Query 001585
Match_columns 1049
No_of_seqs 244 out of 1615
Neff 9.2
Searched_HMMs 29240
Date Wed Mar 27 01:06:38 2013
Command hhsearch -i /local_scratch/syshi/lefta3m3/001585.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H3_0-0//hhsearch_pdb/001585hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1wa5_C Importin alpha RE-expor 1.0 1 1 882.0 75.9 904 1-1026 1-958 (960)
2 4fdd_A Transportin-1; heat rep 1.0 1 1 460.6 70.6 808 3-1024 12-849 (852)
3 3m1i_C Exportin-1; heat repeat 1.0 1 1 427.0 54.5 744 1-821 13-841 (1049)
4 2x1g_F Cadmus; transport prote 1.0 1 1 412.9 56.6 722 1-794 4-840 (971)
5 2x19_B Importin-13; nuclear tr 1.0 1 1 407.3 67.2 738 1-812 21-845 (963)
6 2bpt_A Importin beta-1 subunit 1.0 1 1 399.1 59.4 691 1-794 1-734 (861)
7 1qgr_A Protein (importin beta 1.0 1 1 352.9 59.0 685 5-794 2-745 (876)
8 4hat_C Exportin-1; heat repeat 1.0 1 1 331.4 58.1 742 1-821 13-841 (1023)
9 3ibv_A Exportin-T; karyopherin 1.0 1 1 318.7 57.7 745 1-872 3-872 (980)
10 3gjx_A Exportin-1; transport, 1.0 1 1 317.7 52.3 589 1-642 25-705 (1073)
No 1
>1wa5_C Importin alpha RE-exporter; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1z3h_A
Probab=1.00 E-value=1 Score=882.00 Aligned_cols=904 Identities=17% Similarity=0.255 Sum_probs=745.6
Q ss_pred CC-HHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 99-58999999971499988899999999971069871999999997148683467999999977563037888888689
Q 001585 1 MD-LPSLALILQGALSPNPEERKAAEHSLNQFQYTPQHLVRLLQIIVDNNCDLSVRQVASIHFKNFIAKNWAPHEPNEQQ 79 (1049)
Q Consensus 1 md-~~~l~~~L~~tls~d~~~r~~AE~~L~~~~~~p~f~~~Ll~i~~~~~~~~~iR~~Aai~lKn~I~~~W~~~~~~~~~ 79 (1049)
|. +++|.++|.+++|||+++| ||++|++++++|||+.+|++++.+.+.+..+|++|+++|||.|+++|+..++ ..
T Consensus 1 M~d~~~l~~~L~~~~spd~~~r--Ae~~L~~~~~~p~~~~~L~~il~~~~~~~~vR~~A~i~lkn~i~~~w~~~~~--~~ 76 (960)
T 1wa5_C 1 MSDLETVAKFLAESVIASTAKT--SERNLRQLETQDGFGLTLLHVIASTNLPLSTRLAGALFFKNFIKRKWVDENG--NH 76 (960)
T ss_dssp CCHHHHHHHHHHHTTSGGGHHH--HHHHHHHHHTSTTHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHHHHSBCSSS--CB
T ss_pred CCCHHHHHHHHHHHCCCCHHHH--HHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCC--CC
T ss_conf 9759999999997659987899--9999998555998899999998657988889999999999999854887656--78
Q ss_pred CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHCCC
Q ss_conf 99967899999999989611995889999999999997308998245799999971033---398899999999995016
Q 001585 80 KISQVDKDMVRDHILVFVAQVPPLLRVQLGECLKTIIHADYPEQWPHLLDWVKHNLQDQ---QVYGALFVLRILSRKYEY 156 (1049)
Q Consensus 80 ~i~~~~k~~Ir~~Ll~~l~~~~~~ir~ql~~~i~~Ia~~d~P~~Wp~Ll~~l~~~l~s~---~~~~~L~~L~~i~k~~~~ 156 (1049)
.+++++|..||+.+++++.++++.||++++.+|+.|+++|||++||+|++.+++.++++ .++++|.+++++++++|+
T Consensus 77 ~l~~~~k~~ik~~ll~~l~~~~~~ir~~l~~~ia~ia~~d~p~~Wp~ll~~L~~~l~s~~~~~~~~aL~~l~~i~~~~~~ 156 (960)
T 1wa5_C 77 LLPANNVELIKKEIVPLMISLPNNLQVQIGEAISSIADSDFPDRWPTLLSDLASRLSNDDMVTNKGVLTVAHSIFKRWRP 156 (960)
T ss_dssp SSCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHSTTTCTTHHHHHHTTCCSSCTTHHHHHHHHHHHHHGGGTT
T ss_pred CCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 89989999999999999980879999999999999998617130157999999984789889999999999999999887
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH---HHCCCCC----HHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 8887654443221013564454059999999979999999997---5102996----46999999999998986540687
Q 001585 157 QPTDSTSMKGYRIYEFKSDEERTPVYRIVEETFHHLLNIFNRL---VQIVNPS----LEVADLIKLICKIFWSSIYLEIP 229 (1049)
Q Consensus 157 ~~~~~~~~~~~r~~~~~~~~~~~~l~~i~~~~~p~L~~~~~~~---~~~~~~~----~~~~~~~~~~lki~~~~~~~~lp 229 (1049)
.+++++.+.++..++...+|.+++++... +.....+ .....+++.++|+|+++++.++|
T Consensus 157 --------------~~~~~~~~~~l~~~l~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~k~~~~l~~~~~~ 222 (960)
T 1wa5_C 157 --------------LFRSDELFLEIKLVLDVFTAPFLNLLKTVDEQITANENNKASLNILFDVLLVLIKLYYDFNCQDIP 222 (960)
T ss_dssp --------------SCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCC--CHHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred --------------HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCH
T ss_conf --------------614847789999999998999999999999998735798799999999999999999998625655
Q ss_pred CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 11279234889999999970689999999999466521002789999999999999994898999833399999999963
Q 001585 230 KQLLDPNVFNAWMILFLNVLERPVPSEGEPADPEQRKSWGWWKVKKWTVHILNRLYTRFGDLKLQNPENRAFAQMFQKNY 309 (1049)
Q Consensus 230 ~~~~~~~~l~~w~~~~~~~l~~~~p~~~~~~d~~~~~~~~~~k~kk~~~~~l~~l~~~~~~~~~~~~~~~~f~~~f~~~~ 309 (1049)
..+. +++..|++.|.+++....|. ...|+++++..+||++|||+++++.+++.+|++ .| .++
T Consensus 223 ~~~~--~~~~~~~~~~~~~l~~~~p~--~~~d~d~~~~~~~~~vk~~~~~~l~~l~~~~~~-------------~f-~~~ 284 (960)
T 1wa5_C 223 EFFE--DNIQVGMGIFHKYLSYSNPL--LEDPDETEHASVLIKVKSSIQELVQLYTTRYED-------------VF-GPM 284 (960)
T ss_dssp HHHH--HTHHHHHHHHHHHHSCCSCC--CC------CCCHHHHHHHHHHHHHHHHHHHCHH-------------HH-HHH
T ss_pred HHHH--HHHHHHHHHHHHHHCCCCCC--CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-------------HH-HHH
T ss_conf 9999--98999999999997689985--557855331327999999999999999999899-------------99-999
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHCH--HHHHHHHHHHHHHCCCCCHHHHHHHHCCHHH
Q ss_conf 89999999999997528863598999999999995227802455404--3399999997641365693248644109789
Q 001585 310 AGKILECHLNLLNRIRVGGYLPDRVTNLILQYLSNSISKNSMYNLLQ--PRLDVLLFEIVFPLMCFNDNDQKLWDEDPHE 387 (1049)
Q Consensus 310 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~fl~~~~~~~~~~~~~~--~~l~~li~~ii~p~l~l~~~d~e~we~Dp~e 387 (1049)
++.+++.+|+.+.... ..+..++++..+++||.++++.+..++.++ +++..++..+++|+|+++++|++.|++||+|
T Consensus 285 ~~~~~~~~~~~l~~~~-~~~~~~~~~~~al~fl~~~~~~~~~~~~~~~~~~l~~li~~~i~~~m~~~~~d~e~w~~dp~e 363 (960)
T 1wa5_C 285 INEFIQITWNLLTSIS-NQPKYDILVSKSLSFLTAVTRIPKYFEIFNNESAMNNITEQIILPNVTLREEDVELFEDDPIE 363 (960)
T ss_dssp HHHHHHHHHHHHHHCC-SCTTSHHHHHHHHHHHHHHHTSHHHHGGGCSHHHHHHHHHHTHHHHHSCCGGGTTTTTTCHHH
T ss_pred HHHHHHHHHHHHHHCC-CCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHH
T ss_conf 9999999999998437-776728999999999999968676899876851899999999687348888789988449999
Q ss_pred HHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC-C
Q ss_conf 996706753444788889999999999740602099999999997412679976777732364999999999886121-7
Q 001585 388 YVRKGYDIIEDLYSPRTASMDFVSELVRKRGKENLQKFIQFIVGIFKRYDETPVEYKPYRQKDGALLAIGALCDKLKQ-T 466 (1049)
Q Consensus 388 fi~~~~d~~~d~~s~R~aa~~ll~~L~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~~~keaal~~lg~la~~l~~-~ 466 (1049)
|++++.|. +|.+++|.||.+++..++.++++.+++.+++++.+.++++.+++. .+|+.|||+++++|+++++... .
T Consensus 364 ~i~~d~e~-~d~~s~R~aa~~~L~~l~~~~~~~v~~~~l~~i~~~l~~~~~~~~--~~w~~reaal~algaia~~~~~~~ 440 (960)
T 1wa5_C 364 YIRRDLEG-SDTDTRRRACTDFLKELKEKNEVLVTNIFLAHMKGFVDQYMSDPS--KNWKFKDLYIYLFTALAINGNITN 440 (960)
T ss_dssp HHHHHHHC-----CHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHBSSCCBT
T ss_pred HHHHCCCC-CCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCC--HHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 99863575-512371889999999999970132789999999999987366961--217999999999999998741256
Q ss_pred CCC-----HHHHHHHHHHHHCCCCCCC---CCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHH
Q ss_conf 973-----3569999998322036798---74105999999997010566893379999999984189999735897999
Q 001585 467 EPY-----KSELERMLVQHVFPEFSSP---VGHLRAKAAWVAGQYAHINFSDQNNFRKALHSVVSGLRDPELPVRVDSVF 538 (1049)
Q Consensus 467 ~~~-----~~~~e~~l~~~v~p~l~~~---~~~lr~ra~~~l~~~~~~~f~~~~~~~~~~~~l~~~l~d~~~~V~~~Aa~ 538 (1049)
.+. ..++++|+.++++|.+.++ +|++|+||||++|+|+++. +++.+..+++.++++|.|++++||.+||.
T Consensus 441 ~~~~~~~~~~~l~~~l~~~v~p~l~~~~~~~p~vr~~a~~~lg~~~~~~--~~~~l~~~l~~l~~~L~d~~~~V~~~A~~ 518 (960)
T 1wa5_C 441 AGVSSTNNLLNVVDFFTKEIAPDLTSNNIPHIILRVDAIKYIYTFRNQL--TKAQLIELMPILATFLQTDEYVVYTYAAI 518 (960)
T ss_dssp TBCCCBCTTCCHHHHHHHHTHHHHHCSSCSCHHHHHHHHHHHHHTGGGS--CHHHHHHHHHHHHHHTTCSCHHHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHC--CHHHHHHHHHHHHHHHCCCCHHHHHHHHH
T ss_conf 7741234435699999997378744998888330398999999988658--99999999999999848997219999999
Q ss_pred HHHHHHHHCC---------CCCCCCCCHHHHHHHHHHHHHHH--------CHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
Q ss_conf 9999997134---------44210022299999999985111--------112599999999997067644428989999
Q 001585 539 ALRSFVEACR---------DLNEIRPILPQLLDEFFKLMNEV--------ENEDLVFTLETIVDKFGEEMAPYALGLCQN 601 (1049)
Q Consensus 539 aL~~~~~~~~---------~~~~l~p~l~~il~~Ll~ll~~~--------~~e~l~~~l~~iv~~~~~~i~p~~~~l~~~ 601 (1049)
||.+|++... .++.+.||++++++.|+.++++. +++.+..++..++..+++++.||+..+++.
T Consensus 519 Al~~~~~~~~~~~~~~~~~~~~~l~p~l~~ll~~L~~ll~~~~~~~~~~~~~e~l~~al~~vv~~~~~~~~p~~~~l~~~ 598 (960)
T 1wa5_C 519 TIEKILTIRESNTSPAFIFHKEDISNSTEILLKNLIALILKHGSSPEKLAENEFLMRSIFRVLQTSEDSIQPLFPQLLAQ 598 (960)
T ss_dssp HHHHHTTCBSCSSSCCBSSCGGGTTTTHHHHHHHHHHHHHTTCCCHHHHTSCHHHHHHHHHHHHHHTTTTGGGHHHHHHH
T ss_pred HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999844364446654435987564699999999999971467877643227999999999998888612479999999
Q ss_pred HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
Q ss_conf 99999999830248999998458899999999999998404883779978764899999980136224899999999997
Q 001585 602 LAAAFWRCMNTAEADEDADDPGALAAVGCLRAISTILESVSRLPHLFVQIEPTLLPIMRRMLTTDGQEVFEEVLEIVSYM 681 (1049)
Q Consensus 602 L~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~i~~ii~~~~~~~~~~~~l~~~~~p~i~~il~~~~~~~~e~~l~ll~~l 681 (1049)
|...+.+.+++ + +...+.++++++++.++++ ..|+.+..+++.++|++..+++++..+|.+++++++..+
T Consensus 599 L~~~l~~~~~~----~----~~~~~~~~~~e~l~~l~~~--~~~~~~~~~~~~~~p~~~~iL~~~~~~~~~~~~~i~~~l 668 (960)
T 1wa5_C 599 FIEIVTIMAKN----P----SNPRFTHYTFESIGAILNY--TQRQNLPLLVDSMMPTFLTVFSEDIQEFIPYVFQIIAFV 668 (960)
T ss_dssp HHHHHHHHTTS----C----CCHHHHHHHHHHHHHHHHT--SCGGGHHHHHHHHHHHHHHHHHTTCTTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHC----C----CCCHHHHHHHHHHHHHHHC--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999739----8----9727889999999999963--895369999999999999999860576699999999999
Q ss_pred HHCCCCCCHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 6029989987889899999--99755586248535886556761473333366886059999999999861899998634
Q 001585 682 TFFSPTISLEMWSLWPLMM--EALADWAIDFFPNILVPLDNYISRGTAHFLTCKEPDYQQSLWSMVSSIMADKNLEDGDI 759 (1049)
Q Consensus 682 ~~~~~~isp~l~~l~~~l~--~~~~~~~~~~l~~~~~~L~~~i~~~~~~~l~~~~~~~~~~i~~~~~~~l~~~~~~~~~~ 759 (1049)
+...++++|.+|++||.++ ..++.. ++++.++++|.+|+..+++.|.. ++.+++++.+++.++.. +
T Consensus 669 ~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~L~~~~~~~~~~~~~------~~~~l~~~~~~~~~~~~-~--- 736 (960)
T 1wa5_C 669 VEQSATIPESIKPLAQPLLAPNVWELK--GNIPAVTRLLKSFIKTDSSIFPD------LVPVLGIFQRLIASKAY-E--- 736 (960)
T ss_dssp HHHCSSCCTTTGGGHHHHTSGGGGCCT--TTHHHHHHHHHHHHHHHGGGCSC------SHHHHHHHHHHHTCTTT-H---
T ss_pred HHHCCCCCHHHHHHHHHHCCHHHHCCC--CCCHHHHHHHHHHHHHCHHHHHH------HHHHHHHHHHHHCCCCC-C---
T ss_conf 973547889999999998099985577--87355899999999768499999------99999999999679942-0---
Q ss_pred CCHHHHHHHHHHHCCCC-CHHCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHCHHHHHHHHHHHC--CCHH-HHH
Q ss_conf 72445999999854567-3020288999999999721244899-99999999987019799999999608--4099-999
Q 001585 760 EPAPKLIEVVFQNCKGQ-VDHWVEPYLRITVERLRRAEKSYLK-CLLVQVIADALYYNSSLTLSILHKLG--VATE-VFN 834 (1049)
Q Consensus 760 ~~a~~ll~~li~~~~~~-~~~~l~~il~~~l~~L~~~~~~~~~-~~~l~v~~~~~~~~p~~~l~~L~~~~--~~~~-~~~ 834 (1049)
..|+.+++.++.+++++ +.||++.++..++++++..++..++ ..++.+...+++|+|+.+++.+++.+ .+.. +++
T Consensus 737 ~~a~~ll~~i~~~~~~~~~~~yl~~i~~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~i~~~~f~~~~~~ 816 (960)
T 1wa5_C 737 VHGFDLLEHIMLLIDMNRLRPYIKQIAVLLLQRLQNSKTERYVKKLTVFFGLISNKLGSDFLIHFIDEVQDGLFQQIWGN 816 (960)
T ss_dssp HHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHGGGSSCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHTTSTTHHHHHHHH
T ss_pred CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHH
T ss_conf 35999999999979877789889999999999983177474999999999999987087999999984160589999999
Q ss_pred HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 99998999884054557642025698899999873126589991---368789999999999999999999720001688
Q 001585 835 LWFQMLQQVKKNGLRVNFKREHDKKVCCLGLTSLLALTADQLPG---EALGRVFRATLDLLVAYKEQVAEAAKDEEAEDD 911 (1049)
Q Consensus 835 ~w~~~~~~~~~~~~~~~~~~~~d~Kl~~lal~~Ll~~~~~~l~~---~~~~~~~~~~~~ll~~l~~~~~~~~~~~~~~~~ 911 (1049)
.|+..++ ++.+.+|||++++||++|+..+ ...|+ ..|+.++.++++++.+++++. ..
T Consensus 817 ~w~~~~~---------~~~~~~erk~~~~gl~~ll~~~-~~~~~~~~~~~~~~~~~i~~l~~~~~~~~--------~~-- 876 (960)
T 1wa5_C 817 FIITTLP---------TIGNLLDRKIALIGVLNMVING-QFFQSKYPTLISSTMNSIIETASSQSIAN--------LK-- 876 (960)
T ss_dssp THHHHGG---------GCCSHHHHHHHHHHHHHHHHSC-HHHHHHCGGGHHHHHHHHHHHHHSCSTTC--------SC--
T ss_pred HHCCCHH---------HCCCHHHHHHHHHHHHHHHHCC-CCCCHHHHHHHHHHHHHHHHHHHCCCCCC--------CC--
T ss_conf 8536603---------0167898999999999998651-22303578889999999999970876244--------67--
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC----CH
Q ss_conf 77689999998889999997878998777614689999999998423999999999889988877788989888----45
Q 001585 912 DDMDGFQTDDEDDDGDGSDKEMGVDAEDGDEADSIRLQKLAAQARAFRPHDEDDDDSDDDFSDDEELQSPIDEV----DP 987 (1049)
Q Consensus 912 ~~~~~~~~~~~~~d~~~~~~~~~~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~d~~~~~~pl~~v----d~ 987 (1049)
+++++++++|| .++++.. +.+|...+ + .-.||++++ |+
T Consensus 877 ---~~~~e~~d~~~--------------~~~~~~~-~~~L~~~~-----------~---------~~~dp~~~i~~~~d~ 918 (960)
T 1wa5_C 877 ---NDYVDLDNLEE--------------ISTFGSH-FSKLVSIS-----------E---------KPFDPLPEIDVNNGV 918 (960)
T ss_dssp ---CSCC-----CC--------------CCCTTCC-CCCCGGGC-----------C---------CCCCSCTTSCTTTHH
T ss_pred ---CCCCCCCCCCC--------------CCCCCHH-HHHHHHCC-----------C---------CCCCCHHHHCCCCCH
T ss_conf ---75332232100--------------1240168-89988187-----------8---------899983441576788
Q ss_pred HHHHHHHHHHHHHHCHHHHHHH-HCCCCHHHHHHHHHHHH
Q ss_conf 7999999999974090889998-63799999999999999
Q 001585 988 FVFFVDTIKVMQASDPLRFQNL-TQTLEFQYQALANGVAQ 1026 (1049)
Q Consensus 988 ~~~~~~~l~~~~~~~~~~~~~l-~~~l~~~~~~~l~~~~~ 1026 (1049)
+.||++.++++++++|+.|+.+ .++|++++|+.|+++++
T Consensus 919 ~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~l~~~~~ 958 (960)
T 1wa5_C 919 RLYVAEALNKYNAISGNTFLNTILPQLTQENQVKLNQLLV 958 (960)
T ss_dssp HHHHHHHHHHHHHHTTSCHHHHHGGGSCHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHC
T ss_conf 9999999999751397248899861699999999999872
No 2
>4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B*
Probab=1.00 E-value=1 Score=460.62 Aligned_cols=808 Identities=15% Similarity=0.185 Sum_probs=595.9
Q ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 589999999714999888999999999710698719999999971-4868346799999997756303788888868999
Q 001585 3 LPSLALILQGALSPNPEERKAAEHSLNQFQYTPQHLVRLLQIIVD-NNCDLSVRQVASIHFKNFIAKNWAPHEPNEQQKI 81 (1049)
Q Consensus 3 ~~~l~~~L~~tls~d~~~r~~AE~~L~~~~~~p~f~~~Ll~i~~~-~~~~~~iR~~Aai~lKn~I~~~W~~~~~~~~~~i 81 (1049)
+++|.++|++++|||+++|++||++|++++.+|+|..+|+.++.+ .+.+..+|++|+++|||.|+++|. .+
T Consensus 12 ~~~l~~~l~~~~s~d~~~r~~Ae~~L~~~~~~p~~~~~l~~il~~~~~~~~~vR~~a~~~Lkn~i~~~w~--------~~ 83 (852)
T 4fdd_A 12 LQQILQLLKESQSPDTTIQRTVQQKLEQLNQYPDFNNYLIFVLTKLKSEDEPTRSLSGLILKNNVKAHFQ--------NF 83 (852)
T ss_dssp HHHHHHHHHHHTCSCHHHHHHHHHHHHHHTTSHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHTTTSGG--------GC
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCC--------CC
T ss_conf 9999999998739498999999999999870998899999998566889867999999999998987447--------79
Q ss_pred CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHCCCCC
Q ss_conf 967899999999989611995889999999999997308998245799999971033---39889999999999501688
Q 001585 82 SQVDKDMVRDHILVFVAQVPPLLRVQLGECLKTIIHADYPEQWPHLLDWVKHNLQDQ---QVYGALFVLRILSRKYEYQP 158 (1049)
Q Consensus 82 ~~~~k~~Ir~~Ll~~l~~~~~~ir~ql~~~i~~Ia~~d~P~~Wp~Ll~~l~~~l~s~---~~~~~L~~L~~i~k~~~~~~ 158 (1049)
++++|..||+.++++|.++++.||++++.+++.|++.|+|+.||++++.+.+.++++ ..++++.+|..+++.++.
