Query 001586
Match_columns 1049
No_of_seqs 798 out of 5237
Neff 7.2
Searched_HMMs 46136
Date Fri Mar 29 04:30:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001586.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/001586hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2040 Glycine dehydrogenase 100.0 3E-229 6E-234 1893.0 67.0 926 83-1036 37-975 (1001)
2 PRK12566 glycine dehydrogenase 100.0 7E-198 2E-202 1778.0 88.0 915 92-1035 7-931 (954)
3 TIGR00461 gcvP glycine dehydro 100.0 5E-193 1E-197 1750.0 92.7 913 101-1035 1-923 (939)
4 PLN02414 glycine dehydrogenase 100.0 4E-185 9E-190 1702.6 95.6 929 92-1035 29-963 (993)
5 PRK05367 glycine dehydrogenase 100.0 3E-180 6E-185 1670.7 91.9 914 93-1035 5-931 (954)
6 COG0403 GcvP Glycine cleavage 100.0 6E-116 1E-120 961.1 42.3 435 93-530 2-447 (450)
7 COG1003 GcvP Glycine cleavage 100.0 2E-103 4E-108 859.6 38.4 450 557-1030 29-496 (496)
8 PF02347 GDC-P: Glycine cleava 100.0 1E-102 3E-107 886.5 38.1 425 100-527 1-429 (429)
9 PF02347 GDC-P: Glycine cleava 100.0 1.8E-65 4E-70 583.0 32.5 403 514-965 5-429 (429)
10 COG0403 GcvP Glycine cleavage 100.0 8.1E-57 1.8E-61 494.8 33.0 409 516-968 15-447 (450)
11 PRK04366 glycine dehydrogenase 100.0 5.5E-56 1.2E-60 528.3 41.2 427 546-999 32-468 (481)
12 PRK00451 glycine dehydrogenase 100.0 1.5E-55 3.2E-60 522.8 43.2 422 100-528 2-443 (447)
13 PRK04366 glycine dehydrogenase 100.0 7.6E-55 1.6E-59 518.6 38.1 381 126-529 30-444 (481)
14 TIGR00461 gcvP glycine dehydro 100.0 1.6E-54 3.5E-59 531.4 39.4 403 105-529 413-863 (939)
15 PRK12566 glycine dehydrogenase 100.0 3.6E-52 7.7E-57 506.8 35.0 396 514-966 19-439 (954)
16 PRK05367 glycine dehydrogenase 100.0 1.1E-49 2.4E-54 498.1 38.1 402 512-966 14-437 (954)
17 PLN02414 glycine dehydrogenase 100.0 3.8E-47 8.2E-52 472.6 35.7 403 514-967 41-465 (993)
18 KOG2040 Glycine dehydrogenase 100.0 1.9E-41 4.2E-46 381.8 24.5 397 516-966 60-478 (1001)
19 COG1003 GcvP Glycine cleavage 100.0 1.9E-39 4.1E-44 356.5 32.0 389 118-529 19-443 (496)
20 PRK00451 glycine dehydrogenase 100.0 1.3E-37 2.8E-42 369.4 40.6 413 514-969 6-446 (447)
21 cd00613 GDC-P Glycine cleavage 100.0 9.2E-36 2E-40 348.0 37.9 375 150-527 1-398 (398)
22 cd00613 GDC-P Glycine cleavage 100.0 1.4E-33 3.1E-38 329.5 35.6 375 570-965 1-398 (398)
23 COG0520 csdA Selenocysteine ly 100.0 1.9E-32 4E-37 317.4 35.8 358 152-529 7-401 (405)
24 PRK09295 bifunctional cysteine 100.0 1.4E-26 3E-31 271.6 34.6 343 166-528 25-399 (406)
25 KOG1383 Glutamate decarboxylas 100.0 1.3E-26 2.8E-31 258.1 30.8 410 559-1011 54-485 (491)
26 PRK13520 L-tyrosine decarboxyl 100.0 1.4E-26 3E-31 267.9 32.5 358 567-969 1-369 (371)
27 COG0520 csdA Selenocysteine ly 100.0 2.5E-26 5.5E-31 266.3 33.0 314 628-970 62-404 (405)
28 PF00266 Aminotran_5: Aminotra 100.0 1.6E-26 3.5E-31 267.8 27.9 326 179-523 10-371 (371)
29 PLN03032 serine decarboxylase; 99.9 1.7E-25 3.7E-30 256.6 33.5 296 629-968 63-373 (374)
30 TIGR03392 FeS_syn_CsdA cystein 99.9 2.4E-25 5.1E-30 260.6 34.8 356 152-529 5-391 (398)
31 PRK10874 cysteine sulfinate de 99.9 3.4E-25 7.4E-30 259.5 35.2 360 150-529 6-394 (401)
32 PLN02855 Bifunctional selenocy 99.9 2.2E-25 4.7E-30 263.0 33.5 310 206-529 71-414 (424)
33 TIGR01788 Glu-decarb-GAD gluta 99.9 1.4E-24 3.1E-29 254.0 37.2 380 560-972 16-430 (431)
34 PRK02769 histidine decarboxyla 99.9 5E-25 1.1E-29 254.5 32.5 300 629-973 62-374 (380)
35 COG1104 NifS Cysteine sulfinat 99.9 3.7E-25 8E-30 247.8 29.2 287 208-529 41-373 (386)
36 PLN02263 serine decarboxylase 99.9 5.9E-25 1.3E-29 255.4 31.6 300 629-972 130-444 (470)
37 COG1104 NifS Cysteine sulfinat 99.9 1.1E-24 2.4E-29 244.0 29.6 310 630-975 42-381 (386)
38 TIGR01979 sufS cysteine desulf 99.9 9.3E-24 2E-28 247.4 35.2 306 208-528 59-396 (403)
39 TIGR01814 kynureninase kynuren 99.9 4.4E-24 9.5E-29 250.5 30.2 293 222-528 80-402 (406)
40 PLN02651 cysteine desulfurase 99.9 1E-23 2.2E-28 243.9 31.9 283 207-521 39-364 (364)
41 TIGR01976 am_tr_V_VC1184 cyste 99.9 1.7E-23 3.6E-28 244.7 33.6 298 206-527 55-397 (397)
42 TIGR03812 tyr_de_CO2_Arch tyro 99.9 2.4E-23 5.1E-28 241.3 33.8 361 569-968 1-373 (373)
43 TIGR03402 FeS_nifS cysteine de 99.9 3.2E-23 6.9E-28 241.0 33.7 292 206-529 37-368 (379)
44 cd06453 SufS_like Cysteine des 99.9 4.4E-23 9.6E-28 239.1 34.1 306 206-527 38-373 (373)
45 PLN02590 probable tyrosine dec 99.9 4.1E-23 8.9E-28 245.9 32.5 383 565-972 105-533 (539)
46 COG0076 GadB Glutamate decarbo 99.9 1.8E-23 3.9E-28 245.3 27.7 333 565-938 35-404 (460)
47 PRK13520 L-tyrosine decarboxyl 99.9 4.3E-22 9.4E-27 230.4 34.6 346 147-528 1-366 (371)
48 TIGR01977 am_tr_V_EF2568 cyste 99.9 3.7E-22 7.9E-27 231.6 34.0 301 207-528 40-374 (376)
49 PLN02880 tyrosine decarboxylas 99.9 3.3E-22 7.2E-27 238.2 31.8 385 565-973 57-486 (490)
50 PRK09295 bifunctional cysteine 99.9 1.5E-21 3.4E-26 229.0 32.7 311 630-970 65-403 (406)
51 PLN02724 Molybdenum cofactor s 99.9 1.2E-21 2.6E-26 247.0 33.4 343 164-529 34-484 (805)
52 cd06450 DOPA_deC_like DOPA dec 99.9 2.3E-22 5E-27 230.4 24.4 294 625-967 31-344 (345)
53 TIGR01979 sufS cysteine desulf 99.9 3.1E-21 6.7E-26 226.1 34.4 312 631-971 61-401 (403)
54 PF00282 Pyridoxal_deC: Pyrido 99.9 2.6E-22 5.7E-27 231.5 24.1 315 560-889 11-354 (373)
55 TIGR03392 FeS_syn_CsdA cystein 99.9 2.3E-21 5.1E-26 226.9 32.5 311 630-971 58-395 (398)
56 PRK10874 cysteine sulfinate de 99.9 3.6E-21 7.7E-26 225.6 33.3 312 629-971 60-398 (401)
57 PLN02855 Bifunctional selenocy 99.9 4.7E-21 1E-25 226.2 33.5 315 632-975 76-422 (424)
58 TIGR02006 IscS cysteine desulf 99.9 6.1E-21 1.3E-25 223.7 34.1 288 210-529 46-373 (402)
59 cd06453 SufS_like Cysteine des 99.9 4.3E-21 9.4E-26 222.4 32.5 310 630-965 41-373 (373)
60 TIGR03403 nifS_epsilon cystein 99.9 5.5E-21 1.2E-25 222.5 32.8 289 209-529 40-371 (382)
61 cd06451 AGAT_like Alanine-glyo 99.9 3E-21 6.5E-26 222.3 29.7 312 630-969 30-355 (356)
62 PTZ00094 serine hydroxymethylt 99.9 4E-21 8.7E-26 228.2 31.5 343 632-1025 79-451 (452)
63 TIGR01976 am_tr_V_VC1184 cyste 99.9 3.7E-21 7.9E-26 225.0 30.8 310 628-965 56-397 (397)
64 PRK02948 cysteine desulfurase; 99.9 9E-21 2E-25 220.6 32.2 292 205-529 37-370 (381)
65 TIGR03402 FeS_nifS cysteine de 99.9 1.4E-20 3E-25 218.9 33.2 309 630-974 40-375 (379)
66 PF00266 Aminotran_5: Aminotra 99.9 2.6E-21 5.6E-26 224.4 26.9 302 630-961 41-371 (371)
67 TIGR03799 NOD_PanD_pyr putativ 99.9 2.6E-20 5.6E-25 222.4 32.5 383 560-964 61-518 (522)
68 TIGR03812 tyr_de_CO2_Arch tyro 99.9 8.3E-20 1.8E-24 211.7 35.2 342 149-528 1-371 (373)
69 TIGR02006 IscS cysteine desulf 99.9 5E-20 1.1E-24 216.0 32.5 308 632-974 47-380 (402)
70 PRK02948 cysteine desulfurase; 99.9 6.6E-20 1.4E-24 213.4 33.2 306 631-973 42-376 (381)
71 PLN02651 cysteine desulfurase 99.9 2.9E-20 6.3E-25 215.1 29.5 295 630-959 41-364 (364)
72 TIGR03403 nifS_epsilon cystein 99.9 1.5E-19 3.3E-24 210.5 34.9 308 634-975 44-379 (382)
73 TIGR01977 am_tr_V_EF2568 cyste 99.9 9E-20 1.9E-24 211.6 31.9 305 631-967 43-375 (376)
74 COG4992 ArgD Ornithine/acetylo 99.9 3.8E-20 8.3E-25 207.1 27.1 317 590-973 52-400 (404)
75 PLN02409 serine--glyoxylate am 99.9 8.9E-20 1.9E-24 213.7 29.8 318 177-529 17-368 (401)
76 PRK03080 phosphoserine aminotr 99.9 8.5E-20 1.8E-24 212.2 29.0 296 210-529 47-369 (378)
77 PRK02769 histidine decarboxyla 99.9 1.6E-19 3.5E-24 208.7 31.1 281 207-530 61-369 (380)
78 TIGR01814 kynureninase kynuren 99.9 1.3E-19 2.9E-24 212.7 30.7 295 643-969 80-405 (406)
79 PLN02271 serine hydroxymethylt 99.9 1.3E-19 2.7E-24 211.8 30.0 313 631-971 193-540 (586)
80 cd06451 AGAT_like Alanine-glyo 99.9 1.4E-19 3.1E-24 208.4 30.2 295 208-529 29-353 (356)
81 COG0075 Serine-pyruvate aminot 99.9 2.2E-19 4.8E-24 203.1 29.6 320 177-529 13-359 (383)
82 PRK13580 serine hydroxymethylt 99.9 2.3E-19 5E-24 209.4 29.4 307 630-972 93-446 (493)
83 PLN02409 serine--glyoxylate am 99.8 3E-19 6.5E-24 209.2 30.1 318 629-971 39-372 (401)
84 PRK09331 Sep-tRNA:Cys-tRNA syn 99.8 5.3E-19 1.1E-23 206.3 31.1 305 633-971 64-381 (387)
85 TIGR02326 transamin_PhnW 2-ami 99.8 6.5E-19 1.4E-23 203.7 31.0 315 630-969 33-360 (363)
86 PRK14012 cysteine desulfurase; 99.8 6.4E-19 1.4E-23 206.8 31.3 290 210-529 48-375 (404)
87 TIGR02539 SepCysS Sep-tRNA:Cys 99.8 5.6E-19 1.2E-23 204.8 30.3 305 632-971 51-368 (370)
88 PRK14012 cysteine desulfurase; 99.8 8.7E-19 1.9E-23 205.7 32.0 310 632-974 49-382 (404)
89 TIGR01788 Glu-decarb-GAD gluta 99.8 1.3E-18 2.9E-23 203.8 33.3 346 140-529 16-425 (431)
90 COG0156 BioF 7-keto-8-aminopel 99.8 1.6E-19 3.4E-24 206.2 23.3 315 165-529 44-386 (388)
91 TIGR03301 PhnW-AepZ 2-aminoeth 99.8 1.1E-18 2.3E-23 200.5 29.4 312 631-968 30-354 (355)
92 PRK13479 2-aminoethylphosphona 99.8 2.1E-18 4.6E-23 199.7 31.7 311 632-971 37-363 (368)
93 COG0112 GlyA Glycine/serine hy 99.8 1E-18 2.3E-23 192.7 25.8 294 632-968 72-387 (413)
94 TIGR02326 transamin_PhnW 2-ami 99.8 1.8E-18 3.8E-23 200.1 29.1 293 209-529 33-358 (363)
95 TIGR03531 selenium_SpcS O-phos 99.8 2.6E-18 5.7E-23 200.5 30.6 364 560-968 29-443 (444)
96 TIGR01366 serC_3 phosphoserine 99.8 1.7E-18 3.7E-23 199.8 28.4 323 177-529 11-356 (361)
97 TIGR03235 DNA_S_dndA cysteine 99.8 3.1E-18 6.8E-23 197.2 30.5 263 206-500 37-319 (353)
98 PLN03032 serine decarboxylase; 99.8 3.1E-18 6.6E-23 196.9 29.6 279 207-529 62-372 (374)
99 PRK13479 2-aminoethylphosphona 99.8 7.6E-18 1.7E-22 195.1 31.5 319 171-529 9-359 (368)
100 PLN03226 serine hydroxymethylt 99.8 1.1E-17 2.4E-22 198.6 33.0 313 633-977 81-425 (475)
101 TIGR03811 tyr_de_CO2_Ent tyros 99.8 6.2E-18 1.4E-22 203.5 29.9 343 569-931 61-523 (608)
102 TIGR03301 PhnW-AepZ 2-aminoeth 99.8 1.7E-17 3.8E-22 190.5 31.6 317 177-528 7-352 (355)
103 PTZ00094 serine hydroxymethylt 99.8 2.9E-18 6.4E-23 203.8 25.9 285 208-529 76-404 (452)
104 TIGR01822 2am3keto_CoA 2-amino 99.8 5.9E-18 1.3E-22 197.7 28.1 280 206-529 78-385 (393)
105 cd06452 SepCysS Sep-tRNA:Cys-t 99.8 9.6E-18 2.1E-22 193.9 28.8 303 634-969 46-360 (361)
106 COG0075 Serine-pyruvate aminot 99.8 1.8E-17 3.9E-22 187.7 29.7 313 630-972 36-364 (383)
107 cd00611 PSAT_like Phosphoserin 99.8 5.2E-18 1.1E-22 195.6 23.8 314 177-529 7-352 (355)
108 cd00378 SHMT Serine-glycine hy 99.8 1.4E-17 3.1E-22 195.1 27.8 292 637-971 70-385 (402)
109 PRK09331 Sep-tRNA:Cys-tRNA syn 99.8 4.4E-17 9.6E-22 190.1 31.1 283 208-529 60-377 (387)
110 KOG1549 Cysteine desulfurase N 99.8 1.3E-17 2.7E-22 187.9 25.1 320 170-529 46-414 (428)
111 TIGR01364 serC_1 phosphoserine 99.8 2.3E-17 4.9E-22 189.4 27.7 281 211-528 37-343 (349)
112 TIGR02539 SepCysS Sep-tRNA:Cys 99.8 8.8E-17 1.9E-21 186.6 31.8 284 205-528 45-363 (370)
113 PLN02955 8-amino-7-oxononanoat 99.8 2.1E-17 4.5E-22 192.9 24.9 310 165-529 107-457 (476)
114 PRK05355 3-phosphoserine/phosp 99.8 2.6E-17 5.6E-22 189.8 25.3 281 210-529 47-354 (360)
115 KOG1549 Cysteine desulfurase N 99.8 2.7E-17 5.8E-22 185.3 24.3 205 592-813 47-257 (428)
116 cd00616 AHBA_syn 3-amino-5-hyd 99.8 3E-17 6.5E-22 188.6 25.3 301 633-966 19-352 (352)
117 PRK05937 8-amino-7-oxononanoat 99.8 4.1E-17 8.8E-22 189.3 26.5 314 167-529 11-346 (370)
118 PRK13034 serine hydroxymethylt 99.8 7.3E-17 1.6E-21 189.7 28.7 296 633-970 71-391 (416)
119 COG3844 Kynureninase [Amino ac 99.8 3.9E-17 8.4E-22 174.9 23.5 301 214-529 79-398 (407)
120 TIGR01822 2am3keto_CoA 2-amino 99.8 7.1E-17 1.5E-21 188.6 27.5 294 629-971 80-389 (393)
121 PRK07179 hypothetical protein; 99.8 8.6E-17 1.9E-21 189.0 27.8 286 633-971 100-398 (407)
122 COG0160 GabT 4-aminobutyrate a 99.8 2.5E-16 5.5E-21 181.7 30.6 331 591-972 67-446 (447)
123 cd06454 KBL_like KBL_like; thi 99.8 5.2E-17 1.1E-21 186.3 25.0 287 633-968 47-348 (349)
124 PRK00011 glyA serine hydroxyme 99.8 1.1E-16 2.3E-21 188.7 28.0 291 637-970 76-388 (416)
125 PRK03080 phosphoserine aminotr 99.8 5.9E-17 1.3E-21 188.4 25.3 308 631-973 47-375 (378)
126 TIGR01437 selA_rel uncharacter 99.8 1.3E-16 2.8E-21 184.5 27.9 293 632-968 45-362 (363)
127 PF00464 SHMT: Serine hydroxym 99.8 1E-16 2.2E-21 183.6 25.9 278 632-952 66-382 (399)
128 cd00609 AAT_like Aspartate ami 99.8 9.4E-17 2E-21 183.2 25.8 295 628-966 36-349 (350)
129 PRK05937 8-amino-7-oxononanoat 99.8 1.9E-16 4.2E-21 183.7 28.6 288 627-972 51-351 (370)
130 PRK04073 rocD ornithine--oxo-a 99.8 3E-16 6.5E-21 183.7 30.1 282 634-969 84-395 (396)
131 TIGR01821 5aminolev_synth 5-am 99.8 1.3E-16 2.9E-21 187.1 26.7 292 632-971 90-396 (402)
132 PRK07179 hypothetical protein; 99.8 1.1E-16 2.4E-21 188.0 25.8 269 212-529 100-394 (407)
133 cd06450 DOPA_deC_like DOPA dec 99.8 1.1E-16 2.3E-21 183.6 25.0 264 205-529 32-344 (345)
134 TIGR03235 DNA_S_dndA cysteine 99.8 2.6E-16 5.7E-21 181.3 28.3 271 631-935 41-319 (353)
135 COG0436 Aspartate/tyrosine/aro 99.7 1.9E-16 4.1E-21 184.3 26.8 332 590-971 29-391 (393)
136 TIGR03246 arg_catab_astC succi 99.7 6E-16 1.3E-20 181.2 31.0 287 634-971 79-395 (397)
137 cd06502 TA_like Low-specificit 99.7 4.6E-17 9.9E-22 186.0 21.1 287 634-967 34-337 (338)
138 COG0161 BioA Adenosylmethionin 99.7 1.4E-16 3E-21 182.6 24.6 342 593-974 57-446 (449)
139 PLN02721 threonine aldolase 99.7 2.2E-16 4.9E-21 181.4 26.1 292 634-970 42-351 (353)
140 TIGR01821 5aminolev_synth 5-am 99.7 2E-16 4.3E-21 185.7 26.0 311 167-529 52-392 (402)
141 PLN03227 serine palmitoyltrans 99.7 2.8E-16 6.2E-21 183.4 27.1 309 164-529 2-378 (392)
142 PF01276 OKR_DC_1: Orn/Lys/Arg 99.7 4.5E-17 9.8E-22 187.2 19.8 267 211-518 66-416 (417)
143 PRK05964 adenosylmethionine--8 99.7 4.4E-16 9.5E-21 183.8 28.1 302 634-971 87-422 (423)
144 PRK00854 rocD ornithine--oxo-a 99.7 1E-15 2.2E-20 179.6 30.8 286 633-969 84-399 (401)
145 PLN02724 Molybdenum cofactor s 99.7 2.7E-16 5.8E-21 198.7 27.6 317 628-969 74-486 (805)
146 KOG1359 Glycine C-acetyltransf 99.7 4.5E-17 9.8E-22 171.6 16.8 310 164-529 71-408 (417)
147 cd06454 KBL_like KBL_like; thi 99.7 6.3E-16 1.4E-20 177.3 27.6 313 167-529 3-347 (349)
148 PRK13392 5-aminolevulinate syn 99.7 4.3E-16 9.3E-21 183.3 26.8 290 634-971 93-397 (410)
149 PRK08114 cystathionine beta-ly 99.7 9.2E-16 2E-20 177.5 28.6 211 215-468 66-284 (395)
150 PRK13393 5-aminolevulinate syn 99.7 5.8E-16 1.3E-20 182.0 27.4 292 633-972 91-397 (406)
151 PRK09064 5-aminolevulinate syn 99.7 5.2E-16 1.1E-20 182.4 26.8 292 632-971 91-397 (407)
152 cd06452 SepCysS Sep-tRNA:Cys-t 99.7 2.9E-15 6.3E-20 173.3 32.1 279 211-528 44-357 (361)
153 PRK15029 arginine decarboxylas 99.7 2.8E-16 6E-21 192.6 24.8 278 211-528 205-599 (755)
154 PRK15029 arginine decarboxylas 99.7 4.9E-16 1.1E-20 190.5 26.9 305 634-971 207-604 (755)
155 PLN02483 serine palmitoyltrans 99.7 1.6E-15 3.4E-20 181.7 30.2 314 166-529 106-462 (489)
156 PRK06939 2-amino-3-ketobutyrat 99.7 8.8E-16 1.9E-20 179.4 27.4 296 627-971 82-393 (397)
157 PRK13392 5-aminolevulinate syn 99.7 6.3E-16 1.4E-20 181.9 26.0 276 208-529 88-393 (410)
158 PRK06943 adenosylmethionine--8 99.7 3.2E-15 7E-20 177.2 31.7 305 634-972 99-447 (453)
159 PRK05958 8-amino-7-oxononanoat 99.7 9.1E-16 2E-20 178.4 26.3 290 629-968 81-384 (385)
160 TIGR01437 selA_rel uncharacter 99.7 1.3E-15 2.8E-20 176.2 27.2 297 180-529 25-361 (363)
161 cd00609 AAT_like Aspartate ami 99.7 2.9E-15 6.2E-20 171.0 29.8 305 171-528 3-349 (350)
162 PRK07678 aminotransferase; Val 99.7 2.5E-15 5.5E-20 178.2 29.9 312 634-972 91-450 (451)
163 PRK13393 5-aminolevulinate syn 99.7 9.1E-16 2E-20 180.3 26.0 311 167-529 52-392 (406)
164 PF01276 OKR_DC_1: Orn/Lys/Arg 99.7 4.8E-17 1.1E-21 187.0 14.8 290 633-956 67-416 (417)
165 TIGR01825 gly_Cac_T_rel pyrido 99.7 1.1E-15 2.4E-20 178.0 26.3 294 628-971 74-381 (385)
166 COG0076 GadB Glutamate decarbo 99.7 1.6E-15 3.6E-20 178.3 27.7 327 140-502 32-403 (460)
167 PRK09064 5-aminolevulinate syn 99.7 7.8E-16 1.7E-20 180.9 24.7 275 208-529 88-393 (407)
168 TIGR00858 bioF 8-amino-7-oxono 99.7 1.5E-15 3.2E-20 174.8 26.1 285 632-966 61-360 (360)
169 PRK13034 serine hydroxymethylt 99.7 2.1E-15 4.6E-20 177.4 27.7 277 211-529 70-388 (416)
170 PLN02624 ornithine-delta-amino 99.7 4.1E-15 8.8E-20 177.6 30.5 293 634-971 119-444 (474)
171 PLN02483 serine palmitoyltrans 99.7 2E-15 4.4E-20 180.7 27.9 294 632-972 146-467 (489)
172 TIGR03372 putres_am_tran putre 99.7 3.1E-15 6.7E-20 176.3 28.7 287 634-968 119-441 (442)
173 PRK07482 hypothetical protein; 99.7 5.8E-15 1.3E-19 175.5 31.3 311 633-972 95-455 (461)
174 PRK11522 putrescine--2-oxoglut 99.7 3.1E-15 6.8E-20 177.4 28.6 294 634-975 126-455 (459)
175 PRK06767 methionine gamma-lyas 99.7 2.3E-15 4.9E-20 175.6 26.8 273 214-528 64-384 (386)
176 TIGR01141 hisC histidinol-phos 99.7 8.5E-16 1.8E-20 176.4 22.8 280 635-966 57-346 (346)
177 PRK06173 adenosylmethionine--8 99.7 5.6E-15 1.2E-19 174.0 30.1 300 634-973 89-427 (429)
178 PRK08064 cystathionine beta-ly 99.7 2.3E-15 4.9E-20 175.7 26.5 274 212-529 55-382 (390)
179 PRK05764 aspartate aminotransf 99.7 5.5E-15 1.2E-19 172.8 29.4 306 628-971 68-391 (393)
180 PRK09028 cystathionine beta-ly 99.7 9.2E-15 2E-19 169.7 30.7 210 215-467 65-280 (394)
181 PRK06108 aspartate aminotransf 99.7 3.8E-15 8.2E-20 173.4 27.6 300 627-969 60-380 (382)
182 PRK03244 argD acetylornithine 99.7 6E-15 1.3E-19 172.9 29.4 279 635-973 88-396 (398)
183 PRK03715 argD acetylornithine 99.7 8.7E-15 1.9E-19 171.0 30.1 289 633-972 79-394 (395)
184 PRK01278 argD acetylornithine 99.7 8.1E-15 1.8E-19 171.3 29.9 288 634-971 75-388 (389)
185 PRK06939 2-amino-3-ketobutyrat 99.7 4.3E-15 9.3E-20 173.6 27.5 315 166-528 43-388 (397)
186 cd00614 CGS_like CGS_like: Cys 99.7 5.8E-15 1.3E-19 171.2 28.2 214 212-468 41-261 (369)
187 PRK05355 3-phosphoserine/phosp 99.7 9.2E-16 2E-20 177.0 21.3 298 631-970 47-357 (360)
188 PRK06225 aspartate aminotransf 99.7 5.4E-15 1.2E-19 172.2 27.9 296 635-974 69-379 (380)
189 PRK05968 hypothetical protein; 99.7 2.5E-15 5.4E-20 175.3 24.8 274 213-529 65-386 (389)
190 cd00616 AHBA_syn 3-amino-5-hyd 99.7 3.9E-15 8.4E-20 171.1 25.8 279 212-528 19-352 (352)
191 PRK09221 beta alanine--pyruvat 99.7 1.5E-14 3.2E-19 171.3 31.3 306 634-972 94-444 (445)
192 TIGR01324 cysta_beta_ly_B cyst 99.7 5.2E-15 1.1E-19 171.5 26.8 160 214-382 53-218 (377)
193 PLN02822 serine palmitoyltrans 99.7 4.9E-15 1.1E-19 177.1 27.0 315 166-529 110-473 (481)
194 PRK05630 adenosylmethionine--8 99.7 1.1E-14 2.5E-19 171.2 29.5 295 634-970 85-419 (422)
195 PRK13360 omega amino acid--pyr 99.7 9.9E-15 2.1E-19 172.7 29.0 304 634-971 91-440 (442)
196 PRK12381 bifunctional succinyl 99.7 1.5E-14 3.2E-19 170.0 30.2 289 634-973 83-401 (406)
197 PRK05965 hypothetical protein; 99.7 2.6E-14 5.6E-19 169.9 32.4 310 634-972 92-448 (459)
198 TIGR01329 cysta_beta_ly_E cyst 99.7 8.1E-15 1.8E-19 170.3 27.2 272 213-528 49-374 (378)
199 PLN02760 4-aminobutyrate:pyruv 99.7 2.3E-14 4.9E-19 171.7 31.6 309 633-973 134-493 (504)
200 PRK13578 ornithine decarboxyla 99.7 1.8E-15 3.8E-20 183.8 22.1 282 211-528 174-560 (720)
201 PRK06541 hypothetical protein; 99.7 4E-14 8.6E-19 168.3 32.8 310 634-973 97-457 (460)
202 TIGR01885 Orn_aminotrans ornit 99.7 3.3E-14 7.2E-19 166.8 31.6 290 634-969 81-400 (401)
203 PLN03227 serine palmitoyltrans 99.7 1.2E-14 2.6E-19 169.7 27.8 298 633-972 44-383 (392)
204 PLN02263 serine decarboxylase 99.7 4.2E-14 9.1E-19 165.2 31.9 332 151-530 76-440 (470)
205 PRK07582 cystathionine gamma-l 99.7 1.4E-14 2.9E-19 167.8 27.8 271 214-528 54-364 (366)
206 PRK09264 diaminobutyrate--2-ox 99.7 3.5E-14 7.7E-19 167.6 31.9 296 634-977 84-422 (425)
207 cd00615 Orn_deC_like Ornithine 99.7 5.5E-16 1.2E-20 174.2 15.7 166 633-814 60-236 (294)
208 KOG2862 Alanine-glyoxylate ami 99.7 1.9E-14 4.1E-19 153.6 26.2 324 170-529 20-378 (385)
209 PRK08117 4-aminobutyrate amino 99.7 3E-14 6.5E-19 168.8 31.1 297 634-972 88-430 (433)
210 PRK05957 aspartate aminotransf 99.7 1.4E-14 2.9E-19 169.4 27.9 303 627-971 64-385 (389)
211 PRK06916 adenosylmethionine--8 99.7 2.6E-14 5.6E-19 170.0 30.6 309 634-972 101-456 (460)
212 PRK08742 adenosylmethionine--8 99.7 2.5E-14 5.3E-19 170.2 30.3 306 634-972 109-468 (472)
213 PRK04612 argD acetylornithine 99.7 3.3E-14 7.2E-19 166.6 30.9 291 634-973 84-405 (408)
214 PRK07030 adenosylmethionine--8 99.7 3E-14 6.6E-19 169.4 31.0 308 634-972 92-447 (466)
215 PRK07986 adenosylmethionine--8 99.7 2E-14 4.3E-19 169.2 29.0 297 634-970 88-422 (428)
216 PLN02955 8-amino-7-oxononanoat 99.7 1E-14 2.3E-19 170.4 26.2 297 629-972 144-462 (476)
217 PRK06105 aminotransferase; Pro 99.7 3.5E-14 7.7E-19 168.8 31.2 310 634-974 94-452 (460)
218 TIGR01328 met_gam_lyase methio 99.7 1.8E-14 4E-19 168.0 28.3 214 214-468 62-281 (391)
219 TIGR01366 serC_3 phosphoserine 99.7 6.3E-15 1.4E-19 170.3 23.9 301 631-971 40-360 (361)
220 PLN02822 serine palmitoyltrans 99.7 2.2E-14 4.7E-19 171.6 29.3 298 629-972 151-478 (481)
221 PRK07483 hypothetical protein; 99.7 6.1E-14 1.3E-18 166.0 32.7 310 634-973 75-439 (443)
222 PRK04311 selenocysteine syntha 99.7 2.4E-14 5.2E-19 169.1 29.2 305 180-528 98-459 (464)
223 PLN02880 tyrosine decarboxylas 99.7 1.9E-14 4.1E-19 171.9 28.3 357 145-529 57-480 (490)
224 PRK06917 hypothetical protein; 99.7 5.6E-14 1.2E-18 166.5 32.1 343 592-973 43-439 (447)
225 TIGR00474 selA seryl-tRNA(sec) 99.7 3.1E-14 6.8E-19 167.7 29.6 303 180-527 93-453 (454)
226 PRK11658 UDP-4-amino-4-deoxy-L 99.7 1.7E-14 3.7E-19 167.9 27.2 307 634-969 35-377 (379)
227 TIGR01141 hisC histidinol-phos 99.7 2.8E-14 6.2E-19 163.8 28.7 299 172-528 25-346 (346)
228 TIGR03576 pyridox_MJ0158 pyrid 99.7 2.7E-14 5.9E-19 163.9 28.2 310 151-530 8-344 (346)
229 PLN02590 probable tyrosine dec 99.7 6.2E-14 1.3E-18 167.7 32.1 356 145-529 105-528 (539)
230 PRK05769 4-aminobutyrate amino 99.7 5.8E-14 1.3E-18 166.2 31.4 292 634-971 99-439 (441)
231 TIGR00858 bioF 8-amino-7-oxono 99.7 2.5E-14 5.4E-19 164.6 27.5 274 207-528 57-360 (360)
232 PRK07481 hypothetical protein; 99.7 4.7E-14 1E-18 167.4 30.5 308 634-972 88-446 (449)
233 PRK08133 O-succinylhomoserine 99.7 3.1E-14 6.8E-19 166.1 28.5 213 213-468 63-281 (390)
234 PRK13578 ornithine decarboxyla 99.7 9.3E-15 2E-19 177.6 24.8 308 634-971 176-565 (720)
235 PRK08134 O-acetylhomoserine am 99.7 1.2E-14 2.6E-19 171.1 25.2 143 212-360 65-213 (433)
236 PRK08114 cystathionine beta-ly 99.7 1.4E-14 2.9E-19 167.9 24.6 216 635-896 65-290 (395)
237 PRK08360 4-aminobutyrate amino 99.7 7.4E-14 1.6E-18 165.3 31.5 298 634-974 86-429 (443)
238 PRK12403 putative aminotransfe 99.6 8.3E-14 1.8E-18 165.7 31.9 307 633-973 99-454 (460)
239 TIGR02407 ectoine_ectB diamino 99.6 5.3E-14 1.1E-18 165.4 29.9 290 634-970 80-411 (412)
240 TIGR00508 bioA adenosylmethion 99.6 4.2E-14 9.1E-19 166.8 29.1 299 634-971 90-426 (427)
241 PLN00175 aminotransferase fami 99.6 3.2E-14 6.9E-19 167.5 28.1 330 590-969 55-411 (413)
242 cd06502 TA_like Low-specificit 99.6 8.6E-15 1.9E-19 167.2 22.6 272 213-528 34-336 (338)
243 PRK07324 transaminase; Validat 99.6 4.4E-14 9.5E-19 164.2 28.8 291 636-970 66-369 (373)
244 COG2008 GLY1 Threonine aldolas 99.6 6.7E-15 1.4E-19 162.4 20.5 290 632-969 35-341 (342)
245 PRK08593 4-aminobutyrate amino 99.6 8.4E-14 1.8E-18 165.1 31.4 298 634-974 87-432 (445)
246 PRK08064 cystathionine beta-ly 99.6 2.5E-14 5.4E-19 166.9 26.4 280 634-968 56-383 (390)
247 PRK05093 argD bifunctional N-s 99.6 7.7E-14 1.7E-18 163.9 30.6 288 635-971 85-400 (403)
248 PRK13580 serine hydroxymethylt 99.6 1.6E-14 3.6E-19 168.9 24.6 275 216-529 100-441 (493)
249 PRK09082 methionine aminotrans 99.6 1.9E-14 4.1E-19 168.0 25.1 344 573-967 19-385 (386)
250 TIGR03588 PseC UDP-4-keto-6-de 99.6 3.6E-14 7.8E-19 165.3 27.4 305 635-968 32-379 (380)
251 PRK00950 histidinol-phosphate 99.6 1.6E-14 3.4E-19 167.0 24.1 280 635-969 72-360 (361)
252 PRK07682 hypothetical protein; 99.6 1.5E-14 3.3E-19 168.3 24.1 300 628-971 57-376 (378)
253 PRK15407 lipopolysaccharide bi 99.6 1.2E-13 2.6E-18 163.2 31.8 372 568-970 2-435 (438)
254 cd00610 OAT_like Acetyl ornith 99.6 6.9E-14 1.5E-18 164.5 29.6 294 632-968 79-412 (413)
255 PRK06062 hypothetical protein; 99.6 8.4E-14 1.8E-18 165.2 30.4 298 634-974 97-448 (451)
256 COG0156 BioF 7-keto-8-aminopel 99.6 2.5E-14 5.4E-19 163.8 24.7 288 629-968 81-387 (388)
257 PRK08861 cystathionine gamma-s 99.6 8.3E-15 1.8E-19 170.1 21.1 279 634-998 55-345 (388)
258 TIGR01325 O_suc_HS_sulf O-succ 99.6 3.4E-14 7.3E-19 165.4 26.2 213 213-468 56-274 (380)
259 cd00378 SHMT Serine-glycine hy 99.6 4.4E-14 9.5E-19 165.7 27.4 277 211-529 64-381 (402)
260 PRK02731 histidinol-phosphate 99.6 2.5E-14 5.5E-19 165.7 25.0 285 635-970 70-365 (367)
261 TIGR01364 serC_1 phosphoserine 99.6 1.6E-14 3.5E-19 165.9 23.1 298 630-970 35-347 (349)
262 PRK14807 histidinol-phosphate 99.6 4.4E-14 9.5E-19 162.8 26.7 283 635-969 62-350 (351)
263 TIGR03799 NOD_PanD_pyr putativ 99.6 1.2E-13 2.7E-18 165.4 31.3 295 205-526 123-518 (522)
264 PF01053 Cys_Met_Meta_PP: Cys/ 99.6 5.3E-14 1.1E-18 162.7 27.2 212 214-468 58-278 (386)
265 PRK07681 aspartate aminotransf 99.6 6E-14 1.3E-18 164.5 28.2 296 628-967 69-384 (399)
266 PRK05967 cystathionine beta-ly 99.6 4.4E-14 9.6E-19 163.8 26.5 210 215-467 68-283 (395)
267 PRK04635 histidinol-phosphate 99.6 1.8E-14 3.8E-19 166.3 23.2 281 635-967 63-351 (354)
268 PRK04013 argD acetylornithine/ 99.6 5E-14 1.1E-18 162.3 26.8 266 634-971 68-360 (364)
269 PRK07495 4-aminobutyrate amino 99.6 1.4E-13 3E-18 162.2 31.2 297 634-973 85-423 (425)
270 PTZ00125 ornithine aminotransf 99.6 1.6E-13 3.5E-18 160.9 31.7 292 633-973 74-397 (400)
271 PRK06234 methionine gamma-lyas 99.6 3.9E-14 8.4E-19 165.9 26.3 274 214-528 67-396 (400)
272 PRK08248 O-acetylhomoserine am 99.6 2.4E-14 5.2E-19 168.6 24.5 141 215-361 68-214 (431)
273 PRK05387 histidinol-phosphate 99.6 3.9E-14 8.5E-19 163.2 25.9 282 636-970 64-352 (353)
274 PRK12389 glutamate-1-semialdeh 99.6 7.2E-14 1.6E-18 165.1 28.7 288 635-971 96-427 (428)
275 PRK07480 putative aminotransfe 99.6 1.3E-13 2.9E-18 163.6 30.9 308 633-973 95-450 (456)
276 PRK09028 cystathionine beta-ly 99.6 4.1E-14 8.9E-19 164.3 25.7 213 635-896 64-287 (394)
277 PRK13238 tnaA tryptophanase/L- 99.6 1.7E-13 3.7E-18 162.7 31.4 318 634-989 80-451 (460)
278 PRK06176 cystathionine gamma-s 99.6 5.1E-14 1.1E-18 163.6 26.5 212 213-468 52-270 (380)
279 TIGR00709 dat 2,4-diaminobutyr 99.6 1.9E-13 4.1E-18 162.1 31.7 297 634-972 84-436 (442)
280 PRK07504 O-succinylhomoserine 99.6 5.8E-14 1.3E-18 164.2 26.9 272 214-528 68-394 (398)
281 KOG1402 Ornithine aminotransfe 99.6 8.7E-14 1.9E-18 149.4 25.6 329 572-969 57-425 (427)
282 PRK06207 aspartate aminotransf 99.6 1.1E-13 2.3E-18 162.8 29.2 303 628-972 78-403 (405)
283 TIGR01329 cysta_beta_ly_E cyst 99.6 2.4E-14 5.1E-19 166.5 23.4 281 634-971 49-375 (378)
284 PRK05613 O-acetylhomoserine am 99.6 4.6E-14 1E-18 166.1 25.8 291 634-996 71-396 (437)
285 PRK05639 4-aminobutyrate amino 99.6 2.5E-13 5.4E-18 161.3 32.2 297 634-973 98-445 (457)
286 PRK07050 cystathionine beta-ly 99.6 3.5E-14 7.6E-19 165.8 24.5 272 214-528 68-390 (394)
287 TIGR03537 DapC succinyldiamino 99.6 6.9E-14 1.5E-18 161.1 26.5 297 628-967 36-349 (350)
288 PRK05958 8-amino-7-oxononanoat 99.6 1.9E-13 4.1E-18 159.0 30.4 277 205-529 78-383 (385)
289 PRK07309 aromatic amino acid a 99.6 1.1E-13 2.3E-18 162.0 28.5 305 628-971 67-388 (391)
290 cd00614 CGS_like CGS_like: Cys 99.6 5.1E-14 1.1E-18 163.4 25.4 210 634-889 42-257 (369)
291 PRK06058 4-aminobutyrate amino 99.6 1.4E-13 3.1E-18 163.3 29.6 296 633-971 100-442 (443)
292 TIGR01328 met_gam_lyase methio 99.6 5.4E-14 1.2E-18 164.1 25.4 219 634-896 61-287 (391)
293 PRK07810 O-succinylhomoserine 99.6 7E-14 1.5E-18 163.6 26.4 212 214-468 73-291 (403)
294 PLN02482 glutamate-1-semialdeh 99.6 6E-14 1.3E-18 166.7 26.1 291 634-971 141-473 (474)
295 TIGR01825 gly_Cac_T_rel pyrido 99.6 6.6E-14 1.4E-18 163.1 25.9 277 205-529 72-377 (385)
296 PRK06082 4-aminobutyrate amino 99.6 1.9E-13 4.1E-18 162.4 30.2 297 634-973 115-453 (459)
297 PRK06290 aspartate aminotransf 99.6 1.3E-13 2.8E-18 162.2 28.2 306 628-972 81-406 (410)
298 PRK15400 lysine decarboxylase 99.6 4.5E-14 9.8E-19 171.5 24.8 298 634-971 197-559 (714)
299 PRK03158 histidinol-phosphate 99.6 6.7E-14 1.5E-18 161.7 25.4 282 635-968 67-358 (359)
300 PRK05968 hypothetical protein; 99.6 4E-14 8.7E-19 165.2 23.6 282 634-971 65-386 (389)
301 PRK08361 aspartate aminotransf 99.6 6.7E-14 1.5E-18 163.7 25.6 300 628-970 70-389 (391)
302 PRK09105 putative aminotransfe 99.6 1.1E-13 2.3E-18 160.7 27.0 280 634-969 80-368 (370)
303 PLN02509 cystathionine beta-ly 99.6 7.4E-14 1.6E-18 165.0 25.8 212 213-468 135-353 (464)
304 PRK08861 cystathionine gamma-s 99.6 1.7E-13 3.7E-18 159.2 28.4 212 214-468 56-274 (388)
305 PRK00011 glyA serine hydroxyme 99.6 1.3E-13 2.7E-18 162.7 27.8 272 216-529 76-385 (416)
306 PRK06938 diaminobutyrate--2-ox 99.6 3.1E-13 6.7E-18 160.8 31.2 296 635-972 109-461 (464)
307 PRK07036 hypothetical protein; 99.6 4.2E-13 9.1E-18 159.8 32.3 308 634-973 97-454 (466)
308 PRK08134 O-acetylhomoserine am 99.6 3.6E-14 7.9E-19 167.1 23.0 223 634-889 66-313 (433)
309 PRK05994 O-acetylhomoserine am 99.6 1E-13 2.2E-18 163.5 26.8 295 635-999 66-389 (427)
310 PRK15399 lysine decarboxylase 99.6 6.7E-14 1.5E-18 170.0 25.7 272 211-528 195-554 (713)
311 PRK01688 histidinol-phosphate 99.6 4E-14 8.7E-19 163.2 22.8 281 635-966 60-351 (351)
312 PRK05942 aspartate aminotransf 99.6 1E-13 2.2E-18 162.4 26.2 296 627-969 72-387 (394)
313 PRK05613 O-acetylhomoserine am 99.6 1.7E-13 3.6E-18 161.5 27.9 145 213-363 71-221 (437)
314 PRK08248 O-acetylhomoserine am 99.6 5.9E-14 1.3E-18 165.4 24.0 293 634-998 66-389 (431)
315 KOG1360 5-aminolevulinate synt 99.6 2.1E-14 4.5E-19 157.0 18.4 313 168-528 179-519 (570)
316 COG0626 MetC Cystathionine bet 99.6 2.5E-13 5.4E-18 155.3 28.1 143 213-361 65-214 (396)
317 PRK07812 O-acetylhomoserine am 99.6 9.9E-14 2.2E-18 163.3 25.7 140 215-360 73-219 (436)
318 PRK15400 lysine decarboxylase 99.6 3.5E-14 7.5E-19 172.5 22.2 273 211-528 195-554 (714)
319 PLN03026 histidinol-phosphate 99.6 1.1E-13 2.3E-18 161.3 25.7 284 635-968 89-379 (380)
320 PRK07811 cystathionine gamma-s 99.6 4.2E-13 9.1E-18 156.6 30.5 273 213-528 63-387 (388)
321 PRK08249 cystathionine gamma-s 99.6 3.6E-13 7.8E-18 157.5 30.0 273 213-528 66-392 (398)
322 cd00611 PSAT_like Phosphoserin 99.6 3.8E-14 8.3E-19 163.6 21.6 293 631-968 43-353 (355)
323 PRK07550 hypothetical protein; 99.6 2.2E-13 4.8E-18 159.0 28.2 349 571-968 15-384 (386)
324 TIGR03531 selenium_SpcS O-phos 99.6 3.2E-13 6.9E-18 158.1 29.2 340 139-528 28-441 (444)
325 PLN00144 acetylornithine trans 99.6 3.8E-13 8.2E-18 156.7 29.8 285 634-971 59-380 (382)
326 PLN02242 methionine gamma-lyas 99.6 1.7E-13 3.7E-18 160.9 27.0 217 213-470 78-302 (418)
327 PRK09792 4-aminobutyrate trans 99.6 5.6E-13 1.2E-17 157.2 31.4 294 634-969 85-419 (421)
328 PRK07777 aminotransferase; Val 99.6 1.7E-13 3.6E-18 160.1 26.7 298 628-968 61-383 (387)
329 PRK06702 O-acetylhomoserine am 99.6 1.5E-13 3.3E-18 161.0 26.2 295 213-530 63-425 (432)
330 PRK07504 O-succinylhomoserine 99.6 1.1E-13 2.4E-18 162.0 25.1 216 634-896 67-292 (398)
331 PRK07503 methionine gamma-lyas 99.6 2.8E-13 6E-18 158.8 28.4 275 213-528 67-395 (403)
332 COG0079 HisC Histidinol-phosph 99.6 2.5E-13 5.5E-18 155.7 27.4 283 635-971 60-354 (356)
333 PRK07337 aminotransferase; Val 99.6 1.7E-13 3.7E-18 160.1 26.6 302 628-967 67-385 (388)
334 PRK12414 putative aminotransfe 99.6 9.5E-14 2.1E-18 162.0 24.3 297 627-967 65-383 (384)
335 PRK08574 cystathionine gamma-s 99.6 2.9E-13 6.4E-18 157.6 28.3 212 213-468 55-273 (385)
336 COG0001 HemL Glutamate-1-semia 99.6 4.4E-13 9.5E-18 152.3 28.6 291 633-973 94-430 (432)
337 TIGR01325 O_suc_HS_sulf O-succ 99.6 4.9E-14 1.1E-18 164.0 21.7 279 634-999 56-345 (380)
338 COG2873 MET17 O-acetylhomoseri 99.6 1.8E-13 3.9E-18 150.0 24.4 140 216-361 67-212 (426)
339 PRK08912 hypothetical protein; 99.6 2.5E-13 5.4E-18 158.6 27.5 300 628-969 63-384 (387)
340 PRK08960 hypothetical protein; 99.6 3.1E-13 6.7E-18 157.9 28.2 296 628-968 69-381 (387)
341 PRK08133 O-succinylhomoserine 99.6 3.3E-14 7.3E-19 165.9 19.9 281 634-998 63-352 (390)
342 PRK08776 cystathionine gamma-s 99.6 2.4E-13 5.1E-18 159.2 27.0 217 634-896 62-287 (405)
343 PRK07505 hypothetical protein; 99.6 2.5E-13 5.4E-18 159.5 27.2 289 632-970 91-398 (402)
344 KOG2862 Alanine-glyoxylate ami 99.6 3.8E-13 8.2E-18 143.8 25.6 312 631-971 49-382 (385)
345 PRK06767 methionine gamma-lyas 99.6 8.3E-14 1.8E-18 162.5 22.9 283 635-970 64-384 (386)
346 PRK07046 aminotransferase; Val 99.6 1.9E-13 4.2E-18 162.0 26.2 298 634-972 117-451 (453)
347 TIGR03540 DapC_direct LL-diami 99.6 5.6E-13 1.2E-17 155.4 29.6 294 628-965 67-380 (383)
348 PRK08247 cystathionine gamma-s 99.6 2.8E-13 6E-18 157.0 26.6 228 213-484 54-289 (366)
349 KOG2467 Glycine/serine hydroxy 99.6 2.6E-13 5.6E-18 147.5 24.3 397 581-1025 47-474 (477)
350 PRK02936 argD acetylornithine 99.6 8.1E-13 1.8E-17 153.8 30.4 276 632-968 71-376 (377)
351 PRK08249 cystathionine gamma-s 99.6 5.3E-14 1.2E-18 164.4 20.4 210 634-889 66-280 (398)
352 PRK04311 selenocysteine syntha 99.6 2.6E-13 5.7E-18 160.3 26.3 290 634-969 129-462 (464)
353 PRK07671 cystathionine beta-ly 99.6 5.8E-13 1.3E-17 154.7 28.9 212 213-468 52-270 (377)
354 PRK06777 4-aminobutyrate amino 99.6 7.5E-13 1.6E-17 156.1 29.9 288 635-969 86-419 (421)
355 TIGR00713 hemL glutamate-1-sem 99.6 2.8E-13 6.1E-18 160.1 26.2 289 635-971 91-422 (423)
356 PRK07812 O-acetylhomoserine am 99.6 1.9E-13 4.2E-18 160.9 24.5 295 634-999 71-394 (436)
357 TIGR01324 cysta_beta_ly_B cyst 99.6 1.1E-13 2.3E-18 160.6 22.1 216 635-896 53-276 (377)
358 PRK07269 cystathionine gamma-s 99.6 4.2E-13 9.1E-18 155.1 26.8 228 213-484 56-289 (364)
359 PRK15399 lysine decarboxylase 99.6 4.3E-13 9.3E-18 163.1 27.9 298 634-971 197-559 (713)
360 PRK07582 cystathionine gamma-l 99.6 2.1E-13 4.6E-18 157.9 24.2 275 634-966 53-364 (366)
361 COG3844 Kynureninase [Amino ac 99.6 4.8E-13 1E-17 143.9 24.8 306 632-972 76-403 (407)
362 PRK06931 diaminobutyrate--2-ox 99.6 1.1E-12 2.4E-17 156.0 30.8 298 633-972 102-455 (459)
363 PRK07503 methionine gamma-lyas 99.6 2.4E-13 5.1E-18 159.4 24.7 212 634-889 67-283 (403)
364 PRK07811 cystathionine gamma-s 99.6 1.3E-13 2.9E-18 160.8 22.3 279 634-998 63-353 (388)
365 PLN00145 tyrosine/nicotianamin 99.6 1.6E-12 3.4E-17 154.0 31.7 312 628-972 94-425 (430)
366 PRK05994 O-acetylhomoserine am 99.6 4.2E-13 9E-18 158.3 26.7 152 214-374 66-223 (427)
367 PRK03321 putative aminotransfe 99.6 2.3E-13 5.1E-18 156.8 24.0 280 635-969 60-349 (352)
368 PRK02627 acetylornithine amino 99.6 1.6E-12 3.5E-17 152.1 31.4 288 633-971 82-394 (396)
369 PRK07050 cystathionine beta-ly 99.6 2E-13 4.4E-18 159.4 23.6 286 634-971 67-391 (394)
370 PLN02721 threonine aldolase 99.6 3.4E-13 7.5E-18 155.0 25.1 273 213-529 42-348 (353)
371 PRK06149 hypothetical protein; 99.6 6.5E-13 1.4E-17 171.1 30.3 298 633-971 625-970 (972)
372 PRK04870 histidinol-phosphate 99.6 5.7E-13 1.2E-17 153.8 27.0 282 635-968 66-355 (356)
373 PLN02509 cystathionine beta-ly 99.6 1.9E-13 4E-18 161.6 23.2 216 634-896 135-359 (464)
374 TIGR00474 selA seryl-tRNA(sec) 99.6 3.9E-13 8.5E-18 158.4 25.9 293 634-965 124-453 (454)
375 TIGR00707 argD acetylornithine 99.6 8.5E-13 1.8E-17 153.5 28.5 290 634-968 71-378 (379)
376 PRK09276 LL-diaminopimelate am 99.6 7.5E-13 1.6E-17 154.5 28.0 294 628-965 69-382 (385)
377 PRK08776 cystathionine gamma-s 99.6 9.6E-13 2.1E-17 154.1 28.8 272 214-528 63-389 (405)
378 TIGR00699 GABAtrns_euk 4-amino 99.6 8.7E-13 1.9E-17 155.9 28.6 286 634-968 107-463 (464)
379 PLN02242 methionine gamma-lyas 99.6 9.8E-14 2.1E-18 163.0 20.5 220 634-896 78-305 (418)
380 PRK10534 L-threonine aldolase; 99.6 1.1E-13 2.4E-18 158.2 20.3 282 634-969 36-331 (333)
381 PRK06460 hypothetical protein; 99.6 1.2E-12 2.6E-17 152.1 29.2 213 212-467 46-264 (376)
382 PRK08153 histidinol-phosphate 99.6 9.2E-13 2E-17 153.0 28.1 289 635-973 70-367 (369)
383 PRK06234 methionine gamma-lyas 99.6 5.5E-13 1.2E-17 156.2 26.4 219 634-896 66-294 (400)
384 PRK08574 cystathionine gamma-s 99.6 1.6E-13 3.5E-18 159.8 21.8 277 634-996 55-344 (385)
385 PRK06084 O-acetylhomoserine am 99.6 3.5E-13 7.7E-18 158.6 24.9 153 215-376 62-220 (425)
386 KOG0629 Glutamate decarboxylas 99.6 1.9E-13 4.1E-18 151.3 21.0 327 625-968 134-506 (510)
387 TIGR02379 ECA_wecE TDP-4-keto- 99.6 1E-12 2.2E-17 152.6 28.3 304 634-969 33-375 (376)
388 PRK08045 cystathionine gamma-s 99.6 1.1E-12 2.3E-17 152.9 28.4 272 214-528 55-381 (386)
389 PRK09148 aminotransferase; Val 99.6 1.1E-12 2.3E-17 154.3 28.6 307 628-973 68-392 (405)
390 PRK07810 O-succinylhomoserine 99.6 1.9E-13 4.2E-18 159.9 22.3 285 634-999 72-367 (403)
391 PF00155 Aminotran_1_2: Aminot 99.6 1.5E-13 3.3E-18 158.7 21.1 290 636-965 48-363 (363)
392 PRK06176 cystathionine gamma-s 99.6 3.7E-13 8.1E-18 156.5 24.2 209 634-889 52-266 (380)
393 PRK09147 succinyldiaminopimela 99.6 1.5E-12 3.2E-17 152.6 29.5 297 628-969 65-394 (396)
394 PRK08045 cystathionine gamma-s 99.6 1.6E-13 3.4E-18 159.9 20.9 207 634-889 54-269 (386)
395 PRK02731 histidinol-phosphate 99.6 1.6E-12 3.5E-17 150.6 29.4 265 214-529 70-362 (367)
396 PRK08068 transaminase; Reviewe 99.6 1.4E-12 3E-17 152.6 28.9 293 628-965 70-383 (389)
397 PRK06148 hypothetical protein; 99.6 6.3E-13 1.4E-17 171.3 28.4 299 634-972 665-1011(1013)
398 KOG0053 Cystathionine beta-lya 99.6 3.4E-13 7.4E-18 152.2 22.7 160 215-383 81-247 (409)
399 TIGR01326 OAH_OAS_sulfhy OAH/O 99.6 5.1E-13 1.1E-17 157.4 25.3 295 634-998 59-381 (418)
400 PRK08297 L-lysine aminotransfe 99.6 6.2E-13 1.3E-17 157.5 26.0 295 634-972 94-442 (443)
401 PRK05939 hypothetical protein; 99.6 1.5E-12 3.1E-17 152.2 28.8 229 634-896 49-294 (397)
402 TIGR01365 serC_2 phosphoserine 99.6 5.8E-13 1.3E-17 153.4 25.1 294 210-528 38-368 (374)
403 PLN02656 tyrosine transaminase 99.6 1.4E-12 3.1E-17 153.4 29.0 304 628-970 73-402 (409)
404 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.6 1.3E-12 2.8E-17 152.1 28.1 306 634-969 33-374 (375)
405 TIGR03251 LAT_fam L-lysine 6-t 99.5 6.7E-13 1.4E-17 156.9 26.0 290 634-967 87-430 (431)
406 PRK00615 glutamate-1-semialdeh 99.5 4.6E-13 1E-17 157.8 24.4 298 634-974 95-431 (433)
407 TIGR01264 tyr_amTase_E tyrosin 99.5 2.2E-12 4.7E-17 151.5 30.1 263 679-971 118-399 (401)
408 PF01041 DegT_DnrJ_EryC1: DegT 99.5 4.5E-13 9.9E-18 155.1 23.9 301 633-966 26-363 (363)
409 TIGR02080 O_succ_thio_ly O-suc 99.5 1.9E-12 4.2E-17 150.6 28.5 212 214-468 54-272 (382)
410 PRK05967 cystathionine beta-ly 99.5 5.8E-13 1.3E-17 154.5 24.0 217 634-896 66-290 (395)
411 PRK03317 histidinol-phosphate 99.5 1.1E-12 2.3E-17 152.3 26.3 289 629-970 66-363 (368)
412 PRK06702 O-acetylhomoserine am 99.5 5E-13 1.1E-17 156.6 23.6 298 634-999 63-387 (432)
413 PRK01533 histidinol-phosphate 99.5 4.7E-13 1E-17 155.2 23.1 277 636-971 68-355 (366)
414 COG1982 LdcC Arginine/lysine/o 99.5 5.7E-13 1.2E-17 156.0 23.7 345 634-1017 72-447 (557)
415 PRK11658 UDP-4-amino-4-deoxy-L 99.5 1E-12 2.2E-17 153.0 26.0 287 213-528 35-374 (379)
416 PLN02187 rooty/superroot1 99.5 5.7E-12 1.2E-16 150.4 32.8 311 627-973 107-440 (462)
417 PRK06348 aspartate aminotransf 99.5 2.5E-12 5.5E-17 150.1 29.3 299 628-968 66-382 (384)
418 PRK06107 aspartate aminotransf 99.5 1.2E-12 2.6E-17 153.8 26.6 306 628-971 70-400 (402)
419 PF00282 Pyridoxal_deC: Pyrido 99.5 4.5E-13 9.7E-18 155.1 22.5 315 139-482 10-372 (373)
420 COG1982 LdcC Arginine/lysine/o 99.5 5.5E-13 1.2E-17 156.1 23.1 279 212-529 71-404 (557)
421 TIGR03576 pyridox_MJ0158 pyrid 99.5 7.3E-13 1.6E-17 152.1 23.9 280 629-968 51-344 (346)
422 PRK06918 4-aminobutyrate amino 99.5 3.9E-12 8.5E-17 151.4 31.0 299 634-974 99-446 (451)
423 TIGR00700 GABAtrnsam 4-aminobu 99.5 4.9E-12 1.1E-16 149.4 31.5 292 634-969 78-418 (420)
424 PRK13355 bifunctional HTH-doma 99.5 2E-12 4.4E-17 156.6 28.6 309 627-971 184-514 (517)
425 PRK08056 threonine-phosphate d 99.5 1.8E-12 3.8E-17 149.8 26.6 283 635-969 58-353 (356)
426 PRK07683 aminotransferase A; V 99.5 2.1E-12 4.5E-17 151.0 27.3 300 628-970 65-382 (387)
427 PRK05166 histidinol-phosphate 99.5 2.2E-12 4.7E-17 149.9 27.2 282 636-969 75-369 (371)
428 PRK05939 hypothetical protein; 99.5 2.5E-12 5.4E-17 150.3 27.5 142 213-361 49-196 (397)
429 PRK06434 cystathionine gamma-l 99.5 2.1E-12 4.5E-17 149.8 26.5 210 213-467 66-281 (384)
430 PRK06460 hypothetical protein; 99.5 6E-13 1.3E-17 154.6 22.0 282 634-998 47-336 (376)
431 cd01494 AAT_I Aspartate aminot 99.5 2.3E-13 5E-18 138.4 16.4 161 634-812 2-170 (170)
432 PLN03226 serine hydroxymethylt 99.5 1.2E-12 2.7E-17 155.7 24.9 285 216-529 85-415 (475)
433 PRK05387 histidinol-phosphate 99.5 5.7E-12 1.2E-16 145.2 29.5 268 215-528 64-348 (353)
434 TIGR01326 OAH_OAS_sulfhy OAH/O 99.5 2.5E-12 5.5E-17 151.5 27.0 142 214-361 60-207 (418)
435 COG0399 WecE Predicted pyridox 99.5 4.9E-12 1.1E-16 144.0 28.1 300 634-970 36-372 (374)
436 PRK07269 cystathionine gamma-s 99.5 7.1E-13 1.5E-17 153.2 21.4 212 634-897 56-279 (364)
437 PRK07366 succinyldiaminopimela 99.5 2.2E-12 4.8E-17 150.8 25.7 299 628-968 68-387 (388)
438 PRK07671 cystathionine beta-ly 99.5 8.1E-13 1.7E-17 153.6 21.8 206 634-889 52-266 (377)
439 COG2873 MET17 O-acetylhomoseri 99.5 5.3E-12 1.2E-16 138.5 26.5 296 636-998 66-387 (426)
440 PTZ00433 tyrosine aminotransfe 99.5 3.6E-12 7.8E-17 150.2 27.4 307 628-972 75-409 (412)
441 PRK07908 hypothetical protein; 99.5 3.1E-12 6.7E-17 147.4 26.3 277 636-969 62-345 (349)
442 PRK07568 aspartate aminotransf 99.5 4.9E-12 1.1E-16 148.1 28.4 257 679-972 111-393 (397)
443 PRK04781 histidinol-phosphate 99.5 4.3E-12 9.2E-17 147.1 27.4 284 635-969 62-361 (364)
444 PRK00062 glutamate-1-semialdeh 99.5 2.4E-12 5.1E-17 152.2 25.6 289 634-971 92-424 (426)
445 TIGR01140 L_thr_O3P_dcar L-thr 99.5 1.8E-12 3.8E-17 148.3 23.8 269 635-966 50-330 (330)
446 PRK06084 O-acetylhomoserine am 99.5 1.3E-12 2.9E-17 153.8 23.3 222 635-889 61-308 (425)
447 PRK15481 transcriptional regul 99.5 3.6E-12 7.8E-17 151.1 27.2 251 679-969 164-429 (431)
448 PRK08363 alanine aminotransfer 99.5 3.4E-12 7.4E-17 149.7 26.5 306 628-971 70-394 (398)
449 TIGR02080 O_succ_thio_ly O-suc 99.5 9.1E-13 2E-17 153.3 20.9 284 634-1000 53-345 (382)
450 PLN00143 tyrosine/nicotianamin 99.5 2E-11 4.4E-16 143.7 32.5 312 628-971 74-404 (409)
451 cd00615 Orn_deC_like Ornithine 99.5 1.6E-13 3.5E-18 154.3 13.8 153 212-378 60-236 (294)
452 COG1103 Archaea-specific pyrid 99.5 4.2E-12 9.1E-17 133.2 22.9 303 634-971 63-380 (382)
453 PLN02271 serine hydroxymethylt 99.5 2.3E-12 5E-17 151.4 23.5 290 216-528 199-535 (586)
454 TIGR01265 tyr_nico_aTase tyros 99.5 1.4E-11 3E-16 144.8 30.4 296 636-970 77-400 (403)
455 TIGR03588 PseC UDP-4-keto-6-de 99.5 3.9E-12 8.4E-17 148.3 25.3 289 213-528 31-377 (380)
456 PRK06225 aspartate aminotransf 99.5 2.1E-11 4.6E-16 142.1 31.3 305 171-529 33-372 (380)
457 PRK04260 acetylornithine amino 99.5 2E-11 4.3E-16 142.1 30.8 264 651-968 87-374 (375)
458 cd00617 Tnase_like Tryptophana 99.5 7.8E-12 1.7E-16 146.8 27.3 319 634-988 55-425 (431)
459 TIGR03538 DapC_gpp succinyldia 99.5 8.7E-12 1.9E-16 146.0 27.7 292 628-967 64-391 (393)
460 KOG1383 Glutamate decarboxylas 99.5 6.1E-12 1.3E-16 141.7 24.5 354 139-529 54-442 (491)
461 PRK08175 aminotransferase; Val 99.5 1.2E-11 2.6E-16 145.0 28.4 303 628-969 67-387 (395)
462 PRK06836 aspartate aminotransf 99.5 1.4E-11 3E-16 144.4 28.0 297 628-971 73-391 (394)
463 KOG1404 Alanine-glyoxylate ami 99.5 1.9E-12 4.1E-17 142.6 18.6 323 592-965 62-432 (442)
464 PRK09265 aminotransferase AlaT 99.5 2.1E-11 4.6E-16 143.3 29.0 297 636-971 76-401 (404)
465 PRK09105 putative aminotransfe 99.5 2.7E-11 5.9E-16 140.7 29.4 264 213-528 80-365 (370)
466 KOG0257 Kynurenine aminotransf 99.5 4.1E-12 8.8E-17 142.0 21.0 296 572-910 18-344 (420)
467 PRK08247 cystathionine gamma-s 99.5 5.6E-12 1.2E-16 146.2 23.1 209 634-889 54-268 (366)
468 PRK05957 aspartate aminotransf 99.5 4.4E-11 9.5E-16 139.9 30.7 306 170-528 31-380 (389)
469 PTZ00377 alanine aminotransfer 99.5 3.9E-11 8.5E-16 144.2 30.9 312 628-973 115-477 (481)
470 PRK08636 aspartate aminotransf 99.5 2.4E-11 5.2E-16 142.8 28.5 306 627-971 70-400 (403)
471 PF01053 Cys_Met_Meta_PP: Cys/ 99.4 3.3E-12 7.1E-17 147.9 20.6 210 634-889 57-274 (386)
472 PRK06358 threonine-phosphate d 99.4 1.5E-11 3.3E-16 142.0 26.0 281 635-969 57-353 (354)
473 PRK06108 aspartate aminotransf 99.4 7.3E-11 1.6E-15 137.5 31.9 278 207-528 61-377 (382)
474 PTZ00376 aspartate aminotransf 99.4 5.5E-12 1.2E-16 148.3 22.4 300 627-970 71-402 (404)
475 PRK02610 histidinol-phosphate 99.4 2.1E-11 4.6E-16 141.8 27.0 247 681-971 117-371 (374)
476 PRK00854 rocD ornithine--oxo-a 99.4 3.7E-11 8.1E-16 141.0 28.8 276 211-528 83-396 (401)
477 PRK08088 4-aminobutyrate amino 99.4 4.5E-11 9.9E-16 141.4 29.6 293 635-971 87-423 (425)
478 PRK05664 threonine-phosphate d 99.4 2.5E-11 5.4E-16 138.8 26.5 270 635-971 52-328 (330)
479 PRK06425 histidinol-phosphate 99.4 1.9E-11 4.1E-16 139.9 25.1 276 635-969 43-331 (332)
480 PF00155 Aminotran_1_2: Aminot 99.4 1.6E-11 3.5E-16 141.8 24.7 280 195-527 37-363 (363)
481 PRK07908 hypothetical protein; 99.4 6.6E-11 1.4E-15 136.3 29.5 297 172-528 28-342 (349)
482 PF01041 DegT_DnrJ_EryC1: DegT 99.4 1.2E-11 2.5E-16 143.4 23.1 281 212-528 26-363 (363)
483 TIGR01140 L_thr_O3P_dcar L-thr 99.4 3.7E-11 7.9E-16 137.4 26.0 262 214-528 50-330 (330)
484 PRK07505 hypothetical protein; 99.4 1E-10 2.2E-15 137.5 30.4 317 164-529 45-395 (402)
485 PRK14807 histidinol-phosphate 99.4 1.2E-10 2.5E-15 134.4 30.4 266 214-528 62-347 (351)
486 PLN02376 1-aminocyclopropane-1 99.4 7.6E-11 1.6E-15 141.7 29.8 306 628-973 94-440 (496)
487 PRK03967 histidinol-phosphate 99.4 2.5E-11 5.3E-16 139.3 24.3 271 636-970 59-333 (337)
488 PRK08056 threonine-phosphate d 99.4 1.1E-10 2.5E-15 134.8 29.7 297 172-528 26-350 (356)
489 PRK05839 hypothetical protein; 99.4 3.8E-11 8.3E-16 139.7 25.9 289 628-969 60-372 (374)
490 TIGR03537 DapC succinyldiamino 99.4 1.7E-10 3.7E-15 133.0 31.1 267 217-528 42-348 (350)
491 PRK05764 aspartate aminotransf 99.4 1.3E-10 2.8E-15 136.0 30.3 269 214-528 71-386 (393)
492 PRK04635 histidinol-phosphate 99.4 3.3E-11 7.2E-16 139.1 24.8 266 215-529 64-351 (354)
493 PRK07049 methionine gamma-lyas 99.4 5.5E-11 1.2E-15 140.3 26.8 211 215-468 87-315 (427)
494 PRK03158 histidinol-phosphate 99.4 1.1E-10 2.5E-15 134.8 29.1 265 213-528 66-356 (359)
495 TIGR03540 DapC_direct LL-diami 99.4 3.7E-10 8E-15 131.8 33.4 269 215-528 71-381 (383)
496 PRK06209 glutamate-1-semialdeh 99.4 1.9E-11 4.1E-16 144.6 22.7 294 636-974 92-408 (431)
497 COG1103 Archaea-specific pyrid 99.4 6.6E-11 1.4E-15 124.3 23.8 276 212-529 62-376 (382)
498 KOG1368 Threonine aldolase [Am 99.4 6.6E-12 1.4E-16 133.5 16.5 285 636-966 60-363 (384)
499 PRK06959 putative threonine-ph 99.4 7.4E-11 1.6E-15 135.4 26.0 272 635-974 56-336 (339)
500 PRK07865 N-succinyldiaminopime 99.4 3.7E-10 8E-15 130.9 32.0 254 226-528 84-363 (364)
No 1
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=100.00 E-value=2.9e-229 Score=1893.05 Aligned_cols=926 Identities=68% Similarity=1.111 Sum_probs=884.6
Q ss_pred cccccccccCCCCccccccCCCCCHHHHHHHHHHhCCCCHHHhhhccCCccc-ccCCCCCCCCCCCCCHHHHHHHHHHHh
Q 001586 83 QTRGISVEALKPSDTFARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSI-RIDSMKFSKFDEGLTESQMIEHMQKLA 161 (1049)
Q Consensus 83 ~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~ml~~~g~~~~~~l~~~~ip~~~-~~~~~~lp~~~~~~sE~e~~~~~~~la 161 (1049)
.++++...+++++|+|.+|||||++.|+++||+++|++|+|+|++++||++| +++++.+| ++++|.|+++|++++|
T Consensus 37 ~~~~~~~~~~~~~d~F~~RHigp~~~dq~~ml~tlG~~dl~~l~~~~VP~~Ir~~~~l~~~---~~~~E~eml~~l~~ia 113 (1001)
T KOG2040|consen 37 ATRSQSERIFPPLDTFPRRHIGPSPTDQQQMLDTLGYKDLDELIEKTVPKSIRLKRPLKMD---KPLCESEMLQHLEDIA 113 (1001)
T ss_pred hhcchhhhccCcccccccccCCCCchHHHHHHHhcChhhHHHHHHhhcchhhcccchhcCC---CCcCHHHHHHHHHHHH
Confidence 5666777889999999999999999999999999999999999999999999 88999997 8999999999999999
Q ss_pred cCCCccccccCCCCCCCCCcHHHHHHHHhCCccccccCCChhhHhhhHHHHHHHHHHHHHHHhCCCCcceEeccchHHHH
Q 001586 162 SMNKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAA 241 (1049)
Q Consensus 162 ~~n~~~~~~lG~g~y~~~~p~~i~~~~~~~~~~~t~ytpyq~e~sqg~le~l~e~q~~ia~L~G~~~~n~sl~~~~Ta~~ 241 (1049)
+||+.|++|+|+|||++.+|++|.||+++||+|||+|||||||||||+||++++||+||+||||++.+|+|++|+|||++
T Consensus 114 ~kNk~~ksfIGmGYyn~~vP~~I~RNilenp~W~TqYTPYQ~EIsQGRLEsllNyQTmi~dlTGL~~aNASLLDEgTAaa 193 (1001)
T KOG2040|consen 114 SKNKIWKSFIGMGYYNTHVPAVILRNILENPGWYTQYTPYQAEISQGRLESLLNYQTMITDLTGLPMANASLLDEGTAAA 193 (1001)
T ss_pred hhhhHHHHhhccccccccCcHHHHHHhhhCCcceeccCCCchhhhhhhHHHHhhhHHhhhhccCCcccchhhhccchhHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCcchhhccCCCEeEEEEEcCCCCeeeccHHHHHHH
Q 001586 242 EAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKDIDYKSGDVCGVLVQYPGTEGEVLDYGDFIKN 321 (1049)
Q Consensus 242 eA~~~a~~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~~~~l~~l~~~t~~V~v~~pn~~G~i~di~~I~~~ 321 (1049)
|||.|+.+.+ +++|++|+..+||+++++++|+++++|++++..++.+.....+++++|+||||++.|.|.|+.++++.
T Consensus 194 EAm~l~~~~~--krkk~vvd~~~hpqtlsV~~TRa~~~~i~v~~~~~~~~~~s~~~v~gvlvQYP~t~G~i~d~~el~~~ 271 (1001)
T KOG2040|consen 194 EAMALCNRIN--KRKKFVVDSNCHPQTLSVVKTRAKGFGIKVVVSDIKEADYSSKDVSGVLVQYPDTEGSVLDFDELVEL 271 (1001)
T ss_pred HHHHHHHhhc--ccceEEecCCCCcchhhhhhccccccceeEEecCHHHhhccccceeEEEEEcCCCCCcccCHHHHHHH
Confidence 9999998877 77889999999999999999999999999988877655444578999999999999999999999999
Q ss_pred HHhCCcEEEEEeccccccCCCCCCcccceEEEecCccccccCCCCCCceEEEEEchhHHhcCCCceeeeeecCCCCccee
Q 001586 322 AHANGVKVVMATDLLALTILKPPGELGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALR 401 (1049)
Q Consensus 322 ah~~galliV~a~~~alg~l~~p~~~GaDivvgs~k~lg~P~~~GGP~~G~l~~~~~l~~~lpgrivG~s~d~~g~~~~~ 401 (1049)
+|+.|.++++++|+++|.+|++|++|||||++||+|+||+||||||||+|||+|+++++|.||||+||+|+|+.|+++|+
T Consensus 272 a~~~~s~vv~atDLLaLtiLrpPgefGaDIavGSsQRFGVPlGYGGPHAaFfAv~~~l~R~mPGRiiGvtkD~~gk~a~R 351 (1001)
T KOG2040|consen 272 AHANGSLVVMATDLLALTILRPPGEFGADIAVGSSQRFGVPLGYGGPHAAFFAVSESLVRMMPGRIIGVTKDALGKEAYR 351 (1001)
T ss_pred hhccCceEEEeehhhHHHccCChhhcCceeeeccccccCccccCCCchHHHHHHHHHHHhhCCCceEeeeecccccHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eecccccccccccccCCCccchhHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEcCCCCcceEEEe
Q 001586 402 VAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVK 481 (1049)
Q Consensus 402 l~lqtreq~irrekaTsni~t~~~l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~g~~~v~~~~~~~~v~i~ 481 (1049)
|+||||||||||+||||||||+|+|+|+|+|+|+.|||++||++|++|++..+.+|+..|++.| .++.+.+||||+.|.
T Consensus 352 LALQTREQHIrRDKATSNICTAQALLANmaAmyaiYHGp~gL~~IArrvh~~T~~l~~~l~~ag-hel~~k~fFDTLkI~ 430 (1001)
T KOG2040|consen 352 LALQTREQHIRRDKATSNICTAQALLANMAAMYAIYHGPHGLKEIARRVHNLTLILAEGLKNAG-HELQHKPFFDTLKIR 430 (1001)
T ss_pred HHHHHHHHHhhhhccchhhhHHHHHHHHHHHHHhhhcCcHHHHHHHHHHHHHHHHHHHHHhhcc-hhhccccccceEEEE
Confidence 9999999999999999999999999999999999999999999999999999999999999998 899988999999999
Q ss_pred cCC-HHHHHHHHHHcCCeeeeecCCeEEEEeccCCCHHHHHHHHHHHhCCCCCCcCHHhhhhhh-----hccCCCCccCC
Q 001586 482 CAD-AHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEV-----ETAIPSGLTRE 555 (1049)
Q Consensus 482 ~~~-~~~v~~~L~~~gI~~~~~~~~~vris~~~~~t~edid~lv~aL~~~~~~~~~~~~l~~~~-----~~~ip~~~~~~ 555 (1049)
+.. ++++.++..+++|+++.+++++|.+|++|+++++|+|.|++.|..+ +..++..+. ....|+.++|+
T Consensus 431 ~~~s~~~~l~rA~~~~iNlr~~ed~tigvslDETv~~~DvddLl~vf~~~-----ss~~~~~E~~~~e~~~~~~s~f~Rt 505 (1001)
T KOG2040|consen 431 CGCSAEEVLDRAAKRQINLRLVEDGTIGVSLDETVTEKDVDDLLWVFNEE-----SSVELVAESMGEECNGIPPSVFKRT 505 (1001)
T ss_pred ecCcHHHHHHHHHhhcCceEEeecCceEEeecccccHHHHHHHHHHHccC-----ChHHHHHHhhhhhccCCCCcccccC
Confidence 986 8899999999999999999999999999999999999999999865 333443221 23578999999
Q ss_pred CCCCCCcccCCCCCHHHHHHHHHHHhccccCcCccccccccccccCccccccccccCcccccCCCCCchhhhhcHHHHHH
Q 001586 556 SPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFN 635 (1049)
Q Consensus 556 ~~~~~~p~~~~~~se~e~~~~l~~l~~~d~~~~~~~i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~~G~~~~i~ 635 (1049)
++||+||||+.+|||++|+|||++|++||++++|+||||||||||+|+..||+|++|++|.++|||+|.||.|||.|++.
T Consensus 506 s~~L~hpVFn~yhSEt~lvRYm~kLenKDlSLvhSMiPLGSCTMKLNsttEmmPiTwp~fanIHPF~P~eQaqGY~~lf~ 585 (1001)
T KOG2040|consen 506 SPYLTHPVFNSYHSETELVRYMKKLENKDLSLVHSMIPLGSCTMKLNSTTEMMPITWPEFANIHPFAPVEQAQGYQQLFT 585 (1001)
T ss_pred CccccchhhhhcccHHHHHHHHHHhhccchhhhhhcccccceeeeccccceeccccchhhccCCCCCchHHHhhHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCEEEEEcCCCCCCC
Q 001586 636 NLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNI 715 (1049)
Q Consensus 636 el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~Vv~V~~d~~g~i 715 (1049)
+++++||++||+|..++||||||+|||++|++||+|++++|+.+|+.||||.|+||+||++|+|+|++|++|.++.+|.+
T Consensus 586 ~Le~~Lc~iTG~D~~s~QPNsGA~GEYaGL~~IRaY~~~kge~hRnvClIPvSAHGTNPASA~MagmkvvpV~~~~~G~i 665 (1001)
T KOG2040|consen 586 ELEKDLCEITGFDSFSLQPNSGAQGEYAGLRVIRAYLESKGEGHRNVCLIPVSAHGTNPASAAMAGMKVVPVGCDANGNI 665 (1001)
T ss_pred HHHHHhheeecccceeecCCCCcccchhhHHHHHHHHHhccCCcceeEEEeecccCCChhhHHhcCCEEEEeeccCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHhcCCCeEEEEEEcCCccccccccHHHHHHHHHHcCCEEEEeccccccccCcCCCCccCCcEEEeCCCccc
Q 001586 716 NIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHLNLHKTF 795 (1049)
Q Consensus 716 D~~~L~~~i~~~~~~taaV~it~Pn~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~Pg~~GaDi~~~s~hK~f 795 (1049)
|+.+|+++.++|+++++++||+||+++|+|+++|+++|+++|+||++||+||||||+|+|+++||++|+|||++|+||||
T Consensus 666 d~~dLk~kaekh~~~Laa~MvTYPST~GvfE~~i~d~cd~iHehGGQVYlDGANMNAqVGlc~pGd~GaDV~HLNLHKTF 745 (1001)
T KOG2040|consen 666 DMVDLKAKAEKHKDNLAALMVTYPSTHGVFEEGIDDICDIIHEHGGQVYLDGANMNAQVGLCRPGDIGADVCHLNLHKTF 745 (1001)
T ss_pred cHHHHHHHHHHhhhhhheeEEecccccccccccHHHHHHHHHhcCCEEEecCCCccceecccCCccccccceeeccccee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHH
Q 001586 796 CIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIA 875 (1049)
Q Consensus 796 ~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~ 875 (1049)
|+|||+||||+|+|++++|++++||++.+..... .+.....+.++++|||++++++++|+||++||..|+++.++.+
T Consensus 746 cIPHGGGGPg~gPIgVK~HLapfLP~HpVvs~~~---~~~~~~~gsVsaaP~Gsa~ILpISwaYikmMG~~GL~~as~~A 822 (1001)
T KOG2040|consen 746 CIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSPGR---PEDTSPVGSVSAAPWGSALILPISWAYIKMMGSGGLKDASKIA 822 (1001)
T ss_pred eecCCCCCCCCCccchhhhccccCCCCCccCCCC---CCCCCCccceeccCCCcceeehhHHHHHHHhcccccchhhHHH
Confidence 9999999999999999999999999998754321 1223446788889999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccCCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEccCCCCH
Q 001586 876 ILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESK 955 (1049)
Q Consensus 876 ~~~a~yL~~~L~~~~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~ 955 (1049)
+.|||||+++|+++|+++|.++++.+.||||+|+++||++.|+++.||+|||+|||||+|+++||++++|||+|||++++
T Consensus 823 iLNaNYMakRLe~hYkil~~~~~~~vaHEFIlD~r~fK~~agieavDvAKRL~DYgFHaPTmswPV~gtLMIEPTESE~k 902 (1001)
T KOG2040|consen 823 ILNANYMAKRLESHYKILFRGENGLVAHEFILDLRPFKKTAGIEAVDVAKRLMDYGFHAPTMSWPVAGTLMIEPTESEDK 902 (1001)
T ss_pred hhhhHHHHHHHhhccceeEecCCcceeeeeeeechhhccccCCcHHHHHHHHHhccCCCCccccccCCceEeccCccccH
Confidence 99999999999999999999988999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCccccccchhhHHHHHhHHHhhccCCCcc------ccCchhhhhhh
Q 001586 956 EELDRYCDALISIREEIAQIENGKADIHNNVLKVTCLFLHHGYFFSYIVKEINICISSSPWNQ------SLFMKPYVYYL 1029 (1049)
Q Consensus 956 eeid~fv~aL~~i~~~i~~i~~g~~~~~~~~l~~~ph~~~~~~~~~~~~~~~~~~~~~~~w~~------~~~~~~~~~~~ 1029 (1049)
+|+||||++|.+|++||++|++|.+|+..|+||++|||+.+ +.+++||| ||||+||||++
T Consensus 903 ~ElDRfcdAliSIreEI~~ie~G~~dk~~n~Lk~aPH~~~~--------------v~s~~WdrpYsRE~AafP~p~lk~~ 968 (1001)
T KOG2040|consen 903 AELDRFCDALISIREEIAQIEEGRQDKRNNPLKMAPHPLED--------------VTSDNWDRPYSREYAAFPAPFLKEN 968 (1001)
T ss_pred HHHHHHHHHHHHHHHHHHHHHccCCCcccCcccCCCCCHHH--------------hhhhccCCccchhhhcCCchhhhhc
Confidence 99999999999999999999999999999999999999955 44899997 79999999999
Q ss_pred cccCCCC
Q 001586 1030 KFGNAGG 1036 (1049)
Q Consensus 1030 ~~~~~~~ 1036 (1049)
|||..=|
T Consensus 969 KfWPtv~ 975 (1001)
T KOG2040|consen 969 KFWPTVG 975 (1001)
T ss_pred ccCCccc
Confidence 9997644
No 2
>PRK12566 glycine dehydrogenase; Provisional
Probab=100.00 E-value=7.4e-198 Score=1777.98 Aligned_cols=915 Identities=54% Similarity=0.931 Sum_probs=848.3
Q ss_pred CCCCccccccCCCCCHHHHHHHHHHhCCCCHHHhhhccCCccc-ccCCCCCCCCCCCCCHHHHHHHHHHHhcCCCccccc
Q 001586 92 LKPSDTFARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSI-RIDSMKFSKFDEGLTESQMIEHMQKLASMNKVYKSF 170 (1049)
Q Consensus 92 ~~~~~~f~~~~~~~~~~~~~~ml~~~g~~~~~~l~~~~ip~~~-~~~~~~lp~~~~~~sE~e~~~~~~~la~~n~~~~~~ 170 (1049)
+.+.|+|.+||||||++|+++||++||++|+||||+++||++| ++++|+|| +++||.|+++|++++|+||+.+++|
T Consensus 7 ~~~~~~f~~rh~g~~~~~~~~ML~~iG~~s~d~l~~~~iP~~ir~~~~l~lp---~~~sE~e~~~~~~~~a~kN~~~~~f 83 (954)
T PRK12566 7 LQEPDAFLRRHLGPDAAEQQAMLDALGVASRAELIEQTVPPAIRLNRPLDLP---AALDEQAALARLRGYAEQNQVWTSL 83 (954)
T ss_pred cccccchhhccCCCCHHHHHHHHHhcCccCHHHHhhccCCHHHhcCCCCCCC---CCCCHHHHHHHHHHHHhcCCCcccc
Confidence 4557899999999999999999999999999999988899999 88889998 7899999999999999999999999
Q ss_pred cCCCCCCCCCcHHHHHHHHhCCccccccCCChhhHhhhHHHHHHHHHHHHHHHhCCCCcceEeccchHHHHHHHHHHhhh
Q 001586 171 IGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNI 250 (1049)
Q Consensus 171 lG~g~y~~~~p~~i~~~~~~~~~~~t~ytpyq~e~sqg~le~l~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a~~~ 250 (1049)
+|+|||+|++|++|+|++++||+|||+|||||||||||+||+|+|||+|||+|||||++|+||||++||++|||.|+.+.
T Consensus 84 iG~G~y~~~~P~vi~~~i~~~~~~yTaYTPYQpEisQG~Lqal~e~Qtmi~~LtGm~vaNASl~D~atA~aEA~~ma~~~ 163 (954)
T PRK12566 84 IGMGYHGTVTPTVILRNVLENPGWYTAYTPYQPEIAQGRLEALLNFQQMTIDLTGLDLANASLLDEATAAAEAMALAKRV 163 (954)
T ss_pred ccccccCCcCcHHHHHHHHhCchhhhcCCCCCchhhhHHHHHHHHHHHHHHHHhCchhhhhhhccchhHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred ccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCcchhhc-cCCCEeEEEEEcCCCCeeeccHHHHHHHHHhCCcEE
Q 001586 251 QKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKDIDY-KSGDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKV 329 (1049)
Q Consensus 251 ~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~~~~l~~-l~~~t~~V~v~~pn~~G~i~di~~I~~~ah~~gall 329 (1049)
+++++++|+|++.+||+++++++||++..|++++.- +++. +++++++|+|||||++|.|+|+++|++++|++|+++
T Consensus 164 ~~~k~~~~~v~~~~hP~~~~v~~t~~~~~g~~i~~~---~~~~~~~~~~~~v~vq~P~~~G~i~d~~~i~~~~h~~gal~ 240 (954)
T PRK12566 164 AKSKSNRFFVDEHCHPQTLSVLRTRAEGFGFELVVD---AVDNLAAHAVFGALLQYPDTHGEIRDLRPLIDQLHGQQALA 240 (954)
T ss_pred hhcCCCEEEECCCCCHHHHHHHHHhhhcCCcEEEEc---chhhcCCCCEEEEEEECCCCceEEccHHHHHHHHHHcCCEE
Confidence 654578999999999999999999999999999874 4444 667899999999999999999999999999999999
Q ss_pred EEEeccccccCCCCCCcccceEEEecCccccccCCCCCCceEEEEEchhHHhcCCCceeeeeecCCCCcceeeecccccc
Q 001586 330 VMATDLLALTILKPPGELGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQ 409 (1049)
Q Consensus 330 iV~a~~~alg~l~~p~~~GaDivvgs~k~lg~P~~~GGP~~G~l~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreq 409 (1049)
+|++|+++|+++++||+|||||+||++|+||+||+|||||+|||+++++++|+||||+||+|+|.+|+++|+|+||||||
T Consensus 241 ~~~~d~laL~ll~~Pge~GADI~vG~~Q~fGvp~~~GGP~ag~~a~~~~~~R~~PGRivG~s~D~~G~~a~~l~LqtREQ 320 (954)
T PRK12566 241 CVAADLLSLLVLTPPGELGADVVLGSTQRFGVPMGYGGPHAAYFACRDDYKRAMPGRIIGVSRDARGNTALRMALQTREQ 320 (954)
T ss_pred EEEeCHHHHhCCCChhhcCCcEEeeCCCcCCCCCCCCCCCeeeeeehHHHHhhCCCCccceeecCCCCeeeehhhhHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccCCCccchhHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEcCCCCcceEEEecC-CHHHH
Q 001586 410 HIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCA-DAHAI 488 (1049)
Q Consensus 410 ~irrekaTsni~t~~~l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~g~~~v~~~~~~~~v~i~~~-~~~~v 488 (1049)
|||||||||||||+|+|+|++|++|++|||++||++|+++++.+|+||+++|.+.| +++...++|++|++++. .+.++
T Consensus 321 HIRReKAtSNICT~qaL~A~~a~~Y~~~~Gp~Gl~~ia~~~~~~a~~l~~~l~~~g-~~~~~~~fF~~~~v~~~~~~~~~ 399 (954)
T PRK12566 321 HIRREKANSNICTAQVLLANIAGFYAVYHGPEGLKRIAQRVHRLTAILAAGLEAKG-IKRLNRHFFDTLTLEVGGAQAAI 399 (954)
T ss_pred HhhhccccchhhHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhcC-CccccCCccceEEEEccCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999987 99987799999999986 37789
Q ss_pred HHHHHHcCCeeeeecCCeEEEEeccCCCHHHHHHHHHHHhCCCCCCcCHHhhhhh-hhccCCCCccCCCCCCCCcccCCC
Q 001586 489 ASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEE-VETAIPSGLTRESPYLTHPVFNKY 567 (1049)
Q Consensus 489 ~~~L~~~gI~~~~~~~~~vris~~~~~t~edid~lv~aL~~~~~~~~~~~~l~~~-~~~~ip~~~~~~~~~~~~p~~~~~ 567 (1049)
.++..++||+++.++++.+.+|++|++|.+|++.++++|...+... +.+.+... ....||+.++|+++|++||+|+++
T Consensus 400 ~~~a~~~~~n~r~~~~~~~~~s~de~~~~~~~~~~~~~f~~~~~~~-~~~~~~~~~~~~~~p~~~~r~~~~~~~p~f~~~ 478 (954)
T PRK12566 400 IESAEAARINLRILGRGRLGVSLDETCDEATVARLFDIFLGADHGL-DVAALDQGALAEGIPAVLQRRTAYLQHPVFNAH 478 (954)
T ss_pred HHHHHHCCCeeEEeCCCeEEEEeCCCCCHHHHHHHHHHhcCCCccc-chhhhccccccccCchhhhcCCccccCcccccC
Confidence 8999999999999988999999999999999999999996321100 11111110 112499999999999999999999
Q ss_pred CCHHHHHHHHHHHhccccCcCccccccccccccCccccccccccCcccccCCCCCchhhhhcHHHHHHHHHHHHHHhhCC
Q 001586 568 HTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGF 647 (1049)
Q Consensus 568 ~se~e~~~~l~~l~~~d~~~~~~~i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~~G~~~~i~el~~~la~l~G~ 647 (1049)
+||.||+|||++|++||.+++++||||||||||+|++.+++|++|+||++.|||||.|++||++|+++|+|+++|+|||+
T Consensus 479 ~SE~el~r~~~~La~kn~~~~~~~~~LGsCTmK~n~~~~~~p~s~~eF~t~hPyqp~e~sQG~lq~i~elq~~l~eLtGm 558 (954)
T PRK12566 479 HSETEMLRYLKQLENKDLALNQSMIPLGSCTMKLNATSEMIPITWPEFAQLHPFAPREQAEGYRAMIDELEAWLCAITGF 558 (954)
T ss_pred CCHHHHHHHHHHHHhcCcCcccCcccCcccccCcCcHHhhhcccchhhhcCCCCCchhhhcCHHHHHHHHHHHHHHHHCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCEEEEEcCCCCCCCCHHHHHHHHHhc
Q 001586 648 DSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEAN 727 (1049)
Q Consensus 648 ~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~Vv~V~~d~~g~iD~~~L~~~i~~~ 727 (1049)
+.+++++++|++||++++|++|.||.++|+.+|++||+|.++|++||.++.+.|++|+.|++|++|.+|+++|+++++++
T Consensus 559 d~~Sl~p~sGA~gE~A~Lmair~yh~~~Ge~~r~~vLIp~saHgtNpasa~~~GieVv~Vp~D~~G~iDle~L~a~I~~~ 638 (954)
T PRK12566 559 DAICMQPNSGAQGEYAGLLAIRRYHRSRGQSQRDICLIPSSAHGTNPASAQMAGMRVVIVECDPDGNVDLDDLKAKAAAA 638 (954)
T ss_pred CeEeecCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEecccccccCHHHHHHCCCEEEEeccCCCCCcCHHHHHHHhhcc
Confidence 99999999999999999999999999999888999999999999999999999999999999999999999999999888
Q ss_pred CCCeEEEEEEcCCccccccccHHHHHHHHHHcCCEEEEeccccccccCcCCCCccCCcEEEeCCCcccccCCCCCCCcee
Q 001586 728 RDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHLNLHKTFCIPHGGGGPGMG 807 (1049)
Q Consensus 728 ~~~taaV~it~Pn~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~Pg~~GaDi~~~s~hK~f~~P~g~GGPg~G 807 (1049)
++++++|++++|+++|++++++++|+++||++|++|+|||||+++++++..|+++|+|++++|+||||++|+|+|||++|
T Consensus 639 ~~~laaVmiT~Pnt~Gv~e~~V~eI~~iah~~Galv~vDgA~~~a~~~l~~Pg~~GADi~~~s~HKtf~~P~G~GGP~vG 718 (954)
T PRK12566 639 GDRLSCLMITYPSTHGVYEEGIREICEVVHQHGGQVYMDGANLNAQVGLARPADIGADVSHMNLHKTFCIPHGGGGPGMG 718 (954)
T ss_pred CCCEEEEEEEecCcCceecchHHHHHHHHHHcCCEEEEEeeChhhccCCCChhhcCCCEEEecCCcccCcCccCCCCccc
Confidence 89999999999999999886799999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHh
Q 001586 808 PIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLE 887 (1049)
Q Consensus 808 ~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~ 887 (1049)
++++++++.+++|+....... +.+.++++++++ ++|+++++++||+||.++|.+ +++.++.++.+|+|++++|+
T Consensus 719 ~iav~~~L~pfLp~~P~~d~~--G~~~r~ga~S~~---~~gsa~~l~~A~~Yi~~lG~e-Lk~aa~~ailnAnYla~rL~ 792 (954)
T PRK12566 719 PIGVRAHLAPFVANHPVVPVE--GPDPNNGAVSAA---PWGSASILPISWMYIAMMGPQ-LADASEVAILSANYLANQLG 792 (954)
T ss_pred hhhhhhhhhhhccCCCCcCCC--CCCCCCCceeec---ccchHHHHHHHHHHHHHHCHH-HHHHHHHHHHHHHHHHHHhH
Confidence 999999988888865421100 122334444444 467999999999999999999 99999999999999999999
Q ss_pred ccCCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEccCCCCHHHHHHHHHHHHH
Q 001586 888 KHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALIS 967 (1049)
Q Consensus 888 ~~~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~eeid~fv~aL~~ 967 (1049)
+.+++.|.+.+++++|||+++++++++..+++..+|+++|.++||++++++||+.+++||||||+++++|||+|+++|++
T Consensus 793 ~~~~v~~~~~~~~~~hEfii~~~~l~~~~g~~~~dvakRL~d~Gihapt~~fPv~~~LmIepTE~eskeEIDrf~eAL~~ 872 (954)
T PRK12566 793 GAFPVLYRGRNERVAHECILDLRPLKAQTGISEEDVAKRLMDYGFHAPTMSFPVPGTLMVEPTESESKAELDRFVEAMLS 872 (954)
T ss_pred hhCCCCcCCCCCCeeeEEEEEccccccccCCCHHHHHHHHHHCCcEEeEEeeccCCEEEEEeeeeCCHHHHHHHHHHHHH
Confidence 88888886555679999999998776656788999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCCCCCCcccccCccccccchhhHHHHHhHHHhhccCCCcc------ccCchhhhhhhcccCCC
Q 001586 968 IREEIAQIENGKADIHNNVLKVTCLFLHHGYFFSYIVKEINICISSSPWNQ------SLFMKPYVYYLKFGNAG 1035 (1049)
Q Consensus 968 i~~~i~~i~~g~~~~~~~~l~~~ph~~~~~~~~~~~~~~~~~~~~~~~w~~------~~~~~~~~~~~~~~~~~ 1035 (1049)
|++|+++|++|+++.++||||++|||+.+ ++ . +|+| ||||+||+|++|||..=
T Consensus 873 I~~e~~~v~~g~~~~~~n~l~~apht~~~-------------~~-~-~w~~~y~r~~a~~p~~~~~~~k~wp~v 931 (954)
T PRK12566 873 IRAEIGKVQEGNWPAEDNPLKRAPHTLAD-------------VT-G-VWQRPYSIEQAVTPSAHARAHKYWPAV 931 (954)
T ss_pred HHHHHHHHHcCCCCcccCcccCCCCchHH-------------hh-c-cCCCCcChhhcccCCCcccCCCcCCCc
Confidence 99999999999999999999999999966 55 3 8997 69999999999999753
No 3
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=100.00 E-value=4.9e-193 Score=1750.05 Aligned_cols=913 Identities=58% Similarity=0.970 Sum_probs=852.2
Q ss_pred cCCCCCHHHHHHHHHHhCCCCHHHhhhccCCccc-ccCCCCCCCCCCCCCHHHHHHHHHHHhcCCCccccccCCCCCCCC
Q 001586 101 RHNSATPEDQAKMSELVGLDNLDSLIDATVPKSI-RIDSMKFSKFDEGLTESQMIEHMQKLASMNKVYKSFIGMGYYNTH 179 (1049)
Q Consensus 101 ~~~~~~~~~~~~ml~~~g~~~~~~l~~~~ip~~~-~~~~~~lp~~~~~~sE~e~~~~~~~la~~n~~~~~~lG~g~y~~~ 179 (1049)
|||||+++|+++||++||++|+||||+++||+++ ++++++|| +++||.|+++|+++||++|+.+++|+|+|||+|+
T Consensus 1 rh~g~~~~~~~~ML~~iG~~s~d~l~~~~iP~~i~~~~~l~lp---~~~sE~e~~~~~~~la~~N~~~~~fig~G~y~~~ 77 (939)
T TIGR00461 1 RHLGPSPSDQKKMLKTMGYSDLNALIEQLVPPNILKRRPLQLE---APSKEYEALAHLKKIASKNHKFKSYIGMGYYGTI 77 (939)
T ss_pred CCCCcCHHHHHHHHHhcCCCCHHHHhhccCCHHHhcCCCCCCC---CCCCHHHHHHHHHHHHhcCCCccccCCCCcCCCc
Confidence 8999999999999999999999999999999999 88889998 7899999999999999999999999999999999
Q ss_pred CcHHHHHHHHhCCccccccCCChhhHhhhHHHHHHHHHHHHHHHhCCCCcceEeccchHHHHHHHHHHhhhccCCCCEEE
Q 001586 180 VPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFI 259 (1049)
Q Consensus 180 ~p~~i~~~~~~~~~~~t~ytpyq~e~sqg~le~l~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a~~~~~~~g~~Vl 259 (1049)
+|++|+|++++||+|||+|||||||+|||+||+|+|||+|+|+|||||++|+||+|++||++|||.||.+..++++++||
T Consensus 78 ~p~~i~r~v~~~p~~~TaytPyQ~EisQG~Le~l~e~Qt~i~eLtGm~~aNaSl~d~atA~aEa~~~a~~~~~~~~~~vl 157 (939)
T TIGR00461 78 LPPVIQRNLLENPGWYTAYTPYQPEISQGRLEALLNFQTVVSDLTGLPVANASLLDEGTAAAEAMALSFNVSKKKANKFF 157 (939)
T ss_pred CChHHHHHHHhCchhhhcCCCCChhhhhHHHHHHHHHHHHHHHHHCCChhhhhccchhhHHHHHHHHHHHhhcCCCCEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999876545678999
Q ss_pred EcCCCCHHHHHHHHHhhcCCCeEEEEeCcchhhc-cCCCEeEEEEEcCCCCeeeccHHHHHHHHHhCCcEEEEEeccccc
Q 001586 260 IASNCHPQTIDICITRADGFDIKVVVSDLKDIDY-KSGDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLAL 338 (1049)
Q Consensus 260 v~~~~Hps~~~~l~~~a~~~gi~v~~v~~~~l~~-l~~~t~~V~v~~pn~~G~i~di~~I~~~ah~~galliV~a~~~al 338 (1049)
|++.+||+++.+++|+++..|++++.+|.++|+. + ++++|++|+||++|.++|+++|++++|++|++++|++|++++
T Consensus 158 v~~~~hP~~~~v~~t~a~~~g~~v~~~~~~~l~~~~--~~~~v~~q~Pn~~G~ied~~~i~~~~h~~gal~~~~ad~~al 235 (939)
T TIGR00461 158 VAKDLHPQTKSVLHTRAKPFGIEVIVVDCSDIKKAV--DVFGCLLQYPATDGSILDYKQLIDALHSHKSLVSVAADLMAL 235 (939)
T ss_pred ECCCCCcchHHHHHHHHHhcCcEEEEEcHHHHhhcC--CEEEEEEECCCCCeEEecHHHHHHHHHHcCCEEEEEechHHh
Confidence 9999999999999999999999999999988876 5 689999999999999999999999999999999999999999
Q ss_pred cCCCCCCcccceEEEecCccccccCCCCCCceEEEEEchhHHhcCCCceeeeeecCCCCcceeeecccccccccccccCC
Q 001586 339 TILKPPGELGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATS 418 (1049)
Q Consensus 339 g~l~~p~~~GaDivvgs~k~lg~P~~~GGP~~G~l~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irrekaTs 418 (1049)
+++++|++|||||+||++|+||+||||||||+|||+|+++++|+||||+||+|+|.+|+++|+|+|||||||||||||||
T Consensus 236 ~ll~~Pge~GaDi~vg~~q~fg~p~g~GGP~aG~~a~~~~l~r~lPgrivG~s~D~~G~~~~~l~LqtReqhIrRekAtS 315 (939)
T TIGR00461 236 TLLTPPGHYGADIVLGSSQRFGVPMGYGGPHAAFFAVKDEYNRKMPGRIVGVSKDALGNTALRLALQTREQHIRRDKATS 315 (939)
T ss_pred CCcCCHHHcCCcEEeeCCCccCCCCCCCCCceeeeeecHhhHhhCCCCceeEEecCCCCccceeecccccccccccccCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccchhHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEcCCCCcceEEEecC--CHHHHHHHHHHcC
Q 001586 419 NICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCA--DAHAIASAAYKIE 496 (1049)
Q Consensus 419 ni~t~~~l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~g~~~v~~~~~~~~v~i~~~--~~~~v~~~L~~~g 496 (1049)
||||+|+|+|++|++|+.|||++||++|+++++.+|+||+++|++.| +++..+++|++|+|+++ .++++.++|.++|
T Consensus 316 NICt~qaL~a~~a~~Y~~~~G~~GL~~iA~~~~~~a~~l~~~L~~~G-~~~~~~~fF~~~~v~~~~~~~~~i~~~~~~~g 394 (939)
T TIGR00461 316 NICTAQVLLANVASSYCVYHGPKGLKNIARRIHSLTSILANGLENDP-HELINKTWFDTLTVKVGNGISSELLKAAEEFN 394 (939)
T ss_pred chhHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhCC-CcccCCCccceEEEEeCCCCHHHHHHHHHHCC
Confidence 99999999999999999999999999999999999999999999987 99987789999999987 3889999999999
Q ss_pred CeeeeecCCeEEEEeccCCCHHHHHHHHHHHhCCCCCCcCHHhhhhhhhccCCCCccCCCCCCCCcccCCCCCHHHHHHH
Q 001586 497 MNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRY 576 (1049)
Q Consensus 497 I~~~~~~~~~vris~~~~~t~edid~lv~aL~~~~~~~~~~~~l~~~~~~~ip~~~~~~~~~~~~p~~~~~~se~e~~~~ 576 (1049)
|+++...++.+++|+||++|++|||.|+++|..........+.+.......||+.++|+++++.+|+|+++|||.||+||
T Consensus 395 i~l~~~~~~~i~~s~~E~~t~~di~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~~~~~~~f~~~~sE~e~~r~ 474 (939)
T TIGR00461 395 INLRAVDTTTVGIALDETTTKADVENLLKVFDGEDNHGLSSQFLSEDVSNSFPREFQRTDEILRNEVFNMYHSETEMLRY 474 (939)
T ss_pred CeeeecCCCEEEEEeecCCCHHHHHHHHHHhcCCCccccchhhhhhhhcccCchhhhccCcccCCcccccCCCHHHHHHH
Confidence 99988767899999999999999999999996321100011111111112499999999999999999999999999999
Q ss_pred HHHHhccccCcCccccccccccccCccccccccccCcccccCCCCCchhhhhcHHHHHHHHHHHHHHhhCCCccccccCc
Q 001586 577 IHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNA 656 (1049)
Q Consensus 577 l~~l~~~d~~~~~~~i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~~G~~~~i~el~~~la~l~G~~~~~l~~~s 656 (1049)
|++|++||.+++++|+++||||||+|+.+++++++|++|++||||||.+++||++|+++|+++|||++||||.+++++++
T Consensus 475 ~~~L~~kn~~~~~~fi~lGsctmk~na~v~~l~~s~~ef~t~hPyqPe~~sqG~lq~i~elq~~l~eltGmd~~Sl~p~a 554 (939)
T TIGR00461 475 LHRLESKDLALNNSMIPLGSCTMKLNATAEMMPITWPEFSNIHPFQPSNQVEGYQELIAQLEKWLCSITGFDAISLQPNS 554 (939)
T ss_pred HHHHHhcCCCccccCCCCccCCCccCHHHHHHHhcchhhcCcCCCCchHHhHHHHHHHHHHHHHHHHHHCCCCcccCCch
Confidence 99999999999999999999999999999999999999999999999669999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCEEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEE
Q 001586 657 GAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMV 736 (1049)
Q Consensus 657 Ga~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~Vv~V~~d~~g~iD~~~L~~~i~~~~~~taaV~i 736 (1049)
||+||+++++++|.|++++|+.+|++|++|.++||+||+++++.|++|+.|++|++|.+|+++|++++++++++|++||+
T Consensus 555 GA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgtnPasa~~~G~~Vv~V~~d~~G~iDle~L~~~i~~~~~~taaV~i 634 (939)
T TIGR00461 555 GAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGTNPASAAMAGMQVVPVNCDQDGNIDLVDLKNKAEQHGDELAAVMV 634 (939)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcCHHHHHHCCCEEEEeccCCCCCcCHHHHHHHHhhcCCceEEEEE
Confidence 99999999999999999999878899999999999999999999999999999999999999999999977789999999
Q ss_pred EcCCccccccccHHHHHHHHHHcCCEEEEeccccccccCcCCCCccCCcEEEeCCCcccccCCCCCCCceeEEEEccccc
Q 001586 737 TYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLA 816 (1049)
Q Consensus 737 t~Pn~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~Pg~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~ 816 (1049)
++||++|+++++|++|+++||++|++++||+||+++++++.+|+++|+|++++|.||+|++|||+||||+|++++++++.
