, Sum P(3) = 1.2e-09
Identities = 18/70 (25%), Positives = 32/70 (45%)
Query: 489 GDRDFLAKNLKPFDVPILNYVSNESSRKEPFQISEEMRALGISARLDQVFDAPHAVKEVL 548
G D AK + +D ++ + + R ++ E+M+A A L QV H ++ L
Sbjct: 655 GASDLKAK-ARRWDEKAVDKLKEKKERLTE-ELKEQMKAKRKEAELRQVQSQAHGLQMRL 712
Query: 549 -ISQFGLDSS 557
SQ L+ +
Sbjct: 713 KYSQSDLEQT 722
Score = 39 (18.8 bits), Expect = 1.5e-09, Sum P(3) = 1.5e-09
Identities = 16/73 (21%), Positives = 34/73 (46%)
Query: 370 IEKLGSQILELGVQANQKRLQKSEKEKI---LNQNKLTLRQCSDRLKDMEDKNNKLLHAL 426
+E+ ++ L L +Q K +SE +N K ++ +KD+++K N++
Sbjct: 719 LEQTKTRHLALNLQEKSKL--ESELANFGPRINDIKRIIQSREREMKDLKEKMNQV---- 772
Query: 427 RNSGAENIFEAYC 439
+ +FE +C
Sbjct: 773 ----EDEVFEEFC 781
Score = 37 (18.1 bits), Expect = 2.5e-09, Sum P(3) = 2.5e-09
Identities = 11/52 (21%), Positives = 29/52 (55%)
Query: 375 SQILELGVQANQKRLQKSEKEKILNQNKLTLRQCS---DRLKDMEDKNNKLL 423
+Q LG+Q + ++ Q E + ++ + T+++ ++LK E ++ K++
Sbjct: 812 NQKTRLGIQLDFEKNQLKEDQDKVHMWEQTVKKDENEIEKLKKEEQRHMKII 863
>UNIPROTKB|F2Z5A8 [details] [associations]
symbol:LOC100523938 "Structural maintenance of chromosomes
protein" species:9823 "Sus scrofa" [GO:0005634 "nucleus"
evidence=IEA] [GO:0030261 "chromosome condensation" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0005694
GO:GO:0006281 GO:GO:0006310 GO:GO:0030261 GO:GO:0007062
SUPFAM:SSF75553 KO:K06636 GeneTree:ENSGT00580000081569
EMBL:CU695116 EMBL:CU914655 EMBL:GACC01000120 RefSeq:XP_003135172.3
Ensembl:ENSSSCT00000013478 GeneID:100523938 KEGG:ssc:100523938
Uniprot:F2Z5A8
Length = 1233
Score = 122 (48.0 bits), Expect = 6.1e-10, Sum P(3) = 6.1e-10
Identities = 62/222 (27%), Positives = 100/222 (45%)
Query: 26 IELHNFMTFD-HLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI---- 80
IE+ NF ++ I P R +IGPNGSGKS+L+ AI+ LG T L R ++
Sbjct: 7 IEIENFKSYKGRQIIGPFQRFTAIIGPNGSGKSNLMDAISFVLGEKTSNL-RVKTLRDLI 65
Query: 81 -GAYV-KRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKR 138
GA V K ++ + + E+ T R I SE+ N KVV E E ++
Sbjct: 66 HGAPVGKPAANRAFVSMVYSEEGAEDR-TFARVI-VGGSSEYKINNKVVQLHEYSEELEK 123
Query: 139 FNIQVNNLTQFLPQDRVCEFAKLSPVK---LLEETEKAVGDPQLPVQHCALVEKSSKLKT 195
I + + Q V A +P + L EE ++ G+ L ++ K K
Sbjct: 124 LGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRS-GE---------LAQEYDKRKK 173
Query: 196 IECTVKRNGDT-LNQLKALNVEQE-KDVERVRQRAELLEKVE 235
E VK DT N + N+ E K+ ++ ++ A+ ++++
Sbjct: 174 -EM-VKAEEDTQFNYHRKKNIAAERKEAKQEKEEADRYQRLK 213
Score = 121 (47.7 bits), Expect = 6.1e-10, Sum P(3) = 6.1e-10
Identities = 79/384 (20%), Positives = 166/384 (43%)
Query: 651 EDEAAKLQKEREEIINIV-----QIEKRKRREM--ENHINLRKRKLESIEKE-DDINTAL 702
E+E KL+KE + + I+ Q++ K + + ++ +N + ++E I K+ N +
Sbjct: 846 ENEIEKLKKEEQRHMKIIDETMAQLQDLKNQHLAKKSEVNDKNHEMEEIRKKLGGANKEM 905
Query: 703 AKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHE 762
L + + + + + NLL +CK + ++ D I + E + + +
Sbjct: 906 THLQKEVTAIETKLEQKRSDRHNLLQ---ACKMQDIKLPLSKGTMD-DISQEEGSSQGED 961
Query: 763 KLA---LQASLHYEDCKKEVEH---CRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEE 816
++ ++++ + E+++ C + L DA+ + E I L+++ E + ++
Sbjct: 962 SVSGSQRTSNIYAREALIEIDYGDLC-EDLKDAQAE-EEIKQEMNTLQQKLNEQQSVLQR 1019
Query: 817 LEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEK 876
+ A + + S+ Q E+E +++ + E KKE RF D
Sbjct: 1020 IAAPNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKE--RF----DRFNAC 1073
Query: 877 WLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVK-FRQSGQLEVLS 935
+ N + +I + SRN A G + +E D + + K FR L
Sbjct: 1074 FESVATN-IDEIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNL---- 1128
Query: 936 AHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTP 995
SGGE++V+ + L ++ PF V+DEI+ +D N K+ ++ S N
Sbjct: 1129 ----SGGEKTVAALALLFAIHSYKPAPFFVLDEIDAALDNTNIGKV-ANYIKEQSTCNF- 1182
Query: 996 QCFLLTPKLLPDLEYSEACSILNI 1019
Q +++ L + Y++A S++ +
Sbjct: 1183 QAIVIS---LKEEFYTKAESLIGV 1203
Score = 98 (39.6 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 57/271 (21%), Positives = 118/271 (43%)
Query: 654 AAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKE-DDINTALAKLVDQAADL 712
AA+ ++ ++E + ++ K + + L+ KL E E + +N LA +
Sbjct: 193 AAERKEAKQEKEEADRYQRLKDEVVRAQVQLQLFKLYHNEVEIEKLNKELASKNKEIEKD 252
Query: 713 NIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHY 772
+ K E+K E+ + IE + K ++ E N K+ + + + + +
Sbjct: 253 KKRMDKVEDELKEKKKELGKMM-----REQQQIEKEIKEKDSELNQKRPQYIKAKENTSH 307
Query: 773 EDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIF 832
+ K++E +K L +A++ + ELEKE L + +E E +++
Sbjct: 308 KI--KKLEAAKKSLQNAQKHYKKRKGDMDELEKEMLSVEKARQEFEERMEEESQSQGRDL 365
Query: 833 FLNQNILQEYEHRQRQIEDLSTKQEADKKELKRF----LAEIDAL---KEKWLPT---LR 882
L +N +++Y HR + E+ S + +EL++F A+ D L + K + T ++
Sbjct: 366 TLEENQVKKY-HRLK--EEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAKIK 422
Query: 883 NLVAQINETFSR--NFQEMAVAGEVSLDEHE 911
+ +I E R +E + SL+E +
Sbjct: 423 QKLREIEENQKRIEKLEEYITTSKQSLEEQK 453
Score = 90 (36.7 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 52/272 (19%), Positives = 123/272 (45%)
Query: 651 EDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAA 710
E E KL KE ++ +K++ ++E+ + +K++L + +E ++ ++ +
Sbjct: 232 EVEIEKLNKELASKNKEIEKDKKRMDKVEDELKEKKKELGKMMREQQ--QIEKEIKEKDS 289
Query: 711 DLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQ-AS 769
+LN ++ +Y +N +I K A+K + + + K R+ + + + E L+++ A
Sbjct: 290 ELNQKRPQYIKAKENTSHKIK--KLEAAKKSLQNAQKHYKKRKGDMDELEKEMLSVEKAR 347
Query: 770 LHYEDCKKEVEHCR-KHLSDAKRQAESIAFITPELEKEFLEMPTTIEEL---EAAIQDNI 825
+E+ +E + + L+ + Q + + E K + +E+ + A QD +
Sbjct: 348 QEFEERMEEESQSQGRDLTLEENQVKKYHRLKEEASKRAATLAQELEKFNRDQKADQDRL 407
Query: 826 S-----QANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPT 880
+ + + Q L+E E Q++IE L K+ L+ L E+ +
Sbjct: 408 DLEERKKVETEAKIKQK-LREIEENQKRIEKLEEYITTSKQSLEEQKKLEGELTEE-VEM 465
Query: 881 LRNLVAQINETFSRNFQEMAVAGEVSLDEHES 912
+ + +IN+ ++ +++ G+ +D ES
Sbjct: 466 AKRRIDEINKELNQVMEQL---GDARIDRQES 494
Score = 86 (35.3 bits), Expect = 7.1e-07, Sum P(2) = 7.1e-07
Identities = 55/261 (21%), Positives = 118/261 (45%)
Query: 650 IEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQA 709
+EDE + +KE +++ Q +++ +E ++ +N +KR + I+ +++ + + KL
Sbjct: 259 VEDELKEKKKELGKMMREQQQIEKEIKEKDSELN-QKRP-QYIKAKENTSHKIKKLEAAK 316
Query: 710 ADLNIQQFKYAI------EIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFN-LKQHE 762
L Q Y E++ ++ + + + E+ + + LE N +K++
Sbjct: 317 KSLQNAQKHYKKRKGDMDELEKEMLSVEKARQEFEERMEEESQSQGRDLTLEENQVKKYH 376
Query: 763 KLALQASLHYEDCKKEVEHC-RKHLSDAKR-------QAESIAFITPELEKEFLEMPTTI 814
+L +AS +E+E R +D R + E+ A I +L +E E I
Sbjct: 377 RLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAKIKQKL-REIEENQKRI 435
Query: 815 EELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEI-DAL 873
E+LE I + L + +E E +R+I++++ KEL + + ++ DA
Sbjct: 436 EKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEIN-------KELNQVMEQLGDAR 488
Query: 874 KEKWLPTLRNLVAQINETFSR 894
++ + + A+I E+ R
Sbjct: 489 IDRQESSRQQRKAEIMESIKR 509
Score = 73 (30.8 bits), Expect = 4.8e-05, Sum P(3) = 4.8e-05
Identities = 33/138 (23%), Positives = 61/138 (44%)
Query: 188 EKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYD 247
E +SK K IE KR ++LK E++K++ ++ + + +EK +K+K L +
Sbjct: 241 ELASKNKEIEKDKKRMDKVEDELK----EKKKELGKMMREQQQIEK--EIKEKDSEL--N 292
Query: 248 MKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENSK 307
K+ +YI +L K + +K GD +L + K
Sbjct: 293 QKRPQYIKAKENTSHKIKKLEAAKKSLQNAQKHYKKRK-------GDMDELEKEMLSVEK 345
Query: 308 RRMDFLEKVDQGVQVQGK 325
R +F E++++ Q QG+
Sbjct: 346 ARQEFEERMEEESQSQGR 363
Score = 70 (29.7 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 67/318 (21%), Positives = 129/318 (40%)
Query: 648 RLIEDEAAKLQKEREEIINIVQ-IEKRKRREME--NHINLRKRKLESIEKEDDINTALAK 704
R IE+ +++K E I Q +E++K+ E E + + KR+++ I KE +N + +
Sbjct: 426 REIEENQKRIEKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEINKE--LNQVMEQ 483
Query: 705 LVDQAADL---NIQQFKYAI--EIKNL--------LVEI---VSCKWSYAE-----KHMA 743
L D D + QQ K I IK L L+++ K+ A K+M
Sbjct: 484 LGDARIDRQESSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGKNMD 543
Query: 744 SIEFDAKI--RE-LEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFIT 800
+I D++ R+ +++ +Q + L Y + K E R+ L AK + I +
Sbjct: 544 AIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRE-LKGAKLVIDVIRYEP 602
Query: 801 PELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADK 860
P ++K L+ A + DN+ A I F H+ ++ ++
Sbjct: 603 PHIKKA-LQYACG----NALVCDNVEDARRIAFGGHQ-----RHKTVALDGTLFQKSG-- 650
Query: 861 KELKRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGIL 920
+ +++ A +W + + + E + +E A + + G+
Sbjct: 651 -VISGGASDLKAKARRWDEKAVDKLKEKKERLTEELKEQMKAKRKEAELRQVQSQAHGLQ 709
Query: 921 IKVKFRQSGQLEVLSAHH 938
+++K+ QS LE H
Sbjct: 710 MRLKYSQS-DLEQTKTRH 726
Score = 68 (29.0 bits), Expect = 0.00023, Sum P(3) = 0.00023
Identities = 37/174 (21%), Positives = 78/174 (44%)
Query: 750 KIRELEFNLKQHEKLALQ-ASL--HYEDCKKEVEHCRKHLSDAKRQAESIAF-ITPELEK 805
K R L NL++ KL + A+ D K+ ++ + + D K + + + E +
Sbjct: 723 KTRHLALNLQEKSKLESELANFGPRINDIKRIIQSREREMKDLKEKMNQVEDEVFEEFCR 782
Query: 806 EF-LEMPTTIEELEAAIQDNISQANSIFFLNQNILQ--EYEHRQRQIEDLSTKQEADKKE 862
E + EE + Q+ I++ + F NQ + + + Q+++ K ++
Sbjct: 783 EIGVRNIREFEEEKVKRQNEIAKKR-LEFENQKTRLGIQLDFEKNQLKEDQDKVHMWEQT 841
Query: 863 LKRFLAEIDALK---EKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESD 913
+K+ EI+ LK ++ + + +AQ+ + +N Q +A EV+ HE +
Sbjct: 842 VKKDENEIEKLKKEEQRHMKIIDETMAQLQDL--KN-QHLAKKSEVNDKNHEME 892
Score = 62 (26.9 bits), Expect = 0.00091, Sum P(3) = 0.00091
Identities = 25/108 (23%), Positives = 49/108 (45%)
Query: 134 EITKRF--NIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSS 191
E+ + F I V N+ +F +++V +++ +L E +K QL + L E
Sbjct: 775 EVFEEFCREIGVRNIREF-EEEKVKRQNEIAKKRLEFENQKTRLGIQLDFEKNQLKEDQD 833
Query: 192 KLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKK 239
K+ E TVK++ + + +LK K ++ + + L+ KK
Sbjct: 834 KVHMWEQTVKKDENEIEKLKKEEQRHMKIIDETMAQLQDLKNQHLAKK 881
Score = 43 (20.2 bits), Expect = 6.1e-10, Sum P(3) = 6.1e-10
Identities = 18/75 (24%), Positives = 39/75 (52%)
Query: 379 ELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKL---LHALRNSGAENIF 435
E+GV + +++ E+EK+ QN++ + RL + E++ +L L +N E+
Sbjct: 783 EIGV----RNIREFEEEKVKRQNEIAKK----RL-EFENQKTRLGIQLDFEKNQLKEDQD 833
Query: 436 EAYCWLQQHRHELNK 450
+ + W Q + + N+
Sbjct: 834 KVHMWEQTVKKDENE 848
Score = 41 (19.5 bits), Expect = 0.00091, Sum P(3) = 0.00091
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 76 RATSIGAYVKRGEESGYIKISLRGDTKEEHLTIMRKIDTRNK 117
R + Y+ ++S + L G+ EE R+ID NK
Sbjct: 434 RIEKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEINK 475
Score = 40 (19.1 bits), Expect = 1.2e-09, Sum P(3) = 1.2e-09
Identities = 18/70 (25%), Positives = 32/70 (45%)
Query: 489 GDRDFLAKNLKPFDVPILNYVSNESSRKEPFQISEEMRALGISARLDQVFDAPHAVKEVL 548
G D AK + +D ++ + + R ++ E+M+A A L QV H ++ L
Sbjct: 655 GASDLKAK-ARRWDEKAVDKLKEKKERLTE-ELKEQMKAKRKEAELRQVQSQAHGLQMRL 712
Query: 549 -ISQFGLDSS 557
SQ L+ +
Sbjct: 713 KYSQSDLEQT 722
Score = 39 (18.8 bits), Expect = 1.5e-09, Sum P(3) = 1.5e-09
Identities = 16/73 (21%), Positives = 34/73 (46%)
Query: 370 IEKLGSQILELGVQANQKRLQKSEKEKI---LNQNKLTLRQCSDRLKDMEDKNNKLLHAL 426
+E+ ++ L L +Q K +SE +N K ++ +KD+++K N++
Sbjct: 719 LEQTKTRHLALNLQEKSKL--ESELANFGPRINDIKRIIQSREREMKDLKEKMNQV---- 772
Query: 427 RNSGAENIFEAYC 439
+ +FE +C
Sbjct: 773 ----EDEVFEEFC 781
Score = 37 (18.1 bits), Expect = 2.5e-09, Sum P(3) = 2.5e-09
Identities = 11/52 (21%), Positives = 29/52 (55%)
Query: 375 SQILELGVQANQKRLQKSEKEKILNQNKLTLRQCS---DRLKDMEDKNNKLL 423
+Q LG+Q + ++ Q E + ++ + T+++ ++LK E ++ K++
Sbjct: 812 NQKTRLGIQLDFEKNQLKEDQDKVHMWEQTVKKDENEIEKLKKEEQRHMKII 863
>UNIPROTKB|E2RCX4 [details] [associations]
symbol:SMC4 "Structural maintenance of chromosomes protein"
species:9615 "Canis lupus familiaris" [GO:0005634 "nucleus"
evidence=IEA] [GO:0030261 "chromosome condensation" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0005694
GO:GO:0006281 GO:GO:0006310 GO:GO:0030261 GO:GO:0007062
GeneTree:ENSGT00580000081617 KO:K06675 SUPFAM:SSF75553 OMA:IAIEFLT
CTD:10051 EMBL:AAEX03017331 RefSeq:XP_535848.2
Ensembl:ENSCAFT00000022729 GeneID:478679 KEGG:cfa:478679
Uniprot:E2RCX4
Length = 1288
Score = 129 (50.5 bits), Expect = 6.2e-10, Sum P(2) = 6.2e-10
Identities = 69/343 (20%), Positives = 152/343 (44%)
Query: 651 EDEAAKLQKEREEIINIV---QIE----KRKRREMENHINLRKRKLESIEKE-DDINTAL 702
+D+ K+ K+ +E + + Q+ R ++ ++ + + +++ EKE D+ L
Sbjct: 903 QDKLDKINKQLDECASAITKAQVAIKTADRNLKKAQDSVFRTEEEIKDTEKEVKDLTAEL 962
Query: 703 AKLVDQAADL--NIQQFKYAI-EI----KNLLVEIVSCKWSYAEKHMASIEFDAKIRELE 755
+ D+AA++ N + ++ EI +NLL E+ + + ++ K+ +++
Sbjct: 963 KSVEDKAAEVYQNTTAAEESLPEIQKEHRNLLQELKIIQENEHALQKDALSIKLKLEQID 1022
Query: 756 FNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIE 815
++ +H + + Y +KE+ H + E IA ++PE + E ++ P +I
Sbjct: 1023 GHIAEHN-----SKIKY--WQKEIGKISLHPIE-NNPLEEIAVLSPE-DLEAIKNPDSIT 1073
Query: 816 ELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKR--FLAEIDAL 873
A ++ + N + EY+ ++ L E DK +R F + L
Sbjct: 1074 NQIALLEAQCHEMKP----NLGAIAEYKKKEELY--LQRVAELDKITCERDHFRQAYEDL 1127
Query: 874 KEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKF--GILIKVKFRQSGQL 931
+++ L I N+Q + + G+ L+ +S D F GI+ V+ +
Sbjct: 1128 RKQRLNEFMAGFYIITNKLKENYQMLTLGGDAELELVDS-LDPFSEGIMFSVRPPKKSWK 1186
Query: 932 EVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMD 974
++ + SGGE+++S++ + +L P +DEI+ +D
Sbjct: 1187 KIFNL---SGGEKTLSSLALVFALHHYKPTPLYFMDEIDAALD 1226
Score = 109 (43.4 bits), Expect = 6.2e-10, Sum P(2) = 6.2e-10
Identities = 92/425 (21%), Positives = 170/425 (40%)
Query: 23 IIEIELHNFMTF-DHLICKP-GSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI 80
I I NF ++ I P R + +IGPNGSGKS+++ ++ G Q + R+ +
Sbjct: 84 ITHIVNQNFKSYAGEKILGPFHKRFSCIIGPNGSGKSNVIDSMLFVFGYRAQKI-RSKKL 142
Query: 81 GAYVKRGEESGYIK-----------ISLRGDTKE----EHLTIMRKIDTRNKSEWFFNGK 125
+ +E I+ I GD E + + R N S + +GK
Sbjct: 143 SVLIHNSDEHKDIQSCTVEVHFQKIIDKEGDDYEVIPNSNFYVSRTAYRDNTSVYHISGK 202
Query: 126 VVPKGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCA 185
+V + + I +++ + Q V + A + P E E + + +
Sbjct: 203 KTTFKDVGNLLRSHGIDLDHNRFLILQGEVEQIAMMKPKGQTEHDEGMLEYLEDIIGSGR 262
Query: 186 LVEKSSKL-KTIECTVKRNGDTLNQLKALNVEQEKD-VERVRQRA-ELLE-KVESMKKKL 241
L E L + +E + G+ LN++K VE+EKD +E + A E L + E +KK
Sbjct: 263 LNEPIKILCRRVEILNEHRGEKLNRVKL--VEKEKDALEGEKNIAIEFLTLENEIFRKKN 320
Query: 242 PWLKYDMKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPI--EGKKQEKAILDGDCKKLS 299
+Y + + ++E S + E K + KA+ D + KKL+
Sbjct: 321 HVCQYYIYDLQ--KRIAEMETQKEKIHEDTKEINEKSSILSNEMKAKNKAVKDVE-KKLN 377
Query: 300 SLINENSKRRMDFLEKVDQGVQVQGKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQT 359
+ + + F + + VQV+ K K KA+ +
Sbjct: 378 KITKFIEENKQKFTQLDLEDVQVREKLKHASS-------------KAKKLEKQLQKDKEK 424
Query: 360 VPAYEPPHDKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRL-KDMEDK 418
V ++ K EK+ I E+ + + +K ++EK L + +L+Q + L ++ E +
Sbjct: 425 VEEFKSIPAKSEKI---ITEMTTRNSALEKEKEKEEKKLKEVMDSLKQETQGLQREKESR 481
Query: 419 NNKLL 423
+L+
Sbjct: 482 EKELM 486
Score = 90 (36.7 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
Identities = 37/138 (26%), Positives = 71/138 (51%)
Query: 643 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRK-RREMENHINLRKRKLESIEKEDDINTA 701
M T +E E K +K+ +E+++ ++ E + +RE E+ R+++L K +N A
Sbjct: 442 MTTRNSALEKEKEKEEKKLKEVMDSLKQETQGLQREKES----REKELMGFSKS--VNEA 495
Query: 702 LAKL-VDQAA-DLNIQQFKYAIEIKNLLVE-IVSCKWSYAEKHMASIEFDAKIRELEFNL 758
+K+ V Q+ D+ + + A+ N E +++ + E+ A + +AK+ + E L
Sbjct: 496 RSKMDVAQSELDIYLSRHNTAVSQLNKAKEALIAASETLKERKAAIRDIEAKLPQSELEL 555
Query: 759 KQHEKLALQASLHYEDCK 776
K+ EK LQ L E+ K
Sbjct: 556 KEKEK-ELQ-ELTQEEIK 571
Score = 82 (33.9 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 58/332 (17%), Positives = 152/332 (45%)
Query: 655 AKLQKEREEIINIVQIEKRKRREMENHINLRKRK-LESIEKEDDINTALAKLVDQAADLN 713
+K+ K R +V+I + + ME+ + +K L+ E++ + A+ KL ++
Sbjct: 756 SKVMKGRMGSSVVVEISEEEVNRMESQLQRDSQKALQIQEQKVQLEEAVVKLRHNEREMR 815
Query: 714 --IQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIREL-EFNLK----QHEKLAL 766
+++F +I+ + E ++ + E ++ + D K ++L E N+ +++ +A
Sbjct: 816 NTLEKFTASIQRLSEQEEYLNIQVKELEANVLATAPDKKKQKLLEENVSVFKTEYDNVAE 875
Query: 767 QASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQD--- 823
+A + K+ + + +++ K +A+ ++ K+ E + I + + AI+
Sbjct: 876 RAGKVEAEVKR-LHNTIVEINNHKLKAQQDKL--DKINKQLDECASAITKAQVAIKTADR 932
Query: 824 NISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTL-- 881
N+ +A F + +E + +++++DL+ + ++ + + A +E LP +
Sbjct: 933 NLKKAQDSVFRTE---EEIKDTEKEVKDLTAELKSVEDKAAEVYQNTTAAEES-LPEIQK 988
Query: 882 --RNLVAQIN--ETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVLSAH 937
RNL+ ++ + Q+ A++ ++ L++ + + K+K+ Q ++ +S H
Sbjct: 989 EHRNLLQELKIIQENEHALQKDALSIKLKLEQIDGHIAEHNS--KIKYWQK-EIGKISLH 1045
Query: 938 HQSGGERSVSTILYLVSLQDLTNCPFRVVDEI 969
+L L+ + N P + ++I
Sbjct: 1046 PIENNPLEEIAVLSPEDLEAIKN-PDSITNQI 1076
Score = 75 (31.5 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 37/235 (15%), Positives = 96/235 (40%)
Query: 643 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESI-EKEDDINTA 701
M+++ + +A ++Q+++ ++ V + REM N + ++ + E+E+ +N
Sbjct: 779 MESQLQRDSQKALQIQEQKVQLEEAVVKLRHNEREMRNTLEKFTASIQRLSEQEEYLNIQ 838
Query: 702 LAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAK-IRELEFNLKQ 760
+ +L + K + +N V + ++ + +E + K + +
Sbjct: 839 VKELEANVLATAPDKKKQKLLEEN--VSVFKTEYDNVAERAGKVEAEVKRLHNTIVEINN 896
Query: 761 HEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAA 820
H+ A Q L + K+++ C ++ A+ ++ + + I++ E
Sbjct: 897 HKLKAQQDKL--DKINKQLDECASAITKAQVAIKTADRNLKKAQDSVFRTEEEIKDTEKE 954
Query: 821 IQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKE 875
++D ++ S+ + Y++ E L Q KE + L E+ ++E
Sbjct: 955 VKDLTAELKSV---EDKAAEVYQNTTAAEESLPEIQ----KEHRNLLQELKIIQE 1002
Score = 67 (28.6 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 71/340 (20%), Positives = 128/340 (37%)
Query: 99 GDTKEEHLTIMRKIDTRN--KSEWFFNGKVVPKG-EVLEITKRFNIQVNNLTQ--FLPQD 153
G E + R+++ N + E K+V K + LE K I+ L F ++
Sbjct: 261 GRLNEPIKILCRRVEILNEHRGEKLNRVKLVEKEKDALEGEKNIAIEFLTLENEIFRKKN 320
Query: 154 RVCEFAKLSPVKLLEETE---KAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQL 210
VC++ K + E E + + + + + + S+++K VK LN++
Sbjct: 321 HVCQYYIYDLQKRIAEMETQKEKIHEDTKEINEKSSI-LSNEMKAKNKAVKDVEKKLNKI 379
Query: 211 -KALNVEQEK----DVERVRQRAELLEKVESMKKKLP-WLKYDMKKAEYIXXXXXXXXXX 264
K + ++K D+E V+ R E L+ S KKL L+ D +K E
Sbjct: 380 TKFIEENKQKFTQLDLEDVQVR-EKLKHASSKAKKLEKQLQKDKEKVEEFKSIPAKSEKI 438
Query: 265 XXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENSKRRMDFLEKVDQGVQVQG 324
N+ E K E KK K ++D ++ L E R + + + +
Sbjct: 439 ITEMTTRNSALEKEKEKEEKKL-KEVMDSLKQETQGLQREKESREKELMGFSKSVNEARS 497
Query: 325 KYKXXXXXXXXXXXXX-XXILKARXXXXXXXXXXQTVPAYEPPHDKIE-KLGSQILELGV 382
K + + +T+ + IE KL LEL
Sbjct: 498 KMDVAQSELDIYLSRHNTAVSQLNKAKEALIAASETLKERKAAIRDIEAKLPQSELEL-- 555
Query: 383 QANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKL 422
+ +K LQ+ +E+I + K +R D + +E+ + L
Sbjct: 556 KEKEKELQELTQEEI--KLKGLVR---DLFQKVEEAKSSL 590
>SGD|S000001886 [details] [associations]
symbol:SMC1 "Subunit of the multiprotein cohesin complex"
species:4932 "Saccharomyces cerevisiae" [GO:0003690
"double-stranded DNA binding" evidence=IDA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0005694
"chromosome" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0034990 "nuclear mitotic cohesin complex"
evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=IMP] [GO:0007064 "mitotic sister chromatid cohesion"
evidence=IGI] [GO:0051276 "chromosome organization" evidence=IEA]
[GO:0000217 "DNA secondary structure binding" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0003680 "AT DNA
binding" evidence=IDA] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IMP] [GO:0030261 "chromosome condensation"
evidence=IEA] InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 SGD:S000001886
Pfam:PF02463 GO:GO:0005524 GO:GO:0051301 EMBL:D50617 EMBL:BK006940
GO:GO:0016887 GO:GO:0006310 GO:GO:0003690 GO:GO:0006302
GO:GO:0030261 GO:GO:0003680 GO:GO:0007064 eggNOG:COG1196
SUPFAM:SSF75553 PDB:1W1W PDBsum:1W1W GO:GO:0034990
HOGENOM:HOG000195481 KO:K06636 OMA:NALVCET
GeneTree:ENSGT00580000081569 OrthoDB:EOG42VCQD EMBL:L00602
PIR:A49464 RefSeq:NP_116647.1 ProteinModelPortal:P32908 SMR:P32908
DIP:DIP-2982N IntAct:P32908 MINT:MINT-434606 STRING:P32908
PaxDb:P32908 PeptideAtlas:P32908 EnsemblFungi:YFL008W GeneID:850540
KEGG:sce:YFL008W CYGD:YFL008w EvolutionaryTrace:P32908
NextBio:966301 Genevestigator:P32908 GermOnline:YFL008W
GO:GO:0000217 Uniprot:P32908
Length = 1225
Score = 115 (45.5 bits), Expect = 6.3e-10, Sum P(3) = 6.3e-10
Identities = 65/354 (18%), Positives = 152/354 (42%)
Query: 643 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESI--EKEDDINT 700
+Q E + + +K ++++ N Q+E + E E I ++ +ES E ++ ++
Sbjct: 832 LQFETDRLSTTQRRYEKAQKDLEN-AQVEMKSLEEQEYAIEMKIGSIESKLEEHKNHLDE 890
Query: 701 ALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLK- 759
K V + ++LN + +E N ++++ + ++ + + + ++ L+ N K
Sbjct: 891 LQKKFVTKQSELNSSED--ILEDMNSNLQVLKRERDGIKEDIEKFDLE-RVTALK-NCKI 946
Query: 760 QHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTI--EEL 817
+ + + + +D ++A + SI L K++ E T +EL
Sbjct: 947 SNINIPISSETTIDDLPISSTD-----NEAITISNSIDINYKGLPKKYKENNTDSARKEL 1001
Query: 818 EAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKW 877
E I + + + + N L+ Y+ + + E ++ + E K E K+ L + +K+K
Sbjct: 1002 EQKIHE-VEEILNELQPNARALERYDEAEGRFEVINNETEQLKAEEKKILNQFLKIKKKR 1060
Query: 878 LPTLRNLVAQINETFSRNFQEMA---------VAGEVSLDEHESDFDKFGILIKVKFRQS 928
+++ ++E+ G SL + D + F +K+ +
Sbjct: 1061 KELFEKTFDYVSDHLDAIYRELTKNPNSNVELAGGNASLTIEDED-EPFNA--GIKYHAT 1117
Query: 929 GQLEVLS-AHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKM 981
L+ + SGGE++V+ + L ++ PF V+DE++ +D N +++
Sbjct: 1118 PPLKRFKDMEYLSGGEKTVAALALLFAINSYQPSPFFVLDEVDAALDITNVQRI 1171
Score = 113 (44.8 bits), Expect = 6.3e-10, Sum P(3) = 6.3e-10
Identities = 63/250 (25%), Positives = 104/250 (41%)
Query: 21 GNIIEIELHNFMTFDHLICKPG---SRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRA 77
G ++ +EL NF ++ + K G S +IGPNGSGKS+++ AI+ LG + L R+
Sbjct: 2 GRLVGLELSNFKSYRG-VTKVGFGESNFTSIIGPNGSGKSNMMDAISFVLGVRSNHL-RS 59
Query: 78 TSIGAYVKRG----EESG-YIKISLRGDT-----------KEEHLTIMRKIDTRN-KSEW 120
+ + RG E S Y K L + +I +RN + +
Sbjct: 60 NILKDLIYRGVLNDENSDDYDNEGAASSNPQSAYVKAFYQKGNKLVELMRIISRNGDTSY 119
Query: 121 FFNGKVVPKGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLP 180
+GK V + + NI + + Q V + A SPV+L E+ G Q
Sbjct: 120 KIDGKTVSYKDYSIFLENENILIKAKNFLVFQGDVEQIAAQSPVELSRMFEEVSGSIQYK 179
Query: 181 VQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKK 240
++ L EK KL +N ++ L +E + R +L +K E K +
Sbjct: 180 KEYEELKEKIEKLSKSATESIKNRRRIHG--ELKTYKEGINKNEEYRKQLDKKNELQKFQ 237
Query: 241 LPWLKYDMKK 250
W Y +++
Sbjct: 238 ALWQLYHLEQ 247
Score = 75 (31.5 bits), Expect = 8.2e-05, Sum P(2) = 8.2e-05
Identities = 57/284 (20%), Positives = 120/284 (42%)
Query: 646 EQRLIEDEAAKLQ---KEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTAL 702
E +I + +KL K++E++++ +++ K ++ I+ ++++ES++K D+
Sbjct: 287 ESAVISKQKSKLDYIFKDKEKLVSDLRLIKVPQQAAGKRISHIEKRIESLQK--DL---- 340
Query: 703 AKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQ-- 760
Q +++F+ +++ + K ++ E+ S K + E +LK
Sbjct: 341 -----QRQKTYVERFETQLKV------VTRSKEAFEEEIKQSARNYDKFKLNENDLKTYN 389
Query: 761 --HEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELE 818
HEK + E+ + + ++ + + + A I+ E E+ T E+L+
Sbjct: 390 CLHEKYLTEGGSILEEKIAVLNNDKREIQEELERFNKRADISKRRITE--ELSITGEKLD 447
Query: 819 AAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKK-ELKRFLAEIDALKEKW 877
+ D N L+ L E + Q IE + QE D +L+ L +ID L
Sbjct: 448 TQLNDLRVSLNEKNALHTERLHELKKLQSDIES-ANNQEYDLNFKLRETLVKIDDLSANQ 506
Query: 878 LPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILI 921
T++ + N + F V G V D +K+G+ +
Sbjct: 507 RETMKERKLRENIAMLKRFFP-GVKGLVH-DLCHPKKEKYGLAV 548
Score = 58 (25.5 bits), Expect = 6.3e-10, Sum P(3) = 6.3e-10
Identities = 25/90 (27%), Positives = 40/90 (44%)
Query: 363 YEPPHDKIEKLGSQILE--LGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNN 420
Y H+K G ILE + V N KR + E E+ + ++ R+ ++ L +K +
Sbjct: 388 YNCLHEKYLTEGGSILEEKIAVLNNDKREIQEELERFNKRADISKRRITEELSITGEKLD 447
Query: 421 KLLHALRNSGAENIFEAYCWLQQHRHELNK 450
L+ LR S + E + HEL K
Sbjct: 448 TQLNDLRVS----LNEKNALHTERLHELKK 473
Score = 56 (24.8 bits), Expect = 0.00048, Sum P(3) = 0.00048
Identities = 49/210 (23%), Positives = 92/210 (43%)
Query: 656 KLQKEREEIINIVQIEKRKRREMENHINLRKRKLESI------EKED-DINTALAKLVDQ 708
KL + +E+ N + + RE+EN ++L + ++ +K D N K +
Sbjct: 691 KLLIQIDELSNGQRSNSIRAREVENSVSLLNSDIANLRTQVTQQKRSLDENRLEIKYHND 750
Query: 709 AADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMA---SI--EFDAKIRELEFNLKQHE- 762
+ IQ K E+K L ++ + K + ++ A +I EF +KI F +K++E
Sbjct: 751 LIEKEIQP-KIT-ELKKKLDDLENTKDNLVKEKEALQNNIFKEFTSKIG---FTIKEYEN 805
Query: 763 ---KLALQASLHYEDCKKEVEHCRKHLS-DAKRQAES---IAFITPELEKEFLEMPTTIE 815
+L Q S + +K++ L + R + + +LE +EM + +E
Sbjct: 806 HSGELMRQQSKELQQLQKQILTVENKLQFETDRLSTTQRRYEKAQKDLENAQVEMKS-LE 864
Query: 816 ELEAAIQDNISQANSIFFLNQNILQEYEHR 845
E E AI+ I S ++N L E + +
Sbjct: 865 EQEYAIEMKIGSIESKLEEHKNHLDELQKK 894
Score = 54 (24.1 bits), Expect = 0.00076, Sum P(3) = 0.00076
Identities = 37/228 (16%), Positives = 107/228 (46%)
Query: 649 LIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKE-DDINTALAKLVD 707
L+ ++ +LQ+ +++I+ + E + + E + ++ +R+ E +K+ ++ + L +
Sbjct: 810 LMRQQSKELQQLQKQILTV---ENKLQFETDR-LSTTQRRYEKAQKDLENAQVEMKSLEE 865
Query: 708 Q--AADLNIQQFKYAIEI-KNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLK--QHE 762
Q A ++ I + +E KN L E+ K+ + + S E D + ++ NL+ + E
Sbjct: 866 QEYAIEMKIGSIESKLEEHKNHLDELQK-KFVTKQSELNSSE-DI-LEDMNSNLQVLKRE 922
Query: 763 KLALQASLHYEDCKK--EVEHCRKHLSDAKRQAESIAFITP--ELEKEFLEMPTTIEELE 818
+ ++ + D ++ +++C+ + +E+ P + E + + +I+
Sbjct: 923 RDGIKEDIEKFDLERVTALKNCKISNINIPISSETTIDDLPISSTDNEAITISNSIDINY 982
Query: 819 AAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRF 866
+ + N+ + +E E + ++E++ + + + + L+R+
Sbjct: 983 KGLPKKYKENNT-----DSARKELEQKIHEVEEILNELQPNARALERY 1025
Score = 50 (22.7 bits), Expect = 4.1e-09, Sum P(3) = 4.1e-09
Identities = 14/51 (27%), Positives = 25/51 (49%)
Query: 382 VQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAE 432
++ K LQ+ +K+ + +NKL +DRL + + K L N+ E
Sbjct: 811 MRQQSKELQQLQKQILTVENKLQFE--TDRLSTTQRRYEKAQKDLENAQVE 859
Score = 46 (21.3 bits), Expect = 1.0e-08, Sum P(3) = 1.0e-08
Identities = 13/53 (24%), Positives = 27/53 (50%)
Query: 371 EKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLL 423
EKL +Q+ +L V N+K +E+ L + + + +++ D+ K + L
Sbjct: 444 EKLDTQLNDLRVSLNEKNALHTERLHELKKLQSDIESANNQEYDLNFKLRETL 496
Score = 44 (20.5 bits), Expect = 1.6e-08, Sum P(3) = 1.6e-08
Identities = 9/36 (25%), Positives = 25/36 (69%)
Query: 388 RLQKSEKEKILNQNKLTLRQCSDRL-KDMEDKNNKL 422
R Q +++++ L++N+L ++ +D + K+++ K +L
Sbjct: 728 RTQVTQQKRSLDENRLEIKYHNDLIEKEIQPKITEL 763
>UNIPROTKB|C9JMN1 [details] [associations]
symbol:SMC6 "Structural maintenance of chromosomes protein
6" species:9606 "Homo sapiens" [GO:0000724 "double-strand break
repair via homologous recombination" evidence=IEA] [GO:0030915
"Smc5-Smc6 complex" evidence=IEA] InterPro:IPR027132 EMBL:AC093731
PANTHER:PTHR19306:SF2 EMBL:AC097377 IPI:IPI00816217 HGNC:HGNC:20466
HOGENOM:HOG000286038 ChiTaRS:SMC6 ProteinModelPortal:C9JMN1
SMR:C9JMN1 STRING:C9JMN1 Ensembl:ENST00000446852 UCSC:uc002rcq.2
ArrayExpress:C9JMN1 Bgee:C9JMN1 Uniprot:C9JMN1
Length = 740
Score = 136 (52.9 bits), Expect = 9.0e-10, Sum P(3) = 9.0e-10
Identities = 55/206 (26%), Positives = 98/206 (47%)
Query: 55 GKSSLVCAIALALGGDTQLLGRATSIGAYVKRGEESGYIKISLR--GDTK---------- 102
GKS+++ A+ + LGG R +S+ +VK G+ S I I+LR GD
Sbjct: 107 GKSAVLTALIVGLGGRAVATNRGSSLKGFVKDGQNSADISITLRNRGDDAFKASVYGNSI 166
Query: 103 --EEHLTIMRKIDTRNKSEWFFNGKVVP--KGEVLEITKRFNIQVNNLTQFLPQDRVCEF 158
++H++I + KS G VV K E++ I FNIQV+N L Q+ +F
Sbjct: 167 LIQQHISIDGSRSYKLKSA---TGSVVSTRKEELIAILDHFNIQVDNPVSVLTQEMSKQF 223
Query: 159 AKL-SPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQ 217
+ + + KA Q+ + ++E +K +T E + + + L +LK VE+
Sbjct: 224 LQSKNEGDKYKFFMKATQLEQMKEDYSYIME--TKERTKE-QIHQGEERLTELKRQCVEK 280
Query: 218 EKDVERVRQRAELLEKVESMKKKLPW 243
E+ + + + + +ES+K ++ W
Sbjct: 281 EERFQSIAGLSTMKTNLESLKHEMAW 306
Score = 81 (33.6 bits), Expect = 9.0e-10, Sum P(3) = 9.0e-10
Identities = 49/225 (21%), Positives = 104/225 (46%)
Query: 656 KLQKEREEIINIVQIEKRKRREMENHINLRKRKL-ESIEKEDDINTALAKLVDQAADLNI 714
+++K+ I + ++I + + ++ + ++ +L E+ +K DI L K+ ++ N
Sbjct: 311 EIEKQLNAIRDNIKIGEDRAARLDRKMEEQQVRLNEAEQKYKDIQDKLEKISEET---NA 367
Query: 715 QQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYED 774
+ A E L ++V+ K +Y E A + ++ + E + K E+L + E+
Sbjct: 368 R----APECMALKADVVAKKRAYNE---AEVLYNRSLNEYKALKKDDEQLCKRI----EE 416
Query: 775 CKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTT----IEELEAAIQDNISQANS 830
KK + + +RQ + I+++ E K F + IE+ + AI+ + +
Sbjct: 417 LKKSTDQSLEP-ERLERQ-KKISWLK-ERVKAFQNQENSVNQEIEQFQQAIEKDKEEHGK 473
Query: 831 IFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKE 875
I ++ + QRQ+++L + D+ LKRF + AL E
Sbjct: 474 IKREELDVKHALSYNQRQLKELKDSK-TDR--LKRFGPNVPALLE 515
Score = 59 (25.8 bits), Expect = 9.0e-10, Sum P(3) = 9.0e-10
Identities = 18/34 (52%), Positives = 20/34 (58%)
Query: 23 IIE-IELHNFMTFDHL-ICKPGSRLNLVIGPNGS 54
IIE I L NFM L K GS +N V+G NGS
Sbjct: 47 IIESIHLKNFMCHSMLGPFKFGSNVNFVVGNNGS 80
Score = 49 (22.3 bits), Expect = 3.7e-07, Sum P(4) = 3.7e-07
Identities = 9/23 (39%), Positives = 16/23 (69%)
Query: 754 LEFNLKQHEKLALQASLHYEDCK 776
LE ++K +E+L + LHY++ K
Sbjct: 718 LEKDIKHNEELLKRCQLHYKELK 740
Score = 47 (21.6 bits), Expect = 3.7e-07, Sum P(4) = 3.7e-07
Identities = 11/55 (20%), Positives = 31/55 (56%)
Query: 368 DKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKL 422
++IEK + I + ++ + R + +++ + + ++ L + + KD++DK K+
Sbjct: 310 NEIEKQLNAIRD-NIKIGEDRAARLDRK--MEEQQVRLNEAEQKYKDIQDKLEKI 361
Score = 42 (19.8 bits), Expect = 1.8e-06, Sum P(4) = 1.8e-06
Identities = 9/38 (23%), Positives = 19/38 (50%)
Query: 744 SIEFDAKIRELEFNLKQHEKLALQASLHYEDCKKEVEH 781
S + D++I +LE ++ L H +K+++H
Sbjct: 687 SRDVDSEISDLENEVENKTAQILNLQQHLSALEKDIKH 724
Score = 41 (19.5 bits), Expect = 9.0e-06, Sum P(3) = 9.0e-06
Identities = 13/49 (26%), Positives = 26/49 (53%)
Query: 368 DKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDME 416
+++E +QIL L Q+ L EK+ + N+ L++C K+++
Sbjct: 699 NEVENKTAQILNL-----QQHLSALEKD--IKHNEELLKRCQLHYKELK 740
Score = 39 (18.8 bits), Expect = 2.2e-06, Sum P(4) = 2.2e-06
Identities = 14/46 (30%), Positives = 27/46 (58%)
Query: 651 EDEAAKLQKEREEI-INIVQIEKRKRREMENHINLRKRKLESIEKE 695
ED AA+L ++ EE + + + E+ K +++++ KLE I +E
Sbjct: 327 EDRAARLDRKMEEQQVRLNEAEQ-KYKDIQD-------KLEKISEE 364
>UNIPROTKB|I3LPL1 [details] [associations]
symbol:I3LPL1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030915 "Smc5-Smc6 complex" evidence=IEA] [GO:0000724
"double-strand break repair via homologous recombination"
evidence=IEA] InterPro:IPR027131 PANTHER:PTHR19306:SF1
GeneTree:ENSGT00550000074963 EMBL:CU074416
Ensembl:ENSSSCT00000030411 OMA:DAFSATQ Uniprot:I3LPL1
Length = 241
Score = 165 (63.1 bits), Expect = 9.4e-10, P = 9.4e-10
Identities = 45/190 (23%), Positives = 93/190 (48%)
Query: 389 LQKSEKEKILNQNKLTLRQCSDRLKD-MEDKNNKLLHALRNSGAENIFEAYCWLQQHRHE 447
+ K +++ L + K ++ R + M K +KL R++ ++A WL+ +R +
Sbjct: 44 IDKRREKETLEKEKKSVDDHIVRFDNLMNQKEDKLRQRYRDT-----YDAVLWLRSNRDK 98
Query: 448 LNKEAYGPVLLEVNVSNRAHANYLEDHVGHYIWKSFITQDAGDRDFLAKNLKPFDVPILN 507
+ P++L +N+ + +A Y+E+H+ ++F+ + D + K ++ +N
Sbjct: 99 FKQRVCEPIMLTINMKDNKNAKYIENHISSNDLRAFVFESQEDMEVFLKEVRDNKKLRVN 158
Query: 508 YV-SNESSR--KEPFQISEEMRALGISARLDQVFDAPHAVKEVLISQFGLDSSYIGSKET 564
V + ESS K P + E++ G + L ++FDAP V L Q+ + +G++ T
Sbjct: 159 AVIAPESSYADKVPSRSLNELKQYGFFSYLRELFDAPDPVMSYLCRQYHIHEVPVGTERT 218
Query: 565 DQKADNVAKL 574
+ + V KL
Sbjct: 219 REIIEQVKKL 228
>UNIPROTKB|E9PD53 [details] [associations]
symbol:SMC4 "Structural maintenance of chromosomes protein"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005694 "chromosome" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA] [GO:0030261
"chromosome condensation" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0005694 GO:GO:0006281 GO:GO:0006310 GO:GO:0030261
GO:GO:0007062 SUPFAM:SSF75553 EMBL:AC024221 HGNC:HGNC:14013
IPI:IPI00793575 ProteinModelPortal:E9PD53 SMR:E9PD53
Ensembl:ENST00000469762 UCSC:uc003fdi.3 ArrayExpress:E9PD53
Bgee:E9PD53 Uniprot:E9PD53
Length = 1263
Score = 138 (53.6 bits), Expect = 1.2e-09, Sum P(3) = 1.2e-09
Identities = 71/344 (20%), Positives = 154/344 (44%)
Query: 651 EDEAAKLQKEREEIINIV---QIE----KRKRREMENHINLRKRKLESIEKE-DDINTAL 702
+D+ K+ K+ +E + + Q+ R ++ ++ + +++++ EKE DD+ L
Sbjct: 878 QDKLDKINKQLDECASAITKAQVAIKTADRNLQKAQDSVLRTEKEIKDTEKEVDDLTAEL 937
Query: 703 AKLVDQAADL--NIQQFKYAI-EI----KNLLVEIVSCKWSYAEKHMASIEFDAKIRELE 755
L D+AA++ N + ++ EI +NLL E+ + + ++ K+ +++
Sbjct: 938 KSLEDKAAEVVKNTNAAEESLPEIQKEHRNLLQELKVIQENEHALQKDALSIKLKLEQID 997
Query: 756 FNLKQHEKLALQASLHYEDCKKEVEHCRKH-LSDAKRQAESIAFITPELEKEFLEMPTTI 814
++ +H + + Y KE+ H + D E I+ ++PE + E ++ P +I
Sbjct: 998 GHIAEHN-----SKIKY--WHKEISKISLHPIED--NPIEEISVLSPE-DLEAIKNPDSI 1047
Query: 815 EELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKR--FLAEIDA 872
A ++ + N + EY+ ++ L E DK +R F +
Sbjct: 1048 TNQIALLEARCHEMKP----NLGAIAEYKKKEELY--LQRVAELDKITYERDSFRQAYED 1101
Query: 873 LKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKF--GILIKVKFRQSGQ 930
L+++ L I N+Q + + G+ L+ +S D F GI+ V+ +
Sbjct: 1102 LRKQRLNEFMAGFYIITNKLKENYQMLTLGGDAELELVDS-LDPFSEGIMFSVRPPKKSW 1160
Query: 931 LEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMD 974
++ + SGGE+++S++ + +L P +DEI+ +D
Sbjct: 1161 KKIFNL---SGGEKTLSSLALVFALHHYKPTPLYFMDEIDAALD 1201
Score = 104 (41.7 bits), Expect = 1.2e-09, Sum P(3) = 1.2e-09
Identities = 73/329 (22%), Positives = 137/329 (41%)
Query: 23 IIEIELHNFMTF-DHLICKP-GSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI 80
I I NF ++ I P R + +IGPNGSGKS+++ ++ G Q + R+ +
Sbjct: 59 ITHIVNQNFKSYAGEKILGPFHKRFSCIIGPNGSGKSNVIDSMLFVFGYRAQKI-RSKKL 117
Query: 81 GAYVKRGEESGYIK-----------ISLRGDTKE----EHLTIMRKIDTRNKSEWFFNGK 125
+ +E I+ I GD E + + R N S + +GK
Sbjct: 118 SVLIHNSDEHKDIQSCTVEVHFQKIIDKEGDDYEVIPNSNFYVSRTACRDNTSVYHISGK 177
Query: 126 VVPKGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCA 185
+V + + I +++ + Q V + A + P K E ++ + + + C
Sbjct: 178 KKTFKDVGNLLRSHGIDLDHNRFLILQGEVEQIAMMKP-KGQTEHDEGMLEYLEDIIGCG 236
Query: 186 LVEKSSKL--KTIECTVKRNGDTLNQLKALNVEQEKD-VERVRQRA-ELLE-KVESMKKK 240
+ + K+ + +E + G+ LN++K VE+EKD +E + A E L + E +KK
Sbjct: 237 RLNEPIKVLCRRVEILNEHRGEKLNRVKM--VEKEKDALEGEKNIAIEFLTLENEIFRKK 294
Query: 241 LPWLKYDMKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPI--EGKKQEKAILDGDCKKL 298
+Y + + + ++E S + E K + K + D + KKL
Sbjct: 295 NHVCQYYIYELQ--KRIAEMETQKEKIHEDTKEINEKSNILSNEMKAKNKDVKDTE-KKL 351
Query: 299 SSLINENSKRRMDFLEKVDQGVQVQGKYK 327
+ + + + F + + VQV+ K K
Sbjct: 352 NKITKFIEENKEKFTQLDLEDVQVREKLK 380
Score = 83 (34.3 bits), Expect = 0.00046, Sum P(3) = 0.00046
Identities = 52/252 (20%), Positives = 105/252 (41%)
Query: 651 EDEAAKLQKE-REEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQA 709
E+E K++ + + + +QI+++K + E + LR + E + ++ +L++Q
Sbjct: 748 EEEVNKMESQLQNDSKKAMQIQEQKVQLEERVVKLRHSEREMRNTLEKFTASIQRLIEQE 807
Query: 710 ADLNIQQFKYAIEI---------KNLLVEIVSC-KWSY---AEKHMASIEFDAK-IRELE 755
LN+Q + + + LL E VS K Y AEK +E + K +
Sbjct: 808 EYLNVQVKELEANVLATAPDKKKQKLLEENVSAFKTEYDAVAEK-AGKVEAEVKRLHNTI 866
Query: 756 FNLKQHEKLALQASL-----HYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEM 810
+ H+ A Q L ++C + + + A R + EKE +
Sbjct: 867 VEINNHKLKAQQDKLDKINKQLDECASAITKAQVAIKTADRNLQKAQDSVLRTEKEIKDT 926
Query: 811 PTTIEELEAAIQDNISQANSIFFLNQNILQEY------EHRQ--RQIEDLSTKQEADKKE 862
+++L A ++ +A + N N +E EHR ++++ + + A +K+
Sbjct: 927 EKEVDDLTAELKSLEDKAAEVV-KNTNAAEESLPEIQKEHRNLLQELKVIQENEHALQKD 985
Query: 863 ---LKRFLAEID 871
+K L +ID
Sbjct: 986 ALSIKLKLEQID 997
Score = 78 (32.5 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 50/228 (21%), Positives = 87/228 (38%)
Query: 99 GDTKEEHLTIMRKIDTRN--KSEWFFNGKVVPKG-EVLEITKRFNIQVNNLTQ--FLPQD 153
G E + R+++ N + E K+V K + LE K I+ L F ++
Sbjct: 236 GRLNEPIKVLCRRVEILNEHRGEKLNRVKMVEKEKDALEGEKNIAIEFLTLENEIFRKKN 295
Query: 154 RVCEFAKLSPVKLLEETE---KAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQL 210
VC++ K + E E + + + + + + S+++K VK LN++
Sbjct: 296 HVCQYYIYELQKRIAEMETQKEKIHEDTKEINEKSNI-LSNEMKAKNKDVKDTEKKLNKI 354
Query: 211 -KALNVEQEK----DVERVRQRAELLEKVESMKKKLPWLKYDMKKAEYIXXXXXXXXXXX 265
K + +EK D+E V+ R +L KK L+ D +K E
Sbjct: 355 TKFIEENKEKFTQLDLEDVQVREKLKHATSKAKKLEKQLQKDKEKVEEFKSIPAKSNNII 414
Query: 266 XXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENSKRRMDFL 313
N E K E KK K ++D ++ L E R + +
Sbjct: 415 NETTTRNNALEKEKEKEEKKL-KEVMDSLKQETQGLQKEKESREKELM 461
Score = 42 (19.8 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 13/53 (24%), Positives = 28/53 (52%)
Query: 370 IEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKL 422
I +L +I E+ Q ++++ + KE I ++ + + + KD++D KL
Sbjct: 302 IYELQKRIAEMETQ--KEKIHEDTKE-INEKSNILSNEMKAKNKDVKDTEKKL 351
Score = 41 (19.5 bits), Expect = 1.2e-09, Sum P(3) = 1.2e-09
Identities = 16/64 (25%), Positives = 28/64 (43%)
Query: 371 EKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLH--ALRN 428
EK LE VQ +K + K K L + ++ + K + K+N +++ RN
Sbjct: 363 EKFTQLDLE-DVQVREKLKHATSKAKKLEKQLQKDKEKVEEFKSIPAKSNNIINETTTRN 421
Query: 429 SGAE 432
+ E
Sbjct: 422 NALE 425
>UNIPROTKB|Q9NTJ3 [details] [associations]
symbol:SMC4 "Structural maintenance of chromosomes protein
4" species:9606 "Homo sapiens" [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0010032 "meiotic chromosome
condensation" evidence=IEA] [GO:0045132 "meiotic chromosome
segregation" evidence=IEA] [GO:0051383 "kinetochore organization"
evidence=IEA] [GO:0000796 "condensin complex" evidence=IDA;TAS]
[GO:0007076 "mitotic chromosome condensation" evidence=IDA]
[GO:0046982 "protein heterodimerization activity" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA;TAS] [GO:0000070 "mitotic sister
chromatid segregation" evidence=TAS] [GO:0005524 "ATP binding"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
Reactome:REACT_115566 Reactome:REACT_21300
Pathway_Interaction_DB:aurora_b_pathway GO:GO:0051301 EMBL:CH471052
GO:GO:0006281 GO:GO:0006310 GO:GO:0007076 GO:GO:0000796
GO:GO:0007062 eggNOG:COG1196 KO:K06675 SUPFAM:SSF75553
EMBL:AC024221 OMA:IAIEFLT EMBL:AB019987 EMBL:AL136877 EMBL:AL833949
EMBL:AF092564 IPI:IPI00328298 IPI:IPI00411559 PIR:T46486
RefSeq:NP_001002800.1 RefSeq:NP_005487.3 UniGene:Hs.58992
ProteinModelPortal:Q9NTJ3 SMR:Q9NTJ3 IntAct:Q9NTJ3
MINT:MINT-5005675 STRING:Q9NTJ3 PhosphoSite:Q9NTJ3 DMDM:30173386
PaxDb:Q9NTJ3 PeptideAtlas:Q9NTJ3 PRIDE:Q9NTJ3 DNASU:10051
Ensembl:ENST00000344722 Ensembl:ENST00000357388
Ensembl:ENST00000360111 Ensembl:ENST00000462787 GeneID:10051
KEGG:hsa:10051 UCSC:uc003fdh.3 UCSC:uc010hwd.3 CTD:10051
GeneCards:GC03P160117 HGNC:HGNC:14013 HPA:HPA018259 HPA:HPA029449
MIM:605575 neXtProt:NX_Q9NTJ3 PharmGKB:PA37834 HOGENOM:HOG000184777
HOVERGEN:HBG106696 InParanoid:Q9NTJ3 OrthoDB:EOG4PZJ5V
PhylomeDB:Q9NTJ3 GenomeRNAi:10051 NextBio:37969 ArrayExpress:Q9NTJ3
Bgee:Q9NTJ3 CleanEx:HS_SMC4 Genevestigator:Q9NTJ3
GermOnline:ENSG00000113810 Uniprot:Q9NTJ3
Length = 1288
Score = 138 (53.6 bits), Expect = 1.2e-09, Sum P(3) = 1.2e-09
Identities = 71/344 (20%), Positives = 154/344 (44%)
Query: 651 EDEAAKLQKEREEIINIV---QIE----KRKRREMENHINLRKRKLESIEKE-DDINTAL 702
+D+ K+ K+ +E + + Q+ R ++ ++ + +++++ EKE DD+ L
Sbjct: 903 QDKLDKINKQLDECASAITKAQVAIKTADRNLQKAQDSVLRTEKEIKDTEKEVDDLTAEL 962
Query: 703 AKLVDQAADL--NIQQFKYAI-EI----KNLLVEIVSCKWSYAEKHMASIEFDAKIRELE 755
L D+AA++ N + ++ EI +NLL E+ + + ++ K+ +++
Sbjct: 963 KSLEDKAAEVVKNTNAAEESLPEIQKEHRNLLQELKVIQENEHALQKDALSIKLKLEQID 1022
Query: 756 FNLKQHEKLALQASLHYEDCKKEVEHCRKH-LSDAKRQAESIAFITPELEKEFLEMPTTI 814
++ +H + + Y KE+ H + D E I+ ++PE + E ++ P +I
Sbjct: 1023 GHIAEHN-----SKIKY--WHKEISKISLHPIED--NPIEEISVLSPE-DLEAIKNPDSI 1072
Query: 815 EELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKR--FLAEIDA 872
A ++ + N + EY+ ++ L E DK +R F +
Sbjct: 1073 TNQIALLEARCHEMKP----NLGAIAEYKKKEELY--LQRVAELDKITYERDSFRQAYED 1126
Query: 873 LKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKF--GILIKVKFRQSGQ 930
L+++ L I N+Q + + G+ L+ +S D F GI+ V+ +
Sbjct: 1127 LRKQRLNEFMAGFYIITNKLKENYQMLTLGGDAELELVDS-LDPFSEGIMFSVRPPKKSW 1185
Query: 931 LEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMD 974
++ + SGGE+++S++ + +L P +DEI+ +D
Sbjct: 1186 KKIFNL---SGGEKTLSSLALVFALHHYKPTPLYFMDEIDAALD 1226
Score = 104 (41.7 bits), Expect = 1.2e-09, Sum P(3) = 1.2e-09
Identities = 73/329 (22%), Positives = 137/329 (41%)
Query: 23 IIEIELHNFMTF-DHLICKP-GSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI 80
I I NF ++ I P R + +IGPNGSGKS+++ ++ G Q + R+ +
Sbjct: 84 ITHIVNQNFKSYAGEKILGPFHKRFSCIIGPNGSGKSNVIDSMLFVFGYRAQKI-RSKKL 142
Query: 81 GAYVKRGEESGYIK-----------ISLRGDTKE----EHLTIMRKIDTRNKSEWFFNGK 125
+ +E I+ I GD E + + R N S + +GK
Sbjct: 143 SVLIHNSDEHKDIQSCTVEVHFQKIIDKEGDDYEVIPNSNFYVSRTACRDNTSVYHISGK 202
Query: 126 VVPKGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCA 185
+V + + I +++ + Q V + A + P K E ++ + + + C
Sbjct: 203 KKTFKDVGNLLRSHGIDLDHNRFLILQGEVEQIAMMKP-KGQTEHDEGMLEYLEDIIGCG 261
Query: 186 LVEKSSKL--KTIECTVKRNGDTLNQLKALNVEQEKD-VERVRQRA-ELLE-KVESMKKK 240
+ + K+ + +E + G+ LN++K VE+EKD +E + A E L + E +KK
Sbjct: 262 RLNEPIKVLCRRVEILNEHRGEKLNRVKM--VEKEKDALEGEKNIAIEFLTLENEIFRKK 319
Query: 241 LPWLKYDMKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPI--EGKKQEKAILDGDCKKL 298
+Y + + + ++E S + E K + K + D + KKL
Sbjct: 320 NHVCQYYIYELQ--KRIAEMETQKEKIHEDTKEINEKSNILSNEMKAKNKDVKDTE-KKL 376
Query: 299 SSLINENSKRRMDFLEKVDQGVQVQGKYK 327
+ + + + F + + VQV+ K K
Sbjct: 377 NKITKFIEENKEKFTQLDLEDVQVREKLK 405
Score = 83 (34.3 bits), Expect = 0.00049, Sum P(3) = 0.00049
Identities = 52/252 (20%), Positives = 105/252 (41%)
Query: 651 EDEAAKLQKE-REEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQA 709
E+E K++ + + + +QI+++K + E + LR + E + ++ +L++Q
Sbjct: 773 EEEVNKMESQLQNDSKKAMQIQEQKVQLEERVVKLRHSEREMRNTLEKFTASIQRLIEQE 832
Query: 710 ADLNIQQFKYAIEI---------KNLLVEIVSC-KWSY---AEKHMASIEFDAK-IRELE 755
LN+Q + + + LL E VS K Y AEK +E + K +
Sbjct: 833 EYLNVQVKELEANVLATAPDKKKQKLLEENVSAFKTEYDAVAEK-AGKVEAEVKRLHNTI 891
Query: 756 FNLKQHEKLALQASL-----HYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEM 810
+ H+ A Q L ++C + + + A R + EKE +
Sbjct: 892 VEINNHKLKAQQDKLDKINKQLDECASAITKAQVAIKTADRNLQKAQDSVLRTEKEIKDT 951
Query: 811 PTTIEELEAAIQDNISQANSIFFLNQNILQEY------EHRQ--RQIEDLSTKQEADKKE 862
+++L A ++ +A + N N +E EHR ++++ + + A +K+
Sbjct: 952 EKEVDDLTAELKSLEDKAAEVV-KNTNAAEESLPEIQKEHRNLLQELKVIQENEHALQKD 1010
Query: 863 ---LKRFLAEID 871
+K L +ID
Sbjct: 1011 ALSIKLKLEQID 1022
Score = 78 (32.5 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 50/228 (21%), Positives = 87/228 (38%)
Query: 99 GDTKEEHLTIMRKIDTRN--KSEWFFNGKVVPKG-EVLEITKRFNIQVNNLTQ--FLPQD 153
G E + R+++ N + E K+V K + LE K I+ L F ++
Sbjct: 261 GRLNEPIKVLCRRVEILNEHRGEKLNRVKMVEKEKDALEGEKNIAIEFLTLENEIFRKKN 320
Query: 154 RVCEFAKLSPVKLLEETE---KAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQL 210
VC++ K + E E + + + + + + S+++K VK LN++
Sbjct: 321 HVCQYYIYELQKRIAEMETQKEKIHEDTKEINEKSNI-LSNEMKAKNKDVKDTEKKLNKI 379
Query: 211 -KALNVEQEK----DVERVRQRAELLEKVESMKKKLPWLKYDMKKAEYIXXXXXXXXXXX 265
K + +EK D+E V+ R +L KK L+ D +K E
Sbjct: 380 TKFIEENKEKFTQLDLEDVQVREKLKHATSKAKKLEKQLQKDKEKVEEFKSIPAKSNNII 439
Query: 266 XXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENSKRRMDFL 313
N E K E KK K ++D ++ L E R + +
Sbjct: 440 NETTTRNNALEKEKEKEEKKL-KEVMDSLKQETQGLQKEKESREKELM 486
Score = 42 (19.8 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 13/53 (24%), Positives = 28/53 (52%)
Query: 370 IEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKL 422
I +L +I E+ Q ++++ + KE I ++ + + + KD++D KL
Sbjct: 327 IYELQKRIAEMETQ--KEKIHEDTKE-INEKSNILSNEMKAKNKDVKDTEKKL 376
Score = 41 (19.5 bits), Expect = 1.2e-09, Sum P(3) = 1.2e-09
Identities = 16/64 (25%), Positives = 28/64 (43%)
Query: 371 EKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLH--ALRN 428
EK LE VQ +K + K K L + ++ + K + K+N +++ RN
Sbjct: 388 EKFTQLDLE-DVQVREKLKHATSKAKKLEKQLQKDKEKVEEFKSIPAKSNNIINETTTRN 446
Query: 429 SGAE 432
+ E
Sbjct: 447 NALE 450
>UNIPROTKB|Q9X1X1 [details] [associations]
symbol:rad50 "Probable DNA double-strand break repair Rad50
ATPase" species:243274 "Thermotoga maritima MSB8" [GO:0005515
"protein binding" evidence=IPI] GO:GO:0005524 GO:GO:0046872
GO:GO:0006281 GO:GO:0016787 EMBL:AE000512 GenomeReviews:AE000512_GR
eggNOG:COG0419 InterPro:IPR013134 PROSITE:PS51131 PIR:D72230
RefSeq:NP_229436.1 PDB:3QF7 PDB:3QG5 PDB:3THO PDBsum:3QF7
PDBsum:3QG5 PDBsum:3THO ProteinModelPortal:Q9X1X1 IntAct:Q9X1X1
GeneID:897923 KEGG:tma:TM1636 PATRIC:23938246 KO:K03546 OMA:LVITHID
ProtClustDB:CLSK875880 Uniprot:Q9X1X1
Length = 852
Score = 125 (49.1 bits), Expect = 1.4e-09, Sum P(3) = 1.4e-09
Identities = 57/238 (23%), Positives = 112/238 (47%)
Query: 666 NIVQIEKRKRREMENHINLRKRKLESIEK-EDDINTALAKLVDQAADLNIQQFKY-AIEI 723
N+ ++E+ RR + R+++L SIEK E++ L KL+D+ + L K+ A +I
Sbjct: 367 NLTRLEEEFRR-LVGEKEKREKELLSIEKTENETKNELEKLLDELSILKKDHMKWLAYQI 425
Query: 724 KNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKL-----ALQASLHY-EDCKK 777
+ L E +C + F K+ +EFN+ + EKL L+ +L+ ++ KK
Sbjct: 426 ASSLNEGDTCP-------VCGGVFHGKVEAVEFNIDEFEKLDQKRSELENTLNVLKERKK 478
Query: 778 E----VEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSI-- 831
+E + + K+ +SI ++E+E + + E+LE + + + I
Sbjct: 479 SLSSLIEDLLMKIEEGKKNLKSIRNQIEKIEEELHRLGYS-EDLEEKLDEKRKKLRKIEE 537
Query: 832 --FFLNQNILQ---EYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNL 884
++Q I + + Q++++ + EA ++ LK E+D LK + LR +
Sbjct: 538 ERHSISQKITAADVQISQIENQLKEIKGEIEAKRETLKEQREEMDQLKSDFFDRLRKI 595
Score = 113 (44.8 bits), Expect = 1.4e-09, Sum P(3) = 1.4e-09
Identities = 65/245 (26%), Positives = 111/245 (45%)
Query: 26 IELHNFMTFDHLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSIGAYVK 85
+ + NF+ ++ + S + +V GPNG+GKSSL AI+ AL G+ R + YV
Sbjct: 6 LTVRNFLGLKNVDIEFQSGITVVEGPNGAGKSSLFEAISFALFGNGI---RYPNSYDYVN 62
Query: 86 RGEESGYIKISLRGDTKEEHLTIMRKIDTRNK------SEWFFNGKVV-----PKGEVLE 134
R G ++ + + + I+R+I+ + SE NGK P E
Sbjct: 63 RNAVDGTARLVFQFERGGKRYEIIREINALQRKHNAKLSEILENGKKAAIAAKPTSVKQE 122
Query: 135 ITKRFNIQVNNL--TQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSK 192
+ K I+ T FLPQ + + +SP E TE + D Q +EK K
Sbjct: 123 VEKILGIEHRTFIRTVFLPQGEIDKLL-ISPPS--EITE-IISDV---FQSKETLEKLEK 175
Query: 193 LKTIECTVKRNGDTLNQLKALNVE-----QEKDVERVRQRAELLEKVESMKKKLPWLKYD 247
L ++ +K+ + ++ L+AL +E D+E ++ L+ V KK+L + +
Sbjct: 176 L--LKEKMKKLENEISSLQALYTAIWKYLEENDLEVLKSE---LKTVSEKKKELLKKREE 230
Query: 248 MKKAE 252
++K E
Sbjct: 231 LQKEE 235
Score = 109 (43.4 bits), Expect = 1.2e-08, Sum P(3) = 1.2e-08
Identities = 86/387 (22%), Positives = 175/387 (45%)
Query: 649 LIEDEAAKLQKEREEIINIV-QIEKRKRR--------EMENHINLRKRKLESIEKEDDIN 699
LIED K+++ ++ + +I QIEK + ++E ++ +++KL IE+E +
Sbjct: 483 LIEDLLMKIEEGKKNLKSIRNQIEKIEEELHRLGYSEDLEEKLDEKRKKLRKIEEER--H 540
Query: 700 TALAKLVDQAADLNIQQFKYAI-EIKNLL-VEIVSCKWSYAEKHMASIEFDAKIRELEFN 757
+ K+ AAD+ I Q + + EIK + + + K E +F ++R++
Sbjct: 541 SISQKIT--AADVQISQIENQLKEIKGEIEAKRETLKEQREEMDQLKSDFFDRLRKIGIG 598
Query: 758 LKQHEKLALQASLHYEDCKKE---VEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTI 814
++ L + +D +KE VE + L ++ ++ ES ++ +++ ++ +
Sbjct: 599 FEEFRILVKE---EVKDAEKELGVVETEIRLLEESLKELESEN--VRDVSEDYEKVRNQL 653
Query: 815 EELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKE------LKRFLA 868
E L I D + LN ++++E R+R+++ L K + E L+++L
Sbjct: 654 EALSQEISDLERKEGR---LN-HLIEETLRRERELKSLEKKLKEMSDEYNNLDLLRKYLF 709
Query: 869 EIDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQS 928
+ + T R L A + T + + ++ G +D D +K G +IK
Sbjct: 710 DKSNFSRYF--TGRVLEAVLKRT--KAYLDILTNGRFDID---FDDEKGGFIIK-----D 757
Query: 929 GQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRV--VDEINQGMDPINERKMFQQLV 986
+E A SGGER++ +I +SL ++ + +DE +D N+ K+ ++
Sbjct: 758 WGIE-RPARGLSGGERALISISLAMSLAEVASGRLDAFFIDEGFSSLDTENKEKI-ASVL 815
Query: 987 RAASQPNTPQCFLLTPKLLPDLEYSEA 1013
+ + N F+ D E+SEA
Sbjct: 816 KELERLNKVIVFITH-----DREFSEA 837
Score = 104 (41.7 bits), Expect = 3.9e-08, Sum P(3) = 3.9e-08
Identities = 54/256 (21%), Positives = 122/256 (47%)
Query: 652 DEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKE-DDINTALAKLVDQAA 710
DE KL ++R E+ N + + K +++ + + I K+E +K I + K+ ++
Sbjct: 454 DEFEKLDQKRSELENTLNVLKERKKSLSSLIEDLLMKIEEGKKNLKSIRNQIEKIEEELH 513
Query: 711 DLNIQQ-FKYAIEIKNL-LVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQA 768
L + + ++ K L +I + S ++K A+ D +I ++E LK+ K ++A
Sbjct: 514 RLGYSEDLEEKLDEKRKKLRKIEEERHSISQKITAA---DVQISQIENQLKEI-KGEIEA 569
Query: 769 SLH-YEDCKKEVEHCRKHLSDAKRQA----ESIAFITPE----LEKEFLEMPTTIEELEA 819
++ ++E++ + D R+ E + E EKE + T I LE
Sbjct: 570 KRETLKEQREEMDQLKSDFFDRLRKIGIGFEEFRILVKEEVKDAEKELGVVETEIRLLEE 629
Query: 820 AIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTK-QEADKKELK-RFLAEIDALKEKW 877
++++ + N +++ ++YE + Q+E LS + + ++KE + L E +E+
Sbjct: 630 SLKE-LESENV-----RDVSEDYEKVRNQLEALSQEISDLERKEGRLNHLIEETLRRERE 683
Query: 878 LPTLRNLVAQINETFS 893
L +L + ++++ ++
Sbjct: 684 LKSLEKKLKEMSDEYN 699
Score = 84 (34.6 bits), Expect = 1.9e-05, Sum P(3) = 1.9e-05
Identities = 60/279 (21%), Positives = 116/279 (41%)
Query: 651 EDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAA 710
E +L+ E+E I + + + + ++E K +L+ +EK + A L++Q
Sbjct: 306 EKRYKELESEKEAISKEIPVHRERLSKLEEIGEKIKEELDLLEK---VLKASRPLLEQRI 362
Query: 711 DLNIQQFKYAIEIKNLLVEIVSCKWSYA--EK--HMASIEFDAKIRELEFNLKQHEK-LA 765
L + E + L+ E + EK + E + + EL K H K LA
Sbjct: 363 RLKENLTRLEEEFRRLVGEKEKREKELLSIEKTENETKNELEKLLDELSILKKDHMKWLA 422
Query: 766 LQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNI 825
Q + E + C + E++ F E EK L+ + ELE +
Sbjct: 423 YQIA----SSLNEGDTCPVCGGVFHGKVEAVEFNIDEFEK--LDQKRS--ELENTLNVLK 474
Query: 826 SQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLV 885
+ S+ L +++L + E ++ ++ + + E ++EL R L + L+EK L R +
Sbjct: 475 ERKKSLSSLIEDLLMKIEEGKKNLKSIRNQIEKIEEELHR-LGYSEDLEEK-LDEKRKKL 532
Query: 886 AQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVK 924
+I E + + A +V + + E+ + I+ K
Sbjct: 533 RKIEEE-RHSISQKITAADVQISQIENQLKEIKGEIEAK 570
Score = 46 (21.3 bits), Expect = 1.2e-08, Sum P(3) = 1.2e-08
Identities = 19/77 (24%), Positives = 38/77 (49%)
Query: 360 VPAYEPPHDKIEKLGSQILELGVQANQKRLQKSE---KEKI-LNQNKLTLRQCSDRLKDM 415
+P + K+E++G +I E + +K L+ S +++I L +N L + RL
Sbjct: 323 IPVHRERLSKLEEIGEKIKE-ELDLLEKVLKASRPLLEQRIRLKENLTRLEEEFRRLVGE 381
Query: 416 EDKNNKLLHALRNSGAE 432
++K K L ++ + E
Sbjct: 382 KEKREKELLSIEKTENE 398
Score = 39 (18.8 bits), Expect = 1.4e-09, Sum P(3) = 1.4e-09
Identities = 10/32 (31%), Positives = 21/32 (65%)
Query: 392 SEKEKILNQNKLTLRQCSDRLKDMEDKNNKLL 423
SEK+K L + + L++ ++LK + +K +L+
Sbjct: 218 SEKKKELLKKREELQKEEEQLKRLLEKYRELV 249
>POMBASE|SPBP4H10.06c [details] [associations]
symbol:cut14 "condensin complex subunit Cut14"
species:4896 "Schizosaccharomyces pombe" [GO:0000796 "condensin
complex" evidence=IDA] [GO:0000939 "condensed chromosome inner
kinetochore" evidence=IDA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=IEA] [GO:0007062 "sister chromatid cohesion" evidence=IEA]
[GO:0007076 "mitotic chromosome condensation" evidence=IMP]
[GO:0016887 "ATPase activity" evidence=ISM] [GO:0051304 "chromosome
separation" evidence=IMP] InterPro:IPR024704 InterPro:IPR010935
InterPro:IPR027120 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 PomBase:SPBP4H10.06c Pfam:PF02463 GO:GO:0005524
GO:GO:0005737 GO:GO:0005730 GO:GO:0051301 EMBL:CU329671
GO:GO:0006281 GenomeReviews:CU329671_GR GO:GO:0016887 GO:GO:0006310
GO:GO:0007076 GO:GO:0000939 GO:GO:0000796 GO:GO:0007062
eggNOG:COG1196 SUPFAM:SSF75553 KO:K06674 PANTHER:PTHR18937:SF9
HOGENOM:HOG000163792 EMBL:D30787 PIR:S51623 RefSeq:NP_596180.1
ProteinModelPortal:P41003 IntAct:P41003 STRING:P41003
EnsemblFungi:SPBP4H10.06c.1 GeneID:2541319 KEGG:spo:SPBP4H10.06c
OMA:GTALEIC OrthoDB:EOG4P2T9B NextBio:20802429 GO:GO:0034500
Uniprot:P41003
Length = 1172
Score = 130 (50.8 bits), Expect = 1.5e-09, Sum P(3) = 1.5e-09
Identities = 74/334 (22%), Positives = 135/334 (40%)
Query: 652 DEAAKLQKEREEIINIVQIE-KRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAA 710
DE + ++ E N V++E ++ E++NH ++ L ++ E T+L K + A
Sbjct: 807 DEFTPILEKSENDYNGVKLECEQLEGELQNH----QQSL--VQGES--TTSLIKT--EIA 856
Query: 711 DLNIQQFKYAIEIKNL--LVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQA 768
+L + K L L+EI S K+S K + S+ K E E N + +L +Q
Sbjct: 857 ELELSLVNEEHNRKKLTELIEIESAKFSGLNKEIDSLSTSMKTFESEIN---NGELTIQK 913
Query: 769 SLH-YEDCKKE-------VEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAA 820
H ++ ++E + H K Q + + M E+L
Sbjct: 914 LNHEFDRLEREKSVAITAINHLEKENDWIDGQKQHFGKQGTIFDFHSQNMRQCREQLHNL 973
Query: 821 IQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPT 880
S +I +++ E ++ ++ + DKK+++ + ID K
Sbjct: 974 KPRFASMRKAINPKVMDMIDGVEKKEAKLRSMIKTIHRDKKKIQDTVKSIDRFKRS---A 1030
Query: 881 LRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVLSAHHQS 940
L ++N +F F E+ L E+ G+ I VK G + S S
Sbjct: 1031 LEKTWREVNSSFGEIFDELLPGNSAELQPPENKEFTDGLEIHVKI---GSIWKDSLAELS 1087
Query: 941 GGERSVSTILYLVSLQDLTNCPFRVVDEINQGMD 974
GG+RS+ + ++SL P ++DEI+ +D
Sbjct: 1088 GGQRSLVALALIMSLLKYKPAPMYILDEIDAALD 1121
Score = 109 (43.4 bits), Expect = 1.5e-09, Sum P(3) = 1.5e-09
Identities = 60/296 (20%), Positives = 119/296 (40%)
Query: 44 RLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSIGAYV-KRGEESGYIKISL----- 97
+ N + G NGSGKS+++ AI LG RA ++ + KRG+ +G + S+
Sbjct: 26 QFNAITGLNGSGKSNILDAICFVLGITNMSTVRAQNLQDLIYKRGQ-AGITRASVTIVFN 84
Query: 98 -RGDTK-----EEH--LTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQF 149
R E H +++ R+I S++ NG + V + + + +NN
Sbjct: 85 NRDPASSPIGFENHPQVSVTRQIIMGGTSKYLINGHRALQQNVQNLFQSVQLNINNPNFL 144
Query: 150 LPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQ 209
+ Q R+ + + ++L E+A G + K +T++ + + +N
Sbjct: 145 IMQGRITKVLNMKATEILSMIEEASGTRMFEER------KEKAFRTMQ-RKEAKVEEINT 197
Query: 210 LKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAEYIXXXXXXXXXXXXXXX 269
L L E E + ++R + + + + L L + +Y
Sbjct: 198 L--LREEIEPRLTKLRTEKKTFLEYQHIYNDLERLSHLCTAYDYYKLSLKVEELTVQASQ 255
Query: 270 XXNTLHEFSKPIEGKKQEKAILDGDCKKLSS----LINENSKRRMDF-LEKVDQGV 320
+ + E ++ KQE IL KK+ ++ +S R +D L+ V++ +
Sbjct: 256 KHSHIAEMESSLQTSKQEVLILKEKIKKIEDERMRQMSVSSDRTLDSQLQTVNENI 311
Score = 91 (37.1 bits), Expect = 7.3e-06, Sum P(3) = 7.3e-06
Identities = 54/246 (21%), Positives = 110/246 (44%)
Query: 688 KLESIEKEDDI----NTALAKLVDQAAD--LNIQQFKYAIEIKNLLVEIVSCKWSYAEKH 741
KL+S+ + D+ T V+++A L IQ+ ++++K +++V+ ++ E
Sbjct: 647 KLKSVTLDGDVYDPSGTLTGGSVNKSAGPLLQIQKLN-SLQLK---LQVVTSEYEKLETQ 702
Query: 742 MASIEF-DAKIRELE--FNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAF 798
+ ++ +A LE LKQHE L + + + +++ D K + +
Sbjct: 703 LKDLKTQNANFHRLEQEIQLKQHELTLLIEQRETDSSFRLLSDYQQYKDDVKDLKQRL-- 760
Query: 799 ITPELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEA 858
PEL++ L+ I+++E +Q+ S + +Y+H+ + + K E
Sbjct: 761 --PELDRLILQSDQAIKKIERDMQEWKHNKGSKMAELEKEFNQYKHKLDEFTPILEKSEN 818
Query: 859 DKKELKRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFG 918
D +K E + L+ + ++LV Q T S E+A E+SL E + K
Sbjct: 819 DYNGVK---LECEQLEGELQNHQQSLV-QGESTTSLIKTEIAEL-ELSLVNEEHNRKKLT 873
Query: 919 ILIKVK 924
LI+++
Sbjct: 874 ELIEIE 879
Score = 66 (28.3 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 16/47 (34%), Positives = 27/47 (57%)
Query: 372 KLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDK 418
KL ++ EL VQA+QK +E E L +K + +++K +ED+
Sbjct: 241 KLSLKVEELTVQASQKHSHIAEMESSLQTSKQEVLILKEKIKKIEDE 287
Score = 60 (26.2 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 24/96 (25%), Positives = 54/96 (56%)
Query: 164 VKLLEETEKAVGDPQLPVQHCALVEKS--SKLKTIECTVKRNGDTLNQLKALNVEQEK-D 220
V +L+E K + D ++ Q +++ S+L+T+ + R ++ +LK +E+E D
Sbjct: 274 VLILKEKIKKIEDERMR-QMSVSSDRTLDSQLQTVNENITRISTSI-ELKNTALEEEHGD 331
Query: 221 VERVRQRAELLEKV-ESMKKKLPWLK--YDMKKAEY 253
++++R +A+ LE + +K+L + Y+ +K E+
Sbjct: 332 LQQIRGKAKELETLLRGKRKRLDEVLSVYEKRKDEH 367
Score = 57 (25.1 bits), Expect = 0.00023, Sum P(3) = 0.00023
Identities = 33/185 (17%), Positives = 85/185 (45%)
Query: 69 GDTQLL-GRATSIGAYVKRGEESGYIKI-SLRGDTKEEHLTIMRKIDTRNKSEWFFN--- 123
GD Q + G+A + + RG+ ++ S+ K+EH +I + D +++ E +
Sbjct: 330 GDLQQIRGKAKELETLL-RGKRKRLDEVLSVYEKRKDEHQSISK--DFKSQEELISSLTT 386
Query: 124 GKVVPKGEVLEITKRFNIQVNNLTQFLPQDRV--CEFAKLSPVKLLEETEKAVGDPQLPV 181
G +G +++ + + L F + + L+ L + +KA +
Sbjct: 387 GLSTTEGHETGYSRKLHEARDTLNDFKAEKETNRLKLEGLNKQISLTKPKKAEATKRCDQ 446
Query: 182 QHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKL 241
+ + + ++ ++ ++K +T + + +V Q+K + + R LL +++++K KL
Sbjct: 447 LNREIDILQNHVEKLKMSLK---NTNSDITGEDVLQQKLKQLAKDRGNLLNELDALKSKL 503
Query: 242 PWLKY 246
++++
Sbjct: 504 AYMEF 508
Score = 45 (20.9 bits), Expect = 7.3e-06, Sum P(3) = 7.3e-06
Identities = 14/56 (25%), Positives = 31/56 (55%)
Query: 643 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINL-RKRKLE--SIEKE 695
++ + +E+E LQ+ R + + + + KR+ ++ +++ KRK E SI K+
Sbjct: 318 IELKNTALEEEHGDLQQIRGKAKELETLLRGKRKRLDEVLSVYEKRKDEHQSISKD 373
Score = 42 (19.8 bits), Expect = 1.5e-09, Sum P(3) = 1.5e-09
Identities = 21/65 (32%), Positives = 33/65 (50%)
Query: 371 EKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCS-DRLKDMED-KNNKLLHALRN 428
EK+G+Q+L+ G N KR + I+ NK+T S +R+ + NNK AL
Sbjct: 559 EKIGAQLLQKG---NLKR-----RVTIIPLNKITSFVASAERVGAAKKISNNKAQLALEL 610
Query: 429 SGAEN 433
G ++
Sbjct: 611 IGYDD 615
Score = 38 (18.4 bits), Expect = 3.9e-09, Sum P(3) = 3.9e-09
Identities = 19/82 (23%), Positives = 40/82 (48%)
Query: 369 KIEKLGSQILELGVQANQ-KRLQKSEKE-KILNQNKLTLRQCSDRLKDMEDKNNKLLHAL 426
+I+KL S L+L V ++ ++L+ K+ K N N L Q +++ K ++L +
Sbjct: 678 QIQKLNSLQLKLQVVTSEYEKLETQLKDLKTQNANFHRLEQ------EIQLKQHELTLLI 731
Query: 427 RNSGAENIFEAYCWLQQHRHEL 448
++ F QQ++ ++
Sbjct: 732 EQRETDSSFRLLSDYQQYKDDV 753
>CGD|CAL0004031 [details] [associations]
symbol:SMC3 species:5476 "Candida albicans" [GO:0034990
"nuclear mitotic cohesin complex" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0051177 "meiotic sister chromatid
cohesion" evidence=IEA] [GO:0007130 "synaptonemal complex assembly"
evidence=IEA] [GO:0030437 "ascospore formation" evidence=IEA]
[GO:0007131 "reciprocal meiotic recombination" evidence=IEA]
[GO:0007064 "mitotic sister chromatid cohesion" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
InterPro:IPR010935 Pfam:PF06470 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005694 GO:GO:0051276
EMBL:AACQ01000026 SUPFAM:SSF75553 KO:K06669 RefSeq:XP_720093.1
ProteinModelPortal:Q5AEZ0 STRING:Q5AEZ0 GeneID:3638190
KEGG:cal:CaO19.7895 CGD:CAL0062457 Uniprot:Q5AEZ0
Length = 1240
Score = 133 (51.9 bits), Expect = 1.8e-09, Sum P(3) = 1.8e-09
Identities = 76/362 (20%), Positives = 147/362 (40%)
Query: 646 EQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKL 705
E +I + KL K R+E Q + + ++E + K LE E + ++ + +L
Sbjct: 823 ESEVINNLQPKLNKYRQEQQKQHQQQLQLQQESSRSSDT-KSNLEYEELQQELESLHIQL 881
Query: 706 VDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLA 765
D + N Q + +I EI +C+ A+ + I+ I+ +E KQ L
Sbjct: 882 -DTSQSRNSQVVENLTKINE---EINNCEQELAQANKQQIKI---IKNIEKFSKQTNNLL 934
Query: 766 LQASLHYE---DCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQ 822
Q S+ + D +++ +A + + + + +L + + + + +
Sbjct: 935 NQKSIKSQMRDDANQKIRELGVLPEEAFQSEKYDQYSSDQLLSKLNGINQELTKYSHINK 994
Query: 823 DNISQANSIFFLNQNILQ---EYEHRQRQIEDLST-----KQEADKKELKRFLAEIDALK 874
I Q N ++++ + + + IE+L T K +A KK + +
Sbjct: 995 KAIEQFNLFNRQKEDLMARRIDLNNSKASIENLITNLQQQKNDAIKKSFNQVAKSFKQIF 1054
Query: 875 EKWLPT-LRNLVAQINETFSRNFQEMA-VAGEVSLDEHESDFDKF-GILIKVKFRQSGQL 931
EK +P NL+ Q + N V + D+ + D D + G+ I V F
Sbjct: 1055 EKLVPRGTGNLIMQKKNDNNNNVNVTDDVNSDNDDDDDDDDIDNYSGVAISVSFNSKND- 1113
Query: 932 EVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQ 991
E SGG++S+ I + ++Q+ PF + DEI+ +D R +L+ S+
Sbjct: 1114 EQQRIEQLSGGQKSLCAIALIFAIQNCDPAPFYLFDEIDSNLDT-QYRISVARLIHELSR 1172
Query: 992 PN 993
N
Sbjct: 1173 NN 1174
Score = 113 (44.8 bits), Expect = 2.2e-07, Sum P(3) = 2.2e-07
Identities = 52/236 (22%), Positives = 109/236 (46%)
Query: 665 INIVQIEKRKRREMENHINLRKRKLESIEKE-DDINTALAKLVDQAADLNIQQFKYAIEI 723
I+ ++I+ RK++E+E R+L + KE + N+ L KL ++ LN++ ++
Sbjct: 671 IDALKIQTRKKQELEK----TDRELIKVTKEIESTNSQLNKLNNEL-QLNVR------DL 719
Query: 724 KNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLK--QHEKLALQASLHYEDCKKEVEH 781
L V K ++ D +I L+ NL+ Q+ K +++ +L + + E
Sbjct: 720 DRLSVSKEPIKIELSQLTNKKFNLDQEISSLKSNLQNLQNTKNSIKVNLKQHESELNSEF 779
Query: 782 CRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQE 841
+ D + + + ++ ELE + + T EL+ I S+ + N ++
Sbjct: 780 TQVLTQDEQNELDELSKSAIELESKLDHIVTRSSELDTKISGIESEVINNLQPKLNKYRQ 839
Query: 842 YEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQ 897
+ +Q Q + L +QE+ + + E + L+++ L +L Q++ + SRN Q
Sbjct: 840 EQQKQHQ-QQLQLQQESSRSSDTKSNLEYEELQQE----LESLHIQLDTSQSRNSQ 890
Score = 98 (39.6 bits), Expect = 1.8e-09, Sum P(3) = 1.8e-09
Identities = 49/225 (21%), Positives = 96/225 (42%)
Query: 22 NIIEIELHNFMTFDHL--ICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATS 79
+I +I + F T+ + I N+V+G NGSGKS+ AI L + R
Sbjct: 2 HIKKIIIQGFKTYKNTTTIDLLSPHCNVVVGRNGSGKSNFFAAIRFVLSDAYTHMSREER 61
Query: 80 IGAYVKRGEE---SGYIKISL-----RGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGE 131
G + G S Y++I R + ++I R I + K ++ +GK + +
Sbjct: 62 QGL-IHEGSGTVMSAYVEIIFDNTDGRFPINKPEISIRRTIGLK-KDDYSLDGKSATRSD 119
Query: 132 VLEITKRFNIQVNNLTQFLPQDRVCEFAKLSP---VKLLEETEKA-VGDPQLPVQHCALV 187
++ + + +N +PQ R+ + LL+E A V + +L +
Sbjct: 120 IMNLLESAGFSRSNPYYIVPQGRITSLTNSKNHERLNLLKEVSGANVFENKLKESMKEMN 179
Query: 188 EKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLE 232
+ + K I+ T+ + L L+ + + KD +++ + ++LE
Sbjct: 180 QSNLKRARIDETLVSIEERLKDLQIESADL-KDFQKLDKLKKILE 223
Score = 92 (37.4 bits), Expect = 5.7e-05, Sum P(2) = 5.7e-05
Identities = 50/260 (19%), Positives = 123/260 (47%)
Query: 650 IEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKL-ESIEK-EDDINTALAKLVD 707
IE+ LQ E ++ + +++K K+ N + +L ES+E+ E+ + L +
Sbjct: 195 IEERLKDLQIESADLKDFQKLDKLKKILEFNIFDREYNELNESLEELEEKHQSILQESKQ 254
Query: 708 QAADLNIQQFKYAIEIKNLLVEI-VSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLAL 766
+L ++ K +E+++ + E+ +S K EK + ++ D ++ + ++ KL
Sbjct: 255 DLIELEKRE-KLCVELQDSINELKISAKVLKLEKEQSDLDCDQLLKVIA---EKEIKLR- 309
Query: 767 QASLHYEDCKKEVEHCRKHL----SDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQ 822
+ SL+ E K++ H + + S+ + + I+ PEL K +++ E++++
Sbjct: 310 ELSLNNELSKEQNIHINEQIGILQSEINQHKQEISRYKPELNK--------LQQQESSLK 361
Query: 823 DNISQANS---IFFLNQNILQEYEHRQRQIEDLST------KQEADKKELKRFLAEIDAL 873
+S+ +S + Q+ ++ +++ + L+T +Q DK + R ++
Sbjct: 362 QQLSEISSKQRALYAKQSRFSKFVNKKDRDSWLNTEISKLKRQITDKDQEMRHISNEVKT 421
Query: 874 KEKWLPTLRNLVAQINETFS 893
+E L L + ++N++ +
Sbjct: 422 RESSLEALSESIKKLNDSLN 441
Score = 53 (23.7 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 46/242 (19%), Positives = 94/242 (38%)
Query: 75 GRATSIGAYVKRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLE 134
G T + AYV E + R + ++I R I + K ++ +GK + +++
Sbjct: 68 GSGTVMSAYV----EIIFDNTDGRFPINKPEISIRRTIGLK-KDDYSLDGKSATRSDIMN 122
Query: 135 ITKRFNIQVNNLTQFLPQDRVCEFAKLSP---VKLLEETEKA-VGDPQLPVQHCALVEKS 190
+ + +N +PQ R+ + LL+E A V + +L + + +
Sbjct: 123 LLESAGFSRSNPYYIVPQGRITSLTNSKNHERLNLLKEVSGANVFENKLKESMKEMNQSN 182
Query: 191 SKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLE------KVESMKKKLPWL 244
K I+ T+ + L L+ + + KD +++ + ++LE + + + L L
Sbjct: 183 LKRARIDETLVSIEERLKDLQIESADL-KDFQKLDKLKKILEFNIFDREYNELNESLEEL 241
Query: 245 --KYDMKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLI 302
K+ E ++++E + K EK D DC +L +I
Sbjct: 242 EEKHQSILQESKQDLIELEKREKLCVELQDSINELKISAKVLKLEKEQSDLDCDQLLKVI 301
Query: 303 NE 304
E
Sbjct: 302 AE 303
Score = 50 (22.7 bits), Expect = 1.8e-09, Sum P(3) = 1.8e-09
Identities = 20/86 (23%), Positives = 39/86 (45%)
Query: 372 KLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGA 431
+L I EL + A +L+K + + +Q + + +L+++ NN+L
Sbjct: 268 ELQDSINELKISAKVLKLEKEQSDLDCDQLLKVIAEKEIKLRELS-LNNELSKEQNIHIN 326
Query: 432 ENIFEAYCWLQQHRHELNKEAYGPVL 457
E I + QH+ E+++ Y P L
Sbjct: 327 EQIGILQSEINQHKQEISR--YKPEL 350
Score = 46 (21.3 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 14/60 (23%), Positives = 34/60 (56%)
Query: 368 DKIEKLGSQILELGVQ-ANQKRLQKSEK-EKILNQNKLT--LRQCSDRLKDMEDKNNKLL 423
+ + + ++ +L ++ A+ K QK +K +KIL N + ++ L+++E+K+ +L
Sbjct: 190 ETLVSIEERLKDLQIESADLKDFQKLDKLKKILEFNIFDREYNELNESLEELEEKHQSIL 249
Score = 45 (20.9 bits), Expect = 0.00078, Sum P(2) = 0.00078
Identities = 17/69 (24%), Positives = 31/69 (44%)
Query: 186 LVEKSSKLKTIECTVKRNGDTLNQL----KALNVEQEKDVERVRQRAELLEKVESMKKKL 241
+ +K +++ I VK +L L K LN + D E ++ A L + K+++
Sbjct: 405 ITDKDQEMRHISNEVKTRESSLEALSESIKKLN-DSLNDEEHIKTLANLKTTINDSKQQI 463
Query: 242 PWLKYDMKK 250
L D +K
Sbjct: 464 TQL-VDQRK 471
>WB|WBGene00003367 [details] [associations]
symbol:mix-1 species:6239 "Caenorhabditis elegans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005694 "chromosome"
evidence=IEA] [GO:0051276 "chromosome organization" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040039
"inductive cell migration" evidence=IMP] [GO:0042464 "dosage
compensation by hypoactivation of X chromosome" evidence=IMP]
[GO:0000070 "mitotic sister chromatid segregation" evidence=IMP]
[GO:0007076 "mitotic chromosome condensation" evidence=IMP]
[GO:0000793 "condensed chromosome" evidence=IDA] [GO:0000775
"chromosome, centromeric region" evidence=IDA] [GO:0046536 "dosage
compensation complex" evidence=IPI] InterPro:IPR010935
InterPro:IPR027120 Pfam:PF06470 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0009792 GO:GO:0000775
GO:GO:0051301 GO:GO:0002119 GO:GO:0040039 GO:GO:0000793
GO:GO:0007076 EMBL:Z46935 GO:GO:0042464 eggNOG:COG1196
GO:GO:0046536 SUPFAM:SSF75553 EMBL:U96387 PIR:T23744 PIR:T23981
RefSeq:NP_496331.1 UniGene:Cel.8608 ProteinModelPortal:Q09591
SMR:Q09591 IntAct:Q09591 STRING:Q09591 PaxDb:Q09591
EnsemblMetazoa:M106.1 GeneID:174669 KEGG:cel:CELE_M106.1
UCSC:M106.1 CTD:174669 WormBase:M106.1 GeneTree:ENSGT00550000074857
HOGENOM:HOG000016791 InParanoid:Q09591 KO:K06674 OMA:KSYQKHT
NextBio:884988 PANTHER:PTHR18937:SF9 Uniprot:Q09591
Length = 1244
Score = 124 (48.7 bits), Expect = 2.0e-09, Sum P(3) = 2.0e-09
Identities = 70/337 (20%), Positives = 139/337 (41%)
Query: 643 MQTEQRLIEDEAAKLQKEREEIINI-VQIEKRKRREMENHINLRKRKLESIEKEDDINTA 701
+Q ++ + + +K R E++ + +E+ ++ ++ ++K E E E+ + A
Sbjct: 813 LQKAEQTVAQNKNRGEKARREVMLLQATVEEMEKTIKKDEGIWEQKKKECDELEEKLPNA 872
Query: 702 LAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRE-LEFNLKQ 760
+A L D + Q K ++KN +I S + K E DA IRE + K+
Sbjct: 873 IAALKDAELEQKAAQAKLN-DLKNNQRQI-STRLGKIAK-----ECDALIREKAKTKSKR 925
Query: 761 HEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPE---LEKEFLEMPTTIEEL 817
EK SL + E R L + ++ A + + E + +E+
Sbjct: 926 EEKEKELTSLQQSEASNRKE-ARSKLKKFEWLSDEEAHFNKKGGLYDFEGYTVSKGKDEI 984
Query: 818 EAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKW 877
+ + D I + QN+ + + ++ D+ K+E ++ I L +K
Sbjct: 985 KE-LTDKIETLERSCCI-QNV-SNLDTCEAKVLDIKNKRERITEDFNMLKKTIATLDKKK 1041
Query: 878 LPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVLSAH 937
+ L +N+ F + F + SL E G+ +KV F G + S H
Sbjct: 1042 VDELIRAHESVNKDFGQIFNCLLPDAHASLVPPEGKTVCEGLEVKVSF---GGVVKDSLH 1098
Query: 938 HQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMD 974
SGG+RS+ + ++++ P ++DE++ +D
Sbjct: 1099 ELSGGQRSLVALSLILAMLKFKPAPLYILDEVDAALD 1135
Score = 106 (42.4 bits), Expect = 2.0e-09, Sum P(3) = 2.0e-09
Identities = 56/259 (21%), Positives = 106/259 (40%)
Query: 22 NIIEIELHNFMTFD-HL-ICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATS 79
+I I L F ++ H I N + G NGSGKS+++ +I +G + RA S
Sbjct: 2 HIKSIHLDGFKSYQKHTDILDFSPTFNAITGYNGSGKSNILDSICFIMGINKLDNIRAKS 61
Query: 80 IGAYVKRGEESGYIKISLRGDTKE------EHLT--IMRKIDTRNKS------EWFFNGK 125
+ + G +++ K EHL ++++I T + + NG
Sbjct: 62 MHELISHGGTKAIVQVRFDNTDKRCSPFGMEHLDEIVVQRIITAQATGKGCATSYTLNGH 121
Query: 126 VVPKGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVG----DPQLPV 181
G++ + + + VNN + Q R+ + P ++L E+A G D +
Sbjct: 122 AATNGKMQDFFRGVGLNVNNPHFLIMQGRITTVLNMKPEEILGMVEEAAGTKMYDQKKKD 181
Query: 182 QHCALVEKSSKLKTIECT---------VKRNGDTLNQLKALNVEQEKD-VERVRQRAELL 231
+ K +KLK ++ VK D N ++ +++ K+ R + +
Sbjct: 182 AEKTMFLKDAKLKEVDRIFQSSIDPRMVKFREDRKNMVEVTRLKKLKENFSRKYEAFQYF 241
Query: 232 EKVESMKKKLPWLKYDMKK 250
+ E++KK ++ D KK
Sbjct: 242 QTCEAVKKSAKEIE-DAKK 259
Score = 84 (34.6 bits), Expect = 0.00085, Sum P(4) = 0.00085
Identities = 83/388 (21%), Positives = 160/388 (41%)
Query: 643 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTAL 702
M + IE + +L E+ + + +K R++ N + RKL ++ +IN +
Sbjct: 696 MYARRPQIEAQQRELDALNREL-QLTEASSQKCRDLNNQLATAMRKLAQVKT--NINNSE 752
Query: 703 AKLVDQAADLNIQQF-KYAIEIKNLLVEI--VSCKWSYAE--KHMASIEFDAKIRELEFN 757
+V + ++ +++ K EI+ + + V K E K+ + + +EL
Sbjct: 753 FGIVVRDLKVHSEEYEKNQAEIEATVKTLKDVEDKIKTLESMKNKDKNSQEKRKKELTAL 812
Query: 758 LKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEEL 817
L++ E+ Q E ++EV + + + ++ + I + +KE E+ +
Sbjct: 813 LQKAEQTVAQNKNRGEKARREVMLLQATVEEMEKTIKKDEGIWEQKKKECDELEEKLPNA 872
Query: 818 EAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKW 877
AA++D + + Q L + ++ QRQI ST+ KE + E K K
Sbjct: 873 IAALKDAELEQKAA----QAKLNDLKNNQRQI---STRLGKIAKECDALIREKAKTKSKR 925
Query: 878 LPTLRNLVA-QINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVK-FRQS-GQLEVL 934
+ L + Q +E +R + L + E+ F+K G L + + S G+ E+
Sbjct: 926 EEKEKELTSLQQSEASNRKEARSKLKKFEWLSDEEAHFNKKGGLYDFEGYTVSKGKDEIK 985
Query: 935 SAHHQSGG-ERS--VSTILYLVSLQ----DLTNCPFRVVDEINQGMDPIN--ERKMFQQL 985
+ ERS + + L + + D+ N R+ ++ N I ++K +L
Sbjct: 986 ELTDKIETLERSCCIQNVSNLDTCEAKVLDIKNKRERITEDFNMLKKTIATLDKKKVDEL 1045
Query: 986 VRAASQPNTP--QCFLLTPKLLPDLEYS 1011
+RA N Q F LLPD S
Sbjct: 1046 IRAHESVNKDFGQIFNC---LLPDAHAS 1070
Score = 55 (24.4 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 25/81 (30%), Positives = 38/81 (46%)
Query: 160 KLSPVKL-LEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQE 218
KL+ VK + +E + L V H EK+ IE TVK D +++K L +
Sbjct: 740 KLAQVKTNINNSEFGIVVRDLKV-HSEEYEKNQA--EIEATVKTLKDVEDKIKTLESMKN 796
Query: 219 KDV----ERVRQRAELLEKVE 235
KD +R ++ LL+K E
Sbjct: 797 KDKNSQEKRKKELTALLQKAE 817
Score = 51 (23.0 bits), Expect = 2.0e-09, Sum P(3) = 2.0e-09
Identities = 14/48 (29%), Positives = 23/48 (47%)
Query: 379 ELGVQANQKRLQKSEKEKILNQNKL-----TLRQCSDRLKDMEDKNNK 421
E G+ ++ E EK NQ ++ TL+ D++K +E NK
Sbjct: 752 EFGIVVRDLKVHSEEYEK--NQAEIEATVKTLKDVEDKIKTLESMKNK 797
Score = 40 (19.1 bits), Expect = 9.9e-08, Sum P(4) = 9.9e-08
Identities = 13/38 (34%), Positives = 17/38 (44%)
Query: 358 QTVPAYEPPHDKIEKLGSQILELGVQANQKRLQKSEKE 395
QT A + +IE I +LG + NQ L KE
Sbjct: 242 QTCEAVKKSAKEIEDAKKGIEDLGEKFNQLDLDLKNKE 279
Score = 38 (18.4 bits), Expect = 9.9e-08, Sum P(4) = 9.9e-08
Identities = 15/63 (23%), Positives = 31/63 (49%)
Query: 510 SNESSRKEPFQISEEMRALGISARLDQVFDAPHAVK--EVLISQFGLDSSYIGSKETDQK 567
S ++ +KE +I+++++ LG + D HA K E + +D+ + S + +
Sbjct: 449 SADNYQKEVDEINKQLQLLGFNIDADTE-KREHAAKLHESITKLKDMDTRLLNSYKDGRY 507
Query: 568 ADN 570
A N
Sbjct: 508 ALN 510
>UNIPROTKB|Q09591 [details] [associations]
symbol:mix-1 "Mitotic chromosome and
X-chromosome-associated protein mix-1" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR010935 InterPro:IPR027120 Pfam:PF06470 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0009792
GO:GO:0000775 GO:GO:0051301 GO:GO:0002119 GO:GO:0040039
GO:GO:0000793 GO:GO:0007076 EMBL:Z46935 GO:GO:0042464
eggNOG:COG1196 GO:GO:0046536 SUPFAM:SSF75553 EMBL:U96387 PIR:T23744
PIR:T23981 RefSeq:NP_496331.1 UniGene:Cel.8608
ProteinModelPortal:Q09591 SMR:Q09591 IntAct:Q09591 STRING:Q09591
PaxDb:Q09591 EnsemblMetazoa:M106.1 GeneID:174669
KEGG:cel:CELE_M106.1 UCSC:M106.1 CTD:174669 WormBase:M106.1
GeneTree:ENSGT00550000074857 HOGENOM:HOG000016791 InParanoid:Q09591
KO:K06674 OMA:KSYQKHT NextBio:884988 PANTHER:PTHR18937:SF9
Uniprot:Q09591
Length = 1244
Score = 124 (48.7 bits), Expect = 2.0e-09, Sum P(3) = 2.0e-09
Identities = 70/337 (20%), Positives = 139/337 (41%)
Query: 643 MQTEQRLIEDEAAKLQKEREEIINI-VQIEKRKRREMENHINLRKRKLESIEKEDDINTA 701
+Q ++ + + +K R E++ + +E+ ++ ++ ++K E E E+ + A
Sbjct: 813 LQKAEQTVAQNKNRGEKARREVMLLQATVEEMEKTIKKDEGIWEQKKKECDELEEKLPNA 872
Query: 702 LAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRE-LEFNLKQ 760
+A L D + Q K ++KN +I S + K E DA IRE + K+
Sbjct: 873 IAALKDAELEQKAAQAKLN-DLKNNQRQI-STRLGKIAK-----ECDALIREKAKTKSKR 925
Query: 761 HEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPE---LEKEFLEMPTTIEEL 817
EK SL + E R L + ++ A + + E + +E+
Sbjct: 926 EEKEKELTSLQQSEASNRKE-ARSKLKKFEWLSDEEAHFNKKGGLYDFEGYTVSKGKDEI 984
Query: 818 EAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKW 877
+ + D I + QN+ + + ++ D+ K+E ++ I L +K
Sbjct: 985 KE-LTDKIETLERSCCI-QNV-SNLDTCEAKVLDIKNKRERITEDFNMLKKTIATLDKKK 1041
Query: 878 LPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVLSAH 937
+ L +N+ F + F + SL E G+ +KV F G + S H
Sbjct: 1042 VDELIRAHESVNKDFGQIFNCLLPDAHASLVPPEGKTVCEGLEVKVSF---GGVVKDSLH 1098
Query: 938 HQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMD 974
SGG+RS+ + ++++ P ++DE++ +D
Sbjct: 1099 ELSGGQRSLVALSLILAMLKFKPAPLYILDEVDAALD 1135
Score = 106 (42.4 bits), Expect = 2.0e-09, Sum P(3) = 2.0e-09
Identities = 56/259 (21%), Positives = 106/259 (40%)
Query: 22 NIIEIELHNFMTFD-HL-ICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATS 79
+I I L F ++ H I N + G NGSGKS+++ +I +G + RA S
Sbjct: 2 HIKSIHLDGFKSYQKHTDILDFSPTFNAITGYNGSGKSNILDSICFIMGINKLDNIRAKS 61
Query: 80 IGAYVKRGEESGYIKISLRGDTKE------EHLT--IMRKIDTRNKS------EWFFNGK 125
+ + G +++ K EHL ++++I T + + NG
Sbjct: 62 MHELISHGGTKAIVQVRFDNTDKRCSPFGMEHLDEIVVQRIITAQATGKGCATSYTLNGH 121
Query: 126 VVPKGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVG----DPQLPV 181
G++ + + + VNN + Q R+ + P ++L E+A G D +
Sbjct: 122 AATNGKMQDFFRGVGLNVNNPHFLIMQGRITTVLNMKPEEILGMVEEAAGTKMYDQKKKD 181
Query: 182 QHCALVEKSSKLKTIECT---------VKRNGDTLNQLKALNVEQEKD-VERVRQRAELL 231
+ K +KLK ++ VK D N ++ +++ K+ R + +
Sbjct: 182 AEKTMFLKDAKLKEVDRIFQSSIDPRMVKFREDRKNMVEVTRLKKLKENFSRKYEAFQYF 241
Query: 232 EKVESMKKKLPWLKYDMKK 250
+ E++KK ++ D KK
Sbjct: 242 QTCEAVKKSAKEIE-DAKK 259
Score = 84 (34.6 bits), Expect = 0.00085, Sum P(4) = 0.00085
Identities = 83/388 (21%), Positives = 160/388 (41%)
Query: 643 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTAL 702
M + IE + +L E+ + + +K R++ N + RKL ++ +IN +
Sbjct: 696 MYARRPQIEAQQRELDALNREL-QLTEASSQKCRDLNNQLATAMRKLAQVKT--NINNSE 752
Query: 703 AKLVDQAADLNIQQF-KYAIEIKNLLVEI--VSCKWSYAE--KHMASIEFDAKIRELEFN 757
+V + ++ +++ K EI+ + + V K E K+ + + +EL
Sbjct: 753 FGIVVRDLKVHSEEYEKNQAEIEATVKTLKDVEDKIKTLESMKNKDKNSQEKRKKELTAL 812
Query: 758 LKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEEL 817
L++ E+ Q E ++EV + + + ++ + I + +KE E+ +
Sbjct: 813 LQKAEQTVAQNKNRGEKARREVMLLQATVEEMEKTIKKDEGIWEQKKKECDELEEKLPNA 872
Query: 818 EAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKW 877
AA++D + + Q L + ++ QRQI ST+ KE + E K K
Sbjct: 873 IAALKDAELEQKAA----QAKLNDLKNNQRQI---STRLGKIAKECDALIREKAKTKSKR 925
Query: 878 LPTLRNLVA-QINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVK-FRQS-GQLEVL 934
+ L + Q +E +R + L + E+ F+K G L + + S G+ E+
Sbjct: 926 EEKEKELTSLQQSEASNRKEARSKLKKFEWLSDEEAHFNKKGGLYDFEGYTVSKGKDEIK 985
Query: 935 SAHHQSGG-ERS--VSTILYLVSLQ----DLTNCPFRVVDEINQGMDPIN--ERKMFQQL 985
+ ERS + + L + + D+ N R+ ++ N I ++K +L
Sbjct: 986 ELTDKIETLERSCCIQNVSNLDTCEAKVLDIKNKRERITEDFNMLKKTIATLDKKKVDEL 1045
Query: 986 VRAASQPNTP--QCFLLTPKLLPDLEYS 1011
+RA N Q F LLPD S
Sbjct: 1046 IRAHESVNKDFGQIFNC---LLPDAHAS 1070
Score = 55 (24.4 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 25/81 (30%), Positives = 38/81 (46%)
Query: 160 KLSPVKL-LEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQE 218
KL+ VK + +E + L V H EK+ IE TVK D +++K L +
Sbjct: 740 KLAQVKTNINNSEFGIVVRDLKV-HSEEYEKNQA--EIEATVKTLKDVEDKIKTLESMKN 796
Query: 219 KDV----ERVRQRAELLEKVE 235
KD +R ++ LL+K E
Sbjct: 797 KDKNSQEKRKKELTALLQKAE 817
Score = 51 (23.0 bits), Expect = 2.0e-09, Sum P(3) = 2.0e-09
Identities = 14/48 (29%), Positives = 23/48 (47%)
Query: 379 ELGVQANQKRLQKSEKEKILNQNKL-----TLRQCSDRLKDMEDKNNK 421
E G+ ++ E EK NQ ++ TL+ D++K +E NK
Sbjct: 752 EFGIVVRDLKVHSEEYEK--NQAEIEATVKTLKDVEDKIKTLESMKNK 797
Score = 40 (19.1 bits), Expect = 9.9e-08, Sum P(4) = 9.9e-08
Identities = 13/38 (34%), Positives = 17/38 (44%)
Query: 358 QTVPAYEPPHDKIEKLGSQILELGVQANQKRLQKSEKE 395
QT A + +IE I +LG + NQ L KE
Sbjct: 242 QTCEAVKKSAKEIEDAKKGIEDLGEKFNQLDLDLKNKE 279
Score = 38 (18.4 bits), Expect = 9.9e-08, Sum P(4) = 9.9e-08
Identities = 15/63 (23%), Positives = 31/63 (49%)
Query: 510 SNESSRKEPFQISEEMRALGISARLDQVFDAPHAVK--EVLISQFGLDSSYIGSKETDQK 567
S ++ +KE +I+++++ LG + D HA K E + +D+ + S + +
Sbjct: 449 SADNYQKEVDEINKQLQLLGFNIDADTE-KREHAAKLHESITKLKDMDTRLLNSYKDGRY 507
Query: 568 ADN 570
A N
Sbjct: 508 ALN 510
>UNIPROTKB|I3LMC6 [details] [associations]
symbol:LOC100523938 "Structural maintenance of chromosomes
protein" species:9823 "Sus scrofa" [GO:0005634 "nucleus"
evidence=IEA] [GO:0030261 "chromosome condensation" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0005694
GO:GO:0006281 GO:GO:0006310 GO:GO:0030261 GO:GO:0007062
SUPFAM:SSF75553 OMA:NALVCET GeneTree:ENSGT00580000081569
EMBL:CU695116 EMBL:CU914655 Ensembl:ENSSSCT00000028659
Uniprot:I3LMC6
Length = 1235
Score = 122 (48.0 bits), Expect = 3.1e-09, Sum P(3) = 3.1e-09
Identities = 62/222 (27%), Positives = 100/222 (45%)
Query: 26 IELHNFMTFD-HLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI---- 80
IE+ NF ++ I P R +IGPNGSGKS+L+ AI+ LG T L R ++
Sbjct: 7 IEIENFKSYKGRQIIGPFQRFTAIIGPNGSGKSNLMDAISFVLGEKTSNL-RVKTLRDLI 65
Query: 81 -GAYV-KRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKR 138
GA V K ++ + + E+ T R I SE+ N KVV E E ++
Sbjct: 66 HGAPVGKPAANRAFVSMVYSEEGAEDR-TFARVI-VGGSSEYKINNKVVQLHEYSEELEK 123
Query: 139 FNIQVNNLTQFLPQDRVCEFAKLSPVK---LLEETEKAVGDPQLPVQHCALVEKSSKLKT 195
I + + Q V A +P + L EE ++ G+ L ++ K K
Sbjct: 124 LGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRS-GE---------LAQEYDKRKK 173
Query: 196 IECTVKRNGDT-LNQLKALNVEQE-KDVERVRQRAELLEKVE 235
E VK DT N + N+ E K+ ++ ++ A+ ++++
Sbjct: 174 -EM-VKAEEDTQFNYHRKKNIAAERKEAKQEKEEADRYQRLK 213
Score = 114 (45.2 bits), Expect = 3.1e-09, Sum P(3) = 3.1e-09
Identities = 77/391 (19%), Positives = 170/391 (43%)
Query: 651 EDEAAKLQKEREEIINIV-----QIEKRKRREM--ENHINLRKRKLESIEKE-DDINTAL 702
E+E KL+KE + + I+ Q++ K + + ++ +N + ++E I K+ N +
Sbjct: 846 ENEIEKLKKEEQRHMKIIDETMAQLQDLKNQHLAKKSEVNDKNHEMEEIRKKLGGANKEM 905
Query: 703 AKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHE 762
L + + + + + NLL +CK + ++ D I + E + + +
Sbjct: 906 THLQKEVTAIETKLEQKRSDRHNLLQ---ACKMQDIKLPLSKGTMD-DISQEEGSSQGED 961
Query: 763 KLA---LQASLHYEDCKKEVEH---CRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEE 816
++ ++++ + E+++ C + L QAE E+++E + + E
Sbjct: 962 SVSGSQRTSNIYAREALIEIDYGDLC-EDLKKPDAQAEE------EIKQEMNTLQQKLNE 1014
Query: 817 LEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALK-- 874
++ +Q I N +++ E + + ++ S + EA +K K+ + +K
Sbjct: 1015 QQSVLQ-------RIAAPNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKE 1067
Query: 875 --EKWLPTLRNLVAQINETF---SRNFQEMAVAGEVSLDEHESDFDKFGILIKVK-FRQS 928
+++ ++ I+E + SRN A G + +E D + + K FR
Sbjct: 1068 RFDRFNACFESVATNIDEIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPM 1127
Query: 929 GQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRA 988
L SGGE++V+ + L ++ PF V+DEI+ +D N K+ ++
Sbjct: 1128 DNL--------SGGEKTVAALALLFAIHSYKPAPFFVLDEIDAALDNTNIGKV-ANYIKE 1178
Query: 989 ASQPNTPQCFLLTPKLLPDLEYSEACSILNI 1019
S N Q +++ L + Y++A S++ +
Sbjct: 1179 QSTCNF-QAIVIS---LKEEFYTKAESLIGV 1205
Score = 98 (39.6 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 57/271 (21%), Positives = 118/271 (43%)
Query: 654 AAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKE-DDINTALAKLVDQAADL 712
AA+ ++ ++E + ++ K + + L+ KL E E + +N LA +
Sbjct: 193 AAERKEAKQEKEEADRYQRLKDEVVRAQVQLQLFKLYHNEVEIEKLNKELASKNKEIEKD 252
Query: 713 NIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHY 772
+ K E+K E+ + IE + K ++ E N K+ + + + + +
Sbjct: 253 KKRMDKVEDELKEKKKELGKMM-----REQQQIEKEIKEKDSELNQKRPQYIKAKENTSH 307
Query: 773 EDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIF 832
+ K++E +K L +A++ + ELEKE L + +E E +++
Sbjct: 308 KI--KKLEAAKKSLQNAQKHYKKRKGDMDELEKEMLSVEKARQEFEERMEEESQSQGRDL 365
Query: 833 FLNQNILQEYEHRQRQIEDLSTKQEADKKELKRF----LAEIDAL---KEKWLPT---LR 882
L +N +++Y HR + E+ S + +EL++F A+ D L + K + T ++
Sbjct: 366 TLEENQVKKY-HRLK--EEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAKIK 422
Query: 883 NLVAQINETFSR--NFQEMAVAGEVSLDEHE 911
+ +I E R +E + SL+E +
Sbjct: 423 QKLREIEENQKRIEKLEEYITTSKQSLEEQK 453
Score = 90 (36.7 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 52/272 (19%), Positives = 123/272 (45%)
Query: 651 EDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAA 710
E E KL KE ++ +K++ ++E+ + +K++L + +E ++ ++ +
Sbjct: 232 EVEIEKLNKELASKNKEIEKDKKRMDKVEDELKEKKKELGKMMREQQ--QIEKEIKEKDS 289
Query: 711 DLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQ-AS 769
+LN ++ +Y +N +I K A+K + + + K R+ + + + E L+++ A
Sbjct: 290 ELNQKRPQYIKAKENTSHKIK--KLEAAKKSLQNAQKHYKKRKGDMDELEKEMLSVEKAR 347
Query: 770 LHYEDCKKEVEHCR-KHLSDAKRQAESIAFITPELEKEFLEMPTTIEEL---EAAIQDNI 825
+E+ +E + + L+ + Q + + E K + +E+ + A QD +
Sbjct: 348 QEFEERMEEESQSQGRDLTLEENQVKKYHRLKEEASKRAATLAQELEKFNRDQKADQDRL 407
Query: 826 S-----QANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPT 880
+ + + Q L+E E Q++IE L K+ L+ L E+ +
Sbjct: 408 DLEERKKVETEAKIKQK-LREIEENQKRIEKLEEYITTSKQSLEEQKKLEGELTEE-VEM 465
Query: 881 LRNLVAQINETFSRNFQEMAVAGEVSLDEHES 912
+ + +IN+ ++ +++ G+ +D ES
Sbjct: 466 AKRRIDEINKELNQVMEQL---GDARIDRQES 494
Score = 86 (35.3 bits), Expect = 7.2e-07, Sum P(2) = 7.2e-07
Identities = 55/261 (21%), Positives = 118/261 (45%)
Query: 650 IEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQA 709
+EDE + +KE +++ Q +++ +E ++ +N +KR + I+ +++ + + KL
Sbjct: 259 VEDELKEKKKELGKMMREQQQIEKEIKEKDSELN-QKRP-QYIKAKENTSHKIKKLEAAK 316
Query: 710 ADLNIQQFKYAI------EIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFN-LKQHE 762
L Q Y E++ ++ + + + E+ + + LE N +K++
Sbjct: 317 KSLQNAQKHYKKRKGDMDELEKEMLSVEKARQEFEERMEEESQSQGRDLTLEENQVKKYH 376
Query: 763 KLALQASLHYEDCKKEVEHC-RKHLSDAKR-------QAESIAFITPELEKEFLEMPTTI 814
+L +AS +E+E R +D R + E+ A I +L +E E I
Sbjct: 377 RLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAKIKQKL-REIEENQKRI 435
Query: 815 EELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEI-DAL 873
E+LE I + L + +E E +R+I++++ KEL + + ++ DA
Sbjct: 436 EKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEIN-------KELNQVMEQLGDAR 488
Query: 874 KEKWLPTLRNLVAQINETFSR 894
++ + + A+I E+ R
Sbjct: 489 IDRQESSRQQRKAEIMESIKR 509
Score = 73 (30.8 bits), Expect = 0.00025, Sum P(3) = 0.00025
Identities = 33/138 (23%), Positives = 61/138 (44%)
Query: 188 EKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYD 247
E +SK K IE KR ++LK E++K++ ++ + + +EK +K+K L +
Sbjct: 241 ELASKNKEIEKDKKRMDKVEDELK----EKKKELGKMMREQQQIEK--EIKEKDSEL--N 292
Query: 248 MKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENSK 307
K+ +YI +L K + +K GD +L + K
Sbjct: 293 QKRPQYIKAKENTSHKIKKLEAAKKSLQNAQKHYKKRK-------GDMDELEKEMLSVEK 345
Query: 308 RRMDFLEKVDQGVQVQGK 325
R +F E++++ Q QG+
Sbjct: 346 ARQEFEERMEEESQSQGR 363
Score = 70 (29.7 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 67/318 (21%), Positives = 129/318 (40%)
Query: 648 RLIEDEAAKLQKEREEIINIVQ-IEKRKRREME--NHINLRKRKLESIEKEDDINTALAK 704
R IE+ +++K E I Q +E++K+ E E + + KR+++ I KE +N + +
Sbjct: 426 REIEENQKRIEKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEINKE--LNQVMEQ 483
Query: 705 LVDQAADL---NIQQFKYAI--EIKNL--------LVEI---VSCKWSYAE-----KHMA 743
L D D + QQ K I IK L L+++ K+ A K+M
Sbjct: 484 LGDARIDRQESSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGKNMD 543
Query: 744 SIEFDAKI--RE-LEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFIT 800
+I D++ R+ +++ +Q + L Y + K E R+ L AK + I +
Sbjct: 544 AIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRE-LKGAKLVIDVIRYEP 602
Query: 801 PELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADK 860
P ++K L+ A + DN+ A I F H+ ++ ++
Sbjct: 603 PHIKKA-LQYACG----NALVCDNVEDARRIAFGGHQ-----RHKTVALDGTLFQKSG-- 650
Query: 861 KELKRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGIL 920
+ +++ A +W + + + E + +E A + + G+
Sbjct: 651 -VISGGASDLKAKARRWDEKAVDKLKEKKERLTEELKEQMKAKRKEAELRQVQSQAHGLQ 709
Query: 921 IKVKFRQSGQLEVLSAHH 938
+++K+ QS LE H
Sbjct: 710 MRLKYSQS-DLEQTKTRH 726
Score = 68 (29.0 bits), Expect = 0.00023, Sum P(3) = 0.00023
Identities = 37/174 (21%), Positives = 78/174 (44%)
Query: 750 KIRELEFNLKQHEKLALQ-ASL--HYEDCKKEVEHCRKHLSDAKRQAESIAF-ITPELEK 805
K R L NL++ KL + A+ D K+ ++ + + D K + + + E +
Sbjct: 723 KTRHLALNLQEKSKLESELANFGPRINDIKRIIQSREREMKDLKEKMNQVEDEVFEEFCR 782
Query: 806 EF-LEMPTTIEELEAAIQDNISQANSIFFLNQNILQ--EYEHRQRQIEDLSTKQEADKKE 862
E + EE + Q+ I++ + F NQ + + + Q+++ K ++
Sbjct: 783 EIGVRNIREFEEEKVKRQNEIAKKR-LEFENQKTRLGIQLDFEKNQLKEDQDKVHMWEQT 841
Query: 863 LKRFLAEIDALK---EKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESD 913
+K+ EI+ LK ++ + + +AQ+ + +N Q +A EV+ HE +
Sbjct: 842 VKKDENEIEKLKKEEQRHMKIIDETMAQLQDL--KN-QHLAKKSEVNDKNHEME 892
Score = 43 (20.2 bits), Expect = 3.1e-09, Sum P(3) = 3.1e-09
Identities = 18/75 (24%), Positives = 39/75 (52%)
Query: 379 ELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKL---LHALRNSGAENIF 435
E+GV + +++ E+EK+ QN++ + RL + E++ +L L +N E+
Sbjct: 783 EIGV----RNIREFEEEKVKRQNEIAKK----RL-EFENQKTRLGIQLDFEKNQLKEDQD 833
Query: 436 EAYCWLQQHRHELNK 450
+ + W Q + + N+
Sbjct: 834 KVHMWEQTVKKDENE 848
Score = 40 (19.1 bits), Expect = 6.2e-09, Sum P(3) = 6.2e-09
Identities = 18/70 (25%), Positives = 32/70 (45%)
Query: 489 GDRDFLAKNLKPFDVPILNYVSNESSRKEPFQISEEMRALGISARLDQVFDAPHAVKEVL 548
G D AK + +D ++ + + R ++ E+M+A A L QV H ++ L
Sbjct: 655 GASDLKAK-ARRWDEKAVDKLKEKKERLTE-ELKEQMKAKRKEAELRQVQSQAHGLQMRL 712
Query: 549 -ISQFGLDSS 557
SQ L+ +
Sbjct: 713 KYSQSDLEQT 722
Score = 39 (18.8 bits), Expect = 7.8e-09, Sum P(3) = 7.8e-09
Identities = 16/73 (21%), Positives = 34/73 (46%)
Query: 370 IEKLGSQILELGVQANQKRLQKSEKEKI---LNQNKLTLRQCSDRLKDMEDKNNKLLHAL 426
+E+ ++ L L +Q K +SE +N K ++ +KD+++K N++
Sbjct: 719 LEQTKTRHLALNLQEKSKL--ESELANFGPRINDIKRIIQSREREMKDLKEKMNQV---- 772
Query: 427 RNSGAENIFEAYC 439
+ +FE +C
Sbjct: 773 ----EDEVFEEFC 781
Score = 37 (18.1 bits), Expect = 1.2e-08, Sum P(3) = 1.2e-08
Identities = 11/52 (21%), Positives = 29/52 (55%)
Query: 375 SQILELGVQANQKRLQKSEKEKILNQNKLTLRQCS---DRLKDMEDKNNKLL 423
+Q LG+Q + ++ Q E + ++ + T+++ ++LK E ++ K++
Sbjct: 812 NQKTRLGIQLDFEKNQLKEDQDKVHMWEQTVKKDENEIEKLKKEEQRHMKII 863
>CGD|CAL0003745 [details] [associations]
symbol:SMC4 species:5476 "Candida albicans" [GO:0032116 "SMC
loading complex" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0000939 "condensed chromosome inner kinetochore"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0000799
"nuclear condensin complex" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=IEA] [GO:0007076 "mitotic chromosome condensation"
evidence=IEA] [GO:0070058 "tRNA gene clustering" evidence=IEA]
InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 CGD:CAL0003745
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0005694
GO:GO:0006281 GO:GO:0006310 GO:GO:0030261 EMBL:AACQ01000063
EMBL:AACQ01000062 GO:GO:0007062 eggNOG:COG1196 KO:K06675
SUPFAM:SSF75553 RefSeq:XP_716802.1 RefSeq:XP_716862.1
ProteinModelPortal:Q5A4Y2 STRING:Q5A4Y2 GeneID:3641522
GeneID:3641578 KEGG:cal:CaO19.8579 KEGG:cal:CaO19.964
Uniprot:Q5A4Y2
Length = 1368
Score = 118 (46.6 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 74/301 (24%), Positives = 122/301 (40%)
Query: 43 SRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSIGAYVKRGEES-GYIKISL---- 97
S + V+GPNGSGKS+++ ++ G + + G++ Y ++ +
Sbjct: 171 SSFSAVVGPNGSGKSNVIDSMLFVFGFRASKMRQGKLSELIHNSGDQRPDYCQVDIHFQM 230
Query: 98 ---------RGDT-KEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLT 147
+ D + L I RK N+S ++ NGK EV + K I +++
Sbjct: 231 VVDDLVVPQKADVVPDSELIISRKAFRNNQSSYYINGKTSSYSEVTTLLKNKGIDLDHKR 290
Query: 148 QFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTL 207
+ Q V A++ P + EK D L +V S K IE ++ R D L
Sbjct: 291 FLILQGEVESIAQMKP-----KAEKENDDGLLEYLE-DIVGTSKYKKLIEDSIVRI-DEL 343
Query: 208 NQ--LKALN----VEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAEYIXXXXXXX 261
N L+ N VE++KD+ ++ E L +E ++KKL K + E
Sbjct: 344 NDICLEKANRFDLVEKDKDLLE-EKKVEALRFLE-LEKKLINCKSVQFQIEISAHQKRIA 401
Query: 262 XXXXXXXXXXNTLHE---FSKPI-EGKKQEKAI---LDGDCKKLSSLINENSKRRMDFLE 314
L E +K I EG + E + ++ D K LS+ I+ K R D +
Sbjct: 402 AKQAEADAIEKELEENKESNKEILEGIESELSTQKEIERDIKVLSAEIDSLGKNRKDISK 461
Query: 315 K 315
K
Sbjct: 462 K 462
Score = 114 (45.2 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 70/327 (21%), Positives = 150/327 (45%)
Query: 656 KLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAADL--N 713
++ + + I ++ ++ E+E IN ++R L + K +++N+ L +L D+ D N
Sbjct: 1007 EINRHTKLIESLTTEQEEAEAELEK-INEQQRSL--LSKLEEVNSKLKELEDERNDKEDN 1063
Query: 714 IQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYE 773
+++ K+ +E K + K+ E IE K+ + + LK K A++ +
Sbjct: 1064 LEKMKHDLEEKQDQIN----KFKSVE-----IELLNKLEKCKGTLKGL-KQAIEQNKEEL 1113
Query: 774 DCK--KEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSI 831
D ++VE L + +++ + A I E++ ++ +E + + I++ + ++
Sbjct: 1114 DALVIRDVEPYISWLDETEQKKYNGALIDTLSEEDIADVD--LEAVTSEIEELENYMANV 1171
Query: 832 FFLNQNILQEYEHRQRQIEDLST--KQEADKKELKRFLAEIDALKEKWLPTLRNLVAQIN 889
++ IL+EY + + D + Q +++ K+ D LK K L I+
Sbjct: 1172 K-VDIEILKEYGAKIVEYNDKKSDLNQAVAERDSKKNYC--DDLKRKRLDEFMVGFNTIS 1228
Query: 890 ETFSRNFQEMAVAGEVSLDEHESDFDKF--GILIKVKFRQSGQLEVLSAHHQSGGERSVS 947
T ++ + + G L+ +S D F GIL V + + + SGGE+++S
Sbjct: 1229 MTLKDMYRMITMGGNAELELVDS-LDPFSEGILFSVMPPKKSWKNISNL---SGGEKTLS 1284
Query: 948 TILYLVSLQDLTNCPFRVVDEINQGMD 974
++ + +L P V+DEI+ +D
Sbjct: 1285 SLALVFALHKYKPTPLYVMDEIDAALD 1311
Score = 100 (40.3 bits), Expect = 8.7e-08, Sum P(2) = 8.7e-08
Identities = 42/216 (19%), Positives = 100/216 (46%)
Query: 657 LQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKE-DDINTALAKLVDQAAD---- 711
L E++E+ I + +++++E + N +++L S EKE +++ A ++ +Q +
Sbjct: 899 LVSEKKEVTQICKNLIAEQQKLEEN-NPFEQQLLSKEKELEELVNAKTQIKEQMSGFEQK 957
Query: 712 LNIQQFKY----AIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQ 767
+++ + K +E+K ++ S K + H + +++LE + +H KL
Sbjct: 958 ISVLEQKIMDVGGVELKVQSSKVDSIKQQISIIHEKTSGDRMTVKKLENEINRHTKLIES 1017
Query: 768 ASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQ 827
+ E+ + E+E + + E + ELE E + +E+++ +++ Q
Sbjct: 1018 LTTEQEEAEAELEKINEQQRSLLSKLEEVNSKLKELEDERNDKEDNLEKMKHDLEEKQDQ 1077
Query: 828 ANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKEL 863
N + +L + E + ++ L E +K+EL
Sbjct: 1078 INKFKSVEIELLNKLEKCKGTLKGLKQAIEQNKEEL 1113
Score = 86 (35.3 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 56/264 (21%), Positives = 114/264 (43%)
Query: 643 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTAL 702
M T+ + +E+E ++ + E I ++ + + E E I+ K ++S+ E T +
Sbjct: 850 MNTKLQEMENEFEQMNSDYNEKIAMLNKLQVLKPETEFAISRLKLDIQSLVSEKKEVTQI 909
Query: 703 AK-LVDQAADLNIQQ-FKYAIEIKNL-LVEIVSCKWSYAEKHMASIE-----FDAKIR-- 752
K L+ + L F+ + K L E+V+ K E+ M+ E + KI
Sbjct: 910 CKNLIAEQQKLEENNPFEQQLLSKEKELEELVNAKTQIKEQ-MSGFEQKISVLEQKIMDV 968
Query: 753 ---ELEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLE 809
EL+ + + + Q S+ +E + +K ++ R + I +T E E+ E
Sbjct: 969 GGVELKVQSSKVDSIKQQISIIHEKTSGDRMTVKKLENEINRHTKLIESLTTEQEEAEAE 1028
Query: 810 MPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLA- 868
+ I E + ++ + + NS + + E ++ +E + E + ++ +F +
Sbjct: 1029 LEK-INEQQRSLLSKLEEVNSKL---KELEDERNDKEDNLEKMKHDLEEKQDQINKFKSV 1084
Query: 869 EIDALK--EKWLPTLRNLVAQINE 890
EI+ L EK TL+ L I +
Sbjct: 1085 EIELLNKLEKCKGTLKGLKQAIEQ 1108
Score = 81 (33.6 bits), Expect = 7.7e-06, Sum P(2) = 7.7e-06
Identities = 47/255 (18%), Positives = 109/255 (42%)
Query: 646 EQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESI---------EKED 696
E E + +KE EE++N K + E I++ ++K+ + K D
Sbjct: 922 ENNPFEQQLLSKEKELEELVNAKTQIKEQMSGFEQKISVLEQKIMDVGGVELKVQSSKVD 981
Query: 697 DINTALAKLVDQAAD--LNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIREL 754
I ++ + ++ + + +++ + I L+E ++ + AE + I + + R L
Sbjct: 982 SIKQQISIIHEKTSGDRMTVKKLENEINRHTKLIESLTTEQEEAEAELEKI--NEQQRSL 1039
Query: 755 EFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTI 814
L++ + D + +E + L + + Q + EL + + T+
Sbjct: 1040 LSKLEEVNSKLKELEDERNDKEDNLEKMKHDLEEKQDQINKFKSVEIELLNKLEKCKGTL 1099
Query: 815 EELEAAIQDNISQANSIFFLNQ----NILQEYEHRQRQ---IEDLSTKQEADKKELKRFL 867
+ L+ AI+ N + +++ + + L E E ++ I+ LS + AD +L+
Sbjct: 1100 KGLKQAIEQNKEELDALVIRDVEPYISWLDETEQKKYNGALIDTLSEEDIADV-DLEAVT 1158
Query: 868 AEIDALKEKWLPTLR 882
+EI+ L E ++ ++
Sbjct: 1159 SEIEEL-ENYMANVK 1172
Score = 72 (30.4 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 43/212 (20%), Positives = 94/212 (44%)
Query: 643 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESI-----EKEDD 697
+ TEQ E E K+ +++ +++ ++ K +E+E+ N ++ LE + EK+D
Sbjct: 1018 LTTEQEEAEAELEKINEQQRSLLSKLEEVNSKLKELEDERNDKEDNLEKMKHDLEEKQDQ 1077