T Consensus 84 ~~~~~~~ik~~ll~~l~~~~~~vr~~~a~~i~~ia~~~~~~~wp~ll~~L~~~l~~~~~~~r~~al~~L~~i~~~~~~-- 161 (852)
T 4fdd_A 84 PNGVTDFIKSECLNNIGDSSPLIRATVGILITTIASKGELQNWPDLLPKLCSLLDSEDYNTCEGAFGALQKICEDSAE-- 161 (852)
T ss_dssp CHHHHHHHHHHHHTTTTCSSHHHHHHHHHHHHHHHHHTTTTTCTTHHHHHHHHHSCSSHHHHHHHHHHHHHHHHHHTT--
T ss_pred CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH--
T ss_conf 999999999999998749989999999999999998648135689999999987099989999999999999998578--
Q ss_pred CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
Q ss_conf 87654443221013564454059999999979999999997510299646999999999998986540687112792348
Q 001585 159 TDSTSMKGYRIYEFKSDEERTPVYRIVEETFHHLLNIFNRLVQIVNPSLEVADLIKLICKIFWSSIYLEIPKQLLDPNVF 238 (1049)
Q Consensus 159 ~~~~~~~~~r~~~~~~~~~~~~l~~i~~~~~p~L~~~~~~~~~~~~~~~~~~~~~~~~lki~~~~~~~~lp~~~~~~~~l 238 (1049)
.+.+...... +..++|.+++ .+.+. ...++..+++++..++.. .+..+. ..+
T Consensus 162 ------------~~~~~~~~~~----~~~il~~l~~----~l~~~-----~~~vR~~A~~aL~~~~~~-~~~~~~--~~~ 213 (852)
T 4fdd_A 162 ------------ILDSDVLDRP----LNIMIPKFLQ----FFKHS-----SPKIRSHAVACVNQFIIS-RTQALM--LHI 213 (852)
T ss_dssp ------------HHHHCSSSSC----HHHHHHHHTT----TTTCS-----SHHHHHHHHHHHHTTTTT-TCHHHH--TSH
T ss_pred ------------HHCHHHHCCH----HHHHHHHHHH----HHCCC-----CHHHHHHHHHHHHHHHHC-CCHHHH--HHH
T ss_conf ------------7563431332----9999999999----85679-----789999999999999864-638799--889
Q ss_pred HHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 89999999970689999999999466521002789999999999999994898999833399999999963899999999
Q 001585 239 NAWMILFLNVLERPVPSEGEPADPEQRKSWGWWKVKKWTVHILNRLYTRFGDLKLQNPENRAFAQMFQKNYAGKILECHL 318 (1049)
Q Consensus 239 ~~w~~~~~~~l~~~~p~~~~~~d~~~~~~~~~~k~kk~~~~~l~~l~~~~~~~~~~~~~~~~f~~~f~~~~~~~~~~~~~ 318 (1049)
..+++.+...++. .+ ..++++++.++..+...++. +..++++.+++.++
T Consensus 214 ~~~l~~l~~~~~d--------~~---------~~vr~~a~~~L~~l~~~~~~--------------~~~~~l~~l~~~l~ 262 (852)
T 4fdd_A 214 DSFIENLFALAGD--------EE---------PEVRKNVCRALVMLLEVRMD--------------RLLPHMHNIVEYML 262 (852)
T ss_dssp HHHHHHHHHHHTC--------CC---------HHHHHHHHHHHHHHHHHCHH--------------HHGGGHHHHHHHHH
T ss_pred HHHHHHHHHHCCC--------CC---------HHHHHHHHHHHHHHHHHCHH--------------HHHHHHHHHHHHHH
T ss_conf 9999999987179--------97---------78999999999999985779--------------89988999999999
Q ss_pred HHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHCCCCCC
Q ss_conf 99997528863598999999999995227802455404339999999764136569324864410978999670675344
Q 001585 319 NLLNRIRVGGYLPDRVTNLILQYLSNSISKNSMYNLLQPRLDVLLFEIVFPLMCFNDNDQKLWDEDPHEYVRKGYDIIED 398 (1049)
Q Consensus 319 ~~l~~~~~~~~~~~~~~~~~l~fl~~~~~~~~~~~~~~~~l~~li~~ii~p~l~l~~~d~e~we~Dp~efi~~~~d~~~d 398 (1049)
..+. ...+.++..+++||..+++.+..++.++|++..++.. +++.|+++++|.+.|+.|++|.- +.|+..+
T Consensus 263 ~~~~------~~~~~vr~~a~e~l~~l~~~~~~~~~~~~~~~~l~p~-ll~~l~~~e~d~~~~~~d~~ed~--~~dd~~~ 333 (852)
T 4fdd_A 263 QRTQ------DQDENVALEACEFWLTLAEQPICKDVLVRHLPKLIPV-LVNGMKYSDIDIILLKGDVEGGS--GGDDTIS 333 (852)
T ss_dssp HHHT------CSSHHHHHHHHHHHHHHTTSTTHHHHHTTTHHHHHHH-HHHHTSCCHHHHHHHHC--------------C
T ss_pred HHCC------CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH-HHHHCCCCHHHHHHHCCCCCCCC--CCCCCCC
T ss_conf 8706------9968999999999999860365798878889889999-99875786767998669844322--2456401
Q ss_pred CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
Q ss_conf 47888899999999997406020999999999974126799767777323649999999998861217973356999999
Q 001585 399 LYSPRTASMDFVSELVRKRGKENLQKFIQFIVGIFKRYDETPVEYKPYRQKDGALLAIGALCDKLKQTEPYKSELERMLV 478 (1049)
Q Consensus 399 ~~s~R~aa~~ll~~L~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~~~keaal~~lg~la~~l~~~~~~~~~~e~~l~ 478 (1049)
.+++|.+|...+..++...++.+++.+++++.+.+++ .+|+.|++++.++|.+++++.+. ....++.+ .
T Consensus 334 ~~~vr~~a~~~L~~la~~~~~~~~~~l~~~l~~~l~~--------~~~~~R~aa~~alg~i~~~~~~~--~~~~l~~~-l 402 (852)
T 4fdd_A 334 DWNLRKCSAAALDVLANVYRDELLPHILPLLKELLFH--------HEWVVKESGILVLGAIAEGCMQG--MIPYLPEL-I 402 (852)
T ss_dssp CCCHHHHHHHHHHHHHHHHGGGGHHHHHHHHHHHHTC--------SSHHHHHHHHHHHHHTTTTTHHH--HGGGHHHH-H
T ss_pred CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC--------CCHHHHHHHHHHHHHHHHCCHHH--HHHHHHHH-H
T ss_conf 1169999999999998746187899999999998559--------98899999999999998635688--99879999-9
Q ss_pred HHHCCCCCCCCCCHHHHHHHHHHHHHCCCC--CCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 832203679874105999999997010566--893379999999984189999735897999999999713444210022
Q 001585 479 QHVFPEFSSPVGHLRAKAAWVAGQYAHINF--SDQNNFRKALHSVVSGLRDPELPVRVDSVFALRSFVEACRDLNEIRPI 556 (1049)
Q Consensus 479 ~~v~p~l~~~~~~lr~ra~~~l~~~~~~~f--~~~~~~~~~~~~l~~~l~d~~~~V~~~Aa~aL~~~~~~~~~~~~l~p~ 556 (1049)
..+++.+.++++.+|..|||++|+++++.- .....+..+++.++..+.|++..||..|+.||..+++.. ...+.||
T Consensus 403 ~~l~~~l~d~~~~Vr~~a~~~l~~l~~~~~~~~~~~~~~~ll~~L~~~L~d~~~~vr~~a~~aL~~l~~~~--~~~l~~~ 480 (852)
T 4fdd_A 403 PHLIQCLSDKKALVRSITCWTLSRYAHWVVSQPPDTYLKPLMTELLKRILDSNKRVQEAACSAFATLEEEA--CTELVPY 480 (852)
T ss_dssp HHHHHHTTCSSHHHHHHHHHHHHHTHHHHHHSCTTTTHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHH--GGGGGGG
T ss_pred HHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH--HHHHHHH
T ss_conf 99998717998899999999999999886110478999999999999985898889999999999999973--6766767
Q ss_pred HHHHHHHHHHHHHHHCHHH---HHHHHHHHHHHCCCCCC--CCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
Q ss_conf 2999999999851111125---99999999997067644--428989999999999998302489999984588999999
Q 001585 557 LPQLLDEFFKLMNEVENED---LVFTLETIVDKFGEEMA--PYALGLCQNLAAAFWRCMNTAEADEDADDPGALAAVGCL 631 (1049)
Q Consensus 557 l~~il~~Ll~ll~~~~~e~---l~~~l~~iv~~~~~~i~--p~~~~l~~~L~~~~~~~~~~~~~d~~~~~~~~~~~~~~l 631 (1049)
++.+++.|+.+++..+... +..++..++...++.+. +|...+++.|. +.|+.-.++ ++.+. .++
T Consensus 481 l~~ll~~L~~~l~~~~~~~~~~~~~ai~~l~~~~~~~~~~~~~~~~l~p~l~----~~~~~l~d~-----~~~~~--~~~ 549 (852)
T 4fdd_A 481 LAYILDTLVFAFSKYQHKNLLILYDAIGTLADSVGHHLNKPEYIQMLMPPLI----QKWNMLKDE-----DKDLF--PLL 549 (852)
T ss_dssp HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHGGGGCCHHHHHHHHHHHH----HHHHHSCTT-----CTTHH--HHH
T ss_pred HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH----HHHHHCCCC-----CHHHH--HHH
T ss_conf 9999999999998837479999999999999974243136789999889999----998733304-----69999--999
Q ss_pred HHHHHHHHHHCCC-HHHHHHHHHHHHHHHHHHCC-------------CCHHHHHHHHHHHHHHHHHCC-CCCCHHH--HH
Q ss_conf 9999999840488-37799787648999999801-------------362248999999999976029-9899878--89
Q 001585 632 RAISTILESVSRL-PHLFVQIEPTLLPIMRRMLT-------------TDGQEVFEEVLEIVSYMTFFS-PTISLEM--WS 694 (1049)
Q Consensus 632 ~~i~~ii~~~~~~-~~~~~~l~~~~~p~i~~il~-------------~~~~~~~e~~l~ll~~l~~~~-~~isp~l--~~ 694 (1049)
++++.+..+++.. ......+.+.++.++...+. .+..++...++++++.++... ..+.|.+ -.
T Consensus 550 ~~l~~i~~~~g~~~~~~~~~i~~~~~~~l~~~l~~~~~~~~~~~~~~~~d~~~~~~~l~~l~~l~~~l~~~~~~~~~~~~ 629 (852)
T 4fdd_A 550 ECLSSVATALQSGFLPYCEPVYQRCVNLVQKTLAQAMLNNAQPDQYEAPDKDFMIVALDLLSGLAEGLGGNIEQLVARSN 629 (852)
T ss_dssp HHHHHHHHHHGGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTTSCCCCTHHHHHHHHHHHHHHHHHGGGGHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 99999999974867988999999999999999999987533886668876119999999997899987476998836771
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCC
Q ss_conf 89999999755586248535886556761473333366886059999999999861899998634724459999998545
Q 001585 695 LWPLMMEALADWAIDFFPNILVPLDNYISRGTAHFLTCKEPDYQQSLWSMVSSIMADKNLEDGDIEPAPKLIEVVFQNCK 774 (1049)
Q Consensus 695 l~~~l~~~~~~~~~~~l~~~~~~L~~~i~~~~~~~l~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~~a~~ll~~li~~~~ 774 (1049)
+++.+..++.+...+.......++..+....+..+. .|+..++..+.+.+... +.+.+..++..+..+..+.+
T Consensus 630 ~~~~l~~~l~~~~~~vr~~a~~~l~~l~~~~~~~~~-----~~l~~~lp~l~~~l~~~--~~~v~~~a~~alg~i~~~~~ 702 (852)
T 4fdd_A 630 ILTLMYQCMQDKMPEVRQSSFALLGDLTKACFQHVK-----PCIADFMPILGTNLNPE--FISVCNNATWAIGEISIQMG 702 (852)
T ss_dssp HHHHHHHHTTCSSHHHHHHHHHHHHHHHHHCGGGTG-----GGHHHHHHHHHHTCCTT--SHHHHHHHHHHHHHHHHHHG
T ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHCCCC--CHHHHHHHHHHHHHHHHHHH
T ss_conf 899999983899844999999999999998168889-----87999999999876942--06899999999999999711
Q ss_pred CCCHHCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 6730202889999999997212-448999999999998701979999999960840999999999899988405455764
Q 001585 775 GQVDHWVEPYLRITVERLRRAE-KSYLKCLLVQVIADALYYNSSLTLSILHKLGVATEVFNLWFQMLQQVKKNGLRVNFK 853 (1049)
Q Consensus 775 ~~~~~~l~~il~~~l~~L~~~~-~~~~~~~~l~v~~~~~~~~p~~~l~~L~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~ 853 (1049)
..+.||+..++..++..+.+.. ...++...+..+.++...+|+.+-.. +..|+..|+..++ +..
T Consensus 703 ~~~~p~~~~il~~L~~~l~~~~~~~~~~~~a~~~igrl~~~~~~~~~~~------l~~~~~~~~~~l~---------~~~ 767 (852)
T 4fdd_A 703 IEMQPYIPMVLHQLVEIINRPNTPKTLLENTAITIGRLGYVCPQEVAPM------LQQFIRPWCTSLR---------NIR 767 (852)
T ss_dssp GGGGGGTHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHHHHCHHHHGGG------HHHHHHHHHHHHH---------TSC
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCHHHHCCC------HHHHHHHHHHHHC---------CCC
T ss_conf 7678789999999999857998872077889999999998688976755------8999999999865---------366
Q ss_pred CCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 20256988999998731265899913687899999999999999999997200016887768999999888999999787
Q 001585 854 REHDKKVCCLGLTSLLALTADQLPGEALGRVFRATLDLLVAYKEQVAEAAKDEEAEDDDDMDGFQTDDEDDDGDGSDKEM 933 (1049)
Q Consensus 854 ~~~d~Kl~~lal~~Ll~~~~~~l~~~~~~~~~~~~~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 933 (1049)
...+|..+.-|+|.++..+|+.+.+ .++..+. ++.. |.
T Consensus 768 d~~e~~~a~~~l~~li~~~p~~~~~--------~~~~~~~----~~~~---------------~~--------------- 805 (852)
T 4fdd_A 768 DNEEKDSAFRGICTMISVNPSGVIQ--------DFIFFCD----AVAS---------------WI--------------- 805 (852)
T ss_dssp SSHHHHHHHHHHHHHHHHCGGGTGG--------GHHHHHH----HHHT---------------CS---------------
T ss_pred CCHHHHHHHHHHHHHHHHCHHHHHH--------HHHHHHH----HHHH---------------CC---------------
T ss_conf 6079999999999999869186888--------8999999----9870---------------68---------------
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCH-HHHHHHHCC
Q ss_conf 8998777614689999999998423999999999889988877788989888457999999999974090-889998637
Q 001585 934 GVDAEDGDEADSIRLQKLAAQARAFRPHDEDDDDSDDDFSDDEELQSPIDEVDPFVFFVDTIKVMQASDP-LRFQNLTQT 1012 (1049)
Q Consensus 934 ~~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~d~~~~~~pl~~vd~~~~~~~~l~~~~~~~~-~~~~~l~~~ 1012 (1049)
+| .-|....|.+.+..++++-| +.++...++
T Consensus 806 ----------------------------------------------~~--~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~ 837 (852)
T 4fdd_A 806 ----------------------------------------------NP--KDDLRDMFCKILHGFKNQVGDENWRRFSDQ 837 (852)
T ss_dssp ----------------------------------------------SC--CHHHHHHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred ----------------------------------------------CC--CHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
T ss_conf ----------------------------------------------99--789999999999999876772019999872
Q ss_pred CCHHHHHHHHHH
Q ss_conf 999999999999
Q 001585 1013 LEFQYQALANGV 1024 (1049)
Q Consensus 1013 l~~~~~~~l~~~ 1024 (1049)
++++.++.|+..
T Consensus 838 ~~~~~~~~l~~~ 849 (852)
T 4fdd_A 838 FPLPLKERLAAF 849 (852)
T ss_dssp CCHHHHHHHHHT
T ss_pred CCHHHHHHHHHH
T ss_conf 999999999987
No 3
>3m1i_C Exportin-1; heat repeat, GTP-binding, nucleotide-binding, NUCL protein transport, transport, cytoplasm, GTPase activation; HET: GTP; 2.00A {Saccharomyces cerevisiae} PDB: 2l1l_B
Probab=1.00 E-value=1 Score=426.97 Aligned_cols=744 Identities=11% Similarity=0.145 Sum_probs=477.9
Q ss_pred CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 99589999999714999888999999999710698719999999971486834679999999775630378888886899
Q 001585 1 MDLPSLALILQGALSPNPEERKAAEHSLNQFQYTPQHLVRLLQIIVDNNCDLSVRQVASIHFKNFIAKNWAPHEPNEQQK 80 (1049)
Q Consensus 1 md~~~l~~~L~~tls~d~~~r~~AE~~L~~~~~~p~f~~~Ll~i~~~~~~~~~iR~~Aai~lKn~I~~~W~~~~~~~~~~ 80 (1049)
||+++|.++|.++++|++++|++||++|++++++|+++..+.+++.+.. +..+|++|+++|||.|+++|. .
T Consensus 13 ~~~~~l~~~l~~~~~p~~~~r~~Ae~~L~~~~~~p~~~~~l~~iL~~s~-~~~vr~~aa~~Lk~~i~~~W~--------~ 83 (1049)
T 3m1i_C 13 LDIALLDQVVSTFYQGSGVQQKQAQEILTKFQDNPDAWQKADQILQFST-NPQSKFIALSILDKLITRKWK--------L 83 (1049)
T ss_dssp CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHSTTGGGGHHHHHHHCS-CHHHHHHHHHHHHHHHHHTGG--------G
T ss_pred CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHHHHCC--------C
T ss_conf 6599999999998689938999999999998839569999999986299-889999999999999976070--------4
Q ss_pred CCHHHHHHHHHHHHHHHHCC---------CHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH--HHHHHHHHHHH
Q ss_conf 99678999999999896119---------95889999999999997308998245799999971033--39889999999
Q 001585 81 ISQVDKDMVRDHILVFVAQV---------PPLLRVQLGECLKTIIHADYPEQWPHLLDWVKHNLQDQ--QVYGALFVLRI 149 (1049)
Q Consensus 81 i~~~~k~~Ir~~Ll~~l~~~---------~~~ir~ql~~~i~~Ia~~d~P~~Wp~Ll~~l~~~l~s~--~~~~~L~~L~~ 149 (1049)
+++++|..||+.+++.+... ++.||++++.+++.|+++|||++||++++.+++.++++ ...+++.+|..