T Consensus 635 T~pst~G~~e~~I~eI~~iah~~G~~v~VDgAq~~al~~l~~Pg~~GaDi~~~s~HKtf~~P~G~GGPg~G~i~vr~~L~ 714 (939)
T TIGR00461 635 TYPSTHGVFEPTIQHACDIVHSFGGQVYLDGANMNAQVGLTSPGDLGADVCHLNLHKTFCIPHGGGGPGMGPIGVKSHLI 714 (939)
T ss_pred EeCCcCceecccHHHHHHHHHHcCCEEEEEecChhhCCCCCCccccCCCEEEecCCccCCCCCCCCCCCeEEEEEhhhch
Confidence 99999999996699999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhccCCeeecc
Q 001586 817 PFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRG 896 (1049)
Q Consensus 817 ~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~~~v~~~g 896 (1049)
+++||+.++.+.+. .+++...+.+++.++|++++++++|+||++||.+|+++.++.++++|+||+++|+++++++|++
T Consensus 715 ~~lPg~~v~~t~d~--~greq~Iga~s~~~~g~a~~~l~a~~yi~~lG~~GL~~~a~~ailnAnYl~~rL~~~~~~l~~~ 792 (939)
T TIGR00461 715 PFLPKHDVVSMITG--IGGSKSIGSVSAAPYGSASILPISWMYIKMMGNEGLPKASVVAILNANYMATRLKDHYPILFVG 792 (939)
T ss_pred hhcCCCcccccccC--CCCccccccccccccCcHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHhhccCcccccC
Confidence 99999987664321 1233333445555678999999999999999999999999999999999999999999999977
Q ss_pred CCCceeeEEEEeccCccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEccCCCCHHHHHHHHHHHHHHHHHHHHhh
Q 001586 897 VNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIE 976 (1049)
Q Consensus 897 ~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~eeid~fv~aL~~i~~~i~~i~ 976 (1049)
..++++|||+++++++++..|++..+|+|+|.|+||++++++||+.++++|+|||.+|++|||+|+++|++|.+++++|+
T Consensus 793 ~~~~~~hEfv~~~~~~~~~~g~~~~dIakrL~d~G~hapt~~~pv~g~lmiepTE~eskeelD~f~~al~~I~~e~~~~~ 872 (939)
T TIGR00461 793 TLKHVAHECILDLRPLKAKTGIEAIDVAKRLQDYGFHAPTLSFPVPGTLMVEPTESESLEELDRFCDAMIAIKEEINALV 872 (939)
T ss_pred CCCceeEEEEEeccchhhhcCCCHHHHHHHHHhCCeeccccCCccCCeEEEEeeccCCHHHHHHHHHHHHHHHHHHHHhh
Confidence 66689999999998777777889999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCcccccCccccccchhhHHHHHhHHHhhccCCCcc------ccCchhhhhhhcccCCC
Q 001586 977 NGKADIHNNVLKVTCLFLHHGYFFSYIVKEINICISSSPWNQ------SLFMKPYVYYLKFGNAG 1035 (1049)
Q Consensus 977 ~g~~~~~~~~l~~~ph~~~~~~~~~~~~~~~~~~~~~~~w~~------~~~~~~~~~~~~~~~~~ 1035 (1049)
+|++++++|+||++||++.+ ++ .++|+| ||||+||+|++|||..=
T Consensus 873 ~g~~~~~~~~l~~ap~~~~~-------------~~-~~~w~~~y~r~~a~~p~~~~~~~k~wp~v 923 (939)
T TIGR00461 873 AGQPKGQDNPLKNAPHSLQS-------------LI-TSEWWHPYSREEAAYPAPFLRYNKFWPTV 923 (939)
T ss_pred cCCCCCCcchHhhCCCCHHH-------------hh-cCCCCCCcChhhccCCCcccccCCcCCCc
Confidence 99999999999999999965 44 678997 79999999999999753
No 4
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=100.00 E-value=3.9e-185 Score=1702.62 Aligned_cols=929 Identities=85% Similarity=1.317 Sum_probs=853.9
Q ss_pred CCCCccccccCCCCCHHHHHHHHHHhCCCCHHHhhhccCCcccccCCCCCCCCCCCCCHHHHHHHHHHHhcCCCcccccc
Q 001586 92 LKPSDTFARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSIRIDSMKFSKFDEGLTESQMIEHMQKLASMNKVYKSFI 171 (1049)
Q Consensus 92 ~~~~~~f~~~~~~~~~~~~~~ml~~~g~~~~~~l~~~~ip~~~~~~~~~lp~~~~~~sE~e~~~~~~~la~~n~~~~~~l 171 (1049)
+.+.|+|.+||||||++|+++||++||++|+||||+++||++|++++++||.+.+++||.|+++|+++||.+|+.+.||+
T Consensus 29 ~~~~~~f~~r~i~~~~~~~~~ML~~ig~~s~d~l~~~~iP~~i~~~~l~lp~~~~~~sE~e~~~~~~~la~kN~~~~~fi 108 (993)
T PLN02414 29 LKPSDTFPRRHNSATPEEQKAMAEYCGFDSLDALIDATVPKSIRLDSMKLSKYDEGLTESQMLEHMKSLASKNKVFKSYI 108 (993)
T ss_pred cccccchhhccCCcCHHHHHHHHHhcCccCHHHHhhccCCHHHhcCCCCCCCCCCCCCHHHHHHHHHHHHhcCCcccccc
Confidence 33467899999999999999999999999999999888999995457898633368999999999999999999999999
Q ss_pred CCCCCCCCCcHHHHHHHHhCCccccccCCChhhHhhhHHHHHHHHHHHHHHHhCCCCcceEeccchHHHHHHHHHHhhhc
Q 001586 172 GMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQ 251 (1049)
Q Consensus 172 G~g~y~~~~p~~i~~~~~~~~~~~t~ytpyq~e~sqg~le~l~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a~~~~ 251 (1049)
|+|+|+|++|++|.++++++++|||+|||||||+|||+||+|+|||+|||+||||+++|+||+|++|+++|+++|+.++.
T Consensus 109 G~G~y~~~~P~~v~~~i~~~~~~~TaytPYqaEisQG~lqal~~~Qt~ia~LtG~~~anaSL~d~aTAaaea~~~a~~~~ 188 (993)
T PLN02414 109 GMGYYNTHVPPVILRNILENPGWYTQYTPYQAEIAQGRLESLLNYQTMITDLTGLPMSNASLLDEGTAAAEAMAMCNNIL 188 (993)
T ss_pred CCCCCCccCCHHHHHHHHhChHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHhCCChhhEeecCChHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998876
Q ss_pred cCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCcchhhccCCCEeEEEEEcCCCCeeeccHHHHHHHHHhCCcEEEE
Q 001586 252 KGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKDIDYKSGDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVM 331 (1049)
Q Consensus 252 ~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~~~~l~~l~~~t~~V~v~~pn~~G~i~di~~I~~~ah~~galliV 331 (1049)
++++++|||++.+||+++.+|++++++.|++++.++.++....++++.++++|+||++|.+.|+++|+++||++|++++|
T Consensus 189 ~g~~~~VlVs~~~hP~~~~v~~t~a~~~GieV~~v~~~~~~~~~~~v~~vlvq~P~~~G~v~dv~~I~~~ah~~GaL~iV 268 (993)
T PLN02414 189 KGKKKKFLIASNCHPQTIDVCQTRADGLGLEVVVADEKDFDYSSGDVCGVLVQYPATDGEVLDYAEFVKNAHANGVKVVM 268 (993)
T ss_pred cCCCCEEEEcCccCHhHHHHHHHhhhhcCCEEEEecchhhccccCceEEEEEecCCCCeEEcCHHHHHHHHHHcCCEEEE
Confidence 55678999999999999999999999999999999976532235578899999999999999999999999999999999
Q ss_pred EeccccccCCCCCCcccceEEEecCccccccCCCCCCceEEEEEchhHHhcCCCceeeeeecCCCCcceeeecccccccc
Q 001586 332 ATDLLALTILKPPGELGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHI 411 (1049)
Q Consensus 332 ~a~~~alg~l~~p~~~GaDivvgs~k~lg~P~~~GGP~~G~l~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreq~i 411 (1049)
++|+++++.+++|+++||||+++++|+|++|+||||||+|||+|++++.|++|||++|+++|.+|+++|+++||||||||
T Consensus 269 aad~lal~~l~~pge~GADi~vgsgqKwg~P~G~GGP~aGflavr~~~~r~~PgriVG~s~d~~g~~~~~l~LqtReqhi 348 (993)
T PLN02414 269 ATDLLALTMLKPPGEWGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRLMPGRIIGVSVDSSGKPALRMAMQTREQHI 348 (993)
T ss_pred EECHHHhcCCCCHhhccCcEEEECCCccccCCCCCCCCeeEEEECHHHHhhCCCcccCcccCCCCCcccccccccccchh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCccchhHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEcCCCCcceEEEecCCHHHHHHH
Q 001586 412 RRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASA 491 (1049)
Q Consensus 412 rrekaTsni~t~~~l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~g~~~v~~~~~~~~v~i~~~~~~~v~~~ 491 (1049)
|||||||||||+|+++++++++|+.+||++|+++++++++.+++|++++|.+.| +++..+++|++|+|.++...++.++
T Consensus 349 RrEkaTsNict~qaL~A~la~~y~~~~g~~Gl~~Ia~ri~~la~~l~~~L~~~G-~~~~~~~~f~~vt~~~~~~~~v~~~ 427 (993)
T PLN02414 349 RRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGVFAAGLKKLG-FQVQSLPFFDTVKVKCSDADAIADA 427 (993)
T ss_pred hhcccccchhHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhhcC-CccCCCCCcCeEEEecCCHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999887 9988778899999998767889999
Q ss_pred HHHcCCeeeeecCCeEEEEeccCCCHHHHHHHHHHHhCCCCCCcCHHhhhhhhhccCCCCccCCCCCCCCcccCCCCCHH
Q 001586 492 AYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEH 571 (1049)
Q Consensus 492 L~~~gI~~~~~~~~~vris~~~~~t~edid~lv~aL~~~~~~~~~~~~l~~~~~~~ip~~~~~~~~~~~~p~~~~~~se~ 571 (1049)
|.++||+++....+.+|+|+||+||++|||+|+++|..........+.+.....+.||+.++|++++++||+|++++||+
T Consensus 428 L~~~gI~l~~~~~~~lrvs~~e~~T~edId~L~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~~l~~p~f~~~~se~ 507 (993)
T PLN02414 428 AAKVGINLRVVDANTVTVSFDETTTLEDVDKLFKVFAGGKPVPFTAESLAPEVDSSIPSSLARESPYLTHPIFNQYHSEH 507 (993)
T ss_pred HHHCCCeeEEecCCeEEEEeeccCCHHHHHHHHHHHcccccccchhhhhhhhhcccCchhhhccCccccCcccccccCHH
Confidence 99999999988778999999999999999999999974311000011111111125999999999999999999999999
Q ss_pred HHHHHHHHHhccccCcCccccccccccccCccccccccccCcccccCCCCCchhhhhcHHHHHHHHHHHHHHhhCCCccc
Q 001586 572 ELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFS 651 (1049)
Q Consensus 572 e~~~~l~~l~~~d~~~~~~~i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~~G~~~~i~el~~~la~l~G~~~~~ 651 (1049)
||+||+++|++||++++++||||||||||+|+.+++.+++|++|...|||+|.++.||+++++.++++++++++|++.++
T Consensus 508 ~~~r~~~~l~~~~~~~~~~~~plgsctmk~n~~~~~~~~~~~~~~~~hp~~p~~~~~g~~~~~~~~r~~la~i~g~~~v~ 587 (993)
T PLN02414 508 ELLRYLHRLQNKDLSLVHSMIPLGSCTMKLNATTEMMPVTWPEFANIHPFAPVDQAQGYQEMFEDLGDLLCEITGFDSFS 587 (993)
T ss_pred HHHHHHHHHhhcccccccCCccCcccccccCchhhhhhhcCcchhhcCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCEEEEEcCCCCCCCCHHHHHHHHHhcCCCe
Q 001586 652 LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNL 731 (1049)
Q Consensus 652 l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~Vv~V~~d~~g~iD~~~L~~~i~~~~~~t 731 (1049)
|++|+|++||++++++++.|++.+|+.+|++||+|.++|++|++.+.+.|++|+.||+|++|.+|+++|+++++++.++|
T Consensus 588 f~pnaga~ge~a~~~vi~~~~~~~Gd~~r~~vli~~~aH~sn~a~a~~~G~~vv~v~~d~~G~vDle~L~~~i~~~~~~t 667 (993)
T PLN02414 588 LQPNAGAAGEYAGLMVIRAYHLSRGDHHRNVCIIPVSAHGTNPASAAMCGMKIVVVGTDAKGNINIEELRKAAEAHKDNL 667 (993)
T ss_pred EcCCCcHHHHHHHHHHHHHHHhccCCCCCCEEEeCCCcCccCHHHHHHCCCEEEEeccCCCCCcCHHHHHHHHhccCCCe
Confidence 99999999999999999999988787678899999999999999999999999999999999999999999999776799
Q ss_pred EEEEEEcCCccccccccHHHHHHHHHHcCCEEEEeccccccccCcCCCCccCCcEEEeCCCcccccCCCCCCCceeEEEE
Q 001586 732 STLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGV 811 (1049)
Q Consensus 732 aaV~it~Pn~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~Pg~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~ 811 (1049)
++||+++||++|.+++||++|+++||++|++|+||+||+++++++..|+++|+|++++|.||||+.|+|+||||+|++++
T Consensus 668 a~V~vt~pSn~gg~e~~I~eI~~iah~~Galv~vDgAq~~a~~~l~~p~~~GaD~~~~s~HK~f~~P~G~GGPg~G~l~~ 747 (993)
T PLN02414 668 AALMVTYPSTHGVYEEGIDEICDIIHDNGGQVYMDGANMNAQVGLTSPGFIGADVCHLNLHKTFCIPHGGGGPGMGPIGV 747 (993)
T ss_pred EEEEEECCCccccccchHHHHHHHHHHcCCEEEEEecCHHhccCcCCccccCCCEEEecCCccCCcCcccCCCCeeeEEE
Confidence 99999999987777658999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhccCC
Q 001586 812 KKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYP 891 (1049)
Q Consensus 812 ~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~~~ 891 (1049)
++++.+++||+.++.+....++.....++.++++++|+++++++||+||.+||.+|+++.+++++.+|+|++++|++.++
T Consensus 748 ~~~L~p~lPg~~v~~~~~~~~r~~~s~iGt~~~a~~g~al~l~~A~~yi~~lG~~Gl~~~a~~a~~nAnYl~~rL~~~~~ 827 (993)
T PLN02414 748 KKHLAPFLPSHPVVPTGGIPRPEKTQPLGTISAAPWGSALILPISYTYIAMMGSEGLTDASKIAILNANYMAKRLEGHYP 827 (993)
T ss_pred chhhcccCCCCccccCCCcccccCCCCcCCccchhhhhHHHHHHHHHHHHHHCHhHHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 99999999999776533111111111233444568899999999999999999999999999999999999999998888
Q ss_pred eeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEccCCCCHHHHHHHHHHHHHHHHH
Q 001586 892 ILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREE 971 (1049)
Q Consensus 892 v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~eeid~fv~aL~~i~~~ 971 (1049)
+.+.+++++++|||+++++.+++..|+++.+|+++|.++||++++++||+.+++||||||++|++|||+|+++|+.|+.|
T Consensus 828 ~~~~~~~~~~~hEfv~~~~~l~~~~g~~~~di~krL~d~Gihapt~~~pv~~~lmiepTE~~skeelDrf~~al~~i~~e 907 (993)
T PLN02414 828 VLFRGKNGTCAHEFIIDLRPFKNTAGIEPEDVAKRLMDYGFHAPTMSWPVPGTLMIEPTESESKAELDRFCDALISIREE 907 (993)
T ss_pred ccccCCCCCeeeeEEEeccccccccCCCHHHHHHHHHHcCcEEeeeccccCCEEEEEeeeeCCHHHHHHHHHHHHHHHHH
Confidence 88877667899999999987766667889999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCCCCCcccccCccccccchhhHHHHHhHHHhhccCCCcc------ccCchhhhhhhcccCCC
Q 001586 972 IAQIENGKADIHNNVLKVTCLFLHHGYFFSYIVKEINICISSSPWNQ------SLFMKPYVYYLKFGNAG 1035 (1049)
Q Consensus 972 i~~i~~g~~~~~~~~l~~~ph~~~~~~~~~~~~~~~~~~~~~~~w~~------~~~~~~~~~~~~~~~~~ 1035 (1049)
+++|++|++++++++||++||++.+ ++ .++|+| ||||+||+|++|||-.=
T Consensus 908 ~~~~~~g~~~~~~~~l~~ap~~~~~-------------~~-~~~w~~~y~r~~a~~p~~~~~~~k~~~~v 963 (993)
T PLN02414 908 IADIENGKADRENNVLKGAPHPPSL-------------LM-ADKWDKPYSREYAAFPAPWVRASKFWPTT 963 (993)
T ss_pred HHHHhcCCCCCCCchhhcCCCChHH-------------hh-cCCCCCCcChhhccCCCcccccCccCCCc
Confidence 9999999999999999999999965 54 678997 79999999999999753
No 5
>PRK05367 glycine dehydrogenase; Provisional
Probab=100.00 E-value=2.6e-180 Score=1670.69 Aligned_cols=914 Identities=60% Similarity=1.017 Sum_probs=850.7
Q ss_pred CCCccccccCCCCCHHHHHHHHHHhCCCCHHHhhhccCCccc-ccCCCCCCCCCCCCCHHHHHHHHHHHhcCCCcccccc
Q 001586 93 KPSDTFARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSI-RIDSMKFSKFDEGLTESQMIEHMQKLASMNKVYKSFI 171 (1049)
Q Consensus 93 ~~~~~f~~~~~~~~~~~~~~ml~~~g~~~~~~l~~~~ip~~~-~~~~~~lp~~~~~~sE~e~~~~~~~la~~n~~~~~~l 171 (1049)
.+.|+|.+||||||++|+++||++||++|+||||+++||++| ++++++|| +++||.|+++|+++||+||+.+++|+
T Consensus 5 ~~~~~~~~~~i~~~~~~~~~ml~~~g~~s~~~l~~~~iP~~i~~~~~l~lp---~~~sE~e~~~~~~~la~~N~~~~~~i 81 (954)
T PRK05367 5 ENSDAFARRHIGPSAADQQAMLAALGADSLDALIDQAVPASIRLAEPLDLP---AALSEAEALAELRAIASKNKVFRSYI 81 (954)
T ss_pred cccccccccCCCcCHHHHHHHHHhcCCCCHHHHhhhhCCHHHhcCCCCCCC---CCCCHHHHHHHHHHHHhcCCCCCccc
Confidence 446899999999999999999999999999999999999999 88889997 78999999999999999999999999
Q ss_pred CCCCCCCCCcHHHHHHHHhCCccccccCCChhhHhhhHHHHHHHHHHHHHHHhCCCCcceEeccchHHHHHHHHHHhhhc
Q 001586 172 GMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQ 251 (1049)
Q Consensus 172 G~g~y~~~~p~~i~~~~~~~~~~~t~ytpyq~e~sqg~le~l~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a~~~~ 251 (1049)
|+|||+|++|++|+|++++||+|||+|||||||+|||+||+++|||+|+|+||||+++|+||+|++|+++|+++|++++.
T Consensus 82 g~G~y~~~~P~vi~~~i~~~~~~~t~ytPyQ~EisQG~Leal~~~Qt~la~LtG~~~anaSl~d~aTAa~ea~~~a~~~~ 161 (954)
T PRK05367 82 GQGYYGTHTPPVILRNILENPAWYTAYTPYQPEISQGRLEALLNFQTMVADLTGLEIANASLLDEATAAAEAMALAKRVS 161 (954)
T ss_pred CCCCCCCcCcHHHHHHHHhCcchhhccCCCChHHHHHHHHHHHHHHHHHHHHHCCChhhccccccHHHHHHHHHHhhhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998876
Q ss_pred cCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCcch-hhccCCCEeEEEEEcCCCCeeeccHHHHHHHHHhCCcEEE
Q 001586 252 KGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKD-IDYKSGDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVV 330 (1049)
Q Consensus 252 ~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~~~~-l~~l~~~t~~V~v~~pn~~G~i~di~~I~~~ah~~galli 330 (1049)
++++++|||++.+||+++.+|+++++..|+++++++.++ ++ ++++.+|++|+||++|.+.|+++|+++||++|++++
T Consensus 162 ~~~~~~vlv~~~~hP~~~~v~~t~a~~~G~ev~~~~~~~d~~--~~~~~~vlvq~p~~~G~i~d~~~i~~~ah~~Gal~~ 239 (954)
T PRK05367 162 KSKSNRFFVDDDVHPQTLDVLRTRAEPLGIEVVVGDAAKALD--HDDVFGVLLQYPGTSGEVRDYTALIAAAHARGALVA 239 (954)
T ss_pred cCCCCEEEEcCccCHHHHHHHHHHHHhCCCEEEEecCccCCC--cccEEEEEEecCCCCeeeccHHHHHHHHHHcCCEEE
Confidence 334689999999999999999999999999999998753 22 457899999999999999999999999999999999
Q ss_pred EEeccccccCCCCCCcccceEEEecCccccccCCCCCCceEEEEEchhHHhcCCCceeeeeecCCCCcceeeeccccccc
Q 001586 331 MATDLLALTILKPPGELGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQH 410 (1049)
Q Consensus 331 V~a~~~alg~l~~p~~~GaDivvgs~k~lg~P~~~GGP~~G~l~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreq~ 410 (1049)
|++++++++++++|+++||||+++++|+||+|+||||||+|||+|+++++|+||||++||++|.+|+++|+|+|||||||
T Consensus 240 vda~~~Al~~l~~pge~GaDi~vgs~qkfg~P~g~GGP~aGflavr~~~~r~lpgrivG~s~d~~g~~~~~lalqtReqh 319 (954)
T PRK05367 240 VAADLLALTLLTPPGEMGADIAVGSAQRFGVPMGFGGPHAAYFAVRDAYKRSMPGRIVGVSVDAAGNPALRLALQTREQH 319 (954)
T ss_pred EEehhhhccCCCChhhcCCCEEEeeCcccCCCCCCCCCCEEEEEECHHHHhhCCCCeeeeecccCCCccccccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCccchhHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEcCCCCcceEEEecCC-HHHHH
Q 001586 411 IRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD-AHAIA 489 (1049)
Q Consensus 411 irrekaTsni~t~~~l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~g~~~v~~~~~~~~v~i~~~~-~~~v~ 489 (1049)
||||||||||||+|+++++++++|+.|||++|+++|+++++.+++||+++|++.| +++..+.+|++|+++.+. +.+|.
T Consensus 320 iRrekaTsNict~qaL~a~~a~~y~~~~g~~Gl~~Ia~~~~~la~~l~~~L~~~G-~~~~~~~~f~~~~~~~~~~~~~i~ 398 (954)
T PRK05367 320 IRREKATSNICTAQVLLAVMASMYAVYHGPEGLKAIARRVHRLAAILAAGLRALG-LEVVHDSFFDTLTVEVGGDAAAVL 398 (954)
T ss_pred ccccccccccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhcC-cccCCCCCCCeEEEeCCCCHHHHH
Confidence 9999999999999999999999999999999999999999999999999998877 998877889999998864 88999
Q ss_pred HHHHHcCCeeeeecCCeEEEEeccCCCHHHHHHHHHHHhCCCCCCcCHHhhhhhh----hccCCCCccCCCCCCCCcccC
Q 001586 490 SAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEV----ETAIPSGLTRESPYLTHPVFN 565 (1049)
Q Consensus 490 ~~L~~~gI~~~~~~~~~vris~~~~~t~edid~lv~aL~~~~~~~~~~~~l~~~~----~~~ip~~~~~~~~~~~~p~~~ 565 (1049)
++|.++||+++..+++.+|+|+||++|++|||+|+++|+.... ..+.+.... ...||+.++|+++++++|+|+
T Consensus 399 ~~l~~~gi~~~~~~~~~l~is~~e~~t~~did~l~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~f~ 475 (954)
T PRK05367 399 ARALAAGINLRRVDDDHVGISLDETTTREDLAALLAVFGGAAL---DVDALDADVADASASALPAALLRTSAYLTHPVFN 475 (954)
T ss_pred HHHHHCCceeccccCCEEEEEecccCCHHHHHHHHHHHccccc---chhhhhhhhcccccccCCHHHhcCCcccCCcccC
Confidence 9999999999887778999999999999999999999974311 111111001 125999999999999999999
Q ss_pred CCCCHHHHHHHHHHHhccccCcCccccccccccccCccccccccccCcccccCCCCCchhhhhcHHHHHHHHHHHHHHhh
Q 001586 566 KYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTIT 645 (1049)
Q Consensus 566 ~~~se~e~~~~l~~l~~~d~~~~~~~i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~~G~~~~i~el~~~la~l~ 645 (1049)
+++||.||+|||++|++||.+++++||+||||||++|+.+++.+++|++|++||||||.|++||+++++.|+++|++++|
T Consensus 476 ~~~sE~e~~r~~~~l~~kn~~~~~~~i~lGsct~~~~p~~~~~~~~~~~f~~~hP~qp~e~~qG~l~~i~e~q~~l~elt 555 (954)
T PRK05367 476 RYHSETEMMRYLRRLEDKDLALDRSMIPLGSCTMKLNAAAEMIPITWPEFANLHPFAPAEQAAGYRELIDQLEAWLAEIT 555 (954)
T ss_pred CCCCHHHHHHHHHHHHhcCcCcccceeeCCcCCCcCCHHHHHHHHhCccccccCCCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCEEEEEcCCCCCCCCHHHHHHHHH
Q 001586 646 GFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAE 725 (1049)
Q Consensus 646 G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~Vv~V~~d~~g~iD~~~L~~~i~ 725 (1049)
|++.+++++++|++||+++++++|.|+.++|+.+|++||+|.++|++||+++.+.|++|+.|+++++|.+|+++|+++++
T Consensus 556 G~d~~sl~~~~ga~ge~agL~a~r~~~~~~G~~~r~~vlis~~aH~snp~sa~~~G~~vv~v~~d~~G~iD~~~L~~~i~ 635 (954)
T PRK05367 556 GYDAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRDVCLIPSSAHGTNPASAVMAGMKVVVVACDENGNIDLDDLRAKAE 635 (954)
T ss_pred CCCCEEECccHHHHHHHHHHHHHHHHhhccCCCCCCEEEEEchhhhhhHHHHHHCCCEEEEECCCCCCCcCHHHHHHHHh
Confidence 99998999999999999999999999888887678899999999999999999999999999999899999999999998
Q ss_pred hcCCCeEEEEEEcCCccccccccHHHHHHHHHHcCCEEEEeccccccccCcCCCCccCCcEEEeCCCcccccCCCCCCCc
Q 001586 726 ANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHLNLHKTFCIPHGGGGPG 805 (1049)
Q Consensus 726 ~~~~~taaV~it~Pn~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~Pg~~GaDi~~~s~hK~f~~P~g~GGPg 805 (1049)
++++++++||+++|+++|++++||++|+++||++|+++|||+||++++.++.+|+++|+|++++|+||||++|||+||||
T Consensus 636 ~~~~~la~V~it~pst~G~~e~~I~eI~~i~h~~G~~v~VDgA~~~al~~l~~pg~~GADi~~~s~HK~f~~P~G~GGPg 715 (954)
T PRK05367 636 EHADNLAAIMITYPSTHGVFEETIREICEIVHEHGGQVYLDGANMNAQVGLARPGDIGADVSHLNLHKTFCIPHGGGGPG 715 (954)
T ss_pred ccCCCeEEEEEEcCCCCeeecCCHHHHHHHHHHcCCEEEEECcChhhccCCCChhhcCCCEEEecCcccCCCCcCCCCCc
Confidence 66568999999999999998658999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHH
Q 001586 806 MGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKR 885 (1049)
Q Consensus 806 ~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~ 885 (1049)
+|++++++++.+++||+.++.+. ...+.+.++++++|++++++++|+|+.++|.+|+++++++++.+|+|++++
T Consensus 716 ~G~l~vr~~l~p~lpg~~v~~~~------~~~~~g~v~ta~~g~al~~~~a~~yi~~~G~~Glr~~a~~~~~~A~Yl~~~ 789 (954)
T PRK05367 716 VGPIGVKAHLAPFLPGHPVQIAG------GETGIGAVSAAPFGSASILPISWMYIRMMGAEGLRQATEVAILNANYIAKR 789 (954)
T ss_pred eEEEeecccccccCCCCccCcCC------CCCCcCcchhHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998765422 123346777778999999999999999999999999999999999999999
Q ss_pred HhccCCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEccCCCCHHHHHHHHHHH
Q 001586 886 LEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDAL 965 (1049)
Q Consensus 886 L~~~~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~eeid~fv~aL 965 (1049)
|++.++++|.++.++++|||+++++++++..+++..+|+|+|.++||++++++||+.+++||+|||++|++|||+|+++|
T Consensus 790 L~~~~~~~~~~~~~~~~~e~i~~~~~~~~~~g~~~~di~krL~d~G~~~~t~~~pv~~~l~i~ptE~~s~~elDr~~~al 869 (954)
T PRK05367 790 LKDHYPVLYTGANGRVAHECILDLRPLKESTGITVDDIAKRLIDYGFHAPTMSFPVAGTLMVEPTESESKAELDRFCDAM 869 (954)
T ss_pred HHhhcCccccCCCCCcccceEEEeecccccCCCCHHHHHHHHHHCCCeEeecCCccCCEEEEEeeecCCHHHHHHHHHHH
Confidence 99888998877667899999999977766557788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcCCCCCCCcccccCccccccchhhHHHHHhHHHhhccCCCcc------ccCchhhhhhhcccCCC
Q 001586 966 ISIREEIAQIENGKADIHNNVLKVTCLFLHHGYFFSYIVKEINICISSSPWNQ------SLFMKPYVYYLKFGNAG 1035 (1049)
Q Consensus 966 ~~i~~~i~~i~~g~~~~~~~~l~~~ph~~~~~~~~~~~~~~~~~~~~~~~w~~------~~~~~~~~~~~~~~~~~ 1035 (1049)
++|..++++|++|++++++|+||++||++.+ ++ .++|+| |+||+||+|++|||..=
T Consensus 870 ~~i~~e~~~~~~~~~~~~~~~~~~ap~~~~~-------------~~-~~~w~~~y~r~~~~~p~~~~~~~k~~~~~ 931 (954)
T PRK05367 870 IAIRAEIDEVEAGEWPAEDNPLKNAPHTAAD-------------LV-ADEWDHPYSREQAAFPLPSLRANKYWPPV 931 (954)
T ss_pred HHHHHHHHHhhcCCCCCCcchhhhCCCCHHH-------------hc-cCCCCCCCCHHHhcCCCcccccCCcCCCc
Confidence 9999999999999999999999999999965 44 678997 69999999999999753
No 6
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=100.00 E-value=6.4e-116 Score=961.10 Aligned_cols=435 Identities=55% Similarity=0.885 Sum_probs=411.0
Q ss_pred CCCccccccCCCCCHHHHHHHHHHhCCCCHHHhhhccCCccc-cc--CCCCCCCCCCCCCHHHHHHHHHHHhcCCCcccc
Q 001586 93 KPSDTFARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSI-RI--DSMKFSKFDEGLTESQMIEHMQKLASMNKVYKS 169 (1049)
Q Consensus 93 ~~~~~f~~~~~~~~~~~~~~ml~~~g~~~~~~l~~~~ip~~~-~~--~~~~lp~~~~~~sE~e~~~~~~~la~~n~~~~~ 169 (1049)
.+.|.|..|||+|+++|+++||++||++|+||||+++||++| .+ ..+.+ ++++||.|+++++++++++|+.+.+
T Consensus 2 ~~~~~f~~rh~~P~~~d~~~ML~~iG~~Sld~L~~~~IP~~Ir~~~~~~~~~---~~~~sE~e~l~~l~~ia~kN~~~~s 78 (450)
T COG0403 2 EPLDAFMARHIGPSSADQQEMLAAIGVSSLDELFSQDIPPSIRKKLDTLLPL---PKPLSEYEALAELKEIASKNKVFTS 78 (450)
T ss_pred CccchhhhcCCCCChHHHHHHHHHcCCCCHHHHhhccCCHHHHhcccccCCC---CCCCCHHHHHHHHHHHHhcCchhhh
Confidence 467899999999999999999999999999999998899999 54 22334 4789999999999999999999999
Q ss_pred ccCCCCCCCCCcHHHHHHHHhCCccccccCCChhhHhhhHHHHHHHHHHHHHHHhCCCCcceEeccchHHHHHHHHHHhh
Q 001586 170 FIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNN 249 (1049)
Q Consensus 170 ~lG~g~y~~~~p~~i~~~~~~~~~~~t~ytpyq~e~sqg~le~l~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a~~ 249 (1049)
|||+|||+|++|++|+||+++||+|||+|||||||||||+||+|||||+++|||||||++|+||||++||++|||.||.+
T Consensus 79 fiG~GyY~~~~P~vI~rnile~pewyTaYTPYQpEISQGrLqaLfefQtlv~dLTGm~VANASm~DeaTAaAEAm~ma~r 158 (450)
T COG0403 79 FIGAGYYDTYTPPVILRNILENPEWYTAYTPYQPEISQGRLEALFEFQTLVADLTGLDVANASMLDEATAAAEAMLMAKR 158 (450)
T ss_pred hccCcccCCcCcHHHHHHhhcCccccccCCCCchhhhhHHHHHHHHHHHHHHHHhCCCcccchhhhhHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCcchhhc----cCCCEeEEEEEcCCCCe-eeccHHHHHHHHHh
Q 001586 250 IQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKDIDY----KSGDVCGVLVQYPGTEG-EVLDYGDFIKNAHA 324 (1049)
Q Consensus 250 ~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~~~~l~~----l~~~t~~V~v~~pn~~G-~i~di~~I~~~ah~ 324 (1049)
.+++++++|+|++.+||+++++++||++++|++++.++.++++. .+.++.+|+|||||++| .+.|+++|.+.+|+
T Consensus 159 ~~k~k~~~~~V~~~vhpqt~~Vl~Tra~~~g~~i~~~~~~d~~~l~~~~~~~~~gv~vQyP~~~G~~~~d~~~l~~~~h~ 238 (450)
T COG0403 159 VTKKKRNKFLVPKDVHPQTLDVLRTRAEGLGIEIEVVDADDLDDLESADDGDVFGVLVQYPNTFGIVEEDLRALIEAAHS 238 (450)
T ss_pred hhcCcCceEEecCCCCHHHHHHHHhhcccCceEEEEeccchhhhhhhccccCeEEEEEecCCCCCccchhHHHHHHHHhh
Confidence 88667899999999999999999999999999999998876543 24589999999999999 66789999999999
Q ss_pred CCcEEEEEeccccccCCCCCCcccceEEEecCccccccCCCCCCceEEEEEchhHHhcCCCceeeeeecCCCCcceeeec
Q 001586 325 NGVKVVMATDLLALTILKPPGELGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAM 404 (1049)
Q Consensus 325 ~galliV~a~~~alg~l~~p~~~GaDivvgs~k~lg~P~~~GGP~~G~l~~~~~l~~~lpgrivG~s~d~~g~~~~~l~l 404 (1049)
+|++++|++|+++|+++++||+|||||+||++|+||+||||||||+|||+|+++++|+||||+||+|+|.+|+++|+|+|
T Consensus 239 ~~al~~v~aDplaL~LL~pPGe~GADIvvG~~QrfGvPmgfGGPhag~fA~~~~~~R~mPGRlVG~S~D~~G~~A~rLaL 318 (450)
T COG0403 239 AGALVIVAADPLALGLLKPPGEFGADIVVGSAQRFGVPMGFGGPHAGYFAVKDEFKRQMPGRLVGVSVDAAGKRAFRLAL 318 (450)
T ss_pred cCCEEEEEechhHhhccCCccccCCceEEecCcccCCCcCCCCcceeeeeEhHhHhhcCCCceeeeeecCCCCchhhhhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccccccCCCccchhHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHhhcCC-CeEEcCCCCcceEEEecC
Q 001586 405 QTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLG-TVEVQGLPFFDTVKVKCA 483 (1049)
Q Consensus 405 qtreq~irrekaTsni~t~~~l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~g-~~~v~~~~~~~~v~i~~~ 483 (1049)
||||||||||||||||||||+|+|++|++|++|||++||++|++|+++++.+|+++|++++ |++++.+.+|++|+++++
T Consensus 319 QTREQHIRReKATSNICTnQaLlA~~As~y~~~hGp~GLk~iA~r~~~~a~~la~~L~~~~~g~~~~~~~fFdt~~v~~~ 398 (450)
T COG0403 319 QTREQHIRREKATSNICTNQALLALAASMYAVYHGPQGLKEIAERIHRLAAYLAAGLKEIGAGVELVFDHFFDTFTVRVP 398 (450)
T ss_pred HHHHHHHhhhccchhhhHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhcCCceEeccccceeeEEEecc
Confidence 9999999999999999999999999999999999999999999999999999999999652 499987799999999998
Q ss_pred -C-HHHHHHHHHHcCCeeeeecCCeEEEEeccCCCHHHHHHHHHHHhCC
Q 001586 484 -D-AHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGG 530 (1049)
Q Consensus 484 -~-~~~v~~~L~~~gI~~~~~~~~~vris~~~~~t~edid~lv~aL~~~ 530 (1049)
. ...+.++....||+++.++.+++.+|+||++|++|||.|+++|...
T Consensus 399 ~~~~~~l~~~~~~~G~~L~~~~~~~~~ia~tEt~t~~~i~~l~~~~~~~ 447 (450)
T COG0403 399 EEVAEALLAAAIAGGINLRRVDADTVLIALTETTTKEDIDALVAAFGGV 447 (450)
T ss_pred hhHHHHHHHHHHhcCCceeeecCCceEEEeecccCHHHHHHHHHHHhhh
Confidence 4 6678888888899999999899999999999999999999999753
No 7
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=100.00 E-value=1.8e-103 Score=859.57 Aligned_cols=450 Identities=58% Similarity=0.989 Sum_probs=419.1
Q ss_pred CCCCCcccCCC-----CCHHHHHHHHHHHhccccCcCccccccccccccCccccccccccCcccccCCCCCchhhhhcHH
Q 001586 557 PYLTHPVFNKY-----HTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQ 631 (1049)
Q Consensus 557 ~~~~~p~~~~~-----~se~e~~~~l~~l~~~d~~~~~~~i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~~G~~ 631 (1049)
.+|++|+|+++ +||.||+||+.+|++||+.++++||||||||||+|+.+++.++.|++|.++|||||.++.||++
T Consensus 29 ~~L~~~~~r~~~~~Pe~SE~e~~Rh~~rLs~kn~avd~~m~PLGSCTMK~Np~~e~~~~~~p~f~~iHP~~pe~~vqG~l 108 (496)
T COG1003 29 EYLPHPVFRRYPPLPEHSETEMVRHYTRLSQKDLAVDRGMIPLGSCTMKLNPKAEMKPATWPEFANIHPFQPEEQVQGYL 108 (496)
T ss_pred hhcCcHHhhcCCCCccccHHHHHHHHHHHHhcccccccCccCCcccccccCchhhcccccccchhhcCCCCChHHHHHHH
Confidence 66777778777 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCEEEEEcCCC
Q 001586 632 EMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA 711 (1049)
Q Consensus 632 ~~i~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~Vv~V~~d~ 711 (1049)
+++.++|+||+++||||.+++||++||+||++++++||+||+++|+.+|++||||+||||+||++|+|.|++||.|++++
T Consensus 109 ~li~~Lq~~L~~ITG~DavsLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGTNPASAam~G~~VV~V~~~~ 188 (496)
T COG1003 109 ELIYELQEWLKEITGMDAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGTNPASAAMAGFKVVVVKCDE 188 (496)
T ss_pred HHHHHHHHHHHHhcCCceeeccCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEeeccccCCChhhHhhcCceEEEEecCC
Confidence 99999999999999999999999999999999999999999999998999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCCCeEEEEEEcCCccccccccHHHHHHHHHHcCCEEEEeccccccccCcCCCCccCCcEEEeCC
Q 001586 712 KGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHLNL 791 (1049)
Q Consensus 712 ~g~iD~~~L~~~i~~~~~~taaV~it~Pn~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~Pg~~GaDi~~~s~ 791 (1049)
+|.+|++||+++++ ++++++|||||||+|+||++|.|||+++|++|++||+||||+|+++|+.+||++|+||+|+|+
T Consensus 189 ~G~VDlddLk~k~~---~~~AalMiTnPsT~GvFE~~I~ei~~ivH~~Gg~vY~DGANlNA~vG~~rPGd~G~DV~HlNL 265 (496)
T COG1003 189 NGNVDLDDLRAKAE---DNLAALMITNPSTLGVFEEDIREICEIVHEAGGQVYYDGANLNAIVGLARPGDMGFDVVHLNL 265 (496)
T ss_pred CCCccHHHHHHHhc---cceeEEEeccCcccccchhhHHHHHHHHHHcCCEEEecCcchhhhhccccccccccceEEeec
Confidence 99999999999998 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccccCCCCCCCceeEEEEcccccccCCCCc----ccc-CCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchh
Q 001586 792 HKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHP----VVS-TGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSK 866 (1049)
Q Consensus 792 hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~----vg~-t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~e 866 (1049)
|||||+|||+||||+|+|+++++|.+++|++. .+. ..+ ....+ +...++++||++++++++|+||.+||.+
T Consensus 266 HKTF~iPHGGGGPG~GPvgVk~~L~pfLP~p~~~~~~~~y~~~---~~~~~-s~g~~~a~~Gs~~il~~a~~YI~~mG~~ 341 (496)
T COG1003 266 HKTFCIPHGGGGPGAGPVGVKAHLAPFLPGPVVYHDVGEYRLD---YDGKK-SIGVSAAPYGSASILPIAWAYIRMMGAD 341 (496)
T ss_pred ccccccCCCCCCCCCCceehHhhccccCCCCcccCCCcccccc---CCCCc-cceeeccccCcchHHHHHHHHHHHHhHH
Confidence 99999999999999999999999999999843 221 111 11112 3345567999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHHHCCcccCCCCCC--CCCE
Q 001586 867 GLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWP--VPGT 944 (1049)
Q Consensus 867 Gl~~~~~~~~~~a~yL~~~L~~~~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~p--~~~~ 944 (1049)
||++.++.++.||||++++|+..|+++|.+.+ ++.||||+|.++++++.|+.+.||+|||.|+|||+||++|| |.++
T Consensus 342 GL~~ase~AvLNANYia~rL~~~y~~~y~~~~-~~~HE~ild~r~l~~~~Gv~~~DvAKrLlD~GfHaPT~~FPliV~~t 420 (496)
T COG1003 342 GLKQASEVAVLNANYIARRLKGYYPVPYTGEN-RVAHECILDARPLKKETGVRALDVAKRLLDYGFHAPTMYFPLIVAGT 420 (496)
T ss_pred HHHHHHHHHHHhHHHHHHHhhhcCccccCCCC-cceeEEEeechHhHhhcCCcHHHHHHHHHhcCCCCCcccCccccccc
Confidence 99999999999999999999999999997754 79999999999888889999999999999999999999999 8999
Q ss_pred EEEEccCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCccccccchhhHHHHHhHHHhhccCCCcc------
Q 001586 945 LMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKVTCLFLHHGYFFSYIVKEINICISSSPWNQ------ 1018 (1049)
Q Consensus 945 lri~~t~~~t~eeid~fv~aL~~i~~~i~~i~~g~~~~~~~~l~~~ph~~~~~~~~~~~~~~~~~~~~~~~w~~------ 1018 (1049)
|||+|||++|++|+|+|+++|++|++|++++..| +.+++|++++||++.+ ++ .++|++
T Consensus 421 LMIEPTEsEsk~eLDrf~dami~I~~Ea~~~~~~--~~~~~P~~~a~~r~~e-------------~~-a~~~~~p~~R~~ 484 (496)
T COG1003 421 LMIEPTESESKEELDRFIDAMIAIREEADAVPAG--PLKDNPLNTAPHRLDE-------------LL-AARWDHPYSREE 484 (496)
T ss_pred eeecCCCCCCHHHHHHHHHHHHHHHHHHHhccCC--ccccCcccCCcchHHH-------------Hh-hccCCCCeeeeh
Confidence 9999999999999999999999999999998777 5589999999999854 44 467853
Q ss_pred ccCchhhhhhhc
Q 001586 1019 SLFMKPYVYYLK 1030 (1049)
Q Consensus 1019 ~~~~~~~~~~~~ 1030 (1049)
++||+|+++.+|
T Consensus 485 ~~~p~~~~~~~k 496 (496)
T COG1003 485 AAYPLGKLRADK 496 (496)
T ss_pred ccccccccccCC
Confidence 799999998765
No 8
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=100.00 E-value=1.5e-102 Score=886.51 Aligned_cols=425 Identities=44% Similarity=0.665 Sum_probs=330.3
Q ss_pred ccCCCCCHHHHHHHHHHhCCCCHHHhhhccCCccc-ccCCCCCCCCCCCCCHHHHHHHHHHHhcCCCccccccCCCCCCC
Q 001586 100 RRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSI-RIDSMKFSKFDEGLTESQMIEHMQKLASMNKVYKSFIGMGYYNT 178 (1049)
Q Consensus 100 ~~~~~~~~~~~~~ml~~~g~~~~~~l~~~~ip~~~-~~~~~~lp~~~~~~sE~e~~~~~~~la~~n~~~~~~lG~g~y~~ 178 (1049)
+||||||++|+++||++||++|+||||++.||+++ ++++++|| +++||.|++||+++|++||..+.+|+|+|+|+|
T Consensus 1 ~ryi~~t~~~~~~ML~~iG~~sieeL~~~~IP~~i~~~~~~~lp---~~~sE~e~~r~~~~la~kN~~~~~fiG~G~y~~ 77 (429)
T PF02347_consen 1 MRYIPPTDEDIQEMLDAIGVKSIEELFDSDIPEEIRLKKPLNLP---EPLSEYELLRHLERLASKNKSYTSFIGAGSYTH 77 (429)
T ss_dssp -------HHHHHHHHHHCT-SSTGGGG-TTS-GGG-SS-------------HHHHHHHHHHHHTTS--TTS---CTTT--
T ss_pred CCCCCcCHHHHHHHHHhcCCCCHHHHhhhhCCHhhcCCCCCCCC---CCCCHHHHHHHHHHHHhcCCCCCccccccccCc
Confidence 59999999999999999999999999966799999 88899997 679999999999999999999999999999999
Q ss_pred CCcHHHHHHHHhCCccccccCCChhhHhhhHHHHHHHHHHHHHHHhCCCCcceEeccchHHHHHHHHHHhhhccCCCCEE
Q 001586 179 HVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTF 258 (1049)
Q Consensus 179 ~~p~~i~~~~~~~~~~~t~ytpyq~e~sqg~le~l~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a~~~~~~~g~~V 258 (1049)
++|++|.+++++|++|||+|||||||+|||+||+|+|||+|||+|||||++|+|+||++||++||++|+.+.+++++++|
T Consensus 78 ~~P~~i~~~i~~~~ef~TaYtPYQpEisQG~Lq~lfe~Qs~i~eLTGmdvaNaSlyd~atA~aEa~~ma~r~~~~~~~~v 157 (429)
T PF02347_consen 78 YVPAVIDRNILSRPEFYTAYTPYQPEISQGRLQALFEYQSMICELTGMDVANASLYDGATAAAEAMLMAVRATKRKRNKV 157 (429)
T ss_dssp ---HHHHH-HHCCHHCCCS-STTSGGGBHHHHHHHHHHHHHHHHHHTSSEE-SEBSSCCHHHHHHHHHHHHHHTT---EE
T ss_pred eeChhhcCccccChhhhccCCCCCcHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCChhHHHHHHHHHHHHhcccCCcEE
Confidence 99999998899999999999999999999999999999999999999999999999999999999999988875566799
Q ss_pred EEcCCCCHHHHHHHHHhhcCCCeEEEEeCcchhhc-cCCCEeEEEEEcCCCCeeeccHHHHHHHHHhCCcEEEEEecccc
Q 001586 259 IIASNCHPQTIDICITRADGFDIKVVVSDLKDIDY-KSGDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLA 337 (1049)
Q Consensus 259 lv~~~~Hps~~~~l~~~a~~~gi~v~~v~~~~l~~-l~~~t~~V~v~~pn~~G~i~di~~I~~~ah~~galliV~a~~~a 337 (1049)
+|++.+||+++.+++++++..|++++.++.++-.. .++++++|+||+||++|.++|+++|++++|++|++++|++|+++
T Consensus 158 lv~~~~hP~~~~v~~t~a~~~g~~iv~~~~~~~~~~d~~~~a~v~vq~Pn~~G~~ed~~~i~~~~h~~gal~~~~ad~~a 237 (429)
T PF02347_consen 158 LVPESLHPQTRAVLRTYAAPLGIEIVEVPLDEDGTTDDDDTAAVMVQNPNTFGVFEDIKEIADIAHAAGALVIVGADPNA 237 (429)
T ss_dssp EEETTS-CHHHHHHHHHCCHCCEEEEEE-BBTTCSB-STTEEEEEEESS-TTSB--THHHHHHHHHHTT-EEEECGGCCG
T ss_pred EEcCCcChhhHHHHHHhhhhCCeEEEEecccccCCccccCeEEEEeecCCCCceEeeHHHHHHHHHHcCCEEEEecCHHH
Confidence 99999999999999999999999999999765333 25799999999999999999999999999999999999999999
Q ss_pred ccCCCCCCcccceEEEecCccccccCCCCCCceEEEEEchhHHhcCCCceeeeeecCCCCcceeeecccccccccccccC
Q 001586 338 LTILKPPGELGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKAT 417 (1049)
Q Consensus 338 lg~l~~p~~~GaDivvgs~k~lg~P~~~GGP~~G~l~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irrekaT 417 (1049)
++++++|++|||||+||++|+||+||+|||||+|||+|+++++|+||||+||.|+|.+|+++|+|+||||||||||||||
T Consensus 238 L~~l~~Pge~GADI~vg~~Q~fg~p~~~GGP~~G~~a~~~~l~r~lPGRiVG~t~D~~G~~~~~ltLqtREQHIrReKAt 317 (429)
T PF02347_consen 238 LGGLKSPGEYGADIVVGEHQTFGIPMGFGGPGAGFFAVREDLVRQLPGRIVGQTKDADGKRAFVLTLQTREQHIRREKAT 317 (429)
T ss_dssp CCTC--GGGGT-SEEEECCTTTT---CCC-S--EEEEE-GGGGGGS-S-EEEEEEBCCCSCCEEEE-GGGTCHHHGCCST
T ss_pred HhCcCChhhcCccEEeeCCCCCcccCCCCCCCeeeEEEhhhhhhhCCCceecccccccccceeeeccccccccccccchh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccchhHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEcCCCCcceEEEecCC--HHHHHHHHHHc
Q 001586 418 SNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD--AHAIASAAYKI 495 (1049)
Q Consensus 418 sni~t~~~l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~g~~~v~~~~~~~~v~i~~~~--~~~v~~~L~~~ 495 (1049)
|||||+|+|+|++|++|+++||++||++++++++.+|+||+++|+++.++.+.+..+|++|.+..+. ..++.+++...
T Consensus 318 SNIctnqaL~A~~a~~Yl~~~G~~GL~~iA~~~~~~A~yl~~~L~~~~~~~~~~~~f~e~v~~~~~~~~~~~l~~~~~~~ 397 (429)
T PF02347_consen 318 SNICTNQALLALAAAIYLAYLGPEGLREIAERIHLNAHYLAERLKKIYGLPFDNPFFFEFVVVFSKDKEVEELLKRGIEG 397 (429)
T ss_dssp T---SS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTBECSSSSSBSSEEEEESS-HHHHHHHHTT---
T ss_pred hhhhhhHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCCCCceeeeeecCCcHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999999742444455677777776654 33455555566
Q ss_pred CCeeeeecCCeEEEEeccCCCHHHHHHHHHHH
Q 001586 496 EMNLRVVDSNTVTASFDETTTLEDVDKLFIVF 527 (1049)
Q Consensus 496 gI~~~~~~~~~vris~~~~~t~edid~lv~aL 527 (1049)
|++++..+.+++++|+||++|+||||+|+++|
T Consensus 398 gl~~~~~~~~~~li~~TE~~t~edid~lv~~f 429 (429)
T PF02347_consen 398 GLNLRYPDDGALLICVTETRTKEDIDRLVEAF 429 (429)
T ss_dssp -EEEGGG-SSEEEEE--TT--HHHHHHHHH--
T ss_pred CCCccccCCCeEEEEccCCCCHHHHHHHHhcC
Confidence 76666666779999999999999999999986
No 9
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=100.00 E-value=1.8e-65 Score=582.95 Aligned_cols=403 Identities=34% Similarity=0.528 Sum_probs=294.2
Q ss_pred CCCHHHHHHHHHHHhCCCCCCcCHHhhhhhhhccCCCCccCCCCCCCCcccCCCCCHHHHHHHHHHHhccccCcCccccc
Q 001586 514 TTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIP 593 (1049)
Q Consensus 514 ~~t~edid~lv~aL~~~~~~~~~~~~l~~~~~~~ip~~~~~~~~~~~~p~~~~~~se~e~~~~l~~l~~~d~~~~~~~i~ 593 (1049)
-+|++|++..++.++.+ |+|||+. ++||+++++++++ .+| .++||.|++||+++|++||.+ ..++++
T Consensus 5 ~~t~~~~~~ML~~iG~~-----sieeL~~---~~IP~~i~~~~~~-~lp---~~~sE~e~~r~~~~la~kN~~-~~~fiG 71 (429)
T PF02347_consen 5 PPTDEDIQEMLDAIGVK-----SIEELFD---SDIPEEIRLKKPL-NLP---EPLSEYELLRHLERLASKNKS-YTSFIG 71 (429)
T ss_dssp ---HHHHHHHHHHCT-S-----STGGGG----TTS-GGG-SS--------------HHHHHHHHHHHHTTS---TTS---
T ss_pred CcCHHHHHHHHHhcCCC-----CHHHHhh---hhCCHhhcCCCCC-CCC---CCCCHHHHHHHHHHHHhcCCC-CCcccc
Confidence 36899999999999988 8999983 4899999998875 665 579999999999999999998 678999
Q ss_pred cccccccCccccccccccCccccc-CCCCCchhhhhcHHHHHHHHHHHHHHhhCCCcc--ccccCchHHHHHHHHHHHHH
Q 001586 594 LGSCTMKLNATTEMMPVTWPSFAN-IHPFAPADQAQGYQEMFNNLGEWLCTITGFDSF--SLQPNAGAAGEYAGLMVIRA 670 (1049)
Q Consensus 594 lGs~t~~~~~~~~~~~~~~~~f~~-~~P~~p~e~~~G~~~~i~el~~~la~l~G~~~~--~l~~~sGa~ge~a~l~air~ 670 (1049)
+|+|+|++|+.+.+..+++++|++ |||||| |++||++|+++|+|+|+|+|||||.+ ++++.+||.|| +++|++|.
T Consensus 72 ~G~y~~~~P~~i~~~i~~~~ef~TaYtPYQp-EisQG~Lq~lfe~Qs~i~eLTGmdvaNaSlyd~atA~aE-a~~ma~r~ 149 (429)
T PF02347_consen 72 AGSYTHYVPAVIDRNILSRPEFYTAYTPYQP-EISQGRLQALFEYQSMICELTGMDVANASLYDGATAAAE-AMLMAVRA 149 (429)
T ss_dssp CTTT-----HHHHH-HHCCHHCCCS-STTSG-GGBHHHHHHHHHHHHHHHHHHTSSEE-SEBSSCCHHHHH-HHHHHHHH
T ss_pred ccccCceeChhhcCccccChhhhccCCCCCc-HHHHHHHHHHHHHHHHHHHhhCCCccCCCCCChhHHHHH-HHHHHHHh
Confidence 999999999999996699999987 999999 99999999999999999999999985 78999999999 88888876
Q ss_pred HHHhcCCCCCCEEEEcCCCCCccHH----HHHhcCCEEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCCcccccc
Q 001586 671 YHKARGDHHRNVCIIPVSAHGTNPA----TAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYE 746 (1049)
Q Consensus 671 y~~~~G~~~r~~VLip~saHg~~pa----~a~~~G~~Vv~V~~d~~g~iD~~~L~~~i~~~~~~taaV~it~Pn~~G~i~ 746 (1049)
.+ +++++|++|.+.|+.+.+ ++...|++++.+++++++..| + +++++||+++||++|+|+
T Consensus 150 ~~-----~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~iv~~~~~~~~~~d--------~---~~~a~v~vq~Pn~~G~~e 213 (429)
T PF02347_consen 150 TK-----RKRNKVLVPESLHPQTRAVLRTYAAPLGIEIVEVPLDEDGTTD--------D---DDTAAVMVQNPNTFGVFE 213 (429)
T ss_dssp HT-----T---EEEEETTS-CHHHHHHHHHCCHCCEEEEEE-BBTTCSB---------S---TTEEEEEEESS-TTSB--
T ss_pred cc-----cCCcEEEEcCCcChhhHHHHHHhhhhCCeEEEEecccccCCcc--------c---cCeEEEEeecCCCCceEe
Confidence 32 146799999999998887 467799999999998888887 3 899999999999999999
Q ss_pred ccHHHHHHHHHHcCCEEEEeccccccccCcCCCCccCCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCcccc
Q 001586 747 EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVS 826 (1049)
Q Consensus 747 ~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~Pg~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~ 826 (1049)
|+++|++++|++|+++++ ++|+++++++.+||++|+||++++ ||+|++||+||||++|++++++++.+++|||++|.
T Consensus 214 -d~~~i~~~~h~~gal~~~-~ad~~aL~~l~~Pge~GADI~vg~-~Q~fg~p~~~GGP~~G~~a~~~~l~r~lPGRiVG~ 290 (429)
T PF02347_consen 214 -DIKEIADIAHAAGALVIV-GADPNALGGLKSPGEYGADIVVGE-HQTFGIPMGFGGPGAGFFAVREDLVRQLPGRIVGQ 290 (429)
T ss_dssp -THHHHHHHHHHTT-EEEE-CGGCCGCCTC--GGGGT-SEEEEC-CTTTT---CCC-S--EEEEE-GGGGGGS-S-EEEE
T ss_pred -eHHHHHHHHHHcCCEEEE-ecCHHHHhCcCChhhcCccEEeeC-CCCCcccCCCCCCCeeeEEEhhhhhhhCCCceecc
Confidence 699999999999999999 999999999999999999999776 89999999999999999999999999999999987
Q ss_pred CCCC-------------CCC-CCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhccCCe
Q 001586 827 TGGI-------------PAP-EKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPI 892 (1049)
Q Consensus 827 t~~~-------------~~~-~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~~~v 892 (1049)
+.|. ++| +|+|+|+|||++ +++.+.+|++|+.++|++|+++++++++++|+|++++|++.+.+
T Consensus 291 t~D~~G~~~~~ltLqtREQHIrReKAtSNIctn---qaL~A~~a~~Yl~~~G~~GL~~iA~~~~~~A~yl~~~L~~~~~~ 367 (429)
T PF02347_consen 291 TKDADGKRAFVLTLQTREQHIRREKATSNICTN---QALLALAAAIYLAYLGPEGLREIAERIHLNAHYLAERLKKIYGL 367 (429)
T ss_dssp EEBCCCSCCEEEE-GGGTCHHHGCCSTT---SS----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTBE
T ss_pred cccccccceeeeccccccccccccchhhhhhhh---HHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 6543 222 478999999985 88888999999999999999999999999999999999987555
Q ss_pred eeccCCCceeeEEEEeccCccccCCCCHHHHHHHHHHCCcccCC-CCCCCCCEEEEEccCCCCHHHHHHHHHHH
Q 001586 893 LFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPT-MSWPVPGTLMIEPTESESKEELDRYCDAL 965 (1049)
Q Consensus 893 ~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~-~~~p~~~~lri~~t~~~t~eeid~fv~aL 965 (1049)
.+. ++++++|++.... + ..+.+ |.++++..+. ..++..++++||+||.+|++|||+|+++|
T Consensus 368 ~~~---~~~f~e~v~~~~~-------~-~~~~~-l~~~~~~~gl~~~~~~~~~~li~~TE~~t~edid~lv~~f 429 (429)
T PF02347_consen 368 PFD---NPFFFEFVVVFSK-------D-KEVEE-LLKRGIEGGLNLRYPDDGALLICVTETRTKEDIDRLVEAF 429 (429)
T ss_dssp CSS---SSSBSSEEEEESS---------HHHHH-HHHTT----EEEGGG-SSEEEEE--TT--HHHHHHHHH--
T ss_pred ccC---CCCceeeeeecCC-------c-HHHHH-HHHHHHhcCCCccccCCCeEEEEccCCCCHHHHHHHHhcC
Confidence 554 3466777776531 1 23322 5555555441 12344579999999999999999999875
No 10
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=100.00 E-value=8.1e-57 Score=494.78 Aligned_cols=409 Identities=24% Similarity=0.335 Sum_probs=347.6
Q ss_pred CHHHHHHHHHHHhCCCCCCcCHHhhhhhhhccCCCCccCCCCCCCCcccCCCCCHHHHHHHHHHHhccccCcCccccccc
Q 001586 516 TLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLG 595 (1049)
Q Consensus 516 t~edid~lv~aL~~~~~~~~~~~~l~~~~~~~ip~~~~~~~~~~~~p~~~~~~se~e~~~~l~~l~~~d~~~~~~~i~lG 595 (1049)
..+|.+..+++++.+ |+|||+. .+||++++.+ ..+++.+++++||.|++++++++++||..+ .++|+.|
T Consensus 15 ~~~d~~~ML~~iG~~-----Sld~L~~---~~IP~~Ir~~--~~~~~~~~~~~sE~e~l~~l~~ia~kN~~~-~sfiG~G 83 (450)
T COG0403 15 SSADQQEMLAAIGVS-----SLDELFS---QDIPPSIRKK--LDTLLPLPKPLSEYEALAELKEIASKNKVF-TSFIGAG 83 (450)
T ss_pred ChHHHHHHHHHcCCC-----CHHHHhh---ccCCHHHHhc--ccccCCCCCCCCHHHHHHHHHHHHhcCchh-hhhccCc
Confidence 348999999999998 8999984 4899999865 122223468899999999999999999854 5789999
Q ss_pred cccccCccccccccccCccccc-CCCCCchhhhhcHHHHHHHHHHHHHHhhCCCcc--ccccCchHHHHHHHHHHHHHHH
Q 001586 596 SCTMKLNATTEMMPVTWPSFAN-IHPFAPADQAQGYQEMFNNLGEWLCTITGFDSF--SLQPNAGAAGEYAGLMVIRAYH 672 (1049)
Q Consensus 596 s~t~~~~~~~~~~~~~~~~f~~-~~P~~p~e~~~G~~~~i~el~~~la~l~G~~~~--~l~~~sGa~ge~a~l~air~y~ 672 (1049)
.|.+++|+.+....+++|+|++ |||||| |++||.+|+++|+|+++|+||||+.+ |+++.++|.|| |++|+.|.
T Consensus 84 yY~~~~P~vI~rnile~pewyTaYTPYQp-EISQGrLqaLfefQtlv~dLTGm~VANASm~DeaTAaAE-Am~ma~r~-- 159 (450)
T COG0403 84 YYDTYTPPVILRNILENPEWYTAYTPYQP-EISQGRLEALFEFQTLVADLTGLDVANASMLDEATAAAE-AMLMAKRV-- 159 (450)
T ss_pred ccCCcCcHHHHHHhhcCccccccCCCCch-hhhhHHHHHHHHHHHHHHHHhCCCcccchhhhhHHHHHH-HHHHHHHh--
Confidence 9999999999977799999999 999999 99999999999999999999999985 68888888777 88888775
Q ss_pred HhcCCCCCCEEEEcCCCCCccHHH----HHhcCCEEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCCcccccccc
Q 001586 673 KARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEG 748 (1049)
Q Consensus 673 ~~~G~~~r~~VLip~saHg~~pa~----a~~~G~~Vv~V~~d~~g~iD~~~L~~~i~~~~~~taaV~it~Pn~~G~i~~d 748 (1049)
.+ .++++++|+...|...-.. ++.+|++|+.++++ |+++|+++ + ..++.+|+++|||++|.+++|
T Consensus 160 -~k--~k~~~~~V~~~vhpqt~~Vl~Tra~~~g~~i~~~~~~-----d~~~l~~~-~--~~~~~gv~vQyP~~~G~~~~d 228 (450)
T COG0403 160 -TK--KKRNKFLVPKDVHPQTLDVLRTRAEGLGIEIEVVDAD-----DLDDLESA-D--DGDVFGVLVQYPNTFGIVEED 228 (450)
T ss_pred -hc--CcCceEEecCCCCHHHHHHHHhhcccCceEEEEeccc-----hhhhhhhc-c--ccCeEEEEEecCCCCCccchh
Confidence 22 2478899998766333222 55689999999885 88899888 4 269999999999999966658
Q ss_pred HHHHHHHHHHcCCEEEEeccccccccCcCCCCccCCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCC
Q 001586 749 IDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTG 828 (1049)
Q Consensus 749 i~eI~~lah~~G~ll~vD~A~~~a~~gl~~Pg~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~ 828 (1049)
+++|.+.+|++|++++| ++++.+++.+.+||++|+||++++. +.|++|+|||||++|++++++++.+++|||++|.+.
T Consensus 229 ~~~l~~~~h~~~al~~v-~aDplaL~LL~pPGe~GADIvvG~~-QrfGvPmgfGGPhag~fA~~~~~~R~mPGRlVG~S~ 306 (450)
T COG0403 229 LRALIEAAHSAGALVIV-AADPLALGLLKPPGEFGADIVVGSA-QRFGVPMGFGGPHAGYFAVKDEFKRQMPGRLVGVSV 306 (450)
T ss_pred HHHHHHHHhhcCCEEEE-EechhHhhccCCccccCCceEEecC-cccCCCcCCCCcceeeeeEhHhHhhcCCCceeeeee
Confidence 99999999999999999 8999999999999999999999997 889999999999999999999999999999999876
Q ss_pred CC-------------CCC-CCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc---CC
Q 001586 829 GI-------------PAP-EKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YP 891 (1049)
Q Consensus 829 ~~-------------~~~-~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~---~~ 891 (1049)
|. +|| +|+|+|+|||++ +++.+.++.+|+.++|++|+++++++++.++.|++++|+++ ++
T Consensus 307 D~~G~~A~rLaLQTREQHIRReKATSNICTn---QaLlA~~As~y~~~hGp~GLk~iA~r~~~~a~~la~~L~~~~~g~~ 383 (450)
T COG0403 307 DAAGKRAFRLALQTREQHIRREKATSNICTN---QALLALAASMYAVYHGPQGLKEIAERIHRLAAYLAAGLKEIGAGVE 383 (450)
T ss_pred cCCCCchhhhhHHHHHHHHhhhccchhhhHH---HHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhcCCceE
Confidence 54 233 479999999986 89999999999999999999999999999999999999964 45
Q ss_pred eeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEccCCCCHHHHHHHHHHHHHH
Q 001586 892 ILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISI 968 (1049)
Q Consensus 892 v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~eeid~fv~aL~~i 968 (1049)
+.+ ..+|.+|.++++. .....+.++....|+..+... ..++.+++||.+|+++||.|++++...
T Consensus 384 ~~~----~~fFdt~~v~~~~------~~~~~l~~~~~~~G~~L~~~~---~~~~~ia~tEt~t~~~i~~l~~~~~~~ 447 (450)
T COG0403 384 LVF----DHFFDTFTVRVPE------EVAEALLAAAIAGGINLRRVD---ADTVLIALTETTTKEDIDALVAAFGGV 447 (450)
T ss_pred ecc----ccceeeEEEecch------hHHHHHHHHHHhcCCceeeec---CCceEEEeecccCHHHHHHHHHHHhhh
Confidence 543 2688899988751 234556666667777776554 468999999999999999999988754
No 11
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=100.00 E-value=5.5e-56 Score=528.32 Aligned_cols=427 Identities=45% Similarity=0.776 Sum_probs=366.2
Q ss_pred ccCCCCccCCCCCCCCcccCCCCCHHHHHHHHHHHhccccCcCccccccccccccCccccccccccCcccccCCCCCchh
Q 001586 546 TAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPAD 625 (1049)
Q Consensus 546 ~~ip~~~~~~~~~~~~p~~~~~~se~e~~~~l~~l~~~d~~~~~~~i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e 625 (1049)
.+||+++++++++ .+| . +||.|+++|+++|+++|....++++++|+|+++.++.+....+++++|.+||||||..
T Consensus 32 ~~ip~~~~~~~~~-~~~---~-~se~~~~~~~~~l~~~n~~~~~~~~g~G~~~~~~~p~i~~~~~~~~~~~~~tpYq~e~ 106 (481)
T PRK04366 32 SLLPEELLRKEPP-ELP---E-VSELEVVRHYTRLSQKNYGVDTGFYPLGSCTMKYNPKINEKVARLPGFAELHPLQPEE 106 (481)
T ss_pred ccCCHHHhcCCCC-CCC---C-CCHHHHHHHHHHHHhcCCCCCcceecCcccCCCCCHHHHHHHHhCcchhcCCCCCChh
Confidence 4799999998876 676 3 9999999999999999998777899999999999998888778888998999999933
Q ss_pred hhhcHHHHHHHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCEEE
Q 001586 626 QAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIV 705 (1049)
Q Consensus 626 ~~~G~~~~i~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~Vv 705 (1049)
.+||.++++.++++++++++|++.+++++++|+.++..++++++.+...+|+.++++||++...|+.+...+.+.|++++
T Consensus 107 ~sqG~lel~~~~~~~la~l~G~~~~~l~~~~GA~a~~~~l~~~r~~~~~~Gd~~~~~Vlv~~~~hp~~~~~~~~~G~~vv 186 (481)
T PRK04366 107 TVQGALELMYELQEWLKEITGMDAVTLQPAAGAHGELTGLLMIRAYHEARGDTKRTEVIVPDSAHGTNPASAAMAGFKVV 186 (481)
T ss_pred hhhHHHHHHHHHHHHHHHHhCCCceEEEeCcHHHHHHHHHHHHHHHhhccCcCCCCEEEEcCCccHhHHHHHHHcCCEEE
Confidence 99999999999999999999999888999999988865555566655445543567899999999999988999999999
Q ss_pred EEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCCccccccccHHHHHHHHHHcCCEEEEeccccccccCcCCCCccCCc
Q 001586 706 SVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGAD 785 (1049)
Q Consensus 706 ~V~~d~~g~iD~~~L~~~i~~~~~~taaV~it~Pn~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~Pg~~GaD 785 (1049)
.++++++|.+|+++|+++++ ++|++|++++||++|+++.|+++|+++||++|++++||+|+..++.+...|+++|+|
T Consensus 187 ~v~~~~~~~~D~e~L~~~i~---~~t~~V~v~~Pn~tG~~~~dl~eI~~~a~~~gal~iVD~a~~~~~~g~~~~~~~GaD 263 (481)
T PRK04366 187 EIPSNEDGLVDLEALKAAVG---EDTAALMLTNPNTLGLFERNILEIAEIVHEAGGLLYYDGANLNAILGKARPGDMGFD 263 (481)
T ss_pred EeecCCCCCcCHHHHHhhcc---cCCeEEEEeCCCCccccchHHHHHHHHHHHcCCEEEEEecChhhhcccCCccccCCC
Confidence 99998889999999999997 789999999999999884379999999999999999999998776666689999999
Q ss_pred EEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCC-------CCC-CCCCCCCCCCccchhhHHHHHHHH
Q 001586 786 VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGI-------PAP-EKSQPLGTIAAAPWGSALILPISY 857 (1049)
Q Consensus 786 i~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~-------~~~-~~~~~t~~i~sa~~g~~~~~~~a~ 857 (1049)
++++++||||+.|+|+||||+|++++++++.+++|++.++..... .++ ++.+++ .++++.+.++|
T Consensus 264 ~~~~~~hK~l~~P~g~Ggp~~G~l~~~~~~~~~lp~~~v~~~g~~~~l~~~r~~~i~r~~a~-------t~~~l~~~~a~ 336 (481)
T PRK04366 264 VVHLNLHKTFSTPHGGGGPGSGPVGVKEELAPFLPVPVVEKDGDRYRLDYDRPKSIGRVRAF-------YGNFGVLVRAY 336 (481)
T ss_pred EEEEechhhcCCCCCCCCCCeeeeeehhhhHhhCCCCeeeccCCceeecccccccCCCcccc-------cCchHHHHHHH
Confidence 999999999999999999999999999999999999876532111 111 122322 23567788999
Q ss_pred HHHHHHchhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHHHCCcccCCC
Q 001586 858 TYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTM 937 (1049)
Q Consensus 858 a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~ 937 (1049)
.|+..+|.+|+++++++++.+++||+++|++++++.+. ++++++|++++..|.. .++++.+|+++|.++||++++.
T Consensus 337 ~~l~~~G~~Gl~~~a~~~~~~a~~l~~~L~~~~~~~~~---~~~~~~~~~~~~~~~~-~g~~~~~v~~~L~~~Gi~~~~~ 412 (481)
T PRK04366 337 AYIRSLGAEGLREVSEDAVLNANYLKARLKDIYDLPYD---RPCMHEFVLSGKKLKE-TGVRTLDIAKRLLDYGFHPPTI 412 (481)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhCcccCC---CCeeEEEEEECccccc-cCCCHHHHHHHHHHCCccCCcc
Confidence 99999999999999999999999999999987666553 3578899998754432 3568899999999999998866
Q ss_pred CCC--CCCEEEEEccCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCccccccchh
Q 001586 938 SWP--VPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKVTCLFLHHGYF 999 (1049)
Q Consensus 938 ~~p--~~~~lri~~t~~~t~eeid~fv~aL~~i~~~i~~i~~g~~~~~~~~l~~~ph~~~~~~~ 999 (1049)
.+| ..+++|+++|+++|++|||+|+++|+++.+++.+ +++.++++||+++.+++
T Consensus 413 ~~p~~~~~~l~is~~e~~t~edid~l~~~l~~i~~~~~~--------~~~~~~~~p~~~~~~~~ 468 (481)
T PRK04366 413 YFPLIVPEALMIEPTETESKETLDAFIAAMKQIAEEAKE--------NPELVKEAPHNTPVRRL 468 (481)
T ss_pred ccccccCCeEEEcccCCCCHHHHHHHHHHHHHHHHHHHh--------CcHhHhhCCCCCCCCCc
Confidence 666 3679999999999999999999999999988777 68899999999988765
No 12
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=100.00 E-value=1.5e-55 Score=522.80 Aligned_cols=422 Identities=38% Similarity=0.625 Sum_probs=377.9
Q ss_pred ccCCCCCHHHHHHHHHHhCCCCHHHhhhccCCccc-ccCCCCCCCCCCCCCHHHHHHHHHHHhcCCCc---cccccCCCC
Q 001586 100 RRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSI-RIDSMKFSKFDEGLTESQMIEHMQKLASMNKV---YKSFIGMGY 175 (1049)
Q Consensus 100 ~~~~~~~~~~~~~ml~~~g~~~~~~l~~~~ip~~~-~~~~~~lp~~~~~~sE~e~~~~~~~la~~n~~---~~~~lG~g~ 175 (1049)
++|||++++|+++||+++|++|+|||++ .||+.+ ++.+++|| +++||.|+++++.+++.+|.. ..+++|.|+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~lp---~~~~~~~v~~~~~~~~~~~~~~~~~~~~lg~g~ 77 (447)
T PRK00451 2 MPYIPHTEEDIREMLDAIGVKSIDELFA-DIPEELRLKRPLDLP---PGLSEMELLRHLRELAAKNKTAEEYPSFLGAGA 77 (447)
T ss_pred CCCCCCCHHHHHHHHHHhCCCCHHHHHH-hCCHHHHhCCCCCCC---CCCCHHHHHHHHHHHHhcCCCcCcCcccCcccc
Confidence 6899999999999999999999999995 699999 77778898 457999999999999987754 567999999
Q ss_pred CCCCCcHHHHHHHHhCCccccccCCChhhHhhhHHHHHHHHHHHHHHHhCCCCcceEeccchHHHHHHHHHHhhhccCCC
Q 001586 176 YNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKK 255 (1049)
Q Consensus 176 y~~~~p~~i~~~~~~~~~~~t~ytpyq~e~sqg~le~l~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a~~~~~~~g 255 (1049)
+++.+|..+. .++.+++|+++|+||+++.++|.++++.|+++++++++|++.+++++++|+|++++++++++... +|
T Consensus 78 ~~~~~p~~~~-~~~~~~~~~~~y~~~~~~~~~g~~~~~~e~~~~la~l~g~~~~~v~~~~g~t~~~~~~~~a~~~~--~g 154 (447)
T PRK00451 78 YDHYIPAVVD-HIISRSEFYTAYTPYQPEISQGTLQAIFEYQTMICELTGMDVANASMYDGATALAEAALMAVRIT--KR 154 (447)
T ss_pred cCCcCcHHHH-HHHhchhHHHhcCCCCCccchHHHHHHHHHHHHHHHHhCCCcceEEecCcHHHHHHHHHHHHHhc--CC
Confidence 9999999985 78888899999999999999999999999999999999999999999999999999998887544 78
Q ss_pred CEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCcc-------hhhc-cCCCEeEEEEEcCCCCeeeccHHHHHHHHHhCCc
Q 001586 256 KTFIIASNCHPQTIDICITRADGFDIKVVVSDLK-------DIDY-KSGDVCGVLVQYPGTEGEVLDYGDFIKNAHANGV 327 (1049)
Q Consensus 256 ~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~~~-------~l~~-l~~~t~~V~v~~pn~~G~i~di~~I~~~ah~~ga 327 (1049)
++|++++..||++..+++.+++..|++++.++.+ ++++ ++++|++|++++||++|.+.|+++|+++||++|+
T Consensus 155 ~~Vlv~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~d~~~l~~~i~~~t~~v~l~~pn~tG~v~~l~~I~~~a~~~~~ 234 (447)
T PRK00451 155 KKVLVSGAVHPEYREVLKTYLKGQGIEVVEVPYEDGVTDLEALEAAVDDDTAAVVVQYPNFFGVIEDLEEIAEIAHAGGA 234 (447)
T ss_pred CEEEEeCccCHHHHHHHHHHHHhCCcEEEEecCCCCCCCHHHHHHhcCCCeEEEEEECCCCCCeeCCHHHHHHHHHHCCC
Confidence 9999999999999999988888889999988764 3445 7889999999999999999999999999999999
Q ss_pred EEEEEeccccccCCCCCCcccceEEEecCccccccCCCCCCceEEEEEchhHHhcCCCceeeeeecCCCCcceeeecccc
Q 001586 328 KVVMATDLLALTILKPPGELGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTR 407 (1049)
Q Consensus 328 lliV~a~~~alg~l~~p~~~GaDivvgs~k~lg~P~~~GGP~~G~l~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtr 407 (1049)
+++|+.|.++++.+..++++|+|++++++|+|+.|+.+|||++||+++++++++.+|++++|++.+..++.+|.+.++.+
T Consensus 235 ~~iv~~d~~~~g~~~~~~~~~~D~~~~s~~k~~~~~~~~Gpg~G~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 314 (447)
T PRK00451 235 LFIVGVDPVSLGLLKPPGEYGADIVVGEGQPLGIPLSFGGPYLGFFATRKKLVRQMPGRLVGETVDADGKRGFVLTLQAR 314 (447)
T ss_pred EEEEEcChHHhccCCCcccCCCCEEEECCCcCCCCCCCCCCCchHHHhhHHHHhhCCCCEeeeecccCCCeeeEeecccc
Confidence 99987677788888788999999999999999999999999999999999999999999999987766778899999999
Q ss_pred cccccccccCCCccchhHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEcCCCCcceEEEecCC-HH
Q 001586 408 EQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD-AH 486 (1049)
Q Consensus 408 eq~irrekaTsni~t~~~l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~g~~~v~~~~~~~~v~i~~~~-~~ 486 (1049)
++++||+++|+|+|+++++.++.++.++.+++++|++++.+++.+++++++++|++++|++++..+++..++++++. ..
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~aaa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~v~~~~~~~ 394 (447)
T PRK00451 315 EQHIRREKATSNICTNQALNALAAAIYMSLLGPEGLRELAEQNHQKAHYLAERLAEIGGVELFDGPFFNEFVVRLPKPAE 394 (447)
T ss_pred ccccccccccccccccHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHhhcCCEEecCCCeEEEEEEecCCCHH
Confidence 99999999999999999888888888888899999999999999999999999999865888755556666666543 78
Q ss_pred HHHHHHHHcCCeee----eec---CCeEEEEeccCCCHHHHHHHHHHHh
Q 001586 487 AIASAAYKIEMNLR----VVD---SNTVTASFDETTTLEDVDKLFIVFA 528 (1049)
Q Consensus 487 ~v~~~L~~~gI~~~----~~~---~~~vris~~~~~t~edid~lv~aL~ 528 (1049)
++.++|.++||... ... .+.+|+|+++++|++|||+|+++|.
T Consensus 395 ~~~~~L~~~gi~~~~~~~~~~~~~~~~~rvs~~~~~t~e~i~~l~~~L~ 443 (447)
T PRK00451 395 EVNEALLEKGILGGYDLGRYYPELGNHLLVCVTEKRTKEDIDALVAALG 443 (447)
T ss_pred HHHHHHHhcCCCCCcccccccCCcCCEEEEecCCCCCHHHHHHHHHHHH
Confidence 99999999988632 111 3689999999999999999999996
No 13
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=100.00 E-value=7.6e-55 Score=518.58 Aligned_cols=381 Identities=20% Similarity=0.295 Sum_probs=325.4
Q ss_pred hhccCCccc-ccCCCCCCCCCCCCCHHHHHHHHHHHhcCCCc-cccccCCCCCCCCCcHHHHHHHHhCCccccccCCChh
Q 001586 126 IDATVPKSI-RIDSMKFSKFDEGLTESQMIEHMQKLASMNKV-YKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQA 203 (1049)
Q Consensus 126 ~~~~ip~~~-~~~~~~lp~~~~~~sE~e~~~~~~~la~~n~~-~~~~lG~g~y~~~~p~~i~~~~~~~~~~~t~ytpyq~ 203 (1049)
++++||+++ ++++++|| + +||.|+++|+++++++|.. ..+|+|.|++...+|+.|.++++++++| ++||||||
T Consensus 30 ~~~~ip~~~~~~~~~~~~---~-~se~~~~~~~~~l~~~n~~~~~~~~g~G~~~~~~~p~i~~~~~~~~~~-~~~tpYq~ 104 (481)
T PRK04366 30 LESLLPEELLRKEPPELP---E-VSELEVVRHYTRLSQKNYGVDTGFYPLGSCTMKYNPKINEKVARLPGF-AELHPLQP 104 (481)
T ss_pred ccccCCHHHhcCCCCCCC---C-CCHHHHHHHHHHHHhcCCCCCcceecCcccCCCCCHHHHHHHHhCcch-hcCCCCCC
Confidence 456799999 88889997 4 9999999999999999987 6799999988888888888999999998 59999999
Q ss_pred h-HhhhHHHHHHHHHHHHHHHhCCCCcceEeccchHHHHHHHHHH-hh---hcc--CCCCEEEEcCCCCHHHHHHHHHhh
Q 001586 204 E-IAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMC-NN---IQK--GKKKTFIIASNCHPQTIDICITRA 276 (1049)
Q Consensus 204 e-~sqg~le~l~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a-~~---~~~--~~g~~Vlv~~~~Hps~~~~l~~~a 276 (1049)
| ++||++|.++++|+++++++|++ ++++++++++.++++.|+ .+ ..+ +++++||+++..||++..+++
T Consensus 105 e~~sqG~lel~~~~~~~la~l~G~~--~~~l~~~~GA~a~~~~l~~~r~~~~~~Gd~~~~~Vlv~~~~hp~~~~~~~--- 179 (481)
T PRK04366 105 EETVQGALELMYELQEWLKEITGMD--AVTLQPAAGAHGELTGLLMIRAYHEARGDTKRTEVIVPDSAHGTNPASAA--- 179 (481)
T ss_pred hhhhhHHHHHHHHHHHHHHHHhCCC--ceEEEeCcHHHHHHHHHHHHHHHhhccCcCCCCEEEEcCCccHhHHHHHH---
Confidence 9 99999999999999999999997 689999888777766543 22 121 134599999999999998864
Q ss_pred cCCCeEEEEeCcc--------hhhc-cCCCEeEEEEEcCCCCeee-ccHHHHHHHHHhCCcEEEE-EeccccccCCCCCC
Q 001586 277 DGFDIKVVVSDLK--------DIDY-KSGDVCGVLVQYPGTEGEV-LDYGDFIKNAHANGVKVVM-ATDLLALTILKPPG 345 (1049)
Q Consensus 277 ~~~gi~v~~v~~~--------~l~~-l~~~t~~V~v~~pn~~G~i-~di~~I~~~ah~~galliV-~a~~~alg~l~~p~ 345 (1049)
..|++++.++.+ ++++ ++++|++|++++||++|.+ .|+++|+++||++|++++| ++|+.++..+.+|+
T Consensus 180 -~~G~~vv~v~~~~~~~~D~e~L~~~i~~~t~~V~v~~Pn~tG~~~~dl~eI~~~a~~~gal~iVD~a~~~~~~g~~~~~ 258 (481)
T PRK04366 180 -MAGFKVVEIPSNEDGLVDLEALKAAVGEDTAALMLTNPNTLGLFERNILEIAEIVHEAGGLLYYDGANLNAILGKARPG 258 (481)
T ss_pred -HcCCEEEEeecCCCCCcCHHHHHhhcccCCeEEEEeCCCCccccchHHHHHHHHHHHcCCEEEEEecChhhhcccCCcc
Confidence 468899887663 3555 7889999999999999988 5899999999999999999 67776632234789
Q ss_pred cccceEEEecC-ccccccCCCCCCceEEEEEchhHHhcCCCceeeeeecCCCCcceeeecccccccccccccCCCccchh
Q 001586 346 ELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQ 424 (1049)
Q Consensus 346 ~~GaDivvgs~-k~lg~P~~~GGP~~G~l~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irrekaTsni~t~~ 424 (1049)
++|||++++++ |+|++|+|+||||+||+++++++.++|||+++|+ +|+ +|++++| |+|||||+++|+ ++
T Consensus 259 ~~GaD~~~~~~hK~l~~P~g~Ggp~~G~l~~~~~~~~~lp~~~v~~----~g~-~~~l~~~-r~~~i~r~~a~t----~~ 328 (481)
T PRK04366 259 DMGFDVVHLNLHKTFSTPHGGGGPGSGPVGVKEELAPFLPVPVVEK----DGD-RYRLDYD-RPKSIGRVRAFY----GN 328 (481)
T ss_pred ccCCCEEEEechhhcCCCCCCCCCCeeeeeehhhhHhhCCCCeeec----cCC-ceeeccc-ccccCCCccccc----Cc
Confidence 99999999999 9999999999999999999999999999999985 355 6999998 999999999985 46
Q ss_pred HHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEc-CCCCcceEEEecC-----C--HHHHHHHHHHcC
Q 001586 425 ALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQ-GLPFFDTVKVKCA-----D--AHAIASAAYKIE 496 (1049)
Q Consensus 425 ~l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~g~~~v~-~~~~~~~v~i~~~-----~--~~~v~~~L~~~g 496 (1049)
++.++.+.+|+.++|++|+++++++++.+++||+++|+++ +++. +.++++++.|..+ + +.++.++|.++|
T Consensus 329 ~l~~~~a~~~l~~~G~~Gl~~~a~~~~~~a~~l~~~L~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~L~~~G 406 (481)
T PRK04366 329 FGVLVRAYAYIRSLGAEGLREVSEDAVLNANYLKARLKDI--YDLPYDRPCMHEFVLSGKKLKETGVRTLDIAKRLLDYG 406 (481)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhh--CcccCCCCeeEEEEEECccccccCCCHHHHHHHHHHCC
Confidence 7888888999999999999999999999999999999986 3332 3355667766542 2 789999999999
Q ss_pred Ceeee-----ecCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001586 497 MNLRV-----VDSNTVTASFDETTTLEDVDKLFIVFAG 529 (1049)
Q Consensus 497 I~~~~-----~~~~~vris~~~~~t~edid~lv~aL~~ 529 (1049)
|+++. ...+++|+|+|+++|++|||+|+++|..
T Consensus 407 i~~~~~~~p~~~~~~l~is~~e~~t~edid~l~~~l~~ 444 (481)
T PRK04366 407 FHPPTIYFPLIVPEALMIEPTETESKETLDAFIAAMKQ 444 (481)
T ss_pred ccCCccccccccCCeEEEcccCCCCHHHHHHHHHHHHH
Confidence 98752 2357899999999999999999999964
No 14
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=100.00 E-value=1.6e-54 Score=531.40 Aligned_cols=403 Identities=19% Similarity=0.246 Sum_probs=341.5
Q ss_pred CCHHHHHHHHHHhCCC---CH--H---HhhhccCCccc-ccCCCCCC-CCCCCCCHHHHHHHHHHHhcCCCc-cccccCC
Q 001586 105 ATPEDQAKMSELVGLD---NL--D---SLIDATVPKSI-RIDSMKFS-KFDEGLTESQMIEHMQKLASMNKV-YKSFIGM 173 (1049)
Q Consensus 105 ~~~~~~~~ml~~~g~~---~~--~---~l~~~~ip~~~-~~~~~~lp-~~~~~~sE~e~~~~~~~la~~n~~-~~~~lG~ 173 (1049)
+|.+|++..++.++-. .+ + +-+...||+++ ++.++.+| .+..-.||.||+||+++|++||.. -.+|+|.
T Consensus 413 ~t~~di~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~~~~~~~f~~~~sE~e~~r~~~~L~~kn~~~~~~fi~l 492 (939)
T TIGR00461 413 TTKADVENLLKVFDGEDNHGLSSQFLSEDVSNSFPREFQRTDEILRNEVFNMYHSETEMLRYLHRLESKDLALNNSMIPL 492 (939)
T ss_pred CCHHHHHHHHHHhcCCCccccchhhhhhhhcccCchhhhccCcccCCcccccCCCHHHHHHHHHHHHhcCCCccccCCCC
Confidence 5789999999999532 21 1 11222499998 77777775 111223999999999999999986 3589999
Q ss_pred CCCCCCCcHHHHHHHHhCCccccccCCChhh-HhhhHHHHHHHHHHHHHHHhCCCCcceEeccchHHHHHH-HHHHhhhc
Q 001586 174 GYYNTHVPPVILRNIMENPAWYTQYTPYQAE-IAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEA-MAMCNNIQ 251 (1049)
Q Consensus 174 g~y~~~~p~~i~~~~~~~~~~~t~ytpyq~e-~sqg~le~l~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA-~~~a~~~~ 251 (1049)
|.|.|.+|+.+..-...+++|+| ||||||| ++||.||.++|+|+|+|++|||| |+|++++++|.+|+ .+|+.+..
T Consensus 493 Gsctmk~na~v~~l~~s~~ef~t-~hPyqPe~~sqG~lq~i~elq~~l~eltGmd--~~Sl~p~aGA~gE~agL~aiR~y 569 (939)
T TIGR00461 493 GSCTMKLNATAEMMPITWPEFSN-IHPFQPSNQVEGYQELIAQLEKWLCSITGFD--AISLQPNSGAQGEYAGLRVIRSY 569 (939)
T ss_pred ccCCCccCHHHHHHHhcchhhcC-cCCCCchHHhHHHHHHHHHHHHHHHHHHCCC--CcccCCchHHHHHHHHHHHHHHH
Confidence 99999999999855589999999 9999999 99999999999999999999999 69999999999997 56676641
Q ss_pred ---c--CCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc--------chhhc-cC---CCEeEEEEEcCCCCeeecc
Q 001586 252 ---K--GKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--------KDIDY-KS---GDVCGVLVQYPGTEGEVLD 314 (1049)
Q Consensus 252 ---~--~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~~--------~~l~~-l~---~~t~~V~v~~pn~~G~i~d 314 (1049)
+ ++|++|+++...|+++-+.+ +..|+++++++. ++|++ ++ +++++|++|+||++|.++|
T Consensus 570 ~~~rge~~R~~vlip~saHgtnPasa----~~~G~~Vv~V~~d~~G~iDle~L~~~i~~~~~~taaV~iT~pst~G~~e~ 645 (939)
T TIGR00461 570 HESRGENHRNICLIPVSAHGTNPASA----AMAGMQVVPVNCDQDGNIDLVDLKNKAEQHGDELAAVMVTYPSTHGVFEP 645 (939)
T ss_pred HHhcCCCCCCEEEEEccccCcCHHHH----HHCCCEEEEeccCCCCCcCHHHHHHHHhhcCCceEEEEEEeCCcCceecc
Confidence 1 25678999999995544433 345889888775 34555 64 5899999999999999987
Q ss_pred -HHHHHHHHHhCCcEEEE-EeccccccCCCCCCcccceEEEecC-ccccccCCCCCCceEEEEEchhHHhcCCCceeeee
Q 001586 315 -YGDFIKNAHANGVKVVM-ATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVS 391 (1049)
Q Consensus 315 -i~~I~~~ah~~galliV-~a~~~alg~l~~p~~~GaDivvgs~-k~lg~P~~~GGP~~G~l~~~~~l~~~lpgrivG~s 391 (1049)
+++|+++||++|++++| ++|+.++..+.+|+++||||++++. |+|++|+|+||||+|+++|++.+.++|||+.+|.+
T Consensus 646 ~I~eI~~iah~~G~~v~VDgAq~~al~~l~~Pg~~GaDi~~~s~HKtf~~P~G~GGPg~G~i~vr~~L~~~lPg~~v~~t 725 (939)
T TIGR00461 646 TIQHACDIVHSFGGQVYLDGANMNAQVGLTSPGDLGADVCHLNLHKTFCIPHGGGGPGMGPIGVKSHLIPFLPKHDVVSM 725 (939)
T ss_pred cHHHHHHHHHHcCCEEEEEecChhhCCCCCCccccCCCEEEecCCccCCCCCCCCCCCeEEEEEhhhchhhcCCCccccc
Confidence 99999999999999999 7898889999999999999999998 88999999999999999999999999999998865
Q ss_pred ecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEcC
Q 001586 392 IDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQG 471 (1049)
Q Consensus 392 ~d~~g~~~~~l~lqtreq~irrekaTsni~t~~~l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~g~~~v~~ 471 (1049)
.|.+| |||||| ++||+|+++++.++.+.+|+..+|++||+++++....+|+|++++|++ + ++++.
T Consensus 726 ~d~~g----------req~Ig---a~s~~~~g~a~~~l~a~~yi~~lG~~GL~~~a~~ailnAnYl~~rL~~-~-~~~l~ 790 (939)
T TIGR00461 726 ITGIG----------GSKSIG---SVSAAPYGSASILPISWMYIKMMGNEGLPKASVVAILNANYMATRLKD-H-YPILF 790 (939)
T ss_pred ccCCC----------Cccccc---cccccccCcHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHhhc-c-Ccccc
Confidence 44322 789997 789999999999999999999999999999999999999999999987 4 77653
Q ss_pred C----CCcceEEEecC-------C-HHHHHHHHHHcCCeeeee---cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001586 472 L----PFFDTVKVKCA-------D-AHAIASAAYKIEMNLRVV---DSNTVTASFDETTTLEDVDKLFIVFAG 529 (1049)
Q Consensus 472 ~----~~~~~v~i~~~-------~-~~~v~~~L~~~gI~~~~~---~~~~vris~~~~~t~edid~lv~aL~~ 529 (1049)
+ +++++|+++.+ . +.+|+++|.++||....+ ..+++.+++||.+|++|||+|++++..