Query: 698 INTALAKLVDQAADLN-----IQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIR 752
IN + ++ L ++ K AIE +N E+ + E +++ ++ +
Sbjct: 1078 INKFKSVEIELLNKLEKCKGTLKGLKQAIE-QNK-EELDALVIRDVEPYISWLD---ETE 1132
Query: 753 ELEFNLKQHEKLALQ--ASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEM 810
+ ++N + L+ + A + E E+E ++++ K E I E + +E
Sbjct: 1133 QKKYNGALIDTLSEEDIADVDLEAVTSEIEELENYMANVKVDIE----ILKEYGAKIVEY 1188
Query: 811 PTTIEELEAAIQDNISQANSIFFLNQNILQEY 842
+L A+ + S+ N L + L E+
Sbjct: 1189 NDKKSDLNQAVAERDSKKNYCDDLKRKRLDEF 1220
Score = 65 (27.9 bits), Expect = 0.00042, Sum P(3) = 0.00042
Identities = 40/176 (22%), Positives = 73/176 (41%)
Query: 786 LSDAKRQAESIAFITPELEK---EFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEY 842
LSD+ + A ELEK + EM E++ + + I+ N + L
Sbjct: 831 LSDSSNSNDQ-AITADELEKMNTKLQEMENEFEQMNSDYNEKIAMLNKLQVLKPETEFAI 889
Query: 843 EHRQRQIEDLSTKQEADKKELKRFLAEIDAL------------KEKWLPTLRNLVAQINE 890
+ I+ L ++++ + K +AE L KEK L L N QI E
Sbjct: 890 SRLKLDIQSLVSEKKEVTQICKNLIAEQQKLEENNPFEQQLLSKEKELEELVNAKTQIKE 949
Query: 891 TFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQL--EVLSAHHQSGGER 944
S F++ ++S+ E + D G+ +KV+ + + ++ H ++ G+R
Sbjct: 950 QMS-GFEQ-----KISVLEQKI-MDVGGVELKVQSSKVDSIKQQISIIHEKTSGDR 998
Score = 46 (21.3 bits), Expect = 0.00042, Sum P(3) = 0.00042
Identities = 14/60 (23%), Positives = 29/60 (48%)
Query: 643 MQTEQRLIEDEAAKLQKEREEIINIVQ-IEKR------KRREMENHINLRKRKLESIEKE 695
++TE+ + D + L ++ E +Q ++K K +E EN I L + +E + +
Sbjct: 519 LETEEARLNDIRSSLTEKTSEFTKEIQSLQKSLDPWDSKLKEKENEIKLAESAIEILRSQ 578
>UNIPROTKB|Q5LNH7 [details] [associations]
symbol:smc "Chromosome partition protein Smc"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003824 "catalytic
activity" evidence=ISS] [GO:0007059 "chromosome segregation"
evidence=ISS] InterPro:IPR024704 HAMAP:MF_01894 InterPro:IPR010935
InterPro:IPR011890 PIRSF:PIRSF005719 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005737 GO:GO:0005694
GO:GO:0007059 GO:GO:0003824 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0003677 GO:GO:0006260 GO:GO:0006281 GO:GO:0006310
GO:GO:0030261 GO:GO:0007062 SUPFAM:SSF75553 KO:K03529
RefSeq:YP_168431.1 ProteinModelPortal:Q5LNH7 GeneID:3194939
KEGG:sil:SPO3228 PATRIC:23379903 HOGENOM:HOG000036390 OMA:AHERVQA
ProtClustDB:CLSK864767 Uniprot:Q5LNH7
Length = 1151
Score = 140 (54.3 bits), Expect = 3.3e-09, Sum P(3) = 3.3e-09
Identities = 68/274 (24%), Positives = 122/274 (44%)
Query: 729 EIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSD 788
E + + A +AS E K RE ++ +LA +A + E R+ +
Sbjct: 842 ETAEARRAEAADRLASGE--TKHREAALAEREAARLASEAREGRAAAEARAEAARETMQA 899
Query: 789 AKRQAESIAFITPE--LEKEFLE---MPTTIEELEAAIQDNISQANSIFFLNQNILQEYE 843
A + +TP L K +E MP + + LEA + + Q +++ +N ++
Sbjct: 900 AAERIAEEQQVTPNQLLSKLGVEPDAMPDS-DALEAEVNRHKRQRDAMGAVNLRAEEDAR 958
Query: 844 HRQRQIEDLSTKQEADKKE-LKRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEMAVA 902
Q + + LS K+++D +E +K + I +L + L Q+N F+ F+ +
Sbjct: 959 EVQEEFDSLS-KEKSDLEEAVKTLRSGIASLNREGRERLLTAFEQVNSNFAMLFRHLFGG 1017
Query: 903 GEVSLDEHESDFDKFGILIKVKFRQSGQ-LEVLSAHHQSGGERSVSTILYLVSLQDLTN- 960
GE +L ESD D +++ + G+ L LS SGGE+++ T + L+ L N
Sbjct: 1018 GEANLVMVESD-DPLDAGLEIMCQPPGKKLSTLSL--LSGGEQTL-TAMALIFAVFLANP 1073
Query: 961 CPFRVVDEINQGMDPINERKMFQQLVRAASQPNT 994
P V+DE++ +D N + L Q +T
Sbjct: 1074 APICVLDEVDAPLDDANVTRFCDLLDEMCRQTDT 1107
Score = 97 (39.2 bits), Expect = 3.3e-09, Sum P(3) = 3.3e-09
Identities = 61/248 (24%), Positives = 96/248 (38%)
Query: 26 IELHNFMTF---DHLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSIGA 82
++L F +F LI G L ++GPNG GKS+L+ A+ +G + R +
Sbjct: 6 LKLTGFKSFVDPTDLIIADG--LTGIVGPNGCGKSNLLEALRWVMGENRPKAMRGGGMED 63
Query: 83 YVKRGEES----GYIKISLRGDTKE----------EHLTIMRKIDTRNKSEWFFNGKVVP 128
+ G S + +++L D E + L I+R+I S + NGK V
Sbjct: 64 VIFAGASSRPARNFAEVTLLMDNSERLAPSGFNDADQLEIVRRITRDVGSAYKANGKDVR 123
Query: 129 KGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQL-PVQHCALV 187
+V + + ++ + Q ++ E P E+A G L +H
Sbjct: 124 ARDVQILFADASTGAHS-PALVRQGQIAELINAKPTSRRRILEEAAGISGLYQRRH---- 178
Query: 188 EKSSKLKTIECTVKRNGDTLNQLK---ALNVEQEKDVERVRQRAELLEKVESMKKKLPWL 244
E KLK E + R D L QL A Q + R R+ E L E W
Sbjct: 179 EAELKLKGTETNLTRVDDVLEQLGTQLAQLARQARQAARYREIGEQLRLAEGQLLYRRWR 238
Query: 245 KYDMKKAE 252
D +A+
Sbjct: 239 DADEARAK 246
Score = 60 (26.2 bits), Expect = 1.7e-05, Sum P(3) = 1.7e-05
Identities = 23/75 (30%), Positives = 36/75 (48%)
Query: 368 DKIEKLGSQILELGVQANQKRLQKSEKEKI-LNQNKLTLRQCSD----RLKDMEDKNNKL 422
D +E+LG+Q+ +L QA Q + E++ L + +L R+ D R K E ++
Sbjct: 196 DVLEQLGTQLAQLARQARQAARYREIGEQLRLAEGQLLYRRWRDADEARAKAEEVLRHRT 255
Query: 423 LHALRNSGAENIFEA 437
L A R A EA
Sbjct: 256 LDASRAEAAARQAEA 270
Score = 40 (19.1 bits), Expect = 3.3e-09, Sum P(3) = 3.3e-09
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 644 QTEQRLIEDEAAKLQK-EREE 663
Q+ QRL+ED L + E EE
Sbjct: 399 QSAQRLVEDSRKTLARSEAEE 419
>TIGR_CMR|SPO_3228 [details] [associations]
symbol:SPO_3228 "SMC protein" species:246200 "Ruegeria
pomeroyi DSS-3" [GO:0003824 "catalytic activity" evidence=ISS]
[GO:0007059 "chromosome segregation" evidence=ISS]
InterPro:IPR024704 HAMAP:MF_01894 InterPro:IPR010935
InterPro:IPR011890 PIRSF:PIRSF005719 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005737 GO:GO:0005694
GO:GO:0007059 GO:GO:0003824 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0003677 GO:GO:0006260 GO:GO:0006281 GO:GO:0006310
GO:GO:0030261 GO:GO:0007062 SUPFAM:SSF75553 KO:K03529
RefSeq:YP_168431.1 ProteinModelPortal:Q5LNH7 GeneID:3194939
KEGG:sil:SPO3228 PATRIC:23379903 HOGENOM:HOG000036390 OMA:AHERVQA
ProtClustDB:CLSK864767 Uniprot:Q5LNH7
Length = 1151
Score = 140 (54.3 bits), Expect = 3.3e-09, Sum P(3) = 3.3e-09
Identities = 68/274 (24%), Positives = 122/274 (44%)
Query: 729 EIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSD 788
E + + A +AS E K RE ++ +LA +A + E R+ +
Sbjct: 842 ETAEARRAEAADRLASGE--TKHREAALAEREAARLASEAREGRAAAEARAEAARETMQA 899
Query: 789 AKRQAESIAFITPE--LEKEFLE---MPTTIEELEAAIQDNISQANSIFFLNQNILQEYE 843
A + +TP L K +E MP + + LEA + + Q +++ +N ++
Sbjct: 900 AAERIAEEQQVTPNQLLSKLGVEPDAMPDS-DALEAEVNRHKRQRDAMGAVNLRAEEDAR 958
Query: 844 HRQRQIEDLSTKQEADKKE-LKRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEMAVA 902
Q + + LS K+++D +E +K + I +L + L Q+N F+ F+ +
Sbjct: 959 EVQEEFDSLS-KEKSDLEEAVKTLRSGIASLNREGRERLLTAFEQVNSNFAMLFRHLFGG 1017
Query: 903 GEVSLDEHESDFDKFGILIKVKFRQSGQ-LEVLSAHHQSGGERSVSTILYLVSLQDLTN- 960
GE +L ESD D +++ + G+ L LS SGGE+++ T + L+ L N
Sbjct: 1018 GEANLVMVESD-DPLDAGLEIMCQPPGKKLSTLSL--LSGGEQTL-TAMALIFAVFLANP 1073
Query: 961 CPFRVVDEINQGMDPINERKMFQQLVRAASQPNT 994
P V+DE++ +D N + L Q +T
Sbjct: 1074 APICVLDEVDAPLDDANVTRFCDLLDEMCRQTDT 1107
Score = 97 (39.2 bits), Expect = 3.3e-09, Sum P(3) = 3.3e-09
Identities = 61/248 (24%), Positives = 96/248 (38%)
Query: 26 IELHNFMTF---DHLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSIGA 82
++L F +F LI G L ++GPNG GKS+L+ A+ +G + R +
Sbjct: 6 LKLTGFKSFVDPTDLIIADG--LTGIVGPNGCGKSNLLEALRWVMGENRPKAMRGGGMED 63
Query: 83 YVKRGEES----GYIKISLRGDTKE----------EHLTIMRKIDTRNKSEWFFNGKVVP 128
+ G S + +++L D E + L I+R+I S + NGK V
Sbjct: 64 VIFAGASSRPARNFAEVTLLMDNSERLAPSGFNDADQLEIVRRITRDVGSAYKANGKDVR 123
Query: 129 KGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQL-PVQHCALV 187
+V + + ++ + Q ++ E P E+A G L +H
Sbjct: 124 ARDVQILFADASTGAHS-PALVRQGQIAELINAKPTSRRRILEEAAGISGLYQRRH---- 178
Query: 188 EKSSKLKTIECTVKRNGDTLNQLK---ALNVEQEKDVERVRQRAELLEKVESMKKKLPWL 244
E KLK E + R D L QL A Q + R R+ E L E W
Sbjct: 179 EAELKLKGTETNLTRVDDVLEQLGTQLAQLARQARQAARYREIGEQLRLAEGQLLYRRWR 238
Query: 245 KYDMKKAE 252
D +A+
Sbjct: 239 DADEARAK 246
Score = 60 (26.2 bits), Expect = 1.7e-05, Sum P(3) = 1.7e-05
Identities = 23/75 (30%), Positives = 36/75 (48%)
Query: 368 DKIEKLGSQILELGVQANQKRLQKSEKEKI-LNQNKLTLRQCSD----RLKDMEDKNNKL 422
D +E+LG+Q+ +L QA Q + E++ L + +L R+ D R K E ++
Sbjct: 196 DVLEQLGTQLAQLARQARQAARYREIGEQLRLAEGQLLYRRWRDADEARAKAEEVLRHRT 255
Query: 423 LHALRNSGAENIFEA 437
L A R A EA
Sbjct: 256 LDASRAEAAARQAEA 270
Score = 40 (19.1 bits), Expect = 3.3e-09, Sum P(3) = 3.3e-09
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 644 QTEQRLIEDEAAKLQK-EREE 663
Q+ QRL+ED L + E EE
Sbjct: 399 QSAQRLVEDSRKTLARSEAEE 419
>MGI|MGI:1917349 [details] [associations]
symbol:Smc4 "structural maintenance of chromosomes 4"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000796 "condensin complex" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0007062 "sister chromatid cohesion"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0007076
"mitotic chromosome condensation" evidence=ISO] [GO:0010032
"meiotic chromosome condensation" evidence=IMP] [GO:0030261
"chromosome condensation" evidence=IEA] [GO:0045132 "meiotic
chromosome segregation" evidence=IMP] [GO:0046982 "protein
heterodimerization activity" evidence=ISO] [GO:0051276 "chromosome
organization" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0051383 "kinetochore organization" evidence=IMP]
InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 MGI:MGI:1917349
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0051301 GO:GO:0006281 GO:GO:0006310 GO:GO:0046982
GO:GO:0045132 GO:GO:0007076 GO:GO:0051383 GO:GO:0000796
GO:GO:0010032 GO:GO:0007062 eggNOG:COG1196
GeneTree:ENSGT00580000081617 KO:K06675 SUPFAM:SSF75553 PDB:3L51
PDBsum:3L51 OMA:IAIEFLT CTD:10051 HOGENOM:HOG000184777
HOVERGEN:HBG106696 OrthoDB:EOG4PZJ5V EMBL:AJ534940 EMBL:BC005507
EMBL:BC062939 EMBL:AK088350 EMBL:AK088846 IPI:IPI00229397
RefSeq:NP_598547.1 UniGene:Mm.206841 ProteinModelPortal:Q8CG47
SMR:Q8CG47 STRING:Q8CG47 PhosphoSite:Q8CG47 PaxDb:Q8CG47
PRIDE:Q8CG47 Ensembl:ENSMUST00000042901 GeneID:70099 KEGG:mmu:70099
UCSC:uc008pma.1 InParanoid:Q8CG47 ChiTaRS:SMC4
EvolutionaryTrace:Q8CG47 NextBio:330998 Bgee:Q8CG47 CleanEx:MM_SMC4
Genevestigator:Q8CG47 GermOnline:ENSMUSG00000034349 Uniprot:Q8CG47
Length = 1286
Score = 135 (52.6 bits), Expect = 4.0e-09, Sum P(3) = 4.0e-09
Identities = 65/321 (20%), Positives = 147/321 (45%)
Query: 668 VQIEKRKRREMENHINLRKRKLESIEKE-DDINTALAKLVDQAADL--NIQQFKYAI-EI 723
++ R ++ ++ + +++++ EKE +D+ T L + D+A ++ N + + ++ EI
Sbjct: 925 IKTADRNLKKAQDSVCRTEKEIKDTEKEINDLKTELKNIEDKAEEVINNTKTAETSLPEI 984
Query: 724 ----KNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYEDCKKEV 779
+NLL E+ + + ++ K+ +++ ++ +H + + Y +KE+
Sbjct: 985 QKEHRNLLQELKVIQENEHALQKDALSIKLKLEQIDGHISEHN-----SKIKY--WQKEI 1037
Query: 780 EHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNIL 839
+ H + E++A ++ E E E ++ P +I A ++ + N +
Sbjct: 1038 SKIKLHPVE-DNPVETVAVLSQE-ELEAIKNPESITNEIALLEAQCREMKP----NLGAI 1091
Query: 840 QEYEHRQRQIEDLSTKQ--EADK--KELKRFLAEIDALKEKWLPTLRNLVAQINETFSRN 895
EY+ + EDL ++ E DK E F + L+++ L I N
Sbjct: 1092 AEYKKK----EDLYLQRVAELDKITSERDNFRQAYEDLRKQRLNEFMAGFYVITNKLKEN 1147
Query: 896 FQEMAVAGEVSLDEHESDFDKF--GILIKVKFRQSGQLEVLSAHHQSGGERSVSTILYLV 953
+Q + + G+ L+ +S D F GI+ V+ + ++ + SGGE+++S++ +
Sbjct: 1148 YQMLTLGGDAELELVDS-LDPFSEGIMFSVRPPKKSWKKIFNL---SGGEKTLSSLALVF 1203
Query: 954 SLQDLTNCPFRVVDEINQGMD 974
+L P +DEI+ +D
Sbjct: 1204 ALHHYKPTPLYFMDEIDAALD 1224
Score = 99 (39.9 bits), Expect = 4.0e-09, Sum P(3) = 4.0e-09
Identities = 74/327 (22%), Positives = 134/327 (40%)
Query: 23 IIEIELHNFMTF-DHLICKP-GSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI 80
I I NF ++ + P R + +IGPNGSGKS+++ ++ G Q + R+ +
Sbjct: 82 ITHIVNQNFKSYAGEKVLGPFHKRFSCIIGPNGSGKSNVIDSMLFVFGYRAQKI-RSKKL 140
Query: 81 GAYVKRGEESGYIK-----------ISLRGDTKE----EHLTIMRKIDTRNKSEWFFNGK 125
+ +E I+ I GD E + + R + S + +GK
Sbjct: 141 SVLIHNSDEHKDIQSCTVEVHFQKIIDKEGDDYEVLPNSNFYVSRTAYRDSTSVYHISGK 200
Query: 126 VVPKGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCA 185
+V + + I +++ + Q V + A + P K E ++ + + + C
Sbjct: 201 KKTFKDVGNLLRSHGIDLDHNRFLILQGEVEQIAMMKP-KGQTEHDEGMLEYLEDIIGCG 259
Query: 186 LVEKSSKL--KTIECTVKRNGDTLNQLKALNVEQEKD-VERVRQRA-ELLE-KVESMKKK 240
+ + K+ + +E + G+ LN++K VE+EKD +E + A E L + E KKK
Sbjct: 260 RLNEPIKVLCRRVEILNEHRGEKLNRVKM--VEKEKDALEGEKNIAIEFLTLENEMFKKK 317
Query: 241 LPWLKYDMKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSS 300
+Y YI +HE +K I K +L + K +S
Sbjct: 318 NHICQY------YIYDLQNRIAEITTQK---EKIHEDTKEITEKSN---VLSNEMKAKNS 365
Query: 301 LINENSKRRMDFLEKVDQGVQVQGKYK 327
+ + K+ L KV + ++ Q K K
Sbjct: 366 AVKDVEKK----LNKVTKFIE-QNKEK 387
Score = 92 (37.4 bits), Expect = 0.00010, Sum P(3) = 0.00010
Identities = 31/174 (17%), Positives = 82/174 (47%)
Query: 659 KEREEIINIVQIEKRKRREMENHINLRKRKLESI-EKEDDINTALAKLVDQAADLNIQQF 717
KE E + ++++++ +E ++++ K++ +++ EK + + +L + D+N ++
Sbjct: 838 KELEANVLTTAPDRKQQKLLEENVSVFKKEYDAVAEKAGKVEAEIKRLHNTIIDINNRKL 897
Query: 718 K-YAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYEDCK 776
K ++ + ++ C + + +A D +++ + ++ + EK D K
Sbjct: 898 KAQQNKLDTINKQLDECASAITKAQVAIKTADRNLKKAQDSVCRTEKEIKDTEKEINDLK 957
Query: 777 KEVEHCRKHLSDAKRQAESIAFITPELEKE---FLEMPTTIEELEAAIQ-DNIS 826
E+++ + ++ PE++KE L+ I+E E A+Q D +S
Sbjct: 958 TELKNIEDKAEEVINNTKTAETSLPEIQKEHRNLLQELKVIQENEHALQKDALS 1011
Score = 84 (34.6 bits), Expect = 0.00063, Sum P(3) = 0.00063
Identities = 38/184 (20%), Positives = 86/184 (46%)
Query: 646 EQRLIEDEAAKLQKEREEIINIV-QIEKRKRREMENHINLRKRKLESIE-KEDDINTALA 703
+Q+L+E+ + +KE + + ++E +R I++ RKL++ + K D IN
Sbjct: 853 QQKLLEENVSVFKKEYDAVAEKAGKVEAEIKRLHNTIIDINNRKLKAQQNKLDTIN---- 908
Query: 704 KLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEK 763
K +D+ A I + + AI+ + ++ EK + E +I +L+ LK E
Sbjct: 909 KQLDECASA-ITKAQVAIKTADRNLKKAQDSVCRTEKEIKDTE--KEINDLKTELKNIED 965
Query: 764 LALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQD 823
A + + + + + +K + ++ + I L+K+ L + +E+++ I +
Sbjct: 966 KAEEVINNTKTAETSLPEIQKEHRNLLQELKVIQENEHALQKDALSIKLKLEQIDGHISE 1025
Query: 824 NISQ 827
+ S+
Sbjct: 1026 HNSK 1029
Score = 73 (30.8 bits), Expect = 1.6e-06, Sum P(3) = 1.6e-06
Identities = 35/155 (22%), Positives = 71/155 (45%)
Query: 102 KEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKL 161
K+ H+ D +N+ K + EIT++ N+ N + + E KL
Sbjct: 316 KKNHICQYYIYDLQNRIAEITTQKEKIHEDTKEITEKSNVLSNEMKAKNSAVKDVE-KKL 374
Query: 162 SPV-KLLEETEKAVGDPQLPVQHCALVEK----SSKLKTIECTVKRNGDTLNQLKALNVE 216
+ V K +E+ ++ QL ++ + EK +SK K +E ++++ + + +LK++ +
Sbjct: 375 NKVTKFIEQNKEKF--TQLDLEDVQVREKLKHATSKAKKLEKQLQKDKEKVEELKSVPAK 432
Query: 217 QEKDVERVRQRAELLEKV-ESMKKKLPWLKYDMKK 250
+ + R LEK E +KKL + +K+
Sbjct: 433 SKTVINETTTRNNSLEKEREKEEKKLKEVMDSLKQ 467
Score = 65 (27.9 bits), Expect = 1.0e-05, Sum P(3) = 1.0e-05
Identities = 28/114 (24%), Positives = 58/114 (50%)
Query: 142 QVNNLTQFLPQDRVCEFAKLS--PVKLLEETEKAVGDPQ-LPVQHCALVEKSSKLKTIEC 198
++N +T+F+ Q++ +F +L V++ E+ + A + L Q EK +LK++
Sbjct: 373 KLNKVTKFIEQNKE-KFTQLDLEDVQVREKLKHATSKAKKLEKQLQKDKEKVEELKSVPA 431
Query: 199 TVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAE 252
K +N+ N EK ER ++ +L E ++S+K++ L+ + + E
Sbjct: 432 KSKT---VINETTTRNNSLEK--EREKEEKKLKEVMDSLKQETQGLQKEKEIQE 480
Score = 51 (23.0 bits), Expect = 0.00024, Sum P(3) = 0.00024
Identities = 18/65 (27%), Positives = 30/65 (46%)
Query: 185 ALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRA--------ELLEKVES 236
AL+ S LK + +K L Q + E+EK+++++ Q +L +KVE
Sbjct: 524 ALITASETLKERKAAIKDINTKLPQTQQELKEKEKELQKLTQEEINLKSLVHDLFQKVEE 583
Query: 237 MKKKL 241
K L
Sbjct: 584 AKSSL 588
Score = 45 (20.9 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 15/55 (27%), Positives = 30/55 (54%)
Query: 370 IEKLGSQILELGVQANQKRLQKSEKEKILNQNKLT--LRQCSDRLKDMEDKNNKL 422
I L ++I E+ Q ++++ + KE N L+ ++ + +KD+E K NK+
Sbjct: 325 IYDLQNRIAEITTQ--KEKIHEDTKEITEKSNVLSNEMKAKNSAVKDVEKKLNKV 377
Score = 45 (20.9 bits), Expect = 0.00093, Sum P(3) = 0.00093
Identities = 39/186 (20%), Positives = 79/186 (42%)
Query: 74 LGRATSIGAYVKRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPK-GEV 132
L ATS +++ + K+ + T++ + TRN S K K EV
Sbjct: 402 LKHATSKAKKLEKQLQKDKEKVEELKSVPAKSKTVINETTTRNNSLEKEREKEEKKLKEV 461
Query: 133 LEITKRFNIQVNNLTQFLPQDRVCEFAK-LSPVKLLEETEKAVGDPQLPVQHCALVEKSS 191
++ K+ Q + + + + F K ++ + E ++ D L +H V + S
Sbjct: 462 MDSLKQ-ETQGLQKEKEIQEKELMGFNKSVNEARSKMEVAQSELDIYLS-RHNTAVSQLS 519
Query: 192 KLKTIECTVKRNGDTLNQLKA----LNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYD 247
K K T +TL + KA +N + + + ++++ + L+K+ + L L +D
Sbjct: 520 KAKEALITAS---ETLKERKAAIKDINTKLPQTQQELKEKEKELQKLTQEEINLKSLVHD 576
Query: 248 M-KKAE 252
+ +K E
Sbjct: 577 LFQKVE 582
Score = 44 (20.5 bits), Expect = 4.0e-09, Sum P(3) = 4.0e-09
Identities = 28/101 (27%), Positives = 45/101 (44%)
Query: 368 DKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALR 427
+++ K+ SQ+ QA Q + QK + E+ + + LR S+R DM + K +++
Sbjct: 772 EEVNKMESQLERHSKQAMQIQEQKVQHEEAV----VKLRH-SER--DMRNTLEKFAASIQ 824
Query: 428 NSGAENIFEAYCWLQQHRHELNKEAYGP-----VLLEVNVS 463
+ E Y +Q E N P LLE NVS
Sbjct: 825 GLSEQ---EEYLCVQIKELEANVLTTAPDRKQQKLLEENVS 862
Score = 39 (18.8 bits), Expect = 1.3e-08, Sum P(3) = 1.3e-08
Identities = 11/46 (23%), Positives = 22/46 (47%)
Query: 368 DKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLK 413
+K+E+L S + N+ + + EK + + L++ D LK
Sbjct: 421 EKVEELKSVPAKSKTVINETTTRNNSLEKEREKEEKKLKEVMDSLK 466
>UNIPROTKB|F6V533 [details] [associations]
symbol:SMC1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030261 "chromosome condensation"
evidence=IEA] [GO:0007062 "sister chromatid cohesion" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0005694 "chromosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR024704
InterPro:IPR010935 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0005694
GO:GO:0006281 GO:GO:0006310 GO:GO:0030261 GO:GO:0007062
SUPFAM:SSF75553 GeneTree:ENSGT00580000081569 EMBL:AAEX03007228
EMBL:AAEX03007229 EMBL:AAEX03007230 Ensembl:ENSCAFT00000001296
Uniprot:F6V533
Length = 1079
Score = 132 (51.5 bits), Expect = 5.8e-09, Sum P(3) = 5.8e-09
Identities = 69/300 (23%), Positives = 127/300 (42%)
Query: 21 GNIIEIELHNFMTF-DHLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATS 79
G + + + NF ++ H + P R +IGPNGSGKS+++ A++ +G T L R +
Sbjct: 2 GRLEVLLVENFKSWRGHQVIGPFRRFTCIIGPNGSGKSNVMDALSFVMGEKTANL-RVKN 60
Query: 80 I-----GAYVKRG-EESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVL 133
I GA++ R S +KI ++ EE T R I SE+ F+ V + +
Sbjct: 61 IQELIHGAHIGRPVSSSASVKIVYVEESGEEK-TFTRII-RGGCSEFHFDDNPVSRSAYI 118
Query: 134 EITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKL 193
++ I V + Q V + P + + E+ +L ++ EK KL
Sbjct: 119 AELEKIGIIVKARNCLVFQGTVESISMKKPKERTQFFEEISTSGELIGEY---EEKKRKL 175
Query: 194 KTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLE--KVESMKKKLPWLKYDMKKA 251
+ E + N + + A + + E + LLE K+ ++ +L L ++ KK
Sbjct: 176 QKAEEDAQFNFNKKKNVAAERKHAKLEKEEAERYQSLLEELKMNKIQLQLFQLYHNEKKI 235
Query: 252 EYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAIL-------DGDCKKLSSLINE 304
++ + HE ++ KK+E +L + + K L +L+N+
Sbjct: 236 HFLNTELEHVSRNLSVTKESLSRHE--NTVKAKKKEHGMLTRQLQQTEKELKSLEALLNQ 293
Score = 91 (37.1 bits), Expect = 5.8e-09, Sum P(3) = 5.8e-09
Identities = 78/393 (19%), Positives = 171/393 (43%)
Query: 644 QTEQRLIEDEAAKLQKEREEIINIVQIE---KRKRREMEN-HINLR--KRKLESIEKED- 696
+ E + + D A+L +E ++++ I++ E K+ + ++ H L+ + +LE I+K+
Sbjct: 668 EKEIKNLRDRRAQLIQELKDLMKILRKEADLKQIQTLVQGTHTRLKYSQSELEMIKKKQL 727
Query: 697 ----DINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMA--SIEFDAK 750
+ L+ L + L I E+ E+V + S +K + ++ D K
Sbjct: 728 AAFYRASYELSYLDFRVRKLKIDGCSLRKEVGKWQKEVVIIQTSLEQKRLEKHNLLLDCK 787
Query: 751 IRELEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEM 810
++++E L L SL + + E E + + D + E+I L + L++
Sbjct: 788 VQDIEIIL-------LLGSLD-DIIEVEAESTQATV-DIYEKEEAIEIDYSSLRDD-LKV 837
Query: 811 PTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEI 870
E L +I + A + ++ R+ E+ T EA KKE + E
Sbjct: 838 S---ERLVNSINRDTEGATILQHPGCGPSASHQTRKYGRENRCTAFEASKKEARMCRQEF 894
Query: 871 DALKEK----WLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFR 926
+ +K++ + ++ I+E + + + ++ +S + E + + GI
Sbjct: 895 EQVKKRRYDLFSQCFEHVSISIDEIYKKLCRNVSAQAFLSPENPEEPYLE-GISYNCV-- 951
Query: 927 QSGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLV 986
G+ + + SGGE+ V+ + L ++ PF V+DE++ +D N K+ +
Sbjct: 952 APGK-RFMPMDNLSGGEKCVAALALLFAVHSFRPAPFFVLDEVDAALDNTNIGKV-SSYI 1009
Query: 987 RAASQPNTPQCFLLTPKLLPDLEYSEACSILNI 1019
+ +Q Q +++ L + YS+A +++ +
Sbjct: 1010 KEQTQEQF-QMIIIS---LKEEFYSKADALIGV 1038
Score = 66 (28.3 bits), Expect = 5.3e-06, Sum P(2) = 5.3e-06
Identities = 48/242 (19%), Positives = 103/242 (42%)
Query: 645 TEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAK 704
T++ L E K++E + Q+++ ++ L +++ + I+ +++ + L K
Sbjct: 252 TKESLSRHENTVKAKKKEHGMLTRQLQQTEKELKSLEALLNQKRPQYIKAKENTSHHLKK 311
Query: 705 LVDQAA----DLNIQQFKYAIEIKNLLVEIVSCK--WSYAEKHMASIEFDAKIRELEFNL 758
L D A D Q K +IK L E+V W EK + E K R++E
Sbjct: 312 L-DVAKKSIKDSEKQCSKQEDDIKALETELVDLDGAWRSFEKQVEE-EILHKGRDIELEA 369
Query: 759 KQHEKLALQASLHYEDCKKEVEHCRKHLS----DAKRQAESIAFITPELEKEFLEMPTTI 814
Q ++ L E +K+V + L + K E +AF E + E+ +
Sbjct: 370 SQLDRYK---GLK-EQVRKKVAIMTQQLEKLHWEQKADKERLAF---ERRRHG-EVQENL 421
Query: 815 EELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALK 874
++++ I+D+ + + + + + +++Q E L + E K + E++ ++
Sbjct: 422 KQIKEQIEDHKKRIEKLEEYTKTCMDCLKEKKQQEETLVGEIENTKSRMSEVNEELNLIR 481
Query: 875 EK 876
+
Sbjct: 482 SE 483
Score = 56 (24.8 bits), Expect = 0.00043, Sum P(3) = 0.00043
Identities = 33/140 (23%), Positives = 58/140 (41%)
Query: 690 ESIEKEDDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSY-AEKHMASIEFD 748
E + K DI ++L D+ L +Q + + I +E W A+K + E
Sbjct: 357 EILHKGRDIELEASQL-DRYKGLK-EQVRKKVAIMTQQLE--KLHWEQKADKERLAFE-R 411
Query: 749 AKIRELEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFL 808
+ E++ NLKQ ++ E ++ + C L + K+Q E++ E+E
Sbjct: 412 RRHGEVQENLKQIKEQIEDHKKRIEKLEEYTKTCMDCLKEKKQQEETLV---GEIENTKS 468
Query: 809 EMPTTIEELEAAIQDNISQA 828
M EEL I+ + A
Sbjct: 469 RMSEVNEELNL-IRSELQNA 487
Score = 51 (23.0 bits), Expect = 5.8e-09, Sum P(3) = 5.8e-09
Identities = 19/71 (26%), Positives = 36/71 (50%)
Query: 363 YEPPHDKIEKLGSQILELG-VQANQKRLQKS---EKEKILNQNKLTLRQCSDRLKDMEDK 418
+E DK E+L + G VQ N K++++ K++I + T + C D LK+ + +
Sbjct: 398 WEQKADK-ERLAFERRRHGEVQENLKQIKEQIEDHKKRIEKLEEYT-KTCMDCLKEKKQQ 455
Query: 419 NNKLLHALRNS 429
L+ + N+
Sbjct: 456 EETLVGEIENT 466
Score = 37 (18.1 bits), Expect = 1.5e-07, Sum P(3) = 1.5e-07
Identities = 15/67 (22%), Positives = 30/67 (44%)
Query: 359 TVPAYEPPHD----KIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKD 414
TV A + H ++++ ++ L NQKR Q + ++ + + L +KD
Sbjct: 262 TVKAKKKEHGMLTRQLQQTEKELKSLEALLNQKRPQYIKAKENTSHHLKKLDVAKKSIKD 321
Query: 415 MEDKNNK 421
E + +K
Sbjct: 322 SEKQCSK 328
>CGD|CAL0001080 [details] [associations]
symbol:SMC1 species:5476 "Candida albicans" [GO:0034990
"nuclear mitotic cohesin complex" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=IEA] [GO:0007064 "mitotic
sister chromatid cohesion" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0003680 "AT DNA
binding" evidence=IEA] [GO:0000217 "DNA secondary structure
binding" evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 CGD:CAL0001080
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0005694
GO:GO:0006281 GO:GO:0006310 GO:GO:0030261 GO:GO:0007062
EMBL:AACQ01000091 EMBL:AACQ01000090 eggNOG:COG1196 SUPFAM:SSF75553
KO:K06636 RefSeq:XP_715092.1 RefSeq:XP_715143.1
ProteinModelPortal:Q5A021 SMR:Q5A021 STRING:Q5A021 GeneID:3643221
GeneID:3643229 KEGG:cal:CaO19.11845 KEGG:cal:CaO19.4367
Uniprot:Q5A021
Length = 1240
Score = 121 (47.7 bits), Expect = 6.3e-09, Sum P(3) = 6.3e-09
Identities = 61/250 (24%), Positives = 107/250 (42%)
Query: 21 GNIIEIELHNFMTFD--HLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRAT 78
G +I +EL NF ++ +I S +IGPNG+GKS+++ AI+ LG ++ L R+
Sbjct: 2 GRLIGLELFNFKSYKGKSIIGFGSSYFTSIIGPNGAGKSNMMDAISFVLGVNSYHL-RSQ 60
Query: 79 SIGAYVKRGEE-----------------SGYIKISLRGDTKEEHLTIMRKIDTRNKSEWF 121
++ + RG S Y+ + D E L + R I S++
Sbjct: 61 NLKDLIYRGRRNIDTDSTTLDAIEQDPTSAYVMATYEKDDGEI-LKLKRTITASGNSDYQ 119
Query: 122 FNGKVVPKGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPV 181
NG+ V + K+ NI + + Q V A +P L + E G +
Sbjct: 120 INGQSVTMLNYSMVLKQENILIKARNFLVFQGDVETIASQNPKDLTKLIETISGSNEYIN 179
Query: 182 QHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKK-K 240
++ L E+ K + +V TLN EQ + + ++ ++ K +++KK
Sbjct: 180 EYERLKEEHEKAHELTTSVFSRKRTLNSESKQYKEQMAEQRQFEEK--IITKNDTVKKIN 237
Query: 241 LPWLKYDMKK 250
L L ++ KK
Sbjct: 238 LYKLFHNEKK 247
Score = 109 (43.4 bits), Expect = 6.3e-09, Sum P(3) = 6.3e-09
Identities = 78/359 (21%), Positives = 161/359 (44%)
Query: 651 EDEAAKLQKEREEIIN--IVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQ 708
E E K K+R + I IV +E ++ + +K+ ES++K + L + Q
Sbjct: 842 EKERLKETKDRRKSIESLIVDLED----DLAKVLTEKKKLEESLDKAEAEYEVLQTEISQ 897
Query: 709 AADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELE-FNLKQHEKLALQ 767
D Q K + I++ L + S S K + IE + + E N+ ++ K+
Sbjct: 898 FDDSMQSQLKTSKSIESDLDDSKSLV-STLVKEITQIEENLLKTDSERANVLRNCKIQ-N 955
Query: 768 ASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEM-PTTIE-ELEAAIQDNI 825
+L D + ++L + ++ I LE+ F E+ ++ ELE +Q+ I
Sbjct: 956 INLPLIDGDLDSISVGENLESSIKEVYKIELDYEMLEERFKEVFNNKLQSELEVILQNTI 1015
Query: 826 SQANSIFFLNQNI--LQEYEHRQRQIE-DLSTKQEADKKELKRFLAEIDALKEKWLPTLR 882
S + + I L+E E + R + + + ++ +++ +RF + +K++
Sbjct: 1016 SDLEKLTPNAKAIERLREVETKLRNYDKEYNVARQKERQVNERFKKVQEKRYDKFMDAFN 1075
Query: 883 NLVAQINETFSRNFQE-MAVAGE---VSLDEHESDF---DKFGILIKVK-FRQSGQLEVL 934
++ I+ + + M+ G ++L++ +S F K+ + +K FR +E+L
Sbjct: 1076 HISGCIDSIYKELTKSAMSPLGGSAYLTLEDEDSPFLSGIKYHAMPPMKRFRD---MELL 1132
Query: 935 SAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPN 993
S GGE++++ + L ++ PF V+DEI+ +D N ++ + + A PN
Sbjct: 1133 S-----GGEKTMAALALLFAIHSYQPSPFFVLDEIDAALDNANVARIGNYIKKYAG-PN 1185
Score = 76 (31.8 bits), Expect = 9.7e-06, Sum P(2) = 9.7e-06
Identities = 49/269 (18%), Positives = 118/269 (43%)
Query: 646 EQRLIEDEAAKLQKEREEIINIVQI--EKRKRREMENHINLRKRKLESIEKE--DDINTA 701
EQR E++ + + + IN+ ++ ++K ++++ I + +L+ +KE + T
Sbjct: 218 EQRQFEEKIIT-KNDTVKKINLYKLFHNEKKHNQLKDEIKSKNEELKLAKKELSNKEKTY 276
Query: 702 LAKLVDQAAD-LNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQ 760
+ + D ++ LN ++ K E ++ + E + S+ +L+
Sbjct: 277 KSIMTDYSSSVLNAKKQKQQTEAAQQKIDSTKRELIPVEANQRSLSNKINFHKLKVG-DL 335
Query: 761 HEKLALQASLHYEDCKKEVEHCRKHLSDAKRQ-AESIAF---ITPELEKEFLEMPTTI-- 814
+ +A Q + ++++ ++ D + + A ++A I+PE +KE+ E+ +
Sbjct: 336 VKDIARQKT-QVSSVERQLRDAQRMFDDFQAKIAAAVASSTNISPEAQKEYEELRSKFLA 394
Query: 815 ---EELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEAD-KKELKRFLAEI 870
ELE I ++ +S+ N+ + + + +I +L + D K +L EI
Sbjct: 395 ENGSELEEQISLLLNNKDSLNSAKSNLENQKTNAEHRIAELESIVATDLKSKLHDVSNEI 454
Query: 871 DALKEKWLPTLRNLVAQINETFSRNFQEM 899
+ + +K + A I + N +E+
Sbjct: 455 NEVLDKKSDKVEARNALIKQKDEFNHEEL 483
Score = 66 (28.3 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 53/258 (20%), Positives = 109/258 (42%)
Query: 656 KLQKER-EEI-INIVQIE----KRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQA 709
KLQ++R +++ IN++ E K + N +R ++ E E + T L K D++
Sbjct: 705 KLQEKRPKDLEINLLAEEIGALDDKLPVLRNQKTSIERIIKDRESEIEFQTGLFKGFDKS 764
Query: 710 ADLNIQQF-KYAIEIKNLLVEIVSCK----WSYAEKH--MASIEFDAKIRELEFNLKQHE 762
+ + K +I + ++ S K + EK+ + IE + ++ E
Sbjct: 765 IQEKMNEITKINGKIDKVNEKMKSSKDLIFAEFCEKYGFVNGIEDYENMHGSTLRVRAKE 824
Query: 763 KLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQ 822
+ ++ K + E ++ L + K + +SI + +LE + ++ T ++LE
Sbjct: 825 RAQFSKTISVLQNKLDFE--KERLKETKDRRKSIESLIVDLEDDLAKVLTEKKKLE---- 878
Query: 823 DNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLR 882
+++ +A + EYE Q +I ++ K K +++D K + TL
Sbjct: 879 ESLDKAEA----------EYEVLQTEISQFDDSMQSQLKTSKSIESDLDDSKSL-VSTLV 927
Query: 883 NLVAQINETFSRNFQEMA 900
+ QI E + E A
Sbjct: 928 KEITQIEENLLKTDSERA 945
Score = 46 (21.3 bits), Expect = 6.3e-09, Sum P(3) = 6.3e-09
Identities = 13/44 (29%), Positives = 28/44 (63%)
Query: 367 HDKIE---KLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQ 407
H++++ +L +++L A+Q+R +S K+K L +N TL++
Sbjct: 480 HEELKLNTRLRDVLVKLDELASQQR--ESNKQKKLRENVATLKR 521
>ZFIN|ZDB-GENE-020419-21 [details] [associations]
symbol:smc4 "structural maintenance of chromosomes
4" species:7955 "Danio rerio" [GO:0030261 "chromosome condensation"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0007062
"sister chromatid cohesion" evidence=IEA] [GO:0051276 "chromosome
organization" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006310 "DNA
recombination" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
ZFIN:ZDB-GENE-020419-21 GO:GO:0005524 GO:GO:0005634 GO:GO:0005694
GO:GO:0006281 GO:GO:0006310 GO:GO:0030261 GO:GO:0007062 KO:K06675
SUPFAM:SSF75553 CTD:10051 HOGENOM:HOG000184777 HOVERGEN:HBG106696
HSSP:Q9X0R4 EMBL:AY099521 IPI:IPI00504040 RefSeq:NP_775360.1
UniGene:Dr.77769 ProteinModelPortal:Q8JGS5 STRING:Q8JGS5
PRIDE:Q8JGS5 GeneID:192332 KEGG:dre:192332 InParanoid:Q8JGS5
NextBio:20797168 ArrayExpress:Q8JGS5 Bgee:Q8JGS5 Uniprot:Q8JGS5
Length = 1289
Score = 117 (46.2 bits), Expect = 9.4e-09, Sum P(3) = 9.4e-09
Identities = 65/322 (20%), Positives = 150/322 (46%)
Query: 673 RKRREMENHINLRKRKLESIEK-EDDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIV 731
R ++ E+ ++ ++++ EK +++ L KL +QA ++ +Q A + L E+
Sbjct: 931 RNLKKSEDGVSRLEQEISENEKLMEELTEQLKKLEEQAGEI-MQSTSSA---EKALPEV- 985
Query: 732 SCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYED-----CKKEVEHCRKHL 786
++H A ++ ++E E L Q E L+++ + + D C +++H +K
Sbjct: 986 ------QDQHRAVVQEIKALQEQEHAL-QKEFLSVRLKVEHIDTAITECHNKIKHWQKEA 1038
Query: 787 SDAKRQ------AESIAFITPELEKEFLEMPTTIEELEAAIQDNISQAN-SIFFLNQNIL 839
S AE + + P+ + + + P I+ A ++D + ++ + +
Sbjct: 1039 SKLCLHHIDGVPAEELPALNPD-QLQDIGNPDVIKNEIALLEDRCANMKPNLGAIAEFKK 1097
Query: 840 QE--YEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLVAQIN---ETFSR 894
+E Y R +++D++T++++ K+ + D K++ L +A N
Sbjct: 1098 KEELYLQRVAELDDITTQRDSFKRGCE------DLRKQR----LHEFMAGFNIITNKLKE 1147
Query: 895 NFQEMAVAGEVSLDEHESDFDKF--GILIKVKFRQSGQLEVLSAHHQSGGERSVSTILYL 952
N+Q + + G+ L+ +S D F GI+ V+ + ++ ++ SGGE+++S++ +
Sbjct: 1148 NYQMLTLGGDAELELVDS-LDPFSEGIMFSVRPPKKSWKKI---YNLSGGEKTLSSLALV 1203
Query: 953 VSLQDLTNCPFRVVDEINQGMD 974
+L P +DEI+ +D
Sbjct: 1204 FALHHFKPTPLYFMDEIDAALD 1225
Score = 102 (41.0 bits), Expect = 9.4e-09, Sum P(3) = 9.4e-09
Identities = 54/237 (22%), Positives = 102/237 (43%)
Query: 23 IIEIELHNFMTF-DHLICKP-GSRLNLVIGPNGSGKSSLVCAIALALGGDTQLL-GRATS 79
I I NF ++ I P R + +IGPNGSGKS+++ ++ G Q + + S
Sbjct: 83 ITHIVNRNFKSYAGEQILGPFHKRFSCIIGPNGSGKSNVIDSMLFVFGYRAQKIRSKKLS 142
Query: 80 IGAYVKRGE---ESGYIKISLR------GDT----KEEHLTIMRKIDTRNKSEWFFNGKV 126
+ + G +S +++ + GD + + R N S ++ N K
Sbjct: 143 VLIHSSDGHPDIQSCTVEVHFQKIIDKEGDDYDVIPDSSFYVARTAGKDNSSAYYINTKK 202
Query: 127 VPKGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCAL 186
+V + + I +++ + Q V + A + P E E + + + C L
Sbjct: 203 ATFKDVGTLLRSHGIDLDHNRFLILQGEVEQIAMMKPKGQTEHDEGMLEYLEDIIGSCRL 262
Query: 187 VEKSSKL-KTIECTVKRNGDTLNQLKALNVEQEKD-VERVRQRA-ELLEKVESMKKK 240
E + L + +E ++ G+ LN++K VE+EK +E + +A + L + KK
Sbjct: 263 KEPINILCRRVEALNEQRGEKLNRVKM--VEKEKSALEGEKNKAVDFLNLENDIFKK 317
Score = 98 (39.6 bits), Expect = 4.1e-05, Sum P(3) = 4.1e-05
Identities = 65/268 (24%), Positives = 120/268 (44%)
Query: 643 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKED-DINTA 701
+Q + + + D++++L +E + ++ ++K ++ +I +K K ++ +D ++
Sbjct: 343 IQEDTKDLSDKSSQLTEEMKSKNEDLKAVEKKLTKLTKYIESQKEKFTQLDLQDVEVREK 402
Query: 702 LAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFN-LKQ 760
L + L Q K + L E+ S +EK + E A+ ELE L +
Sbjct: 403 LKHTKSKTKKLQKQLQKD----QEKLEEVRGVPAS-SEKIIT--EASAQKEELEKKKLLE 455
Query: 761 HEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAA 820
+KLA E K+E K L D K + E EL K E + ++ ++
Sbjct: 456 EQKLAEVM----ESLKEET----KGLQDDKEKKEKELL---ELSKSVNETRSRMDVAQSE 504
Query: 821 IQDNISQANS-IFFLNQ--NILQE----YEHRQRQIEDLSTKQEADKKELKRFLAEIDAL 873
+ +SQ N+ I LNQ + LQE R+ I+DL K A +++LK+ E++ +
Sbjct: 505 LDIYLSQHNTAINQLNQAKSALQETVDTLRERRAAIKDLQVKIPAQEEQLKKDERELEQI 564
Query: 874 KEKWLPT------LRNLVAQINETFSRN 895
E+ T +R VA+ + S N
Sbjct: 565 SEQDKQTRAQVGDMRQKVAEAKSSLSSN 592
Score = 74 (31.1 bits), Expect = 5.9e-06, Sum P(3) = 5.9e-06
Identities = 73/336 (21%), Positives = 135/336 (40%)
Query: 103 EEHLTIM-RKIDTRN--KSEWFFNGKVVPKGE-VLEITKRFNIQVNNLTQ--FLPQDRVC 156
+E + I+ R+++ N + E K+V K + LE K + NL F ++ +C
Sbjct: 263 KEPINILCRRVEALNEQRGEKLNRVKMVEKEKSALEGEKNKAVDFLNLENDIFKKRNLLC 322
Query: 157 EFA--KLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKL----KTIECTVKRNGDTLNQL 210
F L ++E EK Q+ L +KSS+L K+ +K L +L
Sbjct: 323 HFYVHDLQSRVSVKEAEKQ----QIQEDTKDLSDKSSQLTEEMKSKNEDLKAVEKKLTKL 378
Query: 211 -KALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAEYIXXXXXXXXXXXXXXX 269
K + ++EK + Q E+ EK++ K K L+ ++K +
Sbjct: 379 TKYIESQKEKFTQLDLQDVEVREKLKHTKSKTKKLQKQLQKDQ-----EKLEEVRGVPAS 433
Query: 270 XXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENSKRRMDFLEKVDQGVQVQGKYKXX 329
+ E S E +++K + + ++ + E +K D EK ++ + K
Sbjct: 434 SEKIITEASAQKEELEKKKLLEEQKLAEVMESLKEETKGLQDDKEKKEKELLELSKSVNE 493
Query: 330 XXXXXXXXXXXXXILKARXXXXXXXXXXQTVPAYEPPHDKIEKLGSQILELGVQ--ANQK 387
I ++ Q A + D + + + I +L V+ A ++
Sbjct: 494 TRSRMDVAQSELDIYLSQHNTAINQLN-QAKSALQETVDTLRERRAAIKDLQVKIPAQEE 552
Query: 388 RLQKSEKE--KILNQNKLTLRQCSD-RLKDMEDKNN 420
+L+K E+E +I Q+K T Q D R K E K++
Sbjct: 553 QLKKDERELEQISEQDKQTRAQVGDMRQKVAEAKSS 588
Score = 56 (24.8 bits), Expect = 9.4e-09, Sum P(3) = 9.4e-09
Identities = 17/53 (32%), Positives = 26/53 (49%)
Query: 386 QKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAENIFEAY 438
Q++L K E LN+ L+ C R +E+K +K LR+ +N E Y
Sbjct: 772 QEQLDKMESA--LNKEVTQLQDCQKRKNQLEEKVHKARCELRDM--KNTLEKY 820
Score = 39 (18.8 bits), Expect = 4.7e-07, Sum P(3) = 4.7e-07
Identities = 6/27 (22%), Positives = 16/27 (59%)
Query: 406 RQCSDRLKDMEDKNNKLLHALRNSGAE 432
+Q + KD+ DK+++L +++ +
Sbjct: 341 QQIQEDTKDLSDKSSQLTEEMKSKNED 367
Score = 39 (18.8 bits), Expect = 4.7e-07, Sum P(3) = 4.7e-07
Identities = 9/34 (26%), Positives = 19/34 (55%)
Query: 389 LQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKL 422
++++EK++I K + S ++M+ KN L
Sbjct: 335 VKEAEKQQIQEDTKDLSDKSSQLTEEMKSKNEDL 368
>TIGR_CMR|BA_3986 [details] [associations]
symbol:BA_3986 "chromosome segregation SMC protein"
species:198094 "Bacillus anthracis str. Ames" [GO:0005524 "ATP
binding" evidence=ISS] [GO:0007059 "chromosome segregation"
evidence=ISS] InterPro:IPR024704 HAMAP:MF_01894 InterPro:IPR010935
InterPro:IPR011890 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0005737
GO:GO:0005694 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003677 GO:GO:0006260 GO:GO:0006281
GO:GO:0006310 GO:GO:0030261 GO:GO:0007062 SUPFAM:SSF75553
OMA:CQNGKIP HOGENOM:HOG000036392 KO:K03529 TIGRFAMs:TIGR02168
HSSP:Q9X0R4 RefSeq:NP_846228.1 RefSeq:YP_020625.1
RefSeq:YP_029950.1 ProteinModelPortal:Q81WI9 IntAct:Q81WI9
DNASU:1086762 EnsemblBacteria:EBBACT00000012710
EnsemblBacteria:EBBACT00000015269 EnsemblBacteria:EBBACT00000024406
GeneID:1086762 GeneID:2817444 GeneID:2848221 KEGG:ban:BA_3986
KEGG:bar:GBAA_3986 KEGG:bat:BAS3699 ProtClustDB:CLSK873325
BioCyc:BANT260799:GJAJ-3757-MONOMER
BioCyc:BANT261594:GJ7F-3874-MONOMER Uniprot:Q81WI9
Length = 1189
Score = 134 (52.2 bits), Expect = 9.9e-09, Sum P(3) = 9.9e-09
Identities = 84/358 (23%), Positives = 158/358 (44%)
Query: 656 KLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKE-DDINTALAKLVDQAADLNI 714
K+QKE E+ ++ EK++R + N +K K+E + KE ++ + L K + A L
Sbjct: 808 KVQKEMTEL-KVLAAEKQQR--LSN----QKEKVERLTKEKEETDATLVKTKEDLAFLKQ 860
Query: 715 QQFKYAI---EIKNLLVEIVSCKWSYAE----KHMASIEFDAKIRELEFNLKQ---HEKL 764
+ + +I N++ + + +E + + ++ +LE NLK+ K
Sbjct: 861 EMTSNSSGEEQITNMIEKKAYDRNQTSELIRSRREQRVSLQERVEQLERNLKETTGKHKY 920
Query: 765 ALQASLHYEDCK-----KEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEA 819
L+ L ++ K E+E+ +HL R+ +I+F +L K + MP +
Sbjct: 921 ILEM-LKDQEVKINRLDVELENRLQHL----RETYTISFEAAKL-KYTMMMPAEDARKKV 974
Query: 820 A-IQDNISQANSIFFLNQNILQEYEH-RQRQIEDLSTKQEAD--KKELKRFLAEIDA-LK 874
I+ +I + ++ N + EYE +R L K + + K L + + E+D +K
Sbjct: 975 KLIKLSIEELGTV---NLGAIDEYERVAERHTFLLEQKDDLEEAKTTLHQLITEMDEEMK 1031
Query: 875 EKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLD-EHESDFDKFGILIKVKFRQSGQLEV 933
+++ T + + FS E+ G L + D GI I V +L+
Sbjct: 1032 KRFSTTFEGIRMEFQSVFS----ELFGGGRADLVMTNPEDLLNTGIDI-VAQPPGKKLQN 1086
Query: 934 LSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQ 991
L SGGER+++ I L + + PF V+DE+ +D N + Q L + + +
Sbjct: 1087 LGL--LSGGERALTAIALLFGILKVRPVPFCVLDEVEAALDEANVARFAQYLKKFSDE 1142
Score = 84 (34.6 bits), Expect = 9.9e-09, Sum P(3) = 9.9e-09
Identities = 48/228 (21%), Positives = 101/228 (44%)
Query: 26 IELHNFMTFDHLICK---PGSRLNLVIGPNGSGKSSLVCAIALALGGDT--QLLG-RATS 79
+E+ F +F + PG + V+GPNGSGKS++ AI LG + L G +
Sbjct: 6 LEIAGFKSFAERVSVDFVPG--VTSVVGPNGSGKSNITDAIRWVLGEQSAKSLRGAKMED 63
Query: 80 I---GAYVKRGEESGYIKISLRGDTKE---EH--LTIMRKIDTRNKSEWFFNGKVVPKGE 131
I G+ +R + I+L + + E+ + + R++ S+++ N + +
Sbjct: 64 IIFAGSDTRRAVNVAEVTITLNNEDQRLPIEYNEVCVTRRVSRSGDSDFYINKQSCRLKD 123
Query: 132 VLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSS 191
++++ + + Q +V E + E+A G + ++ + S
Sbjct: 124 IIDLFMDSGMG-REAFSIISQGKVEEILSSKSEERRGVFEEAAGVLKYKLRK---KKAES 179
Query: 192 KLKTIECTVKRNGDTLNQLKAL--NVEQEKDVER-VRQRAELLEKVES 236
KL + + R D +++L + +E++ + + ++ E LEKVE+
Sbjct: 180 KLADTQENLNRVQDIIHELSSQVEPLERQASIAKDYLEKKEELEKVEA 227
Score = 55 (24.4 bits), Expect = 9.9e-09, Sum P(3) = 9.9e-09
Identities = 21/84 (25%), Positives = 40/84 (47%)
Query: 391 KSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAENIFEAYCWLQQHRHELNK 450
K K +L + + L + +++L DME+K KL + ++ + + I E +++ R +
Sbjct: 667 KQAKSSLLGRQR-ELEEWTNKLTDMEEKTTKLENFVK-AVKQEIQEKEVQIRELRKSVEA 724
Query: 451 EAYGPVLLEVNVSNRAHANYLEDH 474
E L + NR LE+H
Sbjct: 725 ERVDEQKLREEI-NRLE---LEEH 744
Score = 49 (22.3 bits), Expect = 3.1e-05, Sum P(3) = 3.1e-05
Identities = 15/63 (23%), Positives = 32/63 (50%)
Query: 191 SKLKTIECTVKRNGDTLNQLKALNVEQ-EKDVERVRQRAELLEKVESMKKKLPWLKYDMK 249
++L IE K+ +L N + E +E ++ +L+E E +K+K+ + +++
Sbjct: 397 NELSMIEEQSKQQNSKNERLDEENAKYVEMRMEITAKKTKLVESYEQVKEKVAGILSNIQ 456
Query: 250 KAE 252
K E
Sbjct: 457 KTE 459
Score = 46 (21.3 bits), Expect = 7.9e-08, Sum P(3) = 7.9e-08
Identities = 15/58 (25%), Positives = 27/58 (46%)
Query: 360 VPAYEPPHDKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMED 417
V +YE +K+ + S I + + + Q SE E L Q ++Q R + +E+
Sbjct: 438 VESYEQVKEKVAGILSNIQKTEAALGKCKAQYSENETKLYQAYQFVQQARSRKEMLEE 495
Score = 43 (20.2 bits), Expect = 1.6e-07, Sum P(3) = 1.6e-07
Identities = 13/50 (26%), Positives = 27/50 (54%)
Query: 369 KIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLK--DME 416
+I++ QI EL +R+ + + + +N+ +L + +DRL D+E
Sbjct: 707 EIQEKEVQIRELRKSVEAERVDEQKLREEINRLELEEHRINDRLSIYDLE 756
Score = 43 (20.2 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 28/119 (23%), Positives = 52/119 (43%)
Query: 129 KGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVG-DPQLPVQHCALV 187
KG+ +E+ + N L+ Q + + +K +L EE K V ++ + LV
Sbjct: 382 KGDYIELLNQQASHRNELSMIEEQSKQ-QNSKNE--RLDEENAKYVEMRMEITAKKTKLV 438
Query: 188 EKSSKLKT----IECTVKRNGDTLNQLKALNVEQEKD-------VERVRQRAELLEKVE 235
E ++K I +++ L + KA E E V++ R R E+LE+++
Sbjct: 439 ESYEQVKEKVAGILSNIQKTEAALGKCKAQYSENETKLYQAYQFVQQARSRKEMLEEMQ 497
>UNIPROTKB|G3X7C0 [details] [associations]
symbol:SMC1A "Structural maintenance of chromosomes
protein" species:9913 "Bos taurus" [GO:0005634 "nucleus"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0042770 "signal transduction in response to DNA
damage" evidence=IEA] [GO:0036033 "mediator complex binding"
evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] [GO:0030893 "meiotic cohesin
complex" evidence=IEA] [GO:0019827 "stem cell maintenance"
evidence=IEA] [GO:0009314 "response to radiation" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0000075
"cell cycle checkpoint" evidence=IEA] [GO:0030261 "chromosome
condensation" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0000776 GO:GO:0006281 GO:GO:0003682 GO:GO:0042770
GO:GO:0006310 GO:GO:0030261 GO:GO:0009314 GO:GO:0032876
GO:GO:0000075 GO:GO:0007062 SUPFAM:SSF75553 GO:GO:0030893
OMA:NALVCET GeneTree:ENSGT00580000081569 EMBL:DAAA02073280
EMBL:DAAA02073281 Ensembl:ENSBTAT00000023619 Uniprot:G3X7C0
Length = 1232
Score = 122 (48.0 bits), Expect = 1.6e-08, Sum P(3) = 1.6e-08
Identities = 62/222 (27%), Positives = 100/222 (45%)
Query: 26 IELHNFMTFD-HLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI---- 80
IE+ NF ++ I P R +IGPNGSGKS+L+ AI+ LG T L R ++
Sbjct: 7 IEIENFKSYKGRQIIGPFQRFTAIIGPNGSGKSNLMDAISFVLGEKTSNL-RVKTLRDLI 65
Query: 81 -GAYV-KRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKR 138
GA V K ++ + + E+ T R I SE+ N KVV E E ++
Sbjct: 66 HGAPVGKPAANRAFVSMVYSEEGAEDR-TFARVI-VGGSSEYKINNKVVQLHEYSEELEK 123
Query: 139 FNIQVNNLTQFLPQDRVCEFAKLSPVK---LLEETEKAVGDPQLPVQHCALVEKSSKLKT 195
I + + Q V A +P + L EE ++ G+ L ++ K K
Sbjct: 124 LGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRS-GE---------LAQEYDKRKK 173
Query: 196 IECTVKRNGDT-LNQLKALNVEQE-KDVERVRQRAELLEKVE 235
E VK DT N + N+ E K+ ++ ++ A+ ++++
Sbjct: 174 -EM-VKAEEDTQFNYHRKKNIAAERKEAKQEKEEADRYQRLK 213
Score = 107 (42.7 bits), Expect = 1.6e-08, Sum P(3) = 1.6e-08
Identities = 76/383 (19%), Positives = 163/383 (42%)
Query: 651 EDEAAKLQKEREEIINIV-----QIEKRKRREM--ENHINLRKRKLESIEKE-DDINTAL 702
E+E KL+KE + + I+ Q++ K + + ++ +N + ++E I K+ N +
Sbjct: 846 ENEIEKLKKEEQRHMKIIDETMAQLQDLKNQHLAKKSEVNDKNHEMEEIRKKLGGANKEM 905
Query: 703 AKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHE 762
L + + + + + NLL +CK + ++ D I + E + + +
Sbjct: 906 THLQKEVTAIETKLEQKRSDRHNLLQ---ACKMQDIKLPLSKGTMD-DISQEEGSSQGED 961
Query: 763 KLA---LQASLHYEDCKKEVEH--CRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEEL 817
++ ++++ + E+++ + L DA+ + E I L+++ E + ++ +
Sbjct: 962 SVSGSQRTSNIYAREALIEIDYGDLCEDLKDAQAE-EEIKQEMNTLQQKLNEQQSVLQRI 1020
Query: 818 EAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKW 877
A + + S+ Q E+E +++ + E KKE RF D +
Sbjct: 1021 AAPNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKE--RF----DRFNACF 1074
Query: 878 LPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVK-FRQSGQLEVLSA 936
N + +I + SRN A G + +E D + + K FR L
Sbjct: 1075 ESVATN-IDEIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLS---- 1129
Query: 937 HHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTPQ 996
GE++V+ + L ++ PF V+DEI+ +D N K+ ++ S N Q
Sbjct: 1130 -----GEKTVAALALLFAIHSYKPAPFFVLDEIDAALDNTNIGKV-ANYIKEQSTCNF-Q 1182
Query: 997 CFLLTPKLLPDLEYSEACSILNI 1019
+++ L + Y++A S++ +
Sbjct: 1183 AIVIS---LKEEFYTKAESLIGV 1202
Score = 98 (39.6 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 57/271 (21%), Positives = 118/271 (43%)
Query: 654 AAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKE-DDINTALAKLVDQAADL 712
AA+ ++ ++E + ++ K + + L+ KL E E + +N LA +
Sbjct: 193 AAERKEAKQEKEEADRYQRLKDEVVRAQVQLQLFKLYHNEVEIEKLNKELASKNKEIEKD 252
Query: 713 NIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHY 772
+ K E+K E+ + IE + K ++ E N K+ + + + + +
Sbjct: 253 KKRMDKVEDELKEKKKELGKMM-----REQQQIEKEIKEKDSELNQKRPQYIKAKENTSH 307
Query: 773 EDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIF 832
+ K++E +K L +A++ + ELEKE L + +E E +++
Sbjct: 308 KI--KKLEAAKKSLQNAQKHYKKRKGDMDELEKEMLSVEKARQEFEERMEEESQSQGRDL 365
Query: 833 FLNQNILQEYEHRQRQIEDLSTKQEADKKELKRF----LAEIDAL---KEKWLPT---LR 882
L +N +++Y HR + E+ S + +EL++F A+ D L + K + T ++
Sbjct: 366 TLEENQVKKY-HRLK--EEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAKIK 422
Query: 883 NLVAQINETFSR--NFQEMAVAGEVSLDEHE 911
+ +I E R +E + SL+E +
Sbjct: 423 QKLREIEENQKRIEKLEEYITTSKQSLEEQK 453
Score = 90 (36.7 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 52/272 (19%), Positives = 123/272 (45%)
Query: 651 EDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAA 710
E E KL KE ++ +K++ ++E+ + +K++L + +E ++ ++ +
Sbjct: 232 EVEIEKLNKELASKNKEIEKDKKRMDKVEDELKEKKKELGKMMREQQ--QIEKEIKEKDS 289
Query: 711 DLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQ-AS 769
+LN ++ +Y +N +I K A+K + + + K R+ + + + E L+++ A
Sbjct: 290 ELNQKRPQYIKAKENTSHKIK--KLEAAKKSLQNAQKHYKKRKGDMDELEKEMLSVEKAR 347
Query: 770 LHYEDCKKEVEHCR-KHLSDAKRQAESIAFITPELEKEFLEMPTTIEEL---EAAIQDNI 825
+E+ +E + + L+ + Q + + E K + +E+ + A QD +
Sbjct: 348 QEFEERMEEESQSQGRDLTLEENQVKKYHRLKEEASKRAATLAQELEKFNRDQKADQDRL 407
Query: 826 S-----QANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPT 880
+ + + Q L+E E Q++IE L K+ L+ L E+ +
Sbjct: 408 DLEERKKVETEAKIKQK-LREIEENQKRIEKLEEYITTSKQSLEEQKKLEGELTEE-VEM 465
Query: 881 LRNLVAQINETFSRNFQEMAVAGEVSLDEHES 912
+ + +IN+ ++ +++ G+ +D ES
Sbjct: 466 AKRRIDEINKELNQVMEQL---GDARIDRQES 494
Score = 86 (35.3 bits), Expect = 7.1e-07, Sum P(2) = 7.1e-07
Identities = 55/261 (21%), Positives = 118/261 (45%)
Query: 650 IEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQA 709
+EDE + +KE +++ Q +++ +E ++ +N +KR + I+ +++ + + KL
Sbjct: 259 VEDELKEKKKELGKMMREQQQIEKEIKEKDSELN-QKRP-QYIKAKENTSHKIKKLEAAK 316
Query: 710 ADLNIQQFKYAI------EIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFN-LKQHE 762
L Q Y E++ ++ + + + E+ + + LE N +K++
Sbjct: 317 KSLQNAQKHYKKRKGDMDELEKEMLSVEKARQEFEERMEEESQSQGRDLTLEENQVKKYH 376
Query: 763 KLALQASLHYEDCKKEVEHC-RKHLSDAKR-------QAESIAFITPELEKEFLEMPTTI 814
+L +AS +E+E R +D R + E+ A I +L +E E I
Sbjct: 377 RLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAKIKQKL-REIEENQKRI 435
Query: 815 EELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEI-DAL 873
E+LE I + L + +E E +R+I++++ KEL + + ++ DA
Sbjct: 436 EKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEIN-------KELNQVMEQLGDAR 488
Query: 874 KEKWLPTLRNLVAQINETFSR 894
++ + + A+I E+ R
Sbjct: 489 IDRQESSRQQRKAEIMESIKR 509
Score = 70 (29.7 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 67/318 (21%), Positives = 129/318 (40%)
Query: 648 RLIEDEAAKLQKEREEIINIVQ-IEKRKRREME--NHINLRKRKLESIEKEDDINTALAK 704
R IE+ +++K E I Q +E++K+ E E + + KR+++ I KE +N + +
Sbjct: 426 REIEENQKRIEKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEINKE--LNQVMEQ 483
Query: 705 LVDQAADL---NIQQFKYAI--EIKNL--------LVEI---VSCKWSYAE-----KHMA 743
L D D + QQ K I IK L L+++ K+ A K+M
Sbjct: 484 LGDARIDRQESSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGKNMD 543
Query: 744 SIEFDAKI--RE-LEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFIT 800
+I D++ R+ +++ +Q + L Y + K E R+ L AK + I +
Sbjct: 544 AIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRE-LKGAKLVIDVIRYEP 602
Query: 801 PELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADK 860
P ++K L+ A + DN+ A I F H+ ++ ++
Sbjct: 603 PHIKKA-LQYACG----NALVCDNVEDARRIAFGGHQ-----RHKTVALDGTLFQKSG-- 650
Query: 861 KELKRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGIL 920
+ +++ A +W + + + E + +E A + + G+
Sbjct: 651 -VISGGASDLKAKARRWDEKAVDKLKEKKERLTEELKEQMKAKRKEAELRQVQSQAHGLQ 709
Query: 921 IKVKFRQSGQLEVLSAHH 938
+++K+ QS LE H
Sbjct: 710 MRLKYSQS-DLEQTKTRH 726
Score = 68 (29.0 bits), Expect = 0.00023, Sum P(3) = 0.00023
Identities = 37/174 (21%), Positives = 78/174 (44%)
Query: 750 KIRELEFNLKQHEKLALQ-ASL--HYEDCKKEVEHCRKHLSDAKRQAESIAF-ITPELEK 805
K R L NL++ KL + A+ D K+ ++ + + D K + + + E +
Sbjct: 723 KTRHLALNLQEKSKLESELANFGPRINDIKRIIQSREREMKDLKEKMNQVEDEVFEEFCR 782
Query: 806 EF-LEMPTTIEELEAAIQDNISQANSIFFLNQNILQ--EYEHRQRQIEDLSTKQEADKKE 862
E + EE + Q+ I++ + F NQ + + + Q+++ K ++
Sbjct: 783 EIGVRNIREFEEEKVKRQNEIAKKR-LEFENQKTRLGIQLDFEKNQLKEDQDKVHMWEQT 841
Query: 863 LKRFLAEIDALK---EKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESD 913
+K+ EI+ LK ++ + + +AQ+ + +N Q +A EV+ HE +
Sbjct: 842 VKKDENEIEKLKKEEQRHMKIIDETMAQLQDL--KN-QHLAKKSEVNDKNHEME 892
Score = 43 (20.2 bits), Expect = 1.6e-08, Sum P(3) = 1.6e-08
Identities = 18/75 (24%), Positives = 39/75 (52%)
Query: 379 ELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKL---LHALRNSGAENIF 435
E+GV + +++ E+EK+ QN++ + RL + E++ +L L +N E+
Sbjct: 783 EIGV----RNIREFEEEKVKRQNEIAKK----RL-EFENQKTRLGIQLDFEKNQLKEDQD 833
Query: 436 EAYCWLQQHRHELNK 450
+ + W Q + + N+
Sbjct: 834 KVHMWEQTVKKDENE 848
Score = 40 (19.1 bits), Expect = 3.1e-08, Sum P(3) = 3.1e-08
Identities = 18/70 (25%), Positives = 32/70 (45%)
Query: 489 GDRDFLAKNLKPFDVPILNYVSNESSRKEPFQISEEMRALGISARLDQVFDAPHAVKEVL 548
G D AK + +D ++ + + R ++ E+M+A A L QV H ++ L
Sbjct: 655 GASDLKAK-ARRWDEKAVDKLKEKKERLTE-ELKEQMKAKRKEAELRQVQSQAHGLQMRL 712
Query: 549 -ISQFGLDSS 557
SQ L+ +
Sbjct: 713 KYSQSDLEQT 722
Score = 39 (18.8 bits), Expect = 3.9e-08, Sum P(3) = 3.9e-08
Identities = 16/73 (21%), Positives = 34/73 (46%)
Query: 370 IEKLGSQILELGVQANQKRLQKSEKEKI---LNQNKLTLRQCSDRLKDMEDKNNKLLHAL 426
+E+ ++ L L +Q K +SE +N K ++ +KD+++K N++
Sbjct: 719 LEQTKTRHLALNLQEKSKL--ESELANFGPRINDIKRIIQSREREMKDLKEKMNQV---- 772
Query: 427 RNSGAENIFEAYC 439
+ +FE +C
Sbjct: 773 ----EDEVFEEFC 781
Score = 37 (18.1 bits), Expect = 6.2e-08, Sum P(3) = 6.2e-08
Identities = 11/52 (21%), Positives = 29/52 (55%)
Query: 375 SQILELGVQANQKRLQKSEKEKILNQNKLTLRQCS---DRLKDMEDKNNKLL 423
+Q LG+Q + ++ Q E + ++ + T+++ ++LK E ++ K++
Sbjct: 812 NQKTRLGIQLDFEKNQLKEDQDKVHMWEQTVKKDENEIEKLKKEEQRHMKII 863
>UNIPROTKB|Q9ERA5 [details] [associations]
symbol:SMC4 "Structural maintenance of chromosomes protein
4" species:47230 "Microtus arvalis" [GO:0007076 "mitotic chromosome
condensation" evidence=ISS] [GO:0046982 "protein heterodimerization
activity" evidence=ISS] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0005694 GO:GO:0051301 GO:GO:0006281 GO:GO:0006310
GO:GO:0046982 GO:GO:0007076 GO:GO:0007062 SUPFAM:SSF75553
HOVERGEN:HBG106696 EMBL:AJ299713 EMBL:AJ299717
ProteinModelPortal:Q9ERA5 Uniprot:Q9ERA5
Length = 1243
Score = 121 (47.7 bits), Expect = 2.0e-08, Sum P(3) = 2.0e-08
Identities = 61/303 (20%), Positives = 135/303 (44%)
Query: 686 KRKLESIEKE-DDINTALAKLVDQAADLNIQQFKYAIEI--------KNLLVEIVSCKWS 736
+++++ EKE +D+ L + D+A ++ I++ A E +NLL E+ + +
Sbjct: 900 EKEIKDTEKETNDLKAELKAIEDKAEEV-IKKTNAAEESLPEIQKEHRNLLQELKVIQEN 958
Query: 737 YAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYEDCKKEVEHCRKH-LSDAKRQAES 795
++ K+ +++ ++ +H + + Y +KE+ + H + D E+
Sbjct: 959 EHALQKDALSIKLKLEQIDGHIAEHN-----SKIKY--WQKEISKIKLHPIED--NPVET 1009
Query: 796 IAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTK 855
++ ++PE + E ++ P +I A ++ + N + EY+ ++ L
Sbjct: 1010 VSVLSPE-DLEAIKNPDSITNQIAILEAQCHEMKP----NLGAIAEYKKKEELY--LQRV 1062
Query: 856 QEADK--KELKRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESD 913
E DK E F + L+++ L I N+Q + + G+ L+ +S
Sbjct: 1063 AELDKITSERDNFRQAYEDLRKQRLNEFMAGFYIITNKLKENYQMLTLGGDAELELVDS- 1121
Query: 914 FDKF--GILIKVKFRQSGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQ 971
D F GI+ V+ + ++ + SGGE+++S++ + +L P +DEI+
Sbjct: 1122 LDPFSEGIMFSVRPPKKSWKKIFNL---SGGEKTLSSLALVFALHHYKPTPLYFMDEIDA 1178
Query: 972 GMD 974
+D
Sbjct: 1179 ALD 1181
Score = 104 (41.7 bits), Expect = 2.0e-08, Sum P(3) = 2.0e-08
Identities = 52/216 (24%), Positives = 95/216 (43%)
Query: 44 RLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSIGAYVKRGEESGYIK--------- 94
R + +IGPNGSGKS+++ ++ G Q + R+ + + +E I+
Sbjct: 62 RFSCIIGPNGSGKSNVIDSMLFVFGYRAQKI-RSKKLSVLIHNSDEHKDIQSCTVEVHFQ 120
Query: 95 --ISLRGDTKE----EHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQ 148
I GD E + + R N S + +GK +V + + I +++
Sbjct: 121 KIIDKEGDDYEVIPNSNFCVSRTAYRDNTSVYHISGKKRTFKDVGNLLRSHGIDLDHNRF 180
Query: 149 FLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKL--KTIECTVKRNGDT 206
+ Q V + A + P K E ++ + + + C + + K+ + +E + G+
Sbjct: 181 LILQGEVEQIAMMKP-KGQTEHDEGMLEYLEDIIGCGRLNEPIKVLCRRVEILNENRGEK 239
Query: 207 LNQLKALNVEQEKD-VERVRQRA-ELLEKVESMKKK 240
LN++K VE+EKD VE + A E L + M KK
Sbjct: 240 LNRVKM--VEKEKDAVEGEKNIAIEFLTLEKEMFKK 273
Score = 90 (36.7 bits), Expect = 4.5e-05, Sum P(3) = 4.5e-05
Identities = 35/183 (19%), Positives = 85/183 (46%)
Query: 651 EDEAAKLQ-KEREEIINIVQIEKRKRREMENHINLRKRKLESI-EKEDDINTALAKLVDQ 708
++E +Q KE E + +K+K++ +E +++ K++ +++ EK + + +L D
Sbjct: 786 QEEYLTVQIKELEANVLTTAPDKKKQKLLEENVSAFKKEYDAVAEKAGKVEAEVKRLHDT 845
Query: 709 AADLNIQQFKYAIEIKNLL-VEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQ 767
++N ++ K +++ ++ C + + +A D + + + ++ + EK
Sbjct: 846 IIEINNRKLKAQQNKLDMINKQLDECASAITKAQVAIKTADRNLIKAQDSVVRTEKEIKD 905
Query: 768 ASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKE---FLEMPTTIEELEAAIQ-D 823
D K E++ + ++ + PE++KE L+ I+E E A+Q D
Sbjct: 906 TEKETNDLKAELKAIEDKAEEVIKKTNAAEESLPEIQKEHRNLLQELKVIQENEHALQKD 965
Query: 824 NIS 826
+S
Sbjct: 966 ALS 968
Score = 77 (32.2 bits), Expect = 0.00055, Sum P(3) = 0.00055
Identities = 49/277 (17%), Positives = 117/277 (42%)
Query: 646 EQRLIEDEAAKLQKEREEIINIV-QIEKRKRREMENHINLRKRKLESIEKEDDINTALAK 704
+Q+L+E+ + +KE + + ++E +R + I + RKL++ + + D+ + K
Sbjct: 810 KQKLLEENVSAFKKEYDAVAEKAGKVEAEVKRLHDTIIEINNRKLKAQQNKLDM---INK 866
Query: 705 LVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKL 764
+D+ A K + IK ++ + S + + + +L+ LK E
Sbjct: 867 QLDECASAIT---KAQVAIKTADRNLIKAQDSVVRTEKEIKDTEKETNDLKAELKAIEDK 923
Query: 765 ALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDN 824
A + ++ + +K + ++ + I L+K+ L + +E+++ I ++
Sbjct: 924 AEEVIKKTNAAEESLPEIQKEHRNLLQELKVIQENEHALQKDALSIKLKLEQIDGHIAEH 983
Query: 825 ISQANSIFFLNQNILQEYEH--RQRQIEDLSTKQEADKKELKR--FLAEIDALKEKWLPT 880
S+ I + + I + H +E +S D + +K + A+ E
Sbjct: 984 NSK---IKYWQKEISKIKLHPIEDNPVETVSVLSPEDLEAIKNPDSITNQIAILEAQCHE 1040
Query: 881 LRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKF 917
++ + I E + + +E+ + LD+ S+ D F
Sbjct: 1041 MKPNLGAIAE-YKKK-EELYLQRVAELDKITSERDNF 1075
Score = 68 (29.0 bits), Expect = 7.8e-05, Sum P(3) = 7.8e-05
Identities = 50/236 (21%), Positives = 94/236 (39%)
Query: 99 GDTKEEHLTIMRKID--TRNKSEWFFNGKVVPKG-EVLEITKRFNIQVNNLTQ--FLPQD 153
G E + R+++ N+ E K+V K + +E K I+ L + F ++
Sbjct: 216 GRLNEPIKVLCRRVEILNENRGEKLNRVKMVEKEKDAVEGEKNIAIEFLTLEKEMFKKKN 275
Query: 154 RVCEFAKLSPVKLLEET----EKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQ 209
VC++ K ++E EK D + + ++ S+++K VK L++
Sbjct: 276 HVCQYYIYDLQKRIDEMKTQKEKIHEDTKEITEKSNML--SNEMKAKNSAVKDIEKKLHK 333
Query: 210 L-KALNVEQEK----DVERVRQRAELLEKVESMKKKLPWLKYDMKKAEYIXXXXXXXXXX 264
K + +EK D+E V+ R +L KK L+ D +K E +
Sbjct: 334 ATKFIEENKEKFRQLDLEDVQVREKLKHATSKAKKLEKQLQKDKEKVEELKSIPAKSKTI 393
Query: 265 XXXXXXXNTLHEFSKPIEGKKQEKAI--LDGDCKKLSSLINENSKRRMDFLEKVDQ 318
++ E K E KK ++ + L + + L + K M F + V++
Sbjct: 394 INETTTKSSSLEKEKEKEEKKLKEVMDSLKQETQGLQKEKEDQEKELMGFNKSVNE 449
Score = 46 (21.3 bits), Expect = 2.0e-08, Sum P(3) = 2.0e-08
Identities = 23/105 (21%), Positives = 49/105 (46%)
Query: 364 EPPHDKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLL 423
E +++ K+ SQ+ Q + K+ ++ +++K+ ++ ++ + S+R +M + K
Sbjct: 725 EISEEEVNKMESQL-----QKHSKQARRIQEQKVQHEERVVKLRHSER--EMRNTLEKFA 777
Query: 424 HALRNSGAENIFEAYCWLQQHRHELNKEAYGP-----VLLEVNVS 463
+++ + E Y +Q E N P LLE NVS
Sbjct: 778 ASIQGLSDQ---EEYLTVQIKELEANVLTTAPDKKKQKLLEENVS 819
Score = 44 (20.5 bits), Expect = 3.2e-08, Sum P(3) = 3.2e-08
Identities = 28/161 (17%), Positives = 67/161 (41%)
Query: 274 LHEFSKPIEGKKQEKAILDGDCKKL---SSLINENSKRRMDFLEKVDQGVQVQGKYKXXX 330
+++ K I+ K +K + D K++ S++++ K + ++ +++ + K+
Sbjct: 282 IYDLQKRIDEMKTQKEKIHEDTKEITEKSNMLSNEMKAKNSAVKDIEKKLHKATKFIEEN 341
Query: 331 XXXXXXXXXXXXILKARXXXXXXXXXXQTVPAYEPPHDKIEKLGSQILELGVQANQKRLQ 390
++ + + + +K+E+L S + N+ +
Sbjct: 342 KEKFRQLDLEDVQVREKLKHATSKAK-KLEKQLQKDKEKVEELKSIPAKSKTIINETTTK 400
Query: 391 KS--EKEKILNQNKL-----TLRQCSDRL-KDMEDKNNKLL 423
S EKEK + KL +L+Q + L K+ ED+ +L+
Sbjct: 401 SSSLEKEKEKEEKKLKEVMDSLKQETQGLQKEKEDQEKELM 441
>POMBASE|SPBC146.03c [details] [associations]
symbol:cut3 "condensin complex subunit Cut3"
species:4896 "Schizosaccharomyces pombe" [GO:0000070 "mitotic
sister chromatid segregation" evidence=IMP] [GO:0000796 "condensin
complex" evidence=IDA] [GO:0000939 "condensed chromosome inner
kinetochore" evidence=IGI] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA] [GO:0007076
"mitotic chromosome condensation" evidence=IMP] [GO:0034613
"cellular protein localization" evidence=IMP] InterPro:IPR024704
InterPro:IPR010935 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 PomBase:SPBC146.03c Pfam:PF02463 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0034613 GO:GO:0051301
EMBL:CU329671 GO:GO:0006281 GenomeReviews:CU329671_GR GO:GO:0006310
GO:GO:0007076 GO:GO:0000939 GO:GO:0000796 GO:GO:0007062 KO:K06675
SUPFAM:SSF75553 OMA:IAIEFLT HOGENOM:HOG000184777 EMBL:D30788
EMBL:AB027959 PIR:S51622 RefSeq:NP_595392.1
ProteinModelPortal:P41004 DIP:DIP-35048N IntAct:P41004
STRING:P41004 EnsemblFungi:SPBC146.03c.1 GeneID:2539817
KEGG:spo:SPBC146.03c OrthoDB:EOG4WM82V NextBio:20800966
Uniprot:P41004
Length = 1324
Score = 116 (45.9 bits), Expect = 2.1e-08, Sum P(3) = 2.1e-08
Identities = 78/344 (22%), Positives = 156/344 (45%)
Query: 653 EAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINT-ALAKLVDQAAD 711
E K K++ +N + +K+K + + +L ++ E D T ++A L +
Sbjct: 946 EQLKFVKDK---LNKMSFKKKKNEQRSQSFQV---ELSNLTSEYDTTTESIATLKTELQS 999
Query: 712 LNIQQFKYAIEIKNLLVEIVSCKW---SYAEKHMASIEFDAK----IR----ELEFNLKQ 760
LN KY E K+ L E + W S ++ + IEF++K ++ ELE N Q
Sbjct: 1000 LN----KYVDEHKSRLREFENALWDINSSIDELVKFIEFESKQMNSVKAERIELE-NQIQ 1054
Query: 761 HEKLALQASLHYED-CKKEVEHCRKH-LSDAKRQAESIAFITPELEKEFLEMPTTIEELE 818
++ AL + E+ K + + + H L++ Q ++ PE ++ L +++++ E
Sbjct: 1055 EQRTALSEVGNNENKYLKLMSNLKLHNLTEFCDQT-TMDSTFPEYSEDEL---SSVDKSE 1110
Query: 819 AAIQDNIS---QANSIFFLNQNILQEYEHRQRQIE--DLSTKQEADKK-ELKRFLAEIDA 872
+ NIS + ++ N+L EY ++ E D + E K+ +LK+ + ++ +
Sbjct: 1111 --LVSNISVLKKKTEDREVDINVLSEYRRCNKEAEKRDSDYQSELQKRTDLKKVVTDLQS 1168
Query: 873 LKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKF--GILIKVKFRQSGQ 930
+ L I+ +Q + + G L+ +S D F G+L V +
Sbjct: 1169 QR---LDEFMYGFGIISMKLKEMYQIITMGGNAELELVDS-LDPFSEGVLFSVMPPKKSW 1224
Query: 931 LEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMD 974
+ + SGGE+++S++ + +L + P V+DEI+ +D
Sbjct: 1225 KNISNL---SGGEKTLSSLALVFALHNYKPTPLYVMDEIDAALD 1265
Score = 108 (43.1 bits), Expect = 2.1e-08, Sum P(3) = 2.1e-08
Identities = 56/236 (23%), Positives = 100/236 (42%)
Query: 23 IIEIELHNFMTFDHL-ICKP-GSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI 80
+ E+ L NF ++ I P + ++GPNGSGKS+++ A+ G L R +
Sbjct: 126 VYELRLTNFKSYAGTQIVGPFHPSFSSIVGPNGSGKSNVIDALLFVFGFRASKL-RQSKA 184
Query: 81 GAYVKRGE-----ESGYIKISLRGDTKE------EHLTIMRKIDTRNKSEWFFNGKVVPK 129
A + + +S ++I+ + + LT+ R N S++F NG
Sbjct: 185 SALIHKSATHPSLDSCDVEITFKEVNSDFTYVDGSELTVRRTAYKNNTSKYFVNGVESSF 244
Query: 130 GEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEK 189
V + K I +N+ + Q V A++ P + E GD L +++ +
Sbjct: 245 SAVSNLLKEKGIDLNHKRFLILQGEVESIAQMKPRAISE------GDDGL-LEYLEDIIG 297
Query: 190 SSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLK 245
+SK K I ++ N L+ + E+E ++ V LE +S L +LK
Sbjct: 298 TSKYKPI---IEENMQELSNSDDICAEKESRLKLVLSEKAKLE--DSKNSVLSFLK 348
Score = 82 (33.9 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05
Identities = 42/183 (22%), Positives = 87/183 (47%)
Query: 650 IEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLES-IEKEDDINTALAKLVDQ 708
++DE K+ + I+ + K+ ++N +N + KL++ +EK + +++ ++
Sbjct: 347 LKDENELFMKQNQLYRTILYETRNKKTLVQNLLNSLEGKLQAHLEKFEQTERDISEKNEE 406
Query: 709 AADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKL--AL 766
L + A ++KN + SY E+ IE +L+F L + +KL ++
Sbjct: 407 VKSLR----EKAAKVKNDCTSEKKTRQSY-EQQTVKIE-----EQLKFLLNKEKKLKKSI 456
Query: 767 QASLHYEDCKKEVEHC-RKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNI 825
+A L +E K E E+ H D+++ IA ++ L++E L + + L+ + I
Sbjct: 457 EA-LSFE--KSEAENSLSSHDIDSQKLNSEIADLSLRLQQEELSLDDIRKSLQGKTE-GI 512
Query: 826 SQA 828
S A
Sbjct: 513 SNA 515
Score = 77 (32.2 bits), Expect = 2.5e-05, Sum P(3) = 2.5e-05
Identities = 29/132 (21%), Positives = 55/132 (41%)
Query: 188 EKSSKLKTI-ECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKY 246
EK+ ++K++ E K D ++ K +++ V+ Q LL K + +KK + L +
Sbjct: 402 EKNEEVKSLREKAAKVKNDCTSEKKTRQSYEQQTVKIEEQLKFLLNKEKKLKKSIEALSF 461
Query: 247 DMKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENS 306
+ +AE +L + + K+ L G + +S+ I E
Sbjct: 462 EKSEAENSLSSHDIDSQKLNSEIADLSLRLQQEELSLDDIRKS-LQGKTEGISNAIEEKQ 520
Query: 307 KRRMDFLEKVDQ 318
K LEK++Q
Sbjct: 521 KAMAPALEKINQ 532
Score = 77 (32.2 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 48/241 (19%), Positives = 101/241 (41%)
Query: 647 QRLIEDEAAKLQKEREEI-IN----IVQIEKRKRREMENHINLRKRKLESIEKEDDINTA 701
+R ++++ + + KE E I IN + +I+ + + ME +R R +S K DD++
Sbjct: 891 KRNLQNKISNMDKEVEAININNEGLVTEIKTLQDKIMEIG-GIRYRIQKS--KVDDLHEQ 947
Query: 702 LAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQH 761
L + D+ ++ ++ K ++ VE+ + Y + +++ L + +H
Sbjct: 948 LKFVKDKLNKMSFKKKKNEQRSQSFQVELSNLTSEYDTTTESIATLKTELQSLNKYVDEH 1007
Query: 762 EKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELE--- 818
+ + D ++ K + +Q S+ ELE + E T + E+
Sbjct: 1008 KSRLREFENALWDINSSIDELVKFIEFESKQMNSVKAERIELENQIQEQRTALSEVGNNE 1067
Query: 819 ---AAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKE 875
+ N+ N F +Q + + ++LS+ DK EL ++ I LK+
Sbjct: 1068 NKYLKLMSNLKLHNLTEFCDQTTMDSTFPEYSE-DELSS---VDKSEL---VSNISVLKK 1120
Query: 876 K 876
K
Sbjct: 1121 K 1121
Score = 76 (31.8 bits), Expect = 0.00021, Sum P(3) = 0.00021
Identities = 45/219 (20%), Positives = 93/219 (42%)
Query: 648 RLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIE-KEDDINTALAKLV 706
RL+ E ++ + + ++ +I +RKR ++N I+ +++E+I + + T + L
Sbjct: 865 RLVAGEERRILQLKSDLKSIRNNNERKRN-LQNKISNMDKEVEAININNEGLVTEIKTLQ 923
Query: 707 DQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLAL 766
D+ + I +Y I+ V+ + + + + + + F K E Q E L
Sbjct: 924 DKI--MEIGGIRYRIQKSK--VDDLHEQLKFVKDKLNKMSFKKKKNEQRSQSFQVELSNL 979
Query: 767 QASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNIS 826
+ Y+ + + + L + + E E ++ ++I+EL I+
Sbjct: 980 TSE--YDTTTESIATLKTELQSLNKYVDEHKSRLREFENALWDINSSIDELVKFIEFESK 1037
Query: 827 QANSIFFLNQNILQEYEHR-QRQIEDLSTKQEADKKELK 864
Q NS+ + I E E++ Q Q LS + K LK
Sbjct: 1038 QMNSV--KAERI--ELENQIQEQRTALSEVGNNENKYLK 1072
Score = 48 (22.0 bits), Expect = 2.1e-08, Sum P(3) = 2.1e-08
Identities = 13/42 (30%), Positives = 22/42 (52%)
Query: 392 SEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAEN 433
SEK+ + + + L + +D + D+E + L LRN EN
Sbjct: 535 SEKQILQVELDMLLNKENDLINDVESSQSSL-DKLRNDAEEN 575
Score = 44 (20.5 bits), Expect = 5.2e-08, Sum P(3) = 5.2e-08
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 367 HD-KIEKLGSQILELGVQANQKRLQKSEKEKILNQNK 402
HD +KL S+I +L ++ Q+ L + K L Q K
Sbjct: 473 HDIDSQKLNSEIADLSLRLQQEELSLDDIRKSL-QGK 508
>UNIPROTKB|P50532 [details] [associations]
symbol:smc4 "Structural maintenance of chromosomes protein
4" species:8355 "Xenopus laevis" [GO:0007076 "mitotic chromosome
condensation" evidence=ISS] [GO:0046982 "protein heterodimerization
activity" evidence=ISS] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0005694 GO:GO:0051301 GO:GO:0006281 GO:GO:0006310
GO:GO:0046982 GO:GO:0007076 GO:GO:0007062 KO:K06675 SUPFAM:SSF75553
CTD:10051 HOVERGEN:HBG106696 EMBL:U13673 PIR:A55094
RefSeq:NP_001081371.1 UniGene:Xl.927 ProteinModelPortal:P50532
IntAct:P50532 GeneID:397799 KEGG:xla:397799 Xenbase:XB-GENE-5865892
Uniprot:P50532
Length = 1290
Score = 116 (45.9 bits), Expect = 2.4e-08, Sum P(3) = 2.4e-08
Identities = 78/340 (22%), Positives = 142/340 (41%)
Query: 651 EDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAA 710
+D+ K+ KE +E + + + + + NL+K + E++ + + A K +++
Sbjct: 897 QDKLDKVTKEIDECASAITKAQVSIKTADR--NLKKSE-EAVARTEKEIVANDKSIEELT 953
Query: 711 -DLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQAS 769
DL + K A + N E E+H + ++ I+E E L +K AL
Sbjct: 954 EDLKKLEEK-ATTVMNECKEAECSLPEVQEQHRSLLQEIKAIQEKEHAL---QKEALNIR 1009
Query: 770 LHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLE--MPTTI-EELEAAIQDNIS 826
L+ E H +H S K + I I+ ++ E +P EELEA I+D
Sbjct: 1010 LNIEQIDS---HIAEHQSKIKYWQKEITKISLHKIEDIPEEVLPGLAQEELEA-IKDPDQ 1065
Query: 827 QANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKK---ELKRFLAEIDALKEKW----LP 879
N I L E + I + K+E + EL E D+ + +
Sbjct: 1066 IINQIALLEAKS-HEMKPNLGAIAEYKKKEELYLQRVAELDEITNERDSFRRAYEDLRKQ 1124
Query: 880 TLRNLVAQIN---ETFSRNFQEMAVAGEVSLDEHESDFDKF--GILIKVKFRQSGQLEVL 934
L +A N N+Q + + G+ L+ +S D F GI+ V+ + ++
Sbjct: 1125 RLNEFMAGFNIITNKLKENYQMLTLGGDAELELVDS-LDPFSEGIMFSVRPPKKSWKKIF 1183
Query: 935 SAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMD 974
+ SGGE+++S++ + +L P +DEI+ +D
Sbjct: 1184 NL---SGGEKTLSSLALVFALHHYKPTPLYFMDEIDAALD 1220
Score = 108 (43.1 bits), Expect = 1.6e-07, Sum P(3) = 1.6e-07
Identities = 63/248 (25%), Positives = 114/248 (45%)
Query: 647 QRLIEDEA-AKLQ-KEREEIINIVQIEKRKRREMENHINLRKRKLESI-EKEDDINTALA 703
Q L E E K Q KE E + +K ++++ME ++ K++ E + EK + +
Sbjct: 820 QSLSEQEVHLKAQVKELEVNVAAAAPDKNQQKQMEKNLETLKKEYEKVAEKAGKVEAEVK 879
Query: 704 KLVDQAADLNIQQFKYAIE-IKNLLVEIVSCKWSYAEKHMASIEF-DAKIRELEFNLKQH 761
+L D+N + K + + + EI C S K SI+ D +++ E + +
Sbjct: 880 RLHKLIVDINNHKLKAQQDKLDKVTKEIDECA-SAITKAQVSIKTADRNLKKSEEAVART 938
Query: 762 EK--LALQASLHY--EDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEEL 817
EK +A S+ ED KK E +++ K +AE E + L+ I+E
Sbjct: 939 EKEIVANDKSIEELTEDLKKLEEKATTVMNECK-EAECSLPEVQEQHRSLLQEIKAIQEK 997
Query: 818 EAAIQD-------NISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEAD-KKELKRFLA- 868
E A+Q NI Q +S +Q+ ++ + Q++I +S + D +E+ LA
Sbjct: 998 EHALQKEALNIRLNIEQIDSHIAEHQSKIKYW---QKEITKISLHKIEDIPEEVLPGLAQ 1054
Query: 869 -EIDALKE 875
E++A+K+
Sbjct: 1055 EELEAIKD 1062
Score = 103 (41.3 bits), Expect = 2.4e-08, Sum P(3) = 2.4e-08
Identities = 59/245 (24%), Positives = 105/245 (42%)
Query: 23 IIEIELHNFMTF-DHLICKP-GSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI 80
I I NF ++ I P R + +IGPNGSGKS+++ ++ G Q + R+ +
Sbjct: 78 ITHIVNQNFKSYAGERILGPFHKRFSCIIGPNGSGKSNVIDSMLFVFGYRAQKI-RSKKL 136
Query: 81 GAYVKRGEESGYIK-----------ISLRGDTKE----EHLTIMRKIDTRNKSEWFFNGK 125
+ +E ++ I GD E + + R N S + +GK
Sbjct: 137 SVLIHNSDEHKDVQSCTVEVHFQKIIDKEGDDFEVIPNSNFYVSRTAYKDNSSVYHISGK 196
Query: 126 VVPKGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCA 185
+V + + I +++ + Q V + A + P E E + + +
Sbjct: 197 KATFKDVGLLLRSHGIDLDHNRFLILQGEVEQIAMMKPKGQTEHDEGMLEYLEDIIGSER 256
Query: 186 LVEKSSKL-KTIECTVKRNGDTLNQLKALNVEQEKD-VERVRQRA-ELLE-KVESMKKKL 241
L E L + +E ++ G+ LN++K VE+EKD +E + +A E L + E+ KKK
Sbjct: 257 LKEPIQILCRRVELLNEQRGEKLNRVKM--VEKEKDALEGEKNKAIEFLTVENETFKKKN 314
Query: 242 PWLKY 246
+Y
Sbjct: 315 QLCQY 319
Score = 92 (37.4 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 36/151 (23%), Positives = 75/151 (49%)
Query: 739 EKHMASIEFDAKIRELEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAF 798
EK ++E + K + +EF ++E + L C+ + +K D + Q E I
Sbjct: 286 EKEKDALEGE-KNKAIEFLTVENETFKKKNQL----CQYYIHDLQKRSRDKEAQKEKIQE 340
Query: 799 ITPELEKEFLEMPTTIEELEAAIQDNISQANSIF-FLNQNILQEYEHRQRQIEDLSTKQE 857
T ++ ++ + T++E A++D Q N I F+ +N +E + Q ++D+ T+++
Sbjct: 341 DTKDISEKSNTLLETMKEKNKALKDVEKQLNKITKFIEEN--RE-KFTQLDLQDVDTREK 397
Query: 858 A--DKKELKRFLAEIDALKEKWLPTLRNLVA 886
K ++K+ ++ KEK + L+N+ A
Sbjct: 398 LKHSKSKVKKLQKQLQKDKEK-VDELKNVPA 427
Score = 81 (33.6 bits), Expect = 8.1e-05, Sum P(3) = 8.1e-05
Identities = 51/246 (20%), Positives = 104/246 (42%)
Query: 646 EQRLIED--EAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESI-EKEDDINTAL 702
E +L D A ++Q + + V ++ REM+N L+S+ E+E + +
Sbjct: 774 ENKLKTDTTRATEIQDRKAHLEEEVAKLRQATREMKNTFEKYTASLQSLSEQEVHLKAQV 833
Query: 703 AKL-VDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAK-IRELEFNLKQ 760
+L V+ AA + + +E KNL E + ++ + +E + K + +L ++
Sbjct: 834 KELEVNVAAAAPDKNQQKQME-KNL--ETLKKEYEKVAEKAGKVEAEVKRLHKLIVDINN 890
Query: 761 HEKLALQASL-----HYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIE 815
H+ A Q L ++C + + + A R + EKE + +IE
Sbjct: 891 HKLKAQQDKLDKVTKEIDECASAITKAQVSIKTADRNLKKSEEAVARTEKEIVANDKSIE 950
Query: 816 ELEAAIQDNISQANSIFFLNQNI------LQEYEHRQ--RQIEDLSTKQEADKKELKRFL 867
EL ++ +A ++ + +QE +HR ++I+ + K+ A +KE
Sbjct: 951 ELTEDLKKLEEKATTVMNECKEAECSLPEVQE-QHRSLLQEIKAIQEKEHALQKEALNIR 1009
Query: 868 AEIDAL 873
I+ +
Sbjct: 1010 LNIEQI 1015
Score = 73 (30.8 bits), Expect = 0.00018, Sum P(4) = 0.00018
Identities = 25/129 (19%), Positives = 55/129 (42%)
Query: 748 DAKIRELEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEF 807
D +++++E LK A + ++EV R+ + K E L ++
Sbjct: 767 DDQLQKMENKLKTDTTRATEIQDRKAHLEEEVAKLRQATREMKNTFEKYTASLQSLSEQE 826
Query: 808 LEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFL 867
+ + ++ELE + N + +N L+ + ++ + + K EA+ K L + +
Sbjct: 827 VHLKAQVKELEVNVAAAAPDKNQQKQMEKN-LETLKKEYEKVAEKAGKVEAEVKRLHKLI 885
Query: 868 AEIDALKEK 876
+I+ K K
Sbjct: 886 VDINNHKLK 894
Score = 70 (29.7 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 32/135 (23%), Positives = 65/135 (48%)
Query: 125 KVVPKGEVLEITKRFNIQVNNLTQFLPQDRVC--EFAK-LSPV-KLLEETEKAVGDPQLP 180
K K ++ E TK + + N L + + + + K L+ + K +EE + QL
Sbjct: 331 KEAQKEKIQEDTKDISEKSNTLLETMKEKNKALKDVEKQLNKITKFIEENREKF--TQLD 388
Query: 181 VQHCALVEK----SSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKV-E 235
+Q EK SK+K ++ ++++ + +++LK + +K + + +LLEK E
Sbjct: 389 LQDVDTREKLKHSKSKVKKLQKQLQKDKEKVDELKNVPANSQKIIAEETNKKDLLEKQKE 448
Query: 236 SMKKKLPWLKYDMKK 250
++KL + +KK
Sbjct: 449 KEEEKLKNVMDSLKK 463
Score = 69 (29.3 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 46/230 (20%), Positives = 89/230 (38%)
Query: 185 ALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEK-VESMKKKLPW 243
AL + +L I ++ N + QL +V+ + ++ + + + L+K ++ K+K+
Sbjct: 362 ALKDVEKQLNKITKFIEENREKFTQLDLQDVDTREKLKHSKSKVKKLQKQLQKDKEKVDE 421
Query: 244 LKYDMKKAEYIXXXXXXXXXXXXXXXXX------NTLHEFSKPIEGKKQEKAILDGDCKK 297
LK ++ I N + K +G ++EK + + + +
Sbjct: 422 LKNVPANSQKIIAEETNKKDLLEKQKEKEEEKLKNVMDSLKKETQGLQEEKEVKEKELME 481
Query: 298 LSSLINENSKRRMDFLE-KVDQGVQVQGKYKXXXXXXXXXXXXXXXILKARXXXXXXXXX 356
+S +NE ++ +MD + ++D + LK R
Sbjct: 482 ISKTVNE-ARSKMDVAQSELDIYLSRHNSALSQLNKAKEALNTASATLKERRAAIKELET 540
Query: 357 XQTVPAYEPPHDKIEK-LGSQILELGVQANQKR--LQKSEKEKI-LNQNK 402
+P E K EK L S + E G NQ R QK E+ + L+ N+
Sbjct: 541 K--LPKDEGDLKKREKELESLVSEEGNIKNQVRELRQKVEEARSSLSANR 588
Score = 52 (23.4 bits), Expect = 2.4e-08, Sum P(3) = 2.4e-08
Identities = 12/42 (28%), Positives = 26/42 (61%)
Query: 383 QANQKRLQKSEKEKILNQNKL--TLRQCSDRLKDMEDKNNKL 422
+A ++++Q+ K+ N L T+++ + LKD+E + NK+
Sbjct: 332 EAQKEKIQEDTKDISEKSNTLLETMKEKNKALKDVEKQLNKI 373
Score = 50 (22.7 bits), Expect = 3.8e-08, Sum P(3) = 3.8e-08
Identities = 16/53 (30%), Positives = 26/53 (49%)
Query: 372 KLGSQILELGVQANQKRLQKSE--KEKILNQNKLTLRQCSDRLKDMEDKNNKL 422
K +Q+ + + QKR + E KEKI K + + L+ M++KN L
Sbjct: 311 KKKNQLCQYYIHDLQKRSRDKEAQKEKIQEDTKDISEKSNTLLETMKEKNKAL 363
Score = 49 (22.3 bits), Expect = 4.8e-08, Sum P(3) = 4.8e-08
Identities = 34/161 (21%), Positives = 68/161 (42%)
Query: 389 LQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALR--NSGAENIFEAYCWLQQHRH 446
LQK ++K + K+ + KD+ +K+N LL ++ N +++ + + +
Sbjct: 324 LQKRSRDKEAQKEKI-----QEDTKDISEKSNTLLETMKEKNKALKDVEKQLNKITKFIE 378
Query: 447 ELNKEAYGPVLLEVNVSNRAHANYLEDHVGHYIWKSFITQDAGDRDFLAKNLKPFDVPIL 506
E N+E + + L+ +V R + + V + K + +D D L KN+ I+
Sbjct: 379 E-NREKFTQLDLQ-DVDTREKLKHSKSKVKK-LQKQ-LQKDKEKVDEL-KNVPANSQKII 433
Query: 507 NYVSNESSRKEPFQISEEMRALGISARLDQVFDAPHAVKEV 547
+N+ E + EE + + L + KEV
Sbjct: 434 AEETNKKDLLEKQKEKEEEKLKNVMDSLKKETQGLQEEKEV 474
Score = 48 (22.0 bits), Expect = 0.00018, Sum P(4) = 0.00018
Identities = 15/64 (23%), Positives = 32/64 (50%)
Query: 644 QTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALA 703
+ E +L +DE L+K +E+ ++V E ++N + ++K+E N +
Sbjct: 537 ELETKLPKDEG-DLKKREKELESLVSEEGN----IKNQVRELRQKVEEARSSLSANRSRG 591
Query: 704 KLVD 707
K++D
Sbjct: 592 KVLD 595
>SGD|S000003610 [details] [associations]
symbol:SMC3 "Subunit of the multiprotein cohesin complex"
species:4932 "Saccharomyces cerevisiae" [GO:0007130 "synaptonemal
complex assembly" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0030437 "ascospore formation" evidence=IMP] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005694 "chromosome"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0051177 "meiotic sister chromatid
cohesion" evidence=IMP] [GO:0007131 "reciprocal meiotic
recombination" evidence=IMP] [GO:0051276 "chromosome organization"
evidence=IEA] [GO:0007064 "mitotic sister chromatid cohesion"
evidence=IGI] [GO:0034990 "nuclear mitotic cohesin complex"
evidence=IDA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR010935 Pfam:PF06470
SMART:SM00968 InterPro:IPR003395 SGD:S000003610 Pfam:PF02463
GO:GO:0005524 GO:GO:0051301 EMBL:BK006943 GO:GO:0016887 EMBL:X88851
GO:GO:0030437 GO:GO:0007131 GO:GO:0007130 GO:GO:0007064
eggNOG:COG1196 SUPFAM:SSF75553 GO:GO:0051177 GO:GO:0034990
HOGENOM:HOG000166512 KO:K06669 GeneTree:ENSGT00580000081628
OrthoDB:EOG4TB7KF EMBL:Y14278 EMBL:Z49349 PIR:S56850
RefSeq:NP_012461.1 ProteinModelPortal:P47037 SMR:P47037
DIP:DIP-2991N IntAct:P47037 MINT:MINT-435389 STRING:P47037
PaxDb:P47037 PeptideAtlas:P47037 EnsemblFungi:YJL074C GeneID:853371
KEGG:sce:YJL074C CYGD:YJL074c OMA:NIRMENI NextBio:973810
Genevestigator:P47037 GermOnline:YJL074C Uniprot:P47037
Length = 1230
Score = 139 (54.0 bits), Expect = 2.7e-08, Sum P(3) = 2.7e-08
Identities = 87/435 (20%), Positives = 167/435 (38%)
Query: 46 NLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSIGAYVKRGEESGYIKISLR------- 98
N++IG NGSGKS+ AI L D L R G + +G + S+
Sbjct: 28 NVIIGSNGSGKSNFFAAIRFVLSDDYSNLKREERQGL-IHQGSGGSVMSASVEIVFHDPD 86
Query: 99 -------G--DTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQF 149
G ++ +TI R + + K ++ N + V KG+++ + + +NN
Sbjct: 87 HSMILPSGVLSRGDDEVTIRRTVGLK-KDDYQLNDRNVTKGDIVRMLETAGFSMNNPYNI 145
Query: 150 LPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQ 209
+PQ ++ + L+ E VG V+ A ++K + + + + + LN
Sbjct: 146 VPQGKIVALTNAKDKERLQLLEDVVGAKSFEVKLKASLKKMEETEQKKIQINKEMGELNS 205
Query: 210 LKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAEYIXXXXXXXXXXXXXXX 269
K +EQE R+ E ++E +K + YD + E I
Sbjct: 206 -KLSEMEQE------RKELEKYNELERNRKIYQFTLYDRELNEVINQMERLDGDYN---- 254
Query: 270 XXNTLHEFSKPIEGKKQEKAILDGDCKKLSSL-INENSKRRMDFLEKVDQGVQVQGKYKX 328
NT++ + I+ + + ++D KKLSS+ + K D + + ++ K
Sbjct: 255 --NTVYSSEQYIQELDKREDMIDQVSKKLSSIEASLKIKNATDLQQAKLRESEISQKLTN 312
Query: 329 XXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPAYEPPHDKIEKLGSQILELGVQANQKR 388
+ R +++ E K+ K+ + EL + +
Sbjct: 313 VNVKIKDVQQQIESNEEQRNLDSATLKEIKSI--IEQRKQKLSKILPRYQELTKEEAMYK 370
Query: 389 LQKSEKEKILNQNKLTLRQCS-DRLKDMEDKNNKLLHALRN--SGAENIFEAYCWLQQHR 445
LQ + ++ Q L L++ R K ++++ + + S +N+ E LQ R
Sbjct: 371 LQLASLQQ--KQRDLILKKGEYARFKSKDERDTWIHSEIEELKSSIQNLNELESQLQMDR 428
Query: 446 HELNKEAYGPVLLEV 460
L K+ Y + E+
Sbjct: 429 TSLRKQ-YSAIDEEI 442
Score = 91 (37.1 bits), Expect = 2.7e-08, Sum P(3) = 2.7e-08
Identities = 33/145 (22%), Positives = 68/145 (46%)
Query: 841 EYEHRQRQIEDLSTKQEADK-----KELKRFLAEIDALKEKWLP--TLRNLVAQINETFS 893
E + + I+DL K + K ++ +A+ E+ +P T + ++ + N+ +
Sbjct: 1018 ELDESKDSIQDLIVKLKQQKVNAVDSTFQKVSENFEAVFERLVPRGTAKLIIHRKNDNAN 1077
Query: 894 RNFQEMAVAGEVSLDEHESDFDK----FGILIKVKFRQSGQLEVLSAHHQSGGERSVSTI 949
+ + + V + +E ++ D G+ I V F S Q E L SGG+++V I
Sbjct: 1078 DHDESIDVDMDAESNESQNGKDSEIMYTGVSISVSFN-SKQNEQLHVEQLSGGQKTVCAI 1136
Query: 950 LYLVSLQDLTNCPFRVVDEINQGMD 974
++++Q + F + DEI+ +D
Sbjct: 1137 ALILAIQMVDPASFYLFDEIDAALD 1161
Score = 71 (30.1 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 60/289 (20%), Positives = 130/289 (44%)
Query: 646 EQRLIEDEAAKLQKEREEII---NIVQIEKRKRREMENHINLRKRKLES--IEKEDDINT 700
+ L ++E +L+ +EI N + I + I+ +LES I +E+D+ +
Sbjct: 794 DSELSKEEKERLESLTKEISAAHNKLNITSDALEGITTTIDSLNAELESKLIPQENDLES 853
Query: 701 ALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSY--AEKHMASI--EFDAKIRELEF 756
++++ D A +Q E+K L +E S + + A + ++ E ++ I E
Sbjct: 854 KMSEVGD-AFIFGLQD-----ELKELQLEKESVEKQHENAVLELGTVQREIESLIAEETN 907
Query: 757 NLKQHEKLALQASL---HYEDCKKEVEHC--RKHLSDAKRQA--ESIAFI--TPE--LEK 805
N K EK Q L ++ +K VE +K +R+ + I I PE L
Sbjct: 908 NKKLLEKANNQQRLLLKKLDNFQKSVEKTMIKKTTLVTRREELQQRIREIGLLPEDALVN 967
Query: 806 EFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKR 865
+F ++ T ++L + D ++ + + +N+ + ++ + +DL+ ++ ++ E K
Sbjct: 968 DFSDI--TSDQLLQRLNDMNTEISGLKNVNKRAFENFKKFNERRKDLA-ERASELDESKD 1024
Query: 866 FLAE-IDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESD 913
+ + I LK++ + + + +++E F F+ + G L H +
Sbjct: 1025 SIQDLIVKLKQQKVNAVDSTFQKVSENFEAVFERLVPRGTAKLIIHRKN 1073
Score = 54 (24.1 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 55/275 (20%), Positives = 119/275 (43%)
Query: 649 LIEDEAAKLQKEREEIINIVQIE-KR--KRREMEN-HINLRKR-KLESIEKEDDINTALA 703
+++D L+ ++ +N + ++ R KR + +++ KR +LES++ ++ +
Sbjct: 640 VVKDLGQGLKLAKKHKLNAITLDGDRADKRGVLTGGYLDQHKRTRLESLKNLNESRSQHK 699
Query: 704 KLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEK 763
K++++ D ++ I+ K ++ V+ S+ + ++ N K++EK
Sbjct: 700 KILEEL-DF-VRNELNDIDTK---IDQVNGNIRKVSNDRESVLTNIEVYRTSLNTKKNEK 754
Query: 764 LALQASLHYEDCKKEVEHCRKHLSDAKRQA---ESIAFITPELEKEFLE-MPTTIEELEA 819
L L+ SL+ K E + + + K + + EL KE E + + +E+ A
Sbjct: 755 LILEESLNAIILKLEKLNTNRTFAQEKLNTFENDLLQEFDSELSKEEKERLESLTKEISA 814
Query: 820 AIQD-NISQ------ANSIFFLNQNILQEYEHRQRQIED-LSTKQEADKKELKRFLAEID 871
A NI+ +I LN + + ++ +E +S +A L+ L E+
Sbjct: 815 AHNKLNITSDALEGITTTIDSLNAELESKLIPQENDLESKMSEVGDAFIFGLQDELKELQ 874
Query: 872 ALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVS 906
KE N V ++ T R + + +A E +
Sbjct: 875 LEKESVEKQHENAVLELG-TVQREIESL-IAEETN 907
Score = 39 (18.8 bits), Expect = 2.7e-08, Sum P(3) = 2.7e-08
Identities = 19/85 (22%), Positives = 41/85 (48%)
Query: 490 DRDFLAKNLKPFDVPILNYVSNESSRKEPFQISEEMRALGISARLDQVFDAPHAVKEVLI 549
+R F + L F+ +L +E S++E ++ E ISA +++ A++ +
Sbjct: 774 NRTFAQEKLNTFENDLLQEFDSELSKEEKERL--ESLTKEISAAHNKLNITSDALEGITT 831
Query: 550 SQFGLDSSYIGSKETDQKADNVAKL 574
+ L++ + SK Q+ D +K+
Sbjct: 832 TIDSLNAE-LESKLIPQENDLESKM 855
>FB|FBgn0040283 [details] [associations]
symbol:SMC1 "SMC1" species:7227 "Drosophila melanogaster"
[GO:0003677 "DNA binding" evidence=ISS] [GO:0008278 "cohesin
complex" evidence=ISS;IDA;NAS] [GO:0007062 "sister chromatid
cohesion" evidence=ISS;NAS] [GO:0030261 "chromosome condensation"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0010629 "negative regulation of gene expression"
evidence=IGI] [GO:0005694 "chromosome" evidence=IDA] [GO:0048813
"dendrite morphogenesis" evidence=IMP] [GO:0016319 "mushroom body
development" evidence=IMP] [GO:0016322 "neuron remodeling"
evidence=IMP] [GO:0035327 "transcriptionally active chromatin"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005700
"polytene chromosome" evidence=IDA] InterPro:IPR024704
InterPro:IPR010935 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0005634
GO:GO:0006281 GO:GO:0016322 GO:GO:0048813 GO:GO:0006310
GO:GO:0016319 GO:GO:0010629 GO:GO:0030261 GO:GO:0005700
GO:GO:0035327 GO:GO:0008278 GO:GO:0007062 SUPFAM:SSF75553
HSSP:Q9X0R4 EMBL:AF225909 EMBL:AJ271845 STRING:Q9N6I4
FlyBase:FBgn0040283 InParanoid:Q9N6I4 OrthoDB:EOG4QNKB0
Uniprot:Q9N6I4
Length = 1238
Score = 135 (52.6 bits), Expect = 2.8e-08, Sum P(3) = 2.8e-08
Identities = 63/237 (26%), Positives = 104/237 (43%)
Query: 26 IELHNFMTF-DHLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLG--------R 76
IE+ NF ++ H++ P + N VIGPNGSGKS+ + AI+ +G T L
Sbjct: 30 IEMENFKSYRGHIVVGPLKQFNAVIGPNGSGKSNFMDAISFVMGEKTSSLRVKRLNDLIH 89
Query: 77 ATSIGAYVKRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEIT 136
+SIG V R S Y+ + +E H+ R + SE+ NG+ V L
Sbjct: 90 GSSIGNPVSR---SCYVTAKFVLN-EERHMDFQRAV-IGGSSEYRINGESVSSSTYLNKL 144
Query: 137 KRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKS--SKLK 194
++ I V + Q V A +P + E+ G L + L ++ ++ +
Sbjct: 145 EKIGINVKAKNFLVFQGAVENIAMKTPKERTALFEEISGSGLLKDDYNRLKQEMIVAEEE 204
Query: 195 TIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEK-VESMKKKLPWLKYDMKK 250
T K+ G + +A + + E D R + E EK VE +L ++ D++K
Sbjct: 205 TQFTYQKKKGIAAERKEAKHEKMEAD-RYTRLQNEYNEKQVEYQLFRLFHVERDIRK 260
Score = 95 (38.5 bits), Expect = 2.8e-08, Sum P(3) = 2.8e-08
Identities = 69/345 (20%), Positives = 137/345 (39%)
Query: 650 IEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQA 709
+E +Q E + + + E R +E++ K K+E K+D A + VD
Sbjct: 858 VERWERSVQDEEDALEGLKLAEARYLKEIDED----KEKMEKF-KQD--KQAKKQAVD-- 908
Query: 710 ADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIE--FDAKIRELEFNLKQHEKLALQ 767
D+ K ++ NL EI + H++++E +AK E + L Q + +
Sbjct: 909 -DMEEDISKARKDVANLAKEIHN-----VGSHLSAVESKIEAKKNERQNILLQAKTDCIV 962
Query: 768 ASLHYEDCKKEVEHCRKHLSDAKRQAESIAFIT-PELEKEFLEMPT------TIEELEAA 820
L V + E+I + L +E+ ++ T E L+
Sbjct: 963 VPLLRGSLDDAVRQSDPDVPSTSAAMENIIEVDYSSLPREYTKLKDDSAFKKTHEMLQKD 1022
Query: 821 IQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKE----K 876
+Q + I N LQ+ + +++ + + E +K+ KR A + +K +
Sbjct: 1023 LQSKLDVLERIQTPNMKALQKLDAVTEKVQSTNEEFENARKKAKRAKAAFERVKNERSSR 1082
Query: 877 WLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVLSA 936
++ +++ I+ + + + A + D E + GI G+
Sbjct: 1083 FVACCQHISDAIDGIYKKLARNEAAQAYIGPDNPEEPYLD-GI--NYNCVAPGK-RFQPM 1138
Query: 937 HHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKM 981
++ SGGE++++ + L S PF V+DEI+ +D N K+
Sbjct: 1139 NNLSGGEKTIAALALLFSTHSFHPAPFFVLDEIDAALDNTNIGKV 1183
Score = 76 (31.8 bits), Expect = 2.2e-06, Sum P(3) = 2.2e-06
Identities = 47/218 (21%), Positives = 92/218 (42%)
Query: 670 IEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAADLNIQQFKYAIE--IKNLL 727
+ ++ +R E H+ K + E +++E + + K Q+ ++ +E +K +
Sbjct: 685 LARKAKRWDEKHMAQLKMQKERLQEE--LKELVKKSRKQSELATVESQIKGLENRLKYSM 742
Query: 728 VEIVSCKWSYAE--KHMASI-----EFDAKIRELEFNLKQHEKLALQASLHYEDCKKEVE 780
V++ S K S ++ + + EF KI E+E ++ E+ H ++ K+ +
Sbjct: 743 VDLESSKKSISQYDNQLQQVQSQLDEFGPKILEIERRMQNREE-------HIQEIKENMN 795
Query: 781 HCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANS-IFFLNQ-NI 838
+ + + + + I E+E L M A + I NS + F Q +
Sbjct: 796 NVEDKVYASFCRRLGVKNIRQYEERE-LVMQQERARKRAEFEQQIDSINSQLDFEKQKDT 854
Query: 839 LQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEK 876
+ E +R ++D E K R+L EID KEK
Sbjct: 855 KKNVERWERSVQDEEDALEGLKLAEARYLKEIDEDKEK 892
Score = 67 (28.6 bits), Expect = 1.8e-05, Sum P(3) = 1.8e-05
Identities = 52/252 (20%), Positives = 113/252 (44%)
Query: 650 IEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKE-DDINTALAKLVDQ 708
+ED+ R + NI Q E+R+ M+ R RK E++ D IN+ L +
Sbjct: 797 VEDKVYASFCRRLGVKNIRQYEEREL-VMQQE---RARKRAEFEQQIDSINSQLDFEKQK 852
Query: 709 AADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLAL-- 766
N+++++ +++ + +E K + A +++ I+ D + E KQ +K A+
Sbjct: 853 DTKKNVERWERSVQDEEDALE--GLKLAEA-RYLKEIDEDKEKMEKFKQDKQAKKQAVDD 909
Query: 767 ------QASLHYEDCKKEVEHCRKHLS--DAKRQAESIAF--ITPELEKEFLEMPTTIEE 816
+A + KE+ + HLS ++K +A+ I + + + + +P
Sbjct: 910 MEEDISKARKDVANLAKEIHNVGSHLSAVESKIEAKKNERQNILLQAKTDCIVVPLLRGS 969
Query: 817 LEAAIQDNISQANSIFFLNQNILQ-EYEHRQRQ---IEDLSTKQEADKKELKRFLAEIDA 872
L+ A++ + S +NI++ +Y R+ ++D S ++ + K +++D
Sbjct: 970 LDDAVRQSDPDVPSTSAAMENIIEVDYSSLPREYTKLKDDSAFKKTHEMLQKDLQSKLDV 1029
Query: 873 LKEKWLPTLRNL 884
L+ P ++ L
Sbjct: 1030 LERIQTPNMKAL 1041
Score = 66 (28.3 bits), Expect = 2.2e-05, Sum P(3) = 2.2e-05
Identities = 50/223 (22%), Positives = 101/223 (45%)
Query: 734 KWSYAEKHMASIEFDAK-----IREL-EFNLKQHEKLALQASLH-YEDCKK----EVEHC 782
+W EKHMA ++ + ++EL + + KQ E +++ + E+ K ++E
Sbjct: 691 RWD--EKHMAQLKMQKERLQEELKELVKKSRKQSELATVESQIKGLENRLKYSMVDLESS 748
Query: 783 RKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSI-------FF-- 833
+K +S Q + + E + LE+ ++ E IQ+ N++ F
Sbjct: 749 KKSISQYDNQLQQVQSQLDEFGPKILEIERRMQNREEHIQEIKENMNNVEDKVYASFCRR 808
Query: 834 LNQNILQEYEHRQRQIEDLSTKQEAD-KKELKRFLAEIDALKEKWLPTLRNLVAQINETF 892
L +++YE R+ ++ ++ A+ ++++ +++D K+K T +N+ E +
Sbjct: 809 LGVKNIRQYEERELVMQQERARKRAEFEQQIDSINSQLDFEKQK--DTKKNV-----ERW 861
Query: 893 SRNFQEMAVAGE-VSLDE----HESDFDKFGILIKVKFRQSGQ 930
R+ Q+ A E + L E E D DK + KF+Q Q
Sbjct: 862 ERSVQDEEDALEGLKLAEARYLKEIDEDKEKM---EKFKQDKQ 901
Score = 56 (24.8 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 29/166 (17%), Positives = 76/166 (45%)
Query: 643 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTAL 702
++T + + ++K +++ ++ ++KR E+EN +R+ +S+ E+ +
Sbjct: 342 LETAREADNAHQSDIRKLEKQLADVEALKKRFEDEIENE---SQRRGKSVNMEEGLVQEY 398
Query: 703 AKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIE--FDAKIRELEFNLKQ 760
+L Q A+ Q++ ++ N + AS+E F + E +K+
Sbjct: 399 DRL-KQEAEATATQYRSELDSVNREQKSEQDTLDGETNRRASVEESFKKLTLQREEAVKR 457
Query: 761 HEKL-----ALQASLHYE-----DCKKEVEHCRKHLSDAKRQAESI 796
+KL + QA+L + + +++V ++ +++ +R+ E +
Sbjct: 458 RDKLMDHIKSSQAALEEQNRIKDELRRDVGTSKEKIAEKQRELEDV 503
Score = 51 (23.0 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 42/236 (17%), Positives = 102/236 (43%)
Query: 668 VQIEKRKRREMENHINLRKRKLESI-EKEDDINTAL-AKLVDQAADLNIQQFKYAIEIK- 724
+QI K + E+E + L +++ + E+ +I+ +LV Q+ + A+
Sbjct: 579 IQILKEQMLEVETFLPLDYLQVKPLKERLRNISDPRNVRLVFDVLKFEPQEIERAVLFAT 638
Query: 725 -NLLVEIVSCKWSYAEKHMASIEFD-AKIRELEFNLKQHEKLALQASLHYEDCKKEVEHC 782
N LV C+ + + + E D ++ L + ++K L + ++ +K
Sbjct: 639 GNALV----CE-TPEDAMKVAYEIDRSRFDALALDGTFYQKSGLISGGSHDLARKAKRWD 693
Query: 783 RKHLSDAKRQAESIAFITPELEKEFLEMP--TTIEELEAAIQDNISQANSIFFLNQNILQ 840
KH++ K Q E + EL K+ + T+E +++ + + ++ +
Sbjct: 694 EKHMAQLKMQKERLQEELKELVKKSRKQSELATVESQIKGLENRLKYSMVDLESSKKSIS 753
Query: 841 EYEHRQRQIEDLSTKQEADKK--ELKRFLAEIDALKEKWLPTLRNLVAQINETFSR 894
+Y+++ +Q++ S E K E++R + + ++ + N+ ++ +F R
Sbjct: 754 QYDNQLQQVQ--SQLDEFGPKILEIERRMQNREEHIQEIKENMNNVEDKVYASFCR 807
Score = 48 (22.0 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 33/151 (21%), Positives = 65/151 (43%)
Query: 647 QRLIEDEAAKLQKEREEIIN----IVQIEKRKRREMENHINLRKRKLESIEKEDDINT-A 701
++ EDE + R + +N +VQ R ++E E + +L+S+ +E
Sbjct: 370 KKRFEDEIENESQRRGKSVNMEEGLVQEYDRLKQEAEATATQYRSELDSVNREQKSEQDT 429
Query: 702 LAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIR-ELEFNL-K 759
L ++ A + + FK + V+ + + A++E +I+ EL ++
Sbjct: 430 LDGETNRRASVE-ESFKKLTLQREEAVKRRDKLMDHIKSSQAALEEQNRIKDELRRDVGT 488
Query: 760 QHEKLALQASLHYEDCKKEVEHCRKHLSDAK 790
EK+A + ++E+E R L DAK
Sbjct: 489 SKEKIA--------EKQRELEDVRDQLGDAK 511
Score = 39 (18.8 bits), Expect = 2.8e-08, Sum P(3) = 2.8e-08
Identities = 35/142 (24%), Positives = 63/142 (44%)
Query: 390 QKSEKEKILNQNKLTLRQCSDRLKDMEDKNN-KLLHALRNSGAENIFEAYCWLQQHRH-- 446
Q E E L + L ++ +RL+++ D N +L+ + + I A + +
Sbjct: 585 QMLEVETFLPLDYLQVKPLKERLRNISDPRNVRLVFDVLKFEPQEIERAVLFATGNALVC 644
Query: 447 ELNKEAYGPVLLEVNVSNRAHANYLEDHVGHYIWKSFITQDAGDRDFLAKNLKPFDVPIL 506
E ++A V E++ S R A L+ G + KS + G D LA+ K +D
Sbjct: 645 ETPEDAM-KVAYEIDRS-RFDALALD---GTFYQKSGLIS-GGSHD-LARKAKRWDE--- 694
Query: 507 NYVSNESSRKEPFQISEEMRAL 528
+++ +KE Q EE++ L
Sbjct: 695 KHMAQLKMQKERLQ--EELKEL 714
Score = 38 (18.4 bits), Expect = 3.6e-08, Sum P(3) = 3.6e-08
Identities = 10/34 (29%), Positives = 17/34 (50%)
Query: 388 RLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNK 421
R K EK + Q K+ + + LK++ K+ K
Sbjct: 687 RKAKRWDEKHMAQLKMQKERLQEELKELVKKSRK 720
>UNIPROTKB|F1MAD9 [details] [associations]
symbol:Smc4 "Structural maintenance of chromosomes protein"
species:10116 "Rattus norvegicus" [GO:0000796 "condensin complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0006310 "DNA
recombination" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0007076 "mitotic chromosome
condensation" evidence=IEA] [GO:0010032 "meiotic chromosome
condensation" evidence=IEA] [GO:0045132 "meiotic chromosome
segregation" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0051383 "kinetochore organization"
evidence=IEA] InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
RGD:1306680 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0006281
GO:GO:0006310 GO:GO:0007076 GO:GO:0000796 GO:GO:0007062
GeneTree:ENSGT00580000081617 KO:K06675 SUPFAM:SSF75553 OMA:IAIEFLT
CTD:10051 IPI:IPI00372213 RefSeq:NP_001032262.2 UniGene:Rn.163695
Ensembl:ENSRNOT00000013931 GeneID:295107 KEGG:rno:295107
NextBio:638993 Uniprot:F1MAD9
Length = 1286
Score = 122 (48.0 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 67/322 (20%), Positives = 143/322 (44%)
Query: 668 VQIEKRKRREMENHINLRKRKLESIEKE-DDINTALAKLVDQAADLNIQQFKYAIEIKNL 726
++ R ++ ++ + +++++ EKE +D+ T L + D A ++ I+ K A +
Sbjct: 925 IKTADRNLKKAQDSVCRTEKEIKDTEKEINDLKTELKNIEDNAEEV-IKNTKDA---EKS 980
Query: 727 LVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHE---KLAL-QASLHYEDCKKEVEHC 782
L EI ++H A ++ I++ E L++ KL L Q H + ++++
Sbjct: 981 LPEI-------QKEHRALLQELKVIQDNEHALQKDALSIKLKLEQIDGHISEHNSKIKYW 1033
Query: 783 RKHLSDAK------RQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQ 836
+K +S K E+++ ++ E + E ++ P +I A ++ + N
Sbjct: 1034 QKEISKIKLHPVEDNPVETVSVLSQE-DLEAIKSPDSITNQIALLEAQCREMKP----NL 1088
Query: 837 NILQEYEHRQRQIEDLSTKQEADK--KELKRFLAEIDALKEKWLPTLRNLVAQINETFSR 894
+ EY+ ++ L E DK E F + L+++ L I
Sbjct: 1089 GAIAEYKKKEELY--LQRVGELDKITSERDNFRQAYEDLRKQRLNEFMAGFYVITNKLKE 1146
Query: 895 NFQEMAVAGEVSLDEHESDFDKF--GILIKVKFRQSGQLEVLSAHHQSGGERSVSTILYL 952
N+Q + + G+ L+ +S D F GI+ V+ + ++ + SGGE+++S++ +
Sbjct: 1147 NYQMLTLGGDAELELVDS-LDPFSEGIMFSVRPPKKSWKKIFNL---SGGEKTLSSLALV 1202
Query: 953 VSLQDLTNCPFRVVDEINQGMD 974
+L P +DEI+ +D
Sbjct: 1203 FALHHYKPTPLYFMDEIDAALD 1224
Score = 109 (43.4 bits), Expect = 8.4e-07, Sum P(2) = 8.4e-07
Identities = 36/172 (20%), Positives = 82/172 (47%)
Query: 659 KEREEIINIVQIEKRKRREMENHINLRKRKLESI-EKEDDINTALAKLVDQAADLNIQQF 717
KE E + +K++++ +E ++N+ K++ +++ EK + + +L D D+N ++
Sbjct: 838 KELEANVLTTAPDKKQQKLLEENVNVFKKEYDAVAEKAGKVEAEIKRLHDTIIDINNRKL 897
Query: 718 K-YAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYEDCK 776
K ++ + ++ C + + +A I+ + NLK+ + + +D +
Sbjct: 898 KAQQNKLDTINKQLDECASAITKAQVA-------IKTADRNLKKAQDSVCRTEKEIKDTE 950
Query: 777 KEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMP----TTIEELEAAIQDN 824
KE+ + L + + AE + T + EK E+ ++EL+ IQDN
Sbjct: 951 KEINDLKTELKNIEDNAEEVIKNTKDAEKSLPEIQKEHRALLQELKV-IQDN 1001
Score = 99 (39.9 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 75/327 (22%), Positives = 134/327 (40%)
Query: 23 IIEIELHNFMTF-DHLICKP-GSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI 80
I I NF ++ I P R + +IGPNGSGKS+++ ++ G Q + R+ +
Sbjct: 82 ITHIVNQNFKSYAGEKILGPFHKRFSCIIGPNGSGKSNVIDSMLFVFGYRAQKI-RSKKL 140
Query: 81 GAYVKRGEESGYIK-----------ISLRGDTKE----EHLTIMRKIDTRNKSEWFFNGK 125
+ +E I+ I GD + + + R N S + +GK
Sbjct: 141 SVLIHNSDEHTDIQSCTVEVHFQKIIDKEGDDYDVLPNSNFYVSRTAYRDNTSVYHISGK 200
Query: 126 VVPKGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCA 185
+V + + I +++ + Q V + A + P K E ++ + + + C
Sbjct: 201 KRTFKDVGNLLRSHGIDLDHNRFLILQGEVEQIAMMKP-KGQTEHDEGMLEYLEDIIGCG 259
Query: 186 LVEKSSKL--KTIECTVKRNGDTLNQLKALNVEQEKD-VERVRQRA-ELLE-KVESMKKK 240
+ + K+ + +E + G+ LN++K VE+EKD +E + A E L + E KKK
Sbjct: 260 RLNEPIKVLCRRVEILNEHRGEKLNRVKM--VEKEKDALEGEKNIAIEFLTLENEIFKKK 317
Query: 241 LPWLKYDMKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSS 300
+Y YI +HE +K I K +L + K +S
Sbjct: 318 NHICQY------YIYDLQNRIAEMKTQK---EKIHEDTKEITEKSN---VLSNEMKAKNS 365
Query: 301 LINENSKRRMDFLEKVDQGVQVQGKYK 327
+ + K+ L KV + ++ Q K K
Sbjct: 366 AVKDIEKK----LNKVTKFIE-QNKEK 387
Score = 74 (31.1 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 35/155 (22%), Positives = 71/155 (45%)
Query: 102 KEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKL 161
K+ H+ D +N+ K + EIT++ N+ N + + E KL
Sbjct: 316 KKNHICQYYIYDLQNRIAEMKTQKEKIHEDTKEITEKSNVLSNEMKAKNSAVKDIE-KKL 374
Query: 162 SPV-KLLEETEKAVGDPQLPVQHCALVEK----SSKLKTIECTVKRNGDTLNQLKALNVE 216
+ V K +E+ ++ QL ++ + EK +SK K +E ++++ + + +LK++ +
Sbjct: 375 NKVTKFIEQNKEKF--TQLDLEDVQVREKLKHATSKAKKLEKQLQKDKEKVEELKSIPAK 432
Query: 217 QEKDVERVRQRAELLEKV-ESMKKKLPWLKYDMKK 250
+ + R LEK E +KKL + +K+
Sbjct: 433 SKNVINETTTRNNSLEKEREKEEKKLKEVMDSLKQ 467
Score = 67 (28.6 bits), Expect = 6.9e-05, Sum P(2) = 6.9e-05
Identities = 40/175 (22%), Positives = 70/175 (40%)
Query: 152 QDRVCEFAKLSPVKLLEET----EKA-VGDPQLPVQHCALVEKSSKLKTIECTVKRNGDT 206
Q+R+ E K K+ E+T EK+ V ++ ++ A+ + KL + +++N +
Sbjct: 329 QNRIAEM-KTQKEKIHEDTKEITEKSNVLSNEMKAKNSAVKDIEKKLNKVTKFIEQNKEK 387
Query: 207 LNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAEYIXXXXXXXXXXXX 266
QL D+E V+ R +L KK L+ D +K E +
Sbjct: 388 FTQL---------DLEDVQVREKLKHATSKAKKLEKQLQKDKEKVEELKSIPAKSKNVIN 438
Query: 267 XXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENS---KRRMDFLEKVDQ 318
N E + E KK K ++D ++ L E K M F + V++
Sbjct: 439 ETTTRNNSLEKEREKEEKKL-KEVMDSLKQETQGLQKEKEIQEKELMGFNKSVNE 492
>UNIPROTKB|Q15075 [details] [associations]
symbol:EEA1 "Early endosome antigen 1" species:9606 "Homo
sapiens" [GO:0005969 "serine-pyruvate aminotransferase complex"
evidence=IEA] [GO:0055037 "recycling endosome" evidence=IEA]
[GO:0031901 "early endosome membrane" evidence=IEA] [GO:0019897
"extrinsic to plasma membrane" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0045022 "early endosome to late endosome transport"
evidence=NAS] [GO:0030742 "GTP-dependent protein binding"
evidence=IDA] [GO:0005769 "early endosome" evidence=IDA]
[GO:0008270 "zinc ion binding" evidence=TAS] [GO:0005545
"1-phosphatidylinositol binding" evidence=IDA] [GO:0005516
"calmodulin binding" evidence=NAS] [GO:0016189 "synaptic vesicle to
endosome fusion" evidence=TAS] [GO:0042803 "protein
homodimerization activity" evidence=IDA] [GO:0006906 "vesicle
fusion" evidence=IMP] [GO:0006897 "endocytosis" evidence=IMP]
[GO:0016020 "membrane" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
InterPro:IPR000306 InterPro:IPR007087 InterPro:IPR015880
Pfam:PF01363 PROSITE:PS00028 PROSITE:PS50157 SMART:SM00064
SMART:SM00355 GO:GO:0005829 GO:GO:0042803 GO:GO:0031901
GO:GO:0046872 GO:GO:0005545 GO:GO:0008270 GO:GO:0019897
GO:GO:0005516 Gene3D:3.30.40.10 InterPro:IPR017455
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
PROSITE:PS50178 eggNOG:NOG12793 GO:GO:0045022 GO:GO:0005769