T Consensus 84 l~~~~~~~ir~~ll~~l~~~~~~~~~~~~~~~i~~kl~~~ia~Ia~~~~p~~Wp~ll~~L~~~~~~~~~~~~~~l~~L~~ 163 (1049)
T 3m1i_C 84 LPNDHRIGIRNFVVGMIISMCQDDEVFKTQKNLINKSDLTLVQILKQEWPQNWPEFIPELIGSSSSSVNVCENNMIVLKL 163 (1049)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHCHHHHHHCHHHHHHHHHHHHHHHHHHTTTTCTTHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH
T ss_conf 99999999999999999862776200000289999999999999997681115479999999871585889999999999
Q ss_pred HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH-CCC
Q ss_conf 9995016888765444322101356445405999999997999999999751029964699999999999898654-068
Q 001585 150 LSRKYEYQPTDSTSMKGYRIYEFKSDEERTPVYRIVEETFHHLLNIFNRLVQIVNPSLEVADLIKLICKIFWSSIY-LEI 228 (1049)
Q Consensus 150 i~k~~~~~~~~~~~~~~~r~~~~~~~~~~~~l~~i~~~~~p~L~~~~~~~~~~~~~~~~~~~~~~~~lki~~~~~~-~~l 228 (1049)
++.....+.. +......+.++...+...+|.++.++.+.+.... + ..++..+++++.+++. .+.
T Consensus 164 l~eev~~~~~-----------~~~~~~r~~~lk~~l~~~~~~i~~~~~~~l~~~~-~---~~~~~~aL~~l~~~l~wi~~ 228 (1049)
T 3m1i_C 164 LSEEVFDFSA-----------EQMTQAKALHLKNSMSKEFEQIFKLCFQVLEQGS-S---SSLIVATLESLLRYLHWIPY 228 (1049)
T ss_dssp HHHHHHTSCT-----------TTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-C---HHHHHHHHHHHHHHTTTSCT
T ss_pred HHHHHHHHCC-----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-C---HHHHHHHHHHHHHHHHHCCH
T ss_conf 9999987260-----------0132689999999999999999999999998668-8---89999999999999860889
Q ss_pred CCCC-------------CCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHH----------
Q ss_conf 7112-------------79234889999999970689999999999466521002789999999999999----------
Q 001585 229 PKQL-------------LDPNVFNAWMILFLNVLERPVPSEGEPADPEQRKSWGWWKVKKWTVHILNRLY---------- 285 (1049)
Q Consensus 229 p~~~-------------~~~~~l~~w~~~~~~~l~~~~p~~~~~~d~~~~~~~~~~k~kk~~~~~l~~l~---------- 285 (1049)
+..+ .+++....|+..+..+++...+. .+... ..++.++.-.++..+.
T Consensus 229 ~~~~~~~ll~~l~~~~l~~~~~~~~a~~~L~~i~~~~~~~----~~~~~-----~~~~~~l~~~~l~~l~~si~p~~~~l 299 (1049)
T 3m1i_C 229 RYIYETNILELLSTKFMTSPDTRAITLKCLTEVSNLKIPQ----DNDLI-----KRQTVLFFQNTLQQIATSVMPVTADL 299 (1049)
T ss_dssp HHHHSSSHHHHHHTHHHHSHHHHHHHHHHHHHHHHCCCCT----TCHHH-----HHHHHHHHHHHHHHHHHHTCCTTSCH
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCC----CHHHH-----HHHHHHHHHHHHHHHHHHHCCCCCCH
T ss_conf 9886055999999986898767999999999999488995----03468-----89999999999999988627985417
Q ss_pred -HHHCCCCCCCHHH-HHHHHHHH---HHH---------HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCC----
Q ss_conf -9948989998333-99999999---963---------89999999999997528863598999999999995227----
Q 001585 286 -TRFGDLKLQNPEN-RAFAQMFQ---KNY---------AGKILECHLNLLNRIRVGGYLPDRVTNLILQYLSNSIS---- 347 (1049)
Q Consensus 286 -~~~~~~~~~~~~~-~~f~~~f~---~~~---------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~fl~~~~~---- 347 (1049)
..|+.+...+.++ ..+++.|. ..+ ..+.+..++..+-.... ...+.+...+++||..+++
T Consensus 300 ~~~~~~~~~~d~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ll~~~~--~~d~~v~~~~lefw~~l~~~l~~ 377 (1049)
T 3m1i_C 300 KATYANANGNDQSFLQDLAMFLTTYLARNRALLESDESLRELLLNAHQYLIQLSK--IEERELFKTTLDYWHNLVADLFY 377 (1049)
T ss_dssp HHHHHHTCTTHHHHHHHHHHHHHHHHHHHHHHHHSCGGGHHHHHHHHHHHHHHHT--SSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 8774457710289999999999999999999982882147999999999999886--89089999999999999999974
Q ss_pred CCHHHHHCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHH
Q ss_conf 80245540433999999976413656932486441097899967067534447888899999999997406020999999
Q 001585 348 KNSMYNLLQPRLDVLLFEIVFPLMCFNDNDQKLWDEDPHEYVRKGYDIIEDLYSPRTASMDFVSELVRKRGKENLQKFIQ 427 (1049)
Q Consensus 348 ~~~~~~~~~~~l~~li~~ii~p~l~l~~~d~e~we~Dp~efi~~~~d~~~d~~s~R~aa~~ll~~L~~~~~~~~~~~l~~ 427 (1049)
.+..+..+++++..++. ++++.|++.+ |.+.+++|+.|++++..++. |.++.|.++.++|..++..++..+++.+++
T Consensus 378 ~~~~~~~~~~~l~~Lv~-~ll~~m~~~e-d~~~~~dd~~e~~r~~~~d~-d~~~~~~~~~~~L~~l~~~~~~~~l~~v~~ 454 (1049)
T 3m1i_C 378 EPLKKHIYEEICSQLRL-VIIENMVRPE-EVLVVENDEGEIVREFVKES-DTIQLYKSEREVLVYLTHLNVIDTEEIMIS 454 (1049)
T ss_dssp STTCGGGGHHHHHHHHH-HHHHTCCCCT-TCCEEECTTSCEEECSSCCH-HHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHH-HHHHHCCCCC-CEEEEECCCCCCHHHHHCCC-HHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
T ss_conf 63589999999999999-9998658996-20000579985048653122-279999999999999883698999999999
Q ss_pred HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC--CCCHHHHHHHHHHHHCCCCC---CCCCCHHHHHHHHHHH
Q ss_conf 999974126799767777323649999999998861217--97335699999983220367---9874105999999997
Q 001585 428 FIVGIFKRYDETPVEYKPYRQKDGALLAIGALCDKLKQT--EPYKSELERMLVQHVFPEFS---SPVGHLRAKAAWVAGQ 502 (1049)
Q Consensus 428 ~i~~~l~~~~~~~~~~~~~~~keaal~~lg~la~~l~~~--~~~~~~~e~~l~~~v~p~l~---~~~~~lr~ra~~~l~~ 502 (1049)
++.+.++. + ..+|+.+||+++++|++++.+.+. +.+..++.+++.+ +|++. +++|.+|.++||++|+
T Consensus 455 ~l~~~l~~----~--~~~W~~~eaal~algsia~~~~~~~e~~~l~~v~~~l~~--l~~~~~~~~~~~~v~~~~~~~lgr 526 (1049)
T 3m1i_C 455 KLARQIDG----S--EWSWHNINTLSWAIGSISGTMSEDTEKRFVVTVIKDLLD--LTVKKRGKDNKAVVASDIMYVVGQ 526 (1049)
T ss_dssp HHHHHHTS----S--SCCHHHHHHHHHHHHHTTTSSCHHHHHHHHHHHHHHHHH--HTTSSCSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHCC----C--CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH--HHHHHCCCCCHHHHHHHHHHHHHH
T ss_conf 99987277----8--789899999999999986023762557999999999998--776543566549999889999997
Q ss_pred HHCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC--------CCCHHHHHHHHHHHHHHHCHH
Q ss_conf 010566893379999999984189999735897999999999713444210--------022299999999985111112
Q 001585 503 YAHINFSDQNNFRKALHSVVSGLRDPELPVRVDSVFALRSFVEACRDLNEI--------RPILPQLLDEFFKLMNEVENE 574 (1049)
Q Consensus 503 ~~~~~f~~~~~~~~~~~~l~~~l~d~~~~V~~~Aa~aL~~~~~~~~~~~~l--------~p~l~~il~~Ll~ll~~~~~e 574 (1049)
|+++...+++.+..+++.++.+|.+++++|+..||.|+.+|++.+. ..+ .||++++++.+..+++..+.+
T Consensus 527 y~~~~~~~~~~l~~vl~~ll~~l~~~~~~V~~~A~~al~~l~~~~~--~~l~~~~~~~~~p~~~~il~~l~~~~~~~~~~ 604 (1049)
T 3m1i_C 527 YPRFLKAHWNFLRTVILKLFEFMHETHEGVQDMACDTFIKIVQKCK--YHFVIQQPRESEPFIQTIIRDIQKTTADLQPQ 604 (1049)
T ss_dssp CHHHHHHCHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHT--HHHHSCCTTCSSCHHHHHHHTHHHHHTTSCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH--HHHHCCCCCCCCCHHHHHHHHHHHHHHHCCHH
T ss_conf 7999986789999999999998618987899999999999999988--98611567787757999999899999858999
Q ss_pred HHHHHHHHH---HHHCC--CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC--CCHHHHHHHHHHHHHHHHHHHHCCCHHH
Q ss_conf 599999999---99706--7644428989999999999998302489999--9845889999999999999840488377
Q 001585 575 DLVFTLETI---VDKFG--EEMAPYALGLCQNLAAAFWRCMNTAEADEDA--DDPGALAAVGCLRAISTILESVSRLPHL 647 (1049)
Q Consensus 575 ~l~~~l~~i---v~~~~--~~i~p~~~~l~~~L~~~~~~~~~~~~~d~~~--~~~~~~~~~~~l~~i~~ii~~~~~~~~~ 647 (1049)
....+++++ +...+ +...+|...+++.+.+.+.++..+...+++. +.+.......+++|+..++.+++.
T Consensus 605 ~~~~~~eai~~ii~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~l~~~~~~~~~l~~---- 680 (1049)
T 3m1i_C 605 QVHTFYKACGIIISEERSVAERNRLLSDLMQLPNMAWDTIVEQSTANPTLLLDSETVKIIANIIKTNVAVCTSMGA---- 680 (1049)
T ss_dssp HHHHHHHHHHHHHHTCCSHHHHHHHHHHHTHHHHHHHHHHHHHHHHCGGGGGSHHHHHHHHHHHHHHHHHHHHHGG----
T ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCHHHHHHHHHHHHHHHHHHHHHHH----
T ss_conf 9999999999999759978999999999998899999999998731646404879999999999999999998567----
Q ss_pred HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH-CCC--CCCHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 997876489999998013622489999999999760-299--8998788---9899999997555862485358865567
Q 001585 648 FVQIEPTLLPIMRRMLTTDGQEVFEEVLEIVSYMTF-FSP--TISLEMW---SLWPLMMEALADWAIDFFPNILVPLDNY 721 (1049)
Q Consensus 648 ~~~l~~~~~p~i~~il~~~~~~~~e~~l~ll~~l~~-~~~--~isp~l~---~l~~~l~~~~~~~~~~~l~~~~~~L~~~ 721 (1049)
.+.|.+..++. +...++.....++..... ... ...|..| .+.|.+.+.+..+ ...+ ++++..
T Consensus 681 ------~f~p~~~~i~~-~~l~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~l~~ll~~~----~~~~-~~l~~~ 748 (1049)
T 3m1i_C 681 ------DFYPQLGHIYY-NMLQLYRAVSSMISAQVAAEGLIATKTPKVRGLRTIKKEILKLVETY----ISKA-RNLDDV 748 (1049)
T ss_dssp ------GGHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHCGGGGGSHHHHHHHHHHHHHHHHHHHH----HHHC-SCHHHH
T ss_pred ------HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH----HHHC-CCHHHH
T ss_conf ------88999999999-99999999999899999705850221088999999999999999999----9847-977999
Q ss_pred HHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHCHHHHHHHHHHHHHH------H
Q ss_conf 6147333336688605999999999986189999863472445999999854567302028899999999972------1
Q 001585 722 ISRGTAHFLTCKEPDYQQSLWSMVSSIMADKNLEDGDIEPAPKLIEVVFQNCKGQVDHWVEPYLRITVERLRR------A 795 (1049)
Q Consensus 722 i~~~~~~~l~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~~a~~ll~~li~~~~~~~~~~l~~il~~~l~~L~~------~ 795 (1049)
+ ..++ ++.++.+++.+.+.... ..+ ..++.++..++..+++.+.++++.++..++.+.-. .
T Consensus 749 ~----~~~~----~~~l~~ll~~~~~~~~~--~~~---~~~l~l~~~ii~~~~~~~~~~l~~i~~~l~~~~~~~i~~~~~ 815 (1049)
T 3m1i_C 749 V----KVLV----EPLLNAVLEDYMNNVPD--ARD---AEVLNCMTTVVEKVGHMIPQGVILILQSVFECTLDMINKDFT 815 (1049)
T ss_dssp H----HHTH----HHHHHHHHHHHHHSCGG--GCC---THHHHHHHHHHHHHGGGCHHHHHHHHHHHHHHHHHHHSSCSS
T ss_pred H----HHHH----HHHHHHHHHHHHHCCCC--CCC---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
T ss_conf 9----9878----99999999988718963--236---879999999999988760666899999999999999852421
Q ss_pred HHHHHHHHHHHHHHHHHHHCHHHHHH
Q ss_conf 24489999999999987019799999
Q 001585 796 EKSYLKCLLVQVIADALYYNSSLTLS 821 (1049)
Q Consensus 796 ~~~~~~~~~l~v~~~~~~~~p~~~l~ 821 (1049)
..+.++..++.++.+++..+|..+++
T Consensus 816 ~~pd~~~~~f~ll~~i~~~~~~~l~~ 841 (1049)
T 3m1i_C 816 EYPEHRVEFYKLLKVINEKSFAAFLE 841 (1049)
T ss_dssp SSHHHHHHHHHHHHHHHHHCTHHHHH
T ss_pred HCHHHHHHHHHHHHHHHHHCHHHHHC
T ss_conf 08999999999999999867899975
No 4
>2x1g_F Cadmus; transport protein, developmental protein, mRNA processing, nuclear transport, mRNA splicing, mRNA transport; 3.35A {Drosophila melanogaster}
Probab=1.00 E-value=1 Score=412.87 Aligned_cols=722 Identities=13% Similarity=0.154 Sum_probs=481.6
Q ss_pred CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 99589999999714999888999999999710698719999999971486834679999999775630378888886899
Q 001585 1 MDLPSLALILQGALSPNPEERKAAEHSLNQFQYTPQHLVRLLQIIVDNNCDLSVRQVASIHFKNFIAKNWAPHEPNEQQK 80 (1049)
Q Consensus 1 md~~~l~~~L~~tls~d~~~r~~AE~~L~~~~~~p~f~~~Ll~i~~~~~~~~~iR~~Aai~lKn~I~~~W~~~~~~~~~~ 80 (1049)
||+++|.+++.++++||++.|++||++|++++++|+++..+.+|+... .+..+|++|++.|||.|+++|. .
T Consensus 4 ~d~~~l~~~l~~~~~~d~~~r~~A~~~L~~~~~~p~~w~~~~~lL~~~-~~~~vr~~aa~~L~~~i~~~w~--------~ 74 (971)
T 2x1g_F 4 IDIARLEEAVVSFYRSNSQNQAITHEWLTDAEASPQAWQFSWQLMQLG-KSQEVQFFGAITLHSKLMKHWH--------E 74 (971)
T ss_dssp -------CTHHHHHTSTTTC----CHHHHHTTTSTHHHHHHHHHTCTT-SCHHHHHHHHHHHHHHHHHCGG--------G
T ss_pred HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHHHHCCHH--------H
T ss_conf 559999999998769999999999999999874979899999998359-9498999999999999971586--------4
Q ss_pred CCHHHHHHHHHHHHHHHHC---CCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH-------H--HHHHHHHHHH
Q ss_conf 9967899999999989611---99588999999999999730899824579999997103-------3--3988999999
Q 001585 81 ISQVDKDMVRDHILVFVAQ---VPPLLRVQLGECLKTIIHADYPEQWPHLLDWVKHNLQD-------Q--QVYGALFVLR 148 (1049)
Q Consensus 81 i~~~~k~~Ir~~Ll~~l~~---~~~~ir~ql~~~i~~Ia~~d~P~~Wp~Ll~~l~~~l~s-------~--~~~~~L~~L~ 148 (1049)
+|+++|..||+.+++.+.+ .++.||++++.+++.|++++|| .||++++.+++.+++ + ....++.+|.
T Consensus 75 l~~~~~~~ir~~ll~~l~~~~~~~~~vr~kl~~~la~i~~~~~p-~Wp~~l~~l~~~~~~~~~~~~~~~~~~~~~l~iL~ 153 (971)
T 2x1g_F 75 VPPENREELKQKILESIVRFAGGPKIVLNRLCISLGAYIVHMLG-EWPGAIEEVINTFQNQRMPNVSADVQLWIMLEVLT 153 (971)
T ss_dssp CCGGGHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTTC-C------HHHHHHHHTC----CHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC-CCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
T ss_conf 99999999999999999986799878999999999999997062-24379999999971533456787889999999999
Q ss_pred HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC---CHHHHHHHHHHHHHHHHHHH
Q ss_conf 999950168887654443221013564454059999999979999999997510299---64699999999999898654
Q 001585 149 ILSRKYEYQPTDSTSMKGYRIYEFKSDEERTPVYRIVEETFHHLLNIFNRLVQIVNP---SLEVADLIKLICKIFWSSIY 225 (1049)
Q Consensus 149 ~i~k~~~~~~~~~~~~~~~r~~~~~~~~~~~~l~~i~~~~~p~L~~~~~~~~~~~~~---~~~~~~~~~~~lki~~~~~~ 225 (1049)
.++++.. +++....|..+...+...+|.+++++.+.+..... +.....++..+++|+.+++.
T Consensus 154 ~l~EEi~---------------~~~~~~~r~~~~~~l~~~~~~vl~ll~~~l~~~~~~~~~~~~~~~~~~al~~l~~~~~ 218 (971)
T 2x1g_F 154 AIPEEAQ---------------VIHTSVKRVVLRAEIAKRVQLVIHTVERYLKLQMNRVWDAEAYSNMNRAVKCVGTWIK 218 (971)
T ss_dssp HHHHHHH---------------HCCCSSCHHHHHHHHHTTHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHH---------------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 8599882---------------4685789999999999879999999999985546788886423679999999999982
Q ss_pred C-CCCCCCCCHHHHHHHHHHHHH----------------------------------HHCCCCCCCCCCCCHHHH-----
Q ss_conf 0-687112792348899999999----------------------------------706899999999994665-----
Q 001585 226 L-EIPKQLLDPNVFNAWMILFLN----------------------------------VLERPVPSEGEPADPEQR----- 265 (1049)
Q Consensus 226 ~-~lp~~~~~~~~l~~w~~~~~~----------------------------------~l~~~~p~~~~~~d~~~~----- 265 (1049)
. .+|.. ....+++.+.. +++.+.+ .+....