T Consensus 791 ~~~~~~~~hEfv~~~~~~~~~~g~~~~dIakrL~d~G~hapt~~~pv~g~lmiepTE~eskeelD~f~~al~~ 863 (939)
T TIGR00461 791 VGTLKHVAHECILDLRPLKAKTGIEAIDVAKRLQDYGFHAPTLSFPVPGTLMVEPTESESLEELDRFCDAMIA 863 (939)
T ss_pred cCCCCceeEEEEEeccchhhhcCCCHHHHHHHHHhCCeeccccCCccCCeEEEEeeccCCHHHHHHHHHHHHH
Confidence 2 57899999876 2 789999999999976443 246999999999999999999999963
No 15
>PRK12566 glycine dehydrogenase; Provisional
Probab=100.00 E-value=3.6e-52 Score=506.78 Aligned_cols=396 Identities=20% Similarity=0.279 Sum_probs=344.0
Q ss_pred CCCHHHHHHHHHHHhCCCCCCcCHHhhhhhhhccCCCCccCCCCCCCCcccCCCCCHHHHHHHHHHHhccccCcCccccc
Q 001586 514 TTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIP 593 (1049)
Q Consensus 514 ~~t~edid~lv~aL~~~~~~~~~~~~l~~~~~~~ip~~~~~~~~~~~~p~~~~~~se~e~~~~l~~l~~~d~~~~~~~i~ 593 (1049)
.-|.+|++..++.++.+ |+|||+. ++||+++|.++++ ++| .++||.|++++|+++++||..+ .++|+
T Consensus 19 g~~~~~~~~ML~~iG~~-----s~d~l~~---~~iP~~ir~~~~l-~lp---~~~sE~e~~~~~~~~a~kN~~~-~~fiG 85 (954)
T PRK12566 19 GPDAAEQQAMLDALGVA-----SRAELIE---QTVPPAIRLNRPL-DLP---AALDEQAALARLRGYAEQNQVW-TSLIG 85 (954)
T ss_pred CCCHHHHHHHHHhcCcc-----CHHHHhh---ccCCHHHhcCCCC-CCC---CCCCHHHHHHHHHHHHhcCCCc-ccccc
Confidence 35789999999999987 8999984 4899999888775 665 6899999999999999999874 57889
Q ss_pred cccccccCccccccccccCccccc-CCCCCchhhhhcHHHHHHHHHHHHHHhhCCCcc--ccccCchHHHHHHHHHHHHH
Q 001586 594 LGSCTMKLNATTEMMPVTWPSFAN-IHPFAPADQAQGYQEMFNNLGEWLCTITGFDSF--SLQPNAGAAGEYAGLMVIRA 670 (1049)
Q Consensus 594 lGs~t~~~~~~~~~~~~~~~~f~~-~~P~~p~e~~~G~~~~i~el~~~la~l~G~~~~--~l~~~sGa~ge~a~l~air~ 670 (1049)
.|++.+++|+.+....+++++|++ |||||| |++||.+|++.|+|+|+++|||||.+ |+++.++|.|| |++|+.|.
T Consensus 86 ~G~y~~~~P~vi~~~i~~~~~~yTaYTPYQp-EisQG~Lqal~e~Qtmi~~LtGm~vaNASl~D~atA~aE-A~~ma~~~ 163 (954)
T PRK12566 86 MGYHGTVTPTVILRNVLENPGWYTAYTPYQP-EIAQGRLEALLNFQQMTIDLTGLDLANASLLDEATAAAE-AMALAKRV 163 (954)
T ss_pred ccccCCcCcHHHHHHHHhCchhhhcCCCCCc-hhhhHHHHHHHHHHHHHHHHhCchhhhhhhccchhHHHH-HHHHHHHH
Confidence 999999999999666689999988 999999 99999999999999999999999975 78999999888 88887653
Q ss_pred HHHhcCCCCCCEEEEcCCCCCccHHH-------HHhcCCEEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCCccc
Q 001586 671 YHKARGDHHRNVCIIPVSAHGTNPAT-------AAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHG 743 (1049)
Q Consensus 671 y~~~~G~~~r~~VLip~saHg~~pa~-------a~~~G~~Vv~V~~d~~g~iD~~~L~~~i~~~~~~taaV~it~Pn~~G 743 (1049)
.+ .++++|+|+.+.| |.+ ++..|++++. ++++++++ +++++|+++|||++|
T Consensus 164 ---~~--~k~~~~~v~~~~h---P~~~~v~~t~~~~~g~~i~~-----------~~~~~~~~---~~~~~v~vq~P~~~G 221 (954)
T PRK12566 164 ---AK--SKSNRFFVDEHCH---PQTLSVLRTRAEGFGFELVV-----------DAVDNLAA---HAVFGALLQYPDTHG 221 (954)
T ss_pred ---hh--cCCCEEEECCCCC---HHHHHHHHHhhhcCCcEEEE-----------cchhhcCC---CCEEEEEEECCCCce
Confidence 22 1367899998765 775 3478999875 44555554 689999999999999
Q ss_pred cccccHHHHHHHHHHcCCEEEEeccccccccCcCCCCccCCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCc
Q 001586 744 VYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHP 823 (1049)
Q Consensus 744 ~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~Pg~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~ 823 (1049)
.++ |+++|++++|++|++++| ++++.+++.+.+||++|+||++++ +|.|++|++||||+.|++++++++.+++|||+
T Consensus 222 ~i~-d~~~i~~~~h~~gal~~~-~~d~laL~ll~~Pge~GADI~vG~-~Q~fGvp~~~GGP~ag~~a~~~~~~R~~PGRi 298 (954)
T PRK12566 222 EIR-DLRPLIDQLHGQQALACV-AADLLSLLVLTPPGELGADVVLGS-TQRFGVPMGYGGPHAAYFACRDDYKRAMPGRI 298 (954)
T ss_pred EEc-cHHHHHHHHHHcCCEEEE-EeCHHHHhCCCChhhcCCcEEeeC-CCcCCCCCCCCCCCeeeeeehHHHHhhCCCCc
Confidence 998 899999999999999765 899999999999999999999876 59999999999999999999999999999999
Q ss_pred cccCCCC-------------CCC-CCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc
Q 001586 824 VVSTGGI-------------PAP-EKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH 889 (1049)
Q Consensus 824 vg~t~~~-------------~~~-~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~ 889 (1049)
+|.+.|. +|| +|+|+|+|||++ +++.+.+|.+|+.++|++|+++++++++.+|.||+++|++.
T Consensus 299 vG~s~D~~G~~a~~l~LqtREQHIRReKAtSNICT~---qaL~A~~a~~Y~~~~Gp~Gl~~ia~~~~~~a~~l~~~l~~~ 375 (954)
T PRK12566 299 IGVSRDARGNTALRMALQTREQHIRREKANSNICTA---QVLLANIAGFYAVYHGPEGLKRIAQRVHRLTAILAAGLEAK 375 (954)
T ss_pred cceeecCCCCeeeehhhhHHHHHhhhccccchhhHH---HHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9987654 233 479999999996 88999999999999999999999999999999999999885
Q ss_pred -CCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEccCCCCHHHHHHHHHHHH
Q 001586 890 -YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALI 966 (1049)
Q Consensus 890 -~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~eeid~fv~aL~ 966 (1049)
+++.+ .++|++|++++. ..+.++.++..++|+.++... .+++.|++.|.+|.+|++.+++++.
T Consensus 376 g~~~~~----~~fF~~~~v~~~-------~~~~~~~~~a~~~~~n~r~~~---~~~~~~s~de~~~~~~~~~~~~~f~ 439 (954)
T PRK12566 376 GIKRLN----RHFFDTLTLEVG-------GAQAAIIESAEAARINLRILG---RGRLGVSLDETCDEATVARLFDIFL 439 (954)
T ss_pred CCcccc----CCccceEEEEcc-------CCHHHHHHHHHHCCCeeEEeC---CCeEEEEeCCCCCHHHHHHHHHHhc
Confidence 66653 368999999863 247788888889999987654 4789999999999999999999884
No 16
>PRK05367 glycine dehydrogenase; Provisional
Probab=100.00 E-value=1.1e-49 Score=498.13 Aligned_cols=402 Identities=19% Similarity=0.279 Sum_probs=341.1
Q ss_pred ccCCCHHHHHHHHHHHhCCCCCCcCHHhhhhhhhccCCCCccCCCCCCCCcccCCCCCHHHHHHHHHHHhccccCcCccc
Q 001586 512 DETTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSM 591 (1049)
Q Consensus 512 ~~~~t~edid~lv~aL~~~~~~~~~~~~l~~~~~~~ip~~~~~~~~~~~~p~~~~~~se~e~~~~l~~l~~~d~~~~~~~ 591 (1049)
+..+|.+|++..++.++.+ |+|||+. +.||+++++++++ .+| +++||.|+++++++|++||..+ .++
T Consensus 14 ~i~~~~~~~~~ml~~~g~~-----s~~~l~~---~~iP~~i~~~~~l-~lp---~~~sE~e~~~~~~~la~~N~~~-~~~ 80 (954)
T PRK05367 14 HIGPSAADQQAMLAALGAD-----SLDALID---QAVPASIRLAEPL-DLP---AALSEAEALAELRAIASKNKVF-RSY 80 (954)
T ss_pred CCCcCHHHHHHHHHhcCCC-----CHHHHhh---hhCCHHHhcCCCC-CCC---CCCCHHHHHHHHHHHHhcCCCC-Ccc
Confidence 3456899999999999987 8999985 3599999988875 665 6899999999999999999874 588
Q ss_pred cccccccccCccccccccccCccccc-CCCCCchhhhhcHHHHHHHHHHHHHHhhCCCcc--ccccCchHHHHHHHHHHH
Q 001586 592 IPLGSCTMKLNATTEMMPVTWPSFAN-IHPFAPADQAQGYQEMFNNLGEWLCTITGFDSF--SLQPNAGAAGEYAGLMVI 668 (1049)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f~~-~~P~~p~e~~~G~~~~i~el~~~la~l~G~~~~--~l~~~sGa~ge~a~l~ai 668 (1049)
|+.|.|.++.|+.+....+++++|++ |||||| |++||.+|++.++|+++++|+|++.+ ++++++|+.+| +++++.
T Consensus 81 ig~G~y~~~~P~vi~~~i~~~~~~~t~ytPyQ~-EisQG~Leal~~~Qt~la~LtG~~~anaSl~d~aTAa~e-a~~~a~ 158 (954)
T PRK05367 81 IGQGYYGTHTPPVILRNILENPAWYTAYTPYQP-EISQGRLEALLNFQTMVADLTGLEIANASLLDEATAAAE-AMALAK 158 (954)
T ss_pred cCCCCCCCcCcHHHHHHHHhCcchhhccCCCCh-HHHHHHHHHHHHHHHHHHHHHCCChhhccccccHHHHHH-HHHHhh
Confidence 99999999888888666688999877 999999 89999999999999999999999985 68888888877 777766
Q ss_pred HHHHHhcCCCCCCEEEEcCCCCCccHHH----HHhcCCEEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCCcccc
Q 001586 669 RAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGV 744 (1049)
Q Consensus 669 r~y~~~~G~~~r~~VLip~saHg~~pa~----a~~~G~~Vv~V~~d~~g~iD~~~L~~~i~~~~~~taaV~it~Pn~~G~ 744 (1049)
+ + .++ ++++||+++..|+.+-.. ++..|++|+.++.+.+ ++ + ++++++++++||++|.
T Consensus 159 ~-~--~~~--~~~~vlv~~~~hP~~~~v~~t~a~~~G~ev~~~~~~~d----~~------~---~~~~~vlvq~p~~~G~ 220 (954)
T PRK05367 159 R-V--SKS--KSNRFFVDDDVHPQTLDVLRTRAEPLGIEVVVGDAAKA----LD------H---DDVFGVLLQYPGTSGE 220 (954)
T ss_pred h-h--ccC--CCCEEEEcCccCHHHHHHHHHHHHhCCCEEEEecCccC----CC------c---ccEEEEEEecCCCCee
Confidence 4 2 221 257999999888655432 5679999999997542 11 2 5789999999999999
Q ss_pred ccccHHHHHHHHHHcCCEEEEeccccccccCcCCCCccCCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCcc
Q 001586 745 YEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPV 824 (1049)
Q Consensus 745 i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~Pg~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~v 824 (1049)
++ |+++|+++||++|++++||+ +.++++.+.+||++|+||+++++|||. +|+|+||||+|++++++++.+++|++.+
T Consensus 221 i~-d~~~i~~~ah~~Gal~~vda-~~~Al~~l~~pge~GaDi~vgs~qkfg-~P~g~GGP~aGflavr~~~~r~lpgriv 297 (954)
T PRK05367 221 VR-DYTALIAAAHARGALVAVAA-DLLALTLLTPPGEMGADIAVGSAQRFG-VPMGFGGPHAAYFAVRDAYKRSMPGRIV 297 (954)
T ss_pred ec-cHHHHHHHHHHcCCEEEEEe-hhhhccCCCChhhcCCCEEEeeCcccC-CCCCCCCCCEEEEEECHHHHhhCCCCee
Confidence 99 89999999999999999985 566888888999999999999999876 9999999999999999999999999999
Q ss_pred ccCCCC-------------CCC-CCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc-
Q 001586 825 VSTGGI-------------PAP-EKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH- 889 (1049)
Q Consensus 825 g~t~~~-------------~~~-~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~- 889 (1049)
|++.|. +++ +++++|+|+|++ +++.+.++++|+.++|++|++++++++..+++|++++|++.
T Consensus 298 G~s~d~~g~~~~~lalqtReqhiRrekaTsNict~---qaL~a~~a~~y~~~~g~~Gl~~Ia~~~~~la~~l~~~L~~~G 374 (954)
T PRK05367 298 GVSVDAAGNPALRLALQTREQHIRREKATSNICTA---QVLLAVMASMYAVYHGPEGLKAIARRVHRLAAILAAGLRALG 374 (954)
T ss_pred eeecccCCCcccccccccccccccccccccccchH---HHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhcC
Confidence 875432 122 468999999984 77888889999999999999999999999999999999873
Q ss_pred CCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEccCCCCHHHHHHHHHHHH
Q 001586 890 YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALI 966 (1049)
Q Consensus 890 ~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~eeid~fv~aL~ 966 (1049)
+++.. ..++.++.++++ .++.+|.++|.++||+++... .+.+|+|+||++|++|||+|+++|.
T Consensus 375 ~~~~~----~~~f~~~~~~~~-------~~~~~i~~~l~~~gi~~~~~~---~~~l~is~~e~~t~~did~l~~~l~ 437 (954)
T PRK05367 375 LEVVH----DSFFDTLTVEVG-------GDAAAVLARALAAGINLRRVD---DDHVGISLDETTTREDLAALLAVFG 437 (954)
T ss_pred cccCC----CCCCCeEEEeCC-------CCHHHHHHHHHHCCceecccc---CCEEEEEecccCCHHHHHHHHHHHc
Confidence 55542 245667777753 368899999999999986442 4789999999999999999999997
No 17
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=100.00 E-value=3.8e-47 Score=472.55 Aligned_cols=403 Identities=20% Similarity=0.271 Sum_probs=339.5
Q ss_pred CCCHHHHHHHHHHHhCCCCCCcCHHhhhhhhhccCCCCccCCCCCCCCcccCCCCCHHHHHHHHHHHhccccCcCccccc
Q 001586 514 TTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIP 593 (1049)
Q Consensus 514 ~~t~edid~lv~aL~~~~~~~~~~~~l~~~~~~~ip~~~~~~~~~~~~p~~~~~~se~e~~~~l~~l~~~d~~~~~~~i~ 593 (1049)
-+|++|++..++.++.+ |+|||+. ++||++++ ..++ .+|.|++++||.|++++|++|+.+|..+ .++++
T Consensus 41 ~~~~~~~~~ML~~ig~~-----s~d~l~~---~~iP~~i~-~~~l-~lp~~~~~~sE~e~~~~~~~la~kN~~~-~~fiG 109 (993)
T PLN02414 41 SATPEEQKAMAEYCGFD-----SLDALID---ATVPKSIR-LDSM-KLSKYDEGLTESQMLEHMKSLASKNKVF-KSYIG 109 (993)
T ss_pred CcCHHHHHHHHHhcCcc-----CHHHHhh---ccCCHHHh-cCCC-CCCCCCCCCCHHHHHHHHHHHHhcCCcc-ccccC
Confidence 35899999999999987 8999984 48999994 4454 7776668999999999999999999864 46788
Q ss_pred cccccccCccccccccccCccccc-CCCCCchhhhhcHHHHHHHHHHHHHHhhCCCc--cccccCchHHHHHHHHHHHHH
Q 001586 594 LGSCTMKLNATTEMMPVTWPSFAN-IHPFAPADQAQGYQEMFNNLGEWLCTITGFDS--FSLQPNAGAAGEYAGLMVIRA 670 (1049)
Q Consensus 594 lGs~t~~~~~~~~~~~~~~~~f~~-~~P~~p~e~~~G~~~~i~el~~~la~l~G~~~--~~l~~~sGa~ge~a~l~air~ 670 (1049)
.|.|.+++|+.+....+++++|++ |||||| |++||.+|.+.++|+++|+|+|++. +++++++++.+| +++++.+.
T Consensus 110 ~G~y~~~~P~~v~~~i~~~~~~~TaytPYqa-EisQG~lqal~~~Qt~ia~LtG~~~anaSL~d~aTAaae-a~~~a~~~ 187 (993)
T PLN02414 110 MGYYNTHVPPVILRNILENPGWYTQYTPYQA-EIAQGRLESLLNYQTMITDLTGLPMSNASLLDEGTAAAE-AMAMCNNI 187 (993)
T ss_pred CCCCCccCCHHHHHHHHhChHHHhhcCCCch-HHHHHHHHHHHHHHHHHHHHhCCChhhEeecCChHHHHH-HHHHHHhc
Confidence 889999999999666689999977 999999 9999999999999999999999987 468888888777 77776542
Q ss_pred HHHhcCCCCCCEEEEcCCCCCccHHH----HHhcCCEEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCCcccccc
Q 001586 671 YHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYE 746 (1049)
Q Consensus 671 y~~~~G~~~r~~VLip~saHg~~pa~----a~~~G~~Vv~V~~d~~g~iD~~~L~~~i~~~~~~taaV~it~Pn~~G~i~ 746 (1049)
.+| ++++||+++..|+.+-.. ++..|++|+.++.+.. | ... ++++++++++||++|.+.
T Consensus 188 ---~~g--~~~~VlVs~~~hP~~~~v~~t~a~~~GieV~~v~~~~~---~------~~~---~~v~~vlvq~P~~~G~v~ 250 (993)
T PLN02414 188 ---LKG--KKKKFLIASNCHPQTIDVCQTRADGLGLEVVVADEKDF---D------YSS---GDVCGVLVQYPATDGEVL 250 (993)
T ss_pred ---ccC--CCCEEEEcCccCHhHHHHHHHhhhhcCCEEEEecchhh---c------ccc---CceEEEEEecCCCCeEEc
Confidence 233 468899999888665433 4568999999987431 1 112 578889999999999998
Q ss_pred ccHHHHHHHHHHcCCEEEEeccccccccCcCCCCccCCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCcccc
Q 001586 747 EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVS 826 (1049)
Q Consensus 747 ~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~Pg~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~ 826 (1049)
|+++|+++||++|++++| +||+.+++++.+|+++|+||++++.|||. +|+|+|||++|++++++++.+.+||+++|+
T Consensus 251 -dv~~I~~~ah~~GaL~iV-aad~lal~~l~~pge~GADi~vgsgqKwg-~P~G~GGP~aGflavr~~~~r~~PgriVG~ 327 (993)
T PLN02414 251 -DYAEFVKNAHANGVKVVM-ATDLLALTMLKPPGEWGADIVVGSAQRFG-VPMGYGGPHAAFLATSQEYKRLMPGRIIGV 327 (993)
T ss_pred -CHHHHHHHHHHcCCEEEE-EECHHHhcCCCCHhhccCcEEEECCCccc-cCCCCCCCCeeEEEECHHHHhhCCCcccCc
Confidence 899999999999999999 99999999998899999999999999985 999999999999999999999999999987
Q ss_pred CCCC-------------CCC-CCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc-CC
Q 001586 827 TGGI-------------PAP-EKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YP 891 (1049)
Q Consensus 827 t~~~-------------~~~-~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~-~~ 891 (1049)
+.|. +++ +++++|+|+|++ +++.+.++.+|+.++|++|++++++++..++.|++++|++. ++
T Consensus 328 s~d~~g~~~~~l~LqtReqhiRrEkaTsNict~---qaL~A~la~~y~~~~g~~Gl~~Ia~ri~~la~~l~~~L~~~G~~ 404 (993)
T PLN02414 328 SVDSSGKPALRMAMQTREQHIRRDKATSNICTA---QALLANMAAMYAVYHGPEGLKTIAQRVHGLAGVFAAGLKKLGFQ 404 (993)
T ss_pred ccCCCCCcccccccccccchhhhcccccchhHH---HHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhhcCCc
Confidence 5432 122 368999999985 77778888899999999999999999999999999999874 55
Q ss_pred eeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEccCCCCHHHHHHHHHHHHH
Q 001586 892 ILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALIS 967 (1049)
Q Consensus 892 v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~eeid~fv~aL~~ 967 (1049)
+.. .+++++|+|+++ +..++.++|.++||.++... .+.+|+|+++.+|++|||+|+++|..
T Consensus 405 ~~~----~~~f~~vt~~~~--------~~~~v~~~L~~~gI~l~~~~---~~~lrvs~~e~~T~edId~L~~~l~~ 465 (993)
T PLN02414 405 VQS----LPFFDTVKVKCS--------DADAIADAAAKVGINLRVVD---ANTVTVSFDETTTLEDVDKLFKVFAG 465 (993)
T ss_pred cCC----CCCcCeEEEecC--------CHHHHHHHHHHCCCeeEEec---CCeEEEEeeccCCHHHHHHHHHHHcc
Confidence 532 256778888763 35789999999999876443 46899999999999999999999974
No 18
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=100.00 E-value=1.9e-41 Score=381.81 Aligned_cols=397 Identities=22% Similarity=0.307 Sum_probs=330.0
Q ss_pred CHHHHHHHHHHHhCCCCCCcCHHhhhhhhhccCCCCccCCCCCCCCcccCCCCCHHHHHHHHHHHhccccCcCccccccc
Q 001586 516 TLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLG 595 (1049)
Q Consensus 516 t~edid~lv~aL~~~~~~~~~~~~l~~~~~~~ip~~~~~~~~~~~~p~~~~~~se~e~~~~l~~l~~~d~~~~~~~i~lG 595 (1049)
++.|..+.++-++.+ ++++|+. +.+|++++.++++ .+| ++++|.||++++..+++||.. ++++|+.|
T Consensus 60 ~~~dq~~ml~tlG~~-----dl~~l~~---~~VP~~Ir~~~~l-~~~---~~~~E~eml~~l~~ia~kNk~-~ksfIGmG 126 (1001)
T KOG2040|consen 60 SPTDQQQMLDTLGYK-----DLDELIE---KTVPKSIRLKRPL-KMD---KPLCESEMLQHLEDIASKNKI-WKSFIGMG 126 (1001)
T ss_pred CchHHHHHHHhcChh-----hHHHHHH---hhcchhhcccchh-cCC---CCcCHHHHHHHHHHHHhhhhH-HHHhhccc
Confidence 566777778888776 6777764 5799999998885 654 799999999999999999985 57899999
Q ss_pred cccccCccccccccccCccccc-CCCCCchhhhhcHHHHHHHHHHHHHHhhCCCcc--ccccCchHHHHHHHHHHHHHHH
Q 001586 596 SCTMKLNATTEMMPVTWPSFAN-IHPFAPADQAQGYQEMFNNLGEWLCTITGFDSF--SLQPNAGAAGEYAGLMVIRAYH 672 (1049)
Q Consensus 596 s~t~~~~~~~~~~~~~~~~f~~-~~P~~p~e~~~G~~~~i~el~~~la~l~G~~~~--~l~~~sGa~ge~a~l~air~y~ 672 (1049)
++...+|+++....+.+++|++ |+|||| |++||.++.+-++|++++++||++.+ ++...++|.|| |+.++.|.
T Consensus 127 Yyn~~vP~~I~RNilenp~W~TqYTPYQ~-EIsQGRLEsllNyQTmi~dlTGL~~aNASLLDEgTAaaE-Am~l~~~~-- 202 (1001)
T KOG2040|consen 127 YYNTHVPAVILRNILENPGWYTQYTPYQA-EISQGRLESLLNYQTMITDLTGLPMANASLLDEGTAAAE-AMALCNRI-- 202 (1001)
T ss_pred cccccCcHHHHHHhhhCCcceeccCCCch-hhhhhhHHHHhhhHHhhhhccCCcccchhhhccchhHHH-HHHHHHhh--
Confidence 9999999999999899999988 999999 99999999999999999999999874 68888888877 77776653
Q ss_pred HhcCCCCCCEEEEcCCCCCccHHH----HHhcCCEEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCCcccccccc
Q 001586 673 KARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEG 748 (1049)
Q Consensus 673 ~~~G~~~r~~VLip~saHg~~pa~----a~~~G~~Vv~V~~d~~g~iD~~~L~~~i~~~~~~taaV~it~Pn~~G~i~~d 748 (1049)
.+|++++|....|.-.-.. +..+|++++..+. ++ ++...+++++|+++||.+.|.+. |
T Consensus 203 -----~krkk~vvd~~~hpqtlsV~~TRa~~~~i~v~~~~~--------~~----~~~s~~~v~gvlvQYP~t~G~i~-d 264 (1001)
T KOG2040|consen 203 -----NKRKKFVVDSNCHPQTLSVVKTRAKGFGIKVVVSDI--------KE----ADYSSKDVSGVLVQYPDTEGSVL-D 264 (1001)
T ss_pred -----cccceEEecCCCCcchhhhhhccccccceeEEecCH--------HH----hhccccceeEEEEEcCCCCCccc-C
Confidence 2456788877666433332 3456777554432 22 22223689999999999999998 8
Q ss_pred HHHHHHHHHHcCCEEEEeccccccccCcCCCCccCCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCC
Q 001586 749 IDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTG 828 (1049)
Q Consensus 749 i~eI~~lah~~G~ll~vD~A~~~a~~gl~~Pg~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~ 828 (1049)
..++.+.+|+.|.++++ +++..++..+.+||++|+||+++|. +-|++|+|+|||+.||++|++.+.+.+|||++|.+.
T Consensus 265 ~~el~~~a~~~~s~vv~-atDLLaLtiLrpPgefGaDIavGSs-QRFGVPlGYGGPHAaFfAv~~~l~R~mPGRiiGvtk 342 (1001)
T KOG2040|consen 265 FDELVELAHANGSLVVM-ATDLLALTILRPPGEFGADIAVGSS-QRFGVPLGYGGPHAAFFAVSESLVRMMPGRIIGVTK 342 (1001)
T ss_pred HHHHHHHhhccCceEEE-eehhhHHHccCChhhcCceeeeccc-cccCccccCCCchHHHHHHHHHHHhhCCCceEeeee
Confidence 99999999999999888 7888899999999999999999987 889999999999999999999999999999999876
Q ss_pred CC-------------CCC-CCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc-CCee
Q 001586 829 GI-------------PAP-EKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPIL 893 (1049)
Q Consensus 829 ~~-------------~~~-~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~-~~v~ 893 (1049)
|. +|| +|+++|+|||++ +++.+.++.+|.-+.|++|++++++++...+-+|..+|+.. .++.
T Consensus 343 D~~gk~a~RLALQTREQHIrRDKATSNICTA---QALLANmaAmyaiYHGp~gL~~IArrvh~~T~~l~~~l~~aghel~ 419 (1001)
T KOG2040|consen 343 DALGKEAYRLALQTREQHIRRDKATSNICTA---QALLANMAAMYAIYHGPHGLKEIARRVHNLTLILAEGLKNAGHELQ 419 (1001)
T ss_pred cccccHHHHHHHHHHHHHhhhhccchhhhHH---HHHHHHHHHHHhhhcCcHHHHHHHHHHHHHHHHHHHHHhhcchhhc
Confidence 54 233 478999999986 88999999999999999999999999999999999999864 5553
Q ss_pred eccCCCceeeEEEEeccCccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEccCCCCHHHHHHHHHHHH
Q 001586 894 FRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALI 966 (1049)
Q Consensus 894 ~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~eeid~fv~aL~ 966 (1049)
. .++|...-+.+ +...+++.++..+++|..+... .+++-+++.|..+++|+|.++..+.
T Consensus 420 ~----k~fFDTLkI~~-------~~s~~~~l~rA~~~~iNlr~~e---d~tigvslDETv~~~DvddLl~vf~ 478 (1001)
T KOG2040|consen 420 H----KPFFDTLKIRC-------GCSAEEVLDRAAKRQINLRLVE---DGTIGVSLDETVTEKDVDDLLWVFN 478 (1001)
T ss_pred c----ccccceEEEEe-------cCcHHHHHHHHHhhcCceEEee---cCceEEeecccccHHHHHHHHHHHc
Confidence 2 23444444443 4478899999988888876544 5899999999999999999999886
No 19
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=100.00 E-value=1.9e-39 Score=356.48 Aligned_cols=389 Identities=20% Similarity=0.294 Sum_probs=302.6
Q ss_pred CCCCHHHhhhccCCcccccCCCCCCCCCCCCCHHHHHHHHHHHhcCCCcc-ccccCCCCCCCCCcHHHHHHHHhCCcccc
Q 001586 118 GLDNLDSLIDATVPKSIRIDSMKFSKFDEGLTESQMIEHMQKLASMNKVY-KSFIGMGYYNTHVPPVILRNIMENPAWYT 196 (1049)
Q Consensus 118 g~~~~~~l~~~~ip~~~~~~~~~lp~~~~~~sE~e~~~~~~~la~~n~~~-~~~lG~g~y~~~~p~~i~~~~~~~~~~~t 196 (1049)
|++..++-....+|..++.+.+.+| .+||.||+||+++|+++|... +.++-.|.+-..+++.+.......|+| .
T Consensus 19 ~~~l~~~~~~~~L~~~~~r~~~~~P----e~SE~e~~Rh~~rLs~kn~avd~~m~PLGSCTMK~Np~~e~~~~~~p~f-~ 93 (496)
T COG1003 19 GYSLPEQVVEEYLPHPVFRRYPPLP----EHSETEMVRHYTRLSQKDLAVDRGMIPLGSCTMKLNPKAEMKPATWPEF-A 93 (496)
T ss_pred ccccccccchhhcCcHHhhcCCCCc----cccHHHHHHHHHHHHhcccccccCccCCcccccccCchhhcccccccch-h
Confidence 4444444445557777733333335 699999999999999999875 345556655556888887777788875 5
Q ss_pred ccCCChhh-HhhhHHHHHHHHHHHHHHHhCCCCcceEeccchHHHHHHHH-HHhh-hc--c--CCCCEEEEcCCCCHHHH
Q 001586 197 QYTPYQAE-IAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMA-MCNN-IQ--K--GKKKTFIIASNCHPQTI 269 (1049)
Q Consensus 197 ~ytpyq~e-~sqg~le~l~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~-~a~~-~~--~--~~g~~Vlv~~~~Hps~~ 269 (1049)
..+||||| ..||.++.+.++|++++++||||. +||.+.+.|..|-.. |+++ +. + +.|+.+||+++.|..+=
T Consensus 94 ~iHP~~pe~~vqG~l~li~~Lq~~L~~ITG~Da--vsLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGTNP 171 (496)
T COG1003 94 NIHPFQPEEQVQGYLELIYELQEWLKEITGMDA--VSLQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGTNP 171 (496)
T ss_pred hcCCCCChHHHHHHHHHHHHHHHHHHHhcCCce--eeccCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEeeccccCCCh
Confidence 56999999 899999999999999999999998 999998888888543 4444 22 2 26788999999995544
Q ss_pred HHHHHhhcCCCeEEEEeCc--------chhhc-cCCCEeEEEEEcCCCCeeec-cHHHHHHHHHhCCcEEEE-Eeccccc
Q 001586 270 DICITRADGFDIKVVVSDL--------KDIDY-KSGDVCGVLVQYPGTEGEVL-DYGDFIKNAHANGVKVVM-ATDLLAL 338 (1049)
Q Consensus 270 ~~l~~~a~~~gi~v~~v~~--------~~l~~-l~~~t~~V~v~~pn~~G~i~-di~~I~~~ah~~galliV-~a~~~al 338 (1049)
+-. .-.|++|+.|+. +||++ ++++++++++||||+.|..+ +|.+|++++|++|++|++ |+++.++
T Consensus 172 ASA----am~G~~VV~V~~~~~G~VDlddLk~k~~~~~AalMiTnPsT~GvFE~~I~ei~~ivH~~Gg~vY~DGANlNA~ 247 (496)
T COG1003 172 ASA----AMAGFKVVVVKCDENGNVDLDDLRAKAEDNLAALMITNPSTLGVFEEDIREICEIVHEAGGQVYYDGANLNAI 247 (496)
T ss_pred hhH----hhcCceEEEEecCCCCCccHHHHHHHhccceeEEEeccCcccccchhhHHHHHHHHHHcCCEEEecCcchhhh
Confidence 332 234888888654 56776 78999999999999999997 899999999999999999 8899898
Q ss_pred cCCCCCCcccceEEEecC-ccccccCCCCCCceEEEEEchhHHhcCCCceeeeeecCCCCcceeeecccccccccccccC
Q 001586 339 TILKPPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKAT 417 (1049)
Q Consensus 339 g~l~~p~~~GaDivvgs~-k~lg~P~~~GGP~~G~l~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irrekaT 417 (1049)
-.+.+||++|+||+..+. |+|.+|+|.||||+|-+.|+..+...||++. .. .+ +.. |.+....+ .-+-|- .
T Consensus 248 vG~~rPGd~G~DV~HlNLHKTF~iPHGGGGPG~GPvgVk~~L~pfLP~p~-~~-~~--~~~-y~~~~~~~-~s~g~~--~ 319 (496)
T COG1003 248 VGLARPGDMGFDVVHLNLHKTFCIPHGGGGPGAGPVGVKAHLAPFLPGPV-VY-HD--VGE-YRLDYDGK-KSIGVS--A 319 (496)
T ss_pred hccccccccccceEEeecccccccCCCCCCCCCCceehHhhccccCCCCc-cc-CC--Ccc-ccccCCCC-ccceee--c
Confidence 888899999999999999 9999999999999999999999999999865 21 01 111 33322111 122222 2
Q ss_pred CCccchhHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEc-CC--CCcceEEEecC------C--HH
Q 001586 418 SNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQ-GL--PFFDTVKVKCA------D--AH 486 (1049)
Q Consensus 418 sni~t~~~l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~g~~~v~-~~--~~~~~v~i~~~------~--~~ 486 (1049)
.++.+.+. -..+-+|+..+|++||++..+...-+|+|++++|+.. +++. .+ ..-++++++.. + +.
T Consensus 320 a~~Gs~~i--l~~a~~YI~~mG~~GL~~ase~AvLNANYia~rL~~~--y~~~y~~~~~~~HE~ild~r~l~~~~Gv~~~ 395 (496)
T COG1003 320 APYGSASI--LPIAWAYIRMMGADGLKQASEVAVLNANYIARRLKGY--YPVPYTGENRVAHECILDARPLKKETGVRAL 395 (496)
T ss_pred cccCcchH--HHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHHhhhc--CccccCCCCcceeEEEeechHhHhhcCCcHH
Confidence 33433333 3456679999999999999999999999999999863 6664 22 24578888765 3 68
Q ss_pred HHHHHHHHcCCeeee-----ecCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001586 487 AIASAAYKIEMNLRV-----VDSNTVTASFDETTTLEDVDKLFIVFAG 529 (1049)
Q Consensus 487 ~v~~~L~~~gI~~~~-----~~~~~vris~~~~~t~edid~lv~aL~~ 529 (1049)
+|+++|.+.|++... +..++++|.+||+.+++++|+|+++|..
T Consensus 396 DvAKrLlD~GfHaPT~~FPliV~~tLMIEPTEsEsk~eLDrf~dami~ 443 (496)
T COG1003 396 DVAKRLLDYGFHAPTMYFPLIVAGTLMIEPTESESKEELDRFIDAMIA 443 (496)
T ss_pred HHHHHHHhcCCCCCcccCccccccceeecCCCCCCHHHHHHHHHHHHH
Confidence 999999999997543 3579999999999999999999999963
No 20
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=100.00 E-value=1.3e-37 Score=369.44 Aligned_cols=413 Identities=25% Similarity=0.374 Sum_probs=315.6
Q ss_pred CCCHHHHHHHHHHHhCCCCCCcCHHhhhhhhhccCCCCccCCCCCCCCcccCCCCCHHHHHHHHHHHhccccCcCccccc
Q 001586 514 TTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIP 593 (1049)
Q Consensus 514 ~~t~edid~lv~aL~~~~~~~~~~~~l~~~~~~~ip~~~~~~~~~~~~p~~~~~~se~e~~~~l~~l~~~d~~~~~~~i~ 593 (1049)
-|+++|++.+++.|+.+ |+|||++ +||+.++++.++ ++| .++||+++++++.+++++|.......++
T Consensus 6 ~~~~~~~~~~~~~~~~~-----~~~~~~~----~~p~~~~~~~~~-~lp---~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 72 (447)
T PRK00451 6 PHTEEDIREMLDAIGVK-----SIDELFA----DIPEELRLKRPL-DLP---PGLSEMELLRHLRELAAKNKTAEEYPSF 72 (447)
T ss_pred CCCHHHHHHHHHHhCCC-----CHHHHHH----hCCHHHHhCCCC-CCC---CCCCHHHHHHHHHHHHhcCCCcCcCccc
Confidence 36899999999999987 8999874 899999988875 666 4579999999999999888655445667
Q ss_pred cccccc--cCccccccccccCcccc-cCCCCCchhhhhcHHHHHHHHHHHHHHhhCCCcccccc-CchHHHHHHHHHHHH
Q 001586 594 LGSCTM--KLNATTEMMPVTWPSFA-NIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQP-NAGAAGEYAGLMVIR 669 (1049)
Q Consensus 594 lGs~t~--~~~~~~~~~~~~~~~f~-~~~P~~p~e~~~G~~~~i~el~~~la~l~G~~~~~l~~-~sGa~ge~a~l~air 669 (1049)
+|.+.+ ..+...... ....+|. .|+|+++ +.++|.++++.|+++++++++|++...+.. ++|+.+.++++++++
T Consensus 73 lg~g~~~~~~p~~~~~~-~~~~~~~~~y~~~~~-~~~~g~~~~~~e~~~~la~l~g~~~~~v~~~~g~t~~~~~~~~a~~ 150 (447)
T PRK00451 73 LGAGAYDHYIPAVVDHI-ISRSEFYTAYTPYQP-EISQGTLQAIFEYQTMICELTGMDVANASMYDGATALAEAALMAVR 150 (447)
T ss_pred CcccccCCcCcHHHHHH-HhchhHHHhcCCCCC-ccchHHHHHHHHHHHHHHHHhCCCcceEEecCcHHHHHHHHHHHHH
Confidence 776443 333333322 3444564 4999999 889999999999999999999998765433 344444445555443
Q ss_pred HHHHhcCCCCCCEEEEcCCCCCccHHHHH----hcCCEEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCCccccc
Q 001586 670 AYHKARGDHHRNVCIIPVSAHGTNPATAA----MCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVY 745 (1049)
Q Consensus 670 ~y~~~~G~~~r~~VLip~saHg~~pa~a~----~~G~~Vv~V~~d~~g~iD~~~L~~~i~~~~~~taaV~it~Pn~~G~i 745 (1049)
. .++++||++...|+.+...+. ..|++++.++++++ .+|+++|+++++ ++|++|++++||.+|.+
T Consensus 151 ~-------~~g~~Vlv~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~~-~~d~~~l~~~i~---~~t~~v~l~~pn~tG~v 219 (447)
T PRK00451 151 I-------TKRKKVLVSGAVHPEYREVLKTYLKGQGIEVVEVPYEDG-VTDLEALEAAVD---DDTAAVVVQYPNFFGVI 219 (447)
T ss_pred h-------cCCCEEEEeCccCHHHHHHHHHHHHhCCcEEEEecCCCC-CCCHHHHHHhcC---CCeEEEEEECCCCCCee
Confidence 1 146789999999988777644 47999999999887 999999999997 78999999999889999
Q ss_pred cccHHHHHHHHHHcCCEEEEeccccccccCcCCCCccCCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccc
Q 001586 746 EEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVV 825 (1049)
Q Consensus 746 ~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~Pg~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg 825 (1049)
+ |+++|+++||++|++++++ ++..+.+.+..|+++|+|+++++.|| |++|+.+||||+|++++++++.+.+|++.+|
T Consensus 220 ~-~l~~I~~~a~~~~~~~iv~-~d~~~~g~~~~~~~~~~D~~~~s~~k-~~~~~~~~Gpg~G~l~~~~~~~~~~~~~~~g 296 (447)
T PRK00451 220 E-DLEEIAEIAHAGGALFIVG-VDPVSLGLLKPPGEYGADIVVGEGQP-LGIPLSFGGPYLGFFATRKKLVRQMPGRLVG 296 (447)
T ss_pred C-CHHHHHHHHHHCCCEEEEE-cChHHhccCCCcccCCCCEEEECCCc-CCCCCCCCCCCchHHHhhHHHHhhCCCCEee
Confidence 8 7999999999999999983 22335555667899999999999876 7899999999999999999988888877666
Q ss_pred cCCCC-CC-------------CCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc--
Q 001586 826 STGGI-PA-------------PEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-- 889 (1049)
Q Consensus 826 ~t~~~-~~-------------~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~-- 889 (1049)
++.+. ++ ..+++.+.++++. ....+.++++++..++.+|++++.++..++++++.++|+++
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~aaa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~g 373 (447)
T PRK00451 297 ETVDADGKRGFVLTLQAREQHIRREKATSNICTN---QALNALAAAIYMSLLGPEGLRELAEQNHQKAHYLAERLAEIGG 373 (447)
T ss_pred eecccCCCeeeEeecccccccccccccccccccc---HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 53211 00 1233445555542 22333456667888899999999999999999999999875
Q ss_pred CCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHHHCCcccCC--C-CCC-CCCEEEEEccCCCCHHHHHHHHHHH
Q 001586 890 YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPT--M-SWP-VPGTLMIEPTESESKEELDRYCDAL 965 (1049)
Q Consensus 890 ~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~--~-~~p-~~~~lri~~t~~~t~eeid~fv~aL 965 (1049)
+++ +. +.+++.++++++ .+..+++++|.++|+.+.. . .+| ..+++|+++++++|++|+|+|+++|
T Consensus 374 ~~~-~~---~~~~~~~~v~~~-------~~~~~~~~~L~~~gi~~~~~~~~~~~~~~~~~rvs~~~~~t~e~i~~l~~~L 442 (447)
T PRK00451 374 VEL-FD---GPFFNEFVVRLP-------KPAEEVNEALLEKGILGGYDLGRYYPELGNHLLVCVTEKRTKEDIDALVAAL 442 (447)
T ss_pred EEe-cC---CCeEEEEEEecC-------CCHHHHHHHHHhcCCCCCcccccccCCcCCEEEEecCCCCCHHHHHHHHHHH
Confidence 333 22 345555566653 3568999999999987532 1 122 3479999999999999999999999
Q ss_pred HHHH
Q 001586 966 ISIR 969 (1049)
Q Consensus 966 ~~i~ 969 (1049)
++++
T Consensus 443 ~~~~ 446 (447)
T PRK00451 443 GEVL 446 (447)
T ss_pred HHHh
Confidence 8764
No 21
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=100.00 E-value=9.2e-36 Score=348.03 Aligned_cols=375 Identities=45% Similarity=0.654 Sum_probs=303.6
Q ss_pred HHHHHHHHHHHhcCCCccc---cccCCCCCCCCCcHHHHHHHHhCCccccccCCChhhHhhhHHHHHHHHHHHHHHHhCC
Q 001586 150 ESQMIEHMQKLASMNKVYK---SFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGL 226 (1049)
Q Consensus 150 E~e~~~~~~~la~~n~~~~---~~lG~g~y~~~~p~~i~~~~~~~~~~~t~ytpyq~e~sqg~le~l~e~q~~ia~L~G~ 226 (1049)
|.||++|+++++.+|.... ..+|.|..+|..|.++.+...+. ...+.|+||.+..++|..+...++++.+++++|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~p~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~ 79 (398)
T cd00613 1 ETEVLRHLKRLASKNKALDQSMSFLGSGTYKHNPPAVIKRNILEN-EFYTAYTPYQPEISQGRLQALFELQTMLCELTGM 79 (398)
T ss_pred CHHHHHHHHHHHhcCcCcccCcccccccccCCcCcHHHHHHhccc-cCcccCCCCChhhhhhHHHHHHHHHHHHHHHHCC
Confidence 5699999999998887542 57888888899999987444444 4568899999999999999999999999999999
Q ss_pred CCcceEeccchHHHHHHHHHHhhhccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc--------chhhc-cCCC
Q 001586 227 PMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--------KDIDY-KSGD 297 (1049)
Q Consensus 227 ~~~n~sl~~~~Ta~~eA~~~a~~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~~--------~~l~~-l~~~ 297 (1049)
+..++.++.+++.++++++++.....++||+|++++..|+++...++...+..|++++.++. +++++ ++++
T Consensus 80 ~~~~v~~~~~g~~~~~~~~~~~~~~~~~gd~Vl~~~~~h~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~ 159 (398)
T cd00613 80 DVANASLQDEATAAAEAAGLAAIRAYHKRNKVLVPDSAHPTNPAVARTRGEPLGIEVVEVPSDEGGTVDLEALKEEVSEE 159 (398)
T ss_pred CccceeccCchHHHHHHHHHHHHhcccCCCEEEEcCccCcchHHHHHHhcccCCcEEEEeccCCCCCcCHHHHHHhcCCC
Confidence 87778888877766676665443332248999999999999999987765667788888765 34555 7889
Q ss_pred EeEEEEEcCCCCeeeccH-HHHHHHHHhCCcEEEEEeccccc-cCCCCCCcccceEEEecC-ccccccCCCCCCceEEEE
Q 001586 298 VCGVLVQYPGTEGEVLDY-GDFIKNAHANGVKVVMATDLLAL-TILKPPGELGADIVVGSA-QRFGVPMGYGGPHAAFLA 374 (1049)
Q Consensus 298 t~~V~v~~pn~~G~i~di-~~I~~~ah~~galliV~a~~~al-g~l~~p~~~GaDivvgs~-k~lg~P~~~GGP~~G~l~ 374 (1049)
|++|++++|+++|.+.|+ ++|+++||++|++++|+. ..+. ..+.+++++|+|++++++ |++ .|+|.|||++||++
T Consensus 160 t~~viv~~~~~~G~~~~~l~~i~~la~~~g~~livD~-~~~~~~~~~~~~~~~~d~~~~s~~K~~-~p~g~Ggp~~g~l~ 237 (398)
T cd00613 160 VAALMVQYPNTLGVFEDLIKEIADIAHSAGALVYVDG-DNLNLTGLKPPGEYGADIVVGNLQKTG-VPHGGGGPGAGFFA 237 (398)
T ss_pred eEEEEEECCCCCceecchHHHHHHHHHhcCCEEEEEe-ccccccCCCChHHcCCCEEEeeccccC-CCCCCCCCceeEEE
Confidence 999999999989999985 999999999999999953 2222 244567889999999999 666 99999999999999
Q ss_pred EchhHHhcCCCceeeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcchHHHHHHHHHHHH
Q 001586 375 TSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLA 454 (1049)
Q Consensus 375 ~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irrekaTsni~t~~~l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a 454 (1049)
+++++.+.+++..+|+..+..+.+.|.+.+..++.|.|||++|.|+++...+.+..++..+..++.+|++++.+++.+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~~~~~~~~~~~a~~~l~~~~~~g~~~~~~~~~~~~ 317 (398)
T cd00613 238 VKKELVRFLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKATSNICTGQALLALMAAMYIVYLGPEGLKEIAERAHLNA 317 (398)
T ss_pred EhhhhHhhCCCCeeccccccCCCcceEEecccchhhcccccccccceecHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 99999999999888875443344557777767778899999999999988887777777778889999999999999999
Q ss_pred HHHHHHhhcCCCeEEcCCCCcceEEEecC---C--HHHHHHHHHHcCCeeeee---cCCeEEEEeccCCCHHHHHHHHHH
Q 001586 455 GTFALGLKKLGTVEVQGLPFFDTVKVKCA---D--AHAIASAAYKIEMNLRVV---DSNTVTASFDETTTLEDVDKLFIV 526 (1049)
Q Consensus 455 ~~l~~~L~~~g~~~v~~~~~~~~v~i~~~---~--~~~v~~~L~~~gI~~~~~---~~~~vris~~~~~t~edid~lv~a 526 (1049)
++++++|+++++..+...+++..+.+.++ + +.++.++|.++||.+... ..+.+|+|++.+||++|||+++++
T Consensus 318 ~~l~~~L~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~L~~~gi~~~~~~~~~~~~lRis~~~~~t~edid~~~~~ 397 (398)
T cd00613 318 NYLAKRLKEVGGVLPFNGPFFHEFVLRLPPLYGIRAEDLAKALIDGGFHAPTMYLPVDGTLMIEPTETETKEELDALLEA 397 (398)
T ss_pred HHHHHHHHhcCCcccCCCCeeEEEEEEcCCcchHHHHHHHHhhhhcCccccccccCCCCeEEEEcCCCCCHHHHHHHHHh
Confidence 99999999986333233344455666655 3 578999999999987653 357899999999999999999987
Q ss_pred H
Q 001586 527 F 527 (1049)
Q Consensus 527 L 527 (1049)
|
T Consensus 398 L 398 (398)
T cd00613 398 L 398 (398)
T ss_pred C
Confidence 5
No 22
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=100.00 E-value=1.4e-33 Score=329.52 Aligned_cols=375 Identities=44% Similarity=0.660 Sum_probs=280.5
Q ss_pred HHHHHHHHHHHhccccCcCccccccccccccCcccccccccc--CcccccCCCCCchhhhhcHHHHHHHHHHHHHHhhCC
Q 001586 570 EHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVT--WPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGF 647 (1049)
Q Consensus 570 e~e~~~~l~~l~~~d~~~~~~~i~lGs~t~~~~~~~~~~~~~--~~~f~~~~P~~p~e~~~G~~~~i~el~~~la~l~G~ 647 (1049)
|+||++++++++++|...+.+++.+|.|.+.++.......+. ...+..|+||.+ ..+.|..++..++++++++++|.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~la~~~g~ 79 (398)
T cd00613 1 ETEVLRHLKRLASKNKALDQSMSFLGSGTYKHNPPAVIKRNILENEFYTAYTPYQP-EISQGRLQALFELQTMLCELTGM 79 (398)
T ss_pred CHHHHHHHHHHHhcCcCcccCcccccccccCCcCcHHHHHHhccccCcccCCCCCh-hhhhhHHHHHHHHHHHHHHHHCC
Confidence 579999999999999888878888888877665444432211 112334777776 66789999999999999999998
Q ss_pred Cc--cccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcC----CEEEEEcCCCCCCCCHHHHH
Q 001586 648 DS--FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCG----MKIVSVGTDAKGNINIEELR 721 (1049)
Q Consensus 648 ~~--~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G----~~Vv~V~~d~~g~iD~~~L~ 721 (1049)
+. +.+..++|++++ .++++++. .+ +++++|+++...|+.+...+...| ++++.+++++++.+|+++|+
T Consensus 80 ~~~~v~~~~~g~~~~~-~~~~~~~~---~~--~~gd~Vl~~~~~h~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~ 153 (398)
T cd00613 80 DVANASLQDEATAAAE-AAGLAAIR---AY--HKRNKVLVPDSAHPTNPAVARTRGEPLGIEVVEVPSDEGGTVDLEALK 153 (398)
T ss_pred CccceeccCchHHHHH-HHHHHHHh---cc--cCCCEEEEcCccCcchHHHHHHhcccCCcEEEEeccCCCCCcCHHHHH
Confidence 73 445555555555 34343332 11 147899999999999988877766 99999999777889999999
Q ss_pred HHHHhcCCCeEEEEEEcCCccccccccHHHHHHHHHHcCCEEEEeccccccccCcCCCCccCCcEEEeCCCcccccCCCC
Q 001586 722 KAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHLNLHKTFCIPHGG 801 (1049)
Q Consensus 722 ~~i~~~~~~taaV~it~Pn~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~Pg~~GaDi~~~s~hK~f~~P~g~ 801 (1049)
++++ ++|++|++++|+++|.+.+.+++|+++|+++|+++++|+++.... +...++.+++|++++++||++ +|+|+
T Consensus 154 ~~i~---~~t~~viv~~~~~~G~~~~~l~~i~~la~~~g~~livD~~~~~~~-~~~~~~~~~~d~~~~s~~K~~-~p~g~ 228 (398)
T cd00613 154 EEVS---EEVAALMVQYPNTLGVFEDLIKEIADIAHSAGALVYVDGDNLNLT-GLKPPGEYGADIVVGNLQKTG-VPHGG 228 (398)
T ss_pred HhcC---CCeEEEEEECCCCCceecchHHHHHHHHHhcCCEEEEEecccccc-CCCChHHcCCCEEEeeccccC-CCCCC
Confidence 9997 789999999998889987335999999999999999999865433 456778899999999999999 99999
Q ss_pred CCCceeEEEEcccccccCCCCccccCCCC----------C----CCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhh
Q 001586 802 GGPGMGPIGVKKHLAPFLPSHPVVSTGGI----------P----APEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (1049)
Q Consensus 802 GGPg~G~i~~~~~l~~~lpg~~vg~t~~~----------~----~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eG 867 (1049)
|||++|++++++++.+.+++...++..+. . ...+++.+.++.+ +....+..+|+++..++.+|
T Consensus 229 Ggp~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~~~---~~~~~~~~a~~~l~~~~~~g 305 (398)
T cd00613 229 GGPGAGFFAVKKELVRFLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKATSNICT---GQALLALMAAMYIVYLGPEG 305 (398)
T ss_pred CCCceeEEEEhhhhHhhCCCCeeccccccCCCcceEEecccchhhccccccccccee---cHHHHHHHHHHHHHHhCHHH
Confidence 99999999999888777765433321100 0 0012233444332 35566677888899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEE
Q 001586 868 LTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLM 946 (1049)
Q Consensus 868 l~~~~~~~~~~a~yL~~~L~~~-~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~p~~~~lr 946 (1049)
+.+..++..++++++.++|+++ ..... .++..+.+.++++.. .+.+..+++++|.++||++.....+..+.+|
T Consensus 306 ~~~~~~~~~~~~~~l~~~L~~~~~~~~~---~~~~~~~v~~~~~~~---~~~~~~~~~~~L~~~gi~~~~~~~~~~~~lR 379 (398)
T cd00613 306 LKEIAERAHLNANYLAKRLKEVGGVLPF---NGPFFHEFVLRLPPL---YGIRAEDLAKALIDGGFHAPTMYLPVDGTLM 379 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcccC---CCCeeEEEEEEcCCc---chHHHHHHHHhhhhcCccccccccCCCCeEE
Confidence 9999999999999999999885 22211 123444455665410 0235678999999999997654322358999
Q ss_pred EEccCCCCHHHHHHHHHHH
Q 001586 947 IEPTESESKEELDRYCDAL 965 (1049)
Q Consensus 947 i~~t~~~t~eeid~fv~aL 965 (1049)
++|+.++|++|||+++++|
T Consensus 380 is~~~~~t~edid~~~~~L 398 (398)
T cd00613 380 IEPTETETKEELDALLEAL 398 (398)
T ss_pred EEcCCCCCHHHHHHHHHhC
Confidence 9999999999999999875
No 23
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.9e-32 Score=317.40 Aligned_cols=358 Identities=19% Similarity=0.168 Sum_probs=274.4
Q ss_pred HHHHHHHHHhcC---CCccccccCCCCCCCCCcHHHHHHHHhCC-ccccccCCChhhHhhhHHHHHHHHHHHHHHHhCCC
Q 001586 152 QMIEHMQKLASM---NKVYKSFIGMGYYNTHVPPVILRNIMENP-AWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLP 227 (1049)
Q Consensus 152 e~~~~~~~la~~---n~~~~~~lG~g~y~~~~p~~i~~~~~~~~-~~~t~ytpyq~e~sqg~le~l~e~q~~ia~L~G~~ 227 (1049)
.+++.+..+... +..|.+.-+.+ ..|..+.+.+.+-- .|+...+......++...+.+.++|+.+++|+|++
T Consensus 7 ~~r~~fp~l~~~~~~~~vylD~aa~~----~~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~~a~ 82 (405)
T COG0520 7 AVRADFPALKREVGKPLVYLDNAATS----QKPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFLNAD 82 (405)
T ss_pred HHHhhCHHHhhccCCCeEEecCcccc----cCCHHHHHHHHHHHHhhcCCcCcccchHHHHHHHHHHHHHHHHHHHhCCC
Confidence 366666666544 23344433333 27877766655411 11222243444577788889999999999999999
Q ss_pred C-cceEeccchHHHHHHHHHHhhhccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCcc--------hhhc-cCCC
Q 001586 228 M-SNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK--------DIDY-KSGD 297 (1049)
Q Consensus 228 ~-~n~sl~~~~Ta~~eA~~~a~~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~~~--------~l~~-l~~~ 297 (1049)
+ .++.++.++|.++..+..++....++||+||+++.+|++++.+|+.+++..|+++++++++ +++. ++++
T Consensus 83 ~~~eIvft~~tT~aln~va~~l~~~~~~gdeIv~s~~EH~sn~~pw~~~~~~~Ga~v~~i~~~~~g~~~~~~~~~~i~~~ 162 (405)
T COG0520 83 SSDEIVFTRGTTEALNLVARGLGRSLKPGDEIVVSDLEHHSNIVPWQELAKRTGAKVRVIPLDDDGLLDLDALEKLITPK 162 (405)
T ss_pred CCCeEEEeCChhHHHHHHHHHhhhhhcCCCEEEEccCcchhhHHHHHHHHHhcCcEEEEEecCCCCCcCHHHHHHhcCCC
Confidence 5 8999999999666655544431124789999999999999999999998899999998863 3444 7899
Q ss_pred EeEEEEEc-CCCCeeeccHHHHHHHHHhCCcEEEEE-eccccccCC-CCCCcccceEEEecC-ccccccCCCCCCceEEE
Q 001586 298 VCGVLVQY-PGTEGEVLDYGDFIKNAHANGVKVVMA-TDLLALTIL-KPPGELGADIVVGSA-QRFGVPMGYGGPHAAFL 373 (1049)
Q Consensus 298 t~~V~v~~-pn~~G~i~di~~I~~~ah~~galliV~-a~~~alg~l-~~p~~~GaDivvgs~-k~lg~P~~~GGP~~G~l 373 (1049)
|++|.+++ +|.+|.+.|+++|+++||++|++++|+ +| +.+.+ .+..++|+|++++|+ |+|++|. |.|+|
T Consensus 163 Tklvais~vSn~tG~~~pv~~I~~la~~~ga~v~VDaaq--~~~h~~idv~~l~~Df~afsgHKwl~gP~-----GiGvL 235 (405)
T COG0520 163 TKLVALSHVSNVTGTVNPVKEIAELAHEHGALVLVDAAQ--AAGHLPIDVQELGCDFLAFSGHKWLLGPT-----GIGVL 235 (405)
T ss_pred ceEEEEECccccccccchHHHHHHHHHHcCCEEEEECcc--ccCccCCCchhcCCCEEEEcccccccCCC-----ceEEE
Confidence 99999987 699999999999999999999999994 44 44433 356899999999999 5476553 68999
Q ss_pred EEchhHHhcCCCceeeee-ecCCCC-cceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcchHHHHHHHHH
Q 001586 374 ATSQEYKRMMPGRIVGVS-IDSSGK-PALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVH 451 (1049)
Q Consensus 374 ~~~~~l~~~lpgrivG~s-~d~~g~-~~~~l~lqtreq~irrekaTsni~t~~~l~a~~aa~y~~~~g~~Gl~~ia~~~~ 451 (1049)
|+++++++.|+|...|+. .+.... ..+. ..+...|+|.||.|+ .+.+++.+|+ .++...|+++|.++++
T Consensus 236 y~r~~~l~~l~P~~~gg~~~~~~~~~~~~~----~~~~p~rfe~gTpn~---~~~i~l~aAl--~~~~~ig~~~i~~~e~ 306 (405)
T COG0520 236 YVRKELLEELEPFLGGGGMIEYVSRDEGVT----LAELPLRFEAGTPNI---AGAIGLAAAL--DYLLEIGMEAIEAHER 306 (405)
T ss_pred EEchHHHhhcCCcccCCCceeeeccccccc----ccCcchhhccCCchH---HHHHhHHHHH--HHHHHHhHHHHHHHHH
Confidence 999999999988888852 221111 1111 235667899999999 4666777776 7777888999999999
Q ss_pred HHHHHHHHHhhcCCCeEEcCCC---CcceEEEecCC--HHHHHHHHHHcCCeeeeec------------CCeEEEEeccC
Q 001586 452 GLAGTFALGLKKLGTVEVQGLP---FFDTVKVKCAD--AHAIASAAYKIEMNLRVVD------------SNTVTASFDET 514 (1049)
Q Consensus 452 ~~a~~l~~~L~~~g~~~v~~~~---~~~~v~i~~~~--~~~v~~~L~~~gI~~~~~~------------~~~vris~~~~ 514 (1049)
+++.|+.++|+++.++++++.+ ....++|++++ +.+++..|.++||.++.-. .+.+|+|++.|
T Consensus 307 ~L~~~~~~~L~~~~~v~i~g~~~~~r~~~vsF~v~~~~~~dv~~~L~~~gI~vr~g~~ca~p~~~~~~~~~~iR~S~~~Y 386 (405)
T COG0520 307 ELTEYLLEGLSELPGVEIYGPPDADRGGIVSFNVKGIHPHDVATLLDEKGIAVRAGHHCAQPLHRLLGVDATIRASLHLY 386 (405)
T ss_pred HHHHHHHHHHhcCCCeEEecCCcccCceEEEEEeCCCCHHHHHHHHHhCCeEEEeccccccHHHHhcCCCCceEEEEeec
Confidence 9999999999999669998643 45678888877 8999999999999876421 34599999999
Q ss_pred CCHHHHHHHHHHHhC
Q 001586 515 TTLEDVDKLFIVFAG 529 (1049)
Q Consensus 515 ~t~edid~lv~aL~~ 529 (1049)
||+||||+|+++|+.
T Consensus 387 Nt~edid~l~~aL~~ 401 (405)
T COG0520 387 NTEEDVDRLLEALKK 401 (405)
T ss_pred CCHHHHHHHHHHHHH
Confidence 999999999999963
No 24
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.96 E-value=1.4e-26 Score=271.65 Aligned_cols=343 Identities=16% Similarity=0.111 Sum_probs=250.5
Q ss_pred ccccccCCCCCCCCCcHHHHHHHHhCCcccccc--CCC--hhhHhhhHHHHHHHHHHHHHHHhCC-CCcceEeccchHHH
Q 001586 166 VYKSFIGMGYYNTHVPPVILRNIMENPAWYTQY--TPY--QAEIAQGRLESLLNFQTMIADLTGL-PMSNASLLDEGTAA 240 (1049)
Q Consensus 166 ~~~~~lG~g~y~~~~p~~i~~~~~~~~~~~t~y--tpy--q~e~sqg~le~l~e~q~~ia~L~G~-~~~n~sl~~~~Ta~ 240 (1049)
.|.++-+.+. .|..+.+.+.+ |+..+ .|. ....++-..+.+.++++.+|+++|. ++.++.+++|+|.+
T Consensus 25 iYld~a~~~~----~~~~v~~a~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~~ 97 (406)
T PRK09295 25 AYLDSAASAQ----KPSQVIDAEAE---FYRHGYAAVHRGIHTLSAQATEKMENVRKQAALFINARSAEELVFVRGTTEG 97 (406)
T ss_pred EEEeCccccc----CCHHHHHHHHH---HHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHcCcCCCCeEEEeCCHHHH
Confidence 5667667665 55555434332 22211 121 1224455677788999999999998 56789999999977
Q ss_pred HHHHHHHhhh-ccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc--------chhhc-cCCCEeEEEEEcC-CCC
Q 001586 241 AEAMAMCNNI-QKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--------KDIDY-KSGDVCGVLVQYP-GTE 309 (1049)
Q Consensus 241 ~eA~~~a~~~-~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~~--------~~l~~-l~~~t~~V~v~~p-n~~ 309 (1049)
+..++.++.. ..++||+||+++.+||++...|+.+++..|++++.++. +++++ ++++|++|++++| |++
T Consensus 98 l~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~t~lv~l~~~~n~t 177 (406)
T PRK09295 98 INLVANSWGNSNVRAGDNIIISEMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPALFDERTRLLAITHVSNVL 177 (406)
T ss_pred HHHHHHHhhhhcCCCcCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCCCCCCCHHHHHHhcCCCcEEEEEecchhcc
Confidence 7765544321 12378999999999999999888877888999988764 34555 7788999999997 789
Q ss_pred eeeccHHHHHHHHHhCCcEEEEEeccccccCCC-CCCcccceEEEecCccccccCCCCCCceEEEEEchhHHhcCCCcee
Q 001586 310 GEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIV 388 (1049)
Q Consensus 310 G~i~di~~I~~~ah~~galliV~a~~~alg~l~-~p~~~GaDivvgs~k~lg~P~~~GGP~~G~l~~~~~l~~~lpgriv 388 (1049)
|.+.|+++|+++||++|++++|+. ..+++... +..++|+|++++|++|+.+| +|.|++++++++.+.+|+...
T Consensus 178 G~~~~~~~i~~~~~~~~~~vivD~-a~~~g~~~~~~~~~~~D~~~~s~~K~~gp-----~G~G~l~~~~~~~~~~~~~~~ 251 (406)
T PRK09295 178 GTENPLAEMIALAHQHGAKVLVDG-AQAVMHHPVDVQALDCDFYVFSGHKLYGP-----TGIGILYVKEALLQEMPPWEG 251 (406)
T ss_pred cccCCHHHHHHHHHHcCCEEEEEc-ccccCccccCchhcCCCEEEeehhhccCC-----CCcEEEEEchHhHhhCCCccc
Confidence 999999999999999999999943 33454332 34678999999999556444 358999999999888988666
Q ss_pred eeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHhhcCCCeE
Q 001586 389 GVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVE 468 (1049)
Q Consensus 389 G~s~d~~g~~~~~l~lqtreq~irrekaTsni~t~~~l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~g~~~ 468 (1049)
|.+......... ....++...|+|.||.|+ .++.++.+|+ .++...|++++.+++.+++++++++|+++.+++
T Consensus 252 g~~~~~~~~~~~--~~~~~~~~~r~e~GT~~~---~~~~~l~~al--~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~~~~ 324 (406)
T PRK09295 252 GGSMIATVSLTE--GTTWAKAPWRFEAGTPNT---GGIIGLGAAL--DYVSALGLNNIAEYEQNLMHYALSQLESVPDLT 324 (406)
T ss_pred CCceeeeeecCC--ccccCCchhhcCCCCccH---HHHHHHHHHH--HHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEE
Confidence 543210000000 011123445788999998 4667777776 556566899999999999999999999885588
Q ss_pred EcCC-CCcceEEEecCC--HHHHHHHHHHcCCeeeee------------cCCeEEEEeccCCCHHHHHHHHHHHh
Q 001586 469 VQGL-PFFDTVKVKCAD--AHAIASAAYKIEMNLRVV------------DSNTVTASFDETTTLEDVDKLFIVFA 528 (1049)
Q Consensus 469 v~~~-~~~~~v~i~~~~--~~~v~~~L~~~gI~~~~~------------~~~~vris~~~~~t~edid~lv~aL~ 528 (1049)
++.+ .....++|.+++ +.++.+.|.++||.++.- .++.+|+|++.+||++|||+|+++|+
T Consensus 325 ~~~~~~~~~iv~~~~~~~~~~~~~~~L~~~gI~v~~g~~c~~~~~~~~~~~~~iRiS~~~ynt~~did~l~~~l~ 399 (406)
T PRK09295 325 LYGPQNRLGVIAFNLGKHHAYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVDRLVAGLQ 399 (406)
T ss_pred EeCCCCCceEEEEEECCcCHHHHHHHHHhCCeEEeccccchHHHHHHHCCCCEEEEEccCCCCHHHHHHHHHHHH
Confidence 8753 233467777765 678999999999987531 13579999999999999999999996
No 25
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=99.96 E-value=1.3e-26 Score=258.13 Aligned_cols=410 Identities=14% Similarity=0.188 Sum_probs=294.7
Q ss_pred CCCcccCCCCCHHHHHHHHHHHhccccCcCcccccccccccc--CccccccccccCcccccCCCCCchhhhhcHHHHHHH
Q 001586 559 LTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMK--LNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNN 636 (1049)
Q Consensus 559 ~~~p~~~~~~se~e~~~~l~~l~~~d~~~~~~~i~lGs~t~~--~~~~~~~~~~~~~~f~~~~P~~p~e~~~G~~~~i~e 636 (1049)
-++| .++++.+++++.++.....|--+..+. -|+.++ .+...+.+...... +||.++ +.+++..++..|
T Consensus 54 ~~lP--~~gl~~d~v~~~i~~~~~ld~~~~~~~---vS~~v~~~~~~~~~l~~~~~~k---~N~l~~-d~fp~~~~~e~~ 124 (491)
T KOG1383|consen 54 FTLP--SKGLPKDAVLELINDELMLDGNPRLGL---ASGVVYWGEPELDKLIMEAYNK---FNPLHP-DEFPVVRKLEAE 124 (491)
T ss_pred ecCC--CCCCCHHHHHHHHHHHhccCCCcccCe---eeEEEecCCcchhhHHHHHHhh---cCccCc-cccchhHHHHHH
Confidence 3678 689999999999998877665433222 233332 22333333222233 478888 999999999999
Q ss_pred HHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHh----cCCCCCCEEEEcCCCCCccHHHHHhcCCEEEEEcCC-C
Q 001586 637 LGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKA----RGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTD-A 711 (1049)
Q Consensus 637 l~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~----~G~~~r~~VLip~saHg~~pa~a~~~G~~Vv~V~~d-~ 711 (1049)
...|+|.|++.+.. -++..++.+.++++++.+.|+.. +|. .++.++++.+.|....+++.+++++++.||++ .
T Consensus 125 ~Vnm~~~L~~~~~~-~~g~~t~G~Ses~l~~~k~~~~~r~~~k~I-~~p~iv~~~~v~~a~eK~a~yf~v~l~~V~~~~~ 202 (491)
T KOG1383|consen 125 CVNMIANLFNAPSD-SCGCGTVGGSESGLAAKKSYRNRRKAQKGI-DKPNIVTPQNVHAAFEKAARYFEVELREVPLDEG 202 (491)
T ss_pred HHHHHHHHhcCCcc-ccCccccccchHHHHHHHHHHHHHHhccCC-CCccccchHHHHHHHHHHHhhEEEEEEeeecccc
Confidence 99999999998754 33333444556888888887652 344 34678899999999999999999999999998 5
Q ss_pred CCCCCHHHHHHHHHhcCCCeEEEEEEcCCc-cccccccHHHHHHHHHH-cCCEEEEeccccccccCcCCC-Ccc------
Q 001586 712 KGNINIEELRKAAEANRDNLSTLMVTYPST-HGVYEEGIDEICKIIHD-NGGQVYMDGANMNAQVGLTSP-GYI------ 782 (1049)
Q Consensus 712 ~g~iD~~~L~~~i~~~~~~taaV~it~Pn~-~G~i~~di~eI~~lah~-~G~ll~vD~A~~~a~~gl~~P-g~~------ 782 (1049)
+.++|+..+.+.++ +||++|+.+.|++ +|.++ |+++|.++.-+ +++++|||+| .|||..| +..
T Consensus 203 ~~~~D~~k~~~~i~---eNti~lv~~~~~~p~G~~e-~ve~l~~l~~e~w~ipiHvDa~----~GgFi~p~~~~~~~~fd 274 (491)
T KOG1383|consen 203 DYRVDPGKVVRMID---ENTIMLVGSLPNFPTGEIE-DVEKLADLLLEIWDIPIHVDAC----LGGFINPAGYLNEEEFD 274 (491)
T ss_pred ceEecHHHHHHHhc---cceEEEEEEcCCCCccchh-hHHHHHHHHHHHhCCceeeccc----CccccccccccCccccc
Confidence 68999999999998 8999999999986 99999 89999999999 9999999975 7888776 321
Q ss_pred ----CCcEEEeCCCcccccCCCCCCCceeEEEEccc-ccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHH
Q 001586 783 ----GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH-LAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISY 857 (1049)
Q Consensus 783 ----GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~-l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~ 857 (1049)
|.-.+..+.||. |+--+|++++.-+.+ +.+. ..+- ..+ +-|..+++..+..+..| +..+++|
T Consensus 275 Fr~p~V~Sisa~~HKY-----Gl~~~G~~~vl~r~k~~~~~---q~~~-~~~--w~Gg~y~s~TlngSR~g--~~va~~w 341 (491)
T KOG1383|consen 275 FRVPGVTSISADGHKY-----GLAPAGSSWVLYRNKELLPH---QLFF-HTD--WLGGIYASPTLNGSRPG--SQVAAQW 341 (491)
T ss_pred cCCCCceeEeecccee-----eeeecCcEEEEEcccccccc---eEEE-ecc--ccCccccCcccccCCcc--cHHHHHH
Confidence 233445566774 222346666655532 2211 0000 000 11223344444433222 4567799
Q ss_pred HHHHHHchhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHHHCCcccCCC
Q 001586 858 TYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTM 937 (1049)
Q Consensus 858 a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~ 937 (1049)
+.|..+|.+||++.++++++++.+|+++|+++-.+..-|+ |.. .| +.+.+ ...+..++.+.|.++||+++.+
T Consensus 342 a~~~~lG~eGY~~~~~~ive~~~~l~egie~i~~i~i~gk--p~v-s~-~~~~s----~~~~i~elsd~l~~~GW~lnal 413 (491)
T KOG1383|consen 342 AALMSLGEEGYRENTQNIVETARKLREGIENIKGIKIVGK--PLV-SF-ILFGS----NDVNIFELSDLLRKKGWILNAL 413 (491)
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHHHhhhccccceecCC--CcE-EE-EEccC----CccchhhhhHHHHhcCcCcccc
Confidence 9999999999999999999999999999998733322232 322 12 22221 2467889999999999999999
Q ss_pred CCCCCCEEEEEccCCCCHHH-HHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCccccccchhhHHHHHhHHHhh
Q 001586 938 SWPVPGTLMIEPTESESKEE-LDRYCDALISIREEIAQIENGKADIHNNVLKVTCLFLHHGYFFSYIVKEINICI 1011 (1049)
Q Consensus 938 ~~p~~~~lri~~t~~~t~ee-id~fv~aL~~i~~~i~~i~~g~~~~~~~~l~~~ph~~~~~~~~~~~~~~~~~~~ 1011 (1049)
++| ..+++|+|..+..++ .|+|+.+++++++++... .+....+...+++....+++|.++.+++.-.+..+
T Consensus 414 q~P--~a~Hi~vt~~~~~~~~A~~~v~Di~~~~~el~~~-p~~~~~~~~a~yg~a~~~~~~~~~~e~~~~~~d~~ 485 (491)
T KOG1383|consen 414 QFP--AAIHICVTRVHAREDVADRFVADIRKVVEELKSL-PESKTHGMAAIYGLAQKTPDRSVVDELIVGFLDSV 485 (491)
T ss_pred CCC--CceEEEEEeeeccHHHHHHHHHHHHHHHHHHHhC-CCcccCcccchhhhhhcCCchhhHHHHHHHHHHhh
Confidence 887 488999998887777 499999999999999874 34344455888888889999888887777665544
No 26
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.96 E-value=1.4e-26 Score=267.91 Aligned_cols=358 Identities=18% Similarity=0.241 Sum_probs=244.9
Q ss_pred CCCHHHHHHHHHHHhccccCcCcccccccc-ccccCccccccccccCcccccCCCCCchhhhhcHHHHHHHHHHHHHHhh
Q 001586 567 YHTEHELLRYIHLLQSKELSLCHSMIPLGS-CTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTIT 645 (1049)
Q Consensus 567 ~~se~e~~~~l~~l~~~d~~~~~~~i~lGs-~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~~G~~~~i~el~~~la~l~ 645 (1049)
+++|+||+++|+++.++|+++.+ | ||+ ||+..+...+.+. ++...++..+ ...++..+++.++++++++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~a~~----~~~~~~~~~~-~~~~~~~~~~~~~~~~la~~~ 72 (371)
T PRK13520 1 GLSEEEILEELEEYRSEDLKYER--I-LSSMCTEPHPIARKAHE----MFLETNLGDP-GLFPGTAKLEEEAVEMLGELL 72 (371)
T ss_pred CCCHHHHHHHHHHHHhcCCCHHH--e-eeeeecCchHHHHHHHH----HHHhcCCCCc-ccCccHHHHHHHHHHHHHHHh
Confidence 47999999999999999999864 4 887 7776665444432 1111111111 113467788889999999999
Q ss_pred CCCcc-ccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCEEEEEcCCCCCCCCHHHHHHHH
Q 001586 646 GFDSF-SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAA 724 (1049)
Q Consensus 646 G~~~~-~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~Vv~V~~d~~g~iD~~~L~~~i 724 (1049)
|++.. .+..++|++++..++.+++. . +.+++++||++...|.+....++..|++++.+|.++++.+|+++|++++
T Consensus 73 g~~~~~~~~~~ggt~a~~~a~~~~~~---~-~~~~~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i 148 (371)
T PRK13520 73 HLPDAYGYITSGGTEANIQAVRAARN---L-AKAEKPNIVVPESAHFSFDKAADMLGVELRRAPLDDDYRVDVKAVEDLI 148 (371)
T ss_pred CCCCCCeEEecCcHHHHHHHHHHHHh---h-ccCCCceEEecCcchHHHHHHHHHcCceEEEecCCCCCcCCHHHHHHHH
Confidence 98763 34556666655444433332 1 1124578999988887777777889999999999888999999999999
Q ss_pred HhcCCCeEEEEEEcCC-ccccccccHHHHHHHHHHcCCEEEEeccccccccCcCC--C----CccCCcEEEeCCCccccc
Q 001586 725 EANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTS--P----GYIGADVCHLNLHKTFCI 797 (1049)
Q Consensus 725 ~~~~~~taaV~it~Pn-~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~--P----g~~GaDi~~~s~hK~f~~ 797 (1049)
+ +++++|++++++ .+|.+. |+++|+++||++|++++||+++.....++.. + ...++|.+.+++||+...
T Consensus 149 ~---~~~~~vi~~~~~~~tG~~~-~l~~I~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~~vd~~~~s~~K~~~a 224 (371)
T PRK13520 149 D---DNTIGIVGIAGTTELGQVD-PIPELSKIALENGIFLHVDAAFGGFVIPFLDDPPNFDFSLPGVDSITIDPHKMGLA 224 (371)
T ss_pred h---hCCEEEEEEcCCcCCcccC-CHHHHHHHHHHcCCCEEEEecchhHHHHhhcCCCCccccCCCCceEEECCccccCc
Confidence 7 678778777774 589998 7999999999999999999987422211111 1 135889999999997532
Q ss_pred CCCCCCCceeEEEE-cccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHH
Q 001586 798 PHGGGGPGMGPIGV-KKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAI 876 (1049)
Q Consensus 798 P~g~GGPg~G~i~~-~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~ 876 (1049)
|.+.|++++ ++++...+......... .......++. .+ ..+..+++.+..++.+|+.+..++..
T Consensus 225 -----~~~~G~~~~~~~~~~~~l~~~~~~~~~-----~~~~~~~gt~---~~--~~~~~~~~al~~l~~~g~~~~~~~~~ 289 (371)
T PRK13520 225 -----PIPAGGILFRDESYLDALAVDTPYLTS-----KKQATLTGTR---SG--AGVAATYAVMKYLGREGYRKVVERCM 289 (371)
T ss_pred -----cCCceEEEEcCHHHHHhhcccCccccC-----CCCcceEeec---cC--hHHHHHHHHHhhhcHhHHHHHHHHHH
Confidence 223444444 44454443210000000 0000011111 11 22455778888889999988889999
Q ss_pred HHHHHHHHHHhcc-CCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEccCCCCH
Q 001586 877 LNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESK 955 (1049)
Q Consensus 877 ~~a~yL~~~L~~~-~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~ 955 (1049)
++++++.++|+++ +++.+ . +..+.+.++++ +..++.++|.++||.+..... ++++|++++..+|+
T Consensus 290 ~~~~~l~~~L~~~g~~~~~-~---~~~~~v~~~~~--------~~~~v~~~L~~~gi~v~~~~~--~~~iRis~~~~~t~ 355 (371)
T PRK13520 290 ENTRWLAEELKERGFEPVI-E---PVLNIVAFDDP--------NPDEVREKLRERGWRVSVTRC--PEALRIVCMPHVTR 355 (371)
T ss_pred HHHHHHHHHHHhCCCEEec-C---CCceEEEEecC--------CHHHHHHHHHHCCceeccCCC--CCEEEEEEECCCCH
Confidence 9999999999875 44322 2 22233445542 467899999999998865432 46899999999999
Q ss_pred HHHHHHHHHHHHHH
Q 001586 956 EELDRYCDALISIR 969 (1049)
Q Consensus 956 eeid~fv~aL~~i~ 969 (1049)
+|+|+|+++|++++
T Consensus 356 edi~~~~~~l~~~~ 369 (371)
T PRK13520 356 EHIENFLEDLKEVK 369 (371)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999998765
No 27
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=99.95 E-value=2.5e-26 Score=266.33 Aligned_cols=314 Identities=19% Similarity=0.221 Sum_probs=227.9
Q ss_pred hcHHHHHHHHHHHHHHhhCCCc-cccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHH----HHhcCC
Q 001586 628 QGYQEMFNNLGEWLCTITGFDS-FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGM 702 (1049)
Q Consensus 628 ~G~~~~i~el~~~la~l~G~~~-~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~----a~~~G~ 702 (1049)
+-..+.+++.++.+++++|.+. ..+..+.+++ ++..+..+.|... .+++|+||++...|.+|... ++..|+
T Consensus 62 ~~~t~~~e~aRe~va~~~~a~~~~eIvft~~tT--~aln~va~~l~~~--~~~gdeIv~s~~EH~sn~~pw~~~~~~~Ga 137 (405)
T COG0520 62 EEATDLYEAAREAVARFLNADSSDEIVFTRGTT--EALNLVARGLGRS--LKPGDEIVVSDLEHHSNIVPWQELAKRTGA 137 (405)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCCeEEEeCChh--HHHHHHHHHhhhh--hcCCCEEEEccCcchhhHHHHHHHHHhcCc
Confidence 3345678899999999999984 4443333332 1334444444211 13569999999999988664 455799
Q ss_pred EEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-ccccccccHHHHHHHHHHcCCEEEEeccccccccCcCCCCc
Q 001586 703 KIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGY 781 (1049)
Q Consensus 703 ~Vv~V~~d~~g~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~Pg~ 781 (1049)
+|+++|.+++|.+|+++++.+++ ++|++|.+++.+ .+|.+. |+++|+++||++|++++||++|..+...+ ...+
T Consensus 138 ~v~~i~~~~~g~~~~~~~~~~i~---~~Tklvais~vSn~tG~~~-pv~~I~~la~~~ga~v~VDaaq~~~h~~i-dv~~ 212 (405)
T COG0520 138 KVRVIPLDDDGLLDLDALEKLIT---PKTKLVALSHVSNVTGTVN-PVKEIAELAHEHGALVLVDAAQAAGHLPI-DVQE 212 (405)
T ss_pred EEEEEecCCCCCcCHHHHHHhcC---CCceEEEEECccccccccc-hHHHHHHHHHHcCCEEEEECccccCccCC-Cchh
Confidence 99999999889999999999887 899999999985 599998 79999999999999999999987555443 4567
Q ss_pred cCCcEEEeCCCcccccCCCCCCC-ceeEEEEcccccccCCCCcccc-CCCC-----------CCCCCCCCCCCCCccchh
Q 001586 782 IGADVCHLNLHKTFCIPHGGGGP-GMGPIGVKKHLAPFLPSHPVVS-TGGI-----------PAPEKSQPLGTIAAAPWG 848 (1049)
Q Consensus 782 ~GaDi~~~s~hK~f~~P~g~GGP-g~G~i~~~~~l~~~lpg~~vg~-t~~~-----------~~~~~~~~t~~i~sa~~g 848 (1049)
+|+|++++|+|||+ +|| |+|++++++++.+.+++...|. ..+. ..+..+.+|.++..
T Consensus 213 l~~Df~afsgHKwl------~gP~GiGvLy~r~~~l~~l~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~---- 282 (405)
T COG0520 213 LGCDFLAFSGHKWL------LGPTGIGVLYVRKELLEELEPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAG---- 282 (405)
T ss_pred cCCCEEEEcccccc------cCCCceEEEEEchHHHhhcCCcccCCCceeeecccccccccCcchhhccCCchHHH----
Confidence 89999999999998 467 9999999998887774433332 1110 11123444444432
Q ss_pred hHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCC-ceeeEEEEeccCccccCCCCHHHHHHHH
Q 001586 849 SALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNG-TVAHEFIVDLRGLKNTAGIEPEDVAKRL 927 (1049)
Q Consensus 849 ~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~~~v~~~g~~g-~~~~e~iv~~~~~~~~~g~~~~~v~k~L 927 (1049)
...+. +.++.+...|+.++.++..+++.|+.++|+++..+..-|+.. .....+.|.++ ++++.++++.|
T Consensus 283 -~i~l~---aAl~~~~~ig~~~i~~~e~~L~~~~~~~L~~~~~v~i~g~~~~~r~~~vsF~v~------~~~~~dv~~~L 352 (405)
T COG0520 283 -AIGLA---AALDYLLEIGMEAIEAHERELTEYLLEGLSELPGVEIYGPPDADRGGIVSFNVK------GIHPHDVATLL 352 (405)
T ss_pred -HHhHH---HHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCcccCceEEEEEeC------CCCHHHHHHHH
Confidence 22223 334455555677888889999999999999874332223321 12333555554 67899999999
Q ss_pred HHCCcccCCCC---CC------CCCEEEEEccCCCCHHHHHHHHHHHHHHHH
Q 001586 928 MDYGFHGPTMS---WP------VPGTLMIEPTESESKEELDRYCDALISIRE 970 (1049)
Q Consensus 928 ~~~Gi~~~~~~---~p------~~~~lri~~t~~~t~eeid~fv~aL~~i~~ 970 (1049)
.++||.++... .| +.+++|+|+..++|++|||+|+++|+++.+
T Consensus 353 ~~~gI~vr~g~~ca~p~~~~~~~~~~iR~S~~~YNt~edid~l~~aL~~~~~ 404 (405)
T COG0520 353 DEKGIAVRAGHHCAQPLHRLLGVDATIRASLHLYNTEEDVDRLLEALKKALA 404 (405)
T ss_pred HhCCeEEEeccccccHHHHhcCCCCceEEEEeecCCHHHHHHHHHHHHHHhh
Confidence 99998876422 12 346699999999999999999999998753
No 28
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.95 E-value=1.6e-26 Score=267.81 Aligned_cols=326 Identities=22% Similarity=0.215 Sum_probs=244.0
Q ss_pred CCcHHHHHHHHhCCcccccc--CC--ChhhHhhhHHHHHHHHHHHHHHHhCCCC-cceEeccchHHHHHHHHHHhhhccC
Q 001586 179 HVPPVILRNIMENPAWYTQY--TP--YQAEIAQGRLESLLNFQTMIADLTGLPM-SNASLLDEGTAAAEAMAMCNNIQKG 253 (1049)
Q Consensus 179 ~~p~~i~~~~~~~~~~~t~y--tp--yq~e~sqg~le~l~e~q~~ia~L~G~~~-~n~sl~~~~Ta~~eA~~~a~~~~~~ 253 (1049)
.+|..+.+.+.+. +..+ +| .....++...+.+.++++.+++++|++. .++.+..++|.+++.++.++....+
T Consensus 10 ~~p~~v~~a~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~lg~~~~~~v~~~~~~t~a~~~~~~~l~~~~~ 86 (371)
T PF00266_consen 10 PMPKSVLEAISDY---LRNFYANPHSGVSHRSREFAEILEEAREALAKLLGAPPDEEVVFTSNGTEALNAVASSLLNPLK 86 (371)
T ss_dssp B-BHHHHHHHHHH---HHHSGSSTSTSSSTTSHHHHHHHHHHHHHHHHHHTSSTTEEEEEESSHHHHHHHHHHHHHHHGT
T ss_pred CCCHHHHHHHHHH---HHHhhhcCcccccchhhhhhHHHHHHHHHHHHhcCCccccccccccccchhhhhhhhccccccc
Confidence 3788887666542 1111 33 1223456677888999999999999998 8899999999888887777632123
Q ss_pred CCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc--------chhhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHH
Q 001586 254 KKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--------KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAH 323 (1049)
Q Consensus 254 ~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~~--------~~l~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah 323 (1049)
++++|+++..+|+++..+|+..++..|+++++++. +++++ +++++++|++++- |.+|.+.|+++|+++||
T Consensus 87 ~g~~vl~~~~~~~s~~~~~~~~~~~~g~~v~~i~~~~~~~~~~~~~~~~l~~~~~lv~~~~~~~~tG~~~pi~~I~~~~~ 166 (371)
T PF00266_consen 87 PGDEVLVTSNEHPSNRYPWEEIAKRKGAEVRVIPADPGGSLDLEDLEEALNPDTRLVSISHVENSTGVRNPIEEIAKLAH 166 (371)
T ss_dssp TTCEEEEEESSHHHHHHHHHHHHHHTTEEEEEEEEGTTSSCSHHHHHHHHHTTESEEEEESBETTTTBBSSHHHHHHHHH
T ss_pred cccccccccccccccccccccccccchhhhccccccccchhhhhhhhhhhccccceEEeecccccccEEeeeceehhhhh
Confidence 88999999999999999999888788999998865 24555 7899999999875 88999999999999999
Q ss_pred hCCcEEEEEeccccccCC-CCCCcccceEEEecCccccccCCCCCCceEEEEEchhHHhcCCCceeeee-ecCCCCccee
Q 001586 324 ANGVKVVMATDLLALTIL-KPPGELGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVS-IDSSGKPALR 401 (1049)
Q Consensus 324 ~~galliV~a~~~alg~l-~~p~~~GaDivvgs~k~lg~P~~~GGP~~G~l~~~~~l~~~lpgrivG~s-~d~~g~~~~~ 401 (1049)
++|++++|++ ..++|.+ .+..++|+|++++|+|||++| ||+|++++++++.+++.+...|+. .+. ..
T Consensus 167 ~~~~~~~vD~-~~~~g~~~id~~~~~~D~~~~s~~Kl~gp-----~G~g~l~v~~~~~~~~~p~~~~~~~~~~-----~~ 235 (371)
T PF00266_consen 167 EYGALLVVDA-AQSAGCVPIDLDELGADFLVFSSHKLGGP-----PGLGFLYVRPEAIERLRPAKPGGGYLDF-----PS 235 (371)
T ss_dssp HTTSEEEEE--TTTTTTSS--TTTTTESEEEEESTSTTSS-----STEEEEEEEHHHHHHHHTSSSSSSTTTH-----HH
T ss_pred ccCCceeEec-hhccccccccccccccceeeecccccCCC-----Cchhhheehhhhhhcccccccccccccc-----cc
Confidence 9999999943 3456544 356789999999999558644 679999999999888866666642 110 00
Q ss_pred ee-cccccccccccccCCCccchhHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEcCC----CCcc
Q 001586 402 VA-MQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL----PFFD 476 (1049)
Q Consensus 402 l~-lqtreq~irrekaTsni~t~~~l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~g~~~v~~~----~~~~ 476 (1049)
+. ........|++.||.|+ ..++++..++ .++...|++++.+|+.++++++.+.|+++++++++++ ....
T Consensus 236 ~~~~~~~~~~~~~~~GT~~~---~~~~~l~~al--~~~~~~g~~~i~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~ 310 (371)
T PF00266_consen 236 LQEYGLADDARRFEGGTPNV---PAIYALNEAL--KLLEEIGIERIRERIRELAEYLREALEELPGIEVLGPDDEPRRPS 310 (371)
T ss_dssp HHHHCHHSTTTGSSSSS--H---HHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTEEESSSSCGGBGTT
T ss_pred chhcccccccccccccceee---ehhhhHHHHH--hhhhccccccchhhhhhHHHHHHhhhhcCCceeEeeecccccccc
Confidence 00 00123445667889998 4556666665 5556779999999999999999999999976888652 1234
Q ss_pred eEEEecCC--HHHHHHHHHHcCCeeeee--c----------CCeEEEEeccCCCHHHHHHH
Q 001586 477 TVKVKCAD--AHAIASAAYKIEMNLRVV--D----------SNTVTASFDETTTLEDVDKL 523 (1049)
Q Consensus 477 ~v~i~~~~--~~~v~~~L~~~gI~~~~~--~----------~~~vris~~~~~t~edid~l 523 (1049)
.++|.+++ +.++.+.|.++||.++.- . .+.||+|++.+||++|||+|
T Consensus 311 i~~~~~~~~~~~~~~~~L~~~~I~~~~G~~~~~~~~~~~~~~~~iRvS~~~~nt~~dv~~l 371 (371)
T PF00266_consen 311 IVSFNLPGSDADDVVKYLEERGIAVSTGSACAGPSLDILGMGGVIRVSLHYYNTEEDVDRL 371 (371)
T ss_dssp EEEEEETTSSHHHHHHHHHHHTEEEEESTTTCHHHHHHHHTTTEEEEE-GTTSSHHHHHHH
T ss_pred eEEEeecCCCHHHHHHHHhhcCEEEeccCcccHHHHHHhCCCCEEEEeccCCCCHHHHhhC
Confidence 57777766 889999999999987651 1 38999999999999999987
No 29
>PLN03032 serine decarboxylase; Provisional
Probab=99.95 E-value=1.7e-25 Score=256.57 Aligned_cols=296 Identities=17% Similarity=0.219 Sum_probs=213.3
Q ss_pred cHHHHHHHHHHHHHHhhCCCccc---cccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCEEE
Q 001586 629 GYQEMFNNLGEWLCTITGFDSFS---LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIV 705 (1049)
Q Consensus 629 G~~~~i~el~~~la~l~G~~~~~---l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~Vv 705 (1049)
...+++.++.+++++++|++... ++.++|++++ +++++.+++. .++.+|+++..+|.+..++++..|++++
T Consensus 63 ~a~~~e~~v~~~ia~llg~~~~~~~G~fTsGGTEaN---l~al~~ar~~---~~~~~vi~s~~~H~Sv~kaa~~lg~~~~ 136 (374)
T PLN03032 63 HSRQFEVGVLDWFARLWELEKDEYWGYITTCGTEGN---LHGILVGREV---FPDGILYASRESHYSVFKAARMYRMEAV 136 (374)
T ss_pred cHHHHHHHHHHHHHHHhCCCCccCCEEEeCchHHHH---HHHHHHHHHh---CCCcEEEeCCCceeHHHHHHHHcCCCCe
Confidence 56899999999999999997643 4445555555 5555443322 1235789999999999999999999999
Q ss_pred EEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCCc-cccccccHHHHHHHHHHcC-----CEEEEeccccccccCcC--
Q 001586 706 SVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPST-HGVYEEGIDEICKIIHDNG-----GQVYMDGANMNAQVGLT-- 777 (1049)
Q Consensus 706 ~V~~d~~g~iD~~~L~~~i~~~~~~taaV~it~Pn~-~G~i~~di~eI~~lah~~G-----~ll~vD~A~~~a~~gl~-- 777 (1049)
.||+|++|.+|+++|+++|++...++.+|+++..|+ +|.++ ||++|+++|+++| +++|||+|+..+...+.
T Consensus 137 ~V~~d~~g~id~~~L~~~i~~~~~~~~lvv~tagtt~tG~id-pi~eI~~i~~~~g~~~~~~~lHvDaA~gg~~~p~~~~ 215 (374)
T PLN03032 137 KVPTLPSGEIDYDDLERALAKNRDKPAILNVNIGTTVKGAVD-DLDRILRILKELGYTEDRFYIHCDGALFGLMMPFVSR 215 (374)
T ss_pred EeeeCCCCcCcHHHHHHHHHHcCCCCEEEEEEecCcCCccCC-CHHHHHHHHHHhCCCCCCeeEEEEccchhhhhhccCC
Confidence 999999999999999999985434688898988865 99999 7999999999997 48999998643333321
Q ss_pred CC---CccCCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHH
Q 001586 778 SP---GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILP 854 (1049)
Q Consensus 778 ~P---g~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~ 854 (1049)
.| +..++|.+++|+||+++.|. |+|++++++.+...+......... ... .+..+. ++..++
T Consensus 216 ~~~~~~~~~vDSis~s~HK~~g~P~-----g~G~ll~r~~~~~~~~~~~~Yl~~------~d~---ti~gSR--~g~~~l 279 (374)
T PLN03032 216 APEVTFRKPIGSVSVSGHKFLGCPM-----PCGVALTRKKHVKALSQNVEYLNS------RDA---TIMGSR--NGHAPL 279 (374)
T ss_pred CcccCCCcCCcEEEECcccccCCCc-----CeEEEEEEchhhHhhccCCcccCC------CCC---cccCCC--chHHHH
Confidence 11 23479999999999875453 567899987655443211100000 011 111111 123456
Q ss_pred HHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHHHCCcc
Q 001586 855 ISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFH 933 (1049)
Q Consensus 855 ~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~-~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~ 933 (1049)
..|+.|+.+|.+|+++.+++++++|+|+.++|++. +.+.. + |....++|..+ ..+ .+ .+||+
T Consensus 280 ~~w~~l~~~G~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~-~---p~~~~V~f~~~--------~~~----~~-~~~w~ 342 (374)
T PLN03032 280 YLWYTLRRKGYRGIKRDVQHCMRNAHYLKDRLTEAGLTCRL-N---ELSSTVVFERP--------MDE----AF-IKKWQ 342 (374)
T ss_pred HHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEE-C---CCceEEEEcCC--------CcH----hH-hheee
Confidence 78999999999999999999999999999999886 55432 2 33333444432 111 12 26898
Q ss_pred cCCCCCCCCCEEEEEccCCCCHHHHHHHHHHHHHH
Q 001586 934 GPTMSWPVPGTLMIEPTESESKEELDRYCDALISI 968 (1049)
Q Consensus 934 ~~~~~~p~~~~lri~~t~~~t~eeid~fv~aL~~i 968 (1049)
+.+. .+.+++++++..+++.+|+|+++|+++
T Consensus 343 l~~~----~~~~hi~vm~~~~~~~id~fi~dl~~~ 373 (374)
T PLN03032 343 LACE----GDIAHVVVMPNVTVEKLDEFVEELVEV 373 (374)
T ss_pred eccc----CCEEEEEECCCCCHHHHHHHHHHHhcc
Confidence 8754 368999999999999999999999764
No 30
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.95 E-value=2.4e-25 Score=260.56 Aligned_cols=356 Identities=17% Similarity=0.103 Sum_probs=251.7
Q ss_pred HHHHHHHHHhcCCCccccccCCCCCCCCCcHHHHHHHHhCC-ccc--cccCCChhhHhhhHHHHHHHHHHHHHHHhCCC-
Q 001586 152 QMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENP-AWY--TQYTPYQAEIAQGRLESLLNFQTMIADLTGLP- 227 (1049)
Q Consensus 152 e~~~~~~~la~~n~~~~~~lG~g~y~~~~p~~i~~~~~~~~-~~~--t~ytpyq~e~sqg~le~l~e~q~~ia~L~G~~- 227 (1049)
+++.++..+. ++..|.+.-+.|. +|..+.+.+.+-- .+. ..+.+| ..++-..+.+.++++.+++++|++
T Consensus 5 ~~r~~fp~l~-~~~iyld~a~~~~----~p~~v~~a~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~r~~la~~~g~~~ 77 (398)
T TIGR03392 5 QFRQQFPALQ-DGTVYLDSAATAL----KPQAVIDATQQFYRLSSGTVHRSQH--QQAQSLTARYELARQQVARFLNAPD 77 (398)
T ss_pred HHHHhCCccC-CCeEEeeCccccC----CCHHHHHHHHHHHHhcCCCCCCccc--HHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 3444444332 2456666666665 5555544443210 011 111222 234445567888999999999995
Q ss_pred CcceEeccchHHHHHHHHHHhhh-ccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCcc--------hhhc-cCCC
Q 001586 228 MSNASLLDEGTAAAEAMAMCNNI-QKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK--------DIDY-KSGD 297 (1049)
Q Consensus 228 ~~n~sl~~~~Ta~~eA~~~a~~~-~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~~~--------~l~~-l~~~ 297 (1049)
+.++.++.|+|.++..++.++.. ..++||+||+++.+|+++...+...++..|++++.++.+ ++++ ++++
T Consensus 78 ~~~i~~t~g~t~~l~~~~~~~~~~~~~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~l~~~i~~~ 157 (398)
T TIGR03392 78 AENIVWTRGTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLIPWLMVAQQTGAKVVKLPIGADLLPDIRQLPELLTPR 157 (398)
T ss_pred CCeEEEeCChHHHHHHHHHHhhhccCCCCCEEEECCcchhHHHHHHHHHHHHcCcEEEEEecCCCCCcCHHHHHHHhccC
Confidence 67899999999877776655421 123789999999999998888877777889999987652 3444 6788
Q ss_pred EeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCC-CCCCcccceEEEecCccccccCCCCCCceEEEEE
Q 001586 298 VCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTIL-KPPGELGADIVVGSAQRFGVPMGYGGPHAAFLAT 375 (1049)
Q Consensus 298 t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l-~~p~~~GaDivvgs~k~lg~P~~~GGP~~G~l~~ 375 (1049)
|++|++.+| |.+|.+.|+++|+++||++|++++|+. ..+++.. .+..++++|++++|++|+.+| +|.|++++
T Consensus 158 t~lv~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~-a~~~~~~~~~~~~~~~d~~~~s~~K~~gp-----~G~G~l~~ 231 (398)
T TIGR03392 158 TRILALGQMSNVTGGCPDLARAITLAHQYGAVVVVDG-AQGVVHGPPDVQALDIDFYAFSGHKLYGP-----TGIGVLYG 231 (398)
T ss_pred ceEEEEECccccccccCCHHHHHHHHHHcCCEEEEEh-hhhcCCCCCChhhcCCCEEEEecccccCC-----CceEEEEE
Confidence 999999987 789999999999999999999999943 3344433 233568999999999545434 35899999
Q ss_pred chhHHhcCCCceeeeee-cCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcchHHHHHHHHHHHH
Q 001586 376 SQEYKRMMPGRIVGVSI-DSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLA 454 (1049)
Q Consensus 376 ~~~l~~~lpgrivG~s~-d~~g~~~~~l~lqtreq~irrekaTsni~t~~~l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a 454 (1049)
++++.+++++...|... +... + .....++.+.|+|.||.|+ .+..++.+++ .++...|++++.+++.+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~e~GT~~~---~~~~a~~~al--~~l~~~g~~~i~~~~~~l~ 302 (398)
T TIGR03392 232 KTELLEAMPPWQGGGKMLSHVS---F-DGFIPQAVPHRFEAGTPNI---AGVIGLSAAL--EWLTDIDIAAAEAWSVSLA 302 (398)
T ss_pred cHHHHhhCCCeecCCceEeecc---c-cccccCCChhhccCCCCCH---HHHHHHHHHH--HHHHHhCHHHHHHHHHHHH
Confidence 99998888765433211 1000 0 0112234456778899998 5666777776 5555668889999999999
Q ss_pred HHHHHHhhcCCCeEEcCCCCcceEEEecCC--HHHHHHHHHHcCCeeeeec------------CCeEEEEeccCCCHHHH
Q 001586 455 GTFALGLKKLGTVEVQGLPFFDTVKVKCAD--AHAIASAAYKIEMNLRVVD------------SNTVTASFDETTTLEDV 520 (1049)
Q Consensus 455 ~~l~~~L~~~g~~~v~~~~~~~~v~i~~~~--~~~v~~~L~~~gI~~~~~~------------~~~vris~~~~~t~edi 520 (1049)
+++++.|+++.|++++..+....++|.+++ +.++.+.|.++||.++... ++.||+|++.+||++||
T Consensus 303 ~~l~~~l~~l~g~~~~~~~~~~i~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~g~~~~iRvS~~~~~t~~ei 382 (398)
T TIGR03392 303 DLAEERLAQLPGFRSFRCPGSSLLAFDFAGVHHSDLAALLAESGIALRAGQHCAQPLMAALGVSGTLRASFAPYNTQQDV 382 (398)
T ss_pred HHHHHHHhcCCCeEEeCCCCCcEEEEEeCCcCHHHHHHHHHhCCEEEecCccchHHHHHHhCCCCEEEEEeeccCCHHHH
Confidence 999999998844887744333356666655 6789999999999885321 46899999999999999
Q ss_pred HHHHHHHhC
Q 001586 521 DKLFIVFAG 529 (1049)
Q Consensus 521 d~lv~aL~~ 529 (1049)
|+|+++|+.