GO:GO:0030742 GO:GO:0006906 EMBL:L40157 EMBL:X78998 EMBL:AC016136
EMBL:AC021646 EMBL:AC026111 IPI:IPI00329536 PIR:A57013
RefSeq:NP_003557.2 UniGene:Hs.567367 PDB:1HYI PDB:1HYJ PDB:1JOC
PDB:3MJH PDBsum:1HYI PDBsum:1HYJ PDBsum:1JOC PDBsum:3MJH
ProteinModelPortal:Q15075 SMR:Q15075 IntAct:Q15075
MINT:MINT-5004646 STRING:Q15075 PhosphoSite:Q15075 DMDM:229462866
PaxDb:Q15075 PRIDE:Q15075 DNASU:8411 Ensembl:ENST00000322349
GeneID:8411 KEGG:hsa:8411 UCSC:uc001tck.3 CTD:8411
GeneCards:GC12M093102 HGNC:HGNC:3185 HPA:CAB005861 HPA:CAB018782
HPA:HPA038158 HPA:HPA038159 MIM:605070 neXtProt:NX_Q15075
PharmGKB:PA27621 HOGENOM:HOG000112329 HOVERGEN:HBG039440
InParanoid:Q15075 KO:K12478 OMA:LKEQCKT OrthoDB:EOG4MSCXG
ChiTaRS:EEA1 EvolutionaryTrace:Q15075 GenomeRNAi:8411 NextBio:31490
PMAP-CutDB:Q15075 ArrayExpress:Q15075 Bgee:Q15075 CleanEx:HS_EEA1
Genevestigator:Q15075 GermOnline:ENSG00000102189 GO:GO:0005969
GO:GO:0016189 Uniprot:Q15075
Length = 1411
Score = 167 (63.8 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 174/890 (19%), Positives = 345/890 (38%)
Query: 85 KRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVN 144
K EES K +++ ++ L + + SE + V E E T++ +++
Sbjct: 324 KHNEES-VSKKNIQATLHQKDLDCQQLQSRLSASETSLHRIHVELSEKGEATQKLKEELS 382
Query: 145 NL-TQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRN 203
+ T++ Q EF +L + +E ++ H L+E +L +K
Sbjct: 383 EVETKY--QHLKAEFKQLQQQREEKEQHGLQLQSEINQLHSKLLETERQLGEAHGRLKEQ 440
Query: 204 GDTLNQLKALNVEQE-KDVERVRQRAE--LLEKVESMKKKLPWLKYDMKKAEYIXXXXXX 260
L+ K ++ EQ+ D++ R E L EKV + + L D K ++
Sbjct: 441 RQ-LSSEKLMDKEQQVADLQLKLSRLEEQLKEKVTNSTELQHQL--DKTKQQHQEQQALQ 497
Query: 261 XXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENSKRRMDFLEKVDQGV 320
N L + + I K Q+ L+ +K I+ K R D K+ G
Sbjct: 498 QSTTAKLREAQNDLEQVLRQIGDKDQKIQNLEALLQKSKENISLLEKEREDLYAKIQAG- 556
Query: 321 QVQGKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPAYEPPHDKIEKLGS----- 375
+G+ + + + A E HD++++ +
Sbjct: 557 --EGETAVLNQLQEKNHTLQEQVTQLTEKLKNQSESHKQ--AQENLHDQVQEQKAHLRAA 612
Query: 376 --QILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAEN 433
++L L N+ Q +E ++ ++Q + ++ ++ L E L+N +
Sbjct: 613 QDRVLSLETSVNELNSQLNESKEKVSQLDIQIKAKTELLLSAEAAKTAQRADLQN----H 668
Query: 434 IFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRA-HANYLEDHVGHYIWKSFITQDAGDRD 492
+ A LQ + ELNK + + ++ H + LE H+ Y K +++ + +
Sbjct: 669 LDTAQNALQDKQQELNKITTQLDQVTAKLQDKQEHCSQLESHLKEYKEK-YLSLEQKTEE 727
Query: 493 FLAKNLKPFDVPILNYVSNESSRKEPFQISEEMRALG--ISARLDQVFDAPHAVKEVLIS 550
L +K + L ++S+++ Q ++ R L + R ++ KE+ +S
Sbjct: 728 -LEGQIKKLEADSLEV---KASKEQALQDLQQQRQLNTDLELRATELSKQLEMEKEI-VS 782
Query: 551 QFGLD----SSYIGS-KETDQKADNVAKLGILDFWTPENHYRWSISRYGGHVSASVEPVN 605
LD S + S K+ K + K+ DF T + + +V +
Sbjct: 783 STRLDLQKKSEALESIKQKLTKQEEEKKILKQDFETLSQETKIQHEELNNRIQTTVTELQ 842
Query: 606 QSRLLLCSVDGNXXXXXXXXXXXXXXXXXXXXXXXXXMQTEQRLIEDEAAKLQKEREEII 665
+ ++ ++ Q + I D K KE + +
Sbjct: 843 KVKMEKEALMTELSTVKDKLSKVSDSLKNSKSEFEKENQKGKAAILD-LEKTCKELKHQL 901
Query: 666 NIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAADLNIQQFKYAIEIKN 725
VQ+E + + E +L K K S + + ++N+ +L+ QA + Q K +++
Sbjct: 902 Q-VQMENTLKEQKELKKSLEKEKEASHQLKLELNSMQEQLI-QAQNTLKQNEKEEQQLQG 959
Query: 726 LLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYEDCKKEVEHCRKH 785
+ E+ +K + +++ + KI L+ + KL Q + ++ E E
Sbjct: 960 NINELKQSS-EQKKKQIEALQGELKIAVLQ-KTELENKLQQQLTQAAQELAAEKEKISVL 1017
Query: 786 LSDAKRQAESIAFITPEL---EKEFL----EMPTTIEELEAAIQDNISQANSIFFLNQN- 837
++ ++ E+ + + E E L ++ + E+L A +D IS N I NQN
Sbjct: 1018 QNNYEKSQETFKQLQSDFYGRESELLATRQDLKSVEEKLSLAQEDLISNRNQIG--NQNK 1075
Query: 838 ILQEYEHRQRQIEDLSTKQEADKKELKRFLAEID---ALKEKWLPTLRNLVAQINETFSR 894
++QE + + +E S K+E +E + L +I +LKEK L ++ +A+I E R
Sbjct: 1076 LIQELKTAKATLEQDSAKKEQQLQERCKALQDIQKEKSLKEKELVNEKSKLAEIEEIKCR 1135
Query: 895 NFQEMAVAGEVSLDEHESDF--------DKFGILIKVKFRQSGQLEVLSA 936
+E+ E L H+ + D +LI+ K G+ + L A
Sbjct: 1136 QEKEITKLNE-ELKSHKLESIKEITNLKDAKQLLIQQKLELQGKADSLKA 1184
Score = 136 (52.9 bits), Expect = 5.2e-05, Sum P(3) = 5.2e-05
Identities = 61/257 (23%), Positives = 118/257 (45%)
Query: 643 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMEN-HINLRKRKLESIEKEDDINTA 701
+Q E+ L E E L E+ ++ I +I+ R+ +E+ + L+ KLESI++ ++ A
Sbjct: 1108 IQKEKSLKEKE---LVNEKSKLAEIEEIKCRQEKEITKLNEELKSHKLESIKEITNLKDA 1164
Query: 702 LAKLVDQAADLN--IQQFKYAIEIKNLLVEIVSCKWSYAEKHMAS--IEFDAK----IRE 753
L+ Q +L K A+E + +I+ + E+ + IE +AK I+E
Sbjct: 1165 KQLLIQQKLELQGKADSLKAAVEQEKRNQQILKDQVKKEEEELKKEFIEKEAKLHSEIKE 1224
Query: 754 LEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTT 813
E +K+HE+ + ++ ++ ++L K++ +S ELEK+ ++
Sbjct: 1225 KEVGMKKHEENEAKLTM-------QITALNENLGTVKKEWQSSQRRVSELEKQTDDLRGE 1277
Query: 814 IEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDAL 873
I LEA +Q+N + ++ E E Q ++ +L K + ++ E +L
Sbjct: 1278 IAVLEATVQNNQDERRALLERCLKGEGEIEKLQTKVLELQRKLDNTTAAVQELGRENQSL 1337
Query: 874 KEKWLPTLRNLVAQINE 890
+ K L A+ NE
Sbjct: 1338 QIKHTQALNRKWAEDNE 1354
Score = 59 (25.8 bits), Expect = 5.2e-05, Sum P(3) = 5.2e-05
Identities = 27/115 (23%), Positives = 56/115 (48%)
Query: 364 EPPHDKIEKLGSQ--ILELGVQA--NQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKN 419
E + K+E+ ++ + + +QA +QK L + + L+ ++ +L + L + +
Sbjct: 315 EQDYTKLEEKHNEESVSKKNIQATLHQKDLDCQQLQSRLSASETSLHRIHVELSEKGEAT 374
Query: 420 NKLLHALRN--SGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLE 472
KL L + +++ + LQQ R E KE +G + L+ + N+ H+ LE
Sbjct: 375 QKLKEELSEVETKYQHLKAEFKQLQQQREE--KEQHG-LQLQSEI-NQLHSKLLE 425
Score = 43 (20.2 bits), Expect = 5.2e-05, Sum P(3) = 5.2e-05
Identities = 10/44 (22%), Positives = 21/44 (47%)
Query: 273 TLHEFSKPIEGKKQEKAILDGDCKKLSSLINENSKRRMDFLEKV 316
T+ + + QE A+ + +KL S +NE +++ E +
Sbjct: 268 TISQLRSELAKGPQEVAVYVQELQKLKSSVNELTQKNQTLTENL 311
>ASPGD|ASPL0000008486 [details] [associations]
symbol:sudA species:162425 "Emericella nidulans"
[GO:0007059 "chromosome segregation" evidence=IMP] [GO:0000785
"chromatin" evidence=ISS] [GO:0007067 "mitosis" evidence=IGI;IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0008278
"cohesin complex" evidence=IEA] [GO:0007064 "mitotic sister
chromatid cohesion" evidence=IEA] InterPro:IPR010935 Pfam:PF06470
SMART:SM00968 InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524
GO:GO:0005634 GO:GO:0005694 GO:GO:0051301 GO:GO:0007067
EMBL:AACD01000107 EMBL:BN001301 GO:GO:0051276 eggNOG:COG1196
SUPFAM:SSF75553 HOGENOM:HOG000166512 KO:K06669 OMA:NKVLEHF
OrthoDB:EOG4TB7KF EMBL:U40146 PIR:S65799 RefSeq:XP_663968.1
ProteinModelPortal:Q00737 STRING:Q00737 GeneID:2871258
KEGG:ani:AN6364.2 Uniprot:Q00737
Length = 1215
Score = 115 (45.5 bits), Expect = 6.8e-08, Sum P(2) = 6.8e-08
Identities = 93/452 (20%), Positives = 181/452 (40%)
Query: 25 EIELHNFMTF-DHLICKPGS-RLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSIGA 82
+I + F ++ D + +P S + N+++G NGSGKS+ AI L LGR A
Sbjct: 5 QIIIQGFKSYKDQTVIEPFSPKHNVIVGRNGSGKSNFFAAIRFVLSDAYTHLGREER-QA 63
Query: 83 YVKRGEESG----YIKISL-----RGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVL 133
+ G S Y++I R T + L + R I + K E+ + K K +V+
Sbjct: 64 LLHEGSGSAVMSAYVEIIFDNSDERFPTGKPELVLRRTIGLK-KDEYTLDRKNATKNDVM 122
Query: 134 EITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKL 193
+ + +N +PQ RV + + L ++ G + ++ +
Sbjct: 123 NLLESAGFSRSNPYYIVPQGRVTALTNMKDSERLNLLKEVAGTQVYEARRAESLKIMHET 182
Query: 194 KTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAEY 253
+ + D +N+ A +E+EKD R Q EK + ++ L + Y ++ E
Sbjct: 183 NSKREKIDELLDFINERLA-ELEEEKDELRNFQ-----EK-DKERRCLEYTIYSREQQE- 234
Query: 254 IXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENSKRRMDFL 313
I ++ + I+G+K E A +D + I E K++++FL
Sbjct: 235 IASFLDSLEEQRQTGVEDTDINR-DRFIQGEK-EMAQVDAE-------IAE-CKQQIEFL 284
Query: 314 EKVDQGVQVQGKYKXXXXXXXXXXXXXXXI----LKARXXXXXXXXXXQTVP-AYEPPHD 368
KVD+ Q++ + + + A+ + V A E
Sbjct: 285 -KVDKA-QLEDERREASKALAQVELQAKSLSDNQAAAQESKARHDESLKAVQSAIEERQT 342
Query: 369 KIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQC-SDRLKDMEDKNNKLLHALR 427
++++L + + + R + +E E + +L +Q + R K+ +++ L ++
Sbjct: 343 ELKELVPRFISAKDAEDAARAKLTEAETA--RQRLYAKQGRNSRFKNKSERDKWLQAEIK 400
Query: 428 NSGAENIFEAYCWLQQHRHELNKEAYGPVLLE 459
N+ A +I L Q + ++N LLE
Sbjct: 401 NNNA-SISSVQSVLSQTQEDINDIENDIALLE 431
Score = 103 (41.3 bits), Expect = 6.8e-08, Sum P(2) = 6.8e-08
Identities = 42/174 (24%), Positives = 75/174 (43%)
Query: 840 QEYEHRQRQIEDLST-----KQEADKKELKRFLAEIDALKEKWLPTLRN-LVAQINETFS 893
+E + Q+ I+DL + K EA ++ K+ E + EK +P R L+ Q +T
Sbjct: 1011 EELDASQKSIDDLISVLDHRKDEAIERTFKQVSREFATIFEKLVPAGRGRLIIQ-RKTDR 1069
Query: 894 RNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVLSAHHQSGGERSVSTILYLV 953
E + E +H + + G+ I V F + SGG++S+ + +
Sbjct: 1070 TQRAEDDLESEDEEAKHSVE-NYVGVGISVSFNSKHD-DQQRIQQLSGGQKSLCALALVF 1127
Query: 954 SLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTPQ--CFLLTPKLL 1005
++Q PF + DEI+ +D R Q+++ S Q C P++L
Sbjct: 1128 AIQACDPAPFYLFDEIDANLDA-QYRTAVAQMLKTISDSTNGQFICTTFRPEML 1180
Score = 96 (38.9 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 55/273 (20%), Positives = 123/273 (45%)
Query: 649 LIEDEAAKLQKEREEIINIVQIEKRKRREME---NHINLRKRKLESIEKEDDINTALAKL 705
L ++E A+L E + + VQ +R+ +E+ + + RK LE +E +++N L +L
Sbjct: 795 LTDEEEARL----ESLNSNVQEYRREYQELSGKRSELETRKSVLE-VELRENLNPRLDQL 849
Query: 706 VDQAADL-------NIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIREL-EFN 757
+ Q AD+ NI++ + E K L + A+ + + ++++ EL + N
Sbjct: 850 LAQDADIADEDGQGNIKETQR--EQKRLTKVLDKLAQRLAQVDESMEQANSRVTELTQRN 907
Query: 758 LKQH---EKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTI 814
+ E+LA H +K ++ A A +I + ++ F + T
Sbjct: 908 AESRRELEELAKSIEKHQRRMEKSMQKKAALTKQAAECAANIRDLGVLPDEAFTKYKNTD 967
Query: 815 EELEAAIQDNISQANSIF-FLNQNILQEYEHRQRQIEDLSTKQE---ADKKELKRFLAEI 870
+++A + +N+ ++Y + +Q E L++++E A +K + ++ +
Sbjct: 968 SNTVVKKLHKVNEALKKYAHVNKKAFEQYNNFTKQRETLTSRREELDASQKSIDDLISVL 1027
Query: 871 DALKEKWLPTLRNLVAQINETFSRNFQEMAVAG 903
D K++ + Q++ F+ F+++ AG
Sbjct: 1028 DHRKDE---AIERTFKQVSREFATIFEKLVPAG 1057
Score = 65 (27.9 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 51/227 (22%), Positives = 95/227 (41%)
Query: 647 QRLIE-DEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKL 705
QRL + DE+ +++ + + Q RRE+E L K SIEK + K
Sbjct: 884 QRLAQVDES--MEQANSRVTELTQRNAESRRELEE---LAK----SIEKHQ---RRMEKS 931
Query: 706 VDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLA 765
+ + A L Q + A I++L V Y K+ S K+ ++ LK++ +
Sbjct: 932 MQKKAALTKQAAECAANIRDLGVLPDEAFTKY--KNTDSNTVVKKLHKVNEALKKYAHVN 989
Query: 766 LQASLHYEDCKKEVEHC---RKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELE-AAI 821
+A Y + K+ E R+ L +++ + + + + E +E E A I
Sbjct: 990 KKAFEQYNNFTKQRETLTSRREELDASQKSIDDLISVLDHRKDEAIERTFKQVSREFATI 1049
Query: 822 QDNISQANSIFFLNQNILQEYEHR-QRQIEDLSTKQEADKKELKRFL 867
+ + A + I+Q R QR +DL ++ E K ++ ++
Sbjct: 1050 FEKLVPAGR----GRLIIQRKTDRTQRAEDDLESEDEEAKHSVENYV 1092
>DICTYBASE|DDB_G0291752 [details] [associations]
symbol:smc1 "structural maintenance of chromosome
protein" species:44689 "Dictyostelium discoideum" [GO:0051276
"chromosome organization" evidence=IEA] [GO:0030261 "chromosome
condensation" evidence=IEA] [GO:0007062 "sister chromatid cohesion"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0005694 "chromosome"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=ISS] [GO:0042770
"signal transduction in response to DNA damage" evidence=ISS]
[GO:0008280 "cohesin core heterodimer" evidence=ISS] [GO:0007064
"mitotic sister chromatid cohesion" evidence=ISS] [GO:0007052
"mitotic spindle organization" evidence=ISS] [GO:0003777
"microtubule motor activity" evidence=ISS] [GO:0003682 "chromatin
binding" evidence=ISS] [GO:0000075 "cell cycle checkpoint"
evidence=ISS] [GO:0000070 "mitotic sister chromatid segregation"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR024704
InterPro:IPR010935 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 dictyBase:DDB_G0291752 Pfam:PF02463
GO:GO:0005524 GO:GO:0005634 GenomeReviews:CM000155_GR GO:GO:0007052
GO:GO:0006281 GO:GO:0003682 EMBL:AAFI02000182 GO:GO:0042770
GO:GO:0006310 GO:GO:0046982 GO:GO:0030261 GO:GO:0003777
GO:GO:0000075 GO:GO:0007064 eggNOG:COG1196 SUPFAM:SSF75553
GO:GO:0008280 KO:K06636 OMA:NALVCET RefSeq:XP_629977.1
ProteinModelPortal:Q54E85 STRING:Q54E85 EnsemblProtists:DDB0219931
GeneID:8628307 KEGG:ddi:DDB_G0291752 InParanoid:Q54E85
Uniprot:Q54E85
Length = 1373
Score = 114 (45.2 bits), Expect = 8.5e-08, Sum P(4) = 8.5e-08
Identities = 52/238 (21%), Positives = 108/238 (45%)
Query: 773 EDCKKEVEHC--RKHLSDAKRQAESIAFITPELEKE-FLEMPTTIEELEAAIQDNISQAN 829
+D K++ + + D SI F L+K F++ T E L D +
Sbjct: 1068 QDIIKDITQAMVQDDILDIYEDEASIKFNYSSLKKRVFVDQKTYEEYLRKLTIDIETIGK 1127
Query: 830 SIFFLNQNILQEYEH------RQRQI-EDLSTKQEADKKELKRFLAEIDALKEKWLPTLR 882
+ + N + YEH + +++ ++L+ ++ K ++ F D K+ +L +
Sbjct: 1128 EMKRVMPNY-KAYEHLVDVSDKLKKVRKELNQARDNAKTKIDSFNRVRDQRKQLFLRAFK 1186
Query: 883 NLVAQINETFSRNFQEMAV-----AGEVSLDEHESDFD---KFGILIKVK-FRQSGQLEV 933
+ + +S +E+ + ++L++ E+ F+ +F ++ K F++ QL
Sbjct: 1187 RIAKNLTSIYSELTRELEPPYHRGSAHLALEDTENPFNSGVRFTVIPPNKRFQEMDQL-- 1244
Query: 934 LSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQ 991
SGGE+SV+ + +L S L + PF ++DEI+ D +N K+ + + AS+
Sbjct: 1245 ------SGGEKSVAALAFLFSTHGLKSTPFMILDEIDAAFDSVNVLKLVRYVRHKASK 1296
Score = 112 (44.5 bits), Expect = 8.5e-08, Sum P(4) = 8.5e-08
Identities = 52/226 (23%), Positives = 98/226 (43%)
Query: 26 IELHNFMTFD-HLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSIGAYV 84
+++ NF ++ + + P + VIGPNG GKS+++ AI LG ++ + R+T + V
Sbjct: 6 LKIQNFKSYKGNPLIGPFKDFSCVIGPNGRGKSNIMDAIIFVLGHNSSQI-RSTKLNELV 64
Query: 85 KR-----------GEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVL 133
G+ S Y+ I+ + + + RKI N S++FF V +
Sbjct: 65 NTHIVTDKNNNEGGDNSTYVAINF--NHQGNNYRFSRKI-IGNGSQYFFEQTQVSAEQYQ 121
Query: 134 EITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKL 193
+ K I + F+ Q V A +P ++ + G L ++ L+ + SK
Sbjct: 122 KHLKDIGIDIGTKNFFVFQGDVESIATQNPKQISAFIDDISGSRALKFEYDRLLGEKSKC 181
Query: 194 KTIECTVKRNGDTLNQLKALNVEQEKDV-ERVRQRAELLEKVESMK 238
+ T+ A EQ K+ V++ + ++V+S+K
Sbjct: 182 EDDVFASYAKRKTI----AFEKEQYKEQWTEVKEYQSMQDRVDSLK 223
Score = 89 (36.4 bits), Expect = 4.6e-05, Sum P(3) = 4.6e-05
Identities = 47/255 (18%), Positives = 112/255 (43%)
Query: 648 RLIEDEAAKLQKE---REEIINIVQIEKRKRREMENHINLRKRKLESIEK-EDDINTALA 703
RLI+ + K + EEI I + K+ + + N R ++++ I++ +++N
Sbjct: 290 RLIKGKKKKGSDQYSAEEEIKYISEKIKKTKLILSKAENSRSKQIQEIDQLRNELNEFTE 349
Query: 704 KLVDQAADLNIQQFKYAIEIKNLLVEIVS-CKW-SYAEKHMASIEFDAKIRELEFNLKQH 761
+L + + + + +I++ + +E + K S E I++D RE + QH
Sbjct: 350 QLENLDDEKEVAETGLSIKMDHQQIEEYNQLKLQSGKETSGLKIKYDQLSREHKIEQDQH 409
Query: 762 EKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAI 821
++L + +E KK+ + ++ + K +S F ++ ++E E +
Sbjct: 410 QQLTYRLE-EFETMKKKFQESKEKFQNQKDIEQS----------NFQDLEQKLKESEKEL 458
Query: 822 QDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTL 881
++ N QN+ + E Q + DL + + +++ ++F ++ LK + P +
Sbjct: 459 VQCTTRFNETQQRQQNLNNDLERIQYSLSDLKSLKSESQRD-RQFNQTVETLKSIF-PGV 516
Query: 882 RNLVAQINETFSRNF 896
+ + + E R +
Sbjct: 517 KGKLMDLCEPSQRKY 531
Score = 78 (32.5 bits), Expect = 0.00026, Sum P(4) = 0.00026
Identities = 54/236 (22%), Positives = 104/236 (44%)
Query: 649 LIEDEAAKLQKE---REEIINIVQIEKRKRREMENHINLRKRKLESIEKE-DDIN----T 700
L+ D K Q+E E++IN I + E+ + RK +L+ ++ E + I +
Sbjct: 729 LLNDRLKKNQQELETNEKVINETIIPELS--ELNETLAKRKTQLDQLQSEINSIEERYFS 786
Query: 701 ALAKL--VD---QAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELE 755
+K VD + D + + + I+ + L E +S S + E D +I++L
Sbjct: 787 GFSKKFGVDNIREYEDNRLAKIQENIQKRLSLTESISVIQSRLDYEQGR-EIDNEIKQLS 845
Query: 756 FNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDA-------KRQAESIAFITPELEKE-- 806
L +EK+ Q H ++ ++ + +++LSD K Q + + +L+K+
Sbjct: 846 EELNANEKILDQELEHKKENDEKEKQFKENLSDLQKQHTEKKSQLDKMNITIKDLKKQLS 905
Query: 807 -FLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTK-QEADK 860
F T IE+L NI++ ++ IL E + ++ L K +E D+
Sbjct: 906 TFNNQITDIEKLSNRHDFNITKLRGVY---HQILIETRNEDIRLPILQFKGKEIDQ 958
Score = 47 (21.6 bits), Expect = 8.5e-08, Sum P(4) = 8.5e-08
Identities = 11/41 (26%), Positives = 23/41 (56%)
Query: 385 NQKRLQKS---EKEKILNQNKLTLRQCSDRLKDMEDKNNKL 422
NQK +++S + E+ L +++ L QC+ R + + + L
Sbjct: 435 NQKDIEQSNFQDLEQKLKESEKELVQCTTRFNETQQRQQNL 475
Score = 43 (20.2 bits), Expect = 2.1e-07, Sum P(4) = 2.1e-07
Identities = 24/95 (25%), Positives = 39/95 (41%)
Query: 371 EKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRN-- 428
E+L + L + K+ + EKEK +N L++ K DK N + L+
Sbjct: 846 EELNANEKILDQELEHKK-ENDEKEKQFKENLSDLQKQHTEKKSQLDKMNITIKDLKKQL 904
Query: 429 SGAENIFEAYCWLQQHRHELN----KEAYGPVLLE 459
S N L +RH+ N + Y +L+E
Sbjct: 905 STFNNQITDIEKLS-NRHDFNITKLRGVYHQILIE 938
Score = 41 (19.5 bits), Expect = 3.3e-07, Sum P(4) = 3.3e-07
Identities = 13/56 (23%), Positives = 29/56 (51%)
Query: 368 DKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLL 423
D+ ++L ++ E + +K+ Q+S KEK NQ + D + +++ +L+
Sbjct: 407 DQHQQLTYRLEEF--ETMKKKFQES-KEKFQNQKDIEQSNFQDLEQKLKESEKELV 459
Score = 40 (19.1 bits), Expect = 9.4e-08, Sum P(3) = 9.4e-08
Identities = 10/37 (27%), Positives = 19/37 (51%)
Query: 291 LDGDCKKLSSLINENSKRRMDFLEKVDQGVQVQGKYK 327
+D + K+LS +N N K LE + + + ++K
Sbjct: 837 IDNEIKQLSEELNANEKILDQELEHKKENDEKEKQFK 873
Score = 39 (18.8 bits), Expect = 5.1e-07, Sum P(4) = 5.1e-07
Identities = 13/60 (21%), Positives = 30/60 (50%)
Query: 363 YEPPHDKIEKLGSQIL-ELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNK 421
++ +D+ EK + L +L Q +K+ Q + + K L ++++ D+E +N+
Sbjct: 861 HKKENDEKEKQFKENLSDLQKQHTEKKSQLDKMNITIKDLKKQLSTFNNQITDIEKLSNR 920
Score = 38 (18.4 bits), Expect = 8.5e-08, Sum P(4) = 8.5e-08
Identities = 10/37 (27%), Positives = 18/37 (48%)
Query: 282 EGKKQEKAILDGDCKKLSSLINENSKRRMDFLEKVDQ 318
E K+Q ++I + K L + SK + ++V Q
Sbjct: 247 ESKQQIQSIQSDEMKPLEQQYTQTSKNQASLHKEVVQ 283
>UNIPROTKB|F1NCD4 [details] [associations]
symbol:MYH9 "Myosin-9" species:9031 "Gallus gallus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000146 "microfilament
motor activity" evidence=IEA] [GO:0000212 "meiotic spindle
organization" evidence=IEA] [GO:0000910 "cytokinesis" evidence=IEA]
[GO:0001525 "angiogenesis" evidence=IEA] [GO:0001701 "in utero
embryonic development" evidence=IEA] [GO:0001726 "ruffle"
evidence=IEA] [GO:0001768 "establishment of T cell polarity"
evidence=IEA] [GO:0001772 "immunological synapse" evidence=IEA]
[GO:0001931 "uropod" evidence=IEA] [GO:0003779 "actin binding"
evidence=IEA] [GO:0005819 "spindle" evidence=IEA] [GO:0005826
"actomyosin contractile ring" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005913 "cell-cell adherens junction"
evidence=IEA] [GO:0006509 "membrane protein ectodomain proteolysis"
evidence=IEA] [GO:0007132 "meiotic metaphase I" evidence=IEA]
[GO:0007520 "myoblast fusion" evidence=IEA] [GO:0008180
"signalosome" evidence=IEA] [GO:0008305 "integrin complex"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016337 "cell-cell adhesion" evidence=IEA] [GO:0016460 "myosin
II complex" evidence=IEA] [GO:0030048 "actin filament-based
movement" evidence=IEA] [GO:0030220 "platelet formation"
evidence=IEA] [GO:0030224 "monocyte differentiation" evidence=IEA]
[GO:0030863 "cortical cytoskeleton" evidence=IEA] [GO:0030898
"actin-dependent ATPase activity" evidence=IEA] [GO:0031532 "actin
cytoskeleton reorganization" evidence=IEA] [GO:0031594
"neuromuscular junction" evidence=IEA] [GO:0032154 "cleavage
furrow" evidence=IEA] [GO:0032796 "uropod organization"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0043495 "protein anchor" evidence=IEA]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0043534 "blood vessel
endothelial cell migration" evidence=IEA] [GO:0051295
"establishment of meiotic spindle localization" evidence=IEA]
InterPro:IPR000048 InterPro:IPR001609 InterPro:IPR002928
Pfam:PF00063 Pfam:PF00612 Pfam:PF01576 PROSITE:PS50096
SMART:SM00015 SMART:SM00242 GO:GO:0005829 GO:GO:0005524
GO:GO:0005819 GO:GO:0008360 GO:GO:0030863 GO:GO:0015031
GO:GO:0031594 GO:GO:0043531 GO:GO:0005913 GO:GO:0000910
GO:GO:0031532 GO:GO:0000146 GO:GO:0001725 GO:GO:0001726
GO:GO:0016337 GO:GO:0005826 GO:GO:0006509 GO:GO:0043534
GO:GO:0008180 GO:GO:0032154 GO:GO:0030048 GO:GO:0051295
GO:GO:0001772 GO:GO:0001768 GO:GO:0007132 GO:GO:0032796
GO:GO:0001931 GO:GO:0000212 GO:GO:0008305 GO:GO:0016460
GO:GO:0030898 GeneTree:ENSGT00650000092896 IPI:IPI00572165
OMA:EMRQKHS EMBL:AADN02006228 EMBL:AADN02006229
Ensembl:ENSGALT00000020472 Uniprot:F1NCD4
Length = 1335
Score = 140 (54.3 bits), Expect = 0.00041, Sum P(3) = 0.00041
Identities = 59/231 (25%), Positives = 105/231 (45%)
Query: 645 TEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRK--RKLESIEKEDDINTAL 702
TE+ AKL+ + E +I +E+R RRE + L K RKLE D++ +
Sbjct: 384 TEEEEKSKSLAKLKNKHEAMIT--DLEERLRREEKQRQELEKTRRKLEG--DSSDLHDQI 439
Query: 703 AKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMA--SI-EFDAKIRELEFNLK 759
A+L Q A+L IQ K E++ L + A+K+MA I E +++I EL+ +L+
Sbjct: 440 AELQAQIAELKIQLSKKEEELQAALARVEE---EAAQKNMALKKIRELESQITELQEDLE 496
Query: 760 QHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEA 819
+A D +E+E + L D + + + E+E + T+E+ EA
Sbjct: 497 SERASRNKAEKQKRDLGEELEALKTELEDTLDSTAAQQELRSKREQEVTVLKKTLED-EA 555
Query: 820 AIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEI 870
+ +Q + + ++E + Q + + E K+ L+ AE+
Sbjct: 556 KTHE--AQIQEMRQKHSQAIEELAEQLEQTKRVKANLEKAKQALESERAEL 604
Score = 119 (46.9 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 65/251 (25%), Positives = 122/251 (48%)
Query: 651 EDEAAKLQKEREEIINIVQIE-KRKRREMENHINLRKR-KLESIEKEDDINTALAKLVDQ 708
E++ +L ++ E+ V++E +RK+R + + RK+ +L+ + E I+TA K D+
Sbjct: 956 EEKRKQLIRQVREME--VELEDERKQRSIA--VAARKKLELDLKDLESHIDTA-NKNRDE 1010
Query: 709 AADLNIQQF-KYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQ-HEKLAL 766
A I+Q K ++K+ + E+ + S E + E + K++ +E + Q E+LA
Sbjct: 1011 A----IKQLRKLQAQMKDYMRELEDTRTSREEILAQAKENEKKLKSMEAEMIQLQEELAA 1066
Query: 767 QASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPE----LEKEFLEMPTTIEELEA--- 819
E K++ + R L+D + + E LE ++ +EE +
Sbjct: 1067 A-----ERAKRQAQQERDELADEIANSSGKGALAMEEKRRLEARIAQLEEELEEEQGNTE 1121
Query: 820 AIQDNISQAN-SIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEID-ALKEKW 877
I D + +AN I +N ++ E + Q+ E+ + E KELK L E++ A+K K+
Sbjct: 1122 IINDRLKKANLQIDQMNADLNAERSNAQKN-ENARQQMERQNKELKLKLQEMESAVKSKY 1180
Query: 878 LPTLRNLVAQI 888
T+ L A+I
Sbjct: 1181 KATITALEAKI 1191
Score = 98 (39.6 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 69/349 (19%), Positives = 144/349 (41%)
Query: 85 KRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEW--FFNGKVVPKGEVLEITKRFNIQ 142
+R E S +K+ L+G EH +K+D + + F G+ V K E+ E + ++
Sbjct: 600 ERAELSNEVKVLLQGKGDAEHKR--KKVDAQLQELQVKFTEGERV-KTELAERVNKLQVE 656
Query: 143 VNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLK-TIECTVK 201
++N+T L Q + KL+ K E + D Q L+++ ++LK + +K
Sbjct: 657 LDNVTGLLNQSD-SKSIKLA--KDFSALESQLQDTQ------ELLQEETRLKLSFSTKLK 707
Query: 202 RNGDTLNQLKALNVEQEKDVER-VRQRAELLEK--VESMKKK---LPWLKY-DMKKAEYI 254
+ D N LK +E+E++ +R + ++ +L++ VE+ KK L L+ + K +
Sbjct: 708 QTEDEKNALKE-QLEEEEEAKRNLEKQISVLQQQAVEARKKMDDGLGCLEIAEEAKKKLQ 766
Query: 255 XXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAI-LDGDCKKLSSLINENSKRRMDFL 313
+ L + ++ + + A+ LD + +S+L E +++ D L
Sbjct: 767 KDLESLTQRYEEKIAAYDKLEKTKTRLQQELDDIAVDLDHQRQTVSNL--EKKQKKFDQL 824
Query: 314 EKVDQGVQVQGKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPAYEPPHDKIEKL 373
++ + + + + AR + + ++E L
Sbjct: 825 LAEEKNISAKYAEERDRAEAEAREKETKALSLARALEEAIEQKAELERVNKQFRTEMEDL 884
Query: 374 GSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKL 422
S ++G ++ K E+ + + K L + D L+ ED +L
Sbjct: 885 MSSKDDVGKSVHELEKAKRALEQQVEEMKTQLEELEDELQATEDAKLRL 933
Score = 89 (36.4 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 46/217 (21%), Positives = 97/217 (44%)
Query: 654 AAKLQKEREEIINIVQIEKRKRREMENH--IN--LRKRKLESIEKEDDINTALAKLVDQA 709
A ++++R I Q+E+ E N IN L+K L+ + D+N A+ +
Sbjct: 1093 ALAMEEKRRLEARIAQLEEELEEEQGNTEIINDRLKKANLQIDQMNADLN---AERSNAQ 1149
Query: 710 ADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIE-FDAKIRELEFNLKQHEKLALQA 768
+ N +Q + + K L +++ + + K+ A+I +AKI +LE L K A
Sbjct: 1150 KNENARQ-QMERQNKELKLKLQEMESAVKSKYKATITALEAKIVQLEEQLDMETKERQAA 1208
Query: 769 SLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQA 828
S +K+++ + D +R AE + +K + + +LE A ++ +A
Sbjct: 1209 SKQVRRAEKKLKDILLQVDDERRNAEQFK---DQADKANMRLKQLKRQLEEA-EEEAQRA 1264
Query: 829 NSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKR 865
N+ + + +E + + ++ + + K +L+R
Sbjct: 1265 NAS---RRKLQRELDDATETADAMNREVSSLKSKLRR 1298
Score = 87 (35.7 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 56/240 (23%), Positives = 106/240 (44%)
Query: 653 EAAKLQKEREEIINIV-QIEKRKRREMENHINLRKRKLESIEKEDDIN-TALAKL---VD 707
E L ++++ V ++EK KR +E + K +LE E ED++ T AKL V+
Sbjct: 880 EMEDLMSSKDDVGKSVHELEKAKRA-LEQQVEEMKTQLE--ELEDELQATEDAKLRLEVN 936
Query: 708 QAA-------DLNIQQFKYAIEIKNLLVEIVSCKWSYA-EKHMASIEFDAKIRELEFNLK 759
Q A DL + + + K L+ ++ + E+ SI A+ ++LE +LK
Sbjct: 937 QQAMKAQFDRDLLGRDEQNEEKRKQLIRQVREMEVELEDERKQRSIAVAAR-KKLELDLK 995
Query: 760 QHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEA 819
E A+ + ++ K++ + + D R+ E E+ + E ++ +EA
Sbjct: 996 DLESHIDTANKNRDEAIKQLRKLQAQMKDYMRELEDTRTSREEILAQAKENEKKLKSMEA 1055
Query: 820 A---IQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEK 876
+Q+ ++ A + QE + +I + S K +E +R A I L+E+
Sbjct: 1056 EMIQLQEELAAAERA---KRQAQQERDELADEIANSSGKGALAMEEKRRLEARIAQLEEE 1112
Score = 48 (22.0 bits), Expect = 0.00041, Sum P(3) = 0.00041
Identities = 14/47 (29%), Positives = 26/47 (55%)
Query: 376 QILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKL 422
Q LE ++ + QK + EK+ + KL ++ + + +ED+N KL
Sbjct: 321 QELEEQLEEEESARQKLQLEKVTTEAKL--KKLEEDVIVLEDQNLKL 365
Score = 40 (19.1 bits), Expect = 0.00041, Sum P(3) = 0.00041
Identities = 13/64 (20%), Positives = 32/64 (50%)
Query: 188 EKSSKLKTIECTVKRNGDTLNQLKA-LNVEQEKDVERVRQRAELLEKVESMKKKLPWLKY 246
E+ K+K + + + +A L E+ + E+++ AEL + E ++ +L K
Sbjct: 227 EELIKVKEKQLAAENRLSEMETFQAQLMAEKMQLQEQLQAEAELCAEAEEIRARLTAKKQ 286
Query: 247 DMKK 250
++++
Sbjct: 287 ELEE 290
>ASPGD|ASPL0000075987 [details] [associations]
symbol:AN4597 species:162425 "Emericella nidulans"
[GO:0003917 "DNA topoisomerase type I activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006265 "DNA
topological change" evidence=IEA] [GO:0034613 "cellular protein
localization" evidence=IEA] [GO:0007076 "mitotic chromosome
condensation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000796 "condensin complex" evidence=IEA] [GO:0000939
"condensed chromosome inner kinetochore" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0005694
GO:GO:0006281 GO:GO:0006310 GO:GO:0030261 EMBL:BN001303
EMBL:AACD01000079 GO:GO:0007062 eggNOG:COG1196 KO:K06675
SUPFAM:SSF75553 OMA:IAIEFLT HOGENOM:HOG000184777 OrthoDB:EOG4WM82V
RefSeq:XP_662201.1 ProteinModelPortal:Q5B4D3 STRING:Q5B4D3
EnsemblFungi:CADANIAT00005839 GeneID:2872396 KEGG:ani:AN4597.2
Uniprot:Q5B4D3
Length = 1476
Score = 124 (48.7 bits), Expect = 1.1e-07, Sum P(3) = 1.1e-07
Identities = 72/333 (21%), Positives = 145/333 (43%)
Query: 649 LIEDEAAKLQKEREEIINIVQIEKRKRREMENHI-NLRK--RKL-ESIEKEDDINTALAK 704
L+ +E + + R + +++ + R E E + N+ + +KL E + + + + +
Sbjct: 1075 LLSEEISNAEVARSKNEKLIKKHENARAEAEKELANVAEELQKLNEDVANQANDASGWKE 1134
Query: 705 LVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKL 764
VD+A D + K A E+K + E+ E IE K+ E + L ++EK
Sbjct: 1135 KVDEAQDA--LESKKA-ELKTMKAELDEKVAELNETRATEIEMRNKLEENQKALAENEK- 1190
Query: 765 ALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEM-PTTIEELEAAIQD 823
S ++++ K + +++SD + F T + E EM +++ AA+++
Sbjct: 1191 ---RSRYWQE--KLSKLTLQNISDLGEDQQPSEFQT-FTKDELAEMNKDSLKAAIAALEE 1244
Query: 824 NISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRN 883
+Q +SI + ++++EY R + E S + +D L+ L
Sbjct: 1245 K-TQNSSI---DLSVIEEYRRRAAEHESRSADLATALAARDSAKSRLDGLRSARLNGFME 1300
Query: 884 LVAQINETFSRNFQEMAVAGEVSLDEHESDFDKF--GILIKVKFRQSGQLEVLSAHHQSG 941
I+ +Q + + G L+ +S D F GIL V + + + SG
Sbjct: 1301 GFGIISLRLKEMYQMITMGGNAELELVDS-LDPFSEGILFSVMPPKKSWKNI---GNLSG 1356
Query: 942 GERSVSTILYLVSLQDLTNCPFRVVDEINQGMD 974
GE+++S++ + +L P V+DEI+ +D
Sbjct: 1357 GEKTLSSLALVFALHHYKPTPLYVMDEIDAALD 1389
Score = 100 (40.3 bits), Expect = 1.1e-07, Sum P(3) = 1.1e-07
Identities = 58/247 (23%), Positives = 102/247 (41%)
Query: 23 IIEIELHNFMTF-DHLICKP-GSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI 80
I + L+NF ++ + P + + V+GPNGSGKS+++ A+ G + R I
Sbjct: 247 ITTLVLNNFKSYAGKQVVGPFHASFSSVVGPNGSGKSNVIDALLFVFGFRASKM-RQGKI 305
Query: 81 GAYVKRG---------EESGYIK--ISLRGDTKE----EHLTIMRKIDTRNKSEWFFNGK 125
A + E Y + I L G E L I RK N S+++ NGK
Sbjct: 306 SALIHNSANHPNLPFCEVEVYFQEIIDLPGGEHEVVPDSQLIISRKAFKNNTSKYYMNGK 365
Query: 126 VVPKGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCA 185
V + + I +++ + Q V A++ P K E E + +++
Sbjct: 366 ETNFTAVTTLLRDRGIDLDHKRFLILQGEVESIAQMKP-KAANEHEDGL------LEYLE 418
Query: 186 LVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLK 245
+ +SK K ++ L L + VE+ V+ V + L V+ K L +L+
Sbjct: 419 DIIGTSKYKQ---PIEEAATELEALNDVCVEKNNRVQHVEKEKNAL--VDKKDKALAYLR 473
Query: 246 YDMKKAE 252
+ + A+
Sbjct: 474 DENELAQ 480
Score = 85 (35.0 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 76/342 (22%), Positives = 145/342 (42%)
Query: 653 EAAKLQKEREEIINIVQIEKRKRRE--MENHINLRKRKLESIEKEDDINTALAKLVDQAA 710
E A LQ + E++N+ ++EK + E ++ KR ++ E+ + LAK + A
Sbjct: 501 EEAILQMQ--ELLNL-ELEKHEGNESGIKELEKAYKRAMKEYERMEKETQELAKGM---A 554
Query: 711 DLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASL 770
+ + K+ E K LV K EK M S A E + +K+H + S
Sbjct: 555 KYDKETVKFE-EKKKFLVG----KQKKLEKAMTSARLAAS--ECQSLVKRHSEAIENKSK 607
Query: 771 HYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAI---QDNISQ 827
D + EVEH + L+ + ES+ T L + ++E + I Q ++
Sbjct: 608 ETADYENEVEHEEQELTKIR---ESLKGKTQGLSDQIAAKQKSLEPWDEKINKKQSELAV 664
Query: 828 ANS-IFFLNQN------ILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPT 880
A S + L + +L+E + + IE+ ++E D +E K + ++ E+
Sbjct: 665 AQSELDILKEKSNAGAVLLEEAQSKITSIEETIARKEEDLQECKTQRSTLEDEVEQLQHD 724
Query: 881 LRNLVAQINETFSR--NFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVLSAHH 938
L+ + + + N ++ A ++ ++ L+++K +SG++E H
Sbjct: 725 LKKYSMKEPDVRAHVSNARQKAEEARATVASTQNRGSVLTGLMRLK--ESGRIE--GFHG 780
Query: 939 QSGGERSVSTILYLVSLQDLTNCPF---RVVDEINQGMDPIN 977
+ G ++ Y V++ T CP VVD + G I+
Sbjct: 781 RLGNLGTIDE-KYDVAIS--TACPALENMVVDTVEVGQQCID 819
Score = 57 (25.1 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 30/124 (24%), Positives = 57/124 (45%)
Query: 112 IDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSP--VKL-LE 168
I+ ++K + +V + E E+TK + TQ L + L P K+ +
Sbjct: 602 IENKSKETADYENEV--EHEEQELTK-IRESLKGKTQGLSDQIAAKQKSLEPWDEKINKK 658
Query: 169 ETEKAVGDPQLPVQH------CALVEKS-SKLKTIECTVKRNGDTLNQLKALNVEQEKDV 221
++E AV +L + L+E++ SK+ +IE T+ R + L + K E +V
Sbjct: 659 QSELAVAQSELDILKEKSNAGAVLLEEAQSKITSIEETIARKEEDLQECKTQRSTLEDEV 718
Query: 222 ERVR 225
E+++
Sbjct: 719 EQLQ 722
Score = 42 (19.8 bits), Expect = 1.1e-07, Sum P(3) = 1.1e-07
Identities = 8/33 (24%), Positives = 19/33 (57%)
Query: 395 EKILNQNKLTLRQCSDRLKDMEDKNNKLLHALR 427
E+ + + + L++C + +ED+ +L H L+
Sbjct: 694 EETIARKEEDLQECKTQRSTLEDEVEQLQHDLK 726
>UNIPROTKB|E2QUU0 [details] [associations]
symbol:TRIP11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000042 "protein targeting
to Golgi" evidence=IEA] InterPro:IPR000237 PROSITE:PS50913
GO:GO:0005634 GO:GO:0005794 GeneTree:ENSGT00700000104188
GO:GO:0000042 CTD:9321 EMBL:AAEX03005581 RefSeq:XP_537351.2
Ensembl:ENSCAFT00000017298 GeneID:480228 KEGG:cfa:480228
OMA:LESEVDH Uniprot:E2QUU0
Length = 1977
Score = 135 (52.6 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 72/363 (19%), Positives = 157/363 (43%)
Query: 650 IEDEAAKLQKEREEIINIVQIEKRKRREMENHI-NLRKRKLESIEKEDDINTALAKLVD- 707
++++ K Q+ER++++ ++ ++ + ++N + +LR ++L ++ + + L + D
Sbjct: 1533 MQEKTVKFQQERDQVMLALKQKQMENSALQNEVQHLRDKELRLNQELERLRNHLLESEDS 1592
Query: 708 ---QAADLNIQQFKYAIEIKNLLVEIVSCKWSYAE-KHMASIEFDAKIRELEFNLKQHEK 763
+A ++ K ++ L ++VS + H AS++ ++ +L KQ ++
Sbjct: 1593 YTREALAAEEREAKLRRKVTVLEEKLVSSSNAMENASHQASLQVESLQEQLNVVSKQRDE 1652
Query: 764 LALQASLHYEDCKK-EVEHCRKHLSDAKRQAESIAFITPELEKE---FLEMPTTIEELEA 819
ALQ S+ E K+ + + Q E A + ELEK E E LE
Sbjct: 1653 TALQLSVSREQVKQYALSLSNLQMVLEHFQQEEKAVYSAELEKHKQLVAEWKKKAENLEG 1712
Query: 820 ---AIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEK 876
++Q+ +AN+ + ++ + ++ QIE+L KQ ++E+ +D +++K
Sbjct: 1713 KLMSLQERFDEANAALDSASRLTEQLDLKEEQIEELK-KQNELRQEM------LDDVQKK 1765
Query: 877 WLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESD--FDKFGILIKVKFRQSGQLEVL 934
+ + + ++++ RN G +H+ G ++ +K + QL
Sbjct: 1766 LMNLVNSTEGKVDKVLMRNL----FIGHFHTPKHQRHEVLRLMGSILGIKREEMEQL--- 1818
Query: 935 SAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINER--KMFQQLVRAASQP 992
H GG T + + N P R NQ +N ++F + + S P
Sbjct: 1819 -LHEDQGGVTRWMTGWLGGGSKSVPNTPLRP----NQ-QSVLNSSFSELFVKFLETESHP 1872
Query: 993 NTP 995
+ P
Sbjct: 1873 SVP 1875
Score = 85 (35.0 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 54/256 (21%), Positives = 101/256 (39%)
Query: 171 EKAVGDPQLPVQHCALVEKSSKLK-TIECTVKRNGDTLNQLKALNVEQE-KDVERVRQ-R 227
E VG Q+ ++ +VE K +E + R L + +A EQ +++ + R R
Sbjct: 696 ESIVGSNQMSLERNTIVEALKMEKGQLEAELSRADQRLLE-EASKYEQTIQELSKARDLR 754
Query: 228 AELLEKVESMKKKLPWLKYDMKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQE 287
L+ + KL K D + AE +++ E K + E
Sbjct: 755 TSALQLEQQHLMKLSQEK-DFEIAELKKNIEQMDTDHKETKAILSSILEEQKQLTQLISE 813
Query: 288 KAILDGDCKKLSSLINENSKRRMDFLEKVDQGVQ-VQGKYKXXXXXXXXXXXXXXXILKA 346
K I K+ SS + E ++ K++ Q ++ K + + +
Sbjct: 814 KEIFIEKLKERSSELQEELEKSTQASRKIEILKQTIEEKDRSLGSMKEENNHLKEELERL 873
Query: 347 RXXXXXXXXXXQTVPAYEP-PHDKIEKLGSQILELGVQANQKRLQKSEKEKIL---NQNK 402
R + VP EP P D + +L S++L+L + + +KI+ NQ+K
Sbjct: 874 REQQS------RAVPVVEPKPLDSVTELESEVLQLNIVKRNLEEEIKRHQKIIEDQNQSK 927
Query: 403 LTLRQC-SDRLKDMED 417
+ L Q ++ K+M++
Sbjct: 928 MQLLQSLEEQKKEMDE 943
Score = 75 (31.5 bits), Expect = 1.0e-06, Sum P(3) = 1.0e-06
Identities = 42/171 (24%), Positives = 81/171 (47%)
Query: 99 GDTKEEHLTIMRKIDTRNKSEWFFNGKVVPK--GEVLEITK---RFNIQVNNLTQFLPQ- 152
G KEE+ + +++ + + V PK V E+ + NI NL + + +
Sbjct: 857 GSMKEENNHLKEELERLREQQSRAVPVVEPKPLDSVTELESEVLQLNIVKRNLEEEIKRH 916
Query: 153 DRVCEFAKLSPVKLL---EETEKAVGD-----PQLPVQHCAL-VEKSSKLKTIECTVKRN 203
++ E S ++LL EE +K + + Q+ V H L +EK ++K ++ T++
Sbjct: 917 QKIIEDQNQSKMQLLQSLEEQKKEMDEFKCQHEQMNVTHTQLFLEKDEEIKNLQKTIE-- 974
Query: 204 GDTLNQLKALNVEQEKDVERVRQRAELLE--KVESMKKKLPWLKYDMKKAE 252
Q+K E+ +DV+ + +E + KV+S+ + K+D+ KAE
Sbjct: 975 -----QIKTQWHEERQDVQM--ENSEFFQETKVQSLNLENGSEKHDLSKAE 1018
Score = 58 (25.5 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 21/72 (29%), Positives = 40/72 (55%)
Query: 379 ELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAENIFEAY 438
EL VQ +++L +SE +LN L ++ ++++D+ D+ NK + N EN F
Sbjct: 557 ELNVQ--KEKLVQSEL--VLNGLHLAKQKLEEKVEDLVDQLNKSQKSNLNMQKEN-FGLK 611
Query: 439 CWLQQHRHELNK 450
++Q+ EL++
Sbjct: 612 EHIKQNEEELSR 623
Score = 56 (24.8 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 31/119 (26%), Positives = 58/119 (48%)
Query: 131 EVLEITKRFNIQVNN---LTQFLP--QDRVCEFAKLSPVKLLEETEKAVGDP-QLPVQHC 184
++L + + F +VN L Q + ++RV ++ KL EE EK V + ++
Sbjct: 1420 QLLSLNENFTNKVNENELLRQAVTNLKERVL-ILEMDIGKLKEENEKIVERTREKETEYQ 1478
Query: 185 ALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQ---EKDVERVRQRAELLEKVESMKKK 240
AL E + K + + ++ + K+L EQ EK+ + + +LL V+SM++K
Sbjct: 1479 ALQETNMKFSMMLREKEFECHSMKE-KSLAFEQLLKEKEQGKTGELNQLLNAVKSMQEK 1536
Score = 55 (24.4 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 36/141 (25%), Positives = 60/141 (42%)
Query: 369 KIEKLGSQILELGVQANQKRLQKSEKEKILNQN----KLT--LRQCSDRLKDMEDKNNKL 422
+I KL S I EL Q + + + E + QN KLT R+ + L+D E++ +L
Sbjct: 211 EICKLQSIIKELK-QIRSQEIDDHQHEMSVLQNAHQQKLTDISRRHREELRDYEERIEEL 269
Query: 423 LHALRNSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLEDHVGHYIWKS 482
+ L G+ + + + HE+ K L V++ LED + K
Sbjct: 270 ENLLEQGGSGIVIPDHSKI----HEMQKTIQN--LQTEKVASIKKIEELEDKIKDIDKK- 322
Query: 483 FITQDAGDRDFLAKNLKPFDV 503
++ DRD L K + +V
Sbjct: 323 -LSSAENDRDVLRKEKECLNV 342
Score = 53 (23.7 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 43/240 (17%), Positives = 94/240 (39%)
Query: 188 EKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYD 247
E+ S+++ E T + D+ + K ++ +E++ E VR + L ++E + L + +D
Sbjct: 619 EELSRVRD-ELTQSLSRDSGSDFKD-DLLKEREAE-VRNLKQNLSEIEQLNDSLNKVAFD 675
Query: 248 MK--KAEYIXXXXXXXXXXXXXXXXXNTLH-EFSKPIEGKKQEKAILDGDCKKLSSLINE 304
+K + + N + E + +E K EK L+ + ++
Sbjct: 676 LKMENEKLVLACEDIRHQLEESIVGSNQMSLERNTIVEALKMEKGQLEAE-------LSR 728
Query: 305 NSKRRMDFLEKVDQGVQVQGKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPAYE 364
+R ++ K +Q +Q K + L ++ + + +
Sbjct: 729 ADQRLLEEASKYEQTIQELSKARDLRTSALQLEQQHLMKL-SQEKDFEIAELKKNIEQMD 787
Query: 365 PPHDKIEKLGSQILELGVQANQKRLQK--SEKEKILNQNKLTLRQCSDRLKDMEDKNNKL 422
H + + + S ILE QK+L + SEKE + + K + + L+ + K+
Sbjct: 788 TDHKETKAILSSILE-----EQKQLTQLISEKEIFIEKLKERSSELQEELEKSTQASRKI 842
Score = 50 (22.7 bits), Expect = 1.0e-06, Sum P(3) = 1.0e-06
Identities = 42/207 (20%), Positives = 82/207 (39%)
Query: 281 IEGKKQEKAILDGDCKKLSSLI----NENSKRRMDFLEKVDQGVQVQGKYKXXXXXXXXX 336
++ + E A L + +L + + + NSK ++D+ + Q + K K
Sbjct: 1233 VQNMQHESAQLQEELHQLQAQVLVDSDNNSKLQVDYTGLIQSYEQNETKLKNFGQELAQV 1292
Query: 337 XXXXXXILKARXXXXXXXXXXQT-VPA-YEPPHDKIEKLGSQILELGVQANQKRLQ---K 391
+ + +P+ PP E LG + +++++ L+ K
Sbjct: 1293 QHSIGQLYSTKDLLLGKLDIISPQLPSGSSPPSQSAESLGMDKRDTSSESSKQELEELRK 1352
Query: 392 SEKEKILNQNKLTLRQCSDRLKDMEDKNNKLL---HALRNSGAENIFEAYCWLQQHRHE- 447
S +EK + TL++ + RL D ++L H +S + + E LQ+ E
Sbjct: 1353 SLQEK--DATIKTLQENNHRLSDSIAATSELERKEHEQTDSEIKQLKEKQDVLQKSLKEK 1410
Query: 448 -LNKEAYGPVLLEVN--VSNRAHANYL 471
L +A LL +N +N+ + N L
Sbjct: 1411 DLLIKAKSDQLLSLNENFTNKVNENEL 1437
Score = 44 (20.5 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 10/28 (35%), Positives = 19/28 (67%)
Query: 214 NVEQEKDVERVRQRAELLEKVESMKKKL 241
N++ EK V +++ EL +K++ + KKL
Sbjct: 297 NLQTEK-VASIKKIEELEDKIKDIDKKL 323
Score = 37 (18.1 bits), Expect = 0.00093, Sum P(3) = 0.00093
Identities = 9/35 (25%), Positives = 16/35 (45%)
Query: 274 LHEFSKPIEGKKQEKAILDGDCKKLSSLINENSKR 308
+HE K I+ + EK ++L I + K+
Sbjct: 288 IHEMQKTIQNLQTEKVASIKKIEELEDKIKDIDKK 322
>UNIPROTKB|Q8NDV3 [details] [associations]
symbol:SMC1B "Structural maintenance of chromosomes protein
1B" species:9606 "Homo sapiens" [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0030261 "chromosome condensation" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0000800 "lateral element"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0007062
"sister chromatid cohesion" evidence=IEA] [GO:0007126 "meiosis"
evidence=IEA] [GO:0034991 "nuclear meiotic cohesin complex"
evidence=IEA] [GO:0000775 "chromosome, centromeric region"
evidence=IEA] [GO:0030893 "meiotic cohesin complex" evidence=IDA]
InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0007126 Reactome:REACT_115566 GO:GO:0000775
GO:GO:0003677 GO:GO:0006281 Reactome:REACT_111183 GO:GO:0006310
GO:GO:0030261 GO:GO:0000800 GO:GO:0007062 eggNOG:COG1196
SUPFAM:SSF75553 EMBL:AL008718 EMBL:AL021391 GO:GO:0030893
HOVERGEN:HBG039593 KO:K06636 EMBL:AJ504806 EMBL:BC126208
EMBL:AK125736 IPI:IPI00479260 IPI:IPI00807400 IPI:IPI00893258
RefSeq:NP_683515.3 UniGene:Hs.334176 ProteinModelPortal:Q8NDV3
SMR:Q8NDV3 STRING:Q8NDV3 PhosphoSite:Q8NDV3 DMDM:57015410
PaxDb:Q8NDV3 PRIDE:Q8NDV3 Ensembl:ENST00000357450
Ensembl:ENST00000404354 GeneID:27127 KEGG:hsa:27127 UCSC:uc003bgc.3
UCSC:uc003bgd.3 CTD:27127 GeneCards:GC22M045739 H-InvDB:HIX0027884
HGNC:HGNC:11112 HPA:HPA001500 MIM:608685 neXtProt:NX_Q8NDV3
PharmGKB:PA35962 OMA:QLYHNEK GenomeRNAi:27127 NextBio:49836
Bgee:Q8NDV3 CleanEx:HS_SMC1B Genevestigator:Q8NDV3
GermOnline:ENSG00000077935 Uniprot:Q8NDV3
Length = 1235
Score = 109 (43.4 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 99/538 (18%), Positives = 213/538 (39%)
Query: 28 LHNFMTF-DHLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI-----G 81
+ NF ++ + P R +IGPNGSGKS+++ A++ +G L R +I G
Sbjct: 9 VENFKSWRGRQVIGPFRRFTCIIGPNGSGKSNVMDALSFVMGEKIANL-RVKNIQELIHG 67
Query: 82 AYV-KRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFN 140
A++ K S +KI ++ EE T R I SE+ FN +V + + ++
Sbjct: 68 AHIGKPISSSASVKIIYVEESGEEK-TFARII-RGGCSEFRFNDNLVSRSVYIAELEKIG 125
Query: 141 IQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTV 200
I V + Q V + P + + E+ +L ++ EK KL+ E
Sbjct: 126 IIVKAQNCLVFQGTVESISVKKPKERTQFFEEISTSGELIGEY---EEKKRKLQKAEEDA 182
Query: 201 KRNGDTLNQLKALNVEQEKDVERVRQRAELLE--KVESMKKKLPWLKYDMKKAEYIXXXX 258
+ N + + A + + + E + LLE K+ ++ +L L ++ KK +
Sbjct: 183 QFNFNKKKNIAAERRQAKLEKEEAERYQSLLEELKMNKIQLQLFQLYHNEKKIHLLNTKL 242
Query: 259 XXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAIL-------DGDCKKLSSLINENSKRRMD 311
+ HE ++ +K+E +L + + K + +L+N+ + +
Sbjct: 243 EHVNRDLSVKRESLSHHE--NIVKARKKEHGMLTRQLQQTEKELKSVETLLNQKRPQYIK 300
Query: 312 FLEKVDQGVQVQGKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPAYEPPHDKIE 371
E ++ K +KA ++E + E
Sbjct: 301 AKENTSHHLKKLDVAKKSIKDSEKQCSKQEDDIKALETELADLDAAWR--SFEKQIE--E 356
Query: 372 KLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLK-DMEDKNNKLLHALRNSG 430
++ + ++ ++A+Q K KE++ + T+ Q ++L+ + + +L R G
Sbjct: 357 EILHKKRDIELEASQLDRYKELKEQV-RKKVATMTQQLEKLQWEQKTDEERLAFEKRRHG 415
Query: 431 AE--NIFEAYCWLQQHRHELNK-EAYGPVLLEVNVSNRAHANYLEDHVGHYIWKSFITQD 487
N+ + ++ H+ + K E Y ++ + L D + KS +++
Sbjct: 416 EVQGNLKQIKEQIEDHKKRIEKLEEYTKTCMDCLKEKKQQEETLVDEIEKT--KSRMSEF 473
Query: 488 AGDRDFLAKNLKPFDVPILNYVSNESSRKEP-FQISEEMRALGISARLDQVFDAPHAV 544
+ + + L+ + ++E R++ ++ E ++ L + ++FD H +
Sbjct: 474 NEELNLIRSELQNAGID-----THEGKRQQKRAEVLEHLKRLYPDSVFGRLFDLCHPI 526
Score = 107 (42.7 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 71/374 (18%), Positives = 164/374 (43%)
Query: 657 LQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAADLNIQQ 716
+QK E+I ++ + E+ + + N + ++++L+ I N++ K+ Q + +
Sbjct: 842 IQKGSEDIDHLKKAEENCLQTV-NELMAKQQQLKDIRVTQ--NSSAEKVQTQIEEERKKF 898
Query: 717 FKYAIEIKNLLVEIVSCKWSYAEKHMA--SIEFDAKIRELEFNLKQHEKLALQASLHYED 774
E+ L E+VS + S +K + ++ D K++++E L +L + E
Sbjct: 899 LAVDREVGKLQKEVVSIQTSLEQKRLEKHNLLLDCKVQDIEIILLSG---SLDDIIEVE- 954
Query: 775 CKKEVEHCRKHLSD-AKRQAESIAFITPELEKEFLEMPTTIE-ELEAAIQDNISQANSIF 832
E E + + K +A I + + + + + L+ IE L +Q SQ + +
Sbjct: 955 MGTEAESTQATIDIYEKEEAFEIDYSSLKEDLKALQSDQEIEAHLRLLLQQVASQEDILL 1014
Query: 833 FL---NQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEK----WLPTLRNLV 885
N L+ + + + ++ + EA +KE + E + +K++ + ++
Sbjct: 1015 KTAAPNLRALENLKTVRDKFQESTDAFEASRKEARLCRQEFEQVKKRRYDLFTQCFEHVS 1074
Query: 886 AQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVLSAHHQSGGERS 945
I++ + + + + +S + E + + GI G+ + + SGGE+
Sbjct: 1075 ISIDQIYKKLCRNNSAQAFLSPENPEEPYLE-GISYNCV--APGK-RFMPMDNLSGGEKC 1130
Query: 946 VSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTPQCFLLTPKLL 1005
V+ + L ++ PF V+DE++ +D N K+ ++ +Q Q +++ L
Sbjct: 1131 VAALALLFAVHSFRPAPFFVLDEVDAALDNTNIGKV-SSYIKEQTQDQF-QMIVIS---L 1185
Query: 1006 PDLEYSEACSILNI 1019
+ YS A +++ I
Sbjct: 1186 KEEFYSRADALIGI 1199
Score = 74 (31.1 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 38/180 (21%), Positives = 83/180 (46%)
Query: 715 QQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQH--EKLALQASLHY 772
+Q + E+ N+ + + E+ EF KI ++E ++ QH E++ ++ +
Sbjct: 733 EQSQLQSELLNIESQCIMLSEGIKERQRRIKEFQEKIDKVEDDIFQHFCEEIGVENIREF 792
Query: 773 EDCKKEVEHCRKHLSDAKRQ--AESIAFITPELE--KEFLEMPTT-IEELEAAIQDNISQ 827
E+ K V+ R+ D KR + + + +LE + L+ I L+ IQ
Sbjct: 793 EN--KHVK--RQQEIDQKRYFYKKMLTRLNVQLEYSRSHLKKKLNKINTLKETIQKGSED 848
Query: 828 ANSIFFLNQNILQ---EYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNL 884
+ + +N LQ E +Q+Q++D+ Q + ++++ +I+ ++K+L R +
Sbjct: 849 IDHLKKAEENCLQTVNELMAKQQQLKDIRVTQNSSAEKVQ---TQIEEERKKFLAVDREV 905
>DICTYBASE|DDB_G0286403 [details] [associations]
symbol:smc4 "structural maintenance of chromosome
protein" species:44689 "Dictyostelium discoideum" [GO:0051276
"chromosome organization" evidence=IEA] [GO:0030261 "chromosome
condensation" evidence=IEA] [GO:0007062 "sister chromatid cohesion"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0005694 "chromosome"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0046982 "protein heterodimerization activity" evidence=ISS]
[GO:0007076 "mitotic chromosome condensation" evidence=ISS]
[GO:0007059 "chromosome segregation" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA;ISS]
[GO:0000796 "condensin complex" evidence=ISS] [GO:0000070 "mitotic
sister chromatid segregation" evidence=ISS] [GO:0051301 "cell
division" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
dictyBase:DDB_G0286403 Pfam:PF02463 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0051301 GenomeReviews:CM000153_GR GO:GO:0006281
GO:GO:0006310 GO:GO:0046982 EMBL:AAFI02000085 GO:GO:0007076
GO:GO:0000796 GO:GO:0007062 eggNOG:COG1196 KO:K06675
SUPFAM:SSF75553 HSSP:P32908 RefSeq:XP_637730.1
ProteinModelPortal:Q54LV0 STRING:Q54LV0 EnsemblProtists:DDB0219935
GeneID:8625595 KEGG:ddi:DDB_G0286403 OMA:QENFDEN Uniprot:Q54LV0
Length = 1415
Score = 124 (48.7 bits), Expect = 1.2e-07, Sum P(5) = 1.2e-07
Identities = 68/328 (20%), Positives = 144/328 (43%)
Query: 668 VQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAADLNIQQFKY--AIE-IK 724
VQI K + ME I + E+ +++D+ ALA+++++ L + K A+E +
Sbjct: 1010 VQI-KSLAKSMEKSIKILN---ENTKEKDENEAALAEILEKYKSLEKENLKATEAMEAVS 1065
Query: 725 NLLVEIVSCKWSYAEKHMASIEFDAKIR----ELEFNLKQHEKLALQASLHYEDCKKEVE 780
L E ++H + + KI+ +LE +++ + L + DC +
Sbjct: 1066 EQLREKEEETKEIRKEHEKAKKVIEKIKVSNSKLETQIEEFKTLINEKQAEIADCLSKFA 1125
Query: 781 HCRKHLSDAKRQA-ESI-----AFITPELEKEFLE------MPTTIEELEAAIQDNISQA 828
+ K K ES+ A +TPE ++++E + I EL IQ IS+
Sbjct: 1126 NQAKKAKIYKDYVDESLINQVSAILTPEEIEQYMEATEQQNLIAKIHELTTQIQ-KISKE 1184
Query: 829 NSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLVAQI 888
N++ N ++++++ ++++ + + +KE ++L++ L I
Sbjct: 1185 NNV---NIEVVKDFQKKEQEYHSRKAEFDEIEKERDNLSKRYESLRKNRLDEFMAGFTII 1241
Query: 889 NETFSRNFQEMAVAGEVSLD--EHESDFDKFGILIKVKFRQSGQLEVLSAHHQSGGERSV 946
+Q + + G+ L+ + E F + GI V+ + + + SGGE+++
Sbjct: 1242 TMKLKEIYQMITLGGDAELEIIDREDPFQE-GISFSVRPPKKSWKNISNL---SGGEKTL 1297
Query: 947 STILYLVSLQDLTNCPFRVVDEINQGMD 974
S++ + +L V+DEI+ +D
Sbjct: 1298 SSLALVFALHHYKPNALYVMDEIDAALD 1325
Score = 119 (46.9 bits), Expect = 3.9e-07, Sum P(5) = 3.9e-07
Identities = 70/279 (25%), Positives = 127/279 (45%)
Query: 650 IEDEAAKLQKEREEIIN-IVQIEKRKRREMENHINLRKRKLESIEKEDDIN-TALAKLVD 707
++++ KL+ E +EI N I+ + + + ++K K+ES++ D N T K
Sbjct: 958 VQEKVNKLESEVQEIQNSILNVGGPQ-------LKMQKNKVESLQSRIDSNQTNTTK--- 1007
Query: 708 QAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEF-NLKQHEKLAL 766
A++ I+ ++E K++ + + K E A E K + LE NLK E A+
Sbjct: 1008 --ANVQIKSLAKSME-KSIKILNENTK-EKDENEAALAEILEKYKSLEKENLKATE--AM 1061
Query: 767 QA-SLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNI 825
+A S + ++E + RK AK+ E I +LE + E T I E +A I D +
Sbjct: 1062 EAVSEQLREKEEETKEIRKEHEKAKKVIEKIKVSNSKLETQIEEFKTLINEKQAEIADCL 1121
Query: 826 SQ-ANSIFFLNQNILQEY--EHRQRQIEDLSTKQEADK----KELKRFLAEIDALKEKW- 877
S+ AN I ++Y E Q+ + T +E ++ E + +A+I L +
Sbjct: 1122 SKFANQA--KKAKIYKDYVDESLINQVSAILTPEEIEQYMEATEQQNLIAKIHELTTQIQ 1179
Query: 878 -LPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFD 915
+ N+ ++ + F + QE + + DE E + D
Sbjct: 1180 KISKENNVNIEVVKDFQKKEQEYH-SRKAEFDEIEKERD 1217
Score = 73 (30.8 bits), Expect = 1.2e-07, Sum P(5) = 1.2e-07
Identities = 37/130 (28%), Positives = 61/130 (46%)
Query: 118 SEWFFNGKVVPKGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVK-------LLEET 170
S+++ N KVV ++ I K I ++N + Q V + A + P LLE
Sbjct: 277 SKYYLNDKVVKLDDLKTILKDKGIDLDNNRFLILQGEVEQIAMMKPKGVHPGEEGLLEYL 336
Query: 171 EKAVGDPQ-LPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAE 229
E +G + LP +E +SKL IE + + N++K VE+EKD + ++R
Sbjct: 337 EDIIGSKKYLPD-----IEATSKL--IEDIGDKRTSSNNRMKV--VEKEKDALQ-QERDN 386
Query: 230 LLEKVESMKK 239
LE ++ K
Sbjct: 387 ALEYIDKELK 396
Score = 63 (27.2 bits), Expect = 1.2e-07, Sum P(5) = 1.2e-07
Identities = 11/21 (52%), Positives = 16/21 (76%)
Query: 48 VIGPNGSGKSSLVCAIALALG 68
V+GPNGSGKS+++ A+ G
Sbjct: 187 VVGPNGSGKSNVIDAMLFVFG 207
Score = 47 (21.6 bits), Expect = 1.2e-07, Sum P(5) = 1.2e-07
Identities = 12/34 (35%), Positives = 22/34 (64%)
Query: 391 KSEKEKILN-QNKLT-----LRQCSDRLKDMEDK 418
K +K+K++ Q+ L+ LRQC D L ++E++
Sbjct: 855 KEDKKKLIELQDNLSQLDSDLRQCRDELVEIENQ 888
Score = 44 (20.5 bits), Expect = 1.2e-07, Sum P(5) = 1.2e-07
Identities = 10/28 (35%), Positives = 17/28 (60%)
Query: 285 KQEKAILDGDCKKLSSLINENSKRRMDF 312
K+E L KK +S+I E +K++ +F
Sbjct: 483 KEETKHLKTKVKKNNSVIEEETKKQAEF 510
Score = 40 (19.1 bits), Expect = 5.7e-07, Sum P(5) = 5.7e-07
Identities = 18/55 (32%), Positives = 30/55 (54%)
Query: 369 KIEKLGSQILELGVQANQKRLQKSEKEKILN-QNKLTLRQCSDRLKDMEDKNNKL 422
K E+L I +L N+ +L +KE+I + + L + Q S L +++K NKL
Sbjct: 916 KCEELTKVIPQL---KNKAKLSTEKKEQIDSIKESLIVDQKS--LDKVQEKVNKL 965
Score = 40 (19.1 bits), Expect = 0.00032, Sum P(4) = 0.00032
Identities = 32/132 (24%), Positives = 54/132 (40%)
Query: 131 EVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSP----VKLLEETEKAVGDPQLPVQHCAL 186
++LE K Q L + Q C+ L+ VK EET+ ++ + +
Sbjct: 443 KLLEFEKNLKQQNKQLDELNKQMAKCKNELLTTEKKGVKYKEETKHL--KTKVKKNNSVI 500
Query: 187 VEKSSKLKTIE-CTVKRNGDTLN------QL-KALNVEQEKDVERVRQ-RAELLEKVESM 237
E++ K E T+ D + +L K L VE++K + + E+ E M
Sbjct: 501 EEETKKQAEFERSTIIHKQDIVRFEKEYVELPKELIVEEKKLESMLNSLKGEVTELQREM 560
Query: 238 KKK----LPWLK 245
++K LPW K
Sbjct: 561 EEKQKQLLPWSK 572
>UNIPROTKB|Q71YL3 [details] [associations]
symbol:smC "Chromosome partition protein Smc"
species:265669 "Listeria monocytogenes serotype 4b str. F2365"
[GO:0003674 "molecular_function" evidence=ND] InterPro:IPR024704
HAMAP:MF_01894 InterPro:IPR010935 InterPro:IPR011890 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0005737 GO:GO:0005694 GO:GO:0003677
GO:GO:0006260 GO:GO:0006281 GO:GO:0006310 EMBL:AE017262
GenomeReviews:AE017262_GR GO:GO:0030261 GO:GO:0007062
eggNOG:COG1196 SUPFAM:SSF75553 HOGENOM:HOG000036392 KO:K03529
TIGRFAMs:TIGR02168 OMA:GDITKFI RefSeq:YP_014424.1
ProteinModelPortal:Q71YL3 STRING:Q71YL3 GeneID:2797604
KEGG:lmf:LMOf2365_1831 PATRIC:20324957 ProtClustDB:CLSK2518461
Uniprot:Q71YL3
Length = 1186
Score = 129 (50.5 bits), Expect = 1.6e-07, Sum P(3) = 1.6e-07
Identities = 66/302 (21%), Positives = 125/302 (41%)
Query: 690 ESIEKEDDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDA 749
E+ E+++ LA L ++ + I+ L + A+ E
Sbjct: 842 ENYEQKEAAEQKLASLKTNLTSVHTSEESARKSIEELRKDKAETSEKLAQTRQTRAELQE 901
Query: 750 KIRELEFNLKQHEKLALQASLHYEDCKK-EVEHCRKHLSDAKR--QAESIAFITPELEKE 806
K+ LE L Q Q S + E E+ R + R + + +TPE +E
Sbjct: 902 KLELLEAELTQKNN---QISFYVEQKNNAEISIGRLEVDINNRIDRLQEAYLLTPEQAEE 958
Query: 807 FLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRF 866
+ E+ + ++ + + +N ++E+E Q + + L+ +Q+AD K
Sbjct: 959 KILPEVNTEQARSKVRLLKRSIDELGIVNIGAIEEFERIQERFDFLN-RQQADLLAAKET 1017
Query: 867 LAEI-DALKEKWLPTLRNLVAQINETFSRNFQEMAVAG--EVSLDEHESDFDKFGILIKV 923
L ++ D + E+ I F+ F E+ G E+ L + E+ GI I V
Sbjct: 1018 LFKVMDEMDEEMKIRFSESFEAIKTEFAIVFPELFGGGSAELVLLDPENLLTT-GIDIVV 1076
Query: 924 KFRQSGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQ 983
+ +L+ LS +SGGER+++ I L ++ + PF ++DE+ +D N + +
Sbjct: 1077 Q-PPGKKLQNLSL--RSGGERALTAIALLFAIIRVRPVPFCILDEVEAALDEANVTRFSR 1133
Query: 984 QL 985
L
Sbjct: 1134 YL 1135
Score = 95 (38.5 bits), Expect = 1.6e-07, Sum P(3) = 1.6e-07
Identities = 52/228 (22%), Positives = 99/228 (43%)
Query: 26 IELHNFMTFDHLIC---KPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSIGA 82
+E++ F +F + PG + V+GPNGSGKS++ AI LG + R +G
Sbjct: 6 LEMNGFKSFADKVAIDFVPG--MTAVVGPNGSGKSNITEAIRWVLGEQSAKSLRGGRMGD 63
Query: 83 YVKRGEES----GYIKISLRGDTKEEHL-------TIMRKIDTRNKSEWFFNGKVVPKGE 131
+ G ++ + ++SL + ++ L + R+I SE+ N + +
Sbjct: 64 VIFAGSDTRKPINFAEVSLILENEDHFLPLDYSEVAVTRRIYRNGDSEFLINKENCRLKD 123
Query: 132 VLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSS 191
++++ + + + + Q ++ E P + E+A G L +H + +
Sbjct: 124 IVDLFMDSGLGRESFS-IISQGKIDEILNSKPEERRSIFEEAAG--VLKYKH-RKKQAEN 179
Query: 192 KLKTIECTVKRNGDTL----NQLKALNVEQEKDVERVRQRAELLEKVE 235
KL E + R D L QL+ L ++ + + Q+ EL EK E
Sbjct: 180 KLFETEENLNRVQDILYELEGQLEPLEMQASIAKDYLFQQEEL-EKYE 226
Score = 37 (18.1 bits), Expect = 1.6e-07, Sum P(3) = 1.6e-07
Identities = 15/53 (28%), Positives = 21/53 (39%)
Query: 645 TEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDD 697
TEQ I E + ++E + + K E + RK LE E DD
Sbjct: 449 TEQMEIYREVQQTLAKQEAVFGTQERALYKHYETVQQMKSRKETLE--ELADD 499
>DICTYBASE|DDB_G0276101 [details] [associations]
symbol:smc3 "structural maintenance of chromosome
protein" species:44689 "Dictyostelium discoideum" [GO:0051276
"chromosome organization" evidence=IEA] [GO:0005694 "chromosome"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=ISS] [GO:0008278
"cohesin complex" evidence=ISS] [GO:0007064 "mitotic sister
chromatid cohesion" evidence=ISS] [GO:0006275 "regulation of DNA
replication" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA;ISS]
[GO:0000785 "chromatin" evidence=ISS] [GO:0051301 "cell division"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR010935
Pfam:PF06470 SMART:SM00968 InterPro:IPR003395
dictyBase:DDB_G0276101 Pfam:PF02463 GO:GO:0005524 GO:GO:0005634
GO:GO:0051301 GO:GO:0006275 GO:GO:0000785 EMBL:AAFI02000014
GenomeReviews:CM000151_GR GO:GO:0046982 GO:GO:0007064 GO:GO:0008278
eggNOG:COG1196 SUPFAM:SSF75553 HSSP:P32908 KO:K06669
RefSeq:XP_643274.1 ProteinModelPortal:Q552D9 STRING:Q552D9
PRIDE:Q552D9 EnsemblProtists:DDB0219934 GeneID:8620317
KEGG:ddi:DDB_G0276101 InParanoid:Q552D9 OMA:EHERRES
ProtClustDB:CLSZ2734975 Uniprot:Q552D9
Length = 1437
Score = 104 (41.7 bits), Expect = 1.8e-07, Sum P(4) = 1.8e-07
Identities = 81/365 (22%), Positives = 158/365 (43%)
Query: 646 EQRL-IEDEAAKLQKEREEIINIVQIEKRKR-REMENHI---NLRKRKL--ESIEKE-DD 697
EQ++ I + KLQ + ++ N + KR E+E I N KL E +KE D+
Sbjct: 802 EQKISISSDVMKLQSRKNQMTNQLNQNYGKRLMEIEGEIKSLNPENSKLQIELKQKEIDE 861
Query: 698 INTALAKLVDQAADLNIQQFKYA-IEIKNLLVEIVSCKW---SYAEKHMAS-IEFDAKIR 752
IN + + ++ L +Q EIK + V I + K + A++ +A + ++ +
Sbjct: 862 INIEIDGVREKLESL-VQSLNEKDAEIKPIKVSIDALKQQTSTIADQLVADGKKMESLLA 920
Query: 753 ELE-FN----LKQHEKLALQASLHYEDCKK-EVEHCRKHLSDAKRQAESIAFITPELEKE 806
+++ FN KQ L+ ++E+ KK + + L+ + S+ + + +
Sbjct: 921 QIQSFNKVRDAKQLRVLSKGDRFNFEELKKYNKDQSVEELNKINKSLASLRHVNQKANDQ 980
Query: 807 FLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRF 866
F LEA +D + ++N+ Q +++ ++++ E ++ K +
Sbjct: 981 FNSFTNQYNSLEAR-RDELYESNASI---QLLIKTLDNKKD--EAIARTFSGVAKNFTQV 1034
Query: 867 LAEIDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFR 926
E+ L R + E + +E A GE + GI I+V F
Sbjct: 1035 FKELIPGGSAKLVMKRQMDEDEGE--GEDPKEWA-DGETP----KGLLTFTGIGIQVSFG 1087
Query: 927 QSGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLV 986
+ G E S SGG++++ + + +LQ PF ++DEI+ +D N R +++
Sbjct: 1088 E-GH-EPCSMRQLSGGQKTLVALALIFALQRTDPAPFYLLDEIDAALDH-NYRVAVSKMI 1144
Query: 987 RAASQ 991
R S+
Sbjct: 1145 RKHSR 1149
Score = 88 (36.0 bits), Expect = 1.8e-07, Sum P(4) = 1.8e-07
Identities = 47/216 (21%), Positives = 93/216 (43%)
Query: 34 FDHLICKPGSRLNLVIGPNGSGKSSLVCAIALALGG---DTQLLGRATSIGAYVKRGEES 90
F + PG N+V G NG+GKS+L AI LG R + +Y ++
Sbjct: 19 FTSITLHPG--FNVVTGRNGAGKSNLFAAIRFLLGDLNVGNNSEDRLKLLHSYGGNTMQT 76
Query: 91 GYIKISLRGDTKEEHLTI------MRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVN 144
GY++I D + I +R+ +K E+ + K +V + + +
Sbjct: 77 GYVEIVF--DNSDHRFPIDKTEFSLRRTFGTSKDEFSIGNNKLSKADVRNMFEAAGFSSS 134
Query: 145 NLTQFLPQDRVCEFAKLSP---VKLLEETEKAVGDPQLPVQHCAL-VEKSSKLKTIECTV 200
N + Q ++ A + + +L+E A + + A+ +E SK IE +
Sbjct: 135 NPYYIVQQGKINTLALMKDSDRLDMLKEVAGATVYEERKRESVAIMIESESKSIKIEEFL 194
Query: 201 KRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVES 236
K + ++K L+ E+ K+++ + + E+ ++ E+
Sbjct: 195 KYIDE---RIKVLDKER-KELQLYQTQIEMKKQFEA 226
Score = 84 (34.6 bits), Expect = 0.00016, Sum P(3) = 0.00016
Identities = 44/210 (20%), Positives = 95/210 (45%)
Query: 647 QRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLES-IEKEDDINTALAKL 705
++L+ E AKL+K ++E +++ K K +E I + K KLE I +EDDI+ L+
Sbjct: 314 KKLLSKEQAKLEKLQKEQ-DLLSGSKEK---LEKEIEIIKPKLEELIGQEDDIDNKLS-- 367
Query: 706 VDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLA 765
+ + N+Q+ Y +K + + S K + +K++ + +K+ ++ + Q+E+ A
Sbjct: 368 ---STERNLQEL-Y---VKQGMFQFKS-K-TERDKYLG--DESSKLEDI---VNQYEQQA 413
Query: 766 LQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNI 825
ED K+ + K ++ + A I E E+ +++E +
Sbjct: 414 QSLEEDVEDMKQIQQSKGKQFDNSMASKDKEAEIVKTAELRVHELKLEKDQIEQRVSSTF 473
Query: 826 SQANSIFFLNQNILQEYEHRQRQIEDLSTK 855
N + E++ +R ++ + +
Sbjct: 474 QSINEMKSNLTEHRNEWKKAERNLQTIMNR 503
Score = 72 (30.4 bits), Expect = 0.00093, Sum P(4) = 0.00093
Identities = 52/243 (21%), Positives = 99/243 (40%)
Query: 761 HEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAA 820
H K A+ +Y K ++ ++ + ++Q + + E E E ++ ++ ++
Sbjct: 653 HSKGAVTGG-YYSKKKLKLSSYQQ-IKHWRQQYQQLQTQLTEKESELEKLQASLLSIQKT 710
Query: 821 IQDNISQANSIFFLNQNILQEYE----HRQRQIEDLSTKQEADKKELKRFLAEIDALKEK 876
I+ + N I N N E + R IE L KQ LK+ +I K+
Sbjct: 711 IRTKEDEKNKILSNNDNSRVELDKIISERTMYIEILEKKQTI----LKKLKIDIQNCKD- 765
Query: 877 WLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDF--DKFGILIKVKFRQSGQLEVL 934
T+ QIN F+ E ++L E K I V QS + ++
Sbjct: 766 ---TIDGYQKQINTAFNTKLTEEESNLLLTLSESSIQLKEQKISISSDVMKLQSRKNQMT 822
Query: 935 SAHHQSGGERSVSTILYLVSLQDLTNCPFRV------VDEINQGMDPINERKMFQQLVRA 988
+ +Q+ G+R + + SL N ++ +DEIN +D + E+ + LV++
Sbjct: 823 NQLNQNYGKRLMEIEGEIKSLNP-ENSKLQIELKQKEIDEINIEIDGVREK--LESLVQS 879
Query: 989 ASQ 991
++
Sbjct: 880 LNE 882
Score = 63 (27.2 bits), Expect = 1.8e-07, Sum P(4) = 1.8e-07
Identities = 21/63 (33%), Positives = 30/63 (47%)
Query: 372 KLGS--QILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNS 429
KL S QI Q Q + Q +EKE L + + +L ++ ED+ NK+L NS
Sbjct: 669 KLSSYQQIKHWRQQYQQLQTQLTEKESELEKLQASLLSIQKTIRTKEDEKNKILSNNDNS 728
Query: 430 GAE 432
E
Sbjct: 729 RVE 731
Score = 63 (27.2 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 21/77 (27%), Positives = 38/77 (49%)
Query: 363 YEPPHDKIEKLGSQILELGVQANQKRLQKSEKEK---ILNQNKLT--LRQCSDRLKDMED 417
Y+ + ++ + I+ L + R+ EKEK +++ +K + L + +D LK E
Sbjct: 214 YQTQIEMKKQFEAYIIHLEANESNDRILDLEKEKEKYLIHSSKESKKLERFTDELKKDES 273
Query: 418 KNNKLLHALRNSGAENI 434
K NKLL ++ E I
Sbjct: 274 KFNKLLSEIKKIDNEKI 290
Score = 54 (24.1 bits), Expect = 1.8e-07, Sum P(4) = 1.8e-07
Identities = 24/116 (20%), Positives = 48/116 (41%)
Query: 211 KALNVEQEKDVERVRQRAELLE-KVESMKKKLPWLKYDMKKAEYIXXXXXXXXXXXXXXX 269
K L+ EQ K +E++++ +LL E ++K++ +K K E I
Sbjct: 315 KLLSKEQAK-LEKLQKEQDLLSGSKEKLEKEIEIIK--PKLEELIGQEDDIDNKLSSTER 371
Query: 270 XXNTLH--EFSKPIEGKKQEKAILDGDCKKLSSLINENSKRRMDFLEKVDQGVQVQ 323
L+ + + K + L + KL ++N+ ++ E V+ Q+Q
Sbjct: 372 NLQELYVKQGMFQFKSKTERDKYLGDESSKLEDIVNQYEQQAQSLEEDVEDMKQIQ 427
Score = 48 (22.0 bits), Expect = 0.00093, Sum P(4) = 0.00093
Identities = 13/50 (26%), Positives = 27/50 (54%)
Query: 643 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESI 692
+Q EQ L+ KL+KE E I ++ + +++N ++ +R L+ +
Sbjct: 327 LQKEQDLLSGSKEKLEKEIEIIKPKLEELIGQEDDIDNKLSSTERNLQEL 376
Score = 44 (20.5 bits), Expect = 1.2e-05, Sum P(4) = 1.2e-05
Identities = 13/82 (15%), Positives = 36/82 (43%)
Query: 393 EKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAENIF----EAYCWLQQHRHEL 448
+K+ IL + K+ ++ C D + + + N + N+ E+ L++ + +
Sbjct: 748 KKQTILKKLKIDIQNCKDTIDGYQKQINTAFNTKLTEEESNLLLTLSESSIQLKEQKISI 807
Query: 449 NKEAYGPVLLEVNVSNRAHANY 470
+ + + ++N+ + NY
Sbjct: 808 SSDVMKLQSRKNQMTNQLNQNY 829
Score = 44 (20.5 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 46/206 (22%), Positives = 80/206 (38%)
Query: 390 QKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAENIFEAYC--WLQQHRHE 447
+ S+ E I+NQ + + + ++DM+ NS A EA + HE
Sbjct: 398 ESSKLEDIVNQYEQQAQSLEEDVEDMKQIQQSKGKQFDNSMASKDKEAEIVKTAELRVHE 457
Query: 448 LNKEAYGPVLLEVNVSNRAHANYLEDHVGHYIWKSFITQDAGDRDFLAKNLKPFDVPILN 507
L E + + R + + + KS +T+ + +NL+ I+N
Sbjct: 458 LKLE-------KDQIEQRVSSTF--QSINEM--KSNLTEHRNEWKKAERNLQT----IMN 502
Query: 508 YVSNESSRKEPFQISEEMRALGISARLDQVFDA--PHAVKEV-LISQFGLDSSYIGSKET 564
+E + QI +E + GI L ++FD P A + ++ GL + + +T
Sbjct: 503 RPLSEGLTRLN-QIRQEGKIKGIHGPLVELFDIVEPEATLALEVVGGNGLFHVVVDTDDT 561
Query: 565 DQKAD---NVAKLGILDFWTPENHYR 587
K N +G L F P N R
Sbjct: 562 ASKILEILNTENIGRLSF-IPLNRVR 586
>TIGR_CMR|GSU_1130 [details] [associations]
symbol:GSU_1130 "chromosome segregation SMC protein,
putative" species:243231 "Geobacter sulfurreducens PCA" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
InterPro:IPR024704 HAMAP:MF_01894 InterPro:IPR010935
InterPro:IPR011890 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0005737
GO:GO:0005694 GO:GO:0003677 GO:GO:0006260 GO:GO:0006281
GenomeReviews:AE017180_GR GO:GO:0006310 GO:GO:0030261 GO:GO:0007062
SUPFAM:SSF75553 HOGENOM:HOG000036392 TIGRFAMs:TIGR02168 HSSP:Q9X0R4
EMBL:AJ543647 ProteinModelPortal:Q84EX7 PATRIC:22025022
ProtClustDB:CLSK924468 Uniprot:Q84EX7
Length = 1175
Score = 121 (47.7 bits), Expect = 2.1e-07, Sum P(3) = 2.1e-07
Identities = 76/373 (20%), Positives = 155/373 (41%)
Query: 644 QTEQRL-IEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTAL 702
+T++ L + + ++ + + + R++RE + +R ESI D+ +
Sbjct: 788 RTQEALTVSRRTIEAARDAVTALKVKGAQLREKREAASRATVRTE--ESIR---DLRERI 842
Query: 703 AKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMAS----IEFDAKIRELEFNL 758
+L + ++ A+ I ++ +YAE S EFDA++ +
Sbjct: 843 GRLRGEGESSAAEREHLAVAITAAEDDLKGHLAAYAEAETLSRSLRSEFDARVEAVRV-- 900
Query: 759 KQHEKLALQASLHY-EDCKKEVEHCRKHLSDAKRQAES-IAFITPELEKEFLE-MPTTI- 814
E+ L+ H E + EV + LS + I+ + + E E MP+
Sbjct: 901 ---EETGLRELRHQCEAARDEVAAHKLTLSGLTLELNHLISSLADKYRLEMREVMPSYAD 957
Query: 815 ----EELEAAIQDNISQA-NSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAE 869
EE A Q + + + I +N ++EY + + LS++++ ++ L+
Sbjct: 958 RPFDEEAAARRQAELGRLIDEIGEVNLTAIEEYRELEERFAFLSSQKDDLEESLQSLQQA 1017
Query: 870 IDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLD-EHESDFDKFGILIKVKFRQS 928
I + +NE F F + G L +E D + GI I V+
Sbjct: 1018 IQRINRTTRKRFLETFTLVNEKFQEVFPRLFCGGRAELRLTNEEDLLETGIDIIVQ--PP 1075
Query: 929 GQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRA 988
G+ ++ + SGGE++++ + + S+ + PF ++DE++ +D N + F +VR
Sbjct: 1076 GK-KLQNVTLLSGGEKALTAVALIFSIFLIKPTPFCLLDEVDAPLDDANIGR-FNDMVRE 1133
Query: 989 ASQPNTPQCFLLT 1001
S + Q ++T
Sbjct: 1134 MS--DVSQFIIIT 1144
Score = 95 (38.5 bits), Expect = 2.1e-07, Sum P(3) = 2.1e-07
Identities = 56/210 (26%), Positives = 94/210 (44%)
Query: 48 VIGPNGSGKSSLVCAIALALGGDTQLLGRATSIGAYVKRGEES----GYIKISL-----R 98
++GPNG GKS++V AI A+G + R S+ + G E G ++S+
Sbjct: 29 IVGPNGCGKSNVVDAIRWAMGEQSAKNLRGRSMEDIIFGGSEFRKPLGMAEVSMVFATDD 88
Query: 99 GDTKEEHLT-----IMRKIDTRNKSEWFFNGKVVPKGEVLEITKRF-NIQVN-NLTQFLP 151
G ++L+ I R++ +SE+F N P +++IT+ F + V +
Sbjct: 89 GRVPAKYLSYSEIQITRRLYRDGESEYFLNK--TPC-RLMDITELFMDTGVGARAYSIIE 145
Query: 152 QDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECT---VKRNGDTLN 208
Q ++ P + E+A G + + K LK I+ T + R GD L+
Sbjct: 146 QGKIGMILHSKPEERRFIIEEAAGVTKFKAR------KQVALKKIDLTRQNLLRIGDILS 199
Query: 209 QLKA-LNV--EQEKDVERVRQRAELLEKVE 235
++K LN Q K ER R+ E L ++E
Sbjct: 200 EIKRQLNSLQRQVKKAERFREYREELREIE 229
Score = 44 (20.5 bits), Expect = 2.1e-07, Sum P(3) = 2.1e-07
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 284 KKQEKAILDGDCKKLSSLINENSKRR 309
KK+E L G ++L S + E RR
Sbjct: 670 KKREIRELSGTVERLESAVRETETRR 695
Score = 37 (18.1 bits), Expect = 1.1e-06, Sum P(3) = 1.1e-06
Identities = 20/89 (22%), Positives = 42/89 (47%)
Query: 370 IEKLGSQILELGVQANQKRLQKS--EKE-----KILNQNKLTLRQCSDRLKDMEDKNNKL 422
+E+L S + E + + R ++S E+E +IL+Q ++ L+ ++ ++
Sbjct: 681 VERLESAVRETETRREELRGERSRLEEEVRDLRQILHQTEIQFVNAEKDLQRAREECQRI 740
Query: 423 LHALRNSGAENIFEAYCWLQQHRHELNKE 451
+ +G E+ E LQ R L++E
Sbjct: 741 EERIAIAGIED--EQ---LQDERRTLDEE 764
>UNIPROTKB|I3L5B3 [details] [associations]
symbol:LOC100621981 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0016459 "myosin complex" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0003774 "motor activity"
evidence=IEA] InterPro:IPR000048 InterPro:IPR001609
InterPro:IPR002928 Pfam:PF00063 Pfam:PF00612 Pfam:PF01576
PROSITE:PS50096 SMART:SM00015 SMART:SM00242 GO:GO:0005524
GO:GO:0003774 GO:GO:0016459 GeneTree:ENSGT00650000092896
EMBL:FP085451 Ensembl:ENSSSCT00000025354 OMA:AMETELM Uniprot:I3L5B3
Length = 1358
Score = 129 (50.5 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 62/271 (22%), Positives = 124/271 (45%)
Query: 644 QTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEK-EDDINTAL 702
+ ++RL+ + +L+ E E+ + +++ME + + ++E+ K D++ L
Sbjct: 970 EEKKRLLIKQVRELEAELEDERKQRALAVASKKKMEIDLKDLEAQIEAANKARDEVIKQL 1029
Query: 703 AKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHE 762
KL Q D ++ +E + + + +EK + S+E A+I +L+ L E
Sbjct: 1030 RKLQAQMKD-----YQRELEEARASRDEIFAQSKESEKKLKSLE--AEILQLQEELASSE 1082
Query: 763 KLALQASLHYEDCKKEVEHC---RKHLSDAKRQAES-IAFITPELEKEFLEMPTTIEELE 818
+ A ++ E+ + + L D KR+ E+ IA + ELE+E + +E L
Sbjct: 1083 RARRHAEQERDELADEIANSASGKSALLDEKRRLEARIAQLEEELEEE----QSNMELLN 1138
Query: 819 AAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEID-ALKEKW 877
+ Q ++ LN + E Q+ ++ + E KELK L E++ A+K K+
Sbjct: 1139 DRFRKTTLQVDT---LNAELAAERSAAQKS-DNARQQLERQNKELKAKLQELEGAVKSKF 1194
Query: 878 LPTLRNL---VAQINETFSRNFQEMAVAGEV 905
T+ L + Q+ E + +E A A ++
Sbjct: 1195 KATISALEAKIGQLEEQLEQEAKERAAANKL 1225
Score = 110 (43.8 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 51/216 (23%), Positives = 95/216 (43%)
Query: 653 EAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALA--KLVDQAA 710
++A L ++R I Q+E+ E N L R ++ + D +N LA + Q +
Sbjct: 1106 KSALLDEKRRLEARIAQLEEELEEEQSNMELLNDRFRKTTLQVDTLNAELAAERSAAQKS 1165
Query: 711 DLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIE-FDAKIRELEFNLKQHEKLALQAS 769
D QQ + + K L ++ + + K A+I +AKI +LE L+Q K A+
Sbjct: 1166 DNARQQLER--QNKELKAKLQELEGAVKSKFKATISALEAKIGQLEEQLEQEAKERAAAN 1223
Query: 770 LHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQAN 829
+K+++ + D +R A+ ++EK M +LE A ++ ++AN
Sbjct: 1224 KLVRRTEKKLKEIFMQVEDERRHADQYK---EQMEKANARMKQLKRQLEEA-EEEATRAN 1279
Query: 830 SIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKR 865
+ + + +E + E LS + K L+R
Sbjct: 1280 AS---RRKLQRELDDATEANEGLSREVSTLKNRLRR 1312
Score = 104 (41.7 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 51/275 (18%), Positives = 123/275 (44%)
Query: 646 EQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESI-EKEDDINTALAK 704
E+ L D+ K + ++ ++ + ++ +R++ +++ +++K + + +E +I+ A+
Sbjct: 792 EKALAYDKLEKTKNRLQQELDDLLVDLDHQRQIVSNLEKKQKKFDQLLAEEKNISARYAE 851
Query: 705 LVDQA-ADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEK 763
D+A A+ ++ K A+ + L E + K + ++ + A + +L + K
Sbjct: 852 ERDRAEAEAREKETK-ALSLARALEEALEAKDEFERQNK---QLRADMEDLMSSKDDVGK 907
Query: 764 LALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIE-ELEAAIQ 822
+ +++VE R L + + + ++ LE M E +L+ +
Sbjct: 908 NVHELEKSKRALEQQVEEMRTQLEELEDELQATEDAKLRLEVNMQAMKAQFERDLQTRDE 967
Query: 823 DNISQANSIFFLNQNILQEYE--HRQRQIEDLSTKQ-EADKKELKRFLAEIDALKEKWLP 879
N + + + + E E +QR + S K+ E D K+L+ + + +++ +
Sbjct: 968 QNEEKKRLLIKQVRELEAELEDERKQRALAVASKKKMEIDLKDLEAQIEAANKARDEVIK 1027
Query: 880 TLRNLVAQINETFSRNFQEM-AVAGEVSLDEHESD 913
LR L AQ+ + + R +E A E+ ES+
Sbjct: 1028 QLRKLQAQMKD-YQRELEEARASRDEIFAQSKESE 1061
Score = 84 (34.6 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 43/172 (25%), Positives = 71/172 (41%)
Query: 85 KRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVN 144
KR +E +K +L +TK I D R + + E LE KRF +
Sbjct: 550 KREQEVAELKKALEEETKNHEAQIQ---DMRQRHA----AALEELSEQLEQAKRFKANLE 602
Query: 145 NLTQFLPQDR---VCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVK 201
Q L D CE L VK E ++ D Q+ H A V + +L+ +E K
Sbjct: 603 KNKQGLETDNKELACEVKVLQQVKAESEHKRKKLDAQVQELH-AKVSEGDRLR-VELAEK 660
Query: 202 RNG--DTLNQLKALNVEQEKD-VERVRQRAELLEKVESMKKKLPWLKYDMKK 250
N + L+ + L E EK ++ + A L +++ + K L+ + ++
Sbjct: 661 ANKLQNELDNVSTLLEEAEKKGIKFAKDAASLESQLQDTQNKQELLQEETRQ 712
Score = 63 (27.2 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 76/361 (21%), Positives = 135/361 (37%)
Query: 112 IDTRNKSEWFFNGKVVP--KGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEE 169
++T NK E KV+ K E K+ + QV L +V E +L V+L E+
Sbjct: 608 LETDNK-ELACEVKVLQQVKAESEHKRKKLDAQVQEL-----HAKVSEGDRLR-VELAEK 660
Query: 170 TEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAE 229
K + L+E++ K K I+ K +QL+ +QE E RQ+
Sbjct: 661 ANKLQNELD---NVSTLLEEAEK-KGIKFA-KDAASLESQLQDTQNKQELLQEETRQKLN 715
Query: 230 LLEKVESMKKKLPWLKYDMKKAEYIXXXXXXXXXXXXX--XXXXNTLHEFSKPIEGKKQE 287
L ++ ++++ L+ ++ E + + IEG ++
Sbjct: 716 LSSRIRQLEEEKNSLQEQQEEEEEARKNLEKQVLALQAQLTDTKKKVDDDVGTIEGLEEA 775
Query: 288 KAILDGDCKKLSSLINENSKRRMDFLEKVDQGVQVQGKYKXXXXXXXXXXXXXXXILKAR 347
K L D + LS + E + D LEK ++Q + + K +
Sbjct: 776 KKKLLKDAEALSQRLEEKALA-YDKLEKTKN--RLQQELDDLLVDLDHQRQIVSNLEKKQ 832
Query: 348 XXXXXXXXXXQTVPA-YEPPHDKIEKLGSQILELGVQANQKRLQKS--EKEKILNQNKLT 404
+ + A Y D+ E + E + + L+++ K++ QNK
Sbjct: 833 KKFDQLLAEEKNISARYAEERDRAEAEARE-KETKALSLARALEEALEAKDEFERQNK-Q 890
Query: 405 LRQCSDRLKDMEDKNNKLLHALRNSGA---ENIFEAYCWLQQHRHELNKEAYGPVLLEVN 461
LR + L +D K +H L S + + E L++ EL + LEVN
Sbjct: 891 LRADMEDLMSSKDDVGKNVHELEKSKRALEQQVEEMRTQLEELEDELQATEDAKLRLEVN 950
Query: 462 V 462
+
Sbjct: 951 M 951
>UNIPROTKB|O42184 [details] [associations]
symbol:CLIP1 "CAP-Gly domain-containing linker protein 1"
species:9031 "Gallus gallus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0001726
"ruffle" evidence=IEA] [GO:0030659 "cytoplasmic vesicle membrane"
evidence=IEA] [GO:0001578 "microtubule bundle formation"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005881
"cytoplasmic microtubule" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0031116 "positive regulation of
microtubule polymerization" evidence=IEA] [GO:0035371 "microtubule
plus end" evidence=IEA] [GO:0044354 "macropinosome" evidence=IEA]
[GO:0051010 "microtubule plus-end binding" evidence=IEA]
InterPro:IPR000938 InterPro:IPR001878 PROSITE:PS50158 SMART:SM00343
Pfam:PF01302 GO:GO:0005813 GO:GO:0046872 GO:GO:0006810
GO:GO:0008270 GO:GO:0003676 GO:GO:0030659 GO:GO:0001726
GO:GO:0044354 GO:GO:0001578 eggNOG:COG5244 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
GO:GO:0005881 GO:GO:0035371 GO:GO:0031116
GeneTree:ENSGT00700000104055 EMBL:AF014012 EMBL:AF020764
EMBL:AF045650 EMBL:AF045651 IPI:IPI00572978 IPI:IPI00576988
IPI:IPI00582575 IPI:IPI00603875 RefSeq:NP_990273.1 UniGene:Gga.3130
ProteinModelPortal:O42184 SMR:O42184 STRING:O42184 PRIDE:O42184
Ensembl:ENSGALT00000007110 Ensembl:ENSGALT00000007113 GeneID:395784
KEGG:gga:395784 CTD:6249 HOGENOM:HOG000092755 HOVERGEN:HBG007123
InParanoid:O42184 KO:K10421 OMA:SRTEGEA OrthoDB:EOG42Z4PQ
NextBio:20815852 Uniprot:O42184
Length = 1433
Score = 145 (56.1 bits), Expect = 3.4e-07, Sum P(3) = 3.4e-07
Identities = 76/323 (23%), Positives = 140/323 (43%)
Query: 652 DEAAKLQKEREEI------INIVQIEKRKRRE----MENHINLRKRKLESIEKEDDINT- 700
D +A+L K +E+ + +Q+E K E ++ ++ +K E ++E + T
Sbjct: 923 DSSAQLMKMNDELRLKERQLEQIQLELTKANEKAVQLQKNVEQTAQKAEQSQQET-LKTH 981
Query: 701 --ALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIE-FDAKIRELEFN 757
L K+ DQ D+ Q + K+L + KH A I+ F + + E
Sbjct: 982 QEELKKMQDQLTDMKKQMETSQNQYKDLQAKYEKETSEMITKHDADIKGFKQNLLDAEEA 1041
Query: 758 LKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEEL 817
LK +K + E+ KK+ E + A+ +++ +T E + E T+ L
Sbjct: 1042 LKAAQKKNDELETQAEELKKQAEQAKAD-KRAEEVLQTMEKVTKEKDAIHQEKIETLASL 1100
Query: 818 EAAIQDNISQANSIFFLNQNILQEYEH--RQRQIEDLSTKQ-EADKKELKRFLAEIDALK 874
E + Q N N + L QN L+ E + +++ +L K+ E KKE + L A K
Sbjct: 1101 ENSRQTNEKLQNELDMLKQNNLKNEEELTKSKELLNLENKKVEELKKEFEA-LKLAAAQK 1159
Query: 875 EKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVL 934
+ L L+ ++ E R+ E V L+E S + L+++K R+S + +
Sbjct: 1160 SQQLAALQEENVKLAEELGRSRDE--VTSHQKLEEERSVLNNQ--LLEMKKRESTLKKEI 1215
Query: 935 SAHHQSGGERSVSTILYLVSLQD 957
S ++S+S L++ +D
Sbjct: 1216 DEERASL-QKSISDTSALITQKD 1237
Score = 113 (44.8 bits), Expect = 0.00063, Sum P(3) = 0.00063
Identities = 64/356 (17%), Positives = 158/356 (44%)
Query: 644 QTEQRLIEDEAAKL-QKEREEIINIVQIEKRKRR--EMENHINLRKRKLESI-EKEDDIN 699
+ QR +++ KL QKE + + ++E+ K ME + R+ + + + E + +
Sbjct: 852 ENAQRAMQETINKLNQKEEQFALMSSELEQLKSNLTVMETKLKEREEREQQLTEAKVKLE 911
Query: 700 TALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLK 759
+A+++ + D + Q K E++ ++ + + + +++ + + +
Sbjct: 912 NDIAEIMKSSGDSSAQLMKMNDELRLKERQLEQIQLELTKANEKAVQLQKNVEQTAQKAE 971
Query: 760 QHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAES----IAFITPELEKEFLEMPTTIE 815
Q ++ L+ H E+ KK + L+D K+Q E+ + + EKE EM T +
Sbjct: 972 QSQQETLKT--HQEELKK----MQDQLTDMKKQMETSQNQYKDLQAKYEKETSEMITKHD 1025
Query: 816 ELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKE------LKRFLAE 869
+ N+ A Q E E + +++ + + +ADK+ +++ E
Sbjct: 1026 ADIKGFKQNLLDAEEALKAAQKKNDELETQAEELKKQAEQAKADKRAEEVLQTMEKVTKE 1085
Query: 870 IDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSG 929
DA+ ++ + TL +L +T + E+ + + +L ++E + K L+ ++ ++
Sbjct: 1086 KDAIHQEKIETLASL-ENSRQTNEKLQNELDMLKQNNL-KNEEELTKSKELLNLENKKVE 1143
Query: 930 QLEV-LSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQ 984
+L+ A + ++S L +LQ+ N ++ +E+ + D + + ++
Sbjct: 1144 ELKKEFEALKLAAAQKSQQ----LAALQE-ENV--KLAEELGRSRDEVTSHQKLEE 1192
Score = 65 (27.9 bits), Expect = 3.4e-07, Sum P(3) = 3.4e-07
Identities = 20/58 (34%), Positives = 33/58 (56%)
Query: 372 KLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNS 429
KL Q L +QA +K++Q E EK+ N K L+ +L D+E KN ++ +++S
Sbjct: 777 KLEIQKLSEQLQAAEKQIQNLETEKVSNLTK-ELQGKEQKLLDLE-KNLSAVNQVKDS 832
Score = 58 (25.5 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06
Identities = 24/74 (32%), Positives = 36/74 (48%)
Query: 369 KIEKLGSQILELGVQANQKRLQK--SEKEKILNQNKLTLRQCSDR-LKDMEDKNNKLLHA 425
K E SQ L+ ++A + +L + EKE+ L K L D+ L +MED NKL A
Sbjct: 670 KQENEKSQHLK-EIEALKAKLLEVTEEKEQTLENLKAKLESVEDQHLVEMEDTLNKLQEA 728
Query: 426 LRNSGAENIFEAYC 439
++ +A C
Sbjct: 729 EIKVKELDVLQAKC 742
Score = 50 (22.7 bits), Expect = 3.4e-07, Sum P(3) = 3.4e-07
Identities = 30/125 (24%), Positives = 57/125 (45%)
Query: 130 GEVLEITKRFNIQVNNLT--QFLPQDRVCEFAKLSPVKLLEETE--KAVGDPQLPVQHCA 185
G + E + R+ +++ T Q +++ +L + LE E KA Q A
Sbjct: 335 GLLTETSSRYARKISGTTALQEALKEKQQHIEQLLAERDLERAEVAKATSHVGEIEQELA 394
Query: 186 LVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLK 245
LV +E K ++QL+A+ VE R++ ELL ++E K+K+ L+
Sbjct: 395 LVRDGHDRHVLEMEAK-----MDQLRAM-VEAAD-----REKVELLNQLEEEKRKVEDLQ 443
Query: 246 YDMKK 250
+ +++
Sbjct: 444 FRVEE 448
Score = 50 (22.7 bits), Expect = 3.4e-07, Sum P(3) = 3.4e-07
Identities = 37/161 (22%), Positives = 65/161 (40%)
Query: 86 RGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNN 145
R EE K L TK EH I ++++ +S F K LE T+ + +
Sbjct: 445 RVEEESITKGDLETQTKLEHARI-KELE---QSLLFEKTKADKLQRELEDTRVATVSEKS 500
Query: 146 LTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGD 205
L +D +++ ++ E+ K + D + L E SS + + K +
Sbjct: 501 RIMELERDLALRVKEVAELRGRLESSKHIDDVDTSLS--LLQEISSLQEKMAAAGKEHQR 558
Query: 206 TLNQLKALNVEQE----KDVERVRQRAELLEKV-ESMKKKL 241
++ LK E K+++ + E + K ES+K KL
Sbjct: 559 EMSSLKEKFESSEEALRKEIKTLSASNERMGKENESLKTKL 599
Score = 47 (21.6 bits), Expect = 6.7e-07, Sum P(3) = 6.7e-07
Identities = 23/98 (23%), Positives = 46/98 (46%)
Query: 157 EFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVE 216
E A S + +EE K + + Q E ++++ ++ + L +LK N +
Sbjct: 618 ESAIASHQQAMEEL-KVSFNKGVGAQTAEFAELKTQMEKVKLDYENEMSNL-KLKQENEK 675
Query: 217 QE--KDVERVRQRAELLEKVESMKKKLPWLKYDMKKAE 252
+ K++E ++ A+LLE E ++ L LK ++ E
Sbjct: 676 SQHLKEIEALK--AKLLEVTEEKEQTLENLKAKLESVE 711
Score = 41 (19.5 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 25/103 (24%), Positives = 40/103 (38%)
Query: 424 HALRNSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLEDHVGHYIWKSF 483
+A + SG + EA QQH +L L E ++ RA HVG +
Sbjct: 344 YARKISGTTALQEALKEKQQHIEQL--------LAERDLE-RAEVAKATSHVGEIEQELA 394
Query: 484 ITQDAGDRDFLAKNLKPFDVPILNYVSNESSRKEPFQISEEMR 526
+ +D DR L K + + ++ + Q+ EE R
Sbjct: 395 LVRDGHDRHVLEMEAKMDQLRAMVEAADREKVELLNQLEEEKR 437
>ASPGD|ASPL0000017987 [details] [associations]
symbol:sldI species:162425 "Emericella nidulans"
[GO:0000077 "DNA damage checkpoint" evidence=IMP] [GO:0009411
"response to UV" evidence=IMP] [GO:0006974 "response to DNA damage
stimulus" evidence=IMP] [GO:0000722 "telomere maintenance via
recombination" evidence=IEA] [GO:0006284 "base-excision repair"
evidence=IEA] [GO:0000734 "gene conversion at mating-type locus,
DNA repair synthesis" evidence=IEA] [GO:0032078 "negative
regulation of endodeoxyribonuclease activity" evidence=IEA]
[GO:0042138 "meiotic DNA double-strand break formation"
evidence=IEA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IEA] [GO:0000724 "double-strand break repair via
homologous recombination" evidence=IEA] [GO:0006303 "double-strand
break repair via nonhomologous end joining" evidence=IEA]
[GO:0003691 "double-stranded telomeric DNA binding" evidence=IEA]
[GO:0043047 "single-stranded telomeric DNA binding" evidence=IEA]
[GO:0051880 "G-quadruplex DNA binding" evidence=IEA] [GO:0004017
"adenylate kinase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IEA] [GO:0030870 "Mre11 complex" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR004584 GO:GO:0005524 GO:GO:0006281 EMBL:BN001302
EMBL:AACD01000061 eggNOG:COG0419 GO:GO:0030870 KO:K10866
PANTHER:PTHR18867 TIGRFAMs:TIGR00606 OMA:NELGTHR
HOGENOM:HOG000192269 OrthoDB:EOG4C2MJW RefSeq:XP_661223.1
ProteinModelPortal:Q5B761 STRING:Q5B761
EnsemblFungi:CADANIAT00005121 GeneID:2873042 KEGG:ani:AN3619.2
Uniprot:Q5B761
Length = 1319
Score = 113 (44.8 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 61/245 (24%), Positives = 113/245 (46%)
Query: 646 EQRLIEDEAAK-LQKE-REEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALA 703
+Q + D A + Q E RE ++ QI +RK E+ N KR++ + +KE A
Sbjct: 419 DQTQVLDRAKREAQGELREAQTSLNQISERKSVLQESK-NAAKRQIAANDKE--AAGYQA 475
Query: 704 KLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQ--H 761
KL +AD Q A+E N E + + A++ S D +I ++ +++
Sbjct: 476 KLDSISADEGAQA---ALE-SN--AEDIHSRLDQAKERERSASRDKQIEDINSQIRELED 529
Query: 762 EKLALQASLHYEDCKK-----EVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEE 816
E L A L E KK ++H +K L D +R E++ E +F+ I+
Sbjct: 530 ENSRLNAEL-IEATKKAGDLARLDHLKKELKDRERSLETMKSAHGERLSKFVNPNWKIDT 588
Query: 817 LEAAIQDNIS-QANSIFFLNQ---NILQEYEHRQRQIEDLSTKQEADKKELKRFLAEI-D 871
LE Q + ++N++ + ++ +E E + +++D+ +KELK + EI +
Sbjct: 589 LEQDFQRTLEDKSNAVIMAERAKDSLSRELEQVEYKLKDVEKSLTQRQKELKECVEEIRE 648
Query: 872 ALKEK 876
A+ ++
Sbjct: 649 AIDDE 653
Score = 98 (39.6 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 56/229 (24%), Positives = 104/229 (45%)
Query: 45 LNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSIGAYVKR----GEES--GYIKISLR 98
L L++G NGSGK++++ + A GD L + GA++ GE+ +K+S +
Sbjct: 46 LTLIVGYNGSGKTTIIECLKYATTGD---LPPNSKGGAFIHDPKLCGEKEVLAQVKLSFK 102
Query: 99 GD-------TKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQFLP 151
G T+ LT+ K TR + ++ +GE I+ R V L Q +P
Sbjct: 103 GTSGAKMVATRSLQLTV--KKTTRQQKTLEGQLLMIKEGERTAISSR----VAELDQIMP 156
Query: 152 QDRVCEFAKLSPVKLLEETEKA--VGDPQ-LPVQHCALVE--KSSK-LKTIECTVKRNGD 205
Q A L V + E + +P L + + E K +K + I+ K+ +
Sbjct: 157 QYLGVSKAILDSVIFCHQDESLWPMSEPSVLKKKFDEIFEAVKYTKAIDNIKALRKKQNE 216
Query: 206 TLNQLKALNVEQEKDVE---RVRQRAELL-EKVESMKKKLPWLKYDMKK 250
L + K + ++D E R +R+ +L E++E+++ + L +M++
Sbjct: 217 ELGKYKIIEQHAKEDKEKADRAEKRSIMLQEEIETLRVETQQLTQEMRR 265
Score = 81 (33.6 bits), Expect = 0.00086, Sum P(2) = 0.00086
Identities = 55/229 (24%), Positives = 102/229 (44%)
Query: 652 DEAAK--LQKEREEIIN-IVQIEKRKR-----REMENHINLRKRKLESIEKEDDINTALA 703
DE A+ L+ E+I + + Q ++R+R +++E+ IN + R+LE ++ +N L
Sbjct: 483 DEGAQAALESNAEDIHSRLDQAKERERSASRDKQIED-INSQIRELE--DENSRLNAELI 539
Query: 704 KLVDQAADL-NIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELE--FN--L 758
+ +A DL + K E+K+ + + K ++ E+ + + KI LE F L
Sbjct: 540 EATKKAGDLARLDHLKK--ELKDRERSLETMKSAHGERLSKFVNPNWKIDTLEQDFQRTL 597
Query: 759 KQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELE 818
+ + A + +E+E L D ++ +T + +KE E +EE+
Sbjct: 598 EDKSNAVIMAERAKDSLSRELEQVEYKLKDVEKS------LT-QRQKELKEC---VEEIR 647
Query: 819 AAIQDNISQANSIFFLNQNILQEYEHRQRQ---IEDLSTKQEADKKELK 864
AI D + + QN L + Q IE+ ++ A KE K
Sbjct: 648 EAIDDEPEEYPDVVSQRQNQLDMAKSTAEQGAGIEEYMSRCLATAKEDK 696
>UNIPROTKB|P14105 [details] [associations]
symbol:MYH9 "Myosin-9" species:9031 "Gallus gallus"
[GO:0005516 "calmodulin binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016459 "myosin complex" evidence=IEA]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0000146
"microfilament motor activity" evidence=ISS] [GO:0000910
"cytokinesis" evidence=ISS] [GO:0001525 "angiogenesis"
evidence=ISS] [GO:0001725 "stress fiber" evidence=ISS] [GO:0001726
"ruffle" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0005826 "actomyosin
contractile ring" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=ISS] [GO:0006509 "membrane
protein ectodomain proteolysis" evidence=ISS] [GO:0008305 "integrin
complex" evidence=ISS] [GO:0008360 "regulation of cell shape"
evidence=ISS] [GO:0015031 "protein transport" evidence=ISS]
[GO:0015629 "actin cytoskeleton" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0030048 "actin filament-based movement"
evidence=ISS] [GO:0030220 "platelet formation" evidence=ISS]
[GO:0030224 "monocyte differentiation" evidence=ISS] [GO:0031252
"cell leading edge" evidence=ISS] [GO:0031532 "actin cytoskeleton
reorganization" evidence=ISS] [GO:0032154 "cleavage furrow"
evidence=ISS] [GO:0042803 "protein homodimerization activity"
evidence=ISS] [GO:0043234 "protein complex" evidence=ISS]
[GO:0043495 "protein anchor" evidence=ISS] [GO:0043534 "blood
vessel endothelial cell migration" evidence=ISS] [GO:0051015 "actin
filament binding" evidence=ISS] InterPro:IPR000048
InterPro:IPR001609 InterPro:IPR002928 InterPro:IPR004009
Pfam:PF00063 Pfam:PF00612 Pfam:PF01576 Pfam:PF02736 PRINTS:PR00193
PROSITE:PS50096 SMART:SM00015 SMART:SM00242 GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 GO:GO:0005634 GO:GO:0043234
GO:GO:0042803 GO:GO:0008360 GO:GO:0015031 GO:GO:0051015
GO:GO:0001525 GO:GO:0016887 GO:GO:0000910 GO:GO:0031532
GO:GO:0000146 GO:GO:0001725 GO:GO:0001726 GO:GO:0043495
GO:GO:0005826 GO:GO:0006509 GO:GO:0043534 Reactome:REACT_115433
GO:GO:0032154 GO:GO:0030048 eggNOG:COG5022 GO:GO:0016459
GO:GO:0030224 GO:GO:0030220 HOVERGEN:HBG004704 KO:K10352 CTD:4627
EMBL:M26510 IPI:IPI00572165 PIR:A33977 RefSeq:NP_990808.1
UniGene:Gga.4462 ProteinModelPortal:P14105 SMR:P14105 STRING:P14105
PRIDE:P14105 GeneID:396469 KEGG:gga:396469 NextBio:20816508
Uniprot:P14105
Length = 1959
Score = 116 (45.9 bits), Expect = 4.9e-07, Sum P(2) = 4.9e-07
Identities = 63/250 (25%), Positives = 122/250 (48%)
Query: 651 EDEAAKLQKEREEIINIVQIE-KRKRREMENHINLRKR-KLESIEKEDDINTALAKLVDQ 708
E++ +L ++ E+ V++E +RK+R + + RK+ +L+ + E I+TA K D+
Sbjct: 1581 EEKRKQLIRQVREME--VELEDERKQRSIA--VAARKKLELDLKDLESHIDTA-NKNRDE 1635
Query: 709 AADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQ-HEKLALQ 767
A +++ K ++K+ + E+ + S E + E + K++ +E + Q E+LA
Sbjct: 1636 AIK-HVR--KLQAQMKDYMRELEDTRTSREEILAQAKENEKKLKSMEAEMIQLQEELAAA 1692
Query: 768 ASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPE----LEKEFLEMPTTIEELEA---A 820
E K++ + R L+D + + E LE ++ +EE +
Sbjct: 1693 -----ERAKRQAQQERDELADEIANSSGKGALAMEEKRRLEARIAQLEEELEEEQGNTEI 1747
Query: 821 IQDNISQAN-SIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEID-ALKEKWL 878
I D + +AN I +N ++ E + Q+ E+ + E KELK L E++ A+K K+
Sbjct: 1748 INDRLKKANLQIDQMNADLNAERSNAQKN-ENARQQMERQNKELKLKLQEMESAVKSKYK 1806
Query: 879 PTLRNLVAQI 888
T+ L A+I
Sbjct: 1807 ATITALEAKI 1816
Score = 98 (39.6 bits), Expect = 4.9e-07, Sum P(2) = 4.9e-07
Identities = 69/349 (19%), Positives = 144/349 (41%)
Query: 85 KRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEW--FFNGKVVPKGEVLEITKRFNIQ 142
+R E S +K+ L+G EH +K+D + + F G+ V K E+ E + ++
Sbjct: 1225 ERAELSNEVKVLLQGKGDAEHKR--KKVDAQLQELQVKFTEGERV-KTELAERVNKLQVE 1281
Query: 143 VNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLK-TIECTVK 201
++N+T L Q + KL+ K E + D Q L+++ ++LK + +K
Sbjct: 1282 LDNVTGLLNQSD-SKSIKLA--KDFSALESQLQDTQ------ELLQEETRLKLSFSTKLK 1332
Query: 202 RNGDTLNQLKALNVEQEKDVER-VRQRAELLEK--VESMKKK---LPWLKY-DMKKAEYI 254
+ D N LK +E+E++ +R + ++ +L++ VE+ KK L L+ + K +
Sbjct: 1333 QTEDEKNALKE-QLEEEEEAKRNLEKQISVLQQQAVEARKKMDDGLGCLEIAEEAKKKLQ 1391
Query: 255 XXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAI-LDGDCKKLSSLINENSKRRMDFL 313
+ L + ++ + + A+ LD + +S+L E +++ D L
Sbjct: 1392 KDLESLTQRYEEKIAAYDKLEKTKTRLQQELDDIAVDLDHQRQTVSNL--EKKQKKFDQL 1449
Query: 314 EKVDQGVQVQGKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPAYEPPHDKIEKL 373
++ + + + + AR + + ++E L
Sbjct: 1450 LAEEKNISAKYAEERDRAEAEAREKETKALSLARALEEAIEQKAELERVNKQFRTEMEDL 1509
Query: 374 GSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKL 422
S ++G ++ K E+ + + K L + D L+ ED +L
Sbjct: 1510 MSSKDDVGKSVHELEKAKRALEQQVEEMKTQLEELEDELQATEDAKLRL 1558
Score = 89 (36.4 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 46/217 (21%), Positives = 97/217 (44%)
Query: 654 AAKLQKEREEIINIVQIEKRKRREMENH--IN--LRKRKLESIEKEDDINTALAKLVDQA 709
A ++++R I Q+E+ E N IN L+K L+ + D+N A+ +
Sbjct: 1718 ALAMEEKRRLEARIAQLEEELEEEQGNTEIINDRLKKANLQIDQMNADLN---AERSNAQ 1774
Query: 710 ADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIE-FDAKIRELEFNLKQHEKLALQA 768
+ N +Q + + K L +++ + + K+ A+I +AKI +LE L K A
Sbjct: 1775 KNENARQ-QMERQNKELKLKLQEMESAVKSKYKATITALEAKIVQLEEQLDMETKERQAA 1833
Query: 769 SLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQA 828
S +K+++ + D +R AE + +K + + +LE A ++ +A
Sbjct: 1834 SKQVRRAEKKLKDILLQVDDERRNAEQFK---DQADKANMRLKQLKRQLEEA-EEEAQRA 1889
Query: 829 NSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKR 865
N + + + +E + + ++ + + K +L+R
Sbjct: 1890 N----VRRKLQRELDDATETADAMNREVSSLKSKLRR 1922
Score = 88 (36.0 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 57/240 (23%), Positives = 105/240 (43%)
Query: 653 EAAKLQKEREEIINIV-QIEKRKRREMENHINLRKRKLESIEKEDDIN-TALAKL---VD 707
E L ++++ V ++EK KR +E + K +LE E ED++ T AKL V+
Sbjct: 1505 EMEDLMSSKDDVGKSVHELEKAKRA-LEQQVEEMKTQLE--ELEDELQATEDAKLRLEVN 1561
Query: 708 QAA-------DLNIQQFKYAIEIKNLLVEIVSCKWSYA-EKHMASIEFDAKIRELEFNLK 759
Q A DL + + + K L+ ++ + E+ SI A+ ++LE +LK
Sbjct: 1562 QQAMKAQFDRDLLGRDEQNEEKRKQLIRQVREMEVELEDERKQRSIAVAAR-KKLELDLK 1620
Query: 760 QHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEA 819
E A+ + ++ K V + + D R+ E E+ + E ++ +EA
Sbjct: 1621 DLESHIDTANKNRDEAIKHVRKLQAQMKDYMRELEDTRTSREEILAQAKENEKKLKSMEA 1680
Query: 820 A---IQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEK 876
+Q+ ++ A + QE + +I + S K +E +R A I L+E+
Sbjct: 1681 EMIQLQEELAAAERA---KRQAQQERDELADEIANSSGKGALAMEEKRRLEARIAQLEEE 1737
>UNIPROTKB|F1SSA6 [details] [associations]
symbol:LOC396903 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0016459 "myosin complex" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0003774 "motor activity"
evidence=IEA] InterPro:IPR000048 InterPro:IPR001609
InterPro:IPR002928 Pfam:PF00063 Pfam:PF00612 Pfam:PF01576
PRINTS:PR00193 PROSITE:PS50096 SMART:SM00015 SMART:SM00242
GO:GO:0005524 GO:GO:0003774 GO:GO:0016459
GeneTree:ENSGT00650000092896 OMA:DKNVHEL EMBL:CU672254
Ensembl:ENSSSCT00000019573 ArrayExpress:F1SSA6 Uniprot:F1SSA6
Length = 1864
Score = 129 (50.5 bits), Expect = 5.2e-07, Sum P(2) = 5.2e-07
Identities = 62/271 (22%), Positives = 124/271 (45%)
Query: 644 QTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEK-EDDINTAL 702
+ ++RL+ + +L+ E E+ + +++ME + + ++E+ K D++ L
Sbjct: 1476 EEKKRLLIKQVRELEAELEDERKQRALAVASKKKMEIDLKDLEAQIEAANKARDEVIKQL 1535
Query: 703 AKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHE 762
KL Q D ++ +E + + + +EK + S+E A+I +L+ L E
Sbjct: 1536 RKLQAQMKD-----YQRELEEARASRDEIFAQSKESEKKLKSLE--AEILQLQEELASSE 1588
Query: 763 KLALQASLHYEDCKKEVEHC---RKHLSDAKRQAES-IAFITPELEKEFLEMPTTIEELE 818
+ A ++ E+ + + L D KR+ E+ IA + ELE+E + +E L
Sbjct: 1589 RARRHAEQERDELADEIANSASGKSALLDEKRRLEARIAQLEEELEEE----QSNMELLN 1644
Query: 819 AAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEID-ALKEKW 877
+ Q ++ LN + E Q+ ++ + E KELK L E++ A+K K+
Sbjct: 1645 DRFRKTTLQVDT---LNAELAAERSAAQKS-DNARQQLERQNKELKAKLQELEGAVKSKF 1700
Query: 878 LPTLRNL---VAQINETFSRNFQEMAVAGEV 905
T+ L + Q+ E + +E A A ++
Sbjct: 1701 KATISALEAKIGQLEEQLEQEAKERAAANKL 1731
Score = 110 (43.8 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 51/216 (23%), Positives = 95/216 (43%)
Query: 653 EAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALA--KLVDQAA 710
++A L ++R I Q+E+ E N L R ++ + D +N LA + Q +
Sbjct: 1612 KSALLDEKRRLEARIAQLEEELEEEQSNMELLNDRFRKTTLQVDTLNAELAAERSAAQKS 1671
Query: 711 DLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIE-FDAKIRELEFNLKQHEKLALQAS 769
D QQ + + K L ++ + + K A+I +AKI +LE L+Q K A+
Sbjct: 1672 DNARQQLER--QNKELKAKLQELEGAVKSKFKATISALEAKIGQLEEQLEQEAKERAAAN 1729
Query: 770 LHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQAN 829
+K+++ + D +R A+ ++EK M +LE A ++ ++AN
Sbjct: 1730 KLVRRTEKKLKEIFMQVEDERRHADQYK---EQMEKANARMKQLKRQLEEA-EEEATRAN 1785
Query: 830 SIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKR 865
+ + + +E + E LS + K L+R
Sbjct: 1786 AS---RRKLQRELDDATEANEGLSREVSTLKNRLRR 1818
Score = 104 (41.7 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 51/275 (18%), Positives = 123/275 (44%)
Query: 646 EQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESI-EKEDDINTALAK 704
E+ L D+ K + ++ ++ + ++ +R++ +++ +++K + + +E +I+ A+
Sbjct: 1298 EKALAYDKLEKTKNRLQQELDDLLVDLDHQRQIVSNLEKKQKKFDQLLAEEKNISARYAE 1357
Query: 705 LVDQA-ADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEK 763
D+A A+ ++ K A+ + L E + K + ++ + A + +L + K
Sbjct: 1358 ERDRAEAEAREKETK-ALSLARALEEALEAKDEFERQNK---QLRADMEDLMSSKDDVGK 1413
Query: 764 LALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIE-ELEAAIQ 822
+ +++VE R L + + + ++ LE M E +L+ +
Sbjct: 1414 NVHELEKSKRALEQQVEEMRTQLEELEDELQATEDAKLRLEVNMQAMKAQFERDLQTRDE 1473
Query: 823 DNISQANSIFFLNQNILQEYE--HRQRQIEDLSTKQ-EADKKELKRFLAEIDALKEKWLP 879
N + + + + E E +QR + S K+ E D K+L+ + + +++ +
Sbjct: 1474 QNEEKKRLLIKQVRELEAELEDERKQRALAVASKKKMEIDLKDLEAQIEAANKARDEVIK 1533
Query: 880 TLRNLVAQINETFSRNFQEM-AVAGEVSLDEHESD 913
LR L AQ+ + + R +E A E+ ES+
Sbjct: 1534 QLRKLQAQMKD-YQRELEEARASRDEIFAQSKESE 1567
Score = 84 (34.6 bits), Expect = 5.2e-07, Sum P(2) = 5.2e-07
Identities = 43/172 (25%), Positives = 71/172 (41%)
Query: 85 KRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVN 144
KR +E +K +L +TK I D R + + E LE KRF +
Sbjct: 1056 KREQEVAELKKALEEETKNHEAQIQ---DMRQRHA----AALEELSEQLEQAKRFKANLE 1108
Query: 145 NLTQFLPQDR---VCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVK 201
Q L D CE L VK E ++ D Q+ H A V + +L+ +E K
Sbjct: 1109 KNKQGLETDNKELACEVKVLQQVKAESEHKRKKLDAQVQELH-AKVSEGDRLR-VELAEK 1166
Query: 202 RNG--DTLNQLKALNVEQEKD-VERVRQRAELLEKVESMKKKLPWLKYDMKK 250
N + L+ + L E EK ++ + A L +++ + K L+ + ++
Sbjct: 1167 ANKLQNELDNVSTLLEEAEKKGIKFAKDAASLESQLQDTQNKQELLQEETRQ 1218
Score = 63 (27.2 bits), Expect = 7.3e-05, Sum P(2) = 7.3e-05
Identities = 76/361 (21%), Positives = 135/361 (37%)
Query: 112 IDTRNKSEWFFNGKVVP--KGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEE 169
++T NK E KV+ K E K+ + QV L +V E +L V+L E+
Sbjct: 1114 LETDNK-ELACEVKVLQQVKAESEHKRKKLDAQVQEL-----HAKVSEGDRLR-VELAEK 1166
Query: 170 TEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAE 229
K + L+E++ K K I+ K +QL+ +QE E RQ+
Sbjct: 1167 ANKLQNELD---NVSTLLEEAEK-KGIKFA-KDAASLESQLQDTQNKQELLQEETRQKLN 1221
Query: 230 LLEKVESMKKKLPWLKYDMKKAEYIXXXXXXXXXXXXX--XXXXNTLHEFSKPIEGKKQE 287
L ++ ++++ L+ ++ E + + IEG ++
Sbjct: 1222 LSSRIRQLEEEKNSLQEQQEEEEEARKNLEKQVLALQAQLTDTKKKVDDDVGTIEGLEEA 1281
Query: 288 KAILDGDCKKLSSLINENSKRRMDFLEKVDQGVQVQGKYKXXXXXXXXXXXXXXXILKAR 347
K L D + LS + E + D LEK ++Q + + K +
Sbjct: 1282 KKKLLKDAEALSQRLEEKALA-YDKLEKTKN--RLQQELDDLLVDLDHQRQIVSNLEKKQ 1338
Query: 348 XXXXXXXXXXQTVPA-YEPPHDKIEKLGSQILELGVQANQKRLQKS--EKEKILNQNKLT 404
+ + A Y D+ E + E + + L+++ K++ QNK
Sbjct: 1339 KKFDQLLAEEKNISARYAEERDRAEAEARE-KETKALSLARALEEALEAKDEFERQNK-Q 1396
Query: 405 LRQCSDRLKDMEDKNNKLLHALRNSGA---ENIFEAYCWLQQHRHELNKEAYGPVLLEVN 461
LR + L +D K +H L S + + E L++ EL + LEVN
Sbjct: 1397 LRADMEDLMSSKDDVGKNVHELEKSKRALEQQVEEMRTQLEELEDELQATEDAKLRLEVN 1456
Query: 462 V 462
+
Sbjct: 1457 M 1457
>UNIPROTKB|Q10970 [details] [associations]
symbol:smc "Chromosome partition protein Smc" species:1773
"Mycobacterium tuberculosis" [GO:0005618 "cell wall" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR024704 HAMAP:MF_01894 InterPro:IPR010935
InterPro:IPR011890 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0005618 GO:GO:0005694 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR GO:GO:0003677
GO:GO:0006281 GO:GO:0006310 EMBL:BX842581 GO:GO:0030261
GO:GO:0007062 eggNOG:COG1196 SUPFAM:SSF75553 KO:K03529
TIGRFAMs:TIGR02168 EMBL:AJ414609 PIR:B70748 RefSeq:NP_217438.2
RefSeq:NP_337503.1 RefSeq:YP_006516375.1 ProteinModelPortal:Q10970
SMR:Q10970 PhosSite:P12071629 PRIDE:Q10970
EnsemblBacteria:EBMYCT00000000305 EnsemblBacteria:EBMYCT00000069167
GeneID:13317715 GeneID:887179 GeneID:925284 KEGG:mtc:MT2990