T Consensus 219 ~~~ip~~-----~~~~ll~~l~~L~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~i~~~~~~-----~~~~~~~~~l~ 288 (971)
T 2x1g_F 219 NIGYTIE-----GCVTITAVLLEVVHKCYWPCIHAGDGCMTADENELAESCLKTMVNIIIQPDC-----HNYPKTAFVLI 288 (971)
T ss_dssp HSCCCGG-----GHHHHHHHHHHHHHHHHSSSCC---CCCCHHHHHHHHHHHHHHHHHHHCSGG-----GGCHHHHHHHH
T ss_pred HCCCCCC-----CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC-----CCCHHHHHHHH
T ss_conf 5783865-----6631999998643553023235665556767747999999999999768011-----32088999999
Q ss_pred ----H-HCCHHHH-H------HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHCC
Q ss_conf ----2-1002789-9------9999999999999489899983339999999------9963899999999999975288
Q 001585 266 ----K-SWGWWKV-K------KWTVHILNRLYTRFGDLKLQNPENRAFAQMF------QKNYAGKILECHLNLLNRIRVG 327 (1049)
Q Consensus 266 ----~-~~~~~k~-k------k~~~~~l~~l~~~~~~~~~~~~~~~~f~~~f------~~~~~~~~~~~~~~~l~~~~~~ 327 (1049)
. ...+++. . ++....+++++.+|++.. ...+...+ ....+..+++.++.... ..+
T Consensus 289 ~~~~~~~~~~~~~~~~~d~~~~~~~~~l~~l~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~l~~ll~~~~--~~~ 361 (971)
T 2x1g_F 289 KMFLDSLSEITKTEWKRENDNEDIIVHIYMLFVSSVERH-----STLLLSGITSADPELSILVHRIVQEILHCTD--KPG 361 (971)
T ss_dssp HHHHHHHHHHHHHHSSSSCSCSHHHHHHHHHHHHHHHHT-----HHHHHHHHHTCCHHHHHHHHHHHHHHHHHHH--CSS
T ss_pred HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH-----HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHC--CCC
T ss_conf 999986899999985656540689999999999999999-----9999987315765354999999999999975--888
Q ss_pred CC-CCHHHHHHHHHHHHHHCC----------CCHHHHHCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHCCCC
Q ss_conf 63-598999999999995227----------8024554043399999997641365693248644109789996706753
Q 001585 328 GY-LPDRVTNLILQYLSNSIS----------KNSMYNLLQPRLDVLLFEIVFPLMCFNDNDQKLWDEDPHEYVRKGYDII 396 (1049)
Q Consensus 328 ~~-~~~~~~~~~l~fl~~~~~----------~~~~~~~~~~~l~~li~~ii~p~l~l~~~d~e~we~Dp~efi~~~~d~~ 396 (1049)
.+ ..+.+...+++||..+++ .+..+..++|++..++..++.+....++++.+.| |++| +
T Consensus 362 ~~~~~~~v~~~~l~fw~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~p~~~~~~~~--d~~e--~------ 431 (971)
T 2x1g_F 362 IYPVEESCSTMALAFWYMLQDEVFAMSNDEQKHKCWEYIKPLYAHLTRILVRKSEQPDEKSLAKW--SSDD--L------ 431 (971)
T ss_dssp CTTTTCTTHHHHHHHHHHHHHHHHC-------CHHHHHHHHHHHHHHHHHHHHTSCCCTTTTSCS--CHHH--H------
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC--CHHH--H------
T ss_conf 88863124587899999999999741331000899999999999999999998619996243356--7757--9------
Q ss_pred CCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
Q ss_conf 44478888999999999974060209999999999741267997677773236499999999988612179733569999
Q 001585 397 EDLYSPRTASMDFVSELVRKRGKENLQKFIQFIVGIFKRYDETPVEYKPYRQKDGALLAIGALCDKLKQTEPYKSELERM 476 (1049)
Q Consensus 397 ~d~~s~R~aa~~ll~~L~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~~~keaal~~lg~la~~l~~~~~~~~~~e~~ 476 (1049)
+++.+.|.++.+++..++..+++.+++.+++++.+.++++..++ .+|+.+||+++++|++++++.+.. ...++.+
T Consensus 432 ~~f~~~R~~~~~~l~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~---~~w~~~eaal~~l~~iae~~~~~~--~~~l~~l 506 (971)
T 2x1g_F 432 ECFRCYRQDISDTFMYCYDVLNDYILEILAAMLDEAIADLQRHP---THWTKLEACIYSFQSVAEHFGGEE--KRQIPRL 506 (971)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHHHHCT---TCCHHHHHHHHHHHHTTTC--------CHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC---CCHHHHHHHHHHHHHHHHHCCHHH--HHHHHHH
T ss_conf 99999999999999999999709999999999999997346898---738999999999999983548033--4779999
Q ss_pred HHHHHCCCCC--CCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 9983220367--98741059999999970105668933799999999841899997358979999999997134442100
Q 001585 477 LVQHVFPEFS--SPVGHLRAKAAWVAGQYAHINFSDQNNFRKALHSVVSGLRDPELPVRVDSVFALRSFVEACRDLNEIR 554 (1049)
Q Consensus 477 l~~~v~p~l~--~~~~~lr~ra~~~l~~~~~~~f~~~~~~~~~~~~l~~~l~d~~~~V~~~Aa~aL~~~~~~~~~~~~l~ 554 (1049)
+. ++|.+. +++|.+|.++||++|+|+++...+++++..+++.++..| + ++|+.+||.|+.+|++.+ ...+.
T Consensus 507 ~~--~l~~l~~~d~~~~vr~~a~~~l~~~~~~l~~~~~~l~~vl~~l~~~l-~--~~v~~~A~~al~~l~~~~--~~~l~ 579 (971)
T 2x1g_F 507 MR--VLAEIPYEKLNVKLLGTALETMGSYCNWLMENPAYIPPAINLLVRGL-N--SSMSAQATLGLKELCRDC--QLQLK 579 (971)
T ss_dssp HH--HHHHSCTTTSCHHHHHHHHHHHHHTHHHHC----CHHHHHHHHHHHH-H--SSCHHHHHHHHHHHHHHC--HHHHH
T ss_pred HH--HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH-C--HHHHHHHHHHHHHHHHHH--HHHCC
T ss_conf 99--99856765367899999999999878888608898999999999874-8--588999999999999998--88623
Q ss_pred CCHHHHHHHHHHHHHH--HCHHHHHHHHHHH---HHHCC-CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
Q ss_conf 2229999999998511--1112599999999---99706-7644428989999999999998302489999984588999
Q 001585 555 PILPQLLDEFFKLMNE--VENEDLVFTLETI---VDKFG-EEMAPYALGLCQNLAAAFWRCMNTAEADEDADDPGALAAV 628 (1049)
Q Consensus 555 p~l~~il~~Ll~ll~~--~~~e~l~~~l~~i---v~~~~-~~i~p~~~~l~~~L~~~~~~~~~~~~~d~~~~~~~~~~~~ 628 (1049)
||++++++.|+.+++. .+.+....+++++ +...+ ++..||...+++.+.+.+.+..++...+ ++......
T Consensus 580 p~~~~ll~~l~~~l~~~~~~~~~~~~~~~ai~~i~~~~~~~~~~~~~~~ll~~l~~~l~~~~~~~~~~----~~~~~~~~ 655 (971)
T 2x1g_F 580 PYADPLLNACHASLNTGRMKNSDSVRLMFSIGKLMSLLRPEEIPKYLDIIVSPCFEELQAICQADSKT----PAARIRTI 655 (971)
T ss_dssp HHHHHHHHHHHHHHHSTTSCHHHHHHHHHHHHHHHHTSCTTHHHHHHHHHHHHHHHHHHHHHTC---C----HHHHHHHH
T ss_pred CCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC----HHHHHHHH
T ss_conf 00799999999997278999289999999999999729999999999999989999999998568998----22599999
Q ss_pred HHHHHHHHHHHHHCCC----------HHHHHHHHHHHHHHHHHHCCCC--HHHHHHHHHHHHHHHHHC-CCCCCHHHHHH
Q ss_conf 9999999999840488----------3779978764899999980136--224899999999997602-99899878898
Q 001585 629 GCLRAISTILESVSRL----------PHLFVQIEPTLLPIMRRMLTTD--GQEVFEEVLEIVSYMTFF-SPTISLEMWSL 695 (1049)
Q Consensus 629 ~~l~~i~~ii~~~~~~----------~~~~~~l~~~~~p~i~~il~~~--~~~~~e~~l~ll~~l~~~-~~~isp~l~~l 695 (1049)
.++++++.++++++.. ++.+..+.+.++|++..+++.. ..++.+.++.++..++.. ...+.|.++.+
T Consensus 656 ~~l~~L~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~l~~~~~~~~v~e~~~~~~~~~~~~~~~~~~p~l~~~ 735 (971)
T 2x1g_F 656 FRLNMISTLFSSLNTDVDEQATDQPIVQPVLLVMQRTMPIFKRIAEMWVEEIDVLEAACSAMKHAITNLRSSFQPMLQDL 735 (971)
T ss_dssp HHHHHHHHHHHHHTC-------------CCHHHHHTTHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHC--CTHHHHH
T ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
T ss_conf 99999999984167776853334567883699999999999999986436378999999999999986144042527899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCC-CCCCCCCCCHHHHHHHHHHHHHCCC---CC-CCCC-CCCHHHHHHH
Q ss_conf 99999997555862485358865567614-733-3336688605999999999986189---99-9863-4724459999
Q 001585 696 WPLMMEALADWAIDFFPNILVPLDNYISR-GTA-HFLTCKEPDYQQSLWSMVSSIMADK---NL-EDGD-IEPAPKLIEV 768 (1049)
Q Consensus 696 ~~~l~~~~~~~~~~~l~~~~~~L~~~i~~-~~~-~~l~~~~~~~~~~i~~~~~~~l~~~---~~-~~~~-~~~a~~ll~~ 768 (1049)
++.+...+.+... ...+.++...+.. |.+ .... .-.+.+..++..+-.++... .. +..| ....+.++..
T Consensus 736 ~~~l~~~~~~~~~---~~~l~l~~~~i~~~~~~~~~~~-~l~~~~~~~~~~~~~~l~~~~~~~~~~~pd~~~~~f~ll~~ 811 (971)
T 2x1g_F 736 CLFIVASFQTRCC---APTLEISKTAIVMFFKDEGCKP-LMQQLLREFIQHSFKLFESTPEQNFSNISDTMETFFGCLTQ 811 (971)
T ss_dssp HHHHHHHCC--CC---HHHHHHHHHHHTTCCC-----H-HHHHHHHHHHHHHHHHHTSCTTTHHHHTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCC---HHHHHHHHHHHHHHCCCCCHHH-HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 9999999866883---4999999999999588900589-99999999999999998606546776484489999999999
Q ss_pred HHHHCCCCCH--HC-HHHHHHHHHHHHHH
Q ss_conf 9985456730--20-28899999999972
Q 001585 769 VFQNCKGQVD--HW-VEPYLRITVERLRR 794 (1049)
Q Consensus 769 li~~~~~~~~--~~-l~~il~~~l~~L~~ 794 (1049)
++.+++..+- +. ++.++..++..+..
T Consensus 812 ~l~~~p~~~~~s~~~l~~i~~~~~~~l~~ 840 (971)
T 2x1g_F 812 IIKKIPQVLEDKTLAYDRLVFYAQRGMTL 840 (971)
T ss_dssp HHHSSGGGGGCTTSCHHHHHHHHHHHHTS
T ss_pred HHHHCCHHHCCCCCCHHHHHHHHHHHCCC
T ss_conf 99868599818821289999999998287
No 5
>2x19_B Importin-13; nuclear transport, protein transport; HET: GTP; 2.80A {Homo sapiens} PDB: 2xwu_B
Probab=1.00 E-value=1 Score=407.28 Aligned_cols=738 Identities=13% Similarity=0.178 Sum_probs=483.3
Q ss_pred CCHHHHHHHHHH-HCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 995899999997-1499988899999999971069871999999997148683467999999977563037888888689
Q 001585 1 MDLPSLALILQG-ALSPNPEERKAAEHSLNQFQYTPQHLVRLLQIIVDNNCDLSVRQVASIHFKNFIAKNWAPHEPNEQQ 79 (1049)
Q Consensus 1 md~~~l~~~L~~-tls~d~~~r~~AE~~L~~~~~~p~f~~~Ll~i~~~~~~~~~iR~~Aai~lKn~I~~~W~~~~~~~~~ 79 (1049)
||+++|.+++.+ +.++|++.|++||++|++++++|+++..+..++.+ +.+..+|++|++.|||.|+++|.
T Consensus 21 ~~~~~l~~~l~~l~~~~~~~~r~~A~~~L~~~~~~p~~~~~~~~lL~~-~~~~~vr~~aa~~L~~~i~~~w~-------- 91 (963)
T 2x19_B 21 FTVENVEKALHQLYYDPNIENKNLAQKWLMQAQVSPQAWHFSWQLLQP-DKVPEIQYFGASALHIKISRYWS-------- 91 (963)
T ss_dssp CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHSTTHHHHHHHHTST-TSCHHHHHHHHHHHHHHHHHCGG--------
T ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCC-CCCHHHHHHHHHHHHHHHHHCHH--------
T ss_conf 559999999999835979899999999999984699999999998657-97258899999999999973887--------
Q ss_pred CCCHHHHHHHHHHHHHHHHC---CCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH------H--HHHHHHHHHH
Q ss_conf 99967899999999989611---99588999999999999730899824579999997103------3--3988999999
Q 001585 80 KISQVDKDMVRDHILVFVAQ---VPPLLRVQLGECLKTIIHADYPEQWPHLLDWVKHNLQD------Q--QVYGALFVLR 148 (1049)
Q Consensus 80 ~i~~~~k~~Ir~~Ll~~l~~---~~~~ir~ql~~~i~~Ia~~d~P~~Wp~Ll~~l~~~l~s------~--~~~~~L~~L~ 148 (1049)
.+++++|..||+.+++.+.+ .++.||++++.+++.|+++|||++||++++.+++.+++ + ...+++.+|.
T Consensus 92 ~l~~~~~~~ir~~ll~~l~~~~~~~~~ir~kl~~~la~i~~~~~p~~Wp~~l~~l~~~~~~~~~~~~~~~~~~~~l~iL~ 171 (963)
T 2x19_B 92 DIPTDQYESLKAQLFTQITRFASGSKIVLTRLCVALASLALSMMPDAWPCAVADMVRLFQAEDSPVDGQGRCLALLELLT 171 (963)
T ss_dssp GSCGGGHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHHTTTTSTTHHHHHHHHHCC------CHHHHHHHHHHHH
T ss_pred HCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
T ss_conf 49999999999999999998748988999999999999998748311555999999998643357874788999999998
Q ss_pred HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 99995016888765444322101356445405999999997999999999751029964699999999999898654068
Q 001585 149 ILSRKYEYQPTDSTSMKGYRIYEFKSDEERTPVYRIVEETFHHLLNIFNRLVQIVNPSLEVADLIKLICKIFWSSIYLEI 228 (1049)
Q Consensus 149 ~i~k~~~~~~~~~~~~~~~r~~~~~~~~~~~~l~~i~~~~~p~L~~~~~~~~~~~~~~~~~~~~~~~~lki~~~~~~~~l 228 (1049)
.++++... .++ ..+.|..+...+...+|.+++++.+.+.....+ ..+...+++|+.+++....
T Consensus 172 ~l~ee~~~-------------~~~-~~~~r~~~~~~l~~~~~~i~~ll~~~l~~~~~~---~~~~~~~l~~l~~wi~~~~ 234 (963)
T 2x19_B 172 VLPEEFQT-------------SRL-PQYRKGLVRTSLAVECGAVFPLLEQLLQQPSSP---SCVRQKVLKCFSSWVQLEV 234 (963)
T ss_dssp HHHHHHTT-------------CCC----------CCSGGGHHHHHHHHHHHHSCTTCC---HHHHHHHHHHHHHHHTSSC
T ss_pred HCHHHHHC-------------CCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC---HHHHHHHHHHHHHHHCCCC
T ss_conf 68998850-------------658-699999999999987889999999998277880---5799999999999982899
Q ss_pred CC------------CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCHHH-----------H----HHHHHHHH
Q ss_conf 71------------127923488999999997068999999999946652100278-----------9----99999999
Q 001585 229 PK------------QLLDPNVFNAWMILFLNVLERPVPSEGEPADPEQRKSWGWWK-----------V----KKWTVHIL 281 (1049)
Q Consensus 229 p~------------~~~~~~~l~~w~~~~~~~l~~~~p~~~~~~d~~~~~~~~~~k-----------~----kk~~~~~l 281 (1049)
+. .+.+++....|+..+..++....++. -.. ....++. . ..|.++.+
T Consensus 235 ~~~~~~~ll~~l~~~l~~~~~~~~a~~~l~~i~~~~~~~~----~~~--~~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~ 308 (963)
T 2x19_B 235 PLQDCEALIQAAFAALQDSELFDSSVEAIVNAISQPDAQR----YVN--TLLKLIPLVLGLQEQLRQAVQNGDMETSHGI 308 (963)
T ss_dssp CGGGTHHHHHHHHHHTTSTTTHHHHHHHHHHHHTCTTGGG----CHH--HHHHHHHHHHTTHHHHHHHHHTTCHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCC----CHH--HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
T ss_conf 8534168999999986796479999999999975311245----779--9999999997407999999987798999999
Q ss_pred HHHHHHHCCCCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH--CCCC-CCHHHHHHHHHHHHHHCCC---------
Q ss_conf 9999994898999833399999999963-8999999999999752--8863-5989999999999952278---------
Q 001585 282 NRLYTRFGDLKLQNPENRAFAQMFQKNY-AGKILECHLNLLNRIR--VGGY-LPDRVTNLILQYLSNSISK--------- 348 (1049)
Q Consensus 282 ~~l~~~~~~~~~~~~~~~~f~~~f~~~~-~~~~~~~~~~~l~~~~--~~~~-~~~~~~~~~l~fl~~~~~~--------- 348 (1049)
++++.+|++. + ...+.... .+..+..+++.+-... .+.| ..+.+...+++||..+++.
T Consensus 309 ~~l~~~~~~~------~---~~~l~~~~~~~~~~~~~l~~ll~~~~~~~~~~~~~~v~~~~l~fw~~l~~~~~~~~~~~~ 379 (963)
T 2x19_B 309 CRIAVALGEN------H---SRALLDQVEHWQSFLALVNMIMFCTGIPGHYPVNETTSSLTLTFWYTLQDDILSFEAEKQ 379 (963)
T ss_dssp HHHHHHHHHH------H---HHHHHHCGGGHHHHHHHHHHHHHHHTCSSCTTTTCGGGGGGHHHHHHHHHHHTTSCHHHH
T ss_pred HHHHHHHHHH------H---HHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999998------6---999973755658999999999999758888872034544129999999999986234445
Q ss_pred CHHHHHCHHHHHHHHHHHHHHCCCCCHHH-HHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHH
Q ss_conf 02455404339999999764136569324-86441097899967067534447888899999999997406020999999
Q 001585 349 NSMYNLLQPRLDVLLFEIVFPLMCFNDND-QKLWDEDPHEYVRKGYDIIEDLYSPRTASMDFVSELVRKRGKENLQKFIQ 427 (1049)
Q Consensus 349 ~~~~~~~~~~l~~li~~ii~p~l~l~~~d-~e~we~Dp~efi~~~~d~~~d~~s~R~aa~~ll~~L~~~~~~~~~~~l~~ 427 (1049)
+..+..++|++..++..++ +.+...+++ .+.|++|+. +++.+.|.++.+++..++...++.+++.+++
T Consensus 380 ~~~~~~~~~~l~~l~~~ll-~~~~~p~~~~~~~~~~de~----------~~~~~~r~~~~~~L~~~~~~~~~~~l~~~~~ 448 (963)
T 2x19_B 380 AVYQQVYRPVYFQLVDVLL-HKAQFPSDEEYGFWSSDEK----------EQFRIYRVDISDTLMYVYEMLGAELLSNLYD 448 (963)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHSCCCHHHHHTSCHHHH----------HHHHHHHHHHHHHHHHHHHHHTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHCCCCCCCCCCCCHHHH----------HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_conf 7889999999999999999-9980998302267776389----------9999999999999999999706899999999
Q ss_pred HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCC
Q ss_conf 99997412679976777732364999999999886121797335699999983220367987410599999999701056
Q 001585 428 FIVGIFKRYDETPVEYKPYRQKDGALLAIGALCDKLKQTEPYKSELERMLVQHVFPEFSSPVGHLRAKAAWVAGQYAHIN 507 (1049)
Q Consensus 428 ~i~~~l~~~~~~~~~~~~~~~keaal~~lg~la~~l~~~~~~~~~~e~~l~~~v~p~l~~~~~~lr~ra~~~l~~~~~~~ 507 (1049)
++.+.++++.. ..+|+.+||+++++|++++++.+.. ...++.++. +++.+.+++|.+|.++||++|+|+++.
T Consensus 449 ~l~~~l~~~~~----~~~w~~~eaal~al~~i~~~~~~~~--~~~l~~l~~--~l~~l~~~~~~vr~~~~~~l~~~~~~l 520 (963)
T 2x19_B 449 KLGRLLTSSEE----PYSWQHTEALLYGFQSIAETIDVNY--SDVVPGLIG--LIPRISISNVQLADTVMFTIGALSEWL 520 (963)
T ss_dssp HHHHHHHTCCC----SCCHHHHHHHHHHHHHHTTSCCSSC--CSHHHHHHH--HGGGSCCCSHHHHHHHHHHHHHTHHHH
T ss_pred HHHHHHHHCCC----CCCHHHHHHHHHHHHHHHHHCCCHH--HHHHHHHHH--HHHHCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 99999972579----9866799899999999970438224--678999999--998579985899999999999888888
Q ss_pred CCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH--HCHHH---HHHHHHH
Q ss_conf 689337999999998418999973589799999999971344421002229999999998511--11125---9999999
Q 001585 508 FSDQNNFRKALHSVVSGLRDPELPVRVDSVFALRSFVEACRDLNEIRPILPQLLDEFFKLMNE--VENED---LVFTLET 582 (1049)
Q Consensus 508 f~~~~~~~~~~~~l~~~l~d~~~~V~~~Aa~aL~~~~~~~~~~~~l~p~l~~il~~Ll~ll~~--~~~e~---l~~~l~~ 582 (1049)
..+++.+..+++.++.+|++ .+|+..||.|+.++++.+ +..+.||++++++.|..+++. .+.+. +..++..
T Consensus 521 ~~~~~~l~~vl~~l~~~l~~--~~V~~~A~~al~~l~~~~--~~~l~p~~~~il~~l~~~l~~~~~~~~~~~~~~eai~~ 596 (963)
T 2x19_B 521 ADHPVMINSVLPLVLHALGN--PELSVSSVSTLKKICREC--KYDLPPYAANIVAVSQDVLMKQIHKTSQCMWLMQALGF 596 (963)
T ss_dssp HHCHHHHTTTHHHHHHHTTC--GGGHHHHHHHHHHHHHHT--GGGCTTTHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHH
T ss_pred HHCHHHHHHHHHHHHHHHCC--CHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
T ss_conf 75889899999999987178--468999999999999998--99877669999999999863578984889999999999
Q ss_pred HHHHCC-CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC------------------
Q ss_conf 999706-7644428989999999999998302489999984588999999999999984048------------------
Q 001585 583 IVDKFG-EEMAPYALGLCQNLAAAFWRCMNTAEADEDADDPGALAAVGCLRAISTILESVSR------------------ 643 (1049)
Q Consensus 583 iv~~~~-~~i~p~~~~l~~~L~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~i~~ii~~~~~------------------ 643 (1049)
++...+ ++..||...+++.+.+.+.++.++.. + .+.......++++++.++++++.