T Consensus 383 ~~l~~~l~~ 391 (398)
T TIGR03392 383 DALVDAVGA 391 (398)
T ss_pred HHHHHHHHH
Confidence 999999963
No 31
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.95 E-value=3.4e-25 Score=259.49 Aligned_cols=360 Identities=16% Similarity=0.089 Sum_probs=255.0
Q ss_pred HHHHHHHHHHHhcCCCccccccCCCCCCCCCcHHHHHHHHhCC-ccccccCCChhhHhhhHHHHHHHHHHHHHHHhCC-C
Q 001586 150 ESQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENP-AWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGL-P 227 (1049)
Q Consensus 150 E~e~~~~~~~la~~n~~~~~~lG~g~y~~~~p~~i~~~~~~~~-~~~t~ytpyq~e~sqg~le~l~e~q~~ia~L~G~-~ 227 (1049)
-.++++++..+. .+..|.+.-+.|. .|..+.+.+.+-- +|+...+......++...+.+.++++.+++++|. +
T Consensus 6 ~~~~r~~fp~l~-~~~~yld~a~~~~----~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~ 80 (401)
T PRK10874 6 PAQFRAQFPALQ-DAGVYLDSAATAL----KPQAVIEATQQFYSLSAGNVHRSQFAAAQRLTARYEAAREQVAQLLNAPD 80 (401)
T ss_pred HHHHHHhCCCcC-CceEEEeCCcccC----CCHHHHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 344555555442 3456766666665 4444443332200 1111111122234566677888999999999999 6
Q ss_pred CcceEeccchHHHHHHHHHHhhh-ccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc--------chhhc-cCCC
Q 001586 228 MSNASLLDEGTAAAEAMAMCNNI-QKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--------KDIDY-KSGD 297 (1049)
Q Consensus 228 ~~n~sl~~~~Ta~~eA~~~a~~~-~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~~--------~~l~~-l~~~ 297 (1049)
+.++.+++|+|.++..+..++.. ..++|++||+++.+||+++..|+.+++..|++++.++. +++++ ++++
T Consensus 81 ~~~i~~~~~~t~~i~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~ 160 (401)
T PRK10874 81 AKNIVWTRGTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLVPWLMVAQQTGAKVVKLPLGADRLPDVDLLPELITPR 160 (401)
T ss_pred CCEEEEECCHHHHHHHHHHHhhhccCCCcCEEEECCcchHHHHHHHHHHHHHhCCEEEEEecCCCCcCCHHHHHHhcCcC
Confidence 78899999999887776665421 12378999999999999988888777888999988765 23445 7889
Q ss_pred EeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCC-CCCCcccceEEEecCccccccCCCCCCceEEEEE
Q 001586 298 VCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTIL-KPPGELGADIVVGSAQRFGVPMGYGGPHAAFLAT 375 (1049)
Q Consensus 298 t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l-~~p~~~GaDivvgs~k~lg~P~~~GGP~~G~l~~ 375 (1049)
|++|++.+| |.+|.+.|+++|+++||++|++++|+. ..+++.. .+..++|+|++++|++|+.+| ||+|++++
T Consensus 161 t~lv~i~~~~n~tG~~~~~~~i~~l~~~~g~~~ivD~-a~~~g~~~~~~~~~~~d~~~~s~~K~~gp-----~G~G~l~~ 234 (401)
T PRK10874 161 TRILALGQMSNVTGGCPDLARAITLAHQAGMVVMVDG-AQGAVHFPADVQALDIDFYAFSGHKLYGP-----TGIGVLYG 234 (401)
T ss_pred cEEEEEeCCcccccCcCCHHHHHHHHHHcCCEEEEEC-CcccccccCCchhcCCCEEEEecccccCC-----CccEEEEE
Confidence 999999987 789999999999999999999999943 3344433 234678999999998445334 45799999
Q ss_pred chhHHhcCCCceeeeee-cCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcchHHHHHHHHHHHH
Q 001586 376 SQEYKRMMPGRIVGVSI-DSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLA 454 (1049)
Q Consensus 376 ~~~l~~~lpgrivG~s~-d~~g~~~~~l~lqtreq~irrekaTsni~t~~~l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a 454 (1049)
++++.+.+++...|... +. . .|. .+..++.+.|+|.||.|+ ....++.+|+ .++...|+.++.+++.+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~--~-~~~-~~~~~~~~~~~e~Gt~~~---~~~~al~~al--~~l~~~g~~~~~~~~~~l~ 305 (401)
T PRK10874 235 KSELLEAMSPWQGGGKMLTE--V-SFD-GFTPQSAPWRFEAGTPNV---AGVIGLSAAL--EWLADIDINQAESWSRSLA 305 (401)
T ss_pred chHHHhcCCCeecCCcceEe--e-ccC-ccCCCCChhhccCCCcCH---HHHHHHHHHH--HHHHHhCHHHHHHHHHHHH
Confidence 99999888765433210 00 0 010 111233445778899998 5666777776 5566678888999999999
Q ss_pred HHHHHHhhcCCCeEEcCCCCcceEEEecCC--HHHHHHHHHHcCCeeeeec------------CCeEEEEeccCCCHHHH
Q 001586 455 GTFALGLKKLGTVEVQGLPFFDTVKVKCAD--AHAIASAAYKIEMNLRVVD------------SNTVTASFDETTTLEDV 520 (1049)
Q Consensus 455 ~~l~~~L~~~g~~~v~~~~~~~~v~i~~~~--~~~v~~~L~~~gI~~~~~~------------~~~vris~~~~~t~edi 520 (1049)
++++++|+++.|++++..+....+.|.+++ ..++.+.|.++||.++... .+.+|+|++.+||++||
T Consensus 306 ~~l~~~l~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~L~~~gI~v~~g~~~~~~~~~~~g~~~~iRiS~~~~nt~edi 385 (401)
T PRK10874 306 TLAEDALAKLPGFRSFRCQDSSLLAFDFAGVHHSDLVTLLAEYGIALRAGQHCAQPLLAALGVTGTLRASFAPYNTQSDV 385 (401)
T ss_pred HHHHHHHhcCCCEEEeCCCCCcEEEEEECCcCHHHHHHHHHHCCcEEeccccchHHHHHHhCCCCEEEEEecccCCHHHH
Confidence 999999998833887743333345666655 6789999999999875421 47899999999999999
Q ss_pred HHHHHHHhC
Q 001586 521 DKLFIVFAG 529 (1049)
Q Consensus 521 d~lv~aL~~ 529 (1049)
|+|+++|..
T Consensus 386 d~ll~al~~ 394 (401)
T PRK10874 386 DALVNAVDR 394 (401)
T ss_pred HHHHHHHHH
Confidence 999999963
No 32
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.95 E-value=2.2e-25 Score=263.04 Aligned_cols=310 Identities=17% Similarity=0.125 Sum_probs=234.6
Q ss_pred hhhHHHHHHHHHHHHHHHhCCC-CcceEeccchHHHHHHHHHHhhh-ccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEE
Q 001586 206 AQGRLESLLNFQTMIADLTGLP-MSNASLLDEGTAAAEAMAMCNNI-QKGKKKTFIIASNCHPQTIDICITRADGFDIKV 283 (1049)
Q Consensus 206 sqg~le~l~e~q~~ia~L~G~~-~~n~sl~~~~Ta~~eA~~~a~~~-~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v 283 (1049)
+.-..+.+.++++.+++++|++ +.++.++.|+|.++..++.++.. ..++|++||++..+||++...|+.+++..|+++
T Consensus 71 ~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~al~~i~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~a~~~g~~v 150 (424)
T PLN02855 71 SAKATDAYELARKKVAAFINASTSREIVFTRNATEAINLVAYTWGLANLKPGDEVILSVAEHHSNIVPWQLVAQKTGAVL 150 (424)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCHHHHHHHHHHHhhhhcCCCcCEEEECCCccHHHHHHHHHHHHHcCCEE
Confidence 3444567788999999999996 46899999999777765544321 123789999999999999999988888889999
Q ss_pred EEeCc--------chhhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCC-CCCCcccceEE
Q 001586 284 VVSDL--------KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTIL-KPPGELGADIV 352 (1049)
Q Consensus 284 ~~v~~--------~~l~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l-~~p~~~GaDiv 352 (1049)
+.+++ +++++ ++++|++|++++| |.+|.+.|+++|+++||++|++++|++ ..+.+.. .+..++|+|++
T Consensus 151 ~~v~~~~~~~~~~~~l~~~i~~~t~lv~i~~~~n~tG~~~~~~~I~~l~~~~g~~vivD~-a~~~g~~~~~~~~~~~d~~ 229 (424)
T PLN02855 151 KFVGLTPDEVLDVEQLKELLSEKTKLVATHHVSNVLGSILPVEDIVHWAHAVGAKVLVDA-CQSVPHMPVDVQTLGADFL 229 (424)
T ss_pred EEEecCCCCCcCHHHHHHHhccCceEEEEeCccccccccCCHHHHHHHHHHcCCEEEEEh-hhhcCCcCCCchhcCCCEE
Confidence 88765 23455 7789999999987 789999999999999999999999942 2344433 23467899999
Q ss_pred EecCccccccCCCCCCceEEEEEchhHHhcCCCceeeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHH
Q 001586 353 VGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAA 432 (1049)
Q Consensus 353 vgs~k~lg~P~~~GGP~~G~l~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irrekaTsni~t~~~l~a~~aa 432 (1049)
++|++|+.+| +|.|++++++++.+++++.+.|++.... . |......++.+.|+|.||.|+ .+++++.++
T Consensus 230 ~~s~~K~~gp-----~G~G~l~~~~~~~~~~~p~~~g~~~~~~--~-~~~~~~~~~~~~r~e~GT~~~---~~~~~l~~a 298 (424)
T PLN02855 230 VASSHKMCGP-----TGIGFLWGKSDLLESMPPFLGGGEMISD--V-FLDHSTYAPPPSRFEAGTPAI---GEAIGLGAA 298 (424)
T ss_pred EeecccccCC-----CccEEEEEchhhhhcCCCEecCCCceee--e-ecCccccCCChhhccCCChHH---HHHHHHHHH
Confidence 9999656433 4589999999999999887766431100 0 100000123455788999998 466666666
Q ss_pred HHHHHhCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEcCCC------CcceEEEecCC--HHHHHHHHHHc-CCeeeee-
Q 001586 433 MYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLP------FFDTVKVKCAD--AHAIASAAYKI-EMNLRVV- 502 (1049)
Q Consensus 433 ~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~g~~~v~~~~------~~~~v~i~~~~--~~~v~~~L~~~-gI~~~~~- 502 (1049)
+ .++...|++++.+++.+++++++++|+++.+++++.+. ....++|.+++ +.++.+.|.++ ||.++.-
T Consensus 299 l--~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~~r~~~v~~~~~~~~~~~v~~~L~~~~gI~v~~g~ 376 (424)
T PLN02855 299 I--DYLSEIGMDRIHEYEVELGTYLYEKLSSVPGVRIYGPKPSEGVGRAALCAFNVEGIHPTDLSTFLDQQHGVAIRSGH 376 (424)
T ss_pred H--HHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCcccccCcccEEEEEECCcCHHHHHHHhcccCCEEEechh
Confidence 6 56666799999999999999999999988449988431 22467777765 67899999887 9987631
Q ss_pred -----------cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001586 503 -----------DSNTVTASFDETTTLEDVDKLFIVFAG 529 (1049)
Q Consensus 503 -----------~~~~vris~~~~~t~edid~lv~aL~~ 529 (1049)
.++.+|+|++.+||.+|||+|+++|+.
T Consensus 377 ~c~~~~~~~~g~~~~iRiS~~~ynt~~di~~l~~~l~~ 414 (424)
T PLN02855 377 HCAQPLHRYLGVNASARASLYFYNTKEEVDAFIHALKD 414 (424)
T ss_pred hhhHHHHHHhCCCCeEEEEeccCCCHHHHHHHHHHHHH
Confidence 136799999999999999999999963
No 33
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.94 E-value=1.4e-24 Score=253.98 Aligned_cols=380 Identities=15% Similarity=0.113 Sum_probs=253.1
Q ss_pred CCcccCCCCCHHHHHHHHHHHhccccCcCccccccccccccCcc-ccccccccCcccccCCCCCchhhhhcHHHHHHHHH
Q 001586 560 THPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNA-TTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLG 638 (1049)
Q Consensus 560 ~~p~~~~~~se~e~~~~l~~l~~~d~~~~~~~i~lGs~t~~~~~-~~~~~~~~~~~f~~~~P~~p~e~~~G~~~~i~el~ 638 (1049)
++| +++++.+|+++.+...--.|... ....+|.||....+ ..+.+.. +.+-++..| ..++...+++.++.
T Consensus 16 ~~p--~~~~~~~~~~~~~~~~iyld~~a--~~~~~~~~tt~~~p~~~~~~~~----~l~~~~~np-~s~~~~~~le~~~~ 86 (431)
T TIGR01788 16 RMP--EEEMPPDAAYQLIHDELSLDGNP--RLNLATFVTTWMEPEARKLMDE----TINKNMIDK-DEYPQTAEIENRCV 86 (431)
T ss_pred cCC--CCCCCHHHHHHHHHHHhhhcCCc--ceeeeeeeCCCCCHHHHHHHHH----HHhcCCCCc-ccCccHHHHHHHHH
Confidence 466 68899999999998765444332 23456777665433 2233211 111112222 22344558999999
Q ss_pred HHHHHhhCCC-c--c-ccc-cCchHHHHHHHHHHHHHHH-H---hcCCC-CCCEEEEcCCCCCccHHHHHhcCCEEEEEc
Q 001586 639 EWLCTITGFD-S--F-SLQ-PNAGAAGEYAGLMVIRAYH-K---ARGDH-HRNVCIIPVSAHGTNPATAAMCGMKIVSVG 708 (1049)
Q Consensus 639 ~~la~l~G~~-~--~-~l~-~~sGa~ge~a~l~air~y~-~---~~G~~-~r~~VLip~saHg~~pa~a~~~G~~Vv~V~ 708 (1049)
+|+++++|++ . . .+. .++|++++..++.++|... . ..|.. .+.+|+++..+|.+..+.+...|++++.||
T Consensus 87 ~~la~llg~~~~~~~~~g~~TsGgTEAn~~al~~ar~~~~~~~~~~g~~~~~~~ii~s~~~H~sv~ka~~~lg~~v~~i~ 166 (431)
T TIGR01788 87 NMLADLWHAPAKDAEAVGTSTIGSSEAIMLGGLAMKWRWRKRMEAAGKPTDKPNLVMGSNVQVCWEKFARYFDVELREVP 166 (431)
T ss_pred HHHHHHhCCCCCCCCCeEEEechHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCcchHHHHHHHHHcCceeEEEe
Confidence 9999999998 2 2 222 3445555544444443211 1 11210 134789999999888888889999999999
Q ss_pred CCCC-CCCCHHHHHHHHHhcCCCeEEEEEEcCCc-cccccccHHHHHHHHHHc------CCEEEEeccccccccCcCC--
Q 001586 709 TDAK-GNINIEELRKAAEANRDNLSTLMVTYPST-HGVYEEGIDEICKIIHDN------GGQVYMDGANMNAQVGLTS-- 778 (1049)
Q Consensus 709 ~d~~-g~iD~~~L~~~i~~~~~~taaV~it~Pn~-~G~i~~di~eI~~lah~~------G~ll~vD~A~~~a~~gl~~-- 778 (1049)
+|++ +.+|+++|+++|+ ++|.+|+++..|+ +|.++ ||++|+++|+++ |+++|||+|+......+..
T Consensus 167 ~d~~~~~vd~~~L~~~i~---~~t~lV~~t~g~t~tG~id-pi~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~ 242 (431)
T TIGR01788 167 MDPGRYVIDPEQVVEAVD---ENTIGVVCILGTTYTGEYE-DVKALNDALDEYNAKTGWDIPIHVDAASGGFIAPFVYPD 242 (431)
T ss_pred cCCCceeeCHHHHHHHHh---hCCeEEEEEeCCCCCcccC-CHHHHHHHHHHHHhhhCCCceEEEecccHHHHHHHhCCC
Confidence 9876 5999999999998 7899999999975 99999 799999999999 9999999986522211111
Q ss_pred -C---CccCCcEEEeCCCcccccCCCCCCCceeEEEEccc--ccccCCCC--ccccCCCCCCCCCCCCCCCCCccchhhH
Q 001586 779 -P---GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH--LAPFLPSH--PVVSTGGIPAPEKSQPLGTIAAAPWGSA 850 (1049)
Q Consensus 779 -P---g~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~--l~~~lpg~--~vg~t~~~~~~~~~~~t~~i~sa~~g~~ 850 (1049)
+ ...++|.+++|+||++. |.+|+|+++++++ +.+.+... ..+... ... .+..+..|
T Consensus 243 ~~~~~~~~~~DSis~s~HK~~~-----~P~g~G~l~~r~~~~l~~~~~~~~~yl~~~~------~~~---t~~~sR~g-- 306 (431)
T TIGR01788 243 LEWDFRLPRVKSINVSGHKYGL-----VYPGVGWVIWRDEEALPEELIFHVNYLGGDE------PTF---TLNFSRPA-- 306 (431)
T ss_pred chhhcCCCCceEEEECchhccC-----CCCCcEEEEEeChHHcchhheecccccCCCC------CCc---ceecCchH--
Confidence 1 23588999999999863 3347889999864 32322100 111100 000 11111111
Q ss_pred HHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc--CCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHH
Q 001586 851 LILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM 928 (1049)
Q Consensus 851 ~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~--~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~ 928 (1049)
..++..|..|..+|.+|+.++.++++++++|+.++|++. ++++.++ +..+.+.|+..... ..+.+..++.++|.
T Consensus 307 ~~al~~w~~l~~lG~~G~~~i~~~~~~la~~l~~~L~~~~~~el~~~~---~~~~iV~Fr~~~~~-~~~~~~~~l~~~L~ 382 (431)
T TIGR01788 307 NQVIAQYYNFLRLGREGYRKIMQNSLDVARYLAEEIAKLGPFEIISDG---SGIPLVAFKLKDDA-DPGYTLYDLSHRLR 382 (431)
T ss_pred HHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeCC---CCceEEEEEeCCCC-CCCcCHHHHHHHHH
Confidence 123458999999999999999999999999999999876 5554221 23444556553210 11356789999999
Q ss_pred HCCcccCCCCCC--CC--CEEEEEccCCCCHHHHHHHHHHHHHHHHHH
Q 001586 929 DYGFHGPTMSWP--VP--GTLMIEPTESESKEELDRYCDALISIREEI 972 (1049)
Q Consensus 929 ~~Gi~~~~~~~p--~~--~~lri~~t~~~t~eeid~fv~aL~~i~~~i 972 (1049)
++||.+.....| +. -.+|+++....+++.+|+|+++|++++.++
T Consensus 383 ~~G~~~~~~~~p~~~~~~~~lR~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (431)
T TIGR01788 383 ERGWIVPAYTLPKNAEDIVVMRIVVREGFSRDLAELLIEDIEAALAYL 430 (431)
T ss_pred HCCCcccCCCCCCccCCeEEEEEEecCCCCHHHHHHHHHHHHHHHHhh
Confidence 999986543333 21 357999998999999999999999987653
No 34
>PRK02769 histidine decarboxylase; Provisional
Probab=99.94 E-value=5e-25 Score=254.48 Aligned_cols=300 Identities=17% Similarity=0.186 Sum_probs=217.1
Q ss_pred cHHHHHHHHHHHHHHhhCCCccc---cccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCEEE
Q 001586 629 GYQEMFNNLGEWLCTITGFDSFS---LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIV 705 (1049)
Q Consensus 629 G~~~~i~el~~~la~l~G~~~~~---l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~Vv 705 (1049)
...+++.++.+++++++|.+... +..++|++++ ++++..+++. .++++|+++..+|.++.+.+...|++++
T Consensus 62 ~~~~~e~~~~~~~a~l~g~~~~~~~G~~TsGgTean---~~a~~~ar~~---~~~~~ii~s~~~H~Sv~ka~~~lg~~~~ 135 (380)
T PRK02769 62 NSFDFERDVMNFFAELFKIPFNESWGYITNGGTEGN---LYGCYLAREL---FPDGTLYYSKDTHYSVSKIARLLRIKSR 135 (380)
T ss_pred ChHHHHHHHHHHHHHHhCCCCCCCCEEEecChHHHH---HHHHHHHHHh---CCCcEEEeCCCceehHHHHHHHcCCCCc
Confidence 46788999999999999997532 3344555554 4554443321 1356899999999999999999999999
Q ss_pred EEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCCc-cccccccHHHHHHHHHHcC---CEEEEeccccccccCcCC---
Q 001586 706 SVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPST-HGVYEEGIDEICKIIHDNG---GQVYMDGANMNAQVGLTS--- 778 (1049)
Q Consensus 706 ~V~~d~~g~iD~~~L~~~i~~~~~~taaV~it~Pn~-~G~i~~di~eI~~lah~~G---~ll~vD~A~~~a~~gl~~--- 778 (1049)
.|+++++|++|+++|+++|++.+.+|.+|+++++++ +|.++ |+++|+++|+++| +++|||+|+......+..
T Consensus 136 ~V~~~~~g~id~~~L~~~i~~~~~~t~lvv~t~gtt~tG~id-pi~~I~~i~~~~g~~~~~lHVDaA~gg~~~p~~~~~~ 214 (380)
T PRK02769 136 VITSLPNGEIDYDDLISKIKENKNQPPIIFANIGTTMTGAID-NIKEIQEILKKIGIDDYYIHADAALSGMILPFVNNPP 214 (380)
T ss_pred eeccCCCCcCcHHHHHHHHHhCCCCcEEEEEEeCCCCCcccC-CHHHHHHHHHHhCCCceEEEEEecccceeecccCccc
Confidence 999988999999999999985444599999999975 99999 7999999999998 699999986533332211
Q ss_pred C--CccCCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHH
Q 001586 779 P--GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPIS 856 (1049)
Q Consensus 779 P--g~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a 856 (1049)
+ +..|+|.+++|+||+++.|+ |+|+++++++....+....-... ..+. .+..+. ++..++..
T Consensus 215 ~~d~~~~vDsis~s~HK~~~~P~-----g~G~l~~r~~~~~~~~~~~~yl~------~~d~---t~~GSR--~g~~~l~l 278 (380)
T PRK02769 215 PFSFADGIDSIAISGHKFIGSPM-----PCGIVLAKKKYVERISVDVDYIG------SRDQ---TISGSR--NGHTALLL 278 (380)
T ss_pred cCCccCCCCEEEECCcccCCCCC-----CcEEEEEehhhhhhcccCccccC------CCCC---CccCCC--CcHHHHHH
Confidence 1 22389999999999985443 56789999865554421100000 0111 111111 12335668
Q ss_pred HHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHHHCCcccC
Q 001586 857 YTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGP 935 (1049)
Q Consensus 857 ~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~-~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~ 935 (1049)
|+.|+.+|.+|+++..++++++++|+.++|++. ++++. . |..+.++|..+ + +++. +||++.
T Consensus 279 w~aL~~lg~~G~~~~~~~~~~la~~l~~~L~~~g~~~~~-~---p~~~~v~f~~~--------~-~~~~-----~~w~l~ 340 (380)
T PRK02769 279 WAAIRSLGSKGLRQRVQHCLDMAQYAVDRLQANGIPAWR-N---PNSITVVFPCP--------S-ERIW-----KKWHLA 340 (380)
T ss_pred HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEc-C---CCceEEEEcCC--------C-HHHH-----hCeeEc
Confidence 999999999999999999999999999999875 55432 1 34444555432 1 2332 689987
Q ss_pred CCCCCCCCEEEEEccCCCCHHHHHHHHHHHHHHHHHHH
Q 001586 936 TMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIA 973 (1049)
Q Consensus 936 ~~~~p~~~~lri~~t~~~t~eeid~fv~aL~~i~~~i~ 973 (1049)
+.. +.++++++..++++.||+|+++|.+......
T Consensus 341 ~~~----~~~hi~~~~~~~~~~~~~f~~dl~~~~~~~~ 374 (380)
T PRK02769 341 TSG----NQAHIITMPHHNKQQIDSLIDELIFDLKNPN 374 (380)
T ss_pred ccC----CEEEEEECCCCCHHHHHHHHHHHHHHHhccc
Confidence 553 6899999999999999999999998876433
No 35
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.94 E-value=3.7e-25 Score=247.80 Aligned_cols=287 Identities=17% Similarity=0.188 Sum_probs=225.0
Q ss_pred hHHHHHHHHHHHHHHHhCCCCcceEeccchHHHHHHHHHHhhh-----c-cCCCCEEEEcCCCCHHHHHHHHHhhcCCCe
Q 001586 208 GRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNI-----Q-KGKKKTFIIASNCHPQTIDICITRADGFDI 281 (1049)
Q Consensus 208 g~le~l~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a~~~-----~-~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi 281 (1049)
-..+.+.++++.||+++|+++.++.+++||| |+.++++.. . ++++++||++..+||+++..++.+ +..|+
T Consensus 41 ~A~~~ve~AR~~iA~llga~~~eIiFTSG~T---EsnNlaI~g~~~a~~~~~~~~HIIts~iEH~aVl~~~~~L-e~~g~ 116 (386)
T COG1104 41 EARKAVEEAREQIAKLLGADPEEIIFTSGAT---ESNNLAIKGAALAYRNAQKGKHIITSAIEHPAVLNTCRYL-ERQGF 116 (386)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCeEEEecCCc---HHHHHHHHhhHHhhhcccCCCeEEEcccccHHHHHHHHHH-HhcCC
Confidence 4568899999999999999999999999999 555554331 1 236889999999999999999987 77899
Q ss_pred EEEEeCc--------chhhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCC-CCCCcccce
Q 001586 282 KVVVSDL--------KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTIL-KPPGELGAD 350 (1049)
Q Consensus 282 ~v~~v~~--------~~l~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l-~~p~~~GaD 350 (1049)
+|.++++ ++|++ |++||.+|.|++. |.+|+|+||++|+++|+++|++++|++ ..++|.+ .++.++|+|
T Consensus 117 ~Vtyl~V~~~G~v~~e~L~~al~~~T~LVSim~aNnE~G~IQpI~ei~~i~k~~~i~fHvDA-vQa~Gkipi~~~~~~vD 195 (386)
T COG1104 117 EVTYLPVDSNGLVDLEQLEEALRPDTILVSIMHANNETGTIQPIAEIGEICKERGILFHVDA-VQAVGKIPIDLEELGVD 195 (386)
T ss_pred eEEEeCCCCCCeEcHHHHHHhcCCCceEEEEEecccCeeecccHHHHHHHHHHcCCeEEEeh-hhhcCceeccccccCcc
Confidence 9999876 35666 8999999999986 689999999999999999999999953 3477755 356788999
Q ss_pred EEEecCccccccCCCCCCceEEEEEchhHHhcCCCceeeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHH
Q 001586 351 IVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANM 430 (1049)
Q Consensus 351 ivvgs~k~lg~P~~~GGP~~G~l~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irrekaTsni~t~~~l~a~~ 430 (1049)
++..|+++|++|. |.|++|+++.. ++.+.+.| |.+ |+. +-.||.|+ .++.|+.
T Consensus 196 ~ls~SaHK~~Gpk-----GiGaLyv~~~~--~~~p~i~G------GgQ---------E~g--~RsGTenv---~~Ivg~~ 248 (386)
T COG1104 196 LLSFSAHKFGGPK-----GIGALYVRPGV--RLEPLIHG------GGQ---------ERG--LRSGTENV---PGIVGFG 248 (386)
T ss_pred eEEeehhhccCCC-----ceEEEEECCCC--ccCceecc------CcC---------CCC--CCCCCccH---HHHHHHH
Confidence 9999999998775 47889997654 35566666 222 111 22699998 5666666
Q ss_pred HHHHHHHhCcchHHHHHHHHHHHHHHHHHHhhcC-CCeEEcCC--CC-cceEEEecCC--HHHHHHHHHHcCCeeee---
Q 001586 431 AAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKL-GTVEVQGL--PF-FDTVKVKCAD--AHAIASAAYKIEMNLRV--- 501 (1049)
Q Consensus 431 aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~-g~~~v~~~--~~-~~~v~i~~~~--~~~v~~~L~~~gI~~~~--- 501 (1049)
.|+. +..+.++....++..+-++|.+.|.+. +++.+.+. ++ .+.+.|.+++ ++.+.-.|..+||.++.
T Consensus 249 ~A~~---~a~~~~~~~~~~~~~lr~~l~~~l~~~~p~~~~~g~~~~rlP~~~~~~f~gv~gE~ll~~L~~~gI~vStGSA 325 (386)
T COG1104 249 KAAE---IAVEELEEENARLRKLRDRLEDGLLEIIPDVYLNGDDEPRLPNILNFSFPGVEGESLLLALDLAGIAVSTGSA 325 (386)
T ss_pred HHHH---HHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEcCCcccCCCCeEEEEeCCCcHHHHHHhccccCeEEecccc
Confidence 6653 334567778888889999999999975 54666543 22 3577888887 77888888888998731
Q ss_pred ----------------e----cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001586 502 ----------------V----DSNTVTASFDETTTLEDVDKLFIVFAG 529 (1049)
Q Consensus 502 ----------------~----~~~~vris~~~~~t~edid~lv~aL~~ 529 (1049)
. -.+.||+|++.+||++|||+++++|..
T Consensus 326 CsS~~~~pShVL~AmG~~~e~a~~siR~S~g~~tt~eei~~~~~~l~~ 373 (386)
T COG1104 326 CSSGSLEPSHVLRAMGISEELAHGSIRFSLGRFTTEEEIDAAAEALKE 373 (386)
T ss_pred ccCCCCCccHHHHHcCCChHHhCccEEEEcCCCCCHHHHHHHHHHHHH
Confidence 0 137899999999999999999999974
No 36
>PLN02263 serine decarboxylase
Probab=99.94 E-value=5.9e-25 Score=255.41 Aligned_cols=300 Identities=17% Similarity=0.211 Sum_probs=216.7
Q ss_pred cHHHHHHHHHHHHHHhhCCCcc---ccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCEEE
Q 001586 629 GYQEMFNNLGEWLCTITGFDSF---SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIV 705 (1049)
Q Consensus 629 G~~~~i~el~~~la~l~G~~~~---~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~Vv 705 (1049)
+..+++.++.+|+++++|++.. -...++|++|++.++++.|.+. ++..+++|..+|.+..+++.++|++++
T Consensus 130 ~s~~~E~~Vi~wla~L~g~p~~~~~G~vtsGGTEaNL~Al~aARe~~------~~~vvy~S~~aH~Sv~KAa~llgi~~~ 203 (470)
T PLN02263 130 HSRQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVGREVF------PDGILYASRESHYSVFKAARMYRMECV 203 (470)
T ss_pred hHHHHHHHHHHHHHHHhCCCCCCCeEEEeCcHHHHHHHHHHHHHhhc------CCcEEEEcCCccHHHHHHHHhcCCcce
Confidence 5789999999999999999752 2445666666655555555421 234688999999999999999999999
Q ss_pred EEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCCc-cccccccHHHHHHHHHHcCC-----EEEEeccccccccCcC--
Q 001586 706 SVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPST-HGVYEEGIDEICKIIHDNGG-----QVYMDGANMNAQVGLT-- 777 (1049)
Q Consensus 706 ~V~~d~~g~iD~~~L~~~i~~~~~~taaV~it~Pn~-~G~i~~di~eI~~lah~~G~-----ll~vD~A~~~a~~gl~-- 777 (1049)
.||++++|++|+++|+++|++...++..|+.+.++| +|.+| ||++|+++|+++|+ |+|||||.......+.
T Consensus 204 ~Vp~d~~g~mD~~aL~~aI~~d~~~P~iVvataGTT~~GAiD-pi~eIa~i~~~~g~~~~~iwlHVDAA~GG~~lPf~~~ 282 (470)
T PLN02263 204 KVDTLVSGEIDCADFKAKLLANKDKPAIINVNIGTTVKGAVD-DLDLVIKTLEECGFSQDRFYIHCDGALFGLMMPFVKR 282 (470)
T ss_pred EeccCCCCcCcHHHHHHHHHhCCCCcEEEEEEecCCCCcCCC-CHHHHHHHHHHcCCccCCeeEEEeccchhhHhhhccc
Confidence 999999999999999999986444577888888876 99999 89999999999997 9999997421111111
Q ss_pred CC---CccCCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHH
Q 001586 778 SP---GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILP 854 (1049)
Q Consensus 778 ~P---g~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~ 854 (1049)
.| +..++|.++.|+|||+..|+++ |++.++++....+....-... ..+. .+..+.- +..++
T Consensus 283 ~~~~df~~~vDSIsvD~HK~l~~P~~c-----gvll~R~~~~~~~~~~~~Yl~------~~d~---ti~gSR~--g~~al 346 (470)
T PLN02263 283 APKVTFKKPIGSVSVSGHKFVGCPMPC-----GVQITRMEHINVLSSNVEYLA------SRDA---TIMGSRN--GHAPI 346 (470)
T ss_pred ccccCCCcCccEEEECCccccCCCcCE-----EEEEEehhhHhhhccChHhhC------CCCC---CcCCCCC--cHHHH
Confidence 11 2235999999999999888765 578888654433211100000 0111 1111111 12356
Q ss_pred HHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHHHCCcc
Q 001586 855 ISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFH 933 (1049)
Q Consensus 855 ~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~-~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~ 933 (1049)
..|+.|+.+|.+|+++..++++++|+|+.++|++. +.++. . |....++|..+ ..+ +..+||+
T Consensus 347 ~lW~~L~~~G~~G~~~~i~~~~~~A~~l~~~l~~~g~~~~~-~---p~s~~V~f~~p---------~~~----~~~~gW~ 409 (470)
T PLN02263 347 FLWYTLNRKGYRGFQKEVQKCLRNAHYLKDRLREAGISAML-N---ELSSTVVFERP---------KDE----EFVRRWQ 409 (470)
T ss_pred HHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEe-C---CCceEEEEecC---------chH----HhhcceE
Confidence 78999999999999999999999999999999886 44432 2 33334555432 111 2357999
Q ss_pred cCCCCCCCCCEEEEEccCCCCHHHHHHHHHHHHHHHHHH
Q 001586 934 GPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEI 972 (1049)
Q Consensus 934 ~~~~~~p~~~~lri~~t~~~t~eeid~fv~aL~~i~~~i 972 (1049)
+.+. ++.+++++++..+++.+|+|+++|++..+..
T Consensus 410 L~~~----~~~~Hivvmphv~~~~id~fi~DL~~~~~~~ 444 (470)
T PLN02263 410 LACQ----GNIAHVVVMPSVTIEKLDYFLKELVEKRSTW 444 (470)
T ss_pred EccC----CCcEEEEEcCCCCHHHHHHHHHHHHHHHhhh
Confidence 8754 3669999999889999999999999887643
No 37
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.94 E-value=1.1e-24 Score=243.98 Aligned_cols=310 Identities=18% Similarity=0.236 Sum_probs=222.8
Q ss_pred HHHHHHHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHH-HHHhcCCCCCCEEEEcCCCCCccHHHHHh---cCCEEE
Q 001586 630 YQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRA-YHKARGDHHRNVCIIPVSAHGTNPATAAM---CGMKIV 705 (1049)
Q Consensus 630 ~~~~i~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~-y~~~~G~~~r~~VLip~saHg~~pa~a~~---~G~~Vv 705 (1049)
..+++++.++.+++++|.+...+..+||+ +|+..++++. +...+...++++||++...|.+.-..++. .|++|.
T Consensus 42 A~~~ve~AR~~iA~llga~~~eIiFTSG~--TEsnNlaI~g~~~a~~~~~~~~HIIts~iEH~aVl~~~~~Le~~g~~Vt 119 (386)
T COG1104 42 ARKAVEEAREQIAKLLGADPEEIIFTSGA--TESNNLAIKGAALAYRNAQKGKHIITSAIEHPAVLNTCRYLERQGFEVT 119 (386)
T ss_pred HHHHHHHHHHHHHHHhCCCCCeEEEecCC--cHHHHHHHHhhHHhhhcccCCCeEEEcccccHHHHHHHHHHHhcCCeEE
Confidence 45788999999999999998666666654 3355566553 11111123567899998887655444443 599999
Q ss_pred EEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-ccccccccHHHHHHHHHHcCCEEEEeccccccccCcCCCCccCC
Q 001586 706 SVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGA 784 (1049)
Q Consensus 706 ~V~~d~~g~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~Pg~~Ga 784 (1049)
++|++++|.+|+++|+++|+ ++|.+|.|.+.| .+|+++ ||++|+++|+++|+++|+|++|..+...+ .+.++++
T Consensus 120 yl~V~~~G~v~~e~L~~al~---~~T~LVSim~aNnE~G~IQ-pI~ei~~i~k~~~i~fHvDAvQa~Gkipi-~~~~~~v 194 (386)
T COG1104 120 YLPVDSNGLVDLEQLEEALR---PDTILVSIMHANNETGTIQ-PIAEIGEICKERGILFHVDAVQAVGKIPI-DLEELGV 194 (386)
T ss_pred EeCCCCCCeEcHHHHHHhcC---CCceEEEEEecccCeeecc-cHHHHHHHHHHcCCeEEEehhhhcCceec-cccccCc
Confidence 99999999999999999998 899999999996 599999 79999999999999999999986554443 3456789
Q ss_pred cEEEeCCCcccccCCCCCCC-ceeEEEEccc--ccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHH
Q 001586 785 DVCHLNLHKTFCIPHGGGGP-GMGPIGVKKH--LAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIA 861 (1049)
Q Consensus 785 Di~~~s~hK~f~~P~g~GGP-g~G~i~~~~~--l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~ 861 (1049)
|++.+|.||. +|| |+|++++++. +.+.+.|. |+ .+++..+|.|+.+ ..+ .+.| .
T Consensus 195 D~ls~SaHK~-------~GpkGiGaLyv~~~~~~~p~i~GG--gQ-----E~g~RsGTenv~~----Ivg---~~~A--~ 251 (386)
T COG1104 195 DLLSFSAHKF-------GGPKGIGALYVRPGVRLEPLIHGG--GQ-----ERGLRSGTENVPG----IVG---FGKA--A 251 (386)
T ss_pred ceEEeehhhc-------cCCCceEEEEECCCCccCceeccC--cC-----CCCCCCCCccHHH----HHH---HHHH--H
Confidence 9999999994 566 9999999764 33444332 11 1223334455432 111 1111 1
Q ss_pred HHchhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCC-CceeeEEEEeccCccccCCCCHHHHHHHHHHCCcccCCC--
Q 001586 862 MMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVN-GTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTM-- 937 (1049)
Q Consensus 862 ~lG~eGl~~~~~~~~~~a~yL~~~L~~~-~~v~~~g~~-g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~-- 937 (1049)
.+-.+.+.....+...+.++|.++|++. ..+.+.|.. ....|.+.+.++ +++.+.+.-.|..+||.+++-
T Consensus 252 ~~a~~~~~~~~~~~~~lr~~l~~~l~~~~p~~~~~g~~~~rlP~~~~~~f~------gv~gE~ll~~L~~~gI~vStGSA 325 (386)
T COG1104 252 EIAVEELEEENARLRKLRDRLEDGLLEIIPDVYLNGDDEPRLPNILNFSFP------GVEGESLLLALDLAGIAVSTGSA 325 (386)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEcCCcccCCCCeEEEEeC------CCcHHHHHHhccccCeEEecccc
Confidence 2223345555666767788888888875 445444432 234456667775 688899999999999997542
Q ss_pred -CC----C-------------CCCEEEEEccCCCCHHHHHHHHHHHHHHHHHHHHh
Q 001586 938 -SW----P-------------VPGTLMIEPTESESKEELDRYCDALISIREEIAQI 975 (1049)
Q Consensus 938 -~~----p-------------~~~~lri~~t~~~t~eeid~fv~aL~~i~~~i~~i 975 (1049)
+- | ..+.+|++++..+|++|+|+++++|+++++.++.+
T Consensus 326 CsS~~~~pShVL~AmG~~~e~a~~siR~S~g~~tt~eei~~~~~~l~~~i~~lr~~ 381 (386)
T COG1104 326 CSSGSLEPSHVLRAMGISEELAHGSIRFSLGRFTTEEEIDAAAEALKEIIKRLREL 381 (386)
T ss_pred ccCCCCCccHHHHHcCCChHHhCccEEEEcCCCCCHHHHHHHHHHHHHHHHHHhhh
Confidence 11 2 14789999999999999999999999999998764
No 38
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.93 E-value=9.3e-24 Score=247.44 Aligned_cols=306 Identities=18% Similarity=0.138 Sum_probs=228.1
Q ss_pred hHHHHHHHHHHHHHHHhCCC-CcceEeccchHHHHHHHHHHhhhc-cCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEE
Q 001586 208 GRLESLLNFQTMIADLTGLP-MSNASLLDEGTAAAEAMAMCNNIQ-KGKKKTFIIASNCHPQTIDICITRADGFDIKVVV 285 (1049)
Q Consensus 208 g~le~l~e~q~~ia~L~G~~-~~n~sl~~~~Ta~~eA~~~a~~~~-~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~ 285 (1049)
-..+.+.++++.+++++|++ ..++.+++|+|.++..++.++... .++|++||+++.+|+++...++..++..|++++.
T Consensus 59 ~~~~~~~~~r~~ia~~~~~~~~~~v~~~~g~t~~l~~~~~~~~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~~~~ 138 (403)
T TIGR01979 59 RATEAYEAVREKVAKFINAASDEEIVFTRGTTESINLVAYSWGDSNLKAGDEIVISEMEHHANIVPWQLLAERTGATLKF 138 (403)
T ss_pred HHHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHHHHHHhhhhcCCCCCEEEECcchhhHHHHHHHHHHHhcCcEEEE
Confidence 34566888999999999998 578999999997776655554211 2378999999999999998888777778999988
Q ss_pred eCc--------chhhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCC-CCCCcccceEEEe
Q 001586 286 SDL--------KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTIL-KPPGELGADIVVG 354 (1049)
Q Consensus 286 v~~--------~~l~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l-~~p~~~GaDivvg 354 (1049)
++. +++++ +++++++|++++| |++|.+.|+++|+++||++|++++|+. .++.+.+ .+..++|+|++++
T Consensus 139 v~~~~~~~~~~~~l~~~i~~~~~lv~~~~~~~~tG~~~~~~~i~~~~~~~~~~~ivD~-a~~~g~~~~~~~~~~~d~~~~ 217 (403)
T TIGR01979 139 IPLDDDGTLDLDDLEKLLTEKTKLVAITHVSNVLGTVNPVEEIAKLAHQVGAKVLVDG-AQAVPHMPVDVQALDCDFYVF 217 (403)
T ss_pred EecCCCCCCCHHHHHHHhccCCeEEEEEcccccccccCCHHHHHHHHHHcCCEEEEEc-hhhcCccccCccccCCCEEEE
Confidence 865 33444 7788999999987 789999999999999999999999943 3344433 2346789999999
Q ss_pred cCccccccCCCCCCceEEEEEchhHHhcCCCceeeeeecCCCCcceeee-cccccccccccccCCCccchhHHHHHHHHH
Q 001586 355 SAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVA-MQTREQHIRRDKATSNICTAQALLANMAAM 433 (1049)
Q Consensus 355 s~k~lg~P~~~GGP~~G~l~~~~~l~~~lpgrivG~s~d~~g~~~~~l~-lqtreq~irrekaTsni~t~~~l~a~~aa~ 433 (1049)
|++|+.+| +|+|++++++++.+.+++...|+.... .+.+. ...+....|++.||.|+ ..++++.+++
T Consensus 218 s~~K~~gp-----~G~g~l~~~~~~~~~~~~~~~g~~~~~----~~~~~~~~~~~~~~~~~~gt~~~---~~~~al~~al 285 (403)
T TIGR01979 218 SGHKMYGP-----TGIGVLYGKEELLEQMPPFLGGGEMIA----EVSFEETTYNEAPHKFEAGTPNI---AGVIGLGAAI 285 (403)
T ss_pred ecccccCC-----CCceEEEEchHHHhcCCCeecCCCcee----ecccCccccCCChhhcCCCCccH---HHHHHHHHHH
Confidence 99445333 358999999999888877655532110 00000 00112234567788887 4555655555
Q ss_pred HHHHhCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEcCCC----CcceEEEecCC--HHHHHHHHHHcCCeeeee-----
Q 001586 434 YAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLP----FFDTVKVKCAD--AHAIASAAYKIEMNLRVV----- 502 (1049)
Q Consensus 434 y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~g~~~v~~~~----~~~~v~i~~~~--~~~v~~~L~~~gI~~~~~----- 502 (1049)
.++...|++++.+++.+++++++++|+++++++++.+. ....++|.+++ ..++.+.|.++||.++..
T Consensus 286 --~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~g~~~~~ 363 (403)
T TIGR01979 286 --DYLEAIGLENIEAHEHELTAYALERLGEIPGLRIYGPRDAEDRGGIISFNVEGVHPHDVGTILDEEGIAVRSGHHCAQ 363 (403)
T ss_pred --HHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCccccCceEEEEeCCcCHHHHHHHHhhCCEEEcchhhhhH
Confidence 55556688999999999999999999988449987532 23456676655 678999999999987531
Q ss_pred -------cCCeEEEEeccCCCHHHHHHHHHHHh
Q 001586 503 -------DSNTVTASFDETTTLEDVDKLFIVFA 528 (1049)
Q Consensus 503 -------~~~~vris~~~~~t~edid~lv~aL~ 528 (1049)
.++.+|+|++.+||++|+|+|+++|+
T Consensus 364 ~~~~~~~~~~~iRiS~~~~~t~~di~~l~~~l~ 396 (403)
T TIGR01979 364 PLMRRFGVPATCRASFYIYNTEEDIDALVEALK 396 (403)
T ss_pred HHHHHhCCCCEEEEEeccCCCHHHHHHHHHHHH
Confidence 14789999999999999999999996
No 39
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.93 E-value=4.4e-24 Score=250.53 Aligned_cols=293 Identities=13% Similarity=0.089 Sum_probs=212.3
Q ss_pred HHhCCCCcceEeccchHHHHHHHHHHhhhccC-CCCEEEEcCCCCHHHHHHHHHhhcCCCeEE----EEeCc--------
Q 001586 222 DLTGLPMSNASLLDEGTAAAEAMAMCNNIQKG-KKKTFIIASNCHPQTIDICITRADGFDIKV----VVSDL-------- 288 (1049)
Q Consensus 222 ~L~G~~~~n~sl~~~~Ta~~eA~~~a~~~~~~-~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v----~~v~~-------- 288 (1049)
+|+|+++.++.+++++|.++..++.++ +..+ ++++|++++.+||++...|+..++..|+++ +.++.
T Consensus 80 ~l~g~~~~~v~~~~~~t~~l~~~~~~~-~~~~~~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~ 158 (406)
T TIGR01814 80 RLVGAKEDEVVVMNTLTINLHLLLASF-YKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLTVEESMVQIEPREEETLRL 158 (406)
T ss_pred cccCCCCCcEEEeCCchHHHHHHHHHh-cCCcCCccEEEecCCCCChHHHHHHHHHHhcCCCcccceEEeccCCCCccCH
Confidence 899999989999999997777665554 2211 234788999999999998876566678776 34432
Q ss_pred chhhc-c---CCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCC-CCCCcccceEEEecC-ccccc
Q 001586 289 KDIDY-K---SGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTIL-KPPGELGADIVVGSA-QRFGV 361 (1049)
Q Consensus 289 ~~l~~-l---~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l-~~p~~~GaDivvgs~-k~lg~ 361 (1049)
+++++ + +++|++|+++++ |.+|.+.|+++|+++||++|++++|++ ..++|.+ .+..++|+|++++++ |+|+
T Consensus 159 ~~l~~~~~~~~~~t~lv~~~~v~~~tG~~~~~~~i~~~~~~~g~~~~vD~-aq~~G~~~id~~~~gvD~~~~s~hK~l~- 236 (406)
T TIGR01814 159 EDILDTIEKNGDDIAVILLSGVQYYTGQLFDMAAITRAAHAKGALVGFDL-AHAVGNVPLDLHDWGVDFACWCTYKYLN- 236 (406)
T ss_pred HHHHHHHHhcCCCeEEEEEeccccccceecCHHHHHHHHHHcCCEEEEEc-ccccCCcccccccCCCCEEEEcCccccC-
Confidence 34444 3 578999999987 678999999999999999999999942 3466654 345689999999999 5453
Q ss_pred cCCCCCCceEEEEEchhHHhcCCCceeeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcc
Q 001586 362 PMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPE 441 (1049)
Q Consensus 362 P~~~GGP~~G~l~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irrekaTsni~t~~~l~a~~aa~y~~~~g~~ 441 (1049)
|||| |+++++++....+.+++.||.-..... .|........+..|++.||+|+ .+++++.+++ .++...
T Consensus 237 ----g~pG-~~l~v~~~~~~~~~p~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~GT~~~---~~~~~l~~al--~~~~~~ 305 (406)
T TIGR01814 237 ----AGPG-AGAFVHEKHAHTERPRLAGWWGHARPT-RFKMDNTLGLIPCGFRISNPPI---LSVAALRGSL--DIFDQA 305 (406)
T ss_pred ----CCCC-eEEEEehhhhhhcCCCCCcccCCCCcc-ccccccccCCCccceeeCCccH---HHHHHHHHHH--HHHHhc
Confidence 4576 667776655545656666752111110 0111110112334778899998 5677777776 666677
Q ss_pred hHHHHHHHHHHHHHHHHHHhhcC-C---CeEEcCCC----CcceEEEecC-CHHHHHHHHHHcCCeeeeecCCeEEEEe-
Q 001586 442 GLKTIAQRVHGLAGTFALGLKKL-G---TVEVQGLP----FFDTVKVKCA-DAHAIASAAYKIEMNLRVVDSNTVTASF- 511 (1049)
Q Consensus 442 Gl~~ia~~~~~~a~~l~~~L~~~-g---~~~v~~~~----~~~~v~i~~~-~~~~v~~~L~~~gI~~~~~~~~~vris~- 511 (1049)
|++++.+++..+++++++.|+++ | +++++++. ....++|.++ .+.++.++|.++||.+....++.+|+|+
T Consensus 306 g~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~i~~~~~~~~r~~~v~~~~~~~~~~~~~~L~~~gi~v~~~~~~~iRiS~~ 385 (406)
T TIGR01814 306 GMEALRKKSLLLTDYLEELIKARCGGPPVLTIITPRDHAQRGCQLSLTHPVPGKAVFQALIKRGVIGDKREPSVIRVAPV 385 (406)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhhcCCCCceEEeCCCChhhcCCeEEEEecCCHHHHHHHHHHCCEEEeccCCCeEEEech
Confidence 89999999999999999999875 2 37777531 2235777776 4788999999999987654457899999
Q ss_pred ccCCCHHHHHHHHHHHh
Q 001586 512 DETTTLEDVDKLFIVFA 528 (1049)
Q Consensus 512 ~~~~t~edid~lv~aL~ 528 (1049)
+.+||++|||+++++|+
T Consensus 386 ~~~nt~~did~l~~~l~ 402 (406)
T TIGR01814 386 PLYNTFVDVYDAVNVLE 402 (406)
T ss_pred hccCCHHHHHHHHHHHH
Confidence 68999999999999996
No 40
>PLN02651 cysteine desulfurase
Probab=99.93 E-value=1e-23 Score=243.86 Aligned_cols=283 Identities=17% Similarity=0.138 Sum_probs=215.2
Q ss_pred hhHHHHHHHHHHHHHHHhCCCCcceEeccchHHHHHHHHHHh-hhccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEE
Q 001586 207 QGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCN-NIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVV 285 (1049)
Q Consensus 207 qg~le~l~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a~-~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~ 285 (1049)
....+.+.++++.+++++|.+..++.++.++|.++..++.+. ....++|++||++..+||++...|+.+. ..|++++.
T Consensus 39 ~~~~~~~~~~r~~la~~~g~~~~~v~~t~~~t~a~~~~l~~~~~~~~~~g~~vl~~~~~h~s~~~~~~~~~-~~g~~v~~ 117 (364)
T PLN02651 39 WESEDAVEKARAQVAALIGADPKEIIFTSGATESNNLAIKGVMHFYKDKKKHVITTQTEHKCVLDSCRHLQ-QEGFEVTY 117 (364)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhccCCCCEEEEcccccHHHHHHHHHHH-hcCCEEEE
Confidence 445677889999999999999888999999987655444332 2112378999999999999999887654 57899888
Q ss_pred eCc--------chhhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCC-CCCCcccceEEEe
Q 001586 286 SDL--------KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTIL-KPPGELGADIVVG 354 (1049)
Q Consensus 286 v~~--------~~l~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l-~~p~~~GaDivvg 354 (1049)
++. +++++ +++++++|+++++ |.+|.+.|+++|+++||++|++++|++ ..+.|.+ .++.+||+|++++
T Consensus 118 v~~~~~~~~d~~~l~~~i~~~t~lv~v~~~~n~tG~~~~l~~I~~~~~~~g~~~~vD~-a~~~g~~~~~~~~~~~D~~~~ 196 (364)
T PLN02651 118 LPVKSDGLVDLDELAAAIRPDTALVSVMAVNNEIGVIQPVEEIGELCREKKVLFHTDA-AQAVGKIPVDVDDLGVDLMSI 196 (364)
T ss_pred EccCCCCcCCHHHHHHhcCCCcEEEEEECCCCCceecccHHHHHHHHHHcCCEEEEEc-chhhCCcccCcccCCCCEEEe
Confidence 765 23555 7889999999886 789999999999999999999999943 3355533 3567899999999
Q ss_pred cCccccccCCCCCCceEEEEEchhHHhcCCCceeeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHH
Q 001586 355 SAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMY 434 (1049)
Q Consensus 355 s~k~lg~P~~~GGP~~G~l~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irrekaTsni~t~~~l~a~~aa~y 434 (1049)
+++||++| +|.|++++++++..++++.+.|.. . ..+++.||.|+ .+++++.+++
T Consensus 197 s~hK~~gp-----~G~g~l~v~~~~~~~l~p~~~g~~------~-----------~~~~~~GT~~~---~~~~~l~~al- 250 (364)
T PLN02651 197 SGHKIYGP-----KGVGALYVRRRPRVRLEPLMSGGG------Q-----------ERGRRSGTENT---PLVVGLGAAC- 250 (364)
T ss_pred chhhhCCC-----CceEEEEEcCCCCCCCCccccCCC------c-----------cCCccCCCccH---HHHHHHHHHH-
Confidence 99667544 468999999988888877666521 1 12456899998 5777888887
Q ss_pred HHHhCcchHHHHHHHHHHHHHHHHHHhhc-CCCeEEcCC--CC---cceEEEecCC--HHHHHHHHHHcCCeeee-----
Q 001586 435 AVYHGPEGLKTIAQRVHGLAGTFALGLKK-LGTVEVQGL--PF---FDTVKVKCAD--AHAIASAAYKIEMNLRV----- 501 (1049)
Q Consensus 435 ~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~-~g~~~v~~~--~~---~~~v~i~~~~--~~~v~~~L~~~gI~~~~----- 501 (1049)
.++.. +.+++.+++..++++++++|++ +.|++++.+ +. ...++|.+++ +++++++|.+ |.++.
T Consensus 251 -~~~~~-~~~~i~~~~~~l~~~l~~~l~~~~~~~~i~~~~~~~~~~~~i~~~~~~~~~~~~~~~~L~~--i~v~~g~~c~ 326 (364)
T PLN02651 251 -ELAMK-EMDYDEKHMKALRERLLNGLRAKLGGVRVNGPRDPEKRYPGTLNLSFAYVEGESLLMGLKE--VAVSSGSACT 326 (364)
T ss_pred -HHHHH-hHHHHHHHHHHHHHHHHHHHHhhCCCEEEECCCCcccCcCCEEEEEeCCCCHHHHHHHhCC--EEEEchhhcC
Confidence 34333 4589999999999999999986 534998853 21 2367777776 7789998865 65521
Q ss_pred ------------e------cCCeEEEEeccCCCHHHHH
Q 001586 502 ------------V------DSNTVTASFDETTTLEDVD 521 (1049)
Q Consensus 502 ------------~------~~~~vris~~~~~t~edid 521 (1049)
+ ..+.||+|++.+||++|||
T Consensus 327 ~~~~~~~~~~~~~g~~~~~~~~~vR~S~~~~~t~~did 364 (364)
T PLN02651 327 SASLEPSYVLRALGVPEEMAHGSLRLGVGRFTTEEEVD 364 (364)
T ss_pred CCCCCcCHHHHHcCCChHHhCceEEEEcCCCCCHHHcC
Confidence 0 1378999999999999986
No 41
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.93 E-value=1.7e-23 Score=244.74 Aligned_cols=298 Identities=19% Similarity=0.189 Sum_probs=222.4
Q ss_pred hhhHHHHHHHHHHHHHHHhCCCCcceEeccchHHHHHHHHHHhhhccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEE
Q 001586 206 AQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVV 285 (1049)
Q Consensus 206 sqg~le~l~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a~~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~ 285 (1049)
+++..+.+.++++.+++++|.+..++.+..++|.++..+..++....++|++||+++.+|+++...+...++..|++++.
T Consensus 55 ~~~~~~~~~~l~~~ia~~~~~~~~~v~~~~~~t~~l~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~~~~ 134 (397)
T TIGR01976 55 SRRADQVVDDAREAVADLLNADPPEVVFGANATSLTFLLSRAISRRWGPGDEVIVTRLDHEANISPWLQAAERAGAKVKW 134 (397)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCCeEEEeCCHHHHHHHHHHHHHhcCCCCCEEEEcCCchHhHHHHHHHHHHhcCCEEEE
Confidence 46677788899999999999987788888888866655444432112378999999999999998887667778999888
Q ss_pred eCcc---------hhhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCC-CCCCcccceEEE
Q 001586 286 SDLK---------DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTIL-KPPGELGADIVV 353 (1049)
Q Consensus 286 v~~~---------~l~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l-~~p~~~GaDivv 353 (1049)
++.+ ++++ +++++++|++.+| |++|.+.|+++|+++||++|++++|+. ..+.+.. .+..++|+|+++
T Consensus 135 ~~~~~~~~~~~~~~l~~~i~~~~~lv~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~-a~~~~~~~~~~~~~~~d~~~ 213 (397)
T TIGR01976 135 ARVDEATGELHPDDLASLLSPRTRLVAVTAASNTLGSIVDLAAITELVHAAGALVVVDA-VHYAPHGLIDVQATGADFLT 213 (397)
T ss_pred EeccccCCCcCHHHHHHhcCCCceEEEEeCCCCCCCccCCHHHHHHHHHHcCCEEEEeh-hhhccccCCCHHHcCCCEEE
Confidence 7642 3444 6788999999998 789999999999999999999999943 2233322 244678999999
Q ss_pred ecCccccccCCCCCCceEEEEEchhHHhcCCCceeeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHH
Q 001586 354 GSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAM 433 (1049)
Q Consensus 354 gs~k~lg~P~~~GGP~~G~l~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irrekaTsni~t~~~l~a~~aa~ 433 (1049)
+|++|+. ||..|++++++++++++.+....+ .. .....|++.||.|+ ..+.++.+++
T Consensus 214 ~s~~K~~------g~~~G~l~~~~~~~~~l~~~~~~~----------~~----~~~~~~~~~gt~~~---~~~~~l~~al 270 (397)
T TIGR01976 214 CSAYKFF------GPHMGILWGRPELLMNLPPYKLTF----------SY----DTGPERFELGTPQY---ELLAGVVAAV 270 (397)
T ss_pred Eechhhc------CCceEEEEEcHHHHhhCCCccccC----------cc----CCCcchhcCCCCCH---HHHHHHHHHH
Confidence 9984442 245899999999888775533221 11 11233567899887 4455565665
Q ss_pred -HHHHhCc-----------chHHHHHHHHHHHHHHHHHHhhcCCCeEEcCC----CCcceEEEecCC--HHHHHHHHHHc
Q 001586 434 -YAVYHGP-----------EGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL----PFFDTVKVKCAD--AHAIASAAYKI 495 (1049)
Q Consensus 434 -y~~~~g~-----------~Gl~~ia~~~~~~a~~l~~~L~~~g~~~v~~~----~~~~~v~i~~~~--~~~v~~~L~~~ 495 (1049)
++...|. ++++++.+++.+++++++++|+++++++++.+ ...+.+.+..++ +.++.++|.++
T Consensus 271 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 350 (397)
T TIGR01976 271 DYLAGLGESANGSRRERLVASFQAIDAYENRLAEYLLVGLSDLPGVTLYGVARLAARVPTVSFTVHGLPPQRVVRRLADQ 350 (397)
T ss_pred HHHHHhCcccccchhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCccCCCceEEEEeCCcCHHHHHHHHHHC
Confidence 3344442 14788899999999999999999866888743 133456666654 67899999999
Q ss_pred CCeeeee---------------cCCeEEEEeccCCCHHHHHHHHHHH
Q 001586 496 EMNLRVV---------------DSNTVTASFDETTTLEDVDKLFIVF 527 (1049)
Q Consensus 496 gI~~~~~---------------~~~~vris~~~~~t~edid~lv~aL 527 (1049)
||.++.. ..+.+|+|++.++|++|||+|+++|
T Consensus 351 gI~v~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l 397 (397)
T TIGR01976 351 GIDAWAGHFYAVRLLRRLGLNDEGGVVRVGLAHYNTAEEVDRLLEAL 397 (397)
T ss_pred CeEEEeCccchHHHHHHhCCCCCCCeEEEEeeccCCHHHHHHHHHhC
Confidence 9988642 1357999999999999999999875
No 42
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.93 E-value=2.4e-23 Score=241.25 Aligned_cols=361 Identities=18% Similarity=0.240 Sum_probs=235.5
Q ss_pred CHHHHHHHHHHHhccccCcCccccccccccccCccccccccccCcccccCCCCCchhhhhcHHHHHHHHHHHHHHhhCCC
Q 001586 569 TEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFD 648 (1049)
Q Consensus 569 se~e~~~~l~~l~~~d~~~~~~~i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~~G~~~~i~el~~~la~l~G~~ 648 (1049)
||+|++..+.++.+.++....+.+.+..|++..+...+.+.....+.. .++ ...+|..++..++++++++++|++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~la~~~g~~ 75 (373)
T TIGR03812 1 SEEEVLEELKEYRSEDLKYSDGRILGSMCTNPHPIAVKAYDMFIETNL-GDP----GLFPGTKKIEEEVVGSLGNLLHLP 75 (373)
T ss_pred CHHHHHHHHHHHHhcCCCCCCCcEEEEEeCCchHHHHHHHHHHhhcCC-CCc----ccCccHHHHHHHHHHHHHHHhCCC
Confidence 689999999999888776533343334455554443332211101111 111 122456677889999999999997
Q ss_pred ccc-cccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCEEEEEcCCCCCCCCHHHHHHHHHhc
Q 001586 649 SFS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEAN 727 (1049)
Q Consensus 649 ~~~-l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~Vv~V~~d~~g~iD~~~L~~~i~~~ 727 (1049)
... +..++|+.+...++.+++.... .+ .++++|+++...|.++...++..|++++.+++++++.+|+++|+++++
T Consensus 76 ~~~~~~~~g~~~~~~~~~~~~~~~~~-~~-~~g~~vl~~~~~h~~~~~~~~~~G~~~~~v~~~~~~~~d~~~l~~~l~-- 151 (373)
T TIGR03812 76 DAYGYIVSGGTEANIQAVRAAKNLAR-EE-KRTPNIIVPESAHFSFEKAAEMLGLELRYAPLDEDYTVDVKDVEDLID-- 151 (373)
T ss_pred CCCeEEeccHHHHHHHHHHHHHHHHh-cc-CCCcEEEECCcchHHHHHHHHHcCCeEEEEeeCCCCCcCHHHHHHHHh--
Confidence 643 4455555544333333332111 11 245789999988877777788899999999998889999999999997
Q ss_pred CCCeEEEEEEcC-CccccccccHHHHHHHHHHcCCEEEEeccccccccCcC-----CCC----ccCCcEEEeCCCccccc
Q 001586 728 RDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT-----SPG----YIGADVCHLNLHKTFCI 797 (1049)
Q Consensus 728 ~~~taaV~it~P-n~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~-----~Pg----~~GaDi~~~s~hK~f~~ 797 (1049)
+++.++++..| |.+|.+. |+++|+++||++|++++||+|+.....++. .+. ..|+|++++++||+...
T Consensus 152 -~~~~~vv~~~~~~~tG~~~-~~~~i~~l~~~~~~~livD~a~~~~~~~~~~~~~~~~~~d~~~~~~d~~~~s~~K~~~~ 229 (373)
T TIGR03812 152 -DNTIGIVGIAGTTELGQID-DIEELSKIALENGIYLHVDAAFGGFVIPFLKKGYNPPPFDFSLPGVQSITIDPHKMGLS 229 (373)
T ss_pred -hCcEEEEEECCCCCCCccC-CHHHHHHHHHHcCCeEEEEcCchhHHHHHHhcCCCCCCccccCCCCCEEEECccccCCC
Confidence 55554444445 4589998 799999999999999999998742221111 111 24889999999996532
Q ss_pred CCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHH
Q 001586 798 PHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAIL 877 (1049)
Q Consensus 798 P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~ 877 (1049)
| .|+.|+++.++++.+.+......... .+.. ...++ + +...++.+++.+..++.+|+.+..++..+
T Consensus 230 ~----~~~G~~~~~~~~~~~~l~~~~~~~~~-----~~~~--~~~gt-~--~~~~~~~~~~~l~~l~~~g~~~~~~~~~~ 295 (373)
T TIGR03812 230 P----IPAGGILFRSKSYLKYLSVDAPYLTV-----KKQA--TITGT-R--SGASAAATYAVIKYLGREGYRKIVAECME 295 (373)
T ss_pred c----CCceEEEEeCHHHHhhhcccCcccCC-----CCCc--ceEee-c--hhHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 2 22335665666655544211000000 0000 00011 1 12334567788899999999999999999
Q ss_pred HHHHHHHHHhcc-CCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEccCCCCHH
Q 001586 878 NANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKE 956 (1049)
Q Consensus 878 ~a~yL~~~L~~~-~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~e 956 (1049)
++++|+++|+++ +...+. +..+.+.+.++ +..++.++|.++||.+..... ++.+|++++..+|++
T Consensus 296 ~~~~l~~~L~~~g~~~~~~----~~~~~v~~~~~--------~~~~v~~~L~~~gi~v~~~~~--~~~iRis~~~~~t~e 361 (373)
T TIGR03812 296 NTRYLVEELKKIGFEPVIE----PVLNIVAFEVD--------DPEEVRKKLRDRGWYVSVTRC--PKALRIVVMPHVTRE 361 (373)
T ss_pred HHHHHHHHHHhCCCeEEcC----CCceEEEEEeC--------CHHHHHHHHHHCCceeccCCC--CCEEEEEEECCCCHH
Confidence 999999999886 333322 23333444432 346899999999999865432 478999999999999
Q ss_pred HHHHHHHHHHHH
Q 001586 957 ELDRYCDALISI 968 (1049)
Q Consensus 957 eid~fv~aL~~i 968 (1049)
|+|+|+++|++|
T Consensus 362 did~l~~~L~~~ 373 (373)
T TIGR03812 362 HIEEFLEDLKEI 373 (373)
T ss_pred HHHHHHHHHhhC
Confidence 999999999764
No 43
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.93 E-value=3.2e-23 Score=240.97 Aligned_cols=292 Identities=16% Similarity=0.170 Sum_probs=217.9
Q ss_pred hhhHHHHHHHHHHHHHHHhCCCCcceEeccchHHHHHHHHHHhhhccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEE
Q 001586 206 AQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVV 285 (1049)
Q Consensus 206 sqg~le~l~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a~~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~ 285 (1049)
+....+.+.++++.+++++|.+..++.+++++|.++..++.++.....++++||++..+||++...++.+. ..|++++.
T Consensus 37 ~~~~~~~~~~~r~~la~~~g~~~~~i~~t~~~t~a~~~al~~~~~~~~~~~~vv~~~~~~~s~~~~~~~~~-~~G~~v~~ 115 (379)
T TIGR03402 37 GGEVGKAVEEAREQVAKLLGAEPDEIIFTSGGTESDNTAIKSALAAQPEKRHIITTAVEHPAVLSLCQHLE-KQGYKVTY 115 (379)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHHHHHHHHhcCCCCeEEEcccccHHHHHHHHHHH-HcCCEEEE
Confidence 44557778899999999999998889999999987776665432111256899999999999999887654 47999988
Q ss_pred eCc--------chhhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCC-CCCcccceEEEe
Q 001586 286 SDL--------KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVVG 354 (1049)
Q Consensus 286 v~~--------~~l~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~-~p~~~GaDivvg 354 (1049)
++. +++++ +++++++|+++++ |.+|.+.|+++|+++||++|++++|++ ..+.|... +..++|+|+++.
T Consensus 116 v~~~~~g~~~~~~l~~~i~~~~~lv~i~~~~n~tG~~~~~~~I~~l~~~~g~~vivD~-~~~~g~~~~~~~~~~~D~~~~ 194 (379)
T TIGR03402 116 LPVDEEGRLDLEELRAAITDDTALVSVMWANNETGTIFPIEEIGEIAKERGALFHTDA-VQAVGKIPIDLKEMNIDMLSL 194 (379)
T ss_pred EccCCCCcCCHHHHHHhcCCCcEEEEEEcccCCeeecccHHHHHHHHHHcCCEEEEEC-cccccccccCcccCCCCEEEE
Confidence 764 24555 7788999999886 789999999999999999999999943 33555432 456799999999
Q ss_pred cCccccccCCCCCCceEEEEEchhHHhcCCCceeeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHH
Q 001586 355 SAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMY 434 (1049)
Q Consensus 355 s~k~lg~P~~~GGP~~G~l~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irrekaTsni~t~~~l~a~~aa~y 434 (1049)
|++|+++| +|+|+++++++. .+.+.+.|. .. ..+++.||.|+ .+++++.+++
T Consensus 195 s~~K~~gp-----~G~g~l~v~~~~--~~~p~~~g~------~~-----------~~~~~~gt~~~---~~~~~l~~al- 246 (379)
T TIGR03402 195 SGHKLHGP-----KGVGALYIRKGT--RFRPLLRGG------HQ-----------ERGRRAGTENV---PGIVGLGKAA- 246 (379)
T ss_pred cHHHcCCC-----CceEEEEECCCC--CCCCcccCC------cc-----------CCCcCCCCccH---HHHHHHHHHH-
Confidence 99557544 458999998764 233333331 00 01234688888 5677777776
Q ss_pred HHHhCcchHHHHHHHHHHHHHHHHHHhhc-CCCeEEcCCC--C-cceEEEecCC--HHHHHHHHHHcCCeeeee------
Q 001586 435 AVYHGPEGLKTIAQRVHGLAGTFALGLKK-LGTVEVQGLP--F-FDTVKVKCAD--AHAIASAAYKIEMNLRVV------ 502 (1049)
Q Consensus 435 ~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~-~g~~~v~~~~--~-~~~v~i~~~~--~~~v~~~L~~~gI~~~~~------ 502 (1049)
.++ .++++++.+++.++.++++++|++ +.++++..++ . ...++|.++. +.++.+.|.++||.++.-
T Consensus 247 -~~~-~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gI~v~~g~~c~~~ 324 (379)
T TIGR03402 247 -ELA-TEHLEEENTRVRALRDRLEAGLLARIPDARLNGDPTKRLPNTVNISFEYIEGEAILLLLDMEGICASSGSACTSG 324 (379)
T ss_pred -HHH-HHhHHHHHHHHHHHHHHHHHHHHhhCCCEEEeCCCccCCCCEEEEEecCCCHHHHHHhhccCCEEEEchhhcCCC
Confidence 232 346788889999999999999985 6448877532 2 1345555554 788999998899987521
Q ss_pred -----------------cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001586 503 -----------------DSNTVTASFDETTTLEDVDKLFIVFAG 529 (1049)
Q Consensus 503 -----------------~~~~vris~~~~~t~edid~lv~aL~~ 529 (1049)
..+.||+|++.+||++|||+++++|+.
T Consensus 325 ~~~~~~~~~~lg~~~~~~~~~vR~S~~~~~t~~di~~~~~~l~~ 368 (379)
T TIGR03402 325 SLEPSHVLRAMGVPHTAAHGSIRFSLSRYNTEEDIDYVLEVLPP 368 (379)
T ss_pred CCCcCHHHHHcCCChhhcCceEEEEcCCCCCHHHHHHHHHHHHH
Confidence 136899999999999999999999974
No 44
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.92 E-value=4.4e-23 Score=239.06 Aligned_cols=306 Identities=18% Similarity=0.147 Sum_probs=228.4
Q ss_pred hhhHHHHHHHHHHHHHHHhCCC-CcceEeccchHHHHHHHHHHhhhccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEE
Q 001586 206 AQGRLESLLNFQTMIADLTGLP-MSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVV 284 (1049)
Q Consensus 206 sqg~le~l~e~q~~ia~L~G~~-~~n~sl~~~~Ta~~eA~~~a~~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~ 284 (1049)
++...+.+.+.++.+++++|.+ ..++.+++|+|.++..++.++.....++++||++...|++....+...++..|++++
T Consensus 38 ~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~ 117 (373)
T cd06453 38 SARATDAYEAAREKVARFINAPSPDEIIFTRNTTEAINLVAYGLGRANKPGDEIVTSVMEHHSNIVPWQQLAERTGAKLK 117 (373)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCCHHHHHHHHHHHhhhcCCCCCEEEECcchhHHHHHHHHHHHhhcCcEEE
Confidence 4566777888999999999998 678889999997766655554321126799999999999988877766667899998
Q ss_pred EeCcc--------hhhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCC-CCCcccceEEE
Q 001586 285 VSDLK--------DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVV 353 (1049)
Q Consensus 285 ~v~~~--------~l~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~-~p~~~GaDivv 353 (1049)
.++.+ ++++ +++++++|++.+| |++|.+.|+++|.++||++|+++++++ ..+.+.+. +..++|+|+++
T Consensus 118 ~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~li~D~-a~~~~~~~~~~~~~~~d~~~ 196 (373)
T cd06453 118 VVPVDDDGQLDLEALEKLLTERTKLVAVTHVSNVLGTINPVKEIGEIAHEAGVPVLVDG-AQSAGHMPVDVQDLGCDFLA 196 (373)
T ss_pred EeecCCCCCcCHHHHHHHhcCCceEEEEeCcccccCCcCCHHHHHHHHHHcCCEEEEEh-hhhcCceeeeccccCCCEEE
Confidence 88653 4555 6778999999887 789999999999999999999999953 33444432 34578999999
Q ss_pred ecC-ccccccCCCCCCceEEEEEchhHHhcCCCceeeeee-cCCCCcceeeecccccccccccccCCCccchhHHHHHHH
Q 001586 354 GSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSI-DSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMA 431 (1049)
Q Consensus 354 gs~-k~lg~P~~~GGP~~G~l~~~~~l~~~lpgrivG~s~-d~~g~~~~~l~lqtreq~irrekaTsni~t~~~l~a~~a 431 (1049)
+|+ |+|+ +|+.|++++++++.+.+.....|+.. +......+ +....+.+++.+|+|++ +++++.+
T Consensus 197 ~s~~K~~~------~~g~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~----~~~~~~~~~~~~t~~~~---~~~al~~ 263 (373)
T cd06453 197 FSGHKMLG------PTGIGVLYGKEELLEEMPPYGGGGEMIEEVSFEET----TYADLPHKFEAGTPNIA---GAIGLGA 263 (373)
T ss_pred eccccccC------CCCcEEEEEchHHhhcCCCeecCCCcccccccccc----ccCCCccccCCCCCCHH---HHHHHHH
Confidence 998 5453 25679999999998888765544321 10000001 11234455677888874 4556666
Q ss_pred HHHHHHhCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEcCCC--CcceEEEecCC--HHHHHHHHHHcCCeeeee-----
Q 001586 432 AMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLP--FFDTVKVKCAD--AHAIASAAYKIEMNLRVV----- 502 (1049)
Q Consensus 432 a~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~g~~~v~~~~--~~~~v~i~~~~--~~~v~~~L~~~gI~~~~~----- 502 (1049)
++ .++..+|++++.++..++++++++.|+++++++++.++ ....+.|.+++ +.++.++|.++||.++..
T Consensus 264 al--~~l~~~g~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~gi~i~~g~~~~~ 341 (373)
T cd06453 264 AI--DYLEKIGMEAIAAHEHELTAYALERLSEIPGVRVYGDAEDRAGVVSFNLEGIHPHDVATILDQYGIAVRAGHHCAQ 341 (373)
T ss_pred HH--HHHHHcCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCccccCCeEEEEECCcCHHHHHHHHHHCCEEeccCccchh
Confidence 65 67777899999999999999999999998558887422 23356666654 678999999999987421
Q ss_pred -------cCCeEEEEeccCCCHHHHHHHHHHH
Q 001586 503 -------DSNTVTASFDETTTLEDVDKLFIVF 527 (1049)
Q Consensus 503 -------~~~~vris~~~~~t~edid~lv~aL 527 (1049)
..+.||+|++.++|++|+|+|+++|
T Consensus 342 ~~~~~~~~~~~iRis~~~~~t~~di~~~~~~l 373 (373)
T cd06453 342 PLMRRLGVPGTVRASFGLYNTEEEIDALVEAL 373 (373)
T ss_pred HHHHHhCCCCeEEEEecCCCCHHHHHHHHhhC
Confidence 1468999999999999999999875
No 45
>PLN02590 probable tyrosine decarboxylase
Probab=99.92 E-value=4.1e-23 Score=245.94 Aligned_cols=383 Identities=13% Similarity=0.083 Sum_probs=246.9
Q ss_pred CCCCCHHHHHHHHHHHhccccCcCccccccccccc---cCccccccccccCcccccCCCCCchhhhhcHHHHHHHHHHHH
Q 001586 565 NKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTM---KLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWL 641 (1049)
Q Consensus 565 ~~~~se~e~~~~l~~l~~~d~~~~~~~i~lGs~t~---~~~~~~~~~~~~~~~f~~~~P~~p~e~~~G~~~~i~el~~~l 641 (1049)
.++.+-+++++.+.+.-.....-....-++|+... +..-..+++. ...+.+.+.. +.+++..+++.++.+|+
T Consensus 105 ~~g~~~~~il~~~~~~i~p~~~~~~hP~f~a~~~~~~~~~~~lgd~l~----sa~n~~~~~~-~~sPa~t~lE~~vi~wl 179 (539)
T PLN02590 105 ERPESLKELLDDVSKKIMPGITHWQSPSYFAYYASSTSVAGFLGEMLN----AGLSVVGFTW-LTSPAATELEIIVLDWL 179 (539)
T ss_pred CCCCCHHHHHHHHHHHHhccCCcCCCCCeeEeccCCCcHHHHHHHHHH----HhcccccCCc-ccCchhHHHHHHHHHHH
Confidence 45678889999998765544332223334554211 1111112221 1122233443 67788889999999999
Q ss_pred HHhhCCCcc--------ccccCchHHHHHHHHHHHHHHHH-hcCCC--CCCEEEEcCCCCCccHHHHHhcCC---EEEEE
Q 001586 642 CTITGFDSF--------SLQPNAGAAGEYAGLMVIRAYHK-ARGDH--HRNVCIIPVSAHGTNPATAAMCGM---KIVSV 707 (1049)
Q Consensus 642 a~l~G~~~~--------~l~~~sGa~ge~a~l~air~y~~-~~G~~--~r~~VLip~saHg~~pa~a~~~G~---~Vv~V 707 (1049)
++++|++.. -+..++|+++++.++.++|.... ..|.. ++-.|++++.+|.+..+++.+.|+ +++.|
T Consensus 180 ~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~~~~~~~vvy~S~~aH~Sv~KAa~ilGlg~~~vr~V 259 (539)
T PLN02590 180 AKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQLVVYGSDQTHSSFRKACLIGGIHEENIRLL 259 (539)
T ss_pred HHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcccCCCCEEEEecCCchHHHHHHHHHcCCCcccEEEE
Confidence 999999852 23456677777777777765432 12221 233566789899999999999998 68999
Q ss_pred cCCC--CCCCCHHHHHHHHHhc---CCCeEEEEEEcCCc-cccccccHHHHHHHHHHcCCEEEEeccccccccCcCCC--
Q 001586 708 GTDA--KGNINIEELRKAAEAN---RDNLSTLMVTYPST-HGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSP-- 779 (1049)
Q Consensus 708 ~~d~--~g~iD~~~L~~~i~~~---~~~taaV~it~Pn~-~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~P-- 779 (1049)
|+|. ++++|+++|+++|++. ...+.+|+.+..+| +|.|| ||++|+++|+++|+|+|||||..... +..|
T Consensus 260 p~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiD-pl~~Ia~i~~~~g~WlHVDaA~GG~a--l~~~~~ 336 (539)
T PLN02590 260 KTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAVD-PLVPLGNIAKKYGIWLHVDAAYAGNA--CICPEY 336 (539)
T ss_pred eCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccC-CHHHHHHHHHHhCCeEEEecchhhhh--hcChhh
Confidence 9984 5799999999999742 12467788888876 89999 79999999999999999999753211 1223
Q ss_pred -----CccCCcEEEeCCCcccccCCCCCCCceeEEEEccc--ccc-------cCCCCccccCCCCCCCCCCCCCCCCCcc
Q 001586 780 -----GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH--LAP-------FLPSHPVVSTGGIPAPEKSQPLGTIAAA 845 (1049)
Q Consensus 780 -----g~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~--l~~-------~lpg~~vg~t~~~~~~~~~~~t~~i~sa 845 (1049)
|-..+|.++.|+|||+..|+++ |++.+++. +.. ++.... ....... ....+.... +
T Consensus 337 r~~~~Gie~ADSit~D~HK~l~~p~~c-----g~llvr~~~~l~~a~~~~~~YL~~~~-~~~~~~~-d~~d~~i~l--s- 406 (539)
T PLN02590 337 RKFIDGIENADSFNMNAHKWLFANQTC-----SPLWVKDRYSLIDALKTNPEYLEFKV-SKKDTVV-NYKDWQISL--S- 406 (539)
T ss_pred HHHhcCCccCCEEEECchhhcCcCcCE-----EEEEecCHHHHHHHhhcCHHHhCCcc-cccccCC-CccccCCCC--C-
Confidence 3346899999999999988776 47888853 221 221100 0000000 001111111 1
Q ss_pred chhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc--CCeeeccCCCceeeEEEEeccCcccc-C--CCCH
Q 001586 846 PWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEFIVDLRGLKNT-A--GIEP 920 (1049)
Q Consensus 846 ~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~--~~v~~~g~~g~~~~e~iv~~~~~~~~-~--g~~~ 920 (1049)
-...++..|+.|+.+|.+|+++..++.+++|+|+.+.|++. ++++.+ +.+..++|+..+-... . +.-.
T Consensus 407 ---Rr~raLklW~~lr~~G~~G~~~~i~~~~~lA~~~~~~l~~~~~fel~~~----~~l~iVcFr~~~~~~~~~~~~~ln 479 (539)
T PLN02590 407 ---RRFRSLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSFEVVTT----RYFSLVCFRLAPVDGDEDQCNERN 479 (539)
T ss_pred ---CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC----CceEEEEEEecCCCCCHHHHHHHH
Confidence 22345678999999999999999999999999999999875 666532 4455666765421000 0 0012
Q ss_pred HHHHHHHHHCCccc-CCCCCCCCCEEEEEcc-CCCCHHHHHHHHHHHHHHHHHH
Q 001586 921 EDVAKRLMDYGFHG-PTMSWPVPGTLMIEPT-ESESKEELDRYCDALISIREEI 972 (1049)
Q Consensus 921 ~~v~k~L~~~Gi~~-~~~~~p~~~~lri~~t-~~~t~eeid~fv~aL~~i~~~i 972 (1049)
..+.++|.+.|... ....+.-...||+|+. ..+++++||.+++.|.+...++
T Consensus 480 ~~l~~~l~~~G~~~vs~t~~~g~~~lR~~i~n~~T~~~dv~~~~~~i~~~a~~~ 533 (539)
T PLN02590 480 RELLAAVNSTGKIFISHTALSGKFVLRFAVGAPLTEEKHVTEAWQIIQKHASKF 533 (539)
T ss_pred HHHHHHHHhCCCEEEEeeEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHh
Confidence 35667777767653 2111111247899885 5678999999999998775553
No 46
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.92 E-value=1.8e-23 Score=245.28 Aligned_cols=333 Identities=20% Similarity=0.235 Sum_probs=235.9
Q ss_pred CCCCCHHHHHHHHHHHhccccCcCcc-c--cccccccccCccccccccccCcccccCCCCCchhhhhcHHHHHHHHHHHH
Q 001586 565 NKYHTEHELLRYIHLLQSKELSLCHS-M--IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWL 641 (1049)
Q Consensus 565 ~~~~se~e~~~~l~~l~~~d~~~~~~-~--i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~~G~~~~i~el~~~l 641 (1049)
..+..+++++.++..+..+|..+.++ . ...++|.....+...... ..+.+-+...+ +++++..++..++..|+
T Consensus 35 ~~g~p~~~v~~~l~~~~~~d~~~~~~~p~~~~~~~~~~~~~~~a~~~~---~~~~~~nl~d~-~~~p~a~~~E~~~v~~l 110 (460)
T COG0076 35 EKGEPLEEVLDELAELLIKDELYLDGHPRANLAGFCPTRVPPVAAELL---VSALNKNLGDP-DESPAAAELEERVVNML 110 (460)
T ss_pred ccCCchhhHHHHHHHHhhcccccccCCcceEEEccCCCCCHHHHHHHH---HHHHhhcCCCc-ccChhHHHHHHHHHHHH
Confidence 57889999999999998888665432 1 233554433333222221 22333445555 77889999999999999
Q ss_pred HHhhCCCc-c-ccccCchHHHHHHHHHHHHHHHH-hc----CC-CCCCEEEEcCCCCCccHHHHHhcCCEEEEEcCCC-C
Q 001586 642 CTITGFDS-F-SLQPNAGAAGEYAGLMVIRAYHK-AR----GD-HHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA-K 712 (1049)
Q Consensus 642 a~l~G~~~-~-~l~~~sGa~ge~a~l~air~y~~-~~----G~-~~r~~VLip~saHg~~pa~a~~~G~~Vv~V~~d~-~ 712 (1049)
++++|.+. . -.+..+|+++++-+++++|.... .. +. .+.++||+|.++|.++.+++.+.|++++.++.++ +
T Consensus 111 ~~l~~~~~~~~G~~t~GgTean~lal~aar~~~~~~~~~~~~~~~~~P~ii~s~~aH~s~~Kaa~~lG~~~~~v~~~~~~ 190 (460)
T COG0076 111 SDLLGAPEEASGTFTSGGTEANLLALLAARERWRKRALAESGKPGGKPNIVCSETAHFSFEKAARYLGLGLRRVPTVPTD 190 (460)
T ss_pred HHHhCCCCCCceEEEcChHHHHHHHHHHHHHHHHHHhhhcccccCCCCeEEecCcchhHHHHHHHHhCCCceeEEeccCc
Confidence 99999954 2 24455667777666666664332 11 11 1244799999999999999999999999999887 7
Q ss_pred CCCCHHHHHHHHHhcCCCeEE--EEEEcCCc-cccccccHHHHHHHHHHcCCEEEEeccccccccCcCCC-----Cc---
Q 001586 713 GNINIEELRKAAEANRDNLST--LMVTYPST-HGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSP-----GY--- 781 (1049)
Q Consensus 713 g~iD~~~L~~~i~~~~~~taa--V~it~Pn~-~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~P-----g~--- 781 (1049)
.++|+++|+++|+ +++.. |+.+.++| +|.+| ||++|+++|+++|+++|||+| .||+..| +.
T Consensus 191 ~~id~~~l~~~i~---~~t~~g~vV~~aGtT~~G~iD-di~~ia~ia~~~~i~lHVDAA----~GG~~~pf~~~~~~~~f 262 (460)
T COG0076 191 YRIDVDALEEAID---ENTIGGVVVGTAGTTDTGSID-DIEELADIAEEYGIWLHVDAA----FGGFLLPFLEPDGRWDF 262 (460)
T ss_pred cccCHHHHHHHHH---hhccCceEEEEecCCCCCccC-CHHHHHHHHHHcCCcEEEEcc----ccceeecccCccchhhc
Confidence 9999999999998 67776 88888876 99999 899999999999999999987 4554433 22
Q ss_pred --cCCcEEEeCCCcccccCCCCCCCceeEEEEccc--ccc-------cCCCCccccCCCCCCCCCCCCCCCCCccchhhH
Q 001586 782 --IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH--LAP-------FLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSA 850 (1049)
Q Consensus 782 --~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~--l~~-------~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~ 850 (1049)
.++|.++.|+||++..|.+ +|++.+++. +.+ ++|+.. .....+.++.. +
T Consensus 263 ~l~~vdSIt~d~HK~g~aP~~-----~G~il~rd~e~l~~~~~~~~~yl~~~~-------------~~~~ti~~sr~--~ 322 (460)
T COG0076 263 GLEGVDSITVDGHKYGLAPIG-----CGVVLFRDEEALRRILIFADYYLPGGG-------------IPNFTILGSRP--G 322 (460)
T ss_pred CCCCceEEEECcccccCCCCC-----ceEEEEECHHHhhhhhhcccccCCCCC-------------cCceeEeeccc--h
Confidence 2789999999999877754 567888764 322 222210 00011111111 2
Q ss_pred HHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc--CCeeeccCCCceeeEEEEeccCccccCCCC-HHHHHHHH
Q 001586 851 LILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEFIVDLRGLKNTAGIE-PEDVAKRL 927 (1049)
Q Consensus 851 ~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~--~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~-~~~v~k~L 927 (1049)
..+++.|+.|+.+|.+||+++.++++++++|++++|++. ++++.+ |..+.+.|+.++ ..+ ..+..+++
T Consensus 323 ~~~~~~~~~l~~lG~eGy~~l~~~~~~~a~~la~~l~~~~~~e~~~~----p~l~~V~fr~~~-----~~~~~~~~~~~~ 393 (460)
T COG0076 323 RQALALYANLRRLGREGYRKLLDRTLELARYLAEELEKLGDFELVNE----PELPIVAFRLKD-----DEDTLADLSERL 393 (460)
T ss_pred HHHHHHHHHHHHhCHhHHHHHHHHHHHHHHHHHHHHHhCCCcEeecC----CccceEEEEcCC-----cccchhchHHHH
Confidence 256778999999999999999999999999999999985 676532 345556676532 112 45677788
Q ss_pred HHCCcccCCCC
Q 001586 928 MDYGFHGPTMS 938 (1049)
Q Consensus 928 ~~~Gi~~~~~~ 938 (1049)
...||.++...
T Consensus 394 ~~~gw~v~~~~ 404 (460)
T COG0076 394 DRRGWQVPAQL 404 (460)
T ss_pred HhcCceeeccc
Confidence 88999986543
No 47
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.91 E-value=4.3e-22 Score=230.44 Aligned_cols=346 Identities=16% Similarity=0.189 Sum_probs=236.6
Q ss_pred CCCHHHHHHHHHHHhcCCCccccccCCCCCCCCCcHHHHHHHHhCCccccccCCChhhHhhhHHHHHHHHHHHHHHHhCC
Q 001586 147 GLTESQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGL 226 (1049)
Q Consensus 147 ~~sE~e~~~~~~~la~~n~~~~~~lG~g~y~~~~p~~i~~~~~~~~~~~t~ytpyq~e~sqg~le~l~e~q~~ia~L~G~ 226 (1049)
+.+|.||++.|+++++++..+.-|+|..+.+ ..|.++ +.+.+ ++.. .+..+...++..+.+.++++++++++|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~a~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~la~~~g~ 74 (371)
T PRK13520 1 GLSEEEILEELEEYRSEDLKYERILSSMCTE-PHPIAR-KAHEM---FLET-NLGDPGLFPGTAKLEEEAVEMLGELLHL 74 (371)
T ss_pred CCCHHHHHHHHHHHHhcCCCHHHeeeeeecC-chHHHH-HHHHH---HHhc-CCCCcccCccHHHHHHHHHHHHHHHhCC
Confidence 3689999999999999998876787776643 334433 23322 1111 1112222346777788999999999999
Q ss_pred CCcceEeccchHHHHHHHHHHhh-hccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc--------chhhc-cCC
Q 001586 227 PMSNASLLDEGTAAAEAMAMCNN-IQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--------KDIDY-KSG 296 (1049)
Q Consensus 227 ~~~n~sl~~~~Ta~~eA~~~a~~-~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~~--------~~l~~-l~~ 296 (1049)
+..++.++++||.+.++++.+.+ ...+++++||+++..|+++...++ ..|++++.++. +++++ +++
T Consensus 75 ~~~~~~~~~ggt~a~~~a~~~~~~~~~~~~~~vl~~~~~h~s~~~~~~----~~g~~~~~v~~~~~~~~d~~~l~~~i~~ 150 (371)
T PRK13520 75 PDAYGYITSGGTEANIQAVRAARNLAKAEKPNIVVPESAHFSFDKAAD----MLGVELRRAPLDDDYRVDVKAVEDLIDD 150 (371)
T ss_pred CCCCeEEecCcHHHHHHHHHHHHhhccCCCceEEecCcchHHHHHHHH----HcCceEEEecCCCCCcCCHHHHHHHHhh
Confidence 88788889999977766554432 111257899999999999776653 45888887754 34555 777
Q ss_pred CEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccC---CCC-----CCcccceEEEecCccccccCCCCC
Q 001586 297 DVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTI---LKP-----PGELGADIVVGSAQRFGVPMGYGG 367 (1049)
Q Consensus 297 ~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~---l~~-----p~~~GaDivvgs~k~lg~P~~~GG 367 (1049)
++++|++.++ |.+|.+.|+++|+++||++|++++|+. .++.+. ... ...+|+|.+.+++++|+.+ |+
T Consensus 151 ~~~~vi~~~~~~~tG~~~~l~~I~~l~~~~g~~livD~-a~~~~~~~~~~~~~~~~~~~~~vd~~~~s~~K~~~a---~~ 226 (371)
T PRK13520 151 NTIGIVGIAGTTELGQVDPIPELSKIALENGIFLHVDA-AFGGFVIPFLDDPPNFDFSLPGVDSITIDPHKMGLA---PI 226 (371)
T ss_pred CCEEEEEEcCCcCCcccCCHHHHHHHHHHcCCCEEEEe-cchhHHHHhhcCCCCccccCCCCceEEECCccccCc---cC
Confidence 7877777665 689999999999999999999999943 222221 111 1246899999998777532 23
Q ss_pred CceEEEEEchhHHhcCCCceeeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcchHHHHH
Q 001586 368 PHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIA 447 (1049)
Q Consensus 368 P~~G~l~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irrekaTsni~t~~~l~a~~aa~y~~~~g~~Gl~~ia 447 (1049)
|.+++++.++++.+.+... .+ |... .. + .-..+|.+. ....++.+++ ..++.+|++++.
T Consensus 227 ~~G~~~~~~~~~~~~l~~~----------~~-~~~~--~~-~--~~~~gt~~~---~~~~~~~~al--~~l~~~g~~~~~ 285 (371)
T PRK13520 227 PAGGILFRDESYLDALAVD----------TP-YLTS--KK-Q--ATLTGTRSG---AGVAATYAVM--KYLGREGYRKVV 285 (371)
T ss_pred CceEEEEcCHHHHHhhccc----------Cc-cccC--CC-C--cceEeeccC---hHHHHHHHHH--hhhcHhHHHHHH
Confidence 4445555566676665310 00 1000 00 0 001244433 2333444443 667888999999
Q ss_pred HHHHHHHHHHHHHhhcCCCeEEcCCCCcceEEEecCCHHHHHHHHHHcCCeeeeec-CCeEEEEeccCCCHHHHHHHHHH
Q 001586 448 QRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVVD-SNTVTASFDETTTLEDVDKLFIV 526 (1049)
Q Consensus 448 ~~~~~~a~~l~~~L~~~g~~~v~~~~~~~~v~i~~~~~~~v~~~L~~~gI~~~~~~-~~~vris~~~~~t~edid~lv~a 526 (1049)
+++.+++++|+++|+++| ++++..+..+.+.+.++.+.++.++|.++||.++... ++.+|+|++.++|++|||+|+++
T Consensus 286 ~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~v~~~~~~~~~v~~~L~~~gi~v~~~~~~~~iRis~~~~~t~edi~~~~~~ 364 (371)
T PRK13520 286 ERCMENTRWLAEELKERG-FEPVIEPVLNIVAFDDPNPDEVREKLRERGWRVSVTRCPEALRIVCMPHVTREHIENFLED 364 (371)
T ss_pred HHHHHHHHHHHHHHHhCC-CEEecCCCceEEEEecCCHHHHHHHHHHCCceeccCCCCCEEEEEEECCCCHHHHHHHHHH
Confidence 999999999999999886 8844333344566666667899999999999887643 46799999999999999999999
Q ss_pred Hh
Q 001586 527 FA 528 (1049)
Q Consensus 527 L~ 528 (1049)
|+
T Consensus 365 l~ 366 (371)
T PRK13520 365 LK 366 (371)
T ss_pred HH
Confidence 96
No 48
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.91 E-value=3.7e-22 Score=231.57 Aligned_cols=301 Identities=15% Similarity=0.162 Sum_probs=221.4
Q ss_pred hhHHHHHHHHHHHHHHHhCCCCc-ceEeccchHHHHHHHHHHhhhccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEE
Q 001586 207 QGRLESLLNFQTMIADLTGLPMS-NASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVV 285 (1049)
Q Consensus 207 qg~le~l~e~q~~ia~L~G~~~~-n~sl~~~~Ta~~eA~~~a~~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~ 285 (1049)
++..+.+.++++.+++++|++.. ++.++.++|.+++.++.++ . ++|++|+++...|+++...++..++..|++++.
T Consensus 40 ~~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~al~~~~~~~-~--~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~ 116 (376)
T TIGR01977 40 LRASREVEETRQLLAKLFNAPSSAHVVFTNNATTALNIALKGL-L--KEGDHVITTPMEHNSVARPLECLKEQIGVEITI 116 (376)
T ss_pred HHHHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHHHHHhc-c--CCCCEEEECcchhhHHHHHHHHHHHHcCcEEEE
Confidence 34457788899999999999754 7888899997777655553 2 378999999999999998887777777999888
Q ss_pred eCc--------chhhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCC-CCCcccceEEEe
Q 001586 286 SDL--------KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVVG 354 (1049)
Q Consensus 286 v~~--------~~l~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~-~p~~~GaDivvg 354 (1049)
++. +++++ +++++++|++++| |++|.+.|+++|+++||++|++++|+ ...++|.+. ...++|+|++++
T Consensus 117 v~~~~~~~~d~~~l~~~~~~~~~~v~~~~~~n~tG~~~~~~~i~~l~~~~~~~livD-~a~~~g~~~~~~~~~~~D~~~~ 195 (376)
T TIGR01977 117 VKCDNEGLISPERIKRAIKTNTKLIVVSHASNVTGTILPIEEIGELAQENGIFFILD-AAQTAGVIPIDMTELAIDMLAF 195 (376)
T ss_pred EecCCCCCcCHHHHHHhcCCCCeEEEEECCCCCccccCCHHHHHHHHHHcCCEEEEE-hhhccCccCCCchhcCCCEEEe
Confidence 764 34555 7788999999987 78999999999999999999999994 344665442 345689999999
Q ss_pred cC-ccccccCCCCCCceEEEEEchhHHhcCCCceeeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHH
Q 001586 355 SA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAM 433 (1049)
Q Consensus 355 s~-k~lg~P~~~GGP~~G~l~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irrekaTsni~t~~~l~a~~aa~ 433 (1049)
++ |++++|. +.|+++++++. .+.....|+.. .+.+.+.. .+...-|++.+|.|+ ..+.++.+++
T Consensus 196 s~~K~l~~p~-----g~g~l~~~~~~--~~~~~~~~~~~----~~~~~~~~-~~~~~~r~~~~t~~~---~~~~a~~~al 260 (376)
T TIGR01977 196 TGHKGLLGPQ-----GTGGLYIREGI--KLKPLKSGGTG----SHSALIDQ-PSELPDRFESGTLNT---PGIAGLNAGI 260 (376)
T ss_pred cccccccCCC-----CceEEEEcCCc--CcCceecCCCc----cccccccc-cccchhhccCCCCCH---HHHHHHHHHH
Confidence 99 5565443 46778888764 12222222110 00111111 111223567788877 4566666665
Q ss_pred HHHHhCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEcCC--C--CcceEEEecCC--HHHHHHHHHHc-CCeeee-----
Q 001586 434 YAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL--P--FFDTVKVKCAD--AHAIASAAYKI-EMNLRV----- 501 (1049)
Q Consensus 434 y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~g~~~v~~~--~--~~~~v~i~~~~--~~~v~~~L~~~-gI~~~~----- 501 (1049)
.++...|++++.+|+.++++++++.|.++++++++.+ + ....+.|..++ ..++.+.|.++ ||.++.