KEGG:mtu:Rv2922c KEGG:mtv:RVBD_2922c PATRIC:18128344
TubercuList:Rv2922c HOGENOM:HOG000036389 OMA:GDITKFI
ProtClustDB:CLSK881165 Uniprot:Q10970
Length = 1205
Score = 128 (50.1 bits), Expect = 5.5e-07, Sum P(3) = 5.5e-07
Identities = 45/164 (27%), Positives = 80/164 (48%)
Query: 834 LNQNILQEYEHRQRQIEDLSTKQE---ADKKELKRFLAEIDALKEKWLPTLRNLVAQINE 890
+N L+E+ + + LST+ E A +K+L +A++DA + L + +
Sbjct: 1000 VNPLALEEFAALEERYNFLSTQLEDVKAARKDLLGVVADVDA---RILQVFNDAFVDVER 1056
Query: 891 TFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVLSAHHQSGGERSVSTIL 950
F F + GE L E D D I+V+ R G+ ++ SGGE++++ +
Sbjct: 1057 EFRGVFTALFPGGEGRLRLTEPD-DMLTTGIEVEARPPGK-KITRLSLLSGGEKALTAVA 1114
Query: 951 YLVSLQDLTNCPFRVVDEINQGMDPINERKM---FQQLVRAASQ 991
LV++ PF ++DE+ +D +N R++ F+QL R SQ
Sbjct: 1115 MLVAIFRARPSPFYIMDEVEAALDDVNLRRLLSLFEQL-REQSQ 1157
Score = 86 (35.3 bits), Expect = 5.5e-07, Sum P(3) = 5.5e-07
Identities = 48/214 (22%), Positives = 88/214 (41%)
Query: 40 KPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSIGAYVKRGEES----GYIKI 95
+PG + V+GPNGSGKS++V A+A +G R + + G S G ++
Sbjct: 23 EPG--ITAVVGPNGSGKSNVVDALAWVMGEQGAKTLRGGKMEDVIFAGTSSRAPLGRAEV 80
Query: 96 SLRGDTKEEHL-------TIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQ 148
++ D + L +I R++ SE+ NG +V E+ I +
Sbjct: 81 TVSIDNSDNALPIEYTEVSITRRMFRDGASEYEINGSSCRLMDVQELLSDSGIG-REMHV 139
Query: 149 FLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKS-SKLKTIECTVKRNGDTL 207
+ Q ++ E + P E+A G ++H EK+ KL T+ + R D
Sbjct: 140 IVGQGKLEEILQSRPEDRRAFIEEAAG----VLKHRKRKEKALRKLDTMAANLARLTDLT 195
Query: 208 NQLKALNVEQEKDVERVRQRAELLEKVESMKKKL 241
+L+ + E ++ A + + + +L
Sbjct: 196 TELRRQLKPLGRQAEAAQRAAAIQADLRDARLRL 229
Score = 55 (24.4 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 18/59 (30%), Positives = 29/59 (49%)
Query: 658 QKEREEIINIVQIEKRKR-REMENHINLRKRKLESIEKEDDINTALAKLVDQAADLNIQ 715
Q + EEI+ ++R E + RKRK +++ K D + LA+L D +L Q
Sbjct: 143 QGKLEEILQSRPEDRRAFIEEAAGVLKHRKRKEKALRKLDTMAANLARLTDLTTELRRQ 201
Score = 42 (19.8 bits), Expect = 5.5e-07, Sum P(3) = 5.5e-07
Identities = 21/128 (16%), Positives = 58/128 (45%)
Query: 648 RLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVD 707
RL++ + + + +++Q+E + R+ E R + + I+++ A++ D
Sbjct: 739 RLLQQRTEQEAVRTQTLDDVIQLETQLRKAQETQ---RVQVAQPIDRQ-----AISAAAD 790
Query: 708 QAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQ 767
+A + ++ + A+ V + + + + A+ E +A++R + + A+
Sbjct: 791 RARGVEVEA-RLAVRTAEERANAVRGR-ADSLRRAAAAEREARVRAQQARAARLHAAAVA 848
Query: 768 ASLHYEDC 775
A++ DC
Sbjct: 849 AAV--ADC 854
Score = 39 (18.8 bits), Expect = 1.1e-06, Sum P(3) = 1.1e-06
Identities = 25/152 (16%), Positives = 59/152 (38%)
Query: 272 NTLHEFSKPIEGKKQEKAI-LDGDCKKLSSLINENSKRRMDFLEKVDQGVQVQGKYKXXX 330
N L E +E + + +A+ +DGD + ++ S R++ LE + + + +
Sbjct: 620 NDLTEAMGLVEIRPELRAVTVDGDLVG-AGWVSGGSDRKLSTLEVTSEIDKARSELAAAE 678
Query: 331 XXXXXXXXXXXXIL---KARXXXXXXXXXX--QTVPAYEPPHDKIEKLGSQILELGVQAN 385
L AR ++ A ++++ +LG + + N
Sbjct: 679 ALAAQLNAALAGALTEQSARQDAAEQALAALNESDTAISAMYEQLGRLGQEARAAEEEWN 738
Query: 386 QKRLQKSEKEKILNQNKLTLRQCSDRLKDMED 417
+ Q++E+E + Q + Q +L+ ++
Sbjct: 739 RLLQQRTEQEAVRTQTLDDVIQLETQLRKAQE 770
>DICTYBASE|DDB_G0288073 [details] [associations]
symbol:DDB_G0288073 "Nucleoprotein TPR" species:44689
"Dictyostelium discoideum" [GO:0006606 "protein import into
nucleus" evidence=IEA] [GO:0005643 "nuclear pore" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR012929
Pfam:PF07926 dictyBase:DDB_G0288073 GO:GO:0005643 GO:GO:0006606
eggNOG:NOG12793 EMBL:AAFI02000109 KO:K09291 RefSeq:XP_636884.1
ProteinModelPortal:Q54JG6 EnsemblProtists:DDB0187764 GeneID:8626440
KEGG:ddi:DDB_G0288073 InParanoid:Q54JG6 OMA:HTERANS Uniprot:Q54JG6
Length = 2037
Score = 120 (47.3 bits), Expect = 6.2e-07, Sum P(3) = 6.2e-07
Identities = 63/290 (21%), Positives = 133/290 (45%)
Query: 643 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTA- 701
+Q EQ + +K +E + + Q+ K + RK + E ++ + +
Sbjct: 1329 LQEEQENMRTLTVSTRKHQEVLAQLEQMNLFKESNIMLKDETRKLGAQVQELQEKLKQSQ 1388
Query: 702 --LAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWS-YAEKHMASIE-FDAKIRE--LE 755
L L + L + EI+ +EI + WS +K + + D ++ + LE
Sbjct: 1389 DHLLPLTESNKKLLAENQILHNEIEAQKIEITN--WSGKVQKLLNKYQSIDPEVHQKLLE 1446
Query: 756 FN---LKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITP-------ELEK 805
N ++++++L Q ED KK++E +K L D K+Q E + T + +K
Sbjct: 1447 TNETTIRENQELTQQL----EDLKKQLEDLKKQLEDNKKQYEDLKKHTKHWKEEAVKFKK 1502
Query: 806 EFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKR 865
+ LE+ ++ + + Q +S N+ L+E + +++I+ + ++A+K+++++
Sbjct: 1503 DKLELDQSLTQQKELFSTTKQQLDSNTATNEQTLKENQELRKKIQIANANKQANKQQIQQ 1562
Query: 866 FLA---EIDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHES 912
A EI+ALK K L R L A+ + + +++++ + L ES
Sbjct: 1563 QQANNEEIEALK-KQLEDTRKL-AEDYKKLADDYKKLTDEAKSKLKVFES 1610
Score = 84 (34.6 bits), Expect = 6.2e-07, Sum P(3) = 6.2e-07
Identities = 36/161 (22%), Positives = 76/161 (47%)
Query: 378 LELGVQANQKRLQKSEKEKILNQN--KLTLRQCSDRLKDMEDKNNKLLHALRNSGAENIF 435
+++ + +N + L+++++ I + K +++ +RLKD++ NN LLH S ENI
Sbjct: 1196 MQIKIDSNSQELEQAKQSWIQQEQLLKQQIQELEERLKDLKHHNN-LLH----SQIENIN 1250
Query: 436 EAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLEDHVGHYIWKSFITQDAGDRDFLA 495
+ + ++ + + G L++V+ N L++ V + IT+ +
Sbjct: 1251 QQTQQIDRYSQLSSSSSVGNGLVQVSEDE---INNLKELVQVQAREQKITE-VKNESLQQ 1306
Query: 496 KNLKPFDVPILNYVSNESSRKEPFQISEEMRALGISARLDQ 536
+N++ N + E+ K+ + E MR L +S R Q
Sbjct: 1307 ENIRLKSTIAANQKAIETVTKKLQEEQENMRTLTVSTRKHQ 1347
Score = 66 (28.3 bits), Expect = 0.00029, Sum P(3) = 0.00029
Identities = 50/207 (24%), Positives = 90/207 (43%)
Query: 368 DKIEKLGSQILELGVQAN-----QKRLQKSEKEKILNQNKL-TLRQCSDRL-KDMEDKNN 420
+K++ S EL Q N Q+R ++S K+ L QN+L L++ +L K+ ED +
Sbjct: 263 EKVQMTSSFETELNSQKNLASLYQERSEESSKKVTLLQNRLDALKEADKKLRKEHEDAYH 322
Query: 421 KLLHA--LRNSGAENIFEAYCWLQQHRH-ELNKEAYGPVLLEVNVSNRAHANYLEDHVGH 477
K+ A + + + + + + +QH +++ V ++S + L D V
Sbjct: 323 KMEEAYDILEADYQKVIKEFDEFKQHTQANAQNQSFNGVGSSSDLS-QMDIPILSDTVKE 381
Query: 478 YIWKSFITQDAGDRDFLAKNL----KPFDVPILNYVSNESSRKEPFQ--ISEEMRALGIS 531
+ S T G RD L + L + +D + NE K Q +S +R +
Sbjct: 382 RL--SDATT-LGSRDELRRELLDMIQRYD-DLTKIALNEKKEKRYVQDHLSHILREVEKK 437
Query: 532 ARLDQVFDAPHAVKEVLISQFGLDSSY 558
A L + + + +L SQ L +SY
Sbjct: 438 APL--IHEQNREYQRLLKSQEKLLNSY 462
Score = 64 (27.6 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 20/65 (30%), Positives = 36/65 (55%)
Query: 387 KRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAENIFEAYCWLQQHRH 446
+R +K KE+ +KLT R ++ +K+ D +KL+ + N + N F+ L+Q +
Sbjct: 128 ERKEKDLKEETETVSKLTER-LNEFIKEKSDLKSKLI-TVENENSSNEFQIQR-LKQEVN 184
Query: 447 ELNKE 451
EL K+
Sbjct: 185 ELRKQ 189
Score = 59 (25.8 bits), Expect = 6.2e-07, Sum P(3) = 6.2e-07
Identities = 29/123 (23%), Positives = 51/123 (41%)
Query: 131 EVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQL-PVQHCALVEK 189
E+++ R + NL L + EF + ++L G+ QL L+E
Sbjct: 805 ELMDAVVRHQQSIENLNSQLSRSE--EFKSQAELRL----SNIKGENQLIRASEERLIEM 858
Query: 190 SSKLKTIECTVKRNGDTLNQLKALNVEQEKDVER-VRQRAELLEKVE-SMKKKLPWLKYD 247
+ L + +++ D +NQL A E ++ R + LLE +KK+L K
Sbjct: 859 NKTLSLEKLSIENLLDKVNQLNASKESSETELRRRIENDLTLLETQRIQLKKELDQEKQQ 918
Query: 248 MKK 250
K+
Sbjct: 919 HKE 921
Score = 50 (22.7 bits), Expect = 4.9e-06, Sum P(3) = 4.9e-06
Identities = 36/180 (20%), Positives = 73/180 (40%)
Query: 149 FLPQDRVCEFAKLSPVKLLEETE---KAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGD 205
FL +D +F +P+ ++ + E + + +Q + VE ++ + + K D
Sbjct: 15 FLSRDEYNQFIATNPIGIILKAEFKIRQLNQTLESIQAKSQVEVTNSQQLFQQLEKDYMD 74
Query: 206 T---LNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAEYIXXXXXXXX 262
+ + QL N+ +KD++ ++ E K ++ + + L+ + I
Sbjct: 75 SKKDVEQLNKQNITIKKDLQSLKLSIERESKSNTLNRFIDELQQEKSNLHSIIERKEKDL 134
Query: 263 XXXXXXXXXNT--LHEFSKPIEGKKQEKAILDGDCKKLSSLINENSKRRMDFLEKVDQGV 320
T L+EF K EK+ L KL ++ NENS ++++ Q V
Sbjct: 135 KEETETVSKLTERLNEFIK-------EKSDLKS---KLITVENENSSNEFQ-IQRLKQEV 183
Score = 45 (20.9 bits), Expect = 1.5e-05, Sum P(3) = 1.5e-05
Identities = 21/96 (21%), Positives = 45/96 (46%)
Query: 218 EKDVERV-RQRA----ELLEKVESMKKKLPWLKYDMKKAEYIXXXXXXXXXXXXXXXXXN 272
+KD E+V + R+ ELL K+E M+++ LK + + + +
Sbjct: 733 QKDYEQVMKDRSISDKELLGKIEQMREQNTSLKIQISQIQ-----SENTIFKERLQISTD 787
Query: 273 TLHEFSKPIEG-KKQEKAILDGDCKKLSSLINENSK 307
++ S+ +E +K+ + ++D + S+ N NS+
Sbjct: 788 SVKNQSQDLEQYRKKNQELMDAVVRHQQSIENLNSQ 823
Score = 43 (20.2 bits), Expect = 2.4e-05, Sum P(3) = 2.4e-05
Identities = 27/137 (19%), Positives = 59/137 (43%)
Query: 183 HCALVEKSSKLKTIECTVKRNGDTLNQ-LKALNVEQEKDVERVRQRAELLEKVESMKKKL 241
H + K LK TV + + LN+ +K + + K + + + +++ +K+++
Sbjct: 124 HSIIERKEKDLKEETETVSKLTERLNEFIKEKSDLKSKLITVENENSSNEFQIQRLKQEV 183
Query: 242 PWLKYDMKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSL 301
L+ K+ ++ L F+ ++ K + +A + KL+
Sbjct: 184 NELR---KQTTFLEDSQKQTTNNLFNEI--KELKSFNLELKLKNENQA---DEILKLNQ- 234
Query: 302 INENSKRRMDFLEKVDQ 318
IN+N K++ LEK +Q
Sbjct: 235 INQNLKKQTSELEKKNQ 251
Score = 42 (19.8 bits), Expect = 3.0e-05, Sum P(3) = 3.0e-05
Identities = 9/56 (16%), Positives = 32/56 (57%)
Query: 191 SKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQ-----RAELLEKVESMKKKL 241
S++++++ + + D + K++ + E D+ ++++ + EL E+++ + +L
Sbjct: 1033 SEIESLKDLLAQEKDNIVHYKSIAISNENDLSQLKEEYTKTKVELEERLKDAQAEL 1088
Score = 41 (19.5 bits), Expect = 3.8e-05, Sum P(3) = 3.8e-05
Identities = 9/31 (29%), Positives = 19/31 (61%)
Query: 203 NGDTLNQLKALNVEQEKDVERVRQRAELLEK 233
+ TL Q + N +++E+++Q +LL+K
Sbjct: 704 SSSTLIQQQQSNEILTQELEKIKQSYQLLQK 734
>ZFIN|ZDB-GENE-030131-8984 [details] [associations]
symbol:pleca "plectin a" species:7955 "Danio
rerio" [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0003779 "actin
binding" evidence=IEA] InterPro:IPR001101 InterPro:IPR001452
InterPro:IPR001589 InterPro:IPR001715 Pfam:PF00307 Pfam:PF00681
PROSITE:PS00019 PROSITE:PS00020 PROSITE:PS50021 SMART:SM00033
SMART:SM00250 SMART:SM00326 ZFIN:ZDB-GENE-030131-8984 GO:GO:0005856
Gene3D:1.10.418.10 InterPro:IPR018159 SMART:SM00150 SUPFAM:SSF47576
GeneTree:ENSGT00700000104214 EMBL:BX957242 EMBL:CR855260
IPI:IPI00972187 Ensembl:ENSDART00000090669 ArrayExpress:E7F8G7
Bgee:E7F8G7 Uniprot:E7F8G7
Length = 4762
Score = 132 (51.5 bits), Expect = 7.3e-07, Sum P(3) = 7.3e-07
Identities = 60/227 (26%), Positives = 108/227 (47%)
Query: 647 QRLIEDEAAKLQKEREEI--INIVQIEKRKRREMENHINLRKRKL-ESI--EKEDDINTA 701
++L+E+EA ++K EE +NI E + R++ ++R+L E + EK+ I A
Sbjct: 2448 KKLLEEEAENMKKLAEEAARLNIEAQEAARLRQIAESDLAKQRELAEKMLEEKKQAIQEA 2507
Query: 702 LAKLVDQAADLNIQQFKYAIEIKNLLV---EIVSCKWSYAEKHMASIEFDAKIRELEFNL 758
AKL +A L Q+ + +E + LL E+ E S+E + K R+LE
Sbjct: 2508 -AKLKAEAEKLQKQKDQAQVEAQKLLEAKKEMQQRLDQETEGFQKSLEAERK-RQLEITA 2565
Query: 759 KQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELE 818
+ EKL ++ + D + + E K K+QA+ I E EK E T +E+LE
Sbjct: 2566 EA-EKLKVKVT-QLSDAQSKAEEEAKKF---KKQADEIKIRLQETEKHTSEKHTVVEKLE 2620
Query: 819 AAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKR 865
+ +A+ + ++ +E E +++ DL KQ + +++
Sbjct: 2621 VQRLQSKQEADGLHKAIADLEKEKEKLKKEAADLQ-KQSKEMANVQQ 2666
Score = 119 (46.9 bits), Expect = 1.5e-05, Sum P(3) = 1.5e-05
Identities = 53/244 (21%), Positives = 110/244 (45%)
Query: 646 EQRLIEDEAAKLQKERE----EIINIVQIEKRKRREMENHINLRKRKLESIEKED-DINT 700
E ++ EA KLQK+++ E +++ +K ++ ++ ++ LE+ K +I
Sbjct: 2506 EAAKLKAEAEKLQKQKDQAQVEAQKLLEAKKEMQQRLDQETEGFQKSLEAERKRQLEITA 2565
Query: 701 ALAKLVDQAADLNIQQFKYAIEIKNLLVEI--VSCKWSYAEKHMASIEFDAKIRELEFNL 758
KL + L+ Q K E K + + + EKH + E + +LE
Sbjct: 2566 EAEKLKVKVTQLSDAQSKAEEEAKKFKKQADEIKIRLQETEKHTS--EKHTVVEKLEVQR 2623
Query: 759 KQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTI--EE 816
Q ++ A D +KE E +K +D ++Q++ +A +++E L+ TI +
Sbjct: 2624 LQSKQEADGLHKAIADLEKEKEKLKKEAADLQKQSKEMA----NVQQEQLQQEKTILQQS 2679
Query: 817 LEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKK----ELKRFLAEIDA 872
A + + + +I + + +++E ++ E L +QE +K E K+ + +DA
Sbjct: 2680 FFAEKETLLKKEKAIEEEKKKLEKQFEDEVKKAEALKAEQERQRKLMEEERKKLQSAMDA 2739
Query: 873 LKEK 876
+K
Sbjct: 2740 AIKK 2743
Score = 118 (46.6 bits), Expect = 1.9e-05, Sum P(3) = 1.9e-05
Identities = 79/363 (21%), Positives = 167/363 (46%)
Query: 647 QRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKL- 705
Q+ I +E K +K EE I+I+++ K + + L +KL+ I E + A A+
Sbjct: 2103 QKKIVEETLKQRKVVEEEIHILKLNFEKASSGKQELELELKKLKGIADETQKSKAKAEEE 2162
Query: 706 VDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLA 765
++ L +++ K E + + +I + + A +H A+ E ++ +L K+ +++A
Sbjct: 2163 AEKFRKLALEEEKKRKEAEAKVKQIQAAEEEAARQHKAAQEEVGRLMKLAEEAKKQKEIA 2222
Query: 766 LQASLHYEDCKKEVEHCRKHLSDAKRQAESI-------AFITPELEKEFLEMPTTIEELE 818
+ + E V+ + S A+++A+++ + +L++EF + +E E
Sbjct: 2223 EKEA---EKQVILVQEAAQKCSAAEQKAQNVLVQQNKDSMAQDKLKEEFEKAKKLAQEAE 2279
Query: 819 AAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQ------------EADKKELKRF 866
A +DN + ++ L++ +E E +++ E + KQ EA+K+ +R
Sbjct: 2280 KA-KDNAEKEAAL--LHKKA-EEAERQKKAAEAEAAKQAKAQEDAEKLRKEAEKEASRRA 2335
Query: 867 LAEIDALKEKWLPTLRNLVAQINETFSRNF-QEMAVAGE-VSLDEHESDFDKFGILIKVK 924
AE ALK K + +A+ + + Q+ +V E V + + DK ++ V+
Sbjct: 2336 EAEAAALKLK--QEADSEMAKYKKLAEKTLKQKSSVEEELVKVKVQLDETDKQKSVLDVE 2393
Query: 925 FRQSGQLEVLSAHHQSGG-ERSVSTILYLVSLQDLTNCPFRVVDEINQGM--DPINERKM 981
++ Q EV A Q E +S + + ++DL ++ E + M D N +K+
Sbjct: 2394 LKRLKQ-EVSDAIKQKAQVEDELSKVK--IQMEDLLKLKLKIEKENQELMKKDKDNTKKL 2450
Query: 982 FQQ 984
++
Sbjct: 2451 LEE 2453
Score = 80 (33.2 bits), Expect = 7.3e-07, Sum P(3) = 7.3e-07
Identities = 40/176 (22%), Positives = 82/176 (46%)
Query: 70 DTQLLG-RATSIGAYVKRG---EESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGK 125
+T+LL RA ++ A R EE+ ++ + +T+++ + + + KSE
Sbjct: 1669 ETELLQLRAKAVDADKLRNAAQEEAEKLRKQVAEETQKKRKA---EEELKRKSE-AEKDA 1724
Query: 126 VVPKGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCA 185
K + LE ++F +Q + L Q E K ++++EE K QL + A
Sbjct: 1725 AKEKKKALEDLEKFKLQAEEAERHLKQ---AELEKQRQIQVVEEVAKKTAATQLESKQVA 1781
Query: 186 LVEK-SSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKK 240
L + LK + V + + LK +Q+ + ++ R++AE +++E+ ++K
Sbjct: 1782 LTARLEESLKNEQVMVIQLQEEAEHLK----KQQAEADKAREQAE--KELETWRQK 1831
Score = 75 (31.5 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 40/190 (21%), Positives = 78/190 (41%)
Query: 137 KRFNIQVNNLTQFLPQDRVCE-FAKLSPVKLLEETEKAV--GDPQLPVQHCALVEKSSKL 193
K N+ V + QD++ E F K KL +E EKA + + + H E +
Sbjct: 2246 KAQNVLVQQNKDSMAQDKLKEEFEKAK--KLAQEAEKAKDNAEKEAALLHKKAEEAERQK 2303
Query: 194 KTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAEY 253
K E + + L E EK+ R RAE + ++K K + D + A+Y
Sbjct: 2304 KAAEAEAAKQAKAQEDAEKLRKEAEKEASR---RAEA--EAAALKLKQ---EADSEMAKY 2355
Query: 254 IXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENSKRRMDFL 313
L + ++ ++K++LD + K+L +++ K++
Sbjct: 2356 ---KKLAEKTLKQKSSVEEELVKVKVQLDETDKQKSVLDVELKRLKQEVSDAIKQKAQVE 2412
Query: 314 EKVDQGVQVQ 323
+++ + V++Q
Sbjct: 2413 DELSK-VKIQ 2421
Score = 61 (26.5 bits), Expect = 7.3e-07, Sum P(3) = 7.3e-07
Identities = 47/252 (18%), Positives = 91/252 (36%)
Query: 208 NQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAEYIXXXXXXXXXXXXX 267
N+ A E EK E ++ A+ K E K + + + E
Sbjct: 1847 NKKTAAQEEAEKQKEEAKREAKKRAKAEEAALK----QKEAAEMELGNQRKMAEETAKQK 1902
Query: 268 XXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENSKRRMDFLE---KVDQGVQV-- 322
L E +Q++ +LD + ++L + +N K++ + E KV + +++
Sbjct: 1903 LAAEQELIRLRADFEHAEQQRTVLDDELQRLKNDVNSAVKQKKELEEELIKVRKEMEILL 1962
Query: 323 QGKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPAYEPPHDKIEKLGSQILELGV 382
Q K K +L++ T K ++ QI E
Sbjct: 1963 QQKSKAEKETMSNTEKSKQ-LLESEAAKMRELAEEATKLRSVAEEAKKQR---QIAEEEA 2018
Query: 383 QANQKRLQKSEKEKILNQNKLT-LR-QCSDRLKDMEDKNNKLLHALRNSGAEN-IFEAYC 439
+ +K KEK+ N+ T L+ + LK+ E +N++L G + + E
Sbjct: 2019 ARQRAEAEKILKEKLTAINEATRLKTEAEIALKEKEAENDRLKRKAEEEGYQRKVLEDQA 2078
Query: 440 WLQQHRHELNKE 451
QH+ + ++
Sbjct: 2079 --AQHKQAIEEK 2088
Score = 55 (24.4 bits), Expect = 2.9e-06, Sum P(3) = 2.9e-06
Identities = 75/400 (18%), Positives = 149/400 (37%)
Query: 187 VEKSSKLKT-IECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLK 245
+ ++++LKT E +K ++LK E+E +V + K +++++K+ LK
Sbjct: 2036 INEATRLKTEAEIALKEKEAENDRLKR-KAEEEGYQRKVLEDQAAQHK-QAIEEKIGQLK 2093
Query: 246 YDMKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINEN 305
E +H E K L+ + KKL + +E
Sbjct: 2094 KS-SDTELDRQKKIVEETLKQRKVVEEEIHILKLNFEKASSGKQELELELKKLKGIADET 2152
Query: 306 SKRRMDFLEKVDQ--GVQVQGKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVP-A 362
K + E+ ++ + ++ + K AR + + A
Sbjct: 2153 QKSKAKAEEEAEKFRKLALEEEKKRKEAEAKVKQIQAAEEEAARQHKAAQEEVGRLMKLA 2212
Query: 363 YEPPHDK--IEKLGSQILELGVQANQKRLQKSEKEK--ILNQNKLTLRQCSDRLKDMEDK 418
E K EK + + L +A QK +K + ++ QNK ++ Q D+LK+ +K
Sbjct: 2213 EEAKKQKEIAEKEAEKQVILVQEAAQKCSAAEQKAQNVLVQQNKDSMAQ--DKLKEEFEK 2270
Query: 419 NNKLLHALRNSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLEDHVGHY 478
KL + +N + L + E ++ E + +A A + +
Sbjct: 2271 AKKLAQEAEKA-KDNAEKEAALLHKKAEEAERQKKAA---EAEAAKQAKAQEDAEKLRKE 2326
Query: 479 IWKSFITQDAGDRDFLAKNLKP-FDVPILNYVS-NESSRKEPFQISEEMRALGISARLDQ 536
K + + A LK D + Y E + K+ + EE+ + + +LD+
Sbjct: 2327 AEKE--ASRRAEAEAAALKLKQEADSEMAKYKKLAEKTLKQKSSVEEEL--VKVKVQLDE 2382
Query: 537 VFDAPHAVKEVLISQFGLDSSYIGSKETDQKADNVAKLGI 576
D +V +V + + + S K+ Q D ++K+ I
Sbjct: 2383 T-DKQKSVLDVELKRLKQEVSD-AIKQKAQVEDELSKVKI 2420
>TIGR_CMR|SO_2898 [details] [associations]
symbol:SO_2898 "SMC family protein" species:211586
"Shewanella oneidensis MR-1" [GO:0005524 "ATP binding"
evidence=ISS] [GO:0007059 "chromosome segregation" evidence=ISS]
[GO:0030261 "chromosome condensation" evidence=ISS]
InterPro:IPR024704 HAMAP:MF_01894 InterPro:IPR011890
PIRSF:PIRSF005719 InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524
GO:GO:0005737 GO:GO:0003677 GO:GO:0006260 GO:GO:0006281
EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0006310 GO:GO:0030261
GO:GO:0007062 KO:K03529 TIGRFAMs:TIGR02168 HSSP:Q9X0R4
HOGENOM:HOG000036391 RefSeq:NP_718470.1 ProteinModelPortal:Q7ZAJ7
GeneID:1170588 KEGG:son:SO_2898 PATRIC:23525438 OMA:ELYVEEK
ProtClustDB:CLSK906922 Uniprot:Q7ZAJ7
Length = 1145
Score = 101 (40.6 bits), Expect = 8.5e-07, Sum P(4) = 8.5e-07
Identities = 35/158 (22%), Positives = 71/158 (44%)
Query: 834 LNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLVAQINETFS 893
+N ++E+E + + L + E K L I + ++ + +NE
Sbjct: 945 INLAAIEEFEQQSERKSYLDHQDEDLNKGLATLEEAIRKIDKETRTRFKATFDAVNEDLG 1004
Query: 894 RNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVLSAHHQSGGERSVSTILYLV 953
R F ++ G L E D + G+ I + G+ + H SGGE++++ + +
Sbjct: 1005 RLFPKVFGGGRAYLALTEDDLLETGVTIMAQ--PPGKKNS-TIHLLSGGEKALTALSLVF 1061
Query: 954 SLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQ 991
++ L PF ++DE++ +D N + F +L++ SQ
Sbjct: 1062 AIFRLNPAPFCMLDEVDAPLDDANVER-FCRLLKEMSQ 1098
Score = 95 (38.5 bits), Expect = 8.5e-07, Sum P(4) = 8.5e-07
Identities = 47/231 (20%), Positives = 99/231 (42%)
Query: 25 EIELHNFMTFDHLICKPGSR-LNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSIGAY 83
+I+L F +F P + L+ +IGPNG GKS+++ A+ LG + R S+
Sbjct: 5 QIKLAGFKSFVDPTKIPFLQALSAIIGPNGCGKSNVIDAVRWVLGESSAKHLRGDSMSDV 64
Query: 84 VKRGEESGYIKISLRG-----DTKE----------EHLTIMRKIDTRNKSEWFFNGKVVP 128
+ G S +S+ G + KE E +++ R++ +S +F NG+
Sbjct: 65 IFNGS-SARKPVSVAGVELVFENKEGRLAGQYASYEEISVKRQVSRDGESWYFLNGQKCR 123
Query: 129 KGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVE 188
+ ++ ++ + + + Q + + P L E+A G +
Sbjct: 124 RKDITDLFMGTGLGPRSYA-IIEQGTISRLIESKPQDLRTFIEEAAGISRY--------- 173
Query: 189 KSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKK 239
K + +T E ++ + L +L + E K ++++ Q+A+ + +K+
Sbjct: 174 KERRRET-ESRIRHTRENLERLGDIRSELGKQLDKLSQQAKAATQYRELKQ 223
Score = 56 (24.8 bits), Expect = 8.5e-07, Sum P(4) = 8.5e-07
Identities = 13/64 (20%), Positives = 30/64 (46%)
Query: 369 KIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRN 428
+ ++L SQ+ L Q N LQ++ + + ++L + +L + ++ + A
Sbjct: 236 RFQELQSQMASLSEQINSLELQQAAAQSLAQTSELESTELQVKLSQLAEQEQHAVEAYYL 295
Query: 429 SGAE 432
+G E
Sbjct: 296 TGTE 299
Score = 46 (21.3 bits), Expect = 8.5e-07, Sum P(4) = 8.5e-07
Identities = 21/71 (29%), Positives = 36/71 (50%)
Query: 645 TEQRLIEDEAAKLQKEREEIINIV--QIEKRKRREM---ENH--INLRKRKLESIEKEDD 697
TE L ED +A L +E E + ++ QIE + E+ EN ++L + + E + +
Sbjct: 430 TEHAL-EDTSASLSQEIELLEQVITQQIEVNQELELALVENTQALDLARGEFEQLSQRLT 488
Query: 698 INTALAKLVDQ 708
A +LV+Q
Sbjct: 489 SMRARFELVEQ 499
Score = 46 (21.3 bits), Expect = 3.7e-05, Sum P(4) = 3.7e-05
Identities = 17/77 (22%), Positives = 34/77 (44%)
Query: 358 QTVPAYEPPHDKIEKLGSQILELGVQANQ--KRLQKSEKEKILNQNKLTLRQCSDRLKDM 415
+ V A K+++L Q++++ NQ +RL + + +K +L + K
Sbjct: 643 ECVQARAIQQSKLDELSQQLIQVRDSVNQGTQRLHQLQLDKATKSTQLNNAEAL--AKQR 700
Query: 416 EDKNNKLLHALRNSGAE 432
E K +L + + AE
Sbjct: 701 EAKRGQLEDTVARTHAE 717
Score = 44 (20.5 bits), Expect = 1.3e-06, Sum P(4) = 1.3e-06
Identities = 16/57 (28%), Positives = 27/57 (47%)
Query: 652 DEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQ 708
+ A L K+RE Q+E R L + + E+ED++ ALA+ +D+
Sbjct: 691 NNAEALAKQREAKRG--QLEDTVARTHAELAELAGQLMLLAEQEDELADALAQSIDK 745
Score = 40 (19.1 bits), Expect = 3.9e-05, Sum P(5) = 3.9e-05
Identities = 10/47 (21%), Positives = 25/47 (53%)
Query: 386 QKRLQ-KSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGA 431
Q +LQ + + K+++Q +L + + ++ ++ HAL ++ A
Sbjct: 393 QHKLQLELHRSKLVHQQQLNAHKTQLHQEQQQELSSLTEHALEDTSA 439
Score = 39 (18.8 bits), Expect = 3.7e-05, Sum P(4) = 3.7e-05
Identities = 9/36 (25%), Positives = 20/36 (55%)
Query: 276 EFSKPIEGKKQEKAILDGDCKKLSSLINENSKRRMD 311
+ + ++ +KQ A L ++LS + +N K ++D
Sbjct: 302 KLEQQLQSQKQRDAQLHTQLEQLSEQLTQN-KAKLD 336
Score = 37 (18.1 bits), Expect = 5.7e-05, Sum P(4) = 5.7e-05
Identities = 14/46 (30%), Positives = 19/46 (41%)
Query: 360 VPAYEPPHDKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTL 405
V AY +I KL Q+ + Q Q + + L QNK L
Sbjct: 290 VEAYYLTGTEIAKLEQQLQSQKQRDAQLHTQLEQLSEQLTQNKAKL 335
>UNIPROTKB|F1SQ11 [details] [associations]
symbol:EEA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0030742 "GTP-dependent protein binding"
evidence=IEA] [GO:0019897 "extrinsic to plasma membrane"
evidence=IEA] [GO:0006906 "vesicle fusion" evidence=IEA]
[GO:0006897 "endocytosis" evidence=IEA] [GO:0005969
"serine-pyruvate aminotransferase complex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005769 "early endosome"
evidence=IEA] [GO:0005545 "1-phosphatidylinositol binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000306 InterPro:IPR007087 InterPro:IPR015880
Pfam:PF01363 PROSITE:PS00028 PROSITE:PS50157 SMART:SM00064
SMART:SM00355 GO:GO:0005829 GO:GO:0046872 GO:GO:0005545
GO:GO:0008270 GO:GO:0006897 GO:GO:0019897 Gene3D:3.30.40.10
InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS50178 GO:GO:0005769 GO:GO:0006906
OMA:LKEQCKT GO:GO:0005969 GeneTree:ENSGT00700000104373
EMBL:CU457729 EMBL:FP102822 Ensembl:ENSSSCT00000000996
Uniprot:F1SQ11
Length = 1411
Score = 136 (52.9 bits), Expect = 8.9e-07, Sum P(2) = 8.9e-07
Identities = 72/287 (25%), Positives = 132/287 (45%)
Query: 668 VQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAADLNIQQFKYAIEIKNLL 727
VQIE + + E +L K K S + + +IN+ +L QA + Q+ K +++ +
Sbjct: 903 VQIESAHKEQNELKNSLEKEKETSHQLKLEINSMQGQLT-QAQNSLKQKEKEEQQLQGNI 961
Query: 728 VEIVSCKWSYAEKHMASIEFDAKIR-----ELEFNLKQHEKLALQASLHYEDCKKEVEHC 782
E+ +K + +++ + KI ELE L+Q A Q ++ +++
Sbjct: 962 NELKQLT-EQKKKQIEALQGEVKIAVSQKTELENKLQQQSTQAAQELAAEKEKISVLQNA 1020
Query: 783 RKHLSDAKRQAESIAF-ITPELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQN-ILQ 840
+ + +Q +S + EL ++ + E+L A +D IS N I NQN ++Q
Sbjct: 1021 YEKNQENLKQLQSDFYGKESELLATRQDLKSVEEKLSLAQEDLISNRNQIG--NQNKLIQ 1078
Query: 841 EYEHRQRQIEDLSTKQEADKKELKRFLAEID---ALKEKWLPTLRNLVAQINETFSRNFQ 897
E + + +E S K+E KE + L ++ +LKEK L ++ +A+I E R +
Sbjct: 1079 ELKTARTTLEQDSAKKEEQLKEQCKALQDVQKEKSLKEKELVNEKSKLAEIEEIKCRQEK 1138
Query: 898 EMAVAGEVSLDEHESDF--------DKFGILIKVKFRQSGQLEVLSA 936
E+A E L H+ + D +LI+ K G+++ L A
Sbjct: 1139 EIAKLSE-ELKSHKQESIKEVTNLKDARQLLIQQKLELQGKVDSLKA 1184
Score = 118 (46.6 bits), Expect = 6.8e-05, Sum P(2) = 6.8e-05
Identities = 57/253 (22%), Positives = 110/253 (43%)
Query: 643 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMEN-HINLRKRKLESIEKEDDINTA 701
+Q E+ L E E L E+ ++ I +I+ R+ +E+ L+ K ESI++ ++ A
Sbjct: 1108 VQKEKSLKEKE---LVNEKSKLAEIEEIKCRQEKEIAKLSEELKSHKQESIKEVTNLKDA 1164
Query: 702 LAKLVDQAADLN--IQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLK 759
L+ Q +L + K +E + +++ + E + EF K +L +K
Sbjct: 1165 RQLLIQQKLELQGKVDSLKATLEQEKKNQQMLKEQMKKEEDELKR-EFMEKETKLHSEIK 1223
Query: 760 QHEKLALQASLHYEDCKKEVEHC--RKHLSDAKRQAESIAFITPELEKEFLEMPTTIEEL 817
EK A + K+ ++ ++L K++ +S ELEK+ ++ I L
Sbjct: 1224 --EKAAAVQKHEENEAKRTMQMTALNENLGTVKKEWQSSQRRVSELEKQTDDLRGEIAVL 1281
Query: 818 EAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKW 877
EA +Q+N + ++ E E Q ++ +L K + ++ E +L+ K
Sbjct: 1282 EATVQNNQDERRALLERCLKGEGEIEKLQTKVLELQRKLDNTTAAVQELGRENQSLQIKH 1341
Query: 878 LPTLRNLVAQINE 890
L A+ NE
Sbjct: 1342 TQALNRKWAEDNE 1354
Score = 115 (45.5 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 60/266 (22%), Positives = 116/266 (43%)
Query: 653 EAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDIN-TALAKLVDQAAD 711
E K++ E+E ++ + K K ++ + +L+ K E EKE A+ L D
Sbjct: 840 ELQKVKMEKETLVTELSAAKEKLSKVSD--SLKNSKSE-FEKESQKGKAAILDLEKTCKD 896
Query: 712 LNIQ---QFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDA---KIRELEFNLKQHEKLA 765
L Q Q + A + +N L S + H +E ++ ++ + + +LKQ EK
Sbjct: 897 LKHQLQVQIESAHKEQNELKN--SLEKEKETSHQLKLEINSMQGQLTQAQNSLKQKEKEE 954
Query: 766 LQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNI 825
Q + + K+ E +K + + + + ELE + + T + AA ++ I
Sbjct: 955 QQLQGNINELKQLTEQKKKQIEALQGEVKIAVSQKTELENKLQQQSTQAAQELAAEKEKI 1014
Query: 826 SQANSIFFLNQ-NILQ-EYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRN 883
S + + NQ N+ Q + + ++ E L+T+Q+ E K LA+ D + + +N
Sbjct: 1015 SVLQNAYEKNQENLKQLQSDFYGKESELLATRQDLKSVEEKLSLAQEDLISNRNQIGNQN 1074
Query: 884 LVAQINETFSRNFQEMAVAGEVSLDE 909
+ Q +T ++ + E L E
Sbjct: 1075 KLIQELKTARTTLEQDSAKKEEQLKE 1100
Score = 72 (30.4 bits), Expect = 8.9e-07, Sum P(2) = 8.9e-07
Identities = 75/412 (18%), Positives = 148/412 (35%)
Query: 130 GEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEK 189
GE E T++ +++ + + Q EF +L + +E ++ H L+E
Sbjct: 368 GEKGEATQKLKEELSEV-ETKHQHLKAEFKQLQQQREEKEQHGLQLQSEINQLHSKLLET 426
Query: 190 SSKLKTIECTVKRNGDTLNQLKALNVEQE-KDVERVRQRAE--LLEKVESMKKKLPWLKY 246
+L +K L+ K ++ EQ+ D++ R E L EKV + + L
Sbjct: 427 ERQLGEAHGRLKEQRQ-LSSEKLMDKEQQVADLQLKLSRLEEELKEKVANSTELQHQL-- 483
Query: 247 DMKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENS 306
D K ++ N L + + I K Q+ L+ +K I+
Sbjct: 484 DKTKQQHQEQQALQQSTTAKLREAQNDLEQVLRQIGDKDQKIQNLEALLQKSKENISLLE 543
Query: 307 KRRMDFLEKVDQGVQVQGKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPAYEPP 366
K R D K+ G +G+ + + + A E
Sbjct: 544 KEREDLYAKIQAG---EGETAVLNQLQEKNHILQEQVTQLTEKLKNQSESHKQ--AQENL 598
Query: 367 HDKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDK--NNKLLH 424
HD++++ + + + SE LN++K + Q ++K + + +
Sbjct: 599 HDQVQEQKAHLRAAQDRVLSLEASISELSSQLNESKEKVSQLDIQIKAKTELLLSAEAAK 658
Query: 425 ALRNSGAENIFE-AYCWLQQHRHELNKEAYGPVLLEVNVSNRA-HANYLEDHVGHYIWKS 482
+ + +N + A LQ + ELNK + + ++ H LE H+ Y K
Sbjct: 659 TAQRADLQNHLDTAQNALQDKQQELNKITTQLDQVTTKLQDKQEHCGQLESHLKEYKEKH 718
Query: 483 FITQDAGDRDFLAKNLKPFDVPILNYVSNESSRKEPFQISEEMRALGISARL 534
+ + L +K + L ++S+++ Q ++ R L L
Sbjct: 719 LSLEQKTEE--LEGQIKKLEADSLEV---KASKEQALQDLQQQRQLNTDLEL 765
Score = 51 (23.0 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 11/46 (23%), Positives = 24/46 (52%)
Query: 273 TLHEFSKPIEGKKQEKAILDGDCKKLSSLINENSKRRMDFLEKVDQ 318
T+ + + QE A+ + +KL S +NE +++ + EK+ +
Sbjct: 268 TISQLRSELAKGPQEVAVYVQELQKLKSSVNELTQKNQNLTEKLQK 313
>WB|WBGene00010306 [details] [associations]
symbol:F59A2.6 species:6239 "Caenorhabditis elegans"
[GO:0000042 "protein targeting to Golgi" evidence=IEA]
InterPro:IPR000237 Pfam:PF01465 PROSITE:PS50913 SMART:SM00755
EMBL:Z34801 GeneTree:ENSGT00700000104373 GO:GO:0000042
Gene3D:1.10.220.60 SUPFAM:SSF101283 EMBL:Z66514 PIR:T22976
RefSeq:NP_497706.1 UniGene:Cel.10377 HSSP:Q13439
ProteinModelPortal:G5EEK2 SMR:G5EEK2 IntAct:G5EEK2
EnsemblMetazoa:F59A2.6 GeneID:175445 KEGG:cel:CELE_F59A2.6
CTD:175445 WormBase:F59A2.6 OMA:QTRKDID NextBio:888194
Uniprot:G5EEK2
Length = 1133
Score = 152 (58.6 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 52/248 (20%), Positives = 114/248 (45%)
Query: 643 MQTEQRLIEDEAAKLQKEREEII---NIVQIEKRKRREMENHINLRKRKLESIEKE-DDI 698
+ +EQ ++++ KL++ EE++ +Q K E E + K +LE++ K+ D
Sbjct: 125 LNSEQNILDEVTKKLEQSEEEVLAARGAIQELTEKLEESEKETSTAKTELEAVSKKLDSS 184
Query: 699 NTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKI--RELEF 756
T+L + D + IQ + K+ VE++ K EK+M+ +E ++
Sbjct: 185 ETSLKEFSDMIEAMKIQLINCEKQ-KDEAVELLKQKLEEVEKNMSDVEVQKQLLLESTTS 243
Query: 757 NLKQHEKLALQASLHYEDCKKEVEHCRK------HLSDAKRQAESIAF--ITPELEKEFL 808
+KQH + A E+ + +E+ +K +L A ES A IT ++E
Sbjct: 244 EMKQHAEAAEIVKKQLEEAQSSIENLKKDAENERNLKTALESDESSAISEITKQMEAAKK 303
Query: 809 EMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHR-QRQIEDLSTKQEADKKELKRFL 867
E+ + +E ++ +++ + + + Q +Q+ + + ++ ++ E +K ++
Sbjct: 304 ELEASEKE-KSELREQMDRLQKVHNAGQEDIQKLQKTWELEMAKIAKSTEDEKLAREQLA 362
Query: 868 AEIDALKE 875
E++ KE
Sbjct: 363 GELENAKE 370
Score = 112 (44.5 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 63/286 (22%), Positives = 132/286 (46%)
Query: 646 EQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHIN--LR------KRKLESIEKE-- 695
E+ ++ + +L E+EE + +V+++ ++ + + + LR + KL+ IE+E
Sbjct: 577 EKEHLQAQLHQLGVEKEEKLEMVKVQLQQAAQSSSSVEQALRAEIEKLEAKLQEIEEEKK 636
Query: 696 DDINTALAKLVDQAADLN-IQQFKYAIEI-KNLLVEIVSCKWSYAEKHMASIE--FDAKI 751
+ +N +LA+ Q A + +Q + +E+ K +E+V + A + +S+E A+I
Sbjct: 637 NALNASLAEKEQQTAQIQELQAQLHQLEVEKEEKLEMVKVQLQQAAQSSSSVEQALRAEI 696
Query: 752 RELEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAF--ITPELEKEFLE 809
+LE L++ EK +Q S E +E+ + + K + E IA I +L E
Sbjct: 697 EKLEAKLQEIEKAKMQNSSKREQKVRELSNLNE-----KMRVEFIAKEKIISDLRSELST 751
Query: 810 MPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAE 869
+ T + +A ++ + + + E+ + +E++ + E KEL+ +
Sbjct: 752 ISTELVVQKATVEKTKMDFGELETREKRATADRENEK--MEEIRLR-ETFAKELETMGSA 808
Query: 870 IDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDE-HESDF 914
++ +KE L+ + + F+E + S DE ES F
Sbjct: 809 LE-VKETAYNELKASAEKKIAKLTSQFEEKLKKAQNSQDEASESRF 853
Score = 107 (42.7 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 55/279 (19%), Positives = 132/279 (47%)
Query: 651 EDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAA 710
E + A++Q + +I + ++EK ++ E+ + L++ S E+ + + +L +A
Sbjct: 504 EQQTAQIQNLQTQIYQM-EVEKEEKVELVK-VQLQQAAQSSSSAEEALRAEIEQL--EAK 559
Query: 711 DLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKL------ 764
++Q K A + +LL E + A+ H +E + K+ ++ L+Q +
Sbjct: 560 LKAVEQAK-AEALNSLLAEKEHLQ---AQLHQLGVEKEEKLEMVKVQLQQAAQSSSSVEQ 615
Query: 765 ALQASLHYEDCK-KEVEHCRKH-----LSDAKRQAESIAFITPELEKEFLEMPTTIEELE 818
AL+A + + K +E+E +K+ L++ ++Q I + +L + +E +E ++
Sbjct: 616 ALRAEIEKLEAKLQEIEEEKKNALNASLAEKEQQTAQIQELQAQLHQLEVEKEEKLEMVK 675
Query: 819 AAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWL 878
+Q ++S+ + +++ E + ++IE + Q + K+E K + E+ L EK
Sbjct: 676 VQLQQAAQSSSSVEQALRAEIEKLEAKLQEIEK-AKMQNSSKREQK--VRELSNLNEKMR 732
Query: 879 PTL---RNLVAQINETFSRNFQEMAVAGEVSLDEHESDF 914
+++ + S E+ V + ++++ + DF
Sbjct: 733 VEFIAKEKIISDLRSELSTISTELVVQ-KATVEKTKMDF 770
Score = 84 (34.6 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 92/440 (20%), Positives = 167/440 (37%)
Query: 151 PQDRVCEFAKLSPVK---LLEETEK-AVGDPQLPVQHCALVEKSSKLKTIECTVKRNG-- 204
P + C F L + L E+ E+ + Q + +V++ S+L+ E K +
Sbjct: 3 PNEENCFFISLFEAEKKALAEKCEELTLKFEQADKEKNEMVQQLSRLQQ-EMLEKCDALQ 61
Query: 205 DTLNQLKALNVEQEKDVERVRQRAELLE-KVESMKKKLPWLKYDMKKAEYIXXXXXXXXX 263
+N+ KAL E + + V Q+AE ++ ++E KK L K + +
Sbjct: 62 AEVNEAKALREEIQAKYDDVTQKAERIQGELEESKKVLESEKQAFENEKEQEREEQLAKA 121
Query: 264 XXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENSKRRMDF---LEKVDQGV 320
N L E +K +E ++E G ++L+ + E+ K LE V + +
Sbjct: 122 MEKLNSEQNILDEVTKKLEQSEEEVLAARGAIQELTEKLEESEKETSTAKTELEAVSKKL 181
Query: 321 QVQGKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPAYEPPHDKIEKLGSQILEL 380
+ I + Q + E +E + Q+L
Sbjct: 182 D-SSETSLKEFSDMIEAMKIQLINCEKQKDEAVELLKQKLEEVEKNMSDVE-VQKQLLLE 239
Query: 381 GVQANQKRLQKSEKEKILNQNKLTLRQCSDRLK-DMEDKNNKLLHALRNSGAENIFEAYC 439
+ K Q +E +I+ + + + LK D E++ N L AL + + I E
Sbjct: 240 STTSEMK--QHAEAAEIVKKQLEEAQSSIENLKKDAENERN-LKTALESDESSAISEITK 296
Query: 440 WLQQHRHELN-KEAYGPVLLE-VNVSNRAHANYLEDHVGHYIWKSFITQDAGDRDFLAKN 497
++ + EL E L E ++ + H ED + K++ + A +AK+
Sbjct: 297 QMEAAKKELEASEKEKSELREQMDRLQKVHNAGQEDI--QKLQKTWELEMAK----IAKS 350
Query: 498 LKPFDVPILNYVSNESSRKEPFQISEEMRALGISARLDQVFDAPHAVKEVLISQFGLDSS 557
+ + + KE ++ EE + GI + DA VK VL Q S
Sbjct: 351 TEDEKLAREQLAGELENAKEDLKVVEEEKHTGIQRAQGALDDAEKEVK-VLKEQLERAQS 409
Query: 558 YIGSKE---TDQKADNVAKL 574
+ S + + QKAD + +L
Sbjct: 410 ALESSQELASSQKADKIQEL 429
>UNIPROTKB|G8JLG1 [details] [associations]
symbol:SMC1A "Structural maintenance of chromosomes protein
1A" species:9606 "Homo sapiens" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0051276
"chromosome organization" evidence=IEA] InterPro:IPR010935
Pfam:PF06470 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0005694 GO:GO:0051276 SUPFAM:SSF75553
EMBL:Z97054 EMBL:AL161779 HGNC:HGNC:11111 ChiTaRS:SMC1A
ProteinModelPortal:G8JLG1 SMR:G8JLG1 Ensembl:ENST00000375340
Bgee:G8JLG1 Uniprot:G8JLG1
Length = 516
Score = 154 (59.3 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 66/242 (27%), Positives = 109/242 (45%)
Query: 26 IELHNFMTFD-HLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI---- 80
IE+ NF ++ I P R +IGPNGSGKS+L+ AI+ LG T L R ++
Sbjct: 7 IEIENFKSYKGRQIIGPFQRFTAIIGPNGSGKSNLMDAISFVLGEKTSNL-RVKTLRDLI 65
Query: 81 -GAYV-KRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKR 138
GA V K ++ + + E+ T R I SE+ N KVV E E ++
Sbjct: 66 HGAPVGKPAANRAFVSMVYSEEGAEDR-TFARVI-VGGSSEYKINNKVVQLHEYSEELEK 123
Query: 139 FNIQV---NNLT-QFLPQDRVCEFAKLSPVKLLEETEKAVGDPQ-----LPVQHCALVEK 189
I + N L Q R+ E A L +E EK D + L ++ VE
Sbjct: 124 LGILIKARNFLVFQVKKYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVET 183
Query: 190 SSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQ-RAELLEKVESMKKKLPWLKYDM 248
+K+K ++ N + +L+ ++ +E ++ EL E+VE K+++ + ++
Sbjct: 184 EAKIKQKLREIEENQKRIEKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEINKEL 243
Query: 249 KK 250
+
Sbjct: 244 NQ 245
Score = 40 (19.1 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 18/70 (25%), Positives = 32/70 (45%)
Query: 489 GDRDFLAKNLKPFDVPILNYVSNESSRKEPFQISEEMRALGISARLDQVFDAPHAVKEVL 548
G D AK + +D ++ + + R ++ E+M+A A L QV H ++ L
Sbjct: 421 GASDLKAK-ARRWDEKAVDKLKEKKERLTE-ELKEQMKAKRKEAELRQVQSQAHGLQMRL 478
Query: 549 -ISQFGLDSS 557
SQ L+ +
Sbjct: 479 KYSQSDLEQT 488
>RGD|1310167 [details] [associations]
symbol:Eea1 "early endosome antigen 1" species:10116 "Rattus
norvegicus" [GO:0005545 "1-phosphatidylinositol binding"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005768
"endosome" evidence=ISO] [GO:0005769 "early endosome"
evidence=IEA;ISO] [GO:0005829 "cytosol" evidence=IEA;ISO]
[GO:0005886 "plasma membrane" evidence=ISO] [GO:0005969
"serine-pyruvate aminotransferase complex" evidence=IEA;ISO]
[GO:0006897 "endocytosis" evidence=IEA;ISO] [GO:0006906 "vesicle
fusion" evidence=IEA;ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0019897 "extrinsic to plasma membrane"
evidence=IEA;ISO] [GO:0030742 "GTP-dependent protein binding"
evidence=IEA;ISO] [GO:0042803 "protein homodimerization activity"
evidence=IEA;ISO] [GO:0055037 "recycling endosome" evidence=IDA]
InterPro:IPR000306 InterPro:IPR007087 InterPro:IPR015880
Pfam:PF01363 PROSITE:PS00028 PROSITE:PS50157 SMART:SM00064
SMART:SM00355 RGD:1310167 GO:GO:0005829 GO:GO:0046872 GO:GO:0005545
GO:GO:0008270 GO:GO:0006897 GO:GO:0019897 GO:GO:0055037
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178 GO:GO:0005769
GO:GO:0006906 OMA:LKEQCKT GO:GO:0005969
GeneTree:ENSGT00700000104373 IPI:IPI00768104 PRIDE:F1LUA1
Ensembl:ENSRNOT00000029764 ArrayExpress:F1LUA1 Uniprot:F1LUA1
Length = 1411
Score = 127 (49.8 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 74/310 (23%), Positives = 139/310 (44%)
Query: 650 IEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQA 709
++ + KE+ E+ +EK + + I L K E + ++ + + +Q
Sbjct: 901 LQQQTESALKEQSELKK--SLEKERETSQQLMIELNSVKGEVTQAQNTLKQKEKE--EQQ 956
Query: 710 ADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQH---EKLAL 766
NI Q K A E K +E + + A +E +K+++ Q EK L
Sbjct: 957 LQGNINQLKQATEQKKKQMEALQGELKNVTSQKAQLE--SKLQQQAAQAAQELAVEKGKL 1014
Query: 767 QA-SLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNI 825
A Y+ C+ +++ + L +++E +A T + ++ E+L A +D I
Sbjct: 1015 SALQSTYDKCQADLQQLQSDLYG--KESELLA--TRQ------DLKCVEEKLALAQEDLI 1064
Query: 826 SQANSIFFLNQNILQEYEHRQRQIE-DLSTKQEADKKELKRFL-AEID-ALKEKWLPTLR 882
S N I N++I QE + + +E DL+ K+E K++ K A+ + ++KEK L T +
Sbjct: 1065 SNRNQIGNQNKSI-QELQAAKAALEQDLAKKEEVLKEQSKALQDAQREKSVKEKELVTEK 1123
Query: 883 NLVAQINETFSRNFQEMAVAGEVSLDEHESDF--------DKFGILIKVKFRQSGQLEVL 934
+ +A++ E R +E+A E L H+ + D +LI+ K G+++ L
Sbjct: 1124 SKLAEMEEIKCRQEKEIAKLKE-ELKSHKQESIKEVTNLKDAKQLLIQQKLELQGKVDSL 1182
Query: 935 SAHHQSGGER 944
A + ER
Sbjct: 1183 KAALEQEKER 1192
Score = 120 (47.3 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 53/251 (21%), Positives = 108/251 (43%)
Query: 643 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMEN-HINLRKRKLESIEKEDDINTA 701
+Q QR + +L E+ ++ + +I+ R+ +E+ L+ K ESI++ ++ A
Sbjct: 1105 LQDAQREKSVKEKELVTEKSKLAEMEEIKCRQEKEIAKLKEELKSHKQESIKEVTNLKDA 1164
Query: 702 LAKLVDQAADLN--IQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLK 759
L+ Q +L + K A+E + +++ + E+ EF K +L +K
Sbjct: 1165 KQLLIQQKLELQGKVDSLKAALEQEKERQQLMR-EQMRKEEEKRKEEFSEKEAKLHSEIK 1223
Query: 760 QHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEA 819
+ E + + +V ++L K++ +S ELEK+ ++ I LEA
Sbjct: 1224 EKEAGVKKHEENEAKLTMQVTTLNENLGTVKKEWQSSQRRVSELEKQTDDLRGEIAVLEA 1283
Query: 820 AIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLP 879
+Q+N + ++ E E Q ++ +L K + ++ E +L+ K
Sbjct: 1284 TVQNNQDERRALLERCLKGEGEIEKLQTKVLELQRKLDNTTAAVQELGRENQSLQIKHTQ 1343
Query: 880 TLRNLVAQINE 890
L A+ NE
Sbjct: 1344 ALNRKWAEDNE 1354
Score = 78 (32.5 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 83/419 (19%), Positives = 152/419 (36%)
Query: 124 GKVVPKGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQH 183
G++ KGE + K +V Q L +V EF +L + +E ++ H
Sbjct: 365 GELREKGEAAQKLKEELREVETKHQHL---KV-EFKQLQQQREEKEQHGLQLQGEVSQLH 420
Query: 184 CALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQE-KDVERVRQRAE--LLEKVESMKKK 240
L+E +L +K L+ K ++ EQ+ D++ R E L EKV + +
Sbjct: 421 SKLLETERQLGEAHGRLKEQRQ-LSSEKLMDKEQQVADLQLKLSRLEEQLKEKVTNSTEL 479
Query: 241 LPWLKYDMKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSS 300
L + K ++ N L + + I K Q+ L+ +K
Sbjct: 480 QHQL--EKSKQQHQEQQALQQSTTAKLREAQNDLEQVLRQIGDKDQKIQNLEALLQKSKE 537
Query: 301 LINENSKRRMDFLEKVDQGVQVQGKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTV 360
I+ K R D K+ G +G+ + + +
Sbjct: 538 NISLLEKEREDLYAKIQAG---EGETAVLNQLQEKNHALQQQLTQLMEKLKNQSESHKQ- 593
Query: 361 PAYEPPHDKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDK-- 418
A E HD++++ + + + SE LN++K + Q ++K +
Sbjct: 594 -AEENLHDQVQEQKAHLRAAQDRVLSLETSVSELSSQLNESKEKVSQLDIQIKAKTELLL 652
Query: 419 NNKLLHALRNSGAENIFE-AYCWLQQHRHELNK-EAYGPVLLEVNVSNRAHANYLEDHVG 476
+ + + + +N + A LQ + ELNK A + + H LE H+
Sbjct: 653 SAEAAKTAQRADLQNHLDTAQNALQDKQQELNKVSAQLDQVTAKFQEKQEHCTQLESHLK 712
Query: 477 HYIWKSF-ITQDAGDRDFLAKNLKPFDVPILNYVSNESSRKEPFQISEEMRALGISARL 534
Y K + Q A D + K L+ N + ++SR++ Q ++ R L L
Sbjct: 713 DYKEKHLSLEQKAEDLEGQIKKLEA------NNLEVKASREQAVQSLQQQRQLSTDLEL 765
Score = 65 (27.9 bits), Expect = 0.00072, Sum P(3) = 0.00072
Identities = 45/211 (21%), Positives = 85/211 (40%)
Query: 100 DTKEEHLTIMRKIDTRNKSEWFFNGKVVP-KGEVLEITKRFNIQVNNLTQFLPQDRVCEF 158
D KE+HL++ +K + G++ + LE+ V +L Q E
Sbjct: 713 DYKEKHLSLEQKAED-------LEGQIKKLEANNLEVKASREQAVQSLQQQRQLSTDLEL 765
Query: 159 AKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQE 218
K L+E ++ V +L +Q+ KS L+ I+ T+ + + LK +
Sbjct: 766 RNAELRKQLQEQKEVVSHTKLDLQN-----KSEALENIKQTLTKKEEEKVVLKQEFEKLS 820
Query: 219 KDVERVRQRAELLEKVESMKKKLPWLKYDMKKAEYIXXXXXXXXXXXXXXXXXNTLHEFS 278
+D E Q EL +++++ +L + K A + EF
Sbjct: 821 QDSEA--QHKELSDRMQAAITEL-MVMTAQKDALLAELSTTKGKLSKVSDSLQTSRSEFE 877
Query: 279 KPIEGKKQEKAILDGD--CKKLSSLINENSK 307
K E +K + A+LD + CK+L + + ++
Sbjct: 878 K--ESQKGKAAVLDLEKACKELKHQLQQQTE 906
Score = 64 (27.6 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 56/308 (18%), Positives = 114/308 (37%)
Query: 131 EVLEITKRFNIQVNNL--TQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVE 188
E + +R ++Q N+L Q QD+ E K+S +L + T K Q +HC +E
Sbjct: 655 EAAKTAQRADLQ-NHLDTAQNALQDKQQELNKVS-AQLDQVTAKF----QEKQEHCTQLE 708
Query: 189 KSSK-LKTIECTVKRNGDTLN-QLKALNVEQEKDVERVRQRA-ELLEKVESMKKKLPWLK 245
K K ++++ + L Q+K L +V+ R++A + L++ + L
Sbjct: 709 SHLKDYKEKHLSLEQKAEDLEGQIKKLEANN-LEVKASREQAVQSLQQQRQLSTDLELRN 767
Query: 246 YDMKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINEN 305
+++K + L + + K++EK +L + +KLS
Sbjct: 768 AELRK-QLQEQKEVVSHTKLDLQNKSEALENIKQTLTKKEEEKVVLKQEFEKLSQDSEAQ 826
Query: 306 SKRRMDFLEKVDQGVQVQGKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPAYEP 365
K D ++ + V K + ++
Sbjct: 827 HKELSDRMQAAITELMVMTAQKDALLAELSTTKGKLSKVSDSLQTSRSEFEKESQKGKAA 886
Query: 366 PHDKIEKLGSQIL-ELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLH 424
D +EK ++ +L Q ++SE +K L + + T +Q L ++ + + +
Sbjct: 887 VLD-LEKACKELKHQLQQQTESALKEQSELKKSLEKERETSQQLMIELNSVKGEVTQAQN 945
Query: 425 ALRNSGAE 432
L+ E
Sbjct: 946 TLKQKEKE 953
Score = 53 (23.7 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 41/192 (21%), Positives = 81/192 (42%)
Query: 284 KKQEKAILDGDCKKLSSLINENSKRRMDFLE-KVDQGVQVQGKYKXXXXXXXXXXXXXXX 342
+++E L +CKKL S + NS+ ++ L ++ +G Q Y
Sbjct: 244 RERESEKLKDECKKLQSE-HANSEATINQLRSELAKGPQEVAVYVQEIQKLKGSVNELTQ 302
Query: 343 ILKARXXXXXXXXXXQTVPAYEPPHDKIEKLGSQILELGVQANQKRLQKSEKEKILNQNK 402
K++ E H++ E L + + + +Q+ L + + L ++
Sbjct: 303 --KSQTLMEKLQKKDLDYTHLEEKHNE-EALSRKNTQAAL--HQRDLDCQQLQARLTASE 357
Query: 403 LTLRQCSDRLKDMEDKNNKLLHALRN--SGAENIFEAYCWLQQHRHELNKEAYGPVLLEV 460
+L++ L++ + KL LR + +++ + LQQ R E KE +G + L+
Sbjct: 358 GSLQRIQGELREKGEAAQKLKEELREVETKHQHLKVEFKQLQQQREE--KEQHG-LQLQG 414
Query: 461 NVSNRAHANYLE 472
VS + H+ LE
Sbjct: 415 EVS-QLHSKLLE 425
Score = 42 (19.8 bits), Expect = 0.00072, Sum P(3) = 0.00072
Identities = 9/36 (25%), Positives = 21/36 (58%)
Query: 382 VQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMED 417
++ K LQ +++EK + + +L + +L +ME+
Sbjct: 1098 LKEQSKALQDAQREKSVKEKELVTEK--SKLAEMEE 1131
Score = 41 (19.5 bits), Expect = 0.00090, Sum P(3) = 0.00090
Identities = 13/41 (31%), Positives = 21/41 (51%)
Query: 383 QANQKRLQKSEKEKILNQNKLTLRQCSD-RLKDMEDKNNKL 422
QA QK ++E+ L N L+Q ++ + K ME +L
Sbjct: 942 QAQNTLKQKEKEEQQLQGNINQLKQATEQKKKQMEALQGEL 982
>MGI|MGI:1922974 [details] [associations]
symbol:Ccdc18 "coiled-coil domain containing 18"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] MGI:MGI:1922974
HSSP:P01096 GeneTree:ENSGT00700000104188 EMBL:AK040158
EMBL:AK040607 EMBL:AK006197 EMBL:BC082598 IPI:IPI00377612
IPI:IPI00406830 IPI:IPI00844610 IPI:IPI00844715 RefSeq:NP_082757.1
UniGene:Mm.441231 ProteinModelPortal:Q640L5 PhosphoSite:Q640L5
PRIDE:Q640L5 Ensembl:ENSMUST00000047677 GeneID:73254 KEGG:mmu:73254
UCSC:uc008ynr.1 UCSC:uc008yns.1 CTD:343099 eggNOG:NOG122048
HOGENOM:HOG000111405 HOVERGEN:HBG095601 InParanoid:Q640L5
OMA:RECKMEI OrthoDB:EOG42BX82 NextBio:337772 Bgee:Q640L5
CleanEx:MM_CCDC18 Genevestigator:Q640L5 Uniprot:Q640L5
Length = 1455
Score = 137 (53.3 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 79/375 (21%), Positives = 165/375 (44%)
Query: 653 EAAKLQKERE-EIINIVQIEKRKRREMEN-HINLRKRKLESIEKEDDINTALAKLVDQAA 710
E +LQ E E+ +Q + E++N H L+ + E D + A L ++
Sbjct: 925 ELERLQHHTETELTETMQKREALENELQNAHGELKSTLRQLQELRDVLQKAQLSLEEKYT 984
Query: 711 ---DLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHE----- 762
DL + + +EI++ E++ + E++ + A++ L+ +++H
Sbjct: 985 TIKDLTAELRECKMEIEDKKQELIEMDQALKERNWELKQRAAQVTHLDMTIREHRGEMEQ 1044
Query: 763 ---KL--ALQAS-LHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIE- 815
KL L+ S L ++C K+VE + L +AK Q FI + E+E ++ IE
Sbjct: 1045 KIIKLEGTLEKSELELKECNKQVESLNEKLQNAKEQLREKEFIMLQNEQEISQLKKEIER 1104
Query: 816 ------ELEAAI---QDNIS-QANSIFFLNQNILQEYEHRQRQIEDL--STKQEAD-KKE 862
E+E+ I +D I+ Q + L Q + E Q +L + +QE ++E
Sbjct: 1105 TQQRMKEMESVIKEQEDYIATQYKEVIDLGQELRLTQEQMQNTHSELVEARRQEVQAQRE 1164
Query: 863 LKRFLAEIDALKE--KWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGIL 920
++R E++ +K+ K N +A+ E + +E + + +++ K
Sbjct: 1165 IERLAGELEDIKQLSKEKEAHGNRLAE--ELGASQVREAHLEARM-----QAEIKKLSSE 1217
Query: 921 IKVKFRQSGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPI-NER 979
+ +++ Q+E++S H ++ + +S S+Q L + E+ + D + N
Sbjct: 1218 VD-SLKEAYQIEMIS-HQENHAKWKLSAESQKTSVQQLNEQLEKAKQELEEAQDTVSNLH 1275
Query: 980 KMFQ---QLVRAASQ 991
+ Q +++ AA++
Sbjct: 1276 QQVQDRNEVIEAANE 1290
Score = 68 (29.0 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 62/299 (20%), Positives = 113/299 (37%)
Query: 133 LEITKRFNIQVNNL-TQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSS 191
LE K Q+ L TQ +D+ +F K E+T + L QH +E
Sbjct: 642 LEQHKEMEKQIEQLETQLEKRDQ--QF------KEQEKTMSILQQDILCKQHH--LESLD 691
Query: 192 KLKTIECTVKRNGDTLNQ---LKALNVEQEKDVERVRQRAELLEKV-ESMKKKLPWLKYD 247
+L T E V+ + + + LKAL + ++ +VRQ LE E + L L+ +
Sbjct: 692 RLLT-ESKVEMEKENMKKDEALKALQIHVSEETIKVRQLDSALEICKEELALHLNQLERN 750
Query: 248 MKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGK-------KQEKAILDGDCKKLSS 300
+K E T H + E +Q++ +L + +
Sbjct: 751 KEKFERQLKKKSEEVYCLQKELKIKT-HNLEETSEQNAILQHTLQQQQQMLQQETMRNGE 809
Query: 301 LINENSKRRMDFLEKVDQGVQVQGKY---KXXXXXXXXXXXXXXXILKARXXXXXXXXXX 357
L + SK + K +Q +Q Q + K LK +
Sbjct: 810 LEDTQSKLEKQ-VSKQEQELQKQRESSTEKLRKMEEKYETAIREVDLKRQKIIELTGTAR 868
Query: 358 QTVPAYEPPHDKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDME 416
Q + +++ K+ +I+ L K +Q S+ + +L+Q K L + ++ +K++E
Sbjct: 869 QAKLEMDQYKEELSKMEKEIIHLKRDGENKSMQLSQLDMVLDQTKTELEKTTNSVKELE 927
Score = 66 (28.3 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 26/115 (22%), Positives = 56/115 (48%)
Query: 131 EVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKS 190
E+LE + N +T+ Q + E K K++ + A + +L + L+EK+
Sbjct: 559 ELLEKASNASKLENEMTKKCSQLLILE--KQLEEKIIAYSSIAAKNAELEQE---LMEKN 613
Query: 191 SKLKTIECTVKRNGDTL----NQLKALNVEQEKDVER-VRQRAELLEKVESMKKK 240
K++++E + + + + K +++EQ K++E+ + Q LEK + K+
Sbjct: 614 EKIRSLESNINTEHEKICFAFEKAKKIHLEQHKEMEKQIEQLETQLEKRDQQFKE 668
Score = 62 (26.9 bits), Expect = 7.9e-06, Sum P(2) = 7.9e-06
Identities = 34/156 (21%), Positives = 70/156 (44%)
Query: 102 KEEHLTIMRKIDTRNKSEWFFNGKVVPKGE-VLEITKRFNIQVNNLTQFLPQDRVCEFAK 160
KEE + +++ RNK + F ++ K E V + K I+ +NL + Q+ + +
Sbjct: 737 KEELALHLNQLE-RNKEK--FERQLKKKSEEVYCLQKELKIKTHNLEETSEQNAILQHTL 793
Query: 161 LSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQE-- 218
++L++ G+ + Q + +EK + E +R T +L+ + + E
Sbjct: 794 QQQQQMLQQETMRNGELE-DTQ--SKLEKQVSKQEQELQKQRESST-EKLRKMEEKYETA 849
Query: 219 -KDVERVRQRA-ELLEKVESMKKKLPWLKYDMKKAE 252
++V+ RQ+ EL K ++ K ++ K E
Sbjct: 850 IREVDLKRQKIIELTGTARQAKLEMDQYKEELSKME 885
Score = 46 (21.3 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 12/81 (14%), Positives = 40/81 (49%)
Query: 164 VKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVER 223
+ +LE ++ + +P+ ++ +++ + ++ D L Q + + +E+E ++
Sbjct: 158 IAMLESAQEQAAN--IPILEEQIINLEAEVSAQDKVLREAEDKLEQSQKMVIEKEHSLQE 215
Query: 224 VRQ-----RAELLEKVESMKK 239
++ + +LLE+ + K+
Sbjct: 216 AKEECIKLKVDLLEQSKQGKR 236
Score = 46 (21.3 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 28/144 (19%), Positives = 60/144 (41%)
Query: 188 EKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESM-------KKK 240
+K S+ + +V + + N + L+ ++++ V Q L+ K+ES+ K K
Sbjct: 98 QKKSRDQVSFSSVSMDQEVKNLREKLHKLRQQNACLVTQNHSLMTKIESVHFELTQSKAK 157
Query: 241 LPWLKYDMKKAEYIXXXXXXXXXXXXXXXXXN-TLHEFSKPIEGKKQEKAILDGDCKKLS 299
+ L+ ++A I + L E +E + +K +++ + L
Sbjct: 158 IAMLESAQEQAANIPILEEQIINLEAEVSAQDKVLREAEDKLE--QSQKMVIEKE-HSLQ 214
Query: 300 SLINENSKRRMDFLEKVDQGVQVQ 323
E K ++D LE+ QG + +
Sbjct: 215 EAKEECIKLKVDLLEQSKQGKRAE 238
Score = 42 (19.8 bits), Expect = 0.00087, Sum P(2) = 0.00087
Identities = 17/75 (22%), Positives = 36/75 (48%)
Query: 160 KLSPVKLLEET--EKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQ 217
+ S +L++E EKA +L + + +K S+L +E ++ + + A N E
Sbjct: 549 RTSQFQLIQEELLEKASNASKLENE---MTKKCSQLLILEKQLEEKIIAYSSIAAKNAEL 605
Query: 218 EKDVERVRQRAELLE 232
E+++ ++ LE
Sbjct: 606 EQELMEKNEKIRSLE 620
>UNIPROTKB|J9P1C1 [details] [associations]
symbol:KIF20B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005874 "microtubule" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0007018
"microtubule-based movement" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=IEA] [GO:0003777 "microtubule motor
activity" evidence=IEA] InterPro:IPR001752 InterPro:IPR019821
Pfam:PF00225 PRINTS:PR00380 PROSITE:PS00411 PROSITE:PS50067
SMART:SM00129 GO:GO:0005524 GO:GO:0005875 GO:GO:0005874
GO:GO:0003777 GO:GO:0007018 Gene3D:3.40.850.10
GeneTree:ENSGT00530000063172 EMBL:AAEX03015394
Ensembl:ENSCAFT00000048651 Uniprot:J9P1C1
Length = 1740
Score = 143 (55.4 bits), Expect = 2.0e-06, Sum P(3) = 2.0e-06
Identities = 65/272 (23%), Positives = 126/272 (46%)
Query: 651 EDEAAKLQKEREEIINIVQIEKRKRREMEN-HINLRKRKLESIEKEDDINTALAKLVDQA 709
+DE + K +EI+ I + R +++ NL+ +SI+ D++ KL ++
Sbjct: 1093 KDECSHSAKLEQEILEKESIILKLERNLKDFQANLQ----DSIKNTKDLSEREVKLKEEI 1148
Query: 710 ADL--NIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFD-AKIRELEFNLKQHEKLAL 766
+ L N+Q K+++++K E W AEK + A I+ L+ +L++ E+
Sbjct: 1149 SQLTSNLQDAKHSLKLKE---EEKETSWHTAEKLKEELSASSALIQNLKADLQRKEEDYA 1205
Query: 767 QASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNIS 826
+ D KK++E +K +S + + + + ELEK+ + I+ + IQ
Sbjct: 1206 ELKEKLADAKKQIEQVQKEVSVMRDEEKLLRIKVHELEKKKNQCSQEIDIKQRTIQQLKE 1265
Query: 827 QANSIFFLNQNI---LQEYEH-------RQRQIEDLST---KQEADKKELKRFLA----E 869
Q + NQN+ +Q+YE +++ IED+ +QE + E R L E
Sbjct: 1266 QLS-----NQNVEEAIQQYERVCKDLNVKEKIIEDMRMTLEEQEETQAEQDRVLEAKLEE 1320
Query: 870 IDALK---EKWLPTLRNLVAQINETFSRNFQE 898
+ L EKW ++L A+ N+ ++ ++
Sbjct: 1321 AEGLATELEKWKEKCKDLEAKSNQRSNKELED 1352
Score = 58 (25.5 bits), Expect = 2.0e-06, Sum P(3) = 2.0e-06
Identities = 24/86 (27%), Positives = 41/86 (47%)
Query: 367 HDKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSD---RLKDMEDKNNKLL 423
H IE + + E+ +++K Q E E+ + + + L+ C D RLK +E++ NK
Sbjct: 971 HSSIEAIWEECKEIVKGSSKKSHQIQELEQQIEKLQAELKGCMDENNRLK-IEERENKNK 1029
Query: 424 HALRNSGAENIFEAYCWLQQHRHELN 449
L EN+ + L+Q E N
Sbjct: 1030 GDLLKE-KENLIQQ---LKQELQEKN 1051
Score = 54 (24.1 bits), Expect = 2.0e-06, Sum P(3) = 2.0e-06
Identities = 11/40 (27%), Positives = 24/40 (60%)
Query: 202 RNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKL 241
+NG+ ++ +E++K ++ +LL+ +E +KKKL
Sbjct: 547 QNGELTDEDLDKTLEEDKAFISYEEKRKLLDLIEDLKKKL 586
Score = 52 (23.4 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 17/83 (20%), Positives = 43/83 (51%)
Query: 167 LEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQ 226
++E E+ + Q ++ C ++++++LK E K GD L + + L + +++++
Sbjct: 995 IQELEQQIEKLQAELKGC--MDENNRLKIEERENKNKGDLLKEKENLIQQLKQELQEKNT 1052
Query: 227 RAEL-LEKVESMKKKLPWLKYDM 248
++ ++ V K+ L L D+
Sbjct: 1053 SLDVQVQHVVEGKRALSELTQDI 1075
Score = 46 (21.3 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 16/75 (21%), Positives = 34/75 (45%)
Query: 366 PHDKIEKLGSQILELGVQANQKRLQKSEKEKILNQ--NKLTLRQCSDRLKDMEDKNNKLL 423
P+ + E++ S+ L Q + +Q E + N L + + + +KD E + +
Sbjct: 206 PYQEKEEVASKSALLR-QIKEVVMQNDSYESLYGSLTNSLNIPESEESMKDCEQASLNMN 264
Query: 424 HALRNSGAENIFEAY 438
+ ++ S + FE Y
Sbjct: 265 NNIKFSVWVSFFEIY 279
Score = 44 (20.5 bits), Expect = 4.9e-05, Sum P(3) = 4.9e-05
Identities = 20/76 (26%), Positives = 31/76 (40%)
Query: 358 QTVPAYEPPHDKIE-KLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDME 416
Q P E K+E K LE+ + L K+++E + Q +L RQ + E
Sbjct: 651 QEEPVNEDCAVKVETKEAIACLEIKFNQVKAELAKTKEELVKTQEELKKRQ-----NESE 705
Query: 417 DKNNKLLHALRNSGAE 432
N L+ L S +
Sbjct: 706 INLNSLIQELEKSNKD 721
Score = 43 (20.2 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 13/42 (30%), Positives = 23/42 (54%)
Query: 398 LNQNKLTLRQCSDRLKDMEDKNNKLLHA-LRNSGAENIFEAY 438
+N + LTL +C + LK+ E K+ H R S + F+++
Sbjct: 403 INTSLLTLGKCINVLKNSE-KSKFQQHVPFRESKLTHYFQSF 443
>UNIPROTKB|E1BRE5 [details] [associations]
symbol:EEA1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005545
"1-phosphatidylinositol binding" evidence=IEA] [GO:0005769 "early
endosome" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005969 "serine-pyruvate aminotransferase complex"
evidence=IEA] [GO:0006897 "endocytosis" evidence=IEA] [GO:0006906
"vesicle fusion" evidence=IEA] [GO:0019897 "extrinsic to plasma
membrane" evidence=IEA] [GO:0030742 "GTP-dependent protein binding"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] InterPro:IPR000306 InterPro:IPR015880 Pfam:PF01363
SMART:SM00064 SMART:SM00355 GO:GO:0005829 GO:GO:0046872
GO:GO:0005545 GO:GO:0008270 GO:GO:0006897 GO:GO:0019897
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178 GO:GO:0005769
GO:GO:0006906 GO:GO:0005969 GeneTree:ENSGT00700000104373
EMBL:AADN02005915 EMBL:AADN02005916 IPI:IPI00571138
Ensembl:ENSGALT00000018404 OMA:NEVLADQ Uniprot:E1BRE5
Length = 1411
Score = 152 (58.6 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 63/269 (23%), Positives = 126/269 (46%)
Query: 659 KEREEIINIVQIEKRKRR-EMENHINLRKRKLESIEKEDDINTALAKLVDQAADLNIQQF 717
K + E++ + K +R +++NH++ + L+ +K+ ++N +L A LN +Q
Sbjct: 645 KAKTELLLSAEASKAAQRADLQNHLDTAQHALQ--DKQQELNKVSVQLDQVTAKLNDKQ- 701
Query: 718 KYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYEDCKK 777
+Y +++ L + Y E+H+ + K ELE LK+ E L A E +
Sbjct: 702 EYCAQLEANLKD-------YKEQHLY---LEQKTEELEGQLKKLEADVLDAKASKEQALQ 751
Query: 778 EVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTT-------IEELEAAIQDNISQANS 830
E++ R+ ++ + IA ++ +LE E M + E LE A Q Q
Sbjct: 752 ELQQQRQQSTELDLR---IAELSKQLEAEREAMSSAKSDLQKKSEALEQAKQQISKQEEE 808
Query: 831 IFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLVAQINE 890
L +N+ + + +Q++DL K +A EL++ E D L K L + + +++ +E
Sbjct: 809 NASLKKNLEKSSQDTSKQLKDLDCKMQAATSELQQVKLEKDTLL-KDLTSTKEKLSKSSE 867
Query: 891 TFSRNFQEMAVA---GEVSLDEHESDFDK 916
+F + +E+ G+ ++ E E + +
Sbjct: 868 SFKKRKEELEKEIEKGKAAVAEMEKSYQE 896
Score = 119 (46.9 bits), Expect = 8.6e-05, Sum P(2) = 8.6e-05
Identities = 71/305 (23%), Positives = 134/305 (43%)
Query: 655 AKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVD--QAADL 712
A+++K +E+ +Q++ + N + S+EK++ I+ L+ +D +A L
Sbjct: 888 AEMEKSYQEVKQQLQVQTESVAKERNELK------NSLEKKEGISKQLSIELDSTRAQVL 941
Query: 713 NIQQFKYAIEI--KNLLVEIVSCKWSYAEK--HMASIEFDAKIRELEFNLKQHEKLALQA 768
IQ E ++L ++ K S+ +K H +++ + K LE + KL Q
Sbjct: 942 EIQGLLKEKENSEQHLQGKLREMKESFEQKKKHSETLQTELKTALLE-KAELENKLQQQT 1000
Query: 769 SLHYEDCKKE---VEHCRKHLSDAKRQAESIAFITPELEKEFL----EMPTTIEELEAAI 821
L ++ K E + +K K E + E E L ++ +T E+L A
Sbjct: 1001 ILSAQELKAEKGKLADLQKTHEKNKENMEKLQLDLYGKESELLATRQDLKSTEEKLALAQ 1060
Query: 822 QDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEID---ALKEKWL 878
++ +S N I NQ I QE + + +E ++K+E E + L ++ LKEK L
Sbjct: 1061 EELVSSRNRIASSNQQI-QELKKAKSTLEQDASKKEQQLGEKAKMLQDLQNERILKEKDL 1119
Query: 879 PTLRNLVAQINETFSRNFQEMAVAGE---VSLDEHESDF----DKFGILIKVKFRQSGQL 931
+ ++ E SR +E A E + E E + D +LI+ K G++
Sbjct: 1120 ANEKCKTTELQEIRSRLEKESAKLSEELRICKQEFEKEVANLKDAKQLLIQQKLELQGKI 1179
Query: 932 EVLSA 936
+ +++
Sbjct: 1180 DNMNS 1184
Score = 70 (29.7 bits), Expect = 8.6e-05, Sum P(2) = 8.6e-05
Identities = 68/313 (21%), Positives = 116/313 (37%)
Query: 178 QLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQE-KDVERVRQRAE--LLEKV 234
+L H L+E +L +K L+ K ++ EQ+ D++ RAE L EKV
Sbjct: 415 ELSQLHSKLLETERQLGEAHGRLKEQRQ-LSSEKLMDREQQVADLQLKLSRAEEQLKEKV 473
Query: 235 ESMKKKLPWLKYDMKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGD 294
+ + L D K ++ N L + + I K Q+ L+
Sbjct: 474 ANSTELQHQL--DKAKQQHQEQQTLQQNTTSKLREAQNDLEQVLRQIGDKDQKIQNLEAL 531
Query: 295 CKKLSSLINENSKRRMDFLEKVDQG---VQVQGKYKXXXXXXXXXXXXXXXILKARXXXX 351
+K I+ K R D K+ G V + + LK +
Sbjct: 532 LQKSKENISLLEKEREDLYAKIQAGEGETAVLNQLQEKNHALQIQVTQLTEKLKNQSESH 591
Query: 352 XXXXXX-----QTVPAY-EPPHDKIEKLGSQILELGVQANQKRLQKSEKE-KILNQNKLT 404
Q A+ D++ L + I EL Q N+ + + S+ + ++ + +L
Sbjct: 592 KQAQENLHEQVQEQKAHLRAAQDRVLSLEANITELSSQLNESKEKVSQLDVQVKAKTELL 651
Query: 405 LRQCSDRLKDMEDKNNKL---LHALRNSGAENIFEAYCWLQQHRHELN-KEAYGPVLLEV 460
L + + D N L HAL++ E + + L Q +LN K+ Y LE
Sbjct: 652 LSAEASKAAQRADLQNHLDTAQHALQDKQQE-LNKVSVQLDQVTAKLNDKQEYC-AQLEA 709
Query: 461 NVSNRAHAN-YLE 472
N+ + + YLE
Sbjct: 710 NLKDYKEQHLYLE 722
Score = 64 (27.6 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 71/379 (18%), Positives = 145/379 (38%)
Query: 167 LEETEKAVGDPQLPVQHC-ALVEKSSKLKTIECTVKRNGDTLNQLKA-------LNVEQE 218
LE+ + +GD +Q+ AL++KS + I K D +++A LN QE
Sbjct: 511 LEQVLRQIGDKDQKIQNLEALLQKSKE--NISLLEKEREDLYAKIQAGEGETAVLNQLQE 568
Query: 219 KDVERVRQRAELLEKVESMKKKLPWLKYDMKKAEYIXXXXXXXXXXXXXXXXXNTLHEFS 278
K+ Q +L EK+++ + + ++ + N + E S
Sbjct: 569 KNHALQIQVTQLTEKLKNQSESHKQAQENLHEQVQEQKAHLRAAQDRVLSLEAN-ITELS 627
Query: 279 KPIEGKKQEKAILDGDCKKLSSLI--NENSK--RRMDFLEKVDQGVQ-VQGKYKXXXXXX 333
+ K++ + LD K + L+ E SK +R D +D +Q K +
Sbjct: 628 SQLNESKEKVSQLDVQVKAKTELLLSAEASKAAQRADLQNHLDTAQHALQDKQQELNKVS 687
Query: 334 XXXXXXXXXILKARXXXXXXXXXXQTVPAYEPPH----DKIEKLGSQILELGVQANQKRL 389
K + Y+ H K E+L Q+ +L +
Sbjct: 688 VQLDQVTA---KLNDKQEYCAQLEANLKDYKEQHLYLEQKTEELEGQLKKLEADVLDAKA 744
Query: 390 QKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAENIFEAYCWLQQHRHELN 449
K + + L Q + + R+ ++ + A+ +S ++ + L+Q + +++
Sbjct: 745 SKEQALQELQQQRQQSTELDLRIAELSKQLEAEREAM-SSAKSDLQKKSEALEQAKQQIS 803
Query: 450 KEAYGPVLLEVNV--SNRAHANYLED-HVGHYIWKSFITQDAGDRDFLAKNLKPFDVPIL 506
K+ L+ N+ S++ + L+D S + Q ++D L K+L +
Sbjct: 804 KQEEENASLKKNLEKSSQDTSKQLKDLDCKMQAATSELQQVKLEKDTLLKDLTSTKEKLS 863
Query: 507 NYVSNESSRKEPFQISEEM 525
S+ES +K ++ +E+
Sbjct: 864 K--SSESFKKRKEELEKEI 880
Score = 52 (23.4 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 32/145 (22%), Positives = 66/145 (45%)
Query: 172 KAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELL 231
KA D ++ ++ A +K + L T E +R+ T+ LK + Q VE V + L
Sbjct: 176 KAKYDEEISLREGA-EQKMTNL-TQELLKERS--TIEDLKT-ELLQRPGVEDVAVLKKEL 230
Query: 232 EKVESMKKKLPWLKYDMKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAIL 291
+V+++ K+ L+ + +++E + T+++ + QE A+
Sbjct: 231 VQVQTLMDKMT-LERE-RESEKLKDECKHLQAEQANSEA--TINQLRAELAKGPQEVAVY 286
Query: 292 DGDCKKLSSLINENSKRRMDFLEKV 316
+ +KL SL+ E ++ + EK+
Sbjct: 287 VQEQQKLQSLVKELEQKNQNLTEKL 311
>UNIPROTKB|F1SM58 [details] [associations]
symbol:F1SM58 "Structural maintenance of chromosomes
protein" species:9823 "Sus scrofa" [GO:0005634 "nucleus"
evidence=IEA] [GO:0030893 "meiotic cohesin complex" evidence=IEA]
[GO:0030261 "chromosome condensation" evidence=IEA] [GO:0007062
"sister chromatid cohesion" evidence=IEA] [GO:0006310 "DNA
recombination" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
InterPro:IPR024704 PIRSF:PIRSF005719 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005634 GO:GO:0006281 GO:GO:0006310
GO:GO:0030261 GO:GO:0007062 GeneTree:ENSGT00580000081569
EMBL:CU856016 EMBL:CU633534 Ensembl:ENSSSCT00000000014
Uniprot:F1SM58
Length = 1233
Score = 111 (44.1 bits), Expect = 2.1e-06, Sum P(3) = 2.1e-06
Identities = 73/379 (19%), Positives = 170/379 (44%)
Query: 657 LQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAADLNIQQ 716
+QK RE+I N+ + E+ + ++ + ++++L+ + + N + K+ Q + +
Sbjct: 836 VQKGREDIDNLKKTEENCLKIVDE-LTEKRQRLKDVFVTQNSN--IEKVQAQTEEERKKF 892
Query: 717 FKYAIEIKNLLVEIVSCKWSYAEKHMA--SIEFDAKIRELEFNLKQHEKLALQASLHYED 774
E+ L E ++ + S +K + ++ D K++++E L +L+ + E
Sbjct: 893 LAVDREVGKLQKEALAIQTSLEQKRLEKHNMLLDCKVQDIEIILLSG---SLEDIIEVES 949
Query: 775 CKK---EVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEA----AIQDNISQ 827
+ E E + +D Q E+I + L +E L T +E+EA +Q SQ
Sbjct: 950 SVQLGAEAESTQA-TTDVYEQEEAIE-VDYSLLREDLRALQTDKEVEAHLKLLLQQVASQ 1007
Query: 828 ANSIFFL---NQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEK----WLPT 880
+ + N L+ + + ++++ + EA +KE + E + +K++ +
Sbjct: 1008 EDILLKTAAPNLRALENLKAVRDKLQESTDAFEASRKEARMCRQEFEQVKKRRYDLFSQC 1067
Query: 881 LRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVLSAHHQS 940
++ I++ + + + + +S + E + + GI G+ + + S
Sbjct: 1068 FEHVSVSIDQIYKKLCRNNSAQAFLSPENPEEPYLE-GISYNCV--APGK-RFMPMDNLS 1123
Query: 941 GGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTPQCFLL 1000
GGE+ V+ + L ++ PF V+DE++ +D N K+ ++ +Q Q ++
Sbjct: 1124 GGEKCVAALALLFAVHSFRPAPFFVLDEVDAALDNTNIGKV-SSYIKEQTQEQF-QMIII 1181
Query: 1001 TPKLLPDLEYSEACSILNI 1019
+ L + YS+A +++ I
Sbjct: 1182 S---LKEEFYSKADALIGI 1197
Score = 95 (38.5 bits), Expect = 2.1e-06, Sum P(3) = 2.1e-06
Identities = 64/301 (21%), Positives = 125/301 (41%)
Query: 21 GNIIEIELHNFMTF-DHLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATS 79
G++ + + NF ++ + P R +IGPNGSGKS+++ A++ +G L R +
Sbjct: 2 GHLELLLVENFKSWRGRQVIGPFRRFTCIIGPNGSGKSNVMDALSFVMGEKIANL-RVKN 60
Query: 80 I-----GAYV-KRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVL 133
I GA++ K S ++I ++ EE T R I SE+ F+ V + +
Sbjct: 61 IQELIHGAHIGKPVSSSASVRIVYVEESGEEK-TFTRII-RGGCSEFHFDDNPVSRSSYI 118
Query: 134 EITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKL 193
+ ++ I V + Q V + P + + E+ +L ++ EK +L
Sbjct: 119 KELEKIGIIVKARNCLVFQGTVESISLKKPKERTQFFEEISTSGELVREY---EEKKRRL 175
Query: 194 KTIECTVKRNGDTLNQLKALNVEQEKDVERVRQ---RAELLEKVESMKKKLPWLKYDMKK 250
+ E + N + + A + + E VR+ RA + +L L ++ +K
Sbjct: 176 QKAEEDAQFNFNKKKNIAAERKHAKLEKEEVRRHDSRAPRCTENRISLLQLFQLYHNERK 235
Query: 251 AEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAIL-------DGDCKKLSSLIN 303
++ + HE ++ KK+E +L + + K L +L+N
Sbjct: 236 IHFLNTELKRVNEDLSVTKESLSRHE--NIVKAKKKEHGMLSRQLQQTEKELKSLEALLN 293
Query: 304 E 304
+
Sbjct: 294 Q 294
Score = 45 (20.9 bits), Expect = 2.1e-06, Sum P(3) = 2.1e-06
Identities = 10/44 (22%), Positives = 24/44 (54%)
Query: 390 QKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAEN 433
+K ++EK L + + R+ ++ ++ N + L+N+G +N
Sbjct: 452 EKKQQEKTLVDE---IAKTKSRMSEVNEELNLIRSELQNAGIDN 492
Score = 44 (20.5 bits), Expect = 2.7e-06, Sum P(3) = 2.7e-06
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 291 LDGDCKKLSSLINENSKRRMDFLEKVDQ 318
++ C LS I + +R F EK+D+
Sbjct: 738 IESQCTMLSEGIRKRQQRIEGFQEKIDK 765
>UNIPROTKB|E2QUT0 [details] [associations]
symbol:KIF20B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005874 "microtubule" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0007018
"microtubule-based movement" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=IEA] [GO:0003777 "microtubule motor
activity" evidence=IEA] InterPro:IPR001752 InterPro:IPR019821
Pfam:PF00225 PRINTS:PR00380 PROSITE:PS00411 PROSITE:PS50067
SMART:SM00129 GO:GO:0005524 GO:GO:0005875 GO:GO:0005874
GO:GO:0003777 GO:GO:0007018 Gene3D:3.40.850.10
GeneTree:ENSGT00530000063172 OMA:KLGIKHQ EMBL:AAEX03015394
Ensembl:ENSCAFT00000011558 Uniprot:E2QUT0
Length = 1819
Score = 143 (55.4 bits), Expect = 2.3e-06, Sum P(3) = 2.3e-06
Identities = 65/272 (23%), Positives = 126/272 (46%)
Query: 651 EDEAAKLQKEREEIINIVQIEKRKRREMEN-HINLRKRKLESIEKEDDINTALAKLVDQA 709
+DE + K +EI+ I + R +++ NL+ +SI+ D++ KL ++
Sbjct: 1172 KDECSHSAKLEQEILEKESIILKLERNLKDFQANLQ----DSIKNTKDLSEREVKLKEEI 1227
Query: 710 ADL--NIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFD-AKIRELEFNLKQHEKLAL 766
+ L N+Q K+++++K E W AEK + A I+ L+ +L++ E+
Sbjct: 1228 SQLTSNLQDAKHSLKLKE---EEKETSWHTAEKLKEELSASSALIQNLKADLQRKEEDYA 1284
Query: 767 QASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNIS 826
+ D KK++E +K +S + + + + ELEK+ + I+ + IQ
Sbjct: 1285 ELKEKLADAKKQIEQVQKEVSVMRDEEKLLRIKVHELEKKKNQCSQEIDIKQRTIQQLKE 1344
Query: 827 QANSIFFLNQNI---LQEYEH-------RQRQIEDLST---KQEADKKELKRFLA----E 869
Q + NQN+ +Q+YE +++ IED+ +QE + E R L E
Sbjct: 1345 QLS-----NQNVEEAIQQYERVCKDLNVKEKIIEDMRMTLEEQEETQAEQDRVLEAKLEE 1399
Query: 870 IDALK---EKWLPTLRNLVAQINETFSRNFQE 898
+ L EKW ++L A+ N+ ++ ++
Sbjct: 1400 AEGLATELEKWKEKCKDLEAKSNQRSNKELED 1431
Score = 58 (25.5 bits), Expect = 2.3e-06, Sum P(3) = 2.3e-06
Identities = 24/86 (27%), Positives = 41/86 (47%)
Query: 367 HDKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSD---RLKDMEDKNNKLL 423
H IE + + E+ +++K Q E E+ + + + L+ C D RLK +E++ NK
Sbjct: 1050 HSSIEAIWEECKEIVKGSSKKSHQIQELEQQIEKLQAELKGCMDENNRLK-IEERENKNK 1108
Query: 424 HALRNSGAENIFEAYCWLQQHRHELN 449
L EN+ + L+Q E N
Sbjct: 1109 GDLLKE-KENLIQQ---LKQELQEKN 1130
Score = 54 (24.1 bits), Expect = 2.3e-06, Sum P(3) = 2.3e-06
Identities = 11/40 (27%), Positives = 24/40 (60%)
Query: 202 RNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKL 241
+NG+ ++ +E++K ++ +LL+ +E +KKKL
Sbjct: 547 QNGELTDEDLDKTLEEDKAFISYEEKRKLLDLIEDLKKKL 586
Score = 52 (23.4 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 17/83 (20%), Positives = 43/83 (51%)
Query: 167 LEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQ 226
++E E+ + Q ++ C ++++++LK E K GD L + + L + +++++
Sbjct: 1074 IQELEQQIEKLQAELKGC--MDENNRLKIEERENKNKGDLLKEKENLIQQLKQELQEKNT 1131
Query: 227 RAEL-LEKVESMKKKLPWLKYDM 248
++ ++ V K+ L L D+
Sbjct: 1132 SLDVQVQHVVEGKRALSELTQDI 1154
Score = 46 (21.3 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 16/75 (21%), Positives = 34/75 (45%)
Query: 366 PHDKIEKLGSQILELGVQANQKRLQKSEKEKILNQ--NKLTLRQCSDRLKDMEDKNNKLL 423
P+ + E++ S+ L Q + +Q E + N L + + + +KD E + +
Sbjct: 206 PYQEKEEVASKSALLR-QIKEVVMQNDSYESLYGSLTNSLNIPESEESMKDCEQASLNMN 264
Query: 424 HALRNSGAENIFEAY 438
+ ++ S + FE Y
Sbjct: 265 NNIKFSVWVSFFEIY 279
Score = 44 (20.5 bits), Expect = 2.3e-05, Sum P(3) = 2.3e-05
Identities = 24/114 (21%), Positives = 44/114 (38%)
Query: 189 KSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERV---RQRAELLEKVESMKKKLPWLK 245
K +KT E KR ++ L +L E EK +++ QR + L + K+ + +K
Sbjct: 727 KEELVKTQEELKKRQNESEINLNSLIQELEKSNKKIYTNNQRIQELIDINDQKEDI--IK 784
Query: 246 YDMKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLS 299
+ K N L ++ +E K +K D K+++
Sbjct: 785 FQNLKFHTENTFASTDEAGTSSLVKNNKLTS-NETVEVPKDDKTKTDLGRKRIN 837
Score = 43 (20.2 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 13/42 (30%), Positives = 23/42 (54%)
Query: 398 LNQNKLTLRQCSDRLKDMEDKNNKLLHA-LRNSGAENIFEAY 438
+N + LTL +C + LK+ E K+ H R S + F+++
Sbjct: 403 INTSLLTLGKCINVLKNSE-KSKFQQHVPFRESKLTHYFQSF 443
Score = 39 (18.8 bits), Expect = 0.00018, Sum P(3) = 0.00018
Identities = 13/51 (25%), Positives = 27/51 (52%)
Query: 380 LGVQANQKR--LQKSEKEKILNQNKLTLRQ------CSDRLKDMEDKNNKL 422
L ++ NQ + L K+++E + Q +L RQ + ++++E N K+
Sbjct: 712 LEIKFNQVKAELAKTKEELVKTQEELKKRQNESEINLNSLIQELEKSNKKI 762
>UNIPROTKB|F1NQI1 [details] [associations]
symbol:Gga.55054 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000226 "microtubule cytoskeleton organization"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR008636 Pfam:PF05622
GO:GO:0005737 GO:GO:0000226 GeneTree:ENSGT00690000101702
EMBL:AADN02003644 EMBL:AADN02003645 EMBL:AADN02003646
EMBL:AADN02003647 EMBL:AADN02003648 IPI:IPI00598554
Ensembl:ENSGALT00000017438 ArrayExpress:F1NQI1 Uniprot:F1NQI1
Length = 1597
Score = 130 (50.8 bits), Expect = 2.7e-06, Sum P(3) = 2.7e-06
Identities = 55/242 (22%), Positives = 107/242 (44%)
Query: 643 MQTEQRLIEDEAAKLQKEREEIIN-IVQIEKRKRREMENHINLRKRKLESIEKEDDINTA 701
+ TE++L++++ L+ + N I+ ++K+ E++ L+ + + + +++
Sbjct: 979 LHTEKQLLKEQLKHLETQNVSFNNQILTLQKQNMFLQEHNTALQTQTAKLQVENSTLSSQ 1038
Query: 702 LAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAE-----KHMASIEFDAKIRELEF 756
A L+ Q A L QQ E +NLL + K Y +H+AS+ + + E E
Sbjct: 1039 SASLMAQNALLQNQQTAKENENENLLKQKEQLKAEYESLLQDHEHLASLH-EHQSTEYEL 1097
Query: 757 NLKQHEKL-ALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIE 815
+ QH L L +L E K + L K + + + + + E+E L+
Sbjct: 1098 LINQHSCLKTLHKNLDLEH--KGLGERYNSLMKQKAELDELE-LALKTEREVLQEERRSN 1154
Query: 816 ELEAAIQDNI-SQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALK 874
+ A + + + + FL+ + EYE ++L T + EL R+ A D LK
Sbjct: 1155 AITAGENQKLREELDRVNFLHSQLKAEYEGLHSHTKELKTSLNNSQLELNRWQARYDELK 1214
Query: 875 EK 876
E+
Sbjct: 1215 EQ 1216
Score = 71 (30.1 bits), Expect = 2.6e-05, Sum P(3) = 2.6e-05
Identities = 29/136 (21%), Positives = 62/136 (45%)
Query: 186 LVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLK 245
L E++ +L+ + T++ + Q++A N + E++ E +R+ E+L KV S K + L
Sbjct: 612 LDEENLELRKVVETMRFTSTKMAQIEAENKDLEREKEDLRKNVEML-KVLSKKSERLELS 670
Query: 246 YDMKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINEN 305
Y +E + E K ++ + E +L + ++L
Sbjct: 671 YQSINSE-------NQRLQQMLENSNKKIQELEKEVQATESENQVLQRNLEELKI----- 718
Query: 306 SKRRMDFLEKVDQGVQ 321
S +R++ LEK ++ ++
Sbjct: 719 SAKRLERLEKENKALE 734
Score = 66 (28.3 bits), Expect = 2.7e-06, Sum P(3) = 2.7e-06
Identities = 16/55 (29%), Positives = 34/55 (61%)
Query: 187 VEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKL 241
+EK +K+ + TV +N+L+ + +KD ++V+++ +E+VE M+K+L
Sbjct: 498 IEKENKI--LHETVTETSSKVNKLEFEKKQLQKDFDQVKEK---VERVEEMEKEL 547
Score = 58 (25.5 bits), Expect = 1.7e-05, Sum P(3) = 1.7e-05
Identities = 18/62 (29%), Positives = 34/62 (54%)
Query: 181 VQHCALVEKSSKLKTIECTVKRNGDTLNQLKAL--NVEQ-EKDVERV-RQRAELLEKVES 236
+ H + E SSK+ +E K+ +Q+K VE+ EK++ R+ ++ +L +K +
Sbjct: 504 ILHETVTETSSKVNKLEFEKKQLQKDFDQVKEKVERVEEMEKELHRLEKENEQLTKKATA 563
Query: 237 MK 238
MK
Sbjct: 564 MK 565
Score = 57 (25.1 bits), Expect = 2.7e-06, Sum P(3) = 2.7e-06
Identities = 20/66 (30%), Positives = 38/66 (57%)
Query: 362 AYEPPHDKIEKLGSQILELG---VQANQKRLQKSEKE-KILNQNKLTLRQCSDRLKDMED 417
+Y+ + + ++L Q+LE +Q +K +Q +E E ++L +N L+ + RL+ +E
Sbjct: 670 SYQSINSENQRL-QQMLENSNKKIQELEKEVQATESENQVLQRNLEELKISAKRLERLE- 727
Query: 418 KNNKLL 423
K NK L
Sbjct: 728 KENKAL 733
Score = 57 (25.1 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 23/88 (26%), Positives = 49/88 (55%)
Query: 165 KLLEETEKAVGDPQLPVQHCALVEKSSKL-KTIECTVKRNGDTLNQLKALNVEQEKDVER 223
++LE + K + + + VQ A ++ L + +E +K + L +L+ N E+++ +
Sbjct: 683 QMLENSNKKIQELEKEVQ--ATESENQVLQRNLE-ELKISAKRLERLEKENKALEQEISQ 739
Query: 224 VRQRAELLEKVESMKKKLPWLKYDMKKA 251
+ + +LLEK E+ K+L W + ++K A
Sbjct: 740 LEKDKKLLEK-ET--KRL-WQQVELKDA 763
Score = 52 (23.4 bits), Expect = 6.5e-05, Sum P(3) = 6.5e-05
Identities = 14/42 (33%), Positives = 23/42 (54%)
Query: 209 QLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKK 250
QL N+E K VE +R + + ++E+ K L K D++K
Sbjct: 611 QLDEENLELRKVVETMRFTSTKMAQIEAENKDLEREKEDLRK 652
Score = 44 (20.5 bits), Expect = 5.2e-05, Sum P(3) = 5.2e-05
Identities = 13/47 (27%), Positives = 24/47 (51%)
Query: 387 KRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAEN 433
K Q + K L + K LR+ + LK + K+ +L + ++ +EN
Sbjct: 632 KMAQIEAENKDLEREKEDLRKNVEMLKVLSKKSERLELSYQSINSEN 678
Score = 42 (19.8 bits), Expect = 2.6e-05, Sum P(3) = 2.6e-05
Identities = 33/156 (21%), Positives = 68/156 (43%)
Query: 379 ELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAENIFEAY 438
EL + A KRL++ EKE + +++ + +L + E K L+++ ++
Sbjct: 715 ELKISA--KRLERLEKENKALEQEISQLEKDKKLLEKETKRLWQQVELKDAILDDSTVKL 772
Query: 439 CWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLEDHVGHYIWKSFITQDAGDRDFLAKNL 498
++ L KE + + S+ + +D+ K I Q D+ LA L
Sbjct: 773 AVAEKENKTLEKE-----IAQFRDSSNKLKEFEKDN------KDLIKQVTIDKRTLA-TL 820
Query: 499 KPFDVPILNYVSNESSRKEPFQISEEMRALGISARL 534
+ D+ +L + ++ E ++S E+ +G+S L
Sbjct: 821 RE-DL-VLEKLKSQQLSSELDKLSLELEKIGLSKEL 854
Score = 41 (19.5 bits), Expect = 0.00078, Sum P(3) = 0.00078
Identities = 13/67 (19%), Positives = 30/67 (44%)
Query: 186 LVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLK 245
L EKS +L + V++ L ++K N+ D R + L+ + ++ L+
Sbjct: 181 LEEKSEQLVDSKHEVEQLTLELQKIKQENIHLASDARSARAYRDELDSLREKANRVERLE 240
Query: 246 YDMKKAE 252
++ + +
Sbjct: 241 MELVRCK 247
Score = 40 (19.1 bits), Expect = 0.00098, Sum P(3) = 0.00098
Identities = 19/89 (21%), Positives = 42/89 (47%)
Query: 157 EFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVE 216
E +LS L +T K+ + CA SS++ +E + +T+ +L+ ++
Sbjct: 346 ELEQLSKSTDLADTRKSF---VFELNECA----SSRILKLEKDNQSLQNTIQELRDASLT 398
Query: 217 QE----KDVERVRQRAELLEKVESMKKKL 241
K VE ++ +L +K+E ++ ++
Sbjct: 399 SRESSLKFVELEKENQQLSKKIEKLQNQI 427
>UNIPROTKB|F1P1D5 [details] [associations]
symbol:LOC429272 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003774 "motor activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016459 "myosin
complex" evidence=IEA] InterPro:IPR000048 InterPro:IPR001609
InterPro:IPR002928 Pfam:PF00063 Pfam:PF01576 PRINTS:PR00193
PROSITE:PS50096 SMART:SM00015 SMART:SM00242 GO:GO:0005524
GO:GO:0003774 GO:GO:0016459 GeneTree:ENSGT00680000099788
EMBL:AADN02026141 EMBL:AADN02026142 EMBL:AADN02026143
IPI:IPI00586103 Ensembl:ENSGALT00000022380 ArrayExpress:F1P1D5
Uniprot:F1P1D5
Length = 1872
Score = 160 (61.4 bits), Expect = 2.8e-06, Sum P(3) = 2.8e-06
Identities = 68/296 (22%), Positives = 140/296 (47%)
Query: 643 MQTEQRLIEDEAAKLQKEREEI-INIVQIEKRKRREMENHINLRKRKLESIEKEDDINTA 701
+ ++R +EDE ++L+K+ +++ +++ ++EK K EN + ++ +++ T
Sbjct: 872 LAAKKRKLEDECSELKKDIDDLELSLAKVEKEKHAT-ENKVKNLTEEMAGLDENITKLTK 930
Query: 702 LAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIR-ELEFNLKQ 760
K++ ++ + + + N L + A+ +S+E + KIR +LE ++
Sbjct: 931 EKKILQESHQQALDDLQAEEDKVNTLAKAKVKLEQQADDLESSLEQEKKIRMDLERAKRK 990
Query: 761 HE---KLALQASLHYEDCKKEVEHCRK----HLSDAKRQAESIAFITPELEKEFLEMPTT 813
E KLA ++ + E+ K+++E K L+ + E I+ +L+K+ E+
Sbjct: 991 LEGDLKLAQESIMDLENDKQQLEERLKKKDFELNTLNARIEDEQAISAQLQKKLKELQAR 1050
Query: 814 IEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIED----------LSTKQEADKKEL 863
IEELE ++ + + L +LQE E ++E+ L+ K+EA+ ++L
Sbjct: 1051 IEELEEELEAERTGRAKVEKLRSELLQELEETSERLEEAGGATSVQLELNKKREAEFQKL 1110
Query: 864 KRFLAEIDALKEKWLPTLR----NLVAQINETFSRNFQEMAVAGEVSLDEHESDFD 915
+R L E E TLR + VA+++E N Q + E E + + D
Sbjct: 1111 RRDLEEATLQHEATAATLRKKHADSVAELSEQLD-NLQRVKQKLEKEKSELKLELD 1165
Score = 125 (49.1 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 66/269 (24%), Positives = 117/269 (43%)
Query: 648 RLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTAL-AKLV 706
R ED+ + + + EE V +R +++ + R+LE EKE IN KL
Sbjct: 1186 RTTEDQMNEHRSKLEEAQRTVTDLSTQRAKLQTENSELSRQLE--EKEAFINQLTRGKLT 1243
Query: 707 --DQAADLNIQQFKYAIEIKNLLVEIVS-----C---KWSYAEKHMASIEFDAKIRELEF 756
Q DL +Q + + KN L + C + Y E+ A E + +
Sbjct: 1244 YTQQLEDLK-RQLEEEAKAKNALAHALQSAQHDCDLLREQYEEEMEAKAELQRALSKANS 1302
Query: 757 NLKQ----HEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPT 812
+ Q +E A+Q + E+ KK++ + L +A+ E++ LEK +
Sbjct: 1303 EVAQWRTKYETDAIQRTEELEEAKKKLA---QRLQEAEEAVEAVNAKCSSLEKTKHRLQN 1359
Query: 813 TIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDA 872
IE+L A ++ + + A ++ +N + +++ E+ T+ EA +KE + E+
Sbjct: 1360 EIEDLMADVERSNAAAAALDKKQRNFDKILSEWKQKFEESQTELEASQKEARSLSTELFK 1419
Query: 873 LKEKWLPTLRNLVAQINETFSR---NFQE 898
LK + +L +L ETF R N QE
Sbjct: 1420 LKNAYEESLEHL-----ETFKRENKNLQE 1443
Score = 120 (47.3 bits), Expect = 0.00080, Sum P(2) = 0.00080
Identities = 65/279 (23%), Positives = 117/279 (41%)
Query: 668 VQIEKRKRREMENHINLRKRKLE--SIEKEDDINTALAKLVDQAADL-----NIQQFKYA 720
VQ+E K+RE E LR R LE +++ E T K D A+L N+Q+ K
Sbjct: 1095 VQLELNKKREAEFQ-KLR-RDLEEATLQHEATAATLRKKHADSVAELSEQLDNLQRVKQK 1152
Query: 721 IEIKN--LLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYEDCKKE 778
+E + L +E+ + + A + R E + +H +A D +
Sbjct: 1153 LEKEKSELKLELDDVNSNTEQLIKAKTNLEKMCRTTEDQMNEHRSKLEEAQRTVTDLSTQ 1212
Query: 779 VEHCRKHLSDAKRQAESI-AFITPELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQN 837
+ S+ RQ E AFI +L + L +E+L+ +++ N++ Q+
Sbjct: 1213 RAKLQTENSELSRQLEEKEAFIN-QLTRGKLTYTQQLEDLKRQLEEEAKAKNALAHALQS 1271
Query: 838 ILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQ 897
+ + + Q E+ + EA K EL+R L++ ++ +W Q E +
Sbjct: 1272 AQHDCDLLREQYEE---EMEA-KAELQRALSKANSEVAQWRTKYETDAIQRTEELEEAKK 1327
Query: 898 EMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVLSA 936
++A + + + E+ K L K K R ++E L A
Sbjct: 1328 KLAQRLQEAEEAVEAVNAKCSSLEKTKHRLQNEIEDLMA 1366
Score = 62 (26.9 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 51/253 (20%), Positives = 108/253 (42%)
Query: 165 KLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECT-VKRNGDTLNQLKALNVEQEKDVER 223
K+ E TE+ + ++ + L K KL+ EC+ +K++ D L +L VE+EK
Sbjct: 854 KVKEMTERLEEEEEMNAE---LAAKKRKLED-ECSELKKDIDDL-ELSLAKVEKEKHATE 908
Query: 224 VRQRAELLEKVESMKKKLPWLKYDMKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEG 283
+ + L E++ + + + L + K + NTL + +E
Sbjct: 909 NKVK-NLTEEMAGLDENITKLTKEKKILQ--ESHQQALDDLQAEEDKVNTLAKAKVKLEQ 965
Query: 284 KKQE-KAILDGDCKKLSSLINENSKRRMDF-LEKVDQGVQVQGKYKXXXXXXXXXXXXXX 341
+ + ++ L+ + KK+ + E +KR+++ L+ + + K
Sbjct: 966 QADDLESSLEQE-KKIRMDL-ERAKRKLEGDLKLAQESIMDLENDKQQLEERLKKKDFEL 1023
Query: 342 XILKARXXXXXXXXXXQTVPAYEPPHDKIEKLGSQILELGVQANQKRLQKSEKEKILNQN 401
L AR Q + A K+++L ++I EL + +R +++ EK+ ++
Sbjct: 1024 NTLNARIEDE------QAISAQL--QKKLKELQARIEELEEELEAERTGRAKVEKLRSEL 1075
Query: 402 KLTLRQCSDRLKD 414
L + S+RL++
Sbjct: 1076 LQELEETSERLEE 1088
Score = 55 (24.4 bits), Expect = 2.8e-06, Sum P(3) = 2.8e-06
Identities = 17/50 (34%), Positives = 30/50 (60%)
Query: 378 LELGVQANQKRLQKSEKE-KILNQNKLTL----RQCSDRLKDMEDKNNKL 422
L+L VQA Q L +E+ L +NK+ L ++ ++RL++ E+ N +L
Sbjct: 823 LQLQVQAEQDNLADAEERCDQLIKNKIQLEAKVKEMTERLEEEEEMNAEL 872
Score = 39 (18.8 bits), Expect = 2.8e-06, Sum P(3) = 2.8e-06
Identities = 8/32 (25%), Positives = 22/32 (68%)
Query: 221 VERVRQRAELLEKVESMKKKLPWLKYDMKKAE 252
++ + + AE +++++MK++ LK ++K+E
Sbjct: 772 IKPLLKSAETEKEMQTMKEEFGHLKEALEKSE 803
>UNIPROTKB|F1NWN3 [details] [associations]
symbol:MYH11 "Myosin-11" species:9031 "Gallus gallus"
[GO:0003774 "motor activity" evidence=IEA] [GO:0003779 "actin
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016459 "myosin complex" evidence=IEA] InterPro:IPR000048
InterPro:IPR001609 InterPro:IPR002928 InterPro:IPR004009
Pfam:PF00063 Pfam:PF01576 Pfam:PF02736 PRINTS:PR00193
PROSITE:PS50096 SMART:SM00015 SMART:SM00242 GO:GO:0005524
GO:GO:0003774 GO:GO:0016459 EMBL:AADN02023593
GeneTree:ENSGT00650000092896 EMBL:AADN02023591 EMBL:AADN02023592
IPI:IPI00591959 Ensembl:ENSGALT00000010535 Uniprot:F1NWN3
Length = 1951
Score = 138 (53.6 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 65/275 (23%), Positives = 124/275 (45%)
Query: 643 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLE----SIEKE-DD 697
+Q E++ +L K+ E ++ ++RK+R + K+KLE +E + D
Sbjct: 1567 LQARDEQNEEKRRQLLKQLHEHETELE-DERKQRALAA---AAKKKLEVDVKDLESQVDS 1622
Query: 698 INTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFN 757
N A + + Q L Q Y ++ + + E + +A++ +L+ +
Sbjct: 1623 ANKAREEAIKQLRKLQAQMKDYQRDLDDARAAREEIFATARENEKKAKNLEAELIQLQED 1682
Query: 758 LKQHEKLALQASLHYEDCKKEVEHC---RKHLSDAKRQAES-IAFITPELEKEFLEMPTT 813
L E+ QA L E+ +E+ R L D KR+ E+ IA + EL++E + T
Sbjct: 1683 LAAAERARKQADLEKEEMAEELASANSGRTSLQDEKRRLEARIAQLEEELDEEHSNIETM 1742
Query: 814 IEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEID-A 872
+ + A+Q Q N+ + Q+ E+ ++Q+E +Q KEL+ L E++ A
Sbjct: 1743 SDRMRKAVQQ-AEQLNNELATERATAQKNENARQQLE----RQN---KELRSKLQEMEGA 1794
Query: 873 LKEKWLPTLRNL---VAQINETFSRNFQEMAVAGE 904
+K K+ T+ L +A + E + +E A +
Sbjct: 1795 VKSKFKSTIAALEAKIASLEEQLEQEAREKQAAAK 1829
Score = 132 (51.5 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 67/289 (23%), Positives = 135/289 (46%)
Query: 644 QTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREM--ENHINLRKRKLESIEKEDDINTA 701
+ E RL ++E K ++E E+I ++ E E E + + K + +KE+++ A
Sbjct: 1025 ELEVRLKKEE--KSRQELEKIKRKLEGESSDLHEQIAELQAQIAELKAQLAKKEEELQAA 1082
Query: 702 LAKLVDQAADLN--IQQFK-YAIEIKNLLVEIVSCKWSY--AEKHMASI--EFDAKIREL 754
LA+L D+ + N +++ + I +L ++ S K + AEK + E +A EL
Sbjct: 1083 LARLEDETSQKNNALKKIRELESHISDLQEDLESEKAARNKAEKQKRDLSEELEALKTEL 1142
Query: 755 EFNLKQ---HEKLALQASLHYEDCKKEVEH-CRKHLSDAK--RQ--AESIAFITPELEKE 806
E L ++L + K+ +E R H + + RQ +++ +T +LE +
Sbjct: 1143 EDTLDTTATQQELRAKREQEVTVLKRALEEETRTHEAQVQEMRQKHTQAVEELTEQLE-Q 1201
Query: 807 FLEMPTTIEELEAAIQ-DNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKR 865
F +++ + ++ DN AN I L+Q Q+ EH+++++E ++ + +R
Sbjct: 1202 FKRAKANLDKTKQTLEKDNADLANEIRSLSQ-AKQDVEHKKKKLEVQLQDLQSKYSDGER 1260
Query: 866 FLAEIDALKEKWLPTLRNLVAQINETFSRNFQ---EMAVAGEVSLDEHE 911
E++ K + N+ + +NE S+N + ++A G D E
Sbjct: 1261 VRTELNEKVHKLQIEVENVTSLLNEAESKNIKLTKDVATLGSQLQDTQE 1309
Score = 125 (49.1 bits), Expect = 6.5e-05, Sum P(2) = 6.5e-05
Identities = 73/316 (23%), Positives = 143/316 (45%)
Query: 643 MQTEQRLIEDEAAKLQKER---EEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDIN 699
M+ + ++ED+ KL KER EE ++ + + E ++ K K ES+ E ++
Sbjct: 970 MEDDILIMEDQNNKLTKERKLLEERVSDLTTNLAEEEEKAKNLTKLKNKHESMISELEVR 1029
Query: 700 TALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLK 759
L K ++ + +++ K +E ++ ++ H E A+I EL+ L
Sbjct: 1030 --LKK--EEKSRQELEKIKRKLEGES------------SDLHEQIAELQAQIAELKAQLA 1073
Query: 760 QHEKLALQASL-HYED-------CKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMP 811
+ E+ LQA+L ED K++ H+SD + ES + EK+ ++
Sbjct: 1074 KKEE-ELQAALARLEDETSQKNNALKKIRELESHISDLQEDLESEKAARNKAEKQKRDLS 1132
Query: 812 TTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELK-RFLAEI 870
+E L+ ++D + + L QE +R +E+ + EA +E++ + +
Sbjct: 1133 EELEALKTELEDTLDTTATQQELRAKREQEVTVLKRALEEETRTHEAQVQEMRQKHTQAV 1192
Query: 871 DALKEKWLPTLRNLVAQINETFSRNFQEMA-VAGEV-SLDEHESDFDKFGILIKVKFRQS 928
+ L E+ L + A +++T ++ A +A E+ SL + + D + K K +
Sbjct: 1193 EELTEQ-LEQFKRAKANLDKTKQTLEKDNADLANEIRSLSQAKQDVEH-----KKK-KLE 1245
Query: 929 GQLEVLSAHHQSGGER 944
QL+ L + + S GER
Sbjct: 1246 VQLQDLQSKY-SDGER 1260
Score = 68 (29.0 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 18/54 (33%), Positives = 31/54 (57%)
Query: 371 EKLGSQILELGVQANQKRL--QKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKL 422
+K+ Q+L+L Q ++ QK + EK+ K+ ++ D + MED+NNKL
Sbjct: 933 KKMQQQMLDLEEQLEEEEAARQKLQLEKVTADGKI--KKMEDDILIMEDQNNKL 984
Score = 64 (27.6 bits), Expect = 7.4e-06, Sum P(2) = 7.4e-06
Identities = 54/292 (18%), Positives = 113/292 (38%)
Query: 186 LVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEK---DVERVRQRAE-----LLEKVESM 237
L E+ K K + ++ +++L+ ++EK ++E+++++ E L E++ +
Sbjct: 1002 LAEEEEKAKNLTKLKNKHESMISELEVRLKKEEKSRQELEKIKRKLEGESSDLHEQIAEL 1061
Query: 238 KKKLPWLKYDMKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKK 297
+ ++ LK + K E N L K I + + L D +
Sbjct: 1062 QAQIAELKAQLAKKEE-ELQAALARLEDETSQKNNAL----KKIRELESHISDLQEDLES 1116
Query: 298 LSSLINENSKRRMDFLEKVDQ-GVQVQGKYKXXXXXXXXXXXXXX--XILKARXXXXXXX 354
+ N+ K++ D E+++ +++ +LK
Sbjct: 1117 EKAARNKAEKQKRDLSEELEALKTELEDTLDTTATQQELRAKREQEVTVLKRALEEETRT 1176
Query: 355 XXXQTVPAYEPPHDKIEKLGSQILELG-VQAN-QKRLQKSEKEKILNQNKLTLRQCSDRL 412
Q + +E+L Q+ + +AN K Q EK+ N++ R S
Sbjct: 1177 HEAQVQEMRQKHTQAVEELTEQLEQFKRAKANLDKTKQTLEKDNADLANEI--RSLSQAK 1234
Query: 413 KDMEDKNNKLLHALRNSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSN 464
+D+E K KL L +++ Y ++ R ELN++ + L++ V N
Sbjct: 1235 QDVEHKKKKLEVQL-----QDLQSKYSDGERVRTELNEKVHK---LQIEVEN 1278
Score = 54 (24.1 bits), Expect = 7.7e-05, Sum P(2) = 7.7e-05
Identities = 56/303 (18%), Positives = 112/303 (36%)
Query: 169 ETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRA 228
E + V Q+ V++ + ++ K I+ T ++ TL L QE E RQ+
Sbjct: 1264 ELNEKVHKLQIEVENVTSLLNEAESKNIKLT--KDVATLGS--QLQDTQELLQEETRQKL 1319
Query: 229 EL---LEKVESMKKKLP-WLKYDMKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGK 284
+ L ++E K L L +++ + + L EF+ +E
Sbjct: 1320 NVTTKLRQLEDDKNSLQEQLDEEVEAKQNLERHISTLTIQLSDSK--KKLQEFTATVETM 1377
Query: 285 KQEKAILDGDCKKLSSLINENSKRRMDFLEKVDQGVQVQGKYKXXXXXXXXXXXXXXXIL 344
++ K L + + L+ E + D LEK ++Q + +
Sbjct: 1378 EEGKKKLQREIESLTQQFEEKAAS-YDKLEKTKN--RLQQELDDLVVDLDNQRQLVSNLE 1434
Query: 345 KARXXXXXXXXXXQTVPA-YEPPHDKIEKLGSQILELGVQANQKRLQKS--EKEKILNQN 401
K + + + + Y D+ E + E + + L+++ KE++ N
Sbjct: 1435 KKQKKFDQMLAEEKNISSKYADERDRAEAEARE-KETKALSLARALEEALEAKEELERTN 1493
Query: 402 KLTLRQCSDRLKDMED--KNNKLLHALRNSGAENIFEAYCWLQQHRHELNKEAYGPVLLE 459
K+ + D + +D KN L + + + + E L++ EL + LE
Sbjct: 1494 KMLKAEMEDLVSSKDDVGKNVHELEKSKRTLEQQVEEMKTQLEELEDELQAAEDAKLRLE 1553
Query: 460 VNV 462
VN+
Sbjct: 1554 VNM 1556
Score = 53 (23.7 bits), Expect = 9.8e-05, Sum P(2) = 9.8e-05
Identities = 43/179 (24%), Positives = 72/179 (40%)
Query: 77 ATSIGAYVKRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEIT 136
AT KR +E +K +L +T+ + + R K V E LE
Sbjct: 1150 ATQQELRAKREQEVTVLKRALEEETRTHEAQVQ---EMRQKH----TQAVEELTEQLEQF 1202
Query: 137 KRFNIQVNNLTQFLPQDRVC---EFAKLSPVKLLEETEKAVGDPQLP-VQ------HCAL 186
KR ++ Q L +D E LS K E +K + QL +Q
Sbjct: 1203 KRAKANLDKTKQTLEKDNADLANEIRSLSQAKQDVEHKKKKLEVQLQDLQSKYSDGERVR 1262
Query: 187 VEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDV----ERVRQRAELLEKVESMKKKL 241
E + K+ ++ V+ LN+ ++ N++ KDV +++ ELL+ E ++KL
Sbjct: 1263 TELNEKVHKLQIEVENVTSLLNEAESKNIKLTKDVATLGSQLQDTQELLQ--EETRQKL 1319
Score = 49 (22.3 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 21/85 (24%), Positives = 45/85 (52%)
Query: 367 HDKIEKLGSQILELGVQ-ANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHA 425
H K +KL Q+ +L + ++ +R++ EK+ ++ ++ + + L + E KN KL
Sbjct: 1239 HKK-KKLEVQLQDLQSKYSDGERVRTELNEKV-HKLQIEVENVTSLLNEAESKNIKLTKD 1296
Query: 426 LRNSGAENIFEAYCWLQQH-RHELN 449
+ G++ + + LQ+ R +LN
Sbjct: 1297 VATLGSQ-LQDTQELLQEETRQKLN 1320
Score = 49 (22.3 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 45/205 (21%), Positives = 75/205 (36%)
Query: 209 QLKALNVEQEKDVERVRQRAEL-LEKVESMKKKL---PWLKYDMKKAE---YIXXXXXXX 261
+++A + E ++ ER +Q+AE L+++E +L L + +AE Y
Sbjct: 840 EMQAKDEELQRTKER-QQKAEAELKELEQKHTQLCEEKNLLQEKLQAETELYAEAEEMRV 898
Query: 262 XXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSL---INENSKRRMDFLEKVD- 317
LHE IE +++ L + KK+ + E + +K+
Sbjct: 899 RLAAKKQELEEILHEMEARIEEEEERSQQLQAEKKKMQQQMLDLEEQLEEEEAARQKLQL 958
Query: 318 QGVQVQGKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPAYEPPHDK-IEKLG-- 374
+ V GK K + K R T A E K + KL
Sbjct: 959 EKVTADGKIKKMEDDILIMEDQNNKLTKERKLLEERVSDLTTNLAEEEEKAKNLTKLKNK 1018
Query: 375 --SQILELGVQANQKRLQKSEKEKI 397
S I EL V+ ++ + E EKI
Sbjct: 1019 HESMISELEVRLKKEEKSRQELEKI 1043
Score = 49 (22.3 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 44/228 (19%), Positives = 75/228 (32%)
Query: 201 KRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAEYIXXXXXX 260
K+ D +L+AL E E ++ + EL K E L + +
Sbjct: 1126 KQKRDLSEELEALKTELEDTLDTTATQQELRAKREQEVTVLKRALEEETRTHEAQVQEMR 1185
Query: 261 XXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENSKRRMDFLEKVDQ-G 319
L +F + + K L+ D L++ I S+ + D K +
Sbjct: 1186 QKHTQAVEELTEQLEQFKRAKANLDKTKQTLEKDNADLANEIRSLSQAKQDVEHKKKKLE 1245
Query: 320 VQVQGKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPAYEPPHDK-IEKLGSQIL 378
VQ+Q + K + + K + LGSQ+
Sbjct: 1246 VQLQDLQSKYSDGERVRTELNEKVHKLQIEVENVTSLLNEAESKNIKLTKDVATLGSQL- 1304
Query: 379 ELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHAL 426
Q Q+ LQ+ ++K+ N T +L+ +ED N L L
Sbjct: 1305 ----QDTQELLQEETRQKL---NVTT------KLRQLEDDKNSLQEQL 1339
Score = 44 (20.5 bits), Expect = 0.00080, Sum P(2) = 0.00080
Identities = 17/67 (25%), Positives = 30/67 (44%)
Query: 389 LQKSEKEKILNQNKLTLRQCSDRLKDM--EDKNNKLLHALRNSGAENIFEAYCWLQQH-- 444
+ + + K+ + KL + SD ++ E++ K L L+N I E L++
Sbjct: 976 IMEDQNNKLTKERKLLEERVSDLTTNLAEEEEKAKNLTKLKNKHESMISELEVRLKKEEK 1035
Query: 445 -RHELNK 450
R EL K
Sbjct: 1036 SRQELEK 1042
>UNIPROTKB|G1K307 [details] [associations]
symbol:MYH11 "Myosin-11" species:9031 "Gallus gallus"
[GO:0003774 "motor activity" evidence=IEA] [GO:0003779 "actin
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016459 "myosin complex" evidence=IEA] InterPro:IPR000048
InterPro:IPR001609 InterPro:IPR002928 InterPro:IPR004009
Pfam:PF00063 Pfam:PF01576 Pfam:PF02736 PRINTS:PR00193
PROSITE:PS50096 SMART:SM00015 SMART:SM00242 GO:GO:0005524
GO:GO:0003774 GO:GO:0016459 EMBL:AADN02023593
GeneTree:ENSGT00650000092896 EMBL:AADN02023591 EMBL:AADN02023592
Ensembl:ENSGALT00000010533 Uniprot:G1K307
Length = 1972
Score = 138 (53.6 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 65/275 (23%), Positives = 124/275 (45%)
Query: 643 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLE----SIEKE-DD 697
+Q E++ +L K+ E ++ ++RK+R + K+KLE +E + D
Sbjct: 1579 LQARDEQNEEKRRQLLKQLHEHETELE-DERKQRALAA---AAKKKLEVDVKDLESQVDS 1634
Query: 698 INTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFN 757
N A + + Q L Q Y ++ + + E + +A++ +L+ +
Sbjct: 1635 ANKAREEAIKQLRKLQAQMKDYQRDLDDARAAREEIFATARENEKKAKNLEAELIQLQED 1694
Query: 758 LKQHEKLALQASLHYEDCKKEVEHC---RKHLSDAKRQAES-IAFITPELEKEFLEMPTT 813
L E+ QA L E+ +E+ R L D KR+ E+ IA + EL++E + T
Sbjct: 1695 LAAAERARKQADLEKEEMAEELASANSGRTSLQDEKRRLEARIAQLEEELDEEHSNIETM 1754
Query: 814 IEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEID-A 872
+ + A+Q Q N+ + Q+ E+ ++Q+E +Q KEL+ L E++ A
Sbjct: 1755 SDRMRKAVQQ-AEQLNNELATERATAQKNENARQQLE----RQN---KELRSKLQEMEGA 1806
Query: 873 LKEKWLPTLRNL---VAQINETFSRNFQEMAVAGE 904
+K K+ T+ L +A + E + +E A +
Sbjct: 1807 VKSKFKSTIAALEAKIASLEEQLEQEAREKQAAAK 1841
Score = 132 (51.5 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 67/289 (23%), Positives = 135/289 (46%)
Query: 644 QTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREM--ENHINLRKRKLESIEKEDDINTA 701
+ E RL ++E K ++E E+I ++ E E E + + K + +KE+++ A
Sbjct: 1037 ELEVRLKKEE--KSRQELEKIKRKLEGESSDLHEQIAELQAQIAELKAQLAKKEEELQAA 1094
Query: 702 LAKLVDQAADLN--IQQFK-YAIEIKNLLVEIVSCKWSY--AEKHMASI--EFDAKIREL 754
LA+L D+ + N +++ + I +L ++ S K + AEK + E +A EL
Sbjct: 1095 LARLEDETSQKNNALKKIRELESHISDLQEDLESEKAARNKAEKQKRDLSEELEALKTEL 1154
Query: 755 EFNLKQ---HEKLALQASLHYEDCKKEVEH-CRKHLSDAK--RQ--AESIAFITPELEKE 806
E L ++L + K+ +E R H + + RQ +++ +T +LE +
Sbjct: 1155 EDTLDTTATQQELRAKREQEVTVLKRALEEETRTHEAQVQEMRQKHTQAVEELTEQLE-Q 1213
Query: 807 FLEMPTTIEELEAAIQ-DNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKR 865
F +++ + ++ DN AN I L+Q Q+ EH+++++E ++ + +R
Sbjct: 1214 FKRAKANLDKTKQTLEKDNADLANEIRSLSQ-AKQDVEHKKKKLEVQLQDLQSKYSDGER 1272
Query: 866 FLAEIDALKEKWLPTLRNLVAQINETFSRNFQ---EMAVAGEVSLDEHE 911
E++ K + N+ + +NE S+N + ++A G D E
Sbjct: 1273 VRTELNEKVHKLQIEVENVTSLLNEAESKNIKLTKDVATLGSQLQDTQE 1321
Score = 125 (49.1 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 73/316 (23%), Positives = 143/316 (45%)
Query: 643 MQTEQRLIEDEAAKLQKER---EEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDIN 699
M+ + ++ED+ KL KER EE ++ + + E ++ K K ES+ E ++
Sbjct: 982 MEDDILIMEDQNNKLTKERKLLEERVSDLTTNLAEEEEKAKNLTKLKNKHESMISELEVR 1041
Query: 700 TALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLK 759
L K ++ + +++ K +E ++ ++ H E A+I EL+ L
Sbjct: 1042 --LKK--EEKSRQELEKIKRKLEGES------------SDLHEQIAELQAQIAELKAQLA 1085
Query: 760 QHEKLALQASL-HYED-------CKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMP 811
+ E+ LQA+L ED K++ H+SD + ES + EK+ ++
Sbjct: 1086 KKEE-ELQAALARLEDETSQKNNALKKIRELESHISDLQEDLESEKAARNKAEKQKRDLS 1144
Query: 812 TTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELK-RFLAEI 870
+E L+ ++D + + L QE +R +E+ + EA +E++ + +
Sbjct: 1145 EELEALKTELEDTLDTTATQQELRAKREQEVTVLKRALEEETRTHEAQVQEMRQKHTQAV 1204
Query: 871 DALKEKWLPTLRNLVAQINETFSRNFQEMA-VAGEV-SLDEHESDFDKFGILIKVKFRQS 928
+ L E+ L + A +++T ++ A +A E+ SL + + D + K K +
Sbjct: 1205 EELTEQ-LEQFKRAKANLDKTKQTLEKDNADLANEIRSLSQAKQDVEH-----KKK-KLE 1257
Query: 929 GQLEVLSAHHQSGGER 944
QL+ L + + S GER
Sbjct: 1258 VQLQDLQSKY-SDGER 1272
Score = 68 (29.0 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 18/54 (33%), Positives = 31/54 (57%)
Query: 371 EKLGSQILELGVQANQKRL--QKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKL 422
+K+ Q+L+L Q ++ QK + EK+ K+ ++ D + MED+NNKL
Sbjct: 945 KKMQQQMLDLEEQLEEEEAARQKLQLEKVTADGKI--KKMEDDILIMEDQNNKL 996
Score = 64 (27.6 bits), Expect = 7.5e-06, Sum P(2) = 7.5e-06
Identities = 54/292 (18%), Positives = 113/292 (38%)
Query: 186 LVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEK---DVERVRQRAE-----LLEKVESM 237
L E+ K K + ++ +++L+ ++EK ++E+++++ E L E++ +
Sbjct: 1014 LAEEEEKAKNLTKLKNKHESMISELEVRLKKEEKSRQELEKIKRKLEGESSDLHEQIAEL 1073
Query: 238 KKKLPWLKYDMKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKK 297
+ ++ LK + K E N L K I + + L D +
Sbjct: 1074 QAQIAELKAQLAKKEE-ELQAALARLEDETSQKNNAL----KKIRELESHISDLQEDLES 1128
Query: 298 LSSLINENSKRRMDFLEKVDQ-GVQVQGKYKXXXXXXXXXXXXXX--XILKARXXXXXXX 354
+ N+ K++ D E+++ +++ +LK
Sbjct: 1129 EKAARNKAEKQKRDLSEELEALKTELEDTLDTTATQQELRAKREQEVTVLKRALEEETRT 1188
Query: 355 XXXQTVPAYEPPHDKIEKLGSQILELG-VQAN-QKRLQKSEKEKILNQNKLTLRQCSDRL 412
Q + +E+L Q+ + +AN K Q EK+ N++ R S
Sbjct: 1189 HEAQVQEMRQKHTQAVEELTEQLEQFKRAKANLDKTKQTLEKDNADLANEI--RSLSQAK 1246
Query: 413 KDMEDKNNKLLHALRNSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSN 464
+D+E K KL L +++ Y ++ R ELN++ + L++ V N
Sbjct: 1247 QDVEHKKKKLEVQL-----QDLQSKYSDGERVRTELNEKVHK---LQIEVEN 1290
Score = 54 (24.1 bits), Expect = 7.9e-05, Sum P(2) = 7.9e-05
Identities = 56/303 (18%), Positives = 112/303 (36%)
Query: 169 ETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRA 228
E + V Q+ V++ + ++ K I+ T ++ TL L QE E RQ+
Sbjct: 1276 ELNEKVHKLQIEVENVTSLLNEAESKNIKLT--KDVATLGS--QLQDTQELLQEETRQKL 1331
Query: 229 EL---LEKVESMKKKLP-WLKYDMKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGK 284
+ L ++E K L L +++ + + L EF+ +E
Sbjct: 1332 NVTTKLRQLEDDKNSLQEQLDEEVEAKQNLERHISTLTIQLSDSK--KKLQEFTATVETM 1389