T Consensus 597 i~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~-~----~~~~~~~~~~l~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~ 671 (963)
T 2x19_B 597 LLSALQVEEILKNLHSLISPYIQQLEKLAEEIP-N----PSNKLAIVHILGLLSNLFTTLDISHHEDDHEGPELRKLPVP 671 (963)
T ss_dssp HHTTSCHHHHHHHHHHHHHHHHHHHHHHHSSCS-C----HHHHHHHHHHHHHHHHHHHHCCSSCCC--------------
T ss_pred HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC-C----HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
T ss_conf 996299999999999999899999999982789-8----77899999999999999977489864332223221247777
Q ss_pred -CHHHHHHHHHHHHHHHHHHCCCC--HHHHHHHHHHHHHHHHHCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf -83779978764899999980136--2248999999999976029-9899878898999999975558624853588655
Q 001585 644 -LPHLFVQIEPTLLPIMRRMLTTD--GQEVFEEVLEIVSYMTFFS-PTISLEMWSLWPLMMEALADWAIDFFPNILVPLD 719 (1049)
Q Consensus 644 -~~~~~~~l~~~~~p~i~~il~~~--~~~~~e~~l~ll~~l~~~~-~~isp~l~~l~~~l~~~~~~~~~~~l~~~~~~L~ 719 (1049)
.+..+..+.+.++|++..+++.. ..+..+.++.++..++... ..+.|.+..+++.+...+... ..+..+.++.
T Consensus 672 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~e~~~~~l~~~~~~~~~~~~~~l~~~~~~l~~~~~~~---~~~~~l~l~~ 748 (963)
T 2x19_B 672 QGPNPVVVVLQQVFQLIQKVLSKWLNDAQVVEAVCAIFEKSVKTLLDDFAPMVPQLCEMLGRMYSTI---PQASALDLTR 748 (963)
T ss_dssp -CCCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSSTTGGGHHHHHHHHHHHHHHS---CCHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCC---CCCHHHHHHH
T ss_conf 8899469999999999999998566746899999999999997501034240799999999998757---8508999999
Q ss_pred HHHH--CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCC-CCCHHHHHHHHHHHCCCCC--HHC-HHHHHHHHHHHHH
Q ss_conf 6761--47333336688605999999999986189999863-4724459999998545673--020-2889999999997
Q 001585 720 NYIS--RGTAHFLTCKEPDYQQSLWSMVSSIMADKNLEDGD-IEPAPKLIEVVFQNCKGQV--DHW-VEPYLRITVERLR 793 (1049)
Q Consensus 720 ~~i~--~~~~~~l~~~~~~~~~~i~~~~~~~l~~~~~~~~~-~~~a~~ll~~li~~~~~~~--~~~-l~~il~~~l~~L~ 793 (1049)
.++. +..+.+.. .-++.++.++...-.++...-.+..+ ....+.++..++.+++..+ .+. ++.++..++..+.
T Consensus 749 ~li~~f~~~~~~~~-~~~~~l~~~~~~~l~~~~~~~~~~pd~~~~~f~ll~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~ 827 (963)
T 2x19_B 749 QLVHIFAHEPAHFP-PIEALFLLVTSVTLTLFQQGPRDHPDIVDSFMQLLAQALKRKPDLFLCERLDVKAVFQCAVLALK 827 (963)
T ss_dssp HHHHHHTTCTTTCH-HHHHHHHHHHHHHHHHHHHCTTTCHHHHHHHHHHHHHHHHHCGGGGGCTTSCHHHHHHHHHHHTT
T ss_pred HHHHHHCCCCCHHH-HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHCC
T ss_conf 99998577801378-99999999999999998627655863899999999999975839872985147999999999757
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q ss_conf 2124489999999999987
Q 001585 794 RAEKSYLKCLLVQVIADAL 812 (1049)
Q Consensus 794 ~~~~~~~~~~~l~v~~~~~ 812 (1049)
. ..+......+.++..++
T Consensus 828 ~-~~~~~~~~~l~~l~~l~ 845 (963)
T 2x19_B 828 F-PEAPTVKASCGFFTELL 845 (963)
T ss_dssp C-SCHHHHHHHHHHHHHHG
T ss_pred C-CCHHHHHHHHHHHHHHH
T ss_conf 8-97799999999999998
No 6
>2bpt_A Importin beta-1 subunit; nuclear transport, nucleocytoplasmic transport, nuclear trafficking, importin- beta, complex; 1.99A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 2bku_B 3ea5_B* 3nd2_A
Probab=1.00 E-value=1 Score=399.10 Aligned_cols=691 Identities=13% Similarity=0.207 Sum_probs=482.5
Q ss_pred CCHHHHHHHHHHH-CCCCHHHHHHHHHHHHHHCCC--CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCC--
Q ss_conf 9958999999971-499988899999999971069--87199999999714868346799999997756303788888--
Q 001585 1 MDLPSLALILQGA-LSPNPEERKAAEHSLNQFQYT--PQHLVRLLQIIVDNNCDLSVRQVASIHFKNFIAKNWAPHEP-- 75 (1049)
Q Consensus 1 md~~~l~~~L~~t-ls~d~~~r~~AE~~L~~~~~~--p~f~~~Ll~i~~~~~~~~~iR~~Aai~lKn~I~~~W~~~~~-- 75 (1049)
||++++.++|.++ +|||+++|++||++|++++++ |+|+..|++++.+.+.+..+|++|+++|||.|+++|....+
T Consensus 1 Md~~~l~~~L~~~~~s~d~~~r~~Ae~~L~~~~~~~~~~~~~~l~~il~~~~~~~~vR~~A~~~lk~~i~~~w~~~~~~~ 80 (861)
T 2bpt_A 1 MSTAEFAQLLENSILSPDQNIRLTSETQLKKLSNDNFLQFAGLSSQVLIDENTKLEGRILAALTLKNELVSKDSVKTQQF 80 (861)
T ss_dssp CCHHHHHHHHHHHHHCSSHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHTTTCCSSHHHHHHH
T ss_pred CCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHH
T ss_conf 98779999999742693979999999999999851999999999999837899867999999998702257574878999
Q ss_pred -CCCCC-CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC-CCCHHHHHHHHHHHHHH----HHHHHHHHHH
Q ss_conf -86899-99678999999999896119958899999999999973089-98245799999971033----3988999999
Q 001585 76 -NEQQK-ISQVDKDMVRDHILVFVAQVPPLLRVQLGECLKTIIHADYP-EQWPHLLDWVKHNLQDQ----QVYGALFVLR 148 (1049)
Q Consensus 76 -~~~~~-i~~~~k~~Ir~~Ll~~l~~~~~~ir~ql~~~i~~Ia~~d~P-~~Wp~Ll~~l~~~l~s~----~~~~~L~~L~ 148 (1049)
..|.. +++++|..||+.+++.+.++++.+|++++.+++.|++.+|| +.||++++.+.+.++++ ..++++.++.
T Consensus 81 ~~~~~~~l~~~~~~~ik~~ll~~l~~~~~~vr~~~~~~l~~i~~~~~p~~~w~~ll~~L~~~l~~~~~~~~r~~al~~l~ 160 (861)
T 2bpt_A 81 AQRWITQVSPEAKNQIKTNALTALVSIEPRIANAAAQLIAAIADIELPHGAWPELMKIMVDNTGAEQPENVKRASLLALG 160 (861)
T ss_dssp HHHHHHHSCHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHGGGTCCHHHHHHHHHHTSTTSCHHHHHHHHHHHH
T ss_pred HHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHH
T ss_conf 97676629999999999999998779963799999999999998467645549999999998726897899999999999
Q ss_pred HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 99995016888765444322101356445405999999997999999999751029964699999999999898654068
Q 001585 149 ILSRKYEYQPTDSTSMKGYRIYEFKSDEERTPVYRIVEETFHHLLNIFNRLVQIVNPSLEVADLIKLICKIFWSSIYLEI 228 (1049)
Q Consensus 149 ~i~k~~~~~~~~~~~~~~~r~~~~~~~~~~~~l~~i~~~~~p~L~~~~~~~~~~~~~~~~~~~~~~~~lki~~~~~~~~l 228 (1049)
.+++.+.. +.+ .+......+++.+. ..+.+..+ ...++..+++++..++.. .
T Consensus 161 ~l~~~~~~--------------~~~------~~~~~~~~ll~~l~----~~l~~~~~---~~~vr~~al~~l~~~~~~-~ 212 (861)
T 2bpt_A 161 YMCESADP--------------QSQ------ALVSSSNNILIAIV----QGAQSTET---SKAVRLAALNALADSLIF-I 212 (861)
T ss_dssp HHHHTSST--------------TSS------TTGGGHHHHHHHHH----HHHSTTCC---CHHHHHHHHHHHHHHGGG-C
T ss_pred HHHHCCCH--------------HHH------HHHHHHHHHHHHHH----HHHCCCCC---CHHHHHHHHHHHHHHHHH-H
T ss_conf 99972784--------------356------78988999999999----84157999---878999999999999999-9
Q ss_pred CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
Q ss_conf 71127923488999999997068999999999946652100278999999999999999489899983339999999996
Q 001585 229 PKQLLDPNVFNAWMILFLNVLERPVPSEGEPADPEQRKSWGWWKVKKWTVHILNRLYTRFGDLKLQNPENRAFAQMFQKN 308 (1049)
Q Consensus 229 p~~~~~~~~l~~w~~~~~~~l~~~~p~~~~~~d~~~~~~~~~~k~kk~~~~~l~~l~~~~~~~~~~~~~~~~f~~~f~~~ 308 (1049)
...+.........++.+...+.. +.|++++++++++..+...++.. + .+
T Consensus 213 ~~~~~~~~~~~~ll~~l~~~~~~-----------------~~~~~r~~a~~~l~~l~~~~~~~------~--------~~ 261 (861)
T 2bpt_A 213 KNNMEREGERNYLMQVVCEATQA-----------------EDIEVQAAAFGCLCKIMSKYYTF------M--------KP 261 (861)
T ss_dssp HHHHTSHHHHHHHHHHHHHHHTC-----------------SCHHHHHHHHHHHHHHHHHHGGG------C--------HH
T ss_pred HHHCCCHHHHHHHHHHHHHHHCC-----------------CCHHHHHHHHHHHHHHHHHHHHH------H--------HH
T ss_conf 98706766899999999998659-----------------98899999999999999998899------9--------99
Q ss_pred HHH-HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHH---------------HHCHHHHHHHHHHHHHHCCC
Q ss_conf 389-99999999999752886359899999999999522780245---------------54043399999997641365
Q 001585 309 YAG-KILECHLNLLNRIRVGGYLPDRVTNLILQYLSNSISKNSMY---------------NLLQPRLDVLLFEIVFPLMC 372 (1049)
Q Consensus 309 ~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~l~fl~~~~~~~~~~---------------~~~~~~l~~li~~ii~p~l~ 372 (1049)
+++ .+++.++..+. ...+.++..+++||..+++..... +.+++.+..++..++ ..+
T Consensus 262 ~l~~~l~~~~~~~~~------~~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~ll-~~l- 333 (861)
T 2bpt_A 262 YMEQALYALTIATMK------SPNDKVASMTVEFWSTICEEEIDIAYELAQFPQSPLQSYNFALSSIKDVVPNLL-NLL- 333 (861)
T ss_dssp HHHHTHHHHHHHHTT------CSSHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCSCCCCCHHHHHHHHHHHHHH-HHT-
T ss_pred HHHHHHHHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH-HHH-
T ss_conf 889999999999873------772789999999999999878864333210357732569999999988999999-998-
Q ss_pred CCHHHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH
Q ss_conf 69324864410978999670675344478888999999999974060209999999999741267997677773236499
Q 001585 373 FNDNDQKLWDEDPHEYVRKGYDIIEDLYSPRTASMDFVSELVRKRGKENLQKFIQFIVGIFKRYDETPVEYKPYRQKDGA 452 (1049)
Q Consensus 373 l~~~d~e~we~Dp~efi~~~~d~~~d~~s~R~aa~~ll~~L~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~~~keaa 452 (1049)
++.+. | ..++.+++|.+|..++..++..+++.+++.+++++.+.+++ .+|+.|+++
T Consensus 334 -~~~~~-----d----------~~d~~~~~r~~a~~~L~~l~~~~~~~~~~~l~~~l~~~l~~--------~~~~~r~~a 389 (861)
T 2bpt_A 334 -TRQNE-----D----------PEDDDWNVSMSAGACLQLFAQNCGNHILEPVLEFVEQNITA--------DNWRNREAA 389 (861)
T ss_dssp -TCCCC-----C-----------CCCCCHHHHHHHHHHHHHHHHHGGGGHHHHHHHHHHHTTC--------SSHHHHHHH
T ss_pred -HHCCC-----C----------CCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC--------CCHHHHHHH
T ss_conf -70665-----3----------01246868999999999999874086899999999987579--------972699999
Q ss_pred HHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCC---CCCHHHHHHHHHHHHHCCCCCC
Q ss_conf 9999999886121797335699999983220367987410599999999701056---6893379999999984189999
Q 001585 453 LLAIGALCDKLKQTEPYKSELERMLVQHVFPEFSSPVGHLRAKAAWVAGQYAHIN---FSDQNNFRKALHSVVSGLRDPE 529 (1049)
Q Consensus 453 l~~lg~la~~l~~~~~~~~~~e~~l~~~v~p~l~~~~~~lr~ra~~~l~~~~~~~---f~~~~~~~~~~~~l~~~l~d~~ 529 (1049)
+.++|.+++.+... .+...++.+ ...+++.+.++++.+|.+++|++|+++... +.+...+..+++.++..+.++
T Consensus 390 ~~~l~~i~~~~~~~-~~~~~l~~i-l~~l~~~l~d~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~~~~l~~l~~~l~~~- 466 (861)
T 2bpt_A 390 VMAFGSIMDGPDKV-QRTYYVHQA-LPSILNLMNDQSLQVKETTAWCIGRIADSVAESIDPQQHLPGVVQACLIGLQDH- 466 (861)
T ss_dssp HHHHHHTSSSSCHH-HHHHHHHHH-HHHHHHGGGCSCHHHHHHHHHHHHHHHHHHGGGSCTTTTHHHHHHHHHHHHTSC-
T ss_pred HHHHHHHHCCCCHH-HHHHHHHHH-HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC-
T ss_conf 99999998599878-889989999-999998828995999999999999999873540487888999999999976447-
Q ss_pred CCHHHHHHHHHHHHHHHCC--CCCCCCCCHHHHHHHHHHHHHHHCHH-----HHHHHHHHHHHHCCCCCCCCHHHHHHHH
Q ss_conf 7358979999999997134--44210022299999999985111112-----5999999999970676444289899999
Q 001585 530 LPVRVDSVFALRSFVEACR--DLNEIRPILPQLLDEFFKLMNEVENE-----DLVFTLETIVDKFGEEMAPYALGLCQNL 602 (1049)
Q Consensus 530 ~~V~~~Aa~aL~~~~~~~~--~~~~l~p~l~~il~~Ll~ll~~~~~e-----~l~~~l~~iv~~~~~~i~p~~~~l~~~L 602 (1049)
..||..||.++..++.... ..+.+.||++.+++.|+.++...+.+ ....++..++...++++.||...+++.+
T Consensus 467 ~~v~~~a~~al~~l~~~~~~~~~~~l~~~~~~il~~L~~~l~~~d~~~~vr~~a~~al~~l~~~~~~~~~~~~~~l~~~l 546 (861)
T 2bpt_A 467 PKVATNCSWTIINLVEQLAEATPSPIYNFYPALVDGLIGAANRIDNEFNARASAFSALTTMVEYATDTVAETSASISTFV 546 (861)
T ss_dssp HHHHHHHHHHHHHHHHHHSSSSSCGGGGGHHHHHHHHHHHHTCSCCGGGHHHHHHHHHHHHHHHCCGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_conf 28999999999999986231354246899999999999998575861589999999999999976265699999999999
Q ss_pred HHHHHHHHHC--C-CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHH-HHHHHHHHHH
Q ss_conf 9999999830--2-4899999845889999999999999840488377997876489999998013622-4899999999
Q 001585 603 AAAFWRCMNT--A-EADEDADDPGALAAVGCLRAISTILESVSRLPHLFVQIEPTLLPIMRRMLTTDGQ-EVFEEVLEIV 678 (1049)
Q Consensus 603 ~~~~~~~~~~--~-~~d~~~~~~~~~~~~~~l~~i~~ii~~~~~~~~~~~~l~~~~~p~i~~il~~~~~-~~~e~~l~ll 678 (1049)
...+.+...- . ..++ +.+........+++++..++..++.. +..+.+.++|.+..+++.... ...+.++..+
T Consensus 547 ~~~l~~~~~~~~~i~~~~-~~~~~~~~~~~~~~~l~~l~~~~~~~---~~~~~~~l~~~l~~~l~~~~~~~v~~~~~~~l 622 (861)
T 2bpt_A 547 MDKLGQTMSVDENQLTLE-DAQSLQELQSNILTVLAAVIRKSPSS---VEPVADMLMGLFFRLLEKKDSAFIEDDVFYAI 622 (861)
T ss_dssp HHHHHHHTTSCGGGCCHH-HHHHHHHHHHHHHHHHHHHHHHCGGG---TGGGHHHHHHHHHHHHHSTTGGGTHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCHH-HHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
T ss_conf 999998875320138855-67779999999999999999985563---47899999999999974678875799999999
Q ss_pred HHHHHCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 9976029-989987889899999997555862485358865567614733333668860599999999998618999986
Q 001585 679 SYMTFFS-PTISLEMWSLWPLMMEALADWAIDFFPNILVPLDNYISRGTAHFLTCKEPDYQQSLWSMVSSIMADKNLEDG 757 (1049)
Q Consensus 679 ~~l~~~~-~~isp~l~~l~~~l~~~~~~~~~~~l~~~~~~L~~~i~~~~~~~l~~~~~~~~~~i~~~~~~~l~~~~~~~~ 757 (1049)
..++... ..+.|.+..++|.+.+.+.+.........+.++..+.....+.+. .+...++..+.+.+.+...+..
T Consensus 623 ~~l~~~~~~~~~~~l~~i~~~l~~~l~~~~~~vr~~a~~~l~~l~~~~~~~~~-----~~~~~l~~~l~~~l~~~~~~~~ 697 (861)
T 2bpt_A 623 SALAASLGKGFEKYLETFSPYLLKALNQVDSPVSITAVGFIADISNSLEEDFR-----RYSDAMMNVLAQMISNPNARRE 697 (861)
T ss_dssp HHHHHHHGGGGHHHHHHHHHHHHHHHHCTTSHHHHHHHHHHHHHHHHTGGGGH-----HHHHHHHHHHHHHHHCTTCCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCHHCC-----CHHHHHHHHHHHHHCCCCCCHH
T ss_conf 99999976609999999999999886556678999999999999987454031-----1199999999997278655676
Q ss_pred CCCCHHHHHHHHHHHCCCCCHHCHHHHHHHHHHHHHH
Q ss_conf 3472445999999854567302028899999999972
Q 001585 758 DIEPAPKLIEVVFQNCKGQVDHWVEPYLRITVERLRR 794 (1049)
Q Consensus 758 ~~~~a~~ll~~li~~~~~~~~~~l~~il~~~l~~L~~ 794 (1049)
.+..++..+..++..+++.+.+|++.++..++..+..
T Consensus 698 vr~~~~~~l~~l~~~~~~~~~~~l~~~l~~l~~~~~~ 734 (861)
T 2bpt_A 698 LKPAVLSVFGDIASNIGADFIPYLNDIMALCVAAQNT 734 (861)
T ss_dssp HHHHHHHHHHHHHHHHGGGGHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 6599999999999984050899999999999999736
No 7
>1qgr_A Protein (importin beta subunit); transport receptor, nuclear import, heat motif, NLS-binding; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qgk_A 2p8q_A 2q5d_A 3lww_A 1ukl_A 2qna_A
Probab=1.00 E-value=1 Score=352.86 Aligned_cols=685 Identities=14% Similarity=0.190 Sum_probs=468.2
Q ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHHCCC--CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCC---CCCC
Q ss_conf 999999971499988899999999971069--87199999999714868346799999997756303788888---8689
Q 001585 5 SLALILQGALSPNPEERKAAEHSLNQFQYT--PQHLVRLLQIIVDNNCDLSVRQVASIHFKNFIAKNWAPHEP---NEQQ 79 (1049)
Q Consensus 5 ~l~~~L~~tls~d~~~r~~AE~~L~~~~~~--p~f~~~Ll~i~~~~~~~~~iR~~Aai~lKn~I~~~W~~~~~---~~~~ 79 (1049)
+|.++|++++|||+++|++||++|+++..+ |+|...|++++.+.+.+..+|++|++.|||.+...|..... ..|.