T Consensus 261 --~~~~~~g~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~~gi~v~~g~~~~ 338 (376)
T TIGR01977 261 --KFIEKIGIANIAKKECMLTEKLLNGLREINKVKIYGPADPANRVGVVSFTVEGIDSEEVADILDEKFDIATRTGLHCA 338 (376)
T ss_pred --HHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCccccCCeEEEEECCCCHHHHHHHHhccCCEEEEcccccc
Confidence 6777889999999999999999999998755888743 1 23346666665 67899999987 887643
Q ss_pred ---------ecCCeEEEEeccCCCHHHHHHHHHHHh
Q 001586 502 ---------VDSNTVTASFDETTTLEDVDKLFIVFA 528 (1049)
Q Consensus 502 ---------~~~~~vris~~~~~t~edid~lv~aL~ 528 (1049)
...+.+|+|++.++|.+|||+++++|+
T Consensus 339 ~~~~~~~g~~~~~~iRis~~~~~t~~dv~~~~~~l~ 374 (376)
T TIGR01977 339 PLAHKTIGTFATGTIRLSLGYFNTEEEIEKLLEALS 374 (376)
T ss_pred hHHHHHhCCCCCCeEEEecCCCCCHHHHHHHHHHHh
Confidence 134789999999999999999999986
No 49
>PLN02880 tyrosine decarboxylase
Probab=99.91 E-value=3.3e-22 Score=238.16 Aligned_cols=385 Identities=15% Similarity=0.112 Sum_probs=244.1
Q ss_pred CCCCCHHHHHHHHHHHhccccCcCcccccccccccc---CccccccccccCcccccCCCCCchhhhhcHHHHHHHHHHHH
Q 001586 565 NKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMK---LNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWL 641 (1049)
Q Consensus 565 ~~~~se~e~~~~l~~l~~~d~~~~~~~i~lGs~t~~---~~~~~~~~~~~~~~f~~~~P~~p~e~~~G~~~~i~el~~~l 641 (1049)
+++.+-+++++.+.+.-.......+..-++|+.... .....+++.. .+ +.+-+. .+.+++..+++.++.+|+
T Consensus 57 ~~~~~~~~~l~~~~~~i~~~~~~~~hP~f~~~~~~~~~~~~~lad~l~~---~~-n~~~~~-~~~sp~~~~lE~~vi~wl 131 (490)
T PLN02880 57 NQPETLDQVLDDVQAKILPGVTHWQSPNYFAYYPSNSSVAGFLGEMLSA---GL-NIVGFS-WITSPAATELEMIVLDWL 131 (490)
T ss_pred CCCCCHHHHHHHHHHHHhcCCCCCCCCCeeEeccCCCcHHHHHHHHHHH---hh-ccCCcc-cccCcccHHHHHHHHHHH
Confidence 466788899999887544433222333345542111 0011111111 11 111111 256778889999999999
Q ss_pred HHhhCCCcc--------ccccCchHHHHHHHHHHHHHHHH-hcCCC--CCCEEEEcCCCCCccHHHHHhcCCE---EEEE
Q 001586 642 CTITGFDSF--------SLQPNAGAAGEYAGLMVIRAYHK-ARGDH--HRNVCIIPVSAHGTNPATAAMCGMK---IVSV 707 (1049)
Q Consensus 642 a~l~G~~~~--------~l~~~sGa~ge~a~l~air~y~~-~~G~~--~r~~VLip~saHg~~pa~a~~~G~~---Vv~V 707 (1049)
++++|++.. .+..++|+++++.++.++|.+.. ..|.. ++-.|++++.+|.+..+++.+.|+. ++.|
T Consensus 132 ~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~aH~Sv~Kaa~~lGlg~~~v~~V 211 (490)
T PLN02880 132 AKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQTHSALQKACQIAGIHPENCRLL 211 (490)
T ss_pred HHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCCchHHHHHHHHHcCCCHHHEEEe
Confidence 999999863 23455677788777777775432 22221 2345668999999999999999994 8899
Q ss_pred cCCC--CCCCCHHHHHHHHHhc---CCCeEEEEEEcCCc-cccccccHHHHHHHHHHcCCEEEEeccccccccCcCC---
Q 001586 708 GTDA--KGNINIEELRKAAEAN---RDNLSTLMVTYPST-HGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTS--- 778 (1049)
Q Consensus 708 ~~d~--~g~iD~~~L~~~i~~~---~~~taaV~it~Pn~-~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~--- 778 (1049)
|+|+ ++++|+++|+++|++. +..+.+|+.+..+| +|.++ |+++|+++|+++|+|+|||||+..+. +..
T Consensus 212 p~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiD-pl~eI~~i~~~~~iwlHVDaA~gg~~--~~~~~~ 288 (490)
T PLN02880 212 KTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVD-PLLELGKIAKSNGMWFHVDAAYAGSA--CICPEY 288 (490)
T ss_pred ecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccC-cHHHHHHHHHHcCCEEEEehhhHHHH--HhCHHH
Confidence 9975 5799999999999743 22467788888876 89999 79999999999999999999854221 112
Q ss_pred ----CCccCCcEEEeCCCcccccCCCCCCCceeEEEEccc--ccccCCCC--cccc-CCCC-CCCC-CCCCCCCCCccch
Q 001586 779 ----PGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH--LAPFLPSH--PVVS-TGGI-PAPE-KSQPLGTIAAAPW 847 (1049)
Q Consensus 779 ----Pg~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~--l~~~lpg~--~vg~-t~~~-~~~~-~~~~t~~i~sa~~ 847 (1049)
.|-.++|.++.|+|||++.|+++ |++++++. +...+... .... ..+. .... .... + +.
T Consensus 289 ~~~l~gie~aDSit~d~HKwl~~P~~~-----g~llvr~~~~l~~~~~~~~~Yl~~~~~~~~~~~~~~~~~---i---~~ 357 (490)
T PLN02880 289 RHYIDGVEEADSFNMNAHKWFLTNFDC-----SLLWVKDRNALIQSLSTNPEFLKNKASQANSVVDYKDWQ---I---PL 357 (490)
T ss_pred HHHhcCchhcCEEEECchhhcCCCccE-----EEEEEeCHHHHHHHHccCHHHhcCccccccCCCChhccC---c---CC
Confidence 24457999999999999887665 58888852 21111100 0000 0000 0000 0011 1 11
Q ss_pred hhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc--CCeeeccCCCceeeEEEEeccCccccCCCCH----H
Q 001586 848 GSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEFIVDLRGLKNTAGIEP----E 921 (1049)
Q Consensus 848 g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~--~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~----~ 921 (1049)
|....++..|+.++.+|.+|+++..++.+++|+|+.+.|++. ++++. + +..+.++|.+++.... .... .
T Consensus 358 ~rr~~alklw~~l~~~G~~g~~~~i~~~~~lA~~~~~~l~~~~~~el~~--~--~~~~iv~Fr~~~~~~~-~~~~~~~n~ 432 (490)
T PLN02880 358 GRRFRSLKLWMVLRLYGVENLQSYIRNHIKLAKEFEQLVAQDSRFEVVT--P--RIFSLVCFRLVPPKNN-EDNGNKLNH 432 (490)
T ss_pred CCcccHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEec--C--CceEEEEEEEeCCCCC-hhhHHHHHH
Confidence 122334578999999999999999999999999999999875 55542 1 3344566665431100 0011 2
Q ss_pred HHHHHHHHCCcc-cCCCCCCCCCEEEEEccCC-CCHHHHHHHHHHHHHHHHHHH
Q 001586 922 DVAKRLMDYGFH-GPTMSWPVPGTLMIEPTES-ESKEELDRYCDALISIREEIA 973 (1049)
Q Consensus 922 ~v~k~L~~~Gi~-~~~~~~p~~~~lri~~t~~-~t~eeid~fv~aL~~i~~~i~ 973 (1049)
++.++|.+.|.. +....+.-...+|+++.-. ++++|+|++++.|.++.+++.
T Consensus 433 ~l~~~l~~~g~~~v~~t~~~g~~~lR~~~~n~~tt~~di~~~~~~i~~~~~~~~ 486 (490)
T PLN02880 433 DLLDAVNSSGKIFISHTVLSGKYVLRFAVGAPLTEERHVTAAWKVLQDEASKLL 486 (490)
T ss_pred HHHHHHHhCCCEEEEEEEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 455666655543 3322222246799998754 556999999999998877653
No 50
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.90 E-value=1.5e-21 Score=229.03 Aligned_cols=311 Identities=17% Similarity=0.169 Sum_probs=212.5
Q ss_pred HHHHHHHHHHHHHHhhCC-Cccc-cccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccH----HHHHhcCCE
Q 001586 630 YQEMFNNLGEWLCTITGF-DSFS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNP----ATAAMCGMK 703 (1049)
Q Consensus 630 ~~~~i~el~~~la~l~G~-~~~~-l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~p----a~a~~~G~~ 703 (1049)
..+.+.++++.+++++|. +... +..+++++|...+ ++.+... ...++++||++...|.++. ..++..|++
T Consensus 65 ~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~~l~~~---~~~~~~~-~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~ 140 (406)
T PRK09295 65 ATEKMENVRKQAALFINARSAEELVFVRGTTEGINLV---ANSWGNS-NVRAGDNIIISEMEHHANIVPWQMLCARVGAE 140 (406)
T ss_pred HHHHHHHHHHHHHHHcCcCCCCeEEEeCCHHHHHHHH---HHHhhhh-cCCCcCEEEECcchhhHHHHHHHHHHHHcCcE
Confidence 456788899999999997 4333 3444445554333 3322110 1125688999988776542 235678999
Q ss_pred EEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-ccccccccHHHHHHHHHHcCCEEEEeccccccccCcCCCCcc
Q 001586 704 IVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI 782 (1049)
Q Consensus 704 Vv~V~~d~~g~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~Pg~~ 782 (1049)
++.++.+++|.+|+++|+++++ ++|++|++++|+ .+|.+. |+++|+++||++|++++||+++..+...+ ...++
T Consensus 141 v~~v~~~~~~~~d~~~l~~~i~---~~t~lv~l~~~~n~tG~~~-~~~~i~~~~~~~~~~vivD~a~~~g~~~~-~~~~~ 215 (406)
T PRK09295 141 LRVIPLNPDGTLQLETLPALFD---ERTRLLAITHVSNVLGTEN-PLAEMIALAHQHGAKVLVDGAQAVMHHPV-DVQAL 215 (406)
T ss_pred EEEEecCCCCCCCHHHHHHhcC---CCcEEEEEecchhcccccC-CHHHHHHHHHHcCCEEEEEcccccCcccc-Cchhc
Confidence 9999998889999999999997 789999999995 699998 79999999999999999999875433222 22467
Q ss_pred CCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCC----C---CC-----CCCCCCCCCCCCccchhhH
Q 001586 783 GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTG----G---IP-----APEKSQPLGTIAAAPWGSA 850 (1049)
Q Consensus 783 GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~----~---~~-----~~~~~~~t~~i~sa~~g~~ 850 (1049)
++|++++|+||.+ |.+|+|++++++++.+.++....|... + .. ..+.+.+|.++
T Consensus 216 ~~D~~~~s~~K~~------gp~G~G~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~e~GT~~~-------- 281 (406)
T PRK09295 216 DCDFYVFSGHKLY------GPTGIGILYVKEALLQEMPPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNT-------- 281 (406)
T ss_pred CCCEEEeehhhcc------CCCCcEEEEEchHhHhhCCCcccCCceeeeeecCCccccCCchhhcCCCCccH--------
Confidence 8999999999955 345789999998877766643333211 0 00 00112222221
Q ss_pred HHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHHHC
Q 001586 851 LILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDY 930 (1049)
Q Consensus 851 ~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~ 930 (1049)
.......+.+..+...|+..+.++...+++++.++|+++..+...++. .....+.|.++ +.+..++.+.|.++
T Consensus 282 ~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~~-~~~~iv~~~~~------~~~~~~~~~~L~~~ 354 (406)
T PRK09295 282 GGIIGLGAALDYVSALGLNNIAEYEQNLMHYALSQLESVPDLTLYGPQ-NRLGVIAFNLG------KHHAYDVGSFLDNY 354 (406)
T ss_pred HHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCC-CCceEEEEEEC------CcCHHHHHHHHHhC
Confidence 122334455566655677777778888999999999875222211221 12233445543 35678899999999
Q ss_pred CcccCCCC---------CCCCCEEEEEccCCCCHHHHHHHHHHHHHHHH
Q 001586 931 GFHGPTMS---------WPVPGTLMIEPTESESKEELDRYCDALISIRE 970 (1049)
Q Consensus 931 Gi~~~~~~---------~p~~~~lri~~t~~~t~eeid~fv~aL~~i~~ 970 (1049)
||.+..-. +..++.+|+|++.++|++|||+|+++|+++..
T Consensus 355 gI~v~~g~~c~~~~~~~~~~~~~iRiS~~~ynt~~did~l~~~l~~i~~ 403 (406)
T PRK09295 355 GIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVDRLVAGLQRIHR 403 (406)
T ss_pred CeEEeccccchHHHHHHHCCCCEEEEEccCCCCHHHHHHHHHHHHHHHH
Confidence 99875311 11347899999999999999999999998743
No 51
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.90 E-value=1.2e-21 Score=246.95 Aligned_cols=343 Identities=14% Similarity=0.130 Sum_probs=233.4
Q ss_pred CCccccccCCCCCCCCCcHHHHHHHHhCCcccccc--CCChh-hHhhhHHHHHHHHHHHHHHHhCCCCc--ceEeccchH
Q 001586 164 NKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQY--TPYQA-EIAQGRLESLLNFQTMIADLTGLPMS--NASLLDEGT 238 (1049)
Q Consensus 164 n~~~~~~lG~g~y~~~~p~~i~~~~~~~~~~~t~y--tpyq~-e~sqg~le~l~e~q~~ia~L~G~~~~--n~sl~~~~T 238 (1049)
+..|.++-|.+.+ -|.++.+.+.. |+..+ +|... ..++-..+.+.++++.+++++|++.. .+.++.++|
T Consensus 34 ~~iYLD~Aatt~~---~~~~V~~~~~~---~~~~~~~np~s~~~~s~~~~~~~e~aR~~ia~~lga~~~~~~VvFtsnaT 107 (805)
T PLN02724 34 GVVYLDHAGATLY---SESQLEAALAD---FSSNVYGNPHSQSDSSMRSSDTIESARQQVLEYFNAPPSDYACVFTSGAT 107 (805)
T ss_pred CCEeEeCCCCCCC---CHHHHHHHHHH---HHhhccCCCCcCcchhhhHHHHHHHHHHHHHHHhCCCccceEEEEeCChH
Confidence 3567777777754 34455432211 22211 33321 24566778899999999999999765 468888999
Q ss_pred HHHHHHHHHhhhccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCcc------------------hhhc-c-----
Q 001586 239 AAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK------------------DIDY-K----- 294 (1049)
Q Consensus 239 a~~eA~~~a~~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~~~------------------~l~~-l----- 294 (1049)
.++..+..++.+ ++|++||++..+|++++. |+.+++..|+++++++++ +++. +
T Consensus 108 ~alnlva~~l~~--~~gd~Iv~t~~eH~svl~-~~~~a~~~G~~v~~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l~ 184 (805)
T PLN02724 108 AALKLVGETFPW--SSESHFCYTLENHNSVLG-IREYALEKGAAAIAVDIEEAANQPTNSQGSVVVKSRGLQRRNTSKLQ 184 (805)
T ss_pred HHHHHHHHHCCC--CCCCeEEEeeccccchHH-HHHHHHHcCCeEEeccchhccccccccccccccchhhhhhhhhhhhc
Confidence 666654444433 378999999999999885 446667789999988753 1211 1
Q ss_pred -----CCCEeEEEEEc-CCCCeeeccHHHHHHHHHhC-------C-cEEEE-EeccccccCC-CCCCcccceEEEecCcc
Q 001586 295 -----SGDVCGVLVQY-PGTEGEVLDYGDFIKNAHAN-------G-VKVVM-ATDLLALTIL-KPPGELGADIVVGSAQR 358 (1049)
Q Consensus 295 -----~~~t~~V~v~~-pn~~G~i~di~~I~~~ah~~-------g-alliV-~a~~~alg~l-~~p~~~GaDivvgs~k~ 358 (1049)
+++|++|++++ +|.+|.+.|++.|.++++.. | ++++| +++ ++|.+ .+..++|+|++++|++|
T Consensus 185 ~~~~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v~vDaaQ--~~g~~piDv~~~~~Dfl~~S~HK 262 (805)
T PLN02724 185 KREDDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRWMVLLDAAK--GCGTSPPDLSRYPADFVVVSFYK 262 (805)
T ss_pred cccccCCCcceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcceEEEeehhh--hcCCCCCChhhcCCCEEEEecce
Confidence 24567888887 69999999999775555432 3 56778 445 44433 24578999999999954
Q ss_pred c-cccCCCCCCceEEEEEchhHHhcCCCceeee-eecC-CCCcceeeecccccccccccccCCCccchhHHHHHHHHHHH
Q 001586 359 F-GVPMGYGGPHAAFLATSQEYKRMMPGRIVGV-SIDS-SGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYA 435 (1049)
Q Consensus 359 l-g~P~~~GGP~~G~l~~~~~l~~~lpgrivG~-s~d~-~g~~~~~l~lqtreq~irrekaTsni~t~~~l~a~~aa~y~ 435 (1049)
| |+|. |.|+|++++++.+.+++.++|+ +.+. .....|.. ...+.+.|+|.||.|+ .++.++.+|+
T Consensus 263 ~~GgP~-----G~G~L~vr~~~~~~l~p~~~GGg~~~~~~~~~~~~~--~~~~~~~rfE~GT~n~---~~i~~l~aal-- 330 (805)
T PLN02724 263 IFGYPT-----GLGALLVRRDAAKLLKKKYFGGGTVAASIADIDFVK--RRERVEQRFEDGTISF---LSIAALRHGF-- 330 (805)
T ss_pred eccCCC-----CceEEEEehhhhhhhcCCccCCCceEEEecccceee--ccccHHHHhcCCCcch---hHHHHHHHHH--
Confidence 4 3343 4789999999888888877774 2210 00001111 1112356789999999 5677777776
Q ss_pred HHhCcchHHHHHHHHHHHHHHHHHHhhcCC------CeEEcCCC--------CcceEEEecCC-------HHHHHHHHHH
Q 001586 436 VYHGPEGLKTIAQRVHGLAGTFALGLKKLG------TVEVQGLP--------FFDTVKVKCAD-------AHAIASAAYK 494 (1049)
Q Consensus 436 ~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~g------~~~v~~~~--------~~~~v~i~~~~-------~~~v~~~L~~ 494 (1049)
.++...|+++|.+++..++++|.++|+++. ++++++.. ...+|+|++.+ ..++...+.+
T Consensus 331 ~~l~~ig~~~I~~~~~~L~~~l~~~L~~l~~~~g~~~v~iyg~~~~~~~~~~r~~ivsFnv~~~~~~~v~~~~v~~l~~~ 410 (805)
T PLN02724 331 KLLNRLTISAIAMHTWALTHYVANSLRNLKHGNGAPVCVLYGNHTFKLEFHIQGPIVTFNLKRADGSWVGHREVEKLASL 410 (805)
T ss_pred HHHHHhChHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCCCCCcccccCEEEEEEEcCCCCEeCHHHHHHHHHh
Confidence 555566899999999999999999999873 37887532 23467776543 3445555566
Q ss_pred cCCeeee------------e---------------------------cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001586 495 IEMNLRV------------V---------------------------DSNTVTASFDETTTLEDVDKLFIVFAG 529 (1049)
Q Consensus 495 ~gI~~~~------------~---------------------------~~~~vris~~~~~t~edid~lv~aL~~ 529 (1049)
+||.++. + ..+.||+|++.+||.+|||+|+++|+.
T Consensus 411 ~gI~vR~G~~Ca~~~~~~~lg~~~~~l~~~~~~~~~c~~~~~~~~~~~~G~vRvS~g~ynt~eDvd~lv~~l~~ 484 (805)
T PLN02724 411 SGIQLRTGCFCNPGACAKYLGLSHKDLQANFEAGHVCWDDQDVIHGRPTGAVRVSFGYMSTFEDCQKFIDFIIS 484 (805)
T ss_pred cCcEEeeccccCchHHHHHcCCCHHHHHHHhhcCCccCchhheecCcccceEEEEcCccCCHHHHHHHHHHHHH
Confidence 7997631 0 127899999999999999999999974
No 52
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.90 E-value=2.3e-22 Score=230.42 Aligned_cols=294 Identities=18% Similarity=0.231 Sum_probs=209.3
Q ss_pred hhhhcHHHHHHHHHHHHHHhhCCC-c--cccccCchHHHHHHHHHHHHHHHHh----c--CCCCCCEEEEcCCCCCccHH
Q 001586 625 DQAQGYQEMFNNLGEWLCTITGFD-S--FSLQPNAGAAGEYAGLMVIRAYHKA----R--GDHHRNVCIIPVSAHGTNPA 695 (1049)
Q Consensus 625 e~~~G~~~~i~el~~~la~l~G~~-~--~~l~~~sGa~ge~a~l~air~y~~~----~--G~~~r~~VLip~saHg~~pa 695 (1049)
+.+++..++++++.+++++++|.+ . ..++.++|++|+..++.+++..... . +..++.+|+++..+|.++..
T Consensus 31 ~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~h~~~~~ 110 (345)
T cd06450 31 DESPAATEMEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRARKRLKAGGGRGIDKLVIVCSDQAHVSVEK 110 (345)
T ss_pred ccCchhHHHHHHHHHHHHHHhCCCCCCCCEEEeCChhHHHHHHHHHHHHHhhhhhhcccccccCCeEEEEcCcchhHHHH
Confidence 446678888999999999999986 2 2456677777776666555432110 0 01124578889989988888
Q ss_pred HHHhcCCEEEEEcCCCCCCCCHHHHHHHHHhc---CCCeEEEEEEcCC-ccccccccHHHHHHHHHHcCCEEEEeccccc
Q 001586 696 TAAMCGMKIVSVGTDAKGNINIEELRKAAEAN---RDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMN 771 (1049)
Q Consensus 696 ~a~~~G~~Vv~V~~d~~g~iD~~~L~~~i~~~---~~~taaV~it~Pn-~~G~i~~di~eI~~lah~~G~ll~vD~A~~~ 771 (1049)
.+...|.+++.+++++++.+|+++|+++++++ ..++++|++++|+ .+|.++ |+++|+++|+++|+++|+|+|+..
T Consensus 111 ~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~-~~~~i~~~~~~~~~~l~vD~a~~~ 189 (345)
T cd06450 111 AAAYLDVKVRLVPVDEDGRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAID-PLEEIADLAEKYDLWLHVDAAYGG 189 (345)
T ss_pred HHHHHhcCeEEeeeCCCCCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCC-CHHHHHHHHHHhCCeEEEechhhH
Confidence 88888999999999888999999999999741 1278888889986 499998 799999999999999999998653
Q ss_pred cccCcCCC-----CccCCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccc
Q 001586 772 AQVGLTSP-----GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAP 846 (1049)
Q Consensus 772 a~~gl~~P-----g~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~ 846 (1049)
....+..+ +..++|++++++||+++.| +|+|+++++
T Consensus 190 ~~~~~~~~~~~~~~~~~~d~~~~s~~K~l~~p-----~g~g~~~~~---------------------------------- 230 (345)
T cd06450 190 FLLPFPEPRHLDFGIERVDSISVDPHKYGLVP-----LGCSAVLVR---------------------------------- 230 (345)
T ss_pred HHhhChhhHHHhcCccccCEEEEchhHhhCCC-----cchHHHHHH----------------------------------
Confidence 33222111 1137899999999998533 344544322
Q ss_pred hhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHH
Q 001586 847 WGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKR 926 (1049)
Q Consensus 847 ~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~ 926 (1049)
+...|+.+..++.+|+.+..++..++++++.+.|+++..+...++ +..+.+.|.+++- ...+++..++.++
T Consensus 231 ------~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~--~~~~iv~f~~~~~-~~~~~~~~~i~~~ 301 (345)
T cd06450 231 ------ALKLWATLRRFGRDGYGEHIDRIVDLAKYLAELIRADPGFELLGE--PNLSLVCFRLKPS-VKLDELNYDLSDR 301 (345)
T ss_pred ------HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC--CceeEEEEEECCc-chhhHHHHHHHHH
Confidence 233577788889999999999999999999999987632211121 1233344554310 0002456789999
Q ss_pred HHHCC-cccCCCCCCCCCEEEEEccCC-CCHHHHHHHHHHHHH
Q 001586 927 LMDYG-FHGPTMSWPVPGTLMIEPTES-ESKEELDRYCDALIS 967 (1049)
Q Consensus 927 L~~~G-i~~~~~~~p~~~~lri~~t~~-~t~eeid~fv~aL~~ 967 (1049)
|.++| +.++...++..+++|++++.. +|++|+|+|+++|++
T Consensus 302 L~~~g~~~~~~~~~~~~~~lRis~~~~~~t~~di~~l~~~l~~ 344 (345)
T cd06450 302 LNERGGWHVPATTLGGPNVLRFVVTNPLTTRDDADALLEDIER 344 (345)
T ss_pred HHhcCCEEEEeeEECCeEEEEEEecCCCCCHHHHHHHHHHHHh
Confidence 99985 455433333357899999976 599999999999875
No 53
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.90 E-value=3.1e-21 Score=226.14 Aligned_cols=312 Identities=17% Similarity=0.167 Sum_probs=212.0
Q ss_pred HHHHHHHHHHHHHhhCCC-cc-ccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccH----HHHHhcCCEE
Q 001586 631 QEMFNNLGEWLCTITGFD-SF-SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNP----ATAAMCGMKI 704 (1049)
Q Consensus 631 ~~~i~el~~~la~l~G~~-~~-~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~p----a~a~~~G~~V 704 (1049)
.+.+.++++.+++++|.+ .. .+..+++++|...++.++. .. ...++++||++...|.++. ..++..|+++
T Consensus 61 ~~~~~~~r~~ia~~~~~~~~~~v~~~~g~t~~l~~~~~~~~---~~-~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~~ 136 (403)
T TIGR01979 61 TEAYEAVREKVAKFINAASDEEIVFTRGTTESINLVAYSWG---DS-NLKAGDEIVISEMEHHANIVPWQLLAERTGATL 136 (403)
T ss_pred HHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHHHHHHhh---hh-cCCCCCEEEECcchhhHHHHHHHHHHHhcCcEE
Confidence 345778999999999987 32 3444455555433333221 10 1125688999988887643 2355789999
Q ss_pred EEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-ccccccccHHHHHHHHHHcCCEEEEeccccccccCcCCCCccC
Q 001586 705 VSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIG 783 (1049)
Q Consensus 705 v~V~~d~~g~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~Pg~~G 783 (1049)
+.++++++|.+|+++|+++++ +++++|++++|+ .+|.+. |+++|+++||++|+++++|+++..+...+ ...+++
T Consensus 137 ~~v~~~~~~~~~~~~l~~~i~---~~~~lv~~~~~~~~tG~~~-~~~~i~~~~~~~~~~~ivD~a~~~g~~~~-~~~~~~ 211 (403)
T TIGR01979 137 KFIPLDDDGTLDLDDLEKLLT---EKTKLVAITHVSNVLGTVN-PVEEIAKLAHQVGAKVLVDGAQAVPHMPV-DVQALD 211 (403)
T ss_pred EEEecCCCCCCCHHHHHHHhc---cCCeEEEEEcccccccccC-CHHHHHHHHHHcCCEEEEEchhhcCcccc-CccccC
Confidence 999999889999999999997 789999999985 599998 79999999999999999999875332221 224578
Q ss_pred CcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCC-CC--C---CC-----CCCCCCCCCCccchhhHHH
Q 001586 784 ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTG-GI--P---AP-----EKSQPLGTIAAAPWGSALI 852 (1049)
Q Consensus 784 aDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~-~~--~---~~-----~~~~~t~~i~sa~~g~~~~ 852 (1049)
+|++++++||+| |.+|+|++++++++.+.++....|... +. . .+ ..+.++. +...
T Consensus 212 ~d~~~~s~~K~~------gp~G~g~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~--------~~~~ 277 (403)
T TIGR01979 212 CDFYVFSGHKMY------GPTGIGVLYGKEELLEQMPPFLGGGEMIAEVSFEETTYNEAPHKFEAGTP--------NIAG 277 (403)
T ss_pred CCEEEEeccccc------CCCCceEEEEchHHHhcCCCeecCCCceeecccCccccCCChhhcCCCCc--------cHHH
Confidence 999999999976 345789999998776666432222110 00 0 00 0011111 1122
Q ss_pred HHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc--CCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHHHC
Q 001586 853 LPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDY 930 (1049)
Q Consensus 853 ~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~--~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~ 930 (1049)
+.+.++.++.+...|+.+..++...+++++.++|+++ +++..+.......+.+.|.++ +.+..++.+.|.++
T Consensus 278 ~~al~~al~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~g~~~~~~~~~~~~~~~v~~~~~------~~~~~~~~~~L~~~ 351 (403)
T TIGR01979 278 VIGLGAAIDYLEAIGLENIEAHEHELTAYALERLGEIPGLRIYGPRDAEDRGGIISFNVE------GVHPHDVGTILDEE 351 (403)
T ss_pred HHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCccccCceEEEEeC------CcCHHHHHHHHhhC
Confidence 2334555666656677777888889999999999875 333211110111223445543 35677899999999
Q ss_pred CcccCCCC---------CCCCCEEEEEccCCCCHHHHHHHHHHHHHHHHH
Q 001586 931 GFHGPTMS---------WPVPGTLMIEPTESESKEELDRYCDALISIREE 971 (1049)
Q Consensus 931 Gi~~~~~~---------~p~~~~lri~~t~~~t~eeid~fv~aL~~i~~~ 971 (1049)
||.+.... +..++++||+++.++|++|+|+|+++|+++++.
T Consensus 352 gI~v~~g~~~~~~~~~~~~~~~~iRiS~~~~~t~~di~~l~~~l~~~~~~ 401 (403)
T TIGR01979 352 GIAVRSGHHCAQPLMRRFGVPATCRASFYIYNTEEDIDALVEALKKVRKF 401 (403)
T ss_pred CEEEcchhhhhHHHHHHhCCCCEEEEEeccCCCHHHHHHHHHHHHHHHHH
Confidence 99875311 123578999999999999999999999988765
No 54
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=99.90 E-value=2.6e-22 Score=231.53 Aligned_cols=315 Identities=20% Similarity=0.244 Sum_probs=202.2
Q ss_pred CCcccCCCCCHHHHHHHHHHHhccccCcCccccccccccccCccccccccccCcccccCCCCCchhhhhcHHHHHHHHHH
Q 001586 560 THPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGE 639 (1049)
Q Consensus 560 ~~p~~~~~~se~e~~~~l~~l~~~d~~~~~~~i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~~G~~~~i~el~~ 639 (1049)
.+| .++.+.+++++.+.+.........++..++|..+...+ .....--....+.+-+.+.. +.++...+++.++.+
T Consensus 11 ~lp--~~~~~~~~vl~~~~~~l~~~~~~~~~P~~~~~~~~~~~-~~~i~~~~l~~~~n~n~~~~-~~~P~~~~~E~~vi~ 86 (373)
T PF00282_consen 11 ELP--EEGESLEEVLKDLREILAPGVTHWHHPRFFGFVPGGPS-PASILADLLASALNQNGFTW-EASPAATEIEREVIR 86 (373)
T ss_dssp CHH--SSHH-HHHHHHHHHHHTHGCS-TTTSTTBESSSHT--C-HHHHHHHHHHHHHT-BTTST-TTSHHHHHHHHHHHH
T ss_pred ccc--cCCCCHHHHHHHHHHHhhccCCCCCChhHhhhccCCcc-HHHHHHHHHHhhhccccccc-ccccccccchHHHHH
Confidence 455 56778999999998876555443333344554221111 11111000011223333343 667788899999999
Q ss_pred HHHHhhCCCc--------cccccCchHHHHHHHHHHHHHHHH----hcCC--CCCCEEEEcCCCCCccHHHHHhcCCEEE
Q 001586 640 WLCTITGFDS--------FSLQPNAGAAGEYAGLMVIRAYHK----ARGD--HHRNVCIIPVSAHGTNPATAAMCGMKIV 705 (1049)
Q Consensus 640 ~la~l~G~~~--------~~l~~~sGa~ge~a~l~air~y~~----~~G~--~~r~~VLip~saHg~~pa~a~~~G~~Vv 705 (1049)
|+++++|++. ..+..++|+.+++.+++++|.+.. ..|. .++..|+++..+|-+..+++.++|+.++
T Consensus 87 ~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~aH~S~~Kaa~~lGlg~~ 166 (373)
T PF00282_consen 87 WLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQAHYSIEKAARILGLGVR 166 (373)
T ss_dssp HHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS-THHHHHHHHTTSEEE
T ss_pred HHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhcccccccccccccccccccHHHHhcceeeeEEE
Confidence 9999999993 234567788888777777775432 2232 1345678899999999999999999999
Q ss_pred EEcCCCCCCCCHHHHHHHHHhcCCC---eEEEEEEcCCc-cccccccHHHHHHHHHHcCCEEEEeccccccccCcCCC--
Q 001586 706 SVGTDAKGNINIEELRKAAEANRDN---LSTLMVTYPST-HGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSP-- 779 (1049)
Q Consensus 706 ~V~~d~~g~iD~~~L~~~i~~~~~~---taaV~it~Pn~-~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~P-- 779 (1049)
.||+|++|++|+++|+++|++...+ +.+|+.+..++ +|.+| |+++|+++|+++++|+|||+|...+. +..|
T Consensus 167 ~I~~~~~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D-~l~~i~~i~~~~~~wlHVDaA~gg~~--~~~~~~ 243 (373)
T PF00282_consen 167 KIPTDEDGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAID-PLEEIADICEKYNIWLHVDAAYGGSA--LLSPEY 243 (373)
T ss_dssp EE-BBTTSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB--SHHHHHHHHHHCT-EEEEEETTGGGG--GGHCTT
T ss_pred EecCCcchhhhHHHhhhhhcccccccccceeeeccCCCccccccc-CHHHHhhhccccceeeeecccccccc--cccccc
Confidence 9999999999999999999764323 44777788875 99999 89999999999999999999743211 2223
Q ss_pred -----CccCCcEEEeCCCcccccCCCCCCCceeEEEEccc--ccccC--CCCccccCCCCCCCCCCCCCCCCCccchhhH
Q 001586 780 -----GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH--LAPFL--PSHPVVSTGGIPAPEKSQPLGTIAAAPWGSA 850 (1049)
Q Consensus 780 -----g~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~--l~~~l--pg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~ 850 (1049)
|-..+|.++.|+||++..|+++ |++.++++ +...+ .....+...............++.. +-.
T Consensus 244 ~~~~~gi~~adSit~d~HK~l~~P~~~-----~~~l~r~~~~l~~~~~~~~~Yl~~~~~~~~~~~~~~~~tl~~---SR~ 315 (373)
T PF00282_consen 244 RHLLFGIERADSITIDPHKWLGVPYGC-----GVLLVRDKSDLRDAFSINADYLGNDDRESDESYDYGDYTLQG---SRR 315 (373)
T ss_dssp GGGGTTGGGESEEEEETTTTTS-SSS------EEEEESSGGGHHGGGEEEETCTT-S-SSS-GGGCEEEGSSSS---SGH
T ss_pred cccccccccccccccchhhhhcCCccc-----eeEEeecccchHHHhccChhhhcccccccccccccccccccc---ccc
Confidence 3347899999999999888765 57888863 22211 0011110000000000000111111 123
Q ss_pred HHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc
Q 001586 851 LILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH 889 (1049)
Q Consensus 851 ~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~ 889 (1049)
..++..|+.|+.+|.+|+++..++.+++|+|++++|++.
T Consensus 316 ~~alk~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~~ 354 (373)
T PF00282_consen 316 FRALKLWATLKSLGREGYRERIRRCIELARYLADRLRKD 354 (373)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred chHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 456778999999999999999999999999999999986
No 55
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.90 E-value=2.3e-21 Score=226.87 Aligned_cols=311 Identities=16% Similarity=0.126 Sum_probs=210.3
Q ss_pred HHHHHHHHHHHHHHhhCCC-ccc-cccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccH----HHHHhcCCE
Q 001586 630 YQEMFNNLGEWLCTITGFD-SFS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNP----ATAAMCGMK 703 (1049)
Q Consensus 630 ~~~~i~el~~~la~l~G~~-~~~-l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~p----a~a~~~G~~ 703 (1049)
..+.+.++++.+++++|.+ ... +..+++++|...++.+ +.. +...++++||++...|.++. ..++..|++
T Consensus 58 ~~~~~~~~r~~la~~~g~~~~~~i~~t~g~t~~l~~~~~~---~~~-~~~~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~~ 133 (398)
T TIGR03392 58 LTARYELARQQVARFLNAPDAENIVWTRGTTESINLVAQS---YAR-PRLQPGDEIIVSEAEHHANLIPWLMVAQQTGAK 133 (398)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCeEEEeCChHHHHHHHHHH---hhh-ccCCCCCEEEECCcchhHHHHHHHHHHHHcCcE
Confidence 3456788999999999985 333 3445555555433333 211 01125689999988876642 235778999
Q ss_pred EEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-ccccccccHHHHHHHHHHcCCEEEEeccccccccCcCCCCcc
Q 001586 704 IVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI 782 (1049)
Q Consensus 704 Vv~V~~d~~g~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~Pg~~ 782 (1049)
++.+++++++.+|+++|+++++ ++|++|++++|+ .+|.+. |+++|+++||++|+++++|+++......+ ...++
T Consensus 134 v~~v~~~~~~~~~~~~l~~~i~---~~t~lv~i~~~~n~tG~~~-~~~~i~~~~~~~~~~~ivD~a~~~~~~~~-~~~~~ 208 (398)
T TIGR03392 134 VVKLPIGADLLPDIRQLPELLT---PRTRILALGQMSNVTGGCP-DLARAITLAHQYGAVVVVDGAQGVVHGPP-DVQAL 208 (398)
T ss_pred EEEEecCCCCCcCHHHHHHHhc---cCceEEEEECccccccccC-CHHHHHHHHHHcCCEEEEEhhhhcCCCCC-Chhhc
Confidence 9999998888999999999997 789999999985 599998 79999999999999999999874322221 12356
Q ss_pred CCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCC----CC--CC-----CCCCCCCCCCCccchhhHH
Q 001586 783 GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTG----GI--PA-----PEKSQPLGTIAAAPWGSAL 851 (1049)
Q Consensus 783 GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~----~~--~~-----~~~~~~t~~i~sa~~g~~~ 851 (1049)
++|++++|+||.| |.+|+|++++++++.+.++....+... +. .. ++.+.+|.++. .
T Consensus 209 ~~d~~~~s~~K~~------gp~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~GT~~~~-----~-- 275 (398)
T TIGR03392 209 DIDFYAFSGHKLY------GPTGIGVLYGKTELLEAMPPWQGGGKMLSHVSFDGFIPQAVPHRFEAGTPNIA-----G-- 275 (398)
T ss_pred CCCEEEEeccccc------CCCceEEEEEcHHHHhhCCCeecCCceEeeccccccccCCChhhccCCCCCHH-----H--
Confidence 8999999999965 334789999998877666532222110 00 00 01122222211 1
Q ss_pred HHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHHHCC
Q 001586 852 ILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYG 931 (1049)
Q Consensus 852 ~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~G 931 (1049)
.....+.+..+...|+.++.++..++++++.+.|+++..+...+.... ..+.+.++ +.+..++.++|.++|
T Consensus 276 -~~a~~~al~~l~~~g~~~i~~~~~~l~~~l~~~l~~l~g~~~~~~~~~--~i~~~~~~------~~~~~~l~~~L~~~g 346 (398)
T TIGR03392 276 -VIGLSAALEWLTDIDIAAAEAWSVSLADLAEERLAQLPGFRSFRCPGS--SLLAFDFA------GVHHSDLAALLAESG 346 (398)
T ss_pred -HHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCC--cEEEEEeC------CcCHHHHHHHHHhCC
Confidence 222334444444557777777788889999999987533221121111 12334443 456789999999999
Q ss_pred cccCCCCC---------CCCCEEEEEccCCCCHHHHHHHHHHHHHHHHH
Q 001586 932 FHGPTMSW---------PVPGTLMIEPTESESKEELDRYCDALISIREE 971 (1049)
Q Consensus 932 i~~~~~~~---------p~~~~lri~~t~~~t~eeid~fv~aL~~i~~~ 971 (1049)
|.+...+. ...+.+|++++.++|++|+|+|+++|+++++.
T Consensus 347 I~v~~g~~~~~~~~~~~g~~~~iRvS~~~~~t~~ei~~l~~~l~~~~~~ 395 (398)
T TIGR03392 347 IALRAGQHCAQPLMAALGVSGTLRASFAPYNTQQDVDALVDAVGAALEL 395 (398)
T ss_pred EEEecCccchHHHHHHhCCCCEEEEEeeccCCHHHHHHHHHHHHHHHHH
Confidence 98753221 12479999999999999999999999988765
No 56
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.90 E-value=3.6e-21 Score=225.56 Aligned_cols=312 Identities=15% Similarity=0.116 Sum_probs=211.8
Q ss_pred cHHHHHHHHHHHHHHhhCC-Cccc-cccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccH----HHHHhcCC
Q 001586 629 GYQEMFNNLGEWLCTITGF-DSFS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNP----ATAAMCGM 702 (1049)
Q Consensus 629 G~~~~i~el~~~la~l~G~-~~~~-l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~p----a~a~~~G~ 702 (1049)
...+.+.++++.+++++|. +... +..+++++|...++ +.+.. ...+++++||++...|.++. ..++..|+
T Consensus 60 ~~~~~~~~~r~~la~~~g~~~~~~i~~~~~~t~~i~~~~---~~~~~-~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~ 135 (401)
T PRK10874 60 RLTARYEAAREQVAQLLNAPDAKNIVWTRGTTESINLVA---QSYAR-PRLQPGDEIIVSEAEHHANLVPWLMVAQQTGA 135 (401)
T ss_pred HHHHHHHHHHHHHHHHcCCCCCCEEEEECCHHHHHHHHH---HHhhh-ccCCCcCEEEECCcchHHHHHHHHHHHHHhCC
Confidence 3456788999999999998 4433 44555666554333 33311 01125689999988776542 23567899
Q ss_pred EEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-ccccccccHHHHHHHHHHcCCEEEEeccccccccCcCCCCc
Q 001586 703 KIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGY 781 (1049)
Q Consensus 703 ~Vv~V~~d~~g~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~Pg~ 781 (1049)
+++.++.+.++.+|+++++++++ ++|++|++++|+ .+|.+. |+++|+++||++|++++||+++..+...+ ...+
T Consensus 136 ~v~~v~~~~~~~~d~~~l~~~i~---~~t~lv~i~~~~n~tG~~~-~~~~i~~l~~~~g~~~ivD~a~~~g~~~~-~~~~ 210 (401)
T PRK10874 136 KVVKLPLGADRLPDVDLLPELIT---PRTRILALGQMSNVTGGCP-DLARAITLAHQAGMVVMVDGAQGAVHFPA-DVQA 210 (401)
T ss_pred EEEEEecCCCCcCCHHHHHHhcC---cCcEEEEEeCCcccccCcC-CHHHHHHHHHHcCCEEEEECCcccccccC-Cchh
Confidence 99999998889999999999997 789999999995 599998 79999999999999999999975333222 2245
Q ss_pred cCCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCC----CC--C-----CCCCCCCCCCCCccchhhH
Q 001586 782 IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTG----GI--P-----APEKSQPLGTIAAAPWGSA 850 (1049)
Q Consensus 782 ~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~----~~--~-----~~~~~~~t~~i~sa~~g~~ 850 (1049)
+++|++++++||.| |.+|+|++++++++.+.++....+... +. . ....+.++.++
T Consensus 211 ~~~d~~~~s~~K~~------gp~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gt~~~-------- 276 (401)
T PRK10874 211 LDIDFYAFSGHKLY------GPTGIGVLYGKSELLEAMSPWQGGGKMLTEVSFDGFTPQSAPWRFEAGTPNV-------- 276 (401)
T ss_pred cCCCEEEEeccccc------CCCccEEEEEchHHHhcCCCeecCCcceEeeccCccCCCCChhhccCCCcCH--------
Confidence 78999999999965 345789999998877666532211110 00 0 00111112221
Q ss_pred HHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHHHC
Q 001586 851 LILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDY 930 (1049)
Q Consensus 851 ~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~ 930 (1049)
....+..+.+..+...|+.+..++...+++++.++|+++..+...++... ..+.++++ +.+..++.+.|.++
T Consensus 277 ~~~~al~~al~~l~~~g~~~~~~~~~~l~~~l~~~l~~~~g~~~~~~~~~--~i~~~~~~------~~~~~~~~~~L~~~ 348 (401)
T PRK10874 277 AGVIGLSAALEWLADIDINQAESWSRSLATLAEDALAKLPGFRSFRCQDS--SLLAFDFA------GVHHSDLVTLLAEY 348 (401)
T ss_pred HHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCC--cEEEEEEC------CcCHHHHHHHHHHC
Confidence 11122333344555566777777777889999999987533321121111 12344543 35678999999999
Q ss_pred CcccCCCCC---------CCCCEEEEEccCCCCHHHHHHHHHHHHHHHHH
Q 001586 931 GFHGPTMSW---------PVPGTLMIEPTESESKEELDRYCDALISIREE 971 (1049)
Q Consensus 931 Gi~~~~~~~---------p~~~~lri~~t~~~t~eeid~fv~aL~~i~~~ 971 (1049)
||.+..... ...+++||++..++|++|||+|+++|+++++.
T Consensus 349 gI~v~~g~~~~~~~~~~~g~~~~iRiS~~~~nt~edid~ll~al~~~~~~ 398 (401)
T PRK10874 349 GIALRAGQHCAQPLLAALGVTGTLRASFAPYNTQSDVDALVNAVDRALEL 398 (401)
T ss_pred CcEEeccccchHHHHHHhCCCCEEEEEecccCCHHHHHHHHHHHHHHHHH
Confidence 998754221 12479999999999999999999999988765
No 57
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.89 E-value=4.7e-21 Score=226.21 Aligned_cols=315 Identities=16% Similarity=0.124 Sum_probs=214.9
Q ss_pred HHHHHHHHHHHHhhCCCc-cc-cccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHH----HHHhcCCEEE
Q 001586 632 EMFNNLGEWLCTITGFDS-FS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA----TAAMCGMKIV 705 (1049)
Q Consensus 632 ~~i~el~~~la~l~G~~~-~~-l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa----~a~~~G~~Vv 705 (1049)
+.+.++++.+++++|.+. .. +..++++++...+ ++.+... ...++++||++...|.++.. .++..|++++
T Consensus 76 ~~~~~~r~~la~~~~~~~~~~v~~t~g~t~al~~i---~~~~~~~-~~~~gd~vl~~~~~~~s~~~~~~~~a~~~g~~v~ 151 (424)
T PLN02855 76 DAYELARKKVAAFINASTSREIVFTRNATEAINLV---AYTWGLA-NLKPGDEVILSVAEHHSNIVPWQLVAQKTGAVLK 151 (424)
T ss_pred HHHHHHHHHHHHHcCCCCCCEEEEeCCHHHHHHHH---HHHhhhh-cCCCcCEEEECCCccHHHHHHHHHHHHHcCCEEE
Confidence 456789999999999853 23 4444555444322 3322100 11256789999888865432 2567899999
Q ss_pred EEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-ccccccccHHHHHHHHHHcCCEEEEeccccccccCcCCCCccCC
Q 001586 706 SVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGA 784 (1049)
Q Consensus 706 ~V~~d~~g~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~Pg~~Ga 784 (1049)
.++++.++.+|++++++.++ ++|++|++++|+ .+|.+. |+++|+++||++|+++++|+++..+...+ ...++++
T Consensus 152 ~v~~~~~~~~~~~~l~~~i~---~~t~lv~i~~~~n~tG~~~-~~~~I~~l~~~~g~~vivD~a~~~g~~~~-~~~~~~~ 226 (424)
T PLN02855 152 FVGLTPDEVLDVEQLKELLS---EKTKLVATHHVSNVLGSIL-PVEDIVHWAHAVGAKVLVDACQSVPHMPV-DVQTLGA 226 (424)
T ss_pred EEecCCCCCcCHHHHHHHhc---cCceEEEEeCccccccccC-CHHHHHHHHHHcCCEEEEEhhhhcCCcCC-CchhcCC
Confidence 99998888899999999997 789999999995 599998 79999999999999999999975443332 2346789
Q ss_pred cEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCC------CC--CC---CCCCCCCCCCCccchhhHHHH
Q 001586 785 DVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTG------GI--PA---PEKSQPLGTIAAAPWGSALIL 853 (1049)
Q Consensus 785 Di~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~------~~--~~---~~~~~~t~~i~sa~~g~~~~~ 853 (1049)
|++++++||.+ |.+|+|++++++++.+.++....|... +. .+ .+.+.+|.+ ....
T Consensus 227 d~~~~s~~K~~------gp~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~GT~~--------~~~~ 292 (424)
T PLN02855 227 DFLVASSHKMC------GPTGIGFLWGKSDLLESMPPFLGGGEMISDVFLDHSTYAPPPSRFEAGTPA--------IGEA 292 (424)
T ss_pred CEEEeeccccc------CCCccEEEEEchhhhhcCCCEecCCCceeeeecCccccCCChhhccCCChH--------HHHH
Confidence 99999999943 445799999998877766543333211 00 00 011111111 1222
Q ss_pred HHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc--CCeeeccC--CCceeeEEEEeccCccccCCCCHHHHHHHHHH
Q 001586 854 PISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPILFRGV--NGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMD 929 (1049)
Q Consensus 854 ~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~--~~v~~~g~--~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~ 929 (1049)
...++.+..+...|+.++.++...++++++++|+++ +++..+.. .....+.+.|.++ +++..++.+.|.+
T Consensus 293 ~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~~r~~~v~~~~~------~~~~~~v~~~L~~ 366 (424)
T PLN02855 293 IGLGAAIDYLSEIGMDRIHEYEVELGTYLYEKLSSVPGVRIYGPKPSEGVGRAALCAFNVE------GIHPTDLSTFLDQ 366 (424)
T ss_pred HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCcccccCcccEEEEEEC------CcCHHHHHHHhcc
Confidence 334455566656688888888889999999999875 33321111 0012223445543 4567899999987
Q ss_pred C-CcccCCCCC---------CCCCEEEEEccCCCCHHHHHHHHHHHHHHHHHHHHh
Q 001586 930 Y-GFHGPTMSW---------PVPGTLMIEPTESESKEELDRYCDALISIREEIAQI 975 (1049)
Q Consensus 930 ~-Gi~~~~~~~---------p~~~~lri~~t~~~t~eeid~fv~aL~~i~~~i~~i 975 (1049)
+ ||.+..-.+ ...+.+|+|++.++|.+|||+|+++|+++++..+++
T Consensus 367 ~~gI~v~~g~~c~~~~~~~~g~~~~iRiS~~~ynt~~di~~l~~~l~~~~~~~~~~ 422 (424)
T PLN02855 367 QHGVAIRSGHHCAQPLHRYLGVNASARASLYFYNTKEEVDAFIHALKDTIAFFSSF 422 (424)
T ss_pred cCCEEEechhhhhHHHHHHhCCCCeEEEEeccCCCHHHHHHHHHHHHHHHHHHHhh
Confidence 6 998753210 124789999999999999999999999998876653
No 58
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.89 E-value=6.1e-21 Score=223.72 Aligned_cols=288 Identities=15% Similarity=0.132 Sum_probs=209.2
Q ss_pred HHHHHHHHHHHHHHhCCCCcceEeccchHHHHHHHHHHhhh-ccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc
Q 001586 210 LESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNI-QKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL 288 (1049)
Q Consensus 210 le~l~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a~~~-~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~~ 288 (1049)
.+.+.++++.+++++|.+..++.++.|+|.+.+.++.++.. ..+++++|+++..+|+++...++.. +..|++++++++
T Consensus 46 ~~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~~l~~l~~~~~~~g~~Vi~~~~~h~s~~~~~~~~-~~~g~~v~~v~~ 124 (402)
T TIGR02006 46 EEAVENARNQVAELIGADSREIVFTSGATESNNLAIKGIAHFYKSKGNHIITSKTEHKAVLDTCRYL-EREGFEVTYLPP 124 (402)
T ss_pred HHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhhcCCCCEEEECCCccHHHHHHHHHH-HhcCCEEEEEcc
Confidence 46788899999999999888899999999887766544421 1237899999999999999988653 456999988765
Q ss_pred c--------hhhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCC-CCCcccceEEEecCc
Q 001586 289 K--------DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVVGSAQ 357 (1049)
Q Consensus 289 ~--------~l~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~-~p~~~GaDivvgs~k 357 (1049)
+ ++++ +++++++|+++++ |.+|.+.|+++|+++||++|++++|+. ..+.|... +..++|+|+++++++
T Consensus 125 ~~~~~~d~~~l~~~l~~~~~lv~v~~~~n~tG~~~~~~~I~~l~~~~g~~livD~-a~a~g~~~~~~~~~~~D~~~~s~~ 203 (402)
T TIGR02006 125 KSNGLIDLEELKAAIRDDTILVSIMHVNNEIGVIQDIAAIGEICRERKVFFHVDA-AQSVGKIPINVNELKVDLMSISGH 203 (402)
T ss_pred CCCCcCCHHHHHHhcCCCCEEEEEECCCcCceecccHHHHHHHHHHcCCEEEEEc-chhcCCcccCccccCCCEEEEehh
Confidence 2 3445 6788999999987 789999999999999999999999942 33555442 456789999999995
Q ss_pred cccccCCCCCCceEEEEEchhHHhcCCCceeeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHH
Q 001586 358 RFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVY 437 (1049)
Q Consensus 358 ~lg~P~~~GGP~~G~l~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irrekaTsni~t~~~l~a~~aa~y~~~ 437 (1049)
|+.+| ++.|+++++++....+.+.+.| |.. .-+.+.+|.|+ ..+.++.+++ .+
T Consensus 204 K~~gp-----~G~G~l~~~~~~~~~~~~~~~g------~~~-----------~~~~~~gt~~~---~~~~al~~al--~~ 256 (402)
T TIGR02006 204 KIYGP-----KGIGALYVRRKPRVRLEALIHG------GGH-----------ERGMRSGTLPT---HQIVGMGEAF--RI 256 (402)
T ss_pred hhcCC-----CceEEEEEccCCCCCCCceecC------CCc-----------cCCccCCCccH---HHHHHHHHHH--HH
Confidence 56434 3688999997665555443333 111 01346788888 4566666665 33
Q ss_pred hCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEcCCC--Cc-c--eEEEecCCHHHHHHHHHHcCCeeee-----------
Q 001586 438 HGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLP--FF-D--TVKVKCADAHAIASAAYKIEMNLRV----------- 501 (1049)
Q Consensus 438 ~g~~Gl~~ia~~~~~~a~~l~~~L~~~g~~~v~~~~--~~-~--~v~i~~~~~~~v~~~L~~~gI~~~~----------- 501 (1049)
+ .++++++.++..+++++++++|+++.++++.++. .. . .|+|......++...| ++|.++.
T Consensus 257 ~-~~~~~~~~~~~~~l~~~l~~~l~~~~~v~~~~~~~~~~p~~~~v~f~~~~~~~~~~~l--~~i~v~~G~~c~~~~~~~ 333 (402)
T TIGR02006 257 A-KEEMAQDTAHVLALRDRLLNGIKSIEEVYLNGDLEHRVPGNLNVSFNYVEGESLIMAL--KDLAVSSGSACTSASLEP 333 (402)
T ss_pred H-HHhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCeEEEEEeCcCHHHHHHhc--CCEEEechhhcCCCCCCc
Confidence 3 2478889999999999999999987558876431 12 2 2444422255666665 3554310
Q ss_pred ------------ecCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001586 502 ------------VDSNTVTASFDETTTLEDVDKLFIVFAG 529 (1049)
Q Consensus 502 ------------~~~~~vris~~~~~t~edid~lv~aL~~ 529 (1049)
...+.||+|++.+||++|||+|+++|..
T Consensus 334 ~~~l~~lg~~~~~~~~~vR~S~~~~~t~edid~l~~~l~~ 373 (402)
T TIGR02006 334 SYVLRALGINDELAHSSIRFTIGRFTTEEEIDYAVKLVKS 373 (402)
T ss_pred cHHHHHcCCChhhcCceEEEEecCCCCHHHHHHHHHHHHH
Confidence 0137899999999999999999999964
No 59
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.89 E-value=4.3e-21 Score=222.43 Aligned_cols=310 Identities=21% Similarity=0.215 Sum_probs=209.6
Q ss_pred HHHHHHHHHHHHHHhhCCC-ccc-cccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccH----HHHHhcCCE
Q 001586 630 YQEMFNNLGEWLCTITGFD-SFS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNP----ATAAMCGMK 703 (1049)
Q Consensus 630 ~~~~i~el~~~la~l~G~~-~~~-l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~p----a~a~~~G~~ 703 (1049)
..+.+.++++.+++++|.+ ... +..++++.|...+ ++..... ..++++||++...|.++. ..++..|++
T Consensus 41 ~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~a~~~~---~~~l~~~--~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~ 115 (373)
T cd06453 41 ATDAYEAAREKVARFINAPSPDEIIFTRNTTEAINLV---AYGLGRA--NKPGDEIVTSVMEHHSNIVPWQQLAERTGAK 115 (373)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCeEEEeCCHHHHHHHH---HHHhhhc--CCCCCEEEECcchhHHHHHHHHHHHhhcCcE
Confidence 4466778999999999987 333 3455555554333 3333221 014678999888776642 234578999
Q ss_pred EEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-ccccccccHHHHHHHHHHcCCEEEEeccccccccCcCCCCcc
Q 001586 704 IVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI 782 (1049)
Q Consensus 704 Vv~V~~d~~g~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~Pg~~ 782 (1049)
++.|+++.++.+|+++|+++++ +++++|++++|+ .+|.+. |+++|.++|+++|+++++|+++..+...+ ...++
T Consensus 116 ~~~v~~~~~~~~d~~~l~~~l~---~~~~~v~~~~~~~~tG~~~-~~~~i~~~~~~~~~~li~D~a~~~~~~~~-~~~~~ 190 (373)
T cd06453 116 LKVVPVDDDGQLDLEALEKLLT---ERTKLVAVTHVSNVLGTIN-PVKEIGEIAHEAGVPVLVDGAQSAGHMPV-DVQDL 190 (373)
T ss_pred EEEeecCCCCCcCHHHHHHHhc---CCceEEEEeCcccccCCcC-CHHHHHHHHHHcCCEEEEEhhhhcCceee-ecccc
Confidence 9999998889999999999997 689999999985 599998 79999999999999999999864222111 22457
Q ss_pred CCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCC-CC-CCCCCCCC-CC-CC-CccchhhHHHHHHHH
Q 001586 783 GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTG-GI-PAPEKSQP-LG-TI-AAAPWGSALILPISY 857 (1049)
Q Consensus 783 GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~-~~-~~~~~~~~-t~-~i-~sa~~g~~~~~~~a~ 857 (1049)
|+|++++++||+|+ +||+|++++++++.+.+.....+... +. ........ .. .. .+++ +...+.+.+
T Consensus 191 ~~d~~~~s~~K~~~------~~g~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~t~--~~~~~~al~ 262 (373)
T cd06453 191 GCDFLAFSGHKMLG------PTGIGVLYGKEELLEEMPPYGGGGEMIEEVSFEETTYADLPHKFEAGTP--NIAGAIGLG 262 (373)
T ss_pred CCCEEEeccccccC------CCCcEEEEEchHHhhcCCCeecCCCccccccccccccCCCccccCCCCC--CHHHHHHHH
Confidence 89999999999984 37889999998766655432211110 00 00000000 00 00 0011 112233456
Q ss_pred HHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc--CCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHHHCCcccC
Q 001586 858 TYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGP 935 (1049)
Q Consensus 858 a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~--~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~ 935 (1049)
+.++.+..+|+.+..++..++++++.+.|+++ +++.. .+ ....+.+.+.++ +.+..++.++|.++||.+.
T Consensus 263 ~al~~l~~~g~~~~~~~~~~~~~~l~~~l~~~~~~~~~~-~~-~~~~~~~~~~~~------~~~~~~i~~~l~~~gi~i~ 334 (373)
T cd06453 263 AAIDYLEKIGMEAIAAHEHELTAYALERLSEIPGVRVYG-DA-EDRAGVVSFNLE------GIHPHDVATILDQYGIAVR 334 (373)
T ss_pred HHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcCCCeEEeC-Cc-cccCCeEEEEEC------CcCHHHHHHHHHHCCEEec
Confidence 66778888888888888889999999999875 33431 11 112233555543 3567899999999999874
Q ss_pred CCC---------CCCCCEEEEEccCCCCHHHHHHHHHHH
Q 001586 936 TMS---------WPVPGTLMIEPTESESKEELDRYCDAL 965 (1049)
Q Consensus 936 ~~~---------~p~~~~lri~~t~~~t~eeid~fv~aL 965 (1049)
... ....+++|++++..+|.+|+|+|+++|
T Consensus 335 ~g~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~~~~~l 373 (373)
T cd06453 335 AGHHCAQPLMRRLGVPGTVRASFGLYNTEEEIDALVEAL 373 (373)
T ss_pred cCccchhHHHHHhCCCCeEEEEecCCCCHHHHHHHHhhC
Confidence 321 112579999999999999999999875
No 60
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.89 E-value=5.5e-21 Score=222.54 Aligned_cols=289 Identities=17% Similarity=0.134 Sum_probs=209.0
Q ss_pred HHHHHHHHHHHHHHHhCC-CCcceEeccchHHHHHHHHHHhhh---ccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEE
Q 001586 209 RLESLLNFQTMIADLTGL-PMSNASLLDEGTAAAEAMAMCNNI---QKGKKKTFIIASNCHPQTIDICITRADGFDIKVV 284 (1049)
Q Consensus 209 ~le~l~e~q~~ia~L~G~-~~~n~sl~~~~Ta~~eA~~~a~~~---~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~ 284 (1049)
..+.+.+....+++.+|. ++.++.++.|+|.++..++.++.+ .+.++++|+++..+||++...+.. ++..|++++
T Consensus 40 ~~~~l~~a~~~~~~~~~~~~~~~i~~t~g~teal~~~~~~~~~~~~~~~~~~~vi~~~~e~ps~~~~~~~-~~~~G~~v~ 118 (382)
T TIGR03403 40 THPAIAEALDKLYKGINARDLDDIIITSCATESNNWVLKGVYFDEILKGGKNHIITTEVEHPAVRATCAF-LESLGVEVT 118 (382)
T ss_pred HHHHHHHHHHHHHHHcCcCCCCeEEEeCCHHHHHHHHHHHHHHhhcccCCCCEEEEcCCccHHHHHHHHH-HHHCCCEEE
Confidence 345567777777878887 577899999998665554443311 112357899999999999998864 456899999
Q ss_pred EeCcc--------hhhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCC-CCCCcccceEEE
Q 001586 285 VSDLK--------DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTIL-KPPGELGADIVV 353 (1049)
Q Consensus 285 ~v~~~--------~l~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l-~~p~~~GaDivv 353 (1049)
.++.+ ++++ +++++++|++++| |++|.+.|+++|.++||++|++++|++ ..+.+.. .+..++|+|+++
T Consensus 119 ~v~~~~~g~~d~~~l~~~i~~~t~lv~~~~~~n~tG~~~~~~~I~~la~~~g~~~ivD~-a~~~g~~~~~~~~~~~D~~~ 197 (382)
T TIGR03403 119 YLPINEQGTITAEQVREAITEKTALVSVMWANNETGMIFPIKEIGEICKERGVLFHTDA-VQAIGKIPVDVQKAGVDFLS 197 (382)
T ss_pred EEecCCCCCCCHHHHHHhcccCCeEEEEEcccCCCccccCHHHHHHHHHHcCCEEEEec-hhhcCCCccCccccCCCEEE
Confidence 88753 3444 6788999999887 799999999999999999999999943 2345433 345679999999
Q ss_pred ecCccccccCCCCCCceEEEEEchhHHhcCCCceeeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHH
Q 001586 354 GSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAM 433 (1049)
Q Consensus 354 gs~k~lg~P~~~GGP~~G~l~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irrekaTsni~t~~~l~a~~aa~ 433 (1049)
.|++||.+| ||.|++++++++ .+.+.+.|. .. .-+++.+|.|+ .+++++.+++
T Consensus 198 ~s~~K~~gp-----~G~g~l~vr~~~--~~~p~~~g~------~~-----------~~~~~~gt~~~---~~~~al~~al 250 (382)
T TIGR03403 198 FSAHKFHGP-----KGVGGLYIRKGV--ELTPLFHGG------EH-----------MGGRRSGTLNV---PYIVAMGEAM 250 (382)
T ss_pred EcchhhCCC-----CceEEEEECCCC--CCCCcccCC------CC-----------CCCcccCCcCh---HHHHHHHHHH
Confidence 999556433 568899999765 233333331 10 01234588887 4565666665
Q ss_pred HHHHhCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEcCCC--C-cceEEEecCC--HHHHHHHHHHcCCeeee-------
Q 001586 434 YAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLP--F-FDTVKVKCAD--AHAIASAAYKIEMNLRV------- 501 (1049)
Q Consensus 434 y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~g~~~v~~~~--~-~~~v~i~~~~--~~~v~~~L~~~gI~~~~------- 501 (1049)
.++ .++++.+.+++..+.++|.++|+++++++++++. . .+.+.|.+++ +.++.+.|.++||.++.
T Consensus 251 --~~~-~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~v~~g~~c~~~ 327 (382)
T TIGR03403 251 --RLA-NEYLDFEKSHVRRLRDRLEDALLELPDVFVVGDREHRVPNTILISIKGVEGEAMLWDLNKAGIAASTGSACASE 327 (382)
T ss_pred --HHH-HHhHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCCcCCEEEEEeCCCCHHHHHHhhccCCEEEEchhccCCC
Confidence 222 3357888899999999999999988559887532 2 2344555554 77888889999998862
Q ss_pred ----------e------cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001586 502 ----------V------DSNTVTASFDETTTLEDVDKLFIVFAG 529 (1049)
Q Consensus 502 ----------~------~~~~vris~~~~~t~edid~lv~aL~~ 529 (1049)
+ ..+.||+|++.+||++|||+|+++|+.
T Consensus 328 ~~~~~~v~~~~g~~~~~~~~~iR~s~~~~~t~~did~~~~~l~~ 371 (382)
T TIGR03403 328 DLEANPVMVAIGADKELAHTAIRLSLSRFTTEEEIDYTIEVFKK 371 (382)
T ss_pred CCCcCHHHHHcCCChHHhCeeEEEECCCCCCHHHHHHHHHHHHH
Confidence 0 126799999999999999999999964
No 61
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.89 E-value=3e-21 Score=222.34 Aligned_cols=312 Identities=15% Similarity=0.142 Sum_probs=210.3
Q ss_pred HHHHHHHHHHHHHHhhCCCcc--ccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCcc--HHHHHhcCCEEE
Q 001586 630 YQEMFNNLGEWLCTITGFDSF--SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTN--PATAAMCGMKIV 705 (1049)
Q Consensus 630 ~~~~i~el~~~la~l~G~~~~--~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~--pa~a~~~G~~Vv 705 (1049)
..+...++++.+++++|.+.. .+..++|+++...++ +.+. .++++||++...|..+ ...+++.|.+++
T Consensus 30 ~~~~~~~~~~~la~~~g~~~~~~~~~~~~~t~al~~~~---~~~~-----~~g~~vl~~~~~~~~~~~~~~~~~~g~~~~ 101 (356)
T cd06451 30 FLALMDEILEGLRYVFQTENGLTFLLSGSGTGAMEAAL---SNLL-----EPGDKVLVGVNGVFGDRWADMAERYGADVD 101 (356)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHHHHH---HHhC-----CCCCEEEEecCCchhHHHHHHHHHhCCCeE
Confidence 456788999999999998542 345666666553333 3321 2467899877656543 234678999999
Q ss_pred EEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-ccccccccHHHHHHHHHHcCCEEEEeccccccccCcCCCCccCC
Q 001586 706 SVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGA 784 (1049)
Q Consensus 706 ~V~~d~~g~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~Pg~~Ga 784 (1049)
.++.++++.+|++++++.+++ .++++|++++|+ .+|.+. |+++|+++||++|+++++|+++..+... ..++.+|+
T Consensus 102 ~v~~~~~~~~~~~~l~~~i~~--~~~~~v~i~~~~~~~G~~~-~~~~i~~~a~~~~~~li~D~~~~~g~~~-~~~~~~~~ 177 (356)
T cd06451 102 VVEKPWGEAVSPEEIAEALEQ--HDIKAVTLTHNETSTGVLN-PLEGIGALAKKHDALLIVDAVSSLGGEP-FRMDEWGV 177 (356)
T ss_pred EeecCCCCCCCHHHHHHHHhc--cCCCEEEEeccCCCccccc-CHHHHHHHHHhcCCEEEEeeehhccCcc-ccccccCc
Confidence 999988889999999999972 278899999985 599987 7999999999999999999986432211 23456789
Q ss_pred cEEEeCCCcccccCCCCCCCceeEEEEcccccccCCC--CccccCCCC---CCC-CCCCCCCCCCccchhhHHHHHHHHH
Q 001586 785 DVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPS--HPVVSTGGI---PAP-EKSQPLGTIAAAPWGSALILPISYT 858 (1049)
Q Consensus 785 Di~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg--~~vg~t~~~---~~~-~~~~~t~~i~sa~~g~~~~~~~a~a 858 (1049)
|++++++||+|+.| +|+|++++++++.+.+.. ...+...+. ... +......+.. +.....+..+
T Consensus 178 d~~~~s~~K~l~~p-----~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~-----~~~~~~a~~a 247 (356)
T cd06451 178 DVAYTGSQKALGAP-----PGLGPIAFSERALERIKKKTKPKGFYFDLLLLLKYWGEGYSYPHTP-----PVNLLYALRE 247 (356)
T ss_pred cEEEecCchhccCC-----CCcceeEECHHHHHHHHhcCCCCceeecHHHHHhhhcccCCCCCCC-----hHHHHHHHHH
Confidence 99999999999533 478999999876654421 111110000 000 0000111111 1122233445
Q ss_pred HHHHHchhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHHHC-CcccCC
Q 001586 859 YIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDY-GFHGPT 936 (1049)
Q Consensus 859 ~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~-~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~-Gi~~~~ 936 (1049)
.+..+..+|+.+..++..++++++.+.|++. +++..+ +.......+.+.++ .+.+..+++++|.++ ||.+..
T Consensus 248 al~~l~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~~~~~~~~~~~~-----~~~~~~~~~~~L~~~~gI~~~~ 321 (356)
T cd06451 248 ALDLILEEGLENRWARHRRLAKALREGLEALGLKLLAK-PELRSPTVTAVLVP-----EGVDGDEVVRRLMKRYNIEIAG 321 (356)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCeeccC-cccCCCceEEEECC-----CCCCHHHHHHHHHHhCCEEEec
Confidence 5666667788888888889999999999875 444321 11111111223333 245788999999987 998753
Q ss_pred CCCC-CCCEEEEEccCCCCHHHHHHHHHHHHHHH
Q 001586 937 MSWP-VPGTLMIEPTESESKEELDRYCDALISIR 969 (1049)
Q Consensus 937 ~~~p-~~~~lri~~t~~~t~eeid~fv~aL~~i~ 969 (1049)
...+ .++++|++++..++++||++|+++|++++
T Consensus 322 g~~~~~~~~iRis~~~~~~~e~v~~~~~~l~~~~ 355 (356)
T cd06451 322 GLGPTAGKVFRIGHMGEATREDVLGVLSALEEAL 355 (356)
T ss_pred ccccccCCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 2212 35799999999999999999999998865
No 62
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.89 E-value=4e-21 Score=228.24 Aligned_cols=343 Identities=18% Similarity=0.163 Sum_probs=222.1
Q ss_pred HHHH-HHHHHHHHhhCCCcc----ccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHH--------
Q 001586 632 EMFN-NLGEWLCTITGFDSF----SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAA-------- 698 (1049)
Q Consensus 632 ~~i~-el~~~la~l~G~~~~----~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~-------- 698 (1049)
+.++ ..++.+++++|.+.. ++++.||++++.+++.++. +++++||++...|+.+...+.
T Consensus 79 ~~iE~~ar~~~a~lf~a~~~~~~~~~~~~sgt~an~~v~~al~--------~~gd~Ii~~~~ehg~~l~~~~~l~~~~~~ 150 (452)
T PTZ00094 79 DKIENLCQKRALEAFGLDPEEWGVNVQPYSGSPANFAVYTALL--------QPHDRIMGLDLPSGGHLTHGFYTAKKKVS 150 (452)
T ss_pred HHHHHHHHHHHHHHhCCCcccceeecCCCchHHHHHHHHHHhc--------CCCCEEEecccccCCcccccccccccccc
Confidence 4444 367899999998753 3556778877755444441 246889998888988765321
Q ss_pred --hcCCEEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCCccccccccHHHHHHHHHHcCCEEEEeccccccccCc
Q 001586 699 --MCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGL 776 (1049)
Q Consensus 699 --~~G~~Vv~V~~d~~g~iD~~~L~~~i~~~~~~taaV~it~Pn~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl 776 (1049)
..+++++.++++.+|.+|+++|+++++++ +++.|++.. +.+|... |+++|+++||++|++++||++|..++.+.
T Consensus 151 ~~~~~~~~~~~~~~~~g~id~~~L~~~l~~~--~~~lvi~~~-s~~g~~~-di~~I~~i~~~~ga~l~vDaaq~~G~i~~ 226 (452)
T PTZ00094 151 ATSIYFESLPYQVNEKGLIDYDKLEELAKAF--RPKLIIAGA-SAYPRDI-DYKRFREICDSVGAYLMADIAHTSGLVAA 226 (452)
T ss_pred cceeeeeeeecccCCCCCcCHHHHHHHHHHh--CCCEEEEeC-CCCCCcc-CHHHHHHHHHHcCCEEEEeccchhccccC
Confidence 12355667777778999999999999753 344555544 4588887 89999999999999999999987665543
Q ss_pred C---CCCccCCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHH
Q 001586 777 T---SPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALIL 853 (1049)
Q Consensus 777 ~---~Pg~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~ 853 (1049)
. .|. .++|++++++|||| +||..|++++++.+.+.+.... .. ...+...+++ +...+
T Consensus 227 ~~~~~~~-~~~D~l~~S~hK~l------~GP~Gg~l~~~~~~~~~l~~~~-~~----------~~~p~~~G~~--~~~~i 286 (452)
T PTZ00094 227 GVLPSPF-PYADVVTTTTHKSL------RGPRSGLIFYRKKVKPDIENKI-NE----------AVFPGLQGGP--HNHQI 286 (452)
T ss_pred CCCCCCC-CCCcEEEcCCccCC------CCCCceEEEEecccchHHHHhh-cc----------ccCCCCCCCc--hHHHH
Confidence 2 232 38999999999999 4676688888765443221110 00 0000011111 11223
Q ss_pred HHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHHHCCc
Q 001586 854 PISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGF 932 (1049)
Q Consensus 854 ~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~-~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi 932 (1049)
++..+.+..+...++.+..++...++++|.++|++. +++...+. . .+..++++.. .+++..++.+.|.++||
T Consensus 287 aal~~al~~~~~~~~~~~~~~i~~l~~~l~~~L~~~g~~v~~~~~-~--~~~~~v~~~~----~~~~~~~~~~~L~~~gI 359 (452)
T PTZ00094 287 AAIAVQLKEVQSPEWKEYAKQVLKNAKALAAALEKRGYDLVTGGT-D--NHLVLVDLRP----FGITGSKMEKLLDAVNI 359 (452)
T ss_pred HHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHhCCcEEecCCC-C--CceEeecCCc----CCCCHHHHHHHHHHCCc
Confidence 334455566655677778888999999999999774 55543221 1 2335555531 25678899999988999
Q ss_pred ccCC--CCC---C-CCCEEEEEccCCCC----HHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccC-ccccccchhhH
Q 001586 933 HGPT--MSW---P-VPGTLMIEPTESES----KEELDRYCDALISIREEIAQIENGKADIHNNVLKVT-CLFLHHGYFFS 1001 (1049)
Q Consensus 933 ~~~~--~~~---p-~~~~lri~~t~~~t----~eeid~fv~aL~~i~~~i~~i~~g~~~~~~~~l~~~-ph~~~~~~~~~ 1001 (1049)
.+.. ..+ + .++.+|+++++.++ ++|||+++++|.+++.....+.++- ++-.+. .+...+...+.
T Consensus 360 ~vs~~~~p~~~~~~~~~~vRis~~~~tt~g~~~~di~~l~~~l~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 434 (452)
T PTZ00094 360 SVNKNTIPGDKSALNPSGVRLGTPALTTRGAKEKDFKFVADFLDRAVKLAQEIQKQV-----GKKLVDFKKALEKNPELQ 434 (452)
T ss_pred EEecccCCCCCcCCCCCeEEECCHHHHhCCCCHHHHHHHHHHHHHHHHHHhhhhhhc-----ccchhhhhhhcccHHHHH
Confidence 9742 111 0 24789999988776 9999999999999988755543332 222221 22223334455
Q ss_pred HHHHhHHHhhccCCCccccCchhh
Q 001586 1002 YIVKEINICISSSPWNQSLFMKPY 1025 (1049)
Q Consensus 1002 ~~~~~~~~~~~~~~w~~~~~~~~~ 1025 (1049)
.+-.++.+++ ..||+|-
T Consensus 435 ~~~~~~~~~~-------~~~p~~~ 451 (452)
T PTZ00094 435 KLRQEVVEFA-------SQFPFPG 451 (452)
T ss_pred HHHHHHHHHH-------HhCCCCC
Confidence 5555555554 5788874
No 63
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.89 E-value=3.7e-21 Score=225.02 Aligned_cols=310 Identities=17% Similarity=0.183 Sum_probs=205.5
Q ss_pred hcHHHHHHHHHHHHHHhhCCCccc-cccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHH----HHHhcCC
Q 001586 628 QGYQEMFNNLGEWLCTITGFDSFS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA----TAAMCGM 702 (1049)
Q Consensus 628 ~G~~~~i~el~~~la~l~G~~~~~-l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa----~a~~~G~ 702 (1049)
++..+.+.++++.+++++|.+... +..++++++...++.++. .. ..++++||++...|.++.. .++..|+
T Consensus 56 ~~~~~~~~~l~~~ia~~~~~~~~~v~~~~~~t~~l~~~~~~~~---~~--~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~ 130 (397)
T TIGR01976 56 RRADQVVDDAREAVADLLNADPPEVVFGANATSLTFLLSRAIS---RR--WGPGDEVIVTRLDHEANISPWLQAAERAGA 130 (397)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCeEEEeCCHHHHHHHHHHHHH---hc--CCCCCEEEEcCCchHhHHHHHHHHHHhcCC
Confidence 455677889999999999987543 334444444322222221 11 1356899998888866532 3567899
Q ss_pred EEEEEcCCC-CCCCCHHHHHHHHHhcCCCeEEEEEEcCC-ccccccccHHHHHHHHHHcCCEEEEeccccccccCcCCCC
Q 001586 703 KIVSVGTDA-KGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPG 780 (1049)
Q Consensus 703 ~Vv~V~~d~-~g~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~Pg 780 (1049)
+++.++.++ ++.+|+++|+++++ +++++|++++|+ .+|.+. |+++|+++||++|+++++|+++..+... ....
T Consensus 131 ~~~~~~~~~~~~~~~~~~l~~~i~---~~~~lv~i~~~~n~tG~~~-~~~~i~~~~~~~~~~~ivD~a~~~~~~~-~~~~ 205 (397)
T TIGR01976 131 KVKWARVDEATGELHPDDLASLLS---PRTRLVAVTAASNTLGSIV-DLAAITELVHAAGALVVVDAVHYAPHGL-IDVQ 205 (397)
T ss_pred EEEEEeccccCCCcCHHHHHHhcC---CCceEEEEeCCCCCCCccC-CHHHHHHHHHHcCCEEEEehhhhccccC-CCHH
Confidence 999999876 68999999999997 789999999995 599998 7999999999999999999987533221 2334
Q ss_pred ccCCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHH
Q 001586 781 YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYI 860 (1049)
Q Consensus 781 ~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l 860 (1049)
++++|++++++||+| ||++|++++++++...+................+.++.+ ++....+..+..++
T Consensus 206 ~~~~d~~~~s~~K~~-------g~~~G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~gt~~-----~~~~~~l~~al~~~ 273 (397)
T TIGR01976 206 ATGADFLTCSAYKFF-------GPHMGILWGRPELLMNLPPYKLTFSYDTGPERFELGTPQ-----YELLAGVVAAVDYL 273 (397)
T ss_pred HcCCCEEEEechhhc-------CCceEEEEEcHHHHhhCCCccccCccCCCcchhcCCCCC-----HHHHHHHHHHHHHH
Confidence 679999999999987 366899999987665543221111000000011112221 22223334455555
Q ss_pred HHHchh-----------hHHHHHHHHHHHHHHHHHHHhcc--CCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHH
Q 001586 861 AMMGSK-----------GLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRL 927 (1049)
Q Consensus 861 ~~lG~e-----------Gl~~~~~~~~~~a~yL~~~L~~~--~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L 927 (1049)
...|.+ ++.+..++..+++++++++|+++ +++..+.......+.+.+.++ +.+..++.++|
T Consensus 274 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~l~~~L 347 (397)
T TIGR01976 274 AGLGESANGSRRERLVASFQAIDAYENRLAEYLLVGLSDLPGVTLYGVARLAARVPTVSFTVH------GLPPQRVVRRL 347 (397)
T ss_pred HHhCcccccchhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCccCCCceEEEEeC------CcCHHHHHHHH
Confidence 555421 35566677778899999999874 333211000112333444433 35678899999
Q ss_pred HHCCcccCCCC-C----------C-CCCEEEEEccCCCCHHHHHHHHHHH
Q 001586 928 MDYGFHGPTMS-W----------P-VPGTLMIEPTESESKEELDRYCDAL 965 (1049)
Q Consensus 928 ~~~Gi~~~~~~-~----------p-~~~~lri~~t~~~t~eeid~fv~aL 965 (1049)
.++||.++... + + ..+.+||+++.++|++|+|+|+++|
T Consensus 348 ~~~gI~v~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l 397 (397)
T TIGR01976 348 ADQGIDAWAGHFYAVRLLRRLGLNDEGGVVRVGLAHYNTAEEVDRLLEAL 397 (397)
T ss_pred HHCCeEEEeCccchHHHHHHhCCCCCCCeEEEEeeccCCHHHHHHHHHhC
Confidence 99999986432 1 1 2368999999999999999999875
No 64
>PRK02948 cysteine desulfurase; Provisional
Probab=99.89 E-value=9e-21 Score=220.60 Aligned_cols=292 Identities=14% Similarity=0.088 Sum_probs=210.4
Q ss_pred HhhhHHHHHHHHHHHHHHHhCCCCcceEeccchHHHHHHHHHHhhhc-cCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEE
Q 001586 205 IAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQ-KGKKKTFIIASNCHPQTIDICITRADGFDIKV 283 (1049)
Q Consensus 205 ~sqg~le~l~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a~~~~-~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v 283 (1049)
......+.+.++++.+++++|.+..++.++.|+|.+...++.++... .+++++|+++..+||++...++. ++..|+++
T Consensus 37 ~~~~~~~~~~~~r~~la~~~g~~~~~i~~~~g~t~a~~~~~~~~~~~~~~~g~~vv~~~~~h~s~~~~~~~-~~~~g~~v 115 (381)
T PRK02948 37 IGGTASSLLQVCRKTFAEMIGGEEQGIYFTSGGTESNYLAIQSLLNALPQNKKHIITTPMEHASIHSYFQS-LESQGYTV 115 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHHHHHHHHhccCCCCEEEECCcccHHHHHHHHH-HHhCCCEE
Confidence 33445567889999999999998888989999897766555443211 13678999999999999998865 45679888
Q ss_pred EEeCc--------chhhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCC-CCCCcccceEE
Q 001586 284 VVSDL--------KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTIL-KPPGELGADIV 352 (1049)
Q Consensus 284 ~~v~~--------~~l~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l-~~p~~~GaDiv 352 (1049)
+.++. +++++ +.+++++|++++| |++|.+.|+++|+++||++|++++|+ ...+++.. ....++|+|++
T Consensus 116 ~~v~~~~~~~~d~~~l~~~l~~~~~lv~~~~~~n~tG~~~~~~~I~~l~~~~~~~vivD-~~~~~g~~~~~~~~~~~d~~ 194 (381)
T PRK02948 116 TEIPVDKSGLIRLVDLERAITPDTVLASIQHANSEIGTIQPIAEIGALLKKYNVLFHSD-CVQTFGKLPIDVFEMGIDSL 194 (381)
T ss_pred EEEeeCCCCCCCHHHHHHhcCCCCEEEEEECCcCCcEeehhHHHHHHHHHHcCCEEEEE-ChhhccccccCcccCCCCEE
Confidence 88765 23444 6778999999998 69999999999999999999999995 34455533 23467899999
Q ss_pred EecCccccccCCCCCCceEEEEEchhHHhcCCCceeeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHH
Q 001586 353 VGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAA 432 (1049)
Q Consensus 353 vgs~k~lg~P~~~GGP~~G~l~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irrekaTsni~t~~~l~a~~aa 432 (1049)
+.+++|+.+| ||.|++++++++. +.....+ + .+..+++.+|.|+ .+..++.++
T Consensus 195 ~~s~~K~~gp-----~G~G~l~~~~~~~--~~~~~~~------~-----------~~~~~~~~~t~~~---~~~~a~~~a 247 (381)
T PRK02948 195 SVSAHKIYGP-----KGVGAVYINPQVR--WKPVFPG------T-----------THEKGFRPGTVNV---PGIAAFLTA 247 (381)
T ss_pred EecHHhcCCC-----CcEEEEEEcCCCC--CCCcccC------C-----------CCCCCcCCCCccH---HHHHHHHHH
Confidence 9998445333 4589999987641 1110000 0 0112345678787 455566666
Q ss_pred HHHHHhCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEc--CCC--Cc-ceEEEecCC--HHHHHHHHHHcCCeeeeec--
Q 001586 433 MYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQ--GLP--FF-DTVKVKCAD--AHAIASAAYKIEMNLRVVD-- 503 (1049)
Q Consensus 433 ~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~g~~~v~--~~~--~~-~~v~i~~~~--~~~v~~~L~~~gI~~~~~~-- 503 (1049)
+ .++. ++++++.+++.++.+++.++|+++| +++. +.+ .. ..+.+..++ +.++...|.++||.++...
T Consensus 248 l--~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~-~~v~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~gI~v~~g~~c 323 (381)
T PRK02948 248 A--ENIL-KNMQEESLRFKELRSYFLEQIQTLP-LPIEVEGHSTSCLPHIIGVTIKGIEGQYTMLECNRRGIAISTGSAC 323 (381)
T ss_pred H--HHHH-HHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEeCCCccCcCCEEEEEeCCCCHHHHHHhcccCCEEEEchHhc
Confidence 5 2222 3578889999999999999999986 6543 211 12 234555554 6778888888999886310
Q ss_pred ---------------------CCeEEEEeccCCCHHHHHHHHHHHhC
Q 001586 504 ---------------------SNTVTASFDETTTLEDVDKLFIVFAG 529 (1049)
Q Consensus 504 ---------------------~~~vris~~~~~t~edid~lv~aL~~ 529 (1049)
.+.+|+|++.+||++|+|+|+++|+.
T Consensus 324 ~~~~~~p~~~~~~~~~~~~~~~~~lRis~~~~~t~~di~~l~~~l~~ 370 (381)
T PRK02948 324 QVGKQEPSKTMLAIGKTYEEAKQFVRFSFGQQTTKDQIDTTIHALET 370 (381)
T ss_pred CCCCCCCCHHHHHcCCChHHhCceEEEEcCCCCCHHHHHHHHHHHHH
Confidence 36899999999999999999999974
No 65
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.89 E-value=1.4e-20 Score=218.93 Aligned_cols=309 Identities=16% Similarity=0.181 Sum_probs=205.1
Q ss_pred HHHHHHHHHHHHHHhhCCCccc-cccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHH---HHhcCCEEE
Q 001586 630 YQEMFNNLGEWLCTITGFDSFS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT---AAMCGMKIV 705 (1049)
Q Consensus 630 ~~~~i~el~~~la~l~G~~~~~-l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~---a~~~G~~Vv 705 (1049)
..+.+.++++++++++|.+... +..++|++|...++.++..+ . +++++|+++...|.++... ++..|++++
T Consensus 40 ~~~~~~~~r~~la~~~g~~~~~i~~t~~~t~a~~~al~~~~~~--~---~~~~~vv~~~~~~~s~~~~~~~~~~~G~~v~ 114 (379)
T TIGR03402 40 VGKAVEEAREQVAKLLGAEPDEIIFTSGGTESDNTAIKSALAA--Q---PEKRHIITTAVEHPAVLSLCQHLEKQGYKVT 114 (379)
T ss_pred HHHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHHHHHHHHh--c---CCCCeEEEcccccHHHHHHHHHHHHcCCEEE
Confidence 3466789999999999987633 44556666665454443211 1 2357888888777665443 334799999
Q ss_pred EEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-ccccccccHHHHHHHHHHcCCEEEEeccccccccCcCCCCccCC
Q 001586 706 SVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGA 784 (1049)
Q Consensus 706 ~V~~d~~g~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~Pg~~Ga 784 (1049)
.+|.+++|.+|+++++++++ +++++|++++++ .+|.+. |+++|+++||++|+++++|+++..+...+ ...++++
T Consensus 115 ~v~~~~~g~~~~~~l~~~i~---~~~~lv~i~~~~n~tG~~~-~~~~I~~l~~~~g~~vivD~~~~~g~~~~-~~~~~~~ 189 (379)
T TIGR03402 115 YLPVDEEGRLDLEELRAAIT---DDTALVSVMWANNETGTIF-PIEEIGEIAKERGALFHTDAVQAVGKIPI-DLKEMNI 189 (379)
T ss_pred EEccCCCCcCCHHHHHHhcC---CCcEEEEEEcccCCeeecc-cHHHHHHHHHHcCCEEEEECccccccccc-CcccCCC
Confidence 99998889999999999997 788999999885 599998 79999999999999999999875433222 2346799
Q ss_pred cEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHc
Q 001586 785 DVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMG 864 (1049)
Q Consensus 785 Di~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG 864 (1049)
|++++++|| ++ |.+|+|++++++... ..| ...|.... ...+.++.++. + .....+.+..+
T Consensus 190 D~~~~s~~K-~~-----gp~G~g~l~v~~~~~-~~p-~~~g~~~~---~~~~~gt~~~~-------~-~~~l~~al~~~- 249 (379)
T TIGR03402 190 DMLSLSGHK-LH-----GPKGVGALYIRKGTR-FRP-LLRGGHQE---RGRRAGTENVP-------G-IVGLGKAAELA- 249 (379)
T ss_pred CEEEEcHHH-cC-----CCCceEEEEECCCCC-CCC-cccCCccC---CCcCCCCccHH-------H-HHHHHHHHHHH-
Confidence 999999999 42 345799999987642 112 11111100 11122222221 1 11122223332
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhc-cCCeeeccCCC-ceeeEEEEeccCccccCCCCHHHHHHHHHHCCcccCCCC-C--
Q 001586 865 SKGLTEASKIAILNANYMAKRLEK-HYPILFRGVNG-TVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMS-W-- 939 (1049)
Q Consensus 865 ~eGl~~~~~~~~~~a~yL~~~L~~-~~~v~~~g~~g-~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~-~-- 939 (1049)
.+++.+..++...+.+++.++|++ +..+...++.. .....+.+.++ +.+..++.+.|.++||.+..-. +
T Consensus 250 ~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~~gI~v~~g~~c~~ 323 (379)
T TIGR03402 250 TEHLEEENTRVRALRDRLEAGLLARIPDARLNGDPTKRLPNTVNISFE------YIEGEAILLLLDMEGICASSGSACTS 323 (379)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHhhCCCEEEeCCCccCCCCEEEEEec------CCCHHHHHHhhccCCEEEEchhhcCC
Confidence 335566667777888999999975 43332223211 11112333332 3567899999999999864211 0
Q ss_pred C-----------------CCCEEEEEccCCCCHHHHHHHHHHHHHHHHHHHH
Q 001586 940 P-----------------VPGTLMIEPTESESKEELDRYCDALISIREEIAQ 974 (1049)
Q Consensus 940 p-----------------~~~~lri~~t~~~t~eeid~fv~aL~~i~~~i~~ 974 (1049)
+ ..+.+|+|++.++|++|||+|++.|++++++.+.
T Consensus 324 ~~~~~~~~~~~lg~~~~~~~~~vR~S~~~~~t~~di~~~~~~l~~~~~~~~~ 375 (379)
T TIGR03402 324 GSLEPSHVLRAMGVPHTAAHGSIRFSLSRYNTEEDIDYVLEVLPPIIARLRA 375 (379)
T ss_pred CCCCcCHHHHHcCCChhhcCceEEEEcCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 0 1378999999999999999999999998876543
No 66
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.89 E-value=2.6e-21 Score=224.41 Aligned_cols=302 Identities=19% Similarity=0.248 Sum_probs=210.7
Q ss_pred HHHHHHHHHHHHHHhhCCCc-cc-cccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHH----HHhcCCE
Q 001586 630 YQEMFNNLGEWLCTITGFDS-FS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMK 703 (1049)
Q Consensus 630 ~~~~i~el~~~la~l~G~~~-~~-l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~----a~~~G~~ 703 (1049)
..+++.++++.+++++|.+. .. ++..+++.|...++..++. . ..++++|++....|.++... ++..|++
T Consensus 41 ~~~~~~~~r~~la~~lg~~~~~~v~~~~~~t~a~~~~~~~l~~---~--~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~ 115 (371)
T PF00266_consen 41 FAEILEEAREALAKLLGAPPDEEVVFTSNGTEALNAVASSLLN---P--LKPGDEVLVTSNEHPSNRYPWEEIAKRKGAE 115 (371)
T ss_dssp HHHHHHHHHHHHHHHHTSSTTEEEEEESSHHHHHHHHHHHHHH---H--GTTTCEEEEEESSHHHHHHHHHHHHHHTTEE
T ss_pred hhHHHHHHHHHHHHhcCCccccccccccccchhhhhhhhcccc---c--cccccccccccccccccccccccccccchhh
Confidence 45778899999999999988 44 3445555566444444421 1 12567899888777766522 3468999
Q ss_pred EEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-ccccccccHHHHHHHHHHcCCEEEEeccccccccCcCCCCcc
Q 001586 704 IVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI 782 (1049)
Q Consensus 704 Vv~V~~d~~g~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~Pg~~ 782 (1049)
|+.++.+.++.+|+++++++|+ +++.+|++++.+ .+|++. |+++|+++||++|++++||+++..+...+ ...++
T Consensus 116 v~~i~~~~~~~~~~~~~~~~l~---~~~~lv~~~~~~~~tG~~~-pi~~I~~~~~~~~~~~~vD~~~~~g~~~i-d~~~~ 190 (371)
T PF00266_consen 116 VRVIPADPGGSLDLEDLEEALN---PDTRLVSISHVENSTGVRN-PIEEIAKLAHEYGALLVVDAAQSAGCVPI-DLDEL 190 (371)
T ss_dssp EEEEEEGTTSSCSHHHHHHHHH---TTESEEEEESBETTTTBBS-SHHHHHHHHHHTTSEEEEE-TTTTTTSS---TTTT
T ss_pred hccccccccchhhhhhhhhhhc---cccceEEeecccccccEEe-eeceehhhhhccCCceeEechhccccccc-ccccc
Confidence 9999998899999999999998 899999999984 599998 79999999999999999999987555543 34578
Q ss_pred CCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccC-CCC----------CCCCCCCCCCCCCccchhhHH
Q 001586 783 GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVST-GGI----------PAPEKSQPLGTIAAAPWGSAL 851 (1049)
Q Consensus 783 GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t-~~~----------~~~~~~~~t~~i~sa~~g~~~ 851 (1049)
|+|++++++|| |+ |+||+|++++++++...+.....+.. .+. .....+.+|.++ .
T Consensus 191 ~~D~~~~s~~K-l~-----gp~G~g~l~v~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~--------~ 256 (371)
T PF00266_consen 191 GADFLVFSSHK-LG-----GPPGLGFLYVRPEAIERLRPAKPGGGYLDFPSLQEYGLADDARRFEGGTPNV--------P 256 (371)
T ss_dssp TESEEEEESTS-TT-----SSSTEEEEEEEHHHHHHHHTSSSSSSTTTHHHHHHHCHHSTTTGSSSSS--H--------H
T ss_pred ccceeeecccc-cC-----CCCchhhheehhhhhhccccccccccccccccchhcccccccccccccceee--------e
Confidence 99999999999 74 66799999999865555422222111 000 000011112221 1
Q ss_pred HHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhccCCeeeccC--CCceeeEEEEeccCccccCCCCHHHHHHHHHH
Q 001586 852 ILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGV--NGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMD 929 (1049)
Q Consensus 852 ~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~~~v~~~g~--~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~ 929 (1049)
...+....+..+...|+.++.++...+++++.+.|+++..+...++ .......+.+.++ +.+..++.+.|.+
T Consensus 257 ~~~~l~~al~~~~~~g~~~i~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~------~~~~~~~~~~L~~ 330 (371)
T PF00266_consen 257 AIYALNEALKLLEEIGIERIRERIRELAEYLREALEELPGIEVLGPDDEPRRPSIVSFNLP------GSDADDVVKYLEE 330 (371)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTEEESSSSCGGBGTTEEEEEET------TSSHHHHHHHHHH
T ss_pred hhhhHHHHHhhhhccccccchhhhhhHHHHHHhhhhcCCceeEeeecccccccceEEEeec------CCCHHHHHHHHhh
Confidence 1223345667776778888889999999999999998744333221 1112223445553 5688999999999
Q ss_pred CCcccCC-CCC--C------CCCEEEEEccCCCCHHHHHHH
Q 001586 930 YGFHGPT-MSW--P------VPGTLMIEPTESESKEELDRY 961 (1049)
Q Consensus 930 ~Gi~~~~-~~~--p------~~~~lri~~t~~~t~eeid~f 961 (1049)
+||.+.. ... | ..+.+|++++.++|++|||+|
T Consensus 331 ~~I~~~~G~~~~~~~~~~~~~~~~iRvS~~~~nt~~dv~~l 371 (371)
T PF00266_consen 331 RGIAVSTGSACAGPSLDILGMGGVIRVSLHYYNTEEDVDRL 371 (371)
T ss_dssp HTEEEEESTTTCHHHHHHHHTTTEEEEE-GTTSSHHHHHHH
T ss_pred cCEEEeccCcccHHHHHHhCCCCEEEEeccCCCCHHHHhhC
Confidence 9999754 111 1 248999999999999999987
No 67
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.88 E-value=2.6e-20 Score=222.44 Aligned_cols=383 Identities=15% Similarity=0.163 Sum_probs=232.2
Q ss_pred CCcccCCCCCHHHHHHHHHHHh-ccccCcCccccccccccccCccccccccccCcccccCCCCCchhhhhcHHHHHHHHH
Q 001586 560 THPVFNKYHTEHELLRYIHLLQ-SKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLG 638 (1049)
Q Consensus 560 ~~p~~~~~~se~e~~~~l~~l~-~~d~~~~~~~i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~~G~~~~i~el~ 638 (1049)
.+| ..+.+..++++.+.+.- ..-..+ .+.-++|+-+.-++...... .....-.+-+.+.. +.++...+++.++.
T Consensus 61 ~~p--~~~~~~~~~~~~~~~~~~~~~~~~-~hP~f~g~~~~~~p~~~~~l-~~l~~~lN~n~~~~-~~spa~t~lE~~v~ 135 (522)
T TIGR03799 61 EIP--EQPTFVSEHTQFLLDKLVAHSVHT-ASPSFIGHMTSALPYFMLPL-SKLMVALNQNLVKI-ETSKAFTPLERQVL 135 (522)
T ss_pred CCC--CCCCChHHHHHHHHHHHHcCCCCC-CCCCeEEeccCCCchHHHHH-HHHHHHhcCCccee-ecCcchHHHHHHHH
Confidence 455 45667777888855443 333333 23445665332222221110 00000122223333 67788889999999
Q ss_pred HHHHHhhCCC------------c-c-ccccCchHHHHHHHHHHHHHHHHh-c----CC-------------CCCCEEEEc
Q 001586 639 EWLCTITGFD------------S-F-SLQPNAGAAGEYAGLMVIRAYHKA-R----GD-------------HHRNVCIIP 686 (1049)
Q Consensus 639 ~~la~l~G~~------------~-~-~l~~~sGa~ge~a~l~air~y~~~-~----G~-------------~~r~~VLip 686 (1049)
+|++++++.. . . -...++|+.++..++.++|..... . |. .++..|+++
T Consensus 136 ~wl~~l~~~~~~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~v~~S 215 (522)
T TIGR03799 136 GMMHHLVYGQDDDFYRKWMHSADHSLGAFCSGGTVANITALWVARNRLLKADGDFKGVAREGLFAALKHYGYDGLAILVS 215 (522)
T ss_pred HHHHHHhccCcccchhhcccCCCCCCeEEcCchHHHHHHHHHHHHHHhccccccccccccccchhhhhhccCCceEEEEC
Confidence 9999998521 1 1 234556777777777777654211 0 00 124578899
Q ss_pred CCCCCccHHHHHhcCC---EEEEEcCCCCCCCCHHHHHHHHHhc---CCCeEEEEEEcCCc-cccccccHHHHHHHHHHc
Q 001586 687 VSAHGTNPATAAMCGM---KIVSVGTDAKGNINIEELRKAAEAN---RDNLSTLMVTYPST-HGVYEEGIDEICKIIHDN 759 (1049)
Q Consensus 687 ~saHg~~pa~a~~~G~---~Vv~V~~d~~g~iD~~~L~~~i~~~---~~~taaV~it~Pn~-~G~i~~di~eI~~lah~~ 759 (1049)
..+|.++.+++...|+ +++.||+|++|++|+++|+++|++. +.++.+|+.+..++ +|.++ |+++|+++|+++
T Consensus 216 ~~~H~S~~kaa~~lglg~~~v~~vp~d~~g~~d~~~L~~~i~~~~~~g~~~~~vvataGtt~tGaiD-pl~eIa~i~~~~ 294 (522)
T TIGR03799 216 ERGHYSLGKAADVLGIGRDNLIAIKTDANNRIDVDALRDKCAELAEQNIKPLAIVGVAGTTETGNID-PLDEMADIAQEL 294 (522)
T ss_pred CCchHHHHHHHHHcCCCcccEEEEEeCCCCcCCHHHHHHHHHHHHHCCCCcEEEEEEecCcCCCCcC-CHHHHHHHHHHc
Confidence 9999999999999998 8999999999999999999999632 23455565556554 99999 799999999999
Q ss_pred CCEEEEeccccccccCcCC------CCccCCcEEEeCCCcccccCCCCCCCceeEEEEcc-cccccCCCCccccCCCCCC
Q 001586 760 GGQVYMDGANMNAQVGLTS------PGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKK-HLAPFLPSHPVVSTGGIPA 832 (1049)
Q Consensus 760 G~ll~vD~A~~~a~~gl~~------Pg~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~-~l~~~lpg~~vg~t~~~~~ 832 (1049)
|+++|||+|+..+.. +.. .|-.++|.+++|+|||+..|+ |+|++++++ .+.+.+.............