Query: 285 KQEKAILDGDCKKLSSLINENSKRRMDFLEKVDQGVQVQGKYKXXXXXXXXXXXXXXXIL 344
++ K L + + L+ E + D LEK ++Q + +
Sbjct: 1390 EEGKKKLQREIESLTQQFEEKAAS-YDKLEKTKN--RLQQELDDLVVDLDNQRQLVSNLE 1446
Query: 345 KARXXXXXXXXXXQTVPA-YEPPHDKIEKLGSQILELGVQANQKRLQKS--EKEKILNQN 401
K + + + + Y D+ E + E + + L+++ KE++ N
Sbjct: 1447 KKQKKFDQMLAEEKNISSKYADERDRAEAEARE-KETKALSLARALEEALEAKEELERTN 1505
Query: 402 KLTLRQCSDRLKDMED--KNNKLLHALRNSGAENIFEAYCWLQQHRHELNKEAYGPVLLE 459
K+ + D + +D KN L + + + + E L++ EL + LE
Sbjct: 1506 KMLKAEMEDLVSSKDDVGKNVHELEKSKRTLEQQVEEMKTQLEELEDELQAAEDAKLRLE 1565
Query: 460 VNV 462
VN+
Sbjct: 1566 VNM 1568
Score = 53 (23.7 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 43/179 (24%), Positives = 72/179 (40%)
Query: 77 ATSIGAYVKRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEIT 136
AT KR +E +K +L +T+ + + R K V E LE
Sbjct: 1162 ATQQELRAKREQEVTVLKRALEEETRTHEAQVQ---EMRQKH----TQAVEELTEQLEQF 1214
Query: 137 KRFNIQVNNLTQFLPQDRVC---EFAKLSPVKLLEETEKAVGDPQLP-VQ------HCAL 186
KR ++ Q L +D E LS K E +K + QL +Q
Sbjct: 1215 KRAKANLDKTKQTLEKDNADLANEIRSLSQAKQDVEHKKKKLEVQLQDLQSKYSDGERVR 1274
Query: 187 VEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDV----ERVRQRAELLEKVESMKKKL 241
E + K+ ++ V+ LN+ ++ N++ KDV +++ ELL+ E ++KL
Sbjct: 1275 TELNEKVHKLQIEVENVTSLLNEAESKNIKLTKDVATLGSQLQDTQELLQ--EETRQKL 1331
Score = 49 (22.3 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 21/85 (24%), Positives = 45/85 (52%)
Query: 367 HDKIEKLGSQILELGVQ-ANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHA 425
H K +KL Q+ +L + ++ +R++ EK+ ++ ++ + + L + E KN KL
Sbjct: 1251 HKK-KKLEVQLQDLQSKYSDGERVRTELNEKV-HKLQIEVENVTSLLNEAESKNIKLTKD 1308
Query: 426 LRNSGAENIFEAYCWLQQH-RHELN 449
+ G++ + + LQ+ R +LN
Sbjct: 1309 VATLGSQ-LQDTQELLQEETRQKLN 1332
Score = 49 (22.3 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 45/205 (21%), Positives = 75/205 (36%)
Query: 209 QLKALNVEQEKDVERVRQRAEL-LEKVESMKKKL---PWLKYDMKKAE---YIXXXXXXX 261
+++A + E ++ ER +Q+AE L+++E +L L + +AE Y
Sbjct: 852 EMQAKDEELQRTKER-QQKAEAELKELEQKHTQLCEEKNLLQEKLQAETELYAEAEEMRV 910
Query: 262 XXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSL---INENSKRRMDFLEKVD- 317
LHE IE +++ L + KK+ + E + +K+
Sbjct: 911 RLAAKKQELEEILHEMEARIEEEEERSQQLQAEKKKMQQQMLDLEEQLEEEEAARQKLQL 970
Query: 318 QGVQVQGKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPAYEPPHDK-IEKLG-- 374
+ V GK K + K R T A E K + KL
Sbjct: 971 EKVTADGKIKKMEDDILIMEDQNNKLTKERKLLEERVSDLTTNLAEEEEKAKNLTKLKNK 1030
Query: 375 --SQILELGVQANQKRLQKSEKEKI 397
S I EL V+ ++ + E EKI
Sbjct: 1031 HESMISELEVRLKKEEKSRQELEKI 1055
Score = 49 (22.3 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 44/228 (19%), Positives = 75/228 (32%)
Query: 201 KRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAEYIXXXXXX 260
K+ D +L+AL E E ++ + EL K E L + +
Sbjct: 1138 KQKRDLSEELEALKTELEDTLDTTATQQELRAKREQEVTVLKRALEEETRTHEAQVQEMR 1197
Query: 261 XXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENSKRRMDFLEKVDQ-G 319
L +F + + K L+ D L++ I S+ + D K +
Sbjct: 1198 QKHTQAVEELTEQLEQFKRAKANLDKTKQTLEKDNADLANEIRSLSQAKQDVEHKKKKLE 1257
Query: 320 VQVQGKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPAYEPPHDK-IEKLGSQIL 378
VQ+Q + K + + K + LGSQ+
Sbjct: 1258 VQLQDLQSKYSDGERVRTELNEKVHKLQIEVENVTSLLNEAESKNIKLTKDVATLGSQL- 1316
Query: 379 ELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHAL 426
Q Q+ LQ+ ++K+ N T +L+ +ED N L L
Sbjct: 1317 ----QDTQELLQEETRQKL---NVTT------KLRQLEDDKNSLQEQL 1351
Score = 44 (20.5 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 17/67 (25%), Positives = 30/67 (44%)
Query: 389 LQKSEKEKILNQNKLTLRQCSDRLKDM--EDKNNKLLHALRNSGAENIFEAYCWLQQH-- 444
+ + + K+ + KL + SD ++ E++ K L L+N I E L++
Sbjct: 988 IMEDQNNKLTKERKLLEERVSDLTTNLAEEEEKAKNLTKLKNKHESMISELEVRLKKEEK 1047
Query: 445 -RHELNK 450
R EL K
Sbjct: 1048 SRQELEK 1054
>UNIPROTKB|E1BXA5 [details] [associations]
symbol:MYH11 "Myosin-11" species:9031 "Gallus gallus"
[GO:0003774 "motor activity" evidence=IEA] [GO:0003779 "actin
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016459 "myosin complex" evidence=IEA] InterPro:IPR000048
InterPro:IPR001609 InterPro:IPR002928 InterPro:IPR004009
Pfam:PF00063 Pfam:PF01576 Pfam:PF02736 PRINTS:PR00193
PROSITE:PS50096 SMART:SM00015 SMART:SM00242 GO:GO:0005524
GO:GO:0003774 GO:GO:0016459 EMBL:AADN02023593
GeneTree:ENSGT00650000092896 EMBL:AADN02023591 EMBL:AADN02023592
IPI:IPI00597357 Ensembl:ENSGALT00000010534 Uniprot:E1BXA5
Length = 1979
Score = 138 (53.6 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 65/275 (23%), Positives = 124/275 (45%)
Query: 643 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLE----SIEKE-DD 697
+Q E++ +L K+ E ++ ++RK+R + K+KLE +E + D
Sbjct: 1586 LQARDEQNEEKRRQLLKQLHEHETELE-DERKQRALAA---AAKKKLEVDVKDLESQVDS 1641
Query: 698 INTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFN 757
N A + + Q L Q Y ++ + + E + +A++ +L+ +
Sbjct: 1642 ANKAREEAIKQLRKLQAQMKDYQRDLDDARAAREEIFATARENEKKAKNLEAELIQLQED 1701
Query: 758 LKQHEKLALQASLHYEDCKKEVEHC---RKHLSDAKRQAES-IAFITPELEKEFLEMPTT 813
L E+ QA L E+ +E+ R L D KR+ E+ IA + EL++E + T
Sbjct: 1702 LAAAERARKQADLEKEEMAEELASANSGRTSLQDEKRRLEARIAQLEEELDEEHSNIETM 1761
Query: 814 IEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEID-A 872
+ + A+Q Q N+ + Q+ E+ ++Q+E +Q KEL+ L E++ A
Sbjct: 1762 SDRMRKAVQQ-AEQLNNELATERATAQKNENARQQLE----RQN---KELRSKLQEMEGA 1813
Query: 873 LKEKWLPTLRNL---VAQINETFSRNFQEMAVAGE 904
+K K+ T+ L +A + E + +E A +
Sbjct: 1814 VKSKFKSTIAALEAKIASLEEQLEQEAREKQAAAK 1848
Score = 132 (51.5 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 67/289 (23%), Positives = 135/289 (46%)
Query: 644 QTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREM--ENHINLRKRKLESIEKEDDINTA 701
+ E RL ++E K ++E E+I ++ E E E + + K + +KE+++ A
Sbjct: 1044 ELEVRLKKEE--KSRQELEKIKRKLEGESSDLHEQIAELQAQIAELKAQLAKKEEELQAA 1101
Query: 702 LAKLVDQAADLN--IQQFK-YAIEIKNLLVEIVSCKWSY--AEKHMASI--EFDAKIREL 754
LA+L D+ + N +++ + I +L ++ S K + AEK + E +A EL
Sbjct: 1102 LARLEDETSQKNNALKKIRELESHISDLQEDLESEKAARNKAEKQKRDLSEELEALKTEL 1161
Query: 755 EFNLKQ---HEKLALQASLHYEDCKKEVEH-CRKHLSDAK--RQ--AESIAFITPELEKE 806
E L ++L + K+ +E R H + + RQ +++ +T +LE +
Sbjct: 1162 EDTLDTTATQQELRAKREQEVTVLKRALEEETRTHEAQVQEMRQKHTQAVEELTEQLE-Q 1220
Query: 807 FLEMPTTIEELEAAIQ-DNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKR 865
F +++ + ++ DN AN I L+Q Q+ EH+++++E ++ + +R
Sbjct: 1221 FKRAKANLDKTKQTLEKDNADLANEIRSLSQ-AKQDVEHKKKKLEVQLQDLQSKYSDGER 1279
Query: 866 FLAEIDALKEKWLPTLRNLVAQINETFSRNFQ---EMAVAGEVSLDEHE 911
E++ K + N+ + +NE S+N + ++A G D E
Sbjct: 1280 VRTELNEKVHKLQIEVENVTSLLNEAESKNIKLTKDVATLGSQLQDTQE 1328
Score = 125 (49.1 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 73/316 (23%), Positives = 143/316 (45%)
Query: 643 MQTEQRLIEDEAAKLQKER---EEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDIN 699
M+ + ++ED+ KL KER EE ++ + + E ++ K K ES+ E ++
Sbjct: 989 MEDDILIMEDQNNKLTKERKLLEERVSDLTTNLAEEEEKAKNLTKLKNKHESMISELEVR 1048
Query: 700 TALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLK 759
L K ++ + +++ K +E ++ ++ H E A+I EL+ L
Sbjct: 1049 --LKK--EEKSRQELEKIKRKLEGES------------SDLHEQIAELQAQIAELKAQLA 1092
Query: 760 QHEKLALQASL-HYED-------CKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMP 811
+ E+ LQA+L ED K++ H+SD + ES + EK+ ++
Sbjct: 1093 KKEE-ELQAALARLEDETSQKNNALKKIRELESHISDLQEDLESEKAARNKAEKQKRDLS 1151
Query: 812 TTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELK-RFLAEI 870
+E L+ ++D + + L QE +R +E+ + EA +E++ + +
Sbjct: 1152 EELEALKTELEDTLDTTATQQELRAKREQEVTVLKRALEEETRTHEAQVQEMRQKHTQAV 1211
Query: 871 DALKEKWLPTLRNLVAQINETFSRNFQEMA-VAGEV-SLDEHESDFDKFGILIKVKFRQS 928
+ L E+ L + A +++T ++ A +A E+ SL + + D + K K +
Sbjct: 1212 EELTEQ-LEQFKRAKANLDKTKQTLEKDNADLANEIRSLSQAKQDVEH-----KKK-KLE 1264
Query: 929 GQLEVLSAHHQSGGER 944
QL+ L + + S GER
Sbjct: 1265 VQLQDLQSKY-SDGER 1279
Score = 68 (29.0 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 18/54 (33%), Positives = 31/54 (57%)
Query: 371 EKLGSQILELGVQANQKRL--QKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKL 422
+K+ Q+L+L Q ++ QK + EK+ K+ ++ D + MED+NNKL
Sbjct: 952 KKMQQQMLDLEEQLEEEEAARQKLQLEKVTADGKI--KKMEDDILIMEDQNNKL 1003
Score = 64 (27.6 bits), Expect = 7.6e-06, Sum P(2) = 7.6e-06
Identities = 54/292 (18%), Positives = 113/292 (38%)
Query: 186 LVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEK---DVERVRQRAE-----LLEKVESM 237
L E+ K K + ++ +++L+ ++EK ++E+++++ E L E++ +
Sbjct: 1021 LAEEEEKAKNLTKLKNKHESMISELEVRLKKEEKSRQELEKIKRKLEGESSDLHEQIAEL 1080
Query: 238 KKKLPWLKYDMKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKK 297
+ ++ LK + K E N L K I + + L D +
Sbjct: 1081 QAQIAELKAQLAKKEE-ELQAALARLEDETSQKNNAL----KKIRELESHISDLQEDLES 1135
Query: 298 LSSLINENSKRRMDFLEKVDQ-GVQVQGKYKXXXXXXXXXXXXXX--XILKARXXXXXXX 354
+ N+ K++ D E+++ +++ +LK
Sbjct: 1136 EKAARNKAEKQKRDLSEELEALKTELEDTLDTTATQQELRAKREQEVTVLKRALEEETRT 1195
Query: 355 XXXQTVPAYEPPHDKIEKLGSQILELG-VQAN-QKRLQKSEKEKILNQNKLTLRQCSDRL 412
Q + +E+L Q+ + +AN K Q EK+ N++ R S
Sbjct: 1196 HEAQVQEMRQKHTQAVEELTEQLEQFKRAKANLDKTKQTLEKDNADLANEI--RSLSQAK 1253
Query: 413 KDMEDKNNKLLHALRNSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSN 464
+D+E K KL L +++ Y ++ R ELN++ + L++ V N
Sbjct: 1254 QDVEHKKKKLEVQL-----QDLQSKYSDGERVRTELNEKVHK---LQIEVEN 1297
Score = 54 (24.1 bits), Expect = 8.0e-05, Sum P(2) = 8.0e-05
Identities = 56/303 (18%), Positives = 112/303 (36%)
Query: 169 ETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRA 228
E + V Q+ V++ + ++ K I+ T ++ TL L QE E RQ+
Sbjct: 1283 ELNEKVHKLQIEVENVTSLLNEAESKNIKLT--KDVATLGS--QLQDTQELLQEETRQKL 1338
Query: 229 EL---LEKVESMKKKLP-WLKYDMKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGK 284
+ L ++E K L L +++ + + L EF+ +E
Sbjct: 1339 NVTTKLRQLEDDKNSLQEQLDEEVEAKQNLERHISTLTIQLSDSK--KKLQEFTATVETM 1396
Query: 285 KQEKAILDGDCKKLSSLINENSKRRMDFLEKVDQGVQVQGKYKXXXXXXXXXXXXXXXIL 344
++ K L + + L+ E + D LEK ++Q + +
Sbjct: 1397 EEGKKKLQREIESLTQQFEEKAAS-YDKLEKTKN--RLQQELDDLVVDLDNQRQLVSNLE 1453
Query: 345 KARXXXXXXXXXXQTVPA-YEPPHDKIEKLGSQILELGVQANQKRLQKS--EKEKILNQN 401
K + + + + Y D+ E + E + + L+++ KE++ N
Sbjct: 1454 KKQKKFDQMLAEEKNISSKYADERDRAEAEARE-KETKALSLARALEEALEAKEELERTN 1512
Query: 402 KLTLRQCSDRLKDMED--KNNKLLHALRNSGAENIFEAYCWLQQHRHELNKEAYGPVLLE 459
K+ + D + +D KN L + + + + E L++ EL + LE
Sbjct: 1513 KMLKAEMEDLVSSKDDVGKNVHELEKSKRTLEQQVEEMKTQLEELEDELQAAEDAKLRLE 1572
Query: 460 VNV 462
VN+
Sbjct: 1573 VNM 1575
Score = 53 (23.7 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 43/179 (24%), Positives = 72/179 (40%)
Query: 77 ATSIGAYVKRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEIT 136
AT KR +E +K +L +T+ + + R K V E LE
Sbjct: 1169 ATQQELRAKREQEVTVLKRALEEETRTHEAQVQ---EMRQKH----TQAVEELTEQLEQF 1221
Query: 137 KRFNIQVNNLTQFLPQDRVC---EFAKLSPVKLLEETEKAVGDPQLP-VQ------HCAL 186
KR ++ Q L +D E LS K E +K + QL +Q
Sbjct: 1222 KRAKANLDKTKQTLEKDNADLANEIRSLSQAKQDVEHKKKKLEVQLQDLQSKYSDGERVR 1281
Query: 187 VEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDV----ERVRQRAELLEKVESMKKKL 241
E + K+ ++ V+ LN+ ++ N++ KDV +++ ELL+ E ++KL
Sbjct: 1282 TELNEKVHKLQIEVENVTSLLNEAESKNIKLTKDVATLGSQLQDTQELLQ--EETRQKL 1338
Score = 49 (22.3 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 21/85 (24%), Positives = 45/85 (52%)
Query: 367 HDKIEKLGSQILELGVQ-ANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHA 425
H K +KL Q+ +L + ++ +R++ EK+ ++ ++ + + L + E KN KL
Sbjct: 1258 HKK-KKLEVQLQDLQSKYSDGERVRTELNEKV-HKLQIEVENVTSLLNEAESKNIKLTKD 1315
Query: 426 LRNSGAENIFEAYCWLQQH-RHELN 449
+ G++ + + LQ+ R +LN
Sbjct: 1316 VATLGSQ-LQDTQELLQEETRQKLN 1339
Score = 49 (22.3 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 45/205 (21%), Positives = 75/205 (36%)
Query: 209 QLKALNVEQEKDVERVRQRAEL-LEKVESMKKKL---PWLKYDMKKAE---YIXXXXXXX 261
+++A + E ++ ER +Q+AE L+++E +L L + +AE Y
Sbjct: 859 EMQAKDEELQRTKER-QQKAEAELKELEQKHTQLCEEKNLLQEKLQAETELYAEAEEMRV 917
Query: 262 XXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSL---INENSKRRMDFLEKVD- 317
LHE IE +++ L + KK+ + E + +K+
Sbjct: 918 RLAAKKQELEEILHEMEARIEEEEERSQQLQAEKKKMQQQMLDLEEQLEEEEAARQKLQL 977
Query: 318 QGVQVQGKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPAYEPPHDK-IEKLG-- 374
+ V GK K + K R T A E K + KL
Sbjct: 978 EKVTADGKIKKMEDDILIMEDQNNKLTKERKLLEERVSDLTTNLAEEEEKAKNLTKLKNK 1037
Query: 375 --SQILELGVQANQKRLQKSEKEKI 397
S I EL V+ ++ + E EKI
Sbjct: 1038 HESMISELEVRLKKEEKSRQELEKI 1062
Score = 49 (22.3 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 44/228 (19%), Positives = 75/228 (32%)
Query: 201 KRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAEYIXXXXXX 260
K+ D +L+AL E E ++ + EL K E L + +
Sbjct: 1145 KQKRDLSEELEALKTELEDTLDTTATQQELRAKREQEVTVLKRALEEETRTHEAQVQEMR 1204
Query: 261 XXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENSKRRMDFLEKVDQ-G 319
L +F + + K L+ D L++ I S+ + D K +
Sbjct: 1205 QKHTQAVEELTEQLEQFKRAKANLDKTKQTLEKDNADLANEIRSLSQAKQDVEHKKKKLE 1264
Query: 320 VQVQGKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPAYEPPHDK-IEKLGSQIL 378
VQ+Q + K + + K + LGSQ+
Sbjct: 1265 VQLQDLQSKYSDGERVRTELNEKVHKLQIEVENVTSLLNEAESKNIKLTKDVATLGSQL- 1323
Query: 379 ELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHAL 426
Q Q+ LQ+ ++K+ N T +L+ +ED N L L
Sbjct: 1324 ----QDTQELLQEETRQKL---NVTT------KLRQLEDDKNSLQEQL 1358
Score = 44 (20.5 bits), Expect = 0.00083, Sum P(2) = 0.00083
Identities = 17/67 (25%), Positives = 30/67 (44%)
Query: 389 LQKSEKEKILNQNKLTLRQCSDRLKDM--EDKNNKLLHALRNSGAENIFEAYCWLQQH-- 444
+ + + K+ + KL + SD ++ E++ K L L+N I E L++
Sbjct: 995 IMEDQNNKLTKERKLLEERVSDLTTNLAEEEEKAKNLTKLKNKHESMISELEVRLKKEEK 1054
Query: 445 -RHELNK 450
R EL K
Sbjct: 1055 SRQELEK 1061
>UNIPROTKB|P10587 [details] [associations]
symbol:MYH11 "Myosin-11" species:9031 "Gallus gallus"
[GO:0003779 "actin binding" evidence=IEA] [GO:0005516 "calmodulin
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0032982 "myosin filament" evidence=IEA] [GO:0008307 "structural
constituent of muscle" evidence=ISS] [GO:0048251 "elastic fiber
assembly" evidence=ISS] [GO:0048739 "cardiac muscle fiber
development" evidence=ISS] [GO:0030241 "skeletal muscle myosin
thick filament assembly" evidence=ISS] [GO:0030016 "myofibril"
evidence=IEA] [GO:0001725 "stress fiber" evidence=IEA] [GO:0003774
"motor activity" evidence=IEA] [GO:0005859 "muscle myosin complex"
evidence=IEA] [GO:0030485 "smooth muscle contractile fiber"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006939 "smooth muscle contraction" evidence=ISS]
InterPro:IPR000048 InterPro:IPR001609 InterPro:IPR002928
InterPro:IPR004009 Pfam:PF00063 Pfam:PF01576 Pfam:PF02736
PRINTS:PR00193 PROSITE:PS50096 SMART:SM00015 SMART:SM00242
GO:GO:0005524 GO:GO:0030016 GO:GO:0006939 GO:GO:0001725
GO:GO:0030485 GO:GO:0008307 Reactome:REACT_115433 GO:GO:0003774
eggNOG:COG5022 GO:GO:0048251 GO:GO:0030241 GO:GO:0048739
GO:GO:0005859 PDB:3J04 PDBsum:3J04 PDB:1I84 PDBsum:1I84
GO:GO:0032982 GeneTree:ENSGT00650000092896 HOGENOM:HOG000173958
HOVERGEN:HBG004704 KO:K10352 OrthoDB:EOG4TXBR1 EMBL:X06546
IPI:IPI00601453 PIR:S03166 RefSeq:NP_990605.1 UniGene:Gga.3225
PDB:1BR1 PDB:1BR2 PDB:1BR4 PDB:3DTP PDBsum:1BR1 PDBsum:1BR2
PDBsum:1BR4 PDBsum:3DTP DisProt:DP00102 ProteinModelPortal:P10587
SMR:P10587 IntAct:P10587 STRING:P10587 PRIDE:P10587
Ensembl:ENSGALT00000033605 GeneID:396211 KEGG:gga:396211 CTD:4629
InParanoid:P10587 OMA:QYEEKAA EvolutionaryTrace:P10587
NextBio:20816263 Uniprot:P10587
Length = 1979
Score = 138 (53.6 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 65/275 (23%), Positives = 124/275 (45%)
Query: 643 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLE----SIEKE-DD 697
+Q E++ +L K+ E ++ ++RK+R + K+KLE +E + D
Sbjct: 1586 LQARDEQNEEKRRQLLKQLHEHETELE-DERKQRALAA---AAKKKLEVDVKDLESQVDS 1641
Query: 698 INTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFN 757
N A + + Q L Q Y ++ + + E + +A++ +L+ +
Sbjct: 1642 ANKAREEAIKQLRKLQAQMKDYQRDLDDARAAREEIFATARENEKKAKNLEAELIQLQED 1701
Query: 758 LKQHEKLALQASLHYEDCKKEVEHC---RKHLSDAKRQAES-IAFITPELEKEFLEMPTT 813
L E+ QA L E+ +E+ R L D KR+ E+ IA + EL++E + T
Sbjct: 1702 LAAAERARKQADLEKEEMAEELASANSGRTSLQDEKRRLEARIAQLEEELDEEHSNIETM 1761
Query: 814 IEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEID-A 872
+ + A+Q Q N+ + Q+ E+ ++Q+E +Q KEL+ L E++ A
Sbjct: 1762 SDRMRKAVQQ-AEQLNNELATERATAQKNENARQQLE----RQN---KELRSKLQEMEGA 1813
Query: 873 LKEKWLPTLRNL---VAQINETFSRNFQEMAVAGE 904
+K K+ T+ L +A + E + +E A +
Sbjct: 1814 VKSKFKSTIAALEAKIASLEEQLEQEAREKQAAAK 1848
Score = 132 (51.5 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 67/289 (23%), Positives = 135/289 (46%)
Query: 644 QTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREM--ENHINLRKRKLESIEKEDDINTA 701
+ E RL ++E K ++E E+I ++ E E E + + K + +KE+++ A
Sbjct: 1044 ELEVRLKKEE--KSRQELEKIKRKLEGESSDLHEQIAELQAQIAELKAQLAKKEEELQAA 1101
Query: 702 LAKLVDQAADLN--IQQFK-YAIEIKNLLVEIVSCKWSY--AEKHMASI--EFDAKIREL 754
LA+L D+ + N +++ + I +L ++ S K + AEK + E +A EL
Sbjct: 1102 LARLEDETSQKNNALKKIRELESHISDLQEDLESEKAARNKAEKQKRDLSEELEALKTEL 1161
Query: 755 EFNLKQ---HEKLALQASLHYEDCKKEVEH-CRKHLSDAK--RQ--AESIAFITPELEKE 806
E L ++L + K+ +E R H + + RQ +++ +T +LE +
Sbjct: 1162 EDTLDTTATQQELRAKREQEVTVLKRALEEETRTHEAQVQEMRQKHTQAVEELTEQLE-Q 1220
Query: 807 FLEMPTTIEELEAAIQ-DNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKR 865
F +++ + ++ DN AN I L+Q Q+ EH+++++E ++ + +R
Sbjct: 1221 FKRAKANLDKTKQTLEKDNADLANEIRSLSQ-AKQDVEHKKKKLEVQLQDLQSKYSDGER 1279
Query: 866 FLAEIDALKEKWLPTLRNLVAQINETFSRNFQ---EMAVAGEVSLDEHE 911
E++ K + N+ + +NE S+N + ++A G D E
Sbjct: 1280 VRTELNEKVHKLQIEVENVTSLLNEAESKNIKLTKDVATLGSQLQDTQE 1328
Score = 125 (49.1 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 73/316 (23%), Positives = 143/316 (45%)
Query: 643 MQTEQRLIEDEAAKLQKER---EEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDIN 699
M+ + ++ED+ KL KER EE ++ + + E ++ K K ES+ E ++
Sbjct: 989 MEDDILIMEDQNNKLTKERKLLEERVSDLTTNLAEEEEKAKNLTKLKNKHESMISELEVR 1048
Query: 700 TALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLK 759
L K ++ + +++ K +E ++ ++ H E A+I EL+ L
Sbjct: 1049 --LKK--EEKSRQELEKIKRKLEGES------------SDLHEQIAELQAQIAELKAQLA 1092
Query: 760 QHEKLALQASL-HYED-------CKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMP 811
+ E+ LQA+L ED K++ H+SD + ES + EK+ ++
Sbjct: 1093 KKEE-ELQAALARLEDETSQKNNALKKIRELESHISDLQEDLESEKAARNKAEKQKRDLS 1151
Query: 812 TTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELK-RFLAEI 870
+E L+ ++D + + L QE +R +E+ + EA +E++ + +
Sbjct: 1152 EELEALKTELEDTLDTTATQQELRAKREQEVTVLKRALEEETRTHEAQVQEMRQKHTQAV 1211
Query: 871 DALKEKWLPTLRNLVAQINETFSRNFQEMA-VAGEV-SLDEHESDFDKFGILIKVKFRQS 928
+ L E+ L + A +++T ++ A +A E+ SL + + D + K K +
Sbjct: 1212 EELTEQ-LEQFKRAKANLDKTKQTLEKDNADLANEIRSLSQAKQDVEH-----KKK-KLE 1264
Query: 929 GQLEVLSAHHQSGGER 944
QL+ L + + S GER
Sbjct: 1265 VQLQDLQSKY-SDGER 1279
Score = 68 (29.0 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 18/54 (33%), Positives = 31/54 (57%)
Query: 371 EKLGSQILELGVQANQKRL--QKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKL 422
+K+ Q+L+L Q ++ QK + EK+ K+ ++ D + MED+NNKL
Sbjct: 952 KKMQQQMLDLEEQLEEEEAARQKLQLEKVTADGKI--KKMEDDILIMEDQNNKL 1003
Score = 64 (27.6 bits), Expect = 7.6e-06, Sum P(2) = 7.6e-06
Identities = 54/292 (18%), Positives = 113/292 (38%)
Query: 186 LVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEK---DVERVRQRAE-----LLEKVESM 237
L E+ K K + ++ +++L+ ++EK ++E+++++ E L E++ +
Sbjct: 1021 LAEEEEKAKNLTKLKNKHESMISELEVRLKKEEKSRQELEKIKRKLEGESSDLHEQIAEL 1080
Query: 238 KKKLPWLKYDMKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKK 297
+ ++ LK + K E N L K I + + L D +
Sbjct: 1081 QAQIAELKAQLAKKEE-ELQAALARLEDETSQKNNAL----KKIRELESHISDLQEDLES 1135
Query: 298 LSSLINENSKRRMDFLEKVDQ-GVQVQGKYKXXXXXXXXXXXXXX--XILKARXXXXXXX 354
+ N+ K++ D E+++ +++ +LK
Sbjct: 1136 EKAARNKAEKQKRDLSEELEALKTELEDTLDTTATQQELRAKREQEVTVLKRALEEETRT 1195
Query: 355 XXXQTVPAYEPPHDKIEKLGSQILELG-VQAN-QKRLQKSEKEKILNQNKLTLRQCSDRL 412
Q + +E+L Q+ + +AN K Q EK+ N++ R S
Sbjct: 1196 HEAQVQEMRQKHTQAVEELTEQLEQFKRAKANLDKTKQTLEKDNADLANEI--RSLSQAK 1253
Query: 413 KDMEDKNNKLLHALRNSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSN 464
+D+E K KL L +++ Y ++ R ELN++ + L++ V N
Sbjct: 1254 QDVEHKKKKLEVQL-----QDLQSKYSDGERVRTELNEKVHK---LQIEVEN 1297
Score = 54 (24.1 bits), Expect = 8.0e-05, Sum P(2) = 8.0e-05
Identities = 56/303 (18%), Positives = 112/303 (36%)
Query: 169 ETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRA 228
E + V Q+ V++ + ++ K I+ T ++ TL L QE E RQ+
Sbjct: 1283 ELNEKVHKLQIEVENVTSLLNEAESKNIKLT--KDVATLGS--QLQDTQELLQEETRQKL 1338
Query: 229 EL---LEKVESMKKKLP-WLKYDMKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGK 284
+ L ++E K L L +++ + + L EF+ +E
Sbjct: 1339 NVTTKLRQLEDDKNSLQEQLDEEVEAKQNLERHISTLTIQLSDSK--KKLQEFTATVETM 1396
Query: 285 KQEKAILDGDCKKLSSLINENSKRRMDFLEKVDQGVQVQGKYKXXXXXXXXXXXXXXXIL 344
++ K L + + L+ E + D LEK ++Q + +
Sbjct: 1397 EEGKKKLQREIESLTQQFEEKAAS-YDKLEKTKN--RLQQELDDLVVDLDNQRQLVSNLE 1453
Query: 345 KARXXXXXXXXXXQTVPA-YEPPHDKIEKLGSQILELGVQANQKRLQKS--EKEKILNQN 401
K + + + + Y D+ E + E + + L+++ KE++ N
Sbjct: 1454 KKQKKFDQMLAEEKNISSKYADERDRAEAEARE-KETKALSLARALEEALEAKEELERTN 1512
Query: 402 KLTLRQCSDRLKDMED--KNNKLLHALRNSGAENIFEAYCWLQQHRHELNKEAYGPVLLE 459
K+ + D + +D KN L + + + + E L++ EL + LE
Sbjct: 1513 KMLKAEMEDLVSSKDDVGKNVHELEKSKRTLEQQVEEMKTQLEELEDELQAAEDAKLRLE 1572
Query: 460 VNV 462
VN+
Sbjct: 1573 VNM 1575
Score = 53 (23.7 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 43/179 (24%), Positives = 72/179 (40%)
Query: 77 ATSIGAYVKRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEIT 136
AT KR +E +K +L +T+ + + R K V E LE
Sbjct: 1169 ATQQELRAKREQEVTVLKRALEEETRTHEAQVQ---EMRQKH----TQAVEELTEQLEQF 1221
Query: 137 KRFNIQVNNLTQFLPQDRVC---EFAKLSPVKLLEETEKAVGDPQLP-VQ------HCAL 186
KR ++ Q L +D E LS K E +K + QL +Q
Sbjct: 1222 KRAKANLDKTKQTLEKDNADLANEIRSLSQAKQDVEHKKKKLEVQLQDLQSKYSDGERVR 1281
Query: 187 VEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDV----ERVRQRAELLEKVESMKKKL 241
E + K+ ++ V+ LN+ ++ N++ KDV +++ ELL+ E ++KL
Sbjct: 1282 TELNEKVHKLQIEVENVTSLLNEAESKNIKLTKDVATLGSQLQDTQELLQ--EETRQKL 1338
Score = 49 (22.3 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 21/85 (24%), Positives = 45/85 (52%)
Query: 367 HDKIEKLGSQILELGVQ-ANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHA 425
H K +KL Q+ +L + ++ +R++ EK+ ++ ++ + + L + E KN KL
Sbjct: 1258 HKK-KKLEVQLQDLQSKYSDGERVRTELNEKV-HKLQIEVENVTSLLNEAESKNIKLTKD 1315
Query: 426 LRNSGAENIFEAYCWLQQH-RHELN 449
+ G++ + + LQ+ R +LN
Sbjct: 1316 VATLGSQ-LQDTQELLQEETRQKLN 1339
Score = 49 (22.3 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 45/205 (21%), Positives = 75/205 (36%)
Query: 209 QLKALNVEQEKDVERVRQRAEL-LEKVESMKKKL---PWLKYDMKKAE---YIXXXXXXX 261
+++A + E ++ ER +Q+AE L+++E +L L + +AE Y
Sbjct: 859 EMQAKDEELQRTKER-QQKAEAELKELEQKHTQLCEEKNLLQEKLQAETELYAEAEEMRV 917
Query: 262 XXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSL---INENSKRRMDFLEKVD- 317
LHE IE +++ L + KK+ + E + +K+
Sbjct: 918 RLAAKKQELEEILHEMEARIEEEEERSQQLQAEKKKMQQQMLDLEEQLEEEEAARQKLQL 977
Query: 318 QGVQVQGKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPAYEPPHDK-IEKLG-- 374
+ V GK K + K R T A E K + KL
Sbjct: 978 EKVTADGKIKKMEDDILIMEDQNNKLTKERKLLEERVSDLTTNLAEEEEKAKNLTKLKNK 1037
Query: 375 --SQILELGVQANQKRLQKSEKEKI 397
S I EL V+ ++ + E EKI
Sbjct: 1038 HESMISELEVRLKKEEKSRQELEKI 1062
Score = 49 (22.3 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 44/228 (19%), Positives = 75/228 (32%)
Query: 201 KRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAEYIXXXXXX 260
K+ D +L+AL E E ++ + EL K E L + +
Sbjct: 1145 KQKRDLSEELEALKTELEDTLDTTATQQELRAKREQEVTVLKRALEEETRTHEAQVQEMR 1204
Query: 261 XXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENSKRRMDFLEKVDQ-G 319
L +F + + K L+ D L++ I S+ + D K +
Sbjct: 1205 QKHTQAVEELTEQLEQFKRAKANLDKTKQTLEKDNADLANEIRSLSQAKQDVEHKKKKLE 1264
Query: 320 VQVQGKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPAYEPPHDK-IEKLGSQIL 378
VQ+Q + K + + K + LGSQ+
Sbjct: 1265 VQLQDLQSKYSDGERVRTELNEKVHKLQIEVENVTSLLNEAESKNIKLTKDVATLGSQL- 1323
Query: 379 ELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHAL 426
Q Q+ LQ+ ++K+ N T +L+ +ED N L L
Sbjct: 1324 ----QDTQELLQEETRQKL---NVTT------KLRQLEDDKNSLQEQL 1358
Score = 44 (20.5 bits), Expect = 0.00083, Sum P(2) = 0.00083
Identities = 17/67 (25%), Positives = 30/67 (44%)
Query: 389 LQKSEKEKILNQNKLTLRQCSDRLKDM--EDKNNKLLHALRNSGAENIFEAYCWLQQH-- 444
+ + + K+ + KL + SD ++ E++ K L L+N I E L++
Sbjct: 995 IMEDQNNKLTKERKLLEERVSDLTTNLAEEEEKAKNLTKLKNKHESMISELEVRLKKEEK 1054
Query: 445 -RHELNK 450
R EL K
Sbjct: 1055 SRQELEK 1061
>UNIPROTKB|F1NPB7 [details] [associations]
symbol:LOC429272 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003774 "motor activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016459 "myosin
complex" evidence=IEA] InterPro:IPR000048 InterPro:IPR001609
InterPro:IPR002928 Pfam:PF00063 Pfam:PF01576 PRINTS:PR00193
PROSITE:PS50096 SMART:SM00015 SMART:SM00242 GO:GO:0005524
GO:GO:0005634 GO:GO:0030018 GO:GO:0005925 GO:GO:0001725
GO:GO:0008307 GO:GO:0002027 GO:GO:0003774 GO:GO:0030898
GO:GO:0032982 GeneTree:ENSGT00680000099788 EMBL:AADN02026141
EMBL:AADN02026142 EMBL:AADN02026143 IPI:IPI00818026
Ensembl:ENSGALT00000040718 OMA:MVVRINN ArrayExpress:F1NPB7
Uniprot:F1NPB7
Length = 1942
Score = 160 (61.4 bits), Expect = 3.2e-06, Sum P(3) = 3.2e-06
Identities = 68/296 (22%), Positives = 140/296 (47%)
Query: 643 MQTEQRLIEDEAAKLQKEREEI-INIVQIEKRKRREMENHINLRKRKLESIEKEDDINTA 701
+ ++R +EDE ++L+K+ +++ +++ ++EK K EN + ++ +++ T
Sbjct: 942 LAAKKRKLEDECSELKKDIDDLELSLAKVEKEKHAT-ENKVKNLTEEMAGLDENITKLTK 1000
Query: 702 LAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIR-ELEFNLKQ 760
K++ ++ + + + N L + A+ +S+E + KIR +LE ++
Sbjct: 1001 EKKILQESHQQALDDLQAEEDKVNTLAKAKVKLEQQADDLESSLEQEKKIRMDLERAKRK 1060
Query: 761 HE---KLALQASLHYEDCKKEVEHCRK----HLSDAKRQAESIAFITPELEKEFLEMPTT 813
E KLA ++ + E+ K+++E K L+ + E I+ +L+K+ E+
Sbjct: 1061 LEGDLKLAQESIMDLENDKQQLEERLKKKDFELNTLNARIEDEQAISAQLQKKLKELQAR 1120
Query: 814 IEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIED----------LSTKQEADKKEL 863
IEELE ++ + + L +LQE E ++E+ L+ K+EA+ ++L
Sbjct: 1121 IEELEEELEAERTGRAKVEKLRSELLQELEETSERLEEAGGATSVQLELNKKREAEFQKL 1180
Query: 864 KRFLAEIDALKEKWLPTLR----NLVAQINETFSRNFQEMAVAGEVSLDEHESDFD 915
+R L E E TLR + VA+++E N Q + E E + + D
Sbjct: 1181 RRDLEEATLQHEATAATLRKKHADSVAELSEQLD-NLQRVKQKLEKEKSELKLELD 1235
Score = 125 (49.1 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 66/269 (24%), Positives = 117/269 (43%)
Query: 648 RLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTAL-AKLV 706
R ED+ + + + EE V +R +++ + R+LE EKE IN KL
Sbjct: 1256 RTTEDQMNEHRSKLEEAQRTVTDLSTQRAKLQTENSELSRQLE--EKEAFINQLTRGKLT 1313
Query: 707 --DQAADLNIQQFKYAIEIKNLLVEIVS-----C---KWSYAEKHMASIEFDAKIRELEF 756
Q DL +Q + + KN L + C + Y E+ A E + +
Sbjct: 1314 YTQQLEDLK-RQLEEEAKAKNALAHALQSAQHDCDLLREQYEEEMEAKAELQRALSKANS 1372
Query: 757 NLKQ----HEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPT 812
+ Q +E A+Q + E+ KK++ + L +A+ E++ LEK +
Sbjct: 1373 EVAQWRTKYETDAIQRTEELEEAKKKLA---QRLQEAEEAVEAVNAKCSSLEKTKHRLQN 1429
Query: 813 TIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDA 872
IE+L A ++ + + A ++ +N + +++ E+ T+ EA +KE + E+
Sbjct: 1430 EIEDLMADVERSNAAAAALDKKQRNFDKILSEWKQKFEESQTELEASQKEARSLSTELFK 1489
Query: 873 LKEKWLPTLRNLVAQINETFSR---NFQE 898
LK + +L +L ETF R N QE
Sbjct: 1490 LKNAYEESLEHL-----ETFKRENKNLQE 1513
Score = 120 (47.3 bits), Expect = 0.00087, Sum P(2) = 0.00087
Identities = 65/279 (23%), Positives = 117/279 (41%)
Query: 668 VQIEKRKRREMENHINLRKRKLE--SIEKEDDINTALAKLVDQAADL-----NIQQFKYA 720
VQ+E K+RE E LR R LE +++ E T K D A+L N+Q+ K
Sbjct: 1165 VQLELNKKREAEFQ-KLR-RDLEEATLQHEATAATLRKKHADSVAELSEQLDNLQRVKQK 1222
Query: 721 IEIKN--LLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYEDCKKE 778
+E + L +E+ + + A + R E + +H +A D +
Sbjct: 1223 LEKEKSELKLELDDVNSNTEQLIKAKTNLEKMCRTTEDQMNEHRSKLEEAQRTVTDLSTQ 1282
Query: 779 VEHCRKHLSDAKRQAESI-AFITPELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQN 837
+ S+ RQ E AFI +L + L +E+L+ +++ N++ Q+
Sbjct: 1283 RAKLQTENSELSRQLEEKEAFIN-QLTRGKLTYTQQLEDLKRQLEEEAKAKNALAHALQS 1341
Query: 838 ILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQ 897
+ + + Q E+ + EA K EL+R L++ ++ +W Q E +
Sbjct: 1342 AQHDCDLLREQYEE---EMEA-KAELQRALSKANSEVAQWRTKYETDAIQRTEELEEAKK 1397
Query: 898 EMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVLSA 936
++A + + + E+ K L K K R ++E L A
Sbjct: 1398 KLAQRLQEAEEAVEAVNAKCSSLEKTKHRLQNEIEDLMA 1436
Score = 62 (26.9 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 51/253 (20%), Positives = 108/253 (42%)
Query: 165 KLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECT-VKRNGDTLNQLKALNVEQEKDVER 223
K+ E TE+ + ++ + L K KL+ EC+ +K++ D L +L VE+EK
Sbjct: 924 KVKEMTERLEEEEEMNAE---LAAKKRKLED-ECSELKKDIDDL-ELSLAKVEKEKHATE 978
Query: 224 VRQRAELLEKVESMKKKLPWLKYDMKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEG 283
+ + L E++ + + + L + K + NTL + +E
Sbjct: 979 NKVK-NLTEEMAGLDENITKLTKEKKILQ--ESHQQALDDLQAEEDKVNTLAKAKVKLEQ 1035
Query: 284 KKQE-KAILDGDCKKLSSLINENSKRRMDF-LEKVDQGVQVQGKYKXXXXXXXXXXXXXX 341
+ + ++ L+ + KK+ + E +KR+++ L+ + + K
Sbjct: 1036 QADDLESSLEQE-KKIRMDL-ERAKRKLEGDLKLAQESIMDLENDKQQLEERLKKKDFEL 1093
Query: 342 XILKARXXXXXXXXXXQTVPAYEPPHDKIEKLGSQILELGVQANQKRLQKSEKEKILNQN 401
L AR Q + A K+++L ++I EL + +R +++ EK+ ++
Sbjct: 1094 NTLNARIEDE------QAISAQL--QKKLKELQARIEELEEELEAERTGRAKVEKLRSEL 1145
Query: 402 KLTLRQCSDRLKD 414
L + S+RL++
Sbjct: 1146 LQELEETSERLEE 1158
Score = 55 (24.4 bits), Expect = 3.2e-06, Sum P(3) = 3.2e-06
Identities = 17/50 (34%), Positives = 30/50 (60%)
Query: 378 LELGVQANQKRLQKSEKE-KILNQNKLTL----RQCSDRLKDMEDKNNKL 422
L+L VQA Q L +E+ L +NK+ L ++ ++RL++ E+ N +L
Sbjct: 893 LQLQVQAEQDNLADAEERCDQLIKNKIQLEAKVKEMTERLEEEEEMNAEL 942
Score = 39 (18.8 bits), Expect = 3.2e-06, Sum P(3) = 3.2e-06
Identities = 8/32 (25%), Positives = 22/32 (68%)
Query: 221 VERVRQRAELLEKVESMKKKLPWLKYDMKKAE 252
++ + + AE +++++MK++ LK ++K+E
Sbjct: 842 IKPLLKSAETEKEMQTMKEEFGHLKEALEKSE 873
>UNIPROTKB|E1BKZ5 [details] [associations]
symbol:GOLGB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005793
"endoplasmic reticulum-Golgi intermediate compartment"
evidence=IEA] InterPro:IPR026202 GO:GO:0005794 GO:GO:0005793
GeneTree:ENSGT00700000104188 PANTHER:PTHR18887 EMBL:DAAA02001585
IPI:IPI00711781 Ensembl:ENSBTAT00000011669 OMA:RPEYSEP
Uniprot:E1BKZ5
Length = 3273
Score = 133 (51.9 bits), Expect = 3.8e-06, Sum P(3) = 3.8e-06
Identities = 64/311 (20%), Positives = 145/311 (46%)
Query: 650 IEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQA 709
+E+ + L ++ EI + Q+ K++++E + ++ +E EK+ + + ++
Sbjct: 869 VEELSQALSQKELEIAKMDQLLLEKKKDVE----ILQQTIE--EKDQQVTELSFSMTEKM 922
Query: 710 ADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQ-HEKLALQA 768
LN ++F +EIK L E ++ E +E D +E+ ++KQ +++L+
Sbjct: 923 VQLNEEKFSLGVEIKTLK-EQLNLLSRAEETKKEQMEED---KEIVSSIKQNYDELSPAG 978
Query: 769 SLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQA 828
+ E+ ++E++ +K KR+ ++ A I KE L+ + +EE A ++D S+
Sbjct: 979 LISKEELQRELDLVKKESEQRKRKLQA-ALIN---RKELLQKVSRLEEELAKVKDEPSKE 1034
Query: 829 NSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLVAQI 888
L+++ +E E + EDL + + +E++ L I + KE L +R +
Sbjct: 1035 ---ILLHESERREVEEDKESKEDLEKRVTSKCQEIEMSLKLIISEKEMELEHIRK---DL 1088
Query: 889 NETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVLSAHHQSGGE-RSVS 947
E + Q AV +++ + E ++ +L ++ L+ ++ G+ S +
Sbjct: 1089 EEKAAIEEQLQAVVKQMNQNLQEKT-NQIDLLQAEVVENQAIIQKLTTGNKDAGDGNSAA 1147
Query: 948 TILYLVSLQDL 958
+ V++ L
Sbjct: 1148 PVKEAVAISPL 1158
Score = 78 (32.5 bits), Expect = 3.8e-06, Sum P(3) = 3.8e-06
Identities = 48/215 (22%), Positives = 96/215 (44%)
Query: 368 DKIEKLGSQILELGVQANQKRLQKSEKEKILNQNK--LTLRQCSDRLKD----MEDKNNK 421
+++E+ G EL Q+ L++ ++ + L+LR+ L+ ++D+N+K
Sbjct: 351 EQLEQAGQAQAEL--QSRHSALEQKHNAEMEEKTSHILSLRKSEQELQSACDALKDQNSK 408
Query: 422 LLHALRNSGAEN--IFEAY--CWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLEDHVGH 477
LL A + + + LQQ E+N+ P LL+ ++++ + + H G
Sbjct: 409 LLQDKNEQAAHSAQVIQQLEVDQLQQKSEEINQFLNKPTLLKHEIASQTCSPDVS-HEG- 466
Query: 478 YIWKSFITQDAGDRDFLAKNLKPFD----VPILNYVSNESSRKEPFQISEEMRALGISAR 533
+T+++ FL K + + +LN V E + E ++S ++ L R
Sbjct: 467 ---TQAVTEES--IAFLQKRVVELENEKGALLLNSVELEELKAENEKLSSQITLLESQKR 521
Query: 534 LDQVFDAPHAVKEVLISQFGLDSSYIGSKETDQKA 568
+V H V V I++ L+ S ++E+ Q A
Sbjct: 522 TGEVDREVHEVSMVDITR--LNKSSFSAEESGQDA 554
Score = 54 (24.1 bits), Expect = 0.00087, Sum P(3) = 0.00087
Identities = 17/55 (30%), Positives = 30/55 (54%)
Query: 368 DKIEKLGSQILELGVQANQKR--LQKSEKEKILNQNKLTLRQCSDRLKDMEDKNN 420
D++E+L Q+LEL V ++ +K+ EK + LT + + K+ E+ NN
Sbjct: 692 DELERLKGQVLELEVNLHKAEEIYEKNLDEKAKEISMLT-QLIEEFKKNAENTNN 745
Score = 50 (22.7 bits), Expect = 3.8e-06, Sum P(3) = 3.8e-06
Identities = 36/157 (22%), Positives = 71/157 (45%)
Query: 97 LRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQFLPQDRVC 156
L GD +E++ + + +S+ FN + + +VLE V L + + Q +
Sbjct: 16 LSGDDTDENMRASLEPELPQESDMEFNDRT--QEDVLERLAYVEQLVVELKEIIRQ-KDA 72
Query: 157 EFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTL--------N 208
E + V L+E KA + ++ A + +S K IE +K G T+
Sbjct: 73 ELQQKDEV--LQEERKAADNKIKKLKLHAKAKLTSLNKHIE-EMKAQGGTVLSTEPQSEE 129
Query: 209 QLKA---LNVEQEKDVERVRQRAELLEK-VESMKKKL 241
QL + E+E +VE+++ + + E+ + S++ +L
Sbjct: 130 QLSKHDKSSTEEEIEVEKIKHKLQEKEELITSLQAQL 166
>UNIPROTKB|E1C1F2 [details] [associations]
symbol:TRIP11 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000042 "protein targeting to Golgi"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] InterPro:IPR000237 PROSITE:PS50913
GO:GO:0005634 GO:GO:0005794 GeneTree:ENSGT00700000104188
GO:GO:0000042 OMA:LESEVDH EMBL:AADN02003653 IPI:IPI00580771
Ensembl:ENSGALT00000017502 Uniprot:E1C1F2
Length = 1980
Score = 129 (50.5 bits), Expect = 4.2e-06, Sum P(3) = 4.2e-06
Identities = 50/263 (19%), Positives = 128/263 (48%)
Query: 646 EQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKE-DDINTALAK 704
E + ++++A Q+ER++++ ++ ++ + +++ I K + + +E + + L +
Sbjct: 1533 EVKSMQEKAVTFQQERDQVMVALKQKQMESSALQSEIQHLHEKEQRLNQELERLRNHLIE 1592
Query: 705 LVD----QAADLNIQQFKYAIEIKNLLVEIVSCKWSYAE-KHMASIEFDAKIRELEFNLK 759
+ D +A ++ K ++ L ++VS + H A+++ ++ +L K
Sbjct: 1593 MEDSYTREALAAEDRETKLRKKVSILEEKLVSSSTAVENASHQANLQVESLQEQLNLVSK 1652
Query: 760 QHEKLALQASLHYEDCKK-EVEHCRKHLSDAKRQAESIAFITPELEK------EFLEMPT 812
Q ++ LQ ++ + K+ + + + Q E A + ELEK E+ +
Sbjct: 1653 QRDETVLQLAISQDQVKQYALSLTNLQMVLEQFQQEEKAMYSAELEKHQKETAEWKKKAK 1712
Query: 813 TIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDA 872
+EE ++Q+N+ +AN+ + ++ + ++ QIE+L K+E E++R + E D
Sbjct: 1713 NLEEKVISLQENLEEANAALDAASRLTEQLDVKEEQIEEL--KKEG---EIRREMLE-D- 1765
Query: 873 LKEKWLPTLRNLVAQINETFSRN 895
++ K + + + ++++ RN
Sbjct: 1766 VQNKLMNLINSTEGKVDKLLMRN 1788
Score = 116 (45.9 bits), Expect = 8.8e-05, Sum P(3) = 8.8e-05
Identities = 57/247 (23%), Positives = 110/247 (44%)
Query: 644 QTEQRLIEDE---AAKLQKEREEIINIVQIEKRKRREM---ENHIN---LRKRKLESIEK 694
+ +QRL E E + L K E NI Q +++ E+ + L+K++LE+ +
Sbjct: 610 ELQQRLKEREEELSLSLSKSTE---NIKQESSHSSQDLILKESDVEIVELQKKQLENKQL 666
Query: 695 EDDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYA-EKHMASIEFDAKIRE 753
+D+ +L+ L + L + F+ E+K L + +S K EK + R
Sbjct: 667 NEDLEKSLSDLKTENGKL-MAAFE---ELKQELNDTISEKNKVCLEKDTVVEALKLEKRH 722
Query: 754 LEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEF--LEMP 811
LE L Q EK + + YE +E+ + R ++ Q E + EK+F E+
Sbjct: 723 LETELNQTEKRLFEQAQKYEQTIEELSNARS-MNTTALQLEHERLVKLNQEKDFKIAELK 781
Query: 812 TTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLA--- 868
++E++E Q+ + + + + + ++ IE L + K+EL+ ++
Sbjct: 782 RSMEQMEVDHQETKEMLTTSLGGQKQLTELLKEKEEFIEKLKNQASLVKQELEEYMEVSK 841
Query: 869 EIDALKE 875
+ D LK+
Sbjct: 842 KQDVLKQ 848
Score = 109 (43.4 bits), Expect = 0.00045, Sum P(3) = 0.00045
Identities = 62/277 (22%), Positives = 125/277 (45%)
Query: 651 EDEAAKLQKEREEII-NIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKL-VD- 707
E E + ERE +I + +++K+ + ++ I L K KL E D T K +D
Sbjct: 482 EHELNESIAERETLIAELEELDKQNQEATQHMITL-KEKLSKQHIETDSITKQLKFDIDV 540
Query: 708 ---QAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKL 764
+ A L +++ + E+ ++ C ++ + H++ + +R L+ LK+ +
Sbjct: 541 ERKKVAKLEMEKMETIKELDTQKEKLSQCSYALNDLHISKQQLQDNVRNLQEQLKKAQDC 600
Query: 765 ALQASLHYEDCKKEVEHCRKHLS-DAKRQAESIAFITPELEKEFL--EMPTTIEELEAAI 821
L + ++ ++ + LS + E+I + ++ + E I EL+
Sbjct: 601 NLHNKKEIRELQQRLKEREEELSLSLSKSTENIKQESSHSSQDLILKESDVEIVELQKKQ 660
Query: 822 QDNISQAN-----SIFFL---NQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDAL 873
+N Q N S+ L N ++ +E ++++ D T E +K L++ ++AL
Sbjct: 661 LEN-KQLNEDLEKSLSDLKTENGKLMAAFEELKQELND--TISEKNKVCLEKDTV-VEAL 716
Query: 874 K-EKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDE 909
K EK R+L ++N+T R F E A E +++E
Sbjct: 717 KLEK-----RHLETELNQTEKRLF-EQAQKYEQTIEE 747
Score = 79 (32.9 bits), Expect = 4.2e-06, Sum P(3) = 4.2e-06
Identities = 24/68 (35%), Positives = 38/68 (55%)
Query: 368 DKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDR--LKDMEDKNNKLLHA 425
++IE+L Q+ + GV A+ K +EK + QN L R+ D +KD+ED+ KL
Sbjct: 268 ERIEELEHQLQQDGVSADAMVDSKISEEKKITQN-LEGRKAEDLQIIKDLEDEIRKLNQK 326
Query: 426 LRNSGAEN 433
L ++ EN
Sbjct: 327 LSSAKEEN 334
Score = 72 (30.4 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 55/305 (18%), Positives = 126/305 (41%)
Query: 134 EITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLE-ETEKAVGDPQLPVQHC--ALVEKS 190
+++K+ +I+ +++T+ L D E K++ +++ + ET K + + + C AL +
Sbjct: 519 KLSKQ-HIETDSITKQLKFDIDVERKKVAKLEMEKMETIKELDTQKEKLSQCSYALNDLH 577
Query: 191 SKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRA-ELLEKVE-SMKKKLPWLKYDM 248
+ ++ V+ + L + + N+ +K++ ++QR E E++ S+ K +K +
Sbjct: 578 ISKQQLQDNVRNLQEQLKKAQDCNLHNKKEIRELQQRLKEREEELSLSLSKSTENIKQES 637
Query: 249 KKA--EYIXXXXXXXXXXXXXXXXXNT-LHE-FSKPIEGKKQEKAILDGDCKKLSSLINE 304
+ + I N L+E K + K E L ++L +N+
Sbjct: 638 SHSSQDLILKESDVEIVELQKKQLENKQLNEDLEKSLSDLKTENGKLMAAFEELKQELND 697
Query: 305 N-SKRRMDFLEK--VDQGVQVQGKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVP 361
S++ LEK V + ++++ ++ +
Sbjct: 698 TISEKNKVCLEKDTVVEALKLEKRHLETELNQTEKRLFEQAQKYEQTIEELSNARSMNTT 757
Query: 362 AYEPPHDKIEKLGSQ----ILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMED 417
A + H+++ KL + I EL Q + E +++L + +Q ++ LK+ E+
Sbjct: 758 ALQLEHERLVKLNQEKDFKIAELKRSMEQMEVDHQETKEMLTTSLGGQKQLTELLKEKEE 817
Query: 418 KNNKL 422
KL
Sbjct: 818 FIEKL 822
Score = 62 (26.9 bits), Expect = 0.00020, Sum P(3) = 0.00020
Identities = 19/67 (28%), Positives = 32/67 (47%)
Query: 367 HDKIEKLGSQILELGVQANQKRLQKSEKEKI-----LNQNKLTLRQCSDRLKDMEDKNNK 421
H + + + Q L+ + +K++ K E EK+ L+ K L QCS L D+ +
Sbjct: 524 HIETDSITKQ-LKFDIDVERKKVAKLEMEKMETIKELDTQKEKLSQCSYALNDLHISKQQ 582
Query: 422 LLHALRN 428
L +RN
Sbjct: 583 LQDNVRN 589
Score = 60 (26.2 bits), Expect = 4.1e-05, Sum P(3) = 4.1e-05
Identities = 36/149 (24%), Positives = 68/149 (45%)
Query: 102 KEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQFLPQ-DRVCEFAK 160
KEE+L + + + K N + + + T+ N ++ L Q L + + +
Sbjct: 432 KEENLKLRNEKEELEKE--LLNAQHKDENVISAYTEDQNSELRLLKQDLERKEHELNESI 489
Query: 161 LSPVKLLEETEKAVGDPQLPVQHC-ALVEKSSKLKTIECTVKRNGDTLN-QLKA-LNVEQ 217
L+ E E+ Q QH L EK SK + IE D++ QLK ++VE+
Sbjct: 490 AERETLIAELEELDKQNQEATQHMITLKEKLSK-QHIET------DSITKQLKFDIDVER 542
Query: 218 EKDVERVRQRAELLEKVESMKKKLPWLKY 246
+K + ++ E ++++++ K+KL Y
Sbjct: 543 KKVAKLEMEKMETIKELDTQKEKLSQCSY 571
Score = 56 (24.8 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 68/383 (17%), Positives = 144/383 (37%)
Query: 63 IALALGGDTQLLGRATSIGAYVKR-GEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWF 121
+ +LGG QL ++++ ++ +K L EE++ + +K D ++
Sbjct: 798 LTTSLGGQKQLTELLKEKEEFIEKLKNQASLVKQEL-----EEYMEVSKKQDVLKQN--- 849
Query: 122 FNGKVVPKGEVLEITKRFNIQVNNLTQFLP--QDRVCEFAKLSPVKLLEETEKAVGDPQL 179
V K + L I K N + + L Q R + + ++ E E V QL
Sbjct: 850 ----VEEKDKSLAIMKEENNHLKEEIERLKDQQSRATPVVEPKTLDIIIELESEV--TQL 903
Query: 180 PVQHCALVEKSS-KLKTIEC----TVKRNGDTLNQLKALNVE----QEKDVERVRQRAEL 230
V +L E+ KTIE TV+ Q K ++ ++ +V R E
Sbjct: 904 KVIKNSLEEEIEVHKKTIEDQNQKTVQLQQSLQEQRKEIDESKFQCEQMNVAHERLSLEK 963
Query: 231 LEKVESMKKKLPWLKYDMKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAI 290
E+++ ++K + +K + K + N + K K + + +
Sbjct: 964 DEEIKKLQKTIEQIKTQLHKERQVIQTDSTDLFQETKVQTLNGENGNEKHDLSKAEIERL 1023
Query: 291 LDGDCKKLSSLINENSKRRMDFLEKVDQGVQVQ-GKYKXXXXXXXXXXXXXXXILKARXX 349
+ G K+ I +++ + +++DQ + + GK + +
Sbjct: 1024 VKG-IKEREMEIKLLNEKNVSLSQQIDQLSKDEVGKLTRIIQEKDLEIQALSARVSSASY 1082
Query: 350 XXXXXXXXQTVPAYEPPHDKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCS 409
Q + AY +++ + L + + K+E KI++ + ++ +
Sbjct: 1083 RQDVLGLQQQLQAYVMEREQV------LAVLSEKTRENSQLKTEYHKIMDM--VAAKEAA 1134
Query: 410 DRLKDMEDKNNKLLHALRNSGAE 432
L ++++N KL + NSG +
Sbjct: 1135 --LVRLQEENQKLSNRFENSGQD 1155
Score = 55 (24.4 bits), Expect = 4.1e-05, Sum P(3) = 4.1e-05
Identities = 18/48 (37%), Positives = 27/48 (56%)
Query: 389 LQKSEKEK-ILNQNKLT-LRQCSDRLKDMEDKNNKLLHALRNSGAENI 434
LQKS +EK IL ++K L S+ L + E++N L A+ N N+
Sbjct: 1407 LQKSLREKDILIKSKSDQLLSVSENLSNKENENELLKQAVTNLKERNL 1454
Score = 52 (23.4 bits), Expect = 0.00025, Sum P(3) = 0.00025
Identities = 14/59 (23%), Positives = 37/59 (62%)
Query: 186 LVEKSSKLKTIECTVKRNGD---TLNQLKALNVEQ-EKDVERVRQRAELLEKVESMKKK 240
L EK S ++T++ +R D T ++ + + E+ + ++ ++R++ ++L+K S+++K
Sbjct: 1358 LQEKDSTIRTLQENNQRLSDSVATASEFERRSQEETDSEMRQIREKHDVLQK--SLREK 1414
Score = 49 (22.3 bits), Expect = 0.00049, Sum P(3) = 0.00049
Identities = 37/166 (22%), Positives = 77/166 (46%)
Query: 94 KISLRGDTKEEHLTI-MRKIDTR-NKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQF-L 150
K+ L DT E L + R ++T N++E + + +E + N + N T L
Sbjct: 704 KVCLEKDTVVEALKLEKRHLETELNQTEKRLFEQAQKYEQTIE--ELSNARSMNTTALQL 761
Query: 151 PQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQL 210
+R+ + + K+ E ++++ Q+ V H +++ ++ T G QL
Sbjct: 762 EHERLVKLNQEKDFKIAE-LKRSM--EQMEVDH----QETKEM----LTTSLGGQ--KQL 808
Query: 211 KALNVEQEKDVERVRQRAEL----LEKVESMKKKLPWLKYDMKKAE 252
L E+E+ +E+++ +A L LE+ + KK LK ++++ +
Sbjct: 809 TELLKEKEEFIEKLKNQASLVKQELEEYMEVSKKQDVLKQNVEEKD 854
Score = 46 (21.3 bits), Expect = 4.2e-06, Sum P(3) = 4.2e-06
Identities = 12/65 (18%), Positives = 36/65 (55%)
Query: 186 LVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQR-AELLEKVESMKKKLPWL 244
L+E + ++ + + L +++++N Q+ + ER+++ ++L EK E+ + ++ L
Sbjct: 38 LLEGAEEVGDAATELHVSNSRLREIESINAAQKSENERLKKVCSDLEEKHEAAELQIKQL 97
Query: 245 KYDMK 249
+ +
Sbjct: 98 SVEYR 102
>ZFIN|ZDB-GENE-030616-162 [details] [associations]
symbol:myh10 "myosin, heavy chain 10, non-muscle"
species:7955 "Danio rerio" [GO:0016459 "myosin complex"
evidence=IEA] [GO:0003774 "motor activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0051015 "actin filament
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003779 "actin binding" evidence=IEA]
InterPro:IPR000048 InterPro:IPR001609 InterPro:IPR002928
InterPro:IPR004009 InterPro:IPR008989 Pfam:PF00063 Pfam:PF00612
Pfam:PF01576 Pfam:PF02736 PRINTS:PR00193 PROSITE:PS50096
SMART:SM00015 SMART:SM00242 ZFIN:ZDB-GENE-030616-162 GO:GO:0005524
GO:GO:0003774 GO:GO:0016459 GeneTree:ENSGT00650000092896
SUPFAM:SSF50084 EMBL:AL954384 EMBL:FP017252 IPI:IPI00865727
Ensembl:ENSDART00000046359 Ensembl:ENSDART00000151114
Uniprot:F1R3G4
Length = 1992
Score = 152 (58.6 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 72/293 (24%), Positives = 136/293 (46%)
Query: 645 TEQRLIEDEAAK---LQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTA 701
T Q E+E AK K ++E++ +V +E+R ++E + L K K + + D+
Sbjct: 1031 TSQLAEEEEKAKNLGKVKNKQEMM-MVDLEERLKKEEKTRQELEKAKRKLDAETTDLQDQ 1089
Query: 702 LAKLVDQAADLNIQQFKYAIEIKNLLV---EIVSCKWSYAEKHMASIEFDAKIRELEFNL 758
+A+L Q +L IQ K E++ +L E V+ K + A K + E A++ EL+ +L
Sbjct: 1090 IAELQAQIDELKIQLAKKEEELQAVLARGDEEVAQK-NNALKQLR--ELQAQLAELQEDL 1146
Query: 759 KQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEEL- 817
+ + +A D +E+E + L D + + + E+E E+ I++
Sbjct: 1147 ESEKAARNKAEKLKRDLSEELEALKTELEDTLDTTAAQQELRSKREQEVAELKKAIDDET 1206
Query: 818 ---EAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLS-TKQ--EADKKELKRFLAEID 871
E+ IQ+ + Q + + I ++ E +R +L KQ E+D KEL + +
Sbjct: 1207 RNHESQIQE-MRQRHGTAL--EEISEQLEQAKRVKGNLEKNKQTLESDNKELTNEVKSLQ 1263
Query: 872 ALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEH--ESDFDKFGILIK 922
K + + L AQ+ E +R + V GE++ H +++ D L++
Sbjct: 1264 QAKSESEHKRKKLEAQLQEVMARFSEGEKVKGELADRTHKIQTELDNVSCLLE 1316
Score = 52 (23.4 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 15/55 (27%), Positives = 32/55 (58%)
Query: 371 EKLGSQILELGVQANQKRL--QKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLL 423
+K+ S I +L Q +++ QK + EK+ + K+ ++ + + +ED+N+K L
Sbjct: 965 KKMQSHIQDLEEQLDEEEAARQKLQLEKVTAEAKI--KKMEEDILLLEDQNSKFL 1017
>DICTYBASE|DDB_G0292068 [details] [associations]
symbol:frpA "fimbrin-related protein" species:44689
"Dictyostelium discoideum" [GO:0003779 "actin binding"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001589
InterPro:IPR001715 Pfam:PF00307 PROSITE:PS00020 PROSITE:PS50021
SMART:SM00033 dictyBase:DDB_G0292068 GenomeReviews:CM000155_GR
EMBL:AAFI02000187 eggNOG:COG5069 Gene3D:1.10.418.10 SUPFAM:SSF47576
RefSeq:XP_629809.1 ProteinModelPortal:Q54DR3
EnsemblProtists:DDB0232223 GeneID:8628490 KEGG:ddi:DDB_G0292068
InParanoid:Q54DR3 OMA:KENCLAR ProtClustDB:CLSZ2735176
Uniprot:Q54DR3
Length = 1096
Score = 121 (47.7 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 69/264 (26%), Positives = 121/264 (45%)
Query: 643 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENH-INLRKRKLESI-EKEDDINT 700
+ +++ I + AK +KE +V+ ++E EN I K+KLESI + D+
Sbjct: 841 LDIKEKRISERLAKTEKETTSKKQLVE-----KKEKENQKIQQEKQKLESILSQAKDMIG 895
Query: 701 ALAKLVDQAA-DLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEF-NL 758
+ K DQ + I Q K+ + + K S + + AK+ L+ N
Sbjct: 896 DIKKDKDQTIKEREIIQNKHKT-LMETVGSTTKTKKSLEQSKKDLEDKMAKLSSLKLENE 954
Query: 759 KQHEKLALQASLHYEDCKKEVEHCRK-HLSDAKRQAESIAFITPE-----LEKEFLEMPT 812
+QH+K + S E K+E++ R+ H + ++ AE + E L+K L++
Sbjct: 955 QQHKK---KLSDLQEKSKEELDKARQQHEKEQQKLAEKLEKQLKEDEDTLLKKNELQLQK 1011
Query: 813 TIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDA 872
T++ +E N S+A I + I +E E Q +E K E ++K+LK + E +
Sbjct: 1012 TLDSIER----NKSEAQRI---EEKIEKEKEEHQLALEKKKRKDERERKKLKEKV-EQEK 1063
Query: 873 LKEKWLPTLRNLV-AQINETFSRN 895
L EK L+N ++NE + N
Sbjct: 1064 L-EKLESLLKNKKDLELNENNNNN 1086
Score = 78 (32.5 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 40/151 (26%), Positives = 65/151 (43%)
Query: 176 DPQLPVQHCALVEKSSKLKTIECTVKRNGDT---LNQLKALN-VEQEKDVERVRQRAELL 231
D +L + H A ++K K E K T L+Q K +N + Q K+ E ++++ L
Sbjct: 667 DLKLDI-HFAAIQKEQTEKESERIKKEQSKTNQLLSQEKEINHLLQSKNTELYKEKSLLR 725
Query: 232 EKV-ESMKKKLPWLKYDMKKAEYIXXXXXXXXXXXXXXXXXNTLH-EFSKPIEGKKQEKA 289
EK ++M + LK + + I L E S +E KK E
Sbjct: 726 EKTSQAMAEAHQALKDNKLLEDQISKTNLEVDDTLINKQKLELLSIEDSAEVEMKKAE-- 783
Query: 290 ILDGDCKKLSSLINENSKRRMDFLEKVDQGV 320
+ D + K+L L + + LEKV+QG+
Sbjct: 784 VKD-EKKRLKKLKQLKQQEEKELLEKVEQGL 813
Score = 68 (29.0 bits), Expect = 0.00025, Sum P(3) = 0.00025
Identities = 51/241 (21%), Positives = 110/241 (45%)
Query: 85 KRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVN 144
KR E + I +T E+ + I+ K + K+E+ + + + ++ EI + +
Sbjct: 307 KRIEINKQQDIQFEEETNEK-IEIIEKEFQQQKTEYEIQIQQLEQ-QLQEIQESAGPTES 364
Query: 145 NLTQFLPQDRVCEFAKLSP-VKLLEETE----KAVGDP-QLPVQHCALVEKSSK--LKTI 196
L + L Q++ E KL + E E K++ + Q ++ L +++ LK +
Sbjct: 365 QLIEQLEQEKQ-EIQKLEQEISTSLENEYNEIKSISEQNQRELEQLKLNTSTNENELKLV 423
Query: 197 -ECTVKRNGDTLNQLKALNV-EQEKDVERVRQRA-ELLEKVESMKKKLPWLKYDM---KK 250
E + + LN+L++ + E ++ +E+V+Q+A E+ ++ ++K+ LK D+ K+
Sbjct: 424 KEKLDQEKQEILNKLESTGLLETKRQLEKVKQQAIEIESQIVTLKQSEKQLKVDLTETKE 483
Query: 251 AEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENSKRRM 310
++ NT K I+ K + + I+D K++ L +E + +
Sbjct: 484 DKHRISMAKKKIQDELVRAKDNT----EKMIKNKVETERIIDKTTKQVRDLRHEIDRIQN 539
Query: 311 D 311
D
Sbjct: 540 D 540
Score = 65 (27.9 bits), Expect = 0.00050, Sum P(3) = 0.00050
Identities = 33/144 (22%), Positives = 68/144 (47%)
Query: 103 EEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEIT-----KRFNIQVNNLTQFLPQDRVCE 157
E + I ++I+ + + F + K E++E + IQ+ L Q L + + E
Sbjct: 300 EVYEEIKKRIEINKQQDIQFEEETNEKIEIIEKEFQQQKTEYEIQIQQLEQQLQE--IQE 357
Query: 158 FAKLSPVKLLEETEKAVGDPQLPVQHCA--LVEKSSKLKTIECTVKRNGDTLNQLKALNV 215
A + +L+E+ E+ + Q Q + L + +++K+I ++N L QLK
Sbjct: 358 SAGPTESQLIEQLEQEKQEIQKLEQEISTSLENEYNEIKSIS---EQNQRELEQLKLNTS 414
Query: 216 EQEKDVERVRQRAELLEKVESMKK 239
E +++ V+++ + EK E + K
Sbjct: 415 TNENELKLVKEKLDQ-EKQEILNK 437
Score = 39 (18.8 bits), Expect = 0.00025, Sum P(3) = 0.00025
Identities = 15/61 (24%), Positives = 31/61 (50%)
Query: 400 QNKLTLRQCSDRLKDMEDKNNKLL-------HALRNSGAENIFEAYCWLQQHRHELNKEA 452
Q + T ++ S+R+K + K N+LL H L++ E +++ L++ + EA
Sbjct: 678 QKEQTEKE-SERIKKEQSKTNQLLSQEKEINHLLQSKNTE-LYKEKSLLREKTSQAMAEA 735
Query: 453 Y 453
+
Sbjct: 736 H 736
>WB|WBGene00006789 [details] [associations]
symbol:unc-54 species:6239 "Caenorhabditis elegans"
[GO:0003774 "motor activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016459 "myosin complex" evidence=IEA]
[GO:0010171 "body morphogenesis" evidence=IMP] [GO:0007413 "axonal
fasciculation" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0030241 "skeletal muscle myosin
thick filament assembly" evidence=IMP] [GO:0006936 "muscle
contraction" evidence=IMP] [GO:0048017 "inositol lipid-mediated
signaling" evidence=IPI] [GO:0043050 "pharyngeal pumping"
evidence=IPI] [GO:0018991 "oviposition" evidence=IMP] [GO:0005859
"muscle myosin complex" evidence=IDA] [GO:0008307 "structural
constituent of muscle" evidence=IDA] [GO:0005863 "striated muscle
myosin thick filament" evidence=IDA] [GO:0000146 "microfilament
motor activity" evidence=IDA] [GO:0051015 "actin filament binding"
evidence=IDA] InterPro:IPR001609 InterPro:IPR002928
InterPro:IPR004009 Pfam:PF00063 Pfam:PF01576 Pfam:PF02736
PRINTS:PR00193 SMART:SM00242 GO:GO:0005524 GO:GO:0018991
GO:GO:0010171 GO:GO:0040011 GO:GO:0051015 GO:GO:0043050
GO:GO:0006936 GO:GO:0000146 GO:GO:0008307 GO:GO:0007413
eggNOG:COG5022 GO:GO:0030241 EMBL:Z83107 GO:GO:0005863
GO:GO:0048017 KO:K10352 HOGENOM:HOG000173959 EMBL:J01050
EMBL:Z81499 EMBL:V01494 PIR:T20770 RefSeq:NP_493596.1
ProteinModelPortal:P02566 SMR:P02566 DIP:DIP-26548N IntAct:P02566
MINT:MINT-231086 STRING:P02566 PaxDb:P02566 GeneID:259839
KEGG:cel:CELE_F11C3.3 UCSC:F11C3.3.1 CTD:259839 WormBase:F11C3.3
InParanoid:P02566 NextBio:952628 Uniprot:P02566
Length = 1966
Score = 105 (42.0 bits), Expect = 4.8e-06, Sum P(3) = 4.8e-06
Identities = 39/140 (27%), Positives = 69/140 (49%)
Query: 119 EWF-FNGKVVPK---GEVLEITKRFNIQVNNLTQFLP-QDRVCEFAKLSPVKLLEE-TEK 172
EWF GKV P G+ E ++ N +V L L ++++ + + S KL+EE T
Sbjct: 840 EWFKLYGKVKPMLKAGKEAEELEKINDKVKALEDSLAKEEKLRKELEESSAKLVEEKTSL 899
Query: 173 AVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLE 232
Q E+ +KL+ + + LN A N ++ DV+R +++ E
Sbjct: 900 FTNLESTKTQLSDAEERLAKLEAQQKDASKQLSELNDQLADNEDRTADVQRAKKKIEA-- 957
Query: 233 KVESMKKKLPWLKYDMKKAE 252
+VE++KK++ L+ ++KAE
Sbjct: 958 EVEALKKQIQDLEMSLRKAE 977
Score = 102 (41.0 bits), Expect = 4.8e-06, Sum P(3) = 4.8e-06
Identities = 59/261 (22%), Positives = 111/261 (42%)
Query: 652 DEAAKLQKEREEIINI-VQIEKRKRR---EMENHINLRKRK--LESIEKEDDI--NTALA 703
D L++ +E++ + +Q+E+ +R E N KR L+S EKE+ + N A
Sbjct: 1650 DAQKNLKRYQEQVRELQLQVEEEQRNGADTREQFFNAEKRATLLQS-EKEELLVANEAAE 1708
Query: 704 KLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSY-AEKHMASIEFDAKIRELEFNLKQHE 762
+ QA A E + + S K E + D + E + ++ +
Sbjct: 1709 RARKQAEYEAADARDQANEANAQVSSLTSAKRKLEGEIQAIHADLDETLNEYKAAEERSK 1768
Query: 763 KLALQASLHYEDCKKEVEHCRKHLSDAKR----QAESIAFITPELEKEFLEM-PTTIEEL 817
K A+ E+ ++E EH + H+ ++ Q + I E E L+ I +L
Sbjct: 1769 KAIADATRLAEELRQEQEHSQ-HVDRLRKGLEQQLKEIQVRLDEAEAAALKGGKKVIAKL 1827
Query: 818 EAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKW 877
E +++ S+ + Q+ + R++ +L + + DKK +R ID L++K
Sbjct: 1828 EQRVRELESELDGEQRRFQDANKNLGRADRRVRELQFQVDEDKKNFERLQDLIDKLQQK- 1886
Query: 878 LPTLRNLVAQINETFSRNFQE 898
L T + V + E + N Q+
Sbjct: 1887 LKTQKKQVEEAEELANLNLQK 1907
Score = 95 (38.5 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 67/375 (17%), Positives = 153/375 (40%)
Query: 643 MQTEQRLIEDEAAKLQKEREEI-INIVQIEKRKR------REMENHINLRKRKLESIEKE 695
+Q ++ IE E L+K+ +++ +++ + E K+ R +++ + + + + KE
Sbjct: 948 VQRAKKKIEAEVEALKKQIQDLEMSLRKAESEKQSKDHQIRSLQDEMQQQDEAIAKLNKE 1007
Query: 696 ----DDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKI 751
++IN L + + D Q K +++ L ++ S + A + D +
Sbjct: 1008 KKHQEEINRKLMEDLQSEEDKGNHQNKVKAKLEQTLDDLED---SLEREKRARADLDKQK 1064
Query: 752 RELEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMP 811
R++E LK ++ ++ D + ++ L + E + +L+++ +
Sbjct: 1065 RKVEGELKIAQENIDESGRQRHDLENNLKKKESELHSVSSRLEDEQALVSKLQRQIKDGQ 1124
Query: 812 TTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIED----------LSTKQEADKK 861
+ I ELE +++ + ++ +E E ++++ ++ K+EA+
Sbjct: 1125 SRISELEEELENERQSRSKADRAKSDLQRELEELGEKLDEQGGATAAQVEVNKKREAELA 1184
Query: 862 ELKRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEMAVA-GEVSLDEHESDFDKFGIL 920
+L+R L E + E L LR + ++ A +V D+ ++ D +
Sbjct: 1185 KLRRDLEEANMNHENQLGGLRKKHTDAVAELTDQLDQLNKAKAKVEKDKAQAVRDAEDLA 1244
Query: 921 IKVKFRQSGQL--EVLSAHHQSG-GERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPIN 977
++ SG+L E L+ + E LQD T+ R+ E + +
Sbjct: 1245 AQLDQETSGKLNNEKLAKQFELQLTELQSKADEQSRQLQDFTSLKGRLHSENGDLVRQLE 1304
Query: 978 ERK-MFQQLVRAASQ 991
+ + QL R SQ
Sbjct: 1305 DAESQVNQLTRLKSQ 1319
Score = 94 (38.1 bits), Expect = 3.0e-05, Sum P(3) = 3.0e-05
Identities = 59/298 (19%), Positives = 120/298 (40%)
Query: 647 QRLIEDEAAKLQKEREEIINIVQIEKRK-------RREMENHINLRKRKLESIEKEDDIN 699
QR +E+ KL ++ V++ K++ RR++E + +L + K+
Sbjct: 1152 QRELEELGEKLDEQGGATAAQVEVNKKREAELAKLRRDLEEANMNHENQLGGLRKKH--T 1209
Query: 700 TALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLK 759
A+A+L DQ LN + K + + + ++ + + ++ E L
Sbjct: 1210 DAVAELTDQLDQLNKAKAKVEKDKAQAVRDAEDLAAQLDQETSGKLNNEKLAKQFELQLT 1269
Query: 760 QHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEA 819
+ + A + S +D D RQ E +L + ++ + +EE
Sbjct: 1270 ELQSKADEQSRQLQDFTSLKGRLHSENGDLVRQLEDAESQVNQLTRLKSQLTSQLEEARR 1329
Query: 820 AIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEAD-KKELKRFLAEIDALKEKWL 878
+ + ++ +N Y+H Q+++ S ++E + K E+ R L++ +A ++W
Sbjct: 1330 TADEEARERQTVAAQAKN----YQHEAEQLQE-SLEEEIEGKNEILRQLSKANADIQQWK 1384
Query: 879 PTLRN---LVA-QINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLE 932
L A ++ + R Q++ E +LD S K L K K R G L+
Sbjct: 1385 ARFEGEGLLKADELEDAKRRQAQKINELQE-ALDAANS---KNASLEKTKSRLVGDLD 1438
Score = 93 (37.8 bits), Expect = 3.7e-05, Sum P(3) = 3.7e-05
Identities = 62/291 (21%), Positives = 123/291 (42%)
Query: 647 QRLIEDEAAKLQKEREEIINIVQIEKRK-RREMENHINLRKRKLESIEKEDDINTALAKL 705
Q +++ A L+ E +++ Q+E + R E+E I ++ + E+ K N A A L
Sbjct: 1553 QHALDEAEAALEAEESKVLR-AQVEVSQIRSEIEKRIQEKEEEFENTRK----NHARA-L 1606
Query: 706 VDQAADLNIQQFKYA--IEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEK 763
A L + A + IK L ++ + A H DA + NLK++++
Sbjct: 1607 ESMQASLETEAKGKAELLRIKKKLEGDIN-ELEIALDHANKANADA-----QKNLKRYQE 1660
Query: 764 LALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPEL--EKEFLEMPTTIEELEAA- 820
+ L E+ ++ R+ +A+++A + EL E E E EAA
Sbjct: 1661 QVRELQLQVEEEQRNGADTREQFFNAEKRATLLQSEKEELLVANEAAERARKQAEYEAAD 1720
Query: 821 IQDNISQAN----SIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEK 876
+D ++AN S+ + + E + +++ + +A ++ K+ +A+ L E+
Sbjct: 1721 ARDQANEANAQVSSLTSAKRKLEGEIQAIHADLDETLNEYKAAEERSKKAIADATRLAEE 1780
Query: 877 WLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQ 927
+ +Q + + ++ +V LDE E+ K G + K Q
Sbjct: 1781 LRQEQEH--SQHVDRLRKGLEQQLKEIQVRLDEAEAAALKGGKKVIAKLEQ 1829
Score = 86 (35.3 bits), Expect = 0.00018, Sum P(3) = 0.00018
Identities = 48/221 (21%), Positives = 95/221 (42%)
Query: 643 MQTEQRLIEDEAAKLQKEREEIINIVQI-EKRKRREMENHINLRKRKLESIEKEDDINTA 701
+ + +R +E E + + +E +N + E+R ++ + + L + + E ++
Sbjct: 1735 LTSAKRKLEGEIQAIHADLDETLNEYKAAEERSKKAIADATRLAEELRQEQEHSQHVDR- 1793
Query: 702 LAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQH 761
L K ++Q Q K EI+ L E + +K +A +E ++RELE L
Sbjct: 1794 LRKGLEQ-------QLK---EIQVRLDEAEAAALKGGKKVIAKLE--QRVRELESELDGE 1841
Query: 762 EKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAI 821
++ ++D K +L A R+ + F E +K F + I++L+ +
Sbjct: 1842 QR-------RFQDANK-------NLGRADRRVRELQFQVDEDKKNFERLQDLIDKLQQKL 1887
Query: 822 QDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKE 862
+ Q L LQ+Y+ Q+ED ++ AD+ E
Sbjct: 1888 KTQKKQVEEAEELANLNLQKYKQLTHQLED--AEERADQAE 1926
Score = 82 (33.9 bits), Expect = 0.00045, Sum P(3) = 0.00045
Identities = 49/248 (19%), Positives = 102/248 (41%)
Query: 651 EDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAA 710
E A LQ E+EE++ + +R R++ E E+ + D N A A Q +
Sbjct: 1687 EKRATLLQSEKEELLVANEAAERARKQAE---------YEAADARDQANEANA----QVS 1733
Query: 711 DLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASL 770
L + K EI+ + ++ Y S + A L L+Q ++ +
Sbjct: 1734 SLTSAKRKLEGEIQAIHADLDETLNEYKAAEERSKKAIADATRLAEELRQEQEHSQHVDR 1793
Query: 771 HYEDCKKEVEHCRKHLSDAKRQA-ESIAFITPELEKEFLEMPTTIEELEAAIQD---NIS 826
+ +++++ + L +A+ A + + +LE+ E+ + ++ + QD N+
Sbjct: 1794 LRKGLEQQLKEIQVRLDEAEAAALKGGKKVIAKLEQRVRELESELDGEQRRFQDANKNLG 1853
Query: 827 QANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLVA 886
+A+ Q + E + +++DL K + K K+ + E + L L + L
Sbjct: 1854 RADRRVRELQFQVDEDKKNFERLQDLIDKLQQKLKTQKKQVEEAEELANLNLQKYKQLTH 1913
Query: 887 QINETFSR 894
Q+ + R
Sbjct: 1914 QLEDAEER 1921
Score = 79 (32.9 bits), Expect = 0.00089, Sum P(3) = 0.00089
Identities = 45/233 (19%), Positives = 93/233 (39%)
Query: 644 QTEQRLIEDEA-AKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTAL 702
+ + R D A + LQ+E EE+ + E+ + +N +KR+ E + D+ A
Sbjct: 1137 ERQSRSKADRAKSDLQRELEELGEKLD-EQGGATAAQVEVN-KKREAELAKLRRDLEEAN 1194
Query: 703 AKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHE 762
+Q L + E+ + L ++ K + EK A DA+ +L L Q
Sbjct: 1195 MNHENQLGGLRKKHTDAVAELTDQLDQLNKAK-AKVEKDKAQAVRDAE--DLAAQLDQET 1251
Query: 763 KLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQ 822
L + + ++ + + RQ + + L E ++ +E+ E
Sbjct: 1252 SGKLNNEKLAKQFELQLTELQSKADEQSRQLQDFTSLKGRLHSENGDLVRQLEDAE---- 1307
Query: 823 DNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKE 875
SQ N + L + + E +R ++ + +++ + K + E + L+E
Sbjct: 1308 ---SQVNQLTRLKSQLTSQLEEARRTADEEARERQTVAAQAKNYQHEAEQLQE 1357
Score = 47 (21.6 bits), Expect = 4.8e-06, Sum P(3) = 4.8e-06
Identities = 16/61 (26%), Positives = 28/61 (45%)
Query: 390 QKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAENIFEAYCWLQQHRHELN 449
Q+ + E L + + L S RL+D + +KL +++ G I E L+ R +
Sbjct: 1084 QRHDLENNLKKKESELHSVSSRLEDEQALVSKLQRQIKD-GQSRISELEEELENERQSRS 1142
Query: 450 K 450
K
Sbjct: 1143 K 1143
Score = 41 (19.5 bits), Expect = 1.9e-05, Sum P(3) = 1.9e-05
Identities = 13/47 (27%), Positives = 23/47 (48%)
Query: 369 KIEKLGSQIL----ELGVQANQKRLQKSEKEKILNQNKLTLRQCSDR 411
K+EK +Q + +L Q +Q+ K EK+ Q +L L + +
Sbjct: 1228 KVEKDKAQAVRDAEDLAAQLDQETSGKLNNEKLAKQFELQLTELQSK 1274
>UNIPROTKB|F1NX91 [details] [associations]
symbol:RAD50 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004518 "nuclease activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0030870 "Mre11
complex" evidence=IEA] InterPro:IPR004584 InterPro:IPR007517
Pfam:PF04423 GO:GO:0005524 GO:GO:0008270 GO:GO:0006281
GO:GO:0090305 GO:GO:0004518 GO:GO:0030870 InterPro:IPR013134
PANTHER:PTHR18867 TIGRFAMs:TIGR00606 PROSITE:PS51131
GeneTree:ENSGT00390000018781 EMBL:AADN02028242 EMBL:AADN02028243
EMBL:AADN02028244 IPI:IPI00572742 Ensembl:ENSGALT00000010987
ArrayExpress:F1NX91 Uniprot:F1NX91
Length = 1248
Score = 126 (49.4 bits), Expect = 5.5e-06, Sum P(4) = 5.5e-06
Identities = 55/280 (19%), Positives = 119/280 (42%)
Query: 651 EDEAAKLQKEREEIIN-------IVQIEKRKRREMENHINLRKRKLESIEKE-DDINTAL 702
E E K +K+R+E+I +V++++R ++ N + R ++ E ++ T L
Sbjct: 716 ESELKKREKKRDEMIGLKPIRQTVVELQERDIPDLRNRLQTVNRDFARLKGEIEEQETLL 775
Query: 703 AKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHE 762
++ + N ++ L+ C ++ +K ++ AK+ ++ N K
Sbjct: 776 QTVLSEKEGANA-----CLQDITLMERYQVCVCNFCQKLLSR---QAKLLGVDLNSKLQV 827
Query: 763 KLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQ 822
QA ++ ++E +K D + Q + + EL E L++ ++++ + +
Sbjct: 828 SQEKQAKKLWDTVTSKIELNQKMKQDQQNQIQELKSTVNELRAEKLQISSSVQRRQQLEE 887
Query: 823 DNISQANSIFFLNQNILQEYEH----------RQRQIEDLSTKQEADKKELKRFLAEIDA 872
+ + L++ I +E E Q+ EDL K+ A KE++ +++A
Sbjct: 888 QTVELTTEVQSLSREIKEEKEQVFPLDATLEKLQQDKEDLINKRTASNKEIQE---KMNA 944
Query: 873 LKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHES 912
+KEK + + +I + +E E LDE S
Sbjct: 945 IKEK-VKDINKYTKEIENYIQQGKEEYKKQKECELDEVNS 983
Score = 61 (26.5 bits), Expect = 5.5e-06, Sum P(4) = 5.5e-06
Identities = 19/78 (24%), Positives = 36/78 (46%)
Query: 45 LNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSIGAYVKRGEES---GYIKISLRGDT 101
L +++GPNG+GK++++ + GD + S K E+ I++ R D
Sbjct: 31 LTILVGPNGAGKTTIIECLKYISTGDFPPGTKGNSFVHDPKVANETDVRAQIRLQFR-DV 89
Query: 102 KEEHLTIMRKIDTRNKSE 119
E + + R + KS+
Sbjct: 90 SGELIAVQRSMVCTQKSK 107
Score = 53 (23.7 bits), Expect = 5.5e-06, Sum P(4) = 5.5e-06
Identities = 25/90 (27%), Positives = 40/90 (44%)
Query: 368 DKIE--KLG-SQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLH 424
DKI K G + ++L KRL + + K L SDR+ +++ + K+ H
Sbjct: 430 DKIRDRKTGLERSIDLKSDIQNKRLAELKNVKY---ELCQLEGSSDRIAELDREIVKMEH 486
Query: 425 AL----RNSGAENIFEAYCWLQQHRHELNK 450
L RNS E + + LQ + L+K
Sbjct: 487 ELEKAERNSNVETLEQEVQTLQNEKINLDK 516
Score = 50 (22.7 bits), Expect = 5.5e-06, Sum P(4) = 5.5e-06
Identities = 30/119 (25%), Positives = 45/119 (37%)
Query: 219 KDVERVRQ-RAELLEKVESMKKKLPWLKYDMKKAEYIXXXXXXXXXXXXXX--------X 269
K +E +RQ R + KV+ + +L +LK + +KA+ I
Sbjct: 187 KALETLRQVRLKQGTKVKECQTELKYLKQNKEKAQEIQDNLANREAQLSASKENIKSIES 246
Query: 270 XXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENSKRRMDF---LEKVDQGVQVQGK 325
+ L +E E LD + K L S + K D +EKV QG Q K
Sbjct: 247 QLDPLKSSLAAVEKNLMEVMSLDNNVKALESRRIQMEKDNQDLQRKMEKVFQGTDEQLK 305
Score = 50 (22.7 bits), Expect = 0.00019, Sum P(4) = 0.00019
Identities = 17/87 (19%), Positives = 36/87 (41%)
Query: 220 DVERVRQRAELLEK-VESMKKKLPWLKYDM-KKAEYIXXXXXXXXXXXXXXXXXNTLHEF 277
++ R R LL K + S +++ ++ ++ KK E + + L++
Sbjct: 586 EINETRSRHALLNKQLASAEQQKNYISAELRKKEEQLSNYEAKLFDVCGSQDFDSNLNKL 645
Query: 278 SKPIEGKKQEKAILDGDCKKLSSLINE 304
IE +++A+L G S I +
Sbjct: 646 QDEIEKSSKQRAVLAGATAVYSQFITQ 672
Score = 46 (21.3 bits), Expect = 0.00045, Sum P(4) = 0.00045
Identities = 12/53 (22%), Positives = 30/53 (56%)
Query: 188 EKSSKLKTIECTVKR-NGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKK 239
E++S ++T+E V+ + +N K L ++++E++ + ++E +KK
Sbjct: 492 ERNSNVETLEQEVQTLQNEKINLDKVLR-RLDQEMEQLNLHTTTITQMEMLKK 543
Score = 41 (19.5 bits), Expect = 7.8e-05, Sum P(4) = 7.8e-05
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 385 NQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLL 423
N +R K EKEK L+ K L + S + + ++LL
Sbjct: 310 NHQRTVK-EKEKRLSDCKRELDRASKECQRFNSEKSELL 347
Score = 38 (18.4 bits), Expect = 7.8e-05, Sum P(4) = 7.8e-05
Identities = 19/115 (16%), Positives = 44/115 (38%)
Query: 186 LVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLK 245
L + ++L + +K L+ LK+ EK++ V ++ +ES + ++
Sbjct: 227 LANREAQLSASKENIKSIESQLDPLKSSLAAVEKNLMEVMSLDNNVKALESRRIQMEKDN 286
Query: 246 YDMKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSS 300
D+++ T+ E K + K+E +C++ +S
Sbjct: 287 QDLQRKMEKVFQGTDEQLKDRYHNHQRTVKEKEKRLSDCKRELDRASKECQRFNS 341
Score = 37 (18.1 bits), Expect = 0.00019, Sum P(4) = 0.00019
Identities = 8/31 (25%), Positives = 17/31 (54%)
Query: 391 KSEKEKILNQNKLTLRQCSDRLKDMEDKNNK 421
++E + +++ + LR D+LK E + K
Sbjct: 691 EAELQDVISDLQSKLRLAPDKLKSTESELKK 721
>UNIPROTKB|E1C294 [details] [associations]
symbol:Gga.55054 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000226 "microtubule cytoskeleton organization"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0001932 "regulation of
protein phosphorylation" evidence=IEA] [GO:0030165 "PDZ domain
binding" evidence=IEA] [GO:0031648 "protein destabilization"
evidence=IEA] [GO:0043621 "protein self-association" evidence=IEA]
[GO:0051260 "protein homooligomerization" evidence=IEA]
InterPro:IPR008636 Pfam:PF05622 GO:GO:0005737 GO:GO:0000226
GO:GO:0051260 GO:GO:0001932 GO:GO:0031648
GeneTree:ENSGT00690000101702 OMA:KEQHQSM EMBL:AADN02003644
EMBL:AADN02003645 EMBL:AADN02003646 EMBL:AADN02003647
EMBL:AADN02003648 IPI:IPI00574848 Ensembl:ENSGALT00000017436
ArrayExpress:E1C294 Uniprot:E1C294
Length = 2028
Score = 130 (50.8 bits), Expect = 5.6e-06, Sum P(3) = 5.6e-06
Identities = 55/242 (22%), Positives = 107/242 (44%)
Query: 643 MQTEQRLIEDEAAKLQKEREEIIN-IVQIEKRKRREMENHINLRKRKLESIEKEDDINTA 701
+ TE++L++++ L+ + N I+ ++K+ E++ L+ + + + +++
Sbjct: 1070 LHTEKQLLKEQLKHLETQNVSFNNQILTLQKQNMFLQEHNTALQTQTAKLQVENSTLSSQ 1129
Query: 702 LAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAE-----KHMASIEFDAKIRELEF 756
A L+ Q A L QQ E +NLL + K Y +H+AS+ + + E E
Sbjct: 1130 SASLMAQNALLQNQQTAKENENENLLKQKEQLKAEYESLLQDHEHLASLH-EHQSTEYEL 1188
Query: 757 NLKQHEKL-ALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIE 815
+ QH L L +L E K + L K + + + + + E+E L+
Sbjct: 1189 LINQHSCLKTLHKNLDLEH--KGLGERYNSLMKQKAELDELE-LALKTEREVLQEERRSN 1245
Query: 816 ELEAAIQDNI-SQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALK 874
+ A + + + + FL+ + EYE ++L T + EL R+ A D LK
Sbjct: 1246 AITAGENQKLREELDRVNFLHSQLKAEYEGLHSHTKELKTSLNNSQLELNRWQARYDELK 1305
Query: 875 EK 876
E+
Sbjct: 1306 EQ 1307
Score = 71 (30.1 bits), Expect = 5.5e-05, Sum P(3) = 5.5e-05
Identities = 29/136 (21%), Positives = 62/136 (45%)
Query: 186 LVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLK 245
L E++ +L+ + T++ + Q++A N + E++ E +R+ E+L KV S K + L
Sbjct: 703 LDEENLELRKVVETMRFTSTKMAQIEAENKDLEREKEDLRKNVEML-KVLSKKSERLELS 761
Query: 246 YDMKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINEN 305
Y +E + E K ++ + E +L + ++L
Sbjct: 762 YQSINSE-------NQRLQQMLENSNKKIQELEKEVQATESENQVLQRNLEELKI----- 809
Query: 306 SKRRMDFLEKVDQGVQ 321
S +R++ LEK ++ ++
Sbjct: 810 SAKRLERLEKENKALE 825
Score = 66 (28.3 bits), Expect = 5.6e-06, Sum P(3) = 5.6e-06
Identities = 16/55 (29%), Positives = 34/55 (61%)
Query: 187 VEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKL 241
+EK +K+ + TV +N+L+ + +KD ++V+++ +E+VE M+K+L
Sbjct: 589 IEKENKI--LHETVTETSSKVNKLEFEKKQLQKDFDQVKEK---VERVEEMEKEL 638
Score = 58 (25.5 bits), Expect = 3.5e-05, Sum P(3) = 3.5e-05
Identities = 18/62 (29%), Positives = 34/62 (54%)
Query: 181 VQHCALVEKSSKLKTIECTVKRNGDTLNQLKAL--NVEQ-EKDVERV-RQRAELLEKVES 236
+ H + E SSK+ +E K+ +Q+K VE+ EK++ R+ ++ +L +K +
Sbjct: 595 ILHETVTETSSKVNKLEFEKKQLQKDFDQVKEKVERVEEMEKELHRLEKENEQLTKKATA 654
Query: 237 MK 238
MK
Sbjct: 655 MK 656
Score = 57 (25.1 bits), Expect = 5.6e-06, Sum P(3) = 5.6e-06
Identities = 20/66 (30%), Positives = 38/66 (57%)
Query: 362 AYEPPHDKIEKLGSQILELG---VQANQKRLQKSEKE-KILNQNKLTLRQCSDRLKDMED 417
+Y+ + + ++L Q+LE +Q +K +Q +E E ++L +N L+ + RL+ +E
Sbjct: 761 SYQSINSENQRL-QQMLENSNKKIQELEKEVQATESENQVLQRNLEELKISAKRLERLE- 818
Query: 418 KNNKLL 423
K NK L
Sbjct: 819 KENKAL 824
Score = 57 (25.1 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 23/88 (26%), Positives = 49/88 (55%)
Query: 165 KLLEETEKAVGDPQLPVQHCALVEKSSKL-KTIECTVKRNGDTLNQLKALNVEQEKDVER 223
++LE + K + + + VQ A ++ L + +E +K + L +L+ N E+++ +
Sbjct: 774 QMLENSNKKIQELEKEVQ--ATESENQVLQRNLE-ELKISAKRLERLEKENKALEQEISQ 830
Query: 224 VRQRAELLEKVESMKKKLPWLKYDMKKA 251
+ + +LLEK E+ K+L W + ++K A
Sbjct: 831 LEKDKKLLEK-ET--KRL-WQQVELKDA 854
Score = 52 (23.4 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 14/42 (33%), Positives = 23/42 (54%)
Query: 209 QLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKK 250
QL N+E K VE +R + + ++E+ K L K D++K
Sbjct: 702 QLDEENLELRKVVETMRFTSTKMAQIEAENKDLEREKEDLRK 743
Score = 44 (20.5 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 13/47 (27%), Positives = 24/47 (51%)
Query: 387 KRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAEN 433
K Q + K L + K LR+ + LK + K+ +L + ++ +EN
Sbjct: 723 KMAQIEAENKDLEREKEDLRKNVEMLKVLSKKSERLELSYQSINSEN 769
Score = 42 (19.8 bits), Expect = 5.5e-05, Sum P(3) = 5.5e-05
Identities = 33/156 (21%), Positives = 68/156 (43%)
Query: 379 ELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAENIFEAY 438
EL + A KRL++ EKE + +++ + +L + E K L+++ ++
Sbjct: 806 ELKISA--KRLERLEKENKALEQEISQLEKDKKLLEKETKRLWQQVELKDAILDDSTVKL 863
Query: 439 CWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLEDHVGHYIWKSFITQDAGDRDFLAKNL 498
++ L KE + + S+ + +D+ K I Q D+ LA L
Sbjct: 864 AVAEKENKTLEKE-----IAQFRDSSNKLKEFEKDN------KDLIKQVTIDKRTLA-TL 911
Query: 499 KPFDVPILNYVSNESSRKEPFQISEEMRALGISARL 534
+ D+ +L + ++ E ++S E+ +G+S L
Sbjct: 912 RE-DL-VLEKLKSQQLSSELDKLSLELEKIGLSKEL 945
>WB|WBGene00021469 [details] [associations]
symbol:Y39G10AR.11 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] GO:GO:0009792 GeneTree:ENSGT00700000104127
EMBL:FO081209 RefSeq:NP_490953.1 ProteinModelPortal:Q95XR6
PaxDb:Q95XR6 EnsemblMetazoa:Y39G10AR.11.1
EnsemblMetazoa:Y39G10AR.11.2 EnsemblMetazoa:Y39G10AR.11.3
GeneID:171785 KEGG:cel:CELE_Y39G10AR.11 UCSC:Y39G10AR.11.3
CTD:171785 WormBase:Y39G10AR.11 eggNOG:NOG283431
HOGENOM:HOG000017423 InParanoid:Q95XR6 OMA:QNINDEL NextBio:872689
Uniprot:Q95XR6
Length = 788
Score = 115 (45.5 bits), Expect = 5.7e-06, Sum P(3) = 5.7e-06
Identities = 65/293 (22%), Positives = 135/293 (46%)
Query: 647 QRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLV 706
+RL E +L +++EI+ + + + +R E ++ K+ + + + E + L + +
Sbjct: 477 RRLSEQRREELAAKKDEILKLNSLCELQRMEKVEWLSDLKKDVNAWKNETSVRIELKQKI 536
Query: 707 DQAADLNIQQFKYAIEIKNLLVEIVS-CKWSYAEKHMASIEFDA-KIR----------EL 754
DL Q +++N+L + S C+ Y + ++S++ D ++R E+
Sbjct: 537 ---TDLEEQNEGLEEKVENVLAQYRSECEL-Y-QNSVSSLQMDRDRLRKDVDLYKGKAEI 591
Query: 755 EFN-----LKQH---EKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKE 806
F +K + EK A Q L ++ +K VE +++ K A + E E+
Sbjct: 592 LFTKFGDLVKTNDELEKKAHQKMLEADNLRKTVEFSNMEMTNVK------ALMAMEREQI 645
Query: 807 FLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHR-QRQIEDLSTKQEADKKELKR 865
E +T+ +LE ++ N++ +SI N+N+L E R ED + EA + + R
Sbjct: 646 LEERHSTVRDLEEKLK-NLTMTSSI---NKNLLAEARRSIARLTEDAKEQSEAQEFDRLR 701
Query: 866 FLAEIDALKEKWLPTLRNLVAQINETFSRN--FQEMAVAGEVSLDEHESDFDK 916
+ ++D LKE +NL ++ E+ + + + + S D +S+ D+
Sbjct: 702 WNDQVDQLKEVNEELKKNLGVEVLESSDDSDCSSDSSSDSDCSSDSSDSEEDE 754
Score = 73 (30.8 bits), Expect = 5.7e-06, Sum P(3) = 5.7e-06
Identities = 20/62 (32%), Positives = 34/62 (54%)
Query: 371 EKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSG 430
E+L S G++A+QK Q++E KI N+ L+ + ++++ED N+ L L G
Sbjct: 203 ERLKSSSKPSGIRADQKMFQENEM-KIQELNR-KLKDALEAIEEIEDANSALRVDLERRG 260
Query: 431 AE 432
E
Sbjct: 261 VE 262
Score = 54 (24.1 bits), Expect = 0.00043, Sum P(3) = 0.00043
Identities = 18/81 (22%), Positives = 40/81 (49%)
Query: 372 KLGSQILELGVQANQKRLQ-KSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSG 430
KL E Q ++ ++ +++KE ILN K + + ++RL+++ +L + + SG
Sbjct: 154 KLTEHFKEAETQLRRENVKLEAQKEDILNHTKNSEKMWNERLENITADFERLKSSSKPSG 213
Query: 431 AENIFEAYCWLQQHRHELNKE 451
+ + + ELN++
Sbjct: 214 IRADQKMFQENEMKIQELNRK 234
Score = 52 (23.4 bits), Expect = 5.7e-06, Sum P(3) = 5.7e-06
Identities = 18/65 (27%), Positives = 32/65 (49%)
Query: 188 EKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYD 247
+ SS L+ ++ +L AL + E ++ERVR E VE ++KKL + +
Sbjct: 12 QTSSSLERRVTELQDENKSLRLTLALRTDCEHELERVRN--ETHPGVEELEKKLASAENE 69
Query: 248 MKKAE 252
++ E
Sbjct: 70 IRVME 74
Score = 47 (21.6 bits), Expect = 1.8e-05, Sum P(3) = 1.8e-05
Identities = 17/74 (22%), Positives = 37/74 (50%)
Query: 167 LEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQ 226
+EE EK + + ++ ++E ++K + T+ D L ++ + KDV+ + +
Sbjct: 56 VEELEKKLASAENEIR---VMESTNK--ELMATLATTRDQLGKMLRERNQLVKDVDELHE 110
Query: 227 RAELLEKVESMKKK 240
+EK+ES+ K
Sbjct: 111 E---IEKMESLYNK 121
>TAIR|locus:2096334 [details] [associations]
symbol:AT3G05130 "AT3G05130" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AC009177
HSSP:P17676 IPI:IPI00545448 RefSeq:NP_187164.1 UniGene:At.65065
ProteinModelPortal:Q9MAA6 SMR:Q9MAA6 PRIDE:Q9MAA6
EnsemblPlants:AT3G05130.1 GeneID:819675 KEGG:ath:AT3G05130
TAIR:At3g05130 HOGENOM:HOG000153259 InParanoid:Q9MAA6 OMA:TINSERA
PhylomeDB:Q9MAA6 ProtClustDB:CLSN2684463 Genevestigator:Q9MAA6
Uniprot:Q9MAA6
Length = 634
Score = 131 (51.2 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 53/236 (22%), Positives = 102/236 (43%)
Query: 646 EQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIE-KEDDINTALAK 704
E+ LIE + L + + ++ R++ E+E I R+RKL + K D++ A+A
Sbjct: 349 EKNLIEKQMEMLNVQSSDKGKLIDQLSREKVELEERIFSRERKLVELNRKADELTHAVAV 408
Query: 705 LVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKL 764
L D K + ++ L + + E A E +L+ + + EK+
Sbjct: 409 LQKNCDDQTKINGKLSCKVDQLSNALAQVELRREEADKALDEEKRNGEDLKAEVLKSEKM 468
Query: 765 ALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQD- 823
+ E K E + +D + Q+ES+ +LEKE +E+ +E L+ ++
Sbjct: 469 VAKTLEELEKVKIERKSLFSAKNDLESQSESLKSENVKLEKELVELRKAMEALKTELESA 528
Query: 824 NISQANSIFFLNQ--NILQEYEHRQRQIEDLSTKQEADKKELKRFLAEID-ALKEK 876
+ S+ L ++L + E+R+ ++ K+E + L I+ A K K
Sbjct: 529 GMDAKRSMVMLKSAASMLSQLENREDRLISEEQKREIGTEPYAMELESIEKAFKNK 584
Score = 61 (26.5 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 32/124 (25%), Positives = 58/124 (46%)
Query: 127 VPKGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCAL 186
V KGE +E+T + I+ L +VC+ L + E+ + V+ L
Sbjct: 149 VLKGEAIELTGKVEIEKEQLR------KVCDERDLIKNGFDLQHEEVNRLKECVVR---L 199
Query: 187 VEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKV-ESMKKKLPWLK 245
EK S L+ + ++ + L +K V +E ++E V++ LEK+ E K ++ LK
Sbjct: 200 EEKESNLEIVIGKLESENERL--VKERKVREE-EIEGVKKEKIGLEKIMEEKKNEIDGLK 256
Query: 246 YDMK 249
++K
Sbjct: 257 REIK 260
Score = 54 (24.1 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 16/77 (20%), Positives = 42/77 (54%)
Query: 165 KLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERV 224
K+ EE + V ++ ++ + EK +++ ++ +K N+++ + +EQ+ +E +
Sbjct: 225 KVREEEIEGVKKEKIGLEKI-MEEKKNEIDGLKREIKVLLSEKNEMEIVKIEQKGVIEEL 283
Query: 225 RQRAELL-EKVESMKKK 240
++ + L E V S+ K+
Sbjct: 284 ERKLDKLNETVRSLTKE 300
>DICTYBASE|DDB_G0290503 [details] [associations]
symbol:DDB_G0290503 species:44689 "Dictyostelium
discoideum" [GO:0005543 "phospholipid binding" evidence=IEA]
InterPro:IPR001849 PROSITE:PS50003 SMART:SM00233
dictyBase:DDB_G0290503 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 eggNOG:NOG12793 EMBL:AAFI02000164
RefSeq:XP_635612.1 HSSP:P11978 ProteinModelPortal:Q54G05
PRIDE:Q54G05 EnsemblProtists:DDB0188916 GeneID:8627684
KEGG:ddi:DDB_G0290503 OMA:FNSKKQQ Uniprot:Q54G05
Length = 1492
Score = 140 (54.3 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 60/262 (22%), Positives = 120/262 (45%)
Query: 645 TEQRLIEDEAAK-LQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALA 703
T Q +DE+ K L+K+ E++++I + ++ + +N I K++ I+ +++N+
Sbjct: 184 TLQLSSKDESMKSLEKQVEKLVDIEHRSEIEQTKKDNEILKLTEKIKEIQLIENLNSTND 243
Query: 704 KLVDQAADLNIQQFKYAI-EIK---NLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLK 759
V+Q + NI++ + ++ EIK N L ++ + EK + + + + +E E N
Sbjct: 244 SKVNQLLEDNIKRLQESLNEIKDENNDLQSLIDTQKQQFEKRINQYQLEIQDKENELNEM 303
Query: 760 QHEKLA----LQASLHYE--DCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTT 813
+ L+ Q SL D + + L + +S+ I + KE
Sbjct: 304 NQQSLSQVKSFQQSLQQSQLDLENDKNQFSTKLQLVNNEIQSLKSIVDDKLKEIQLKDNQ 363
Query: 814 IEELEAAIQ-DNISQANSIFFLNQNILQ---EYEHRQRQIEDLSTKQEADK-KELKRFLA 868
+ +L + DN I LN NI + + + +I++LS KQ DK KE++ +
Sbjct: 364 LTQLNQQHEIDNNKNNQMILELNDNISKISNQLNEKDNKIQELS-KQSIDKQKEIENSTS 422
Query: 869 EIDALKEKWLPTLRNLVAQINE 890
D L+ K L+ ++N+
Sbjct: 423 SSDQLQLKLNDISNELLEKLND 444
Score = 102 (41.0 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 45/279 (16%), Positives = 123/279 (44%)
Query: 643 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTAL 702
++ Q +++ +KL +++ EI +++ + E+++ +N + +++ ++ + +N +
Sbjct: 721 IENNQSSLDELQSKLNEKQNEINQLIENNQSSSDELQSKLNEKHQEISELQSK--LNELI 778
Query: 703 AKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAK----IRELEFNL 758
+ +L + + + E+K ++ S E ++ + EL+ L
Sbjct: 779 ENNESSSDELQSKLIQLSDELKEKDEKLKSLDSIIIENQEKLVQLTKSNQDSLDELQSKL 838
Query: 759 KQHEKLALQASLHYEDCKKEVEH-CRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEEL 817
+ + + + + E++ + ++ E+ + EL+ + E I EL
Sbjct: 839 NEKQNEINELIENNQSSSNELQSKLNEKQNEINLLIENNQSSSDELQSKLNEKHQEINEL 898
Query: 818 EAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKW 877
++ + + ++ N + N++ E + + Q+ D ++E +LK F + I EK
Sbjct: 899 QSKLNEKQNKINELVENNESSSDELQSKLIQLSDQLQEKE---NQLKSFESSIIERDEK- 954
Query: 878 LPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDK 916
L L +++NE ++ + SLDE +S+ ++
Sbjct: 955 ---LNQLQSKLNEK-QNEIDQITENNQSSLDELQSNLNE 989
Score = 99 (39.9 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 84/388 (21%), Positives = 163/388 (42%)
Query: 76 RATSIGAYVKRGEESGYIK-ISLRGDTKEEHLTIMRK-----IDTRNKSEWFFNGKVVPK 129
R I K+ +E IK ++L+ +K+E + + K +D ++SE K
Sbjct: 166 RTIEIQETTKKEQE---IKSLTLQLSSKDESMKSLEKQVEKLVDIEHRSEIEQTKK---D 219
Query: 130 GEVLEITKRFN-IQ-VNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALV 187
E+L++T++ IQ + NL +V + + +K L+E+ + D +Q
Sbjct: 220 NEILKLTEKIKEIQLIENLNS-TNDSKVNQLLE-DNIKRLQESLNEIKDENNDLQSLIDT 277
Query: 188 EKSSKLKTI---ECTVKRNGDTLNQLKALNVEQEKDVERVRQRAEL-LEKVESM-KKKLP 242
+K K I + ++ + LN++ ++ Q K ++ Q+++L LE ++ KL
Sbjct: 278 QKQQFEKRINQYQLEIQDKENELNEMNQQSLSQVKSFQQSLQQSQLDLENDKNQFSTKLQ 337
Query: 243 WLKYDMKKAEYIXXXXXXXXXXXXXXXXX-NTLHEFSKPIEGKKQEKAILD--GDCKKLS 299
+ +++ + I N HE I+ K + IL+ + K+S
Sbjct: 338 LVNNEIQSLKSIVDDKLKEIQLKDNQLTQLNQQHE----IDNNKNNQMILELNDNISKIS 393
Query: 300 SLINENSKRRMDFLEKVDQGVQVQGKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQT 359
+ +NE + + L K Q + Q + + LK
Sbjct: 394 NQLNEKDNKIQE-LSK--QSIDKQKEIENSTSSSDQLQ------LKLNDISNELLEKLND 444
Query: 360 VPAYEPPHDKIEKLGSQILELGVQANQKRLQKSEKEKILNQ---N--------KLTLRQC 408
+ +K++ +QILE+ + N+K Q K+ LNQ N KL L Q
Sbjct: 445 INQLS---NKLQDKENQILEINNKLNEKENQLISKDNQLNQLIENNESSSDELKLKLNQL 501
Query: 409 SDRLKDMEDK--NNK-LLHALRNSGAEN 433
SD L++ ++K NN+ +++ L+++ EN
Sbjct: 502 SDELQEKDEKLLNNQSVINELQSNLNEN 529
Score = 94 (38.1 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 78/389 (20%), Positives = 160/389 (41%)
Query: 662 EEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALA--KLVDQAADLNIQQFKY 719
EE I +++ K K +++EN +NL K + EK DDIN KL+ + Q+
Sbjct: 1125 EENIQLIEELKEKLQDLENELNLEKDTVN--EKNDDINELKEEIKLISEKLSEKEQELNE 1182
Query: 720 AI-EIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYEDCKKE 778
I + L EI K + S+ L+ N K +E +L + + + +
Sbjct: 1183 MINDYDESLNEINDQK-----DLVKSLNERLTNAHLKINEKDNEIHSLSKE-GFNEIQSQ 1236
Query: 779 VEHCRKHLSDAKR----QAESIAFITPELEKEFLEMPTT--IEELEAAIQDNISQANSIF 832
+ LS+ +++ I+ + +L + + E ++ + + + I ++S +N
Sbjct: 1237 LNLITNQLSEKDNLLIEKSQIISDLELQLRESYKERSSSSSLHQQQQMISPDLSNSNDEL 1296
Query: 833 FLN-QNILQEYEHRQRQIE----DLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLVAQ 887
+ + I+ E + + +Q+E DL + +K+E + +++ + W + L +
Sbjct: 1297 IVEKEEIINELKEKNQQLEQQLQDLCQQFNKNKQENELKCQQLEEENDGWKNEIDTLNQR 1356
Query: 888 INETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVLSAHHQSGGERSVS 947
+ +T S N + + LD + L K +SG+++ L + ++
Sbjct: 1357 L-KTQSLNTSPDSSELQQQLDIISNQELNIKQLEKELQDKSGKIDNLEYQVEEMNKQ--- 1412
Query: 948 TILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTPQCFLLTPKLLPD 1007
Y + + TN + I +D I E K F + R+ + ++ + D
Sbjct: 1413 ---YHIDINQKTNESSEKLQSIQLEIDTIRE-KYFFAIARSLKLQGAQMGWSMSRSIF-D 1467
Query: 1008 LEYSEACSILNIMNGPWIEQPSKVWSSGE 1036
+ + E S LNI W P +W S +
Sbjct: 1468 M-FDEIKS-LNINFDEW---P--IWISNQ 1489
Score = 92 (37.4 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 72/306 (23%), Positives = 123/306 (40%)
Query: 680 NHINLRKRKLESIEKEDDINTAL----AKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKW 735
N + + + + + EKE +IN + + L + + LN +Q + I+N +
Sbjct: 699 NQVTVNELQSKLNEKEININQLIENNQSSLDELQSKLNEKQNEINQLIENNQSSSDELQS 758
Query: 736 SYAEKHMASIEFDAKIRELEFNLKQHEKLALQASL-HYEDCKKEVEHCRKHL-SDAKRQA 793
EKH E +K+ EL N + LQ+ L D KE + K L S
Sbjct: 759 KLNEKHQEISELQSKLNELIEN-NESSSDELQSKLIQLSDELKEKDEKLKSLDSIIIENQ 817
Query: 794 ESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQ-EYEHRQRQIEDL 852
E + +T + E+ + + E + I + I S + N LQ + +Q +I L
Sbjct: 818 EKLVQLTKSNQDSLDELQSKLNEKQNEINELIENNQS----SSNELQSKLNEKQNEINLL 873
Query: 853 STKQEADKKELKRFL----AEIDALKEKWLPTLRNLVAQI---NETFSRNFQEMAVAGEV 905
++ EL+ L EI+ L+ K L +N + ++ NE+ S Q +
Sbjct: 874 IENNQSSSDELQSKLNEKHQEINELQSK-LNEKQNKINELVENNESSSDELQSKLIQLSD 932
Query: 906 SLDEHESDFDKFGILIKVKFRQSGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRV 965
L E E+ F I + + QL+ S ++ E T SL +L +
Sbjct: 933 QLQEKENQLKSFESSIIERDEKLNQLQ--SKLNEKQNEIDQITENNQSSLDELQSNLNEK 990
Query: 966 VDEINQ 971
+EINQ
Sbjct: 991 QNEINQ 996
Score = 90 (36.7 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 87/458 (18%), Positives = 181/458 (39%)
Query: 89 ESGYIKIS-LRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPK-GEVLEITKRFNIQVNNL 146
+S + ++ L+ E+ + I + I+ S K+ K E+ ++ + + L
Sbjct: 697 QSNQVTVNELQSKLNEKEININQLIENNQSSLDELQSKLNEKQNEINQLIENNQSSSDEL 756
Query: 147 TQFLPQ--DRVCEF-AKLSPVKLLEETEKAVGDPQLPVQHCA--LVEKSSKLKTIECTVK 201
L + + E +KL+ +L+E E + + Q + + L EK KLK+++ +
Sbjct: 757 QSKLNEKHQEISELQSKLN--ELIENNESSSDELQSKLIQLSDELKEKDEKLKSLDSIII 814
Query: 202 RNGDTLNQLKALNVE-----QEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAEYIXX 256
N + L QL N + Q K E+ + EL+E +S +L K + K+ E
Sbjct: 815 ENQEKLVQLTKSNQDSLDELQSKLNEKQNEINELIENNQSSSNELQ-SKLNEKQNEINLL 873
Query: 257 XXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENSKRRMDFLEKV 316
N H+ ++ K EK K++ L+ N + K+
Sbjct: 874 IENNQSSSDELQSKLNEKHQEINELQSKLNEKQ------NKINELVENNESSSDELQSKL 927
Query: 317 DQ-GVQVQGKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPAYEPPHDKIEKLGS 375
Q Q+Q K + + + + E +++L S
Sbjct: 928 IQLSDQLQEKENQLKSFESSIIERDEKLNQLQSKLNEKQNEIDQIT--ENNQSSLDELQS 985
Query: 376 QILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRN--SGAEN 433
+ E + NQ ++ ++ Q+KL +++L ++ +K+NK+ ++ S +++
Sbjct: 986 NLNEKQNEINQL-IENNQSSLDELQSKL-----NEKLNEINEKDNKINELIQTNESLSKD 1039
Query: 434 IFEAYCWLQQHRHELNKEAY--GPVLLEVNVSNRAHANYLEDHVGHYIWKSFITQDAGDR 491
+ L+Q E N + +++VN N L I K ++ ++
Sbjct: 1040 QQSKFENLEQELEEKNNKILDLNSQIIDVNHQFSEKENELNQLQLKLIEKDQEIENQNNK 1099
Query: 492 --DFLAK-NLKPFDVPILNYVSNESSRKEPFQISEEMR 526
D + N K ++ I N N+++ +E Q+ EE++
Sbjct: 1100 IIDINNQLNEKEKEININN--DNDNNNEENIQLIEELK 1135
Score = 89 (36.4 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 50/284 (17%), Positives = 128/284 (45%)
Query: 643 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIE-KEDDINTA 701
++ Q + +KL +++ EI +++ + E+++ +N + +++ ++ K ++
Sbjct: 849 IENNQSSSNELQSKLNEKQNEINLLIENNQSSSDELQSKLNEKHQEINELQSKLNEKQNK 908
Query: 702 LAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQH 761
+ +LV+ + + I++ + L E + S+ + IE D K+ +L+ L +
Sbjct: 909 INELVENNESSSDELQSKLIQLSDQLQEKENQLKSFES---SIIERDEKLNQLQSKLNEK 965
Query: 762 EKLALQASLHYEDCKKEVE-HCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAA 820
+ Q + + + E++ + + ++ + E+ EL+ + E I E +
Sbjct: 966 QNEIDQITENNQSSLDELQSNLNEKQNEINQLIENNQSSLDELQSKLNEKLNEINEKDNK 1025
Query: 821 IQDNISQANSIFFLNQ-----NILQEYEHRQRQIEDLSTK------QEADKK-ELKRFLA 868
I + I Q N +Q N+ QE E + +I DL+++ Q ++K+ EL +
Sbjct: 1026 INELI-QTNESLSKDQQSKFENLEQELEEKNNKILDLNSQIIDVNHQFSEKENELNQLQL 1084
Query: 869 EIDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHES 912
++ K++ + N + IN + +E+ + + + E+
Sbjct: 1085 KLIE-KDQEIENQNNKIIDINNQLNEKEKEININNDNDNNNEEN 1127
Score = 68 (29.0 bits), Expect = 0.00097, Sum P(3) = 0.00097
Identities = 19/75 (25%), Positives = 41/75 (54%)
Query: 165 KLLEETEKAVGDPQLPVQHCA--LVEKSSKLKTIECTVKRNGDTLNQLKA-LNVEQEKDV 221
+L+E + + + +L + + L EK KLK++E ++ + ++QL+ LN +Q+K
Sbjct: 535 ELIENNQSSSDELKLKLNQLSDKLQEKDEKLKSLESSIIERDEKIDQLQDNLNEKQDKIN 594
Query: 222 ERVRQRAELLEKVES 236
E V ++++S
Sbjct: 595 ELVENNESSSDELQS 609
Score = 57 (25.1 bits), Expect = 0.00097, Sum P(3) = 0.00097
Identities = 20/83 (24%), Positives = 43/83 (51%)
Query: 368 DKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALR 427
DK E + S LE + NQ +L ++++ N++T+ + +L + E N+L+ +
Sbjct: 673 DKNENVRS--LETSIIENQDKL-----DQLIQSNQVTVNELQSKLNEKEININQLIENNQ 725
Query: 428 NSGAENIFEAYCWLQQHRHELNK 450
+S + E L + ++E+N+
Sbjct: 726 SS----LDELQSKLNEKQNEINQ 744
>WB|WBGene00002348 [details] [associations]
symbol:myo-1 species:6239 "Caenorhabditis elegans"
[GO:0003774 "motor activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016459 "myosin complex" evidence=IEA]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0048017 "inositol
lipid-mediated signaling" evidence=IPI] [GO:0043050 "pharyngeal
pumping" evidence=IPI] [GO:0006936 "muscle contraction"
evidence=IMP] [GO:0005863 "striated muscle myosin thick filament"
evidence=IDA] [GO:0008307 "structural constituent of muscle"
evidence=IDA] InterPro:IPR001609 InterPro:IPR002928
InterPro:IPR004009 Pfam:PF00063 Pfam:PF01576 Pfam:PF02736
PRINTS:PR00193 SMART:SM00242 GO:GO:0005524 GO:GO:0009792
GO:GO:0040007 GO:GO:0002119 GO:GO:0043050 GO:GO:0006936
GO:GO:0008307 GO:GO:0003774 eggNOG:COG5022 EMBL:Z71266
GO:GO:0005863 GO:GO:0048017 GeneTree:ENSGT00650000092896 KO:K10352
HOGENOM:HOG000173959 EMBL:X08065 EMBL:Z71261 EMBL:M37232
EMBL:M37234 PIR:T21193 RefSeq:NP_492053.1 ProteinModelPortal:P02567
SMR:P02567 DIP:DIP-24827N MINT:MINT-1102984 STRING:P02567
PaxDb:P02567 EnsemblMetazoa:R06C7.10.1 EnsemblMetazoa:R06C7.10.2
GeneID:172471 KEGG:cel:CELE_R06C7.10 UCSC:R06C7.10.1 CTD:172471
WormBase:R06C7.10 InParanoid:P02567 OMA:TEDARSD NextBio:875649
Uniprot:P02567
Length = 1938
Score = 125 (49.1 bits), Expect = 6.3e-06, Sum P(3) = 6.3e-06
Identities = 58/265 (21%), Positives = 116/265 (43%)
Query: 656 KLQKEREEIINIVQIEKRKRREM-ENHINLRKRKLESIEKEDDINTALAKLVDQAADLNI 714
KL + +E+ V E+R+R E+ EN++ KR ++ + +D+ + L I
Sbjct: 1652 KLFDQVKELQGQVDDEQRRREEIRENYLAAEKRLAIALSESEDLAHRIEASDKHKKQLEI 1711
Query: 715 QQFKYAIEIKNLLVEIVSCKWSY-AEKHMASIEFDAKIRELE--FN-LKQHEKLALQASL 770
+Q E+K+ E++ + A K E EL+ N LK E+ A +A+
Sbjct: 1712 EQ----AELKSSNTELIGNNAALSAMKRKVENEVQIARNELDEYLNELKASEERARKAAA 1767
Query: 771 HYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAA----IQDNIS 826
+ +EV ++H RQ +S+ EL+ + + + + A ++D +
Sbjct: 1768 DADRLAEEVRQEQEHAVHVDRQRKSLELNAKELQAKIDDAERAMIQFGAKALAKVEDRVR 1827
Query: 827 QANSIFFLNQNILQE----YEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLR 882
+ Q QE Y ++R+ +L + E DKK R ++ L++K + +
Sbjct: 1828 SLEAELHSEQRRHQESIKGYTKQERRARELQFQVEEDKKAFDRLQENVEKLQQK-IRVQK 1886
Query: 883 NLVAQINETFSRN---FQEMAVAGE 904
+ + E ++N F+++ +A E
Sbjct: 1887 RQIEEAEEVATQNLSKFRQIQLALE 1911
Score = 111 (44.1 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 50/237 (21%), Positives = 110/237 (46%)
Query: 647 QRLIEDEAAKLQKEREEII-NIVQIEKRKRREMENHINLRKRKLES----IEKEDDINTA 701
++ +E E A+L+ E+I N + KR+ +EN + + + +L+ ++ ++
Sbjct: 1706 KKQLEIEQAELKSSNTELIGNNAALSAMKRK-VENEVQIARNELDEYLNELKASEERARK 1764
Query: 702 LAKLVDQAADLNIQQFKYAIEI----KNLLVEIVSCKWSYAEKHMASIEFDAK-IRELEF 756
A D+ A+ Q+ ++A+ + K+L + + + A I+F AK + ++E
Sbjct: 1765 AAADADRLAEEVRQEQEHAVHVDRQRKSLELNAKELQAKIDDAERAMIQFGAKALAKVED 1824
Query: 757 NLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEE 816
++ +L+A LH E ++ E + + +R+A + F E +K F + +E+
Sbjct: 1825 RVR-----SLEAELHSEQ-RRHQESIKGYTKQ-ERRARELQFQVEEDKKAFDRLQENVEK 1877
Query: 817 LEAAIQ---DNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEI 870
L+ I+ I +A + QN L ++ Q +E+ + E + L R ++
Sbjct: 1878 LQQKIRVQKRQIEEAEEV--ATQN-LSKFRQIQLALENAEERAEVAENSLVRMRGQV 1931
Score = 110 (43.8 bits), Expect = 0.00021, Sum P(3) = 0.00021
Identities = 63/351 (17%), Positives = 149/351 (42%)
Query: 647 QRLIEDEAAKLQKEREEIINIVQIEKRK-RREMENHINLRKRKLESIEKE-----DDINT 700
Q +++ A L+ E +++ + QIE ++ R E+E I ++ + E+ K + I
Sbjct: 1548 QHALDEAEAALEAEESKVLRL-QIEVQQIRSEIEKRIQEKEEEFENTRKNHQRALESIQA 1606
Query: 701 ALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQ 760
+L A+L + K +I L + + +A K A+++ +++L +K+
Sbjct: 1607 SLETEAKSKAELARAKKKLETDINQLEIAL-----DHANK--ANVDAQKNLKKLFDQVKE 1659
Query: 761 HEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAA 820
+ E+ ++ K L+ A ++E +A +K ++ EL+++
Sbjct: 1660 LQGQVDDEQRRREEIRENYLAAEKRLAIALSESEDLAHRIEASDKHKKQLEIEQAELKSS 1719
Query: 821 IQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPT 880
+ I ++ + + + E + + ++++ + +A ++ ++ A+ D L E+
Sbjct: 1720 NTELIGNNAALSAMKRKVENEVQIARNELDEYLNELKASEERARKAAADADRLAEEVRQE 1779
Query: 881 LRNLVA--QINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVLSAHH 938
+ V + ++ N +E+ + +D+ E +FG K + ++ L A
Sbjct: 1780 QEHAVHVDRQRKSLELNAKEL----QAKIDDAERAMIQFGA--KALAKVEDRVRSLEAEL 1833
Query: 939 QSGGERSVSTIL-YLVSLQDLTNCPFRVVDEINQGMDPINER-KMFQQLVR 987
S R +I Y + F+V +E + D + E + QQ +R
Sbjct: 1834 HSEQRRHQESIKGYTKQERRARELQFQV-EEDKKAFDRLQENVEKLQQKIR 1883
Score = 105 (42.0 bits), Expect = 0.00068, Sum P(3) = 0.00068
Identities = 74/356 (20%), Positives = 148/356 (41%)
Query: 649 LIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQ 708
L E E A+ +R + I +EK K+R + ++ KRK++ I+KE D T
Sbjct: 1429 LAETEDARSDVDRHLTV-IASLEK-KQRAFDKIVDDWKRKVDDIQKEIDATTR------D 1480
Query: 709 AADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKL--AL 766
+ + + + FK + NL +I + + E + F +IR++ + Q + +
Sbjct: 1481 SRNTSTEVFKLRSSMDNLSEQIETLR---RENKI----FSQEIRDINEQITQGGRTYQEV 1533
Query: 767 QASLH-YEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFL--EMPTTIEELEAAIQD 823
S+ E K E++H ++A +AE + ++E + + E+ I+E E ++
Sbjct: 1534 HKSVRRLEQEKDELQHALDE-AEAALEAEESKVLRLQIEVQQIRSEIEKRIQEKEEEFEN 1592
Query: 824 NISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFL-----AEIDALK--EK 876
Q L+ + ++ K E D +L+ L A +DA K +K
Sbjct: 1593 TRKNHQRALESIQASLETEAKSKAELARAKKKLETDINQLEIALDHANKANVDAQKNLKK 1652
Query: 877 WLPTLRNLVAQINETFSRN--FQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVL 934
++ L Q+++ R +E +A E L S+ + I+ + QLE+
Sbjct: 1653 LFDQVKELQGQVDDEQRRREEIRENYLAAEKRLAIALSESEDLAHRIEASDKHKKQLEIE 1712
Query: 935 SAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAAS 990
A +S + L +++ ++ N+ + +NE K ++ R A+
Sbjct: 1713 QAELKSSNTELIGNNAALSAMKRKVENEVQIAR--NELDEYLNELKASEERARKAA 1766
Score = 79 (32.9 bits), Expect = 6.3e-06, Sum P(3) = 6.3e-06
Identities = 42/174 (24%), Positives = 80/174 (45%)
Query: 158 FAKLSPV--KLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNV 215
+AKLS KLLE E G A+ EK ++L + V+++ + N + +
Sbjct: 884 YAKLSAERSKLLEALELTQGGS------AAIEEKLTRLNSARQEVEKSLNDANDRLSEHE 937
Query: 216 EQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAEYIXXXXXXXXXXXXXXXXXNTLH 275
E+ D+E+ R++A+ ++VE++KK + + ++ K+ N +H
Sbjct: 938 EKNADLEKQRRKAQ--QEVENLKKSIEAVDGNLAKS------------LEEKAAKENQIH 983
Query: 276 EFSKPIEGKKQEKAILDGDCKKLSSLINENSKRRMDFLE----KVDQGVQVQGK 325
E Q++ I G K L+ EN+++ +D L+ K Q +++GK
Sbjct: 984 SLQD--EMNSQDETI--GKINKEKKLLEENNRQLVDDLQAEEAKQAQANRLRGK 1033
Score = 68 (29.0 bits), Expect = 0.00075, Sum P(3) = 0.00075
Identities = 36/146 (24%), Positives = 69/146 (47%)
Query: 108 IMRKIDTRNK--SEWF--FNGKVVPKGEVLEITKRFNI-QVNNLTQFLP--QDRVCEFAK 160
I R++ N S+W + G+ + E LE KR + +V +L + L Q++V K
Sbjct: 1364 IQRQLSRINSEISQWKARYEGEGLVGSEELEELKRKQMNRVMDLQEALSAAQNKVISLEK 1423
Query: 161 LSPVKLLEETEKAVGDPQLPVQHCALVEKSSKL--KTIECTVKRNGDTLNQLKALNVEQE 218
KLL ETE A D + A +EK + K ++ ++ D ++ A +
Sbjct: 1424 AKG-KLLAETEDARSDVDRHLTVIASLEKKQRAFDKIVDDWKRKVDDIQKEIDATTRDSR 1482
Query: 219 K---DVERVRQRAE-LLEKVESMKKK 240
+V ++R + L E++E+++++
Sbjct: 1483 NTSTEVFKLRSSMDNLSEQIETLRRE 1508
Score = 48 (22.0 bits), Expect = 6.3e-06, Sum P(3) = 6.3e-06
Identities = 12/60 (20%), Positives = 31/60 (51%)
Query: 359 TVPAYEPPHDKIEK----LGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKD 414
T+ A + KIEK L ++ ++ Q +Q+ + E+E++ Q ++ + + ++ +
Sbjct: 1213 TLDALQKSKAKIEKEKGVLQKELDDINAQVDQETKSRVEQERLAKQYEIQVAELQQKVDE 1272
Score = 48 (22.0 bits), Expect = 6.3e-06, Sum P(3) = 6.3e-06
Identities = 18/81 (22%), Positives = 37/81 (45%)
Query: 371 EKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSG 430
E+L Q +L +Q + + + SE K D++ + KNN + AL N+
Sbjct: 1155 ERLDEQNKQLEIQQDNNKKKDSEIIKFRRDLDEKNMANEDQMAMIRRKNNDQISALTNT- 1213
Query: 431 AENIFEAYCWLQQHRHELNKE 451
+ + ++ +++ + L KE
Sbjct: 1214 LDALQKSKAKIEKEKGVLQKE 1234
Score = 38 (18.4 bits), Expect = 6.2e-05, Sum P(3) = 6.2e-05
Identities = 13/59 (22%), Positives = 26/59 (44%)
Query: 398 LNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGA------ENIFEAYCWLQQHRHELNK 450
+ Q T ++ ++ +E + ++L HAL + A + +QQ R E+ K
Sbjct: 1523 ITQGGRTYQEVHKSVRRLEQEKDELQHALDEAEAALEAEESKVLRLQIEVQQIRSEIEK 1581
>UNIPROTKB|Q27991 [details] [associations]
symbol:MYH10 "Myosin-10" species:9913 "Bos taurus"
[GO:0006930 "substrate-dependent cell migration, cell extension"
evidence=ISS] [GO:0006887 "exocytosis" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0001778 "plasma membrane repair"
evidence=ISS] [GO:0001764 "neuron migration" evidence=ISS]
[GO:0001725 "stress fiber" evidence=ISS] [GO:0060041 "retina
development in camera-type eye" evidence=IEA] [GO:0055015
"ventricular cardiac muscle cell development" evidence=IEA]
[GO:0055003 "cardiac myofibril assembly" evidence=IEA] [GO:0051015
"actin filament binding" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0043531 "ADP
binding" evidence=IEA] [GO:0043197 "dendritic spine" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0032154
"cleavage furrow" evidence=IEA] [GO:0031594 "neuromuscular