T Consensus 2 ~l~~~L~~~~s~d~~~r~~A~~~L~~~~~~~~~~~~~~L~~~l~~~~~~~~vR~~a~~~Lk~~i~~~~~~~~~~~~~~w~ 81 (876)
T 1qgr_A 2 ELITILEKTVSPDRLELEAAQKFLERAAVENLPTFLVELSRVLANPGNSQVARVAAGLQIKNSLTSKDPDIKAQYQQRWL 81 (876)
T ss_dssp CHHHHHHGGGCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHCCSSHHHHHHHHHHHH
T ss_pred CHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHC
T ss_conf 68999997629898999999999999871680469999999985789987999999999987605543476789986440
Q ss_pred CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC-CCCHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHH
Q ss_conf 999678999999999896119958899999999999973089-98245799999971033-----398899999999995
Q 001585 80 KISQVDKDMVRDHILVFVAQVPPLLRVQLGECLKTIIHADYP-EQWPHLLDWVKHNLQDQ-----QVYGALFVLRILSRK 153 (1049)
Q Consensus 80 ~i~~~~k~~Ir~~Ll~~l~~~~~~ir~ql~~~i~~Ia~~d~P-~~Wp~Ll~~l~~~l~s~-----~~~~~L~~L~~i~k~ 153 (1049)
.++++.|..||+.+++++.+++..+ ++++.+++.|++.++| +.||++++.+.+.++++ ...+++.++..+++.
T Consensus 82 ~l~~~~~~~ik~~ll~~l~~~~~~~-~~~~~~l~~i~~~~~~~~~w~~ll~~l~~~l~~~~~~~~~r~~al~~l~~l~~~ 160 (876)
T 1qgr_A 82 AIDANARREVKNYVLHTLGTETYRP-SSASQCVAGIACAEIPVNQWPELIPQLVANVTNPNSTEHMKESTLEAIGYICQD 160 (876)
T ss_dssp TSCHHHHHHHHHHHHHHTTTCCSSS-CHHHHHHHHHHHHHGGGTCCTTHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHCCCCHHH-HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 6999999999999999867994788-999999999998467622568899999998708898799999999999999874
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 01688876544432210135644540599999999799999999975102996469999999999989865406871127
Q 001585 154 YEYQPTDSTSMKGYRIYEFKSDEERTPVYRIVEETFHHLLNIFNRLVQIVNPSLEVADLIKLICKIFWSSIYLEIPKQLL 233 (1049)
Q Consensus 154 ~~~~~~~~~~~~~~r~~~~~~~~~~~~l~~i~~~~~p~L~~~~~~~~~~~~~~~~~~~~~~~~lki~~~~~~~~lp~~~~ 233 (1049)
+. .+ . +...++.++..+.+.+.++.++ ..++..+++++..+... ++..+.
T Consensus 161 ~~------------------~~----~----~~~~~~~ll~~l~~~l~~~~~~---~~vr~~a~~~l~~~~~~-~~~~~~ 210 (876)
T 1qgr_A 161 ID------------------PE----Q----LQDKSNEILTAIIQGMRKEEPS---NNVKLAATNALLNSLEF-TKANFD 210 (876)
T ss_dssp SC------------------HH----H----HGGGHHHHHHHHHHHHSTTCSC---HHHHHHHHHHHHHHGGG-CHHHHT
T ss_pred CC------------------HH----H----HHHHHHHHHHHHHHHHCCCCCC---HHHHHHHHHHHHHHHHH-HHHHHH
T ss_conf 58------------------76----6----7867999999999861679998---89999999999999999-999887
Q ss_pred CHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH-H
Q ss_conf 923488999999997068999999999946652100278999999999999999489899983339999999996389-9
Q 001585 234 DPNVFNAWMILFLNVLERPVPSEGEPADPEQRKSWGWWKVKKWTVHILNRLYTRFGDLKLQNPENRAFAQMFQKNYAG-K 312 (1049)
Q Consensus 234 ~~~~l~~w~~~~~~~l~~~~p~~~~~~d~~~~~~~~~~k~kk~~~~~l~~l~~~~~~~~~~~~~~~~f~~~f~~~~~~-~ 312 (1049)
........++.+...+. ..+ ++++..+++++..+..+++. .+ .++++ .
T Consensus 211 ~~~~~~~il~~l~~~~~--------~~~---------~~vr~~a~~~l~~l~~~~~~------~~--------~~~~~~~ 259 (876)
T 1qgr_A 211 KESERHFIMQVVCEATQ--------CPD---------TRVRVAALQNLVKIMSLYYQ------YM--------ETYMGPA 259 (876)
T ss_dssp SHHHHHHHHHHHHHHTT--------CSS---------HHHHHHHHHHHHHHHHHSGG------GC--------HHHHTTT
T ss_pred HHHHHHHHHHHHHHHCC--------CCC---------HHHHHHHHHHHHHHHHHHHH------HH--------HHHHHHH
T ss_conf 17899999999998717--------998---------89999999999999998699------99--------9887789
Q ss_pred HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCH-------------------HHHHCHHHHHHHHHHHHHHCCCC
Q ss_conf 99999999997528863598999999999995227802-------------------45540433999999976413656
Q 001585 313 ILECHLNLLNRIRVGGYLPDRVTNLILQYLSNSISKNS-------------------MYNLLQPRLDVLLFEIVFPLMCF 373 (1049)
Q Consensus 313 ~~~~~~~~l~~~~~~~~~~~~~~~~~l~fl~~~~~~~~-------------------~~~~~~~~l~~li~~ii~p~l~l 373 (1049)
+++.++..+. ...+.++..+++||..+++... .+...++++..++..+ +..+.-
T Consensus 260 l~~~~~~~~~------~~~~~v~~~al~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l-l~~l~~ 332 (876)
T 1qgr_A 260 LFAITIEAMK------SDIDEVALQGIEFWSNVCDEEMDLAIEASEAAEQGRPPEHTSKFYAKGALQYLVPIL-TQTLTK 332 (876)
T ss_dssp HHHHHHHHHT------CSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCSSCCCCHHHHHHHHHHHHH-HHHTTC
T ss_pred HHHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH-HHHHHC
T ss_conf 9999999963------873499999999999998878767665100112477754201899999898870799-987531
Q ss_pred CHHHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH
Q ss_conf 93248644109789996706753444788889999999999740602099999999997412679976777732364999
Q 001585 374 NDNDQKLWDEDPHEYVRKGYDIIEDLYSPRTASMDFVSELVRKRGKENLQKFIQFIVGIFKRYDETPVEYKPYRQKDGAL 453 (1049)
Q Consensus 374 ~~~d~e~we~Dp~efi~~~~d~~~d~~s~R~aa~~ll~~L~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~~~keaal 453 (1049)
.++ |+ | ++.+++|.+|..++..++...++.+++.+++++.+.++. .+|+.|++++
T Consensus 333 ~~~-------d~--------~--~~~~~~r~~a~~~l~~l~~~~~~~~~~~~l~~l~~~l~~--------~~~~~r~~a~ 387 (876)
T 1qgr_A 333 QDE-------ND--------D--DDDWNPCKAAGVCLMLLATCCEDDIVPHVLPFIKEHIKN--------PDWRYRDAAV 387 (876)
T ss_dssp CCS-------SC--------C--TTCCCHHHHHHHHHHHHHHHHGGGGHHHHHHHHHHHTTC--------SSHHHHHHHH
T ss_pred CCC-------CC--------C--CCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC--------CCHHHHHHHH
T ss_conf 334-------44--------5--452179999999999999877586699999999988469--------9828999999
Q ss_pred HHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCC---CHHHHHHHHHHHHHCCCCCCC
Q ss_conf 99999988612179733569999998322036798741059999999970105668---933799999999841899997
Q 001585 454 LAIGALCDKLKQTEPYKSELERMLVQHVFPEFSSPVGHLRAKAAWVAGQYAHINFS---DQNNFRKALHSVVSGLRDPEL 530 (1049)
Q Consensus 454 ~~lg~la~~l~~~~~~~~~~e~~l~~~v~p~l~~~~~~lr~ra~~~l~~~~~~~f~---~~~~~~~~~~~l~~~l~d~~~ 530 (1049)
.++|.++..+... .+...+.. +...+++.+.++++.+|.+|||++|+|++..-. ....+..+++.++..+.++ .
T Consensus 388 ~~l~~i~~~~~~~-~~~~~~~~-~l~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~~~~~~~~l~~~l~~l~~~l~~~-~ 464 (876)
T 1qgr_A 388 MAFGCILEGPEPS-QLKPLVIQ-AMPTLIELMKDPSVVVRDTAAWTVGRICELLPEAAINDVYLAPLLQCLIEGLSAE-P 464 (876)
T ss_dssp HHHHHTSSSSCHH-HHHHHHHH-HHHHHHHHHTCSSHHHHHHHHHHHHHHHHHCGGGTSSTTTHHHHHHHHHHHTTSC-H
T ss_pred HHHHHHHCCCCHH-HHHHHHHH-HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHCCC-H
T ss_conf 9999997488777-89999999-9999999867997899999999999999857201144777999999999987588-8
Q ss_pred CHHHHHHHHHHHHHHHCC------------CCCCCCCCHHHHHHHHHHHHHHHCHH------HHHHHHHHHHHHCCCCCC
Q ss_conf 358979999999997134------------44210022299999999985111112------599999999997067644
Q 001585 531 PVRVDSVFALRSFVEACR------------DLNEIRPILPQLLDEFFKLMNEVENE------DLVFTLETIVDKFGEEMA 592 (1049)
Q Consensus 531 ~V~~~Aa~aL~~~~~~~~------------~~~~l~p~l~~il~~Ll~ll~~~~~e------~l~~~l~~iv~~~~~~i~ 592 (1049)
.||..|+.++..++.... ..+.+.||++.+++.|+.++...+.+ ....++..++...+.+..
T Consensus 465 ~v~~~a~~al~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~il~~L~~~l~~~~~~~~~~r~~~~~~l~~l~~~~~~~~~ 544 (876)
T 1qgr_A 465 RVASNVCWAFSSLAEAAYEAADVADDQEEPATYCLSSSFELIVQKLLETTDRPDGHQNNLRSSAYESLMEIVKNSAKDCY 544 (876)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSCTTSCCCCCCCSSTTTHHHHHHHHHHHTTSCSSCSTTHHHHHHHHHHHHHHTCCSTTH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHH
T ss_conf 89999999999999985020123444455540321576999999999997276742046999999999999997743118
Q ss_pred CCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH---HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCH--
Q ss_conf 42898999999999999830248999998458---8999999999999984048837799787648999999801362--
Q 001585 593 PYALGLCQNLAAAFWRCMNTAEADEDADDPGA---LAAVGCLRAISTILESVSRLPHLFVQIEPTLLPIMRRMLTTDG-- 667 (1049)
Q Consensus 593 p~~~~l~~~L~~~~~~~~~~~~~d~~~~~~~~---~~~~~~l~~i~~ii~~~~~~~~~~~~l~~~~~p~i~~il~~~~-- 667 (1049)
|+...++..+...+.....-.. ....++++. .....++.+++.++..++. ..+..+.+.++|.+..++....
T Consensus 545 ~~~~~l~~~l~~~l~~~~~~~~-~~~~~~d~~~~~~~~~~~~~~l~~l~~~~~~--~~~~~~~~~l~~~l~~~l~~~~~~ 621 (876)
T 1qgr_A 545 PAVQKTTLVIMERLQQVLQMES-HIQSTSDRIQFNDLQSLLCATLQNVLRKVQH--QDALQISDVVMASLLRMFQSTAGS 621 (876)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTT-SCCSTTHHHHHHHHHHHHHHHHHHHHTTSCH--HHHHTTHHHHHHHHHHHC-----C
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCH--HHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 9999999999999999998871-2488635999999999999999999998285--420578999999999999853688
Q ss_pred HHHHHHHHHHHHHHHHCC-CCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 248999999999976029-989987889899999997555-862485358865567614733333668860599999999
Q 001585 668 QEVFEEVLEIVSYMTFFS-PTISLEMWSLWPLMMEALADW-AIDFFPNILVPLDNYISRGTAHFLTCKEPDYQQSLWSMV 745 (1049)
Q Consensus 668 ~~~~e~~l~ll~~l~~~~-~~isp~l~~l~~~l~~~~~~~-~~~~l~~~~~~L~~~i~~~~~~~l~~~~~~~~~~i~~~~ 745 (1049)
....+.++..+..++... ..+.|.+..++|.+...+.+. ..+.....+.++...+....+.+. .+...++..+
T Consensus 622 ~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vr~~a~~~l~~l~~~~~~~~~-----~~~~~i~~~l 696 (876)
T 1qgr_A 622 GGVQEDALMAVSTLVEVLGGEFLKYMEAFKPFLGIGLKNYAEYQVCLAAVGLVGDLCRALQSNII-----PFCDEVMQLL 696 (876)
T ss_dssp CHHHHHHHHHHHHHHHHHGGGGGGGHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHHHGGGGH-----HHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHH
T ss_conf 88508999999999999876099999999999999875865087999999999999998878546-----4599999999
Q ss_pred HHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHCHHHHHHHHHHHHHH
Q ss_conf 9986189999863472445999999854567302028899999999972
Q 001585 746 SSIMADKNLEDGDIEPAPKLIEVVFQNCKGQVDHWVEPYLRITVERLRR 794 (1049)
Q Consensus 746 ~~~l~~~~~~~~~~~~a~~ll~~li~~~~~~~~~~l~~il~~~l~~L~~ 794 (1049)
.+.+.+......-+..++..+..+...+++.+.+|++.++..+...+..
T Consensus 697 ~~~l~~~~~~~~~~~~~~~~l~~i~~~~g~~~~~~l~~~~~~l~~~~~~ 745 (876)
T 1qgr_A 697 LENLGNENVHRSVKPQILSVFGDIALAIGGEFKKYLEVVLNTLQQASQA 745 (876)
T ss_dssp HHHHTCTTSCGGGHHHHHHHHHHHHHHHGGGGGGGHHHHHHHHHHHHTC
T ss_pred HHHHCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHC
T ss_conf 9974871233876399999999999970352799999999999999855
No 8
>4hat_C Exportin-1; heat repeat, nuclear export, RAN-ranbp1, LMB, leptomycin B, protein transport-antibiotic complex; HET: GNP LMB; 1.78A {Saccharomyces cerevisiae} PDB: 4hau_C* 4hav_C* 4hb2_C* 4hax_C* 4haw_C* 4hay_C* 4hb3_C* 4haz_C* 4hb4_C* 3m1i_C* 4hb0_C* 4gmx_C* 4gpt_C* 3vyc_A 2l1l_B
Probab=1.00 E-value=1 Score=331.42 Aligned_cols=742 Identities=12% Similarity=0.152 Sum_probs=429.5
Q ss_pred CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 99589999999714999888999999999710698719999999971486834679999999775630378888886899
Q 001585 1 MDLPSLALILQGALSPNPEERKAAEHSLNQFQYTPQHLVRLLQIIVDNNCDLSVRQVASIHFKNFIAKNWAPHEPNEQQK 80 (1049)
Q Consensus 1 md~~~l~~~L~~tls~d~~~r~~AE~~L~~~~~~p~f~~~Ll~i~~~~~~~~~iR~~Aai~lKn~I~~~W~~~~~~~~~~ 80 (1049)
||+++|.+++...++|+++.|++|+++|++++++|+++..+.+++.+++ +..+|++|+++|||.|+++|. .
T Consensus 13 ~dv~~Le~av~~ly~p~~~~r~~A~~~L~~~q~sp~aw~~~~~iL~~s~-~~~vR~faa~~Lk~~I~~~W~--------~ 83 (1023)
T 4hat_C 13 LDIALLDQVVSTFYQGSGVQQKQAQEILTKFQDNPDAWQKADQILQFST-NPQSKFIALSILDKLITRKWK--------L 83 (1023)
T ss_dssp CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCTTGGGGHHHHHHHCC-CHHHHHHHHHHHHHHHHHHGG--------G
T ss_pred CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCC-CHHHHHHHHHHHHHHHHHHHH--------C
T ss_conf 9999999999998499959999999999998719548889999953899-889999999999999976111--------2
Q ss_pred CCHHHHHHHHHHHHHHHHC---C------CHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH--HHHHHHHHHHH
Q ss_conf 9967899999999989611---9------95889999999999997308998245799999971033--39889999999
Q 001585 81 ISQVDKDMVRDHILVFVAQ---V------PPLLRVQLGECLKTIIHADYPEQWPHLLDWVKHNLQDQ--QVYGALFVLRI 149 (1049)
Q Consensus 81 i~~~~k~~Ir~~Ll~~l~~---~------~~~ir~ql~~~i~~Ia~~d~P~~Wp~Ll~~l~~~l~s~--~~~~~L~~L~~ 149 (1049)
+++++|..||+.+++.+.. . ++.++++++.+++.|++++||+.||++++++++.++++ ....+|..|..
T Consensus 84 L~~e~~~~Ir~~Ll~~l~~~~~~~~~i~~~~~i~nKLa~~la~I~~~~~p~~Wp~~l~dL~~~l~~~~~~~~~~L~iL~~ 163 (1023)
T 4hat_C 84 LPNDHRIGIRNFVVGMIISMCQDDEVFKTQKNLINKSDLTLVQILKQEWPQNWPEFIPELIGSSSSSVNVCENNMIVLKL 163 (1023)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHSHHHHHHCHHHHHHHHHHHHHHHHHHTTTTCTTHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHH
T ss_conf 99999999999999999986578522223199999999999999998573323289999999856997789999999999
Q ss_pred HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 99950168887654443221013564454059999999979999999997510299646999999999998986540687
Q 001585 150 LSRKYEYQPTDSTSMKGYRIYEFKSDEERTPVYRIVEETFHHLLNIFNRLVQIVNPSLEVADLIKLICKIFWSSIYLEIP 229 (1049)
Q Consensus 150 i~k~~~~~~~~~~~~~~~r~~~~~~~~~~~~l~~i~~~~~p~L~~~~~~~~~~~~~~~~~~~~~~~~lki~~~~~~~~lp 229 (1049)
+.++...+..+ +. ....+..+...+...+|.+.+++...+..... ..+...+++++.+++. .+|
T Consensus 164 L~EEV~~~~~~----------~l-~~~r~~~lk~~l~~~~~~I~~ll~~iL~~~~~----~~l~~~~L~~l~s~l~-WI~ 227 (1023)
T 4hat_C 164 LSEEVFDFSAE----------QM-TQAKALHLKNSMSKEFEQIFKLCFQVLEQGAS----SSLIVATLESLLRYLH-WIP 227 (1023)
T ss_dssp HHHHHHTSCTT----------TS-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSS----CHHHHHHHHHHHHHTT-TSC
T ss_pred HHHHHHHHHHC----------CC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC----HHHHHHHHHHHHHHHH-HCC
T ss_conf 99999871000----------01-59998889999999899999999999827898----8999999999999998-489
Q ss_pred CC-CCCHHHHH--------------HHHHHHHHHHCCCCCCCCCCCC--HHHHHHCCHHHHHHHHHHHH-H-------HH
Q ss_conf 11-27923488--------------9999999970689999999999--46652100278999999999-9-------99
Q 001585 230 KQ-LLDPNVFN--------------AWMILFLNVLERPVPSEGEPAD--PEQRKSWGWWKVKKWTVHIL-N-------RL 284 (1049)
Q Consensus 230 ~~-~~~~~~l~--------------~w~~~~~~~l~~~~p~~~~~~d--~~~~~~~~~~k~kk~~~~~l-~-------~l 284 (1049)
.. ..+.+.+. .-+..+..+++...| .+ ..+.. .+.+-..++..+ . .+
T Consensus 228 i~~i~~~~ll~~l~~~~L~~~~~r~~A~ecL~eIv~~~~~-----~~~~~~~~~---l~~lf~~~l~~l~~~i~p~~~~l 299 (1023)
T 4hat_C 228 YRYIYETNILELLSTKFMTSPDTRAITLKCLTEVSNLKIP-----QDNDLIKRQ---TVLFFQNTLQQIATSVMPVTADL 299 (1023)
T ss_dssp THHHHSSSHHHHHHTHHHHSHHHHHHHHHHHHHHHTSCCC-----SSCHHHHHH---HHHHHHHHHHHHHHHTCCTTCCH
T ss_pred HHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCC-----CCHHHHHHH---HHHHHHHHHHHHHHHHCCCCCHH
T ss_conf 9875144499999998769878899999999999804257-----855778899---99999999999999737974128
Q ss_pred HHHHCCCCCCCHHH-HHHHHHH---HHHHH---------HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCC--
Q ss_conf 99948989998333-9999999---99638---------999999999999752886359899999999999522780--
Q 001585 285 YTRFGDLKLQNPEN-RAFAQMF---QKNYA---------GKILECHLNLLNRIRVGGYLPDRVTNLILQYLSNSISKN-- 349 (1049)
Q Consensus 285 ~~~~~~~~~~~~~~-~~f~~~f---~~~~~---------~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~fl~~~~~~~-- 349 (1049)
..+|.....-+.++ ..++..| ...+. .+++...+..+-.... .....+...+++||....+.-
T Consensus 300 ~~~~~~~~~~D~e~~~~l~~l~~~~~e~~~~li~~~~~~~~~l~~~l~~Ll~~~~--~~d~ei~~~tl~FW~~L~~~l~~ 377 (1023)
T 4hat_C 300 KATYANANGNDQSFLQDLAMFLTTYLARNRALLESDESLRELLLNAHQYLIQLSK--IEERELFKTTLDYWHNLVADLFY 377 (1023)
T ss_dssp HHHHHHTCTTHHHHHHHHHHHHHHHHHHHGGGGTSCGGGHHHHHHHHHHHHHHTT--SSCHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 9998626631199999999999999999999986791035899999999998618--99288999999999999999985
Q ss_pred --HHHHHCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHCCCCC---CCCCHHHHHHHHHHHHHHHCCCCHHHH
Q ss_conf --245540433999999976413656932486441097899967067534---447888899999999997406020999
Q 001585 350 --SMYNLLQPRLDVLLFEIVFPLMCFNDNDQKLWDEDPHEYVRKGYDIIE---DLYSPRTASMDFVSELVRKRGKENLQK 424 (1049)
Q Consensus 350 --~~~~~~~~~l~~li~~ii~p~l~l~~~d~e~we~Dp~efi~~~~d~~~---d~~s~R~aa~~ll~~L~~~~~~~~~~~ 424 (1049)
..+..++|.+..++..++ ..|++.+++. .+++|-.+++|....+.+ .+.+-| ++|..++.-.+..+++.