T Consensus 295 g~~lHVDaA~gg~~~-~~~~~r~~l~gle~aDSit~d~HK~l~~P~-----g~G~llvr~~~~~~~~~~~~~Yl~~~~~~ 368 (522)
T TIGR03799 295 GCHFHVDAAWGGATL-LSNTYRHLLKGIERADSVTIDAHKQLYVPM-----GAGMVLFKDPALMSAIEHHAEYILRKGSK 368 (522)
T ss_pred CCeEEEEchhhhHHH-hCHHHHHHhcCchhCCEEEEChhhcCCcCc-----ccEEEEEeCHHHHHHhccCcchhcCCCCC
Confidence 999999998542211 111 122479999999999996554 457888875 3333222110000000000
Q ss_pred CCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc--CCeeeccCCCceeeEEEEecc
Q 001586 833 PEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEFIVDLR 910 (1049)
Q Consensus 833 ~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~--~~v~~~g~~g~~~~e~iv~~~ 910 (1049)
......... + -...+...|+.|+.+|.+|++++.++.+++++|+.+.|++. ++++. + +..+.++|+..
T Consensus 369 d~~~~~leg--s----R~~~al~lw~aL~~lG~~G~~~ii~~~~~la~~l~~~L~~~~~~el~~--~--p~l~iv~Fr~~ 438 (522)
T TIGR03799 369 DLGSHTLEG--S----RPGMAMLVYAGLHIIGRKGYELLIDQSIEKAKYFADLIQQQPDFELVT--E--PELCLLTYRYV 438 (522)
T ss_pred ccccceeec--C----cchHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEec--C--CCccEEEEEEe
Confidence 000111111 1 11223457999999999999999999999999999999875 55542 2 33444556543
Q ss_pred C--cccc-----------CC--CC--HHHHHHHHHHCCccc-C-C-CC---CC-C-CCEEEEEcc-CCCCHHHHHHHHHH
Q 001586 911 G--LKNT-----------AG--IE--PEDVAKRLMDYGFHG-P-T-MS---WP-V-PGTLMIEPT-ESESKEELDRYCDA 964 (1049)
Q Consensus 911 ~--~~~~-----------~g--~~--~~~v~k~L~~~Gi~~-~-~-~~---~p-~-~~~lri~~t-~~~t~eeid~fv~a 964 (1049)
+ .... .+ .+ ...|.+++.+.|... . + +. |. . ...+|+++. +.+|+++|+.+++.
T Consensus 439 p~~~~~~l~~~~~~~~~~~~~~~~~ln~~i~~~~~~~G~~~vs~t~l~~~~~~g~~~~~lR~~~~np~tt~~~i~~~l~~ 518 (522)
T TIGR03799 439 PEEVQQALAKADEEQREKINELLDRLTKFIQKRQREAGKSFVSRTRLTPAQYDHQPTVVFRVVLANPLTTHEILQDILDE 518 (522)
T ss_pred ChhhcccccccchhhhhhHHHHHHHHHHHHHHHHHhcCCEEEEEEEecccccCCCCcEEEEEEecCCCCCHHHHHHHHHH
Confidence 2 0000 00 00 134666677777653 1 1 11 11 0 146899884 67888989887764
No 68
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.88 E-value=8.3e-20 Score=211.65 Aligned_cols=342 Identities=15% Similarity=0.194 Sum_probs=222.7
Q ss_pred CHHHHHHHHHHHhcCCCcc---ccccCCCCCCCCCcHHHHHHHHhCCccccccCCChhhHhhhHHHHHHHHHHHHHHHhC
Q 001586 149 TESQMIEHMQKLASMNKVY---KSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTG 225 (1049)
Q Consensus 149 sE~e~~~~~~~la~~n~~~---~~~lG~g~y~~~~p~~i~~~~~~~~~~~t~ytpyq~e~sqg~le~l~e~q~~ia~L~G 225 (1049)
||.|+++.+.++-+....+ +.++..+..+ .|.+.. .+.. ++..+ ...+....|..+...++++.+++++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-a~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~la~~~g 73 (373)
T TIGR03812 1 SEEEVLEELKEYRSEDLKYSDGRILGSMCTNP--HPIAVK-AYDM---FIETN-LGDPGLFPGTKKIEEEVVGSLGNLLH 73 (373)
T ss_pred CHHHHHHHHHHHHhcCCCCCCCcEEEEEeCCc--hHHHHH-HHHH---HhhcC-CCCcccCccHHHHHHHHHHHHHHHhC
Confidence 6899999999986554433 1233334332 333221 1211 11111 11112223556677888999999999
Q ss_pred CCCcceEeccchHHHHHHHHHHhhh---ccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc--------chhhc-
Q 001586 226 LPMSNASLLDEGTAAAEAMAMCNNI---QKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--------KDIDY- 293 (1049)
Q Consensus 226 ~~~~n~sl~~~~Ta~~eA~~~a~~~---~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~~--------~~l~~- 293 (1049)
++.+++.++.++|.+...++.++.. ..+++++|++++..|+++...++ ..|++++.++. +++++
T Consensus 74 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~vl~~~~~h~~~~~~~~----~~G~~~~~v~~~~~~~~d~~~l~~~ 149 (373)
T TIGR03812 74 LPDAYGYIVSGGTEANIQAVRAAKNLAREEKRTPNIIVPESAHFSFEKAAE----MLGLELRYAPLDEDYTVDVKDVEDL 149 (373)
T ss_pred CCCCCeEEeccHHHHHHHHHHHHHHHHhccCCCcEEEECCcchHHHHHHHH----HcCCeEEEEeeCCCCCcCHHHHHHH
Confidence 9988888899988766554443321 11356899999999998776653 45888887764 34444
Q ss_pred cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCC-------C----CCCcccceEEEecCccccc
Q 001586 294 KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTIL-------K----PPGELGADIVVGSAQRFGV 361 (1049)
Q Consensus 294 l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l-------~----~p~~~GaDivvgs~k~lg~ 361 (1049)
+++++.++++..| |++|.+.|+++|+++||++|++++|+. .++.+.+ . .....|+|.+..++++|+.
T Consensus 150 l~~~~~~vv~~~~~~~tG~~~~~~~i~~l~~~~~~~livD~-a~~~~~~~~~~~~~~~~~~d~~~~~~d~~~~s~~K~~~ 228 (373)
T TIGR03812 150 IDDNTIGIVGIAGTTELGQIDDIEELSKIALENGIYLHVDA-AFGGFVIPFLKKGYNPPPFDFSLPGVQSITIDPHKMGL 228 (373)
T ss_pred HhhCcEEEEEECCCCCCCccCCHHHHHHHHHHcCCeEEEEc-CchhHHHHHHhcCCCCCCccccCCCCCEEEECccccCC
Confidence 6666655544444 789999999999999999999999943 2221110 0 1123589999999865643
Q ss_pred -cCCCCCCceEEEEEchhHHhcCCCceeeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCc
Q 001586 362 -PMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGP 440 (1049)
Q Consensus 362 -P~~~GGP~~G~l~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irrekaTsni~t~~~l~a~~aa~y~~~~g~ 440 (1049)
|. |..|+++.++++.+.+... .+ |.. . .+ + ....+|.|. ..+.++.++ +.+++.
T Consensus 229 ~~~----~~G~~~~~~~~~~~~l~~~----------~~-~~~-~-~~-~--~~~~gt~~~---~~~~~~~~~--l~~l~~ 283 (373)
T TIGR03812 229 SPI----PAGGILFRSKSYLKYLSVD----------AP-YLT-V-KK-Q--ATITGTRSG---ASAAATYAV--IKYLGR 283 (373)
T ss_pred CcC----CceEEEEeCHHHHhhhccc----------Cc-ccC-C-CC-C--cceEeechh---HHHHHHHHH--HHHhCH
Confidence 32 3445676777777665210 00 100 0 00 0 001234443 223333334 477889
Q ss_pred chHHHHHHHHHHHHHHHHHHhhcCCCeEEcCCCCcceEEEecCCHHHHHHHHHHcCCeeeee-cCCeEEEEeccCCCHHH
Q 001586 441 EGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVV-DSNTVTASFDETTTLED 519 (1049)
Q Consensus 441 ~Gl~~ia~~~~~~a~~l~~~L~~~g~~~v~~~~~~~~v~i~~~~~~~v~~~L~~~gI~~~~~-~~~~vris~~~~~t~ed 519 (1049)
+|++++.+++.+++++|+++|+++| +..+..+..+.+.+..++..++.++|.++||.++.. .+..+|+|++.++|++|
T Consensus 284 ~g~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~v~~~~~~~~~v~~~L~~~gi~v~~~~~~~~iRis~~~~~t~ed 362 (373)
T TIGR03812 284 EGYRKIVAECMENTRYLVEELKKIG-FEPVIEPVLNIVAFEVDDPEEVRKKLRDRGWYVSVTRCPKALRIVVMPHVTREH 362 (373)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCC-CeEEcCCCceEEEEEeCCHHHHHHHHHHCCceeccCCCCCEEEEEEECCCCHHH
Confidence 9999999999999999999999997 654323444566677666678999999999998764 35789999999999999
Q ss_pred HHHHHHHHh
Q 001586 520 VDKLFIVFA 528 (1049)
Q Consensus 520 id~lv~aL~ 528 (1049)
+|+|+++|+
T Consensus 363 id~l~~~L~ 371 (373)
T TIGR03812 363 IEEFLEDLK 371 (373)
T ss_pred HHHHHHHHh
Confidence 999999985
No 69
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.87 E-value=5e-20 Score=216.02 Aligned_cols=308 Identities=14% Similarity=0.157 Sum_probs=203.8
Q ss_pred HHHHHHHHHHHHhhCCCcc-ccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHH---HHhcCCEEEEE
Q 001586 632 EMFNNLGEWLCTITGFDSF-SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT---AAMCGMKIVSV 707 (1049)
Q Consensus 632 ~~i~el~~~la~l~G~~~~-~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~---a~~~G~~Vv~V 707 (1049)
+.+.++++.+++++|.+.. .++.++|+++...++.++..+.. +++++|+++...|.++... ++..|++++.+
T Consensus 47 ~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~~l~~l~~~~~----~~g~~Vi~~~~~h~s~~~~~~~~~~~g~~v~~v 122 (402)
T TIGR02006 47 EAVENARNQVAELIGADSREIVFTSGATESNNLAIKGIAHFYK----SKGNHIITSKTEHKAVLDTCRYLEREGFEVTYL 122 (402)
T ss_pred HHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhhc----CCCCEEEECCCccHHHHHHHHHHHhcCCEEEEE
Confidence 5677899999999998753 34556666666555444432111 2467899998888766544 34569999999
Q ss_pred cCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-ccccccccHHHHHHHHHHcCCEEEEeccccccccCcCCCCccCCcE
Q 001586 708 GTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADV 786 (1049)
Q Consensus 708 ~~d~~g~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~Pg~~GaDi 786 (1049)
+++++|.+|+++|+++++ +++++|++++++ .+|.+. |+++|+++||++|++++||+++..+...+ ...++++|+
T Consensus 123 ~~~~~~~~d~~~l~~~l~---~~~~lv~v~~~~n~tG~~~-~~~~I~~l~~~~g~~livD~a~a~g~~~~-~~~~~~~D~ 197 (402)
T TIGR02006 123 PPKSNGLIDLEELKAAIR---DDTILVSIMHVNNEIGVIQ-DIAAIGEICRERKVFFHVDAAQSVGKIPI-NVNELKVDL 197 (402)
T ss_pred ccCCCCcCCHHHHHHhcC---CCCEEEEEECCCcCceecc-cHHHHHHHHHHcCCEEEEEcchhcCCccc-CccccCCCE
Confidence 998889999999999997 678999999995 599998 79999999999999999999976443322 234679999
Q ss_pred EEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchh
Q 001586 787 CHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSK 866 (1049)
Q Consensus 787 ~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~e 866 (1049)
+++++||++ |.+|+|+++++++....+.....+... .++.+.++.++. ... .....+..+ .+
T Consensus 198 ~~~s~~K~~------gp~G~G~l~~~~~~~~~~~~~~~g~~~---~~~~~~gt~~~~-----~~~---al~~al~~~-~~ 259 (402)
T TIGR02006 198 MSISGHKIY------GPKGIGALYVRRKPRVRLEALIHGGGH---ERGMRSGTLPTH-----QIV---GMGEAFRIA-KE 259 (402)
T ss_pred EEEehhhhc------CCCceEEEEEccCCCCCCCceecCCCc---cCCccCCCccHH-----HHH---HHHHHHHHH-HH
Confidence 999999965 334799999997544333211111100 011122222221 111 122333333 24
Q ss_pred hHHHHHHHHHHHHHHHHHHHhccCCeeeccCCC-ceeeEEEEeccCccccCCCCHHHHHHHHHHCCcccCC---CC----
Q 001586 867 GLTEASKIAILNANYMAKRLEKHYPILFRGVNG-TVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPT---MS---- 938 (1049)
Q Consensus 867 Gl~~~~~~~~~~a~yL~~~L~~~~~v~~~g~~g-~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~---~~---- 938 (1049)
++..+.++...+++++.++|+++..+...++.. ...+.+++.+. +++.+++..+|. |+.+++ +.
T Consensus 260 ~~~~~~~~~~~l~~~l~~~l~~~~~v~~~~~~~~~~p~~~~v~f~------~~~~~~~~~~l~--~i~v~~G~~c~~~~~ 331 (402)
T TIGR02006 260 EMAQDTAHVLALRDRLLNGIKSIEEVYLNGDLEHRVPGNLNVSFN------YVEGESLIMALK--DLAVSSGSACTSASL 331 (402)
T ss_pred hHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCeEEEEEe------CcCHHHHHHhcC--CEEEechhhcCCCCC
Confidence 666777788888999999998753332222111 11122345443 245667776663 443211 00
Q ss_pred --------CCC-----CCEEEEEccCCCCHHHHHHHHHHHHHHHHHHHH
Q 001586 939 --------WPV-----PGTLMIEPTESESKEELDRYCDALISIREEIAQ 974 (1049)
Q Consensus 939 --------~p~-----~~~lri~~t~~~t~eeid~fv~aL~~i~~~i~~ 974 (1049)
.++ .+.+|+|+..++|++|||+|+++|+++.+.++.
T Consensus 332 ~~~~~l~~lg~~~~~~~~~vR~S~~~~~t~edid~l~~~l~~~~~~~~~ 380 (402)
T TIGR02006 332 EPSYVLRALGINDELAHSSIRFTIGRFTTEEEIDYAVKLVKSAIDKLRE 380 (402)
T ss_pred CccHHHHHcCCChhhcCceEEEEecCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 001 378999999999999999999999999887654
No 70
>PRK02948 cysteine desulfurase; Provisional
Probab=99.87 E-value=6.6e-20 Score=213.39 Aligned_cols=306 Identities=16% Similarity=0.197 Sum_probs=205.9
Q ss_pred HHHHHHHHHHHHHhhCCCcccc-ccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHH---HHhcCCEEEE
Q 001586 631 QEMFNNLGEWLCTITGFDSFSL-QPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT---AAMCGMKIVS 706 (1049)
Q Consensus 631 ~~~i~el~~~la~l~G~~~~~l-~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~---a~~~G~~Vv~ 706 (1049)
.+.+.++++.+++++|.+...+ ..++++++...++.++. ... .+++++|+++...|.++..+ ++..|++++.
T Consensus 42 ~~~~~~~r~~la~~~g~~~~~i~~~~g~t~a~~~~~~~~~---~~~-~~~g~~vv~~~~~h~s~~~~~~~~~~~g~~v~~ 117 (381)
T PRK02948 42 SSLLQVCRKTFAEMIGGEEQGIYFTSGGTESNYLAIQSLL---NAL-PQNKKHIITTPMEHASIHSYFQSLESQGYTVTE 117 (381)
T ss_pred HHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHHHHHHH---Hhc-cCCCCEEEECCcccHHHHHHHHHHHhCCCEEEE
Confidence 3567899999999999876444 34445555543333332 110 12457889988888877665 4567999999
Q ss_pred EcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-ccccccccHHHHHHHHHHcCCEEEEeccccccccCcCCCCccCCc
Q 001586 707 VGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGAD 785 (1049)
Q Consensus 707 V~~d~~g~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~Pg~~GaD 785 (1049)
++++++|.+|+++|+++++ +++++|++++|+ .+|.+. |+++|+++|+++|++++||+++..+...+ ...+++.|
T Consensus 118 v~~~~~~~~d~~~l~~~l~---~~~~lv~~~~~~n~tG~~~-~~~~I~~l~~~~~~~vivD~~~~~g~~~~-~~~~~~~d 192 (381)
T PRK02948 118 IPVDKSGLIRLVDLERAIT---PDTVLASIQHANSEIGTIQ-PIAEIGALLKKYNVLFHSDCVQTFGKLPI-DVFEMGID 192 (381)
T ss_pred EeeCCCCCCCHHHHHHhcC---CCCEEEEEECCcCCcEeeh-hHHHHHHHHHHcCCEEEEEChhhcccccc-CcccCCCC
Confidence 9998889999999999996 688999999995 599998 79999999999999999998865433222 23467999
Q ss_pred EEEeCCCcccccCCCCCCCceeEEEEccccc--ccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHH
Q 001586 786 VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLA--PFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMM 863 (1049)
Q Consensus 786 i~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~--~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~l 863 (1049)
+++.++||+| |.+|+|++++++++. +..++. . . ..+.+.++.++ ....++.+.+..+
T Consensus 193 ~~~~s~~K~~------gp~G~G~l~~~~~~~~~~~~~~~---~-~---~~~~~~~t~~~--------~~~~a~~~al~~~ 251 (381)
T PRK02948 193 SLSVSAHKIY------GPKGVGAVYINPQVRWKPVFPGT---T-H---EKGFRPGTVNV--------PGIAAFLTAAENI 251 (381)
T ss_pred EEEecHHhcC------CCCcEEEEEEcCCCCCCCcccCC---C-C---CCCcCCCCccH--------HHHHHHHHHHHHH
Confidence 9999999976 445789999987641 111111 0 0 00111111111 1112223333333
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCc-eeeEEEEeccCccccCCCCHHHHHHHHHHCCcccCCCC---
Q 001586 864 GSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGT-VAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMS--- 938 (1049)
Q Consensus 864 G~eGl~~~~~~~~~~a~yL~~~L~~~-~~v~~~g~~g~-~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~--- 938 (1049)
. +++.+..++..++++++.++|++. +++...+.... ....+.+.++ +++..++.+.|.++||.++..+
T Consensus 252 ~-~~~~~~~~~~~~~~~~l~~~L~~~~~~v~~~~~~~~~~~~i~~~~~~------~~~~~~~~~~l~~~gI~v~~g~~c~ 324 (381)
T PRK02948 252 L-KNMQEESLRFKELRSYFLEQIQTLPLPIEVEGHSTSCLPHIIGVTIK------GIEGQYTMLECNRRGIAISTGSACQ 324 (381)
T ss_pred H-HHHHHHHHHHHHHHHHHHHHHhcCCCCEEEeCCCccCcCCEEEEEeC------CCCHHHHHHhcccCCEEEEchHhcC
Confidence 2 356667788888999999999886 45432221111 1111222322 3567888888988999976321
Q ss_pred --C--C-------------CCCEEEEEccCCCCHHHHHHHHHHHHHHHHHHH
Q 001586 939 --W--P-------------VPGTLMIEPTESESKEELDRYCDALISIREEIA 973 (1049)
Q Consensus 939 --~--p-------------~~~~lri~~t~~~t~eeid~fv~aL~~i~~~i~ 973 (1049)
+ | ..+.+|++++.++|++|+|+|+++|+++++...
T Consensus 325 ~~~~~p~~~~~~~~~~~~~~~~~lRis~~~~~t~~di~~l~~~l~~~~~~~~ 376 (381)
T PRK02948 325 VGKQEPSKTMLAIGKTYEEAKQFVRFSFGQQTTKDQIDTTIHALETIGNQFY 376 (381)
T ss_pred CCCCCCCHHHHHcCCChHHhCceEEEEcCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 1 1 136899999999999999999999999876543
No 71
>PLN02651 cysteine desulfurase
Probab=99.87 E-value=2.9e-20 Score=215.12 Aligned_cols=295 Identities=13% Similarity=0.141 Sum_probs=198.1
Q ss_pred HHHHHHHHHHHHHHhhCCCccc-cccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHH---HHhcCCEEE
Q 001586 630 YQEMFNNLGEWLCTITGFDSFS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT---AAMCGMKIV 705 (1049)
Q Consensus 630 ~~~~i~el~~~la~l~G~~~~~-l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~---a~~~G~~Vv 705 (1049)
..+.+.++++.+++++|.+... ++.++++++...++.++..+.. +++++||++...|.++... ++..|++++
T Consensus 41 ~~~~~~~~r~~la~~~g~~~~~v~~t~~~t~a~~~~l~~~~~~~~----~~g~~vl~~~~~h~s~~~~~~~~~~~g~~v~ 116 (364)
T PLN02651 41 SEDAVEKARAQVAALIGADPKEIIFTSGATESNNLAIKGVMHFYK----DKKKHVITTQTEHKCVLDSCRHLQQEGFEVT 116 (364)
T ss_pred HHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhcc----CCCCEEEEcccccHHHHHHHHHHHhcCCEEE
Confidence 3466889999999999987543 4445566655444444322111 2467899988888765443 235799999
Q ss_pred EEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-ccccccccHHHHHHHHHHcCCEEEEeccccccccCcCCCCccCC
Q 001586 706 SVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGA 784 (1049)
Q Consensus 706 ~V~~d~~g~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~Pg~~Ga 784 (1049)
.++++++|.+|+++|+++++ +++++|++++++ .+|.+. |+++|+++||++|++++||+++..+...+ .+.++|+
T Consensus 117 ~v~~~~~~~~d~~~l~~~i~---~~t~lv~v~~~~n~tG~~~-~l~~I~~~~~~~g~~~~vD~a~~~g~~~~-~~~~~~~ 191 (364)
T PLN02651 117 YLPVKSDGLVDLDELAAAIR---PDTALVSVMAVNNEIGVIQ-PVEEIGELCREKKVLFHTDAAQAVGKIPV-DVDDLGV 191 (364)
T ss_pred EEccCCCCcCCHHHHHHhcC---CCcEEEEEECCCCCceecc-cHHHHHHHHHHcCCEEEEEcchhhCCccc-CcccCCC
Confidence 99998889999999999997 789999999985 599998 79999999999999999999976444332 4567899
Q ss_pred cEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHc
Q 001586 785 DVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMG 864 (1049)
Q Consensus 785 Di~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG 864 (1049)
|++++++|||+ |.+|+|+++++++....+.....|...+ .+++.+|.++.. ...+ .+.+..+-
T Consensus 192 D~~~~s~hK~~------gp~G~g~l~v~~~~~~~l~p~~~g~~~~---~~~~~GT~~~~~-----~~~l---~~al~~~~ 254 (364)
T PLN02651 192 DLMSISGHKIY------GPKGVGALYVRRRPRVRLEPLMSGGGQE---RGRRSGTENTPL-----VVGL---GAACELAM 254 (364)
T ss_pred CEEEechhhhC------CCCceEEEEEcCCCCCCCCccccCCCcc---CCccCCCccHHH-----HHHH---HHHHHHHH
Confidence 99999999963 3458999999987666654333332110 112233333321 1222 23333333
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhcc---CCeeec-cCCCceeeEEEEeccCccccCCCCHHHHHHHHHHCCcccCC---C
Q 001586 865 SKGLTEASKIAILNANYMAKRLEKH---YPILFR-GVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPT---M 937 (1049)
Q Consensus 865 ~eGl~~~~~~~~~~a~yL~~~L~~~---~~v~~~-g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~---~ 937 (1049)
. +..++.++...+++++.++|++. +++..+ .+.....+.+.|.++ +++..+++++|.+ |.++. +
T Consensus 255 ~-~~~~i~~~~~~l~~~l~~~l~~~~~~~~i~~~~~~~~~~~~i~~~~~~------~~~~~~~~~~L~~--i~v~~g~~c 325 (364)
T PLN02651 255 K-EMDYDEKHMKALRERLLNGLRAKLGGVRVNGPRDPEKRYPGTLNLSFA------YVEGESLLMGLKE--VAVSSGSAC 325 (364)
T ss_pred H-hHHHHHHHHHHHHHHHHHHHHhhCCCEEEECCCCcccCcCCEEEEEeC------CCCHHHHHHHhCC--EEEEchhhc
Confidence 2 34666777888999999999752 333321 111111223445543 5678899999965 65431 1
Q ss_pred CCC-----------------CCCEEEEEccCCCCHHHHH
Q 001586 938 SWP-----------------VPGTLMIEPTESESKEELD 959 (1049)
Q Consensus 938 ~~p-----------------~~~~lri~~t~~~t~eeid 959 (1049)
+.+ ..+.+|+|+..++|++|||
T Consensus 326 ~~~~~~~~~~~~~~g~~~~~~~~~vR~S~~~~~t~~did 364 (364)
T PLN02651 326 TSASLEPSYVLRALGVPEEMAHGSLRLGVGRFTTEEEVD 364 (364)
T ss_pred CCCCCCcCHHHHHcCCChHHhCceEEEEcCCCCCHHHcC
Confidence 111 1378999999999999986
No 72
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.87 E-value=1.5e-19 Score=210.45 Aligned_cols=308 Identities=15% Similarity=0.162 Sum_probs=199.3
Q ss_pred HHHHHHHHHHhhCC-Cccc-cccCchHHHHHHHHHHHHHHHHhc-CCCCCCEEEEcCCCCCccHHH---HHhcCCEEEEE
Q 001586 634 FNNLGEWLCTITGF-DSFS-LQPNAGAAGEYAGLMVIRAYHKAR-GDHHRNVCIIPVSAHGTNPAT---AAMCGMKIVSV 707 (1049)
Q Consensus 634 i~el~~~la~l~G~-~~~~-l~~~sGa~ge~a~l~air~y~~~~-G~~~r~~VLip~saHg~~pa~---a~~~G~~Vv~V 707 (1049)
+.+..+.+.+.+|. +... +..++++++.. ++++.+.... -.+++++|+++...|.++..+ ++..|++++.+
T Consensus 44 l~~a~~~~~~~~~~~~~~~i~~t~g~teal~---~~~~~~~~~~~~~~~~~~vi~~~~e~ps~~~~~~~~~~~G~~v~~v 120 (382)
T TIGR03403 44 IAEALDKLYKGINARDLDDIIITSCATESNN---WVLKGVYFDEILKGGKNHIITTEVEHPAVRATCAFLESLGVEVTYL 120 (382)
T ss_pred HHHHHHHHHHHcCcCCCCeEEEeCCHHHHHH---HHHHHHHHhhcccCCCCEEEEcCCccHHHHHHHHHHHHCCCEEEEE
Confidence 44555555556665 3333 34444554443 3333321100 011346799988888776654 45689999999
Q ss_pred cCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-ccccccccHHHHHHHHHHcCCEEEEeccccccccCcCCCCccCCcE
Q 001586 708 GTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADV 786 (1049)
Q Consensus 708 ~~d~~g~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~Pg~~GaDi 786 (1049)
|++++|.+|+++|+++++ +++++|++++|+ .+|.+. |+++|+++||++|+++++|+++..+... ....++|+|+
T Consensus 121 ~~~~~g~~d~~~l~~~i~---~~t~lv~~~~~~n~tG~~~-~~~~I~~la~~~g~~~ivD~a~~~g~~~-~~~~~~~~D~ 195 (382)
T TIGR03403 121 PINEQGTITAEQVREAIT---EKTALVSVMWANNETGMIF-PIKEIGEICKERGVLFHTDAVQAIGKIP-VDVQKAGVDF 195 (382)
T ss_pred ecCCCCCCCHHHHHHhcc---cCCeEEEEEcccCCCcccc-CHHHHHHHHHHcCCEEEEechhhcCCCc-cCccccCCCE
Confidence 998889999999999997 788999999985 599998 7999999999999999999986533222 2344679999
Q ss_pred EEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchh
Q 001586 787 CHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSK 866 (1049)
Q Consensus 787 ~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~e 866 (1049)
+++++||++ |.||+|++++++.+. ..| ...|... ..+.+.++.++. .+ .+....+..+ .+
T Consensus 196 ~~~s~~K~~------gp~G~g~l~vr~~~~-~~p-~~~g~~~---~~~~~~gt~~~~-------~~-~al~~al~~~-~~ 255 (382)
T TIGR03403 196 LSFSAHKFH------GPKGVGGLYIRKGVE-LTP-LFHGGEH---MGGRRSGTLNVP-------YI-VAMGEAMRLA-NE 255 (382)
T ss_pred EEEcchhhC------CCCceEEEEECCCCC-CCC-cccCCCC---CCCcccCCcChH-------HH-HHHHHHHHHH-HH
Confidence 999999975 456889999987642 112 1111100 001111222211 11 1122233332 33
Q ss_pred hHHHHHHHHHHHHHHHHHHHhccCCeeeccCCC-ceeeEEEEeccCccccCCCCHHHHHHHHHHCCcccCC---CC-C--
Q 001586 867 GLTEASKIAILNANYMAKRLEKHYPILFRGVNG-TVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPT---MS-W-- 939 (1049)
Q Consensus 867 Gl~~~~~~~~~~a~yL~~~L~~~~~v~~~g~~g-~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~---~~-~-- 939 (1049)
++....++...+++++.++|+++..+.+.++.. ...+.+.+.++ +++..++.+.|.++||.++. ++ +
T Consensus 256 ~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~L~~~gI~v~~g~~c~~~~~ 329 (382)
T TIGR03403 256 YLDFEKSHVRRLRDRLEDALLELPDVFVVGDREHRVPNTILISIK------GVEGEAMLWDLNKAGIAASTGSACASEDL 329 (382)
T ss_pred hHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCCcCCEEEEEeC------CCCHHHHHHhhccCCEEEEchhccCCCCC
Confidence 455566677788899999998753332223211 11122344443 46788899999999999863 11 0
Q ss_pred -----------C---CCCEEEEEccCCCCHHHHHHHHHHHHHHHHHHHHh
Q 001586 940 -----------P---VPGTLMIEPTESESKEELDRYCDALISIREEIAQI 975 (1049)
Q Consensus 940 -----------p---~~~~lri~~t~~~t~eeid~fv~aL~~i~~~i~~i 975 (1049)
+ ..+.+|++++.++|++|||+|+++|++++++++.+
T Consensus 330 ~~~~v~~~~g~~~~~~~~~iR~s~~~~~t~~did~~~~~l~~~~~~~~~~ 379 (382)
T TIGR03403 330 EANPVMVAIGADKELAHTAIRLSLSRFTTEEEIDYTIEVFKKAVQRLRAI 379 (382)
T ss_pred CcCHHHHHcCCChHHhCeeEEEECCCCCCHHHHHHHHHHHHHHHHHHHhh
Confidence 0 12679999999999999999999999998887653
No 73
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.87 E-value=9e-20 Score=211.60 Aligned_cols=305 Identities=16% Similarity=0.161 Sum_probs=204.6
Q ss_pred HHHHHHHHHHHHHhhCCCcc-c-cccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHH----HHHhcCCEE
Q 001586 631 QEMFNNLGEWLCTITGFDSF-S-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA----TAAMCGMKI 704 (1049)
Q Consensus 631 ~~~i~el~~~la~l~G~~~~-~-l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa----~a~~~G~~V 704 (1049)
.+.+.++++++++++|.+.. . +..++++++...+ ++.+. .++++||++...|+++.. .++..|+++
T Consensus 43 ~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~al~~~---~~~~~-----~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~ 114 (376)
T TIGR01977 43 SREVEETRQLLAKLFNAPSSAHVVFTNNATTALNIA---LKGLL-----KEGDHVITTPMEHNSVARPLECLKEQIGVEI 114 (376)
T ss_pred HHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHHH---HHhcc-----CCCCEEEECcchhhHHHHHHHHHHHHcCcEE
Confidence 35677899999999998643 3 3444555555333 33221 256889998877766543 245679999
Q ss_pred EEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-ccccccccHHHHHHHHHHcCCEEEEeccccccccCcCCCCccC
Q 001586 705 VSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIG 783 (1049)
Q Consensus 705 v~V~~d~~g~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~Pg~~G 783 (1049)
+.++.++++.+|+++|+++++ +++++|++++|+ .+|.+. |+++|+++||++|+++++|+++..+...+ ....+|
T Consensus 115 ~~v~~~~~~~~d~~~l~~~~~---~~~~~v~~~~~~n~tG~~~-~~~~i~~l~~~~~~~livD~a~~~g~~~~-~~~~~~ 189 (376)
T TIGR01977 115 TIVKCDNEGLISPERIKRAIK---TNTKLIVVSHASNVTGTIL-PIEEIGELAQENGIFFILDAAQTAGVIPI-DMTELA 189 (376)
T ss_pred EEEecCCCCCcCHHHHHHhcC---CCCeEEEEECCCCCccccC-CHHHHHHHHHHcCCEEEEEhhhccCccCC-CchhcC
Confidence 999998889999999999996 689999999995 599998 79999999999999999999875433222 123579
Q ss_pred CcEEEeCCCcccccCCCCCCCceeEEEEcccc-ccc-CCCCccccC--CCCCC---CCCCCCCCCCCccchhhHHHHHHH
Q 001586 784 ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHL-APF-LPSHPVVST--GGIPA---PEKSQPLGTIAAAPWGSALILPIS 856 (1049)
Q Consensus 784 aDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l-~~~-lpg~~vg~t--~~~~~---~~~~~~t~~i~sa~~g~~~~~~~a 856 (1049)
+|++++++|||++.| +|.|+++++++. .+. ..+...... .+... .+.+.++.+ ...+.+.
T Consensus 190 ~D~~~~s~~K~l~~p-----~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~t~~--------~~~~~a~ 256 (376)
T TIGR01977 190 IDMLAFTGHKGLLGP-----QGTGGLYIREGIKLKPLKSGGTGSHSALIDQPSELPDRFESGTLN--------TPGIAGL 256 (376)
T ss_pred CCEEEecccccccCC-----CCceEEEEcCCcCcCceecCCCccccccccccccchhhccCCCCC--------HHHHHHH
Confidence 999999999999522 367788887653 122 111100000 00000 001111111 1122334
Q ss_pred HHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc--CCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHHHC-Ccc
Q 001586 857 YTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDY-GFH 933 (1049)
Q Consensus 857 ~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~--~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~-Gi~ 933 (1049)
++.++.+...|+..+.++...+++++.++|++. +.+..+.........+.|.++ +.+..++.+.|.++ ||.
T Consensus 257 ~~al~~~~~~g~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~v~~~~~------~~~~~~~~~~L~~~~gi~ 330 (376)
T TIGR01977 257 NAGIKFIEKIGIANIAKKECMLTEKLLNGLREINKVKIYGPADPANRVGVVSFTVE------GIDSEEVADILDEKFDIA 330 (376)
T ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCccccCCeEEEEEC------CCCHHHHHHHHhccCCEE
Confidence 556777777888888888899999999999875 333211001111222344443 45778999999987 888
Q ss_pred cCCCC-C----------CCCCEEEEEccCCCCHHHHHHHHHHHHH
Q 001586 934 GPTMS-W----------PVPGTLMIEPTESESKEELDRYCDALIS 967 (1049)
Q Consensus 934 ~~~~~-~----------p~~~~lri~~t~~~t~eeid~fv~aL~~ 967 (1049)
+..-. + ...+.+|++++..+|.+|||+++++|++
T Consensus 331 v~~g~~~~~~~~~~~g~~~~~~iRis~~~~~t~~dv~~~~~~l~~ 375 (376)
T TIGR01977 331 TRTGLHCAPLAHKTIGTFATGTIRLSLGYFNTEEEIEKLLEALSE 375 (376)
T ss_pred EEcccccchHHHHHhCCCCCCeEEEecCCCCCHHHHHHHHHHHhh
Confidence 64211 0 0247899999999999999999999975
No 74
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.87 E-value=3.8e-20 Score=207.15 Aligned_cols=317 Identities=22% Similarity=0.311 Sum_probs=223.6
Q ss_pred cccccccccccCccccccccccCcccccCCCCCchhhhhcHHHHHHHHHHHHHHhhC-CCccccccCchHHHHHHHHHHH
Q 001586 590 SMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITG-FDSFSLQPNAGAAGEYAGLMVI 668 (1049)
Q Consensus 590 ~~i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~~G~~~~i~el~~~la~l~G-~~~~~l~~~sGa~ge~a~l~ai 668 (1049)
++..||+|.+++..+...+. ..-.+. .+-|.. +...++.+.|+++++ ++. .|+.|||++++|++++.+
T Consensus 52 av~~lGH~hP~iv~al~~Q~-~kl~h~-sn~~~~--------~~~~~la~~L~~~s~~~d~-vff~NSGaEA~EaAiKlA 120 (404)
T COG4992 52 AVNNLGHCHPALVEALKEQA-EKLWHV-SNLFYN--------EPQAELAEKLVELSPFADR-VFFCNSGAEANEAALKLA 120 (404)
T ss_pred eeeccCCCCHHHHHHHHHHH-HHhhhc-ccccCC--------hHHHHHHHHHHhhCccccE-EEEcCCcHHHHHHHHHHH
Confidence 55688999776655555442 111111 222221 223478899999997 655 478999999999999999
Q ss_pred HHHHHhcCCCCCCEEE-EcCCCCCcc---------HHHHHhcC---CEEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEE
Q 001586 669 RAYHKARGDHHRNVCI-IPVSAHGTN---------PATAAMCG---MKIVSVGTDAKGNINIEELRKAAEANRDNLSTLM 735 (1049)
Q Consensus 669 r~y~~~~G~~~r~~VL-ip~saHg~~---------pa~a~~~G---~~Vv~V~~d~~g~iD~~~L~~~i~~~~~~taaV~ 735 (1049)
|.|.. + +++.+|| ...+.||.. |++.+.++ -.++.||+ -|+++++++|+ ++|++|+
T Consensus 121 Rk~~~--~-~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl~~g~~~vpf-----nDi~al~~ai~---~~taAvi 189 (404)
T COG4992 121 RKYTG--D-PEKSKIIAFENSFHGRTLGALSATGQPKYRKGFGPLLPGFRHVPF-----NDIEALEAAID---EDTAAVI 189 (404)
T ss_pred HHHcC--C-CCCcEEEEEcCCcCCccceeeeccCChhhccCCCCCCCCceecCC-----CCHHHHHHHhc---cCeEEEE
Confidence 98853 2 2344566 688999863 44433333 13567777 49999999998 7999999
Q ss_pred EEcC-Cccccccc---cHHHHHHHHHHcCCEEEEeccccccccCcCCCCcc--------CCcEEEeCCCcccccCCCCCC
Q 001586 736 VTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI--------GADVCHLNLHKTFCIPHGGGG 803 (1049)
Q Consensus 736 it~P-n~~G~i~~---di~eI~~lah~~G~ll~vD~A~~~a~~gl~~Pg~~--------GaDi~~~s~hK~f~~P~g~GG 803 (1049)
++.- ...|++.+ .++++.++|++||+++|+|+. |.|+.+.|++ -+||+++ .|.+ |+|
T Consensus 190 vEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEV----QtG~GRTGk~fA~e~~gV~PDI~tl--aK~L----gGG- 258 (404)
T COG4992 190 VEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEV----QTGLGRTGKLFAYEHYGVEPDILTL--AKAL----GGG- 258 (404)
T ss_pred EecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEecc----ccCCCccchHHHHHHhCCCCCEEEe--eccc----cCC-
Confidence 9876 45788753 589999999999999999986 7889999864 4799887 5776 344
Q ss_pred CceeEEEEcccccccC-CCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHH
Q 001586 804 PGMGPIGVKKHLAPFL-PSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYM 882 (1049)
Q Consensus 804 Pg~G~i~~~~~l~~~l-pg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL 882 (1049)
-.+|.+.+++.....+ ||. |+ +++.|+++.++++.+.+..+-.+++.+. +.+...||
T Consensus 259 ~PigA~la~~~~~~~~~~G~----------Hg---------STfGGNpLacAv~~a~l~~l~~e~ll~~---v~~~g~~~ 316 (404)
T COG4992 259 FPIGAMLATEEIASAFTPGD----------HG---------STFGGNPLACAVALAVLEVLLEEGLLEN---VREKGEYL 316 (404)
T ss_pred ccceeeEEchhhhhcCCCCc----------cc---------CCCCcCHHHHHHHHHHHHHHcchhHHHH---HHHHHHHH
Confidence 4556666665444432 221 21 2356788999999999999998887654 44678899
Q ss_pred HHHHhcc---CCee--eccCCCceeeEEEEeccCccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEccCCCCHHH
Q 001586 883 AKRLEKH---YPIL--FRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEE 957 (1049)
Q Consensus 883 ~~~L~~~---~~v~--~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~ee 957 (1049)
.++|+++ +.++ ..|. | .+..+.++.+ ..+.++.+.|.++|+.+.... ++.+|+.|....+++|
T Consensus 317 ~~~L~~l~~~~~~v~~vRG~-G-LmiGiel~~~-------~~a~~~~~~~~~~gvL~~~a~---~~ViR~~PpL~i~~ee 384 (404)
T COG4992 317 LQRLRELKRRYPLVKEVRGR-G-LMIGIELKEP-------YRARDIVRALREEGVLVLPAG---PNVIRFLPPLVITEEE 384 (404)
T ss_pred HHHHHHHhhcCCceeeeecc-e-eEEEEEecCc-------ccHHHHHHHHHHCCeEEecCC---CCeEEecCCccCCHHH
Confidence 9999885 4422 1221 2 3333333311 247899999999999875433 5799999999999999
Q ss_pred HHHHHHHHHHHHHHHH
Q 001586 958 LDRYCDALISIREEIA 973 (1049)
Q Consensus 958 id~fv~aL~~i~~~i~ 973 (1049)
+|..+++|+++++...
T Consensus 385 i~~~~~~l~~~l~~~~ 400 (404)
T COG4992 385 IDEALDALERALAAAS 400 (404)
T ss_pred HHHHHHHHHHHHHHhh
Confidence 9999999999887644
No 75
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.86 E-value=8.9e-20 Score=213.69 Aligned_cols=318 Identities=14% Similarity=0.111 Sum_probs=221.7
Q ss_pred CCCCcHHHHHHHHhCCccccccCCChhhHhhhHHHHHHHHHHHHHHHhCCCCc-ceEeccchHHHHHHHHHHhhhccCCC
Q 001586 177 NTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMS-NASLLDEGTAAAEAMAMCNNIQKGKK 255 (1049)
Q Consensus 177 ~~~~p~~i~~~~~~~~~~~t~ytpyq~e~sqg~le~l~e~q~~ia~L~G~~~~-n~sl~~~~Ta~~eA~~~a~~~~~~~g 255 (1049)
|..+|+.+.+++. ++. ..+. +.+..+.+.+.++.+++++|.+.. .+.+..++|.++++++..+ + ++|
T Consensus 17 P~~~~~~V~~a~~-~~~--~~~~------~~~~~~~~~~~~~~l~~~~g~~~~~~vi~~~~gt~a~~~a~~~~-~--~~G 84 (401)
T PLN02409 17 PVNIPERVLRAMN-RPN--EDHR------SPAFPALTKELLEDVKYIFKTKSGTPFIFPTTGTGAWESALTNT-L--SPG 84 (401)
T ss_pred CCCCCHHHHHHhc-CCC--CCCC------CHHHHHHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHhc-C--CCC
Confidence 4457777764443 322 2221 334566778888999999999763 5667778887777665543 2 389
Q ss_pred CEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCcc--------hhhc-cCC----CEeEEEEEcC-CCCeeeccHHHHHHH
Q 001586 256 KTFIIASNCHPQTIDICITRADGFDIKVVVSDLK--------DIDY-KSG----DVCGVLVQYP-GTEGEVLDYGDFIKN 321 (1049)
Q Consensus 256 ~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~~~--------~l~~-l~~----~t~~V~v~~p-n~~G~i~di~~I~~~ 321 (1049)
|+||+++..|++.. |...++..|++++.++.+ ++++ +++ ++++|+++++ |.+|.+.|+++|+++
T Consensus 85 d~Vlv~~~~~~~~~--~~~~~~~~g~~v~~v~~~~~~~~~~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~~~~~~~i~~l 162 (401)
T PLN02409 85 DKVVSFRIGQFSLL--WIDQMQRLNFDVDVVESPWGQGADLDILKSKLRQDTNHKIKAVCVVHNETSTGVTNDLAGVRKL 162 (401)
T ss_pred CEEEEeCCCchhHH--HHHHHHHcCCceEEEECCCCCCCCHHHHHHHHhhCcCCCccEEEEEeecccccccCCHHHHHHH
Confidence 99999999888754 334456678888887542 3444 543 7899998875 899999999999999
Q ss_pred --HHhCCcEEEEEeccccccCCC-CCCcccceEEEecC-ccccccCCCCCCceEEEEEchhHHhcCCCceeeeeecCCCC
Q 001586 322 --AHANGVKVVMATDLLALTILK-PPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGK 397 (1049)
Q Consensus 322 --ah~~galliV~a~~~alg~l~-~p~~~GaDivvgs~-k~lg~P~~~GGP~~G~l~~~~~l~~~lpgrivG~s~d~~g~ 397 (1049)
||++|++++|++ ..++|.+. +..+||+|++++++ |+|++| |++||+++++++.+++.....
T Consensus 163 ~~~~~~g~~~vvD~-v~s~g~~~id~~~~~~D~~~~s~~K~l~~P-----~G~G~l~~~~~~~~~~~~~~~--------- 227 (401)
T PLN02409 163 LDCAQHPALLLVDG-VSSIGALDFRMDEWGVDVALTGSQKALSLP-----TGLGIVCASPKALEASKTAKS--------- 227 (401)
T ss_pred HhhhccCcEEEEEc-ccccCCccccccccCccEEEEcCccccCcC-----CCcceeEECHHHHHHHhcCCC---------
Confidence 999999999943 34555442 45789999999999 667554 468999999988776632100
Q ss_pred cceeeecccccc--cc-cccccCCCccchhHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEcCC--
Q 001586 398 PALRVAMQTREQ--HI-RRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL-- 472 (1049)
Q Consensus 398 ~~~~l~lqtreq--~i-rrekaTsni~t~~~l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~g~~~v~~~-- 472 (1049)
..+.+.+..... .. .+...|+|+ ..++++.+++ .++..+|++++.++..++++++++.|+++| ++++.+
T Consensus 228 ~~~~~~~~~~~~~~~~g~~~~~Tp~~---~~~~al~~al--~~~~~~G~e~i~~~~~~l~~~l~~~L~~~g-~~~~~~~~ 301 (401)
T PLN02409 228 PRVFFDWADYLKFYKLGTYWPYTPSI---QLLYGLRAAL--DLIFEEGLENVIARHARLGEATRLAVEAWG-LKLCTKKP 301 (401)
T ss_pred CCeecCHHHHHHHHhcCCCCCCCccH---HHHHHHHHHH--HHHHHhhHHHHHHHHHHHHHHHHHHHHHcC-CeeccCCh
Confidence 001111100000 00 111235555 5677777776 566678999999999999999999999887 888743
Q ss_pred C-CcceE-EEecCC---HHHHHHHHH-HcCCeeee----ecCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001586 473 P-FFDTV-KVKCAD---AHAIASAAY-KIEMNLRV----VDSNTVTASFDETTTLEDVDKLFIVFAG 529 (1049)
Q Consensus 473 ~-~~~~v-~i~~~~---~~~v~~~L~-~~gI~~~~----~~~~~vris~~~~~t~edid~lv~aL~~ 529 (1049)
. ...++ ++..+. +.++.+.|. ++||.+.. +.+..+|++.+-++|.+||.+++++|+.
T Consensus 302 ~~~s~~v~~~~~p~~~~~~~l~~~l~~~~~i~i~~G~~~~~~~~~Rig~~g~~~~~~~~~~~~~~~~ 368 (401)
T PLN02409 302 EWRSDTVTAVVVPEGIDSAEIVKNAWKKYNLSLGLGLNKVAGKVFRIGHLGNVNELQLLGALAGVEM 368 (401)
T ss_pred hhcccceEEEeCCCCCCHHHHHHHHHHhCCEEEEcCCCcccCCEEEEcCCCCCCHHHHHHHHHHHHH
Confidence 1 23333 355543 678888876 56998753 2357899999999999999999999974
No 76
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.86 E-value=8.5e-20 Score=212.15 Aligned_cols=296 Identities=13% Similarity=0.036 Sum_probs=207.2
Q ss_pred HHHHHHHHHHHHHHhCCCC-cceEecc-chHHHHHHHHHHhhhccCCCCEEEEcCCCCHHHHHHHHHhhcCCCe-EEEEe
Q 001586 210 LESLLNFQTMIADLTGLPM-SNASLLD-EGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDI-KVVVS 286 (1049)
Q Consensus 210 le~l~e~q~~ia~L~G~~~-~n~sl~~-~~Ta~~eA~~~a~~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi-~v~~v 286 (1049)
.+.+.+.++.+++|+|++. .++.++. +||.+++++..++ +. ++++.|+ ...+|++....+ .++..|+ +++.+
T Consensus 47 ~~~~~~~r~~l~~l~~~~~~~~v~~~~gs~T~~~~~~~~~l-~~-~~~~~vi-~~g~f~~~~~~~--~~~~~g~~~v~~~ 121 (378)
T PRK03080 47 KALLKRVIEGTRELLSLPEGYEVGIVPGSDTGAWEMALWSL-LG-ARRVDHL-AWESFGSKWATD--VVKQLKLEDPRVL 121 (378)
T ss_pred HHHHHHHHHHHHHHhCCCCCceEEEECCchHHHHHHHHHhc-CC-CCcceEE-EeCHHHHHHHHH--HHhhcCCCCceEe
Confidence 4678889999999999854 4688886 8999999887765 22 1234444 468999854431 1245677 77776
Q ss_pred Ccc-----hhhccCCCEeEEEEEc-CCCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCC-CCCcccceEEEecC-cc
Q 001586 287 DLK-----DIDYKSGDVCGVLVQY-PGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVVGSA-QR 358 (1049)
Q Consensus 287 ~~~-----~l~~l~~~t~~V~v~~-pn~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~-~p~~~GaDivvgs~-k~ 358 (1049)
+.+ ++++++. ++.|.+++ .|.+|.+.|+++|++ |++|++++|++ ..++|..+ +..+ +|++++++ |+
T Consensus 122 ~~~~g~~~d~~~i~~-~~~V~~~h~~t~tG~~~pi~~I~~--~~~g~~~vVDa-~qs~G~~pidv~~--iD~~~~s~~K~ 195 (378)
T PRK03080 122 EADYGSLPDLSAVDF-DRDVVFTWNGTTTGVRVPVARWIG--ADREGLTICDA-TSAAFALPLDWSK--LDVYTFSWQKV 195 (378)
T ss_pred ccCCCCCCCHhhcCC-CCCEEEEecCCccceeccchhhcc--ccCCCeEEEec-ccccccCCCCHHH--CcEEEEehhhh
Confidence 643 2233433 55677766 689999999999999 89999999943 34565543 2333 79999999 54
Q ss_pred ccccCCCCCCceEEEEEchhHHhcCCCceeeeeecCCCCcceeeeccc--ccccccccccCCCccchhHHHHHHHHHHHH
Q 001586 359 FGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQT--REQHIRRDKATSNICTAQALLANMAAMYAV 436 (1049)
Q Consensus 359 lg~P~~~GGP~~G~l~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqt--req~irrekaTsni~t~~~l~a~~aa~y~~ 436 (1049)
|++| ||+||+++++++.+++.+...|+.. + +.+++.. .....+++.+|.|.....+++++.+++ .
T Consensus 196 l~~P-----~G~g~l~v~~~~~~~~~p~~~~~~~-----~-~~~~~~~~~~~~~~~~~~~t~~tp~i~~i~~l~~al--~ 262 (378)
T PRK03080 196 LGGE-----GGHGMAILSPRAVERLESYTPARPI-----P-KFFRLTKGGKAIENSFKGQTINTPSMLTVEDYLDQL--D 262 (378)
T ss_pred CCCC-----CceEEEEECHHHHHhhhcccCCCCC-----c-hhheeccchHHhhhhhcCCcccCchHHHHHHHHHHH--H
Confidence 5444 5799999999999888776666421 1 1122211 111124566777766557777777776 6
Q ss_pred HhCcc-hHHHHHHHHHHHHHHHHHHhhcCCCeEEcCC-C--Cc-ceEEEecCC-----HHHHHHHHHHcCCeeee--e--
Q 001586 437 YHGPE-GLKTIAQRVHGLAGTFALGLKKLGTVEVQGL-P--FF-DTVKVKCAD-----AHAIASAAYKIEMNLRV--V-- 502 (1049)
Q Consensus 437 ~~g~~-Gl~~ia~~~~~~a~~l~~~L~~~g~~~v~~~-~--~~-~~v~i~~~~-----~~~v~~~L~~~gI~~~~--~-- 502 (1049)
++..+ |++++.+|+.+++++++++|+++++++++.. + .. ..++|.+++ ..++..+|.++||.++. .
T Consensus 263 ~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~i~~~~~~~~~~~~~~~~~~~l~~~~i~v~~g~~~~ 342 (378)
T PRK03080 263 WANSIGGLDALIARTAANASVLYDWAEKTPWATPLVADPATRSNTSVTLDFVDAQAAVDAAAVAKLLRENGAVDIEPYRD 342 (378)
T ss_pred HHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccCccEEEEEcCCchHHHHHHHHHHHHHcCCeeccccccC
Confidence 66676 8999999999999999999999875677631 1 22 246666654 34567777777887643 1
Q ss_pred cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001586 503 DSNTVTASFDETTTLEDVDKLFIVFAG 529 (1049)
Q Consensus 503 ~~~~vris~~~~~t~edid~lv~aL~~ 529 (1049)
..+.+|+|++.+||.+|||+|+++|+.
T Consensus 343 ~~~~vRis~~~~~t~~di~~l~~al~~ 369 (378)
T PRK03080 343 APNGLRIWCGPTVEPADVEALTPWLDW 369 (378)
T ss_pred CCCcEEEecCCCCCHHHHHHHHHHHHH
Confidence 247899999999999999999999964
No 77
>PRK02769 histidine decarboxylase; Provisional
Probab=99.86 E-value=1.6e-19 Score=208.73 Aligned_cols=281 Identities=17% Similarity=0.130 Sum_probs=199.1
Q ss_pred hhHHHHHHHHHHHHHHHhCCCCcc--eEeccchHHHHHHHHHHhhhc--cCCCCEEEEcCCCCHHHHHHHHHhhcCCCeE
Q 001586 207 QGRLESLLNFQTMIADLTGLPMSN--ASLLDEGTAAAEAMAMCNNIQ--KGKKKTFIIASNCHPQTIDICITRADGFDIK 282 (1049)
Q Consensus 207 qg~le~l~e~q~~ia~L~G~~~~n--~sl~~~~Ta~~eA~~~a~~~~--~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~ 282 (1049)
+++.+...+...++|+|+|++... ..+++|||. +.++++... +.++++|++++.+|+++.+.++.+ |++
T Consensus 61 ~~~~~~e~~~~~~~a~l~g~~~~~~~G~~TsGgTe---an~~a~~~ar~~~~~~~ii~s~~~H~Sv~ka~~~l----g~~ 133 (380)
T PRK02769 61 LNSFDFERDVMNFFAELFKIPFNESWGYITNGGTE---GNLYGCYLARELFPDGTLYYSKDTHYSVSKIARLL----RIK 133 (380)
T ss_pred CChHHHHHHHHHHHHHHhCCCCCCCCEEEecChHH---HHHHHHHHHHHhCCCcEEEeCCCceehHHHHHHHc----CCC
Confidence 346677888999999999997654 478888884 444443211 136789999999999999988653 333
Q ss_pred EEEeC--------cchhhc-cCCC---EeEEEEEcC-CCCeeeccHHHHHHHHHhCC---cEEEEEeccccccCCC----
Q 001586 283 VVVSD--------LKDIDY-KSGD---VCGVLVQYP-GTEGEVLDYGDFIKNAHANG---VKVVMATDLLALTILK---- 342 (1049)
Q Consensus 283 v~~v~--------~~~l~~-l~~~---t~~V~v~~p-n~~G~i~di~~I~~~ah~~g---alliV~a~~~alg~l~---- 342 (1049)
.+.++ +++|++ ++++ |++|+++++ |.+|.++|+++|+++||++| ++++|++ .++.+.+.
T Consensus 134 ~~~V~~~~~g~id~~~L~~~i~~~~~~t~lvv~t~gtt~tG~idpi~~I~~i~~~~g~~~~~lHVDa-A~gg~~~p~~~~ 212 (380)
T PRK02769 134 SRVITSLPNGEIDYDDLISKIKENKNQPPIIFANIGTTMTGAIDNIKEIQEILKKIGIDDYYIHADA-ALSGMILPFVNN 212 (380)
T ss_pred CceeccCCCCcCcHHHHHHHHHhCCCCcEEEEEEeCCCCCcccCCHHHHHHHHHHhCCCceEEEEEe-cccceeecccCc
Confidence 33333 345655 6555 889999986 68999999999999999998 6999954 22333221
Q ss_pred ---CCCcccceEEEecCccc-cccCCCCCCceEEEEEchhHHhcCCCceeeeeecCCCCcceeeecccccccccccccCC
Q 001586 343 ---PPGELGADIVVGSAQRF-GVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATS 418 (1049)
Q Consensus 343 ---~p~~~GaDivvgs~k~l-g~P~~~GGP~~G~l~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irrekaTs 418 (1049)
-....|+|.++.+++|| ++|.| +|++++++++.+.+... +. |.- ..+. ...||.
T Consensus 213 ~~~~d~~~~vDsis~s~HK~~~~P~g-----~G~l~~r~~~~~~~~~~-~~----------yl~---~~d~---t~~GSR 270 (380)
T PRK02769 213 PPPFSFADGIDSIAISGHKFIGSPMP-----CGIVLAKKKYVERISVD-VD----------YIG---SRDQ---TISGSR 270 (380)
T ss_pred cccCCccCCCCEEEECCcccCCCCCC-----cEEEEEehhhhhhcccC-cc----------ccC---CCCC---CccCCC
Confidence 11223999999999555 44653 77899998877766421 00 110 0000 124666
Q ss_pred CccchhHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEcCCCCcceEEEecCCHHHHHHHHHHcCCe
Q 001586 419 NICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMN 498 (1049)
Q Consensus 419 ni~t~~~l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~g~~~v~~~~~~~~v~i~~~~~~~v~~~L~~~gI~ 498 (1049)
|..+ .+++.++ +.++|.+|++++.+++.++++|+.++|++.| ++++..|...+|+|..+.. ++ .+|+.
T Consensus 271 ~g~~---~l~lw~a--L~~lg~~G~~~~~~~~~~la~~l~~~L~~~g-~~~~~~p~~~~v~f~~~~~-~~-----~~~w~ 338 (380)
T PRK02769 271 NGHT---ALLLWAA--IRSLGSKGLRQRVQHCLDMAQYAVDRLQANG-IPAWRNPNSITVVFPCPSE-RI-----WKKWH 338 (380)
T ss_pred CcHH---HHHHHHH--HHHHCHHHHHHHHHHHHHHHHHHHHHHHhCC-CEEEcCCCceEEEEcCCCH-HH-----HhCee
Confidence 6532 3333344 4889999999999999999999999999887 9988767777888876542 22 16787
Q ss_pred eeeecCCeEEEEeccCCCHHHHHHHHHHHhCC
Q 001586 499 LRVVDSNTVTASFDETTTLEDVDKLFIVFAGG 530 (1049)
Q Consensus 499 ~~~~~~~~vris~~~~~t~edid~lv~aL~~~ 530 (1049)
+... .+.++++++..+|+|.||+|++.|...
T Consensus 339 l~~~-~~~~hi~~~~~~~~~~~~~f~~dl~~~ 369 (380)
T PRK02769 339 LATS-GNQAHIITMPHHNKQQIDSLIDELIFD 369 (380)
T ss_pred Eccc-CCEEEEEECCCCCHHHHHHHHHHHHHH
Confidence 7654 458999999999999999999999743
No 78
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.86 E-value=1.3e-19 Score=212.67 Aligned_cols=295 Identities=15% Similarity=0.165 Sum_probs=190.8
Q ss_pred HhhCCCccc-cccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHH----HHHhcCCEE----EEEcCCCCC
Q 001586 643 TITGFDSFS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA----TAAMCGMKI----VSVGTDAKG 713 (1049)
Q Consensus 643 ~l~G~~~~~-l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa----~a~~~G~~V----v~V~~d~~g 713 (1049)
+++|.+... ++..+++++...++ +.+. .++ .++++|+++...|+++.. .++..|+++ +.++.+++|
T Consensus 80 ~l~g~~~~~v~~~~~~t~~l~~~~---~~~~-~~~-~~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~g 154 (406)
T TIGR01814 80 RLVGAKEDEVVVMNTLTINLHLLL---ASFY-KPT-PKRYKILLEAKAFPSDHYAIESQLQLHGLTVEESMVQIEPREEE 154 (406)
T ss_pred cccCCCCCcEEEeCCchHHHHHHH---HHhc-CCc-CCccEEEecCCCCChHHHHHHHHHHhcCCCcccceEEeccCCCC
Confidence 789987643 33444554443333 3221 122 123467887777776433 245678887 567776678
Q ss_pred CCCHHHHHHHHHhcCCCeEEEEEEcCCc-cccccccHHHHHHHHHHcCCEEEEeccccccccCcCCCCccCCcEEEeCCC
Q 001586 714 NINIEELRKAAEANRDNLSTLMVTYPST-HGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHLNLH 792 (1049)
Q Consensus 714 ~iD~~~L~~~i~~~~~~taaV~it~Pn~-~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~Pg~~GaDi~~~s~h 792 (1049)
.+|++++++.+++.+++|++|+++++++ +|.+. |+++|+++||++|++++||++|..+...+ ...++|+|++++++|
T Consensus 155 ~~~~~~l~~~~~~~~~~t~lv~~~~v~~~tG~~~-~~~~i~~~~~~~g~~~~vD~aq~~G~~~i-d~~~~gvD~~~~s~h 232 (406)
T TIGR01814 155 TLRLEDILDTIEKNGDDIAVILLSGVQYYTGQLF-DMAAITRAAHAKGALVGFDLAHAVGNVPL-DLHDWGVDFACWCTY 232 (406)
T ss_pred ccCHHHHHHHHHhcCCCeEEEEEeccccccceec-CHHHHHHHHHHcCCEEEEEcccccCCccc-ccccCCCCEEEEcCc
Confidence 9999999999876557899999999965 89998 79999999999999999999987554443 335789999999999
Q ss_pred cccccCCCCCCCceeEEEEcc-cccccCCCCccccCCCC------------CC-CCCCCCCCCCCccchhhHHHHHHHHH
Q 001586 793 KTFCIPHGGGGPGMGPIGVKK-HLAPFLPSHPVVSTGGI------------PA-PEKSQPLGTIAAAPWGSALILPISYT 858 (1049)
Q Consensus 793 K~f~~P~g~GGPg~G~i~~~~-~l~~~lpg~~vg~t~~~------------~~-~~~~~~t~~i~sa~~g~~~~~~~a~a 858 (1049)
||++ |||| |.+++.+ .+....|. ..|+.... .+ .+.+.+|.++ ..+....+
T Consensus 233 K~l~-----g~pG-~~l~v~~~~~~~~~p~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~--------~~~~~l~~ 297 (406)
T TIGR01814 233 KYLN-----AGPG-AGAFVHEKHAHTERPR-LAGWWGHARPTRFKMDNTLGLIPCGFRISNPPI--------LSVAALRG 297 (406)
T ss_pred cccC-----CCCC-eEEEEehhhhhhcCCC-CCcccCCCCccccccccccCCCccceeeCCccH--------HHHHHHHH
Confidence 9984 6687 5565543 32222221 11211000 00 0011112221 12223344
Q ss_pred HHHHHchhhHHHHHHHHHHHHHHHHHHHhccCC----eeeccCCCc--eeeEEEEeccCccccCCCCHHHHHHHHHHCCc
Q 001586 859 YIAMMGSKGLTEASKIAILNANYMAKRLEKHYP----ILFRGVNGT--VAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGF 932 (1049)
Q Consensus 859 ~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~~~----v~~~g~~g~--~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi 932 (1049)
.+..+...|+.++.++...+++++.+.|+++.. +...++..+ ....+.|.++ ++..++.++|.++||
T Consensus 298 al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~i~~~~~~~~r~~~v~~~~~-------~~~~~~~~~L~~~gi 370 (406)
T TIGR01814 298 SLDIFDQAGMEALRKKSLLLTDYLEELIKARCGGPPVLTIITPRDHAQRGCQLSLTHP-------VPGKAVFQALIKRGV 370 (406)
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCceEEeCCCChhhcCCeEEEEec-------CCHHHHHHHHHHCCE
Confidence 556665667888888888999999999976421 211122111 1122344432 356889999999999
Q ss_pred ccCCCCCCCCCEEEEEc-cCCCCHHHHHHHHHHHHHHH
Q 001586 933 HGPTMSWPVPGTLMIEP-TESESKEELDRYCDALISIR 969 (1049)
Q Consensus 933 ~~~~~~~p~~~~lri~~-t~~~t~eeid~fv~aL~~i~ 969 (1049)
.+... .++.+|+++ +.++|++|||+++++|++++
T Consensus 371 ~v~~~---~~~~iRiS~~~~~nt~~did~l~~~l~~~~ 405 (406)
T TIGR01814 371 IGDKR---EPSVIRVAPVPLYNTFVDVYDAVNVLEEIL 405 (406)
T ss_pred EEecc---CCCeEEEechhccCCHHHHHHHHHHHHHHh
Confidence 86421 247899999 57999999999999998764
No 79
>PLN02271 serine hydroxymethyltransferase
Probab=99.86 E-value=1.3e-19 Score=211.76 Aligned_cols=313 Identities=16% Similarity=0.134 Sum_probs=213.5
Q ss_pred HHHHHHHHHHHHHhhCCCc----cccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHH---------H
Q 001586 631 QEMFNNLGEWLCTITGFDS----FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT---------A 697 (1049)
Q Consensus 631 ~~~i~el~~~la~l~G~~~----~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~---------a 697 (1049)
.+++.-.++...+++|.+. +++++.||+.|+.++++++. .++|+|+..+..||.|... +
T Consensus 193 D~iE~la~era~~lF~~~~~~~gaNVQp~SGs~AN~aV~~ALl--------~PGD~IL~ldl~~GGHlshg~~~~~g~~v 264 (586)
T PLN02271 193 DQIERLCCERALAAFGLDSEKWGVNVQPYSCTSANFAVYTGLL--------LPGDRIMGLDSPSGGHMSHGYYTPGGKKV 264 (586)
T ss_pred HHHHHHHHHHHHHHhCCcccccccceeeccHHHHHHHHHHHhc--------CCCCEEEEecCCCCCchhccccccccccc
Confidence 3455556678889999887 78999999999987777653 3678999878888877543 2
Q ss_pred HhcCCEEEEEc--CC-CCCCCCHHHHHHHHHhcCCCeEEEEEEcCCccccccccHHHHHHHHHHcCCEEEEecccccccc
Q 001586 698 AMCGMKIVSVG--TD-AKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQV 774 (1049)
Q Consensus 698 ~~~G~~Vv~V~--~d-~~g~iD~~~L~~~i~~~~~~taaV~it~Pn~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~ 774 (1049)
...|+.+..++ +| ++|.+|+++|++.+.+ .++++|++....+.- .- |+++|+++|+++|++++||+||..++.
T Consensus 265 s~sG~~~~~vpY~~d~~~g~IDyd~lek~a~~--~rPKLII~g~Saypr-~~-D~~~i~eIAdevGA~LmvD~AH~aGLI 340 (586)
T PLN02271 265 SGASIFFESLPYKVNPQTGYIDYDKLEEKALD--FRPKILICGGSSYPR-EW-DYARFRQIADKCGAVLMCDMAHISGLV 340 (586)
T ss_pred ccccceEEEEEcccccccCccCHHHHHHHhhh--cCCeEEEECchhccC-cC-CHHHHHHHHHHcCCEEEEECccccccc
Confidence 34565544444 64 4699999999995542 788888886654442 22 799999999999999999999976665
Q ss_pred CcC---CCCccCCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCC----CCCC-CCCCCccc
Q 001586 775 GLT---SPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPE----KSQP-LGTIAAAP 846 (1049)
Q Consensus 775 gl~---~Pg~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~----~~~~-t~~i~sa~ 846 (1049)
... .|.. ++|++++++|||| .||..|+|++++...+...|...++..+..++. ..++ .+...+.+
T Consensus 341 a~g~~~sP~~-~aDvvt~TTHKtL------rGPrGG~I~~r~~~~~~~~g~~gs~s~~~~~~d~~~kI~~aVfPglqgGp 413 (586)
T PLN02271 341 AAKECVNPFD-YCDIVTSTTHKSL------RGPRGGIIFYRKGPKLRKQGMLLSHGDDNSHYDFEEKINFAVFPSLQGGP 413 (586)
T ss_pred ccCcCCCCCc-CCcEEEeCCcccC------CCCCceEEEecccccccccCCccccccccccHHHHHHhhcccCCccccCh
Confidence 332 3544 6999999999999 478668999987666555444333321100000 0011 12222222
Q ss_pred hhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeEEEEeccCccccCCCCHHHHHH
Q 001586 847 WGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAK 925 (1049)
Q Consensus 847 ~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~-~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k 925 (1049)
.... +++.+.+ ++......+++.++++++||+.|++.|.+. ++++..| ...|.+++|++++ |++...+.+
T Consensus 414 hn~~-IAalAva-lkea~~~efk~Ya~QVv~NAkaLA~~L~~~G~~vv~gg---TdnHlvLvDl~~~----g~~G~~ae~ 484 (586)
T PLN02271 414 HNNH-IAALAIA-LKQVATPEYKAYMQQVKKNAQALASALLRRKCRLVTGG---TDNHLLLWDLTTL----GLTGKNYEK 484 (586)
T ss_pred hHHH-HHHHHHH-HHHHhChHHHHHHHHHHHHHHHHHHHHHHCCCeEeeCC---CCcceeeecCccc----CCCHHHHHH
Confidence 2222 3333333 343334456889999999999999999875 8887533 3457789998753 567888889
Q ss_pred HHHHCCcccCC--CCC---C-CCCEEEEEccCCC----CHHHHHHHHHHHHHHHHH
Q 001586 926 RLMDYGFHGPT--MSW---P-VPGTLMIEPTESE----SKEELDRYCDALISIREE 971 (1049)
Q Consensus 926 ~L~~~Gi~~~~--~~~---p-~~~~lri~~t~~~----t~eeid~fv~aL~~i~~~ 971 (1049)
.|.+-||.++. +.+ | .++.+||...+.+ .++|+++..+.|.++++.
T Consensus 485 ~Le~~~I~~Nkn~iP~d~~~~~psGiRiGT~alT~rG~~e~d~~~iA~~i~~~~~~ 540 (586)
T PLN02271 485 VCEMCHITLNKTAIFGDNGTISPGGVRIGTPAMTSRGCLESDFETIADFLLRAAQI 540 (586)
T ss_pred HHHHcCeEeccccCCCCCCCCCCCcccccCHHHHhcCCCcHHHHHHHHHHHHHHhh
Confidence 99999998753 222 1 3567888876643 457888888877777663
No 80
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.86 E-value=1.4e-19 Score=208.38 Aligned_cols=295 Identities=16% Similarity=0.098 Sum_probs=206.4
Q ss_pred hHHHHHHHHHHHHHHHhCCCCc-ceEeccchHHHHHHHHHHhhhccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEe
Q 001586 208 GRLESLLNFQTMIADLTGLPMS-NASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVS 286 (1049)
Q Consensus 208 g~le~l~e~q~~ia~L~G~~~~-n~sl~~~~Ta~~eA~~~a~~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v 286 (1049)
+..+.+.++++.+++++|.+.. .+.++.++|.+...++.++ . ++|++||++...|++.. +...++..|.+++++
T Consensus 29 ~~~~~~~~~~~~la~~~g~~~~~~~~~~~~~t~al~~~~~~~-~--~~g~~vl~~~~~~~~~~--~~~~~~~~g~~~~~v 103 (356)
T cd06451 29 EFLALMDEILEGLRYVFQTENGLTFLLSGSGTGAMEAALSNL-L--EPGDKVLVGVNGVFGDR--WADMAERYGADVDVV 103 (356)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHHHHHHHh-C--CCCCEEEEecCCchhHH--HHHHHHHhCCCeEEe
Confidence 3456678889999999999654 4567777787665555444 2 37899999988887632 122234467777776
Q ss_pred Cc--------chhhc-cCC-CEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCC-CCCCcccceEEEe
Q 001586 287 DL--------KDIDY-KSG-DVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTIL-KPPGELGADIVVG 354 (1049)
Q Consensus 287 ~~--------~~l~~-l~~-~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l-~~p~~~GaDivvg 354 (1049)
+. +++++ +++ ++++|++++| |.+|.+.|+++|+++||++|+++++++ ..++|.. .+..++|+|++++
T Consensus 104 ~~~~~~~~~~~~l~~~i~~~~~~~v~i~~~~~~~G~~~~~~~i~~~a~~~~~~li~D~-~~~~g~~~~~~~~~~~d~~~~ 182 (356)
T cd06451 104 EKPWGEAVSPEEIAEALEQHDIKAVTLTHNETSTGVLNPLEGIGALAKKHDALLIVDA-VSSLGGEPFRMDEWGVDVAYT 182 (356)
T ss_pred ecCCCCCCCHHHHHHHHhccCCCEEEEeccCCCcccccCHHHHHHHHHhcCCEEEEee-ehhccCccccccccCccEEEe
Confidence 54 34555 666 8999999887 789999999999999999999999943 3455543 3456789999999
Q ss_pred cC-ccccccCCCCCCceEEEEEchhHHhcCCC--ceeeeeecCCCCcceeeeccccccc--cc-ccccCCCccchhHHHH
Q 001586 355 SA-QRFGVPMGYGGPHAAFLATSQEYKRMMPG--RIVGVSIDSSGKPALRVAMQTREQH--IR-RDKATSNICTAQALLA 428 (1049)
Q Consensus 355 s~-k~lg~P~~~GGP~~G~l~~~~~l~~~lpg--rivG~s~d~~g~~~~~l~lqtreq~--ir-rekaTsni~t~~~l~a 428 (1049)
++ |+|++| ++.|++++++++.+.+.. ...+ +.+.++...+. .+ .+.+|.|+ ..+++
T Consensus 183 s~~K~l~~p-----~g~G~l~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~t~~~---~~~~a 244 (356)
T cd06451 183 GSQKALGAP-----PGLGPIAFSERALERIKKKTKPKG----------FYFDLLLLLKYWGEGYSYPHTPPV---NLLYA 244 (356)
T ss_pred cCchhccCC-----CCcceeEECHHHHHHHHhcCCCCc----------eeecHHHHHhhhcccCCCCCCChH---HHHHH
Confidence 98 777655 357899999988776641 1111 11221111111 11 12333333 44556
Q ss_pred HHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEcCC--CCcceE-EEecC-C--HHHHHHHHHHc-CCeeee
Q 001586 429 NMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL--PFFDTV-KVKCA-D--AHAIASAAYKI-EMNLRV 501 (1049)
Q Consensus 429 ~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~g~~~v~~~--~~~~~v-~i~~~-~--~~~v~~~L~~~-gI~~~~ 501 (1049)
+.+++ .++..+|++++.++..++++++++.|.++| +++..+ .+...+ .+..+ + ..+++++|.++ ||.+..
T Consensus 245 ~~aal--~~l~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~gI~~~~ 321 (356)
T cd06451 245 LREAL--DLILEEGLENRWARHRRLAKALREGLEALG-LKLLAKPELRSPTVTAVLVPEGVDGDEVVRRLMKRYNIEIAG 321 (356)
T ss_pred HHHHH--HHHHHhhHHHHHHHHHHHHHHHHHHHHHcC-CeeccCcccCCCceEEEECCCCCCHHHHHHHHHHhCCEEEec
Confidence 66665 556667899999999999999999999887 888642 223333 23443 2 67899999998 998754
Q ss_pred e----cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001586 502 V----DSNTVTASFDETTTLEDVDKLFIVFAG 529 (1049)
Q Consensus 502 ~----~~~~vris~~~~~t~edid~lv~aL~~ 529 (1049)
. .++.+|+|++.++|+|||++++++|..
T Consensus 322 g~~~~~~~~iRis~~~~~~~e~v~~~~~~l~~ 353 (356)
T cd06451 322 GLGPTAGKVFRIGHMGEATREDVLGVLSALEE 353 (356)
T ss_pred ccccccCCEEEEecCCCCCHHHHHHHHHHHHH
Confidence 2 246899999999999999999999963
No 81
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.85 E-value=2.2e-19 Score=203.14 Aligned_cols=320 Identities=18% Similarity=0.231 Sum_probs=231.6
Q ss_pred CCCCcHHHHHHHHhCCccccccCCChhhHhhhHHHHHHHHHHHHHHHhCCCCcc-eEeccchHHHHHHHHHHhhhccCCC
Q 001586 177 NTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSN-ASLLDEGTAAAEAMAMCNNIQKGKK 255 (1049)
Q Consensus 177 ~~~~p~~i~~~~~~~~~~~t~ytpyq~e~sqg~le~l~e~q~~ia~L~G~~~~n-~sl~~~~Ta~~eA~~~a~~~~~~~g 255 (1049)
|.-+|+.|.+.+. ++- .. -+.|+ -.+.+.+.++.+-.+++.+-.. +.+..+||+++||++-++- . +|
T Consensus 13 P~~v~~~V~~am~-~~~-~~---h~s~~----F~~~~~~~~~~L~~v~~t~~~~~~ll~gsGt~amEAav~sl~-~--pg 80 (383)
T COG0075 13 PVPVPPRVLLAMA-RPM-VG---HRSPD----FVGIMKEVLEKLRKVFGTENGDVVLLSGSGTLAMEAAVASLV-E--PG 80 (383)
T ss_pred CCCCCHHHHHHhc-CCC-CC---CCCHH----HHHHHHHHHHHHHHHhcCCCCcEEEEcCCcHHHHHHHHHhcc-C--CC
Confidence 3458888875444 332 11 12333 2345566677888899987433 4455899999999876542 2 78
Q ss_pred CEEEEcC-CCCHHHHHHHHHhhcCCCeEEEEeCc--------chhhc-cC--CCEeEEEEEcC-CCCeeeccHHHHHHHH
Q 001586 256 KTFIIAS-NCHPQTIDICITRADGFDIKVVVSDL--------KDIDY-KS--GDVCGVLVQYP-GTEGEVLDYGDFIKNA 322 (1049)
Q Consensus 256 ~~Vlv~~-~~Hps~~~~l~~~a~~~gi~v~~v~~--------~~l~~-l~--~~t~~V~v~~p-n~~G~i~di~~I~~~a 322 (1049)
||||+.. ..|..-..-+ ++.+|.+++.++. +++++ ++ ++.+.|.++|. +++|.++|+++|+++|
T Consensus 81 dkVLv~~nG~FG~R~~~i---a~~~g~~v~~~~~~wg~~v~p~~v~~~L~~~~~~~~V~~vH~ETSTGvlnpl~~I~~~~ 157 (383)
T COG0075 81 DKVLVVVNGKFGERFAEI---AERYGAEVVVLEVEWGEAVDPEEVEEALDKDPDIKAVAVVHNETSTGVLNPLKEIAKAA 157 (383)
T ss_pred CeEEEEeCChHHHHHHHH---HHHhCCceEEEeCCCCCCCCHHHHHHHHhcCCCccEEEEEeccCcccccCcHHHHHHHH
Confidence 9988555 7886655444 5567887777654 46665 54 67888988775 8999999999999999
Q ss_pred HhCCcEEEEEeccccccCC-CCCCcccceEEEecC-ccccccCCCCCCceEEEEEchhHHhcCCCceeeeeecCCCCcce
Q 001586 323 HANGVKVVMATDLLALTIL-KPPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPAL 400 (1049)
Q Consensus 323 h~~galliV~a~~~alg~l-~~p~~~GaDivvgs~-k~lg~P~~~GGP~~G~l~~~~~l~~~lpgrivG~s~d~~g~~~~ 400 (1049)
+++|++++|++ ..|+|.. .++.+||+|+++.++ |.|+.| ||+|+++++++..+.+..+ -.++|
T Consensus 158 k~~g~l~iVDa-VsS~Gg~~~~vd~wgiDv~itgSQK~l~~P-----PGla~v~~S~~a~e~~~~~---------~~~~~ 222 (383)
T COG0075 158 KEHGALLIVDA-VSSLGGEPLKVDEWGIDVAITGSQKALGAP-----PGLAFVAVSERALEAIEER---------KHPSF 222 (383)
T ss_pred HHcCCEEEEEe-cccCCCcccchhhcCccEEEecCchhccCC-----CccceeEECHHHHHHHhcC---------CCCce
Confidence 99999999954 4477654 467899999999999 768766 7899999999988877432 11258
Q ss_pred eeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEcCC--CCcceE
Q 001586 401 RVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL--PFFDTV 478 (1049)
Q Consensus 401 ~l~lqtreq~irrekaTsni~t~~~l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~g~~~v~~~--~~~~~v 478 (1049)
+|+|..-.+.......|......+.++|+..++ ..+-.+|++++.+|...++++++++++++| ++++.+ ...+++
T Consensus 223 ylDL~~~~~~~~~~~~~p~Tppv~~i~aL~~al--~~i~~EGle~r~~RH~~~~~a~r~~~~alG-l~~~~~~~~~s~tv 299 (383)
T COG0075 223 YLDLKKWLKYMEKKGSTPYTPPVNLIYALREAL--DLILEEGLEARIARHRRLAEALRAGLEALG-LELFADPERRSPTV 299 (383)
T ss_pred eecHHHHHHHHhhcCCCCCCCCHHHHHHHHHHH--HHHHHhhHHHHHHHHHHHHHHHHHHHHHcC-CccccCcccCCCce
Confidence 888854444443334566666668899998887 777789999999999999999999999998 998853 223444
Q ss_pred -EEecCC---HHHHHHHHHH-cCCeeee----ecCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001586 479 -KVKCAD---AHAIASAAYK-IEMNLRV----VDSNTVTASFDETTTLEDVDKLFIVFAG 529 (1049)
Q Consensus 479 -~i~~~~---~~~v~~~L~~-~gI~~~~----~~~~~vris~~~~~t~edid~lv~aL~~ 529 (1049)
++..|. ..++...+.+ +|+.+.. +-+..+||..+-.-+.+|+...+.+|+.
T Consensus 300 ta~~~P~g~~~~~~~~~~~~~~g~~i~gg~~~l~gkifRIGhMG~~~~~dv~~~l~ale~ 359 (383)
T COG0075 300 TAIKVPEGVDDKKVRRALLKEYGVEIAGGQGPLKGKIFRIGHMGNVRPEDVLAALAALEA 359 (383)
T ss_pred EEEECCCCCCcHHHHHHHHHhCCEEecccccccCccEEEEecCccCCHHHHHHHHHHHHH
Confidence 445554 3344445554 5887643 3357899998889999999999999974
No 82
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.85 E-value=2.3e-19 Score=209.36 Aligned_cols=307 Identities=17% Similarity=0.210 Sum_probs=210.3
Q ss_pred HHHHHHHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHH-----------------------HHHhcCCCCCCEEEEc
Q 001586 630 YQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRA-----------------------YHKARGDHHRNVCIIP 686 (1049)
Q Consensus 630 ~~~~i~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~-----------------------y~~~~G~~~r~~VLip 686 (1049)
..+++....+...+++|.+.++++|.||++++.++++++.. |.+-|.+-++|+|+..
T Consensus 93 ~d~ie~l~~~ra~~lf~a~~anvqp~Sg~~An~~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l 172 (493)
T PRK13580 93 VDTVEWEAAEHAKELFGAEHAYVQPHSGADANLVAFWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGM 172 (493)
T ss_pred HHHHHHHHHHHHHHHhCCCcccccCCCcHHHHHHHHHHHhcccccCcchhccccccccccchhhhhhhhccCCCCEEEee
Confidence 44556667788889999999999999999999888777652 1111111126888865
Q ss_pred CCCCCccH-----HHHHhcCCEEEEEcCCC-CCCCCHHHHHHHHHhcCCCeEEEEEEcCCccccccccHHHHHHHHHHcC
Q 001586 687 VSAHGTNP-----ATAAMCGMKIVSVGTDA-KGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNG 760 (1049)
Q Consensus 687 ~saHg~~p-----a~a~~~G~~Vv~V~~d~-~g~iD~~~L~~~i~~~~~~taaV~it~Pn~~G~i~~di~eI~~lah~~G 760 (1049)
...||-|- .......++++..++++ +|.+|+++++++++ +++..|+++..+.+|... |+++|+++|+++|
T Consensus 173 ~l~~GGHlthg~~~n~~~~~~~~~~y~vd~~~g~iD~d~l~~~~~---~~~plvii~g~S~~~~~~-dl~~i~eia~~~g 248 (493)
T PRK13580 173 SLDSGGHLTHGFRPNISGKMFHQRSYGVDPDTGLLDYDEIAALAR---EFKPLILVAGYSAYPRRV-NFAKLREIADEVG 248 (493)
T ss_pred cCCCCCeeecCcccchhhheeeeEecccCcccCccCHHHHHHHHh---hcCCEEEEeCccccCCCc-CHHHHHHHHHHcC
Confidence 55666542 22222336777788874 59999999999998 667777787776555555 7999999999999
Q ss_pred CEEEEeccccccccCcC------CCCccCCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCC
Q 001586 761 GQVYMDGANMNAQVGLT------SPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPE 834 (1049)
Q Consensus 761 ~ll~vD~A~~~a~~gl~------~Pg~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~ 834 (1049)
++++||+||..++.+.. .| ..++||+++++||+| +||..|++++++++.+++. ...
T Consensus 249 A~L~VD~AH~~Gligg~~~~~~~~~-~~~~D~vtgT~hKaL------~GP~GG~I~~~~~l~~~L~-~a~---------- 310 (493)
T PRK13580 249 AVLMVDMAHFAGLVAGKVFTGDEDP-VPHADIVTTTTHKTL------RGPRGGLVLAKKEYADAVD-KGC---------- 310 (493)
T ss_pred CEEEEECchhhceeccccchhhcCC-CCCCcEEEeCChhhc------cCCCeEEEEecHHHHHHHh-hCC----------
Confidence 99999999976665421 12 237999999999998 4687799999987766651 000
Q ss_pred CCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeEEEEeccCcc
Q 001586 835 KSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLK 913 (1049)
Q Consensus 835 ~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~-~~v~~~g~~g~~~~e~iv~~~~~~ 913 (1049)
+.+.+++. ...+++.+.+. ..+....+++..++.+.|+++|+++|++. +.++..+ ...|.+.+++.+
T Consensus 311 -----P~i~gg~l-~p~iAA~avAl-~e~~~~ef~~y~~~l~~Na~~La~~L~~~G~~vv~gg---TdshIV~V~lg~-- 378 (493)
T PRK13580 311 -----PLVLGGPL-PHVMAAKAVAL-AEARTPEFQKYAQQVVDNARALAEGFLKRGARLVTGG---TDNHLVLIDVTS-- 378 (493)
T ss_pred -----CcccCCCc-cHHHHHHHHHH-HHHhCccHHHHHHHHHHHHHHHHHHHHhcCCCccCCC---CCCCEEEEEeCC--
Confidence 00101111 11233333333 33333345677889999999999999875 7764222 234566777652
Q ss_pred ccCCCCHHHHHHHHHHCCcccCCCCCC-C------CCEEEEEccC----CCCHHHHHHHHHHHHHHHHHH
Q 001586 914 NTAGIEPEDVAKRLMDYGFHGPTMSWP-V------PGTLMIEPTE----SESKEELDRYCDALISIREEI 972 (1049)
Q Consensus 914 ~~~g~~~~~v~k~L~~~Gi~~~~~~~p-~------~~~lri~~t~----~~t~eeid~fv~aL~~i~~~i 972 (1049)
.+.....+.++|.+.||.++....| + ...|||+++. ..+++|++++++.|.++++..
T Consensus 379 --~~~~g~~a~~~L~e~GI~vn~i~~Ptvp~g~~~~srLRIg~~A~ttrg~teedi~~iad~l~~~l~~~ 446 (493)
T PRK13580 379 --FGLTGRQAESALLDAGIVTNRNSIPSDPNGAWYTSGIRLGTPALTTLGMGSDEMDEVAELIVKVLSNT 446 (493)
T ss_pred --HHHHHHHHHHHHHHCCeEEccccCCCCCCCCCCCceEEeccchhhhcCCCHHHHHHHHHHHHHHHHhh
Confidence 1223346778999999998755444 1 4679999998 446999999999999887654
No 83
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.85 E-value=3e-19 Score=209.22 Aligned_cols=318 Identities=10% Similarity=0.012 Sum_probs=213.0
Q ss_pred cHHHHHHHHHHHHHHhhCCCc--cccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccH--HHHHhcCCEE
Q 001586 629 GYQEMFNNLGEWLCTITGFDS--FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNP--ATAAMCGMKI 704 (1049)
Q Consensus 629 G~~~~i~el~~~la~l~G~~~--~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~p--a~a~~~G~~V 704 (1049)
+..+++.++++++++++|.+. ..+.+++|+++.++++.. . ..++++||++...|..+. ..++..|+++
T Consensus 39 ~~~~~~~~~~~~l~~~~g~~~~~~vi~~~~gt~a~~~a~~~---~-----~~~Gd~Vlv~~~~~~~~~~~~~~~~~g~~v 110 (401)
T PLN02409 39 AFPALTKELLEDVKYIFKTKSGTPFIFPTTGTGAWESALTN---T-----LSPGDKVVSFRIGQFSLLWIDQMQRLNFDV 110 (401)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHh---c-----CCCCCEEEEeCCCchhHHHHHHHHHcCCce
Confidence 445778899999999999864 246666666655433322 1 125788999886665443 3366789999
Q ss_pred EEEcCCCCCCCCHHHHHHHHHhcC-CCeEEEEEEcCC-ccccccccHHHHHHH--HHHcCCEEEEeccccccccCcCCCC
Q 001586 705 VSVGTDAKGNINIEELRKAAEANR-DNLSTLMVTYPS-THGVYEEGIDEICKI--IHDNGGQVYMDGANMNAQVGLTSPG 780 (1049)
Q Consensus 705 v~V~~d~~g~iD~~~L~~~i~~~~-~~taaV~it~Pn-~~G~i~~di~eI~~l--ah~~G~ll~vD~A~~~a~~gl~~Pg 780 (1049)
+.++.+.++.+|+++|+++++++. +++++|++++++ .+|++. |+++|+++ ||++|++++||+++..+... ....
T Consensus 111 ~~v~~~~~~~~~~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~~~-~~~~i~~l~~~~~~g~~~vvD~v~s~g~~~-id~~ 188 (401)
T PLN02409 111 DVVESPWGQGADLDILKSKLRQDTNHKIKAVCVVHNETSTGVTN-DLAGVRKLLDCAQHPALLLVDGVSSIGALD-FRMD 188 (401)
T ss_pred EEEECCCCCCCCHHHHHHHHhhCcCCCccEEEEEeecccccccC-CHHHHHHHHhhhccCcEEEEEcccccCCcc-cccc
Confidence 999998766799999999998421 278999999884 599998 79999999 99999999999986532211 1235
Q ss_pred ccCCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCC-CccccCCCC--CCCCCCCC-C-CCCCccchhhHHHHHH
Q 001586 781 YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPS-HPVVSTGGI--PAPEKSQP-L-GTIAAAPWGSALILPI 855 (1049)
Q Consensus 781 ~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg-~~vg~t~~~--~~~~~~~~-t-~~i~sa~~g~~~~~~~ 855 (1049)
++|+|++++++||||+ |.||+|++++++++.+.+.. .......+. .....+.. . ..+. +.....+
T Consensus 189 ~~~~D~~~~s~~K~l~-----~P~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~Tp-----~~~~~~a 258 (401)
T PLN02409 189 EWGVDVALTGSQKALS-----LPTGLGIVCASPKALEASKTAKSPRVFFDWADYLKFYKLGTYWPYTP-----SIQLLYG 258 (401)
T ss_pred ccCccEEEEcCccccC-----cCCCcceeEECHHHHHHHhcCCCCCeecCHHHHHHHHhcCCCCCCCc-----cHHHHHH
Confidence 6899999999999996 33679999999876554321 100000000 00000000 0 1111 1111222
Q ss_pred HHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHH-HCCcc
Q 001586 856 SYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-DYGFH 933 (1049)
Q Consensus 856 a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~-~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~-~~Gi~ 933 (1049)
..+.+..+..+|+.++.++...+++++.+.|+++ +++..+.+..+......+.++ .+.+..++.++|. ++||.
T Consensus 259 l~~al~~~~~~G~e~i~~~~~~l~~~l~~~L~~~g~~~~~~~~~~~s~~v~~~~~p-----~~~~~~~l~~~l~~~~~i~ 333 (401)
T PLN02409 259 LRAALDLIFEEGLENVIARHARLGEATRLAVEAWGLKLCTKKPEWRSDTVTAVVVP-----EGIDSAEIVKNAWKKYNLS 333 (401)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCeeccCChhhcccceEEEeCC-----CCCCHHHHHHHHHHhCCEE
Confidence 3344555556788888888899999999999875 554322111111112334443 2567788988875 57998
Q ss_pred cCCCCCC-CCCEEEEEccCCCCHHHHHHHHHHHHHHHHH
Q 001586 934 GPTMSWP-VPGTLMIEPTESESKEELDRYCDALISIREE 971 (1049)
Q Consensus 934 ~~~~~~p-~~~~lri~~t~~~t~eeid~fv~aL~~i~~~ 971 (1049)
+..-..+ .+..+||+..-+++.+++.+++++|.+++.+
T Consensus 334 i~~G~~~~~~~~~Rig~~g~~~~~~~~~~~~~~~~~l~~ 372 (401)
T PLN02409 334 LGLGLNKVAGKVFRIGHLGNVNELQLLGALAGVEMVLKD 372 (401)
T ss_pred EEcCCCcccCCEEEEcCCCCCCHHHHHHHHHHHHHHHHH
Confidence 7543334 3688999999999999999999999998655
No 84
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.85 E-value=5.3e-19 Score=206.29 Aligned_cols=305 Identities=16% Similarity=0.159 Sum_probs=196.0
Q ss_pred HHHHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCEEEEEcC--C
Q 001586 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGT--D 710 (1049)
Q Consensus 633 ~i~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~Vv~V~~--d 710 (1049)
.+.++++.+++++|.+.+. ..+++++|+.+++.++. .++++|+++...|.+....++..|++++.++. +
T Consensus 64 ~~~~l~~~lA~~~g~~~~~-~~~g~t~a~~~al~~l~--------~~gd~Vlv~~~~h~s~~~~~~~~G~~~~~v~~~~~ 134 (387)
T PRK09331 64 PIADFHEDLAEFLGMDEAR-VTHGAREGKFAVMHSLC--------KKGDYVVLDGLAHYTSYVAAERAGLNVREVPKTGY 134 (387)
T ss_pred HHHHHHHHHHHHhCCCcEE-EeCCHHHHHHHHHHHhc--------CCCCEEEECCCchHHHHHHHHHcCCEEEEEeCccC
Confidence 4678999999999998754 45666666654444331 25688999988887766667889999999998 6
Q ss_pred CCCCCCHHHHHHHHHhc----CCCeEEEEEEcCCc-cccccccHHHHHHHHHHcCCEEEEeccccccccCcCCCCccCCc
Q 001586 711 AKGNINIEELRKAAEAN----RDNLSTLMVTYPST-HGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGAD 785 (1049)
Q Consensus 711 ~~g~iD~~~L~~~i~~~----~~~taaV~it~Pn~-~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~Pg~~GaD 785 (1049)
+++.+|+++|+++++++ .+++++|++++|++ +|.+. |+++|+++||++|++++||+++..+..++ ...++|+|
T Consensus 135 ~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~~~tG~~~-~l~~I~~la~~~g~~livD~a~~~g~~~~-~~~~~g~D 212 (387)
T PRK09331 135 PEYKITPEAYAEKIEEVKEETGKPPALALLTHVDGNYGNLA-DAKKVAKVAHEYGIPFLLNGAYTVGRMPV-DGKKLGAD 212 (387)
T ss_pred cCCCcCHHHHHHHHHHhhhccCCCCEEEEEECCCCCCcccc-cHHHHHHHHHHcCCEEEEECCcccCCcCC-CHHHcCCC
Confidence 77889999999999753 24789999999975 99998 79999999999999999999875432222 22357999
Q ss_pred EEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCC-CCCccchhhHHHHHHHHHHHHHHc
Q 001586 786 VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLG-TIAAAPWGSALILPISYTYIAMMG 864 (1049)
Q Consensus 786 i~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~-~i~sa~~g~~~~~~~a~a~l~~lG 864 (1049)
++++++||+|+ +++|+|++++++++.+.+......... ......+ +... .+. ...++.+..+-
T Consensus 213 ~~~~s~~K~l~-----~~~~~G~l~~~~~~i~~~~~~~~~~~~-----~~~~~~~~~~~~----~~~--~~~~aal~~~~ 276 (387)
T PRK09331 213 FIVGSGHKSMA-----ASAPSGVLATTEEYADKVFRTSRKFGV-----KEVELLGCTLRG----APL--VTLMASFPHVV 276 (387)
T ss_pred EEEeeCccccc-----CCCCEEEEEECHHHHhhcccccCCCcc-----cceeeeceecCc----hHH--HHHHHHHHHHH
Confidence 99999999995 456899999998766554211000000 0000001 1110 111 11122222221
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhcc--CCeeeccCCCceeeEEEEeccCcc---ccCCCCHHHHHHHHHHCCcccCCCCC
Q 001586 865 SKGLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEFIVDLRGLK---NTAGIEPEDVAKRLMDYGFHGPTMSW 939 (1049)
Q Consensus 865 ~eGl~~~~~~~~~~a~yL~~~L~~~--~~v~~~g~~g~~~~e~iv~~~~~~---~~~g~~~~~v~k~L~~~Gi~~~~~~~ 939 (1049)
.. + +..++...++++++++|+++ +++.-.++ ...+.+.++.+.+. ...+.....+.++|.++||..-.
T Consensus 277 ~~-~-~~~~~~~~~~~~l~~~L~~l~g~~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~~~~--- 349 (387)
T PRK09331 277 ER-V-KRWDEEVKKARWFVDELEKIEGFKQLGEKP--RNHDLMKFETPSFDEIAKKHKRRGFFLYEELKKRGIHGIK--- 349 (387)
T ss_pred HH-H-HHHHHHHHHHHHHHHHHhcCCCEEEeccCc--CcCCeEEEeCCchhHHhhhccccchhHHHHHHHcCceEEc---
Confidence 11 1 23344567888999999876 44431111 11112234433110 01123456799999999997311
Q ss_pred CCCCEEEEEccCCCCHHHHHHHHHHHHHHHHH
Q 001586 940 PVPGTLMIEPTESESKEELDRYCDALISIREE 971 (1049)
Q Consensus 940 p~~~~lri~~t~~~t~eeid~fv~aL~~i~~~ 971 (1049)
+..+.++...+...+++|+++++++|++++++
T Consensus 350 ~~~~~i~ri~~~g~t~~di~~l~~aL~~i~~~ 381 (387)
T PRK09331 350 PGATKEFKLSTYGLTWEQVEYVADAFKEIAEK 381 (387)
T ss_pred cCCceEEEEEeccCCHHHHHHHHHHHHHHHHh
Confidence 11244444444557999999999999998765
No 85
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.84 E-value=6.5e-19 Score=203.68 Aligned_cols=315 Identities=12% Similarity=0.088 Sum_probs=201.3
Q ss_pred HHHHHHHHHHHHHHhhCCCcc---ccccCchHHHHHHHHHHHHHHHHhcCCCCCCEE-EEcCCCCCcc-HHHHHhcCCEE
Q 001586 630 YQEMFNNLGEWLCTITGFDSF---SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVC-IIPVSAHGTN-PATAAMCGMKI 704 (1049)
Q Consensus 630 ~~~~i~el~~~la~l~G~~~~---~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~V-Lip~saHg~~-pa~a~~~G~~V 704 (1049)
+.+.+.++++.+++++|.+.. .+...+|++|..+++.++. .+++++ ++....|+.. ...++..|+++
T Consensus 33 ~~~~~~~~r~~la~l~~~~~~~~~i~~t~~~t~al~~~~~~l~--------~~~~~vlv~~~~~~~~~~~~~a~~~g~~~ 104 (363)
T TIGR02326 33 YNIVVEQIRQQLLALATAEEGYTSVLLQGSGTFAVEAVIGSAV--------PKDGKLLVVINGAYGARIVQIAEYLGIPH 104 (363)
T ss_pred HHHHHHHHHHHHHHHhCCCCCceEEEEcCCCHHHHHHHHHhcC--------CCCCeEEEEeCChhhHHHHHHHHHcCCce
Confidence 456788999999999999642 3455677777655544331 133444 4454444443 23467789999
Q ss_pred EEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CccccccccHHHHHHHHHHcCCEEEEeccccccccCcC-CCCcc
Q 001586 705 VSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT-SPGYI 782 (1049)
Q Consensus 705 v~V~~d~~g~iD~~~L~~~i~~~~~~taaV~it~P-n~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~-~Pg~~ 782 (1049)
+.+++++++.+|+++++++++++ ++++.|.++++ +.+|++. |+++|+++||++|++++||+++. .+... ...++
T Consensus 105 ~~v~~~~~~~~d~~~l~~~l~~~-~~~~~v~~~~~~~~tG~~~-~i~~I~~l~~~~g~~livD~~~~--~g~~~~~~~~~ 180 (363)
T TIGR02326 105 HVVDTGEVEPPDVVEVEAILAAD-PAITHIALVHCETTTGILN-PIEAVAKLAHRHGKVTIVDAMSS--FGGIPIDIAEL 180 (363)
T ss_pred EEEeCCCCCCCCHHHHHHHHhhC-CCccEEEEEeecCCccccC-cHHHHHHHHHHcCCEEEEEcccc--ccCcccchhhc
Confidence 99999888999999999999743 35667777776 4589998 79999999999999999999864 33321 22457
Q ss_pred CCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCC---C-CCCCCCCCCCCccchhhHHHHHHHHH
Q 001586 783 GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIP---A-PEKSQPLGTIAAAPWGSALILPISYT 858 (1049)
Q Consensus 783 GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~---~-~~~~~~t~~i~sa~~g~~~~~~~a~a 858 (1049)
++|++++++||+|+ |+||+|+++++++....+.+...+...+.. . ............+ . ....+..+
T Consensus 181 ~~D~~~~s~~K~l~-----~p~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ft~~---~-~~~~al~~ 251 (363)
T TIGR02326 181 HIDYLISSANKCIQ-----GVPGFGFVIARQAELAACKGNARSLSLDLYDQWRCMEDNHGKWRFTSP---T-HVVHAFAQ 251 (363)
T ss_pred CccEEEecCccccc-----cCCcceEEEECHHHHHHhhcCCCceeecHHHHHHHHhccCCCCCCCCc---H-HHHHHHHH
Confidence 89999999999995 557899999998655443221111000000 0 0000000000111 1 11122233
Q ss_pred HHHHHchh-hHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHHHCCcccCC
Q 001586 859 YIAMMGSK-GLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPT 936 (1049)
Q Consensus 859 ~l~~lG~e-Gl~~~~~~~~~~a~yL~~~L~~~-~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~ 936 (1049)
.+..+..+ |+.++.++..++++++.+.|+++ +.+.. .+.........+.++. ....+..++.+.|.++||.+..