junction" evidence=IEA] [GO:0030898 "actin-dependent ATPase
activity" evidence=IEA] [GO:0030496 "midbody" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0030424 "axon"
evidence=IEA] [GO:0030048 "actin filament-based movement"
evidence=IEA] [GO:0021680 "cerebellar Purkinje cell layer
development" evidence=IEA] [GO:0021678 "third ventricle
development" evidence=IEA] [GO:0021670 "lateral ventricle
development" evidence=IEA] [GO:0021592 "fourth ventricle
development" evidence=IEA] [GO:0016460 "myosin II complex"
evidence=IEA] [GO:0008360 "regulation of cell shape" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=IEA] [GO:0007512 "adult
heart development" evidence=IEA] [GO:0007411 "axon guidance"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=IEA]
[GO:0005938 "cell cortex" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0000281 "cytokinesis after mitosis" evidence=IEA] [GO:0000146
"microfilament motor activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005516 "calmodulin binding"
evidence=IEA] InterPro:IPR000048 InterPro:IPR001609
InterPro:IPR002928 InterPro:IPR004009 InterPro:IPR008989
Pfam:PF00063 Pfam:PF00612 Pfam:PF01576 Pfam:PF02736 PRINTS:PR00193
PROSITE:PS50096 SMART:SM00015 SMART:SM00242 GO:GO:0005886
GO:GO:0005524 GO:GO:0005938 GO:GO:0005737 GO:GO:0007411
GO:GO:0001764 GO:GO:0005819 GO:GO:0008360 GO:GO:0008283
GO:GO:0030424 GO:GO:0043025 GO:GO:0001701 GO:GO:0043197
GO:GO:0031594 GO:GO:0050885 GO:GO:0043531 GO:GO:0030426
GO:GO:0060041 GO:GO:0000281 GO:GO:0000146 GO:GO:0001725
GO:GO:0055003 GO:GO:0006887 GO:GO:0007512 GO:GO:0030496
GO:GO:0032154 GO:GO:0030048 GO:GO:0021670 GO:GO:0007097
eggNOG:COG5022 GO:GO:0055015 GO:GO:0021680 GO:GO:0001778
GO:GO:0006930 GO:GO:0021678 GO:GO:0021592 GO:GO:0016460
GO:GO:0030898 EMBL:AB022023 EMBL:U15716 IPI:IPI00709219
RefSeq:NP_777259.1 UniGene:Bt.4057 UniGene:Bt.92698
ProteinModelPortal:Q27991 SMR:Q27991 STRING:Q27991 PRIDE:Q27991
Ensembl:ENSBTAT00000028188 GeneID:317655 KEGG:bta:317655 CTD:4628
GeneTree:ENSGT00650000092896 HOGENOM:HOG000173958
HOVERGEN:HBG004704 InParanoid:Q27991 KO:K10352 OMA:DKNVHEL
OrthoDB:EOG4TXBR1 NextBio:20807131 SUPFAM:SSF50084 Uniprot:Q27991
Length = 1976
Score = 129 (50.5 bits), Expect = 6.6e-06, Sum P(3) = 6.6e-06
Identities = 62/271 (22%), Positives = 124/271 (45%)
Query: 644 QTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEK-EDDINTAL 702
+ ++RL+ + +L+ E E+ + +++ME + + ++E+ K D++ L
Sbjct: 1588 EEKKRLLIKQVRELEAELEDERKQRALAVASKKKMEIDLKDLEAQIEAANKARDEVIKQL 1647
Query: 703 AKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHE 762
KL Q D ++ +E + + + +EK + S+E A+I +L+ L E
Sbjct: 1648 RKLQAQMKD-----YQRELEEARASRDEIFAQSKESEKKLKSLE--AEILQLQEELASSE 1700
Query: 763 KLALQASLHYEDCKKEVEHC---RKHLSDAKRQAES-IAFITPELEKEFLEMPTTIEELE 818
+ A ++ E+ + + L D KR+ E+ IA + ELE+E + +E L
Sbjct: 1701 RARRHAEQERDELADEIANSASGKSALLDEKRRLEARIAQLEEELEEE----QSNMELLN 1756
Query: 819 AAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEID-ALKEKW 877
+ Q ++ LN + E Q+ ++ + E KELK L E++ A+K K+
Sbjct: 1757 DRFRKTTLQVDT---LNTELAAERSAAQKS-DNARQQLERQNKELKAKLQELEGAVKSKF 1812
Query: 878 LPTLRNL---VAQINETFSRNFQEMAVAGEV 905
T+ L + Q+ E + +E A A ++
Sbjct: 1813 KATISALEAKIGQLEEQLEQEAKERAAANKL 1843
Score = 115 (45.5 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 52/216 (24%), Positives = 96/216 (44%)
Query: 653 EAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALA--KLVDQAA 710
++A L ++R I Q+E+ E N L R ++ + D +NT LA + Q +
Sbjct: 1724 KSALLDEKRRLEARIAQLEEELEEEQSNMELLNDRFRKTTLQVDTLNTELAAERSAAQKS 1783
Query: 711 DLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIE-FDAKIRELEFNLKQHEKLALQAS 769
D QQ + + K L ++ + + K A+I +AKI +LE L+Q K A+
Sbjct: 1784 DNARQQLER--QNKELKAKLQELEGAVKSKFKATISALEAKIGQLEEQLEQEAKERAAAN 1841
Query: 770 LHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQAN 829
+K+++ + D +R A+ ++EK M +LE A ++ ++AN
Sbjct: 1842 KLVRRTEKKLKEIFMQVEDERRHADQYK---EQMEKANARMKQLKRQLEEA-EEEATRAN 1897
Query: 830 SIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKR 865
+ + + +E + E LS + K L+R
Sbjct: 1898 AS---RRKLQRELDDATEANEGLSREVSTLKNRLRR 1930
Score = 76 (31.8 bits), Expect = 6.6e-06, Sum P(3) = 6.6e-06
Identities = 42/163 (25%), Positives = 66/163 (40%)
Query: 85 KRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVN 144
KR +E +K +L +TK I D R + E LE KRF +
Sbjct: 1171 KREQEVAELKKALEEETKSHEAQIQ---DMRQRHATALE----ELSEQLEQAKRFKANLE 1223
Query: 145 NLTQFLPQDR---VCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVK 201
Q L D CE L VK E ++ D Q+ H A V + +L+ +E K
Sbjct: 1224 KNKQGLETDNKELACEVKVLQQVKAESEHKRKKLDAQVQELH-AKVSEGDRLR-VELAEK 1281
Query: 202 RNG--DTLNQLKALNVEQEKD-VERVRQRAELLEKVESMKKKL 241
N + L+ + L E EK ++ + A L +++ ++ L
Sbjct: 1282 ANKLQNELDNVSTLLEEAEKKGIKFAKDAAGLESQLQDTQELL 1324
Score = 63 (27.2 bits), Expect = 8.3e-05, Sum P(2) = 8.3e-05
Identities = 44/236 (18%), Positives = 88/236 (37%)
Query: 197 ECTVKRNGDTLNQLKALNVE---QEKDVERVRQR-AELLEKVESMKKKLPWLKYDMKKAE 252
E KR + KAL E E ++ +RQR A LE++ ++ K +++K +
Sbjct: 1167 ELRTKREQEVAELKKALEEETKSHEAQIQDMRQRHATALEELSEQLEQAKRFKANLEKNK 1226
Query: 253 YIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENSKRRMDF 312
L + E K+++ LD ++L + ++E + R++
Sbjct: 1227 Q-----GLETDNKELACEVKVLQQVKAESEHKRKK---LDAQVQELHAKVSEGDRLRVEL 1278
Query: 313 LEKVDQGVQVQGKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPAYEPPHDKIEK 372
EK ++ +Q + K Q + E K+
Sbjct: 1279 AEKANK---LQNELDNVSTLLEEAEKKGIKFAKDAAGLESQLQDTQEL-LQEETRQKLN- 1333
Query: 373 LGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRN 428
L S+I +L + + + Q+ E+E+ + L+ +L D + K + L + N
Sbjct: 1334 LSSRIRQLEEERSSLQEQQEEEEEARRSLEKQLQALQAQLTDTKKKVDDDLGTIEN 1389
Score = 47 (21.6 bits), Expect = 6.6e-06, Sum P(3) = 6.6e-06
Identities = 20/72 (27%), Positives = 31/72 (43%)
Query: 394 KEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGA---ENIFEAYCWLQQHRHELNK 450
+E+ QNK LR + L +D K +H L S + + E L++ EL
Sbjct: 1499 REEAERQNK-QLRADMEDLMSSKDDVGKNVHELEKSKRALEQQVEEMRTQLEELEDELQA 1557
Query: 451 EAYGPVLLEVNV 462
+ LEVN+
Sbjct: 1558 TEDAKLRLEVNM 1569
>RGD|1308791 [details] [associations]
symbol:Smc1b "structural maintenance of chromosomes 1B"
species:10116 "Rattus norvegicus" [GO:0000775 "chromosome,
centromeric region" evidence=IEA;ISO] [GO:0000795 "synaptonemal
complex" evidence=ISO] [GO:0000800 "lateral element"
evidence=IEA;ISO] [GO:0003677 "DNA binding" evidence=IEA;ISO]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA;ISO]
[GO:0007126 "meiosis" evidence=IEA;ISO] [GO:0030261 "chromosome
condensation" evidence=IEA] [GO:0030893 "meiotic cohesin complex"
evidence=ISO] [GO:0034991 "nuclear meiotic cohesin complex"
evidence=IEA;ISO] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 RGD:1308791 GO:GO:0005524 GO:GO:0007126 GO:GO:0000775
GO:GO:0003677 GO:GO:0006281 GO:GO:0006310 GO:GO:0030261
GO:GO:0000800 EMBL:CH473950 GO:GO:0007062 SUPFAM:SSF75553
GO:GO:0030893 KO:K06636 GeneTree:ENSGT00580000081569 CTD:27127
OMA:QLYHNEK OrthoDB:EOG4RNB7M IPI:IPI00372956 RefSeq:NP_001123970.1
UniGene:Rn.56972 Ensembl:ENSRNOT00000044883 GeneID:300121
KEGG:rno:300121 NextBio:646377 Uniprot:D3ZE73
Length = 1247
Score = 103 (41.3 bits), Expect = 7.4e-06, Sum P(3) = 7.4e-06
Identities = 71/387 (18%), Positives = 168/387 (43%)
Query: 644 QTEQRLIEDEAAK--LQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTA 701
Q +++L + + K +QK RE+I N+ + E+ + +E + +++ +++ + N
Sbjct: 827 QLKKKLNKIDTLKTTIQKGREDIDNLKKTEEECLKIVEE-LMVKQEQVKEVLATQSSN-- 883
Query: 702 LAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMA--SIEFDAKIRELEFNLK 759
+ K+ Q + + E+ L E+V + S +K + ++ D K+++++ +L
Sbjct: 884 IEKIHIQIEEERKKFLAVDREVGKLQKEVVIIQGSLEQKQLEKHNLLLDCKVQDIDISLM 943
Query: 760 QHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEF--LEMPTTIE-E 816
+L+ + E E E + +D + SI L +++ L+ +E
Sbjct: 944 LG---SLEDIIEVE--LTETESTQA-TADIYEKEASIQIDYSPLREDWKALQSDKEVEAH 997
Query: 817 LEAAIQDNISQANSIFFLNQNILQEYEHRQR---QIEDLSTKQEADKKELKRFLAEIDAL 873
L +Q SQ N++ L+ E+ + + ++ + EA +KE + E + +
Sbjct: 998 LTLLLQQVASQENTLLKTAAPNLRAQENLKAVRDKFQESADAFEASRKEARICRQEFEQV 1057
Query: 874 KEKWLPTLRNLVAQINETFSRNFQEMAVAGEV-SLDEHESDFDKFGILIKVKFRQSGQLE 932
K + I+ + + ++++ + E+ + + I G+
Sbjct: 1058 KRRRYDAFSQCFEHISVSIDQIYKKLCRNNSAQAFLSPENPEEPYLDGISYNCVAPGK-R 1116
Query: 933 VLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQP 992
+ + SGGE+ V+ + L ++ PF V+DE++ +D N K+ ++ SQ
Sbjct: 1117 FMPMDNLSGGEKCVAALALLFAVHSFRPAPFFVLDEVDAALDNTNIGKV-SGYIKEQSQE 1175
Query: 993 NTPQCFLLTPKLLPDLEYSEACSILNI 1019
Q +++ L + YS A +++ +
Sbjct: 1176 QF-QMIIIS---LKEEFYSRADALIGV 1198
Score = 99 (39.9 bits), Expect = 1.9e-05, Sum P(3) = 1.9e-05
Identities = 73/278 (26%), Positives = 122/278 (43%)
Query: 648 RLIEDEAAKLQKEREEIINIVQIEKRKRR---EMENHINLRKRKLESIEKEDDINTALAK 704
R E++ K Q+E ++ ++ EK+K R ++E N K+KL I D + T + K
Sbjct: 790 REFENKHVKQQQENDQ--KRLEFEKQKTRLNIQLEYSRNQLKKKLNKI---DTLKTTIQK 844
Query: 705 LVDQAADLNIQQFKYAIEIKNLLV------EIVSCKWSYAEKHMASIEFDAK---IRELE 755
+ +L + + ++ L+V E+++ + S EK IE + K + E
Sbjct: 845 GREDIDNLKKTEEECLKIVEELMVKQEQVKEVLATQSSNIEKIHIQIEEERKKFLAVDRE 904
Query: 756 FNLKQHEKLALQASLHYEDCKKEVEHCRKH--LSDAKRQAESIAFITPELEKEFLEMPTT 813
Q E + +Q SL +K++E KH L D K Q I+ + LE + +E+ T
Sbjct: 905 VGKLQKEVVIIQGSLE----QKQLE---KHNLLLDCKVQDIDISLMLGSLE-DIIEVELT 956
Query: 814 IEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDAL 873
E A D I+ +I +Y + + L + +E + L L ++ +
Sbjct: 957 ETESTQATAD-------IYEKEASIQIDYSPLREDWKALQSDKEVEA-HLTLLLQQVASQ 1008
Query: 874 KEKWLPTLR-NLVAQINETFSRN-FQEMAVAGEVSLDE 909
+ L T NL AQ N R+ FQE A A E S E
Sbjct: 1009 ENTLLKTAAPNLRAQENLKAVRDKFQESADAFEASRKE 1046
Score = 98 (39.6 bits), Expect = 7.4e-06, Sum P(3) = 7.4e-06
Identities = 63/279 (22%), Positives = 113/279 (40%)
Query: 21 GNIIEIELHNFMTF-DHLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATS 79
G++ + + NF ++ + P R +IGPNGSGKS+++ A++ +G T L R +
Sbjct: 2 GHLELLLVENFKSWRGRQVIGPFKRFTCIIGPNGSGKSNVMDALSFVMGEKTTNL-RVKN 60
Query: 80 I-----GAYV-KRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVL 133
I GA++ K S + I D+ EE T R I SE+ F K V + +
Sbjct: 61 IQELIHGAHIGKPVSSSASVTIIYVEDSGEEK-TFTRII-RGGCSEFHFGDKPVSRSVYV 118
Query: 134 EITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKL 193
+ I V + Q V + P + + E+ + ++ A +K K
Sbjct: 119 AQLENIGIIVKAQNCLVFQGTVESISMKKPKERTQFFEEISTSGEFIGEYEAKKKKLQKA 178
Query: 194 KT-IECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAE 252
+ + R + + K +E+E + E + E L K ++ L L Y+ +K
Sbjct: 179 EEDAQFHFNRKKNVAAERKHAKIEKE-EAEHYQSLLEEL-KTNKIQLMLFQLYYNEEKIN 236
Query: 253 YIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAIL 291
+ +TL I+ KK++ +L
Sbjct: 237 VLNTELEHMDRNLSVVK--DTLSHHENIIKAKKKDYGML 273
Score = 45 (20.9 bits), Expect = 7.4e-06, Sum P(3) = 7.4e-06
Identities = 16/70 (22%), Positives = 35/70 (50%)
Query: 363 YEPPHDKIEKLGSQILELG-VQANQKRLQKS--EKEKILNQNKLTLRQCSDRLKDMEDKN 419
+E +K E+L + G Q N K++++ E +K + + + + C D L+D + +
Sbjct: 398 WEQKAEK-ERLAFERRRHGDTQGNLKQIKEQIEEHKKRIEKLEEYTKTCMDCLEDKKQQE 456
Query: 420 NKLLHALRNS 429
L+ + N+
Sbjct: 457 EALIKEIDNT 466
Score = 37 (18.1 bits), Expect = 4.6e-05, Sum P(3) = 4.6e-05
Identities = 7/44 (15%), Positives = 25/44 (56%)
Query: 390 QKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAEN 433
+K ++E ++ + + R+ ++ ++ + + + L+N+G +N
Sbjct: 452 KKQQEEALIKE----IDNTKSRMSEVNEELSLIRNELQNAGIDN 491
>ZFIN|ZDB-GENE-041111-205 [details] [associations]
symbol:cenpf "centromere protein F, (mitosin)"
species:7955 "Danio rerio" [GO:0045502 "dynein binding"
evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR019513
Pfam:PF10473 ZFIN:ZDB-GENE-041111-205 GeneTree:ENSGT00700000104127
InterPro:IPR018463 InterPro:IPR018302 Pfam:PF10481 Pfam:PF10490
EMBL:BX936381 IPI:IPI00798779 Ensembl:ENSDART00000087589
Bgee:E7FFC1 Uniprot:E7FFC1
Length = 2861
Score = 128 (50.1 bits), Expect = 8.1e-06, Sum P(3) = 8.1e-06
Identities = 56/255 (21%), Positives = 115/255 (45%)
Query: 658 QKEREEIINIVQIEKRKRREMENHINLRKRKLESIEK--EDDI---NTALAKLVD-QAA- 710
++++ + +++ +RK ++++I +R+ E E+ ED I TA A+L + QA
Sbjct: 2026 ERKKNHMSQLLKAAQRKADVLQDNIEKLEREKELSEQNLEDAILQAETAKAELEEIQAET 2085
Query: 711 -DLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQAS 769
DL + + E+K+L E + +K+ E I+E LK E+ L
Sbjct: 2086 QDLTKKIEEMTSELKDLKEEKYKLEQELDQKNKLIEELQLSIQEASVKLKSAEEATLNQE 2145
Query: 770 LHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQAN 829
+D + +V + L + + ES EL L + + +E + +
Sbjct: 2146 QMIKDFQFKVGAMEEELRLFQTEVESKEVKALELASHLLSLESENKEFAQRVLEYERSQE 2205
Query: 830 SIFFLNQNILQEYEHRQRQIEDLSTK---QEADKKELKRFLAEIDALKEKWLPTLRNLVA 886
+ NQ++L+++E +Q+++ + +T+ Q A+ + L E D +K L++ +A
Sbjct: 2206 ELHSSNQSLLKDFESKQQELSEENTQLRSQIAELQALSLIREEQDEELQKDKVELQSTIA 2265
Query: 887 QINETFSRNFQEMAV 901
Q+ E +M V
Sbjct: 2266 QLEEKTQMQSTKMEV 2280
Score = 66 (28.3 bits), Expect = 8.1e-06, Sum P(3) = 8.1e-06
Identities = 40/184 (21%), Positives = 76/184 (41%)
Query: 142 QVNNLTQ--FLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLK-TIEC 198
+++NL Q L Q +V E KLL+ET K G Q Q A E + L + +
Sbjct: 711 EMDNLNQQITLTQGKVSELE----AKLLQETSKLEGMEQAHGQLLAEYESACILAMSKDS 766
Query: 199 TVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAEYIXXXX 258
++ N + L+ +++++E+ + ++L K E + + + +K
Sbjct: 767 IIEMNKTEIVHLQESFTLRDQELEKFKVEKDILAK-ECEDRLAQNKELEQQKLNTETSLM 825
Query: 259 XXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDC-KKLSSLINENSKRRMDFLEKVD 317
+ + I+GK E + + D +K+SSL KR D + +V+
Sbjct: 826 EVLAKFTLLESDLRCQKDLNAEIQGKYDELSKIKEDLVEKVSSL----EKREKDLINEVE 881
Query: 318 QGVQ 321
+Q
Sbjct: 882 SLLQ 885
Score = 62 (26.9 bits), Expect = 8.1e-06, Sum P(3) = 8.1e-06
Identities = 24/99 (24%), Positives = 43/99 (43%)
Query: 377 ILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAENIFE 436
+ E A + L K+E E N TL+ + L+ D + +L+ +L S +++ E
Sbjct: 1002 LAEKDAMAERIALIKTELETS-NNLSATLKNSLENLQTQFDSSVELISSLDMSDEKSLLE 1060
Query: 437 AYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLEDHV 475
RH E Y + E+ + H + LE+H+
Sbjct: 1061 ISIKELTERHNKESEVY---VSELETHIKKHKS-LEEHI 1095
Score = 62 (26.9 bits), Expect = 2.0e-05, Sum P(3) = 2.0e-05
Identities = 32/119 (26%), Positives = 52/119 (43%)
Query: 131 EVLEITKRFNIQVNNLTQFLPQ-DRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEK 189
E+ E+ K+ + Q + Q L + A+ +K E +K V D +L VEK
Sbjct: 528 ELTELRKKMDHQSVSSAQELENLKKTLIEAEAKNMKTQAELQKLVHDVELKENKICAVEK 587
Query: 190 SS---KLKTIECT-----VKRNGDTLNQLKALNVEQEKDVERVRQ-RAELLEKVESMKK 239
+ K+ + C +K+ D L Q K E+E+ + R ELL KV ++K
Sbjct: 588 ENEELKMTSNSCQKELAEMKKEYDALLQWKT---EKEQLINNAESNRNELLAKVADLEK 643
Score = 54 (24.1 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 27/113 (23%), Positives = 52/113 (46%)
Query: 129 KGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVE 188
K ++E+ K + + F +D+ E K+ L +E E + + ++ L
Sbjct: 764 KDSIIEMNKTEIVHLQE--SFTLRDQELEKFKVEKDILAKECEDRLAQNK-ELEQQKLNT 820
Query: 189 KSSKLKTIECTVKRNGDTLNQLKALNVE-QEKDVERVRQRAELLEKVESMKKK 240
++S ++ + D Q K LN E Q K E + + +L+EKV S++K+
Sbjct: 821 ETSLMEVLAKFTLLESDLRCQ-KDLNAEIQGKYDELSKIKEDLVEKVSSLEKR 872
Score = 48 (22.0 bits), Expect = 0.00020, Sum P(3) = 0.00020
Identities = 29/134 (21%), Positives = 54/134 (40%)
Query: 407 QCSDRLKDMEDKNNKLLHALRNSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRA 466
Q ++ D+ED ++ L +R + + QH EL ++ +L N+ N
Sbjct: 1464 QMQNKSSDIEDMSHVLKETVRTMEEQTAIQIEQLKLQHATEL--QSMEEQML--NIKNEL 1519
Query: 467 HANYLEDHVGHYIWKSFIT---QDAGDRDFLAKNLKPFDVP-ILNYVSNESSRKEPFQIS 522
A E+ I S + Q + D + +L D L + +++RK +I
Sbjct: 1520 EAKLKEEKQHTEILSSQLEATMQQLQELDIASSSLLAADTSQTLCGTNTQNTRKNVREID 1579
Query: 523 EEMR--ALGISARL 534
+M +G+S L
Sbjct: 1580 SQMVHFLIGVSVTL 1593
>UNIPROTKB|F1SS62 [details] [associations]
symbol:MYH1 "Myosin-1" species:9823 "Sus scrofa"
[GO:0031672 "A band" evidence=IEA] [GO:0014704 "intercalated disc"
evidence=IEA] [GO:0005925 "focal adhesion" evidence=IEA]
[GO:0005859 "muscle myosin complex" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003774 "motor activity" evidence=IEA] InterPro:IPR000048
InterPro:IPR001609 InterPro:IPR002928 Pfam:PF00063 Pfam:PF01576
PROSITE:PS50096 SMART:SM00015 SMART:SM00242 GO:GO:0005524
GO:GO:0014704 GO:GO:0003774 GO:GO:0031672 GO:GO:0005859
GO:GO:0032982 InterPro:IPR015650 PANTHER:PTHR13140:SF22
GeneTree:ENSGT00680000099790 OMA:QPTEEIS EMBL:CU896583
Ensembl:ENSSSCT00000019599 Uniprot:F1SS62
Length = 1470
Score = 145 (56.1 bits), Expect = 9.5e-06, P = 9.5e-06
Identities = 67/314 (21%), Positives = 147/314 (46%)
Query: 643 MQTEQRLIEDEAAKLQKEREEI-INIVQIEKRKRREMENHINLRKRKLESIEKEDDINTA 701
+ ++R +EDE ++L+K+ +++ + + ++EK K EN + ++ +++ T
Sbjct: 471 LTAKKRKLEDECSELKKDIDDLELTLAKVEKEKHAT-ENKVKNLTEEMAGLDETIAKLTK 529
Query: 702 LAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIR-ELEFNLKQ 760
K + +A + + + N L + + + S+E + K+R +LE ++
Sbjct: 530 EKKALQEAHQQTLDDLQAEEDKVNTLTKAKTKLEQQVDDLEGSLEQEKKLRMDLERAKRK 589
Query: 761 HE---KLALQASLHYEDCKKEV-EHCRK---HLSDAKRQAESIAFITPELEKEFLEMPTT 813
E KLA ++++ E+ K+++ E +K +S+ + + E + +L+K+ E+
Sbjct: 590 LEGDLKLAQESTMDIENDKQQLDEKLKKKEFEMSNLQSKIEDEQALAMQLQKKIKELQAR 649
Query: 814 IEELEAAIQ-DNISQANSIFFLNQNILQEYEHRQRQIED----------LSTKQEADKKE 862
IEELE I+ + S+A + ++ +E E ++E+ ++ K+EA+ ++
Sbjct: 650 IEELEEEIEAERASRAKAEK-QRSDLSRELEEISERLEEAGGATSAQIEMNKKREAEFQK 708
Query: 863 LKRFLAEIDALKEKWLPTLR----NLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFG 918
++R L E E TLR + VA++ E N Q + E E + + D
Sbjct: 709 MRRDLEEATLQHEATAATLRKKHADSVAELGEQID-NLQRVKQKLEKEKSEMKMEIDDLA 767
Query: 919 ILIKVKFRQSGQLE 932
++ + G LE
Sbjct: 768 SNMETVSKAKGNLE 781
>UNIPROTKB|F1P3L8 [details] [associations]
symbol:CENPF "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] InterPro:IPR019513
Pfam:PF10473 GeneTree:ENSGT00700000104127 InterPro:IPR018302
Pfam:PF10490 EMBL:AADN02012085 EMBL:AADN02012086 IPI:IPI00589215
Ensembl:ENSGALT00000038504 ArrayExpress:F1P3L8 Uniprot:F1P3L8
Length = 1538
Score = 125 (49.1 bits), Expect = 9.7e-06, Sum P(3) = 9.7e-06
Identities = 58/240 (24%), Positives = 120/240 (50%)
Query: 651 EDEAAKLQK-EREEII--NIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALA--KL 705
ED A +++ ERE I N+++ K ++ + + L+S+EK D ++ L KL
Sbjct: 722 EDSAKTIRRLEREVKIQTNLLETAKSDTDQLSGEKDHLLQNLQSLEK-DALSFRLEEEKL 780
Query: 706 VDQAADLN-----IQQFKYAIEIKNLLVEIVSCKWS-YAEKHMASI-EFDAKIRELEFNL 758
+Q ADLN + + ++ K +EI + K S Y + + E A++ + +
Sbjct: 781 QNQVADLNKEKEVLMRESEMMQSKLSALEIENSKLSRYLDGLITEKRELAARLNSAQKEV 840
Query: 759 KQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELE 818
Q + + + E +++ H + L + +R+++++ LE+E LEM E LE
Sbjct: 841 NQMREGMEKLKIKIESDERKKRHIAEKLKENERKSDALLDKVERLERE-LEMSE--ENLE 897
Query: 819 -AAIQDNISQANSIFFLNQN--ILQEYEHRQRQIEDLSTKQEA---DKKELKRFLAEIDA 872
A +Q ++A + F+ + + ++ + Q QI+DL++++E D KE + + E+++
Sbjct: 898 DAVVQLETAKAEAETFITEKEEMAEKLKCLQSQIDDLTSQKECLAKDSKEKQERILELES 957
Score = 107 (42.7 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 66/272 (24%), Positives = 121/272 (44%)
Query: 660 EREEIINIVQIE-KRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAADLNIQQFK 718
+ E+ I+ +Q E +R+++ I L + E + + D++ +++ + L Q K
Sbjct: 1170 DAEQAISKLQEEFTMERKKLAEQIQLLQEHSE--QNKIDLHLVVSEKHELTKSLGAVQ-K 1226
Query: 719 YAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYEDCKKE 778
E +N++ +S Y +K + E +E + LK+ + + + E C+++
Sbjct: 1227 ELQEKENIMKREIS---KYQDK-LLQTE-----KEHQNALKEANR---KNEIQIEACQEK 1274
Query: 779 VEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNI 838
V +S K + E + EL E T+ EL DNI N+I LN+
Sbjct: 1275 VNSLECFISSQKLEIEHLNSTKEELNNSLKEANQTLGELLKLKADNI---NTIVQLNKE- 1330
Query: 839 LQEYEHRQRQIEDLSTKQ-EADKKELKRFLAEIDAL-KEKWLPTLRNLVAQ---INETFS 893
+E+ + Q+ S KQ E +K+ L++ LA+ + L K+K L I E
Sbjct: 1331 -KEFVQSEVQLWIKSCKQMEQEKEVLQKQLADCEELLKKKDLSVSEKEGTDENAITEEIK 1389
Query: 894 RNFQEMAVAGEVSLDEHESDFDKFGILIKVKF 925
+E+ A EV E + +K+ LI VK+
Sbjct: 1390 LELEELQEAVEVKTREANENLEKYCSLI-VKY 1420
Score = 68 (29.0 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 41/219 (18%), Positives = 93/219 (42%)
Query: 364 EPPHDKIEKLGSQILELGVQAN----QKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKN 419
E K E++ + L V+ N Q + Q+ E+++ +N + ++L + +
Sbjct: 628 EQRQTKSEQVNMETHALFVEGNAEILQAKCQQLERDREINLQTIP-SSLQEQLVSVTAER 686
Query: 420 NKL--LHALRNSGAENIFEAYCWLQQHRHEL--NKEAYGPVLLEVNVSNRAHANYLEDHV 475
N + ++ + + + + Y LQ+ EL NKE + + + N LE
Sbjct: 687 NHIGQEQSVLSENKKELGQEYQKLQEKLKELETNKEDSAKTIRRLEREVKIQTNLLETA- 745
Query: 476 GHYIWKSFITQDAGDRDFLAKNLKPFDVPILNY-VSNESSRKEPFQISEEMRALGISARL 534
KS Q +G++D L +NL+ + L++ + E + + +++E L + +
Sbjct: 746 -----KSDTDQLSGEKDHLLQNLQSLEKDALSFRLEEEKLQNQVADLNKEKEVLMRESEM 800
Query: 535 DQVFDAPHAVKEVLISQFGLDSSYIGSKETDQKADNVAK 573
Q + ++ +S++ LD +E + ++ K
Sbjct: 801 MQSKLSALEIENSKLSRY-LDGLITEKRELAARLNSAQK 838
Score = 62 (26.9 bits), Expect = 9.7e-06, Sum P(3) = 9.7e-06
Identities = 25/110 (22%), Positives = 45/110 (40%)
Query: 370 IEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSD-----RLKDMEDKNNKL-- 422
+ LG + ++ + N + S L+ +LT C D ++ + K+ ++
Sbjct: 580 VVSLGKEPEKISAKHNVNKTVLSNTTDTLDDIELTKGNCHDLFLGAEIEQRQTKSEQVNM 639
Query: 423 -LHALRNSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYL 471
HAL G I +A C + E+N + L E VS A N++
Sbjct: 640 ETHALFVEGNAEILQAKCQQLERDREINLQTIPSSLQEQLVSVTAERNHI 689
Score = 60 (26.2 bits), Expect = 9.7e-06, Sum P(3) = 9.7e-06
Identities = 29/123 (23%), Positives = 55/123 (44%)
Query: 130 GEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEK 189
G +L+ K ++ + +++ P+ R+ E L ++ E+ K + + QL +Q E+
Sbjct: 254 GHILDSVKE--LRSSTPSKYNPEGRIKELEMLC--QIYEKVIKVLQN-QLHIQENMKTEE 308
Query: 190 SSKLKTIECTVKRNGDTLNQLKALNVEQEK-DVERVRQRAELLEKVESMKKKLPWLKYDM 248
++K I + +R D L L Q+K + +L E E K L +D+
Sbjct: 309 IQEMKNIMLSERREIDKLQNLSDKKEWQQKLNYLTTEMECKLAE--EGKTKNL---SFDL 363
Query: 249 KKA 251
K A
Sbjct: 364 KTA 366
>UNIPROTKB|D4ABD7 [details] [associations]
symbol:Trip11 "Protein Trip11" species:10116 "Rattus
norvegicus" [GO:0000042 "protein targeting to Golgi" evidence=IEA]
InterPro:IPR000237 PROSITE:PS50913 RGD:1586166 GO:GO:0005634
GO:GO:0005794 GeneTree:ENSGT00700000104188 GO:GO:0000042
OrthoDB:EOG4229HV IPI:IPI00368110 ProteinModelPortal:D4ABD7
Ensembl:ENSRNOT00000007061 ArrayExpress:D4ABD7 Uniprot:D4ABD7
Length = 1976
Score = 129 (50.5 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 81/364 (22%), Positives = 150/364 (41%)
Query: 652 DEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLES--IEKEDDINTALAKLVDQA 709
D+ K+++ + +Q E ++ R+ E +N ++L +E ED D+
Sbjct: 1544 DQVMLALKQKQMETSTLQNEVQRLRDKEARLNQELQRLRDHLLESEDSHTREALAAEDRE 1603
Query: 710 ADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQAS 769
A L K ++ LV S H AS++ ++ +L KQ ++ ALQ S
Sbjct: 1604 AKLR----KKVSVLEEKLVS--SSNAMENASHQASVQVESLQEQLNMVSKQRDETALQLS 1657
Query: 770 LHYEDCKK-EVEHCRKHLSDAKRQAESIAFITPELEKE---FLEMPTTIEELEA---AIQ 822
+ E K+ + + Q E A + ELEK+ E E LE ++Q
Sbjct: 1658 VSQEQVKQYAMSLTNLQMVLEHFQQEEKAMYSAELEKQNQLLTEWKKKAESLEGKVLSLQ 1717
Query: 823 DNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLR 882
+ + +AN+ + ++ + ++ QIE+L + E ++ L DA K K + +
Sbjct: 1718 ERLDEANAALDSASRLTEQLDLKEEQIEELKKQNELHQEMLD------DAQK-KLMSLVN 1770
Query: 883 NLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVLSAHHQSGG 942
+ ++++ RN + HE G ++ VK R+ ++E L A Q G
Sbjct: 1771 STEGKVDKVLMRNLF-IGHFHTPKNQRHEV-LRLMGSILGVK-RE--EMEQLFAEDQGGV 1825
Query: 943 ERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTPQCFLLTP 1002
R ++ L S + + N P R Q + + ++F + + S P+ P L
Sbjct: 1826 TRWMAGWLGGGS-KSVPNTPLR---PNQQSVFNSSFSELFVKFLETESHPSVPPPKLSVH 1881
Query: 1003 KLLP 1006
L P
Sbjct: 1882 DLKP 1885
Score = 72 (30.4 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 25/101 (24%), Positives = 56/101 (55%)
Query: 160 KLSPVKLLEETEKAVGD-----PQLPVQHCAL-VEKSSKLKTIECTVKRNGDTLNQLKAL 213
K+ ++ L+E +KA+ + Q+ + H L +EK ++K ++ T++ Q+KA
Sbjct: 923 KMQLLQSLQEQKKAMDEFKYQHEQMSITHSRLFLEKDEEIKNLQKTIE-------QIKAQ 975
Query: 214 NVEQEKDVERVRQRAELLE--KVESMKKKLPWLKYDMKKAE 252
E+ +D + + +++ + KV+S+ ++ K+D+ KAE
Sbjct: 976 LQEERQDSQT--ENSDIFQETKVQSLNIEIGSEKHDLSKAE 1014
Score = 55 (24.4 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 38/143 (26%), Positives = 63/143 (44%)
Query: 102 KEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKL 161
KE+ L I K D + S F KV + E+L V NL ++R+ ++
Sbjct: 1407 KEKDLLIKAKSDQLHSSNENFANKV-SENELLRQA------VTNL-----KERIL-ILEM 1453
Query: 162 SPVKLLEETEKAV-GDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQ--- 217
KL E EK + ++ AL E + K + + ++ + KAL EQ
Sbjct: 1454 DISKLKGENEKVIEASKGKETEYQALQETNMKFSMMLREKEFECHSMRE-KALAFEQLLK 1512
Query: 218 EKDVERVRQRAELLEKVESMKKK 240
EK+ + + +LL V+SM++K
Sbjct: 1513 EKEQGKAGELNQLLNAVKSMQEK 1535
Score = 55 (24.4 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 33/163 (20%), Positives = 67/163 (41%)
Query: 165 KLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERV 224
+L E+ +AV P+ P + E S+L + T+K D L + + Q+ ++
Sbjct: 868 RLREQQSRAVPVPE-PRTLDSTTELESELSQLH-TIK---DHLEE--EIKHHQKMIEDQN 920
Query: 225 RQRAELLEKVESMKKKLPWLKYDMKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGK 284
+ + +LL+ ++ KK + KY ++ I T+ + ++ +
Sbjct: 921 QNKMQLLQSLQEQKKAMDEFKYQHEQMS-ITHSRLFLEKDEEIKNLQKTIEQIKAQLQEE 979
Query: 285 KQEKAILDGDC---KKLSSLINENSKRRMDFLEKVDQGVQVQG 324
+Q+ + D K+ SL E + D L K + V+G
Sbjct: 980 RQDSQTENSDIFQETKVQSLNIEIGSEKHD-LSKAETERLVKG 1021
>UNIPROTKB|F1NYR4 [details] [associations]
symbol:CENPF "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] InterPro:IPR019513
Pfam:PF10473 GeneTree:ENSGT00700000104127 InterPro:IPR018302
Pfam:PF10490 EMBL:AADN02012085 EMBL:AADN02012086 IPI:IPI01017279
Ensembl:ENSGALT00000015770 ArrayExpress:F1NYR4 Uniprot:F1NYR4
Length = 1625
Score = 125 (49.1 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 58/240 (24%), Positives = 120/240 (50%)
Query: 651 EDEAAKLQK-EREEII--NIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALA--KL 705
ED A +++ ERE I N+++ K ++ + + L+S+EK D ++ L KL
Sbjct: 737 EDSAKTIRRLEREVKIQTNLLETAKSDTDQLSGEKDHLLQNLQSLEK-DALSFRLEEEKL 795
Query: 706 VDQAADLN-----IQQFKYAIEIKNLLVEIVSCKWS-YAEKHMASI-EFDAKIRELEFNL 758
+Q ADLN + + ++ K +EI + K S Y + + E A++ + +
Sbjct: 796 QNQVADLNKEKEVLMRESEMMQSKLSALEIENSKLSRYLDGLITEKRELAARLNSAQKEV 855
Query: 759 KQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELE 818
Q + + + E +++ H + L + +R+++++ LE+E LEM E LE
Sbjct: 856 NQMREGMEKLKIKIESDERKKRHIAEKLKENERKSDALLDKVERLERE-LEMSE--ENLE 912
Query: 819 -AAIQDNISQANSIFFLNQN--ILQEYEHRQRQIEDLSTKQEA---DKKELKRFLAEIDA 872
A +Q ++A + F+ + + ++ + Q QI+DL++++E D KE + + E+++
Sbjct: 913 DAVVQLETAKAEAETFITEKEEMAEKLKCLQSQIDDLTSQKECLAKDSKEKQERILELES 972
Score = 107 (42.7 bits), Expect = 0.00020, Sum P(3) = 0.00020
Identities = 66/272 (24%), Positives = 121/272 (44%)
Query: 660 EREEIINIVQIE-KRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAADLNIQQFK 718
+ E+ I+ +Q E +R+++ I L + E + + D++ +++ + L Q K
Sbjct: 1185 DAEQAISKLQEEFTMERKKLAEQIQLLQEHSE--QNKIDLHLVVSEKHELTKSLGAVQ-K 1241
Query: 719 YAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYEDCKKE 778
E +N++ +S Y +K + E +E + LK+ + + + E C+++
Sbjct: 1242 ELQEKENIMKREIS---KYQDK-LLQTE-----KEHQNALKEANR---KNEIQIEACQEK 1289
Query: 779 VEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNI 838
V +S K + E + EL E T+ EL DNI N+I LN+
Sbjct: 1290 VNSLECFISSQKLEIEHLNSTKEELNNSLKEANQTLGELLKLKADNI---NTIVQLNKE- 1345
Query: 839 LQEYEHRQRQIEDLSTKQ-EADKKELKRFLAEIDAL-KEKWLPTLRNLVAQ---INETFS 893
+E+ + Q+ S KQ E +K+ L++ LA+ + L K+K L I E
Sbjct: 1346 -KEFVQSEVQLWIKSCKQMEQEKEVLQKQLADCEELLKKKDLSVSEKEGTDENAITEEIK 1404
Query: 894 RNFQEMAVAGEVSLDEHESDFDKFGILIKVKF 925
+E+ A EV E + +K+ LI VK+
Sbjct: 1405 LELEELQEAVEVKTREANENLEKYCSLI-VKY 1435
Score = 68 (29.0 bits), Expect = 0.00020, Sum P(3) = 0.00020
Identities = 41/219 (18%), Positives = 93/219 (42%)
Query: 364 EPPHDKIEKLGSQILELGVQAN----QKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKN 419
E K E++ + L V+ N Q + Q+ E+++ +N + ++L + +
Sbjct: 643 EQRQTKSEQVNMETHALFVEGNAEILQAKCQQLERDREINLQTIP-SSLQEQLVSVTAER 701
Query: 420 NKL--LHALRNSGAENIFEAYCWLQQHRHEL--NKEAYGPVLLEVNVSNRAHANYLEDHV 475
N + ++ + + + + Y LQ+ EL NKE + + + N LE
Sbjct: 702 NHIGQEQSVLSENKKELGQEYQKLQEKLKELETNKEDSAKTIRRLEREVKIQTNLLETA- 760
Query: 476 GHYIWKSFITQDAGDRDFLAKNLKPFDVPILNY-VSNESSRKEPFQISEEMRALGISARL 534
KS Q +G++D L +NL+ + L++ + E + + +++E L + +
Sbjct: 761 -----KSDTDQLSGEKDHLLQNLQSLEKDALSFRLEEEKLQNQVADLNKEKEVLMRESEM 815
Query: 535 DQVFDAPHAVKEVLISQFGLDSSYIGSKETDQKADNVAK 573
Q + ++ +S++ LD +E + ++ K
Sbjct: 816 MQSKLSALEIENSKLSRY-LDGLITEKRELAARLNSAQK 853
Score = 62 (26.9 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 25/110 (22%), Positives = 45/110 (40%)
Query: 370 IEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSD-----RLKDMEDKNNKL-- 422
+ LG + ++ + N + S L+ +LT C D ++ + K+ ++
Sbjct: 595 VVSLGKEPEKISAKHNVNKTVLSNTTDTLDDIELTKGNCHDLFLGAEIEQRQTKSEQVNM 654
Query: 423 -LHALRNSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYL 471
HAL G I +A C + E+N + L E VS A N++
Sbjct: 655 ETHALFVEGNAEILQAKCQQLERDREINLQTIPSSLQEQLVSVTAERNHI 704
Score = 60 (26.2 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 29/123 (23%), Positives = 55/123 (44%)
Query: 130 GEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEK 189
G +L+ K ++ + +++ P+ R+ E L ++ E+ K + + QL +Q E+
Sbjct: 269 GHILDSVKE--LRSSTPSKYNPEGRIKELEMLC--QIYEKVIKVLQN-QLHIQENMKTEE 323
Query: 190 SSKLKTIECTVKRNGDTLNQLKALNVEQEK-DVERVRQRAELLEKVESMKKKLPWLKYDM 248
++K I + +R D L L Q+K + +L E E K L +D+
Sbjct: 324 IQEMKNIMLSERREIDKLQNLSDKKEWQQKLNYLTTEMECKLAE--EGKTKNL---SFDL 378
Query: 249 KKA 251
K A
Sbjct: 379 KTA 381
>CGD|CAL0004744 [details] [associations]
symbol:orf19.6712 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0030137 "COPI-coated vesicle" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] CGD:CAL0004744
EMBL:AACQ01000029 EMBL:AACQ01000028 eggNOG:NOG127593
InterPro:IPR022092 InterPro:IPR022091 Pfam:PF12329 Pfam:PF12325
RefSeq:XP_719695.1 RefSeq:XP_719812.1 GeneID:3638453 GeneID:3638566
KEGG:cal:CaO19.14004 KEGG:cal:CaO19.6712 Uniprot:Q5ADY0
Length = 658
Score = 140 (54.3 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 71/279 (25%), Positives = 123/279 (44%)
Query: 651 EDEAAKLQKEREEIINIVQIEKRKRREMENH-INLRKRKLESIEKEDDINTALAKLVDQA 709
ED+ L + E I +++E + NH N K + + I K + + +L +
Sbjct: 85 EDQKPDLDLQME--IERLKLENSALTKKLNHKSNFDKERNDLIAKLASKDETIEQLRKEG 142
Query: 710 ADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHE-KLALQA 768
L++++ K IK L + + + + + S E K+ EL LK H+ K Q
Sbjct: 143 EALSLKELKLNESIKKLKLANQDLEENIRDYSVKSEESSMKLEELTDFLKTHKFKTIDQV 202
Query: 769 SLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQA 828
YE+ KE+E + L ++ E ++ E+ + EE AA ++ + +
Sbjct: 203 VSKYEEVVKELEVAKAGLENSHTW-----------ETKYNELVVSHEEANAAKKELLKET 251
Query: 829 NSIFFLNQNILQ-----EYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRN 883
N + + N+L+ E E + I++L ++ A K+ F EI L++K + TLR
Sbjct: 252 NEVK-IELNMLKRQHKLEIESKNATIKELKSQMSASKQS---FAQEISRLEDK-IETLR- 305
Query: 884 LVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIK 922
L + NET S N E G+V DE + IL K
Sbjct: 306 LENESNETVSENVNE---DGKVDFDEFSKLSEAHRILQK 341
>UNIPROTKB|Q5ADY0 [details] [associations]
symbol:CaO19.14004 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] CGD:CAL0004744 EMBL:AACQ01000029 EMBL:AACQ01000028
eggNOG:NOG127593 InterPro:IPR022092 InterPro:IPR022091 Pfam:PF12329
Pfam:PF12325 RefSeq:XP_719695.1 RefSeq:XP_719812.1 GeneID:3638453
GeneID:3638566 KEGG:cal:CaO19.14004 KEGG:cal:CaO19.6712
Uniprot:Q5ADY0
Length = 658
Score = 140 (54.3 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 71/279 (25%), Positives = 123/279 (44%)
Query: 651 EDEAAKLQKEREEIINIVQIEKRKRREMENH-INLRKRKLESIEKEDDINTALAKLVDQA 709
ED+ L + E I +++E + NH N K + + I K + + +L +
Sbjct: 85 EDQKPDLDLQME--IERLKLENSALTKKLNHKSNFDKERNDLIAKLASKDETIEQLRKEG 142
Query: 710 ADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHE-KLALQA 768
L++++ K IK L + + + + + S E K+ EL LK H+ K Q
Sbjct: 143 EALSLKELKLNESIKKLKLANQDLEENIRDYSVKSEESSMKLEELTDFLKTHKFKTIDQV 202
Query: 769 SLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQA 828
YE+ KE+E + L ++ E ++ E+ + EE AA ++ + +
Sbjct: 203 VSKYEEVVKELEVAKAGLENSHTW-----------ETKYNELVVSHEEANAAKKELLKET 251
Query: 829 NSIFFLNQNILQ-----EYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRN 883
N + + N+L+ E E + I++L ++ A K+ F EI L++K + TLR
Sbjct: 252 NEVK-IELNMLKRQHKLEIESKNATIKELKSQMSASKQS---FAQEISRLEDK-IETLR- 305
Query: 884 LVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIK 922
L + NET S N E G+V DE + IL K
Sbjct: 306 LENESNETVSENVNE---DGKVDFDEFSKLSEAHRILQK 341
>UNIPROTKB|O96133 [details] [associations]
symbol:PFB0145c "Uncharacterized protein PFB0145c"
species:36329 "Plasmodium falciparum 3D7" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=NAS] [GO:0016020 "membrane" evidence=NAS] GO:GO:0005737
GO:GO:0016020 eggNOG:NOG12793 EMBL:AE001362 PIR:C71622
RefSeq:XP_001349543.1 ProteinModelPortal:O96133 IntAct:O96133
MINT:MINT-1670703 EnsemblProtists:PFB0145c:mRNA GeneID:812625
KEGG:pfa:PFB0145c EuPathDB:PlasmoDB:PF3D7_0203000 OMA:NTLNEQN
ProtClustDB:CLSZ2514744 Uniprot:O96133
Length = 1979
Score = 96 (38.9 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
Identities = 61/285 (21%), Positives = 128/285 (44%)
Query: 649 LIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQ 708
L++D++ + K++E IN+ + E++ ++ ++ I + +L + T L L
Sbjct: 1048 LLKDKSKEKIKDKENQINVEKNEEKDLKKKDDEIRILNEELVKYK------TILYNLKKD 1101
Query: 709 AADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQ--HEKLAL 766
L Q I+I +L + C E+H+ +++D +I + NL Q +E +L
Sbjct: 1102 PL-LQNQDLLSKIDINSLTINEGMCV-DKIEEHI--LDYDEEINKSRSNLFQLKNEICSL 1157
Query: 767 QASLHYEDCKKE-----------VEHCRKHLS-DAKRQAESIAFITPELEKEFLEMPTTI 814
+ + KK V+ +K L D ++Q + I + +L K ++
Sbjct: 1158 TTEVMELNNKKNELIEENNKLNLVDQGKKKLKKDVEKQKKEIEKLNKQLTKCNKQIDELN 1217
Query: 815 EELEAAIQDNI------SQANSIFFLNQN-ILQEYEHRQRQIEDLSTKQEADKKELKRFL 867
EE+E +NI + N+ F + +N ++ + + + I+ + +K + +KE+K
Sbjct: 1218 EEVEKLNNENIELITYSNDLNNKFDMKENNLMMKLDENEDNIKKMKSKIDDMEKEIKYRE 1277
Query: 868 AEIDALKEKWLPTLRNLVAQINETFSRNFQEMAVA-GEVSLDEHE 911
E K++ L + NL + NE + EM + G++ + E
Sbjct: 1278 DE----KKRNLNEINNLKKK-NEDMCIKYNEMNIKYGDICVKYEE 1317
Score = 87 (35.7 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 53/249 (21%), Positives = 115/249 (46%)
Query: 651 EDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDD----INTALAK-- 704
+ A ++ +++ I + K K ++ EN IN+ K + + ++K+DD +N L K
Sbjct: 1033 QSNAQQVDHKKKSWILLKDKSKEKIKDKENQINVEKNEEKDLKKKDDEIRILNEELVKYK 1092
Query: 705 --LVDQAAD--LNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQ 760
L + D L Q I+I +L + C E+H+ +++D +I + NL Q
Sbjct: 1093 TILYNLKKDPLLQNQDLLSKIDINSLTINEGMCV-DKIEEHI--LDYDEEINKSRSNLFQ 1149
Query: 761 --HEKLALQAS-LHYEDCKKEV--EHCRKHLSDA--KRQAESIAFITPELEKEFLEMPTT 813
+E +L + + K E+ E+ + +L D K+ + + E+EK ++
Sbjct: 1150 LKNEICSLTTEVMELNNKKNELIEENNKLNLVDQGKKKLKKDVEKQKKEIEKLNKQLTKC 1209
Query: 814 IEELEAAIQDNISQANSIFFLNQNI-LQEYEHRQRQIED-----LSTKQEADKKELKRFL 867
++++ + + + + N N+NI L Y + D L K + ++ +K+
Sbjct: 1210 NKQIDE-LNEEVEKLN-----NENIELITYSNDLNNKFDMKENNLMMKLDENEDNIKKMK 1263
Query: 868 AEIDALKEK 876
++ID ++++
Sbjct: 1264 SKIDDMEKE 1272
Score = 84 (34.6 bits), Expect = 0.00021, Sum P(3) = 0.00021
Identities = 67/342 (19%), Positives = 150/342 (43%)
Query: 653 EAAKLQKEREEII---NIVQIEKRKRREMENHINLRKRKLESIEKE-DDINTALAKLVDQ 708
E +L ++ E+I N + + + +++++ + +K+++E + K+ N + +L ++
Sbjct: 1160 EVMELNNKKNELIEENNKLNLVDQGKKKLKKDVEKQKKEIEKLNKQLTKCNKQIDELNEE 1219
Query: 709 AADLN---IQQFKYAIEIKN---LLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHE 762
LN I+ Y+ ++ N + + K E ++ ++ +KI ++E +K E
Sbjct: 1220 VEKLNNENIELITYSNDLNNKFDMKENNLMMKLDENEDNIKKMK--SKIDDMEKEIKYRE 1277
Query: 763 KLALQASLHYEDCKKEVEH-CRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAI 821
+ + KK+ E C K+ ++ + I E+ + E E+++
Sbjct: 1278 DEKKRNLNEINNLKKKNEDMCIKY-NEMNIKYGDICVKYEEMSLTYKETSLKYEQIKVKY 1336
Query: 822 QDNISQANSIFFLNQNILQEYEHRQRQIEDLS----TKQEADKKELKRFLAEIDALKEKW 877
+ SQ + I F +Y+ ++ L T + D K + R EI ++ K
Sbjct: 1337 DEKCSQYDEIRFQYDEKCFQYDEINKKYGALLNINITNKMVDSK-VDRNNNEIISVDNK- 1394
Query: 878 LPTLRNLVAQINETFSRNFQEMAVAGEVS----LDEHESDFDKFGILIKVKFRQSGQLEV 933
+ + N + QI F N + + + GE++ L +E + +K I +K Q QL
Sbjct: 1395 VEGIANYLKQI---FELNEEIIRLKGEINKISLLYSNELN-EKNSYDINMKHIQE-QLLF 1449
Query: 934 LSAHHQSGGERSVS-TILYLVSLQDLTN----CPFRVVDEIN 970
L ++ E+ ++ T Y + + ++ C + VD++N
Sbjct: 1450 LEKTNKENEEKIINLTSQYSDAYKKKSDESKLCGAQFVDDVN 1491
Score = 83 (34.3 bits), Expect = 0.00027, Sum P(3) = 0.00027
Identities = 45/233 (19%), Positives = 102/233 (43%)
Query: 651 EDEAAKLQKEREEIINIVQI-EKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQA 709
ED K++ + +++ ++ E K+R + NL+K+ + K +++N + +
Sbjct: 1256 EDNIKKMKSKIDDMEKEIKYREDEKKRNLNEINNLKKKNEDMCIKYNEMNIKYGDICVKY 1315
Query: 710 ADLNIQQFKYAIEIKNLLVEI-VSCKWSYAEKHMASIEFDAKIREL-EFNLKQHEKLALQ 767
++++ + +++ + + V+ C Y E ++D K + E N K L +
Sbjct: 1316 EEMSLTYKETSLKYEQIKVKYDEKCS-QYDE---IRFQYDEKCFQYDEINKKYGALLNIN 1371
Query: 768 ASLHYEDCKKEVEHCRKHLSDAKRQAESIA-FITP--ELEKEFLEMPTTIEELEAAIQDN 824
+ D K V+ + + E IA ++ EL +E + + I ++ +
Sbjct: 1372 ITNKMVDSK--VDRNNNEIISVDNKVEGIANYLKQIFELNEEIIRLKGEINKISLLYSNE 1429
Query: 825 ISQANSIFFLNQNILQEYEHRQRQIEDLS-TKQEADKKELKRFLAEIDALKEK 876
+++ NS + +N +H Q Q+ L T +E ++K + DA K+K
Sbjct: 1430 LNEKNS-YDINM------KHIQEQLLFLEKTNKENEEKIINLTSQYSDAYKKK 1475
Score = 81 (33.6 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
Identities = 40/167 (23%), Positives = 78/167 (46%)
Query: 85 KRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGK---VVPKGEVLEITKRFNI 141
K E+ ++K + ++E+L +++D NK E N K ++ K E ++ +
Sbjct: 178 KLKEKEDFVKQKIDMLNEKENLLQEKELDI-NKREKKINEKEKNIIKKEETFHNIEKEYL 236
Query: 142 QVNNLTQFLPQDRVCEFAK-LSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTV 200
+ N + + + + + K L +K+ E EK L + L+ K + LK ++ V
Sbjct: 237 EKNKERETISIE-IIDIKKHLEKLKI-EIKEKK---EDLENLNKKLLSKENVLKELKGCV 291
Query: 201 KRNGDTLNQLKALNVEQEK-------DVERVRQRAELLEKVESMKKK 240
K +T+N L +E+EK ++E ++ +LL K E K+K
Sbjct: 292 KEKNETINSLNDNIIEKEKKYKLLEYELEEKNKQIDLLNKQEKEKEK 338
Score = 81 (33.6 bits), Expect = 0.00043, Sum P(3) = 0.00043
Identities = 58/288 (20%), Positives = 122/288 (42%)
Query: 650 IEDEAAKLQKEREE--IINIVQIEKRKRR--EMENHIN------LRKRKLESIEKEDDIN 699
IED++ +L+K+ E+ + +IE++ ++ E+ N I L +K + ++ D
Sbjct: 984 IEDKSHELKKKHEKDLLSKDKEIEEKNKKIKELNNDIKKLQDEILVYKKQSNAQQVDHKK 1043
Query: 700 TALAKLVDQAADLNIQQFKYAIEI-KNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNL 758
+ L D++ + I+ + I + KN E K E + + E K + + +NL
Sbjct: 1044 KSWILLKDKSKE-KIKDKENQINVEKN---EEKDLKKKDDEIRILNEEL-VKYKTILYNL 1098
Query: 759 KQHEKLALQASLHYEDCKK----E---VEHCRKHLSDAKRQAESIAFITPELEKEFLEMP 811
K+ L Q L D E V+ +H+ D + +L+ E +
Sbjct: 1099 KKDPLLQNQDLLSKIDINSLTINEGMCVDKIEEHILDYDEEINKSRSNLFQLKNEICSLT 1158
Query: 812 TTIEELEAAIQDNISQANSIFFLNQN---ILQEYEHRQRQIEDLSTKQEADKKELKRFLA 868
T + EL + I + N + ++Q + ++ E ++++IE L+ + K++
Sbjct: 1159 TEVMELNNKKNELIEENNKLNLVDQGKKKLKKDVEKQKKEIEKLNKQLTKCNKQIDELNE 1218
Query: 869 EIDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDK 916
E++ L + + + +N F + + LDE+E + K
Sbjct: 1219 EVEKLNNENIELI-TYSNDLNNKFDMKENNLMM----KLDENEDNIKK 1261
Score = 73 (30.8 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
Identities = 42/210 (20%), Positives = 88/210 (41%)
Query: 274 LHEFSKPIEGKKQEKAILDGDCKKLSSLINENSKRRMDFLEKVDQGVQVQGKYKXXXXXX 333
+ E + I K+EK L+ LS+ I+ + R+M+ EK ++ ++ + KYK
Sbjct: 611 ISELNVQIMDLKEEKDFLNNQIVDLSNQIDLLT-RKME--EKENKMLEQENKYKQEMELL 667
Query: 334 XXXXXXXXXILKARXXXXXXXXXXQTVPAYEPPHDKIEKLGSQILELGVQANQKRLQKSE 393
IL ++ E K E+ ++ EL + + + +E
Sbjct: 668 RGNIKSSENILN-NDEEVCDLKRKLSLKESEMKMMK-EEHDKKLAELKDDCDVRIREMNE 725
Query: 394 KEKILNQNKLTL--RQCSDRLKDMEDKNNKLLHALRNSGAENIFEAYCWLQQHRHELN-- 449
K N++K+ + + D++ ++++N ++ L+ + I +++ H++N
Sbjct: 726 K----NEDKINMLKEEYEDKINTLKEQNEDKINTLKEQNEDKINTLK---EEYEHKINTM 778
Query: 450 KEAYGPVLLEVNVSNRAHANYLEDHVGHYI 479
KE Y + +N N N L + H I
Sbjct: 779 KEEYEHKINTLNEQNEHKINTLNEQNEHKI 808
Score = 59 (25.8 bits), Expect = 0.00031, Sum P(3) = 0.00031
Identities = 25/61 (40%), Positives = 32/61 (52%)
Query: 368 DKI--EK--LGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRL-KDMEDKNNKL 422
DK+ EK L S+I EL VQ K EK+ LN + L D L + ME+K NK+
Sbjct: 598 DKLNNEKGTLNSKISELNVQIMDL---KEEKD-FLNNQIVDLSNQIDLLTRKMEEKENKM 653
Query: 423 L 423
L
Sbjct: 654 L 654
Score = 54 (24.1 bits), Expect = 0.00096, Sum P(3) = 0.00096
Identities = 24/114 (21%), Positives = 49/114 (42%)
Query: 364 EPPHDKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKL-TLRQ-CSDRLKDMEDKNNK 421
E DKI L + + ++ K K N++K+ TL++ ++ M+++
Sbjct: 725 EKNEDKINMLKEEYEDKINTLKEQNEDKINTLKEQNEDKINTLKEEYEHKINTMKEEYE- 783
Query: 422 LLHALRNSGAENIFEAYCWLQQHRHELN--KEAYGPVLLEVNVSNRAHANYLED 473
H + +N + +Q+ H++N KE Y + +N N N L++
Sbjct: 784 --HKINTLNEQNEHKINTLNEQNEHKINTMKEEYEDKMNTLNEQNEDKMNSLKE 835
>UNIPROTKB|F2Z5G2 [details] [associations]
symbol:SMC3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0036033 "mediator complex binding" evidence=IEA] [GO:0034991
"nuclear meiotic cohesin complex" evidence=IEA] [GO:0032876
"negative regulation of DNA endoreduplication" evidence=IEA]
[GO:0019827 "stem cell maintenance" evidence=IEA] [GO:0016363
"nuclear matrix" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0007126 "meiosis" evidence=IEA] [GO:0007052
"mitotic spindle organization" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA] [GO:0000800
"lateral element" evidence=IEA] [GO:0000785 "chromatin"
evidence=IEA] [GO:0051276 "chromosome organization" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR010935
Pfam:PF06470 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0007126 GO:GO:0005737 GO:GO:0007165
GO:GO:0007052 GO:GO:0000785 GO:GO:0016363 GO:GO:0000922
GO:GO:0032876 GO:GO:0051276 GO:GO:0000800 SUPFAM:SSF75553
GO:GO:0030893 OMA:NKVLEHF GeneTree:ENSGT00580000081628
EMBL:CT737341 EMBL:CU468424 Ensembl:ENSSSCT00000011621
Uniprot:F2Z5G2
Length = 934
Score = 132 (51.5 bits), Expect = 1.4e-05, Sum P(3) = 1.4e-05
Identities = 86/365 (23%), Positives = 151/365 (41%)
Query: 643 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRRE-MENHIN-LRKRK----LESIEKE- 695
+Q E R + +E KL+ + + RKR + +E +N LR+ + L + E
Sbjct: 524 LQQENRQLLNERIKLEGIITRVETYLNENLRKRLDQVEQELNELRETEGGTVLTATTSEL 583
Query: 696 DDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEK-HMASIEFDAKIREL 754
+ IN + + ++ DL+ K IK L + +W EK HM +I D K EL
Sbjct: 584 EAINKRVKDTMARSEDLDNSIDKTEAGIKELQKSME--RWKNMEKEHMDAINHDTK--EL 639
Query: 755 EFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDA--KRQAESIAFITPELEKEFLEMPT 812
E + + + L+ E+C K++ +A K Q S+ + +LE+ E+
Sbjct: 640 E-KMTNRQGMLLKKK---EECMKKIRELGSLPQEAFEKYQTLSLKQLFRKLEQCNTELKK 695
Query: 813 TIEELEAAIQD--NISQANSIFFLNQNILQE-YEHRQRQIEDLST-KQEADKKELKRFLA 868
+ A+ N S+ Q L Y+ + L K EA + K+
Sbjct: 696 YSHVNKKALDQFVNFSEQKEKLIKRQEELDRGYKSIMELMNVLELRKYEAIQLTFKQVSK 755
Query: 869 EIDALKEKWLP----TLRNLVAQINETFSRNFQEMAVAGEVSLDEHES--DFDKF-GILI 921
+ +K +P TL + + S++ E + E S D+F G+ I
Sbjct: 756 NFSEVFQKLVPGGKATLVMKKGDVEGSQSQDEGEGSGESERGSGSQSSVPSVDQFTGVGI 815
Query: 922 KVKFRQSGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKM 981
+V F Q E+ SGG++S+ + + ++Q PF + DEI+Q +D RK
Sbjct: 816 RVSFTGK-QGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFYLFDEIDQALDA-QHRKA 873
Query: 982 FQQLV 986
++
Sbjct: 874 VSDMI 878
Score = 54 (24.1 bits), Expect = 1.4e-05, Sum P(3) = 1.4e-05
Identities = 15/37 (40%), Positives = 25/37 (67%)
Query: 205 DTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKL 241
D ++L A N EQ K + +++R +LLEK+E +K+L
Sbjct: 28 DLQDEL-AGNSEQRKRL--LKERQKLLEKIEEKQKEL 61
Score = 52 (23.4 bits), Expect = 1.4e-05, Sum P(3) = 1.4e-05
Identities = 33/165 (20%), Positives = 75/165 (45%)
Query: 370 IEKLGSQILELGVQANQKRLQ----KSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHA 425
IE++ ++I +L Q Q Q K+ ++ IL++ K+ LK+ ++ K
Sbjct: 421 IERINNEIDQLMNQMQQIETQQRKFKASRDSILSEMKM--------LKEKRQQSEKTFMP 472
Query: 426 LRNSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLEDHVGHYIWKSFIT 485
+ S +++ + ++ R L E +L ++++ ++ + L D + +
Sbjct: 473 KQRS-LQSLEASLHAMESTRESLKAELGTDLLSQLSLEDQKRVDALNDEIRQ------LQ 525
Query: 486 QDAGDRDFLAKNLKPFDV--PILNYVSNESSRKEPFQISEEMRAL 528
Q+ +R L + +K + + Y+ NE+ RK Q+ +E+ L
Sbjct: 526 QE--NRQLLNERIKLEGIITRVETYL-NENLRKRLDQVEQELNEL 567
Score = 46 (21.3 bits), Expect = 8.5e-05, Sum P(3) = 8.5e-05
Identities = 21/77 (27%), Positives = 39/77 (50%)
Query: 168 EETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQR 227
EE E+ + Q ++ +E K K ++ + N + Q K L E++K +E++ ++
Sbjct: 3 EEKEQLSAERQEQIKQRTKLEL--KAKDLQDELAGNSE---QRKRLLKERQKLLEKIEEK 57
Query: 228 A-ELLE---KVESMKKK 240
EL E K S+K+K
Sbjct: 58 QKELAETEPKFNSVKEK 74
Score = 37 (18.1 bits), Expect = 0.00065, Sum P(3) = 0.00065
Identities = 13/62 (20%), Positives = 35/62 (56%)
Query: 192 KLKTIECTV---KRNGDTLNQ-LKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYD 247
+LK+++ + KR +++ L+ +EK++E+ + + L +V++ ++L Y+
Sbjct: 115 ELKSLDQAINDKKRQIAAIHKDLEDTEANKEKNLEQYNKLDQDLNEVKARVEELDRKYYE 174
Query: 248 MK 249
+K
Sbjct: 175 VK 176
>MGI|MGI:1930780 [details] [associations]
symbol:Myh10 "myosin, heavy polypeptide 10, non-muscle"
species:10090 "Mus musculus" [GO:0000146 "microfilament motor
activity" evidence=ISO] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000281 "cytokinesis after mitosis"
evidence=ISO;IMP] [GO:0001701 "in utero embryonic development"
evidence=IMP] [GO:0001725 "stress fiber" evidence=ISO;IDA;IMP]
[GO:0001764 "neuron migration" evidence=IMP] [GO:0001778 "plasma
membrane repair" evidence=IMP] [GO:0003774 "motor activity"
evidence=IEA] [GO:0003779 "actin binding" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005516 "calmodulin binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO;IDA] [GO:0005819 "spindle" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0005938 "cell
cortex" evidence=ISO;IDA] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006887 "exocytosis" evidence=IMP] [GO:0006930
"substrate-dependent cell migration, cell extension" evidence=IMP]
[GO:0007097 "nuclear migration" evidence=IMP] [GO:0007409
"axonogenesis" evidence=IMP] [GO:0007411 "axon guidance"
evidence=IMP] [GO:0007420 "brain development" evidence=IMP]
[GO:0007512 "adult heart development" evidence=IMP] [GO:0008152
"metabolic process" evidence=ISO] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0008360 "regulation of cell shape" evidence=IMP]
[GO:0016459 "myosin complex" evidence=IDA] [GO:0016460 "myosin II
complex" evidence=IDA] [GO:0021592 "fourth ventricle development"
evidence=IMP] [GO:0021670 "lateral ventricle development"
evidence=IMP] [GO:0021678 "third ventricle development"
evidence=IMP] [GO:0021680 "cerebellar Purkinje cell layer
development" evidence=IMP] [GO:0030036 "actin cytoskeleton
organization" evidence=IGI] [GO:0030048 "actin filament-based
movement" evidence=ISO] [GO:0030239 "myofibril assembly"
evidence=IMP] [GO:0030424 "axon" evidence=IDA] [GO:0030426 "growth
cone" evidence=IDA] [GO:0030496 "midbody" evidence=ISO] [GO:0030898
"actin-dependent ATPase activity" evidence=ISO] [GO:0031175 "neuron
projection development" evidence=IMP] [GO:0031594 "neuromuscular
junction" evidence=IDA] [GO:0032154 "cleavage furrow" evidence=ISO]
[GO:0043005 "neuron projection" evidence=IDA] [GO:0043025 "neuronal
cell body" evidence=IDA] [GO:0043197 "dendritic spine"
evidence=IDA] [GO:0043531 "ADP binding" evidence=ISO] [GO:0050885
"neuromuscular process controlling balance" evidence=IMP]
[GO:0051015 "actin filament binding" evidence=ISO] [GO:0055003
"cardiac myofibril assembly" evidence=IMP] [GO:0055015 "ventricular
cardiac muscle cell development" evidence=IMP] [GO:0060041 "retina
development in camera-type eye" evidence=IMP] InterPro:IPR000048
InterPro:IPR001609 InterPro:IPR002928 InterPro:IPR004009
InterPro:IPR008989 Pfam:PF00063 Pfam:PF00612 Pfam:PF01576
Pfam:PF02736 PRINTS:PR00193 PROSITE:PS50096 SMART:SM00015
SMART:SM00242 MGI:MGI:1930780 GO:GO:0005829 GO:GO:0005524
GO:GO:0005938 GO:GO:0007411 GO:GO:0001764 GO:GO:0008360
GO:GO:0008283 GO:GO:0030424 GO:GO:0043025 GO:GO:0001701
GO:GO:0043197 GO:GO:0050885 GO:GO:0043531 GO:GO:0030426
Reactome:REACT_127416 GO:GO:0060041 GO:GO:0000281 GO:GO:0000146
GO:GO:0001725 GO:GO:0055003 GO:GO:0006887 GO:GO:0007512
GO:GO:0030496 GO:GO:0032154 GO:GO:0030048 GO:GO:0021670
EMBL:AL603662 GO:GO:0007097 eggNOG:COG5022 GO:GO:0055015
GO:GO:0021680 GO:GO:0001778 EMBL:AL645644 GO:GO:0006930
GO:GO:0021678 GO:GO:0021592 GO:GO:0016460 GO:GO:0030898 CTD:4628
GeneTree:ENSGT00650000092896 HOGENOM:HOG000173958
HOVERGEN:HBG004704 KO:K10352 OrthoDB:EOG4TXBR1 SUPFAM:SSF50084
EMBL:BC089011 EMBL:AH003264 IPI:IPI00515398 RefSeq:NP_780469.1
UniGene:Mm.218233 ProteinModelPortal:Q61879 SMR:Q61879
DIP:DIP-31956N IntAct:Q61879 STRING:Q61879 PhosphoSite:Q61879
PaxDb:Q61879 PRIDE:Q61879 Ensembl:ENSMUST00000102611 GeneID:77579
KEGG:mmu:77579 InParanoid:Q61879 NextBio:347140 Bgee:Q61879
CleanEx:MM_MYH10 Genevestigator:Q61879
GermOnline:ENSMUSG00000020900 Uniprot:Q61879
Length = 1976
Score = 152 (58.6 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 142/743 (19%), Positives = 279/743 (37%)
Query: 188 EKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYD 247
EK+S+ K K+ D +L+AL E E ++ + EL K E +L
Sbjct: 1130 EKASRNKA----EKQKRDLSEELEALKTELEDTLDTTAAQQELRTKREQEVAEL------ 1179
Query: 248 MKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENSK 307
KKA L E S+ +E K+ KA L+ K L +N +
Sbjct: 1180 -KKALEDETKNHEAQIQDMRQRHATALEELSEQLEQAKRFKANLE---KNKQGLETDNKE 1235
Query: 308 RRMDFLEKVDQGVQVQGKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPAYEPPH 367
+ KV Q V+ + ++K R + +
Sbjct: 1236 LACEV--KVLQQVKAESEHKRKKLDAQVQELHAKVSEGDRLRVELAEKANKLQNELDNVS 1293
Query: 368 DKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALR 427
+E+ + ++ A Q + +++L + S R++ +E++ N L
Sbjct: 1294 TLLEEAEKKGIKFAKDAAGLESQLQDTQELLQEETRQKLNLSSRIRQLEEEKNSLQEQQE 1353
Query: 428 NS--GAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLED--HVGHYIWKSF 483
+N+ + LQ + K+ L + A L+D + + +
Sbjct: 1354 EEEEARKNLEKQVLALQSQLADTKKKVDDD-LGTIESLEEAKKKLLKDVEALSQRLEEKV 1412
Query: 484 ITQDAGDR--DFLAKNLKPFDVPI---LNYVSNESSRKEPF-QISEEMRALGISARLDQV 537
+ D ++ + L + L V + VSN +++ F Q+ E + GISAR +
Sbjct: 1413 LAYDKLEKTKNRLQQELDDLTVDLDHQRQIVSNLEKKQKKFDQLLAEEK--GISARYAEE 1470
Query: 538 FDAPHA-VKEVLISQFGLDSSY---IGSKETDQKADNVAKLGILDFWTPENHYRWSISRY 593
D A +E L + + +KE ++ + + + D + ++ ++
Sbjct: 1471 RDRAEAEAREKETKALSLARALEEALEAKEEFERQNKQLRADMEDLMSSKDDVGKNVHEL 1530
Query: 594 GGHVSASVEPVNQSRLLLCSVDGNXXXXXXXXXXXXXXXXXXXXXXXXXMQTEQRLIEDE 653
A + V + R L ++ +QT E++
Sbjct: 1531 EKSKRALEQQVEEMRTQLEELEDELQATEDAKLRLEVNMQAMKAQFERDLQTRDEQNEEK 1590
Query: 654 AAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKE-DDINTALAKLVDQAADL 712
L K+ E+ ++ E+++R + L+ +E + + N A +++ Q L
Sbjct: 1591 KRLLLKQVRELEAELEDERKQRALAVASKKKMEIDLKDLEAQIEAANKARDEVIKQLRKL 1650
Query: 713 NIQQFKYAIEIKNLLV--EIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASL 770
Q Y E++ + + + +EK + S+E A+I +L+ L E+ A
Sbjct: 1651 QAQMKDYQRELEEARASRDEIFAQSKESEKKLKSLE--AEILQLQEELASSERARRHAEQ 1708
Query: 771 HYEDCKKEVEHC---RKHLSDAKRQAES-IAFITPELEKEFLEMPTTIEELEAAIQDNIS 826
++ E+ + + L D KR+ E+ IA + ELE+E + +E L +
Sbjct: 1709 ERDELADEIANSASGKSALLDEKRRLEARIAQLEEELEEE----QSNMELLNDRFRKTTL 1764
Query: 827 QANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEID-ALKEKWLPTLRNL- 884
Q ++ LN + E Q+ ++ + E KELK L E++ A+K K+ T+ L
Sbjct: 1765 QVDT---LNTELAAERSAAQKS-DNARQQLERQNKELKAKLQELEGAVKSKFKATISALE 1820
Query: 885 --VAQINETFSRNFQEMAVAGEV 905
+ Q+ E + +E A A ++
Sbjct: 1821 AKIGQLEEQLEQEAKERAAANKL 1843
Score = 115 (45.5 bits), Expect = 8.9e-05, Sum P(2) = 8.9e-05
Identities = 52/216 (24%), Positives = 96/216 (44%)
Query: 653 EAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALA--KLVDQAA 710
++A L ++R I Q+E+ E N L R ++ + D +NT LA + Q +
Sbjct: 1724 KSALLDEKRRLEARIAQLEEELEEEQSNMELLNDRFRKTTLQVDTLNTELAAERSAAQKS 1783
Query: 711 DLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIE-FDAKIRELEFNLKQHEKLALQAS 769
D QQ + + K L ++ + + K A+I +AKI +LE L+Q K A+
Sbjct: 1784 DNARQQLER--QNKELKAKLQELEGAVKSKFKATISALEAKIGQLEEQLEQEAKERAAAN 1841
Query: 770 LHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQAN 829
+K+++ + D +R A+ ++EK M +LE A ++ ++AN
Sbjct: 1842 KLVRRTEKKLKEIFMQVEDERRHADQYK---EQMEKANARMKQLKRQLEEA-EEEATRAN 1897
Query: 830 SIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKR 865
+ + + +E + E LS + K L+R
Sbjct: 1898 AS---RRKLQRELDDATEANEGLSREVSTLKNRLRR 1930
Score = 77 (32.2 bits), Expect = 8.9e-05, Sum P(2) = 8.9e-05
Identities = 42/163 (25%), Positives = 66/163 (40%)
Query: 85 KRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVN 144
KR +E +K +L +TK I D R + E LE KRF +
Sbjct: 1171 KREQEVAELKKALEDETKNHEAQIQ---DMRQRHATALE----ELSEQLEQAKRFKANLE 1223
Query: 145 NLTQFLPQDR---VCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVK 201
Q L D CE L VK E ++ D Q+ H A V + +L+ +E K
Sbjct: 1224 KNKQGLETDNKELACEVKVLQQVKAESEHKRKKLDAQVQELH-AKVSEGDRLR-VELAEK 1281
Query: 202 RNG--DTLNQLKALNVEQEKD-VERVRQRAELLEKVESMKKKL 241
N + L+ + L E EK ++ + A L +++ ++ L
Sbjct: 1282 ANKLQNELDNVSTLLEEAEKKGIKFAKDAAGLESQLQDTQELL 1324
Score = 47 (21.6 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 31/150 (20%), Positives = 69/150 (46%)
Query: 102 KEEHLTIMRKIDTR-----NKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQFLPQDRVC 156
K+E I+ +++R +++ N K + + ++ ++ + + Q L ++V
Sbjct: 917 KQELEEILHDLESRVEEEEERNQILQNEKKKMQAHIQDLEEQLD-EEEGARQKLQLEKVT 975
Query: 157 EFAKLSPVK----LLEE-TEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLK 211
AK+ ++ LLE+ K + + +L A E SS+L E K N+ +
Sbjct: 976 AEAKIKKMEEEVLLLEDQNSKFIKEKKLMEDRIA--ECSSQLAEEEEKAKNLAKIRNKQE 1033
Query: 212 ALNVEQEKDVERVRQRAELLEKVESMKKKL 241
+ + E ER+++ + +++E K+KL
Sbjct: 1034 VMISDLE---ERLKKEEKTRQELEKAKRKL 1060
>UNIPROTKB|F1SU27 [details] [associations]
symbol:GCC2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090161 "Golgi ribbon formation" evidence=IEA]
[GO:0071955 "recycling endosome to Golgi transport" evidence=IEA]
[GO:0070861 "regulation of protein exit from endoplasmic reticulum"
evidence=IEA] [GO:0042802 "identical protein binding" evidence=IEA]
[GO:0034499 "late endosome to Golgi transport" evidence=IEA]
[GO:0034453 "microtubule anchoring" evidence=IEA] [GO:0031023
"microtubule organizing center organization" evidence=IEA]
[GO:0006622 "protein targeting to lysosome" evidence=IEA]
[GO:0005802 "trans-Golgi network" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000042 "protein targeting to Golgi" evidence=IEA]
InterPro:IPR000237 Pfam:PF01465 PROSITE:PS50913 SMART:SM00755
GO:GO:0005634 GO:GO:0005794 GO:GO:0005802 GO:GO:0006622
GO:GO:0070861 GO:GO:0031023 GO:GO:0034453
GeneTree:ENSGT00700000104373 GO:GO:0000042 Gene3D:1.10.220.60
OMA:CQIEASA GO:GO:0090161 GO:GO:0034499 GO:GO:0071955 EMBL:CU467581
EMBL:FP102256 Ensembl:ENSSSCT00000008915 Uniprot:F1SU27
Length = 1646
Score = 106 (42.4 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 51/252 (20%), Positives = 112/252 (44%)
Query: 649 LIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQ 708
L+ E A ++ +E+ + + K ++E I ++K+K E++++E T+L V Q
Sbjct: 1119 LMNMEIADYERLMKELNQKLANKNSKIEDLEQEIKIQKQKQETLQEE---MTSLQASVQQ 1175
Query: 709 AADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASI--EFDAKIRELE-FNLKQHEKLA 765
+ N + + ++ K L + + + AS+ E +A +++E F ++ E A
Sbjct: 1176 YEEKNTKIKQLLVKTKKELADSKQAENDHLLLQ-ASLKGELEASQQQIEGFKIQLAEVTA 1234
Query: 766 LQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNI 825
+ H E K E ++ L +++ ++ + E + + E + + + +
Sbjct: 1235 EKHKAH-EHLKASAEQQQRTLGTYQQRVAALQEECRAAKAEQAAVTSEFESYKVRVHNVL 1293
Query: 826 SQAN--SIFFL-NQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLR 882
Q S+ N+ QE EH + I+ L K + + L+ ++E+ AL+ + L
Sbjct: 1294 KQQKNKSVSQTENEGAKQEREHLEMLIDQLKIKLQDTQNNLQVHVSELQALQSEHDALLE 1353
Query: 883 NLVAQINETFSR 894
+ ET S+
Sbjct: 1354 RNSRLLQETVSK 1365
Score = 92 (37.4 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 70/331 (21%), Positives = 138/331 (41%)
Query: 134 EITKRFNIQVNNLTQFLPQDRVCEFAKLSP--VKLLEETEKAVGDPQLPVQHCALVEKSS 191
E K F ++ +L L +++ E L V L + EK+ P + ++ E
Sbjct: 858 EKEKSFIKELEHLKPLL-EEKESELQDLRAELVSLKDSLEKS---PSVESDQPSVKEFEE 913
Query: 192 KLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELL-EKVESMKKKLPWLKYDMKK 250
K+ +E K + +N+LK + V+ +K+++ R+ ++L E++ES++ + L M+
Sbjct: 914 KIGYLEKESKEKEEKINKLKLVAVKAKKELDSSRKETQILREELESVRSEKDQLSTSMRD 973
Query: 251 ----AE-YIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINEN 305
AE Y + F +E ++ C+KL+S NE+
Sbjct: 974 LIQGAESYKNLLLEYDKQSEQLDKEKERANNFEHHVEDLTRQLKNTTFQCEKLNS-DNED 1032
Query: 306 SKRRMDFLEKVDQGVQVQGKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPAYEP 365
R++ L+ + ++VQ + R Q + +
Sbjct: 1033 LLARIETLQSNTRLLEVQ-----------ILEAHKAKAVADRELEAEKLQKEQKIKEHAS 1081
Query: 366 PHDKIEKLGSQILELGVQANQKRLQKSEKE-----KILNQNKLTLRQCSDRLKDMEDKNN 420
++E+L +L +Q +K+LQK+ +E K Q L + +D + M++ N
Sbjct: 1082 SICELEEL-----QLQLQKEKKQLQKTMQELELVRKDAQQTTLMNMEIADYERLMKELNQ 1136
Query: 421 KLLHALRNSGAENIFEAYCWLQQHRHELNKE 451
KL A +NS E++ E +Q+ + E +E
Sbjct: 1137 KL--ANKNSKIEDL-EQEIKIQKQKQETLQE 1164
>DICTYBASE|DDB_G0287291 [details] [associations]
symbol:abpD "interaptin" species:44689 "Dictyostelium
discoideum" [GO:0005635 "nuclear envelope" evidence=IDA]
[GO:0009847 "spore germination" evidence=IMP] [GO:0007275
"multicellular organismal development" evidence=IEA;IMP]
[GO:0042175 "nuclear outer membrane-endoplasmic reticulum membrane
network" evidence=IDA] [GO:0016337 "cell-cell adhesion"
evidence=IMP] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA;IDA] [GO:0003779 "actin binding" evidence=IEA;ISS]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0032580
"Golgi cisterna membrane" evidence=IEA] [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR001589 InterPro:IPR001715 Pfam:PF00307 PROSITE:PS00019
PROSITE:PS00020 PROSITE:PS50021 SMART:SM00033
dictyBase:DDB_G0287291 GO:GO:0016021 GO:GO:0007275 GO:GO:0005635
GO:GO:0003779 GO:GO:0005789 GO:GO:0031965 GenomeReviews:CM000154_GR
GO:GO:0005815 eggNOG:COG5069 Gene3D:1.10.418.10 SUPFAM:SSF47576
EMBL:AF057019 EMBL:AAFI02000100 PIR:T14867 RefSeq:XP_637275.1
HSSP:P01096 ProteinModelPortal:O76329 IntAct:O76329
EnsemblProtists:DDB0191136 GeneID:8626106 KEGG:ddi:DDB_G0287291
OMA:IEKNESD GO:GO:0032580 GO:GO:0016337 GO:GO:0009847
Uniprot:O76329
Length = 1738
Score = 123 (48.4 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 57/231 (24%), Positives = 115/231 (49%)
Query: 644 QTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKE-DDINTAL 702
Q EQ+L + E+E I +Q++ ++R++++ +++ K+ +EK+ + L
Sbjct: 1104 QKEQQLKQQSIENDLIEKENQIQQLQLQLNEQRQLQSEVSIDNDKILELEKQLKQCQSDL 1163
Query: 703 AKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHE 762
KL D+ QQ K ++++ +E + ++ + + D++ +L+ + KQ
Sbjct: 1164 LKLNDEKQ----QQDK---QLQDKQIEFDQLQLTF---NQFKNDKDSQFIQLQDDQKQQL 1213
Query: 763 KLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQ 822
+ ++Q L+ K+E + K LS+ + +SI F E EK+ E E+L++ IQ
Sbjct: 1214 Q-SIQQDLN--QLKQENQEKEKQLSEKDEKLQSIQFENQEKEKQLSEKD---EKLQS-IQ 1266
Query: 823 DNISQANSIFFLNQNILQEYEHRQRQIE-DLST-KQEADKKELKRFLAEID 871
N++Q N E + + + I+ DL+ KQE +KE + L+E D
Sbjct: 1267 QNLNQLNDENQEKVKQFSEKDEKLQSIQQDLNQLKQENQEKEKQ--LSEKD 1315
Score = 119 (46.9 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 47/240 (19%), Positives = 123/240 (51%)
Query: 648 RLIEDEAAKLQKEREEIINIVQIEKRKRREM-ENHINLRKRKLESIEKEDDINTALAKL- 705
+L +D+ +LQ ++++ + Q + K +++ E L+ + E+ EKE ++ KL
Sbjct: 1204 QLQDDQKQQLQSIQQDLNQLKQENQEKEKQLSEKDEKLQSIQFENQEKEKQLSEKDEKLQ 1263
Query: 706 -----VDQAADLN---IQQFKYAIE-IKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEF 756
++Q D N ++QF E ++++ ++ K EK E D K++ ++
Sbjct: 1264 SIQQNLNQLNDENQEKVKQFSEKDEKLQSIQQDLNQLKQENQEKEKQLSEKDEKLQSIQQ 1323
Query: 757 NLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEE 816
+L Q ++ + ++ ++++ ++ +D +Q++ + +LE++ E +++
Sbjct: 1324 DLNQLNDDQIKKNEKLKEKEEQLLKLQQDFND--QQSQQLK----QLEEKLSEKENQLQQ 1377
Query: 817 LEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEK 876
L+ ++ I+Q N N+ I+Q+ + + + + ++ ++KE++R + EI+ LK++
Sbjct: 1378 LKQ--ENEINQLNQQQQSNE-IIQQLKDQLLKQQQQEQQENNNEKEIERLIQEIEQLKQQ 1434
Score = 106 (42.4 bits), Expect = 0.00093, Sum P(2) = 0.00093
Identities = 75/372 (20%), Positives = 154/372 (41%)
Query: 650 IEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKE-DDINTALAKLVDQ 708
I+ +L E +E + + K + ++ +N K++ + EK+ + + L +
Sbjct: 1265 IQQNLNQLNDENQEKVKQFSEKDEKLQSIQQDLNQLKQENQEKEKQLSEKDEKLQSIQQD 1324
Query: 709 AADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASI-EFDAKIRELEFNLKQHEKLALQ 767
LN Q K ++K +++ + + ++ + + + K+ E E L+Q ++
Sbjct: 1325 LNQLNDDQIKKNEKLKEKEEQLLKLQQDFNDQQSQQLKQLEEKLSEKENQLQQLKQENEI 1384
Query: 768 ASLHYEDCKKEV-EHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNIS 826
L+ + E+ + + L ++Q + EKE + IE+L+ Q I
Sbjct: 1385 NQLNQQQQSNEIIQQLKDQLLKQQQQEQQ----ENNNEKEIERLIQEIEQLKQ--QQEID 1438
Query: 827 QANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLVA 886
Q+ N+ I + + Q++ + LS + D+ L++ E+D LK+ +
Sbjct: 1439 QSE---LSNKEI--KIQTTQQEFDQLSHNRSKDQLHLQQLQQELDQLKQSFDDQDHQFKK 1493
Query: 887 QINETFSRNFQ-EMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVLSAHHQSGGERS 945
I+E ++ Q E + LD+ L+K K + LE+ S Q +
Sbjct: 1494 VIDERYNLQLQLEQSTLSNNQLDQ----------LLKEKLKP---LELDSNEKQKTIDDL 1540
Query: 946 VSTILYL-VSLQ---DLT---NCPFRVVDE-INQGMDPINER-KMFQQLVRAASQPNTPQ 996
+S I L +SLQ DL N + ++ I Q + ++E+ + + L + Q P
Sbjct: 1541 LSNISNLQISLQNDKDLISERNNSIKTLESRITQQLSLLDEKDNLIKDLQQQKQQQQQPP 1600
Query: 997 CFLLTPKLLPDL 1008
+P P L
Sbjct: 1601 TASSSPSSSPSL 1612
Score = 75 (31.5 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 60/307 (19%), Positives = 125/307 (40%)
Query: 125 KVVPKGEVLEITKRFNIQ-VNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVG-DPQLPVQ 182
K+V +++E+ K + + LT QD++ E + + E++ K V + +L +
Sbjct: 402 KIVEVEKIVEVEKIVKVDDIEKLTNL--QDQLTEQQQ----QYQEKSLKLVNLELELQEK 455
Query: 183 HCALVEKSSKLKTIECTVKRNGDTLNQLKAL-NVEQEKDVERVRQRAELLE--KVESMKK 239
LV+KS++L T++ T N + + ++ L N + + ++++ E++ K+ES +K
Sbjct: 456 SNQLVDKSNQLSTMQAT---NSELMEKIGGLMNDLTDIPTQDIKEKDEIIANLKIES-EK 511
Query: 240 KLPWLKYDMK--KAEYIXXXXXXXXXXXXXXXXXNTLHEFS-KPIEGKKQEKAILDGDCK 296
L + D ++ Y N L E K IE L + +
Sbjct: 512 NLKCFQDDFNALQSRYSLTIEQTSQLQDRIKQLINELQERDDKFIEFTNSSNQSLADNQR 571
Query: 297 KLSSLINENSKRRMDFLEKVD-QGVQVQGKYKXXXXXXXXXXXXXXXILKARXXXXXXXX 355
+ L NE + ++ D + + Q + +
Sbjct: 572 VIDQLTNEKQSITLQLQDQQDIKEKEFQFEKQQLLSQIDSITTNIQEYQDKFNNLQQEFN 631
Query: 356 XXQTVPAYEPPHDKIEKLGSQILELGVQANQKRLQ-KSEKEKILNQNKLTLRQCSDRLKD 414
QT+ E H +L Q+ ++ N+K+ Q +SE + N+ +Q S++ K+
Sbjct: 632 TQQTLNQQET-H----RLTQQLYQINTDYNEKQTQLQSEIKDNQTINEQLNKQLSEKDKE 686
Query: 415 MEDKNNK 421
+E +N+
Sbjct: 687 IEKLSNQ 693
Score = 70 (29.7 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 78/368 (21%), Positives = 152/368 (41%)
Query: 107 TIMRKIDTRNKSEWFFNGKVVPKGEVLE-ITKRFNIQVNNLTQFLPQDRVCEFAK-LSPV 164
TI+ + + + E + K++ K + L+ + + F+ Q+N Q QD++ K L +
Sbjct: 808 TIIELSELKEQKE-LNDSKLIEKEKQLQQLQQEFD-QLNEKNQKDHQDQLELLEKQLKQL 865
Query: 165 KL----LEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKD 220
+ L ET +++ + QL Q+ L+ K + + + +K Q++ + +Q+
Sbjct: 866 QQEYDQLNETNQSI-ENQLNQQN--LINKENLNEKEQELLKLQNQLNQQIEKIQFDQQ-- 920
Query: 221 VERVRQRAELLEKVESMKKKLPWLK--YDMKKAEYIXXXXXXXXXXXXXXXXXNTL-HEF 277
E +Q + +E V +KL L+ YD K + ++ +E
Sbjct: 921 -EFSKQNSINIELVNEKNEKLIQLQQDYDQLKQQNRSNDEKDENDLIEKENQLKSIQNEL 979
Query: 278 SKPIEGKKQEKAILDGDCKKLSSLINENSKRRMDFLEKVDQGVQVQGKYKXXXXXXXXXX 337
++ IE K E + K+ S EN D +EK +Q Q+Q +
Sbjct: 980 NQLIE--KNESDHKEQQLKQQSI---EN-----DLIEKENQIQQLQSQLNEQRQQQSNQL 1029
Query: 338 XXXXXILKARXXXXXXXXXXQTVPAYEPPHDKIEKLGSQILELGVQANQKRLQKSEKEKI 397
L Q + +D EK +QI +L Q N++R Q+S +
Sbjct: 1030 SEKDQQLNQLIEKNQFDQKEQQLKQQSIENDLFEK-ENQIQQLQSQLNEQRQQQSNQ--- 1085
Query: 398 LNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAEN-IFEAYCWLQQHRHELNKEAYGPV 456
L++ L Q ++ + + K +L + EN + E +QQ + +LN++ +
Sbjct: 1086 LSEKDQQLNQLIEK-NESDQKEQQL----KQQSIENDLIEKENQIQQLQLQLNEQRQ--L 1138
Query: 457 LLEVNVSN 464
EV++ N
Sbjct: 1139 QSEVSIDN 1146
>UNIPROTKB|F1N6C8 [details] [associations]
symbol:SMC1B "Structural maintenance of chromosomes
protein" species:9913 "Bos taurus" [GO:0034991 "nuclear meiotic
cohesin complex" evidence=IEA] [GO:0007126 "meiosis" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0000800 "lateral element"
evidence=IEA] [GO:0000775 "chromosome, centromeric region"
evidence=IEA] [GO:0030261 "chromosome condensation" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0007126 GO:GO:0000775 GO:GO:0003677
GO:GO:0006281 GO:GO:0006310 GO:GO:0030261 GO:GO:0000800
GO:GO:0007062 SUPFAM:SSF75553 GO:GO:0030893
GeneTree:ENSGT00580000081569 OMA:QLYHNEK EMBL:DAAA02014929
EMBL:DAAA02014930 IPI:IPI00697785 ProteinModelPortal:F1N6C8
PRIDE:F1N6C8 Ensembl:ENSBTAT00000014005 Uniprot:F1N6C8
Length = 1235
Score = 114 (45.2 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 95/448 (21%), Positives = 169/448 (37%)
Query: 28 LHNFMTF-DHLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI-----G 81
+ NF ++ + P R +IGPNGSGKS+++ A++ +G L R +I G
Sbjct: 9 VENFKSWRGRQVIGPFKRFTCIIGPNGSGKSNVMDALSFVMGEKIANL-RVKNIQELIHG 67
Query: 82 AYV-KRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFN 140
A++ K S +KI ++ EE T R I SE+ FN + + + ++
Sbjct: 68 AHIGKPVSSSASVKIVYLEESGEEK-TFARTI-RGGCSEYSFNDNPMSRSAYITELEKIG 125
Query: 141 IQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTV 200
I V + Q V + P + + E+ +L ++ EK KL E
Sbjct: 126 IIVKARNCLVFQGTVESISMKKPKERTQFFEEISTSGELIGEY---EEKKRKLHKAEEDA 182
Query: 201 KRNGDTLNQLKALNVEQEKDVERVRQRAELLE--KVESMKKKLPWLKYDMKKAEYIXXXX 258
+ N + + A + + E + LLE K+ ++ +L L ++ KK ++
Sbjct: 183 QFNFNKKKNVAAERKHAKLEKEEADRYQNLLEELKINKIQLQLFRLYHNEKKINFLYTEL 242
Query: 259 XXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDG-------DCKKLSSLINENSKRRMD 311
+ HE ++ KK+E +L + K L +L+N+ + +
Sbjct: 243 ERVNKNLSVTRESLSHHE--NIVKAKKKEHGMLSRQLQQTQKELKSLEALLNQKRPQYIK 300
Query: 312 FLEKVDQGVQVQGKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPAYEPPHDKIE 371
E ++ K +KA + + +
Sbjct: 301 AKENTSHHLKKLDMAKKSIKDSEKQCSKQEDDIKALETELADLDGAWRSFEKQIEEEMLH 360
Query: 372 KLGSQI-LELGVQANQKRLQKSEKEK--ILNQN--KLTLRQCSDRLKDMEDKNNKLLHAL 426
K G I LE G K L++ ++K I+ Q KL Q SD + +K H
Sbjct: 361 K-GRDIELEAGQLVQYKELKEQVRKKVAIMTQQLEKLQWEQRSDEERWAFEKRR---HG- 415
Query: 427 RNSGAENIFEAYCWLQQHRHELNK-EAY 453
ENI + ++ H+ + K E Y
Sbjct: 416 --EVQENIKQIKEQIEDHKKRIEKLEEY 441
Score = 81 (33.6 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 70/382 (18%), Positives = 160/382 (41%)
Query: 652 DEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAAD 711
++ L+K E + IV K++++++ + +E ++ + I K + A D
Sbjct: 847 EDTDHLKKVEENCLKIVDELMEKQQQLKDEFVTQNTNVEKVQAQ--IEEERKKFL--AID 902
Query: 712 LNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLH 771
+ +++ K +++ S + + EKH ++ D K++++E L +L +
Sbjct: 903 REVGKWQ-----KEVVILQSSLEQNRLEKH--NMLLDCKVQDIEIVLLLG---SLDDIIE 952
Query: 772 YEDCKKEVEHCRKHLSDAKRQA-ESIAFITPELE--KEFLEMPTTIEELEAAIQDNISQA 828
E+ K + A E A I + +E L+ + +E+EA ++ + Q
Sbjct: 953 VEEGGKASSGTEAEGTQATTDIYEKEAAIEVDYSSLREDLKALQSDKEIEAQLRLLLQQV 1012
Query: 829 NSIFFLNQNILQEYEHRQRQIEDLSTKQ----------EADKKELKRFLAEIDALKEKWL 878
S +L+ R +E+L T + EA +KE + E + +K++
Sbjct: 1013 AS---QEDILLKTAAPNLRAVENLKTVRDKFQESIDAFEASRKEARICRQEFEQVKKRRY 1069
Query: 879 PTLRNLVAQINETFSRNFQEMAVAGEV-SLDEHESDFDKFGILIKVKFRQSGQLEVLSAH 937
I+ + + ++++ + E+ + + I G+ +
Sbjct: 1070 DLFNQCFEHISISIDQIYKKLCRNNSAQAFLSPENPEEPYLEGISYNCVAPGK-RFMPMD 1128
Query: 938 HQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTPQC 997
+ SGGE+ V+ + L ++ PF V+DE++ +D N K+ ++ +Q Q
Sbjct: 1129 NLSGGEKCVAALALLFAVHSFRPAPFFVLDEVDAALDNTNIGKV-SSYIKEQTQEQF-QM 1186
Query: 998 FLLTPKLLPDLEYSEACSILNI 1019
+++ L + YS+A +++ I
Sbjct: 1187 IIIS---LKEEFYSKADALIGI 1205
Score = 67 (28.6 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 42/195 (21%), Positives = 87/195 (44%)
Query: 647 QRLIEDEAAKLQKEREEIINIVQIEK-----RKRREMENHI-NLRKRKL---ESIEKEDD 697
Q LI+ +L+ + E+ I++ + R++ ++++ + N+ + E I++
Sbjct: 702 QALIQGTTTRLKYAQSEL-EIIKKKHLAAFYREQSQLQSELLNIESQCAMLSEGIKERQQ 760
Query: 698 INTALAKLVDQAADLNIQQFKYAIEIKNLL-VEIVSCKWSYAEKHMASIEFDAKIRELEF 756
+ +D+ D Q F I ++N+ E K E +EF+ + L
Sbjct: 761 RIKEFQRKIDKVEDDIFQHFCEEIGVENIREFENKHIK-QQQEADQKRLEFEKQKTRLNI 819
Query: 757 NLKQHEKLALQASLHYEDCKKE-VEHCRKHLSDAKRQAESIAFITPEL-EK------EFL 808
L ++ + L+ L+ + KE +E R+ K+ E+ I EL EK EF+
Sbjct: 820 QL-EYSRNHLKKKLNKINTLKEAIEKGREDTDHLKKVEENCLKIVDELMEKQQQLKDEFV 878
Query: 809 EMPTTIEELEAAIQD 823
T +E+++A I++
Sbjct: 879 TQNTNVEKVQAQIEE 893
Score = 61 (26.5 bits), Expect = 6.4e-05, Sum P(3) = 6.4e-05
Identities = 16/63 (25%), Positives = 29/63 (46%)
Query: 650 IEDEAAKLQKEREEIINIVQIEKRKRREMENHIN-LRKRKLESIEKEDDINTALAKLVDQ 708
IED +++K E K K+ + EN +N + K K E +++N ++L +
Sbjct: 428 IEDHKKRIEKLEEYTKTCTNCLKEKKEQEENLVNEIEKTKSRMSEVNEELNLIRSELQNA 487
Query: 709 AAD 711
D
Sbjct: 488 GID 490
Score = 61 (26.5 bits), Expect = 6.4e-05, Sum P(3) = 6.4e-05
Identities = 33/141 (23%), Positives = 62/141 (43%)
Query: 746 EFDAKIRELEFNLKQHE-KLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELE 804
+ A I+ LK + +L + H +E + L + + Q ++ E +
Sbjct: 700 QIQALIQGTTTRLKYAQSELEIIKKKHLAAFYREQSQLQSELLNIESQCAMLSEGIKERQ 759
Query: 805 KEFLEMPTTIEELEAAI-Q---DNISQANSIFFLNQNILQEYEHRQRQIE------DLST 854
+ E I+++E I Q + I N F N++I Q+ E Q+++E L+
Sbjct: 760 QRIKEFQRKIDKVEDDIFQHFCEEIGVENIREFENKHIKQQQEADQKRLEFEKQKTRLNI 819
Query: 855 KQEADKKELKRFLAEIDALKE 875
+ E + LK+ L +I+ LKE
Sbjct: 820 QLEYSRNHLKKKLNKINTLKE 840
>RGD|71000 [details] [associations]
symbol:Myh10 "myosin, heavy chain 10, non-muscle" species:10116
"Rattus norvegicus" [GO:0000146 "microfilament motor activity"
evidence=ISO] [GO:0000281 "cytokinesis after mitosis" evidence=ISO]
[GO:0001701 "in utero embryonic development" evidence=ISO]
[GO:0001725 "stress fiber" evidence=ISO] [GO:0001764 "neuron
migration" evidence=ISO] [GO:0001778 "plasma membrane repair"
evidence=ISO] [GO:0003774 "motor activity" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005516 "calmodulin binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005938 "cell cortex"
evidence=ISO] [GO:0006887 "exocytosis" evidence=ISO] [GO:0006928
"cellular component movement" evidence=NAS] [GO:0006930
"substrate-dependent cell migration, cell extension" evidence=ISO]
[GO:0007097 "nuclear migration" evidence=ISO] [GO:0007409
"axonogenesis" evidence=ISO] [GO:0007411 "axon guidance"
evidence=ISO] [GO:0007420 "brain development" evidence=ISO]
[GO:0007512 "adult heart development" evidence=ISO] [GO:0008283
"cell proliferation" evidence=ISO] [GO:0008360 "regulation of cell
shape" evidence=IEA;ISO] [GO:0016459 "myosin complex"
evidence=IEA;ISO] [GO:0016460 "myosin II complex" evidence=ISO]
[GO:0021592 "fourth ventricle development" evidence=ISO] [GO:0021670
"lateral ventricle development" evidence=ISO] [GO:0021678 "third
ventricle development" evidence=ISO] [GO:0021680 "cerebellar
Purkinje cell layer development" evidence=ISO] [GO:0030036 "actin
cytoskeleton organization" evidence=ISO] [GO:0030048 "actin
filament-based movement" evidence=ISO] [GO:0030239 "myofibril
assembly" evidence=ISO] [GO:0030424 "axon" evidence=ISO] [GO:0030426
"growth cone" evidence=ISO] [GO:0030496 "midbody" evidence=ISO]
[GO:0030898 "actin-dependent ATPase activity" evidence=ISO]
[GO:0031175 "neuron projection development" evidence=ISO]
[GO:0032154 "cleavage furrow" evidence=ISO] [GO:0043005 "neuron
projection" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0043197 "dendritic spine" evidence=ISO]
[GO:0043531 "ADP binding" evidence=ISO] [GO:0050885 "neuromuscular
process controlling balance" evidence=ISO] [GO:0051015 "actin
filament binding" evidence=IEA;ISO] [GO:0055003 "cardiac myofibril
assembly" evidence=ISO] [GO:0055015 "ventricular cardiac muscle cell
development" evidence=ISO] [GO:0060041 "retina development in
camera-type eye" evidence=ISO] [GO:0005819 "spindle" evidence=ISO]
[GO:0005886 "plasma membrane" evidence=ISO] [GO:0031594
"neuromuscular junction" evidence=ISO] InterPro:IPR000048
InterPro:IPR001609 InterPro:IPR002928 InterPro:IPR004009
InterPro:IPR008989 Pfam:PF00063 Pfam:PF00612 Pfam:PF01576
Pfam:PF02736 PRINTS:PR00193 PROSITE:PS50096 SMART:SM00015
SMART:SM00242 RGD:71000 GO:GO:0005886 GO:GO:0005524 GO:GO:0005938
GO:GO:0007411 GO:GO:0001764 GO:GO:0005819 GO:GO:0008360
GO:GO:0008283 GO:GO:0030424 GO:GO:0043025 GO:GO:0001701
GO:GO:0043197 GO:GO:0031594 GO:GO:0050885 GO:GO:0043531
GO:GO:0006928 GO:GO:0030426 GO:GO:0060041 GO:GO:0000281
GO:GO:0000146 GO:GO:0001725 GO:GO:0055003 GO:GO:0006887
GO:GO:0007512 GO:GO:0030496 GO:GO:0032154 GO:GO:0030048
GO:GO:0021670 GO:GO:0007097 eggNOG:COG5022 GO:GO:0055015
GO:GO:0021680 GO:GO:0001778 GO:GO:0006930 GO:GO:0021678
GO:GO:0021592 GO:GO:0016460 GO:GO:0030898 CTD:4628
HOGENOM:HOG000173958 HOVERGEN:HBG004704 KO:K10352 SUPFAM:SSF50084
EMBL:AF139055 IPI:IPI00949586 RefSeq:NP_113708.1 UniGene:Rn.98166
ProteinModelPortal:Q9JLT0 SMR:Q9JLT0 STRING:Q9JLT0
PhosphoSite:Q9JLT0 PRIDE:Q9JLT0 GeneID:79433 KEGG:rno:79433
UCSC:RGD:71000 InParanoid:Q9JLT0 NextBio:614799 ArrayExpress:Q9JLT0
Genevestigator:Q9JLT0 GermOnline:ENSRNOG00000002886 Uniprot:Q9JLT0
Length = 1976
Score = 151 (58.2 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 142/743 (19%), Positives = 279/743 (37%)
Query: 188 EKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYD 247
EK+S+ K K+ D +L+AL E E ++ + EL K E +L
Sbjct: 1130 EKASRNKA----EKQKRDLSEELEALKTELEDTLDTTAAQQELRTKREQEVAEL------ 1179
Query: 248 MKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENSK 307
KKA L E S+ +E K+ KA L+ K L +N +
Sbjct: 1180 -KKALEDETKNHEAQIQDMRQRHATALEELSEQLEQAKRFKANLE---KNKQGLETDNKE 1235
Query: 308 RRMDFLEKVDQGVQVQGKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPAYEPPH 367
+ KV Q V+ + ++K R + +
Sbjct: 1236 LACEV--KVLQQVKAESEHKRKKLDAQVQELHAKVSEGDRLRVELAEKANKLQNELDNVS 1293
Query: 368 DKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALR 427
+E+ + ++ A Q + +++L + S R++ +E++ N L
Sbjct: 1294 TLLEEAEKKGMKFAKDAAGLESQLQDTQELLQEETRQKLNLSSRIRQLEEEKNSLQEQQE 1353
Query: 428 NS--GAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLED--HVGHYIWKSF 483
+N+ + LQ + K+ L + A L+D + + +
Sbjct: 1354 EEEEARKNLEKQVLALQSQLADTKKKVDDD-LGTIEGLEEAKKKLLKDVEALSQRLEEKV 1412
Query: 484 ITQDAGDR--DFLAKNLKPFDVPI---LNYVSNESSRKEPF-QISEEMRALGISARLDQV 537
+ D ++ + L + L V + VSN +++ F Q+ E + GISAR +
Sbjct: 1413 LAYDKLEKTKNRLQQELDDLTVDLDHQRQIVSNLEKKQKKFDQLLAEEK--GISARYAEE 1470
Query: 538 FDAPHA-VKEVLISQFGLDSSY---IGSKETDQKADNVAKLGILDFWTPENHYRWSISRY 593
D A +E L + + +KE ++ + + + D + ++ ++
Sbjct: 1471 RDRAEAEAREKETKALSLARALEEALEAKEEFERQNKQLRADMEDLMSSKDDVGKNVHEL 1530
Query: 594 GGHVSASVEPVNQSRLLLCSVDGNXXXXXXXXXXXXXXXXXXXXXXXXXMQTEQRLIEDE 653
A + V + R L ++ +QT E++
Sbjct: 1531 EKSKRALEQQVEEMRTQLEELEDELQATEDAKLRLEVNMQAMKAQFERDLQTRDEQNEEK 1590
Query: 654 AAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKE-DDINTALAKLVDQAADL 712
L K+ E+ ++ E+++R + L+ +E + + N A +++ Q L
Sbjct: 1591 KRLLLKQVRELEAELEDERKQRALAVASKKKMEIDLKDLEAQIEAANKARDEVIKQLRKL 1650
Query: 713 NIQQFKYAIEIKNLLV--EIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASL 770
Q Y E++ + + + +EK + S+E A+I +L+ L E+ A
Sbjct: 1651 QAQMKDYQRELEEARASRDEIFAQSKESEKKLKSLE--AEILQLQEELASSERARRHAEQ 1708
Query: 771 HYEDCKKEVEHC---RKHLSDAKRQAES-IAFITPELEKEFLEMPTTIEELEAAIQDNIS 826
++ E+ + + L D KR+ E+ IA + ELE+E + +E L +
Sbjct: 1709 ERDELADEIANSASGKSALLDEKRRLEARIAQLEEELEEE----QSNMELLNDRFRKTTL 1764
Query: 827 QANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEID-ALKEKWLPTLRNL- 884
Q ++ LN + E Q+ ++ + E KELK L E++ A+K K+ T+ L
Sbjct: 1765 QVDT---LNTELAAERSAAQKS-DNARQQLERQNKELKAKLQELEGAVKSKFKATISALE 1820
Query: 885 --VAQINETFSRNFQEMAVAGEV 905
+ Q+ E + +E A A ++
Sbjct: 1821 AKIGQLEEQLEQEAKERAAANKL 1843
Score = 115 (45.5 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 52/216 (24%), Positives = 96/216 (44%)
Query: 653 EAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALA--KLVDQAA 710
++A L ++R I Q+E+ E N L R ++ + D +NT LA + Q +
Sbjct: 1724 KSALLDEKRRLEARIAQLEEELEEEQSNMELLNDRFRKTTLQVDTLNTELAAERSAAQKS 1783
Query: 711 DLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIE-FDAKIRELEFNLKQHEKLALQAS 769
D QQ + + K L ++ + + K A+I +AKI +LE L+Q K A+
Sbjct: 1784 DNARQQLER--QNKELKAKLQELEGAVKSKFKATISALEAKIGQLEEQLEQEAKERAAAN 1841
Query: 770 LHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQAN 829
+K+++ + D +R A+ ++EK M +LE A ++ ++AN
Sbjct: 1842 KLVRRTEKKLKEIFMQVEDERRHADQYK---EQMEKANARMKQLKRQLEEA-EEEATRAN 1897
Query: 830 SIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKR 865
+ + + +E + E LS + K L+R
Sbjct: 1898 AS---RRKLQRELDDATEANEGLSREVSTLKNRLRR 1930
Score = 76 (31.8 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 42/153 (27%), Positives = 60/153 (39%)
Query: 85 KRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVN 144
KR +E +K +L +TK I D R + E LE KRF +
Sbjct: 1171 KREQEVAELKKALEDETKNHEAQIQ---DMRQRHATALE----ELSEQLEQAKRFKANLE 1223
Query: 145 NLTQFLPQDR---VCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVK 201
Q L D CE L VK E ++ D Q+ H A V + +L+ +E K
Sbjct: 1224 KNKQGLETDNKELACEVKVLQQVKAESEHKRKKLDAQVQELH-AKVSEGDRLR-VELAEK 1281
Query: 202 RNG--DTLNQLKALNVEQEKDVERVRQRAELLE 232
N + L+ + L E EK + + A LE
Sbjct: 1282 ANKLQNELDNVSTLLEEAEKKGMKFAKDAAGLE 1314
Score = 47 (21.6 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 31/150 (20%), Positives = 69/150 (46%)
Query: 102 KEEHLTIMRKIDTR-----NKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQFLPQDRVC 156
K+E I+ +++R +++ N K + + ++ ++ + + Q L ++V
Sbjct: 917 KQELEEILHDLESRVEGEEERNQILQNEKKKMQAHIQDLEEQLD-EEEGARQKLQLEKVT 975
Query: 157 EFAKLSPVK----LLEE-TEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLK 211
AK+ ++ LLE+ K + + +L A E SS+L E K N+ +
Sbjct: 976 AEAKIKKMEEEVLLLEDQNSKFIKEKKLMEDRIA--ECSSQLAEEEEKAKNLAKIRNKQE 1033
Query: 212 ALNVEQEKDVERVRQRAELLEKVESMKKKL 241
+ + E ER+++ + +++E K+KL
Sbjct: 1034 VMISDLE---ERLKKEEKTRQELEKAKRKL 1060
>UNIPROTKB|G3V9Y1 [details] [associations]
symbol:Myh10 "Myosin-10" species:10116 "Rattus norvegicus"
[GO:0000146 "microfilament motor activity" evidence=IEA]
[GO:0000281 "cytokinesis after mitosis" evidence=IEA] [GO:0001701
"in utero embryonic development" evidence=IEA] [GO:0001725 "stress
fiber" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001778 "plasma membrane repair" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005938 "cell
cortex" evidence=IEA] [GO:0006887 "exocytosis" evidence=IEA]
[GO:0006930 "substrate-dependent cell migration, cell extension"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=IEA]
[GO:0007411 "axon guidance" evidence=IEA] [GO:0007512 "adult heart
development" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0008360 "regulation of cell shape" evidence=IEA]
[GO:0016460 "myosin II complex" evidence=IEA] [GO:0021592 "fourth
ventricle development" evidence=IEA] [GO:0021670 "lateral ventricle
development" evidence=IEA] [GO:0021678 "third ventricle
development" evidence=IEA] [GO:0021680 "cerebellar Purkinje cell
layer development" evidence=IEA] [GO:0030048 "actin filament-based
movement" evidence=IEA] [GO:0030424 "axon" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0030496 "midbody"
evidence=IEA] [GO:0030898 "actin-dependent ATPase activity"
evidence=IEA] [GO:0031594 "neuromuscular junction" evidence=IEA]
[GO:0032154 "cleavage furrow" evidence=IEA] [GO:0043025 "neuronal
cell body" evidence=IEA] [GO:0043197 "dendritic spine"
evidence=IEA] [GO:0043531 "ADP binding" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0051015 "actin filament binding" evidence=IEA] [GO:0055003
"cardiac myofibril assembly" evidence=IEA] [GO:0055015 "ventricular
cardiac muscle cell development" evidence=IEA] [GO:0060041 "retina
development in camera-type eye" evidence=IEA] InterPro:IPR000048
InterPro:IPR001609 InterPro:IPR002928 InterPro:IPR004009
InterPro:IPR008989 Pfam:PF00063 Pfam:PF00612 Pfam:PF01576
Pfam:PF02736 PRINTS:PR00193 PROSITE:PS50096 SMART:SM00015
SMART:SM00242 RGD:71000 GO:GO:0005524 EMBL:CH473948 GO:GO:0003774
GO:GO:0016459 GeneTree:ENSGT00650000092896 SUPFAM:SSF50084
UniGene:Rn.98166 ProteinModelPortal:G3V9Y1
Ensembl:ENSRNOT00000065895 Uniprot:G3V9Y1
Length = 1976
Score = 151 (58.2 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 142/743 (19%), Positives = 279/743 (37%)
Query: 188 EKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYD 247
EK+S+ K K+ D +L+AL E E ++ + EL K E +L
Sbjct: 1130 EKASRNKA----EKQKRDLSEELEALKTELEDTLDTTAAQQELRTKREQEVAEL------ 1179
Query: 248 MKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENSK 307
KKA L E S+ +E K+ KA L+ K L +N +
Sbjct: 1180 -KKALEDETKNHEAQIQDMRQRHATALEELSEQLEQAKRFKANLE---KNKQGLETDNKE 1235
Query: 308 RRMDFLEKVDQGVQVQGKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPAYEPPH 367
+ KV Q V+ + ++K R + +
Sbjct: 1236 LACEV--KVLQQVKAESEHKRKKLDAQVQELHAKVSEGDRLRVELAEKANKLQNELDNVS 1293
Query: 368 DKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALR 427
+E+ + ++ A Q + +++L + S R++ +E++ N L
Sbjct: 1294 TLLEEAEKKGMKFAKDAAGLESQLQDTQELLQEETRQKLNLSSRIRQLEEEKNSLQEQQE 1353
Query: 428 NS--GAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLED--HVGHYIWKSF 483
+N+ + LQ + K+ L + A L+D + + +
Sbjct: 1354 EEEEARKNLEKQVLALQSQLADTKKKVDDD-LGTIEGLEEAKKKLLKDVEALSQRLEEKV 1412
Query: 484 ITQDAGDR--DFLAKNLKPFDVPI---LNYVSNESSRKEPF-QISEEMRALGISARLDQV 537
+ D ++ + L + L V + VSN +++ F Q+ E + GISAR +
Sbjct: 1413 LAYDKLEKTKNRLQQELDDLTVDLDHQRQIVSNLEKKQKKFDQLLAEEK--GISARYAEE 1470
Query: 538 FDAPHA-VKEVLISQFGLDSSY---IGSKETDQKADNVAKLGILDFWTPENHYRWSISRY 593
D A +E L + + +KE ++ + + + D + ++ ++
Sbjct: 1471 RDRAEAEAREKETKALSLARALEEALEAKEEFERQNKQLRADMEDLMSSKDDVGKNVHEL 1530
Query: 594 GGHVSASVEPVNQSRLLLCSVDGNXXXXXXXXXXXXXXXXXXXXXXXXXMQTEQRLIEDE 653
A + V + R L ++ +QT E++
Sbjct: 1531 EKSKRALEQQVEEMRTQLEELEDELQATEDAKLRLEVNMQAMKAQFERDLQTRDEQNEEK 1590
Query: 654 AAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKE-DDINTALAKLVDQAADL 712
L K+ E+ ++ E+++R + L+ +E + + N A +++ Q L
Sbjct: 1591 KRLLLKQVRELEAELEDERKQRALAVASKKKMEIDLKDLEAQIEAANKARDEVIKQLRKL 1650
Query: 713 NIQQFKYAIEIKNLLV--EIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASL 770
Q Y E++ + + + +EK + S+E A+I +L+ L E+ A
Sbjct: 1651 QAQMKDYQRELEEARASRDEIFAQSKESEKKLKSLE--AEILQLQEELASSERARRHAEQ 1708
Query: 771 HYEDCKKEVEHC---RKHLSDAKRQAES-IAFITPELEKEFLEMPTTIEELEAAIQDNIS 826
++ E+ + + L D KR+ E+ IA + ELE+E + +E L +
Sbjct: 1709 ERDELADEIANSASGKSALLDEKRRLEARIAQLEEELEEE----QSNMELLNDRFRKTTL 1764
Query: 827 QANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEID-ALKEKWLPTLRNL- 884
Q ++ LN + E Q+ ++ + E KELK L E++ A+K K+ T+ L
Sbjct: 1765 QVDT---LNTELAAERSAAQKS-DNARQQLERQNKELKAKLQELEGAVKSKFKATISALE 1820
Query: 885 --VAQINETFSRNFQEMAVAGEV 905
+ Q+ E + +E A A ++
Sbjct: 1821 AKIGQLEEQLEQEAKERAAANKL 1843
Score = 115 (45.5 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 52/216 (24%), Positives = 96/216 (44%)
Query: 653 EAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALA--KLVDQAA 710
++A L ++R I Q+E+ E N L R ++ + D +NT LA + Q +
Sbjct: 1724 KSALLDEKRRLEARIAQLEEELEEEQSNMELLNDRFRKTTLQVDTLNTELAAERSAAQKS 1783
Query: 711 DLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIE-FDAKIRELEFNLKQHEKLALQAS 769
D QQ + + K L ++ + + K A+I +AKI +LE L+Q K A+
Sbjct: 1784 DNARQQLER--QNKELKAKLQELEGAVKSKFKATISALEAKIGQLEEQLEQEAKERAAAN 1841
Query: 770 LHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQAN 829
+K+++ + D +R A+ ++EK M +LE A ++ ++AN
Sbjct: 1842 KLVRRTEKKLKEIFMQVEDERRHADQYK---EQMEKANARMKQLKRQLEEA-EEEATRAN 1897
Query: 830 SIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKR 865
+ + + +E + E LS + K L+R
Sbjct: 1898 AS---RRKLQRELDDATEANEGLSREVSTLKNRLRR 1930
Score = 76 (31.8 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 42/153 (27%), Positives = 60/153 (39%)
Query: 85 KRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVN 144
KR +E +K +L +TK I D R + E LE KRF +
Sbjct: 1171 KREQEVAELKKALEDETKNHEAQIQ---DMRQRHATALE----ELSEQLEQAKRFKANLE 1223
Query: 145 NLTQFLPQDR---VCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVK 201
Q L D CE L VK E ++ D Q+ H A V + +L+ +E K
Sbjct: 1224 KNKQGLETDNKELACEVKVLQQVKAESEHKRKKLDAQVQELH-AKVSEGDRLR-VELAEK 1281
Query: 202 RNG--DTLNQLKALNVEQEKDVERVRQRAELLE 232
N + L+ + L E EK + + A LE
Sbjct: 1282 ANKLQNELDNVSTLLEEAEKKGMKFAKDAAGLE 1314
Score = 47 (21.6 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 31/150 (20%), Positives = 69/150 (46%)
Query: 102 KEEHLTIMRKIDTR-----NKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQFLPQDRVC 156
K+E I+ +++R +++ N K + + ++ ++ + + Q L ++V
Sbjct: 917 KQELEEILHDLESRVEEEEERNQILQNEKKKMQAHIQDLEEQLD-EEEGARQKLQLEKVT 975
Query: 157 EFAKLSPVK----LLEE-TEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLK 211
AK+ ++ LLE+ K + + +L A E SS+L E K N+ +
Sbjct: 976 AEAKIKKMEEEVLLLEDQNSKFIKEKKLMEDRIA--ECSSQLAEEEEKAKNLAKIRNKQE 1033
Query: 212 ALNVEQEKDVERVRQRAELLEKVESMKKKL 241
+ + E ER+++ + +++E K+KL
Sbjct: 1034 VMISDLE---ERLKKEEKTRQELEKAKRKL 1060
>UNIPROTKB|F1LMQ5 [details] [associations]
symbol:Myh10 "Myosin-10" species:10116 "Rattus norvegicus"
[GO:0000146 "microfilament motor activity" evidence=IEA]
[GO:0000281 "cytokinesis after mitosis" evidence=IEA] [GO:0001701
"in utero embryonic development" evidence=IEA] [GO:0001725 "stress
fiber" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001778 "plasma membrane repair" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005938 "cell
cortex" evidence=IEA] [GO:0006887 "exocytosis" evidence=IEA]
[GO:0006930 "substrate-dependent cell migration, cell extension"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=IEA]
[GO:0007411 "axon guidance" evidence=IEA] [GO:0007512 "adult heart
development" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0008360 "regulation of cell shape" evidence=IEA]
[GO:0016460 "myosin II complex" evidence=IEA] [GO:0021592 "fourth
ventricle development" evidence=IEA] [GO:0021670 "lateral ventricle
development" evidence=IEA] [GO:0021678 "third ventricle
development" evidence=IEA] [GO:0021680 "cerebellar Purkinje cell
layer development" evidence=IEA] [GO:0030048 "actin filament-based
movement" evidence=IEA] [GO:0030424 "axon" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0030496 "midbody"
evidence=IEA] [GO:0030898 "actin-dependent ATPase activity"
evidence=IEA] [GO:0031594 "neuromuscular junction" evidence=IEA]
[GO:0032154 "cleavage furrow" evidence=IEA] [GO:0043025 "neuronal
cell body" evidence=IEA] [GO:0043197 "dendritic spine"
evidence=IEA] [GO:0043531 "ADP binding" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0051015 "actin filament binding" evidence=IEA] [GO:0055003
"cardiac myofibril assembly" evidence=IEA] [GO:0055015 "ventricular
cardiac muscle cell development" evidence=IEA] [GO:0060041 "retina
development in camera-type eye" evidence=IEA] InterPro:IPR000048
InterPro:IPR001609 InterPro:IPR002928 InterPro:IPR004009
Pfam:PF00063 Pfam:PF00612 Pfam:PF01576 Pfam:PF02736 PRINTS:PR00193
PROSITE:PS50096 SMART:SM00015 SMART:SM00242 RGD:71000 GO:GO:0005524
GO:GO:0003774 GO:GO:0016459 IPI:IPI00211813 PRIDE:F1LMQ5
Ensembl:ENSRNOT00000003983 ArrayExpress:F1LMQ5 Uniprot:F1LMQ5
Length = 2009
Score = 151 (58.2 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 142/743 (19%), Positives = 279/743 (37%)
Query: 188 EKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYD 247
EK+S+ K K+ D +L+AL E E ++ + EL K E +L
Sbjct: 1163 EKASRNKA----EKQKRDLSEELEALKTELEDTLDTTAAQQELRTKREQEVAEL------ 1212
Query: 248 MKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENSK 307
KKA L E S+ +E K+ KA L+ K L +N +
Sbjct: 1213 -KKALEDETKNHEAQIQDMRQRHATALEELSEQLEQAKRFKANLE---KNKQGLETDNKE 1268
Query: 308 RRMDFLEKVDQGVQVQGKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPAYEPPH 367
+ KV Q V+ + ++K R + +
Sbjct: 1269 LACEV--KVLQQVKAESEHKRKKLDAQVQELHAKVSEGDRLRVELAEKANKLQNELDNVS 1326
Query: 368 DKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALR 427
+E+ + ++ A Q + +++L + S R++ +E++ N L
Sbjct: 1327 TLLEEAEKKGMKFAKDAAGLESQLQDTQELLQEETRQKLNLSSRIRQLEEEKNSLQEQQE 1386
Query: 428 NS--GAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLED--HVGHYIWKSF 483
+N+ + LQ + K+ L + A L+D + + +
Sbjct: 1387 EEEEARKNLEKQVLALQSQLADTKKKVDDD-LGTIEGLEEAKKKLLKDVEALSQRLEEKV 1445
Query: 484 ITQDAGDR--DFLAKNLKPFDVPI---LNYVSNESSRKEPF-QISEEMRALGISARLDQV 537
+ D ++ + L + L V + VSN +++ F Q+ E + GISAR +
Sbjct: 1446 LAYDKLEKTKNRLQQELDDLTVDLDHQRQIVSNLEKKQKKFDQLLAEEK--GISARYAEE 1503
Query: 538 FDAPHA-VKEVLISQFGLDSSY---IGSKETDQKADNVAKLGILDFWTPENHYRWSISRY 593
D A +E L + + +KE ++ + + + D + ++ ++
Sbjct: 1504 RDRAEAEAREKETKALSLARALEEALEAKEEFERQNKQLRADMEDLMSSKDDVGKNVHEL 1563
Query: 594 GGHVSASVEPVNQSRLLLCSVDGNXXXXXXXXXXXXXXXXXXXXXXXXXMQTEQRLIEDE 653
A + V + R L ++ +QT E++
Sbjct: 1564 EKSKRALEQQVEEMRTQLEELEDELQATEDAKLRLEVNMQAMKAQFERDLQTRDEQNEEK 1623
Query: 654 AAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKE-DDINTALAKLVDQAADL 712
L K+ E+ ++ E+++R + L+ +E + + N A +++ Q L
Sbjct: 1624 KRLLLKQVRELEAELEDERKQRALAVASKKKMEIDLKDLEAQIEAANKARDEVIKQLRKL 1683
Query: 713 NIQQFKYAIEIKNLLV--EIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASL 770
Q Y E++ + + + +EK + S+E A+I +L+ L E+ A
Sbjct: 1684 QAQMKDYQRELEEARASRDEIFAQSKESEKKLKSLE--AEILQLQEELASSERARRHAEQ 1741
Query: 771 HYEDCKKEVEHC---RKHLSDAKRQAES-IAFITPELEKEFLEMPTTIEELEAAIQDNIS 826
++ E+ + + L D KR+ E+ IA + ELE+E + +E L +
Sbjct: 1742 ERDELADEIANSASGKSALLDEKRRLEARIAQLEEELEEE----QSNMELLNDRFRKTTL 1797
Query: 827 QANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEID-ALKEKWLPTLRNL- 884
Q ++ LN + E Q+ ++ + E KELK L E++ A+K K+ T+ L
Sbjct: 1798 QVDT---LNTELAAERSAAQKS-DNARQQLERQNKELKAKLQELEGAVKSKFKATISALE 1853
Query: 885 --VAQINETFSRNFQEMAVAGEV 905
+ Q+ E + +E A A ++
Sbjct: 1854 AKIGQLEEQLEQEAKERAAANKL 1876
Score = 115 (45.5 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 52/216 (24%), Positives = 96/216 (44%)
Query: 653 EAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALA--KLVDQAA 710
++A L ++R I Q+E+ E N L R ++ + D +NT LA + Q +
Sbjct: 1757 KSALLDEKRRLEARIAQLEEELEEEQSNMELLNDRFRKTTLQVDTLNTELAAERSAAQKS 1816
Query: 711 DLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIE-FDAKIRELEFNLKQHEKLALQAS 769
D QQ + + K L ++ + + K A+I +AKI +LE L+Q K A+
Sbjct: 1817 DNARQQLER--QNKELKAKLQELEGAVKSKFKATISALEAKIGQLEEQLEQEAKERAAAN 1874
Query: 770 LHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQAN 829
+K+++ + D +R A+ ++EK M +LE A ++ ++AN
Sbjct: 1875 KLVRRTEKKLKEIFMQVEDERRHADQYK---EQMEKANARMKQLKRQLEEA-EEEATRAN 1930
Query: 830 SIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKR 865
+ + + +E + E LS + K L+R
Sbjct: 1931 AS---RRKLQRELDDATEANEGLSREVSTLKNRLRR 1963
Score = 76 (31.8 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 42/153 (27%), Positives = 60/153 (39%)
Query: 85 KRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVN 144
KR +E +K +L +TK I D R + E LE KRF +
Sbjct: 1204 KREQEVAELKKALEDETKNHEAQIQ---DMRQRHATALE----ELSEQLEQAKRFKANLE 1256
Query: 145 NLTQFLPQDR---VCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVK 201
Q L D CE L VK E ++ D Q+ H A V + +L+ +E K
Sbjct: 1257 KNKQGLETDNKELACEVKVLQQVKAESEHKRKKLDAQVQELH-AKVSEGDRLR-VELAEK 1314
Query: 202 RNG--DTLNQLKALNVEQEKDVERVRQRAELLE 232
N + L+ + L E EK + + A LE
Sbjct: 1315 ANKLQNELDNVSTLLEEAEKKGMKFAKDAAGLE 1347
Score = 47 (21.6 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 31/150 (20%), Positives = 69/150 (46%)
Query: 102 KEEHLTIMRKIDTR-----NKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQFLPQDRVC 156
K+E I+ +++R +++ N K + + ++ ++ + + Q L ++V
Sbjct: 950 KQELEEILHDLESRVEEEEERNQILQNEKKKMQAHIQDLEEQLD-EEEGARQKLQLEKVT 1008
Query: 157 EFAKLSPVK----LLEE-TEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLK 211
AK+ ++ LLE+ K + + +L A E SS+L E K N+ +
Sbjct: 1009 AEAKIKKMEEEVLLLEDQNSKFIKEKKLMEDRIA--ECSSQLAEEEEKAKNLAKIRNKQE 1066
Query: 212 ALNVEQEKDVERVRQRAELLEKVESMKKKL 241
+ + E ER+++ + +++E K+KL
Sbjct: 1067 VMISDLE---ERLKKEEKTRQELEKAKRKL 1093
>UNIPROTKB|F1LQ02 [details] [associations]
symbol:Myh10 "Myosin-10" species:10116 "Rattus norvegicus"
[GO:0000146 "microfilament motor activity" evidence=IEA]
[GO:0000281 "cytokinesis after mitosis" evidence=IEA] [GO:0001701
"in utero embryonic development" evidence=IEA] [GO:0001725 "stress
fiber" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001778 "plasma membrane repair" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005938 "cell
cortex" evidence=IEA] [GO:0006887 "exocytosis" evidence=IEA]
[GO:0006930 "substrate-dependent cell migration, cell extension"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=IEA]
[GO:0007411 "axon guidance" evidence=IEA] [GO:0007512 "adult heart
development" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0008360 "regulation of cell shape" evidence=IEA]
[GO:0016460 "myosin II complex" evidence=IEA] [GO:0021592 "fourth
ventricle development" evidence=IEA] [GO:0021670 "lateral ventricle
development" evidence=IEA] [GO:0021678 "third ventricle
development" evidence=IEA] [GO:0021680 "cerebellar Purkinje cell
layer development" evidence=IEA] [GO:0030048 "actin filament-based
movement" evidence=IEA] [GO:0030424 "axon" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0030496 "midbody"
evidence=IEA] [GO:0030898 "actin-dependent ATPase activity"
evidence=IEA] [GO:0031594 "neuromuscular junction" evidence=IEA]
[GO:0032154 "cleavage furrow" evidence=IEA] [GO:0043025 "neuronal
cell body" evidence=IEA] [GO:0043197 "dendritic spine"