T Consensus 378 e~~~~~~~~~~~~~L~~vli-~km~~P~e~~-ive~d~~~~~~e~~~d~d~~~~f~~~R----d~L~~l~~l~~~~~~~~ 451 (1023)
T 4hat_C 378 EPLKKHIYEEICSQLRLVII-ENMVRPEEVL-VVENDEGEIVREFVKESDTIQLYKSER----EVLVYLTHLNVIDTEEI 451 (1023)
T ss_dssp STTTGGGGHHHHHHHHHHHH-HSCCCCTTCC-EEECTTSCEEECSSCCGGGHHHHHHHH----HHHHHHHHHCHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHH-HHCCCCCCCC-CCCCCCCCHHHHHCCCHHHHHHHHHHH----HHHHHHHCCCHHHHHHH
T ss_conf 65788889999999999999-8657982026-677888608887144558899999999----99999860687899999
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC--CCCHHHHHHHHHHHHCCCCC-----CCCCCHHHHHH
Q ss_conf 999999974126799767777323649999999998861217--97335699999983220367-----98741059999
Q 001585 425 FIQFIVGIFKRYDETPVEYKPYRQKDGALLAIGALCDKLKQT--EPYKSELERMLVQHVFPEFS-----SPVGHLRAKAA 497 (1049)
Q Consensus 425 l~~~i~~~l~~~~~~~~~~~~~~~keaal~~lg~la~~l~~~--~~~~~~~e~~l~~~v~p~l~-----~~~~~lr~ra~ 497 (1049)
+++.+.+.+.. + ..+|+.+||+++++|++++++.+. .++..++-++ ++.... ++.+.+|..+|
T Consensus 452 ~~~~l~~~l~~----~--~~~W~~~EA~~~a~gaIa~~~~~~~e~~~l~~vi~~----Ll~l~~~~~~~d~k~~v~~t~~ 521 (1023)
T 4hat_C 452 MISKLARQIDG----S--EWSWHNINTLSWAIGSISGTMSEDTEKRFVVTVIKD----LLDLCVKKRGKDNKAVVASDIM 521 (1023)
T ss_dssp HHHHHHHHHSS----T--TCCHHHHHHHHHHHHHTTTSSCHHHHHHHHHHHHHH----HHHHHHHCCSHHHHHHHHHHHH
T ss_pred HHHHHHHHHCC----C--CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH----HHHHHHCCCCCCCHHHHHHHHH
T ss_conf 99999998548----8--788899989999999997689815578889999999----9975410346762599999999
Q ss_pred HHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCC------CCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 9999701056689337999999998418999973589799999999971344------4210022299999999985111
Q 001585 498 WVAGQYAHINFSDQNNFRKALHSVVSGLRDPELPVRVDSVFALRSFVEACRD------LNEIRPILPQLLDEFFKLMNEV 571 (1049)
Q Consensus 498 ~~l~~~~~~~f~~~~~~~~~~~~l~~~l~d~~~~V~~~Aa~aL~~~~~~~~~------~~~l~p~l~~il~~Ll~ll~~~ 571 (1049)
|++|+|++|.-.+++.+..+++.++..|.++++.|+..||.|+..+|+.+.. .....||++++++.+.......
T Consensus 522 ~~lGry~~wl~~~~~~L~~vl~~L~~~l~~~~~~v~~~A~~al~~l~~~c~~~l~~~~~~e~~p~~~~il~~l~~~~~~l 601 (1023)
T 4hat_C 522 YVVGQYPRFLKAHWNFLRTVILKLFEFMHETHEGVQDMACDTFIKIVQKCKYHFVIQQPRESEPFIQTIIRDIQKTTADL 601 (1023)
T ss_dssp HHHHTCHHHHHHCHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHHTHHHHSCCTTCSSCHHHHHHHTHHHHHTTS
T ss_pred HHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHC
T ss_conf 99999999986167989999999999861698789999999999999998887613577778606999999999998847
Q ss_pred CHHH---HHHHHHHHHHHCCCCC--CCCHHHHHHHHHHHHHHHHHCCCCCCCC--CCHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 1125---9999999999706764--4428989999999999998302489999--9845889999999999999840488
Q 001585 572 ENED---LVFTLETIVDKFGEEM--APYALGLCQNLAAAFWRCMNTAEADEDA--DDPGALAAVGCLRAISTILESVSRL 644 (1049)
Q Consensus 572 ~~e~---l~~~l~~iv~~~~~~i--~p~~~~l~~~L~~~~~~~~~~~~~d~~~--~~~~~~~~~~~l~~i~~ii~~~~~~ 644 (1049)
+... +..++.+++...+.+- ..+...++..+...+.++.+....+|.- |.+.......+++|.+.+..+++.
T Consensus 602 ~~~~~~~lyeai~~vi~~~~~~~~~~~~l~~L~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~l~~il~~~~~v~~~lg~- 680 (1023)
T 4hat_C 602 QPQQVHTFYKACGIIISEERSVAERNRLLSDLMQLPNMAWDTIVEQSTANPTLLLDSETVKIIANIIKTNVAVCTSMGA- 680 (1023)
T ss_dssp CHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHTHHHHHHHHHHHHHHHHCTTGGGCHHHHHHHHHHHHHHHHHHHHHGG-
T ss_pred CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCH-
T ss_conf 9888999999999999858877448999999988589999999998722725412878899999999999999998268-
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCC-C--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 3779978764899999980136224899999999997602998-9--987889899999997555862485358865567
Q 001585 645 PHLFVQIEPTLLPIMRRMLTTDGQEVFEEVLEIVSYMTFFSPT-I--SLEMWSLWPLMMEALADWAIDFFPNILVPLDNY 721 (1049)
Q Consensus 645 ~~~~~~l~~~~~p~i~~il~~~~~~~~e~~l~ll~~l~~~~~~-i--sp~l~~l~~~l~~~~~~~~~~~l~~~~~~L~~~ 721 (1049)
..+..+. .++|.+.. ++.-.-++++..+..... + .|. -..+++ .-.++++.+..|
T Consensus 681 -~f~~~~~-~i~~~~l~--------~y~~~s~~i~~~~~~~g~~~~~~~~-----~r~~r~-------ik~~il~l~~~~ 738 (1023)
T 4hat_C 681 -DFYPQLG-HIYYNMLQ--------LYRAVSSMISAQVAAEGLIATKTPK-----VRGLRT-------IKKEILKLVETY 738 (1023)
T ss_dssp -GGHHHHH-HHHHHHHH--------HHHHHHHHHHHHHHHHCGGGGGSHH-----HHHHHH-------HHHHHHHHHHHH
T ss_pred -HHHHHHH-HHHHHHHH--------HHHHHHHHHHHHHHHCCCHHHCCHH-----HHHHHH-------HHHHHHHHHHHH
T ss_conf -8999999-99999999--------9999999999999847942531688-----888899-------999999999999
Q ss_pred HHCCCC--CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHCHHHHHHHHHH----HHHH-
Q ss_conf 614733--333668860599999999998618999986347244599999985456730202889999999----9972-
Q 001585 722 ISRGTA--HFLTCKEPDYQQSLWSMVSSIMADKNLEDGDIEPAPKLIEVVFQNCKGQVDHWVEPYLRITVE----RLRR- 794 (1049)
Q Consensus 722 i~~~~~--~~l~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~~a~~ll~~li~~~~~~~~~~l~~il~~~l~----~L~~- 794 (1049)
+.+.++ .+...--+..++.++.-+.+.. +...+ ..+..+..+++.+++..+.+.++.|+.+++. .+++
T Consensus 739 i~~~~~~~~~~~~~~~~l~~~vl~dY~~~~--~~~r~---~~vL~l~s~iv~~~~~~~~~~~~~il~~vf~~Tl~mi~~~ 813 (1023)
T 4hat_C 739 ISKARNLDDVVKVLVEPLLNAVLEDYMNNV--PDARD---AEVLNCMTTVVEKVGHMIPQGVILILQSVFECTLDMINKD 813 (1023)
T ss_dssp HHHCSCHHHHHHHTHHHHHHHHHHHHHHSC--GGGCC---HHHHHHHHHHHHHHGGGCHHHHHHHHHHHHHHHHHHHSSC
T ss_pred HHCCCCHHHHHHHHHHHHHHHHHHHHHHCC--HHHCC---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 962798899999867889999998887287--20103---8899999999998877410156899999999999998556
Q ss_pred -HHHHHHHHHHHHHHHHHHHHCHHHHHH
Q ss_conf -124489999999999987019799999
Q 001585 795 -AEKSYLKCLLVQVIADALYYNSSLTLS 821 (1049)
Q Consensus 795 -~~~~~~~~~~l~v~~~~~~~~p~~~l~ 821 (1049)
...|..+..+...+.++.-+.+..+++
T Consensus 814 ~~~~Pe~r~~ff~ll~~~~~~~f~~~~~ 841 (1023)
T 4hat_C 814 FTEYPEHRVEFYKLLKVINEKSFAAFLE 841 (1023)
T ss_dssp SSSSHHHHHHHHHHHHHHHHHCTHHHHT
T ss_pred CCCCHHHHHHHHHHHHHHHHHCHHHHHC
T ss_conf 2229498999999999999977699974
No 9
>3ibv_A Exportin-T; karyopherin, heat repeat, cytoplasm, nucleus, RNA- binding, transport, tRNA processing, tRNA-binding, RNA binding protein; 3.10A {Schizosaccharomyces pombe} PDB: 3icq_T*
Probab=1.00 E-value=1 Score=318.74 Aligned_cols=745 Identities=13% Similarity=0.126 Sum_probs=422.1
Q ss_pred CCHHHHHHHHHHHCCC--CHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCC-CHHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 9958999999971499--9888999999999710698719999999971486-834679999999775630378888886
Q 001585 1 MDLPSLALILQGALSP--NPEERKAAEHSLNQFQYTPQHLVRLLQIIVDNNC-DLSVRQVASIHFKNFIAKNWAPHEPNE 77 (1049)
Q Consensus 1 md~~~l~~~L~~tls~--d~~~r~~AE~~L~~~~~~p~f~~~Ll~i~~~~~~-~~~iR~~Aai~lKn~I~~~W~~~~~~~ 77 (1049)
||++++.++++.+++| |++.|++|+++|++++++|+++..+..++.+.+. +..+|++|+..|||.|+ .
T Consensus 3 m~~~~v~~Al~~~~~p~sd~~~r~~A~~~L~~~q~sp~aw~~~~~iL~~~~~~~~~vr~fa~~~L~~~I~---~------ 73 (980)
T 3ibv_A 3 MSAQDVENAVEAALDPSVGPIIKQQATDFIGSLRSSSTGWKICHEIFSEKTKYKPSTRLICLQTLSEKVR---E------ 73 (980)
T ss_dssp CHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHHSTTHHHHHHHHTTCTTTSCHHHHHHHHHHHHHHHH---H------
T ss_pred CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH---H------
T ss_conf 9999999999998489999999999999999987394599999999837999989999999999999987---5------
Q ss_pred CCCCCHH----HHHHHHHHHHHHHHC-----CCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH-H---HHHHH
Q ss_conf 8999967----899999999989611-----995889999999999997308998245799999971033-3---98899
Q 001585 78 QQKISQV----DKDMVRDHILVFVAQ-----VPPLLRVQLGECLKTIIHADYPEQWPHLLDWVKHNLQDQ-Q---VYGAL 144 (1049)
Q Consensus 78 ~~~i~~~----~k~~Ir~~Ll~~l~~-----~~~~ir~ql~~~i~~Ia~~d~P~~Wp~Ll~~l~~~l~s~-~---~~~~L 144 (1049)
++++ ++..||+.+++.+.. .++.||++++.+++.|+.++||..||++++++++.++++ . +...|
T Consensus 74 ---l~~e~~~~~~~~lr~~ll~~l~~~~~~~~~~~IrnKL~~~la~l~~~~~p~~Wp~~i~~l~~~~~~~~~~~~~~~~L 150 (980)
T 3ibv_A 74 ---WNNESNLLELQMIRDSVWSYIKELSFLDEPAYISNAVQHLLTLLFLQLYPSNWNDFFASLQGVIAASSQSEFSNFYL 150 (980)
T ss_dssp ---CCTTTSHHHHHHHHHHHHHHHHHCCSTTSCTHHHHHHHHHHHHHHHHHTTTTCTTHHHHHHHHHHHHCCHHHHHHHH
T ss_pred ---CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHH
T ss_conf ---88201088999999999999997057778679999999999999998685447539999999856897268999999
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCCCCCCC-CCCC--CC-CHHHHH-----HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
Q ss_conf 9999999950168887654443221013-5644--54-059999-----9999799999999975102996469999999
Q 001585 145 FVLRILSRKYEYQPTDSTSMKGYRIYEF-KSDE--ER-TPVYRI-----VEETFHHLLNIFNRLVQIVNPSLEVADLIKL 215 (1049)
Q Consensus 145 ~~L~~i~k~~~~~~~~~~~~~~~r~~~~-~~~~--~~-~~l~~i-----~~~~~p~L~~~~~~~~~~~~~~~~~~~~~~~ 215 (1049)
++|..+.++.... .. ++.+ .| ..+... ++.+++.++.++.+...+. + ..+...
T Consensus 151 riL~~i~EEv~~~-------------~~~~~~~~~~r~~~lkd~m~~~~~~~i~~~~~~iL~~~~~~~--~---~~l~~~ 212 (980)
T 3ibv_A 151 KVLLSIGDEIADS-------------LVLKTDVQIQKDNLVKDAIRANDMSDIVSFVYEMMLAYSNAK--N---YGTVGL 212 (980)
T ss_dssp HHHHHHHHHHCCC-------------CSCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTT--C---HHHHHH
T ss_pred HHHHHHHHHHHHC-------------CCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCC--C---HHHHHH
T ss_conf 9999858999723-------------236678877665999999986628899999999999874128--8---999999
Q ss_pred HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHH--------
Q ss_conf 999989865406871127923488999999997068999999999946652100278999999999999999--------
Q 001585 216 ICKIFWSSIYLEIPKQLLDPNVFNAWMILFLNVLERPVPSEGEPADPEQRKSWGWWKVKKWTVHILNRLYTR-------- 287 (1049)
Q Consensus 216 ~lki~~~~~~~~lp~~~~~~~~l~~w~~~~~~~l~~~~p~~~~~~d~~~~~~~~~~k~kk~~~~~l~~l~~~-------- 287 (1049)
+++|+.+++. .+|.... -+ .++++.+...++.+ .++..++++++.++.+
T Consensus 213 ~L~~l~s~i~-wi~~~~i--~~-~~ll~~l~~~L~~~-------------------~~r~~A~ecL~ei~~k~~~~~~k~ 269 (980)
T 3ibv_A 213 CLQVYAQWVS-WININLI--VN-EPCMNLLYSFLQIE-------------------ELRCAACETMTEIVNKKMKPLEKL 269 (980)
T ss_dssp HHHHHHHHTT-TSCHHHH--HC-HHHHHHHHHHTTSH-------------------HHHHHHHHHHHHHHHSCCCHHHHH
T ss_pred HHHHHHHHHH-HCCHHHH--HC-CHHHHHHHHHCCCH-------------------HHHHHHHHHHHHHHHCCCCHHHHH
T ss_conf 9999999986-5277865--03-01899999982886-------------------779999999999997378956689
Q ss_pred -----------HCCCC--CCCHHH-HHHHHHHHH---H-----------------HHHHHHHHHHHHHHHHHCCCCCCHH
Q ss_conf -----------48989--998333-999999999---6-----------------3899999999999975288635989
Q 001585 288 -----------FGDLK--LQNPEN-RAFAQMFQK---N-----------------YAGKILECHLNLLNRIRVGGYLPDR 333 (1049)
Q Consensus 288 -----------~~~~~--~~~~~~-~~f~~~f~~---~-----------------~~~~~~~~~~~~l~~~~~~~~~~~~ 333 (1049)
+.... .-+.++ +.+++.|.. . -+...+..++..+-..... ..+.
T Consensus 270 ~li~~l~L~~~~~~l~~~~~D~d~~~~la~L~~~~ge~l~~~~~~~~~~~~~~~~~~~~~l~~ll~~lL~~~~~--~~de 347 (980)
T 3ibv_A 270 NLLNILNLNLFFSKSQEQSTDPNFDEHVAKLINAQGVELVAIKSDPSELSPELKENCSFQLYNLFPYLIRYLSD--DYDE 347 (980)
T ss_dssp HHHHHHHHHHHHCC-----CCHHHHHHHHHHHHHHHHHHHHHHTSCC--CHHHHHHHHHHHHHTHHHHHHHHTC--SSHH
T ss_pred HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC--CCHH
T ss_conf 99999757999998744555689999999999999999998735865555255666899999999999999679--8063
Q ss_pred HHHHHHHHHHHHCCCC-------HHHHHCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHCCCCCCCCCHHHHH
Q ss_conf 9999999999522780-------245540433999999976413656932486441097899967067534447888899
Q 001585 334 VTNLILQYLSNSISKN-------SMYNLLQPRLDVLLFEIVFPLMCFNDNDQKLWDEDPHEYVRKGYDIIEDLYSPRTAS 406 (1049)
Q Consensus 334 ~~~~~l~fl~~~~~~~-------~~~~~~~~~l~~li~~ii~p~l~l~~~d~e~we~Dp~efi~~~~d~~~d~~s~R~aa 406 (1049)
+...++.||...+..- .....+++++..|+..++ ..|++.+++ .|++|. +.|+.+++...|...
T Consensus 348 Vs~~t~~Fw~~~l~~~~~~~~~~~~~~~~~~~l~~Ll~~li-~k~~yp~d~--~~~~~~------d~ed~~~F~e~Rk~l 418 (980)
T 3ibv_A 348 TSTAVFPFLSDLLVSLRKESSSKELSASLKEFLKSLLEAII-KKMKYDESQ--EWDDDP------DSEEEAEFQEMRKKL 418 (980)
T ss_dssp HHHTTHHHHHHHHHHHHHHTTSCCCCHHHHHHHHHHHHHHH-HTTSCCTTC--CCCCCS------SSSTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH-HHCCCCCCC--CCCCCC------CHHHHHHHHHHHHHH
T ss_conf 99999999999999987244223433789999999999999-872289865--666665------554799999999999
Q ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC-------CCCCHHHHHHHHHH
Q ss_conf 99999999740602099999999997412679976777732364999999999886121-------79733569999998
Q 001585 407 MDFVSELVRKRGKENLQKFIQFIVGIFKRYDETPVEYKPYRQKDGALLAIGALCDKLKQ-------TEPYKSELERMLVQ 479 (1049)
Q Consensus 407 ~~ll~~L~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~~~keaal~~lg~la~~l~~-------~~~~~~~~e~~l~~ 479 (1049)
..+++.+....++.++..+..++...+++...+. ...+|+.+||++++++++++++.. .++....+.+++..