T Consensus 252 al~~l~~~g~~~~~~~~~~~~~~~l~~~L~~~g~~~~~-~~~~~~~~~~~~~~~~---~~~~~~~~v~~~L~~~gi~v~~ 327 (363)
T TIGR02326 252 ALLELEKEGGVAARHQRYQQNQKTLVAGMRALGFEPLL-DDEIQSPIITSFYSPE---DPDYRFADFYQRLKEQGFVIYP 327 (363)
T ss_pred HHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHcCCeecc-CcccCCceEEEEECCC---CCCCCHHHHHHHHHHCCEEEEC
Confidence 34444444 57777788889999999999876 54432 1100111112344331 0024667899999999998743
Q ss_pred CCCCCCCEEEEEccCCCCHHHHHHHHHHHHHHH
Q 001586 937 MSWPVPGTLMIEPTESESKEELDRYCDALISIR 969 (1049)
Q Consensus 937 ~~~p~~~~lri~~t~~~t~eeid~fv~aL~~i~ 969 (1049)
...+..+.+||++.-+++.+|+++++++|++++
T Consensus 328 g~~~~~~~iRi~~~~~~~~edv~~~l~~l~~~l 360 (363)
T TIGR02326 328 GKVSQVDCFRIGNIGEVDAADITRLLTAIGKAM 360 (363)
T ss_pred CcCCCCCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 211124789999877889999999999998875
No 86
>PRK14012 cysteine desulfurase; Provisional
Probab=99.84 E-value=6.4e-19 Score=206.77 Aligned_cols=290 Identities=15% Similarity=0.135 Sum_probs=204.5
Q ss_pred HHHHHHHHHHHHHHhCCCCcceEeccchHHHHHHHHHHhh-hccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc
Q 001586 210 LESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNN-IQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL 288 (1049)
Q Consensus 210 le~l~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a~~-~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~~ 288 (1049)
-+.+.++++.+++++|++..++.+++++|.+...++.++. ...++|++||+++.+|+++...++.+ +..|++++.++.
T Consensus 48 ~~~~~~~r~~ia~~~g~~~~~v~~~~g~t~al~~~l~~l~~~~~~~gd~Vi~~~~~~~s~~~~~~~~-~~~g~~~~~v~~ 126 (404)
T PRK14012 48 EEAVDIARNQIADLIGADPREIVFTSGATESDNLAIKGAAHFYQKKGKHIITSKTEHKAVLDTCRQL-EREGFEVTYLDP 126 (404)
T ss_pred HHHHHHHHHHHHHHcCcCcCeEEEeCCHHHHHHHHHHHHHHhhcCCCCEEEEecCccHHHHHHHHHH-HhCCCEEEEEcc
Confidence 3568889999999999998889999999987776655442 11237899999999999999888754 346888888765
Q ss_pred --------chhhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCC-CCCcccceEEEecCc
Q 001586 289 --------KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVVGSAQ 357 (1049)
Q Consensus 289 --------~~l~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~-~p~~~GaDivvgs~k 357 (1049)
+++++ +++++++|+++++ |++|.+.|+++|+++||++|+++++++ ..++|... +..++|+|++++|++
T Consensus 127 ~~~g~~d~~~l~~~i~~~t~lv~~~~~~n~tG~~~~~~~I~~la~~~g~~vivD~-a~~~g~~~~~~~~~~~D~~~~s~~ 205 (404)
T PRK14012 127 QSNGIIDLEKLEAAMRDDTILVSIMHVNNEIGVIQDIAAIGEICRERGIIFHVDA-AQSVGKVPIDLSKLKVDLMSFSAH 205 (404)
T ss_pred CCCCcCCHHHHHHhcCCCCEEEEEECcCCCccchhhHHHHHHHHHHcCCEEEEEc-chhcCCcccCcccCCCCEEEEehh
Confidence 34555 7888999999886 789999999999999999999999943 34555443 456789999999995
Q ss_pred cccccCCCCCCceEEEEEchhHHhcCCCceeeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHH
Q 001586 358 RFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVY 437 (1049)
Q Consensus 358 ~lg~P~~~GGP~~G~l~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irrekaTsni~t~~~l~a~~aa~y~~~ 437 (1049)
++.+| ++.|+++++++...++.+...|.. . ..+.+.+|.|+. .+.++.+++-..
T Consensus 206 K~~gp-----~g~G~l~~~~~~~~~~~~~~~g~~------~-----------~~~~~~gt~~~~---~~~~l~~al~~~- 259 (404)
T PRK14012 206 KIYGP-----KGIGALYVRRKPRVRLEAQMHGGG------H-----------ERGMRSGTLPTH---QIVGMGEAARIA- 259 (404)
T ss_pred hccCC-----CceEEEEEecCCCCCCCceecCCC------c-----------cCCccCCCcCHH---HHHHHHHHHHHH-
Confidence 55433 247889998765434433333311 0 012355777763 455555555222
Q ss_pred hCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEcCC-C-C-cce--EEEecCCHHHHHHHHHHcCCeee----e-------
Q 001586 438 HGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL-P-F-FDT--VKVKCADAHAIASAAYKIEMNLR----V------- 501 (1049)
Q Consensus 438 ~g~~Gl~~ia~~~~~~a~~l~~~L~~~g~~~v~~~-~-~-~~~--v~i~~~~~~~v~~~L~~~gI~~~----~------- 501 (1049)
..+++++.++..++++++.+.|+++.++++.+. + . ... +.+...+..++.+.|.+.+|..+ .
T Consensus 260 --~~~~~~~~~~~~~l~~~l~~~L~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~g~~~~~~~~~~~~ 337 (404)
T PRK14012 260 --KEEMATENERIRALRDRLWNGIKDIEEVYLNGDLEQRVPGNLNVSFNYVEGESLIMALKDLAVSSGSACTSASLEPSY 337 (404)
T ss_pred --HhhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCEEEEEEeCcCHHHHHHhCCCeEEEchhhhCCCCCCCCH
Confidence 235677889999999999999988755776532 1 1 122 44443334567666653333110 0
Q ss_pred ----------ecCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001586 502 ----------VDSNTVTASFDETTTLEDVDKLFIVFAG 529 (1049)
Q Consensus 502 ----------~~~~~vris~~~~~t~edid~lv~aL~~ 529 (1049)
...+.||+|++.++|++|+|+++++|+.
T Consensus 338 ~~~~~~~~~~~~~~~iRls~~~~~t~~dvd~~~~~l~~ 375 (404)
T PRK14012 338 VLRALGLNDELAHSSIRFSLGRFTTEEEIDYAIELVRK 375 (404)
T ss_pred HHHHcCCChhhcCceEEEEecCCCCHHHHHHHHHHHHH
Confidence 1247899999999999999999999964
No 87
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.84 E-value=5.6e-19 Score=204.85 Aligned_cols=305 Identities=14% Similarity=0.152 Sum_probs=196.4
Q ss_pred HHHHHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCEEEEEcCCC
Q 001586 632 EMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA 711 (1049)
Q Consensus 632 ~~i~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~Vv~V~~d~ 711 (1049)
..+.++++.+++++|.+.+.+ .++|.++..+++.++. +++++||++...|.+....+++.|++++.+|.+.
T Consensus 51 ~~~~~~~e~lA~~~g~~~~~i-~~g~~~a~~~~~~~l~--------~~gd~Vl~~~~~h~s~~~~~~~~g~~~~~~~~~~ 121 (370)
T TIGR02539 51 PPIHDFLEDLAEFLGMDEARV-THGAREGKFAVMHALC--------KEGDWVVLDGLAHYTSYVAAERAGLNVKEVPHTG 121 (370)
T ss_pred hHHHHHHHHHHHHhCCCceEE-ECChHHHHHHHHHHhh--------CCCCEEEECCcccHHHHHHHHHcCCEEEEEecCC
Confidence 345577888999999987644 5677777655544432 2568899988888766666788999999999863
Q ss_pred --CCCCCHHHHHHHHHhc----CCCeEEEEEEcCC-ccccccccHHHHHHHHHHcCCEEEEeccccccccCcCCC-CccC
Q 001586 712 --KGNINIEELRKAAEAN----RDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSP-GYIG 783 (1049)
Q Consensus 712 --~g~iD~~~L~~~i~~~----~~~taaV~it~Pn-~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~P-g~~G 783 (1049)
++.+|+++|++++++. .+++++|++++|+ .+|.+. |+++|+++||++|++++||+|+..+. +..+ ..++
T Consensus 122 ~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~-~l~~i~~la~~~~~~livDea~~~g~--~~~~~~~~~ 198 (370)
T TIGR02539 122 HPEYKVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLP-DAGKVAKVCREKGVPLLLNCAYTVGR--MPVSAKEIG 198 (370)
T ss_pred cccCCcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCcccc-CHHHHHHHHHHcCCeEEEECccccCC--cCCCHHHcC
Confidence 4789999999999742 1368899999995 589998 79999999999999999999976432 2222 3568
Q ss_pred CcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHH
Q 001586 784 ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMM 863 (1049)
Q Consensus 784 aDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~l 863 (1049)
.|+++.++||+|+ +|.++|++++++++.+.+.......... .....+..+ ... .+..+++.+...
T Consensus 199 ~di~v~s~sK~~~-----~~g~~G~l~~~~~~i~~l~~~~~~~~~~-----~~~~~~~~~---~~~--~~~~~~~al~~~ 263 (370)
T TIGR02539 199 ADFIVGSGHKSMA-----ASGPCGVLGMSEEWEDIVLRKSRYSPVK-----EVELLGCTS---RGA--PIVTMMASFPHV 263 (370)
T ss_pred CCEEEeeCccccc-----CCCCEEEEEECHHHHhhhcccccCCccc-----eeeeecccc---ccc--HHHHHHHHHHHH
Confidence 9999999999995 1234899999987776653211100000 000000111 001 111222223221
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeEEEEeccCccc---cCCCCHHHHHHHHHHCCcc-cCCCC
Q 001586 864 GSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKN---TAGIEPEDVAKRLMDYGFH-GPTMS 938 (1049)
Q Consensus 864 G~eGl~~~~~~~~~~a~yL~~~L~~~-~~v~~~g~~g~~~~e~iv~~~~~~~---~~g~~~~~v~k~L~~~Gi~-~~~~~ 938 (1049)
.+.+. ...+...++++++++|+++ +++....+ ...+-+.++++.+.. ........+.++|.++||. +.
T Consensus 264 -~~~l~-~~~~~~~~~~~l~~~L~~~g~~~~~~~~--s~t~~v~~~~~~~~~~~~~~~~~~~~~~~~L~e~GI~~ir--- 336 (370)
T TIGR02539 264 -VERVK-RWDEEVKKTRWFVAELEDIGFIQLGQKP--KEHDLVKFETPGFHEIAQKHKRRGYFLYEELKKRGIHGIR--- 336 (370)
T ss_pred -HHHHH-HHHHHHHHHHHHHHHHHhCCcEEEccCC--CcCceEEEECCchhHHhhhhccccHHHHHHHHhCCCcccc---
Confidence 22222 2334456678999999886 54421111 112223355431100 0011345789999999997 33
Q ss_pred CCCCCEEEEEccCCCCHHHHHHHHHHHHHHHHH
Q 001586 939 WPVPGTLMIEPTESESKEELDRYCDALISIREE 971 (1049)
Q Consensus 939 ~p~~~~lri~~t~~~t~eeid~fv~aL~~i~~~ 971 (1049)
++..+.+|+++. ..+++|+++++++|++++++
T Consensus 337 ~~~~~~iRis~~-~~t~e~i~~l~~~L~~~~~~ 368 (370)
T TIGR02539 337 SGQTKYFKLSVY-GLTKEQVEYVVDSFEEIVEE 368 (370)
T ss_pred CCcceEEEEEec-CCCHHHHHHHHHHHHHHHHh
Confidence 233468999984 56999999999999988654
No 88
>PRK14012 cysteine desulfurase; Provisional
Probab=99.84 E-value=8.7e-19 Score=205.67 Aligned_cols=310 Identities=13% Similarity=0.150 Sum_probs=197.9
Q ss_pred HHHHHHHHHHHHhhCCCcc-ccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHH---HhcCCEEEEE
Q 001586 632 EMFNNLGEWLCTITGFDSF-SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATA---AMCGMKIVSV 707 (1049)
Q Consensus 632 ~~i~el~~~la~l~G~~~~-~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a---~~~G~~Vv~V 707 (1049)
+.+.++++.+++++|.+.. .+..++|++|...++.++..+.. +++++||++...|.++...+ +..|++++.+
T Consensus 49 ~~~~~~r~~ia~~~g~~~~~v~~~~g~t~al~~~l~~l~~~~~----~~gd~Vi~~~~~~~s~~~~~~~~~~~g~~~~~v 124 (404)
T PRK14012 49 EAVDIARNQIADLIGADPREIVFTSGATESDNLAIKGAAHFYQ----KKGKHIITSKTEHKAVLDTCRQLEREGFEVTYL 124 (404)
T ss_pred HHHHHHHHHHHHHcCcCcCeEEEeCCHHHHHHHHHHHHHHhhc----CCCCEEEEecCccHHHHHHHHHHHhCCCEEEEE
Confidence 4577899999999998763 34556676666545444432111 24688999888787665443 3469999999
Q ss_pred cCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-ccccccccHHHHHHHHHHcCCEEEEeccccccccCcCCCCccCCcE
Q 001586 708 GTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADV 786 (1049)
Q Consensus 708 ~~d~~g~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~Pg~~GaDi 786 (1049)
+.+++|.+|+++|+++|+ +++++|++++++ .+|.+. |+++|.++||++|+++++|+++..+...+ ....+++|+
T Consensus 125 ~~~~~g~~d~~~l~~~i~---~~t~lv~~~~~~n~tG~~~-~~~~I~~la~~~g~~vivD~a~~~g~~~~-~~~~~~~D~ 199 (404)
T PRK14012 125 DPQSNGIIDLEKLEAAMR---DDTILVSIMHVNNEIGVIQ-DIAAIGEICRERGIIFHVDAAQSVGKVPI-DLSKLKVDL 199 (404)
T ss_pred ccCCCCcCCHHHHHHhcC---CCCEEEEEECcCCCccchh-hHHHHHHHHHHcCCEEEEEcchhcCCccc-CcccCCCCE
Confidence 999889999999999997 789999999985 599998 79999999999999999999975332221 234578999
Q ss_pred EEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchh
Q 001586 787 CHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSK 866 (1049)
Q Consensus 787 ~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~e 866 (1049)
+++++||.+ |.+|.|+++++++....+.....|.... ++.+.++.++. ....+. +.+..+ ..
T Consensus 200 ~~~s~~K~~------gp~g~G~l~~~~~~~~~~~~~~~g~~~~---~~~~~gt~~~~-----~~~~l~---~al~~~-~~ 261 (404)
T PRK14012 200 MSFSAHKIY------GPKGIGALYVRRKPRVRLEAQMHGGGHE---RGMRSGTLPTH-----QIVGMG---EAARIA-KE 261 (404)
T ss_pred EEEehhhcc------CCCceEEEEEecCCCCCCCceecCCCcc---CCccCCCcCHH-----HHHHHH---HHHHHH-Hh
Confidence 999999965 3236789988875433221111121000 00111111211 111111 222222 23
Q ss_pred hHHHHHHHHHHHHHHHHHHHhccCCeeeccC-CCceeeEEEEeccCccccCCCCHHHHHHHHHHCCcccCCCC-------
Q 001586 867 GLTEASKIAILNANYMAKRLEKHYPILFRGV-NGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMS------- 938 (1049)
Q Consensus 867 Gl~~~~~~~~~~a~yL~~~L~~~~~v~~~g~-~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~------- 938 (1049)
++.+..++...+++++.+.|+++..+...+. .....+.+.+.+. ..+..++.+.|.+.++..+...
T Consensus 262 ~~~~~~~~~~~l~~~l~~~L~~~~~i~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~~~i~~g~~~~~~~~~~ 335 (404)
T PRK14012 262 EMATENERIRALRDRLWNGIKDIEEVYLNGDLEQRVPGNLNVSFN------YVEGESLIMALKDLAVSSGSACTSASLEP 335 (404)
T ss_pred hHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCEEEEEEe------CcCHHHHHHhCCCeEEEchhhhCCCCCCC
Confidence 4555667777889999999987532322121 1111122223322 1234567777754443322100
Q ss_pred ------CC-----CCCEEEEEccCCCCHHHHHHHHHHHHHHHHHHHH
Q 001586 939 ------WP-----VPGTLMIEPTESESKEELDRYCDALISIREEIAQ 974 (1049)
Q Consensus 939 ------~p-----~~~~lri~~t~~~t~eeid~fv~aL~~i~~~i~~ 974 (1049)
+| ..+.+|++++..+|++|+|+++++|+++++.++.
T Consensus 336 ~~~~~~~~~~~~~~~~~iRls~~~~~t~~dvd~~~~~l~~~~~~~~~ 382 (404)
T PRK14012 336 SYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYAIELVRKSIGKLRE 382 (404)
T ss_pred CHHHHHcCCChhhcCceEEEEecCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 11 1378999999999999999999999999887655
No 89
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.84 E-value=1.3e-18 Score=203.82 Aligned_cols=346 Identities=14% Similarity=0.110 Sum_probs=221.8
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhcC-CCccccccCCCCCCCC-CcHHHHHHHHhCCcccccc-CCChhhHhhhHHHHHHHH
Q 001586 140 KFSKFDEGLTESQMIEHMQKLASM-NKVYKSFIGMGYYNTH-VPPVILRNIMENPAWYTQY-TPYQAEIAQGRLESLLNF 216 (1049)
Q Consensus 140 ~lp~~~~~~sE~e~~~~~~~la~~-n~~~~~~lG~g~y~~~-~p~~i~~~~~~~~~~~t~y-tpyq~e~sqg~le~l~e~ 216 (1049)
.|| +++.+..|+++++...-.. +..-..|.| ++.+. .|.+.. .+.+- +-+.+ +|.. +....+.+.+.
T Consensus 16 ~~p--~~~~~~~~~~~~~~~~iyld~~a~~~~~~--~~tt~~~p~~~~-~~~~~--l~~~~~np~s---~~~~~~le~~~ 85 (431)
T TIGR01788 16 RMP--EEEMPPDAAYQLIHDELSLDGNPRLNLAT--FVTTWMEPEARK-LMDET--INKNMIDKDE---YPQTAEIENRC 85 (431)
T ss_pred cCC--CCCCCHHHHHHHHHHHhhhcCCcceeeee--eeCCCCCHHHHH-HHHHH--HhcCCCCccc---CccHHHHHHHH
Confidence 566 6889999999999865322 111111221 12222 444432 23221 10111 2322 22334788899
Q ss_pred HHHHHHHhCCC-C-cceEe--ccchHHHHHHHHHHh---hhc--c-----C---CCCEEEEcCCCCHHHHHHHHHhhcCC
Q 001586 217 QTMIADLTGLP-M-SNASL--LDEGTAAAEAMAMCN---NIQ--K-----G---KKKTFIIASNCHPQTIDICITRADGF 279 (1049)
Q Consensus 217 q~~ia~L~G~~-~-~n~sl--~~~~Ta~~eA~~~a~---~~~--~-----~---~g~~Vlv~~~~Hps~~~~l~~~a~~~ 279 (1049)
+.++++++|++ . ..+.+ ++||| ||.++|+ +.. . + .+.+|++++.+|+++.+.++. +
T Consensus 86 ~~~la~llg~~~~~~~~~g~~TsGgT---EAn~~al~~ar~~~~~~~~~~g~~~~~~~ii~s~~~H~sv~ka~~~----l 158 (431)
T TIGR01788 86 VNMLADLWHAPAKDAEAVGTSTIGSS---EAIMLGGLAMKWRWRKRMEAAGKPTDKPNLVMGSNVQVCWEKFARY----F 158 (431)
T ss_pred HHHHHHHhCCCCCCCCCeEEEechHH---HHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCcchHHHHHHHHH----c
Confidence 99999999998 3 24444 68888 5544432 211 0 0 124799999999999988653 4
Q ss_pred CeEEEEeCcc---------hhhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhC------CcEEEEEe-cccc----
Q 001586 280 DIKVVVSDLK---------DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHAN------GVKVVMAT-DLLA---- 337 (1049)
Q Consensus 280 gi~v~~v~~~---------~l~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~------galliV~a-~~~a---- 337 (1049)
|++++.++++ +|++ ++++|.+|+++.. |.+|.++|+++|+++|+++ |++++|++ +..+
T Consensus 159 g~~v~~i~~d~~~~~vd~~~L~~~i~~~t~lV~~t~g~t~tG~idpi~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~ 238 (431)
T TIGR01788 159 DVELREVPMDPGRYVIDPEQVVEAVDENTIGVVCILGTTYTGEYEDVKALNDALDEYNAKTGWDIPIHVDAASGGFIAPF 238 (431)
T ss_pred CceeEEEecCCCceeeCHHHHHHHHhhCCeEEEEEeCCCCCcccCCHHHHHHHHHHHHhhhCCCceEEEecccHHHHHHH
Confidence 6777776552 3455 7888999999986 6899999999999999999 99999943 3211
Q ss_pred -ccCCC-CCCcccceEEEecCcccc-ccCCCCCCceEEEEEchh--HHhcC--CCceeeeeecCCCCcceeeeccccccc
Q 001586 338 -LTILK-PPGELGADIVVGSAQRFG-VPMGYGGPHAAFLATSQE--YKRMM--PGRIVGVSIDSSGKPALRVAMQTREQH 410 (1049)
Q Consensus 338 -lg~l~-~p~~~GaDivvgs~k~lg-~P~~~GGP~~G~l~~~~~--l~~~l--pgrivG~s~d~~g~~~~~l~lqtreq~ 410 (1049)
.+-+. +....|||.+..|++||+ +|. +.|+++++++ +.+.+ .+..+|.. ...+.+..
T Consensus 239 ~~~~~~~~~~~~~~DSis~s~HK~~~~P~-----g~G~l~~r~~~~l~~~~~~~~~yl~~~-----~~~~t~~~------ 302 (431)
T TIGR01788 239 VYPDLEWDFRLPRVKSINVSGHKYGLVYP-----GVGWVIWRDEEALPEELIFHVNYLGGD-----EPTFTLNF------ 302 (431)
T ss_pred hCCCchhhcCCCCceEEEECchhccCCCC-----CcEEEEEeChHHcchhheecccccCCC-----CCCcceec------
Confidence 11111 113458999999997775 454 5789999875 22222 11122210 00111111
Q ss_pred ccccccCCCccchhHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEcCC-CCcceEEEecC-----C
Q 001586 411 IRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL-PFFDTVKVKCA-----D 484 (1049)
Q Consensus 411 irrekaTsni~t~~~l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~g~~~v~~~-~~~~~v~i~~~-----~ 484 (1049)
-|+. + ...+.-.. +..+|.+|++++.+++.+++++|.++|++.++++++.+ +.+..|+|+.+ +
T Consensus 303 sR~g--~-------~al~~w~~--l~~lG~~G~~~i~~~~~~la~~l~~~L~~~~~~el~~~~~~~~iV~Fr~~~~~~~~ 371 (431)
T TIGR01788 303 SRPA--N-------QVIAQYYN--FLRLGREGYRKIMQNSLDVARYLAEEIAKLGPFEIISDGSGIPLVAFKLKDDADPG 371 (431)
T ss_pred CchH--H-------HHHHHHHH--HHHhcHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeCCCCceEEEEEeCCCCCCC
Confidence 1110 0 11111111 47889999999999999999999999999977999865 56777878754 1
Q ss_pred --HHHHHHHHHHcCCeeeee-c------CCeEEEEeccCCCHHHHHHHHHHHhC
Q 001586 485 --AHAIASAAYKIEMNLRVV-D------SNTVTASFDETTTLEDVDKLFIVFAG 529 (1049)
Q Consensus 485 --~~~v~~~L~~~gI~~~~~-~------~~~vris~~~~~t~edid~lv~aL~~ 529 (1049)
..++.++|.++||.+... . .-.+|+++....+++.+|+|++.|+.
T Consensus 372 ~~~~~l~~~L~~~G~~~~~~~~p~~~~~~~~lR~~~~~~~~~~~~~~~~~~~~~ 425 (431)
T TIGR01788 372 YTLYDLSHRLRERGWIVPAYTLPKNAEDIVVMRIVVREGFSRDLAELLIEDIEA 425 (431)
T ss_pred cCHHHHHHHHHHCCCcccCCCCCCccCCeEEEEEEecCCCCHHHHHHHHHHHHH
Confidence 578999999999965321 1 13589999999999999999999975
No 90
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.84 E-value=1.6e-19 Score=206.21 Aligned_cols=315 Identities=18% Similarity=0.210 Sum_probs=226.1
Q ss_pred CccccccCCCCCCCCCcHHHHHHHHhCCccccccCCChhhHhhhHHHHHHHHHHHHHHHhCCCCcceEeccchHHHHHHH
Q 001586 165 KVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAM 244 (1049)
Q Consensus 165 ~~~~~~lG~g~y~~~~p~~i~~~~~~~~~~~t~ytpyq~e~sqg~le~l~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~ 244 (1049)
...++|||..-+|..+.++++ .+.+ |.+..+ .++...|+.+.+.++++.+|+++|.+. +.+|.+|=.+..++
T Consensus 44 f~SNdYLGLa~~~~~~~a~~~-~~~~---~g~g~~--gsR~i~G~~~~h~~LE~~lA~f~g~e~--al~f~SGy~AN~~~ 115 (388)
T COG0156 44 FCSNDYLGLASHPELIEAAKA-AIRR---YGVGAG--GSRLISGTSDLHVELEEELADFLGAEA--ALLFSSGFVANLGL 115 (388)
T ss_pred eeccCcccccCCHHHHHHHHH-HHHH---hCCCCC--CcCcccCCcHHHHHHHHHHHHHhCCCc--EEEEcccchhHHHH
Confidence 345789999998887777764 3433 223222 667788999999999999999999986 67777776666665
Q ss_pred HHHhhhccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCcchhhc-cCC---C--EeEEEEEc-C-CCCeeeccHH
Q 001586 245 AMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKDIDY-KSG---D--VCGVLVQY-P-GTEGEVLDYG 316 (1049)
Q Consensus 245 ~~a~~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~~~~l~~-l~~---~--t~~V~v~~-p-n~~G~i~di~ 316 (1049)
+-++. +++|-|+.++.+|.|.++.++ +.+..-+.+.+.|+++|++ +.+ . .+.++|+. . ++.|.+.|++
T Consensus 116 i~~l~---~~~dli~~D~lnHASiidG~r-ls~a~~~~f~HnD~~~Le~~l~~~~~~~~~~~~IvtegVfSMdGdiApL~ 191 (388)
T COG0156 116 LSALL---KKGDLIFSDELNHASIIDGIR-LSRAEVRRFKHNDLDHLEALLEEARENGARRKLIVTEGVFSMDGDIAPLP 191 (388)
T ss_pred HHHhc---CCCcEEEEechhhhhHHHHHH-hCCCcEEEecCCCHHHHHHHHHhhhccCCCceEEEEeccccCCCCcCCHH
Confidence 55543 367889999999999999987 4565667777788888876 432 1 23445554 3 8999999999
Q ss_pred HHHHHHHhCCcEEEEEeccccccCCCCCCc-----cc-----ceEEEecC-ccccccCCCCCCceEEEEEchhHHhcCCC
Q 001586 317 DFIKNAHANGVKVVMATDLLALTILKPPGE-----LG-----ADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPG 385 (1049)
Q Consensus 317 ~I~~~ah~~galliV~a~~~alg~l~~p~~-----~G-----aDivvgs~-k~lg~P~~~GGP~~G~l~~~~~l~~~lpg 385 (1049)
+|+++++++|++++| ++.++.|++.+-|. +| .||++++. |.||. .| ||+.++..+.+.+
T Consensus 192 ~l~~L~~ky~a~L~V-DEAHa~Gv~G~~GrG~~e~~g~~~~~vdi~~gTlsKAlGs---~G----g~v~g~~~~~d~L-- 261 (388)
T COG0156 192 ELVELAEKYGALLYV-DEAHAVGVLGPNGRGLAEHFGLEPEEVDIIVGTLGKALGS---SG----GYIAGSAALIDYL-- 261 (388)
T ss_pred HHHHHHHHhCcEEEE-EccccccccCCCCccHHHHhCCCCccceEEEEEchhhhcc---cC----ceeeCcHHHHHHH--
Confidence 999999999999999 46788888865432 33 38999996 99973 34 5888887776654
Q ss_pred ceeeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHhhcCC
Q 001586 386 RIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLG 465 (1049)
Q Consensus 386 rivG~s~d~~g~~~~~l~lqtreq~irrekaTsni~t~~~l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~g 465 (1049)
|.++.+.|.|++..++.+++...+.--.+-..+..++..+++.++++.++..|
T Consensus 262 ---------------------------~~~ar~~ifStalpP~~aaa~~~al~~l~~~~~~r~~L~~~~~~~~~~~~~~~ 314 (388)
T COG0156 262 ---------------------------RNRARPFIFSTALPPAVAAAALAALRILEEGPERRERLQELAAFFRSLLKALG 314 (388)
T ss_pred ---------------------------HHhCCceeccCCCCHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcC
Confidence 12344556666555565555432222222235677888899999997777666
Q ss_pred CeEEcC-CCCcceEEEecCC-HHHHHHHHHHcCCeeeee-----c--CCeEEEEeccCCCHHHHHHHHHHHhC
Q 001586 466 TVEVQG-LPFFDTVKVKCAD-AHAIASAAYKIEMNLRVV-----D--SNTVTASFDETTTLEDVDKLFIVFAG 529 (1049)
Q Consensus 466 ~~~v~~-~~~~~~v~i~~~~-~~~v~~~L~~~gI~~~~~-----~--~~~vris~~~~~t~edid~lv~aL~~ 529 (1049)
+.+.+ ....-++.+..+. +.++.+.|.++||++..+ + ...+|+|++..+|++|||+++++|..
T Consensus 315 -~~~~~s~s~I~pv~~gd~~~a~~~s~~l~~~Gi~v~~i~~PTVp~gtarlRi~lta~ht~~~I~~l~~~l~~ 386 (388)
T COG0156 315 -LVLLPSESPIIPVILGDEERALEASRALLEEGIYVSAIRPPTVPKGTARLRITLTAAHTEEDIDRLAEALSE 386 (388)
T ss_pred -CccCCCCCCeeeeEeCCHHHHHHHHHHHHHCCeeEeeecCCCCCCCcceEEEEecCCCCHHHHHHHHHHHHh
Confidence 66532 2223344444433 778999999999988654 2 26799999999999999999999863
No 91
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.83 E-value=1.1e-18 Score=200.54 Aligned_cols=312 Identities=13% Similarity=0.128 Sum_probs=202.6
Q ss_pred HHHHHHHHHHHHHhhCCCcc--c-cccCchHHHHHHHHHHHHHHHHhcCCCCCCEEE-EcCCCCCc-cHHHHHhcCCEEE
Q 001586 631 QEMFNNLGEWLCTITGFDSF--S-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGT-NPATAAMCGMKIV 705 (1049)
Q Consensus 631 ~~~i~el~~~la~l~G~~~~--~-l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VL-ip~saHg~-~pa~a~~~G~~Vv 705 (1049)
.+...++++++++++|.+.. . +...+|++|.++++.++. .++++++ +....++. ....++..|.+++
T Consensus 30 ~~~~~~~~~~la~~~~~~~~~~~i~~~~~gt~~l~~~~~~~~--------~~~~~vi~~~~~~~~~~~~~~a~~~g~~~~ 101 (355)
T TIGR03301 30 NDVTDQVRDRLLALAGGDDNHTCVLLQGSGTFAVEATIGSLV--------PRDGKLLVLINGAYGERLAKICEYLGIPHT 101 (355)
T ss_pred HHHHHHHHHHHHHHhcCCCCCcEEEEeCCcHHHHHHHHHhcc--------CCCCeEEEECCCchhhHHHHHHHHcCCceE
Confidence 36677899999999999753 2 345666666654444321 1345555 44433333 2344678999999
Q ss_pred EEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-ccccccccHHHHHHHHHHcCCEEEEeccccccccCcC-CCCccC
Q 001586 706 SVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT-SPGYIG 783 (1049)
Q Consensus 706 ~V~~d~~g~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~-~Pg~~G 783 (1049)
.++.++++.+|++++++.++++ ++++.|++++++ .+|.+. |+++|+++|+++|+++++|+++. .+... ...+++
T Consensus 102 ~i~~~~~~~~d~~~l~~~l~~~-~~~~~v~~~~~~~~~G~~~-~~~~i~~l~~~~~~~livD~~~s--~g~~~~~~~~~~ 177 (355)
T TIGR03301 102 DLNFSEYEPPDLNRIEEALAAD-PDITHVATVHHETTTGILN-PLEAIAKVARSHGAVLIVDAMSS--FGAIPIDIEELD 177 (355)
T ss_pred EEecCCCCCCCHHHHHHHHHhC-CCceEEEEEecCCcccchh-HHHHHHHHHHHcCCEEEEEeccc--cCCcccchhhcC
Confidence 9999877889999999999753 467777777774 589998 79999999999999999998753 33321 234678
Q ss_pred CcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCC---CCC-CCCCCCCCCCccchhhHHHHHHHHHH
Q 001586 784 ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGI---PAP-EKSQPLGTIAAAPWGSALILPISYTY 859 (1049)
Q Consensus 784 aDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~---~~~-~~~~~t~~i~sa~~g~~~~~~~a~a~ 859 (1049)
.|++++++||+|+ |+||+|++++++++.+.+.+.......+. ..+ .+...+.... +.....++.+.
T Consensus 178 ~d~~~~s~~K~l~-----~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~-----~~~~~~a~~~a 247 (355)
T TIGR03301 178 VDALIASANKCLE-----GVPGFGFVIARRDLLEASAGNARSLYLDLYDQWAYMEKTGKWRFTP-----PTHTVYAFAQA 247 (355)
T ss_pred ccEEEecCCcccc-----cCCceeEEEECHHHHHHhhCCCCCceeeHHHHHHHhhhcCCCCCCC-----cHHHHHHHHHH
Confidence 9999999999984 56789999999876655432111000000 000 0000011111 12222334455
Q ss_pred HHHHchhh-HHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHHHCCcccCCC
Q 001586 860 IAMMGSKG-LTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTM 937 (1049)
Q Consensus 860 l~~lG~eG-l~~~~~~~~~~a~yL~~~L~~~-~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~ 937 (1049)
+..+..+| +.+..++..++++++.+.|++. +++..+....... .+.+.++. ....+..++.++|.++||.+...
T Consensus 248 l~~~~~~g~~~~~~~~~~~~~~~~~~~L~~~g~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~~~l~~~gi~i~~~ 323 (355)
T TIGR03301 248 LEELEAEGGVPARIARYRRNRELLVDGLRALGFQPLLPERWQSPI-IVSFLYPD---DPDFDFDDFYQELKERGFVIYPG 323 (355)
T ss_pred HHHHHHcccHHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCCCCc-EEEEECCC---CCcchHHHHHHHHHHCCEEEECC
Confidence 66665665 7777778888999999999875 4443221101011 12344431 00134578999999999987543
Q ss_pred CCCCCCEEEEEccCCCCHHHHHHHHHHHHHH
Q 001586 938 SWPVPGTLMIEPTESESKEELDRYCDALISI 968 (1049)
Q Consensus 938 ~~p~~~~lri~~t~~~t~eeid~fv~aL~~i 968 (1049)
.....+.+||++...++++|+++++++|+++
T Consensus 324 ~~~~~~~iRis~~~~~~~~~i~~~~~~l~~~ 354 (355)
T TIGR03301 324 KLTLADTFRIGTIGEIDAADIERLLEAIKDA 354 (355)
T ss_pred ccccccEEEEecCCCCCHHHHHHHHHHHHhh
Confidence 2122378999998889999999999999865
No 92
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.83 E-value=2.1e-18 Score=199.72 Aligned_cols=311 Identities=14% Similarity=0.139 Sum_probs=202.6
Q ss_pred HHHHHHHHHHHHhhCCCc--c-ccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccH----HHHHhcCCEE
Q 001586 632 EMFNNLGEWLCTITGFDS--F-SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNP----ATAAMCGMKI 704 (1049)
Q Consensus 632 ~~i~el~~~la~l~G~~~--~-~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~p----a~a~~~G~~V 704 (1049)
+...++++.+++++|.+. . .+..++|++|..+++.++. .++++++++.. +.++ ..++..|+++
T Consensus 37 ~~~~~~~~~l~~l~~~~~~~~~i~~~~~gt~~l~~~~~~l~--------~~~~~vlv~~~--~~~~~~~~~~~~~~g~~~ 106 (368)
T PRK13479 37 ALTASVRAKLVAIATGEEGYTCVPLQGSGTFSVEAAIGSLV--------PRDGKVLVPDN--GAYGARIAQIAEYLGIAH 106 (368)
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEEcCCcHHHHHHHHHhcc--------CCCCeEEEEeC--CchHHHHHHHHHHcCCcE
Confidence 567899999999999864 2 3456777777755544431 13456776542 3333 4467789999
Q ss_pred EEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-ccccccccHHHHHHHHHHcCCEEEEeccccccccCcC-CCCcc
Q 001586 705 VSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT-SPGYI 782 (1049)
Q Consensus 705 v~V~~d~~g~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~-~Pg~~ 782 (1049)
+.++.++++.+|+++++++++++ +++++|++++|+ .+|... |+++|+++||++|++++||+++.. +... ...++
T Consensus 107 ~~i~~~~~~~~d~~~l~~~l~~~-~~~~~v~~~~~~~~tG~~~-~~~~i~~l~~~~~~~livDa~~~~--g~~~~~~~~~ 182 (368)
T PRK13479 107 VVLDTGEDEPPDAAEVEAALAAD-PRITHVALVHCETTTGILN-PLDEIAAVAKRHGKRLIVDAMSSF--GAIPIDIAEL 182 (368)
T ss_pred EEEECCCCCCCCHHHHHHHHHhC-CCCcEEEEEcccCcccccc-CHHHHHHHHHHcCCEEEEEccccc--CCcccccccc
Confidence 99999877889999999999742 467788899996 599998 799999999999999999987533 3221 22457
Q ss_pred CCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCC---CCC-CCCCCCCCCCccchhhHHHHHHHHH
Q 001586 783 GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGI---PAP-EKSQPLGTIAAAPWGSALILPISYT 858 (1049)
Q Consensus 783 GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~---~~~-~~~~~t~~i~sa~~g~~~~~~~a~a 858 (1049)
++|++++++||+|+ |.||+|++++++++.+.+.........+. ... .+...... .. +........+
T Consensus 183 ~~d~~v~s~~K~l~-----g~~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-t~----~~~~~~~l~~ 252 (368)
T PRK13479 183 GIDALISSANKCIE-----GVPGFGFVIARRSELEACKGNSRSLSLDLYDQWAYMEKTGQWRF-TP----PTHVVAAFYQ 252 (368)
T ss_pred CceEEEecCccccc-----cCCCceEEEECHHHHHHhhcCCCCeeecHHHHHhhhcccCCCCC-CC----cHHHHHHHHH
Confidence 89999999999984 55789999999876655433211100000 000 00000000 11 1111222334
Q ss_pred HHHHHchh-hHHHHHHHHHHHHHHHHHHHhcc-CCeeeccC-CCceeeEEEEeccCccccCCCCHHHHHHHHHHCCcccC
Q 001586 859 YIAMMGSK-GLTEASKIAILNANYMAKRLEKH-YPILFRGV-NGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGP 935 (1049)
Q Consensus 859 ~l~~lG~e-Gl~~~~~~~~~~a~yL~~~L~~~-~~v~~~g~-~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~ 935 (1049)
.+..+..+ ++.+..++...+++++.+.|+++ +.+..+.. ..+. .+.+.++. ..+.+..++.++|.++||.+.
T Consensus 253 al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~--~~~~~~~~---~~~~~~~~l~~~L~~~gi~v~ 327 (368)
T PRK13479 253 ALLELEEEGGVPARGARYANNQRTLVAGMRALGFEPLLDAEIQSPI--IVTFHAPA---DPAYDFKEFYERLKEQGFVIY 327 (368)
T ss_pred HHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHcCCcccCCchhcCce--EEEEECCC---CCCcCHHHHHHHHHHCCEEEe
Confidence 44444344 46777788888999999999875 44432110 0111 12222221 012466789999999999975
Q ss_pred CCCCCCCCEEEEEccCCCCHHHHHHHHHHHHHHHHH
Q 001586 936 TMSWPVPGTLMIEPTESESKEELDRYCDALISIREE 971 (1049)
Q Consensus 936 ~~~~p~~~~lri~~t~~~t~eeid~fv~aL~~i~~~ 971 (1049)
....+..+++|++..-+++++|+++++++|++++++
T Consensus 328 ~g~~~~~~~iRis~~~~~t~edi~~~l~~L~~~l~~ 363 (368)
T PRK13479 328 PGKLTQVDTFRIGCIGDVDAADIRRLVAAIAEALYW 363 (368)
T ss_pred cCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHHH
Confidence 322111368999987778999999999999988764
No 93
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.83 E-value=1e-18 Score=192.72 Aligned_cols=294 Identities=21% Similarity=0.287 Sum_probs=208.5
Q ss_pred HHHHHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHH---HHhcC--CEEEE
Q 001586 632 EMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT---AAMCG--MKIVS 706 (1049)
Q Consensus 632 ~~i~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~---a~~~G--~~Vv~ 706 (1049)
+++.-..+...+|+|.+.+++||.||++++.+.++|+. .++|+|+-.+..||-|-.. ....| ++++.
T Consensus 72 ~vE~laierak~LFga~~anVQPhSGs~AN~av~~All--------~pGDtimgm~l~~GGHltHg~~v~~sG~~~~~v~ 143 (413)
T COG0112 72 EVEELAIERAKKLFGAEYANVQPHSGSQANQAVYLALL--------QPGDTIMGLDLSHGGHLTHGSPVNFSGKLFNVVS 143 (413)
T ss_pred HHHHHHHHHHHHHhCCCccccCCCCchHHHHHHHHHHc--------CCCCeEecccCCCCCcccCCCCCCccceeEEeEe
Confidence 44555677888999999999999999999988877764 2678999766677765332 22223 57888
Q ss_pred EcCCC-CCCCCHHHHHHHHHhcCCCeEEEEEEcCCccccccccHHHHHHHHHHcCCEEEEecccccccc---CcCCCCcc
Q 001586 707 VGTDA-KGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQV---GLTSPGYI 782 (1049)
Q Consensus 707 V~~d~-~g~iD~~~L~~~i~~~~~~taaV~it~Pn~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~---gl~~Pg~~ 782 (1049)
.++|+ ++.+|.|++++++.+++++ +|+.-...+.-.+ |+++++++|++.|++|.+|.||..+++ .+.+|-..
T Consensus 144 Y~vd~et~~IDyD~~~k~a~e~kPK--~ii~G~SaY~r~i--d~~~~reIad~VGA~L~~DmAHiaGLVA~G~~p~P~~~ 219 (413)
T COG0112 144 YGVDPETGLIDYDEVEKLAKEVKPK--LIIAGGSAYSRPI--DFKRFREIADEVGAYLMVDMAHVAGLIAGGVHPNPLPH 219 (413)
T ss_pred cccccccCccCHHHHHHHHHHhCCC--EEEECcccccccc--CHHHHHHHHHHhCceEEehHHHHHHHHhcccCCCCCCc
Confidence 88885 4999999999999876555 5666554454555 699999999999999999999865443 34466665
Q ss_pred CCcEEEeCCCcccccCCCCCCCceeEEEEcc-cccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHH
Q 001586 783 GADVCHLNLHKTFCIPHGGGGPGMGPIGVKK-HLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIA 861 (1049)
Q Consensus 783 GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~-~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~ 861 (1049)
+||++.+.|||| .||..|+|.+++ ++..++.-..+ +.+-+.|. .-.+++.+.+...
T Consensus 220 -AdvVTtTTHKTl------rGPrGG~Il~~~eel~kkin~aVF---------------Pg~qggpl-~HviAakaVa~~E 276 (413)
T COG0112 220 -ADVVTTTTHKTL------RGPRGGIILTNDEELAKKINSAVF---------------PGLQGGPL-MHVIAAKAVAFKE 276 (413)
T ss_pred -cceEeCCcccCC------CCCCceEEEeccHHHHHHhhhhcC---------------CccCCChH-HHHHHHHHHHHHH
Confidence 999999999999 689999999996 66665432111 11111111 1123334444444
Q ss_pred HHchhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHHHCCcccC--CCC
Q 001586 862 MMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGP--TMS 938 (1049)
Q Consensus 862 ~lG~eGl~~~~~~~~~~a~yL~~~L~~~-~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~--~~~ 938 (1049)
...-++++.+++.+.||+.|++.|.+. ++++. | +...|.+++|+++ .+++..+..+.|.+.||.++ ++.
T Consensus 277 -al~p~fk~Ya~qVv~NAkaLAe~l~~~G~~vvs-G--gTdnHl~lVDl~~----~~~~Gk~ae~~L~~~~It~NKN~iP 348 (413)
T COG0112 277 -ALEPEFKEYAKQVVKNAKALAEALKERGFKVVS-G--GTDNHLVLVDLRS----KGLTGKKAEAALERAGITVNKNAIP 348 (413)
T ss_pred -HcChhHHHHHHHHHHHHHHHHHHHHHcCCeEec-C--CccceEEEEEccc----CCCCHHHHHHHHHHcCEeeccCCCC
Confidence 445689999999999999999999875 88764 3 3556889999873 25778888899999999875 333
Q ss_pred C----C-CCCEEEEEccCCC----CHHHHHHHHHHHHHH
Q 001586 939 W----P-VPGTLMIEPTESE----SKEELDRYCDALISI 968 (1049)
Q Consensus 939 ~----p-~~~~lri~~t~~~----t~eeid~fv~aL~~i 968 (1049)
| | ++..+||...+.+ .++|+.+..+.+.++
T Consensus 349 ~D~~~p~~tSGIRiGtpa~TtrG~~e~e~~~Ia~~I~~v 387 (413)
T COG0112 349 FDPESPFVTSGIRIGTPAVTTRGFGEAEMEEIADLIADV 387 (413)
T ss_pred CCCCCCCCCccceeccHHHhhcCCCHHHHHHHHHHHHHH
Confidence 3 2 3567898766544 345555555544444
No 94
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.83 E-value=1.8e-18 Score=200.11 Aligned_cols=293 Identities=15% Similarity=0.104 Sum_probs=201.2
Q ss_pred HHHHHHHHHHHHHHHhCCCCc--ceEeccchHHHHHHHHHHhhhccCCCCE-EEEcCCCCHHHHHHHHHhhcCCCeEEEE
Q 001586 209 RLESLLNFQTMIADLTGLPMS--NASLLDEGTAAAEAMAMCNNIQKGKKKT-FIIASNCHPQTIDICITRADGFDIKVVV 285 (1049)
Q Consensus 209 ~le~l~e~q~~ia~L~G~~~~--n~sl~~~~Ta~~eA~~~a~~~~~~~g~~-Vlv~~~~Hps~~~~l~~~a~~~gi~v~~ 285 (1049)
..+.+.+.++.+++|+|++.. ++.++.++|.++++++.++. . ++++ |+++...|+.... ..++..|++++.
T Consensus 33 ~~~~~~~~r~~la~l~~~~~~~~~i~~t~~~t~al~~~~~~l~-~--~~~~vlv~~~~~~~~~~~---~~a~~~g~~~~~ 106 (363)
T TIGR02326 33 YNIVVEQIRQQLLALATAEEGYTSVLLQGSGTFAVEAVIGSAV-P--KDGKLLVVINGAYGARIV---QIAEYLGIPHHV 106 (363)
T ss_pred HHHHHHHHHHHHHHHhCCCCCceEEEEcCCCHHHHHHHHHhcC-C--CCCeEEEEeCChhhHHHH---HHHHHcCCceEE
Confidence 455677888999999999764 68889999999888776653 2 4555 5567778876532 234567888887
Q ss_pred eCcc--------hhhc-cC--CCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCC-CCCCcccceEE
Q 001586 286 SDLK--------DIDY-KS--GDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTIL-KPPGELGADIV 352 (1049)
Q Consensus 286 v~~~--------~l~~-l~--~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l-~~p~~~GaDiv 352 (1049)
++.+ ++++ +. ++++.|++.++ |++|.+.|+++|+++||++|++++|++ ..++|.. .+..+||+|++
T Consensus 107 v~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~i~~I~~l~~~~g~~livD~-~~~~g~~~~~~~~~~~D~~ 185 (363)
T TIGR02326 107 VDTGEVEPPDVVEVEAILAADPAITHIALVHCETTTGILNPIEAVAKLAHRHGKVTIVDA-MSSFGGIPIDIAELHIDYL 185 (363)
T ss_pred EeCCCCCCCCHHHHHHHHhhCCCccEEEEEeecCCccccCcHHHHHHHHHHcCCEEEEEc-cccccCcccchhhcCccEE
Confidence 7652 3444 43 35666776664 889999999999999999999999953 4456544 24467999999
Q ss_pred EecC-ccccccCCCCCCceEEEEEchhHHhcCCCceeeeeecCCCCcceeeeccccccccccc----ccCCCccchhHHH
Q 001586 353 VGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRD----KATSNICTAQALL 427 (1049)
Q Consensus 353 vgs~-k~lg~P~~~GGP~~G~l~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irre----kaTsni~t~~~l~ 427 (1049)
++++ |+|++ +||+||++++++..+++.+...+ +.+++....+..... .-|.|+ ....
T Consensus 186 ~~s~~K~l~~-----p~G~G~l~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~ft~~~---~~~~ 247 (363)
T TIGR02326 186 ISSANKCIQG-----VPGFGFVIARQAELAACKGNARS----------LSLDLYDQWRCMEDNHGKWRFTSPT---HVVH 247 (363)
T ss_pred EecCcccccc-----CCcceEEEECHHHHHHhhcCCCc----------eeecHHHHHHHHhccCCCCCCCCcH---HHHH
Confidence 9999 65653 35689999999887765432222 222211000000000 113332 4555
Q ss_pred HHHHHHHHHHhCcc-hHHHHHHHHHHHHHHHHHHhhcCCCeEEcCCC--Ccce-EEEecCC-----HHHHHHHHHHcCCe
Q 001586 428 ANMAAMYAVYHGPE-GLKTIAQRVHGLAGTFALGLKKLGTVEVQGLP--FFDT-VKVKCAD-----AHAIASAAYKIEMN 498 (1049)
Q Consensus 428 a~~aa~y~~~~g~~-Gl~~ia~~~~~~a~~l~~~L~~~g~~~v~~~~--~~~~-v~i~~~~-----~~~v~~~L~~~gI~ 498 (1049)
++.+++ .++..+ |++++.+++.++..++++.|+++| ++++.++ .... +.|..+. ..++.+.|.++||.
T Consensus 248 al~~al--~~l~~~g~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~L~~~gi~ 324 (363)
T TIGR02326 248 AFAQAL--LELEKEGGVAARHQRYQQNQKTLVAGMRALG-FEPLLDDEIQSPIITSFYSPEDPDYRFADFYQRLKEQGFV 324 (363)
T ss_pred HHHHHH--HHHHHhhCHHHHHHHHHHHHHHHHHHHHHcC-CeeccCcccCCceEEEEECCCCCCCCHHHHHHHHHHCCEE
Confidence 665565 333333 688999999999999999999887 8876432 2222 3344432 46889999999998
Q ss_pred eeee---cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001586 499 LRVV---DSNTVTASFDETTTLEDVDKLFIVFAG 529 (1049)
Q Consensus 499 ~~~~---~~~~vris~~~~~t~edid~lv~aL~~ 529 (1049)
++.. ..+.+|++++-++|.+|+++++++|+.
T Consensus 325 v~~g~~~~~~~iRi~~~~~~~~edv~~~l~~l~~ 358 (363)
T TIGR02326 325 IYPGKVSQVDCFRIGNIGEVDAADITRLLTAIGK 358 (363)
T ss_pred EECCcCCCCCEEEEecCCCCCHHHHHHHHHHHHH
Confidence 8543 146899999888999999999999963
No 95
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.83 E-value=2.6e-18 Score=200.48 Aligned_cols=364 Identities=16% Similarity=0.161 Sum_probs=228.6
Q ss_pred CCcccCCCCCHHHHHHHHHHHhccccCcCccccccccccccCccccccccccCccc--c-------cCCCCCchhhhh--
Q 001586 560 THPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSF--A-------NIHPFAPADQAQ-- 628 (1049)
Q Consensus 560 ~~p~~~~~~se~e~~~~l~~l~~~d~~~~~~~i~lGs~t~~~~~~~~~~~~~~~~f--~-------~~~P~~p~e~~~-- 628 (1049)
.+| ..|+++..+...|.+|+..|..-...-++.| ... ..+.--.+.+.-| + +..-.|| ....
T Consensus 29 ~~p--~~g~~~~~i~~~l~~l~~~~~~~~~~~~~~g--ere--~rv~~~~~~~~~~~~~hgigr~~~l~~~q~-ka~gss 101 (444)
T TIGR03531 29 KIP--EEGWDDETIELFLHELSVMDTNNFPNNVGVG--ERE--GRVFSKLVARRHYRFCHGIGRSGDLVAPQP-KAAGSS 101 (444)
T ss_pred cCC--ccCCCHHHHHHHHHHHhcCCcCCCccccCcC--ccc--ceeechhhhhcccceecCCCCcccccccCc-cccCcc
Confidence 467 6899999999999999988854332222222 110 0000000111111 1 1223455 3221
Q ss_pred cHHHHHHHHHHHHHHhhCCCc--cccccCchH-HHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCEEE
Q 001586 629 GYQEMFNNLGEWLCTITGFDS--FSLQPNAGA-AGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIV 705 (1049)
Q Consensus 629 G~~~~i~el~~~la~l~G~~~--~~l~~~sGa-~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~Vv 705 (1049)
....+..++++++++++|.+. ..+..++|+ .+...++.+++. ++ .++++||+|...|.+..+++.+.|++++
T Consensus 102 ~~~~l~~~~e~~~~~~~G~~~~~~a~~v~~~Tg~al~laL~alr~----~~-~~gd~VI~p~~th~S~~kAi~~~G~~pv 176 (444)
T TIGR03531 102 LLYKLTNKLVKDFLKLLGLRSIKSAFVVPLATGMSLSLCLSALRH----KR-PKAKYVIWPRIDQKSCIKAISTAGFEPR 176 (444)
T ss_pred HHHHHHHHHHHHHHHHcCCCCCCEEEEECCHHHHHHHHHHHHcCC----cC-CCCCEEEEECcChHHHHHHHHHcCCeEE
Confidence 155788899999999999983 223444444 233222332221 11 1367899999989888888999999999
Q ss_pred EEcC--C-CCCCCCHHHHHHHHHhcCCCeEEEEEEcCCccc--cccccHHHHHHHHHHcCCEEEEeccccccccCc---C
Q 001586 706 SVGT--D-AKGNINIEELRKAAEANRDNLSTLMVTYPSTHG--VYEEGIDEICKIIHDNGGQVYMDGANMNAQVGL---T 777 (1049)
Q Consensus 706 ~V~~--d-~~g~iD~~~L~~~i~~~~~~taaV~it~Pn~~G--~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl---~ 777 (1049)
.|++ + +++.+|+++|+++|++...++.++++++|++++ ..+ |+++|+++|+++|+++|+|+|+.....-+ .
T Consensus 177 ~Vd~~~d~~~~~iD~e~Le~aIt~~~~kai~~Vv~Tp~t~~~g~~d-dL~eIa~la~k~gI~lIvDaAyg~~~~~~~~~~ 255 (444)
T TIGR03531 177 VIETVLDGDELTTDVEDIERAIEEIGPDNILCVLSTTSCFAPRSPD-DIEEIAKICANYDIPHIVNNAYGLQSNKYMELI 255 (444)
T ss_pred EeeeeecCcCCCcCHHHHHHHHHhccCCCEEEEEEcCCcCCCcchh-CHHHHHHHHHHcCCEEEEECcCcCcChhhhhhh
Confidence 9995 3 457899999999998433256677788887654 667 89999999999999999999875211110 0
Q ss_pred CCC-ccC-CcEEEeCCCcccccCCCCCCCceeEEEEc-ccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHH
Q 001586 778 SPG-YIG-ADVCHLNLHKTFCIPHGGGGPGMGPIGVK-KHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILP 854 (1049)
Q Consensus 778 ~Pg-~~G-aDi~~~s~hK~f~~P~g~GGPg~G~i~~~-~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~ 854 (1049)
.++ +.| +|++++++||+|.+|.+ .|+++++ +++.+.+.... .++ ... ....
T Consensus 256 ~~g~~~Grad~vv~s~hK~l~~pg~-----Gg~I~~~d~el~~~i~~~y---------~g~------~~~------s~~~ 309 (444)
T TIGR03531 256 NKAIKVGRVDAVVSSTDKNFMVPVG-----GAIIYSFDENFIQEISKSY---------PGR------ASA------SPSL 309 (444)
T ss_pred hccccccCCCeEEEeCccCCCCCCC-----EEEEEECCHHHHHHHHHhc---------cCC------CCC------hHHH
Confidence 122 344 79999999999987632 3566664 44444331100 000 011 1234
Q ss_pred HHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc-----CCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHHH
Q 001586 855 ISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-----YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMD 929 (1049)
Q Consensus 855 ~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~-----~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~ 929 (1049)
.+|+.+..+|.+|+++..++..++++++.++|+++ ..++ ..+.++. .+.+.+..+. +.++..+...|..
T Consensus 310 ~~~~~ll~~G~~g~~~li~~~~~~a~~l~~~L~~l~~~~~~~~~-~~~~n~i--s~~~~~~~~~---~~~~~~~g~~l~~ 383 (444)
T TIGR03531 310 DVLITLLSLGSKGYLELLKERKEMYKYLKELLQKLAERHGERLL-DTPENPI--SSAMTLSTLK---GKDPTMLGSMLYS 383 (444)
T ss_pred HHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcEee-cCCCCce--eEEEeccccc---ccCHHHHHHHHHh
Confidence 57889999999999999999999999999999875 2232 2222232 3444444331 3567888888988
Q ss_pred CCcccC-----CC-------C---CCC------CCEEEEEccCCCCHHHHHHHHHHHHHH
Q 001586 930 YGFHGP-----TM-------S---WPV------PGTLMIEPTESESKEELDRYCDALISI 968 (1049)
Q Consensus 930 ~Gi~~~-----~~-------~---~p~------~~~lri~~t~~~t~eeid~fv~aL~~i 968 (1049)
+++..+ +- . |.. ...+.+......+++|||.|++.|.++
T Consensus 384 ~~v~g~r~v~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~g~~~~~~~~~~~~l~~~ 443 (444)
T TIGR03531 384 RRVTGPRVVTNGDSKTVGGCEFKGYGSHTSNYPCPYITAAAAIGMTKEDVDTFVSRLEKS 443 (444)
T ss_pred CCCCCceeecCCCceEECCEEeecccccccCCCchhHHHHHHhCCcHHHHHHHHHHHhhc
Confidence 877431 11 1 110 123444445567899999999998764
No 96
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.83 E-value=1.7e-18 Score=199.84 Aligned_cols=323 Identities=13% Similarity=0.023 Sum_probs=216.9
Q ss_pred CCCCcHHHHHHHHhCC-ccccccCCChhhHhhhHHHHHHHHHHHHHHHhCCCC-cceEec-cchHHHHHHHHHHhhhccC
Q 001586 177 NTHVPPVILRNIMENP-AWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPM-SNASLL-DEGTAAAEAMAMCNNIQKG 253 (1049)
Q Consensus 177 ~~~~p~~i~~~~~~~~-~~~t~ytpyq~e~sqg~le~l~e~q~~ia~L~G~~~-~n~sl~-~~~Ta~~eA~~~a~~~~~~ 253 (1049)
|..+|+.+.+++.... +.+- ..-..++. .+.+.+.++.+++|+|++. .++.++ .+||.++|+++.++-
T Consensus 11 P~~~~~~v~~a~~~~~~~~~~-~~hr~~~f----~~~~~~~r~~l~~l~~~~~~~~v~f~~gs~T~a~~~~~~~l~---- 81 (361)
T TIGR01366 11 PSKVRLEQLQALTTTAASLFG-TSHRQAPV----KNLVGRVREGLAELFSLPDGYEVILGNGGATAFWDAATFGLI---- 81 (361)
T ss_pred CcCCCHHHHHHHHhcCccccc-cCcCChHH----HHHHHHHHHHHHHHhCCCCCceEEEECCchhHHHHHHHHhcc----
Confidence 3457777765544321 0100 01223332 4678889999999999964 367776 559999998877652
Q ss_pred CCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCcc---hhhc-cCCCEeEEEEEc-CCCCeeeccHHHHHHHHHhCCcE
Q 001586 254 KKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK---DIDY-KSGDVCGVLVQY-PGTEGEVLDYGDFIKNAHANGVK 328 (1049)
Q Consensus 254 ~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~~~---~l~~-l~~~t~~V~v~~-pn~~G~i~di~~I~~~ah~~gal 328 (1049)
.++.++++...|.+...-+-.++...+ ++.+++.+ +++. ++++++.|++++ +|.+|.+.|+++| +|++|++
T Consensus 82 ~~~~l~i~~G~~~~~~~~~a~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~lV~~~h~et~tG~~~pi~~I---~~~~g~~ 157 (361)
T TIGR01366 82 EKKSLHLSFGEFSSKFAKAVKLAPWLG-EPIIVTADPGSAPEPQADPGVDVIAWAHNETSTGVAVPVRRP---EGSDDAL 157 (361)
T ss_pred cccccEEecCHHHHHHHHHHHhhhccC-CceEEecCCCCCCCCccCCCCCEEEEcccCCccceecccccc---cccCCCe
Confidence 224456777888776665544322223 44555432 3333 567899998876 6999999999998 5899999
Q ss_pred EEEEeccccccCCC-CCCcccceEEEecCcc-ccccCCCCCCceEEEEEchhHHhcCCCceeeeeecCCCCcceeeeccc
Q 001586 329 VVMATDLLALTILK-PPGELGADIVVGSAQR-FGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQT 406 (1049)
Q Consensus 329 liV~a~~~alg~l~-~p~~~GaDivvgs~k~-lg~P~~~GGP~~G~l~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqt 406 (1049)
++|++ ..++|... +.. .+|++++++|| ||.| |+++++++++++.+++.+...|.. +.+ +.+++..
T Consensus 158 ~iVDa-vqs~g~~~idv~--~~D~~~~s~~K~lg~~-----~Gl~~~~~s~~~~~~~~~~~~~~~----~~p-~~~d~~~ 224 (361)
T TIGR01366 158 VVIDA-TSGAGGLPVDIA--ETDVYYFAPQKNFASD-----GGLWLAIMSPAALERIEAIAASGR----WVP-EFLSLPT 224 (361)
T ss_pred EEEEc-CccccCCCCCHH--HCCEEEEEchhhcCCC-----CceEEEEECHHHHhhhhcccCCCC----CCc-hhhhHHH
Confidence 99954 23555432 223 28999999944 4433 358888999998877764433310 111 2344322
Q ss_pred ccccccccccCCCccchhHHHHHHHHHHHHHhCcc-hHHHHHHHHHHHHHHHHHHhhcCCCeEEcC-CC--Cc---ceEE
Q 001586 407 REQHIRRDKATSNICTAQALLANMAAMYAVYHGPE-GLKTIAQRVHGLAGTFALGLKKLGTVEVQG-LP--FF---DTVK 479 (1049)
Q Consensus 407 req~irrekaTsni~t~~~l~a~~aa~y~~~~g~~-Gl~~ia~~~~~~a~~l~~~L~~~g~~~v~~-~~--~~---~~v~ 479 (1049)
.. ..+.|.+|.|......++++.+++ .++..+ |++.+.+|..+++++++++|.+.++++++. .. .. .+|+
T Consensus 225 ~~-~~~~~~~t~~tp~i~~i~~l~~al--~~l~~~gg~e~~~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~v~~v~ 301 (361)
T TIGR01366 225 AV-DNSLKNQTYNTPAIATLALLAEQI--DWMNGNGGLDWAVARTADSSSRLYSWAQERPYATPFVTDPGKRSQVVGTID 301 (361)
T ss_pred HH-hccccCCCCCCchHHHHHHHHHHH--HHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhcccceEEEE
Confidence 21 123456888887778888888887 666666 699999999999999999999987566653 21 11 2344
Q ss_pred EecCC--HHHHHHHHHHcCCeeee----ecCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001586 480 VKCAD--AHAIASAAYKIEMNLRV----VDSNTVTASFDETTTLEDVDKLFIVFAG 529 (1049)
Q Consensus 480 i~~~~--~~~v~~~L~~~gI~~~~----~~~~~vris~~~~~t~edid~lv~aL~~ 529 (1049)
+. ++ ..++.+.|.++||.+.. +..+.+|+|++.++|.+|||+|+++|+.
T Consensus 302 ~~-~g~~~~~v~~~L~~~gI~i~~~~~~l~~~~vRis~~~~~t~~di~~l~~al~~ 356 (361)
T TIGR01366 302 FV-DDIDAATVAKILRANGIVDTEPYRKLGRNQLRVAMFPAIDPDDVEALTECVDW 356 (361)
T ss_pred CC-CccCHHHHHHHHHHCCCeeccCccccCCCcEEEEcCCCCCHHHHHHHHHHHHH
Confidence 42 33 77899999999998743 2246799999999999999999999974
No 97
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.83 E-value=3.1e-18 Score=197.23 Aligned_cols=263 Identities=11% Similarity=0.105 Sum_probs=192.6
Q ss_pred hhhHHHHHHHHHHHHHHHhCCCCcceEeccchHHHHHHHHHHhhh-ccCCC-CEEEEcCCCCHHHHHHHHHhhcCCCeEE
Q 001586 206 AQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNI-QKGKK-KTFIIASNCHPQTIDICITRADGFDIKV 283 (1049)
Q Consensus 206 sqg~le~l~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a~~~-~~~~g-~~Vlv~~~~Hps~~~~l~~~a~~~gi~v 283 (1049)
+....+.+.++++.+++++|++..++.+++|+|.+++.++.++.. ..+++ ++|+++..+||++...++.. +..|+++
T Consensus 37 ~~~~~~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~~l~~l~~~~~~~g~~~vi~~~~~~~s~~~~~~~~-~~~G~~v 115 (353)
T TIGR03235 37 GHNAKKAVERARKQVAEALGADTEEVIFTSGATESNNLAILGLARAGEQKGKKHIITSAIEHPAVLEPIRAL-ERNGFTV 115 (353)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhcccCCCCeeeEcccccHHHHHHHHHH-HhcCCEE
Confidence 334556788999999999999988899999999887776665432 11234 78999999999999998764 4579999
Q ss_pred EEeCc--------chhhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCC-CCCcccceEE
Q 001586 284 VVSDL--------KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIV 352 (1049)
Q Consensus 284 ~~v~~--------~~l~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~-~p~~~GaDiv 352 (1049)
+.++. +++++ +++++++|+++++ |++|.+.|+++|+++||++|++++|+. .+++|... +..++|+|++
T Consensus 116 ~~v~~~~~~~~d~~~l~~~l~~~~~lv~~~~~~n~tG~~~~~~~I~~l~~~~~~~~ivD~-a~~~g~~~~~~~~~~~D~~ 194 (353)
T TIGR03235 116 TYLPVDESGRIDVDELADAIRPDTLLVSIMHVNNETGSIQPIREIAEVLEAHEAFFHVDA-AQVVGKITVDLSADRIDLI 194 (353)
T ss_pred EEEccCCCCcCCHHHHHHhCCCCCEEEEEEcccCCceeccCHHHHHHHHHHcCCEEEEEc-hhhcCCccccccccCCCEE
Confidence 88765 34555 6778999999987 789999999999999999999999942 44555442 4467899999
Q ss_pred EecCccccccCCCCCCceEEEEEchhHHhc--CCCceeeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHH
Q 001586 353 VGSAQRFGVPMGYGGPHAAFLATSQEYKRM--MPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANM 430 (1049)
Q Consensus 353 vgs~k~lg~P~~~GGP~~G~l~~~~~l~~~--lpgrivG~s~d~~g~~~~~l~lqtreq~irrekaTsni~t~~~l~a~~ 430 (1049)
+++++|+.+| |+.|+++++++.... +.+.+.| +. +..|.+.+|.|+ ..++++.
T Consensus 195 ~~s~~K~~gp-----~g~g~l~~~~~~~~~~~~~~~~~~------~~-----------~~~~~~~gt~~~---~~~~al~ 249 (353)
T TIGR03235 195 SCSGHKIYGP-----KGIGALVIRKRGKPKAPLKPIMFG------GG-----------QERGLRPGTLPV---HLIVGMG 249 (353)
T ss_pred EeehhhcCCC-----CceEEEEEccCcccccccCceeeC------CC-----------CcCccccCCCCh---HHHHHHH
Confidence 9999555444 358999999875432 3332222 10 112346788888 4566666
Q ss_pred HHHHHHHhCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEcCCC---CcceEEEecCC--HHHHHHHHHHcCCeee
Q 001586 431 AAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLP---FFDTVKVKCAD--AHAIASAAYKIEMNLR 500 (1049)
Q Consensus 431 aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~g~~~v~~~~---~~~~v~i~~~~--~~~v~~~L~~~gI~~~ 500 (1049)
+++ .++ .+|++++.+++.+++++++++|++.| ++++.++ ....++|..++ .+++.+.|.+ +|.++
T Consensus 250 ~al--~~~-~~~~~~~~~~~~~l~~~l~~~l~~~g-~~~~~~~~~~~~~i~~~~~~~~~~~~v~~~L~~-~i~v~ 319 (353)
T TIGR03235 250 EAA--EIA-RRNAQAWEVKLRAMRNQLRDALQTLG-VKLNGDPAETIPHILNFSIDGVNSEALIVNLRA-DAAVS 319 (353)
T ss_pred HHH--HHH-HhhHHHHHHHHHHHHHHHHHHhccCC-eEEeCCcccccCCEEEEEeCCcCHHHHHHHHhC-CeEEE
Confidence 666 232 35889999999999999999998877 9987432 12345666565 6789999965 77664
No 98
>PLN03032 serine decarboxylase; Provisional
Probab=99.82 E-value=3.1e-18 Score=196.90 Aligned_cols=279 Identities=14% Similarity=0.060 Sum_probs=192.6
Q ss_pred hhHHHHHHHHHHHHHHHhCCCCcce--EeccchHHHHHHHHHHhhhcc--CCCCEEEEcCCCCHHHHHHHHHhhcCCCeE
Q 001586 207 QGRLESLLNFQTMIADLTGLPMSNA--SLLDEGTAAAEAMAMCNNIQK--GKKKTFIIASNCHPQTIDICITRADGFDIK 282 (1049)
Q Consensus 207 qg~le~l~e~q~~ia~L~G~~~~n~--sl~~~~Ta~~eA~~~a~~~~~--~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~ 282 (1049)
+...+.+.+...++++|+|+++..+ .+++||| ||.++++...+ .++.+|+++..+|+++.+.++.+ |++
T Consensus 62 ~~a~~~e~~v~~~ia~llg~~~~~~~G~fTsGGT---EaNl~al~~ar~~~~~~~vi~s~~~H~Sv~kaa~~l----g~~ 134 (374)
T PLN03032 62 VHSRQFEVGVLDWFARLWELEKDEYWGYITTCGT---EGNLHGILVGREVFPDGILYASRESHYSVFKAARMY----RME 134 (374)
T ss_pred ccHHHHHHHHHHHHHHHhCCCCccCCEEEeCchH---HHHHHHHHHHHHhCCCcEEEeCCCceeHHHHHHHHc----CCC
Confidence 4567888899999999999987654 8899998 55555443211 14468999999999999987653 444
Q ss_pred EEEeCc--------chhhc-cCC---CEeEEEEEcC-CCCeeeccHHHHHHHHHhCC-----cEEEEEeccccccCCC--
Q 001586 283 VVVSDL--------KDIDY-KSG---DVCGVLVQYP-GTEGEVLDYGDFIKNAHANG-----VKVVMATDLLALTILK-- 342 (1049)
Q Consensus 283 v~~v~~--------~~l~~-l~~---~t~~V~v~~p-n~~G~i~di~~I~~~ah~~g-----alliV~a~~~alg~l~-- 342 (1049)
++.+++ ++|++ +.+ ++.+|+++.. |.+|.|+|+++|+++|+++| ++++|++- .+.+.+.
T Consensus 135 ~~~V~~d~~g~id~~~L~~~i~~~~~~~~lvv~tagtt~tG~idpi~eI~~i~~~~g~~~~~~~lHvDaA-~gg~~~p~~ 213 (374)
T PLN03032 135 AVKVPTLPSGEIDYDDLERALAKNRDKPAILNVNIGTTVKGAVDDLDRILRILKELGYTEDRFYIHCDGA-LFGLMMPFV 213 (374)
T ss_pred CeEeeeCCCCcCcHHHHHHHHHHcCCCCEEEEEEecCcCCccCCCHHHHHHHHHHhCCCCCCeeEEEEcc-chhhhhhcc
Confidence 444443 45655 544 4778888875 68999999999999999997 48999531 1222111
Q ss_pred ---C--CCcccceEEEecCccccc-cCCCCCCceEEEEEchhHHhcCCC--ceeeeeecCCCCcceeeeccccccccccc
Q 001586 343 ---P--PGELGADIVVGSAQRFGV-PMGYGGPHAAFLATSQEYKRMMPG--RIVGVSIDSSGKPALRVAMQTREQHIRRD 414 (1049)
Q Consensus 343 ---~--p~~~GaDivvgs~k~lg~-P~~~GGP~~G~l~~~~~l~~~lpg--rivG~s~d~~g~~~~~l~lqtreq~irre 414 (1049)
+ ....++|.+..+++||++ |++ +|++++++++.+.+.- ..++ ...+.+.
T Consensus 214 ~~~~~~~~~~~vDSis~s~HK~~g~P~g-----~G~ll~r~~~~~~~~~~~~Yl~-------~~d~ti~----------- 270 (374)
T PLN03032 214 SRAPEVTFRKPIGSVSVSGHKFLGCPMP-----CGVALTRKKHVKALSQNVEYLN-------SRDATIM----------- 270 (374)
T ss_pred CCCcccCCCcCCcEEEECcccccCCCcC-----eEEEEEEchhhHhhccCCcccC-------CCCCccc-----------
Confidence 0 123589999999966654 764 6789999877665521 1111 0001111
Q ss_pred ccCCCccchhHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEcCCCCcceEEEecCCHHHHHHHHHH
Q 001586 415 KATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYK 494 (1049)
Q Consensus 415 kaTsni~t~~~l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~g~~~v~~~~~~~~v~i~~~~~~~v~~~L~~ 494 (1049)
+|-+-. ..+++-++ +.++|.+|++++.+++.++|+|+.++|++.| ++++..|...+|+|..+.... + .
T Consensus 271 -gSR~g~---~~l~~w~~--l~~~G~~g~~~~~~~~~~~a~~l~~~l~~~~-~~~~~~p~~~~V~f~~~~~~~----~-~ 338 (374)
T PLN03032 271 -GSRNGH---APLYLWYT--LRRKGYRGIKRDVQHCMRNAHYLKDRLTEAG-LTCRLNELSSTVVFERPMDEA----F-I 338 (374)
T ss_pred -CCCchH---HHHHHHHH--HHHhCHHHHHHHHHHHHHHHHHHHHHHHhCC-CcEEECCCceEEEEcCCCcHh----H-h
Confidence 111111 11122222 5899999999999999999999999999987 887655656677777653222 2 2
Q ss_pred cCCeeeeecCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001586 495 IEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAG 529 (1049)
Q Consensus 495 ~gI~~~~~~~~~vris~~~~~t~edid~lv~aL~~ 529 (1049)
+|+.+.. ..+.++++++..+|++.||+|++.|..
T Consensus 339 ~~w~l~~-~~~~~hi~vm~~~~~~~id~fi~dl~~ 372 (374)
T PLN03032 339 KKWQLAC-EGDIAHVVVMPNVTVEKLDEFVEELVE 372 (374)
T ss_pred heeeecc-cCCEEEEEECCCCCHHHHHHHHHHHhc
Confidence 5787765 346899999999999999999999864
No 99
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.82 E-value=7.6e-18 Score=195.10 Aligned_cols=319 Identities=13% Similarity=0.130 Sum_probs=212.1
Q ss_pred cCCCCCCCCCcHHHHHHHHhCCccccccCCChhhHhhhHHHHHHHHHHHHHHHhCCCC--cceEeccchHHHHHHHHHHh
Q 001586 171 IGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPM--SNASLLDEGTAAAEAMAMCN 248 (1049)
Q Consensus 171 lG~g~y~~~~p~~i~~~~~~~~~~~t~ytpyq~e~sqg~le~l~e~q~~ia~L~G~~~--~n~sl~~~~Ta~~eA~~~a~ 248 (1049)
.+.|.. .+++.+.+.+.. + | .. +.++ ..+.+.++++.+++++|.+. ..+.++.+||.+.++++.++
T Consensus 9 ~~pgP~--~~~~~~~~a~~~-~-~-~~---~~~~----~~~~~~~~~~~l~~l~~~~~~~~~i~~~~~gt~~l~~~~~~l 76 (368)
T PRK13479 9 LTPGPL--TTSRTVREAMLR-D-W-GS---WDDD----FNALTASVRAKLVAIATGEEGYTCVPLQGSGTFSVEAAIGSL 76 (368)
T ss_pred ecCCCC--CCCHHHHHHhCC-C-C-CC---CChH----HHHHHHHHHHHHHHHhCCCCCceEEEEcCCcHHHHHHHHHhc
Confidence 355543 467777654444 2 4 21 2222 22467888999999999965 34778899999888887765
Q ss_pred hhccCCCCEEEEcCC-CCHHHHHHHHHhhcCCCeEEEEeCcc--------hhhc-cC--CCEeEEEEEcC-CCCeeeccH
Q 001586 249 NIQKGKKKTFIIASN-CHPQTIDICITRADGFDIKVVVSDLK--------DIDY-KS--GDVCGVLVQYP-GTEGEVLDY 315 (1049)
Q Consensus 249 ~~~~~~g~~Vlv~~~-~Hps~~~~l~~~a~~~gi~v~~v~~~--------~l~~-l~--~~t~~V~v~~p-n~~G~i~di 315 (1049)
. . ++++|++... .++.. +...++..|++++.++.+ ++++ +. ++++.|++.+| |++|.+.|+
T Consensus 77 ~-~--~~~~vlv~~~~~~~~~---~~~~~~~~g~~~~~i~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~~ 150 (368)
T PRK13479 77 V-P--RDGKVLVPDNGAYGAR---IAQIAEYLGIAHVVLDTGEDEPPDAAEVEAALAADPRITHVALVHCETTTGILNPL 150 (368)
T ss_pred c-C--CCCeEEEEeCCchHHH---HHHHHHHcCCcEEEEECCCCCCCCHHHHHHHHHhCCCCcEEEEEcccCccccccCH
Confidence 3 2 6677777654 44443 223355678888887652 3333 43 45678888888 689999999
Q ss_pred HHHHHHHHhCCcEEEEEeccccccCC-CCCCcccceEEEecC-ccccccCCCCCCceEEEEEchhHHhcCCCceeeeeec
Q 001586 316 GDFIKNAHANGVKVVMATDLLALTIL-KPPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSID 393 (1049)
Q Consensus 316 ~~I~~~ah~~galliV~a~~~alg~l-~~p~~~GaDivvgs~-k~lg~P~~~GGP~~G~l~~~~~l~~~lpgrivG~s~d 393 (1049)
++|+++||++|++++|+ ...+++.. .+..++++|++++++ |+|++ .||+||+++++++++.+......
T Consensus 151 ~~i~~l~~~~~~~livD-a~~~~g~~~~~~~~~~~d~~v~s~~K~l~g-----~~G~G~l~~~~~~~~~~~~~~~~---- 220 (368)
T PRK13479 151 DEIAAVAKRHGKRLIVD-AMSSFGAIPIDIAELGIDALISSANKCIEG-----VPGFGFVIARRSELEACKGNSRS---- 220 (368)
T ss_pred HHHHHHHHHcCCEEEEE-cccccCCccccccccCceEEEecCcccccc-----CCCceEEEECHHHHHHhhcCCCC----
Confidence 99999999999999996 34455543 234678999999998 66753 45689999999988777542211
Q ss_pred CCCCcceeeecccccccccccc---cCCCccchhHHHHHHHHHHHHHhCc-chHHHHHHHHHHHHHHHHHHhhcCCCeEE
Q 001586 394 SSGKPALRVAMQTREQHIRRDK---ATSNICTAQALLANMAAMYAVYHGP-EGLKTIAQRVHGLAGTFALGLKKLGTVEV 469 (1049)
Q Consensus 394 ~~g~~~~~l~lqtreq~irrek---aTsni~t~~~l~a~~aa~y~~~~g~-~Gl~~ia~~~~~~a~~l~~~L~~~g~~~v 469 (1049)
+.+++........+.. -|.|+ ..++++.+++ .++.. .|++++.+++.++++++++.|+++| +++
T Consensus 221 ------~~~~~~~~~~~~~~~~~~~~t~~~---~~~~~l~~al--~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~ 288 (368)
T PRK13479 221 ------LSLDLYDQWAYMEKTGQWRFTPPT---HVVAAFYQAL--LELEEEGGVPARGARYANNQRTLVAGMRALG-FEP 288 (368)
T ss_pred ------eeecHHHHHhhhcccCCCCCCCcH---HHHHHHHHHH--HHHHHhhCHHHHHHHHHHHHHHHHHHHHHcC-Ccc
Confidence 2222110000000001 14443 4555555555 33323 3588888999999999999999997 887
Q ss_pred cCCC--Ccc-eEEEecCC-----HHHHHHHHHHcCCeeeeec---CCeEEEEeccCCCHHHHHHHHHHHhC
Q 001586 470 QGLP--FFD-TVKVKCAD-----AHAIASAAYKIEMNLRVVD---SNTVTASFDETTTLEDVDKLFIVFAG 529 (1049)
Q Consensus 470 ~~~~--~~~-~v~i~~~~-----~~~v~~~L~~~gI~~~~~~---~~~vris~~~~~t~edid~lv~aL~~ 529 (1049)
+.++ ..+ .+.|..+. ..++.++|.++||.++... .+.+|++..-++|.+|+++++++|+.
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gi~v~~g~~~~~~~iRis~~~~~t~edi~~~l~~L~~ 359 (368)
T PRK13479 289 LLDAEIQSPIIVTFHAPADPAYDFKEFYERLKEQGFVIYPGKLTQVDTFRIGCIGDVDAADIRRLVAAIAE 359 (368)
T ss_pred cCCchhcCceEEEEECCCCCCcCHHHHHHHHHHCCEEEecCCCCCCCEEEEecCCCCCHHHHHHHHHHHHH
Confidence 6322 111 24444331 4789999999999886421 35899998889999999999999963
No 100
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.82 E-value=1.1e-17 Score=198.57 Aligned_cols=313 Identities=18% Similarity=0.137 Sum_probs=202.9
Q ss_pred HHHHHHHHHHHhhCCCc----cccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHH------H--hc
Q 001586 633 MFNNLGEWLCTITGFDS----FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATA------A--MC 700 (1049)
Q Consensus 633 ~i~el~~~la~l~G~~~----~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a------~--~~ 700 (1049)
++...++...++++.+. .++++.||++++++++.++. +++|+|+..+-.||.|..-+ . ..
T Consensus 81 lE~~~~~~~~~~f~~~~~~~~~nv~~~SG~~AN~av~~aL~--------~pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~ 152 (475)
T PLN03226 81 IETLCQKRALEAFRLDPEKWGVNVQPLSGSPANFAVYTALL--------QPHDRIMGLDLPHGGHLSHGYQTDGKKISAT 152 (475)
T ss_pred HHHHHHHHHHHHhCCCcceeEEecCcCchHHHHHHHHHHhC--------CCCCEEEECCCCcCcchhhhhhhcccccccc
Confidence 33334557888888776 46788999999987777653 25788887444444443211 1 12
Q ss_pred CCEEE--EEcCC-CCCCCCHHHHHHHHHhcCCCeEEEEEEcCCccccccccHHHHHHHHHHcCCEEEEeccccccccCcC
Q 001586 701 GMKIV--SVGTD-AKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT 777 (1049)
Q Consensus 701 G~~Vv--~V~~d-~~g~iD~~~L~~~i~~~~~~taaV~it~Pn~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~ 777 (1049)
+..+. ..+.+ ++|.+|+++|++++.++ +++.|++.. +.+|... |+++|+++||++|++++||+||..++.+..
T Consensus 153 ~~~~~~~~y~~~~~~g~iD~d~Le~~l~~~--~pklIv~~~-S~~s~~~-D~a~i~~ia~~~ga~LlvD~AH~~Gli~~~ 228 (475)
T PLN03226 153 SIYFESMPYRLDESTGLIDYDKLEKKAMLF--RPKLIIAGA-SAYPRDW-DYARMRKIADKVGALLMCDMAHISGLVAAQ 228 (475)
T ss_pred eEEEEeeeeeecCCCCCcCHHHHHHHHhhc--CCeEEEEec-CcCCCcc-CHHHHHHHHHHcCCEEEEEchhhhCcccCC
Confidence 22222 33344 45899999999999753 455555533 4577666 899999999999999999999876554322
Q ss_pred ---CCCccCCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCC---CCCCCCCCCCCCCccchhhHH
Q 001586 778 ---SPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGI---PAPEKSQPLGTIAAAPWGSAL 851 (1049)
Q Consensus 778 ---~Pg~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~---~~~~~~~~t~~i~sa~~g~~~ 851 (1049)
.|.+ ++|++++++|||| +||..|+|++++.+.+.+.+...+. .+. ....+. ....+++ +..
T Consensus 229 ~~~~p~~-~~Div~~t~hK~L------~GP~Gg~I~~~~~~~~~~~~g~~~~-~d~~~~i~~a~~---~~~~g~p--~~~ 295 (475)
T PLN03226 229 EAASPFE-YCDVVTTTTHKSL------RGPRGGMIFFRKGPKPPKGQGEGAV-YDYEDKINFAVF---PGLQGGP--HNH 295 (475)
T ss_pred CCCCCCC-CCeEEEecCcccc------cCCCceEEEEchhhcccccCCCccH-HHHHHHhccccC---CccCCCc--hHH
Confidence 3333 7999999999999 4676689998876554332221110 000 000000 0111111 112
Q ss_pred HHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHHHC
Q 001586 852 ILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDY 930 (1049)
Q Consensus 852 ~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~-~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~ 930 (1049)
.+++..+.+..+-..|+++..++...++++|++.|++. +++...+ ...|.+++++.+ .+++..++.+.|.+.
T Consensus 296 ~iaal~aAl~~i~~~~~~~~~~~~~~na~~L~~~L~~~G~~l~~~~---t~~hi~lv~~~~----~gi~~~~~~~~L~~~ 368 (475)
T PLN03226 296 TIAALAVALKQAMTPEFKAYQKQVKANAAALANRLMSKGYKLVTGG---TDNHLVLWDLRP----LGLTGSRVEKVLDLA 368 (475)
T ss_pred HHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHhCCCEEEcCC---CCCCEEEEEccC----CCCCHHHHHHHHHHC
Confidence 23334455666666778888889999999999999875 6665322 224567788753 367888899999999
Q ss_pred CcccCCC--CC---C-CCCEEEE----EccCCCCHHHHHHHHHHHHHHHHHHHHhhc
Q 001586 931 GFHGPTM--SW---P-VPGTLMI----EPTESESKEELDRYCDALISIREEIAQIEN 977 (1049)
Q Consensus 931 Gi~~~~~--~~---p-~~~~lri----~~t~~~t~eeid~fv~aL~~i~~~i~~i~~ 977 (1049)
||.+..- .+ | .+..+|+ -.+...+++|++++.+.|.++++.+..+.+
T Consensus 369 ~I~~nk~~~p~~~~~~~~~giRiGt~~lt~~g~~~~d~~~ia~~i~~~~~~~~~~~~ 425 (475)
T PLN03226 369 HITLNKNAVPGDSSALVPGGVRIGTPAMTSRGLVEKDFEKVAEFLHRAVTIALKIQK 425 (475)
T ss_pred CCEECCCCCCCCcccCCCCCcccCcHHHHHCCCCHHHHHHHHHHHHHHHHHhhhhhh
Confidence 9987531 11 1 2466787 445567889999999999999887655433
No 101
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=99.81 E-value=6.2e-18 Score=203.55 Aligned_cols=343 Identities=16% Similarity=0.157 Sum_probs=215.3
Q ss_pred CHHHHHHHHHHHhccccCcCccc-cccccc-cccC-ccccccccccCcccccCCCCCchhhhhcHHHHHHHHHHHHHHhh
Q 001586 569 TEHELLRYIHLLQSKELSLCHSM-IPLGSC-TMKL-NATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTIT 645 (1049)
Q Consensus 569 se~e~~~~l~~l~~~d~~~~~~~-i~lGs~-t~~~-~~~~~~~~~~~~~f~~~~P~~p~e~~~G~~~~i~el~~~la~l~ 645 (1049)
+-.++++.+.+.-.++....++. ..+|+- +..+ ++..-.... ...|-+-.. .|++++..+++.++.+|+|+++
T Consensus 61 ~~~~~l~~l~~~l~~~sv~~~~P~ry~ghm~~~~~~paila~~~a---~~~N~n~~~-~e~SP~~t~lE~~vi~~la~l~ 136 (608)
T TIGR03811 61 NMKDVLDELSSRLRTESVPWHSAGRYWGHMNSETLMPAILAYNYA---MLWNGNNVA-YESSPATSQMEEEVGKEFATLM 136 (608)
T ss_pred CHHHHHHHHHHHHhcCCCCCCCccceEEECcCCCCHHHHHHHHHH---HHhCCCCCc-cccCchHHHHHHHHHHHHHHHh
Confidence 56778888877554443223333 446652 1111 111111100 111211122 2788899999999999999999
Q ss_pred CCCcc-ccccCchHHHHHHHHHHHHHHHH-----hcCC------------------------------------------
Q 001586 646 GFDSF-SLQPNAGAAGEYAGLMVIRAYHK-----ARGD------------------------------------------ 677 (1049)
Q Consensus 646 G~~~~-~l~~~sGa~ge~a~l~air~y~~-----~~G~------------------------------------------ 677 (1049)
|++.. -....+|+.+++.++.++|.... ..+.
T Consensus 137 G~~~~~G~~TsGGT~ANl~aL~~AR~~k~~p~a~~~~~~~~~~~~~~w~l~n~~~~~~~~l~~~~~~~~~~~~~~~~~~g 216 (608)
T TIGR03811 137 GYKNGWGHIVADGSLANLEGLWYARNIKSLPFAMKEVKPELVAGKSDWELLNMPTKEIMDLLESAGDQIDEIKAHSARSG 216 (608)
T ss_pred CCCCCCeEEeCChHHHHHHHHHHHHHhhhccchhhhccccccccccchhhcccccccccccccccccchhhhhhhccccc
Confidence 99864 24566788888878888775320 0000
Q ss_pred --CCCC-EEEEcCCCCCccHHHHHhcCC---EEEEEcCCCCCCCCHHHHHHHHHhc---CCCeEEEEEEcCCc-cccccc
Q 001586 678 --HHRN-VCIIPVSAHGTNPATAAMCGM---KIVSVGTDAKGNINIEELRKAAEAN---RDNLSTLMVTYPST-HGVYEE 747 (1049)
Q Consensus 678 --~~r~-~VLip~saHg~~pa~a~~~G~---~Vv~V~~d~~g~iD~~~L~~~i~~~---~~~taaV~it~Pn~-~G~i~~ 747 (1049)
..+. ++++|.++|-+.++++.+.|+ .|+.||+|+++++|+++|+++|++. +..+.+|+.+..+| +|.||
T Consensus 217 ~~~~~~~~vl~s~~aHyS~~KAa~ilGlG~~~vv~VpvD~~~rmd~~~L~~~I~~~~~~g~p~~~VVataGTT~~GaiD- 295 (608)
T TIGR03811 217 KDLQKLGKWLVPQTKHYSWLKAADIIGIGLDQVIPVPVDSNYRMDINELEKIIRKLAAEKTPILGVVGVVGSTEEGAVD- 295 (608)
T ss_pred cccccceEEEECCCccHHHHHHHHHcCCCcccEEEeecCCCCcCCHHHHHHHHHHHHhcCCCeEEEEEEcCCcCCcccC-
Confidence 0011 688999999999999999999 6999999999999999999999742 22467788888876 99999
Q ss_pred cHHHHHHHH---HHcCC--EEEEeccccccc-cCcCC-----------------------------C-------CccCCc
Q 001586 748 GIDEICKII---HDNGG--QVYMDGANMNAQ-VGLTS-----------------------------P-------GYIGAD 785 (1049)
Q Consensus 748 di~eI~~la---h~~G~--ll~vD~A~~~a~-~gl~~-----------------------------P-------g~~GaD 785 (1049)
||++|+++| +++|+ ++|||||..... ..+.. + |-.++|
T Consensus 296 pl~eI~~l~~~~~~~gl~~~lHVDAAyGG~~~~l~~~~~~~~~p~~~~~~~~~~~~~f~~~~~~l~~~~~~~l~gle~AD 375 (608)
T TIGR03811 296 GIDKIVALRNKLMKEGIYFYLHVDAAYGGYGRAIFLDEDDNFIPYDDLQEVHAEYGVFTEKKEYISREVYNAYKAISEAE 375 (608)
T ss_pred CHHHHHHHHHHHHHcCCceeEeeeccccchhhhhhccccccccccchhhcccccccccccccccccHhHHHHHhcCcCce
Confidence 799999999 67898 699999753211 00111 0 224799
Q ss_pred EEEeCCCcccccCCCCCCCceeEEEEccc-ccccCCCC--ccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHH
Q 001586 786 VCHLNLHKTFCIPHGGGGPGMGPIGVKKH-LAPFLPSH--PVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAM 862 (1049)
Q Consensus 786 i~~~s~hK~f~~P~g~GGPg~G~i~~~~~-l~~~lpg~--~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~ 862 (1049)
.++.++||++.+|+++| .+++|+. +...+.-. .+..... .... .-....+.++..| ..++..|+.++.
T Consensus 376 SItvDpHK~g~~Py~~G-----~ll~Rd~~~~~~~~~~a~Yl~~~~~-~~p~-~~g~~~legSR~g--a~AlklW~~lr~ 446 (608)
T TIGR03811 376 SVTIDPHKMGYIPYSAG-----GIVIQDIRMRDVISYFATYVFEKGA-DIPA-LLGAYILEGSKAG--ATAASVWAAHKV 446 (608)
T ss_pred EEEeCcccccccCCCeE-----EEEEeCHHHHHHHhcCcchhccccc-cCcc-cccccceecCCcc--HHHHHHHHHHHH
Confidence 99999999999887764 6777753 22221110 0000000 0000 0000111111222 345678999999
Q ss_pred H--chhhHHHHHHHHHHHHHHHHHHHhcc--------CCeeeccCCCceeeEEEEeccCccccCCC----CHHHHHHHHH
Q 001586 863 M--GSKGLTEASKIAILNANYMAKRLEKH--------YPILFRGVNGTVAHEFIVDLRGLKNTAGI----EPEDVAKRLM 928 (1049)
Q Consensus 863 l--G~eGl~~~~~~~~~~a~yL~~~L~~~--------~~v~~~g~~g~~~~e~iv~~~~~~~~~g~----~~~~v~k~L~ 928 (1049)
+ |.+||.++.++++++|+++.+.|++. +++.... .|.++.++|.+.+ .|. ..+++.+++.
T Consensus 447 l~~G~~Gyg~~i~~~i~~A~~~~~~L~~~~~~~~~~~~el~~~~--~pdlniV~Fr~~~----~g~~~l~~~n~ln~~i~ 520 (608)
T TIGR03811 447 LPLNVTGYGKLIGASIEGAHRFYDFLNNLEFKVGDKEIEVHPLT--KPDFNMVDYVFNE----KGNDDLVKMNKLNHAFY 520 (608)
T ss_pred HhcCHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCeeEEecC--CCCcceEEEEEec----CCCccHHHHHHHHHHHH
Confidence 8 99999999999999999999999873 2221011 2445556666532 122 2566777777
Q ss_pred HCC
Q 001586 929 DYG 931 (1049)
Q Consensus 929 ~~G 931 (1049)
++.
T Consensus 521 ~~~ 523 (608)
T TIGR03811 521 DYA 523 (608)
T ss_pred Hhh
Confidence 653
No 102
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.81 E-value=1.7e-17 Score=190.52 Aligned_cols=317 Identities=14% Similarity=0.133 Sum_probs=208.8
Q ss_pred CCCCcHHHHHHHHhCCccccccCCChhhHhhhHHHHHHHHHHHHHHHhCCCCc--ceEeccchHHHHHHHHHHhhhccCC
Q 001586 177 NTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMS--NASLLDEGTAAAEAMAMCNNIQKGK 254 (1049)
Q Consensus 177 ~~~~p~~i~~~~~~~~~~~t~ytpyq~e~sqg~le~l~e~q~~ia~L~G~~~~--n~sl~~~~Ta~~eA~~~a~~~~~~~ 254 (1049)
|..+++.+.+++.. .| .-+.++ ..+.+.++++++++++|++.. .+.++.+||.++++++.++. . +
T Consensus 7 p~~~~~~~~~~~~~--~~----~~~~~~----~~~~~~~~~~~la~~~~~~~~~~~i~~~~~gt~~l~~~~~~~~-~--~ 73 (355)
T TIGR03301 7 PLSTSATVRDAMLV--DW----CHWDSE----FNDVTDQVRDRLLALAGGDDNHTCVLLQGSGTFAVEATIGSLV-P--R 73 (355)
T ss_pred CCCCCHHHHHHhhh--hc----cCCCHH----HHHHHHHHHHHHHHHhcCCCCCcEEEEeCCcHHHHHHHHHhcc-C--C
Confidence 34577777644443 22 112222 236677888999999999864 46678999988888776543 2 4
Q ss_pred CCEEE-EcCCCCHHHHHHHHHhhcCCCeEEEEeCc--------chhhc-cC--CCEeEEEEEcC-CCCeeeccHHHHHHH
Q 001586 255 KKTFI-IASNCHPQTIDICITRADGFDIKVVVSDL--------KDIDY-KS--GDVCGVLVQYP-GTEGEVLDYGDFIKN 321 (1049)
Q Consensus 255 g~~Vl-v~~~~Hps~~~~l~~~a~~~gi~v~~v~~--------~~l~~-l~--~~t~~V~v~~p-n~~G~i~di~~I~~~ 321 (1049)
+++++ ++...|++... ..++..|.+++.++. +++++ +. ++++.|++.++ |.+|.+.|+++|+++
T Consensus 74 ~~~vi~~~~~~~~~~~~---~~a~~~g~~~~~i~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~~G~~~~~~~i~~l 150 (355)
T TIGR03301 74 DGKLLVLINGAYGERLA---KICEYLGIPHTDLNFSEYEPPDLNRIEEALAADPDITHVATVHHETTTGILNPLEAIAKV 150 (355)
T ss_pred CCeEEEECCCchhhHHH---HHHHHcCCceEEEecCCCCCCCHHHHHHHHHhCCCceEEEEEecCCcccchhHHHHHHHH
Confidence 56654 56667776332 224456888877654 33444 43 45667776665 789999999999999
Q ss_pred HHhCCcEEEEEeccccccCC-CCCCcccceEEEecC-ccccccCCCCCCceEEEEEchhHHhcCCCceeeeeecCCCCcc
Q 001586 322 AHANGVKVVMATDLLALTIL-KPPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPA 399 (1049)
Q Consensus 322 ah~~galliV~a~~~alg~l-~~p~~~GaDivvgs~-k~lg~P~~~GGP~~G~l~~~~~l~~~lpgrivG~s~d~~g~~~ 399 (1049)
||++|++++|++ ..+++.. .+..++|+|++++++ |+|+ |+||+|++++++++++.+.++.. .
T Consensus 151 ~~~~~~~livD~-~~s~g~~~~~~~~~~~d~~~~s~~K~l~-----~~~G~g~~~~~~~~~~~~~~~~~----------~ 214 (355)
T TIGR03301 151 ARSHGAVLIVDA-MSSFGAIPIDIEELDVDALIASANKCLE-----GVPGFGFVIARRDLLEASAGNAR----------S 214 (355)
T ss_pred HHHcCCEEEEEe-ccccCCcccchhhcCccEEEecCCcccc-----cCCceeEEEECHHHHHHhhCCCC----------C
Confidence 999999999953 4566543 234678999999998 6564 34678999999998877643211 1
Q ss_pred eeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcch-HHHHHHHHHHHHHHHHHHhhcCCCeEEcCCC-Ccc-
Q 001586 400 LRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEG-LKTIAQRVHGLAGTFALGLKKLGTVEVQGLP-FFD- 476 (1049)
Q Consensus 400 ~~l~lqtreq~irrekaTsni~t~~~l~a~~aa~y~~~~g~~G-l~~ia~~~~~~a~~l~~~L~~~g~~~v~~~~-~~~- 476 (1049)
+.+++.+-.+...+...+.+..+...++++.+++ ..+..+| ++++.++..++.+++++.|+++| ++++.++ ...
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al--~~~~~~g~~~~~~~~~~~~~~~~~~~L~~~g-~~~~~~~~~~~~ 291 (355)
T TIGR03301 215 LYLDLYDQWAYMEKTGKWRFTPPTHTVYAFAQAL--EELEAEGGVPARIARYRRNRELLVDGLRALG-FQPLLPERWQSP 291 (355)
T ss_pred ceeeHHHHHHHhhhcCCCCCCCcHHHHHHHHHHH--HHHHHcccHHHHHHHHHHHHHHHHHHHHHcC-CeeecCCCCCCC
Confidence 2222211001111111222222224445555554 4444455 88899999999999999999887 8865332 111
Q ss_pred -eEEEecCC-----HHHHHHHHHHcCCeeeeec---CCeEEEEeccCCCHHHHHHHHHHHh
Q 001586 477 -TVKVKCAD-----AHAIASAAYKIEMNLRVVD---SNTVTASFDETTTLEDVDKLFIVFA 528 (1049)
Q Consensus 477 -~v~i~~~~-----~~~v~~~L~~~gI~~~~~~---~~~vris~~~~~t~edid~lv~aL~ 528 (1049)
.+.+..+. ..++.++|.++||.+.... .+.+|++++.++|++|+++++++|+
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~l~~~gi~i~~~~~~~~~~iRis~~~~~~~~~i~~~~~~l~ 352 (355)
T TIGR03301 292 IIVSFLYPDDPDFDFDDFYQELKERGFVIYPGKLTLADTFRIGTIGEIDAADIERLLEAIK 352 (355)
T ss_pred cEEEEECCCCCcchHHHHHHHHHHCCEEEECCccccccEEEEecCCCCCHHHHHHHHHHHH
Confidence 23455442 4689999999999886532 2689999999999999999999986
No 103
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.81 E-value=2.9e-18 Score=203.80 Aligned_cols=285 Identities=12% Similarity=0.085 Sum_probs=190.8
Q ss_pred hHHHHHHH-HHHHHHHHhCCCCcceEec---cchHHHHHHHHHHhhhccCCCCEEEEcCCCCHHHHHHHHHhhc------
Q 001586 208 GRLESLLN-FQTMIADLTGLPMSNASLL---DEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRAD------ 277 (1049)
Q Consensus 208 g~le~l~e-~q~~ia~L~G~~~~n~sl~---~~~Ta~~eA~~~a~~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~------ 277 (1049)
-..+.+.+ .++.+++++|++.+++.+. .+||.+..+++.++ +. +||+||+++.+|++....++.+.+
T Consensus 76 ~~~~~iE~~ar~~~a~lf~a~~~~~~~~~~~~sgt~an~~v~~al-~~--~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~ 152 (452)
T PTZ00094 76 EVVDKIENLCQKRALEAFGLDPEEWGVNVQPYSGSPANFAVYTAL-LQ--PHDRIMGLDLPSGGHLTHGFYTAKKKVSAT 152 (452)
T ss_pred hHHHHHHHHHHHHHHHHhCCCcccceeecCCCchHHHHHHHHHHh-cC--CCCEEEecccccCCcccccccccccccccc
Confidence 33456663 7889999999987664333 57776666656665 23 789999999999998877643221
Q ss_pred CCCeEEEE--------eCcchhhc-cC-CCEeEEEEEcCCCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCC-----
Q 001586 278 GFDIKVVV--------SDLKDIDY-KS-GDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK----- 342 (1049)
Q Consensus 278 ~~gi~v~~--------v~~~~l~~-l~-~~t~~V~v~~pn~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~----- 342 (1049)
..++++.. +|++++++ +. .+++.|++..+ .+|.+.|+++|+++||++|++++|++ .+++|.+.