evidence=IEA] [GO:0043531 "ADP binding" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0051015 "actin filament binding" evidence=IEA] [GO:0055003
"cardiac myofibril assembly" evidence=IEA] [GO:0055015 "ventricular
cardiac muscle cell development" evidence=IEA] [GO:0060041 "retina
development in camera-type eye" evidence=IEA] InterPro:IPR000048
InterPro:IPR001609 InterPro:IPR002928 InterPro:IPR004009
InterPro:IPR008989 Pfam:PF00063 Pfam:PF00612 Pfam:PF01576
Pfam:PF02736 PRINTS:PR00193 PROSITE:PS50096 SMART:SM00015
SMART:SM00242 RGD:71000 GO:GO:0005886 GO:GO:0005524 GO:GO:0005938
GO:GO:0007411 GO:GO:0001764 GO:GO:0005819 GO:GO:0008360
GO:GO:0008283 GO:GO:0030424 GO:GO:0043025 GO:GO:0001701
GO:GO:0043197 GO:GO:0031594 GO:GO:0050885 GO:GO:0043531
GO:GO:0030426 GO:GO:0060041 GO:GO:0000281 GO:GO:0000146
GO:GO:0001725 GO:GO:0055003 GO:GO:0006887 GO:GO:0007512
GO:GO:0030496 GO:GO:0032154 GO:GO:0030048 GO:GO:0021670
GO:GO:0007097 GO:GO:0055015 GO:GO:0021680 GO:GO:0001778
GO:GO:0006930 GO:GO:0021678 GO:GO:0021592 GO:GO:0016460
GO:GO:0030898 OMA:DKNVHEL SUPFAM:SSF50084 IPI:IPI00391300
Ensembl:ENSRNOT00000030500 ArrayExpress:F1LQ02 Uniprot:F1LQ02
Length = 2013
Score = 151 (58.2 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 142/743 (19%), Positives = 279/743 (37%)
Query: 188 EKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYD 247
EK+S+ K K+ D +L+AL E E ++ + EL K E +L
Sbjct: 1167 EKASRNKA----EKQKRDLSEELEALKTELEDTLDTTAAQQELRTKREQEVAEL------ 1216
Query: 248 MKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENSK 307
KKA L E S+ +E K+ KA L+ K L +N +
Sbjct: 1217 -KKALEDETKNHEAQIQDMRQRHATALEELSEQLEQAKRFKANLE---KNKQGLETDNKE 1272
Query: 308 RRMDFLEKVDQGVQVQGKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPAYEPPH 367
+ KV Q V+ + ++K R + +
Sbjct: 1273 LACEV--KVLQQVKAESEHKRKKLDAQVQELHAKVSEGDRLRVELAEKANKLQNELDNVS 1330
Query: 368 DKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALR 427
+E+ + ++ A Q + +++L + S R++ +E++ N L
Sbjct: 1331 TLLEEAEKKGMKFAKDAAGLESQLQDTQELLQEETRQKLNLSSRIRQLEEEKNSLQEQQE 1390
Query: 428 NS--GAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLED--HVGHYIWKSF 483
+N+ + LQ + K+ L + A L+D + + +
Sbjct: 1391 EEEEARKNLEKQVLALQSQLADTKKKVDDD-LGTIEGLEEAKKKLLKDVEALSQRLEEKV 1449
Query: 484 ITQDAGDR--DFLAKNLKPFDVPI---LNYVSNESSRKEPF-QISEEMRALGISARLDQV 537
+ D ++ + L + L V + VSN +++ F Q+ E + GISAR +
Sbjct: 1450 LAYDKLEKTKNRLQQELDDLTVDLDHQRQIVSNLEKKQKKFDQLLAEEK--GISARYAEE 1507
Query: 538 FDAPHA-VKEVLISQFGLDSSY---IGSKETDQKADNVAKLGILDFWTPENHYRWSISRY 593
D A +E L + + +KE ++ + + + D + ++ ++
Sbjct: 1508 RDRAEAEAREKETKALSLARALEEALEAKEEFERQNKQLRADMEDLMSSKDDVGKNVHEL 1567
Query: 594 GGHVSASVEPVNQSRLLLCSVDGNXXXXXXXXXXXXXXXXXXXXXXXXXMQTEQRLIEDE 653
A + V + R L ++ +QT E++
Sbjct: 1568 EKSKRALEQQVEEMRTQLEELEDELQATEDAKLRLEVNMQAMKAQFERDLQTRDEQNEEK 1627
Query: 654 AAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKE-DDINTALAKLVDQAADL 712
L K+ E+ ++ E+++R + L+ +E + + N A +++ Q L
Sbjct: 1628 KRLLLKQVRELEAELEDERKQRALAVASKKKMEIDLKDLEAQIEAANKARDEVIKQLRKL 1687
Query: 713 NIQQFKYAIEIKNLLV--EIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASL 770
Q Y E++ + + + +EK + S+E A+I +L+ L E+ A
Sbjct: 1688 QAQMKDYQRELEEARASRDEIFAQSKESEKKLKSLE--AEILQLQEELASSERARRHAEQ 1745
Query: 771 HYEDCKKEVEHC---RKHLSDAKRQAES-IAFITPELEKEFLEMPTTIEELEAAIQDNIS 826
++ E+ + + L D KR+ E+ IA + ELE+E + +E L +
Sbjct: 1746 ERDELADEIANSASGKSALLDEKRRLEARIAQLEEELEEE----QSNMELLNDRFRKTTL 1801
Query: 827 QANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEID-ALKEKWLPTLRNL- 884
Q ++ LN + E Q+ ++ + E KELK L E++ A+K K+ T+ L
Sbjct: 1802 QVDT---LNTELAAERSAAQKS-DNARQQLERQNKELKAKLQELEGAVKSKFKATISALE 1857
Query: 885 --VAQINETFSRNFQEMAVAGEV 905
+ Q+ E + +E A A ++
Sbjct: 1858 AKIGQLEEQLEQEAKERAAANKL 1880
Score = 115 (45.5 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 52/216 (24%), Positives = 96/216 (44%)
Query: 653 EAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALA--KLVDQAA 710
++A L ++R I Q+E+ E N L R ++ + D +NT LA + Q +
Sbjct: 1761 KSALLDEKRRLEARIAQLEEELEEEQSNMELLNDRFRKTTLQVDTLNTELAAERSAAQKS 1820
Query: 711 DLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIE-FDAKIRELEFNLKQHEKLALQAS 769
D QQ + + K L ++ + + K A+I +AKI +LE L+Q K A+
Sbjct: 1821 DNARQQLER--QNKELKAKLQELEGAVKSKFKATISALEAKIGQLEEQLEQEAKERAAAN 1878
Query: 770 LHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQAN 829
+K+++ + D +R A+ ++EK M +LE A ++ ++AN
Sbjct: 1879 KLVRRTEKKLKEIFMQVEDERRHADQYK---EQMEKANARMKQLKRQLEEA-EEEATRAN 1934
Query: 830 SIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKR 865
+ + + +E + E LS + K L+R
Sbjct: 1935 AS---RRKLQRELDDATEANEGLSREVSTLKNRLRR 1967
Score = 76 (31.8 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 42/153 (27%), Positives = 60/153 (39%)
Query: 85 KRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVN 144
KR +E +K +L +TK I D R + E LE KRF +
Sbjct: 1208 KREQEVAELKKALEDETKNHEAQIQ---DMRQRHATALE----ELSEQLEQAKRFKANLE 1260
Query: 145 NLTQFLPQDR---VCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVK 201
Q L D CE L VK E ++ D Q+ H A V + +L+ +E K
Sbjct: 1261 KNKQGLETDNKELACEVKVLQQVKAESEHKRKKLDAQVQELH-AKVSEGDRLR-VELAEK 1318
Query: 202 RNG--DTLNQLKALNVEQEKDVERVRQRAELLE 232
N + L+ + L E EK + + A LE
Sbjct: 1319 ANKLQNELDNVSTLLEEAEKKGMKFAKDAAGLE 1351
Score = 47 (21.6 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 31/150 (20%), Positives = 69/150 (46%)
Query: 102 KEEHLTIMRKIDTR-----NKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQFLPQDRVC 156
K+E I+ +++R +++ N K + + ++ ++ + + Q L ++V
Sbjct: 954 KQELEEILHDLESRVEEEEERNQILQNEKKKMQAHIQDLEEQLD-EEEGARQKLQLEKVT 1012
Query: 157 EFAKLSPVK----LLEE-TEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLK 211
AK+ ++ LLE+ K + + +L A E SS+L E K N+ +
Sbjct: 1013 AEAKIKKMEEEVLLLEDQNSKFIKEKKLMEDRIA--ECSSQLAEEEEKAKNLAKIRNKQE 1070
Query: 212 ALNVEQEKDVERVRQRAELLEKVESMKKKL 241
+ + E ER+++ + +++E K+KL
Sbjct: 1071 VMISDLE---ERLKKEEKTRQELEKAKRKL 1097
>DICTYBASE|DDB_G0286355 [details] [associations]
symbol:mhcA "myosin heavy chain" species:44689
"Dictyostelium discoideum" [GO:0032009 "early phagosome"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0071889 "14-3-3 protein binding" evidence=IPI] [GO:0000910
"cytokinesis" evidence=IGI;IMP] [GO:0033275 "actin-myosin filament
sliding" evidence=IDA] [GO:0030898 "actin-dependent ATPase
activity" evidence=IDA] [GO:0000146 "microfilament motor activity"
evidence=IDA] [GO:0051015 "actin filament binding"
evidence=IEA;IDA] [GO:0060328 "cytoplasmic actin-based contraction
involved in forward cell motility" evidence=IMP] [GO:0034461
"uropod retraction" evidence=IMP] [GO:0031270 "pseudopodium
retraction" evidence=IMP] [GO:0030866 "cortical actin cytoskeleton
organization" evidence=IDA] [GO:0005938 "cell cortex"
evidence=IEA;IDA] [GO:0032060 "bleb assembly" evidence=IMP]
[GO:0006935 "chemotaxis" evidence=IMP] [GO:0008104 "protein
localization" evidence=IMP] [GO:0030837 "negative regulation of
actin filament polymerization" evidence=IMP] [GO:0030038
"contractile actin filament bundle assembly" evidence=IMP]
[GO:0046847 "filopodium assembly" evidence=IMP] [GO:0003774 "motor
activity" evidence=IEA;IDA] [GO:0001931 "uropod" evidence=IDA]
[GO:0005524 "ATP binding" evidence=IEA;IDA] [GO:0030554 "adenyl
nucleotide binding" evidence=IDA] [GO:0006928 "cellular component
movement" evidence=IGI;IMP] [GO:0005826 "actomyosin contractile
ring" evidence=IDA] [GO:0032154 "cleavage furrow" evidence=IDA]
[GO:0031143 "pseudopodium" evidence=IDA] [GO:0005856 "cytoskeleton"
evidence=IDA] [GO:0031154 "culmination involved in sorocarp
development" evidence=IMP] [GO:0042803 "protein homodimerization
activity" evidence=IDA] [GO:0045179 "apical cortex" evidence=IDA]
[GO:0016459 "myosin complex" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005516 "calmodulin binding" evidence=IEA]
[GO:0003779 "actin binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0031254 "trailing edge" evidence=IDA]
[GO:0042641 "actomyosin" evidence=IDA] [GO:0032982 "myosin
filament" evidence=IDA] [GO:0031034 "myosin filament assembly"
evidence=IDA] [GO:0016460 "myosin II complex" evidence=IDA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR000048
InterPro:IPR001609 InterPro:IPR002928 InterPro:IPR004009
InterPro:IPR008989 Pfam:PF00063 Pfam:PF01576 Pfam:PF02736
PRINTS:PR00193 PROSITE:PS50096 SMART:SM00015 SMART:SM00242
dictyBase:DDB_G0286355 GO:GO:0005524 GO:GO:0042803 GO:GO:0008104
GenomeReviews:CM000153_GR GO:GO:0031034 GO:GO:0030866 GO:GO:0051015
GO:GO:0006935 GO:GO:0000910 GO:GO:0045179 GO:GO:0032009
GO:GO:0000146 GO:GO:0033275 PDB:1G8X PDBsum:1G8X GO:GO:0005826
EMBL:AAFI02000085 GO:GO:0030837 GO:GO:0046847 GO:GO:0031154
GO:GO:0032060 eggNOG:COG5022 GO:GO:0001931 GO:GO:0042641 PDB:2AKA
PDBsum:2AKA PDB:1JWY PDB:1JX2 PDBsum:1JWY PDBsum:1JX2 GO:GO:0016460
GO:GO:0030898 GO:GO:0032982 KO:K10352 SUPFAM:SSF50084 EMBL:M14628
PIR:A26655 RefSeq:XP_637740.1 PDB:1D0X PDB:1D0Y PDB:1D0Z PDB:1D1A
PDB:1D1B PDB:1D1C PDB:1FMV PDB:1FMW PDB:1LVK PDB:1MMA PDB:1MMD
PDB:1MMG PDB:1MMN PDB:1MND PDB:1MNE PDB:1Q5G PDB:1VOM PDB:1W9I
PDB:1W9J PDB:1W9K PDB:1W9L PDB:1YV3 PDB:2JHR PDB:2JJ9 PDB:2X9H
PDB:2XEL PDB:2XO8 PDB:2Y0R PDB:2Y8I PDB:2Y9E PDB:3BZ7 PDB:3BZ8
PDB:3BZ9 PDB:3MJX PDB:3MKD PDB:3MNQ PDB:3MYH PDB:3MYK PDB:3MYL
PDB:4AE3 PDBsum:1D0X PDBsum:1D0Y PDBsum:1D0Z PDBsum:1D1A
PDBsum:1D1B PDBsum:1D1C PDBsum:1FMV PDBsum:1FMW PDBsum:1LVK
PDBsum:1MMA PDBsum:1MMD PDBsum:1MMG PDBsum:1MMN PDBsum:1MND
PDBsum:1MNE PDBsum:1Q5G PDBsum:1VOM PDBsum:1W9I PDBsum:1W9J
PDBsum:1W9K PDBsum:1W9L PDBsum:1YV3 PDBsum:2JHR PDBsum:2JJ9
PDBsum:2X9H PDBsum:2XEL PDBsum:2XO8 PDBsum:2Y0R PDBsum:2Y8I
PDBsum:2Y9E PDBsum:3BZ7 PDBsum:3BZ8 PDBsum:3BZ9 PDBsum:3MJX
PDBsum:3MKD PDBsum:3MNQ PDBsum:3MYH PDBsum:3MYK PDBsum:3MYL
PDBsum:4AE3 ProteinModelPortal:P08799 SMR:P08799 DIP:DIP-46078N
IntAct:P08799 STRING:P08799 PRIDE:P08799 EnsemblProtists:DDB0191444
GeneID:8625606 KEGG:ddi:DDB_G0286355 OMA:NTMFILE
ProtClustDB:CLSZ2430102 EvolutionaryTrace:P08799 GO:GO:0030038
GO:GO:0060328 GO:GO:0031270 GO:GO:0034461 Uniprot:P08799
Length = 2116
Score = 116 (45.9 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 54/228 (23%), Positives = 107/228 (46%)
Query: 644 QTEQRLIEDEAAK-LQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTAL 702
+ EQ DEA K L + + + ++ EK+K E E K++LES E ED +
Sbjct: 1746 EVEQNTKLDEAKKKLTDDVDTLKKQLEDEKKKLNESER----AKKRLES-ENEDFLAKLD 1800
Query: 703 AKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHE 762
A++ +++ ++ KY ++K+ ++ + + + + + + +I EL L+Q +
Sbjct: 1801 AEVKNRSRAEKDRK-KYEKDLKDTKYKLNDEAATKTQTEIGAAKLEDQIDELRSKLEQEQ 1859
Query: 763 KLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQ 822
A QA + + E+++ R + D + + LE E E+ T+EE E
Sbjct: 1860 AKATQADKSKKTLEGEIDNLRAQIEDEGKIKMRLEKEKRALEGELEELRETVEEAE---- 1915
Query: 823 DNISQANSIFFLNQNILQEYEHR-QRQIEDLSTKQEADKKELKRFLAE 869
D+ S+A L + L++ Q++I+ ++A K L+R + E
Sbjct: 1916 DSKSEAEQSKRLVELELEDARRNLQKEIDAKEIAEDA-KSNLQREIVE 1962
Score = 110 (43.8 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 51/243 (20%), Positives = 117/243 (48%)
Query: 652 DEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRK---LESIEKE-DDINTALAKLVD 707
++ ++++ EE+ + + + + I +K LES++ E D N A AK
Sbjct: 1448 EQYVQIKRLNEELSELRSVLEEADERCNSAIKAKKTAESALESLKDEIDAANNAKAKAER 1507
Query: 708 QAADLNIQ--QFKYAIEIKN--LLVEIVSCKWSYAEKHMASI--EFDAKIRELEFNLKQH 761
++ +L ++ + + ++E K+ + VE + K + + A + E +++I+ E
Sbjct: 1508 KSKELEVRVAELEESLEDKSGTVNVEFIRKKDAEIDDLRARLDRETESRIKSDEDKKNTR 1567
Query: 762 EKLA-LQASLHYEDCKKEV---EHCRKHLS----DAKRQAESIAFITPELEKEFLEMPTT 813
++ A L+A + E+ ++EV + +K L D Q ++ ++EK ++ T
Sbjct: 1568 KQFADLEAKV--EEAQREVVTIDRLKKKLESDIIDLSTQLDTETKSRIKIEKSKKKLEQT 1625
Query: 814 IEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDAL 873
+ E AA + + A+ + + + QE + + Q++ A +K++K +AE+D +
Sbjct: 1626 LAERRAAEEGSSKAADEE--IRKQVWQEVDELRAQLDSERAALNASEKKIKSLVAEVDEV 1683
Query: 874 KEK 876
KE+
Sbjct: 1684 KEQ 1686
Score = 110 (43.8 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 60/291 (20%), Positives = 127/291 (43%)
Query: 651 EDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKE-DDINTALAKLVDQA 709
E L+KE E+ + ++ E ++ + N ++ +L+ I+++ D+ ++ K V+Q
Sbjct: 1310 EKRKVDLEKEVSELKDQIEEEVASKKAVTEAKNKKESELDEIKRQYADVVSSRDKSVEQL 1369
Query: 710 ADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQAS 769
L Q K E++N E + AE+ EFD + E NL++ ++A
Sbjct: 1370 KTL---QAKNE-ELRNTAEEAEG-QLDRAERSKKKAEFD--LEEAVKNLEEETAKKVKAE 1422
Query: 770 LHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQAN 829
+ + + + L DAK + L +E E+ + +EE + I
Sbjct: 1423 KAMKKAETDYRSTKSELDDAKNVSSEQYVQIKRLNEELSELRSVLEEADERCNSAIKAKK 1482
Query: 830 SIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEID-ALKEKW----LPTLRNL 884
+ ++ L+ + + K E KEL+ +AE++ +L++K + +R
Sbjct: 1483 TA----ESALESLKDEIDAANNAKAKAERKSKELEVRVAELEESLEDKSGTVNVEFIRKK 1538
Query: 885 VAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVLS 935
A+I++ +R +E + DE + + K ++ K ++ Q EV++
Sbjct: 1539 DAEIDDLRARLDRE--TESRIKSDEDKKNTRKQFADLEAKVEEA-QREVVT 1586
Score = 83 (34.3 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 71/339 (20%), Positives = 132/339 (38%)
Query: 109 MRKIDT--RNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQFLPQ-DRVCEFAKLSPVK 165
M+K +T R+ + K V + ++I KR N +++ L L + D C A + K
Sbjct: 1425 MKKAETDYRSTKSELDDAKNVSSEQYVQI-KRLNEELSELRSVLEEADERCNSA-IKAKK 1482
Query: 166 LLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKA-LNVE--QEKDVE 222
E +++ D ++ + A + K K +E V ++L +NVE ++KD E
Sbjct: 1483 TAESALESLKD-EIDAANNAKAKAERKSKELEVRVAELEESLEDKSGTVNVEFIRKKDAE 1541
Query: 223 RVRQRAELLEKVESMKKKLPWLKYDMKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIE 282
RA L + ES +K D K T+ K +E
Sbjct: 1542 IDDLRARLDRETESR------IKSDEDKKNTRKQFADLEAKVEEAQREVVTIDRLKKKLE 1595
Query: 283 GKKQEKAI-LDGDCKKLSSLINENSKRRMDFLEKVDQGVQVQGKYKXXXXXXXXXXXXXX 341
+ + LD + K S + E SK++++ ++ +G K
Sbjct: 1596 SDIIDLSTQLDTETK--SRIKIEKSKKKLE-QTLAERRAAEEGSSKAADEEIRKQVWQEV 1652
Query: 342 XILKARXXXXXXXXXXQTVPAYEPPHDKIEKLGSQILELGVQANQKRLQKSEKEKILNQN 401
L+A+ A KI+ L +++ E+ Q + L K + K
Sbjct: 1653 DELRAQLDSERA--------ALNASEKKIKSLVAEVDEVKEQLEDEILAKDKLVKAKRAL 1704
Query: 402 KLTLRQCSDRLKDMEDKNNKLLHALRN--SGAENIFEAY 438
++ L + D+L++ ED ++L + R + E+I + Y
Sbjct: 1705 EVELEEVRDQLEEEEDSRSELEDSKRRLTTEVEDIKKKY 1743
Score = 81 (33.6 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 64/309 (20%), Positives = 132/309 (42%)
Query: 129 KGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVK--LLEETE----KAVGDPQLPVQ 182
+ E+ ++T R + + + ++ L Q + E +L V+ L ET + + +L +
Sbjct: 1009 QSELDDLTVRLDSETKDKSELLRQKKKLE-EELKQVQEALAAETAAKLAQEAANKKLQGE 1067
Query: 183 HCALVEKSSKLKTIECTVKRNGDTL-NQLKALNVE---QEKDVERVRQRAELLEKV-ESM 237
+ L EK + T V+++ TL +QL A+N E ++K+ + + ++ + L+ + E M
Sbjct: 1068 YTELNEKFNSEVTARSNVEKSKKTLESQLVAVNNELDEEKKNRDALEKKKKALDAMLEEM 1127
Query: 238 KKKLPWLKYDMKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKK 297
K +L + KK+ Y N + E I ++ K+ L+G+ +
Sbjct: 1128 KDQLESTGGE-KKSLY----DLKVKQESDMEALRNQISELQSTIAKLEKIKSTLEGEVAR 1182
Query: 298 LSSLINENSKRRMDFLEKVDQGVQVQGKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXX 357
L + + + +EK + V++ + K LK +
Sbjct: 1183 LQGELEAEQLAKSN-VEKQKKKVELDLEDKSAQLAEETAAKQALDKLKKKLEQELSEVQT 1241
Query: 358 QTVPAYEPP--HDKIEK-LGSQI--LELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRL 412
Q A D K L + L+L ++A QK Q EK+++ +++L + +++L
Sbjct: 1242 QLSEANNKNVNSDSTNKHLETSFNNLKLELEAEQKAKQALEKKRLGLESEL--KHVNEQL 1299
Query: 413 KDMEDKNNK 421
+ E+K K
Sbjct: 1300 E--EEKKQK 1306
>UNIPROTKB|E1BAT8 [details] [associations]
symbol:KIF20B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005874 "microtubule" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0007018 "microtubule-based movement"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IEA] [GO:0003777 "microtubule motor activity"
evidence=IEA] InterPro:IPR001752 InterPro:IPR019821 Pfam:PF00225
PRINTS:PR00380 PROSITE:PS00411 PROSITE:PS50067 SMART:SM00129
GO:GO:0005524 GO:GO:0005875 GO:GO:0005874 GO:GO:0003777
GO:GO:0007018 Gene3D:3.40.850.10 GeneTree:ENSGT00530000063172
CTD:9585 OMA:KLGIKHQ EMBL:DAAA02058745 EMBL:DAAA02058746
IPI:IPI00699607 RefSeq:NP_001098728.1 UniGene:Bt.46840
ProteinModelPortal:E1BAT8 PRIDE:E1BAT8 Ensembl:ENSBTAT00000032984
GeneID:514679 KEGG:bta:514679 NextBio:20871459 Uniprot:E1BAT8
Length = 1788
Score = 142 (55.0 bits), Expect = 2.2e-05, Sum P(3) = 2.2e-05
Identities = 87/394 (22%), Positives = 166/394 (42%)
Query: 654 AAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAADL- 712
+AKL++E E +I+ ++R E + NL+ +SI+ D++ KL ++ L
Sbjct: 1148 SAKLEQEIMEKESIILKQERNLNECQ--ANLK----DSIQNARDLSEREVKLKEEIMQLT 1201
Query: 713 -NIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRE-LEFNLKQHEKLALQASL 770
N+Q K ++++K E W EK + + + L+ +L++ E+ +
Sbjct: 1202 KNLQDAKQSLQLKE---EEKERNWQETEKLKEELSASTTLTQNLKADLQRKEEDYAELKE 1258
Query: 771 HYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANS 830
D KK++E +K +S + + + + ELEK+ + I+ + IQ Q N
Sbjct: 1259 KLADAKKQIEQVQKEISVMRDEEKLLRIKINELEKKKNQCSQEIDMKQRTIQQLKEQLN- 1317
Query: 831 IFFLNQNILQEYEHRQRQIEDLSTKQEADK------KELKRFLAEIDALKEKWLPTLRNL 884
NQ + + + +R +DLS K++ K +E ++ E D + E L L
Sbjct: 1318 ----NQKVEEAIQQYERVCKDLSVKEKIIKDMQMTLEEQEQTQVEQDQVLEAKLEETERL 1373
Query: 885 VAQINETFSRNFQEM-AVAGEVSLDEHESDFDKFGI-LIKVKFRQSGQLEVLSAHHQSGG 942
++ E + ++++ A + S E E + D L K++ + A +
Sbjct: 1374 ATELEE-WKEKYKDLEAKHNQSSNKEFEDNTDVLNTKLSKLQDELQESEQKHEAERKKWL 1432
Query: 943 ERSVSTILYLVSLQDLTNCPFRVVDEINQG-MDPINERKMFQ-QLVRAASQPNTPQCFLL 1000
E + I ++L N + E + + NE ++ + QL A N Q
Sbjct: 1433 EEKMMLITQAKEAENLRNKEMKKYAEDREHCLKQQNEMEILKGQL--AEKDGNLQQWREE 1490
Query: 1001 TPKLLPDLEYS-EACSILNIMNGPWIEQPSKVWS 1033
+L+ LE +A N+ IEQ K+ S
Sbjct: 1491 RDQLVAALEIQLKALISSNVQKDNEIEQLKKITS 1524
Score = 60 (26.2 bits), Expect = 2.2e-05, Sum P(3) = 2.2e-05
Identities = 20/72 (27%), Positives = 42/72 (58%)
Query: 368 DKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNK---LLH 424
++++K S+ E+ + + + L+KS K KI+ QN+ +++ D++ ED NK L
Sbjct: 698 EELKKRESES-EINLNSLVQELEKSNK-KIIMQNQ-RIQELMDKIDQKEDTINKFQNLKF 754
Query: 425 ALRNS--GAENI 434
+ N+ G++N+
Sbjct: 755 HMENTCKGSDNV 766
Score = 56 (24.8 bits), Expect = 6.3e-05, Sum P(4) = 6.3e-05
Identities = 25/92 (27%), Positives = 47/92 (51%)
Query: 168 EETEKAVGDPQLPVQHC-ALVEKSSK--LKTIECTVKRNGDTLNQLKALNVEQEKDVERV 224
+ETE+A+ ++ A + K+ + +KT E KR ++ L +L E EK +++
Sbjct: 666 DETEEAIACLEIKFNQVKAELAKTKEELIKTREELKKRESESEINLNSLVQELEKSNKKI 725
Query: 225 ---RQRA-ELLEKVESMK---KKLPWLKYDMK 249
QR EL++K++ + K LK+ M+
Sbjct: 726 IMQNQRIQELMDKIDQKEDTINKFQNLKFHME 757
Score = 49 (22.3 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 22/76 (28%), Positives = 41/76 (53%)
Query: 165 KLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERV 224
K EE ++++ D + ++ L E + +LKT T++ N+LK N ++EK E
Sbjct: 828 KKSEEMQESISDEE-NIR--LLQENNEELKTRLLTIE------NELK--NEKEEK-TELN 875
Query: 225 RQRAELLEKVESMKKK 240
+Q L +++ S +KK
Sbjct: 876 KQIVSLQQELSSSEKK 891
Score = 48 (22.0 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 31/107 (28%), Positives = 49/107 (45%)
Query: 157 EFAKLSPVKL--LEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTL------- 207
E K S K +EE E+ + Q V+ ++++LK IE K+N D L
Sbjct: 1032 EIVKTSSKKTHQIEELEQQIEKLQAEVKD--YTNENNRLK-IEEREKKNQDDLLKEKDSL 1088
Query: 208 -NQLK--------ALNVEQEKDVERVRQRAELLEKVESMKKKLPWLK 245
QLK +L++E + VE R +EL++ V K K+ L+
Sbjct: 1089 IQQLKEEVQEKTISLDIEVQHVVEGKRALSELMQDVTCYKVKIKELE 1135
Score = 45 (20.9 bits), Expect = 6.3e-05, Sum P(4) = 6.3e-05
Identities = 12/55 (21%), Positives = 33/55 (60%)
Query: 364 EPPHDKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDK 418
E +IEKL +++ + + N+ ++++ EK+ NQ+ L L++ ++ ++++
Sbjct: 1045 EELEQQIEKLQAEVKDYTNENNRLKIEEREKK---NQDDL-LKEKDSLIQQLKEE 1095
Score = 45 (20.9 bits), Expect = 6.3e-05, Sum P(4) = 6.3e-05
Identities = 19/100 (19%), Positives = 47/100 (47%)
Query: 367 HDKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKL-LHA 425
H +E + + E+ V+ + K+ + E+ L Q + + +KD ++NN+L +
Sbjct: 1020 HSTVEAIWEECKEI-VKTSSKKTHQIEE---LEQQ---IEKLQAEVKDYTNENNRLKIEE 1072
Query: 426 LRNSGAENIF-EAYCWLQQHRHELNKEAYGPVLLEVNVSN 464
+++ E +QQ + E+ ++ + L++ V +
Sbjct: 1073 REKKNQDDLLKEKDSLIQQLKEEVQEKT---ISLDIEVQH 1109
Score = 44 (20.5 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 22/82 (26%), Positives = 39/82 (47%)
Query: 364 EPPHD-KIEKLGSQILELGVQANQKRLQKSEKEKI-----LNQNKLTLRQCSDRLKDMED 417
E PH ++ +L + +L R Q +E E++ +N + LTL +C LK+ E
Sbjct: 367 EIPHVIRVSELS--LCDLAGSERSMRTQ-NEGERLRETGNINTSLLTLGKCISVLKNSE- 422
Query: 418 KNNKLLHA-LRNSGAENIFEAY 438
K+ H R S + F+++
Sbjct: 423 KSKFQQHVPFRESKLTHYFQSF 444
Score = 43 (20.2 bits), Expect = 2.2e-05, Sum P(3) = 2.2e-05
Identities = 15/59 (25%), Positives = 31/59 (52%)
Query: 186 LVEKSSKLKTIE-CTVKRNGDT--LNQLKALNVEQEKDVERVRQRAELLEKVESMKKKL 241
+VE ++ +E K+N +T +++ +E +K + +LL+ +E +KKKL
Sbjct: 531 VVEDEDLVEDLEKAEEKQNVETEFIDEDLHDTLEDDKAFSSHAGKRKLLDLIEDLKKKL 589
Score = 42 (19.8 bits), Expect = 6.3e-05, Sum P(4) = 6.3e-05
Identities = 10/46 (21%), Positives = 23/46 (50%)
Query: 281 IEGKKQEKAILDGDCKKLSSLINENSKRRMDFLEKVDQGVQVQGKY 326
++ +K+EK L+ L ++ + K+ + F ++ Q +Q Y
Sbjct: 864 LKNEKEEKTELNKQIVSLQQELSSSEKKSLGFSIEIQQ---IQSSY 906
>MGI|MGI:2154049 [details] [associations]
symbol:Smc1b "structural maintenance of chromosomes 1B"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000775 "chromosome, centromeric region"
evidence=IDA] [GO:0000795 "synaptonemal complex" evidence=IDA]
[GO:0000800 "lateral element" evidence=IDA] [GO:0003677 "DNA
binding" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007062
"sister chromatid cohesion" evidence=IDA] [GO:0007126 "meiosis"
evidence=IPI] [GO:0030261 "chromosome condensation" evidence=IEA]
[GO:0030893 "meiotic cohesin complex" evidence=ISO;IDA] [GO:0034991
"nuclear meiotic cohesin complex" evidence=IDA] [GO:0051276
"chromosome organization" evidence=IEA] InterPro:IPR024704
InterPro:IPR010935 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 MGI:MGI:2154049 GO:GO:0005524
GO:GO:0007126 GO:GO:0005654 GO:GO:0000775 GO:GO:0003677
GO:GO:0006281 Reactome:REACT_118161 Reactome:REACT_120463
Reactome:REACT_75800 GO:GO:0006310 GO:GO:0030261 GO:GO:0000800
GO:GO:0007062 eggNOG:COG1196 SUPFAM:SSF75553 GO:GO:0034991
HOGENOM:HOG000195481 HOVERGEN:HBG039593 KO:K06636
GeneTree:ENSGT00580000081569 CTD:27127 OMA:QLYHNEK EMBL:AF303827
IPI:IPI00120490 RefSeq:NP_536718.1 UniGene:Mm.182737
ProteinModelPortal:Q920F6 SMR:Q920F6 STRING:Q920F6
PhosphoSite:Q920F6 PaxDb:Q920F6 PRIDE:Q920F6
Ensembl:ENSMUST00000023068 GeneID:140557 KEGG:mmu:140557
InParanoid:Q920F6 OrthoDB:EOG4RNB7M NextBio:369861 Bgee:Q920F6
CleanEx:MM_SMC1B Genevestigator:Q920F6
GermOnline:ENSMUSG00000022432 Uniprot:Q920F6
Length = 1248
Score = 101 (40.6 bits), Expect = 2.4e-05, Sum P(3) = 2.4e-05
Identities = 67/385 (17%), Positives = 166/385 (43%)
Query: 644 QTEQRLIEDEAAK--LQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTA 701
Q +++L + K +QK +E+I N+ + E+ + +E + +++ +++ + N
Sbjct: 827 QLKKKLNNIDTLKTTIQKGKEDIDNLKKTEEECLKIVEE-LMVKQEQIKEVLATQSSN-- 883
Query: 702 LAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMA--SIEFDAKIRELEFNLK 759
+ K+ Q + + E+ L E+V + S +K + ++ D K+++++ +L
Sbjct: 884 IEKIHIQIEEERKKVLAVDREVGKLQKEVVIIQGSLEQKLLEKHNLLLDCKVQDIDISLV 943
Query: 760 QHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIE-ELE 818
+L+ + E + E + + K + I + + + L+ +E L
Sbjct: 944 LG---SLEDIIEMELTETESTQATADIYE-KEASIQIDYSPLREDLKALQSDKEVEAHLT 999
Query: 819 AAIQDNISQANSIFFLNQNILQEYEHRQR---QIEDLSTKQEADKKELKRFLAEIDALKE 875
+Q SQ N++ L+ E+ + + ++ + EA +KE + E + +K
Sbjct: 1000 LLLQQVASQENTLLKTTAPNLRAQENLKTVRDKFQESADVFEASRKEARICRQEFEQVKR 1059
Query: 876 KWLPTLRNLVAQINETFSRNFQEMAVAGEV-SLDEHESDFDKFGILIKVKFRQSGQLEVL 934
+ I+ + + ++++ + E+ + + I G+ +
Sbjct: 1060 RRYDAFSQCFEHISVSIDQIYKKLCRNNSAQAFLSPENPEEPYLDGISYNCVAPGK-RFM 1118
Query: 935 SAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNT 994
+ SGGE+ V+ + L ++ PF V+DE++ +D N K+ ++ SQ
Sbjct: 1119 PMDNLSGGEKCVAALALLFAVHSFRPAPFFVLDEVDAALDNTNIGKV-SSYIKEQSQEQF 1177
Query: 995 PQCFLLTPKLLPDLEYSEACSILNI 1019
Q +++ L + YS+A +++ +
Sbjct: 1178 -QMIIIS---LKEEFYSKADALIGV 1198
Score = 97 (39.2 bits), Expect = 2.4e-05, Sum P(3) = 2.4e-05
Identities = 59/240 (24%), Positives = 102/240 (42%)
Query: 21 GNIIEIELHNFMTF-DHLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATS 79
G++ + + NF ++ + P R +IGPNGSGKS+++ A++ +G T L R +
Sbjct: 2 GHLELLLVENFKSWRGRQVIGPFKRFTCIIGPNGSGKSNVMDALSFVMGEKTTNL-RVKN 60
Query: 80 I-----GAYV-KRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVL 133
I GA+ K S + I D+ EE T R I SE+ F K V + +
Sbjct: 61 IQELIHGAHTGKPVSSSASVTIIYIEDSGEEK-TFTRII-RGGCSEYHFGDKPVSRSVYV 118
Query: 134 EITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKL 193
+ I V + Q V + P + + E+ + ++ A +K K
Sbjct: 119 AQLENIGIIVKAQNCLVFQGTVESISMKKPKERTQFFEEISTSGEFIGEYEAKKKKLQKA 178
Query: 194 KT---IECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKK 250
+ VK+N + K +E+E + E + E L K+ ++ L L Y+ +K
Sbjct: 179 EEDAQFHFNVKKN--VAAERKHAKIEKE-EAEHYQNLLEEL-KINKIQLMLFQLYYNEEK 234
Score = 43 (20.2 bits), Expect = 2.4e-05, Sum P(3) = 2.4e-05
Identities = 16/70 (22%), Positives = 34/70 (48%)
Query: 363 YEPPHDKIEKLGSQILELG-VQANQKRLQKS--EKEKILNQNKLTLRQCSDRLKDMEDKN 419
+E +K E+L + G Q N K++++ E +K + + + + C D L+D + +
Sbjct: 398 WEQKAEK-ERLAFEKRRHGDTQGNLKQIKEQIEEHKKRIEKLEEYTKTCMDCLEDKKQQE 456
Query: 420 NKLLHALRNS 429
L + N+
Sbjct: 457 EALKKEIENT 466
Score = 41 (19.5 bits), Expect = 3.7e-05, Sum P(3) = 3.7e-05
Identities = 9/43 (20%), Positives = 24/43 (55%)
Query: 391 KSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAEN 433
K ++E+ L K + R+ ++ ++ + + + L+N+G +N
Sbjct: 452 KKQQEEAL---KKEIENTKSRMSEVNEELSLIRNELQNAGIDN 491
>ZFIN|ZDB-GENE-060503-506 [details] [associations]
symbol:si:ch211-250g4.3 "si:ch211-250g4.3"
species:7955 "Danio rerio" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
ZFIN:ZDB-GENE-060503-506 InterPro:IPR011029 SUPFAM:SSF47986
OrthoDB:EOG41JZBB GeneTree:ENSGT00700000104373 eggNOG:NOG255112
EMBL:CR385063 IPI:IPI01005290 UniGene:Dr.156482
Ensembl:ENSDART00000139999 OMA:LERTITH Uniprot:Q1L949
Length = 1041
Score = 132 (51.5 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 63/269 (23%), Positives = 125/269 (46%)
Query: 647 QRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLR-KRKLESIEKEDDINTALAKL 705
QR+ + E AK+ KE+EE I I + E R+ RE +N K + E + + + + +
Sbjct: 542 QRVNDVEKAKILKEKEESIRIRE-EARQERETTELVNAEIKAEKERLNQRQE---EMLRE 597
Query: 706 VDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLA 765
+ + + + EI+N ++ ++ EK A I+ +I ++E +++ +K
Sbjct: 598 RQEIERIKHETLRAKEEIENSQ-DVTIREYEKMEKMKAEIQ--GQIEDIEKKVEEIQKTK 654
Query: 766 LQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEK-EFL--EMPTTIEELEAAIQ 822
Q E+ K E+E R+ L + KR ++ E+E+ EFL E+ EE+E+ +
Sbjct: 655 EQM----EEAKVELEEEREDL-ERKRD-----LVSREIEQAEFLRNEILRVKEEMESRWR 704
Query: 823 DNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLR 882
+ ++ + Q+ L+ E + + E E K EL + +D LK +
Sbjct: 705 ETETEEVELRAKTQHELERLEKLREETERSQKNIEESKIELMLWKESLDKLKGEMEEDKH 764
Query: 883 NLVAQINETFSRNFQEMAVAGEVSLDEHE 911
++ Q+NE ++ Q V ++ ++ E
Sbjct: 765 VVIMQMNEAKAKEEQLTMVIEQLEIERGE 793
Score = 59 (25.8 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 38/146 (26%), Positives = 66/146 (45%)
Query: 102 KEEHLTIMRKIDTRNKSEWFFNGKVVPKG-EVLEITKRFNIQVNNLTQFLPQDRVC-EFA 159
KE+ L M+ R + E NG++V K E +E K +IQ + ++ D + E
Sbjct: 421 KEKDLEEMKHEIERGREELVMNGELVKKEWEKIEQAK-VDIQSHMISMEGRVDEIKRETE 479
Query: 160 KLSPVKLLEETEKAVGDPQLPVQHCALVEKSSK---LKTIE----CTVKRNGDTLNQLKA 212
+L +K + +K + Q A E K + T E ++R D L ++A
Sbjct: 480 RLKHIKTEMQRDKDALEKQKDDTRKAKEEAERKRYEIVTEELEHRARLQRERDELENIRA 539
Query: 213 LNVEQEKDVERVRQRAELLEKVESMK 238
+++ DVE+ + L EK ES++
Sbjct: 540 -EMQRVNDVEKAKI---LKEKEESIR 561
Score = 49 (22.3 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 38/237 (16%), Positives = 91/237 (38%)
Query: 187 VEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLK- 245
+E+ KL E T + + N + + +Q++ ++ +L + MK ++ ++
Sbjct: 145 IEQIEKLW--EGTKQERTEIDNMKQKIQRQQDEITRMTTEKGQLERTITHMKAEIDHIRE 202
Query: 246 -YDMKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINE 304
D K E ++L + I ++Q ++ + + +
Sbjct: 203 RMDRNKEEVNRERERVEQMRSDLQAEQSSLQQKRDEIMTERQNLEMIRYETLRQQEELES 262
Query: 305 N---SKRRMDFLEKVDQGVQVQGKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVP 361
N +K M+ +E++ +QVQ +KA +
Sbjct: 263 NRESTKHEMERMEQMKSAIQVQINEIEMKIGETQKAKDLMEQMKAEIEDEKNELEKKKED 322
Query: 362 AYEPPHDKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDK 418
+ D+ E++ + ++ ++ Q R ++EKE L Q + R+ ++LK ++D+
Sbjct: 323 I-KRQRDQFEQIKLDLQQVKMEMEQ-RWHETEKEG-LEQRAVIQRE-KEQLKYLQDE 375
>SGD|S000004076 [details] [associations]
symbol:SMC4 "Subunit of the condensin complex" species:4932
"Saccharomyces cerevisiae" [GO:0007076 "mitotic chromosome
condensation" evidence=IMP;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IGI;IDA]
[GO:0000070 "mitotic sister chromatid segregation" evidence=TAS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0051276 "chromosome
organization" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;IDA]
[GO:0005694 "chromosome" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0030261 "chromosome condensation" evidence=IEA]
[GO:0000799 "nuclear condensin complex" evidence=TAS;IPI]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA] [GO:0070058
"tRNA gene clustering" evidence=IMP] [GO:0032116 "SMC loading
complex" evidence=IDA] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
SGD:S000004076 Pfam:PF02463 GO:GO:0005524 GO:GO:0005737
GO:GO:0051301 GO:GO:0006281 GO:GO:0003682 EMBL:BK006945
GO:GO:0016887 GO:GO:0006310 GO:GO:0007076 EMBL:U53880 GO:GO:0000799
GO:GO:0070058 EMBL:Z73259 GO:GO:0007062 eggNOG:COG1196
GeneTree:ENSGT00580000081617 KO:K06675 SUPFAM:SSF75553 OMA:IAIEFLT
HOGENOM:HOG000184777 OrthoDB:EOG4WM82V EMBL:Z73258 PIR:S64918
RefSeq:NP_013187.1 ProteinModelPortal:Q12267 SMR:Q12267
DIP:DIP-3007N IntAct:Q12267 MINT:MINT-436885 STRING:Q12267
PaxDb:Q12267 EnsemblFungi:YLR086W GeneID:850775 KEGG:sce:YLR086W
CYGD:YLR086w NextBio:966951 Genevestigator:Q12267
GermOnline:YLR086W Uniprot:Q12267
Length = 1418
Score = 106 (42.4 bits), Expect = 2.7e-05, Sum P(3) = 2.7e-05
Identities = 77/361 (21%), Positives = 153/361 (42%)
Query: 647 QRLIEDEAAKLQKEREEIINIV-QIEKRKRREMENHINLRKRKLESIEKEDDINTALAKL 705
Q+L+++ ++ +E+ I Q++ K EN N+ E++ + ++ +L
Sbjct: 1013 QKLLQNSERDVELSSDELKVIEEQLKHTKLALAENDTNMN----ETLNLKVELKEQSEQL 1068
Query: 706 VDQAADL--NIQQFK-YAIEIKNLLVEIVSCKWSYAEKHMASIEF---DAKIRELEFNL- 758
+Q D+ +I +FK IE+KN L ++ S +Y + + E + IR++ L
Sbjct: 1069 KEQMEDMEESINEFKSIEIEMKNKLEKLNSLL-TYIKSEITQQEKGLNELSIRDVTHTLG 1127
Query: 759 ----------KQHEKLALQASLHYEDCK-------KEVE-HCRK-HLSDAKRQAESIAFI 799
K+ K + Y C+ K+ E C H + ++ ++
Sbjct: 1128 MLDDNKMDSVKEDVKNNQELDQEYRSCETQDESEIKDAETSCDNYHPMNIDETSDEVSRG 1187
Query: 800 TPEL-EKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIE--DLSTKQ 856
P L E E E+ +E +E+ I + +S ++ +L+EY R + + L
Sbjct: 1188 IPRLSEDELRELD--VELIESKINE-LSYYVEETNVDIGVLEEYARRLAEFKRRKLDLNN 1244
Query: 857 EADKK-ELKRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFD 915
K+ E+K ++ LK+K I+ T +Q + + G L+ +S D
Sbjct: 1245 AVQKRDEVKE---QLGILKKKRFDEFMAGFNIISMTLKEMYQMITMGGNAELELVDS-LD 1300
Query: 916 KF--GILIKVKFRQSGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGM 973
F G+ V + + + SGGE+++S++ + +L P V+DEI+ +
Sbjct: 1301 PFSEGVTFSVMPPKKSWRNITNL---SGGEKTLSSLALVFALHKYKPTPLYVMDEIDAAL 1357
Query: 974 D 974
D
Sbjct: 1358 D 1358
Score = 89 (36.4 bits), Expect = 2.7e-05, Sum P(3) = 2.7e-05
Identities = 63/297 (21%), Positives = 117/297 (39%)
Query: 23 IIEIELHNFMTF-DHLICKP-GSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI 80
I E+ L NF ++ + P + + V+GPNGSGKS+++ ++ G + R +
Sbjct: 156 INELVLENFKSYAGKQVVGPFHTSFSAVVGPNGSGKSNVIDSMLFVFGFRANKM-RQDRL 214
Query: 81 GAYVKRGE-----ESGYIKISL-----------RGDTKEEHLTIMRKIDTRNKSEWFFNG 124
+ + E +S + + R D ++ L I RK N S+++ N
Sbjct: 215 SDLIHKSEAFPSLQSCSVAVHFQYVIDESSGTSRIDEEKPGLIITRKAFKNNSSKYYINE 274
Query: 125 KVVPKGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHC 184
K EV ++ K I +++ + Q V A++ P + EK D L
Sbjct: 275 KESSYTEVTKLLKNEGIDLDHKRFLILQGEVENIAQMKP-----KAEKESDDGLLEYLE- 328
Query: 185 ALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWL 244
++ ++ IE +R G N L + +E+E E V + LE + L +L
Sbjct: 329 DIIGTANYKPLIE---ERMGQIEN-LNEVCLEKENRFEIVDREKNSLES--GKETALEFL 382
Query: 245 KYDMKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSL 301
+ + K+ + +TL + S + + EK KK+ +
Sbjct: 383 EKE-KQLTLLRSKLFQFKLLQSNSKLASTLEKISSSNKDLEDEKMKFQESLKKVDEI 438
Score = 80 (33.2 bits), Expect = 0.00021, Sum P(3) = 0.00021
Identities = 31/116 (26%), Positives = 57/116 (49%)
Query: 142 QVNNLTQFLPQDR-VCEFAKLSPVKLLEETEKAV--GDPQLPVQHCALVEKSSKLKTIEC 198
++ +LTQ L ++R + + KLS + + + +L L EK S+++ E
Sbjct: 518 EIKDLTQLLEKERSILDDIKLSLKDKTKNISAEIIRHEKELEPWDLQLQEKESQIQLAES 577
Query: 199 TVKRNGDTLNQLKALNVE--QEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAE 252
+ +T +LK NVE +EK + + + EL + + +KKKL LK + + E
Sbjct: 578 ELSLLEETQAKLKK-NVETLEEKILAKKTHKQELQDLILDLKKKLNSLKDERSQGE 632
Score = 47 (21.6 bits), Expect = 2.7e-05, Sum P(3) = 2.7e-05
Identities = 14/49 (28%), Positives = 24/49 (48%)
Query: 389 LQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKL--LHALRNSGAENIF 435
L+ E +K+LN ++ + L ++K+ L L L+ SG N F
Sbjct: 640 LKLKEMQKVLNAHRQRAMEARSSLSKAQNKSKVLTALSRLQKSGRINGF 688
Score = 46 (21.3 bits), Expect = 3.4e-05, Sum P(3) = 3.4e-05
Identities = 14/51 (27%), Positives = 26/51 (50%)
Query: 372 KLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKL 422
KLG+ + + + K E+E L++ + R SD + +ME++ KL
Sbjct: 834 KLGTNQSDKVDDYTPEEVDKIERE--LSERENNFRVASDTVHEMEEELKKL 882
>UNIPROTKB|F1NI68 [details] [associations]
symbol:GOLGA4 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000042 "protein targeting to Golgi"
evidence=IEA] InterPro:IPR000237 Pfam:PF01465 PROSITE:PS50913
SMART:SM00755 GeneTree:ENSGT00700000104373 GO:GO:0000042
Gene3D:1.10.220.60 SUPFAM:SSF101283 EMBL:AADN02001385
EMBL:AADN02001386 IPI:IPI00818295 Ensembl:ENSGALT00000020019
ArrayExpress:F1NI68 Uniprot:F1NI68
Length = 2142
Score = 132 (51.5 bits), Expect = 0.00062, Sum P(3) = 0.00062
Identities = 66/318 (20%), Positives = 152/318 (47%)
Query: 658 QKEREEIINIVQIEKRKR-REMENHINLRKRKLESIEKEDD-INTALAKLVDQAADLNIQ 715
+K EE+ +++ EK++ +E+ + + K +LE+++++ + + T +++ Q + I+
Sbjct: 531 KKRSEELSTLMESEKKQHNKEVSDIVEKHKEELENVKQQQEKLWTEKLQILQQQHVIEIE 590
Query: 716 QF--KYAIEIKNLLVEIVSCKWSYAEK-HMASIE-FDAKIRELE-FNLKQHEKLALQASL 770
+ K EI +L E + ++ E+ + ++E D K ELE + + E L ++ L
Sbjct: 591 KMREKQEQEIDTILKEKETVFRTHIEEMNEKTLEKLDVKQTELETLSSELSEALKVRQDL 650
Query: 771 HYE--DCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQA 828
E + K +V ++ + K +AE E+E E +I+++E +++ ++Q
Sbjct: 651 EQELSELKSKVGEAKQEF-EGKLEAERNQH-KEEVEIMLKEHEISIQDVEKVLKEELNQT 708
Query: 829 NSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLVAQI 888
+ +L+E + R++++++ + + EA+ ++ L E ++ T Q
Sbjct: 709 KQSLEEKERLLEEAKTREQELKESAQRSEAELVQVSARLMEASLSQQN---TSNEQAKQY 765
Query: 889 NETFSRNFQE-MAVAGE-VSLDEH----ESDFDKFGILIKVKFRQSGQL-EVLSAHHQSG 941
E ++ Q+ M + GE + L E ES ++ +++ Q +L + L
Sbjct: 766 EEELAKLQQKLMDLKGEKLQLSEQLVRTESQLNEVKNELELYISQVHELKQQLQEQSDEN 825
Query: 942 GERSVS-TILYLVSLQDL 958
++ +S T Y L+DL
Sbjct: 826 TQKVMSLTQQYESQLKDL 843
Score = 129 (50.5 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 74/311 (23%), Positives = 149/311 (47%)
Query: 649 LIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQ 708
++E++ +++K+ E+ ++I+ + E+E HI + + +S+++E + +
Sbjct: 1428 VLEEKENRIEKQESELTAELKIQAARVAELEEHIAQKTSENDSLKEELKRYHEQKDMEQK 1487
Query: 709 AADLNIQQF-KYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFN-LKQHEKLAL 766
+QQ K A E + L E K E + S++ + + +E EF+ +K +
Sbjct: 1488 EVARQLQQAEKVAFEKDSRLKEAEE-KVLNLENEIGSLKAECEAKEREFDQMKSAILKSK 1546
Query: 767 QASLHYEDCKKEVEHCRKHLSDAKRQAES-IAFITPELEKEFLEMPTTIEELEAAIQDNI 825
+ L + + E+ K L+D K++AE I I EL ++ +EE E ++ +
Sbjct: 1547 EEELKELEERLNAENSCK-LADLKKKAEQKIGSIKRELVRQ-------MEEKEQQLKQD- 1597
Query: 826 SQANSIFFLNQNILQEYEHRQRQIEDLSTKQEA--DKKELKR-FLAEIDALK---EKWLP 879
+ N + L Q + QE R+ +IE L K ++ D EL+R L +I++ K E+
Sbjct: 1598 -RENQVRHLEQKV-QE---REAKIESLEEKMKSVRDSTELEREMLQKIESTKAAVEQEKN 1652
Query: 880 TLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGI--LIKVKFRQSGQLEVLS-A 936
+ V Q +E Q+ + L ++ES+ + GI L++++ +Q L+ L A
Sbjct: 1653 EVIKSVQQTHEEKINKLQKDLIEKNKLLQKYESE-QREGIDSLLELQSKQEELLKKLECA 1711
Query: 937 HHQSGGERSVS 947
+ E+SV+
Sbjct: 1712 EKRHREEQSVT 1722
Score = 120 (47.3 bits), Expect = 0.00083, Sum P(3) = 0.00083
Identities = 64/278 (23%), Positives = 128/278 (46%)
Query: 643 MQTEQRLIEDEAAKLQKEREEIINIVQ-IEKRKRREMENHINLRKR------KLESIEKE 695
+++ Q+ E++ KLQK+ E ++Q E +R +++ + L+ + KLE EK
Sbjct: 1655 IKSVQQTHEEKINKLQKDLIEKNKLLQKYESEQREGIDSLLELQSKQEELLKKLECAEKR 1714
Query: 696 DDINTALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELE 755
++ + + + +L Q KY++ + + + EK S + K++ELE
Sbjct: 1715 HREEQSVTEGLRE--ELEEQAKKYSLLVDEHARCVGDFQKKMQEKDAVSHSLEQKVKELE 1772
Query: 756 FNL-KQHE--KLALQ-ASLHYED----CKKEVEHCRKHLSDAKRQAESIAFITPELEKEF 807
NL K +E K L+ SL YE+ ++++E L + AE A EL+K
Sbjct: 1773 DNLAKVNEVHKTELEDRSLKYEENLKSLQQQLEERNDRLKAFEENAEEKAKSGLELQKLL 1832
Query: 808 LEMPTTIEELEAAIQDNISQANSIFF-LN--QNILQEYEHRQRQIEDLSTKQEADKKELK 864
+M ++L+A +++ + + +N Q L+ +Q D+ K+ ++ E K
Sbjct: 1833 GDMQNQQKDLQAKLEEAEREKQKLRKDVNSLQKDLRTLRKEHQQELDIVKKESLEEMEQK 1892
Query: 865 RFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEMAVA 902
E + ++ K TL+ L+ + N ++ E+ A
Sbjct: 1893 -IRCEQEDIELKHSSTLKQLMREFNTQLAQKEMELETA 1929
Score = 68 (29.0 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 23/103 (22%), Positives = 49/103 (47%)
Query: 142 QVNNLTQFLPQDRVCEFAKLS--PVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECT 199
++++ + L Q++ ++ KL E KA + H A+ + SKL+
Sbjct: 1343 ELSSSVELLRQEKASALEQVDHCTAKLSEWKTKA--QTRFTQNHEAIKDLQSKLEVSNTQ 1400
Query: 200 VKRNGDTLNQLKALNVEQEKDVERVRQRAELLE-KVESMKKKL 241
+ G+ L++LK +Q KD++ ++ E E ++E + +L
Sbjct: 1401 ATKKGEELDKLKEELAQQGKDLDSLKSVLEEKENRIEKQESEL 1443
Score = 65 (27.9 bits), Expect = 6.1e-05, Sum P(2) = 6.1e-05
Identities = 73/378 (19%), Positives = 142/378 (37%)
Query: 95 ISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVP-----KGEVLEITKRFNIQVNNLTQF 149
+ +R D ++E + K+ K E F GK+ K EV + K I + ++ +
Sbjct: 644 LKVRQDLEQELSELKSKVGEA-KQE--FEGKLEAERNQHKEEVEIMLKEHEISIQDVEKV 700
Query: 150 LPQDRVCEFAKLSPV-KLLEETEKAVGDPQLPVQH--CALVEKSSKLKTIECTVKRNGDT 206
L ++ L +LLEE + + + Q LV+ S++L +E ++ + +
Sbjct: 701 LKEELNQTKQSLEEKERLLEEAKTREQELKESAQRSEAELVQVSARL--MEASLSQQNTS 758
Query: 207 LNQLKALNVE----QEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAEYIXXXXXXXX 262
Q K E Q+K ++ ++ +L E++ + +L +K +++ YI
Sbjct: 759 NEQAKQYEEELAKLQQKLMDLKGEKLQLSEQLVRTESQLNEVKNELEL--YISQVHELKQ 816
Query: 263 XXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENSKRRMDFLEKVDQGVQV 322
NT S + + Q K + + + K + E + ++ ++KV
Sbjct: 817 QLQEQSDE-NTQKVMSLTQQYESQLKDLQE-EADKAKQTLTER-ENDIEHVKKVQNEEME 873
Query: 323 QGKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPAYEPPHDKIEKLGSQILELGV 382
+ K K K + Q + K KL Q +L
Sbjct: 874 ELKQKLLATEERISTLQGDYENKLKRQENKMEKMKQKSKEMQETFKK--KLAEQESKLKK 931
Query: 383 QANQKRLQKSEKEKILNQNKLTLRQCS-----DRLKDMEDKNNKLLHALRNSGAENIFE- 436
+ K+L+ S+KE N L + S D + +E + L +L + + E
Sbjct: 932 ELENKQLEFSQKESEFNAKMLEMAHASSAGINDAVSKLESNQKEQLESLAEAHKRELEEI 991
Query: 437 AYCW---LQQHRHELNKE 451
+ W L Q EL ++
Sbjct: 992 SRSWEKKLNQQAEELQEK 1009
Score = 61 (26.5 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 28/112 (25%), Positives = 52/112 (46%)
Query: 131 EVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETE-----KAVGDPQ--LPVQH 183
+V E++ + L Q C AKLS K +T +A+ D Q L V +
Sbjct: 1340 QVQELSSSVELLRQEKASALEQVDHCT-AKLSEWKTKAQTRFTQNHEAIKDLQSKLEVSN 1398
Query: 184 CALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVE 235
+K +L ++ + + G L+ LK++ E+E +E+ Q +EL +++
Sbjct: 1399 TQATKKGEELDKLKEELAQQGKDLDSLKSVLEEKENRIEK--QESELTAELK 1448
Score = 60 (26.2 bits), Expect = 0.00010, Sum P(3) = 0.00010
Identities = 30/113 (26%), Positives = 52/113 (46%)
Query: 130 GEVLEITKRFNIQVNNLTQFLPQDR--VCEFAKLSPVKLLEETEKAVGDPQLPVQHCALV 187
GE ++ + NL + L QD+ V K + LE E+ V QL + +
Sbjct: 286 GEKTKLITQLR-DAKNLIEQLEQDKGMVIAETKRQMHETLEMKEEEVA--QLRARIKQIT 342
Query: 188 EKSSKLKTIECTVKRNGDTLNQL-KALNVEQEKDVERVRQRAELLEKVESMKK 239
+ +LK E K +L KAL + Q + R + +AE+ EK+++++K
Sbjct: 343 TQGEELK--EQKEKFERAAFEELEKALGMAQRTEEARKKLQAEMDEKIKAVEK 393
Score = 56 (24.8 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 56/333 (16%), Positives = 132/333 (39%)
Query: 131 EVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKS 190
+V+ +T+++ Q+ +L + + + + + ++ +++ + + +L + A E+
Sbjct: 828 KVMSLTQQYESQLKDLQEEADKAKQTLTERENDIEHVKKVQNEEME-ELKQKLLATEERI 886
Query: 191 SKLK-TIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLP--WLKYD 247
S L+ E +KR + + ++K ++ K+++ ++ +L E+ +KK+L L++
Sbjct: 887 STLQGDYENKLKRQENKMEKMK----QKSKEMQETFKK-KLAEQESKLKKELENKQLEFS 941
Query: 248 MKKAEY------IXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDC-KKLSS 300
K++E+ + N + E K+E + KKL+
Sbjct: 942 QKESEFNAKMLEMAHASSAGINDAVSKLESNQKEQLESLAEAHKRELEEISRSWEKKLNQ 1001
Query: 301 LINE-NSKRRMDFLEKVDQGVQVQGKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQ- 358
E K M+ EK + ++ K + + + Q
Sbjct: 1002 QAEELQEKHEMELQEKEQELGDLKEKLATFSAEKEGSRTEITRLKEEQVKRNETLKQLQE 1061
Query: 359 ----TVPAYEPPHDKIEKLGSQILELGVQANQKRLQKSE-KEKILNQ------NKLTLRQ 407
++ + L +Q+ +L +Q +KS +E+I Q +K + +
Sbjct: 1062 ELKQSLAQMSALSNSESGLKAQLQKLEGDLSQSLKEKSGLQEQISRQKAIEEKDKARITE 1121
Query: 408 CSDRLKDMEDKNNKLL--HALRNSGAENIFEAY 438
+D+LK +E+K L H+ E EA+
Sbjct: 1122 LADKLKTLEEKLQTLQSSHSKDRENYEKKIEAF 1154
Score = 52 (23.4 bits), Expect = 0.00010, Sum P(3) = 0.00010
Identities = 19/91 (20%), Positives = 45/91 (49%)
Query: 364 EPPHDKIEKLGSQILELG---VQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNN 420
E H ++E ++ILEL + +Q ++SE+ L +++ +Q + + D+ +K+
Sbjct: 503 EEMHQEVETFKTRILELESSLAKCSQDDKKRSEELSTLMESEK--KQHNKEVSDIVEKHK 560
Query: 421 KLLHALRNSGAENIFEAYCWLQQHRHELNKE 451
+ L ++ E ++ + Q +H + E
Sbjct: 561 EELENVKQQ-QEKLWTEKLQILQQQHVIEIE 590
Score = 41 (19.5 bits), Expect = 0.00062, Sum P(3) = 0.00062
Identities = 15/50 (30%), Positives = 24/50 (48%)
Query: 370 IEKLGSQILE-LGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDK 418
+EK S+ L+ L Q Q+ L E E Q K +C +L++M +
Sbjct: 462 LEKNQSECLKTLQEQEQQESLALEELEL---QKKAIQSECDKKLEEMHQE 508
>UNIPROTKB|F1SCX7 [details] [associations]
symbol:KIF20B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050699 "WW domain binding" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0007018
"microtubule-based movement" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=IEA] [GO:0003777 "microtubule motor
activity" evidence=IEA] InterPro:IPR001752 InterPro:IPR019821
Pfam:PF00225 PRINTS:PR00380 PROSITE:PS00411 PROSITE:PS50067
SMART:SM00129 GO:GO:0005524 GO:GO:0005813 GO:GO:0005875
GO:GO:0005654 GO:GO:0005730 GO:GO:0016887 GO:GO:0005874
GO:GO:0003777 GO:GO:0007018 Gene3D:3.40.850.10
GeneTree:ENSGT00530000063172 OMA:KLGIKHQ EMBL:AEMK01189758
EMBL:CT955956 EMBL:CU407054 Ensembl:ENSSSCT00000011443
Uniprot:F1SCX7
Length = 1828
Score = 130 (50.8 bits), Expect = 3.2e-05, Sum P(3) = 3.2e-05
Identities = 67/318 (21%), Positives = 140/318 (44%)
Query: 654 AAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAADL- 712
+A+L++E E +I+ ++R +E + NL+ +SI+ D++ +L ++ L
Sbjct: 1187 SAQLEQEILEKESIILKQERNLKEFQ--ANLQ----DSIKNAKDLSEREVRLKEEVTRLT 1240
Query: 713 -NIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRE-LEFNLKQHEKLALQASL 770
N+Q K+++++K E W EK ++ + + + L+ +L++ E+ +
Sbjct: 1241 NNLQDAKHSLQVKE---EERETNWQEIEKLKEALSVSSALTQNLKVDLQRKEEDYAEVKE 1297
Query: 771 HYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANS 830
D K+++E +K +S + + + +LEK+ + I+ + IQ Q N
Sbjct: 1298 KLADAKRQIEQVQKEVSVMRDDEKLLRVKINDLEKKKNQCSEEIDMKQRTIQQLKEQLN- 1356
Query: 831 IFFLNQNILQEYEHRQRQIEDLSTKQEA--DKK----ELKRFLAEIDALKEKWLPTLRNL 884
NQ + + + +R +DLS K++ D + E ++ E D + E L L
Sbjct: 1357 ----NQKVEEAIQQYERVCKDLSVKEKIIEDMRMTLEEQEQTQVEQDQVLEAKLEEAERL 1412
Query: 885 VAQINETFSRNFQEMAV-AGEVSLDEHESDFDKFGI-LIKVKFRQSGQLEVLSAHHQSGG 942
++ E + +++ + E S E E + D I L K++ + A +
Sbjct: 1413 ATEL-EKWKEKCKDLETKSNERSNKELEDNTDILNIKLSKLQDELQESEQKYKADRKKWL 1471
Query: 943 ERSVSTILYLVSLQDLTN 960
E + I +DL N
Sbjct: 1472 EEKMMLITQAKEAEDLRN 1489
Score = 61 (26.5 bits), Expect = 3.2e-05, Sum P(3) = 3.2e-05
Identities = 51/243 (20%), Positives = 94/243 (38%)
Query: 93 IKISLRGDTKEEHLTIMRKIDTR-NKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQFLP 151
+K L TKEE + ++ R N+S+ N V E+ + K+ +Q + + +
Sbjct: 720 VKAEL-AKTKEELIETQEELKKRENESKTNVNSLVQ---ELDKSNKKIIMQNQRIQELMD 775
Query: 152 QDRVCE--FAKLSPVKL-LEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLN 208
+ E K +K +E T K G + + +T+E + R T +
Sbjct: 776 KTDQKEDTINKFQNLKFHMENTFK--GSDNSDTSSLIINDNLVGNETVEMSEDRKTKTFS 833
Query: 209 QLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAEYIXXXXXXXXXXXXXX 268
K LN ++E Q+ E K E P + D +K+E +
Sbjct: 834 GRKRLN-----EIEL--QQDEPPAKKEGPTHVSPAITGDQRKSEEMQESISEDEENIRVL 886
Query: 269 XXXNTLHE----FSKPIEGKKQEKAILDGDCKKLSSLINENSKRRMDFLEKVDQGVQVQG 324
N L ++ +K+EKA L+ L ++ + K+ ++F +V Q +Q
Sbjct: 887 QENNELKTRILIVENELKNEKEEKAELNKQIVSLQQELSSSEKKSLNFSIEVQQ---IQS 943
Query: 325 KYK 327
Y+
Sbjct: 944 NYE 946
Score = 53 (23.7 bits), Expect = 3.2e-05, Sum P(3) = 3.2e-05
Identities = 20/75 (26%), Positives = 36/75 (48%)
Query: 392 SEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALR-NSGAENIF-EAYCWLQQHRHELN 449
S+K + + K + + +K +D+NN+L R N E + E +QQ + EL
Sbjct: 1077 SKKSHQIEELKEQIEKLQAEVKHYKDENNRLKTEERENKNQEGLLKEKESLIQQLKEELQ 1136
Query: 450 KEAYGPVLLEVNVSN 464
++ V L+V V +
Sbjct: 1137 EKT---VNLDVQVQH 1148
Score = 48 (22.0 bits), Expect = 0.00060, Sum P(3) = 0.00060
Identities = 23/82 (28%), Positives = 35/82 (42%)
Query: 160 KLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEK 219
K S + E D L V+ E+ ++T E T + TL + KA +EK
Sbjct: 516 KRSTISWESSLEDVAEDEDL-VEDLEKAEEKQNVET-EFTDEELDKTLEEDKAFISREEK 573
Query: 220 DVERVRQRAELLEKVESMKKKL 241
+LL+ +E +KKKL
Sbjct: 574 --------RKLLDLIEDLKKKL 587
>MGI|MGI:109153 [details] [associations]
symbol:Ktn1 "kinectin 1" species:10090 "Mus musculus"
[GO:0005783 "endoplasmic reticulum" evidence=IDA] [GO:0007018
"microtubule-based movement" evidence=TAS] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0019894 "kinesin binding" evidence=TAS] InterPro:IPR024854
MGI:MGI:109153 GO:GO:0005783 GO:GO:0016021 GO:GO:0005789
GO:GO:0007018 GO:GO:0019894 CTD:3895 eggNOG:NOG149793
HOVERGEN:HBG007851 OrthoDB:EOG4Z62N5 PANTHER:PTHR18864 EMBL:L43326
EMBL:AK040200 EMBL:AJ517365 EMBL:AJ517366 EMBL:AJ517367
EMBL:AJ517368 EMBL:AJ517369 EMBL:AJ517370 EMBL:AJ517371
EMBL:AJ517372 EMBL:AJ517373 EMBL:AJ517374 EMBL:AJ517375
EMBL:AJ517376 EMBL:AJ517377 EMBL:AJ517378 EMBL:AJ517379
EMBL:AJ517380 EMBL:AJ517381 EMBL:AJ517382 EMBL:AJ517383
EMBL:AJ517384 IPI:IPI00122559 IPI:IPI00407517 IPI:IPI00473546
IPI:IPI00759851 IPI:IPI00759887 IPI:IPI00759913 IPI:IPI00759916
IPI:IPI00759936 IPI:IPI00759943 IPI:IPI00759952 IPI:IPI00759972
IPI:IPI00760003 IPI:IPI00760049 IPI:IPI00760053 IPI:IPI00760076
IPI:IPI00760078 RefSeq:NP_032503.2 UniGene:Mm.3110
ProteinModelPortal:Q61595 IntAct:Q61595 STRING:Q61595
PhosphoSite:Q61595 PaxDb:Q61595 PRIDE:Q61595 GeneID:16709
KEGG:mmu:16709 UCSC:uc007til.1 UCSC:uc007tim.1 InParanoid:Q61595
NextBio:290490 CleanEx:MM_KTN1 Genevestigator:Q61595
GermOnline:ENSMUSG00000021843 Uniprot:Q61595
Length = 1327
Score = 116 (45.9 bits), Expect = 3.2e-05, Sum P(3) = 3.2e-05
Identities = 69/326 (21%), Positives = 133/326 (40%)
Query: 658 QKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKED-DINTALAKLVDQAADLNIQQ 716
+K E + + EK + + R++ +E+IE E D+ L V ++LN +
Sbjct: 1010 EKNWEAMEALASTEKMLQDRVNKTSKERRQHVEAIELESKDLLKRLFPTVSVPSNLNYSE 1069
Query: 717 FKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYEDCK 776
+ E K +C ++ + + +++E + H L L+ Y+
Sbjct: 1070 WLRGFEKK-----AKACVAGTSDAEAVKV-LEHRLKEAS---EMHTLLQLECE-KYKSVL 1119
Query: 777 KEVEHCRKHLSDAKRQAESIAFI-TPELEKEFLEMPTTIEELEAAIQDNISQANSIFFLN 835
E E + L + Q ES I E ++ +M ++ E ++ + Q N
Sbjct: 1120 AETEGILQKLQRSVEQEESKWKIKADESQRMIKQMQSSFTASERELE-RLRQENKDM--- 1175
Query: 836 QNILQEYEHRQRQIEDLSTKQEA---DKKELKRFLAEIDA-LKEKWLPTLR-----NLV- 885
+N+ +E EH + ++E ++ + +ELK L E+ L + + +R NL+
Sbjct: 1176 ENLRREREHLEMELEKAEMERSTYVMEVRELKDLLTELQKKLDDSYSEAVRQNEELNLLK 1235
Query: 886 AQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVLSAHHQSGGERS 945
Q+NET S+ E +V+ D H++ I K+ + +G V+ S S
Sbjct: 1236 TQLNETHSKLQNEQTERKKVADDLHKAQQSLNSIHSKISLKAAGDTVVIENSDISPEMES 1295
Query: 946 VSTILYLVSLQDLTNCPFRVVDEINQ 971
VSL +++ E+NQ
Sbjct: 1296 PEKETMSVSLNQTVTQLQQLLQEVNQ 1321
Score = 63 (27.2 bits), Expect = 3.2e-05, Sum P(3) = 3.2e-05
Identities = 16/58 (27%), Positives = 27/58 (46%)
Query: 390 QKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAENIFEAYCWLQQHRHE 447
Q E E +L + +++ +LKD E +K+ L+ EN F C L +H+
Sbjct: 907 QFEELESVLKEKDNEIKRIEVKLKDTESDVSKMSELLKEVQEENKF-LKCQLSHQKHQ 963
Score = 61 (26.5 bits), Expect = 3.2e-05, Sum P(3) = 3.2e-05
Identities = 38/138 (27%), Positives = 67/138 (48%)
Query: 101 TKEEHLTIMRKIDTRNKSE---W--FFNGKVVPKGEVLEITKRFNIQVNNLTQFLPQDRV 155
+KEE L ++ ++ K+E W N + EV ++ K +++ + + + L +
Sbjct: 635 SKEEELKDVQNMNFLLKAEVQKWQALANEQAATAHEVEKMQKSIHVKEDEI-RLLEEQLQ 693
Query: 156 CEFA-KLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALN 214
E A K+ +K+L E KA+ Q V+ KL+T + + N D + Q++
Sbjct: 694 HEVASKMEELKILSEQNKAL---QSEVR---------KLQTA-VSQQPNKDVVEQME--K 738
Query: 215 VEQEKDVERVRQRAELLE 232
QEKD E++R ELLE
Sbjct: 739 CIQEKD-EKLRTVEELLE 755
Score = 53 (23.7 bits), Expect = 0.00080, Sum P(4) = 0.00080
Identities = 23/85 (27%), Positives = 35/85 (41%)
Query: 159 AKLSPVKLLEETEKAVG--DPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVE 216
A+ S L EE K + D QL +L + L + E +K D N L E
Sbjct: 597 AQTSASVLAEELHKVIAEKDKQLKQTEDSLANEQDHLASKEEELK---DVQNMNFLLKAE 653
Query: 217 QEKDVERVRQRAELLEKVESMKKKL 241
+K ++A +VE M+K +
Sbjct: 654 VQKWQALANEQAATAHEVEKMQKSI 678
Score = 37 (18.1 bits), Expect = 0.00080, Sum P(4) = 0.00080
Identities = 8/30 (26%), Positives = 17/30 (56%)
Query: 88 EESGYIKISLRGDTKEEHLTIMRKIDTRNK 117
E+SG IK +L+ K E ++ ++ + +
Sbjct: 313 EKSGVIKEALKKSNKGELSGLLHQLQEKER 342
>SGD|S000005194 [details] [associations]
symbol:RAD50 "Subunit of MRX complex with Mre11p and Xrs2p"
species:4932 "Saccharomyces cerevisiae" [GO:0004518 "nuclease
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0030870 "Mre11 complex"
evidence=IEA;IPI] [GO:0003691 "double-stranded telomeric DNA
binding" evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0006284 "base-excision repair" evidence=IMP] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] [GO:0007126 "meiosis" evidence=IEA;IMP] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0042162 "telomeric DNA binding" evidence=IDA]
[GO:0006303 "double-strand break repair via nonhomologous end
joining" evidence=IMP] [GO:0032078 "negative regulation of
endodeoxyribonuclease activity" evidence=IDA] [GO:0051880
"G-quadruplex DNA binding" evidence=IDA] [GO:0043047
"single-stranded telomeric DNA binding" evidence=IDA] [GO:0000706
"meiotic DNA double-strand break processing" evidence=TAS]
[GO:0016887 "ATPase activity" evidence=ISS;IDA] [GO:0003690
"double-stranded DNA binding" evidence=IDA;IPI] [GO:0000722
"telomere maintenance via recombination" evidence=IMP] [GO:0042138
"meiotic DNA double-strand break formation" evidence=TAS]
[GO:0000727 "double-strand break repair via break-induced
replication" evidence=TAS] [GO:0000723 "telomere maintenance"
evidence=IMP] [GO:0004017 "adenylate kinase activity"
evidence=IMP;IDA] InterPro:IPR004584 InterPro:IPR007517
Pfam:PF04423 SGD:S000005194 GO:GO:0005739 GO:GO:0005524
GO:GO:0005654 GO:GO:0046872 GO:GO:0006284 GO:GO:0008270
EMBL:BK006947 GO:GO:0016887 GO:GO:0004518 GO:GO:0000706
GO:GO:0006303 GO:GO:0000722 EMBL:X96722 GO:GO:0051880 GO:GO:0042138
GO:GO:0043047 GO:GO:0000727 Reactome:REACT_128851 GO:GO:0032078
GO:GO:0004017 eggNOG:COG0419 GO:GO:0030870 GO:GO:0003691 KO:K10866
InterPro:IPR013134 PANTHER:PTHR18867 TIGRFAMs:TIGR00606
PROSITE:PS51131 GeneTree:ENSGT00390000018781 HOGENOM:HOG000192269
OrthoDB:EOG4C2MJW EMBL:X14814 EMBL:Z71526 PIR:S05808
RefSeq:NP_014149.1 ProteinModelPortal:P12753 SMR:P12753
DIP:DIP-2419N IntAct:P12753 MINT:MINT-435300 STRING:P12753
PaxDb:P12753 PeptideAtlas:P12753 EnsemblFungi:YNL250W GeneID:855471
KEGG:sce:YNL250W CYGD:YNL250w OMA:ECFGANC NextBio:979418
Genevestigator:P12753 GermOnline:YNL250W Uniprot:P12753
Length = 1312
Score = 103 (41.3 bits), Expect = 3.2e-05, Sum P(4) = 3.2e-05
Identities = 53/245 (21%), Positives = 113/245 (46%)
Query: 673 RKRREMENHINLRKRKLE----SIE-KEDDINTALAKLVDQAADLNIQQFKYAIEIKNLL 727
R +RE N I+ R ++LE S++ K+D+ + L K+ ++ D+ ++ + + N L
Sbjct: 900 RSKRENINDIDSRVKELEARIISLKNKKDEAQSVLDKVKNER-DIQVRNKQKTVADINRL 958
Query: 728 VEIVSCKWSYAEKHMAS--IEFDAKIRELEFNLKQHEKLALQASLHYEDCKKEVEHCRKH 785
++ ++ A E I+ELE N Q +L Q L + +E ++
Sbjct: 959 IDRFQTIYNEVVDFEAKGFDELQTTIKELELNKAQMLELKEQLDLKSNEVNEE----KRK 1014
Query: 786 LSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQD-NISQANSIFFLNQNILQEYEH 844
L+D+ + +++ + E +E+ + ++ +E+ I ++ A + ++ QE
Sbjct: 1015 LADSNNEEKNL-----KQNLELIELKSQLQHIESEISRLDVQNAEA----ERDKYQEESL 1065
Query: 845 RQR-QIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEMAVAG 903
R R + E LS++ E+K+ +ID+L + LR I + + + + E+
Sbjct: 1066 RLRTRFEKLSSENAGKLGEMKQLQNQIDSLTHQ----LRTDYKDIEKNYHKEWVELQTRS 1121
Query: 904 EVSLD 908
V+ D
Sbjct: 1122 FVTDD 1126
Score = 67 (28.6 bits), Expect = 3.2e-05, Sum P(4) = 3.2e-05
Identities = 14/43 (32%), Positives = 25/43 (58%)
Query: 28 LHNFMTFDHLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGD 70
+ +F + D + G L L++G NGSGK++++ + A GD
Sbjct: 12 IRSFDSNDRETIEFGKPLTLIVGMNGSGKTTIIECLKYATTGD 54
Score = 60 (26.2 bits), Expect = 3.2e-05, Sum P(4) = 3.2e-05
Identities = 39/140 (27%), Positives = 64/140 (45%)
Query: 368 DKIEKLGSQI--LELGVQANQKRLQKSEKEKILNQNKLT-LRQCSDRLKDMEDKNNKLLH 424
D++++L + I L+L Q L K + N+L L LKD + L +
Sbjct: 283 DQVKRLSNSIDILDLSKPDLQNLLANFSKVLMDKNNQLRDLETDISSLKDRQSSLQSLSN 342
Query: 425 AL-RNSGA-ENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLEDHVGHYI--W 480
+L R G E E Y + H L KEA+ +SN +++ + V H + +
Sbjct: 343 SLIRRQGELEAGKETYEKNRNHLSSL-KEAFQHKFQ--GLSNIENSDMAQ--VNHEMSQF 397
Query: 481 KSFITQDAGDR-DFLAKNLK 499
K+FI+QD D D AK+++
Sbjct: 398 KAFISQDLTDTIDQFAKDIQ 417
Score = 54 (24.1 bits), Expect = 3.2e-05, Sum P(4) = 3.2e-05
Identities = 26/93 (27%), Positives = 45/93 (48%)
Query: 490 DRDFLAKNLKPFDV----PILNY-VSNESSRKEPFQISEEMRALGISARLDQVFDAPHAV 544
D + LA+ LK F LN+ + N + KE Q E I +L+Q + +
Sbjct: 450 DSEELAEKLKSFKSLSTQDSLNHELENLKTYKEKLQSWESEN---IIPKLNQKIEEKN-- 504
Query: 545 KEVLISQFGLDSSYIGSKETDQKADNVAKLGIL 577
E++I + ++ +T+Q+AD AKLG++
Sbjct: 505 NEMIILENQIEKFQDRIMKTNQQADLYAKLGLI 537
>UNIPROTKB|F5H0N7 [details] [associations]
symbol:CLIP1 "CAP-Gly domain-containing linker protein 1"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR001878
SMART:SM00343 GO:GO:0005737 GO:GO:0008270 GO:GO:0003676
HGNC:HGNC:10461 ChiTaRS:CLIP1 EMBL:AC048338 EMBL:AC127002
EMBL:AC079406 EMBL:AC093016 IPI:IPI01013425 Ensembl:ENST00000545889
UCSC:uc001ucj.1 ArrayExpress:F5H0N7 Bgee:F5H0N7 Uniprot:F5H0N7
Length = 1013
Score = 118 (46.6 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 75/315 (23%), Positives = 143/315 (45%)
Query: 647 QRLIEDEAAKLQKEREEIINIVQIEKRKRRE----MENHINLR-KRKLESIEKEDDINTA 701
QR +++ KL ++EE N++ + K RE ME + +R+ + I+ ++ +
Sbjct: 446 QRSMQETVNKLH-QKEEQFNMLSSDLEKLRENLADMEAKFREKDEREEQLIKAKEKLEND 504
Query: 702 LAKLVDQAADLNIQQFKY--AIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLK 759
+A+++ + D + Q K + +K VE + K + A ++ + ++ I ++ +
Sbjct: 505 IAEIMKMSGDNSSQLTKMNDELRLKERDVEELQLKLTKANENASFLQ--KSIEDMTVKAE 562
Query: 760 QHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPEL----EKEFLEMPTTIE 815
Q ++ A A H E+ KKE+E RK LSD +++ E+ EL E+ E T E
Sbjct: 563 QSQQEA--AKKHEEE-KKELE--RK-LSDLEKKMETSHNQCQELKARYERATSETKTKHE 616
Query: 816 E----LEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADK---------KE 862
E L+ + D + N +LQE E ++Q + Q A+ KE
Sbjct: 617 EILQNLQKTLLDTEDKLKGAREENSGLLQELEELRKQADKAKAAQTAEDAMQIMEQMTKE 676
Query: 863 LKRFLAEIDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHES--DFDK-FGI 919
LA ++ K+ L+N + + E +N +E+ + E+ E++ +F K
Sbjct: 677 KTETLASLEDTKQT-NAKLQNELDTLKENNLKNVEELNKSKELLTVENQKMEEFRKEIET 735
Query: 920 LIKVKFRQSGQLEVL 934
L + ++S QL L
Sbjct: 736 LKQAAAQKSQQLSAL 750
Score = 108 (43.1 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 71/304 (23%), Positives = 135/304 (44%)
Query: 650 IEDEAAKLQKEREEIINIVQIEKRKR-REMENHINLRKRKLESI-EKEDDINTALAKLVD 707
IE Q E E + N E+ +EME LR + ++ I EKE+ + +KL D
Sbjct: 353 IEKMRLDYQHEIENLQNQQDSERAAHAKEMEA---LRAKLMKVIKEKENSLEAIRSKL-D 408
Query: 708 QAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDA-----KI--RELEFNLKQ 760
+A D ++ + + + K EI K++ A + S++ K+ +E +FN+
Sbjct: 409 KAEDQHLVEMEDTLN-KLQEAEIKKEKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLS 467
Query: 761 HEKLALQASLHYEDCK-KEVEHCRKHLSDAKRQAES-IAFI---TPELEKEFLEMPTTIE 815
+ L+ +L + K +E + + L AK + E+ IA I + + + +M +
Sbjct: 468 SDLEKLRENLADMEAKFREKDEREEQLIKAKEKLENDIAEIMKMSGDNSSQLTKMNDELR 527
Query: 816 ELEAAIQD---NISQAN-SIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEID 871
E +++ +++AN + FL ++I ++ ++ + K E +KKEL+R L+++
Sbjct: 528 LKERDVEELQLKLTKANENASFLQKSIEDMTVKAEQSQQEAAKKHEEEKKELERKLSDL- 586
Query: 872 ALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDF-DKFGILIKVKFRQSGQ 930
EK + T N ++ + R E E L + D L + SG
Sbjct: 587 ---EKKMETSHNQCQELKARYERATSETKTKHEEILQNLQKTLLDTEDKLKGAREENSGL 643
Query: 931 LEVL 934
L+ L
Sbjct: 644 LQEL 647
Score = 72 (30.4 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 40/161 (24%), Positives = 67/161 (41%)
Query: 86 RGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNN 145
R EE K L TK EH I ++++ +S F K LE T+ + +
Sbjct: 145 RVEEESITKGDLETQTKLEHARI-KELE---QSLLFEKTKADKLQRELEDTRVATVSEKS 200
Query: 146 LTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGD 205
L +D +++ ++ E+ K GD + + L E SS + +E T +
Sbjct: 201 RIMELEKDLALRVQEVAELRRRLESNKPAGDVDMSLS--LLQEISSLQEKLEVTRTDHQR 258
Query: 206 TLNQLK----ALNVEQEKDVERVRQRAELLEKV-ESMKKKL 241
+ LK A +K+++ + E L K ES+K KL
Sbjct: 259 EITSLKEHFGAREETHQKEIKALYTATEKLSKENESLKSKL 299
>DICTYBASE|DDB_G0285911 [details] [associations]
symbol:DDB_G0285911 "LIM-type zinc finger-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0046872 "metal ion binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
dictyBase:DDB_G0285911 GO:GO:0046872 GO:GO:0008270
Gene3D:2.10.110.10 EMBL:AAFI02000082 eggNOG:NOG257706
RefSeq:XP_637999.1 ProteinModelPortal:Q54MJ1
EnsemblProtists:DDB0233145 GeneID:8625350 KEGG:ddi:DDB_G0285911
InParanoid:Q54MJ1 OMA:CDSKFRE Uniprot:Q54MJ1
Length = 1061
Score = 129 (50.5 bits), Expect = 3.5e-05, Sum P(3) = 3.5e-05
Identities = 61/246 (24%), Positives = 113/246 (45%)
Query: 643 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHIN---LRKRKLESIEKEDDIN 699
+Q ++RL + +L+KER E + + K K +E + L + KLE KE D
Sbjct: 537 LQIKERLERERKERLEKERLEYERLETLRKEKEKERKEKFETARLEREKLELELKEKDEK 596
Query: 700 TALAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYA-EKH---MASIEFDAKIRELE 755
K + + + N ++ K ++ K E +S + EK M ++ + ++L+
Sbjct: 597 KREEKRLAKIIEENRKKEKALVDKKLEEQERLSHELKIQKEKEILKMEKLDLQCEKKKLD 656
Query: 756 FNLK--QHEKLALQASLHYEDCKK-EVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPT 812
K Q EK Q L + + K+ E+ ++ ++ ++Q + P L K+ PT
Sbjct: 657 KEKKELQIEKELSQKQLQFIELKQQEINQQQQEINHQQQQQQQTQQQIPLLTKQ----PT 712
Query: 813 TIEELE-AAIQDNISQAN--SIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAE 869
+EE+E +Q+ I Q L Q + +E + R ++ E+ ++E KELK
Sbjct: 713 -VEEIEYERVQEEIKQKKLEREQRLKQQLEEEEKERLKRQEERQKRKEQRDKELKEEELR 771
Query: 870 IDALKE 875
I+A +E
Sbjct: 772 IEAERE 777
Score = 57 (25.1 bits), Expect = 3.5e-05, Sum P(3) = 3.5e-05
Identities = 36/146 (24%), Positives = 67/146 (45%)
Query: 102 KEEHLTI-MRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQFLPQDRVC--EF 158
KEE L K++ K E+ + P+ ++I ++ ++ L Q ++R+ E
Sbjct: 266 KEEQLKRDQEKLEREKKREYH---QQQPQQTQIQIHQQKMLEKERLAQE-EKERLLVEER 321
Query: 159 AKLSPVKL-LEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALN-VE 216
+L+ ++ E+ EK D + + A +EK +L++ +R + K +E
Sbjct: 322 ERLNATRVEREKQEKERLDRERKEREQARLEKE-RLESERLEKERQARVERERKEFERIE 380
Query: 217 QEK-DVERVRQRAELLEKVESMKKKL 241
+EK D E+ R E LE K+KL
Sbjct: 381 KEKRDREQTRLENERLENERLKKEKL 406
Score = 51 (23.0 bits), Expect = 0.00052, Sum P(3) = 0.00052
Identities = 24/109 (22%), Positives = 55/109 (50%)
Query: 134 EITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKL 193
E T+ N ++ N + L ++++ E +L + +E ++ + + +L + E+ +L
Sbjct: 387 EQTRLENERLEN--ERLKKEKL-EKERLENERFEKERQERIENERLENERFER-ERKERL 442
Query: 194 KT--IECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKK 240
+ IE + N L + K E+E+ ++++R E EK+E +K+
Sbjct: 443 EKEKIEKEERENQLRLAKEKEEKEEKERQERQLKERLERKEKLEKERKE 491
Score = 50 (22.7 bits), Expect = 3.5e-05, Sum P(3) = 3.5e-05
Identities = 15/55 (27%), Positives = 30/55 (54%)
Query: 368 DKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDR-LKDMEDKNNK 421
++ E+ + LE + ++R ++ EKE+ Q +L L++ DR K+ +K K
Sbjct: 469 ERQERQLKERLERKEKLEKERKEREEKEEKDRQERLQLKERLDRERKERLEKERK 523
Score = 50 (22.7 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 27/141 (19%), Positives = 57/141 (40%)
Query: 281 IEGKKQEKAILDGDCKKLSSLINENSKRRMDFLEKVDQGVQVQGKYKXXXXXXXXXXXXX 340
+E +KQEK LD + K+ E + + LEK Q +V+ + K
Sbjct: 329 VEREKQEKERLDRERKEREQARLEKERLESERLEKERQA-RVERERKEFERIEKEKRDRE 387
Query: 341 XXILKARXXXXXXXXXXQTVPAYEPPHDKIEKLGSQILELGVQANQKRLQKSEKEKILNQ 400
L+ + + +++ EK + +E + +R ++ KE+ L +
Sbjct: 388 QTRLE-NERLENERLKKEKLEKERLENERFEKERQERIE-NERLENERFERERKER-LEK 444
Query: 401 NKLTLRQCSDRLKDMEDKNNK 421
K+ + ++L+ ++K K
Sbjct: 445 EKIEKEERENQLRLAKEKEEK 465
Score = 45 (20.9 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 14/56 (25%), Positives = 30/56 (53%)
Query: 371 EKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHAL 426
E+L ++ E + ++RL+K + EK +N+L L + + ++ E + +L L
Sbjct: 427 ERLENERFE---RERKERLEKEKIEKEERENQLRLAKEKEEKEEKERQERQLKERL 479
Score = 45 (20.9 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 16/61 (26%), Positives = 31/61 (50%)
Query: 368 DKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRL-------KDMEDKNN 420
++ E+L + +E + NQ RL K ++EK + + RQ +RL K+ +++
Sbjct: 437 ERKERLEKEKIEKEERENQLRLAKEKEEK--EEKERQERQLKERLERKEKLEKERKEREE 494
Query: 421 K 421
K
Sbjct: 495 K 495
Score = 44 (20.5 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 17/54 (31%), Positives = 30/54 (55%)
Query: 368 DKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNK 421
+K+EK + E + Q+RLQ KE++ + K L + +R K+ E+K+ K
Sbjct: 483 EKLEKERKEREEKEEKDRQERLQL--KERLDRERKERLEK--ER-KEREEKDEK 531
Score = 39 (18.8 bits), Expect = 0.00042, Sum P(3) = 0.00042
Identities = 15/60 (25%), Positives = 29/60 (48%)
Query: 368 DKIEKLGSQI-LELGVQANQK----RLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKL 422
+KIEK + L L + +K R ++ KE++ + KL + K+ +D+ +L
Sbjct: 445 EKIEKEERENQLRLAKEKEEKEEKERQERQLKERLERKEKLEKERKEREEKEEKDRQERL 504
>UNIPROTKB|F1NX73 [details] [associations]
symbol:SMC1B "Structural maintenance of chromosomes
protein" species:9031 "Gallus gallus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0030261 "chromosome
condensation" evidence=IEA] [GO:0000775 "chromosome, centromeric
region" evidence=IEA] [GO:0000800 "lateral element" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0007126 "meiosis"
evidence=IEA] [GO:0034991 "nuclear meiotic cohesin complex"
evidence=IEA] InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0007126 GO:GO:0000775 GO:GO:0003677
GO:GO:0006281 GO:GO:0006310 GO:GO:0030261 GO:GO:0000800
GO:GO:0007062 SUPFAM:SSF75553 GO:GO:0030893
GeneTree:ENSGT00580000081569 OMA:QLYHNEK EMBL:AADN02006734
IPI:IPI00572844 Ensembl:ENSGALT00000023005 Uniprot:F1NX73
Length = 1238
Score = 103 (41.3 bits), Expect = 3.6e-05, Sum P(3) = 3.6e-05
Identities = 72/352 (20%), Positives = 150/352 (42%)
Query: 651 EDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKE-DDINTALAKLVDQA 709
E E A LQK+ E+ + V + + + +++ ++ +K ++ + E D++ L L +A
Sbjct: 846 ESEIAGLQKDEEKHLKRVNEIEEEEQHLKDRLSAQKSEIMKTQSEADELRKTLLTLNREA 905
Query: 710 ADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQAS 769
A L Q+ AIE S + +H +E K+++L+ L L S
Sbjct: 906 AKL--QKEAAAIE--------ASLEDKRLRRHNMLLE--CKVQDLKIRL-------LFGS 946
Query: 770 LHYEDCKKEVEHCRK---HLSDAK-----RQAESIAFITPELEKEFLEMPTTIEELEAAI 821
L D EVE RK D + + E+I L K+ ++ + +E+EA +
Sbjct: 947 L---DDISEVEGSRKLGTETEDTQTTGIYEREEAIKIDYSSLPKDLKDLESD-KEIEAHL 1002
Query: 822 ---QDNISQANSIFFL----NQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALK 874
Q I SI N +++ + + + ++ EA +KE + E + +K
Sbjct: 1003 NQMQQEIKSKESILMKTAVPNLRAVEKLQIARNKFQESMEAFEASRKEARISKQEFEEVK 1062
Query: 875 EK----WLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDF-DKFGILIKVKFRQSG 929
++ + + I++ + + + + +S + E + + G ++
Sbjct: 1063 KRRYELFSQCFEHASIVIDQVYKKLCRNSSAQAFLSPENPEEPYLEGIGFNCVAPGKRFM 1122
Query: 930 QLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKM 981
++ LS GGE++V+ + + ++ PF ++DEI+ +D N K+
Sbjct: 1123 PMDSLS-----GGEKTVAALALIFAVHSFRPAPFFILDEIDAALDNTNIDKV 1169
Score = 98 (39.6 bits), Expect = 3.6e-05, Sum P(3) = 3.6e-05
Identities = 49/207 (23%), Positives = 85/207 (41%)
Query: 41 PGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI-----GAYV-KRGEESGYIK 94
P R N +IGPNGSGKS+++ A++ L L R S+ GA+V K + +K
Sbjct: 23 PFMRFNCIIGPNGSGKSNIMDAVSFVLCEKISNL-RVKSVRELIHGAHVGKPVSSTASVK 81
Query: 95 ISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQFLPQDR 154
I + EE T R I SE+ FN K + + + ++ I V + Q
Sbjct: 82 IVYCEEDGEEK-TFSRVIRD-GCSEYIFNDKSITRSAYISELEKIGILVKARNCLIFQGT 139
Query: 155 VCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALN 214
V A P + + E+ Q ++ K K++ E N + + A
Sbjct: 140 VESIAMKKPKERTQLFEQISNSWQYAEEY---ERKKKKMQQAEEDAHFNYNKKKNIAAER 196
Query: 215 VEQEKDVERVRQRAELLEKVESMKKKL 241
+ + + E L+ ++ + + +L
Sbjct: 197 KQAKVEKEEAEHYQMLVRELNANRVQL 223
Score = 93 (37.8 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 64/280 (22%), Positives = 118/280 (42%)
Query: 643 MQTEQR-LIEDEAAKLQ-KEREEI-INIVQIEKRKRREMENHINLRKRKLESIEKE-DDI 698
M+T Q LI+ +A ++ KE I V++ KR R+ E + + K+ ++ +E E D
Sbjct: 284 MKTLQASLIQQKALYIKAKENTSYQIKKVEMSKRSLRDKEKYCDKEKQNIKELEMELHDT 343
Query: 699 NTALAKLVDQAAD---LNIQQFKYA---IEIKNLLVEIVSCKWSYAEKHMASIEFDAKIR 752
A + +A + L +++ + +E L EI K + + + + ++ K
Sbjct: 344 EKAWREFEKEAEEEILLRVERVELRERQLERYKELKEIARRKVATLTQQLGKLRWEQKAD 403
Query: 753 ELEFNLKQHEKLALQASL-----HYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEF 807
E L Q +K ++ ++ E+ KK VE ++ K+ ES+ E +KE
Sbjct: 404 EERMKLYQRKKKEVKETIVQTVEQIEEYKKRVEKLEEY---TKKCTESLE---EEKKKEE 457
Query: 808 LEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKE-LKRF 866
+ + IE I + + N I QN +Y +RQ + A+ E LKR
Sbjct: 458 M-LAKEIENSTTRIAEVNEELNKIVGELQNARIDYHEGKRQ------QMRAEIVESLKRL 510
Query: 867 LAE--IDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGE 904
+ L + P + + + FS+ + VA E
Sbjct: 511 YPDSVFGRLLDLCHPIHKKYQLAVTKVFSKYMTAIVVATE 550
Score = 90 (36.7 bits), Expect = 0.00071, Sum P(3) = 0.00071
Identities = 49/199 (24%), Positives = 85/199 (42%)
Query: 644 QTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALA 703
QT + + E ++K+ + N+ + + E+ N + E + +
Sbjct: 709 QTRLKYSQSELDLIKKKH--LPNVYMEKSKLESELVNTESQHDMIKEGVVQRKLKIEEFQ 766
Query: 704 KLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEK 763
K +++A D Q+F I I+N+ V Y ++H+ E K R LEF Q +
Sbjct: 767 KQINEAEDAVFQEFCEEIGIENIRV--------YEQEHVRRQEEIDK-RRLEFE-NQKTR 816
Query: 764 LALQASLHYEDCKKEVEHCRKHLSDAKRQAES-IAFITPELEKEFLEMPTTIEELEAAIQ 822
L++Q + E +K + K L D + ES IA + + EK L+ IEE E ++
Sbjct: 817 LSVQLEYNREHLQKLTDAVSK-LRDTIHKDESEIAGLQKDEEKH-LKRVNEIEEEEQHLK 874
Query: 823 DNISQANSIFFLNQNILQE 841
D +S S Q+ E
Sbjct: 875 DRLSAQKSEIMKTQSEADE 893
Score = 85 (35.0 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 64/279 (22%), Positives = 121/279 (43%)
Query: 647 QRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEK-----EDDINTA 701
+R IE L ++ E +I+K E+ +K+ L + + E ++ T
Sbjct: 232 ERSIESLKESLDEKNME----ARIKKDSLSTAEDTFRAKKKVLGVLNRDQQQMEREMKTL 287
Query: 702 LAKLVDQAADLNI---QQFKYAIEIKNLLVEIVSCKWSYAEKHMASI-EFDAKIRELEFN 757
A L+ Q A L I + Y I+ + + K Y +K +I E + ++ + E
Sbjct: 288 QASLIQQKA-LYIKAKENTSYQIKKVEMSKRSLRDKEKYCDKEKQNIKELEMELHDTEKA 346
Query: 758 LKQHEKLALQASL----HYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTT 813
++ EK A + L E ++++E K L + R+ +A +T +L K E
Sbjct: 347 WREFEKEAEEEILLRVERVELRERQLERY-KELKEIARR--KVATLTQQLGKLRWEQKAD 403
Query: 814 IEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTK-QEADKKELKRFLAEIDA 872
E ++ Q + ++EY+ R ++E+ + K E+ ++E K+ E+ A
Sbjct: 404 EERMKL-YQRKKKEVKETIVQTVEQIEEYKKRVEKLEEYTKKCTESLEEEKKK--EEMLA 460
Query: 873 LKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHE 911
KE T R +A++NE ++ E+ A +D HE
Sbjct: 461 -KEIENSTTR--IAEVNEELNKIVGELQNA---RIDYHE 493
Score = 38 (18.4 bits), Expect = 3.6e-05, Sum P(3) = 3.6e-05
Identities = 8/36 (22%), Positives = 20/36 (55%)
Query: 394 KEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNS 429
K+++ + T ++C++ L++ + K L + NS
Sbjct: 432 KKRVEKLEEYT-KKCTESLEEEKKKEEMLAKEIENS 466
Score = 37 (18.1 bits), Expect = 4.5e-05, Sum P(3) = 4.5e-05
Identities = 9/35 (25%), Positives = 20/35 (57%)
Query: 382 VQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDME 416
V+ +++ L+ +KEK ++ K +++ L D E
Sbjct: 312 VEMSKRSLR--DKEKYCDKEKQNIKELEMELHDTE 344
>UNIPROTKB|F1RR74 [details] [associations]
symbol:LOC100515063 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005540 "hyaluronic acid binding" evidence=IEA]
InterPro:IPR026203 GO:GO:0005540 OMA:KPFQLQL PANTHER:PTHR18956
EMBL:CU694497 EMBL:CU571276 Ensembl:ENSSSCT00000018534
Uniprot:F1RR74
Length = 606
Score = 129 (50.5 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 70/314 (22%), Positives = 139/314 (44%)
Query: 649 LIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKR--KLESI-EKEDDINTALA-K 704
LI + + + EI N+ ++R E + H L+++ ++ES+ ++E ++++ L K
Sbjct: 288 LINRDRCRDENLNSEIQNL---KERSNLERQEHEELQQKVLQIESLLQQEKELSSNLQQK 344
Query: 705 LVDQAADLNIQQFKYAIEIKNLLVEI--VSCKWSYAEKHMASIEFDAKIRELEFNLKQHE 762
L ++ ++ + E+K L E+ + K AE + +E +A+ R E L + +
Sbjct: 345 LCSFQEEMIKERNLFEEELKQALDELDNLQQKEEQAETLVKQLEKEAESRAEELKLLEEK 404
Query: 763 KLALQASLHYEDC---------KKEVEHCRKHLSDAKRQAESIAFITP-ELEKEFLEMPT 812
+A L D ++ ++L D Q ES +T E+E LE
Sbjct: 405 LKGKEAELEKSDAAHTQATLLLQERYNSTVQNLGDVTAQFESYKTLTASEIEDLKLEN-A 463
Query: 813 TIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDA 872
+++E A + + +N QEY R + DL TK + E+K + +
Sbjct: 464 SLQEKVAKAEKSTEDVQHQILETENANQEYA---RMLLDLQTKSALKEAEIKEIT--VSS 518
Query: 873 LKEKWLPTLRNLVAQINETFSRNFQEMA--VAGEVSLDEHESDFDKFGILIKVKFRQSG- 929
LK+ + L+N + Q E F + +E + E S+ E + +K+ +L + + ++
Sbjct: 519 LKK--ITDLQNQLKQQGEDFKKQLEEETRKIEKENSMAELTEEMNKWRLLYEELYNKTKP 576
Query: 930 ---QLEVLSAHHQS 940
QL+ A Q+
Sbjct: 577 FQLQLDAFEAEKQA 590
Score = 54 (24.1 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 29/156 (18%), Positives = 71/156 (45%)
Query: 102 KEEHLTIMRKIDTRNKSEWFFNGKVVP-KGEVLEITKRF---NIQVNNLTQFLPQDRVCE 157
K+E + + ++ +N E GK+ +G+++ I K + L +++ ++ C
Sbjct: 172 KQEGMEVKLQVTQKNLEE--SQGKIAQLEGKLVSIEKEKMDEKSETEKLLEYI-EEISCA 228
Query: 158 FAKLSPVKL----LEETEKAVGDPQLPV-----QHCALVEKSSKLKTIECTV--KRNGDT 206
++ KL LEE K L + ++ A++ K +C K GD
Sbjct: 229 SDQVEKYKLDIAHLEENLKEKNHEILSLKQSIEENVAMLSKQVDDLNAKCQQLEKEKGDL 288
Query: 207 LNQLKALNVEQEKDVERVRQRAEL-LEKVESMKKKL 241
+N+ + + +++ +++R+ L ++ E +++K+
Sbjct: 289 INRDRCRDENLNSEIQNLKERSNLERQEHEELQQKV 324
>DICTYBASE|DDB_G0272112 [details] [associations]
symbol:myoJ "myosin-5b" species:44689 "Dictyostelium
discoideum" [GO:0051015 "actin filament binding" evidence=IDA]
[GO:0043531 "ADP binding" evidence=IDA] [GO:0042641 "actomyosin"
evidence=IDA] [GO:0033275 "actin-myosin filament sliding"
evidence=IDA] [GO:0030898 "actin-dependent ATPase activity"
evidence=IDA] [GO:0005524 "ATP binding" evidence=IEA;IDA]
[GO:0000331 "contractile vacuole" evidence=IEA;IDA] [GO:0000146
"microfilament motor activity" evidence=IDA] [GO:0016459 "myosin
complex" evidence=IEA] [GO:0003774 "motor activity" evidence=IEA]
[GO:0005773 "vacuole" evidence=IEA] [GO:0005516 "calmodulin
binding" evidence=IEA] [GO:0003779 "actin binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR000048
InterPro:IPR001609 InterPro:IPR002710 InterPro:IPR004009
Pfam:PF00063 Pfam:PF00612 Pfam:PF02736 PRINTS:PR00193
PROSITE:PS50096 PROSITE:PS51126 SMART:SM00015 SMART:SM00242
dictyBase:DDB_G0272112 GO:GO:0005524 GO:GO:0051015
GenomeReviews:CM000151_GR GO:GO:0043531 EMBL:AAFI02000008
GO:GO:0000146 GO:GO:0033275 GO:GO:0000331 InterPro:IPR018444
Pfam:PF01843 eggNOG:COG5022 GO:GO:0016459 GO:GO:0042641
GO:GO:0030898 EMBL:U42409 EMBL:L35322 PIR:T18278 RefSeq:XP_645195.1
ProteinModelPortal:P54697 EnsemblProtists:DDB0185050 GeneID:8618367
KEGG:ddi:DDB_G0272112 BindingDB:P54697 ChEMBL:CHEMBL1781867
Uniprot:P54697
Length = 2245
Score = 121 (47.7 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 75/339 (22%), Positives = 151/339 (44%)
Query: 669 QIEKRKRREMENHINLRKRKLESIEKE-DDINTALAKLVDQAADLNIQQFKYAIEIKNLL 727
Q+++ + R +E + +K+ + I+ E D++ L +L Q + Q E++ L
Sbjct: 1474 QMQQNQSR-IERELEEKKQHITRIDDERDELKKQLTQLQQQHEQSSTQLLLAQNELERLR 1532
Query: 728 VEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYEDCKKEV-EHCRKHL 786
+ + K E +F+ +I+ L K +LQ YE KK++ +
Sbjct: 1533 KKELKYKERGHETSKQQDQFNMEIQSLRITNNDQLK-SLQ---DYEQEKKKLKDKLSSSK 1588
Query: 787 SDAKRQAESIAFITPELE--KEFLE-MPTTIEELEAAIQDNISQANSIFFLNQNILQE-- 841
+A++Q ESI + EL K+ + + + +++ Q+ I ++++++ Q +LQ+
Sbjct: 1589 QEAQQQRESIIKMDAELSAIKQHSQWVENSFTDMKQRNQELI-ESSALY--KQQLLQQTS 1645
Query: 842 -----YEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLVAQINETFSRNF 896
+ ++ +I L + E ++L + E++++K+ Q+N+ N
Sbjct: 1646 TIDSTIKEKENEISKLQQQLETSNQQLHQLKEELNSMKQSNQLESTEQSKQLNQLIQENQ 1705
Query: 897 QEMAVAGEVS--LDEHESDFDKFGILIKVKFRQSGQLEV-LSAHHQSGGERSV----STI 949
Q +V E+S LD+ + K IK + +S ++ V L H G ++ + STI
Sbjct: 1706 QLKSVTNEISKQLDDAVFENQKINNTIKEQEIKSKRMSVELQQHIDEGKQQEIQQLQSTI 1765
Query: 950 LYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRA 988
L Q R+ EI Q M ER+ +LV +
Sbjct: 1766 AQLKQQQQSETD--RLEKEIQQ-MK--RERETQMKLVES 1799
Score = 75 (31.5 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 57/263 (21%), Positives = 107/263 (40%)
Query: 168 EETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDT--LNQLKALNVEQEKD----- 220
+ E + + QL Q +SS+L+ EC K T L+ LN + EKD
Sbjct: 1023 DHLELQLSEIQLKYQELDKSNQSSQLQLSECLSKLEEQTQQLDHSSKLNKKLEKDLSDQH 1082
Query: 221 --VERVR-QRAELLEKVESMKKKLPWLKYDMKKA-EYIXXXXXXXXXXXXXXXXXNTLHE 276
+E+++ Q E ++++ K++ L + K + + NT ++
Sbjct: 1083 DSIEKLQSQFNETEQQLQQFKQQSEELSSKLSKTTQQLDFNKQEFDRLSQERDTDNTNNQ 1142
Query: 277 FSKPIEGKKQEKAILDGDCKKLSSLINENSKRRMDFLEKVDQGVQVQGKYKXXXXXXXXX 336
I+ K+ + L+ D LS I +N +R++ LE D+ ++ +
Sbjct: 1143 LE--IQQLKKANSTLEEDYFSLSG-IRDNLERQV--LELRDENQLIKERLDSLGQQSSQF 1197
Query: 337 XXXXXXILKARXXXXXXXXXXQTVPAYEPPHDKIEKLGSQILELGVQANQKRLQKSE-KE 395
+ K + Q + EKLGS+ E Q NQ L+ ++ K
Sbjct: 1198 QSGAA-LEKQQLEQLVQEQSEQLIKLSS------EKLGSEE-EAKKQINQLELELTDHKS 1249
Query: 396 KILNQNKLTLRQCSDRLKDMEDK 418
K+ Q +LT Q ++++K ++ K
Sbjct: 1250 KLQIQLQLT-EQSNEKIKKLKGK 1271
Score = 75 (31.5 bits), Expect = 0.00061, Sum P(3) = 0.00061
Identities = 29/92 (31%), Positives = 44/92 (47%)
Query: 367 HDKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTL---RQCSDRL---KDMEDKNN 420
HD IEKL SQ E Q Q + Q E L++ L +Q DRL +D ++ NN
Sbjct: 1082 HDSIEKLQSQFNETEQQLQQFKQQSEELSSKLSKTTQQLDFNKQEFDRLSQERDTDNTNN 1141
Query: 421 KL-LHALRNSGAENIFEAYCWLQQHRHELNKE 451
+L + L+ + + + E Y L R L ++
Sbjct: 1142 QLEIQQLKKANS-TLEEDYFSLSGIRDNLERQ 1172
Score = 72 (30.4 bits), Expect = 8.9e-05, Sum P(2) = 8.9e-05
Identities = 41/174 (23%), Positives = 77/174 (44%)
Query: 141 IQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKT-IECT 199
++ L Q L Q++ + KLS KL E E QL ++ L + SKL+ ++ T
Sbjct: 1203 LEKQQLEQ-LVQEQSEQLIKLSSEKLGSEEEAKKQINQLELE---LTDHKSKLQIQLQLT 1258
Query: 200 VKRNGDTLNQLKALNVEQEKDVERVRQRAELLEK----VESMKKKLPWLKYDMKKAEYIX 255
+ N + + +LK E + + ++++Q E +++ VE K L + K E
Sbjct: 1259 EQSN-EKIKKLKGKLEEYQDEKKQLQQELERIKQSKQSVEDEKNSLI-TQLTTVKFESTQ 1316
Query: 256 XXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQ-EKAILDGDCKKLSSLINENSKR 308
+T+ E +K I GK Q E+ D + +K+ +N+ ++
Sbjct: 1317 VSTNVSHQKEKITTLKSTIEELNKSI-GKLQAEQKNKDDEIRKIQFELNDQKQQ 1369
Score = 72 (30.4 bits), Expect = 8.9e-05, Sum P(2) = 8.9e-05
Identities = 65/288 (22%), Positives = 118/288 (40%)
Query: 160 KLSPVKL-LEETEKAVGDPQLPVQHCA--LVEK------SSKL-KTIECTVKRNGDTLNQ 209
+LS ++L +E +K+ QL + C L E+ SSKL K +E + D++ +
Sbjct: 1028 QLSEIQLKYQELDKSNQSSQLQLSECLSKLEEQTQQLDHSSKLNKKLEKDLSDQHDSIEK 1087
Query: 210 LKALNVEQEKDVERVRQRAE-LLEKVESMKKKLPWLK--YDMKKAEYIXXXXXXXXXXXX 266
L++ E E+ +++ +Q++E L K+ ++L + K +D E
Sbjct: 1088 LQSQFNETEQQLQQFKQQSEELSSKLSKTTQQLDFNKQEFDRLSQERDTDNTNNQLEIQQ 1147
Query: 267 XXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENS--KRRMDFLEKVDQGVQVQG 324
+TL E + G I D +++ L +EN K R+D L + Q
Sbjct: 1148 LKKANSTLEEDYFSLSG------IRDNLERQVLELRDENQLIKERLDSLGQQSSQFQSGA 1201
Query: 325 KYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPAYEPP-HDKIEKLGSQILELGVQ 383
+ I + + + E D KL Q L+L Q
Sbjct: 1202 ALEKQQLEQLVQEQSEQLIKLSSEKLGSEEEAKKQINQLELELTDHKSKLQIQ-LQLTEQ 1260
Query: 384 ANQK-RLQKSEKEKILNQNKLTLRQCSDRLKD----MEDKNNKLLHAL 426
+N+K + K + E+ ++ K L+Q +R+K +ED+ N L+ L
Sbjct: 1261 SNEKIKKLKGKLEEYQDEKK-QLQQELERIKQSKQSVEDEKNSLITQL 1307
Score = 38 (18.4 bits), Expect = 0.00061, Sum P(3) = 0.00061
Identities = 10/35 (28%), Positives = 16/35 (45%)
Query: 213 LNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYD 247
+N EK + Q E+ E +K+K+ W D
Sbjct: 502 INYANEKLQQLFNQHVFKEEQQEYIKEKIDWSYID 536
>UNIPROTKB|F1NX72 [details] [associations]
symbol:SMC1B "Structural maintenance of chromosomes
protein" species:9031 "Gallus gallus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=IEA] [GO:0007062 "sister chromatid cohesion" evidence=IEA]
[GO:0030261 "chromosome condensation" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0005694
GO:GO:0006281 GO:GO:0006310 GO:GO:0030261 GO:GO:0007062
SUPFAM:SSF75553 GeneTree:ENSGT00580000081569 EMBL:AADN02006734
IPI:IPI00577909 Ensembl:ENSGALT00000023006 Uniprot:F1NX72
Length = 1234
Score = 102 (41.0 bits), Expect = 4.5e-05, Sum P(3) = 4.5e-05
Identities = 61/337 (18%), Positives = 136/337 (40%)
Query: 651 EDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKE-DDINTALAKLVDQA 709
E E A LQK+ E+ + V + + + +++ ++ +K ++ + E D++ L L +A
Sbjct: 846 ESEIAGLQKDEEKHLKRVNEIEEEEQHLKDRLSAQKSEIMKTQSEADELRKTLLTLNREA 905
Query: 710 ADLNIQQ--FKYAIEIKNLLVE--IVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLA 765
A L + + ++E K L ++ CK + + D I E+E + +
Sbjct: 906 AKLQKEAAAIEASLEDKRLRRHNMLLECKVQDLKIRLLFGSLD-DISEVELGTETEDTQT 964
Query: 766 LQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNI 825
E K + K L D + E A + ++++E + + ++ A+ N+
Sbjct: 965 TGIYEREEAIKIDYSSLPKDLKDLESDKEIEAHLN-QMQQEIKSKESIL--MKTAVP-NL 1020
Query: 826 SQANSIFFLNQNILQEYEHRQRQIEDLS-TKQEADKKELKRFLAEIDALKEKWLPTLRNL 884
+ + E + ++ +KQE ++ + +R+ L + +
Sbjct: 1021 RAVEKLQIARNKFQESMEAFEASRKEARISKQEFEEVKKRRY-----ELFSQCFEHASIV 1075
Query: 885 VAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVLSAHHQSGGER 944
+ Q+ + RN A + +E + F + K + SGGE+
Sbjct: 1076 IDQVYKKLCRNSSAQAFLSPENPEEPYLEGIGFNCVAPGK-------RFMPMDSLSGGEK 1128
Query: 945 SVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKM 981
+V+ + + ++ PF ++DEI+ +D N K+
Sbjct: 1129 TVAALALIFAVHSFRPAPFFILDEIDAALDNTNIDKV 1165
Score = 98 (39.6 bits), Expect = 4.5e-05, Sum P(3) = 4.5e-05
Identities = 49/207 (23%), Positives = 85/207 (41%)
Query: 41 PGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI-----GAYV-KRGEESGYIK 94
P R N +IGPNGSGKS+++ A++ L L R S+ GA+V K + +K
Sbjct: 23 PFMRFNCIIGPNGSGKSNIMDAVSFVLCEKISNL-RVKSVRELIHGAHVGKPVSSTASVK 81
Query: 95 ISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQFLPQDR 154
I + EE T R I SE+ FN K + + + ++ I V + Q
Sbjct: 82 IVYCEEDGEEK-TFSRVIRD-GCSEYIFNDKSITRSAYISELEKIGILVKARNCLIFQGT 139
Query: 155 VCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALN 214
V A P + + E+ Q ++ K K++ E N + + A
Sbjct: 140 VESIAMKKPKERTQLFEQISNSWQYAEEY---ERKKKKMQQAEEDAHFNYNKKKNIAAER 196
Query: 215 VEQEKDVERVRQRAELLEKVESMKKKL 241
+ + + E L+ ++ + + +L
Sbjct: 197 KQAKVEKEEAEHYQMLVRELNANRVQL 223
Score = 93 (37.8 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 64/280 (22%), Positives = 118/280 (42%)
Query: 643 MQTEQR-LIEDEAAKLQ-KEREEI-INIVQIEKRKRREMENHINLRKRKLESIEKE-DDI 698
M+T Q LI+ +A ++ KE I V++ KR R+ E + + K+ ++ +E E D
Sbjct: 284 MKTLQASLIQQKALYIKAKENTSYQIKKVEMSKRSLRDKEKYCDKEKQNIKELEMELHDT 343
Query: 699 NTALAKLVDQAAD---LNIQQFKYA---IEIKNLLVEIVSCKWSYAEKHMASIEFDAKIR 752
A + +A + L +++ + +E L EI K + + + + ++ K
Sbjct: 344 EKAWREFEKEAEEEILLRVERVELRERQLERYKELKEIARRKVATLTQQLGKLRWEQKAD 403
Query: 753 ELEFNLKQHEKLALQASL-----HYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEF 807
E L Q +K ++ ++ E+ KK VE ++ K+ ES+ E +KE
Sbjct: 404 EERMKLYQRKKKEVKETIVQTVEQIEEYKKRVEKLEEY---TKKCTESLE---EEKKKEE 457
Query: 808 LEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKE-LKRF 866
+ + IE I + + N I QN +Y +RQ + A+ E LKR
Sbjct: 458 M-LAKEIENSTTRIAEVNEELNKIVGELQNARIDYHEGKRQ------QMRAEIVESLKRL 510
Query: 867 LAE--IDALKEKWLPTLRNLVAQINETFSRNFQEMAVAGE 904
+ L + P + + + FS+ + VA E
Sbjct: 511 YPDSVFGRLLDLCHPIHKKYQLAVTKVFSKYMTAIVVATE 550
Score = 90 (36.7 bits), Expect = 0.00070, Sum P(3) = 0.00070
Identities = 49/199 (24%), Positives = 85/199 (42%)
Query: 644 QTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALA 703
QT + + E ++K+ + N+ + + E+ N + E + +
Sbjct: 709 QTRLKYSQSELDLIKKKH--LPNVYMEKSKLESELVNTESQHDMIKEGVVQRKLKIEEFQ 766
Query: 704 KLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEK 763
K +++A D Q+F I I+N+ V Y ++H+ E K R LEF Q +
Sbjct: 767 KQINEAEDAVFQEFCEEIGIENIRV--------YEQEHVRRQEEIDK-RRLEFE-NQKTR 816
Query: 764 LALQASLHYEDCKKEVEHCRKHLSDAKRQAES-IAFITPELEKEFLEMPTTIEELEAAIQ 822
L++Q + E +K + K L D + ES IA + + EK L+ IEE E ++
Sbjct: 817 LSVQLEYNREHLQKLTDAVSK-LRDTIHKDESEIAGLQKDEEKH-LKRVNEIEEEEQHLK 874
Query: 823 DNISQANSIFFLNQNILQE 841
D +S S Q+ E
Sbjct: 875 DRLSAQKSEIMKTQSEADE 893
Score = 85 (35.0 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 64/279 (22%), Positives = 121/279 (43%)
Query: 647 QRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEK-----EDDINTA 701
+R IE L ++ E +I+K E+ +K+ L + + E ++ T
Sbjct: 232 ERSIESLKESLDEKNME----ARIKKDSLSTAEDTFRAKKKVLGVLNRDQQQMEREMKTL 287
Query: 702 LAKLVDQAADLNI---QQFKYAIEIKNLLVEIVSCKWSYAEKHMASI-EFDAKIRELEFN 757
A L+ Q A L I + Y I+ + + K Y +K +I E + ++ + E
Sbjct: 288 QASLIQQKA-LYIKAKENTSYQIKKVEMSKRSLRDKEKYCDKEKQNIKELEMELHDTEKA 346
Query: 758 LKQHEKLALQASL----HYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTT 813
++ EK A + L E ++++E K L + R+ +A +T +L K E
Sbjct: 347 WREFEKEAEEEILLRVERVELRERQLERY-KELKEIARR--KVATLTQQLGKLRWEQKAD 403
Query: 814 IEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTK-QEADKKELKRFLAEIDA 872
E ++ Q + ++EY+ R ++E+ + K E+ ++E K+ E+ A
Sbjct: 404 EERMKL-YQRKKKEVKETIVQTVEQIEEYKKRVEKLEEYTKKCTESLEEEKKK--EEMLA 460
Query: 873 LKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHE 911
KE T R +A++NE ++ E+ A +D HE
Sbjct: 461 -KEIENSTTR--IAEVNEELNKIVGELQNA---RIDYHE 493
Score = 38 (18.4 bits), Expect = 4.5e-05, Sum P(3) = 4.5e-05
Identities = 8/36 (22%), Positives = 20/36 (55%)
Query: 394 KEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNS 429
K+++ + T ++C++ L++ + K L + NS
Sbjct: 432 KKRVEKLEEYT-KKCTESLEEEKKKEEMLAKEIENS 466
Score = 37 (18.1 bits), Expect = 5.6e-05, Sum P(3) = 5.6e-05
Identities = 9/35 (25%), Positives = 20/35 (57%)
Query: 382 VQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDME 416
V+ +++ L+ +KEK ++ K +++ L D E
Sbjct: 312 VEMSKRSLR--DKEKYCDKEKQNIKELEMELHDTE 344
>UNIPROTKB|K7GMY0 [details] [associations]
symbol:LOC100515063 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005540 "hyaluronic acid binding" evidence=IEA]
InterPro:IPR026203 PANTHER:PTHR18956 GeneTree:ENSGT00390000007135
EMBL:CU694497 EMBL:CU571276 Ensembl:ENSSSCT00000034673
Uniprot:K7GMY0
Length = 626
Score = 129 (50.5 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 70/314 (22%), Positives = 139/314 (44%)
Query: 649 LIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKR--KLESI-EKEDDINTALA-K 704
LI + + + EI N+ ++R E + H L+++ ++ES+ ++E ++++ L K
Sbjct: 217 LINRDRCRDENLNSEIQNL---KERSNLERQEHEELQQKVLQIESLLQQEKELSSNLQQK 273
Query: 705 LVDQAADLNIQQFKYAIEIKNLLVEI--VSCKWSYAEKHMASIEFDAKIRELEFNLKQHE 762
L ++ ++ + E+K L E+ + K AE + +E +A+ R E L + +
Sbjct: 274 LCSFQEEMIKERNLFEEELKQALDELDNLQQKEEQAETLVKQLEKEAESRAEELKLLEEK 333
Query: 763 KLALQASLHYEDC---------KKEVEHCRKHLSDAKRQAESIAFITP-ELEKEFLEMPT 812
+A L D ++ ++L D Q ES +T E+E LE
Sbjct: 334 LKGKEAELEKSDAAHTQATLLLQERYNSTVQNLGDVTAQFESYKTLTASEIEDLKLEN-A 392
Query: 813 TIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDA 872
+++E A + + +N QEY R + DL TK + E+K + +
Sbjct: 393 SLQEKVAKAEKSTEDVQHQILETENANQEYA---RMLLDLQTKSALKEAEIKEIT--VSS 447
Query: 873 LKEKWLPTLRNLVAQINETFSRNFQEMA--VAGEVSLDEHESDFDKFGILIKVKFRQSG- 929
LK+ + L+N + Q E F + +E + E S+ E + +K+ +L + + ++
Sbjct: 448 LKK--ITDLQNQLKQQGEDFKKQLEEETRKIEKENSMAELTEEMNKWRLLYEELYNKTKP 505
Query: 930 ---QLEVLSAHHQS 940
QL+ A Q+
Sbjct: 506 FQLQLDAFEAEKQA 519
Score = 54 (24.1 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 29/156 (18%), Positives = 71/156 (45%)
Query: 102 KEEHLTIMRKIDTRNKSEWFFNGKVVP-KGEVLEITKRF---NIQVNNLTQFLPQDRVCE 157
K+E + + ++ +N E GK+ +G+++ I K + L +++ ++ C
Sbjct: 101 KQEGMEVKLQVTQKNLEE--SQGKIAQLEGKLVSIEKEKMDEKSETEKLLEYI-EEISCA 157
Query: 158 FAKLSPVKL----LEETEKAVGDPQLPV-----QHCALVEKSSKLKTIECTV--KRNGDT 206
++ KL LEE K L + ++ A++ K +C K GD
Sbjct: 158 SDQVEKYKLDIAHLEENLKEKNHEILSLKQSIEENVAMLSKQVDDLNAKCQQLEKEKGDL 217
Query: 207 LNQLKALNVEQEKDVERVRQRAEL-LEKVESMKKKL 241
+N+ + + +++ +++R+ L ++ E +++K+
Sbjct: 218 INRDRCRDENLNSEIQNLKERSNLERQEHEELQQKV 253
>UNIPROTKB|H0YJ97 [details] [associations]
symbol:TRIP11 "Thyroid receptor-interacting protein 11"
species:9606 "Homo sapiens" [GO:0000042 "protein targeting to
Golgi" evidence=IEA] InterPro:IPR000237 PROSITE:PS50913
EMBL:AL049872 GO:GO:0000042 HGNC:HGNC:12305 PRIDE:H0YJ97
Ensembl:ENST00000554357 Bgee:H0YJ97 Uniprot:H0YJ97
Length = 1695
Score = 126 (49.4 bits), Expect = 5.1e-05, Sum P(3) = 5.1e-05
Identities = 50/259 (19%), Positives = 122/259 (47%)
Query: 650 IEDEAAKLQKEREEIINIVQIEKRKRREMENHIN-LRKRKLESIEKEDDINTALAKLVD- 707
++++ Q+ER++++ ++ ++ + ++N + LR ++ S ++ + + L + D
Sbjct: 1251 MQEKTVVFQQERDQVMLALKQKQMENTALQNEVQRLRDKEFRSNQELERLRNHLLESEDS 1310
Query: 708 ---QAADLNIQQFKYAIEIKNLLVEIVSCKWSYAE-KHMASIEFDAKIRELEFNLKQHEK 763
+A ++ K ++ L ++VS + H AS++ ++ +L KQ ++
Sbjct: 1311 YTREALAAEDREAKLRKKVTVLEEKLVSSSNAMENASHQASVQVESLQEQLNVVSKQRDE 1370
Query: 764 LALQASLHYEDCKK-EVEHCRKHLSDAKRQAESIAFITPELEKE---FLEMPTTIEELEA 819
ALQ S+ E K+ + + Q E A + ELEK+ E E LE
Sbjct: 1371 TALQLSVSQEQVKQYALSLANLQMVLEHFQQEEKAMYSAELEKQKQLIAEWKKNAENLEG 1430
Query: 820 ---AIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEK 876
++Q+ + +AN+ + ++ + ++ QIE+L + E ++E+ +D +++K
Sbjct: 1431 KVISLQECLDEANAALDSASRLTEQLDVKEEQIEELKRQNEL-RQEM------LDDVQKK 1483
Query: 877 WLPTLRNLVAQINETFSRN 895
+ + ++++ RN
Sbjct: 1484 LMSLANSSEGKVDKVLMRN 1502
Score = 67 (28.6 bits), Expect = 5.1e-05, Sum P(3) = 5.1e-05
Identities = 39/171 (22%), Positives = 79/171 (46%)
Query: 99 GDTKEEHLTIMRKIDTRNKSEWFFNGKVV-PK--GEVLEITKRFNIQVNNLTQFLPQD-- 153
G KEE+ + +++ R + E V PK V E+ + Q+N + + L ++
Sbjct: 572 GSMKEENNHLQEELE-RLREEQSRTAPVADPKTLDSVTELASEVS-QLNTIKEHLEEEIK 629
Query: 154 ---RVCEFAKLSPVKLLE---ETEKAVGD-----PQLPVQHCAL-VEKSSKLKTIECTVK 201
++ E S ++LL+ E +K + + Q+ H L +EK ++K+++ T++
Sbjct: 630 HHQKIIEDQNQSKMQLLQSLQEQKKEMDEFRYQHEQMNATHTQLFLEKDEEIKSLQKTIE 689
Query: 202 RNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAE 252
Q+K E+ +D++ KV+S+ + K+D+ KAE
Sbjct: 690 -------QIKTQLHEERQDIQTDNSDIFQETKVQSLNIENGSEKHDLSKAE 733
Score = 66 (28.3 bits), Expect = 6.1e-05, Sum P(2) = 6.1e-05
Identities = 25/110 (22%), Positives = 57/110 (51%)
Query: 142 QVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVK 201
Q+++ + PQ C A S V L E+ + + +L +L EK + ++T++
Sbjct: 1031 QLSSASLLTPQSAECLRASKSEV--LSESSELL-QQELEELRKSLQEKDATIRTLQENNH 1087
Query: 202 RNGDTL---NQLKALNVEQ-EKDVERVRQRAELLEKVESMKKKLPWLKYD 247
R D++ ++L+ EQ + ++++++++ ++L+K+ K L K D
Sbjct: 1088 RLSDSIAATSELERKEHEQTDSEIKQLKEKQDVLQKLLKEKDLLIKAKSD 1137
Score = 56 (24.8 bits), Expect = 0.00062, Sum P(3) = 0.00062
Identities = 32/132 (24%), Positives = 68/132 (51%)
Query: 379 ELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAENIFEAY 438
EL VQ +K +Q E LN LT ++ D+++++ D+ NK + + EN+ E
Sbjct: 272 ELDVQ-KEKLIQS---EVALNDLHLTKQKLEDKVENLVDQLNKSQESNVSIQKENL-ELK 326
Query: 439 CWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLEDHVGHYIWK-SFITQDAGDRDFLAKN 497
++Q+ EL++ L++ +++ +++N+ + + + + Q+ + + L +N
Sbjct: 327 EHIRQNEEELSR--IRNELMQ-SLNQDSNSNFKDTLLKEREAEVRNLKQNLSELEQLNEN 383
Query: 498 LKP--FDVPILN 507
LK FDV + N
Sbjct: 384 LKKVAFDVKMEN 395
Score = 48 (22.0 bits), Expect = 5.1e-05, Sum P(3) = 5.1e-05
Identities = 41/153 (26%), Positives = 65/153 (42%)
Query: 360 VPAYEPPHDKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKN 419
+ +YE K++ G ++ + VQ + +L + K+ +L KL + S +L
Sbjct: 987 IQSYEQNETKLKNFGQELAQ--VQHSIGQLCNT-KDLLLG--KLDI--ISPQLSSASLLT 1039
Query: 420 NKLLHALRNSGAENIFEAYCWLQQHRHELNK-----EAYGPVLLEVN--VSNRAHANYLE 472
+ LR S +E + E+ LQQ EL K +A L E N +S+ A
Sbjct: 1040 PQSAECLRASKSEVLSESSELLQQELEELRKSLQEKDATIRTLQENNHRLSDSIAATSEL 1099
Query: 473 DHVGHYIWKSFITQDAGDRDFLAKNLKPFDVPI 505
+ H S I Q +D L K LK D+ I
Sbjct: 1100 ERKEHEQTDSEIKQLKEKQDVLQKLLKEKDLLI 1132
Score = 48 (22.0 bits), Expect = 0.00062, Sum P(3) = 0.00062
Identities = 10/31 (32%), Positives = 19/31 (61%)
Query: 211 KALNVEQEKDVERVRQRAELLEKVESMKKKL 241
K + V Q + VE ++ +L +K++ + KKL
Sbjct: 37 KTIQVLQIEKVESTKKMEQLEDKIKDINKKL 67
>MGI|MGI:104667 [details] [associations]
symbol:Hmmr "hyaluronan mediated motility receptor (RHAMM)"
species:10090 "Mus musculus" [GO:0005540 "hyaluronic acid binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR026203 MGI:MGI:104667 GO:GO:0005737 GO:GO:0009986
GO:GO:0005540 EMBL:CH466609 CTD:3161 eggNOG:NOG146600
HOVERGEN:HBG044411 KO:K06267 PANTHER:PTHR18956 EMBL:AF031932
EMBL:AF079222 EMBL:AL646055 EMBL:AJ005919 EMBL:AJ005920
EMBL:AJ005921 EMBL:AJ005922 EMBL:AJ005923 EMBL:AJ005924 EMBL:X64550
IPI:IPI00120107 IPI:IPI00466219 PIR:JC4298 RefSeq:NP_038580.2
UniGene:Mm.116997 ProteinModelPortal:Q00547 DIP:DIP-46343N
STRING:Q00547 PhosphoSite:Q00547 PaxDb:Q00547 PRIDE:Q00547
Ensembl:ENSMUST00000020579 GeneID:15366 KEGG:mmu:15366
GeneTree:ENSGT00390000007135 HOGENOM:HOG000112920 OMA:QEKYNDT
OrthoDB:EOG4QFWD9 ChiTaRS:HMMR NextBio:287994 Bgee:Q00547
CleanEx:MM_HMMR Genevestigator:Q00547 GermOnline:ENSMUSG00000020330
Uniprot:Q00547
Length = 794
Score = 131 (51.2 bits), Expect = 5.4e-05, Sum P(2) = 5.4e-05
Identities = 65/309 (21%), Positives = 137/309 (44%)
Query: 644 QTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALA 703
+ +RL++ + + E++ + + + K E+E HI + + + ++ N
Sbjct: 393 EQSERLVKQLEEETKSTAEQLTRLDNLLREKEVELEKHIAAHAQAI--LIAQEKYNDTAQ 450
Query: 704 KLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEK 763
L D A L Q KY ++L ++ + S EK+ + + +R++ L+ ++
Sbjct: 451 SLRDVTAQLESVQEKYNDTAQSLR-DVTAQLESEQEKYNDTAQ---SLRDVTAQLESEQE 506
Query: 764 LALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEA---A 820
+ D ++E ++ +D A+S+ +T +LE IE+L+
Sbjct: 507 KYNDTAQSLRDVTAQLESVQEKYNDT---AQSLRDVTAQLESYKSSTLKEIEDLKLENLT 563
Query: 821 IQDNISQAN-SIFFLNQNIL------QEYEHRQRQIEDLSTKQEADKKEL-KRFLAEIDA 872
+Q+ ++ A S+ + Q IL QEY + +++ ST +E + KE+ FL +I
Sbjct: 564 LQEKVAMAEKSVEDVQQQILTAESTNQEYARMVQDLQNRSTLKEEEIKEITSSFLEKITD 623
Query: 873 LKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVK-FRQSGQL 931
LK + + Q+ E R ++ V E++++ ++ + K K F+Q QL
Sbjct: 624 LKNQLRQQDEDFRKQLEEKGKRTAEKENVMTELTMEINKWRLLYEELYEKTKPFQQ--QL 681
Query: 932 EVLSAHHQS 940
+ A Q+
Sbjct: 682 DAFEAEKQA 690
Score = 54 (24.1 bits), Expect = 5.4e-05, Sum P(2) = 5.4e-05
Identities = 29/135 (21%), Positives = 69/135 (51%)
Query: 129 KGEVLEIT-KRFNIQVNNLTQFLPQDRVCEFAK-LSPVKLLEETEKAVGD-PQLPVQHCA 185
KG+++++ K +I+ + + +++ E+ + +S ++ EK D QL
Sbjct: 207 KGKIVQLEGKLVSIEKEKIDEKCETEKLLEYIQEISCAS--DQVEKCKVDIAQLEED--- 261
Query: 186 LVEKSSKLKTIECTVKRNGDTLNQLKALNV-----EQEKD--VERVRQRAELLE-KVESM 237
L EK ++ +++ +++ N Q++ L V E E+D V + R+RAE L +++ +
Sbjct: 262 LKEKDREILSLKQSLEENITFSKQIEDLTVKCQLLETERDNLVSKDRERAETLSAEMQIL 321
Query: 238 KKKLPWLKYDMKKAE 252
++L + + +K +
Sbjct: 322 TERLALERQEYEKLQ 336
Score = 50 (22.7 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 39/165 (23%), Positives = 77/165 (46%)
Query: 95 ISLRGDTKEEHLTIMRKI-DTRNKSEWFFNGK--VVPKGEVLEITKRFNIQVNNLTQFLP 151
+SL+ + EE++T ++I D K + + +V K E + + ++ LT+ L
Sbjct: 270 LSLK-QSLEENITFSKQIEDLTVKCQLLETERDNLVSKDR--ERAETLSAEMQILTERLA 326
Query: 152 QDRVCEFAKLSPVKL----LEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTL 207
+R E+ KL +L L + EK + +L Q C+ E+ + K + K +
Sbjct: 327 LERQ-EYEKLQQKELQSQSLLQQEKELS-ARLQQQLCSFQEEMTSEKNV---FKE--ELK 379
Query: 208 NQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAE 252