T Consensus 419 ~~l~d~~~~l~~~~~l~~~~~~i~~~l~~~l~~~-~~~~W~~~EaaL~~l~~iaE~i~~~~~~~~~~~~~lp~l~~ll~~ 497 (980)
T 3ibv_A 419 KIFQDTINSIDSSLFSSYMYSAITSSLSTAATLS-PENSWQLIEFALYETYIFGEGLRGPDAFFNEVDKSPTVLSQILAL 497 (980)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTTSC-HHHHHHHHHHHHHHHHHTTTTCCSGGGTBCSSSCCBCHHHHHHHH
T ss_pred HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCC-CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 9999999964849888889999999999871555-899879999999999998765343123667552106899999999
Q ss_pred HHCCCCC-CCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH--CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 3220367-9874105999999997010566893379999999984--189999735897999999999713444210022
Q 001585 480 HVFPEFS-SPVGHLRAKAAWVAGQYAHINFSDQNNFRKALHSVVS--GLRDPELPVRVDSVFALRSFVEACRDLNEIRPI 556 (1049)
Q Consensus 480 ~v~p~l~-~~~~~lr~ra~~~l~~~~~~~f~~~~~~~~~~~~l~~--~l~d~~~~V~~~Aa~aL~~~~~~~~~~~~l~p~ 556 (1049)
.+-.... .+||.+|..+||++|+|++|.-.+++.+..+++.++. .+.+++..|+..||.++.+||+.+ +..+.||
T Consensus 498 ll~s~i~~~~hp~V~~~~~~~l~rys~~~~~~~~~l~~~L~~ll~~~gl~~~~~~V~~~a~~af~~f~~~~--~~~L~~~ 575 (980)
T 3ibv_A 498 VTTSQVCRHPHPLVQLLYMEILVRYASFFDYESAAIPALIEYFVGPRGIHNTNERVRPRAWYLFYRFVKSI--KKQVVNY 575 (980)
T ss_dssp HHHSSTTTCCCHHHHHHHHHHHHHTGGGGGTCCTTHHHHHHHHTSTTTTTCCCTTTHHHHHHHHHHHHHHT--TTTCSSS
T ss_pred HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH--HHHHHHH
T ss_conf 98478888997899999999999999998519354999999982600266997659999999999999986--6874458
Q ss_pred HHHHHHHHHHHHHH-H---C-----------------HH---HHHHHHHHHHHHCCC---CCCCCHHHHHHHHHHHHHHH
Q ss_conf 29999999998511-1---1-----------------12---599999999997067---64442898999999999999
Q 001585 557 LPQLLDEFFKLMNE-V---E-----------------NE---DLVFTLETIVDKFGE---EMAPYALGLCQNLAAAFWRC 609 (1049)
Q Consensus 557 l~~il~~Ll~ll~~-~---~-----------------~e---~l~~~l~~iv~~~~~---~i~p~~~~l~~~L~~~~~~~ 609 (1049)
++++++.+-.++.. . + .+ .+..++..++...+. +...+...+++.|.+.+.+.
T Consensus 576 ~~~il~~l~~lL~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~L~eaig~li~~~~~~~e~~~~~l~~ll~pl~~~l~~~ 655 (980)
T 3ibv_A 576 TESSLAMLGDLLNISVSPVTDMDAPVPTLNSSIRNSDFNSQLYLFETVGVLISSGNLTPEEQALYCDSLINALIGKANAA 655 (980)
T ss_dssp HHHHHHHTTGGGCCCCCCCCC--CSSCCHHHHHHTTTHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999986168678887532222104542036771478899999999992789987899999999999999999998
Q ss_pred HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 83024899999845889999999999999840488377997876489999998013622489999999999760299899
Q 001585 610 MNTAEADEDADDPGALAAVGCLRAISTILESVSRLPHLFVQIEPTLLPIMRRMLTTDGQEVFEEVLEIVSYMTFFSPTIS 689 (1049)
Q Consensus 610 ~~~~~~d~~~~~~~~~~~~~~l~~i~~ii~~~~~~~~~~~~l~~~~~p~i~~il~~~~~~~~e~~l~ll~~l~~~~~~is 689 (1049)
......+ +++.. ..+-++-+++++.+.....+.. ..++.
T Consensus 656 l~~~~~~---~~~~~-~i~~~i~al~~lakgf~~~~~~-------------------------------------~~p~~ 694 (980)
T 3ibv_A 656 LSSDLSA---LENII-SVYCSLMAIGNFAKGFPARGSE-------------------------------------EVAWL 694 (980)
T ss_dssp HTTSCC-----CHHH-HHHHHHHHHHHHHHTSCSCC-C-------------------------------------CCSHH
T ss_pred HHHCCCC---CCHHH-HHHHHHHHHHHHHCCCCCCCCC-------------------------------------CCCHH
T ss_conf 8641358---63888-9999999999973167864688-------------------------------------88189
Q ss_pred HHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH
Q ss_conf 878898999999975558--624853588655676147333336688605999999999986189999863472445999
Q 001585 690 LEMWSLWPLMMEALADWA--IDFFPNILVPLDNYISRGTAHFLTCKEPDYQQSLWSMVSSIMADKNLEDGDIEPAPKLIE 767 (1049)
Q Consensus 690 p~l~~l~~~l~~~~~~~~--~~~l~~~~~~L~~~i~~~~~~~l~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~~a~~ll~ 767 (1049)
+.+|+.++.+..++..+. ..........++-.+..-...++ +++..+...+...+. ..+......++.
T Consensus 695 ~~f~~~~~~il~~l~~~~~~~~irea~~~~~~r~i~~lg~~~~-----p~lp~~i~~ll~~~~-----~~e~~~fL~l~~ 764 (980)
T 3ibv_A 695 ASFNKASDEIFLILDRMGFNEDIRGAVRFTSGRIINVVGPDML-----PKVPQLISILLNSID-----MNELVDVLSFIS 764 (980)
T ss_dssp HHHHHHHHHHHHHHHHSCCSHHHHHHHHHHHHHHTTTTHHHHT-----TTHHHHHHHHHHHCC-----TTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHH-----HHHHHHHHHHHHCCC-----HHHHHHHHHHHH
T ss_conf 9999999999999882678678999999999999997557679-----878999999983698-----799999999999
Q ss_pred HHHHHCCCCCHHCHHHHHHHHHHHH----HHH--------HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHH
Q ss_conf 9998545673020288999999999----721--------2448999999999998701979999999960840999999
Q 001585 768 VVFQNCKGQVDHWVEPYLRITVERL----RRA--------EKSYLKCLLVQVIADALYYNSSLTLSILHKLGVATEVFNL 835 (1049)
Q Consensus 768 ~li~~~~~~~~~~l~~il~~~l~~L----~~~--------~~~~~~~~~l~v~~~~~~~~p~~~l~~L~~~~~~~~~~~~ 835 (1049)
.+++.++..+.+.+..++..++.++ ... ....++..++..+..++-.+-..++-.-.+.+.++.++..
T Consensus 765 qli~~f~~~~~~~l~~ll~~l~~~if~~l~~~~~~td~~r~~~~l~r~~~~fl~~i~~~~~~~v~~s~~n~~~l~~~l~~ 844 (980)
T 3ibv_A 765 QLIHIYKDNMMEITNRMLPTLLMRIFSSLSAAPQGTDDAVKQNDLRKSYISFILQLLNKGFGSILFTEENQVYFDPLINS 844 (980)
T ss_dssp HHHHHTTTTSHHHHHHHHHHHHHHHHHHTTC----CCHHHHHHHHHHHHHHHHHHHHHTTCTGGGGSHHHHTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHH
T ss_conf 99999988899999988999999999971689899479999999999999999999837860452177656789999999
Q ss_pred HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCC
Q ss_conf 9998999884054557642025698899999873126
Q 001585 836 WFQMLQQVKKNGLRVNFKREHDKKVCCLGLTSLLALT 872 (1049)
Q Consensus 836 w~~~~~~~~~~~~~~~~~~~~d~Kl~~lal~~Ll~~~ 872 (1049)
.+.... .+......|+++.-|++++..-
T Consensus 845 l~~~a~---------~~~d~~~~K~a~~~l~~~v~~~ 872 (980)
T 3ibv_A 845 ILHFAN---------LVGEPATQKSSIALVSKMVSLW 872 (980)
T ss_dssp HHHHC--------------CHHHHHHHHHHHHHHHC-
T ss_pred HHHHHC---------CCCCHHHHHHHHHHHHHHHHHH
T ss_conf 999826---------6787489989999999999997
No 10
>3gjx_A Exportin-1; transport, cytoplasm, nucleus, RNA-binding, acetylation, GTP-binding, HOST-virus interaction, nucleotide-binding, phosphoprotein; HET: GTP; 2.50A {Mus musculus} PDB: 3nby_A* 3nbz_A* 3nc0_A* 3nc1_A* 3gb8_A
Probab=1.00 E-value=1 Score=317.67 Aligned_cols=589 Identities=11% Similarity=0.160 Sum_probs=355.3
Q ss_pred CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 99589999999714999888999999999710698719999999971486834679999999775630378888886899
Q 001585 1 MDLPSLALILQGALSPNPEERKAAEHSLNQFQYTPQHLVRLLQIIVDNNCDLSVRQVASIHFKNFIAKNWAPHEPNEQQK 80 (1049)
Q Consensus 1 md~~~l~~~L~~tls~d~~~r~~AE~~L~~~~~~p~f~~~Ll~i~~~~~~~~~iR~~Aai~lKn~I~~~W~~~~~~~~~~ 80 (1049)
||++.|.+++.+.++|+++.|++|+++|++++++|+++..+.+++.+. .+..+|++|++.|||.|+++|. .
T Consensus 25 ~Dv~~Le~lv~~ly~p~~~~r~qA~~~L~q~q~sp~aw~~~~~iL~~s-~~~~vR~fAa~~L~~~I~~~W~--------~ 95 (1073)
T 3gjx_A 25 LDINLLDNVVNCLYHGEGAQQRMAQEVLTHLKEHPDAWTRVDTILEFS-QNMNTKYYGLQILENVIKTRWK--------I 95 (1073)
T ss_dssp CSHHHHHHHHHTTTCSSHHHHHHHHHHHHTSSCCSCHHHHHTCC---C-CSHHHHHHHHHHHHHHHHHTGG--------G
T ss_pred CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCC-CCHHHHHHHHHHHHHHHHHHHH--------H
T ss_conf 999999999999829999999999999999872905899999994689-9899999999999999976466--------2
Q ss_pred CCHHHHHHHHHHHHHHHHC---------CCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH--HHHHHHHHHHH
Q ss_conf 9967899999999989611---------995889999999999997308998245799999971033--39889999999
Q 001585 81 ISQVDKDMVRDHILVFVAQ---------VPPLLRVQLGECLKTIIHADYPEQWPHLLDWVKHNLQDQ--QVYGALFVLRI 149 (1049)
Q Consensus 81 i~~~~k~~Ir~~Ll~~l~~---------~~~~ir~ql~~~i~~Ia~~d~P~~Wp~Ll~~l~~~l~s~--~~~~~L~~L~~ 149 (1049)
+++++|..||+.+++.+.. .++.++++++.+++.|++++||+.||++++++++.++++ ....+|.+|..
T Consensus 96 L~~e~~~~LR~~Ll~~l~~~~~~~~~~e~~~~vinKLa~~La~I~k~~~P~~Wp~fi~dLv~~~~~~~~~~~~~L~IL~~ 175 (1073)
T 3gjx_A 96 LPRNQCEGIKKYVVGLIIKTSSDPTCVEKEKVYIGKLNMILVQILKQEWPKHWPTFISDIVGASRTSESLCQNNMVILKL 175 (1073)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHTCGGGGTSCHHHHHHHHHHHHHHHHHHTTTTCTTHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHH
T ss_conf 99999999999999999987268532333468999999999999998683316089999999837998899999999999
Q ss_pred HHHHCCCCCCCCCCCCCCCCCCCC----CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 999501688876544432210135----6445405999999997999999999751029964699999999999898654
Q 001585 150 LSRKYEYQPTDSTSMKGYRIYEFK----SDEERTPVYRIVEETFHHLLNIFNRLVQIVNPSLEVADLIKLICKIFWSSIY 225 (1049)
Q Consensus 150 i~k~~~~~~~~~~~~~~~r~~~~~----~~~~~~~l~~i~~~~~p~L~~~~~~~~~~~~~~~~~~~~~~~~lki~~~~~~ 225 (1049)
+.++.. .++ ....+..+...+...+|.+++++...+.... + ..+...+++++..++.
T Consensus 176 L~EEV~---------------d~~~~~l~~~r~~~lk~~L~~~~~~Il~ll~~iL~~~~-~---~~lv~~~L~~L~~~~s 236 (1073)
T 3gjx_A 176 LSEEVF---------------DFSSGQITQVKAKHLKDSMCNEFSQIFQLCQFVMENSQ-N---APLVHATLETLLRFLN 236 (1073)
T ss_dssp HHHHHT---------------TSHHHHBCHHHHHHHHHHHHHTCHHHHHHHHHHHHHCC-C---HHHHHHHHHHHHHHTT
T ss_pred HHHHHH---------------HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-C---HHHHHHHHHHHHHHHH
T ss_conf 999998---------------51434230889999999999999999999998755568-8---7999999999999998
Q ss_pred -CCCCCCC-------------CCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHH-------H
Q ss_conf -0687112-------------792348899999999706899999999994665210027899999999999-------9
Q 001585 226 -LEIPKQL-------------LDPNVFNAWMILFLNVLERPVPSEGEPADPEQRKSWGWWKVKKWTVHILNR-------L 284 (1049)
Q Consensus 226 -~~lp~~~-------------~~~~~l~~w~~~~~~~l~~~~p~~~~~~d~~~~~~~~~~k~kk~~~~~l~~-------l 284 (1049)
.++...+ ..++....-+..+..++....+ +.++. ..++-..++..+.. +
T Consensus 237 WI~i~~i~~~~ll~~L~~~~L~~~~~r~aA~dcL~eIv~k~~~------~~~~~----~~~lf~~~~~~i~~ilp~~~~l 306 (1073)
T 3gjx_A 237 WIPLGYIFETKLISTLIYKFLNVPMFRNVSLKCLTEIAGVSVS------QYEEQ----FETLFTLTMMQLKQMLPLNTNI 306 (1073)
T ss_dssp TSCTHHHHSSSHHHHHHHHTSSSHHHHHHHHHHHHHHHHSCSG------GGHHH----HHHHHHHHHHHHHHHSCTTSCH
T ss_pred HCCHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCC------CHHHH----HHHHHHHHHHHHHHHCCCCHHH
T ss_conf 6589876054289999998669867899999999999964152------06899----9999999999998865882027
Q ss_pred HHHHCCCCCCCHHH-HHHHHH---HHHHHHH---------HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCC---
Q ss_conf 99948989998333-999999---9996389---------9999999999975288635989999999999952278---
Q 001585 285 YTRFGDLKLQNPEN-RAFAQM---FQKNYAG---------KILECHLNLLNRIRVGGYLPDRVTNLILQYLSNSISK--- 348 (1049)
Q Consensus 285 ~~~~~~~~~~~~~~-~~f~~~---f~~~~~~---------~~~~~~~~~l~~~~~~~~~~~~~~~~~l~fl~~~~~~--- 348 (1049)
...|.....-+.++ ..++.. |...+.. +.+...+..+-..+. .....+...+++||......
T Consensus 307 ~~~y~~~~~~d~e~~~~l~~~f~~~~e~~~~lIe~~p~~~~~l~~~l~~ll~~s~--~~d~ei~kitf~fW~~L~~~L~~ 384 (1073)
T 3gjx_A 307 RLAYSNGKDDEQNFIQNLSLFLCTFLKEHGQLLEKRLNLREALMEALHYMLLVSE--VEETEIFKICLEYWNHLAAELYR 384 (1073)
T ss_dssp HHHHHTCCTTHHHHHHHHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHTT--CSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 8887446551499999999999999999999983585424799999999999838--99199999999999999999986
Q ss_pred --------------------CHHHHHCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHH
Q ss_conf --------------------024554043399999997641365693248644109789996706753444788889999
Q 001585 349 --------------------NSMYNLLQPRLDVLLFEIVFPLMCFNDNDQKLWDEDPHEYVRKGYDIIEDLYSPRTASMD 408 (1049)
Q Consensus 349 --------------------~~~~~~~~~~l~~li~~ii~p~l~l~~~d~e~we~Dp~efi~~~~d~~~d~~s~R~aa~~ 408 (1049)
+..+..++|.+..+...+ +..|...++.. .-++|..|.+|+...+. +.-+.+.+-.+
T Consensus 385 e~~~~~~~~~~~~~~~~~~~~~~~~~y~~i~~~L~~vl-I~~m~~P~ev~-i~e~e~ge~~re~~~d~-~~~~ly~~mrd 461 (1073)
T 3gjx_A 385 ESPFSTSASPLLSGSQHFDIPPRRQLYLTVLSKVRLLM-VSRMAKPEEVL-VVENDQGEVVREFMKDT-DSINLYKNMRE 461 (1073)
T ss_dssp HCCSCCCCSSCTTSSCCSCSCHHHHTTHHHHHHHHHHH-HHTCCCSCCEE-EEECSSSCEEEEECSSC-HHHHHHHHHHH
T ss_pred HCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH-HHHCCCCCCCC-CCCCCCCHHHHHHHHHC-CHHHHHHHHHH
T ss_conf 14233344510022210010338999999999999999-98259994235-46765126899988613-21899999999
Q ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC--CCCCHHHHHHHHHHHHCCCCC
Q ss_conf 999999740602099999999997412679976777732364999999999886121--797335699999983220367
Q 001585 409 FVSELVRKRGKENLQKFIQFIVGIFKRYDETPVEYKPYRQKDGALLAIGALCDKLKQ--TEPYKSELERMLVQHVFPEFS 486 (1049)
Q Consensus 409 ll~~L~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~~~keaal~~lg~la~~l~~--~~~~~~~~e~~l~~~v~p~l~ 486 (1049)
.+..++.-.+..+...+++.+...++. +..+|...||+++++|+++..+.+ .+.+.+.+- +.++....
T Consensus 462 ~L~~lt~l~~~~~~~i~~~~l~~~~~~------~~~sW~~lea~~~aigaIag~~~~~~E~~~Lp~vi----~~Ll~L~e 531 (1073)
T 3gjx_A 462 TLVYLTHLDYVDTEIIMTKKLQNQVNG------TEWSWKNLNTLCWAIGSISGAMHEEDEKRFLVTVI----KDLLGLCE 531 (1073)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHHHHTS------CCCCHHHHHHHHHHHHHTTTSSCHHHHHHHHHHHH----HHHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHHHHHHHHHCC------CCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH----HHHHCCCC
T ss_conf 999870488899999999999998467------88887888399999999877278621002299999----99863414
Q ss_pred CC-----CCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCC------CCCCCC
Q ss_conf 98-----7410599999999701056689337999999998418999973589799999999971344------421002
Q 001585 487 SP-----VGHLRAKAAWVAGQYAHINFSDQNNFRKALHSVVSGLRDPELPVRVDSVFALRSFVEACRD------LNEIRP 555 (1049)
Q Consensus 487 ~~-----~~~lr~ra~~~l~~~~~~~f~~~~~~~~~~~~l~~~l~d~~~~V~~~Aa~aL~~~~~~~~~------~~~l~p 555 (1049)
.+ .+.++...||++|+|++|.-.+++.+..++..++..|.+++..|+..||.|+..+|..|.. .....|
T Consensus 532 ~~~~kd~k~~vas~i~~vlgrY~~wl~~h~~~L~~vl~~L~~~m~~~~~~vq~aA~~af~~i~~~C~~~lv~~~~~e~~p 611 (1073)
T 3gjx_A 532 QKRGKDNKAIIASNIMYIVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQKCRRHFVQVQVGEVMP 611 (1073)
T ss_dssp HSCSHHHHHHHHHHHHHHHHHCHHHHHHCHHHHHHHHHHHHHHTTCCSTTHHHHHHHHHHHHHHHTGGGGTSCCTTCSSC
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
T ss_conf 44434126999999999995007999867799999999999998449878999999999999999989875235554535
Q ss_pred CHHHHHHHHHHHHHHHCHHH---HHHHHHHHHHHCCCCC--CCCHHHHHHHHHHHHHHHHHCCCCCCC--CCCHHHHHHH
Q ss_conf 22999999999851111125---9999999999706764--442898999999999999830248999--9984588999
Q 001585 556 ILPQLLDEFFKLMNEVENED---LVFTLETIVDKFGEEM--APYALGLCQNLAAAFWRCMNTAEADED--ADDPGALAAV 628 (1049)
Q Consensus 556 ~l~~il~~Ll~ll~~~~~e~---l~~~l~~iv~~~~~~i--~p~~~~l~~~L~~~~~~~~~~~~~d~~--~~~~~~~~~~ 628 (1049)
|+.+|++.+-......+.+. +..++..++...+.+. ..+...+++.+.+.+.++.++...+++ .|.+......
T Consensus 612 ~i~~il~~~~~~~~~l~~~~~~~lyeav~~vi~~~p~~~~~~~~i~~Lm~~~~~~w~~l~~~~~~~~~~~~d~~~i~~l~ 691 (1073)
T 3gjx_A 612 FIDEILNNINTIICDLQPQQVHTFYEAVGYMIGAQTDQTVQEHLIEKYMLLPNQVWDSIIQQATKNVDILKDPETVKQLG 691 (1073)
T ss_dssp HHHHHHTSHHHHHTTCCHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHCGGGGGCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHH
T ss_conf 99999999999997469999999999999999859972029999999988999999999998621714205838999999
Q ss_pred HHHHHHHHHHHHHC
Q ss_conf 99999999998404
Q 001585 629 GCLRAISTILESVS 642 (1049)
Q Consensus 629 ~~l~~i~~ii~~~~ 642 (1049)
.+++|...+..+++
T Consensus 692 ~il~~n~~v~~~~g 705 (1073)
T 3gjx_A 692 SILKTNVRACKAVG 705 (1073)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHCC
T ss_conf 99965399884565
Done!