L L+ Q+K+ + R +L E+ +S ++L L +++ E
Sbjct: 380 LALAELDAVQQKEEQSERLVKQLEEETKSTAEQLTRLDNLLREKE 424
Score = 43 (20.2 bits), Expect = 0.00071, Sum P(2) = 0.00071
Identities = 14/50 (28%), Positives = 29/50 (58%)
Query: 378 LELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALR 427
+EL +QA QK L +S+ + + + KL + +++ D + + KLL ++
Sbjct: 192 MELKLQATQKDLTESKGKIVQLEGKLVSIE-KEKI-DEKCETEKLLEYIQ 239
Score = 42 (19.8 bits), Expect = 0.00090, Sum P(2) = 0.00090
Identities = 21/74 (28%), Positives = 38/74 (51%)
Query: 152 QDRVCEFAK-LSPVKLLEETEKAVGDPQLP-VQHCALVEKSSKL-KTIECTVKRNGDTLN 208
Q ++C F + ++ K + + E + +L VQ E+S +L K +E K + L
Sbjct: 357 QQQLCSFQEEMTSEKNVFKEELKLALAELDAVQQKE--EQSERLVKQLEEETKSTAEQLT 414
Query: 209 QLKALNVEQEKDVE 222
+L N+ +EK+VE
Sbjct: 415 RLD--NLLREKEVE 426
>MGI|MGI:2442192 [details] [associations]
symbol:Eea1 "early endosome antigen 1" species:10090 "Mus
musculus" [GO:0005515 "protein binding" evidence=IPI] [GO:0005545
"1-phosphatidylinositol binding" evidence=ISO] [GO:0005622
"intracellular" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005768 "endosome" evidence=IDA] [GO:0005769 "early endosome"
evidence=ISO;ISA;IDA] [GO:0005829 "cytosol" evidence=ISO]
[GO:0005969 "serine-pyruvate aminotransferase complex"
evidence=IDA] [GO:0006897 "endocytosis" evidence=ISO] [GO:0006906
"vesicle fusion" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0019897
"extrinsic to plasma membrane" evidence=ISO] [GO:0030742
"GTP-dependent protein binding" evidence=ISO] [GO:0042803 "protein
homodimerization activity" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0055037 "recycling endosome"
evidence=ISO] InterPro:IPR000306 InterPro:IPR007087
InterPro:IPR015880 Pfam:PF01363 PROSITE:PS00028 PROSITE:PS50157
SMART:SM00064 SMART:SM00355 MGI:MGI:2442192 GO:GO:0005829
GO:GO:0031901 GO:GO:0046872 GO:GO:0005545 GO:GO:0008270
GO:GO:0006897 GO:GO:0019897 Gene3D:3.30.40.10 InterPro:IPR017455
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
PROSITE:PS50178 eggNOG:NOG12793 GO:GO:0005769 GO:GO:0006906
CTD:8411 HOGENOM:HOG000112329 HOVERGEN:HBG039440 KO:K12478
OMA:LKEQCKT OrthoDB:EOG4MSCXG GO:GO:0005969 EMBL:BC075637
EMBL:AK046231 IPI:IPI00453776 RefSeq:NP_001001932.1
UniGene:Mm.210035 UniGene:Mm.490373 ProteinModelPortal:Q8BL66
SMR:Q8BL66 IntAct:Q8BL66 STRING:Q8BL66 PhosphoSite:Q8BL66
REPRODUCTION-2DPAGE:IPI00453776 PaxDb:Q8BL66 PRIDE:Q8BL66
Ensembl:ENSMUST00000053484 GeneID:216238 KEGG:mmu:216238
UCSC:uc007gwu.1 GeneTree:ENSGT00700000104373 InParanoid:Q8BL66
NextBio:375093 Bgee:Q8BL66 CleanEx:MM_EEA1 Genevestigator:Q8BL66
GermOnline:ENSMUSG00000036499 Uniprot:Q8BL66
Length = 1411
Score = 116 (45.9 bits), Expect = 5.4e-05, Sum P(2) = 5.4e-05
Identities = 57/259 (22%), Positives = 122/259 (47%)
Query: 643 MQTEQRLIED-EAAKLQKERE---EIINIVQIEKRK-RREME-NHIN--LRKRKLESIEK 694
++ + + +ED + K KE+E E + ++E+ K R+E E +N L+ K ESI++
Sbjct: 1098 LKEQSKALEDAQREKSVKEKELVAEKSKLAEMEEIKCRQEKEITKLNEELKSHKQESIKE 1157
Query: 695 EDDINTALAKLVDQAADLN--IQQFKYAIE----IKNLLVEIVSCKWSYAEKHMASIE-- 746
++ A L+ Q +L + K A+E + L+ E V + ++ + E
Sbjct: 1158 ITNLKDAKQLLIQQKLELQGRVDSLKAALEQEKESQQLMREQVKKEEEKRKEEFSEKEAK 1217
Query: 747 FDAKIRELEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKE 806
++I+E E +K+HE+ + ++ +V ++L K++ +S ELEK+
Sbjct: 1218 LHSEIKEKEAGMKKHEENEAKLTM-------QVTTLNENLGTVKKEWQSSQRRVSELEKQ 1270
Query: 807 FLEMPTTIEELEAAIQDNISQANSIF---FLNQNILQEYEHR----QRQIEDLSTK-QEA 858
++ I LEA +Q+N + ++ + +++ + + QR++++ + QE
Sbjct: 1271 TDDLRGEIAVLEATVQNNQDERRALLERCLKGEGEIEKLQTKALELQRKLDNTTAAVQEL 1330
Query: 859 DKKELKRFLAEIDALKEKW 877
++ + AL KW
Sbjct: 1331 GRENQSLQIKHTQALNRKW 1349
Score = 112 (44.5 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 71/289 (24%), Positives = 136/289 (47%)
Query: 643 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHIN--LRKRKLESI------EK 694
+ T+ L E ++ +E+EE+++ +++ + + E+ +I L K++ E++ EK
Sbjct: 759 LSTDLELRNAELSRELQEQEEVVSCTKLDLQNKSEILENIKQTLTKKEEENVVLKQEFEK 818
Query: 695 -EDDINTALAKLVD--QAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKI 751
D T +L D QAA + K + LL E+ + K EK ++ + K
Sbjct: 819 LSQDSKTQHKELGDRMQAAVTELTAVKAQKDA--LLAELSTTK----EK-LSKVSDSLKN 871
Query: 752 RELEFNLKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMP 811
+ EF K+++K A L E KE++H + QAES +L+K +
Sbjct: 872 SKSEFE-KENQK-GKAAVLDLEKACKELKH------QLQVQAESALKEQEDLKKSLEKEK 923
Query: 812 TTIEELEA---AIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLA 868
T ++L+ +++ +SQA + L Q E + Q I L E KK+++
Sbjct: 924 ETSQQLKIELNSVKGEVSQAQNT--LKQKEKDE-QQLQGTINQLKQSAEQKKKQIEALQG 980
Query: 869 EI-DALKEKWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDK 916
E+ +A+ +K + L N ++ + S+ QE+A A + L +S+++K
Sbjct: 981 EVKNAVSQKTV--LEN---KLQQQSSQAAQELA-AEKGKLSALQSNYEK 1023
Score = 75 (31.5 bits), Expect = 5.4e-05, Sum P(2) = 5.4e-05
Identities = 54/225 (24%), Positives = 99/225 (44%)
Query: 100 DTKEEHLTIMRKIDTRNKSEWFFNGKVVP-KGEVLEI--TKRFNIQVNNLTQFLPQDRVC 156
D KE+HL++ +K++ G + + + LE+ +K +Q + L D
Sbjct: 713 DHKEKHLSLEQKVED-------LEGHIKKLEADALEVKASKEQALQSLQQQRQLSTDLEL 765
Query: 157 EFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVE 216
A+LS + L+E E+ V +L +Q+ KS L+ I+ T+ + + LK E
Sbjct: 766 RNAELS--RELQEQEEVVSCTKLDLQN-----KSEILENIKQTLTKKEEENVVLKQ---E 815
Query: 217 QEK-DVERVRQRAELLEKVESMKKKLPWLKYDMKKAEYIXXXXXXXXXXXXXXXXXNTLH 275
EK + Q EL +++++ +L +K K A N+
Sbjct: 816 FEKLSQDSKTQHKELGDRMQAAVTELTAVKAQ-KDALLAELSTTKEKLSKVSDSLKNSKS 874
Query: 276 EFSKPIEGKKQEKAILDGD--CKKLSSLIN---ENSKRRMDFLEK 315
EF K E +K + A+LD + CK+L + E++ + + L+K
Sbjct: 875 EFEK--ENQKGKAAVLDLEKACKELKHQLQVQAESALKEQEDLKK 917
Score = 70 (29.7 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 68/360 (18%), Positives = 129/360 (35%)
Query: 183 HCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQE-KDVERVRQRAE--LLEKVESMKK 239
HC L+E +L +K L+ K + EQ+ D++ R E L EKV + +
Sbjct: 420 HCKLLETERQLGEAHGRLKEQRQ-LSSEKLMEKEQQVADLQLKLSRLEEQLKEKVTNSTE 478
Query: 240 KLPWLKYDMKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLS 299
L + K ++ N L + + I K Q+ L+ +K
Sbjct: 479 LQHQL--EKSKQQHQEQQALQQSATAKLREAQNDLEQVLRQIGDKDQKIQNLEALLQKGK 536
Query: 300 SLINENSKRRMDFLEKVDQGVQVQGKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQT 359
++ K R D K+ G +G+ + + +
Sbjct: 537 ESVSLLEKEREDLYAKIQAG---EGETAVLNQLQEKNHALQQQLTQLTEKLKNQSESHKQ 593
Query: 360 VPAYEPPHDKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDK- 418
A E HD++++ + + + SE LN++K + Q ++K +
Sbjct: 594 --AEENLHDQVQEQKAHLRAAQDRVLSLETSVSELSSQLNESKEKVSQLDIQIKAKTELL 651
Query: 419 -NNKLLHALRNSGAENIFE-AYCWLQQHRHELNKEAYGPVLLEVNVSNRA-HANYLEDHV 475
+ + A + + +N + A LQ + ELNK + L + H LE H+
Sbjct: 652 LSAEAAKAAQRADLQNHLDTAQHALQDKQQELNKVSVQLDQLTAKFQEKQEHCIQLESHL 711
Query: 476 GHYIWKSF-ITQDAGDRDFLAKNLKPFDVPILNYVSNESSRKEPFQISEEMRALGISARL 534
+ K + Q D L ++K + L ++S+++ Q ++ R L L
Sbjct: 712 KDHKEKHLSLEQKVED---LEGHIKKLEADALEV---KASKEQALQSLQQQRQLSTDLEL 765
>UNIPROTKB|E1BUP9 [details] [associations]
symbol:CENPF "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] InterPro:IPR019513
Pfam:PF10473 GeneTree:ENSGT00700000104127 InterPro:IPR018463
InterPro:IPR018302 Pfam:PF10481 Pfam:PF10490 EMBL:AADN02012085
EMBL:AADN02012086 IPI:IPI00820267 Ensembl:ENSGALT00000038507
ArrayExpress:E1BUP9 Uniprot:E1BUP9
Length = 2803
Score = 125 (49.1 bits), Expect = 6.0e-05, Sum P(3) = 6.0e-05
Identities = 58/240 (24%), Positives = 120/240 (50%)
Query: 651 EDEAAKLQK-EREEII--NIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALA--KL 705
ED A +++ ERE I N+++ K ++ + + L+S+EK D ++ L KL
Sbjct: 1992 EDSAKTIRRLEREVKIQTNLLETAKSDTDQLSGEKDHLLQNLQSLEK-DALSFRLEEEKL 2050
Query: 706 VDQAADLN-----IQQFKYAIEIKNLLVEIVSCKWS-YAEKHMASI-EFDAKIRELEFNL 758
+Q ADLN + + ++ K +EI + K S Y + + E A++ + +
Sbjct: 2051 QNQVADLNKEKEVLMRESEMMQSKLSALEIENSKLSRYLDGLITEKRELAARLNSAQKEV 2110
Query: 759 KQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELE 818
Q + + + E +++ H + L + +R+++++ LE+E LEM E LE
Sbjct: 2111 NQMREGMEKLKIKIESDERKKRHIAEKLKENERKSDALLDKVERLERE-LEMSE--ENLE 2167
Query: 819 -AAIQDNISQANSIFFLNQN--ILQEYEHRQRQIEDLSTKQEA---DKKELKRFLAEIDA 872
A +Q ++A + F+ + + ++ + Q QI+DL++++E D KE + + E+++
Sbjct: 2168 DAVVQLETAKAEAETFITEKEEMAEKLKCLQSQIDDLTSQKECLAKDSKEKQERILELES 2227
Score = 114 (45.2 bits), Expect = 0.00020, Sum P(3) = 0.00020
Identities = 67/269 (24%), Positives = 122/269 (45%)
Query: 660 EREEIINIVQIE-KRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAADLNIQQFK 718
+ E+ I+ +Q E +R+++ I L + E + + D++ +++ + L Q K
Sbjct: 2440 DAEQAISKLQEEFTMERKKLAEQIQLLQEHSE--QNKIDLHLVVSEKHELTKSLGAVQ-K 2496
Query: 719 YAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYEDCKKE 778
E +N++ +S Y +K + E +E + LK+ + + + E C+++
Sbjct: 2497 ELQEKENIMKREIS---KYQDK-LLQTE-----KEHQNALKEANR---KNEIQIEACQEK 2544
Query: 779 VEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNI 838
V +S K + E + EL E T+ EL DNI N+I LN+
Sbjct: 2545 VNSLECFISSQKLEIEHLNSTKEELNNSLKEANQTLGELLKLKADNI---NTIVQLNKE- 2600
Query: 839 LQEYEHRQRQIEDLSTKQ-EADKKELKRFLAEIDAL-KEKWLPTLRNLVAQINETFSRNF 896
+E+ + Q+ S KQ E +K+ L++ LA+ + L K+K T N I E
Sbjct: 2601 -KEFVQSEVQLWIKSCKQMEQEKEVLQKQLADCEELLKKKDKGTDENA---ITEEIKLEL 2656
Query: 897 QEMAVAGEVSLDEHESDFDKFGILIKVKF 925
+E+ A EV E + +K+ LI VK+
Sbjct: 2657 EELQEAVEVKTREANENLEKYCSLI-VKY 2684
Score = 68 (29.0 bits), Expect = 0.00020, Sum P(3) = 0.00020
Identities = 41/219 (18%), Positives = 93/219 (42%)
Query: 364 EPPHDKIEKLGSQILELGVQAN----QKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKN 419
E K E++ + L V+ N Q + Q+ E+++ +N + ++L + +
Sbjct: 1898 EQRQTKSEQVNMETHALFVEGNAEILQAKCQQLERDREINLQTIP-SSLQEQLVSVTAER 1956
Query: 420 NKL--LHALRNSGAENIFEAYCWLQQHRHEL--NKEAYGPVLLEVNVSNRAHANYLEDHV 475
N + ++ + + + + Y LQ+ EL NKE + + + N LE
Sbjct: 1957 NHIGQEQSVLSENKKELGQEYQKLQEKLKELETNKEDSAKTIRRLEREVKIQTNLLETA- 2015
Query: 476 GHYIWKSFITQDAGDRDFLAKNLKPFDVPILNY-VSNESSRKEPFQISEEMRALGISARL 534
KS Q +G++D L +NL+ + L++ + E + + +++E L + +
Sbjct: 2016 -----KSDTDQLSGEKDHLLQNLQSLEKDALSFRLEEEKLQNQVADLNKEKEVLMRESEM 2070
Query: 535 DQVFDAPHAVKEVLISQFGLDSSYIGSKETDQKADNVAK 573
Q + ++ +S++ LD +E + ++ K
Sbjct: 2071 MQSKLSALEIENSKLSRY-LDGLITEKRELAARLNSAQK 2108
Score = 62 (26.9 bits), Expect = 6.0e-05, Sum P(3) = 6.0e-05
Identities = 25/110 (22%), Positives = 45/110 (40%)
Query: 370 IEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSD-----RLKDMEDKNNKL-- 422
+ LG + ++ + N + S L+ +LT C D ++ + K+ ++
Sbjct: 1850 VVSLGKEPEKISAKHNVNKTVLSNTTDTLDDIELTKGNCHDLFLGAEIEQRQTKSEQVNM 1909
Query: 423 -LHALRNSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYL 471
HAL G I +A C + E+N + L E VS A N++
Sbjct: 1910 ETHALFVEGNAEILQAKCQQLERDREINLQTIPSSLQEQLVSVTAERNHI 1959
Score = 60 (26.2 bits), Expect = 6.0e-05, Sum P(3) = 6.0e-05
Identities = 29/123 (23%), Positives = 55/123 (44%)
Query: 130 GEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEK 189
G +L+ K ++ + +++ P+ R+ E L ++ E+ K + + QL +Q E+
Sbjct: 1518 GHILDSVKE--LRSSTPSKYNPEGRIKELEMLC--QIYEKVIKVLQN-QLHIQENMKTEE 1572
Query: 190 SSKLKTIECTVKRNGDTLNQLKALNVEQEK-DVERVRQRAELLEKVESMKKKLPWLKYDM 248
++K I + +R D L L Q+K + +L E E K L +D+
Sbjct: 1573 IQEMKNIMLSERREIDKLQNLSDKKEWQQKLNYLTTEMECKLAE--EGKTKNL---SFDL 1627
Query: 249 KKA 251
K A
Sbjct: 1628 KTA 1630
Score = 60 (26.2 bits), Expect = 0.00090, Sum P(2) = 0.00090
Identities = 32/156 (20%), Positives = 66/156 (42%)
Query: 369 KIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRN 428
KI +L SQ+ +L + Q++ Q E L + K + + ++ +N L+
Sbjct: 19 KIHELESQVDKLKKERQQRQFQLESLEAALQKQKQKVENEKNETAILKRENQSLMEL--- 75
Query: 429 SGAENIFEAYCWLQQHRHELN-KEAYGPVLLEVNVSNRAHANYLEDHVGHY---IWKSFI 484
+++ +A Q++ H+L KE+ +L S++ LE + Y + +S
Sbjct: 76 --CDSLDKAK---QKNSHDLQVKESQVNILSGQLSSSKKEIERLEQELKRYKCELERSQQ 130
Query: 485 TQDAGDRDFLAKNLKPFDVPILNYVSNESSRKEPFQ 520
+ A + F K F P+ S+ ++ E +
Sbjct: 131 SLIAAELSFSGTPQKSFTAPLTPVQSHNDAKFEELE 166
>UNIPROTKB|P35580 [details] [associations]
symbol:MYH10 "Myosin-10" species:9606 "Homo sapiens"
[GO:0005516 "calmodulin binding" evidence=IEA] [GO:0001701 "in
utero embryonic development" evidence=IEA] [GO:0001764 "neuron
migration" evidence=IEA] [GO:0001778 "plasma membrane repair"
evidence=IEA] [GO:0005819 "spindle" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0006887 "exocytosis"
evidence=IEA] [GO:0006930 "substrate-dependent cell migration, cell
extension" evidence=IEA] [GO:0007097 "nuclear migration"
evidence=IEA] [GO:0007512 "adult heart development" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=IEA] [GO:0008360
"regulation of cell shape" evidence=IEA] [GO:0016460 "myosin II
complex" evidence=IEA] [GO:0021592 "fourth ventricle development"
evidence=IEA] [GO:0021670 "lateral ventricle development"
evidence=IEA] [GO:0021678 "third ventricle development"
evidence=IEA] [GO:0021680 "cerebellar Purkinje cell layer
development" evidence=IEA] [GO:0030424 "axon" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031594 "neuromuscular
junction" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0043197 "dendritic spine" evidence=IEA]
[GO:0050885 "neuromuscular process controlling balance"
evidence=IEA] [GO:0055003 "cardiac myofibril assembly"
evidence=IEA] [GO:0055015 "ventricular cardiac muscle cell
development" evidence=IEA] [GO:0060041 "retina development in
camera-type eye" evidence=IEA] [GO:0016459 "myosin complex"
evidence=NAS] [GO:0003779 "actin binding" evidence=NAS] [GO:0005524
"ATP binding" evidence=IDA;NAS] [GO:0030496 "midbody" evidence=IDA]
[GO:0032154 "cleavage furrow" evidence=IDA] [GO:0001725 "stress
fiber" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005938 "cell cortex" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0000146 "microfilament motor activity"
evidence=IDA] [GO:0000281 "cytokinesis after mitosis" evidence=IDA]
[GO:0030048 "actin filament-based movement" evidence=IDA]
[GO:0030898 "actin-dependent ATPase activity" evidence=IDA]
[GO:0043531 "ADP binding" evidence=IDA] [GO:0051015 "actin filament
binding" evidence=IDA] [GO:0007411 "axon guidance" evidence=TAS]
InterPro:IPR000048 InterPro:IPR001609 InterPro:IPR002928
InterPro:IPR004009 InterPro:IPR008989 Pfam:PF00063 Pfam:PF00612
Pfam:PF01576 Pfam:PF02736 PRINTS:PR00193 PROSITE:PS50096
SMART:SM00015 SMART:SM00242 GO:GO:0005886 GO:GO:0005524
GO:GO:0005938 Reactome:REACT_111045 GO:GO:0007411 GO:GO:0001764
EMBL:CH471108 GO:GO:0005819 GO:GO:0008360 GO:GO:0008283
GO:GO:0030424 GO:GO:0043025 GO:GO:0001701 GO:GO:0043197
GO:GO:0031594 GO:GO:0050885 GO:GO:0051015 GO:GO:0043531
GO:GO:0030426 GO:GO:0060041 GO:GO:0000281 GO:GO:0000146
GO:GO:0001725 GO:GO:0055003 GO:GO:0006887 GO:GO:0007512
GO:GO:0030496 GO:GO:0032154 GO:GO:0030048 GO:GO:0021670
GO:GO:0007097 eggNOG:COG5022 GO:GO:0055015 GO:GO:0021680
GO:GO:0016459 GO:GO:0001778 GO:GO:0006930 GO:GO:0021678
GO:GO:0021592 GO:GO:0016460 GO:GO:0030898 CTD:4628
HOGENOM:HOG000173958 HOVERGEN:HBG004704 KO:K10352 OrthoDB:EOG4TXBR1
SUPFAM:SSF50084 EMBL:M69181 EMBL:AB210026 EMBL:AC011061
EMBL:AC025518 EMBL:AC026130 EMBL:BC008968 EMBL:BC117690
EMBL:BC117691 EMBL:U15618 EMBL:S67247 IPI:IPI00397526
IPI:IPI00479307 IPI:IPI00790503 PIR:A59252 PIR:I65769
RefSeq:NP_001242941.1 RefSeq:NP_005955.3 UniGene:Hs.16355
ProteinModelPortal:P35580 SMR:P35580 DIP:DIP-31110N IntAct:P35580
MINT:MINT-1133516 STRING:P35580 PhosphoSite:P35580 DMDM:215274129
PaxDb:P35580 PRIDE:P35580 Ensembl:ENST00000269243
Ensembl:ENST00000360416 Ensembl:ENST00000396239 GeneID:4628
KEGG:hsa:4628 UCSC:uc002gll.3 GeneCards:GC17M008318
H-InvDB:HIX0013525 HGNC:HGNC:7568 HPA:CAB017180 MIM:160776
neXtProt:NX_P35580 PharmGKB:PA31366 PhylomeDB:P35580 ChiTaRS:MYH10
GenomeRNAi:4628 NextBio:17814 ArrayExpress:P35580 Bgee:P35580
CleanEx:HS_MYH10 Genevestigator:P35580 GermOnline:ENSG00000133026
Uniprot:P35580
Length = 1976
Score = 146 (56.5 bits), Expect = 6.1e-05, Sum P(2) = 6.1e-05
Identities = 144/771 (18%), Positives = 290/771 (37%)
Query: 160 KLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEK 219
K + +K++ E + + + Q + EK+S+ K K+ D +L+AL E E
Sbjct: 1106 KNNALKVVRELQAQIAELQEDFES----EKASRNKA----EKQKRDLSEELEALKTELED 1157
Query: 220 DVERVRQRAELLEKVESMKKKLPWLKYDMKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSK 279
++ + EL K E +L KKA L E S+
Sbjct: 1158 TLDTTAAQQELRTKREQEVAEL-------KKALEEETKNHEAQIQDMRQRHATALEELSE 1210
Query: 280 PIEGKKQEKAILDGDCKKLSSLINENSKRRMDFLEKVDQGVQVQGKYKXXXXXXXXXXXX 339
+E K+ KA L+ K L +N + + KV Q V+ + ++K
Sbjct: 1211 QLEQAKRFKANLE---KNKQGLETDNKELACEV--KVLQQVKAESEHKRKKLDAQVQELH 1265
Query: 340 XXXILKARXXXXXXXXXXQTVPAYEPPHDKIEKLGSQILELGVQANQKRLQKSEKEKILN 399
R + + +E+ + ++ A Q + +++L
Sbjct: 1266 AKVSEGDRLRVELAEKASKLQNELDNVSTLLEEAEKKGIKFAKDAASLESQLQDTQELLQ 1325
Query: 400 QNKLTLRQCSDRLKDMEDKNNKLLHALRNS--GAENIFEAYCWLQQHRHELNKEAYGPVL 457
+ S R++ +E++ N L +N+ + LQ + K+ L
Sbjct: 1326 EETRQKLNLSSRIRQLEEEKNSLQEQQEEEEEARKNLEKQVLALQSQLADTKKKVDDD-L 1384
Query: 458 LEVNVSNRAHANYLEDH--VGHYIWKSFITQDAGDR--DFLAKNLKPFDVPI---LNYVS 510
+ A L+D + + + + D ++ + L + L V + S
Sbjct: 1385 GTIESLEEAKKKLLKDAEALSQRLEEKALAYDKLEKTKNRLQQELDDLTVDLDHQRQVAS 1444
Query: 511 NESSRKEPF-QISEEMRALGISARLDQVFDAPHA-VKEVLISQFGLDSSY---IGSKETD 565
N +++ F Q+ E ++ ISAR + D A +E L + + +KE
Sbjct: 1445 NLEKKQKKFDQLLAEEKS--ISARYAEERDRAEAEAREKETKALSLARALEEALEAKEEF 1502
Query: 566 QKADNVAKLGILDFWTPENHYRWSISRYGGHVSASVEPVNQSRLLLCSVDGNXXXXXXXX 625
++ + + + D + ++ ++ A + V + R L ++
Sbjct: 1503 ERQNKQLRADMEDLMSSKDDVGKNVHELEKSKRALEQQVEEMRTQLEELEDELQATEDAK 1562
Query: 626 XXXXXXXXXXXXXXXXXMQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLR 685
+QT E++ L K+ E+ ++ E+++R
Sbjct: 1563 LRLEVNMQAMKAQFERDLQTRDEQNEEKKRLLIKQVRELEAELEDERKQRALAVASKKKM 1622
Query: 686 KRKLESIEKE-DDINTALAKLVDQAADLNIQQFKYAIEIKNLLV--EIVSCKWSYAEKHM 742
+ L+ +E + + N A +++ Q L Q Y E++ + + + +EK +
Sbjct: 1623 EIDLKDLEAQIEAANKARDEVIKQLRKLQAQMKDYQRELEEARASRDEIFAQSKESEKKL 1682
Query: 743 ASIEFDAKIRELEFNLKQHEKLALQASLHYEDCKKEVEHC---RKHLSDAKRQAES-IAF 798
S+E A+I +L+ L E+ A ++ E+ + + L D KR+ E+ IA
Sbjct: 1683 KSLE--AEILQLQEELASSERARRHAEQERDELADEITNSASGKSALLDEKRRLEARIAQ 1740
Query: 799 ITPELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEA 858
+ ELE+E + +E L + Q ++ LN + E Q+ ++ + E
Sbjct: 1741 LEEELEEE----QSNMELLNDRFRKTTLQVDT---LNAELAAERSAAQKS-DNARQQLER 1792
Query: 859 DKKELKRFLAEID-ALKEKWLPTLRNL---VAQINETFSRNFQEMAVAGEV 905
KELK L E++ A+K K+ T+ L + Q+ E + +E A A ++
Sbjct: 1793 QNKELKAKLQELEGAVKSKFKATISALEAKIGQLEEQLEQEAKERAAANKL 1843
Score = 110 (43.8 bits), Expect = 0.00074, Sum P(2) = 0.00074
Identities = 51/216 (23%), Positives = 95/216 (43%)
Query: 653 EAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALA--KLVDQAA 710
++A L ++R I Q+E+ E N L R ++ + D +N LA + Q +
Sbjct: 1724 KSALLDEKRRLEARIAQLEEELEEEQSNMELLNDRFRKTTLQVDTLNAELAAERSAAQKS 1783
Query: 711 DLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIE-FDAKIRELEFNLKQHEKLALQAS 769
D QQ + + K L ++ + + K A+I +AKI +LE L+Q K A+
Sbjct: 1784 DNARQQLER--QNKELKAKLQELEGAVKSKFKATISALEAKIGQLEEQLEQEAKERAAAN 1841
Query: 770 LHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQAN 829
+K+++ + D +R A+ ++EK M +LE A ++ ++AN
Sbjct: 1842 KLVRRTEKKLKEIFMQVEDERRHADQYK---EQMEKANARMKQLKRQLEEA-EEEATRAN 1897
Query: 830 SIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKR 865
+ + + +E + E LS + K L+R
Sbjct: 1898 AS---RRKLQRELDDATEANEGLSREVSTLKNRLRR 1930
Score = 73 (30.8 bits), Expect = 0.00074, Sum P(2) = 0.00074
Identities = 41/163 (25%), Positives = 66/163 (40%)
Query: 85 KRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVN 144
KR +E +K +L +TK I D R + E LE KRF +
Sbjct: 1171 KREQEVAELKKALEEETKNHEAQIQ---DMRQRHATALE----ELSEQLEQAKRFKANLE 1223
Query: 145 NLTQFLPQDR---VCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVK 201
Q L D CE L VK E ++ D Q+ H A V + +L+ +E K
Sbjct: 1224 KNKQGLETDNKELACEVKVLQQVKAESEHKRKKLDAQVQELH-AKVSEGDRLR-VELAEK 1281
Query: 202 RNG--DTLNQLKALNVEQEKD-VERVRQRAELLEKVESMKKKL 241
+ + L+ + L E EK ++ + A L +++ ++ L
Sbjct: 1282 ASKLQNELDNVSTLLEEAEKKGIKFAKDAASLESQLQDTQELL 1324
Score = 47 (21.6 bits), Expect = 6.1e-05, Sum P(2) = 6.1e-05
Identities = 31/150 (20%), Positives = 69/150 (46%)
Query: 102 KEEHLTIMRKIDTR-----NKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQFLPQDRVC 156
K+E I+ +++R +++ N K + + ++ ++ + + Q L ++V
Sbjct: 917 KQELEEILHDLESRVEEEEERNQILQNEKKKMQAHIQDLEEQLD-EEEGARQKLQLEKVT 975
Query: 157 EFAKLSPVK----LLEE-TEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLK 211
AK+ ++ LLE+ K + + +L A E SS+L E K N+ +
Sbjct: 976 AEAKIKKMEEEILLLEDQNSKFIKEKKLMEDRIA--ECSSQLAEEEEKAKNLAKIRNKQE 1033
Query: 212 ALNVEQEKDVERVRQRAELLEKVESMKKKL 241
+ + E ER+++ + +++E K+KL
Sbjct: 1034 VMISDLE---ERLKKEEKTRQELEKAKRKL 1060
>UNIPROTKB|E1C703 [details] [associations]
symbol:CENPF "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000085 "G2 phase of mitotic cell cycle" evidence=IEA]
[GO:0000087 "M phase of mitotic cell cycle" evidence=IEA]
[GO:0000776 "kinetochore" evidence=IEA] [GO:0000922 "spindle pole"
evidence=IEA] [GO:0005635 "nuclear envelope" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0008022 "protein
C-terminus binding" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0010389 "regulation of G2/M transition
of mitotic cell cycle" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016202 "regulation of striated muscle
tissue development" evidence=IEA] [GO:0016363 "nuclear matrix"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0042803
"protein homodimerization activity" evidence=IEA] [GO:0045120
"pronucleus" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0051310 "metaphase plate
congression" evidence=IEA] InterPro:IPR019513 Pfam:PF10473
GO:GO:0005737 GO:GO:0005635 GO:GO:0045892 GO:GO:0000776
GO:GO:0015031 GO:GO:0000085 GO:GO:0030496 GO:GO:0016363
GeneTree:ENSGT00700000104127 GO:GO:0000922 GO:GO:0010389
GO:GO:0045120 GO:GO:0000087 GO:GO:0051310 GO:GO:0016202
InterPro:IPR018463 InterPro:IPR018302 Pfam:PF10481 Pfam:PF10490
OMA:SRQQRSF EMBL:AADN02012085 EMBL:AADN02012086 IPI:IPI00593495
Ensembl:ENSGALT00000015897 ArrayExpress:E1C703 Uniprot:E1C703
Length = 2810
Score = 125 (49.1 bits), Expect = 6.1e-05, Sum P(3) = 6.1e-05
Identities = 58/240 (24%), Positives = 120/240 (50%)
Query: 651 EDEAAKLQK-EREEII--NIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALA--KL 705
ED A +++ ERE I N+++ K ++ + + L+S+EK D ++ L KL
Sbjct: 1999 EDSAKTIRRLEREVKIQTNLLETAKSDTDQLSGEKDHLLQNLQSLEK-DALSFRLEEEKL 2057
Query: 706 VDQAADLN-----IQQFKYAIEIKNLLVEIVSCKWS-YAEKHMASI-EFDAKIRELEFNL 758
+Q ADLN + + ++ K +EI + K S Y + + E A++ + +
Sbjct: 2058 QNQVADLNKEKEVLMRESEMMQSKLSALEIENSKLSRYLDGLITEKRELAARLNSAQKEV 2117
Query: 759 KQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELE 818
Q + + + E +++ H + L + +R+++++ LE+E LEM E LE
Sbjct: 2118 NQMREGMEKLKIKIESDERKKRHIAEKLKENERKSDALLDKVERLERE-LEMSE--ENLE 2174
Query: 819 -AAIQDNISQANSIFFLNQN--ILQEYEHRQRQIEDLSTKQEA---DKKELKRFLAEIDA 872
A +Q ++A + F+ + + ++ + Q QI+DL++++E D KE + + E+++
Sbjct: 2175 DAVVQLETAKAEAETFITEKEEMAEKLKCLQSQIDDLTSQKECLAKDSKEKQERILELES 2234
Score = 114 (45.2 bits), Expect = 0.00020, Sum P(3) = 0.00020
Identities = 67/269 (24%), Positives = 122/269 (45%)
Query: 660 EREEIINIVQIE-KRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQAADLNIQQFK 718
+ E+ I+ +Q E +R+++ I L + E + + D++ +++ + L Q K
Sbjct: 2447 DAEQAISKLQEEFTMERKKLAEQIQLLQEHSE--QNKIDLHLVVSEKHELTKSLGAVQ-K 2503
Query: 719 YAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLALQASLHYEDCKKE 778
E +N++ +S Y +K + E +E + LK+ + + + E C+++
Sbjct: 2504 ELQEKENIMKREIS---KYQDK-LLQTE-----KEHQNALKEANR---KNEIQIEACQEK 2551
Query: 779 VEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNI 838
V +S K + E + EL E T+ EL DNI N+I LN+
Sbjct: 2552 VNSLECFISSQKLEIEHLNSTKEELNNSLKEANQTLGELLKLKADNI---NTIVQLNKE- 2607
Query: 839 LQEYEHRQRQIEDLSTKQ-EADKKELKRFLAEIDAL-KEKWLPTLRNLVAQINETFSRNF 896
+E+ + Q+ S KQ E +K+ L++ LA+ + L K+K T N I E
Sbjct: 2608 -KEFVQSEVQLWIKSCKQMEQEKEVLQKQLADCEELLKKKDKGTDENA---ITEEIKLEL 2663
Query: 897 QEMAVAGEVSLDEHESDFDKFGILIKVKF 925
+E+ A EV E + +K+ LI VK+
Sbjct: 2664 EELQEAVEVKTREANENLEKYCSLI-VKY 2691
Score = 68 (29.0 bits), Expect = 0.00020, Sum P(3) = 0.00020
Identities = 41/219 (18%), Positives = 93/219 (42%)
Query: 364 EPPHDKIEKLGSQILELGVQAN----QKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKN 419
E K E++ + L V+ N Q + Q+ E+++ +N + ++L + +
Sbjct: 1905 EQRQTKSEQVNMETHALFVEGNAEILQAKCQQLERDREINLQTIP-SSLQEQLVSVTAER 1963
Query: 420 NKL--LHALRNSGAENIFEAYCWLQQHRHEL--NKEAYGPVLLEVNVSNRAHANYLEDHV 475
N + ++ + + + + Y LQ+ EL NKE + + + N LE
Sbjct: 1964 NHIGQEQSVLSENKKELGQEYQKLQEKLKELETNKEDSAKTIRRLEREVKIQTNLLETA- 2022
Query: 476 GHYIWKSFITQDAGDRDFLAKNLKPFDVPILNY-VSNESSRKEPFQISEEMRALGISARL 534
KS Q +G++D L +NL+ + L++ + E + + +++E L + +
Sbjct: 2023 -----KSDTDQLSGEKDHLLQNLQSLEKDALSFRLEEEKLQNQVADLNKEKEVLMRESEM 2077
Query: 535 DQVFDAPHAVKEVLISQFGLDSSYIGSKETDQKADNVAK 573
Q + ++ +S++ LD +E + ++ K
Sbjct: 2078 MQSKLSALEIENSKLSRY-LDGLITEKRELAARLNSAQK 2115
Score = 62 (26.9 bits), Expect = 6.1e-05, Sum P(3) = 6.1e-05
Identities = 25/110 (22%), Positives = 45/110 (40%)
Query: 370 IEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSD-----RLKDMEDKNNKL-- 422
+ LG + ++ + N + S L+ +LT C D ++ + K+ ++
Sbjct: 1857 VVSLGKEPEKISAKHNVNKTVLSNTTDTLDDIELTKGNCHDLFLGAEIEQRQTKSEQVNM 1916
Query: 423 -LHALRNSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYL 471
HAL G I +A C + E+N + L E VS A N++
Sbjct: 1917 ETHALFVEGNAEILQAKCQQLERDREINLQTIPSSLQEQLVSVTAERNHI 1966
Score = 60 (26.2 bits), Expect = 6.1e-05, Sum P(3) = 6.1e-05
Identities = 29/123 (23%), Positives = 55/123 (44%)
Query: 130 GEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEK 189
G +L+ K ++ + +++ P+ R+ E L ++ E+ K + + QL +Q E+
Sbjct: 1525 GHILDSVKE--LRSSTPSKYNPEGRIKELEMLC--QIYEKVIKVLQN-QLHIQENMKTEE 1579
Query: 190 SSKLKTIECTVKRNGDTLNQLKALNVEQEK-DVERVRQRAELLEKVESMKKKLPWLKYDM 248
++K I + +R D L L Q+K + +L E E K L +D+
Sbjct: 1580 IQEMKNIMLSERREIDKLQNLSDKKEWQQKLNYLTTEMECKLAE--EGKTKNL---SFDL 1634
Query: 249 KKA 251
K A
Sbjct: 1635 KTA 1637
Score = 60 (26.2 bits), Expect = 0.00090, Sum P(2) = 0.00090
Identities = 32/156 (20%), Positives = 66/156 (42%)
Query: 369 KIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRN 428
KI +L SQ+ +L + Q++ Q E L + K + + ++ +N L+
Sbjct: 19 KIHELESQVDKLKKERQQRQFQLESLEAALQKQKQKVENEKNETAILKRENQSLMEL--- 75
Query: 429 SGAENIFEAYCWLQQHRHELN-KEAYGPVLLEVNVSNRAHANYLEDHVGHY---IWKSFI 484
+++ +A Q++ H+L KE+ +L S++ LE + Y + +S
Sbjct: 76 --CDSLDKAK---QKNSHDLQVKESQVNILSGQLSSSKKEIERLEQELKRYKCELERSQQ 130
Query: 485 TQDAGDRDFLAKNLKPFDVPILNYVSNESSRKEPFQ 520
+ A + F K F P+ S+ ++ E +
Sbjct: 131 SLIAAELSFSGTPQKSFTAPLTPVQSHNDAKFEELE 166
>UNIPROTKB|F8W6L6 [details] [associations]
symbol:MYH10 "Myosin-10" species:9606 "Homo sapiens"
[GO:0003774 "motor activity" evidence=IEA] [GO:0051015 "actin
filament binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016459 "myosin complex" evidence=IEA]
InterPro:IPR000048 InterPro:IPR001609 InterPro:IPR002928
InterPro:IPR004009 InterPro:IPR008989 Pfam:PF00063 Pfam:PF00612
Pfam:PF01576 Pfam:PF02736 PRINTS:PR00193 PROSITE:PS50096
SMART:SM00015 SMART:SM00242 GO:GO:0005524 GO:GO:0003774
GO:GO:0016459 SUPFAM:SSF50084 EMBL:AC011061 EMBL:AC025518
EMBL:AC026130 HGNC:HGNC:7568 ChiTaRS:MYH10 IPI:IPI01025705
ProteinModelPortal:F8W6L6 SMR:F8W6L6 PRIDE:F8W6L6
Ensembl:ENST00000379980 ArrayExpress:F8W6L6 Bgee:F8W6L6
Uniprot:F8W6L6
Length = 1992
Score = 146 (56.5 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05
Identities = 144/771 (18%), Positives = 290/771 (37%)
Query: 160 KLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEK 219
K + +K++ E + + + Q + EK+S+ K K+ D +L+AL E E
Sbjct: 1122 KNNALKVVRELQAQIAELQEDFES----EKASRNKA----EKQKRDLSEELEALKTELED 1173
Query: 220 DVERVRQRAELLEKVESMKKKLPWLKYDMKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSK 279
++ + EL K E +L KKA L E S+
Sbjct: 1174 TLDTTAAQQELRTKREQEVAEL-------KKALEEETKNHEAQIQDMRQRHATALEELSE 1226
Query: 280 PIEGKKQEKAILDGDCKKLSSLINENSKRRMDFLEKVDQGVQVQGKYKXXXXXXXXXXXX 339
+E K+ KA L+ K L +N + + KV Q V+ + ++K
Sbjct: 1227 QLEQAKRFKANLE---KNKQGLETDNKELACEV--KVLQQVKAESEHKRKKLDAQVQELH 1281
Query: 340 XXXILKARXXXXXXXXXXQTVPAYEPPHDKIEKLGSQILELGVQANQKRLQKSEKEKILN 399
R + + +E+ + ++ A Q + +++L
Sbjct: 1282 AKVSEGDRLRVELAEKASKLQNELDNVSTLLEEAEKKGIKFAKDAASLESQLQDTQELLQ 1341
Query: 400 QNKLTLRQCSDRLKDMEDKNNKLLHALRNS--GAENIFEAYCWLQQHRHELNKEAYGPVL 457
+ S R++ +E++ N L +N+ + LQ + K+ L
Sbjct: 1342 EETRQKLNLSSRIRQLEEEKNSLQEQQEEEEEARKNLEKQVLALQSQLADTKKKVDDD-L 1400
Query: 458 LEVNVSNRAHANYLEDH--VGHYIWKSFITQDAGDR--DFLAKNLKPFDVPI---LNYVS 510
+ A L+D + + + + D ++ + L + L V + S
Sbjct: 1401 GTIESLEEAKKKLLKDAEALSQRLEEKALAYDKLEKTKNRLQQELDDLTVDLDHQRQVAS 1460
Query: 511 NESSRKEPF-QISEEMRALGISARLDQVFDAPHA-VKEVLISQFGLDSSY---IGSKETD 565
N +++ F Q+ E ++ ISAR + D A +E L + + +KE
Sbjct: 1461 NLEKKQKKFDQLLAEEKS--ISARYAEERDRAEAEAREKETKALSLARALEEALEAKEEF 1518
Query: 566 QKADNVAKLGILDFWTPENHYRWSISRYGGHVSASVEPVNQSRLLLCSVDGNXXXXXXXX 625
++ + + + D + ++ ++ A + V + R L ++
Sbjct: 1519 ERQNKQLRADMEDLMSSKDDVGKNVHELEKSKRALEQQVEEMRTQLEELEDELQATEDAK 1578
Query: 626 XXXXXXXXXXXXXXXXXMQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLR 685
+QT E++ L K+ E+ ++ E+++R
Sbjct: 1579 LRLEVNMQAMKAQFERDLQTRDEQNEEKKRLLIKQVRELEAELEDERKQRALAVASKKKM 1638
Query: 686 KRKLESIEKE-DDINTALAKLVDQAADLNIQQFKYAIEIKNLLV--EIVSCKWSYAEKHM 742
+ L+ +E + + N A +++ Q L Q Y E++ + + + +EK +
Sbjct: 1639 EIDLKDLEAQIEAANKARDEVIKQLRKLQAQMKDYQRELEEARASRDEIFAQSKESEKKL 1698
Query: 743 ASIEFDAKIRELEFNLKQHEKLALQASLHYEDCKKEVEHC---RKHLSDAKRQAES-IAF 798
S+E A+I +L+ L E+ A ++ E+ + + L D KR+ E+ IA
Sbjct: 1699 KSLE--AEILQLQEELASSERARRHAEQERDELADEITNSASGKSALLDEKRRLEARIAQ 1756
Query: 799 ITPELEKEFLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEA 858
+ ELE+E + +E L + Q ++ LN + E Q+ ++ + E
Sbjct: 1757 LEEELEEE----QSNMELLNDRFRKTTLQVDT---LNAELAAERSAAQKS-DNARQQLER 1808
Query: 859 DKKELKRFLAEID-ALKEKWLPTLRNL---VAQINETFSRNFQEMAVAGEV 905
KELK L E++ A+K K+ T+ L + Q+ E + +E A A ++
Sbjct: 1809 QNKELKAKLQELEGAVKSKFKATISALEAKIGQLEEQLEQEAKERAAANKL 1859
Score = 110 (43.8 bits), Expect = 0.00076, Sum P(2) = 0.00076
Identities = 51/216 (23%), Positives = 95/216 (43%)
Query: 653 EAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALA--KLVDQAA 710
++A L ++R I Q+E+ E N L R ++ + D +N LA + Q +
Sbjct: 1740 KSALLDEKRRLEARIAQLEEELEEEQSNMELLNDRFRKTTLQVDTLNAELAAERSAAQKS 1799
Query: 711 DLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIE-FDAKIRELEFNLKQHEKLALQAS 769
D QQ + + K L ++ + + K A+I +AKI +LE L+Q K A+
Sbjct: 1800 DNARQQLER--QNKELKAKLQELEGAVKSKFKATISALEAKIGQLEEQLEQEAKERAAAN 1857
Query: 770 LHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQAN 829
+K+++ + D +R A+ ++EK M +LE A ++ ++AN
Sbjct: 1858 KLVRRTEKKLKEIFMQVEDERRHADQYK---EQMEKANARMKQLKRQLEEA-EEEATRAN 1913
Query: 830 SIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKR 865
+ + + +E + E LS + K L+R
Sbjct: 1914 AS---RRKLQRELDDATEANEGLSREVSTLKNRLRR 1946
Score = 73 (30.8 bits), Expect = 0.00076, Sum P(2) = 0.00076
Identities = 41/163 (25%), Positives = 66/163 (40%)
Query: 85 KRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVN 144
KR +E +K +L +TK I D R + E LE KRF +
Sbjct: 1187 KREQEVAELKKALEEETKNHEAQIQ---DMRQRHATALE----ELSEQLEQAKRFKANLE 1239
Query: 145 NLTQFLPQDR---VCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVK 201
Q L D CE L VK E ++ D Q+ H A V + +L+ +E K
Sbjct: 1240 KNKQGLETDNKELACEVKVLQQVKAESEHKRKKLDAQVQELH-AKVSEGDRLR-VELAEK 1297
Query: 202 RNG--DTLNQLKALNVEQEKD-VERVRQRAELLEKVESMKKKL 241
+ + L+ + L E EK ++ + A L +++ ++ L
Sbjct: 1298 ASKLQNELDNVSTLLEEAEKKGIKFAKDAASLESQLQDTQELL 1340
Score = 47 (21.6 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05
Identities = 31/150 (20%), Positives = 69/150 (46%)
Query: 102 KEEHLTIMRKIDTR-----NKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQFLPQDRVC 156
K+E I+ +++R +++ N K + + ++ ++ + + Q L ++V
Sbjct: 933 KQELEEILHDLESRVEEEEERNQILQNEKKKMQAHIQDLEEQLD-EEEGARQKLQLEKVT 991
Query: 157 EFAKLSPVK----LLEE-TEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQLK 211
AK+ ++ LLE+ K + + +L A E SS+L E K N+ +
Sbjct: 992 AEAKIKKMEEEILLLEDQNSKFIKEKKLMEDRIA--ECSSQLAEEEEKAKNLAKIRNKQE 1049
Query: 212 ALNVEQEKDVERVRQRAELLEKVESMKKKL 241
+ + E ER+++ + +++E K+KL
Sbjct: 1050 VMISDLE---ERLKKEEKTRQELEKAKRKL 1076
>UNIPROTKB|I3LED2 [details] [associations]
symbol:LOC100515063 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005540 "hyaluronic acid binding" evidence=IEA]
InterPro:IPR026203 GO:GO:0005540 PANTHER:PTHR18956
GeneTree:ENSGT00390000007135 EMBL:CU694497 EMBL:CU571276
Ensembl:ENSSSCT00000030611 Uniprot:I3LED2
Length = 703
Score = 129 (50.5 bits), Expect = 6.5e-05, Sum P(2) = 6.5e-05
Identities = 70/314 (22%), Positives = 139/314 (44%)
Query: 649 LIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKR--KLESI-EKEDDINTALA-K 704
LI + + + EI N+ ++R E + H L+++ ++ES+ ++E ++++ L K
Sbjct: 283 LINRDRCRDENLNSEIQNL---KERSNLERQEHEELQQKVLQIESLLQQEKELSSNLQQK 339
Query: 705 LVDQAADLNIQQFKYAIEIKNLLVEI--VSCKWSYAEKHMASIEFDAKIRELEFNLKQHE 762
L ++ ++ + E+K L E+ + K AE + +E +A+ R E L + +
Sbjct: 340 LCSFQEEMIKERNLFEEELKQALDELDNLQQKEEQAETLVKQLEKEAESRAEELKLLEEK 399
Query: 763 KLALQASLHYEDC---------KKEVEHCRKHLSDAKRQAESIAFITP-ELEKEFLEMPT 812
+A L D ++ ++L D Q ES +T E+E LE
Sbjct: 400 LKGKEAELEKSDAAHTQATLLLQERYNSTVQNLGDVTAQFESYKTLTASEIEDLKLEN-A 458
Query: 813 TIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDA 872
+++E A + + +N QEY R + DL TK + E+K + +
Sbjct: 459 SLQEKVAKAEKSTEDVQHQILETENANQEYA---RMLLDLQTKSALKEAEIKEIT--VSS 513
Query: 873 LKEKWLPTLRNLVAQINETFSRNFQEMA--VAGEVSLDEHESDFDKFGILIKVKFRQSG- 929
LK+ + L+N + Q E F + +E + E S+ E + +K+ +L + + ++
Sbjct: 514 LKK--ITDLQNQLKQQGEDFKKQLEEETRKIEKENSMAELTEEMNKWRLLYEELYNKTKP 571
Query: 930 ---QLEVLSAHHQS 940
QL+ A Q+
Sbjct: 572 FQLQLDAFEAEKQA 585
Score = 54 (24.1 bits), Expect = 6.5e-05, Sum P(2) = 6.5e-05
Identities = 29/156 (18%), Positives = 71/156 (45%)
Query: 102 KEEHLTIMRKIDTRNKSEWFFNGKVVP-KGEVLEITKRF---NIQVNNLTQFLPQDRVCE 157
K+E + + ++ +N E GK+ +G+++ I K + L +++ ++ C
Sbjct: 167 KQEGMEVKLQVTQKNLEE--SQGKIAQLEGKLVSIEKEKMDEKSETEKLLEYI-EEISCA 223
Query: 158 FAKLSPVKL----LEETEKAVGDPQLPV-----QHCALVEKSSKLKTIECTV--KRNGDT 206
++ KL LEE K L + ++ A++ K +C K GD
Sbjct: 224 SDQVEKYKLDIAHLEENLKEKNHEILSLKQSIEENVAMLSKQVDDLNAKCQQLEKEKGDL 283
Query: 207 LNQLKALNVEQEKDVERVRQRAEL-LEKVESMKKKL 241
+N+ + + +++ +++R+ L ++ E +++K+
Sbjct: 284 INRDRCRDENLNSEIQNLKERSNLERQEHEELQQKV 319
Score = 49 (22.3 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 20/65 (30%), Positives = 31/65 (47%)
Query: 367 HDK-IEKLGSQILELGVQ--ANQKRLQKSEKEKILNQNKLTLRQCSDRLKDM--EDKNNK 421
+DK ++ L +I L Q A KR+Q E L + + L + ++ LK ED N K
Sbjct: 82 NDKDLKTLEKEIRVLVQQRGAQDKRIQDLEGNASLEKQLIELTRTNELLKSKFSEDSNQK 141
Query: 422 LLHAL 426
+ L
Sbjct: 142 NMRIL 146
>UNIPROTKB|K7GSC4 [details] [associations]
symbol:LOC100515063 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005540 "hyaluronic acid binding" evidence=IEA]
InterPro:IPR026203 PANTHER:PTHR18956 GeneTree:ENSGT00390000007135
EMBL:CU694497 EMBL:CU571276 RefSeq:XP_003134130.2
Ensembl:ENSSSCT00000036191 GeneID:100515063 Uniprot:K7GSC4
Length = 713
Score = 129 (50.5 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 70/314 (22%), Positives = 139/314 (44%)
Query: 649 LIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKR--KLESI-EKEDDINTALA-K 704
LI + + + EI N+ ++R E + H L+++ ++ES+ ++E ++++ L K
Sbjct: 304 LINRDRCRDENLNSEIQNL---KERSNLERQEHEELQQKVLQIESLLQQEKELSSNLQQK 360
Query: 705 LVDQAADLNIQQFKYAIEIKNLLVEI--VSCKWSYAEKHMASIEFDAKIRELEFNLKQHE 762
L ++ ++ + E+K L E+ + K AE + +E +A+ R E L + +
Sbjct: 361 LCSFQEEMIKERNLFEEELKQALDELDNLQQKEEQAETLVKQLEKEAESRAEELKLLEEK 420
Query: 763 KLALQASLHYEDC---------KKEVEHCRKHLSDAKRQAESIAFITP-ELEKEFLEMPT 812
+A L D ++ ++L D Q ES +T E+E LE
Sbjct: 421 LKGKEAELEKSDAAHTQATLLLQERYNSTVQNLGDVTAQFESYKTLTASEIEDLKLEN-A 479
Query: 813 TIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDA 872
+++E A + + +N QEY R + DL TK + E+K + +
Sbjct: 480 SLQEKVAKAEKSTEDVQHQILETENANQEYA---RMLLDLQTKSALKEAEIKEIT--VSS 534
Query: 873 LKEKWLPTLRNLVAQINETFSRNFQEMA--VAGEVSLDEHESDFDKFGILIKVKFRQSG- 929
LK+ + L+N + Q E F + +E + E S+ E + +K+ +L + + ++
Sbjct: 535 LKK--ITDLQNQLKQQGEDFKKQLEEETRKIEKENSMAELTEEMNKWRLLYEELYNKTKP 592
Query: 930 ---QLEVLSAHHQS 940
QL+ A Q+
Sbjct: 593 FQLQLDAFEAEKQA 606
Score = 54 (24.1 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 29/156 (18%), Positives = 71/156 (45%)
Query: 102 KEEHLTIMRKIDTRNKSEWFFNGKVVP-KGEVLEITKRF---NIQVNNLTQFLPQDRVCE 157
K+E + + ++ +N E GK+ +G+++ I K + L +++ ++ C
Sbjct: 188 KQEGMEVKLQVTQKNLEE--SQGKIAQLEGKLVSIEKEKMDEKSETEKLLEYI-EEISCA 244
Query: 158 FAKLSPVKL----LEETEKAVGDPQLPV-----QHCALVEKSSKLKTIECTV--KRNGDT 206
++ KL LEE K L + ++ A++ K +C K GD
Sbjct: 245 SDQVEKYKLDIAHLEENLKEKNHEILSLKQSIEENVAMLSKQVDDLNAKCQQLEKEKGDL 304
Query: 207 LNQLKALNVEQEKDVERVRQRAEL-LEKVESMKKKL 241
+N+ + + +++ +++R+ L ++ E +++K+
Sbjct: 305 INRDRCRDENLNSEIQNLKERSNLERQEHEELQQKV 340
>MGI|MGI:1339711 [details] [associations]
symbol:Myh1 "myosin, heavy polypeptide 1, skeletal muscle,
adult" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003774 "motor activity" evidence=IEA]
[GO:0003779 "actin binding" evidence=IEA] [GO:0005516 "calmodulin
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005859 "muscle myosin
complex" evidence=ISO] [GO:0006936 "muscle contraction"
evidence=ISO] [GO:0008152 "metabolic process" evidence=IEA]
[GO:0014704 "intercalated disc" evidence=IDA] [GO:0016459 "myosin
complex" evidence=IEA] [GO:0031672 "A band" evidence=IDA]
[GO:0032982 "myosin filament" evidence=IEA] InterPro:IPR000048
InterPro:IPR001609 InterPro:IPR002928 InterPro:IPR004009
Pfam:PF00063 Pfam:PF01576 Pfam:PF02736 PRINTS:PR00193
PROSITE:PS50096 SMART:SM00015 SMART:SM00242 MGI:MGI:1339711
GO:GO:0005524 GO:GO:0014704 GO:GO:0003774 eggNOG:COG5022
GO:GO:0031672 GO:GO:0005859 GO:GO:0032982 HOVERGEN:HBG004704
KO:K10352 InterPro:IPR015650 PANTHER:PTHR13140:SF22
HOGENOM:HOG000173959 CTD:4619 GeneTree:ENSGT00680000099790
OMA:QPTEEIS EMBL:AL596129 EMBL:BC108329 IPI:IPI00380896
RefSeq:NP_109604.1 UniGene:Mm.477065 ProteinModelPortal:Q5SX40
SMR:Q5SX40 IntAct:Q5SX40 STRING:Q5SX40 PhosphoSite:Q5SX40
PaxDb:Q5SX40 PRIDE:Q5SX40 Ensembl:ENSMUST00000018637
Ensembl:ENSMUST00000075734 Ensembl:ENSMUST00000124516 GeneID:17879
KEGG:mmu:17879 UCSC:uc007jmd.2 InParanoid:Q32P18 NextBio:292673
Bgee:Q5SX40 Genevestigator:Q5SX40 GermOnline:ENSMUSG00000056328
Uniprot:Q5SX40
Length = 1942
Score = 146 (56.5 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 69/314 (21%), Positives = 147/314 (46%)
Query: 643 MQTEQRLIEDEAAKLQKEREEI-INIVQIEKRKRREMENHINLRKRKLESIEKEDDINTA 701
+ ++R +EDE ++L+K+ +++ + + ++EK K EN + ++ +++ T
Sbjct: 943 LTAKKRKLEDECSELKKDIDDLELTLAKVEKEKHAT-ENKVKNLTEEMAGLDETIAKLTK 1001
Query: 702 LAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIR-ELEFNLKQ 760
K + +A + + + N L + + S+E + KIR +LE ++
Sbjct: 1002 EKKALQEAHQQTLDDLQAEEDKVNTLTKAKIKLEQQVDDLEGSLEQEKKIRMDLERAKRK 1061
Query: 761 HE---KLALQASLHYEDCKKEV-EHCRK---HLSDAKRQAESIAFITPELEKEFLEMPTT 813
E KLA ++++ E+ K+++ E +K +S+ + + E + +L+K+ E+
Sbjct: 1062 LEGDLKLAQESTMDVENDKQQLDEKLKKKEFEMSNLQSKIEDEQALGMQLQKKIKELQAR 1121
Query: 814 IEELEAAIQ-DNISQANSIFFLNQNILQEYEHRQRQIED----------LSTKQEADKKE 862
IEELE I+ + S+A + ++ +E E ++E+ ++ K+EA+ ++
Sbjct: 1122 IEELEEEIEAERASRAKAEK-QRSDLSRELEEISERLEEAGGATSAQIEMNKKREAEFQK 1180
Query: 863 LKRFLAEIDALKEKWLPTLR----NLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFG 918
++R L E E TLR + VA++ E N Q + E E + + D
Sbjct: 1181 MRRDLEEATLQHEATAATLRKKHADSVAELGEQID-NLQRVKQKLEKEKSEMKMEIDDLA 1239
Query: 919 ILIKVKFRQSGQLE 932
++V + G LE
Sbjct: 1240 SNMEVISKSKGNLE 1253
Score = 46 (21.3 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 10/14 (71%), Positives = 12/14 (85%)
Query: 389 LQKSEKEKILNQNK 402
L+KSEKE+I QNK
Sbjct: 17 LRKSEKERIEAQNK 30
>UNIPROTKB|F1LRV9 [details] [associations]
symbol:Myh4 "Myosin-4" species:10116 "Rattus norvegicus"
[GO:0003774 "motor activity" evidence=IEA] [GO:0003779 "actin
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005859 "muscle myosin
complex" evidence=IEA] [GO:0005925 "focal adhesion" evidence=IEA]
[GO:0014704 "intercalated disc" evidence=IEA] [GO:0031672 "A band"
evidence=IEA] InterPro:IPR000048 InterPro:IPR001609
InterPro:IPR002928 InterPro:IPR004009 Pfam:PF00063 Pfam:PF01576
Pfam:PF02736 PRINTS:PR00193 PROSITE:PS50096 SMART:SM00015
SMART:SM00242 RGD:3139 GO:GO:0005524 GO:GO:0003774 GO:GO:0016459
KO:K10352 InterPro:IPR015650 PANTHER:PTHR13140:SF22 CTD:4619
OMA:QPTEEIS IPI:IPI00780102 RefSeq:NP_001128630.1 UniGene:Rn.224800
ProteinModelPortal:F1LRV9 PRIDE:F1LRV9 Ensembl:ENSRNOT00000004295
GeneID:287408 KEGG:rno:287408 NextBio:626038 ArrayExpress:F1LRV9
Uniprot:F1LRV9
Length = 1942
Score = 146 (56.5 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 69/314 (21%), Positives = 147/314 (46%)
Query: 643 MQTEQRLIEDEAAKLQKEREEI-INIVQIEKRKRREMENHINLRKRKLESIEKEDDINTA 701
+ ++R +EDE ++L+K+ +++ + + ++EK K EN + ++ +++ T
Sbjct: 943 LTAKKRKLEDECSELKKDIDDLELTLAKVEKEKHAT-ENKVKNLTEEMAGLDETIAKLTK 1001
Query: 702 LAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIR-ELEFNLKQ 760
K + +A + + + N L + + S+E + KIR +LE ++
Sbjct: 1002 EKKALQEAHQQTLDDLQAEEDKVNTLTKAKIKLEQQVDDLEGSLEQEKKIRMDLERAKRK 1061
Query: 761 HE---KLALQASLHYEDCKKEV-EHCRK---HLSDAKRQAESIAFITPELEKEFLEMPTT 813
E KLA ++++ E+ K+++ E +K +S+ + + E + +L+K+ E+
Sbjct: 1062 LEGDLKLAQESTMDVENDKQQLDEKLKKKEFEMSNLQSKIEDEQALGMQLQKKIKELQAR 1121
Query: 814 IEELEAAIQ-DNISQANSIFFLNQNILQEYEHRQRQIED----------LSTKQEADKKE 862
IEELE I+ + S+A + ++ +E E ++E+ ++ K+EA+ ++
Sbjct: 1122 IEELEEEIEAERASRAKAEK-QRSDLSRELEEISERLEEAGGATSAQIEMNKKREAEFQK 1180
Query: 863 LKRFLAEIDALKEKWLPTLR----NLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFG 918
++R L E E TLR + VA++ E N Q + E E + + D
Sbjct: 1181 MRRDLEEATLQHEATAATLRKKHADSVAELGEQID-NLQRVKQKLEKEKSEMKMEIDDLA 1239
Query: 919 ILIKVKFRQSGQLE 932
++V + G LE
Sbjct: 1240 SNMEVISKSKGNLE 1253
Score = 46 (21.3 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 10/14 (71%), Positives = 12/14 (85%)
Query: 389 LQKSEKEKILNQNK 402
L+KSEKE+I QNK
Sbjct: 17 LRKSEKERIEAQNK 30
>UNIPROTKB|Q6UWE0 [details] [associations]
symbol:LRSAM1 "E3 ubiquitin-protein ligase LRSAM1"
species:9606 "Homo sapiens" [GO:0005179 "hormone activity"
evidence=IEA] [GO:0005576 "extracellular region" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0070086 "ubiquitin-dependent endocytosis" evidence=IDA]
[GO:0044425 "membrane part" evidence=IDA] [GO:0051865 "protein
autoubiquitination" evidence=IDA] [GO:0045806 "negative regulation
of endocytosis" evidence=IMP] [GO:0046755 "non-lytic virus budding"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0000209 "protein polyubiquitination" evidence=IDA] [GO:0030163
"protein catabolic process" evidence=IMP] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA]
InterPro:IPR001841 InterPro:IPR001611 InterPro:IPR001660
InterPro:IPR011510 InterPro:IPR016179 Pfam:PF07647 PROSITE:PS50089
PROSITE:PS50105 PROSITE:PS51450 SMART:SM00078 SMART:SM00184
SMART:SM00454 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005737
Reactome:REACT_6900 GO:GO:0005576 GO:GO:0046872 GO:GO:0015031
GO:GO:0008270 eggNOG:COG4886 GO:GO:0030163 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GO:GO:0070086 GO:GO:0000209
InterPro:IPR025875 Pfam:PF12799 GO:GO:0051865 EMBL:AL445222
GO:GO:0045806 EMBL:AY358830 EMBL:AK056203 EMBL:AK056305
EMBL:AK091589 EMBL:BC009239 IPI:IPI00289113 IPI:IPI00300805
IPI:IPI00550437 RefSeq:NP_001005373.1 RefSeq:NP_001005374.1
RefSeq:NP_001177652.1 RefSeq:NP_612370.3 UniGene:Hs.495188
ProteinModelPortal:Q6UWE0 SMR:Q6UWE0 IntAct:Q6UWE0
MINT:MINT-1377718 STRING:Q6UWE0 PhosphoSite:Q6UWE0 DMDM:62511890
PaxDb:Q6UWE0 PRIDE:Q6UWE0 Ensembl:ENST00000300417
Ensembl:ENST00000323301 Ensembl:ENST00000373322
Ensembl:ENST00000373324 GeneID:90678 KEGG:hsa:90678 UCSC:uc004brb.2
UCSC:uc004bre.2 UCSC:uc010mxk.2 CTD:90678 GeneCards:GC09P130215
HGNC:HGNC:25135 HPA:HPA021403 HPA:HPA021844 MIM:610933 MIM:614436
neXtProt:NX_Q6UWE0 Orphanet:300319 PharmGKB:PA134890010
HOGENOM:HOG000231972 HOVERGEN:HBG052363 InParanoid:Q6UWE0 KO:K10641
OMA:FGAFATC PhylomeDB:Q6UWE0 ChiTaRS:LRSAM1 GenomeRNAi:90678
NextBio:76927 Bgee:Q6UWE0 CleanEx:HS_LRSAM1 Genevestigator:Q6UWE0
GermOnline:ENSG00000148356 GO:GO:0044425 GO:GO:0046755
Uniprot:Q6UWE0
Length = 723
Score = 119 (46.9 bits), Expect = 7.8e-05, Sum P(3) = 7.8e-05
Identities = 68/301 (22%), Positives = 139/301 (46%)
Query: 647 QRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLV 706
Q+L++D + QK+ EI+ ++ E R ME +++ + + ES+ + D + +A+ +++
Sbjct: 340 QKLLQDN--QRQKKSSEILKSLENE---RIRMEQLMSITQEETESLRRRD-VASAMQQML 393
Query: 707 DQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLKQHEKLAL 766
++ + Q Y + +NL+ + S E+ + + + + E
Sbjct: 394 TESCKNRLIQMAYESQRQNLVQQACSSMAEMDERFQQILSWQQMDQNKAISQILQESAMQ 453
Query: 767 QASLHYEDCKKEVEHCRKHLSDAKR-QAESIAFITPELEKEFLEMPTTIEELEAAIQDNI 825
+A+ KK++ H R+ S K + E + EL+++ L+ E L+ I +
Sbjct: 454 KAAFEALQVKKDLMH-RQIRSQIKLIETELLQLTQLELKRKSLDT----ESLQEMISE-- 506
Query: 826 SQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKR---FLAEIDAL-KEKWLPTL 881
Q ++ L Q +L+E + R+ ++ ++ T+ EA K E ++ +L + L +K L
Sbjct: 507 -QRWALSSLLQQLLKEKQQREEELREILTELEA-KSETRQENYWLIQYQRLLNQKPLSLK 564
Query: 882 -------RNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSG-QLEV 933
R LVA + E + ++ + +SLD S G L KV ++G Q E+
Sbjct: 565 LQEEGMERQLVALLEELSAEHYLPIFAHHRLSLDLL-SQMSP-GDLAKVGVSEAGLQHEI 622
Query: 934 L 934
L
Sbjct: 623 L 623
Score = 61 (26.5 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 28/103 (27%), Positives = 50/103 (48%)
Query: 152 QDRVCEFAKLSPVKLLE--ETEKAVGDPQLPVQHCALVEKSSKLKT-IECTVKRNGDTLN 208
Q+R ++ K K+LE E E+ + Q +H L+++SS K I TVK L
Sbjct: 250 QNRFSDYEKRKEQKMLEKLEFERRLELGQR--EHTQLLQQSSSQKDEILQTVKEEQSRLE 307
Query: 209 QLKALNVEQEK-DVERVRQRAELLEKVESMKKKLPWLKYDMKK 250
Q L+ Q + ER R + +L + +++ ++ L D ++
Sbjct: 308 Q--GLSEHQRHLNAERQRLQEQLKQTEQNISSRIQKLLQDNQR 348
Score = 60 (26.2 bits), Expect = 7.8e-05, Sum P(3) = 7.8e-05
Identities = 23/84 (27%), Positives = 40/84 (47%)
Query: 141 IQVNNLTQFLPQDRVCEFAKLSPVKLLEETEK---AVGDP--QLPVQHCALVEKSSKLKT 195
+ N+LT LP+ C L+ +K+L+ + A+ D QL VE++ ++
Sbjct: 62 VHTNHLTSLLPKS--CSLLSLATIKVLDLHDNQLTALPDDLGQLTALQVLNVERNQLMQ- 118
Query: 196 IECTVKRNGDTLNQLKALNVEQEK 219
+ R+ L QL+ LNV+ K
Sbjct: 119 ----LPRSIGNLTQLQTLNVKDNK 138
Score = 48 (22.0 bits), Expect = 7.8e-05, Sum P(3) = 7.8e-05
Identities = 18/66 (27%), Positives = 36/66 (54%)
Query: 370 IEKLG-SQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRN 428
+EKL + LELG + + + LQ+S +K ++ T+++ RL+ ++ + L+A R
Sbjct: 265 LEKLEFERRLELGQREHTQLLQQSSSQK--DEILQTVKEEQSRLEQGLSEHQRHLNAERQ 322
Query: 429 SGAENI 434
E +
Sbjct: 323 RLQEQL 328
Score = 44 (20.5 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 11/37 (29%), Positives = 22/37 (59%)
Query: 371 EKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQ 407
+ + S+I +L +Q NQ++ + SE K L ++ + Q
Sbjct: 333 QNISSRIQKL-LQDNQRQKKSSEILKSLENERIRMEQ 368
>WB|WBGene00001086 [details] [associations]
symbol:dpy-27 species:6239 "Caenorhabditis elegans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005694 "chromosome"
evidence=IEA] [GO:0051276 "chromosome organization" evidence=IEA]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0010171 "body
morphogenesis" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0018991 "oviposition"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0016358 "dendrite development" evidence=IMP]
[GO:0042464 "dosage compensation by hypoactivation of X chromosome"
evidence=IMP] [GO:0005634 "nucleus" evidence=IDA] [GO:0000228
"nuclear chromosome" evidence=IDA] [GO:0000805 "X chromosome"
evidence=IDA] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0046536 "dosage compensation complex"
evidence=IPI] InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0009792 GO:GO:0040007 GO:GO:0018991
GO:GO:0040010 GO:GO:0002119 GO:GO:0043565 GO:GO:0006281
GO:GO:0016358 GO:GO:0010171 GO:GO:0040011 GO:GO:0006310
GO:GO:0030261 EMBL:Z35602 GO:GO:0000228 GO:GO:0000805 GO:GO:0042464
GO:GO:0007062 EMBL:L35274 PIR:T24216 RefSeq:NP_497771.1
ProteinModelPortal:P48996 SMR:P48996 IntAct:P48996 STRING:P48996
PaxDb:P48996 PRIDE:P48996 EnsemblMetazoa:R13G10.1 GeneID:175492
KEGG:cel:CELE_R13G10.1 UCSC:R13G10.1 CTD:175492 WormBase:R13G10.1
eggNOG:COG1196 GeneTree:ENSGT00580000081617 HOGENOM:HOG000021811
InParanoid:P48996 KO:K06675 OMA:FHKNLTM NextBio:888386
GO:GO:0046536 SUPFAM:SSF75553 Uniprot:P48996
Length = 1469
Score = 95 (38.5 bits), Expect = 8.1e-05, Sum P(3) = 8.1e-05
Identities = 41/158 (25%), Positives = 70/158 (44%)
Query: 23 IIEIELHNFMTF--DHLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI 80
I+ I + NF ++ H++ L +++GPNGSGKS+++ A+ G + R +
Sbjct: 93 ILNIYVENFKSYAGKHILGPFHKNLTMILGPNGSGKSNVIDALLFVFGFKAGKI-RTKKL 151
Query: 81 GAYVKRGE--ESGYIKISLR--GDT------KEEHLT-----IMRKIDTRNKSEWFFNGK 125
A + G ES + I + D K E LT I R I+ N S++ + K
Sbjct: 152 SALINSGGNYESCSVTIMFQMVKDMPVENYDKYEVLTDNCVCITRTINRENNSKYRIDDK 211
Query: 126 VVPKGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSP 163
+ +V E+ R I + + + Q V A + P
Sbjct: 212 DASQKDVQELLLRAGIDMTHNRFLILQGEVEAIALMKP 249
Score = 91 (37.1 bits), Expect = 8.1e-05, Sum P(3) = 8.1e-05
Identities = 85/382 (22%), Positives = 163/382 (42%)
Query: 644 QTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLR-KRKLESIEKEDDINT-A 701
Q E++L E E L+K R E + Q+E + + + IN + + SI+ + T A
Sbjct: 948 QAEKKLSELEHMCLEK-RSEADALAQLEVGEDVKGIDIINAQLQTSTASIDAQRARYTEA 1006
Query: 702 LA--KLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLK 759
+A + D A + + + + L+ I+ K MA +A++ +E
Sbjct: 1007 VAARREADAAYQTTVDNYNMVKQTYDELMRIID---DLENKTMAD---NAELDIIESAWM 1060
Query: 760 QHEKLALQAS-LHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELE 818
Q EKL + Y D + H+ E I+ I P E EE E
Sbjct: 1061 QPEKLYPPGKFVRYNDPDIAAKMTDGHVV---LPYECISMIEPHRE--------AYEEHE 1109
Query: 819 AA-IQDNISQ--ANSIFFLNQNI---LQEYEHRQ-RQIEDLSTKQEADKKELKRFLAEID 871
A ++D++ + AN I L +++ +E++++ R + + + K+F ++
Sbjct: 1110 ARMLEDDVFEDTANKICKLEKDVDKFRREFDNKGVRDYAMIVSLLMNEVTSAKKFSDKLK 1169
Query: 872 ALKEKWLPTLRNLVAQINE----------TFSRNFQEMAVAGEVSLD--EHESDFDKFGI 919
A +EK L LR +A+ NE T +Q + G+ SL E D F
Sbjct: 1170 AHREK-LNELR--MARFNEFSEALAFLGTTTQMLYQLITNGGDASLKFVEEGKSTDPFDG 1226
Query: 920 LIKVKFRQSGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINER 979
IK R + + L + SGGE++++++ ++ ++ P V+DEI+ +D +N
Sbjct: 1227 GIKFSVRPAKKSWKL-IENLSGGEKTLASLCFVFAMHHYRPTPLYVMDEIDAALD-LNNV 1284
Query: 980 KMFQQLVRAASQPNTPQCFLLT 1001
+ ++ + + Q +++
Sbjct: 1285 SLIANYIKHSERTRNAQFIIIS 1306
Score = 52 (23.4 bits), Expect = 8.1e-05, Sum P(3) = 8.1e-05
Identities = 30/146 (20%), Positives = 62/146 (42%)
Query: 296 KKLSSLINENSKRRMDFLEKVDQGVQVQGKYKXXXXXXXXXXXXXXXILKARXXXXXXXX 355
+ L+S++ E +R+D+ K + K K ++K R
Sbjct: 379 RSLNSIVTELENKRIDWQSKKNDWHARDAKRKQGLKSCTQDLGK---LMKERDEARREKF 435
Query: 356 XXQTVPAYEPPHDKIEKLGSQILELGVQANQKRL-QKSEKEKILNQNKLTLRQCSDRLK- 413
+T P + +I K Q LE Q+ + Q++ E ++ ++ + +DR K
Sbjct: 436 EIETAPE----NARISKQNMQ-LEWDQLKEQENVCQRTATENLIKYDQ---KSSADRAKH 487
Query: 414 -DMEDK-NNKLLHALRNSGAENIFEA 437
D+E K +++LL ++R ++ E+
Sbjct: 488 DDLEKKLSDELLQSMRAKAELDVSES 513
Score = 44 (20.5 bits), Expect = 0.00050, Sum P(3) = 0.00050
Identities = 17/96 (17%), Positives = 48/96 (50%)
Query: 368 DKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALR 427
++ +K ++I + ++ ++++ + E ++ +NK ++ Q DR+ +E + +
Sbjct: 883 EESQKSSAKIKQQ-IEQYKRKMDRMFME-LVQKNKDSIEQAKDRMGQLEQDIARQTAIIE 940
Query: 428 NSGAENIFEAYCWLQQHRHE-LNKEAYGPVLLEVNV 462
N+ + ++ +A L + H L K + L ++ V
Sbjct: 941 NNPS-HLEQAEKKLSELEHMCLEKRSEADALAQLEV 975
>UNIPROTKB|P48996 [details] [associations]
symbol:dpy-27 "Chromosome condensation protein dpy-27"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0009792 GO:GO:0040007 GO:GO:0018991
GO:GO:0040010 GO:GO:0002119 GO:GO:0043565 GO:GO:0006281
GO:GO:0016358 GO:GO:0010171 GO:GO:0040011 GO:GO:0006310
GO:GO:0030261 EMBL:Z35602 GO:GO:0000228 GO:GO:0000805 GO:GO:0042464
GO:GO:0007062 EMBL:L35274 PIR:T24216 RefSeq:NP_497771.1
ProteinModelPortal:P48996 SMR:P48996 IntAct:P48996 STRING:P48996
PaxDb:P48996 PRIDE:P48996 EnsemblMetazoa:R13G10.1 GeneID:175492
KEGG:cel:CELE_R13G10.1 UCSC:R13G10.1 CTD:175492 WormBase:R13G10.1
eggNOG:COG1196 GeneTree:ENSGT00580000081617 HOGENOM:HOG000021811
InParanoid:P48996 KO:K06675 OMA:FHKNLTM NextBio:888386
GO:GO:0046536 SUPFAM:SSF75553 Uniprot:P48996
Length = 1469
Score = 95 (38.5 bits), Expect = 8.1e-05, Sum P(3) = 8.1e-05
Identities = 41/158 (25%), Positives = 70/158 (44%)
Query: 23 IIEIELHNFMTF--DHLICKPGSRLNLVIGPNGSGKSSLVCAIALALGGDTQLLGRATSI 80
I+ I + NF ++ H++ L +++GPNGSGKS+++ A+ G + R +
Sbjct: 93 ILNIYVENFKSYAGKHILGPFHKNLTMILGPNGSGKSNVIDALLFVFGFKAGKI-RTKKL 151
Query: 81 GAYVKRGE--ESGYIKISLR--GDT------KEEHLT-----IMRKIDTRNKSEWFFNGK 125
A + G ES + I + D K E LT I R I+ N S++ + K
Sbjct: 152 SALINSGGNYESCSVTIMFQMVKDMPVENYDKYEVLTDNCVCITRTINRENNSKYRIDDK 211
Query: 126 VVPKGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSP 163
+ +V E+ R I + + + Q V A + P
Sbjct: 212 DASQKDVQELLLRAGIDMTHNRFLILQGEVEAIALMKP 249
Score = 91 (37.1 bits), Expect = 8.1e-05, Sum P(3) = 8.1e-05
Identities = 85/382 (22%), Positives = 163/382 (42%)
Query: 644 QTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLR-KRKLESIEKEDDINT-A 701
Q E++L E E L+K R E + Q+E + + + IN + + SI+ + T A
Sbjct: 948 QAEKKLSELEHMCLEK-RSEADALAQLEVGEDVKGIDIINAQLQTSTASIDAQRARYTEA 1006
Query: 702 LA--KLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFNLK 759
+A + D A + + + + L+ I+ K MA +A++ +E
Sbjct: 1007 VAARREADAAYQTTVDNYNMVKQTYDELMRIID---DLENKTMAD---NAELDIIESAWM 1060
Query: 760 QHEKLALQAS-LHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELE 818
Q EKL + Y D + H+ E I+ I P E EE E
Sbjct: 1061 QPEKLYPPGKFVRYNDPDIAAKMTDGHVV---LPYECISMIEPHRE--------AYEEHE 1109
Query: 819 AA-IQDNISQ--ANSIFFLNQNI---LQEYEHRQ-RQIEDLSTKQEADKKELKRFLAEID 871
A ++D++ + AN I L +++ +E++++ R + + + K+F ++
Sbjct: 1110 ARMLEDDVFEDTANKICKLEKDVDKFRREFDNKGVRDYAMIVSLLMNEVTSAKKFSDKLK 1169
Query: 872 ALKEKWLPTLRNLVAQINE----------TFSRNFQEMAVAGEVSLD--EHESDFDKFGI 919
A +EK L LR +A+ NE T +Q + G+ SL E D F
Sbjct: 1170 AHREK-LNELR--MARFNEFSEALAFLGTTTQMLYQLITNGGDASLKFVEEGKSTDPFDG 1226
Query: 920 LIKVKFRQSGQLEVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINER 979
IK R + + L + SGGE++++++ ++ ++ P V+DEI+ +D +N
Sbjct: 1227 GIKFSVRPAKKSWKL-IENLSGGEKTLASLCFVFAMHHYRPTPLYVMDEIDAALD-LNNV 1284
Query: 980 KMFQQLVRAASQPNTPQCFLLT 1001
+ ++ + + Q +++
Sbjct: 1285 SLIANYIKHSERTRNAQFIIIS 1306
Score = 52 (23.4 bits), Expect = 8.1e-05, Sum P(3) = 8.1e-05
Identities = 30/146 (20%), Positives = 62/146 (42%)
Query: 296 KKLSSLINENSKRRMDFLEKVDQGVQVQGKYKXXXXXXXXXXXXXXXILKARXXXXXXXX 355
+ L+S++ E +R+D+ K + K K ++K R
Sbjct: 379 RSLNSIVTELENKRIDWQSKKNDWHARDAKRKQGLKSCTQDLGK---LMKERDEARREKF 435
Query: 356 XXQTVPAYEPPHDKIEKLGSQILELGVQANQKRL-QKSEKEKILNQNKLTLRQCSDRLK- 413
+T P + +I K Q LE Q+ + Q++ E ++ ++ + +DR K
Sbjct: 436 EIETAPE----NARISKQNMQ-LEWDQLKEQENVCQRTATENLIKYDQ---KSSADRAKH 487
Query: 414 -DMEDK-NNKLLHALRNSGAENIFEA 437
D+E K +++LL ++R ++ E+
Sbjct: 488 DDLEKKLSDELLQSMRAKAELDVSES 513
Score = 44 (20.5 bits), Expect = 0.00050, Sum P(3) = 0.00050
Identities = 17/96 (17%), Positives = 48/96 (50%)
Query: 368 DKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALR 427
++ +K ++I + ++ ++++ + E ++ +NK ++ Q DR+ +E + +
Sbjct: 883 EESQKSSAKIKQQ-IEQYKRKMDRMFME-LVQKNKDSIEQAKDRMGQLEQDIARQTAIIE 940
Query: 428 NSGAENIFEAYCWLQQHRHE-LNKEAYGPVLLEVNV 462
N+ + ++ +A L + H L K + L ++ V
Sbjct: 941 NNPS-HLEQAEKKLSELEHMCLEKRSEADALAQLEV 975
>UNIPROTKB|Q15643 [details] [associations]
symbol:TRIP11 "Thyroid receptor-interacting protein 11"
species:9606 "Homo sapiens" [GO:0000042 "protein targeting to
Golgi" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0003713 "transcription coactivator
activity" evidence=TAS] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=IDA] InterPro:IPR000237 PROSITE:PS50913 GO:GO:0005634
GO:GO:0005794 GO:GO:0016020 GO:GO:0005856 GO:GO:0003713
GO:GO:0006366 eggNOG:NOG12793 EMBL:AL049872 GO:GO:0000042
EMBL:AF007217 EMBL:Y12490 EMBL:AF011368 EMBL:L40380 IPI:IPI00003515
PIR:T03719 RefSeq:NP_004230.2 UniGene:Hs.632339 UniGene:Hs.741740
ProteinModelPortal:Q15643 DIP:DIP-40357N IntAct:Q15643
MINT:MINT-2866314 STRING:Q15643 PhosphoSite:Q15643 DMDM:292495059
PaxDb:Q15643 PRIDE:Q15643 Ensembl:ENST00000267622 GeneID:9321
KEGG:hsa:9321 UCSC:uc001xzy.3 CTD:9321 GeneCards:GC14M092435
H-InvDB:HIX0202079 HGNC:HGNC:12305 HPA:HPA002570 MIM:200600
MIM:604505 neXtProt:NX_Q15643 Orphanet:93299 PharmGKB:PA36984
HOGENOM:HOG000168282 HOVERGEN:HBG079281 InParanoid:Q15643
OMA:IEAELCW OrthoDB:EOG4229HV PhylomeDB:Q15643 GenomeRNAi:9321
NextBio:34917 ArrayExpress:Q15643 Bgee:Q15643 CleanEx:HS_TRIP11
Genevestigator:Q15643 GermOnline:ENSG00000100815 Uniprot:Q15643
Length = 1979
Score = 126 (49.4 bits), Expect = 8.2e-05, Sum P(3) = 8.2e-05
Identities = 50/259 (19%), Positives = 122/259 (47%)
Query: 650 IEDEAAKLQKEREEIINIVQIEKRKRREMENHIN-LRKRKLESIEKEDDINTALAKLVD- 707
++++ Q+ER++++ ++ ++ + ++N + LR ++ S ++ + + L + D
Sbjct: 1535 MQEKTVVFQQERDQVMLALKQKQMENTALQNEVQRLRDKEFRSNQELERLRNHLLESEDS 1594
Query: 708 ---QAADLNIQQFKYAIEIKNLLVEIVSCKWSYAE-KHMASIEFDAKIRELEFNLKQHEK 763
+A ++ K ++ L ++VS + H AS++ ++ +L KQ ++
Sbjct: 1595 YTREALAAEDREAKLRKKVTVLEEKLVSSSNAMENASHQASVQVESLQEQLNVVSKQRDE 1654
Query: 764 LALQASLHYEDCKK-EVEHCRKHLSDAKRQAESIAFITPELEKE---FLEMPTTIEELEA 819
ALQ S+ E K+ + + Q E A + ELEK+ E E LE
Sbjct: 1655 TALQLSVSQEQVKQYALSLANLQMVLEHFQQEEKAMYSAELEKQKQLIAEWKKNAENLEG 1714
Query: 820 ---AIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEK 876
++Q+ + +AN+ + ++ + ++ QIE+L + E ++E+ +D +++K
Sbjct: 1715 KVISLQECLDEANAALDSASRLTEQLDVKEEQIEELKRQNEL-RQEM------LDDVQKK 1767
Query: 877 WLPTLRNLVAQINETFSRN 895
+ + ++++ RN
Sbjct: 1768 LMSLANSSEGKVDKVLMRN 1786
Score = 67 (28.6 bits), Expect = 8.2e-05, Sum P(3) = 8.2e-05
Identities = 39/171 (22%), Positives = 79/171 (46%)
Query: 99 GDTKEEHLTIMRKIDTRNKSEWFFNGKVV-PK--GEVLEITKRFNIQVNNLTQFLPQD-- 153
G KEE+ + +++ R + E V PK V E+ + Q+N + + L ++
Sbjct: 856 GSMKEENNHLQEELE-RLREEQSRTAPVADPKTLDSVTELASEVS-QLNTIKEHLEEEIK 913
Query: 154 ---RVCEFAKLSPVKLLE---ETEKAVGD-----PQLPVQHCAL-VEKSSKLKTIECTVK 201
++ E S ++LL+ E +K + + Q+ H L +EK ++K+++ T++
Sbjct: 914 HHQKIIEDQNQSKMQLLQSLQEQKKEMDEFRYQHEQMNATHTQLFLEKDEEIKSLQKTIE 973
Query: 202 RNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAE 252
Q+K E+ +D++ KV+S+ + K+D+ KAE
Sbjct: 974 -------QIKTQLHEERQDIQTDNSDIFQETKVQSLNIENGSEKHDLSKAE 1017
Score = 66 (28.3 bits), Expect = 8.4e-05, Sum P(2) = 8.4e-05
Identities = 25/110 (22%), Positives = 57/110 (51%)
Query: 142 QVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVK 201
Q+++ + PQ C A S V L E+ + + +L +L EK + ++T++
Sbjct: 1315 QLSSASLLTPQSAECLRASKSEV--LSESSELL-QQELEELRKSLQEKDATIRTLQENNH 1371
Query: 202 RNGDTL---NQLKALNVEQ-EKDVERVRQRAELLEKVESMKKKLPWLKYD 247
R D++ ++L+ EQ + ++++++++ ++L+K+ K L K D
Sbjct: 1372 RLSDSIAATSELERKEHEQTDSEIKQLKEKQDVLQKLLKEKDLLIKAKSD 1421
Score = 64 (27.6 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 47/195 (24%), Positives = 83/195 (42%)
Query: 369 KIEKLGSQILELGVQANQKRLQKSEKEKIL---NQNKLT--LRQCSDRLKDMEDKNNKLL 423
+I KL + I EL +Q+ + +L +Q KLT R+ + L D E++ +L
Sbjct: 210 EICKLQNIIKELKQNRSQEIDDHQHEMSVLQNAHQQKLTEISRRHREELSDYEERIEELE 269
Query: 424 HALRNSGAENIFEAYCWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLEDHVGHYIWKSF 483
+ L+ G+ + E +E+ K VL V + LED + K
Sbjct: 270 NLLQQGGS-GVIETDL---SKIYEMQKTIQ--VLQIEKVESTKKMEQLEDKIKDINKK-- 321
Query: 484 ITQDAGDRDFLAKNLKPFDVP---ILNYVSN---ESSRKEPFQI------SEEMRALGIS 531
++ DRD L + + +V I+ N E S+ +P + +E+ R L S
Sbjct: 322 LSSAENDRDILRREQEQLNVEKRQIMEECENLKLECSKLQPSAVKQSDTMTEKERILAQS 381
Query: 532 ARLDQVFDAPHAVKE 546
A +++VF A+ +
Sbjct: 382 ASVEEVFRLQQALSD 396
Score = 56 (24.8 bits), Expect = 0.00063, Sum P(3) = 0.00063
Identities = 32/132 (24%), Positives = 68/132 (51%)
Query: 379 ELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNKLLHALRNSGAENIFEAY 438
EL VQ +K +Q E LN LT ++ D+++++ D+ NK + + EN+ E
Sbjct: 556 ELDVQ-KEKLIQS---EVALNDLHLTKQKLEDKVENLVDQLNKSQESNVSIQKENL-ELK 610
Query: 439 CWLQQHRHELNKEAYGPVLLEVNVSNRAHANYLEDHVGHYIWK-SFITQDAGDRDFLAKN 497
++Q+ EL++ L++ +++ +++N+ + + + + Q+ + + L +N
Sbjct: 611 EHIRQNEEELSR--IRNELMQ-SLNQDSNSNFKDTLLKEREAEVRNLKQNLSELEQLNEN 667
Query: 498 LKP--FDVPILN 507
LK FDV + N
Sbjct: 668 LKKVAFDVKMEN 679
Score = 50 (22.7 bits), Expect = 0.00063, Sum P(3) = 0.00063
Identities = 39/192 (20%), Positives = 78/192 (40%)
Query: 102 KEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVNNLTQFLPQDRVCEFAKL 161
K E M +++ + K N K+ +I +R Q+N + + ++ CE KL
Sbjct: 301 KVESTKKMEQLEDKIKD---INKKLSSAENDRDILRREQEQLNVEKRQIMEE--CENLKL 355
Query: 162 SPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQ---LKALNVEQE 218
KL AV + ++ +S+ ++ + + D N+ L +LN +
Sbjct: 356 ECSKL---QPSAVKQSDTMTEKERILAQSASVEEVFRLQQALSDAENEIMRLSSLNQDNS 412
Query: 219 --KDVERVRQRAELLEKVESM-KKKLPWLKYDMKKAEYIXXXXXXXXXXXXXXXXXNTLH 275
+D +++ R E+LEK +S+ ++ L+ + K + LH
Sbjct: 413 LAEDNLKLKMRIEVLEKEKSLLSQEKEELQMSLLKLN--NEYEVIKSTATRDISLDSELH 470
Query: 276 EFSKPIEGKKQE 287
+ +E K+QE
Sbjct: 471 DLRLNLEAKEQE 482
Score = 48 (22.0 bits), Expect = 8.2e-05, Sum P(3) = 8.2e-05
Identities = 41/153 (26%), Positives = 65/153 (42%)
Query: 360 VPAYEPPHDKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKN 419
+ +YE K++ G ++ + VQ + +L + K+ +L KL + S +L
Sbjct: 1271 IQSYEQNETKLKNFGQELAQ--VQHSIGQLCNT-KDLLLG--KLDI--ISPQLSSASLLT 1323
Query: 420 NKLLHALRNSGAENIFEAYCWLQQHRHELNK-----EAYGPVLLEVN--VSNRAHANYLE 472
+ LR S +E + E+ LQQ EL K +A L E N +S+ A
Sbjct: 1324 PQSAECLRASKSEVLSESSELLQQELEELRKSLQEKDATIRTLQENNHRLSDSIAATSEL 1383
Query: 473 DHVGHYIWKSFITQDAGDRDFLAKNLKPFDVPI 505
+ H S I Q +D L K LK D+ I
Sbjct: 1384 ERKEHEQTDSEIKQLKEKQDVLQKLLKEKDLLI 1416
Score = 48 (22.0 bits), Expect = 0.00099, Sum P(3) = 0.00099
Identities = 10/31 (32%), Positives = 19/31 (61%)
Query: 211 KALNVEQEKDVERVRQRAELLEKVESMKKKL 241
K + V Q + VE ++ +L +K++ + KKL
Sbjct: 292 KTIQVLQIEKVESTKKMEQLEDKIKDINKKL 322
>UNIPROTKB|Q3V6T2 [details] [associations]
symbol:CCDC88A "Girdin" species:9606 "Homo sapiens"
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] [GO:0016023
"cytoplasmic membrane-bounded vesicle" evidence=IEA] [GO:0031410
"cytoplasmic vesicle" evidence=IDA] [GO:0016477 "cell migration"
evidence=IMP] [GO:0035091 "phosphatidylinositol binding"
evidence=IDA] [GO:0042127 "regulation of cell proliferation"
evidence=ISS] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0016020 "membrane" evidence=IDA]
[GO:0016044 "cellular membrane organization" evidence=IDA]
[GO:0043422 "protein kinase B binding" evidence=IPI] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0003779
"actin binding" evidence=IDA] [GO:0030027 "lamellipodium"
evidence=IDA] [GO:0030032 "lamellipodium assembly" evidence=IMP]
[GO:0032956 "regulation of actin cytoskeleton organization"
evidence=IMP] [GO:0001932 "regulation of protein phosphorylation"
evidence=ISS] [GO:0006275 "regulation of DNA replication"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0032148 "activation of protein kinase B activity" evidence=ISS]
[GO:0005829 "cytosol" evidence=IDA] [GO:0031929 "TOR signaling
cascade" evidence=ISS] [GO:0010975 "regulation of neuron projection
development" evidence=ISS] InterPro:IPR008636 Pfam:PF05622
GO:GO:0005783 GO:GO:0005829 GO:GO:0005886 GO:GO:0005794
GO:GO:0005737 GO:GO:0003779 GO:GO:0000226 GO:GO:0016477
GO:GO:0006275 GO:GO:0031929 GO:GO:0006260 GO:GO:0031410
GO:GO:0030027 GO:GO:0016023 GO:GO:0042127 GO:GO:0032148
eggNOG:NOG12793 GO:GO:0035091 GO:GO:0032956 GO:GO:0030032
GO:GO:0008017 GO:GO:0010975 GO:GO:0016044 HOVERGEN:HBG057867
EMBL:AB201172 EMBL:AB125644 EMBL:AC019198 EMBL:AC092176
EMBL:AC012358 EMBL:BC132736 EMBL:BC144320 EMBL:BX537985
EMBL:BX538154 EMBL:BX648138 IPI:IPI00171134 IPI:IPI00654603
IPI:IPI00892916 IPI:IPI00893288 IPI:IPI00943263
RefSeq:NP_001129069.1 RefSeq:NP_001241872.1 RefSeq:NP_060554.3
UniGene:Hs.292925 ProteinModelPortal:Q3V6T2 SMR:Q3V6T2
IntAct:Q3V6T2 STRING:Q3V6T2 PhosphoSite:Q3V6T2 DMDM:147644956
PaxDb:Q3V6T2 PRIDE:Q3V6T2 Ensembl:ENST00000263630
Ensembl:ENST00000336838 Ensembl:ENST00000413716
Ensembl:ENST00000436346 GeneID:55704 KEGG:hsa:55704 UCSC:uc002ryu.2
UCSC:uc002ryv.2 UCSC:uc002ryw.3 UCSC:uc010yoz.1 CTD:55704
GeneCards:GC02M055514 HGNC:HGNC:25523 HPA:HPA038101 MIM:609736
neXtProt:NX_Q3V6T2 PharmGKB:PA162381751 InParanoid:Q3V6T2
OMA:TGFRSKQ ChiTaRS:CCDC88A GenomeRNAi:55704 NextBio:60553
ArrayExpress:Q3V6T2 Bgee:Q3V6T2 CleanEx:HS_CCDC88A
Genevestigator:Q3V6T2 Uniprot:Q3V6T2
Length = 1871
Score = 101 (40.6 bits), Expect = 8.4e-05, Sum P(2) = 8.4e-05
Identities = 51/241 (21%), Positives = 102/241 (42%)
Query: 643 MQTEQRLIEDEAAKLQKEREEI-INIVQIEKRKRREMENHINLRKRKLESIEKEDDINTA 701
+Q E++ ++ + +L+ + + I+ ++++ E + L+ + + + +N+
Sbjct: 1058 LQAEKQALKTQLKQLETQNNNLQAQILALQRQTVSLQEQNTTLQTQNAKLQVENSTLNSQ 1117
Query: 702 LAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAE--KHMASIEF--DAKIRELEFN 757
L++Q A L IQQ E ++++ E K Y K +E + + E E
Sbjct: 1118 STSLMNQNAQLLIQQSSLENENESVIKEREDLKSLYDSLIKDHEKLELLHERQASEYESL 1177
Query: 758 LKQHEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIA-FITPELEKEFLEMPTTIEE 816
+ +H L A + E +++E L K Q E + + E EK LE E
Sbjct: 1178 ISKHGTLK-SAHKNLEVEHRDLEDRYNQLLKQKGQLEDLEKMLKVEQEKMLLENKNH-ET 1235
Query: 817 LEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEK 876
+ A + + + + +L+E E Q ++L + K E R AE LKE+
Sbjct: 1236 VAAEYKKLCGENDRLNHTYSQLLKETEVLQTDHKNLKSLLNNSKLEQTRLEAEFSKLKEQ 1295
Query: 877 W 877
+
Sbjct: 1296 Y 1296
Score = 101 (40.6 bits), Expect = 8.4e-05, Sum P(2) = 8.4e-05
Identities = 71/318 (22%), Positives = 142/318 (44%)
Query: 643 MQTEQRLIEDEAAKLQKEREEIINIV----QIEKRKRREMENHINLRKRKLESIEKEDDI 698
++ E +E E KL+K + N+ +EK + E ++ LR R +ES+ K +
Sbjct: 661 LEQENSELERENRKLKKTLDSFKNLTFQLESLEKENSQLDEENLELR-RNVESL-KCASM 718
Query: 699 NTALAKLVDQAADLNIQQFKYAIEI-KNLLVEIVSCKWSYA------EKHMASIE-FDAK 750
A +L ++ + +Q K +E+ K + + SY ++ ++E + K
Sbjct: 719 KMAQLQLENKELESEKEQLKKGLELLKASFKKTERLEVSYQGLDIENQRLQKTLENSNKK 778
Query: 751 IRELEFNLK--QHEKLALQASLH-YEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEF 807
I++LE L+ + E LQ +L + K +E K +++ + +LEKE
Sbjct: 779 IQQLESELQDLEMENQTLQKNLEELKISSKRLEQLEKENKSLEQETSQLEKDKKQLEKEN 838
Query: 808 LEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFL 867
+ E + +++N + ++ N+ + +E + L ++ +K+ +KR
Sbjct: 839 KRLRQQAEIKDTTLEENNVKIGNLEKENKTLSKEIGIYKESCVRLKELEKENKELVKR-- 896
Query: 868 AEIDALKEKWLPTLR-NLVA------QIN---ETFSRNFQEMAVAGEVSL-DEHESDFDK 916
A ID K L TLR +LV+ Q+N E + +++ + E L DE +D +
Sbjct: 897 ATIDI---KTLVTLREDLVSEKLKTQQMNNDLEKLTHELEKIGLNKERLLHDEQSTDDSR 953
Query: 917 FGIL-IKVKFRQSGQLEV 933
+ +L K++ LE+
Sbjct: 954 YKLLESKLESTLKKSLEI 971
Score = 91 (37.1 bits), Expect = 8.4e-05, Sum P(2) = 8.4e-05
Identities = 63/293 (21%), Positives = 117/293 (39%)
Query: 178 QLPVQHCALVEKSSKLKTIECTVKRNGDTLNQL--KALNVEQ-EKDVERVRQRAELLEKV 234
Q+ ++ L +++ L + + + D L+ L KA+ V++ E +V R ++R L +
Sbjct: 283 QMEIELKRLQQENMNLLSDARSARMYRDELDALREKAVRVDKLESEVSRYKER---LHDI 339
Query: 235 ESMKKKLPWLKYDMKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKP---IEGKKQEKAI- 290
E K ++ LK D + + + LHE K ++ K + +
Sbjct: 340 EFYKARVEELKEDNQVL--LETKTMLEDQLEGTRARSDKLHELEKENLQLKAKLHDMEME 397
Query: 291 LDGDCKKLSSLINENSKRRMDFLEKVDQGV-------QVQGKYKXXXXXXXXXXXXXXXI 343
D D KK+ L+ EN M + +D+ + Q+ + +
Sbjct: 398 RDMDRKKIEELMEENMTLEMAQKQSMDESLHLGWELEQISRTSELSEAPQKSLGHEVNEL 457
Query: 344 LKARXXXXXXX--XXXQTVPAYEPPHDKIEKLGSQILELGVQANQKRLQKSE-KEKILNQ 400
+R +TV D +E S+IL++ + NQ+ +K E E + Q
Sbjct: 458 TSSRLLKLEMENQSLTKTVEELRTTVDSVEGNASKILKMEKE-NQRLSKKVEILENEIVQ 516
Query: 401 NKLTLRQCSDRLKD-MEDKNN--KLLHALRNSGAENIFEAYCWLQQHRHELNK 450
K +L+ C + KD M++K K + LR + I L+Q LN+
Sbjct: 517 EKQSLQNCQNLSKDLMKEKAQLEKTIETLRENSERQIKI----LEQENEHLNQ 565
Score = 84 (34.6 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 70/348 (20%), Positives = 150/348 (43%)
Query: 123 NGKVVPKGEVLE---ITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQL 179
N ++ K E+LE + ++ ++Q N Q L +D + E A+L K +E T + + Q+
Sbjct: 500 NQRLSKKVEILENEIVQEKQSLQ--NC-QNLSKDLMKEKAQLE--KTIE-TLRENSERQI 553
Query: 180 PVQHCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDV--ERVRQRAELLEKVE-- 235
+ L +++ L ++++ + + ++E+E + E +++ + L K+E
Sbjct: 554 KI----LEQENEHLNQTVSSLRQRSQISAEARVKDIEKENKILHESIKETSSKLSKIEFE 609
Query: 236 --SMKKKLPWLKYDMKKAEYIXXXXXXXXXXXXXXXXXNT-LHEFSKPIEGKKQEKAILD 292
+KK+L K ++AE + T L + IE +QE + L+
Sbjct: 610 KRQIKKELEHYKEKGERAEELENELHHLEKENELLQKKITNLKITCEKIEALEQENSELE 669
Query: 293 GDCKKLSSLIN--ENSKRRMDFLEKVDQGVQVQG-KYKXXXXXXXXXXXXXXXI-LKARX 348
+ +KL ++ +N +++ LEK + + + + + + L+ +
Sbjct: 670 RENRKLKKTLDSFKNLTFQLESLEKENSQLDEENLELRRNVESLKCASMKMAQLQLENKE 729
Query: 349 XXXXXXXXXQTVPAYEPPHDKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQC 408
+ + + K E+L ++ G+ +RLQK+ + N NK ++Q
Sbjct: 730 LESEKEQLKKGLELLKASFKKTERL--EVSYQGLDIENQRLQKT----LENSNK-KIQQL 782
Query: 409 SDRLKDMEDKNNKL---LHALRNSGA--ENIFEAYCWLQQHRHELNKE 451
L+D+E +N L L L+ S E + + L+Q +L K+
Sbjct: 783 ESELQDLEMENQTLQKNLEELKISSKRLEQLEKENKSLEQETSQLEKD 830
>UNIPROTKB|E1C8N6 [details] [associations]
symbol:EVI5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005097 "Rab GTPase activator activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR000195
Pfam:PF00566 PROSITE:PS50086 SMART:SM00164 GO:GO:0005622
GO:GO:0005097 GO:GO:0032851 SUPFAM:SSF47923
GeneTree:ENSGT00700000104071 OMA:KNSEMLA EMBL:AADN02012867
IPI:IPI00588249 Ensembl:ENSGALT00000009552 Uniprot:E1C8N6
Length = 715
Score = 125 (49.1 bits), Expect = 8.8e-05, Sum P(2) = 8.8e-05
Identities = 77/319 (24%), Positives = 141/319 (44%)
Query: 644 QTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKE-DDINTAL 702
Q E + + E +L K+R E + Q+ + + E EN+ L KR+L +I+++ D+ NT L
Sbjct: 382 QVEIKRLRTEN-RLLKQRIETLEKGQVTRAQEAE-ENY--LIKRELATIKQQSDEANTKL 437
Query: 703 AKLVDQAADLNIQQ------FKYAIE-IKNLLVEIVSCKWSYAEKHMASIEFDAKIRELE 755
+ +L QQ +Y+ + + L E+V + S AE H A E K+ E+E
Sbjct: 438 EQAESTIRELQQQQQWHKCSSRYSEDFVLQLEKELVQARLSEAESHCALKEMQDKVLEME 497
Query: 756 ---FNLKQHEKLA-LQ-----ASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKE 806
+L E +A LQ L + ++ R+ + D + + T K+
Sbjct: 498 KRNSSLPDEENVARLQEELIAVKLREAEALMGLKELRQQVKDLEEHWQRHLARTTGRWKD 557
Query: 807 FLEMPTTIEELEAAIQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRF 866
T+ EL QD + Q L+E + R ++E T+ + + L+R
Sbjct: 558 -PPRKNTVNEL----QDELMTVRLREAETQAELKETKQRMMEME---TQSQINNNHLRRA 609
Query: 867 LAEIDALKEK--WLPTLRN--LVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIK 922
E+ +L+EK +L T +N L+AQ+NE R + + E + + D + +
Sbjct: 610 ELEVTSLQEKVQYL-TAQNKGLLAQLNEAKRRQAEIECKSKEEVMAARLREADSIAAVAE 668
Query: 923 VKFRQSGQLEVLSAHHQSG 941
++ + +LE+ + G
Sbjct: 669 LQ-QHIAELEIQPKQKEEG 686
Score = 57 (25.1 bits), Expect = 8.8e-05, Sum P(2) = 8.8e-05
Identities = 19/91 (20%), Positives = 44/91 (48%)
Query: 150 LPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNGDTLNQ 209
L Q E +L +L+ +K + Q L++ S ++K +K+
Sbjct: 315 LLQTNQAELLQLDMEGMLQHFQKVIPH-QFDSGPDKLIQASYQVKYNAKKMKKLEKEYTT 373
Query: 210 LKALNVEQEKDVERVRQRAELL-EKVESMKK 239
+K +E++ +++R+R LL +++E+++K
Sbjct: 374 IKTKEMEEQVEIKRLRTENRLLKQRIETLEK 404
>UNIPROTKB|F1NMQ0 [details] [associations]
symbol:GOLGA4 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000042 "protein targeting to Golgi"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
InterPro:IPR000237 Pfam:PF01465 PROSITE:PS50913 SMART:SM00755
GO:GO:0005794 GeneTree:ENSGT00700000104373 GO:GO:0000042
Gene3D:1.10.220.60 SUPFAM:SSF101283 EMBL:AADN02001385
EMBL:AADN02001386 IPI:IPI00579194 Ensembl:ENSGALT00000037470
OMA:AQEVESE ArrayExpress:F1NMQ0 Uniprot:F1NMQ0
Length = 2150
Score = 132 (51.5 bits), Expect = 0.00062, Sum P(3) = 0.00062
Identities = 66/318 (20%), Positives = 152/318 (47%)
Query: 658 QKEREEIINIVQIEKRKR-REMENHINLRKRKLESIEKEDD-INTALAKLVDQAADLNIQ 715
+K EE+ +++ EK++ +E+ + + K +LE+++++ + + T +++ Q + I+
Sbjct: 536 KKRSEELSTLMESEKKQHNKEVSDIVEKHKEELENVKQQQEKLWTEKLQILQQQHVIEIE 595
Query: 716 QF--KYAIEIKNLLVEIVSCKWSYAEK-HMASIE-FDAKIRELE-FNLKQHEKLALQASL 770
+ K EI +L E + ++ E+ + ++E D K ELE + + E L ++ L
Sbjct: 596 KMREKQEQEIDTILKEKETVFRTHIEEMNEKTLEKLDVKQTELETLSSELSEALKVRQDL 655
Query: 771 HYE--DCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAAIQDNISQA 828
E + K +V ++ + K +AE E+E E +I+++E +++ ++Q
Sbjct: 656 EQELSELKSKVGEAKQEF-EGKLEAERNQH-KEEVEIMLKEHEISIQDVEKVLKEELNQT 713
Query: 829 NSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPTLRNLVAQI 888
+ +L+E + R++++++ + + EA+ ++ L E ++ T Q
Sbjct: 714 KQSLEEKERLLEEAKTREQELKESAQRSEAELVQVSARLMEASLSQQN---TSNEQAKQY 770
Query: 889 NETFSRNFQE-MAVAGE-VSLDEH----ESDFDKFGILIKVKFRQSGQL-EVLSAHHQSG 941
E ++ Q+ M + GE + L E ES ++ +++ Q +L + L
Sbjct: 771 EEELAKLQQKLMDLKGEKLQLSEQLVRTESQLNEVKNELELYISQVHELKQQLQEQSDEN 830
Query: 942 GERSVS-TILYLVSLQDL 958
++ +S T Y L+DL
Sbjct: 831 TQKVMSLTQQYESQLKDL 848
Score = 129 (50.5 bits), Expect = 0.00010, Sum P(3) = 0.00010
Identities = 74/311 (23%), Positives = 149/311 (47%)
Query: 649 LIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDDINTALAKLVDQ 708
++E++ +++K+ E+ ++I+ + E+E HI + + +S+++E + +
Sbjct: 1433 VLEEKENRIEKQESELTAELKIQAARVAELEEHIAQKTSENDSLKEELKRYHEQKDMEQK 1492
Query: 709 AADLNIQQF-KYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEFN-LKQHEKLAL 766
+QQ K A E + L E K E + S++ + + +E EF+ +K +
Sbjct: 1493 EVARQLQQAEKVAFEKDSRLKEAEE-KVLNLENEIGSLKAECEAKEREFDQMKSAILKSK 1551
Query: 767 QASLHYEDCKKEVEHCRKHLSDAKRQAES-IAFITPELEKEFLEMPTTIEELEAAIQDNI 825
+ L + + E+ K L+D K++AE I I EL ++ +EE E ++ +
Sbjct: 1552 EEELKELEERLNAENSCK-LADLKKKAEQKIGSIKRELVRQ-------MEEKEQQLKQD- 1602
Query: 826 SQANSIFFLNQNILQEYEHRQRQIEDLSTKQEA--DKKELKR-FLAEIDALK---EKWLP 879
+ N + L Q + QE R+ +IE L K ++ D EL+R L +I++ K E+
Sbjct: 1603 -RENQVRHLEQKV-QE---REAKIESLEEKMKSVRDSTELEREMLQKIESTKAAVEQEKN 1657
Query: 880 TLRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGI--LIKVKFRQSGQLEVLS-A 936
+ V Q +E Q+ + L ++ES+ + GI L++++ +Q L+ L A
Sbjct: 1658 EVIKSVQQTHEEKINKLQKDLIEKNKLLQKYESE-QREGIDSLLELQSKQEELLKKLECA 1716
Query: 937 HHQSGGERSVS 947
+ E+SV+
Sbjct: 1717 EKRHREEQSVT 1727
Score = 119 (46.9 bits), Expect = 8.8e-05, Sum P(3) = 8.8e-05
Identities = 59/262 (22%), Positives = 117/262 (44%)
Query: 644 QTEQRLIEDEAAKLQKEREEIINIVQI-EKRKRREMENHINLRKRKLESIEKEDDINTAL 702
++EQR D +LQ ++EE++ ++ EKR R E LR+ +LE K+ +
Sbjct: 1689 ESEQREGIDSLLELQSKQEELLKKLECAEKRHREEQSVTEGLRE-ELEEQAKKYSL---- 1743
Query: 703 AKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELEF-NLKQH 761
LVD+ A F+ ++ K+ + + K E ++A + + ELE +LK
Sbjct: 1744 --LVDEHARCGGGDFQKKMQEKDAVSHSLEQKVKELEDNLAKVN-EVHKTELEDRSLKYE 1800
Query: 762 EKL-ALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAA 820
E L +LQ L E+ ++ ++ + + + + +++ + ++ +EE E
Sbjct: 1801 ENLKSLQQQL--EERNDRLKAFEENAEEKAKSGLELQKLLGDMQNQQKDLQAKLEEAERE 1858
Query: 821 IQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPT 880
Q NS+ Q L+ +Q D+ K+ ++ E K E + ++ K T
Sbjct: 1859 KQKLRKDVNSL----QKDLRTLRKEHQQELDIVKKESLEEMEQK-IRCEQEDIELKHSST 1913
Query: 881 LRNLVAQINETFSRNFQEMAVA 902
L+ L+ + N ++ E+ A
Sbjct: 1914 LKQLMREFNTQLAQKEMELETA 1935
Score = 68 (29.0 bits), Expect = 8.8e-05, Sum P(3) = 8.8e-05
Identities = 23/103 (22%), Positives = 49/103 (47%)
Query: 142 QVNNLTQFLPQDRVCEFAKLS--PVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECT 199
++++ + L Q++ ++ KL E KA + H A+ + SKL+
Sbjct: 1348 ELSSSVELLRQEKASALEQVDHCTAKLSEWKTKA--QTRFTQNHEAIKDLQSKLEVSNTQ 1405
Query: 200 VKRNGDTLNQLKALNVEQEKDVERVRQRAELLE-KVESMKKKL 241
+ G+ L++LK +Q KD++ ++ E E ++E + +L
Sbjct: 1406 ATKKGEELDKLKEELAQQGKDLDSLKSVLEEKENRIEKQESEL 1448
Score = 65 (27.9 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 73/378 (19%), Positives = 142/378 (37%)
Query: 95 ISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVP-----KGEVLEITKRFNIQVNNLTQF 149
+ +R D ++E + K+ K E F GK+ K EV + K I + ++ +
Sbjct: 649 LKVRQDLEQELSELKSKVGEA-KQE--FEGKLEAERNQHKEEVEIMLKEHEISIQDVEKV 705
Query: 150 LPQDRVCEFAKLSPV-KLLEETEKAVGDPQLPVQH--CALVEKSSKLKTIECTVKRNGDT 206
L ++ L +LLEE + + + Q LV+ S++L +E ++ + +
Sbjct: 706 LKEELNQTKQSLEEKERLLEEAKTREQELKESAQRSEAELVQVSARL--MEASLSQQNTS 763
Query: 207 LNQLKALNVE----QEKDVERVRQRAELLEKVESMKKKLPWLKYDMKKAEYIXXXXXXXX 262
Q K E Q+K ++ ++ +L E++ + +L +K +++ YI
Sbjct: 764 NEQAKQYEEELAKLQQKLMDLKGEKLQLSEQLVRTESQLNEVKNELEL--YISQVHELKQ 821
Query: 263 XXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSLINENSKRRMDFLEKVDQGVQV 322
NT S + + Q K + + + K + E + ++ ++KV
Sbjct: 822 QLQEQSDE-NTQKVMSLTQQYESQLKDLQE-EADKAKQTLTER-ENDIEHVKKVQNEEME 878
Query: 323 QGKYKXXXXXXXXXXXXXXXILKARXXXXXXXXXXQTVPAYEPPHDKIEKLGSQILELGV 382
+ K K K + Q + K KL Q +L
Sbjct: 879 ELKQKLLATEERISTLQGDYENKLKRQENKMEKMKQKSKEMQETFKK--KLAEQESKLKK 936
Query: 383 QANQKRLQKSEKEKILNQNKLTLRQCS-----DRLKDMEDKNNKLLHALRNSGAENIFE- 436
+ K+L+ S+KE N L + S D + +E + L +L + + E
Sbjct: 937 ELENKQLEFSQKESEFNAKMLEMAHASSAGINDAVSKLESNQKEQLESLAEAHKRELEEI 996
Query: 437 AYCW---LQQHRHELNKE 451
+ W L Q EL ++
Sbjct: 997 SRSWEKKLNQQAEELQEK 1014
Score = 61 (26.5 bits), Expect = 0.00043, Sum P(3) = 0.00043
Identities = 28/112 (25%), Positives = 52/112 (46%)
Query: 131 EVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETE-----KAVGDPQ--LPVQH 183
+V E++ + L Q C AKLS K +T +A+ D Q L V +
Sbjct: 1345 QVQELSSSVELLRQEKASALEQVDHCT-AKLSEWKTKAQTRFTQNHEAIKDLQSKLEVSN 1403
Query: 184 CALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVE 235
+K +L ++ + + G L+ LK++ E+E +E+ Q +EL +++
Sbjct: 1404 TQATKKGEELDKLKEELAQQGKDLDSLKSVLEEKENRIEK--QESELTAELK 1453
Score = 60 (26.2 bits), Expect = 0.00010, Sum P(3) = 0.00010
Identities = 30/113 (26%), Positives = 52/113 (46%)
Query: 130 GEVLEITKRFNIQVNNLTQFLPQDR--VCEFAKLSPVKLLEETEKAVGDPQLPVQHCALV 187
GE ++ + NL + L QD+ V K + LE E+ V QL + +
Sbjct: 291 GEKTKLITQLR-DAKNLIEQLEQDKGMVIAETKRQMHETLEMKEEEVA--QLRARIKQIT 347
Query: 188 EKSSKLKTIECTVKRNGDTLNQL-KALNVEQEKDVERVRQRAELLEKVESMKK 239
+ +LK E K +L KAL + Q + R + +AE+ EK+++++K
Sbjct: 348 TQGEELK--EQKEKFERAAFEELEKALGMAQRTEEARKKLQAEMDEKIKAVEK 398
Score = 58 (25.5 bits), Expect = 0.00085, Sum P(3) = 0.00085
Identities = 31/129 (24%), Positives = 58/129 (44%)
Query: 134 EITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLL---EETEKAVGDPQLPVQHC--ALVE 188
E+T R +V + + +DRV E KL ++ +E + + + Q A +E
Sbjct: 410 ELT-RVKQEVVEIMKKSSEDRVAELEKLHKEEMATKDQELNERLQAQEREFQEKMKAALE 468
Query: 189 KSSK--LKTIECTVKRNGDTLNQL----KALNVEQEKDVERVRQRAELLE-KVESMKKKL 241
K+ LKT++ ++ L +L KA+ E +K +E + Q E + ++ ++ L
Sbjct: 469 KNQSECLKTLQEQEQQESLALEELELQKKAIQSECDKKLEEMHQEVETFKTRILELESSL 528
Query: 242 PWLKYDMKK 250
D KK
Sbjct: 529 AKCSQDDKK 537
Score = 55 (24.4 bits), Expect = 8.8e-05, Sum P(3) = 8.8e-05
Identities = 20/68 (29%), Positives = 32/68 (47%)
Query: 359 TVPAYEPPHDKIEKLGSQILELGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDK 418
T A E +++ K Q E + QK L EK K+L + + R+ D L +++ K
Sbjct: 1648 TKAAVEQEKNEVIKSVQQTHEEKINKLQKDL--IEKNKLLQKYESEQREGIDSLLELQSK 1705
Query: 419 NNKLLHAL 426
+LL L
Sbjct: 1706 QEELLKKL 1713
Score = 53 (23.7 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 19/66 (28%), Positives = 34/66 (51%)
Query: 387 KRLQKSEKEKILNQNKLTLRQCSDRL-KDMEDKNNKLLHALRNSGAENIFEAYCWLQQHR 445
K + EK +++ + T + ++L KD+ +KN KLL + E I ++ LQ +
Sbjct: 1649 KAAVEQEKNEVIKSVQQTHEEKINKLQKDLIEKN-KLLQKYESEQREGI-DSLLELQSKQ 1706
Query: 446 HELNKE 451
EL K+
Sbjct: 1707 EELLKK 1712
Score = 52 (23.4 bits), Expect = 0.00010, Sum P(3) = 0.00010
Identities = 19/91 (20%), Positives = 45/91 (49%)
Query: 364 EPPHDKIEKLGSQILELG---VQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNN 420
E H ++E ++ILEL + +Q ++SE+ L +++ +Q + + D+ +K+
Sbjct: 508 EEMHQEVETFKTRILELESSLAKCSQDDKKRSEELSTLMESEK--KQHNKEVSDIVEKHK 565
Query: 421 KLLHALRNSGAENIFEAYCWLQQHRHELNKE 451
+ L ++ E ++ + Q +H + E
Sbjct: 566 EELENVKQQ-QEKLWTEKLQILQQQHVIEIE 595
Score = 41 (19.5 bits), Expect = 0.00062, Sum P(3) = 0.00062
Identities = 15/50 (30%), Positives = 24/50 (48%)
Query: 370 IEKLGSQILE-LGVQANQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDK 418
+EK S+ L+ L Q Q+ L E E Q K +C +L++M +
Sbjct: 467 LEKNQSECLKTLQEQEQQESLALEELEL---QKKAIQSECDKKLEEMHQE 513
>MGI|MGI:1915589 [details] [associations]
symbol:Ccdc88c "coiled-coil domain containing 88C"
species:10090 "Mus musculus" [GO:0000226 "microtubule cytoskeleton
organization" evidence=IEA] [GO:0001932 "regulation of protein
phosphorylation" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0016055 "Wnt receptor
signaling pathway" evidence=IEA] [GO:0030165 "PDZ domain binding"
evidence=IPI] [GO:0031648 "protein destabilization" evidence=IMP]
[GO:0043621 "protein self-association" evidence=IPI] [GO:0051260
"protein homooligomerization" evidence=IPI] InterPro:IPR008636
Pfam:PF05622 MGI:MGI:1915589 GO:GO:0005737 GO:GO:0000226
GO:GO:0016055 GO:GO:0051260 HSSP:P01096 eggNOG:NOG12793
GO:GO:0001932 GO:GO:0031648 GeneTree:ENSGT00690000101702 CTD:440193
HOGENOM:HOG000112146 HOVERGEN:HBG057867 OMA:KEQHQSM
OrthoDB:EOG47M1X2 EMBL:AY339881 EMBL:AK137260 IPI:IPI00417106
IPI:IPI00844630 RefSeq:NP_080957.2 UniGene:Mm.156217
ProteinModelPortal:Q6VGS5 SMR:Q6VGS5 MINT:MINT-1890259
STRING:Q6VGS5 PhosphoSite:Q6VGS5 PaxDb:Q6VGS5 PRIDE:Q6VGS5
Ensembl:ENSMUST00000068411 Ensembl:ENSMUST00000085096 GeneID:68339
KEGG:mmu:68339 UCSC:uc007ote.1 NextBio:327021 Bgee:Q6VGS5
CleanEx:MM_CCDC88C Genevestigator:Q6VGS5 Uniprot:Q6VGS5
Length = 2009
Score = 121 (47.7 bits), Expect = 8.9e-05, Sum P(3) = 8.9e-05
Identities = 50/242 (20%), Positives = 102/242 (42%)
Query: 643 MQTEQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEKEDD-INTA 701
+Q E++L++++ L+ + + + +++ ++ H + + ++ E+ +++
Sbjct: 1060 LQAERQLLKEQLQHLETQNVSFSSQILTLQKQSAFLQEHTTTLQTQTAKLQVENSTLSSQ 1119
Query: 702 LAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYA-----EKHMASIEFDAKIRELEF 756
A L Q L QQ E + L + Y KH+ ++ ++ + E E
Sbjct: 1120 NAALSAQYTVLQSQQAAKEAEHEGLQQQQEQLAAVYEALLQDHKHLGTL-YECQSSEYEA 1178
Query: 757 NLKQHEKL-ALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIE 815
++QH L L +L E KE+ L K + E + + E+E LE
Sbjct: 1179 LIRQHSCLKTLHRNLELEH--KELGERHGDLQQRKAELEELEKVL-STEREALEREQKTN 1235
Query: 816 ELEAAIQDNI-SQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALK 874
+ + + + + I FL+Q + EYE ++L T + EL R+ D LK
Sbjct: 1236 AIATSENQRLRGELDRISFLHQQLKGEYEELHAHTKELKTSLNNSQLELSRWQVRFDELK 1295
Query: 875 EK 876
E+
Sbjct: 1296 EQ 1297
Score = 64 (27.6 bits), Expect = 8.9e-05, Sum P(3) = 8.9e-05
Identities = 28/121 (23%), Positives = 52/121 (42%)
Query: 183 HCALVEKSSKLKTIECTVKRNGDTLNQLKALNVEQEKDVERVRQRAELLEKVESMKKKLP 242
H A+ E SKL +E ++ L + K EQ + +E+ R E ++ E + K++
Sbjct: 593 HQAVTEAGSKLSQLELEKQQLHRDLEEAKEKG-EQAEALEKELHRLE--KENEQLTKEVT 649
Query: 243 WLKYDMKKAEYIXXXXXXXXXXXXXXXXX-NTLHEFSKPIEGKKQEKAILDGDCKKLSSL 301
LK +K E + +TL S +EG +++K L + +L +
Sbjct: 650 SLKAATEKVEALEHQSQGLELENRSLRKSLDTLQNVSVQLEGLERDKQQLGQENLELRKM 709
Query: 302 I 302
+
Sbjct: 710 V 710
Score = 57 (25.1 bits), Expect = 0.00043, Sum P(3) = 0.00043
Identities = 43/206 (20%), Positives = 85/206 (41%)
Query: 131 EVLEITKRFNIQVNNLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQ-LPVQHCALVEK 189
E+ +++K ++ + F+ + C +++ +KL +E + Q L AL E
Sbjct: 435 ELEQLSKNADLSDASRKSFVFELNECASSRI--LKLEKENQSLQSTIQGLRDTSLALEES 492
Query: 190 SSKLKTIECTVKRNGDTLNQLKALNVEQEK----DVERVRQRAELLEKVESMKKKLPWLK 245
S K +E ++ + +L+ +E+EK D+E + + EL+ + E ++ + LK
Sbjct: 493 SLKYGELEKENQQLSKKIEKLQT-QLEREKQSNQDLETLSE--ELIREKEQLQSGMEALK 549
Query: 246 YD----MKKAEYIXXXXXXXXXXXXXXXXXNTLHEFSKPIEGKKQEKAILDGDCKKLSSL 301
D +K E N+ + K E + +A+ + KLS L
Sbjct: 550 ADRARQIKDLEQEKGHLHQAVWSLRERPQVNSTKDVEK--ENRALHQAVTEAG-SKLSQL 606
Query: 302 INENSKRRMDFLEKVDQGVQVQGKYK 327
E + D E ++G Q + K
Sbjct: 607 ELEKQQLHRDLEEAKEKGEQAEALEK 632
Score = 56 (24.8 bits), Expect = 8.9e-05, Sum P(3) = 8.9e-05
Identities = 22/73 (30%), Positives = 39/73 (53%)
Query: 368 DKIEKLGSQILELG--VQA----NQKRLQKSEKEKILNQNKLTLRQCSDRLKDMEDKNNK 421
DK ++LG + LEL V+A + K Q + + L + K LR+ + LK + K+ +
Sbjct: 695 DK-QQLGQENLELRKMVEAMRFTSAKMAQIETENRQLEREKEELRRDVELLKTLSKKSER 753
Query: 422 LLHALRNSGAENI 434
L + ++ AEN+
Sbjct: 754 LELSYQSVSAENL 766
>RGD|3140 [details] [associations]
symbol:Myh9 "myosin, heavy chain 9, non-muscle" species:10116
"Rattus norvegicus" [GO:0000146 "microfilament motor activity"
evidence=ISO;ISS] [GO:0000212 "meiotic spindle organization"
evidence=ISO] [GO:0000904 "cell morphogenesis involved in
differentiation" evidence=ISO] [GO:0000910 "cytokinesis"
evidence=ISO;ISS] [GO:0001525 "angiogenesis" evidence=ISO;ISS]
[GO:0001701 "in utero embryonic development" evidence=ISO]
[GO:0001725 "stress fiber" evidence=ISO;ISS] [GO:0001726 "ruffle"
evidence=ISO;ISS] [GO:0001768 "establishment of T cell polarity"
evidence=ISO] [GO:0001931 "uropod" evidence=ISO] [GO:0003779 "actin
binding" evidence=ISO] [GO:0005391 "sodium:potassium-exchanging
ATPase activity" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005516 "calmodulin binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=ISO;ISS;IDA]
[GO:0005826 "actomyosin contractile ring" evidence=ISO;ISS]
[GO:0005829 "cytosol" evidence=ISO;ISS] [GO:0005886 "plasma membrane"
evidence=ISO;ISS] [GO:0005913 "cell-cell adherens junction"
evidence=ISO] [GO:0005938 "cell cortex" evidence=ISO] [GO:0006200
"ATP catabolic process" evidence=ISO;ISS] [GO:0006509 "membrane
protein ectodomain proteolysis" evidence=ISO;ISS] [GO:0006928
"cellular component movement" evidence=ISO] [GO:0007132 "meiotic
metaphase I" evidence=ISO] [GO:0007155 "cell adhesion" evidence=ISO]
[GO:0007520 "myoblast fusion" evidence=ISO] [GO:0008305 "integrin
complex" evidence=ISO;ISS] [GO:0008360 "regulation of cell shape"
evidence=ISO;ISS] [GO:0010524 "positive regulation of calcium ion
transport into cytosol" evidence=IMP] [GO:0015031 "protein transport"
evidence=ISO;ISS] [GO:0015629 "actin cytoskeleton" evidence=ISO;ISS]
[GO:0016328 "lateral plasma membrane" evidence=IDA] [GO:0016337
"cell-cell adhesion" evidence=ISO] [GO:0016459 "myosin complex"
evidence=IEA;ISO] [GO:0016460 "myosin II complex" evidence=ISO]
[GO:0016887 "ATPase activity" evidence=ISO;ISS] [GO:0019901 "protein
kinase binding" evidence=IPI] [GO:0030048 "actin filament-based
movement" evidence=ISO;ISS] [GO:0030220 "platelet formation"
evidence=ISO;ISS] [GO:0030224 "monocyte differentiation"
evidence=ISO;ISS] [GO:0030863 "cortical cytoskeleton" evidence=ISO]
[GO:0030898 "actin-dependent ATPase activity" evidence=ISO]
[GO:0031252 "cell leading edge" evidence=ISO;ISS] [GO:0031532 "actin
cytoskeleton reorganization" evidence=ISO;ISS] [GO:0031762
"follicle-stimulating hormone receptor binding" evidence=IDA]
[GO:0032154 "cleavage furrow" evidence=ISO;ISS] [GO:0032796 "uropod
organization" evidence=ISO] [GO:0042803 "protein homodimerization
activity" evidence=ISO;ISS] [GO:0043234 "protein complex"
evidence=ISO;ISS;IDA] [GO:0043495 "protein anchor" evidence=ISO;ISS]
[GO:0043531 "ADP binding" evidence=ISO] [GO:0043534 "blood vessel
endothelial cell migration" evidence=ISO;ISS] [GO:0045807 "positive
regulation of endocytosis" evidence=IMP] [GO:0050766 "positive
regulation of phagocytosis" evidence=IMP] [GO:0051015 "actin filament
binding" evidence=ISO;ISS] [GO:0051295 "establishment of meiotic
spindle localization" evidence=ISO] [GO:0070062 "extracellular
vesicular exosome" evidence=ISO] [GO:0005768 "endosome" evidence=IDA]
[GO:0045335 "phagocytic vesicle" evidence=IDA] [GO:0001772
"immunological synapse" evidence=ISO] [GO:0005819 "spindle"
evidence=ISO] [GO:0008180 "signalosome" evidence=ISO] [GO:0031594
"neuromuscular junction" evidence=ISO] InterPro:IPR000048
InterPro:IPR001609 InterPro:IPR002928 InterPro:IPR004009 Pfam:PF00063
Pfam:PF00612 Pfam:PF01576 Pfam:PF02736 PRINTS:PR00193 PROSITE:PS50096
SMART:SM00015 SMART:SM00242 RGD:3140 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0043234 GO:GO:0042803 GO:GO:0005819 GO:GO:0008360
GO:GO:0030863 GO:GO:0015031 GO:GO:0001701 GO:GO:0031594 GO:GO:0051015
GO:GO:0043531 GO:GO:0001525 GO:GO:0005913 GO:GO:0000910 GO:GO:0031532
GO:GO:0050766 GO:GO:0000146 GO:GO:0001725 GO:GO:0001726 GO:GO:0043495
GO:GO:0016337 GO:GO:0005826 GO:GO:0006509 GO:GO:0007520 GO:GO:0043534
GO:GO:0016328 GO:GO:0010524 GO:GO:0008180 GO:GO:0032154 GO:GO:0030048
eggNOG:COG5022 GO:GO:0051295 GO:GO:0005391 GO:GO:0001772
GO:GO:0030224 GO:GO:0001768 GO:GO:0007132 GO:GO:0032796 GO:GO:0001931
GO:GO:0000212 GO:GO:0030220 GO:GO:0008305 GO:GO:0016460 GO:GO:0030898
HOGENOM:HOG000173958 HOVERGEN:HBG004704 KO:K10352 OrthoDB:EOG4TXBR1
CTD:4627 EMBL:U31463 IPI:IPI00209113 RefSeq:NP_037326.1
UniGene:Rn.11385 ProteinModelPortal:Q62812 SMR:Q62812 IntAct:Q62812
MINT:MINT-2778870 STRING:Q62812 PhosphoSite:Q62812 PRIDE:Q62812
GeneID:25745 KEGG:rno:25745 UCSC:RGD:3140 InParanoid:Q62812
NextBio:607917 ArrayExpress:Q62812 Genevestigator:Q62812
GermOnline:ENSRNOG00000004860 GO:GO:0031762 Uniprot:Q62812
Length = 1961
Score = 107 (42.7 bits), Expect = 9.0e-05, Sum P(2) = 9.0e-05
Identities = 74/348 (21%), Positives = 153/348 (43%)
Query: 646 EQRLIEDEAAKLQKEREEIINIVQIEKRKRREMENHINLRKRKLESIEK-EDDINTALAK 704
EQ E+E AK E++ Q+ K++ ME+ + + E+ + + D+ +
Sbjct: 1343 EQLEEEEEEAKRNLEKQIATLHAQVTDMKKK-MEDGVGCLETAEEAKRRLQKDLEGLSQR 1401
Query: 705 LVDQAADLN-IQQFKYAI--EIKNLLVEIVSCKWSYAEKHMASIEFDAKIRELE-FNLKQ 760
L ++ A + +++ K + E+ +LLV++ + S + +FD + E + + K
Sbjct: 1402 LEEKVAAYDKLEKTKTRLQQELDDLLVDLDHQRQSVSNLEKKQKKFDQLLAEEKTISAKY 1461
Query: 761 HEKLALQASLHYEDCKKEVEHCRKHLSDAKRQAESIAFITPELEKEFLEMPTTIEELEAA 820
E+ + E +KE K LS A+ E++ ELE+ + T +E+L ++
Sbjct: 1462 AEE---RDRAEAEAREKET----KALSLARALEEAMEQ-KAELERLNKQFRTEMEDLMSS 1513
Query: 821 IQDNISQANSIFFLNQNILQEYEHRQRQIEDLSTKQEADKKELKRFLAEIDALKEKWLPT 880
D + + N+ + Q+ E + Q+E+L + +A + R + A+K ++
Sbjct: 1514 KDDVGKSVHELEKSNRALEQQVEEMKTQLEELEDELQATEDAKLRLEVNLQAMKAQFE-- 1571
Query: 881 LRNLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFGILIKVKFRQSGQLEVLSAHHQS 940
R+L + ++ + Q + E+ E E + + I + + + L+ L AH +
Sbjct: 1572 -RDLQGRDEQSEEKKKQLVRQVREMEA-ELEDERKQRSIAMAARKKLEMDLKDLEAHIDT 1629
Query: 941 GGERSVSTILYLVSLQ-DLTNCPFRVVDEINQGMDPI------NERKM 981
+ I L LQ + +C R VD+ + I NE+K+
Sbjct: 1630 ANKNREEAIKQLRKLQAQMKDC-MRDVDDTRASREEILAQAKENEKKL 1676
Score = 85 (35.0 bits), Expect = 9.0e-05, Sum P(2) = 9.0e-05
Identities = 39/159 (24%), Positives = 73/159 (45%)
Query: 85 KRGEESGYIKISLRGDTKEEHLTIMRKIDTRNKSEWFFNGKVVPKGEVLEITKRFNIQVN 144
+RGE + +K L+G EH + + F G+ V + E+ + + ++++
Sbjct: 1225 ERGELANEVKALLQGKGDSEHKRKKVEAQLQELQVKFSEGERV-RTELADKVSKLQVELD 1283
Query: 145 NLTQFLPQDRVCEFAKLSPVKLLEETEKAVGDPQLPVQHCALVEKSSKLKTIECTVKRNG 204
++T L Q + +KL+ K E + D Q +Q E KL ++ +K+
Sbjct: 1284 SVTGLLNQSD-SKSSKLT--KDFSALESQLQDTQELLQE----ENRQKL-SLSTKLKQME 1335
Query: 205 DTLNQLKALNVEQEKDVER--VRQRAELLEKVESMKKKL 241
D N + E+E++ +R +Q A L +V MKKK+
Sbjct: 1336 DEKNSFREQLEEEEEEAKRNLEKQIATLHAQVTDMKKKM 1374
>UNIPROTKB|Q9TV61 [details] [associations]
symbol:MYH1 "Myosin-1" species:9823 "Sus scrofa"
[GO:0030016 "myofibril" evidence=IEA] [GO:0032982 "myosin filament"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005516
"calmodulin binding" evidence=IEA] [GO:0003779 "actin binding"
evidence=IEA] [GO:0003774 "motor activity" evidence=IEA]
InterPro:IPR000048 InterPro:IPR001609 InterPro:IPR002928
InterPro:IPR004009 Pfam:PF00063 Pfam:PF01576 Pfam:PF02736
PRINTS:PR00193 PROSITE:PS50096 SMART:SM00015 SMART:SM00242
GO:GO:0005524 GO:GO:0030016 GO:GO:0003774 eggNOG:COG5022
GO:GO:0032982 HOVERGEN:HBG004704 KO:K10352 InterPro:IPR015650
PANTHER:PTHR13140:SF22 HOGENOM:HOG000173959 HSSP:P13538 CTD:4619
EMBL:AB025262 RefSeq:NP_001098421.1 UniGene:Ssc.15909
UniGene:Ssc.27020 UniGene:Ssc.94413 ProteinModelPortal:Q9TV61
SMR:Q9TV61 PRIDE:Q9TV61 GeneID:100125538 KEGG:ssc:100125538
Uniprot:Q9TV61
Length = 1939
Score = 145 (56.1 bits), Expect = 9.3e-05, Sum P(2) = 9.3e-05
Identities = 67/314 (21%), Positives = 147/314 (46%)
Query: 643 MQTEQRLIEDEAAKLQKEREEI-INIVQIEKRKRREMENHINLRKRKLESIEKEDDINTA 701
+ ++R +EDE ++L+K+ +++ + + ++EK K EN + ++ +++ T
Sbjct: 940 LTAKKRKLEDECSELKKDIDDLELTLAKVEKEKHAT-ENKVKNLTEEMAGLDETIAKLTK 998
Query: 702 LAKLVDQAADLNIQQFKYAIEIKNLLVEIVSCKWSYAEKHMASIEFDAKIR-ELEFNLKQ 760
K + +A + + + N L + + + S+E + K+R +LE ++
Sbjct: 999 EKKALQEAHQQTLDDLQAEEDKVNTLTKAKTKLEQQVDDLEGSLEQEKKLRMDLERAKRK 1058
Query: 761 HE---KLALQASLHYEDCKKEV-EHCRK---HLSDAKRQAESIAFITPELEKEFLEMPTT 813
E KLA ++++ E+ K+++ E +K +S+ + + E + +L+K+ E+
Sbjct: 1059 LEGDLKLAQESTMDIENDKQQLDEKLKKKEFEMSNLQSKIEDEQALAMQLQKKIKELQAR 1118
Query: 814 IEELEAAIQ-DNISQANSIFFLNQNILQEYEHRQRQIED----------LSTKQEADKKE 862
IEELE I+ + S+A + ++ +E E ++E+ ++ K+EA+ ++
Sbjct: 1119 IEELEEEIEAERASRAKAEK-QRSDLSRELEEISERLEEAGGATSAQIEMNKKREAEFQK 1177
Query: 863 LKRFLAEIDALKEKWLPTLR----NLVAQINETFSRNFQEMAVAGEVSLDEHESDFDKFG 918
++R L E E TLR + VA++ E N Q + E E + + D
Sbjct: 1178 MRRDLEEATLQHEATAATLRKKHADSVAELGEQID-NLQRVKQKLEKEKSEMKMEIDDLA 1236
Query: 919 ILIKVKFRQSGQLE 932
++ + G LE
Sbjct: 1237 SNMETVSKAKGNLE 1250
Score = 46 (21.3 bits), Expect = 9.3e-05, Sum P(2) = 9.3e-05
Identities = 10/14 (71%), Positives = 12/14 (85%)
Query: 389 LQKSEKEKILNQNK 402
L+KSEKE+I QNK
Sbjct: 17 LRKSEKERIEAQNK 30
WARNING: HSPs involving 146 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.133 0.378 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1050 983 0.00098 122 3 11 22 0.42 34
38 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 396
No. of states in DFA: 626 (67 KB)
Total size of DFA: 457 KB (2216 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 116.75u 0.24s 116.99t Elapsed: 00:00:05
Total cpu time: 116.97u 0.24s 117.21t Elapsed: 00:00:05
Start: Tue May 21 05:39:13 2013 End: Tue May 21 05:39:18 2013
WARNINGS ISSUED: 2