T Consensus 153 ~~~~~~~~~~~~~~g~id~~~L~~~l~~~~~~lvi~~~s-~~g~~~di~~I~~i~~~~ga~l~vDa-aq~~G~i~~~~~~ 230 (452)
T PTZ00094 153 SIYFESLPYQVNEKGLIDYDKLEELAKAFRPKLIIAGAS-AYPRDIDYKRFREICDSVGAYLMADI-AHTSGLVAAGVLP 230 (452)
T ss_pred eeeeeeeecccCCCCCcCHHHHHHHHHHhCCCEEEEeCC-CCCCccCHHHHHHHHHHcCCEEEEec-cchhccccCCCCC
Confidence 12233333 23455665 53 24566666544 59999999999999999999999942 34555542
Q ss_pred CCCcccceEEEecC-ccccccCCCCCCceEEEEEchhHHhcCCCceeeeeecCCCCcceeeecccccccccccccCCCcc
Q 001586 343 PPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNIC 421 (1049)
Q Consensus 343 ~p~~~GaDivvgs~-k~lg~P~~~GGP~~G~l~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irrekaTsni~ 421 (1049)
.|. .|+|++++|+ |+|++ |.+|++++++++.+.+..++ ....| . .. .|+.+.
T Consensus 231 ~~~-~~~D~l~~S~hK~l~G------P~Gg~l~~~~~~~~~l~~~~--------~~~~~-----p-----~~-~G~~~~- 283 (452)
T PTZ00094 231 SPF-PYADVVTTTTHKSLRG------PRSGLIFYRKKVKPDIENKI--------NEAVF-----P-----GL-QGGPHN- 283 (452)
T ss_pred CCC-CCCcEEEcCCccCCCC------CCceEEEEecccchHHHHhh--------ccccC-----C-----CC-CCCchH-
Confidence 232 3899999999 66754 44578888766543331111 00000 0 01 133333
Q ss_pred chhHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEcCC---CCcceEEEecCC--HHHHHHHHHHcC
Q 001586 422 TAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL---PFFDTVKVKCAD--AHAIASAAYKIE 496 (1049)
Q Consensus 422 t~~~l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~g~~~v~~~---~~~~~v~i~~~~--~~~v~~~L~~~g 496 (1049)
..++++.+++ .++...+.+++++++.+++++|++.|.+.| +++... .....+.+..++ ..++...|.++|
T Consensus 284 --~~iaal~~al--~~~~~~~~~~~~~~i~~l~~~l~~~L~~~g-~~v~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~g 358 (452)
T PTZ00094 284 --HQIAAIAVQL--KEVQSPEWKEYAKQVLKNAKALAAALEKRG-YDLVTGGTDNHLVLVDLRPFGITGSKMEKLLDAVN 358 (452)
T ss_pred --HHHHHHHHHH--HHHhChhHHHHHHHHHHHHHHHHHHHHhCC-cEEecCCCCCceEeecCCcCCCCHHHHHHHHHHCC
Confidence 3555666665 555566888999999999999999998876 888732 222234444444 678888898889
Q ss_pred Ceeee---------ecCCeEEEEeccCCC----HHHHHHHHHHHhC
Q 001586 497 MNLRV---------VDSNTVTASFDETTT----LEDVDKLFIVFAG 529 (1049)
Q Consensus 497 I~~~~---------~~~~~vris~~~~~t----~edid~lv~aL~~ 529 (1049)
|.+.. ..++.||+|++++|| ++||++++++|..
T Consensus 359 I~vs~~~~p~~~~~~~~~~vRis~~~~tt~g~~~~di~~l~~~l~~ 404 (452)
T PTZ00094 359 ISVNKNTIPGDKSALNPSGVRLGTPALTTRGAKEKDFKFVADFLDR 404 (452)
T ss_pred cEEecccCCCCCcCCCCCeEEECCHHHHhCCCCHHHHHHHHHHHHH
Confidence 98842 124789999999987 9999999999963
No 104
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.81 E-value=5.9e-18 Score=197.72 Aligned_cols=280 Identities=15% Similarity=0.177 Sum_probs=194.1
Q ss_pred hhhHHHHHHHHHHHHHHHhCCCCcceEeccchHHHHHHHHHHhhhccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEE
Q 001586 206 AQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVV 285 (1049)
Q Consensus 206 sqg~le~l~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a~~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~ 285 (1049)
..|+.+...++++.+|+++|.+ ++.++++++.+..+++.++ . ++||+|++++..|+++...++. ++..++.+..
T Consensus 78 ~~G~~~~~~~le~~ia~~~g~~--~~ii~~~~~~a~~~~~~~l-~--~~gd~vi~~~~~~~s~~~~~~~-~~~~~~~~~~ 151 (393)
T TIGR01822 78 ICGTQDIHKELEAKIAAFLGTE--DTILYASCFDANGGLFETL-L--GAEDAIISDALNHASIIDGVRL-CKAKRYRYAN 151 (393)
T ss_pred ccCChHHHHHHHHHHHHHhCCC--cEEEECchHHHHHHHHHHh-C--CCCCEEEEeccccHHHHHHHHh-cCCceEEeCC
Confidence 4487888889999999999986 4677788887777665554 2 3889999999999999988754 4445555555
Q ss_pred eCcchhhc-cC----C--CEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCC---------ccc
Q 001586 286 SDLKDIDY-KS----G--DVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPG---------ELG 348 (1049)
Q Consensus 286 v~~~~l~~-l~----~--~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~p~---------~~G 348 (1049)
++++++++ +. + ++++|++.++ |++|.+.|+++|+++||++|++++++ +..+++.+...+ ..+
T Consensus 152 ~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~tG~~~~l~~i~~la~~~~~~li~D-e~~~~g~~~~~~~~~~~~~~~~~~ 230 (393)
T TIGR01822 152 NDMADLEAQLKEARAAGARHRLIATDGVFSMDGVIAPLDEICDLADKYDALVMVD-ECHATGFLGPTGRGSHELCGVMGR 230 (393)
T ss_pred CCHHHHHHHHHhhhhcCCCceEEEEeCCccCCCCcCCHHHHHHHHHHcCCEEEEE-CCccccCcCCCCCchHHhcCCCCC
Confidence 67777765 43 2 7888887765 78999999999999999999999994 344555432111 126
Q ss_pred ceEEEecC-ccccccCCCCCCceEEEEEchhHHhcCCCceeeeeecCCCCcceeeecccccccccccccCCCccchhHHH
Q 001586 349 ADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALL 427 (1049)
Q Consensus 349 aDivvgs~-k~lg~P~~~GGP~~G~l~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irrekaTsni~t~~~l~ 427 (1049)
+||+++|. |.|+ |+.+|++++++++.+.+... ...+.+ .+|.+ .....
T Consensus 231 ~di~~~s~sK~l~------g~r~G~~~~~~~~~~~l~~~----------~~~~~~------------~~~~~---~~~~~ 279 (393)
T TIGR01822 231 VDIITGTLGKALG------GASGGFTTARKEVVELLRQR----------SRPYLF------------SNSLP---PAVVG 279 (393)
T ss_pred CeEEEEEChHHhh------CCCcEEEEeCHHHHHHHHHh----------Ccccee------------cCCCC---HHHHH
Confidence 89999997 7653 34568999988777655110 000110 11111 12222
Q ss_pred HHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEcCCCCcceEEEecCC---HHHHHHHHHHcCCeeeee--
Q 001586 428 ANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD---AHAIASAAYKIEMNLRVV-- 502 (1049)
Q Consensus 428 a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~g~~~v~~~~~~~~v~i~~~~---~~~v~~~L~~~gI~~~~~-- 502 (1049)
+..+++ ..+ ++.+++.++..++.+++.+.|++.| +++... ....+.+..++ +.++.+.|.++||.+...
T Consensus 280 a~~~al--~~~--~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~-~~~~~~i~~~~~~~~~~l~~~L~~~gI~v~~~~~ 353 (393)
T TIGR01822 280 ASIKVL--EML--EASNELRDRLWANTRYFRERMEAAG-FDIKPA-DHPIIPVMLYDAVLAQRFARRLLEEGIYVTGFFY 353 (393)
T ss_pred HHHHHH--HHH--hcCHHHHHHHHHHHHHHHHHHHHcC-CCCCCC-CCCEEEEEeCCHHHHHHHHHHHHHCCeeEeeeCC
Confidence 333333 332 2456788889999999999998886 776532 12234444433 578999999999987522
Q ss_pred ---c--CCeEEEEeccCCCHHHHHHHHHHHhC
Q 001586 503 ---D--SNTVTASFDETTTLEDVDKLFIVFAG 529 (1049)
Q Consensus 503 ---~--~~~vris~~~~~t~edid~lv~aL~~ 529 (1049)
. ...+|+|++.++|++|||+++++|..
T Consensus 354 ~~~~~~~~~iRis~~~~~t~edi~~~~~~l~~ 385 (393)
T TIGR01822 354 PVVPKGQARIRVQISAAHTEEQLDRAVEAFTR 385 (393)
T ss_pred CCCCCCCceEEEEECCCCCHHHHHHHHHHHHH
Confidence 1 24699999999999999999999963
No 105
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.80 E-value=9.6e-18 Score=193.87 Aligned_cols=303 Identities=15% Similarity=0.158 Sum_probs=189.6
Q ss_pred HHHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCEEEEEcCCCCC
Q 001586 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKG 713 (1049)
Q Consensus 634 i~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~Vv~V~~d~~g 713 (1049)
..++++.+++++|.+.+ +..+++++|...++.+. . .++++|+++...|......+...|++++.++.+.++
T Consensus 46 ~~~l~~~la~~~g~~~i-~~~~g~t~al~~~l~~~---~-----~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~ 116 (361)
T cd06452 46 IKDFHHDLAEFLGMDEA-RVTPGAREGKFAVMHSL---C-----EKGDWVVVDGLAHYTSYVAAERAGLNVREVPNTGHP 116 (361)
T ss_pred HHHHHHHHHHHcCCceE-EEeCCHHHHHHHHHHHh---c-----CCCCEEEEcCCcchHHHHHHHhcCCEEEEEecCCCC
Confidence 55888999999999654 44555555654443332 1 256889999888877666688899999999998765
Q ss_pred --CCCHHHHHHHHHhcC----CCeEEEEEEcCCc-cccccccHHHHHHHHHHcCCEEEEeccccccccCcCCCCccCCcE
Q 001586 714 --NINIEELRKAAEANR----DNLSTLMVTYPST-HGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADV 786 (1049)
Q Consensus 714 --~iD~~~L~~~i~~~~----~~taaV~it~Pn~-~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~Pg~~GaDi 786 (1049)
.+|+++|+++++++. +++++|++++|++ +|... |+++|+++|+++|+++++|+|+..+...+ .+.++|+|+
T Consensus 117 ~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~~-~~~~i~~~~~~~~~~vivD~a~~~g~~~~-~~~~~~~d~ 194 (361)
T cd06452 117 EYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLH-DAKKIAKVCHEYGVPLLLNGAYTVGRMPV-SGKELGADF 194 (361)
T ss_pred CcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeeec-cHHHHHHHHHHcCCeEEEECCcccCCcCC-CHHHcCCCE
Confidence 899999999997421 3789999999965 99998 79999999999999999999875321111 233578999
Q ss_pred EEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchh
Q 001586 787 CHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSK 866 (1049)
Q Consensus 787 ~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~e 866 (1049)
++.++||+|+ +++++|++++++++.+.+-........ ......+... . . ..+..+++.+..+ .+
T Consensus 195 ~~~s~~K~l~-----~~~~~G~l~~~~~~~~~l~~~~~~~~~-----~~~~~~~~~~--~--~-~~~~~~~~al~~~-~~ 258 (361)
T cd06452 195 IVGSGHKSMA-----ASAPIGVLATTEEWADIVFRTSQMFKI-----KEVELLGCTL--R--G-APLVTLMASFPHV-KE 258 (361)
T ss_pred EEecCCcccc-----CCCCeEEEEECHHHHHHHhcccccccc-----ceeeeecccc--C--c-hHHHHHHHHHHHH-HH
Confidence 9999999995 334789999987766543210000000 0000000000 0 0 0111122333222 12
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcc--CCeeeccCCCceeeEEEEeccCcc---ccCCCCHHHHHHHHHHCCcccCCCCCCC
Q 001586 867 GLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEFIVDLRGLK---NTAGIEPEDVAKRLMDYGFHGPTMSWPV 941 (1049)
Q Consensus 867 Gl~~~~~~~~~~a~yL~~~L~~~--~~v~~~g~~g~~~~e~iv~~~~~~---~~~g~~~~~v~k~L~~~Gi~~~~~~~p~ 941 (1049)
.+ +...+..+++++++++|+++ +++.-..+ ...+-+.++.+.+. +....+..++.++|.++||..... ..
T Consensus 259 ~~-~~~~~~~~~~~~l~~~L~~l~g~~v~~~~~--~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~~~~~--~~ 333 (361)
T cd06452 259 RV-KRWDEEVEKARWFVAELEKIEGIKQLGEKP--KNHDLMFFETPSFDEIAKKHKRRGYFLYSELKKRGIHGIKP--GL 333 (361)
T ss_pred HH-HHHHHHHHHHHHHHHHHhcCCCeEEECCCC--CCCceEEEEcCCcchhhhhccccchhHHHHHHHcCceEEcC--CC
Confidence 22 23344456778999999875 33321111 11122334432110 000123447999999999984211 12
Q ss_pred CCEEEEEccCCCCHHHHHHHHHHHHHHH
Q 001586 942 PGTLMIEPTESESKEELDRYCDALISIR 969 (1049)
Q Consensus 942 ~~~lri~~t~~~t~eeid~fv~aL~~i~ 969 (1049)
...+|+.. ...+++|+++++++|+++.
T Consensus 334 ~~~~ri~~-~g~~~e~~~~l~~al~~~~ 360 (361)
T cd06452 334 TRYFKLST-YGLTWEQVEYVVDAFKEIA 360 (361)
T ss_pred ceEEEEEe-cCCCHHHHHHHHHHHHHHh
Confidence 35688876 3368999999999998764
No 106
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.80 E-value=1.8e-17 Score=187.69 Aligned_cols=313 Identities=16% Similarity=0.192 Sum_probs=220.8
Q ss_pred HHHHHHHHHHHHHHhhCCCc--cccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHH----HHHhcCCE
Q 001586 630 YQEMFNNLGEWLCTITGFDS--FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA----TAAMCGMK 703 (1049)
Q Consensus 630 ~~~~i~el~~~la~l~G~~~--~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa----~a~~~G~~ 703 (1049)
...++.++.+.|..+++.+. +.+.++||+.|.++++..+- .++++||+..+ |.+-. .++.+|.+
T Consensus 36 F~~~~~~~~~~L~~v~~t~~~~~~ll~gsGt~amEAav~sl~--------~pgdkVLv~~n--G~FG~R~~~ia~~~g~~ 105 (383)
T COG0075 36 FVGIMKEVLEKLRKVFGTENGDVVLLSGSGTLAMEAAVASLV--------EPGDKVLVVVN--GKFGERFAEIAERYGAE 105 (383)
T ss_pred HHHHHHHHHHHHHHHhcCCCCcEEEEcCCcHHHHHHHHHhcc--------CCCCeEEEEeC--ChHHHHHHHHHHHhCCc
Confidence 44677899999999999884 45677888888877765432 25788887543 44433 47889999
Q ss_pred EEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-ccccccccHHHHHHHHHHcCCEEEEeccccccccCcC-CCCc
Q 001586 704 IVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT-SPGY 781 (1049)
Q Consensus 704 Vv~V~~d~~g~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~-~Pg~ 781 (1049)
++.+.+.+.-.+|+++++++++++ ++..+|.+++.. .+|+.. |+++|+++|++||++++||+.. ++++.. .+.+
T Consensus 106 v~~~~~~wg~~v~p~~v~~~L~~~-~~~~~V~~vH~ETSTGvln-pl~~I~~~~k~~g~l~iVDaVs--S~Gg~~~~vd~ 181 (383)
T COG0075 106 VVVLEVEWGEAVDPEEVEEALDKD-PDIKAVAVVHNETSTGVLN-PLKEIAKAAKEHGALLIVDAVS--SLGGEPLKVDE 181 (383)
T ss_pred eEEEeCCCCCCCCHHHHHHHHhcC-CCccEEEEEeccCcccccC-cHHHHHHHHHHcCCEEEEEecc--cCCCcccchhh
Confidence 999999877789999999999854 567788888874 499999 8999999999999999999873 455543 5678
Q ss_pred cCCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCcc-ccCCCC---CCC-CCCCCCCCCCccchhhHHHHHHH
Q 001586 782 IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPV-VSTGGI---PAP-EKSQPLGTIAAAPWGSALILPIS 856 (1049)
Q Consensus 782 ~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~v-g~t~~~---~~~-~~~~~t~~i~sa~~g~~~~~~~a 856 (1049)
||+|+++.+++|.|+.| ||+|++.++++....+..+.. +...|. .+. .....+..+.+ .....+.
T Consensus 182 wgiDv~itgSQK~l~~P-----PGla~v~~S~~a~e~~~~~~~~~~ylDL~~~~~~~~~~~~~p~Tpp-----v~~i~aL 251 (383)
T COG0075 182 WGIDVAITGSQKALGAP-----PGLAFVAVSERALEAIEERKHPSFYLDLKKWLKYMEKKGSTPYTPP-----VNLIYAL 251 (383)
T ss_pred cCccEEEecCchhccCC-----CccceeEECHHHHHHHhcCCCCceeecHHHHHHHHhhcCCCCCCCC-----HHHHHHH
Confidence 99999999999999644 899999999875554433211 121111 000 01012222221 1222334
Q ss_pred HHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHH-HCCccc
Q 001586 857 YTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-DYGFHG 934 (1049)
Q Consensus 857 ~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~-~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~-~~Gi~~ 934 (1049)
..+++.+-.||+..+.+++..++++++++++.+ +++.. .+.-.......+..+ .|++..++...+. ++|+.+
T Consensus 252 ~~al~~i~~EGle~r~~RH~~~~~a~r~~~~alGl~~~~-~~~~~s~tvta~~~P-----~g~~~~~~~~~~~~~~g~~i 325 (383)
T COG0075 252 REALDLILEEGLEARIARHRRLAEALRAGLEALGLELFA-DPERRSPTVTAIKVP-----EGVDDKKVRRALLKEYGVEI 325 (383)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCcccc-CcccCCCceEEEECC-----CCCCcHHHHHHHHHhCCEEe
Confidence 567888889999999999999999999999986 66643 111111112334443 3666555555544 568887
Q ss_pred CCCCCCC-CCEEEEEccCCCCHHHHHHHHHHHHHHHHHH
Q 001586 935 PTMSWPV-PGTLMIEPTESESKEELDRYCDALISIREEI 972 (1049)
Q Consensus 935 ~~~~~p~-~~~lri~~t~~~t~eeid~fv~aL~~i~~~i 972 (1049)
..-.-|+ +..+||.-.-..+.+++...+.+|..++.+.
T Consensus 326 ~gg~~~l~gkifRIGhMG~~~~~dv~~~l~ale~~L~~~ 364 (383)
T COG0075 326 AGGQGPLKGKIFRIGHMGNVRPEDVLAALAALEAALREL 364 (383)
T ss_pred cccccccCccEEEEecCccCCHHHHHHHHHHHHHHHHHc
Confidence 5433343 3689999888889999999999999988774
No 107
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.79 E-value=5.2e-18 Score=195.60 Aligned_cols=314 Identities=13% Similarity=0.083 Sum_probs=204.8
Q ss_pred CCCCcHHHHHHHHhCCcccccc---CCChhhHh---hhHHHHHHHHHHHHHHHhCCC-CcceEeccc-hHHHHHHHHHHh
Q 001586 177 NTHVPPVILRNIMENPAWYTQY---TPYQAEIA---QGRLESLLNFQTMIADLTGLP-MSNASLLDE-GTAAAEAMAMCN 248 (1049)
Q Consensus 177 ~~~~p~~i~~~~~~~~~~~t~y---tpyq~e~s---qg~le~l~e~q~~ia~L~G~~-~~n~sl~~~-~Ta~~eA~~~a~ 248 (1049)
|..+|+.|.+++.. ++..| +-...+++ +...+.+.+.++.+++|+|++ ..++.++.| +|.+++++..++
T Consensus 7 p~~~p~~V~~a~~~---~~~~~~~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~~~~~~~~vvf~~gs~T~a~~~~~~~l 83 (355)
T cd00611 7 PAALPEEVLEQAQK---ELLDFNGLGMSVMEMSHRSKDFEAIVNEAESDLRELLNIPDNYKVLFLQGGATGQFAAVPLNL 83 (355)
T ss_pred CCCCCHHHHHHHHH---HHhhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhc
Confidence 34577777666554 23222 11111233 344577889999999999984 457888877 999999888766
Q ss_pred hhccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCcc------h---hh-c-cCCCEeEEEEEc-CCCCeeeccHH
Q 001586 249 NIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK------D---ID-Y-KSGDVCGVLVQY-PGTEGEVLDYG 316 (1049)
Q Consensus 249 ~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~~~------~---l~-~-l~~~t~~V~v~~-pn~~G~i~di~ 316 (1049)
....+++++|++....|.. ...++..|+++++++.+ + ++ . +++++++|.+++ .|.+|.+.+
T Consensus 84 ~~~~~~~~~i~~g~~~~~~-----~~~a~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~lV~~~h~~t~tG~~~~-- 156 (355)
T cd00611 84 LGDKGTADYVVTGAWSAKA-----AKEAKRYGGVVVIVAAKEEGKYTKIPDVETWDLAPDAAYVHYCSNETIHGVEFD-- 156 (355)
T ss_pred CCCCCeEEEEECCHHHHHH-----HHHHHhcCCCcEEEecccccCCCCCCCHhhcCCCCCCCEEEEeCCcccccEEcc--
Confidence 3211245566553333322 22355678888876642 2 11 2 567899998876 689999832
Q ss_pred HHHHHHHhCCcEEEEEeccccccCC-CCCCcccceEEEecCccccccCCCCCCceEEEEEchhHHhcCCCceeeeeecCC
Q 001586 317 DFIKNAHANGVKVVMATDLLALTIL-KPPGELGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSS 395 (1049)
Q Consensus 317 ~I~~~ah~~galliV~a~~~alg~l-~~p~~~GaDivvgs~k~lg~P~~~GGP~~G~l~~~~~l~~~lpgrivG~s~d~~ 395 (1049)
++++.+|++++|++ ..++|.. .+..++|+ ++.++|++.+| ||+|++++++++.+++++.....
T Consensus 157 ---~i~~~~g~~~~VDa-~qs~g~~~idv~~~~~--~~ss~~K~lGP-----~G~g~l~~~~~~~~~~~~~~~~~----- 220 (355)
T cd00611 157 ---EVPDTGGVPLVADM-SSNILSRPIDVSKFGV--IYAGAQKNLGP-----AGVTVVIVRKDLLGKARKITPSM----- 220 (355)
T ss_pred ---eecccCCCeEEEEc-cccccCCCCCHHHhCE--EEeecccccCC-----CceEEEEECHHHHhhcccCCCCc-----
Confidence 44556999999943 2355543 34456664 55557665334 57899999999988876532110
Q ss_pred CCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcc-hHHHHHHHHHHHHHHHHHHhhcC-CCeE-EcCC
Q 001586 396 GKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPE-GLKTIAQRVHGLAGTFALGLKKL-GTVE-VQGL 472 (1049)
Q Consensus 396 g~~~~~l~lqtreq~irrekaTsni~t~~~l~a~~aa~y~~~~g~~-Gl~~ia~~~~~~a~~l~~~L~~~-g~~~-v~~~ 472 (1049)
+...+..+. ....+|+|+ .+++++.+++ .|+..+ |++++.+|..+++++++++|+++ | +. ...+
T Consensus 221 ------~~~~~~~~~-~~~~~Tpn~---~~i~~L~aal--~~l~~~gg~e~i~~~~~~l~~~l~~~l~~~~g-l~~~~~~ 287 (355)
T cd00611 221 ------LNYKTHADN-NSLYNTPPT---FAIYMMGLVL--KWLKEQGGVEAMEKRNRQKAQLLYDTIDNSNG-FYRGPVD 287 (355)
T ss_pred ------ccHHHHHhc-CCCCCCChH---HHHHHHHHHH--HHHHHcCCHHHHHHHHHHHHHHHHHHHHhCcc-ccccCCC
Confidence 000000000 012478887 7888888887 777777 79999999999999999999999 6 63 2111
Q ss_pred --CCcc-eEEEecCC---HHHHHHHHHHcCCeeeee--cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001586 473 --PFFD-TVKVKCAD---AHAIASAAYKIEMNLRVV--DSNTVTASFDETTTLEDVDKLFIVFAG 529 (1049)
Q Consensus 473 --~~~~-~v~i~~~~---~~~v~~~L~~~gI~~~~~--~~~~vris~~~~~t~edid~lv~aL~~ 529 (1049)
.... .++|+.++ ..++.+.+.+.|+..... ..+.+|+|+..+||++|||+|+++|+.
T Consensus 288 ~~~rs~~vvsf~~~~~~l~~~~~~~~~r~G~~~~~~~~~~g~vR~S~~~~nt~edi~~l~~al~~ 352 (355)
T cd00611 288 KRARSRMNVPFRLGKEELEKEFLKEAEAAGMIGLKGHRSVGGIRASIYNALSLEGVQALADFMKE 352 (355)
T ss_pred HHHcCceEEEEEcCChhhhHHHHHHHHHCCCcccCCCcccCeEEEEccCCCCHHHHHHHHHHHHH
Confidence 1232 37777665 345556777789975433 247899999999999999999999963
No 108
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.79 E-value=1.4e-17 Score=195.12 Aligned_cols=292 Identities=21% Similarity=0.244 Sum_probs=191.0
Q ss_pred HHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHH-----HHhcCCEEEEEcCCC
Q 001586 637 LGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT-----AAMCGMKIVSVGTDA 711 (1049)
Q Consensus 637 l~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~-----a~~~G~~Vv~V~~d~ 711 (1049)
.++++++++|.+...+.+++|++|..+++.++. +++++||++...|+.+... ++..|.+++.++++.
T Consensus 70 ~~~~~~~~~g~~~~~v~~~sgt~a~~~~l~~l~--------~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 141 (402)
T cd00378 70 AIERAKKLFGAEYANVQPHSGSQANLAVYFALL--------EPGDTIMGLDLSHGGHLTHGSFTKVSASGKLFESVPYGV 141 (402)
T ss_pred HHHHHHHHhCCCceeeecCCcHHHHHHHHHHhc--------CCCCEEEEecCccCccccccccccccccceeEEEecCCc
Confidence 567788999998766666777777655544432 2568899988888766443 566788777776643
Q ss_pred ---CCCCCHHHHHHHHHhcCCCeEEEEEEcCCccccccccHHHHHHHHHHcCCEEEEecccccccc--C-cCCCCccCCc
Q 001586 712 ---KGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQV--G-LTSPGYIGAD 785 (1049)
Q Consensus 712 ---~g~iD~~~L~~~i~~~~~~taaV~it~Pn~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~--g-l~~Pg~~GaD 785 (1049)
++.+|++++++++.+ +++++|++++|+ +|... |+++|+++||++|+++++|+++..++. + ...+.. ++|
T Consensus 142 ~~~~~~id~~~l~~~i~~--~~~~~v~~~~~~-~~~~~-~~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~~~~~-~~d 216 (402)
T cd00378 142 DPETGLIDYDALEKMALE--FKPKLIVAGASA-YPRPI-DFKRFREIADEVGAYLLVDMAHVAGLVAGGVFPNPLP-GAD 216 (402)
T ss_pred CcccCCcCHHHHHHHHHh--CCCCEEEecCcc-cCCCc-CHHHHHHHHHhcCCEEEEEccchhhhhhcccCCCccc-CCc
Confidence 589999999999963 467788887775 46665 799999999999999999998744332 1 112223 789
Q ss_pred EEEeCCCcccccCCCCCCCceeEEEEcc-cccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHc
Q 001586 786 VCHLNLHKTFCIPHGGGGPGMGPIGVKK-HLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMG 864 (1049)
Q Consensus 786 i~~~s~hK~f~~P~g~GGPg~G~i~~~~-~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG 864 (1049)
+++.++||+| +||.+|++++++ ++...+..... ....+++.. ...++.+. .+..+.
T Consensus 217 v~~~s~sK~l------~G~~gg~i~~~~~~~~~~l~~~~~--------------~~~~~~~~~--~~~~a~~~-al~~~~ 273 (402)
T cd00378 217 VVTTTTHKTL------RGPRGGLILTRKGELAKKINSAVF--------------PGLQGGPHL--HVIAAKAV-ALKEAL 273 (402)
T ss_pred EEEeccccCC------CCCCceEEEeccHHHHHHHHHHhC--------------ccccCCchH--HHHHHHHH-HHHHHh
Confidence 9999999988 367778777776 65544311000 000111111 11111122 222222
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHHHCCcccCCCCCCC--
Q 001586 865 SKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPV-- 941 (1049)
Q Consensus 865 ~eGl~~~~~~~~~~a~yL~~~L~~~-~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~p~-- 941 (1049)
..++.+..++..++++++.+.|++. +.+. ..+.+ .+.+.++++. .+.+...+.+.|.++||.+....+|.
T Consensus 274 ~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~-~~~~~--~~~v~v~~~~----~~~~~~~~~~~l~~~gI~v~~~~~p~~~ 346 (402)
T cd00378 274 EPEFKAYAKQVVENAKALAEALKERGFKVV-SGGTD--NHLVLVDLRP----KGITGKAAEDALEEAGITVNKNTLPWDP 346 (402)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhCCCeEe-ecCCC--CeEEEEeCCc----cCCCHHHHHHHHHHcCcEEcCCcCCCCC
Confidence 2245666677888999999999875 4442 12112 2335566642 13355677788888999985433332
Q ss_pred -----CCEEEEEccCCC----CHHHHHHHHHHHHHHHHH
Q 001586 942 -----PGTLMIEPTESE----SKEELDRYCDALISIREE 971 (1049)
Q Consensus 942 -----~~~lri~~t~~~----t~eeid~fv~aL~~i~~~ 971 (1049)
.+.+|++++..+ +.+|++++++.|++++++
T Consensus 347 ~~~~~~~~lRi~~~~~~~~~~~~~di~~~~~~l~~~~~~ 385 (402)
T cd00378 347 SSPFVPSGIRIGTPAMTTRGMGEEEMEEIADFIARALKD 385 (402)
T ss_pred CCCCCCCeeEecCHHHHHhCCCHHHHHHHHHHHHHHHhc
Confidence 257999998754 699999999999987644
No 109
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.79 E-value=4.4e-17 Score=190.13 Aligned_cols=283 Identities=16% Similarity=0.114 Sum_probs=191.7
Q ss_pred hHHHHHHHHHHHHHHHhCCCCcceEeccchHHHHHHHHHHhhhccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeC
Q 001586 208 GRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSD 287 (1049)
Q Consensus 208 g~le~l~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a~~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~ 287 (1049)
+....+.++++.+|+++|++. +.+++|+|.+..+++.++ . ++|++|++++..|.+....++ ..|++++.++
T Consensus 60 ~~~~~~~~l~~~lA~~~g~~~--~~~~~g~t~a~~~al~~l-~--~~gd~Vlv~~~~h~s~~~~~~----~~G~~~~~v~ 130 (387)
T PRK09331 60 IKKPPIADFHEDLAEFLGMDE--ARVTHGAREGKFAVMHSL-C--KKGDYVVLDGLAHYTSYVAAE----RAGLNVREVP 130 (387)
T ss_pred ccChHHHHHHHHHHHHhCCCc--EEEeCCHHHHHHHHHHHh-c--CCCCEEEECCCchHHHHHHHH----HcCCEEEEEe
Confidence 334568899999999999975 678899998877766655 2 388999999999999887653 3588888876
Q ss_pred c----------chhhc-cC-------CCEeEEEEEcCC-CCeeeccHHHHHHHHHhCCcEEEEEeccccccCCC-CCCcc
Q 001586 288 L----------KDIDY-KS-------GDVCGVLVQYPG-TEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGEL 347 (1049)
Q Consensus 288 ~----------~~l~~-l~-------~~t~~V~v~~pn-~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~-~p~~~ 347 (1049)
. +++++ +. +++++|++++|+ .+|.+.|+++|+++||++|++++|++ .+++|.+. +..++
T Consensus 131 ~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~~~tG~~~~l~~I~~la~~~g~~livD~-a~~~g~~~~~~~~~ 209 (387)
T PRK09331 131 KTGYPEYKITPEAYAEKIEEVKEETGKPPALALLTHVDGNYGNLADAKKVAKVAHEYGIPFLLNG-AYTVGRMPVDGKKL 209 (387)
T ss_pred CccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEECCCCCCcccccHHHHHHHHHHcCCEEEEEC-CcccCCcCCCHHHc
Confidence 5 23443 42 378999999985 69999999999999999999999943 45666543 44679
Q ss_pred cceEEEecC-ccccccCCCCCCceEEEEEchhHHhcCCCceeeeeecCCCCcceeeecccccccccccccCCCccchhHH
Q 001586 348 GADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQAL 426 (1049)
Q Consensus 348 GaDivvgs~-k~lg~P~~~GGP~~G~l~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irrekaTsni~t~~~l 426 (1049)
|+|++++|+ |+|++ +|++||+++++++.+.+-.. .+.|... . ......|++. .+.
T Consensus 210 g~D~~~~s~~K~l~~-----~~~~G~l~~~~~~i~~~~~~----------~~~~~~~-----~-~~~~~~~~~~---~~~ 265 (387)
T PRK09331 210 GADFIVGSGHKSMAA-----SAPSGVLATTEEYADKVFRT----------SRKFGVK-----E-VELLGCTLRG---APL 265 (387)
T ss_pred CCCEEEeeCcccccC-----CCCEEEEEECHHHHhhcccc----------cCCCccc-----c-eeeeceecCc---hHH
Confidence 999999998 66653 34689999999877665211 0111100 0 0000112211 234
Q ss_pred HHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHhhcC-CCeEEcCC-CCcce-EEEecCC-----------HHHHHHHH
Q 001586 427 LANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKL-GTVEVQGL-PFFDT-VKVKCAD-----------AHAIASAA 492 (1049)
Q Consensus 427 ~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~-g~~~v~~~-~~~~~-v~i~~~~-----------~~~v~~~L 492 (1049)
+++++++. .+- +-+ +..++.++++++++++|+++ | ++++.. +.... +.+..+. +.++.+.|
T Consensus 266 ~~~~aal~--~~~-~~~-~~~~~~~~~~~~l~~~L~~l~g-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~L 340 (387)
T PRK09331 266 VTLMASFP--HVV-ERV-KRWDEEVKKARWFVDELEKIEG-FKQLGEKPRNHDLMKFETPSFDEIAKKHKRRGFFLYEEL 340 (387)
T ss_pred HHHHHHHH--HHH-HHH-HHHHHHHHHHHHHHHHHhcCCC-EEEeccCcCcCCeEEEeCCchhHHhhhccccchhHHHHH
Confidence 44555541 111 112 24455678899999999999 6 998842 11112 2233221 35689999
Q ss_pred HHcCCeeeeecCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001586 493 YKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAG 529 (1049)
Q Consensus 493 ~~~gI~~~~~~~~~vris~~~~~t~edid~lv~aL~~ 529 (1049)
.++||.......+.++...+..+|++|+++++++|+.
T Consensus 341 ~~~gI~~~~~~~~~i~ri~~~g~t~~di~~l~~aL~~ 377 (387)
T PRK09331 341 KKRGIHGIKPGATKEFKLSTYGLTWEQVEYVADAFKE 377 (387)
T ss_pred HHcCceEEccCCceEEEEEeccCCHHHHHHHHHHHHH
Confidence 9999974332345666666666899999999999973
No 110
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.79 E-value=1.3e-17 Score=187.93 Aligned_cols=320 Identities=18% Similarity=0.189 Sum_probs=197.2
Q ss_pred ccCCCCCCCCCcHHHHHHHHhCCcccccc--CCChhhHhhhHH--HHHHHHHHHHHHHhCCCCcceEeccchHHHHHHHH
Q 001586 170 FIGMGYYNTHVPPVILRNIMENPAWYTQY--TPYQAEIAQGRL--ESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMA 245 (1049)
Q Consensus 170 ~lG~g~y~~~~p~~i~~~~~~~~~~~t~y--tpyq~e~sqg~l--e~l~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~ 245 (1049)
|+..+..+. +|+.|.+.+.. |++.| .|-.. +-|+- .++.++|+.||+|+|+++.+++|++++| |+.+
T Consensus 46 yld~~at~p-~~~~Vldam~~---~~~~~~~nPh~~--~y~w~~~~~~E~aR~~VAklInAd~~dIiFts~AT---Es~N 116 (428)
T KOG1549|consen 46 YLDNQATGP-MDPRVLDAMLP---YLLEYLGNPHSR--SYGWKAEDAVEAAREQVAKLINADPSDIVFTSGAT---ESNN 116 (428)
T ss_pred EEecCcCCC-CCHHHHHHHHH---HHHHhhcCCCcc--ccchhhhHHHHHHHHHHHHHhCCCCCcEEEeCCch---HHHH
Confidence 344444433 55555445553 44433 33222 23333 3489999999999999999999999999 5555
Q ss_pred HHhhh-ccCCCC----EEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCcc--------hhhc-cCCCEeEEEEEcC-CCCe
Q 001586 246 MCNNI-QKGKKK----TFIIASNCHPQTIDICITRADGFDIKVVVSDLK--------DIDY-KSGDVCGVLVQYP-GTEG 310 (1049)
Q Consensus 246 ~a~~~-~~~~g~----~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~~~--------~l~~-l~~~t~~V~v~~p-n~~G 310 (1049)
+++.. .+..++ +||+...+||++...|+.+ +..|++++.+|++ ++++ |+++|++|.+.+. |..|
T Consensus 117 lvl~~v~~~~~~~~~k~iitl~~eH~~v~~s~~~l-~~~g~~Vt~lpv~~~~~~d~~~~~~~i~~~T~lv~I~~Vnn~~g 195 (428)
T KOG1549|consen 117 LVLKGVARFFGDKTKKHIITLQTEHPCVLDSCRAL-QEEGLEVTYLPVEDSGLVDISKLREAIRSKTRLVSIMHVNNEIG 195 (428)
T ss_pred HHHHHhhccccccccceEEEecccCcchhHHHHHH-HhcCeEEEEeccCccccccHHHHHHhcCCCceEEEEEecccCcc
Confidence 54331 111233 8999999999999999885 5678999998873 3444 8899999999875 7899
Q ss_pred eeccHHHHHHHHHhCCcEEEEEeccccccCC-CCCCcccceEEEecCccccccCCCCCCceEEEEEchh--HHhcCCCce
Q 001586 311 EVLDYGDFIKNAHANGVKVVMATDLLALTIL-KPPGELGADIVVGSAQRFGVPMGYGGPHAAFLATSQE--YKRMMPGRI 387 (1049)
Q Consensus 311 ~i~di~~I~~~ah~~galliV~a~~~alg~l-~~p~~~GaDivvgs~k~lg~P~~~GGP~~G~l~~~~~--l~~~lpgri 387 (1049)
++.|+++|+++|++.|+.+++++ ..+.|.. .+..++|+|+++.++++|. |-|+.|+|||+++ .++.. +.+
T Consensus 196 v~~Pv~EI~~icr~~~v~v~~Da-AQavG~i~vDV~eln~D~~s~s~HK~y-----gp~~iGaLYvr~~~~~~~~~-p~~ 268 (428)
T KOG1549|consen 196 VLQPVKEIVKICREEGVQVHVDA-AQAVGKIPVDVQELNADFLSISAHKIY-----GPPGIGALYVRRKRPRLRVE-PPL 268 (428)
T ss_pred ccccHHHHHHHhCcCCcEEEeeh-hhhcCCccccHHHcCchheeeeccccc-----CCCcceEEEEccCCCccccc-Ccc
Confidence 99999999999999999999943 3466654 3668999999999996663 4467999999972 22322 334
Q ss_pred eeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHhhc-CCC
Q 001586 388 VGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKK-LGT 466 (1049)
Q Consensus 388 vG~s~d~~g~~~~~l~lqtreq~irrekaTsni~t~~~l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~-~g~ 466 (1049)
.| |.+ -|. .+.||-+..++ .++-+|+-..--...+.+.+..+ +...+..++.. ..+
T Consensus 269 ~G------Ggq-------~r~----~rsGT~~~~~~---~~~gsA~e~~~~~~~~~~~~~~~---~~~~ll~~i~~~~~~ 325 (428)
T KOG1549|consen 269 SG------GGQ-------ERG----LRSGTVATPLA---VGLGSAAEFVNKEMAYDEAIIKR---LSEKLLMGIGQSLPE 325 (428)
T ss_pred cC------Ccc-------ccc----cccCCcCchhh---hhhHHHHHHHHhhcchhHHHHHH---HHHHHHHHHhhhCch
Confidence 44 211 111 24577666432 23444441111112233444433 44455555432 221
Q ss_pred eEEcCC-C--CcceEEEecC--CHHHHHHHHHH----cCCe-----eee------------ecCCeEEEEeccCCCHHHH
Q 001586 467 VEVQGL-P--FFDTVKVKCA--DAHAIASAAYK----IEMN-----LRV------------VDSNTVTASFDETTTLEDV 520 (1049)
Q Consensus 467 ~~v~~~-~--~~~~v~i~~~--~~~~v~~~L~~----~gI~-----~~~------------~~~~~vris~~~~~t~edi 520 (1049)
+.+.+. + ....+.|.++ ....+...+.+ -|.- +.+ .....||+|+.-+||.+|+
T Consensus 326 ~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~s~~a~~~~~~epsy~l~~~G~~~~~~~~~iRis~G~y~t~~di 405 (428)
T KOG1549|consen 326 VTLNGSGKSRYPGLVSLSFPYVEGESLLMDLKDVALSSGSACTSASLEPSYVLRAIGVDEDLAHSSIRISIGRYTTEEDI 405 (428)
T ss_pred hhccCCcccccccceeeecccccCcchhhhhhhhhhcccchhhcCCCCcchhhhhcCcchhhhcceeEEeeeeeCcHHHH
Confidence 233322 1 1123444444 11111111111 1110 000 0146799999999999999
Q ss_pred HHHHHHHhC
Q 001586 521 DKLFIVFAG 529 (1049)
Q Consensus 521 d~lv~aL~~ 529 (1049)
|++++++..
T Consensus 406 ~~~~~~i~~ 414 (428)
T KOG1549|consen 406 DYLVDAIKK 414 (428)
T ss_pred HHHHHHHHH
Confidence 999999863
No 111
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.79 E-value=2.3e-17 Score=189.44 Aligned_cols=281 Identities=12% Similarity=0.042 Sum_probs=192.7
Q ss_pred HHHHHHHHHHHHHhCCCC-cceEeccc-hHHHHHHHHHHhhhccCCCCEEEE-cCCCCHHHHHHHHHhhcCCCeEEEEeC
Q 001586 211 ESLLNFQTMIADLTGLPM-SNASLLDE-GTAAAEAMAMCNNIQKGKKKTFII-ASNCHPQTIDICITRADGFDIKVVVSD 287 (1049)
Q Consensus 211 e~l~e~q~~ia~L~G~~~-~n~sl~~~-~Ta~~eA~~~a~~~~~~~g~~Vlv-~~~~Hps~~~~l~~~a~~~gi~v~~v~ 287 (1049)
+.+.+.++.+..|+|.+. ..+.++.| ||.++|++...+. . +++++++ ..+.+..-. ...++..|+ +..+.
T Consensus 37 ~~~~~~~~~l~~l~~~~~~~~v~~~~gsgT~a~ea~~~nl~-~--~~~~~l~i~~G~fg~r~---~~~a~~~g~-~~~~~ 109 (349)
T TIGR01364 37 AVANEAESDLRELLNIPDNYEVLFLQGGATGQFAAVPLNLL-A--EGKVADYIVTGAWSKKA---AKEAKKYGV-VNVVA 109 (349)
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcC-C--CCCeEEEEECCHHHHHH---HHHHHHhCC-cEEEe
Confidence 788889999999999843 35777766 9999999887653 2 5677654 334443322 333556676 44433
Q ss_pred c---------chhhc--cCCCEeEEEEEc-CCCCeeeccHHHHHHHHHhCCcEEEEEeccccccCC-CCCCcccceEEEe
Q 001586 288 L---------KDIDY--KSGDVCGVLVQY-PGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTIL-KPPGELGADIVVG 354 (1049)
Q Consensus 288 ~---------~~l~~--l~~~t~~V~v~~-pn~~G~i~di~~I~~~ah~~galliV~a~~~alg~l-~~p~~~GaDivvg 354 (1049)
. .+++. ++++++.|.+++ .|++|+..+ ++++.+|++++|++ ..++|.. .+..+| |++++
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~v~~th~ETstGv~~~-----~l~~~~~~l~iVDa-vss~g~~~id~~~~--d~~~~ 181 (349)
T TIGR01364 110 SGKEGNYTKIPDPSTWEISEDAAYVHYCANETIHGVEFR-----ELPDVKNAPLVADM-SSNILSRPIDVSKF--GLIYA 181 (349)
T ss_pred ccccCCCCCCCCHHhcCCCCCCCEEEEcCCCCcccEecc-----eecccCCCeEEEEc-cccccCccCCHHHc--cEEEE
Confidence 1 23332 456889998876 589999876 66777899999953 2345433 234455 59999
Q ss_pred cCccccccCCCCCCceEEEEEchhHHhcCCCceeeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHH
Q 001586 355 SAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMY 434 (1049)
Q Consensus 355 s~k~lg~P~~~GGP~~G~l~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irrekaTsni~t~~~l~a~~aa~y 434 (1049)
++||+.+| ||+|++++++++++++++.... + +.+....+. ..-.+|+|+ ..++++.+++
T Consensus 182 ssqK~lgP-----~Glg~l~~s~~~~~~~~~~~~~----------~-~~~~~~~~~-~~~~~Tp~~---~~i~al~~al- 240 (349)
T TIGR01364 182 GAQKNIGP-----AGLTVVIVRKDLLGRASRITPS----------M-LNYKIHAEN-DSMYNTPPT---FAIYVSGLVF- 240 (349)
T ss_pred ecccccCC-----CceEEEEECHHHHhhcccCCCC----------c-chHHHHHhc-CCCCCCCcH---HHHHHHHHHH-
Confidence 99554224 6799999999999887652111 1 111000000 011267787 7888888887
Q ss_pred HHHhCcc-hHHHHHHHHHHHHHHHHHHhhcCCCeEEcC-C--CCcce-EEEecCC---HHHHHHHHHHcCCeeeeec--C
Q 001586 435 AVYHGPE-GLKTIAQRVHGLAGTFALGLKKLGTVEVQG-L--PFFDT-VKVKCAD---AHAIASAAYKIEMNLRVVD--S 504 (1049)
Q Consensus 435 ~~~~g~~-Gl~~ia~~~~~~a~~l~~~L~~~g~~~v~~-~--~~~~~-v~i~~~~---~~~v~~~L~~~gI~~~~~~--~ 504 (1049)
.++..+ |++++.+|..+++++++++|++++|+.... . ....+ ++|..++ ..++.+.+.++||.+.... .
T Consensus 241 -~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~v~sf~~~~~~~~~~~~~~~~~~Gi~~~~~~~~~ 319 (349)
T TIGR01364 241 -KWLKEQGGVKAIEKRNQAKAQLLYDTIDNSNGFYRNPVDPRNRSRMNVVFTLGNEELEKRFLKEAEERGLVSLKGHRSV 319 (349)
T ss_pred -HHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCeeccCCCHHHcCCeEEEEecCChhHhHHHHHHHHHCCCcccCCcccc
Confidence 777778 799999999999999999999995475542 2 12323 6677664 2567677888999554432 4
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHh
Q 001586 505 NTVTASFDETTTLEDVDKLFIVFA 528 (1049)
Q Consensus 505 ~~vris~~~~~t~edid~lv~aL~ 528 (1049)
+.+|+|+..+||+||||+|+++|+
T Consensus 320 g~vRvS~~~~nt~edid~l~~al~ 343 (349)
T TIGR01364 320 GGMRASIYNAMPLEGVQALVDFMK 343 (349)
T ss_pred CeeEEECcCCCCHHHHHHHHHHHH
Confidence 789999999999999999999996
No 112
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.78 E-value=8.8e-17 Score=186.55 Aligned_cols=284 Identities=17% Similarity=0.164 Sum_probs=190.9
Q ss_pred HhhhHHHHHHHHHHHHHHHhCCCCcceEeccchHHHHHHHHHHhhhccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEE
Q 001586 205 IAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVV 284 (1049)
Q Consensus 205 ~sqg~le~l~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a~~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~ 284 (1049)
..+|....+.++++.+|+++|++. +.++++++.+..+++.++. +++|+||++...|.+....+ +..|++++
T Consensus 45 ~~~~~~~~~~~~~e~lA~~~g~~~--~~i~~g~~~a~~~~~~~l~---~~gd~Vl~~~~~h~s~~~~~----~~~g~~~~ 115 (370)
T TIGR02539 45 LDQITKPPIHDFLEDLAEFLGMDE--ARVTHGAREGKFAVMHALC---KEGDWVVLDGLAHYTSYVAA----ERAGLNVK 115 (370)
T ss_pred cccccchHHHHHHHHHHHHhCCCc--eEEECChHHHHHHHHHHhh---CCCCEEEECCcccHHHHHHH----HHcCCEEE
Confidence 456666678888899999999986 4567999988888777653 37899999999998887654 34688877
Q ss_pred EeCc----------chhhc-cC-------CCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCC-CC
Q 001586 285 VSDL----------KDIDY-KS-------GDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PP 344 (1049)
Q Consensus 285 ~v~~----------~~l~~-l~-------~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~-~p 344 (1049)
.++. +++++ +. +++++|++++| |++|.+.|+++|+++||++|++++|+ +.++.+.+. +.
T Consensus 116 ~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~l~~i~~la~~~~~~livD-ea~~~g~~~~~~ 194 (370)
T TIGR02539 116 EVPHTGHPEYKVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPDAGKVAKVCREKGVPLLLN-CAYTVGRMPVSA 194 (370)
T ss_pred EEecCCcccCCcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCccccCHHHHHHHHHHcCCeEEEE-CccccCCcCCCH
Confidence 7654 34444 43 36788999998 68999999999999999999999994 345666443 33
Q ss_pred CcccceEEEecC-ccccccCCCCCCceEEEEEchhHHhcCCCceeeeeecCCCCcceeeecccccccccccccCCCccch
Q 001586 345 GELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTA 423 (1049)
Q Consensus 345 ~~~GaDivvgs~-k~lg~P~~~GGP~~G~l~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irrekaTsni~t~ 423 (1049)
.++++|++++|. |+|+. ||| +||+++++++.+.+...... |.+.. ...-.+|++.
T Consensus 195 ~~~~~di~v~s~sK~~~~----~g~-~G~l~~~~~~i~~l~~~~~~----------~~~~~------~~~~~~~~~~--- 250 (370)
T TIGR02539 195 KEIGADFIVGSGHKSMAA----SGP-CGVLGMSEEWEDIVLRKSRY----------SPVKE------VELLGCTSRG--- 250 (370)
T ss_pred HHcCCCEEEeeCcccccC----CCC-EEEEEECHHHHhhhcccccC----------Cccce------eeeecccccc---
Confidence 468999999997 77752 333 89999999888776321110 11100 0000122221
Q ss_pred hHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEcC--CCCcceEEEecCC-----------HHHHHH
Q 001586 424 QALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQG--LPFFDTVKVKCAD-----------AHAIAS 490 (1049)
Q Consensus 424 ~~l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~g~~~v~~--~~~~~~v~i~~~~-----------~~~v~~ 490 (1049)
.+..+.++++ ... .+-+++ ..+..+++++|+++|+++| ++++. +...+-+.++++. +..+.+
T Consensus 251 ~~~~~~~~al--~~~-~~~l~~-~~~~~~~~~~l~~~L~~~g-~~~~~~~~s~t~~v~~~~~~~~~~~~~~~~~~~~~~~ 325 (370)
T TIGR02539 251 APIVTMMASF--PHV-VERVKR-WDEEVKKTRWFVAELEDIG-FIQLGQKPKEHDLVKFETPGFHEIAQKHKRRGYFLYE 325 (370)
T ss_pred cHHHHHHHHH--HHH-HHHHHH-HHHHHHHHHHHHHHHHhCC-cEEEccCCCcCceEEEECCchhHHhhhhccccHHHHH
Confidence 1232333333 111 122222 2334555789999999998 88752 2222234444332 346899
Q ss_pred HHHHcCCe-eeeecCCeEEEEeccCCCHHHHHHHHHHHh
Q 001586 491 AAYKIEMN-LRVVDSNTVTASFDETTTLEDVDKLFIVFA 528 (1049)
Q Consensus 491 ~L~~~gI~-~~~~~~~~vris~~~~~t~edid~lv~aL~ 528 (1049)
+|.++||. ++.-.++.+|+|+. ..|++|+++++++|+
T Consensus 326 ~L~e~GI~~ir~~~~~~iRis~~-~~t~e~i~~l~~~L~ 363 (370)
T TIGR02539 326 ELKKRGIHGIRSGQTKYFKLSVY-GLTKEQVEYVVDSFE 363 (370)
T ss_pred HHHhCCCccccCCcceEEEEEec-CCCHHHHHHHHHHHH
Confidence 99999997 55322468999984 679999999999996
No 113
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.78 E-value=2.1e-17 Score=192.92 Aligned_cols=310 Identities=17% Similarity=0.187 Sum_probs=207.2
Q ss_pred CccccccCCCCCCCCCcHHHHHHHHhCCccccccCCChhhHhhhHHHHHHHHHHHHHHHhCCCCcceEeccchHHHHHHH
Q 001586 165 KVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAM 244 (1049)
Q Consensus 165 ~~~~~~lG~g~y~~~~p~~i~~~~~~~~~~~t~ytpyq~e~sqg~le~l~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~ 244 (1049)
...++|||.+.+|....+++. . +++ |.+ ++-.+....|+...+.++++.+|+++|.+. +.++++|..+.-++
T Consensus 107 FsSndYLGL~~~p~v~~a~~~-a-i~~--yG~--g~~gSrl~~G~~~~h~~LE~~LA~f~g~e~--all~sSGy~AN~~~ 178 (476)
T PLN02955 107 FSGNDYLGLSSHPTISNAAAN-A-AKE--YGM--GPKGSALICGYTTYHRLLESSLADLKKKED--CLVCPTGFAANMAA 178 (476)
T ss_pred eeccCccCCCCCHHHHHHHHH-H-HHH--cCC--CCCCcCccccChHHHHHHHHHHHHHHCCCc--EEEECChHHHHHHH
Confidence 345679999987666666553 3 333 323 445667888999999999999999999887 77889998777766
Q ss_pred HHHhhh-----------ccCCCCEEEEcCCCCHHHHHHHHHhhcCC-CeEE---EEeCcchhhc-c---CCCEeEEEEEc
Q 001586 245 AMCNNI-----------QKGKKKTFIIASNCHPQTIDICITRADGF-DIKV---VVSDLKDIDY-K---SGDVCGVLVQY 305 (1049)
Q Consensus 245 ~~a~~~-----------~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~-gi~v---~~v~~~~l~~-l---~~~t~~V~v~~ 305 (1049)
+-++.. ..++++.|+.++.+|++++..++. ++.. +.++ .+.|+++|++ + .++.+.|++..
T Consensus 179 i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~l-s~~~~~a~~~~f~HND~~~Le~~L~~~~~~~~~Vv~Eg 257 (476)
T PLN02955 179 MVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGVRL-AERQGNVEVFVYRHCDMYHLNSLLSSCKMKRKVVVTDS 257 (476)
T ss_pred HHHHhhccccccccccccCCCCcEEEEeccchHHHHHHHHh-ccccCCceEEEeCCCCHHHHHHHHHhCCCCceEEEEeC
Confidence 644310 013566789999999999999875 3333 3444 4456677765 4 33444444443
Q ss_pred -CCCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCC-----cc----cceEEEecC-ccccccCCCCCCceEEEE
Q 001586 306 -PGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPG-----EL----GADIVVGSA-QRFGVPMGYGGPHAAFLA 374 (1049)
Q Consensus 306 -pn~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~p~-----~~----GaDivvgs~-k~lg~P~~~GGP~~G~l~ 374 (1049)
-++.|.+.|+++|.++++++|++++| ++.++.+.+.+-| .+ ..||++++. |.||.. +||++
T Consensus 258 V~SmdGdiapL~eL~~L~~~~ga~LiV-DEAH~~Gv~G~~G~G~~e~~g~~~di~ii~~TLsKA~G~~-------GGfi~ 329 (476)
T PLN02955 258 LFSMDGDFAPMEELSQLRKKYGFLLVI-DDAHGTFVCGENGGGVAEEFNCEADVDLCVGTLSKAAGCH-------GGFIA 329 (476)
T ss_pred CCCCCCCcCCHHHHHHHHHHcCcEEEE-cccccCceecCCCCcHHHHhCCCCCCcEEEEeCccchhcc-------Cceee
Confidence 38999999999999999999999999 3566776664421 23 468999996 988642 35888
Q ss_pred EchhHHhcCCCceeeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHH-HhCcchHHHHHHHHHHH
Q 001586 375 TSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAV-YHGPEGLKTIAQRVHGL 453 (1049)
Q Consensus 375 ~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irrekaTsni~t~~~l~a~~aa~y~~-~~g~~Gl~~ia~~~~~~ 453 (1049)
+++++++.+- ..+.+.|.|+...+++.++...+ .+...+ ....++++++
T Consensus 330 gs~~~~~~l~-----------------------------~~~~~~ifStalpp~~aaa~laal~l~~~~-~~~r~~L~~n 379 (476)
T PLN02955 330 CSKKWKQLIQ-----------------------------SRGRSFIFSTAIPVPMAAAAYAAVVVARKE-KWRRKAIWER 379 (476)
T ss_pred cHHHHHHHHH-----------------------------HhCCCCeecccccHHHHHHHHHHHHHHhcC-HHHHHHHHHH
Confidence 8887665541 11223333333322233222111 111222 3466788899
Q ss_pred HHHHHHHhhcCCCeEEcCCCCcceEEEecCC---HHHHHHHHHHcCCeeeee-----c--CCeEEEEeccCCCHHHHHHH
Q 001586 454 AGTFALGLKKLGTVEVQGLPFFDTVKVKCAD---AHAIASAAYKIEMNLRVV-----D--SNTVTASFDETTTLEDVDKL 523 (1049)
Q Consensus 454 a~~l~~~L~~~g~~~v~~~~~~~~v~i~~~~---~~~v~~~L~~~gI~~~~~-----~--~~~vris~~~~~t~edid~l 523 (1049)
.+++++. .| +.+ . ...+.|.+.+ +.++.++|.++||++..+ + ...+|++++..||++|||+|
T Consensus 380 ~~~fr~~---~G-~~~-~---sPI~pI~ig~~~~a~~~~~~L~~~Gi~v~~i~yPtVP~g~~rLRi~lsA~Ht~edId~l 451 (476)
T PLN02955 380 VKEFKAL---SG-VDI-S---SPIISLVVGNQEKALKASRYLLKSGFHVMAIRPPTVPPNSCRLRVTLSAAHTTEDVKKL 451 (476)
T ss_pred HHHHHHh---cC-CCC-C---CCEEEEEeCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCceEEEeeCCCCCHHHHHHH
Confidence 9999884 35 543 1 2233343333 678899999999988643 1 24799999999999999999
Q ss_pred HHHHhC
Q 001586 524 FIVFAG 529 (1049)
Q Consensus 524 v~aL~~ 529 (1049)
+++|..
T Consensus 452 v~~L~~ 457 (476)
T PLN02955 452 ITALSS 457 (476)
T ss_pred HHHHHH
Confidence 999963
No 114
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.78 E-value=2.6e-17 Score=189.84 Aligned_cols=281 Identities=13% Similarity=0.046 Sum_probs=191.0
Q ss_pred HHHHHHHHHHHHHHhCCCC-cceEec-cchHHHHHHHHHHhhhccCCCCEEE-EcCCCCHHHHHHHHHhhcCCCeEEEEe
Q 001586 210 LESLLNFQTMIADLTGLPM-SNASLL-DEGTAAAEAMAMCNNIQKGKKKTFI-IASNCHPQTIDICITRADGFDIKVVVS 286 (1049)
Q Consensus 210 le~l~e~q~~ia~L~G~~~-~n~sl~-~~~Ta~~eA~~~a~~~~~~~g~~Vl-v~~~~Hps~~~~l~~~a~~~gi~v~~v 286 (1049)
.+.+.+.++.+++|+|.+. ..+.++ .+||+++||+++.+- . ++++++ +..+.+.... ...++..|.. ..+
T Consensus 47 ~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgt~~~Ea~~~nl~-~--~g~~~l~i~~G~fg~r~---~~~a~~~g~~-~~~ 119 (360)
T PRK05355 47 EAVAEEAEADLRELLNIPDNYKVLFLQGGASLQFAMVPMNLL-G--GGKKADYVDTGSWSKKA---IKEAKKYGEV-NVA 119 (360)
T ss_pred HHHHHHHHHHHHHHhCCCCCcEEEEEcCCchHHHHHHHHhcC-C--CCCeEEEEECCHHHHHH---HHHHHHhCCc-eEE
Confidence 3678888999999999843 334444 788999999887653 2 456654 4444543322 2224445654 322
Q ss_pred Cc---------chhhc--cCCCEeEEEEEc-CCCCeeec-cHHHHHHHHHhCCcEEEEEeccccccCC-CCCCcccceEE
Q 001586 287 DL---------KDIDY--KSGDVCGVLVQY-PGTEGEVL-DYGDFIKNAHANGVKVVMATDLLALTIL-KPPGELGADIV 352 (1049)
Q Consensus 287 ~~---------~~l~~--l~~~t~~V~v~~-pn~~G~i~-di~~I~~~ah~~galliV~a~~~alg~l-~~p~~~GaDiv 352 (1049)
.. .++++ ++++++.|.+++ .|++|.+. |+++| +|++++|++ ..++|.. .+..+| |++
T Consensus 120 ~~~~~~g~~~~~~~~~~~l~~~~~~V~~th~eTstGv~~~~i~~i------~g~l~vVDa-vss~g~~~idv~~~--d~~ 190 (360)
T PRK05355 120 ASSEDDGFTYIPPLDEWQLSDDAAYVHYTSNETIDGTEFHELPDT------GDVPLVADM-SSDILSRPIDVSKF--GLI 190 (360)
T ss_pred ecccccCCCCCCChhhccCCCCCCEEEEccCCCcceEecCccccc------CCCcEEEEc-CccccCccCCHHHc--cEE
Confidence 21 12222 667889998876 69999998 88877 799999954 2345443 344556 599
Q ss_pred EecCccccccCCCCCCceEEEEEchhHHhcCCCceeeeeecCCCCcceeeeccccccccccc-ccCCCccchhHHHHHHH
Q 001586 353 VGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRD-KATSNICTAQALLANMA 431 (1049)
Q Consensus 353 vgs~k~lg~P~~~GGP~~G~l~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irre-kaTsni~t~~~l~a~~a 431 (1049)
++|+||+.+| ||+|++++++++++++++.+ + ..+++.... .+.+ .+|+|+ ..++++.+
T Consensus 191 ~~ssqK~lgP-----~Glg~l~~s~~~l~~~~~~~-~----------~~~~~~~~~--~~~~~~~Tp~~---~~i~aL~~ 249 (360)
T PRK05355 191 YAGAQKNIGP-----AGLTIVIVREDLLGRALPSI-P----------SMLDYKTHA--DNDSMYNTPPT---FAIYLAGL 249 (360)
T ss_pred EEeccccccC-----CceEEEEECHHHHhhcccCC-C----------hHHHHHHHH--hcCCccCCCcH---HHHHHHHH
Confidence 9999554224 67999999999998886541 2 111111000 0111 377787 78888888
Q ss_pred HHHHHHhCcc-hHHHHHHHHHHHHHHHHHHhhcCCCeEEcCC--CCcc-eEEEecCC---HHHHHHHHHHcCCeeeee--
Q 001586 432 AMYAVYHGPE-GLKTIAQRVHGLAGTFALGLKKLGTVEVQGL--PFFD-TVKVKCAD---AHAIASAAYKIEMNLRVV-- 502 (1049)
Q Consensus 432 a~y~~~~g~~-Gl~~ia~~~~~~a~~l~~~L~~~g~~~v~~~--~~~~-~v~i~~~~---~~~v~~~L~~~gI~~~~~-- 502 (1049)
++ .++..+ |++++.+|..+++++++++|+++|.+..+.+ ...+ .++|..++ ..++.+.+.++||.+...
T Consensus 250 aL--~~i~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~rs~~v~sf~~~~~~~~~~~~~~~~~~Gi~~~~~~~ 327 (360)
T PRK05355 250 VF--KWLKEQGGVAAMEKRNQEKAALLYDAIDSSDFYRNPVAPEDRSRMNVPFTLADEELDKKFLAEAKAAGLVGLKGHR 327 (360)
T ss_pred HH--HHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCChhhcCCcEEEEEcCChHHHHHHHHHHHHCCCcccCCCC
Confidence 87 667778 8999999999999999999999972333322 2232 37777766 256767888899987433
Q ss_pred cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001586 503 DSNTVTASFDETTTLEDVDKLFIVFAG 529 (1049)
Q Consensus 503 ~~~~vris~~~~~t~edid~lv~aL~~ 529 (1049)
..+.+|+|+..+||++|||+|+++|+.
T Consensus 328 ~~g~vRiS~~~~nt~eei~~l~~~l~~ 354 (360)
T PRK05355 328 SVGGMRASIYNAMPLEGVQALVDFMKE 354 (360)
T ss_pred ccCcEEEECCCCCCHHHHHHHHHHHHH
Confidence 248899999999999999999999973
No 115
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.78 E-value=2.7e-17 Score=185.29 Aligned_cols=205 Identities=19% Similarity=0.277 Sum_probs=148.6
Q ss_pred cccccccccCccccccccccCcccccCCCCCchhhhhcHHHH--HHHHHHHHHHhhCCCccccccCchHHHHHHHHHHHH
Q 001586 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEM--FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIR 669 (1049)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~~G~~~~--i~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air 669 (1049)
+..|++++.-+...+.+ ..|-.++.++|.-. +.|+.+. +++.++.++++.|.|...+...+|| +++..++++
T Consensus 47 ld~~at~p~~~~Vldam-~~~~~~~~~nPh~~---~y~w~~~~~~E~aR~~VAklInAd~~dIiFts~A--TEs~Nlvl~ 120 (428)
T KOG1549|consen 47 LDNQATGPMDPRVLDAM-LPYLLEYLGNPHSR---SYGWKAEDAVEAAREQVAKLINADPSDIVFTSGA--TESNNLVLK 120 (428)
T ss_pred EecCcCCCCCHHHHHHH-HHHHHHhhcCCCcc---ccchhhhHHHHHHHHHHHHHhCCCCCcEEEeCCc--hHHHHHHHH
Confidence 34566654333333332 22222223445322 3454443 7889999999999998655555554 335666666
Q ss_pred HHHHhcCCCCCCEEEEcCCCCCccHHHH---HhcCCEEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCCc-cccc
Q 001586 670 AYHKARGDHHRNVCIIPVSAHGTNPATA---AMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPST-HGVY 745 (1049)
Q Consensus 670 ~y~~~~G~~~r~~VLip~saHg~~pa~a---~~~G~~Vv~V~~d~~g~iD~~~L~~~i~~~~~~taaV~it~Pn~-~G~i 745 (1049)
.+....+++....||+...+|.+.-.++ +-.|++|+.+|++.+|.+|++.+++.|+ ++|++|.|...|. .|+.
T Consensus 121 ~v~~~~~~~~~k~iitl~~eH~~v~~s~~~l~~~g~~Vt~lpv~~~~~~d~~~~~~~i~---~~T~lv~I~~Vnn~~gv~ 197 (428)
T KOG1549|consen 121 GVARFFGDKTKKHIITLQTEHPCVLDSCRALQEEGLEVTYLPVEDSGLVDISKLREAIR---SKTRLVSIMHVNNEIGVL 197 (428)
T ss_pred HhhccccccccceEEEecccCcchhHHHHHHHhcCeEEEEeccCccccccHHHHHHhcC---CCceEEEEEecccCcccc
Confidence 5544333312227888888898876653 4579999999999889999999999998 8999999998864 8999
Q ss_pred cccHHHHHHHHHHcCCEEEEeccccccccCcCCCCccCCcEEEeCCCcccccCCCCCCCceeEEEEcc
Q 001586 746 EEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKK 813 (1049)
Q Consensus 746 ~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~Pg~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~ 813 (1049)
. |++||+++|++.|++||+|+||..+...+ ..-++++|+++.++|||| |-||+|++++++
T Consensus 198 ~-Pv~EI~~icr~~~v~v~~DaAQavG~i~v-DV~eln~D~~s~s~HK~y------gp~~iGaLYvr~ 257 (428)
T KOG1549|consen 198 Q-PVKEIVKICREEGVQVHVDAAQAVGKIPV-DVQELNADFLSISAHKIY------GPPGIGALYVRR 257 (428)
T ss_pred c-cHHHHHHHhCcCCcEEEeehhhhcCCccc-cHHHcCchheeeeccccc------CCCcceEEEEcc
Confidence 9 79999999999999999999986444332 345789999999999998 456899999996
No 116
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.77 E-value=3e-17 Score=188.56 Aligned_cols=301 Identities=17% Similarity=0.109 Sum_probs=190.8
Q ss_pred HHHHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCEEEEEcCCC-
Q 001586 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA- 711 (1049)
Q Consensus 633 ~i~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~Vv~V~~d~- 711 (1049)
...++++.+++++|.+.+ +..++|++|.+.++.+++ ..++++||++...|..+...+...|++++.+++++
T Consensus 19 ~~~~~~~~la~~~~~~~~-~~~~sgt~al~~~l~~l~-------~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 90 (352)
T cd00616 19 KVREFEKAFAEYLGVKYA-VAVSSGTAALHLALRALG-------IGPGDEVIVPSFTFVATANAILLLGATPVFVDIDPD 90 (352)
T ss_pred HHHHHHHHHHHHhCCCeE-EEECCHHHHHHHHHHHcC-------CCCCCEEEeCCcchHHHHHHHHHcCCeEEEEecCCC
Confidence 356889999999998654 445677776655544332 12568899999888777777888999999999987
Q ss_pred CCCCCHHHHHHHHHhcCCCeEEEEEEcCCccccccccHHHHHHHHHHcCCEEEEeccccccccCcCC-CCccCCcEEEeC
Q 001586 712 KGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTS-PGYIGADVCHLN 790 (1049)
Q Consensus 712 ~g~iD~~~L~~~i~~~~~~taaV~it~Pn~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~-Pg~~GaDi~~~s 790 (1049)
++.+|+++|+++++ +++++|+++++ +|... |+++|.++|+++|+++++|+++..+...... .+.+ .|+.++|
T Consensus 91 ~~~~d~~~l~~~i~---~~~~~v~~~~~--~G~~~-~~~~i~~l~~~~~i~li~D~a~~~g~~~~~~~~~~~-~d~~~~S 163 (352)
T cd00616 91 TYNIDPELIEAAIT---PRTKAIIPVHL--YGNPA-DMDAIMAIAKRHGLPVIEDAAQALGATYKGRKVGTF-GDAGAFS 163 (352)
T ss_pred cCCcCHHHHHHhcC---cCCeEEEEECC--CCCcC-CHHHHHHHHHHcCCeEEEECCCCCCCeECCEEcccC-cceeEEc
Confidence 68899999999996 78999998864 68887 7999999999999999999997543222111 1222 5888888
Q ss_pred CC--cccccCCCCCCCceeEEEEcc-cccccCCCC-ccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchh
Q 001586 791 LH--KTFCIPHGGGGPGMGPIGVKK-HLAPFLPSH-PVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSK 866 (1049)
Q Consensus 791 ~h--K~f~~P~g~GGPg~G~i~~~~-~l~~~lpg~-~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~e 866 (1049)
+| |+|+ ++.+|++++++ ++.+.+... ..+.... .+.....+.+... ..+...++ +.....+
T Consensus 164 ~~~~K~~~------~~~gg~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~--~~~~~~aa-----~~~~~l~ 228 (352)
T cd00616 164 FHPTKNLT------TGEGGAVVTNDEELAERARLLRNHGRDRD--RFKYEHEILGYNY--RLSEIQAA-----IGLAQLE 228 (352)
T ss_pred CCCCCCCc------ccCceEEEECCHHHHHHHHHHHHcCCCCC--CCccccceeeecc--CcCHHHHH-----HHHHHHH
Confidence 66 8872 23346666653 444332100 0000000 0000000111100 00111111 1122234
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcc--CCeeeccCC-CceeeEEEEeccCccccCCCCHHHHHHHHHHCCcccCCCCCCC--
Q 001586 867 GLTEASKIAILNANYMAKRLEKH--YPILFRGVN-GTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPV-- 941 (1049)
Q Consensus 867 Gl~~~~~~~~~~a~yL~~~L~~~--~~v~~~g~~-g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~p~-- 941 (1049)
++.+..++..++++++.+.|+++ +++....+. ......+.+.++. ..+.+..++.+.|.++||.++....|.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~v~~~L~~~gI~~~~~~~~~~~ 305 (352)
T cd00616 229 KLDEIIARRREIAERYKELLADLPGIRLPDVPPGVKHSYHLYVIRLDP---EAGESRDELIEALKEAGIETRVHYPPLHH 305 (352)
T ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCceeeEEEEEEECC---cCCCCHHHHHHHHHHCCCCeeeecCcccc
Confidence 56666677788999999999875 444321110 1122334444431 014678899999999999764321111
Q ss_pred ----------------------CCEEEEEccCCCCHHHHHHHHHHHH
Q 001586 942 ----------------------PGTLMIEPTESESKEELDRYCDALI 966 (1049)
Q Consensus 942 ----------------------~~~lri~~t~~~t~eeid~fv~aL~ 966 (1049)
.+.+|++++..+|++|||+++++|+
T Consensus 306 ~~~~~~~~~~~~~~~~~a~~~~~~~l~l~~~~~~t~~di~~i~~~l~ 352 (352)
T cd00616 306 QPPYKKLLGYPPGDLPNAEDLAERVLSLPLHPSLTEEEIDRVIEALR 352 (352)
T ss_pred CHhhhhccCCCcCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHhC
Confidence 1679999999999999999999874
No 117
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.77 E-value=4.1e-17 Score=189.34 Aligned_cols=314 Identities=16% Similarity=0.151 Sum_probs=198.2
Q ss_pred cccccCCCCCCCCCcHHHHHHHHhCCcccc--ccCCChhhHhhhHHHHHHHHHHHHHHHhCCCCcceEeccchHHHHHHH
Q 001586 167 YKSFIGMGYYNTHVPPVILRNIMENPAWYT--QYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAM 244 (1049)
Q Consensus 167 ~~~~lG~g~y~~~~p~~i~~~~~~~~~~~t--~ytpyq~e~sqg~le~l~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~ 244 (1049)
.++|||....+...|+++. .+..-...+. ..+...++...|..+.+.++++.+|+++|.+. +.++++|+.+.-++
T Consensus 11 s~~YL~~~~~~~~~~~~~~-~~~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~~~~~--~l~~~sG~~a~~~~ 87 (370)
T PRK05937 11 TNDFLGFSRSDTLVHEVEK-RYRLYCRQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFHGAPE--AFIVPSGYMANLGL 87 (370)
T ss_pred CCCccCCCCCHHHHHHHHH-HHHHhccccCCCCCCCCCcCcccCChHHHHHHHHHHHHHhCCCe--EEEECChHHHHHHH
Confidence 4578888876666666553 3333110001 12345667888999999999999999999975 35566666444433
Q ss_pred HHHhhhccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCcchhhc-cC------CCEeEEEEEcC-CCCeeeccHH
Q 001586 245 AMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKDIDY-KS------GDVCGVLVQYP-GTEGEVLDYG 316 (1049)
Q Consensus 245 ~~a~~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~~~~l~~-l~------~~t~~V~v~~p-n~~G~i~di~ 316 (1049)
...+ .++++.|+++..+|+++...++.. ....+.+.+.|++++++ +. +++.+|++.++ |++|.+.|++
T Consensus 88 ~~~~---~~~~d~ii~d~~~H~sv~~~~~~~-~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~v~~v~s~~G~i~pl~ 163 (370)
T PRK05937 88 CAHL---SSVTDYVLWDEQVHISVVYSLSVI-SGWHQSFRHNDLDHLESLLESCRQRSFGRIFIFVCSVYSFKGTLAPLE 163 (370)
T ss_pred HHHh---CCCCCEEEEEhhhhHHHHHHHHHc-CCceEEecCCCHHHHHHHHHhhhccCCCcEEEEEecCCCCCCCccCHH
Confidence 2222 136788888899999999998753 33334455566777766 43 34667777877 6899999999
Q ss_pred HHHHHHHhCCcEEEEEeccccccCCCCCC-----cccc---eEEEecC-ccccccCCCCCCceEEEEEchhHHhcCCCce
Q 001586 317 DFIKNAHANGVKVVMATDLLALTILKPPG-----ELGA---DIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRI 387 (1049)
Q Consensus 317 ~I~~~ah~~galliV~a~~~alg~l~~p~-----~~Ga---Divvgs~-k~lg~P~~~GGP~~G~l~~~~~l~~~lpgri 387 (1049)
+|.++||++|++++|+ +.++.|.+...+ .||+ |+++.+. |.|| ++|+|+++.++ ....+..
T Consensus 164 eI~~l~~~~~~~livD-ea~~~G~~g~~g~g~~~~~~~~~~~~~~~tlsK~~g------~~G~~vl~~~~-~~~~~~~-- 233 (370)
T PRK05937 164 QIIALSKKYHAHLIVD-EAHAMGIFGDDGKGFCHSLGYENFYAVLVTYSKALG------SMGAALLSSSE-VKQDLML-- 233 (370)
T ss_pred HHHHHHHHcCCEEEEE-CCccccccCCCCCchHHhhCCCCCcEEEEechhhhh------cCceEEEcCHH-HHHHHHH--
Confidence 9999999999999994 345666544332 3553 2555665 6553 23466766543 2221100
Q ss_pred eeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHhhcCCCe
Q 001586 388 VGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTV 467 (1049)
Q Consensus 388 vG~s~d~~g~~~~~l~lqtreq~irrekaTsni~t~~~l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~g~~ 467 (1049)
+..+.+++.++ | +..+.++.+++ .++..+| +.+.+++.++.+++.+.|...+ .
T Consensus 234 -------------------~~~~~~~s~~~-~---~~~~~a~~aal--~~l~~~~-~~~~~~l~~l~~~l~~~l~~~~-~ 286 (370)
T PRK05937 234 -------------------NSPPLRYSTGL-P---PHLLISIQVAY--DFLSQEG-ELARKQLFRLKEYFAQKFSSAA-P 286 (370)
T ss_pred -------------------hCCCCeecCCC-C---HHHHHHHHHHH--HHHHhCc-HHHHHHHHHHHHHHHHhcCCCC-C
Confidence 00011222221 2 12344444554 4443445 4567788889999988886532 1
Q ss_pred EEcCCCCcceEEEecCCHHHHHHHHHHcCCeeeeec---CCeEEEEeccCCCHHHHHHHHHHHhC
Q 001586 468 EVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVVD---SNTVTASFDETTTLEDVDKLFIVFAG 529 (1049)
Q Consensus 468 ~v~~~~~~~~v~i~~~~~~~v~~~L~~~gI~~~~~~---~~~vris~~~~~t~edid~lv~aL~~ 529 (1049)
.. ...+.+......++.+.|.++||.++... .+.+|+|++.+||+||||+|+++|..
T Consensus 287 ----~~-~~~i~~~~~~~~~~~~~L~~~gi~v~~~~~~~~~~iRis~~~~~t~edid~l~~~L~~ 346 (370)
T PRK05937 287 ----GC-VQPIFLPGISEQELYSKLVETGIRVGVVCFPTGPFLRVNLHAFNTEDEVDILVSVLAT 346 (370)
T ss_pred ----CC-EEEEEeCChhHHHHHHHHHHCCeeEEeeCCCCCCEEEEEcCCCCCHHHHHHHHHHHHH
Confidence 01 11233321126788889999999886431 46899999999999999999999963
No 118
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.77 E-value=7.3e-17 Score=189.71 Aligned_cols=296 Identities=20% Similarity=0.265 Sum_probs=189.5
Q ss_pred HHHHHHH----HHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHH-HH--hcCCEE-
Q 001586 633 MFNNLGE----WLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT-AA--MCGMKI- 704 (1049)
Q Consensus 633 ~i~el~~----~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~-a~--~~G~~V- 704 (1049)
...++++ .+++++|.+.+.+.++||..|+.+++.+.. +++|+||++...|+.+-.. +. ..+..+
T Consensus 71 ~~~~lE~~~~~~la~l~g~~~alv~~~SG~~A~~~~l~al~--------~~GD~Vl~~~~~~~~~~~~g~~~~~~~~~~~ 142 (416)
T PRK13034 71 FVDEVEALAIERAKQLFGCDYANVQPHSGSQANGAVYLALL--------KPGDTILGMSLSHGGHLTHGAKVSLSGKWYN 142 (416)
T ss_pred HHHHHHHHHHHHHHHHhCCCceEEecCCcHHHHHHHHHHhc--------CCCCEEEEcCccceeeeecCCcceeccceee
Confidence 3445555 999999998766677899888866665542 3678999998888763111 11 112222
Q ss_pred -EEEcCCC-CCCCCHHHHHHHHHhcCCCeEEEEEEcCCccccccccHHHHHHHHHHcCCEEEEeccccccccCcC-CCCc
Q 001586 705 -VSVGTDA-KGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT-SPGY 781 (1049)
Q Consensus 705 -v~V~~d~-~g~iD~~~L~~~i~~~~~~taaV~it~Pn~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~-~Pg~ 781 (1049)
+.++.+. ++.+|++++++++++ .++++|+++.+. +|..- |+++|.++|+++|++++||+||..+..+.. .++.
T Consensus 143 ~~~~~~~~~~~~~d~~~le~~l~~--~~~klVi~~~~~-~g~~~-dl~~l~~la~~~g~~livD~Aha~G~~~~g~~~~~ 218 (416)
T PRK13034 143 AVQYGVDRLTGLIDYDEVEELAKE--HKPKLIIAGFSA-YPREL-DFARFREIADEVGALLMVDMAHIAGLVAAGEHPNP 218 (416)
T ss_pred eEEcccccccCCcCHHHHHHHHhh--cCCeEEEECCCc-ccccc-CHHHHHHHHHHcCCEEEEeCcccccCcccCCCCCC
Confidence 3444443 467999999999964 357788776544 57665 899999999999999999999865443322 1222
Q ss_pred -cCCcEEEeCCCcccccCCCCCCCceeEEEEccc-ccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHH
Q 001586 782 -IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH-LAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTY 859 (1049)
Q Consensus 782 -~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~-l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~ 859 (1049)
.++|++++++||+++ ||.+|++++++. +...+.. ... .+..++.. ....++.+.+.
T Consensus 219 ~~~~Di~~~s~~K~l~------g~~GG~v~~~~~~~~~~~~~-~~~-------------~~~~~~~~--~~~~aa~~~al 276 (416)
T PRK13034 219 FPHAHVVTTTTHKTLR------GPRGGMILTNDEEIAKKINS-AVF-------------PGLQGGPL--MHVIAAKAVAF 276 (416)
T ss_pred CCCceEEEEeCcccCC------CCCCeEEEECcHHHHHHHHh-hcC-------------CcccCCcc--HHHHHHHHHHH
Confidence 258999999999984 454577776653 3222110 000 00001111 11222223333
Q ss_pred HHHHchhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHHHCCcccCC--
Q 001586 860 IAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPT-- 936 (1049)
Q Consensus 860 l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~-~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~-- 936 (1049)
+..+. .+..+..++..+++++|+++|++. +++...+ ...+.+.+.+.. .+.....+.++|.++||.+..
T Consensus 277 ~~~~~-~~~~~~~~~l~~~a~~l~~~L~~~G~~~~~~~---~~t~i~~v~~~~----~~~~~~~~~~~L~~~GI~v~~~~ 348 (416)
T PRK13034 277 GEALQ-PEFKTYAKQVIANAQALAEVLKERGYDLVSGG---TDNHLLLVDLRP----KGLSGKDAEQALERAGITVNKNT 348 (416)
T ss_pred HHHhC-hhHHHHHHHHHHHHHHHHHHHHHcCCEeccCC---CCCcEEEEEcCC----CCCCHHHHHHHHHhCCcEEeccC
Confidence 34432 233455678889999999999875 5553211 123345565542 245667788999999999864
Q ss_pred ----CCCC-CCCEEEEEccC----CCCHHHHHHHHHHHHHHHH
Q 001586 937 ----MSWP-VPGTLMIEPTE----SESKEELDRYCDALISIRE 970 (1049)
Q Consensus 937 ----~~~p-~~~~lri~~t~----~~t~eeid~fv~aL~~i~~ 970 (1049)
..+| ++..||++++. ..+++|+|+++++|.+++.
T Consensus 349 ~p~~~~~p~~~~~lR~~~~~~t~~~~~~~di~~l~~~l~~~~~ 391 (416)
T PRK13034 349 VPGDTESPFVTSGIRIGTPAGTTRGFGEAEFREIANWILDVLD 391 (416)
T ss_pred CCCCCcCCCCCCeeEeCcHHHHhCCCCHHHHHHHHHHHHHHHh
Confidence 2233 45689999988 6779999999999998854
No 119
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.77 E-value=3.9e-17 Score=174.94 Aligned_cols=301 Identities=15% Similarity=0.120 Sum_probs=216.3
Q ss_pred HHHHHHHHHHhCCCCcceEeccchHHHHHHHHH-HhhhccCCCCEEEEcC-CCCHHHHHHHHHhhcCCC--eEEEE-eCc
Q 001586 214 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAM-CNNIQKGKKKTFIIAS-NCHPQTIDICITRADGFD--IKVVV-SDL 288 (1049)
Q Consensus 214 ~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~-a~~~~~~~g~~Vlv~~-~~Hps~~~~l~~~a~~~g--i~v~~-v~~ 288 (1049)
...-..+|-|.|+...++...|+.+.-+.-.+. +++. +++++|||++ ..+|.-..+.+..+.-.+ .++.. +.+
T Consensus 79 ~~lgdklApLiGA~~~Evvv~dtts~nl~k~L~aalr~--~~~r~vIv~E~~~fpTdly~a~g~~~~~~~~~~~~~~~~P 156 (407)
T COG3844 79 ERLGDKLAPLIGARAGEVVVTDTTSINLFKVLAAALRP--QEGRRVIVSEGDNFPTDLYIAEGLADLLGIGYDLEGVIAP 156 (407)
T ss_pred hHHHHHhhhhhcCCCCceEEeCCcchHHHHHHHHHhcc--CCCceEEeecCCCCCcchhhhcchhhhhcccccceeeeCh
Confidence 334468999999998888888887755544443 3333 3677888887 678887777655554333 23332 234
Q ss_pred chhhc-cCCCEeEEEEEcCC-CCeeeccHHHHHHHHHhCCcEEEEEeccccccCC-CCCCcccceEEEecCccccccCCC
Q 001586 289 KDIDY-KSGDVCGVLVQYPG-TEGEVLDYGDFIKNAHANGVKVVMATDLLALTIL-KPPGELGADIVVGSAQRFGVPMGY 365 (1049)
Q Consensus 289 ~~l~~-l~~~t~~V~v~~pn-~~G~i~di~~I~~~ah~~galliV~a~~~alg~l-~~p~~~GaDivvgs~k~lg~P~~~ 365 (1049)
.++++ ++++++.|++++.| .+|...|+.+|.++||++|++++.+ =.++.|.+ ..-..+|||+.++++.++. .
T Consensus 157 ~~~~~~~~dd~AvV~L~~V~y~TGql~dm~aiT~~AH~~galv~wD-LAHsaGavp~~Lh~~gaDfaigcsyKYL----N 231 (407)
T COG3844 157 RALEEAITDDVAVVLLSHVNYKTGQLLDMRAITALAHQHGALVGWD-LAHSAGAVPVDLHAAGADFAIGCSYKYL----N 231 (407)
T ss_pred HHHHHhhccceEEEEeccccccccceeeHHHHHHHHHhcCceEEee-hhcccCCcceeecccCCCeeeeeeceec----c
Confidence 56766 88999999999987 5899999999999999999998883 12455544 2447899999999995542 3
Q ss_pred CCCce-EEEEEchhHHhcCCCceeeeeecCCCCcceeeecc-cccccccccccCCCccchhHHHHHHHHH-HHHHhCcch
Q 001586 366 GGPHA-AFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQ-TREQHIRRDKATSNICTAQALLANMAAM-YAVYHGPEG 442 (1049)
Q Consensus 366 GGP~~-G~l~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lq-treq~irrekaTsni~t~~~l~a~~aa~-y~~~~g~~G 442 (1049)
||||+ ||+++.+++.+..-+++-||..- .++ |.+.-. +--.+++| +.|++|..+.+.+-- -+.....-+
T Consensus 232 gGPGapa~l~v~~~h~e~~~~~lsgW~gh--a~p-f~m~~~y~p~~ga~r-----f~~gt~~V~s~aal~~aLDifa~~~ 303 (407)
T COG3844 232 GGPGAPAGLFVAPRHRERSWPPLSGWWGH--ARP-FAMEEVYAPGPGARR-----FLCGTQPVLSLAALEGALDIFADVD 303 (407)
T ss_pred CCCCCceeEEeccccccccccccccccCC--CCc-chhhhccCcCccccc-----eeeCCcchhhhHHHhhhhhhhhhcC
Confidence 77876 89999998887777788887421 122 444210 11234554 466666665433211 135666778
Q ss_pred HHHHHHHHHHHHHHHHHHhhcC-C--CeEEcCC----CCcceEEEecCCHHHHHHHHHHcCCeeeeecCCeEEEEecc-C
Q 001586 443 LKTIAQRVHGLAGTFALGLKKL-G--TVEVQGL----PFFDTVKVKCADAHAIASAAYKIEMNLRVVDSNTVTASFDE-T 514 (1049)
Q Consensus 443 l~~ia~~~~~~a~~l~~~L~~~-g--~~~v~~~----~~~~~v~i~~~~~~~v~~~L~~~gI~~~~~~~~~vris~~~-~ 514 (1049)
+.++.++...++.|+.+.++.. + ++++..+ .+...|++..+.+.+|.+.|.++||....-.++.+|+.+++ |
T Consensus 304 i~~lR~kSlaLTd~fieLvEa~~~~~~l~l~tPr~~~~rGsqvS~~hp~~~~V~qaLi~rGVigD~R~P~vlRfgftPlY 383 (407)
T COG3844 304 ITELRKKSLALTDYFIELVEARCEYYGLTLVTPRAHEERGSQVSLYHPHGYQVMQALIDRGVIGDFREPDVLRFGFTPLY 383 (407)
T ss_pred HHHHHHhhhHHHHHHHHHHHhccccCCcEEeccchhhhccceeeEecCcHHHHHHHHHHcCccccccCCCeeeecCccce
Confidence 9999999999999999998864 2 3677643 23346888888889999999999997765568999999998 8
Q ss_pred CCHHHHHHHHHHHhC
Q 001586 515 TTLEDVDKLFIVFAG 529 (1049)
Q Consensus 515 ~t~edid~lv~aL~~ 529 (1049)
++.+|+-..+++|..
T Consensus 384 ~~~~DVw~AV~~L~e 398 (407)
T COG3844 384 VSFVDVWDAVDALEE 398 (407)
T ss_pred echhHHHHHHHHHHH
Confidence 999999998888863
No 120
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.77 E-value=7.1e-17 Score=188.63 Aligned_cols=294 Identities=18% Similarity=0.259 Sum_probs=194.0
Q ss_pred cHHHHHHHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCEEEEEc
Q 001586 629 GYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVG 708 (1049)
Q Consensus 629 G~~~~i~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~Vv~V~ 708 (1049)
|..+...++++.+++++|.+.. +..++|++|..+++.++. +++|+|+++...|.+....+.+.+.+.+.++
T Consensus 80 G~~~~~~~le~~ia~~~g~~~~-ii~~~~~~a~~~~~~~l~--------~~gd~vi~~~~~~~s~~~~~~~~~~~~~~~~ 150 (393)
T TIGR01822 80 GTQDIHKELEAKIAAFLGTEDT-ILYASCFDANGGLFETLL--------GAEDAIISDALNHASIIDGVRLCKAKRYRYA 150 (393)
T ss_pred CChHHHHHHHHHHHHHhCCCcE-EEECchHHHHHHHHHHhC--------CCCCEEEEeccccHHHHHHHHhcCCceEEeC
Confidence 5556677899999999998764 444566666644433321 2578999998888776666677777765544
Q ss_pred CCCCCCCCHHHHHHHHHhc---CCCeEEEEEEcC-CccccccccHHHHHHHHHHcCCEEEEeccccccccCcC------C
Q 001586 709 TDAKGNINIEELRKAAEAN---RDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT------S 778 (1049)
Q Consensus 709 ~d~~g~iD~~~L~~~i~~~---~~~taaV~it~P-n~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~------~ 778 (1049)
.+|+++|++++++. +.+|++|++..+ |.+|.+. |+++|+++|+++|+++++|+++..+..+.. .
T Consensus 151 -----~~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~tG~~~-~l~~i~~la~~~~~~li~De~~~~g~~~~~~~~~~~~ 224 (393)
T TIGR01822 151 -----NNDMADLEAQLKEARAAGARHRLIATDGVFSMDGVIA-PLDEICDLADKYDALVMVDECHATGFLGPTGRGSHEL 224 (393)
T ss_pred -----CCCHHHHHHHHHhhhhcCCCceEEEEeCCccCCCCcC-CHHHHHHHHHHcCCEEEEECCccccCcCCCCCchHHh
Confidence 38999999999742 227888888776 5689987 799999999999999999999753332211 0
Q ss_pred CC-ccCCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHH
Q 001586 779 PG-YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISY 857 (1049)
Q Consensus 779 Pg-~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~ 857 (1049)
.+ ..++|++++++||++ ||+.+|++++++++.+.+.... .....++.. ....+.++.
T Consensus 225 ~~~~~~~di~~~s~sK~l------~g~r~G~~~~~~~~~~~l~~~~-----------~~~~~~~~~-----~~~~~~a~~ 282 (393)
T TIGR01822 225 CGVMGRVDIITGTLGKAL------GGASGGFTTARKEVVELLRQRS-----------RPYLFSNSL-----PPAVVGASI 282 (393)
T ss_pred cCCCCCCeEEEEEChHHh------hCCCcEEEEeCHHHHHHHHHhC-----------ccceecCCC-----CHHHHHHHH
Confidence 11 125799999999987 3567799998876655432100 000001111 011122233
Q ss_pred HHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHHHCCcccCC
Q 001586 858 TYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPT 936 (1049)
Q Consensus 858 a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~-~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~ 936 (1049)
+++..+ ++..+..++..++.+++.+.|++. +.+. ++.++. +.+.+.. ..+..+++++|.++||.+..
T Consensus 283 ~al~~~--~~~~~~~~~~~~~~~~l~~~L~~~g~~~~--~~~~~~---~~i~~~~-----~~~~~~l~~~L~~~gI~v~~ 350 (393)
T TIGR01822 283 KVLEML--EASNELRDRLWANTRYFRERMEAAGFDIK--PADHPI---IPVMLYD-----AVLAQRFARRLLEEGIYVTG 350 (393)
T ss_pred HHHHHH--hcCHHHHHHHHHHHHHHHHHHHHcCCCCC--CCCCCE---EEEEeCC-----HHHHHHHHHHHHHCCeeEee
Confidence 444443 234455566778889999999874 4432 212222 2222221 12467899999999998764
Q ss_pred CCCCC----CCEEEEEccCCCCHHHHHHHHHHHHHHHHH
Q 001586 937 MSWPV----PGTLMIEPTESESKEELDRYCDALISIREE 971 (1049)
Q Consensus 937 ~~~p~----~~~lri~~t~~~t~eeid~fv~aL~~i~~~ 971 (1049)
..||. ...+|++++..+|++|||+++++|+++.++
T Consensus 351 ~~~~~~~~~~~~iRis~~~~~t~edi~~~~~~l~~~~~~ 389 (393)
T TIGR01822 351 FFYPVVPKGQARIRVQISAAHTEEQLDRAVEAFTRIGRE 389 (393)
T ss_pred eCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHH
Confidence 44442 246999999999999999999999988765
No 121
>PRK07179 hypothetical protein; Provisional
Probab=99.77 E-value=8.6e-17 Score=188.99 Aligned_cols=286 Identities=17% Similarity=0.193 Sum_probs=189.0
Q ss_pred HHHHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCEEEEEcCCCC
Q 001586 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK 712 (1049)
Q Consensus 633 ~i~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~Vv~V~~d~~ 712 (1049)
...++++.+++++|.+.+ +..++|++++..++.++. .+++.|+++...|.+....+...|.+++.++.
T Consensus 100 ~~~~le~~la~~~g~~~~-~~~~sG~~An~~~l~~l~--------~~g~~v~~~~~~h~s~~~~~~~~g~~~~~~~~--- 167 (407)
T PRK07179 100 PKPQFEKKLAAFTGFESC-LLCQSGWAANVGLLQTIA--------DPNTPVYIDFFAHMSLWEGVRAAGAQAHPFRH--- 167 (407)
T ss_pred HHHHHHHHHHHHhCCCcE-EEECCHHHHHHHHHHHhC--------CCCCEEEEECCcCHHHHHHHHHCCCeEEEecC---
Confidence 345778899999999765 567888877755554432 14577888887776665556778888776654
Q ss_pred CCCCHHHHHHHHHhcCCCeEEEEEEcCC-ccccccccHHHHHHHHHHcCCEEEEeccccccccCcC------CCC-ccCC
Q 001586 713 GNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT------SPG-YIGA 784 (1049)
Q Consensus 713 g~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~------~Pg-~~Ga 784 (1049)
.|+++|++++++ .++++|++++|+ .+|.+. |+++|+++|+++|+++++|+++..+..+.. ..+ ..++
T Consensus 168 --~d~~~l~~~l~~--~~~~lV~v~~v~n~tG~i~-pl~~I~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~v 242 (407)
T PRK07179 168 --NDVDHLRRQIER--HGPGIIVVDSVYSTTGTIA-PLADIVDIAEEFGCVLVVDESHSLGTHGPQGAGLVAELGLTSRV 242 (407)
T ss_pred --CCHHHHHHHHHh--cCCeEEEECCCCCCCCccc-cHHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHhcCCCCCC
Confidence 699999999973 247788888884 689998 799999999999999999999754322211 001 1246
Q ss_pred cEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHc
Q 001586 785 DVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMG 864 (1049)
Q Consensus 785 Di~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG 864 (1049)
|+++.++||+|+ +++|++++++++.+.++... . ....+.. +... .++++.+.+..+.
T Consensus 243 di~~~S~sK~~g-------~~~G~l~~~~~~~~~~~~~~--~---------~~~~~~t---~~~~--~~aa~~aal~~~~ 299 (407)
T PRK07179 243 HFITASLAKAFA-------GRAGIITCPRELAEYVPFVS--Y---------PAIFSST---LLPH--EIAGLEATLEVIE 299 (407)
T ss_pred CEEEeechHhhh-------ccCeEEEeCHHHHHHHHHhC--c---------CeeeCCC---CCHH--HHHHHHHHHHHHh
Confidence 999999999883 24789998877655442100 0 0000111 1111 1112233344442
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHHHCCcccCCCCCC---
Q 001586 865 SKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWP--- 940 (1049)
Q Consensus 865 ~eGl~~~~~~~~~~a~yL~~~L~~~-~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~p--- 940 (1049)
.. .+..++..++++++.++|+++ +++. +. ++. +.+.+.. ..+...+.+.|.++||.+.....|
T Consensus 300 ~~--~~~~~~l~~~~~~l~~~L~~~g~~v~--~~-~~i---~~l~~~~-----~~~~~~~~~~L~~~GI~~~~~~~p~~~ 366 (407)
T PRK07179 300 SA--DDRRARLHANARFLREGLSELGYNIR--SE-SQI---IALETGS-----ERNTEVLRDALEERNVFGAVFCAPATP 366 (407)
T ss_pred cC--HHHHHHHHHHHHHHHHHHHHcCCCCC--CC-CCE---EEEEeCC-----HHHHHHHHHHHHHCCceEeeecCCCCC
Confidence 21 345566778899999999875 4432 21 222 2233321 123567888999999975422223
Q ss_pred -CCCEEEEEccCCCCHHHHHHHHHHHHHHHHH
Q 001586 941 -VPGTLMIEPTESESKEELDRYCDALISIREE 971 (1049)
Q Consensus 941 -~~~~lri~~t~~~t~eeid~fv~aL~~i~~~ 971 (1049)
..+.+||+++..+|++|+|+++++|++++++
T Consensus 367 ~~~~~lRis~~~~~t~edi~~~~~~l~~~~~~ 398 (407)
T PRK07179 367 KNRNLIRLSLNADLTASDLDRVLEVCREARDE 398 (407)
T ss_pred CCCceEEEEECCCCCHHHHHHHHHHHHHHHHh
Confidence 2478999999999999999999999998766
No 122
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=99.76 E-value=2.5e-16 Score=181.73 Aligned_cols=331 Identities=19% Similarity=0.239 Sum_probs=218.1
Q ss_pred ccccccccccCccccccccccCcccccCCCCCchhhhhcHHHHHHHHHHHHHHhhCCC--ccccccCchHHHHHHHHHHH
Q 001586 591 MIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFD--SFSLQPNAGAAGEYAGLMVI 668 (1049)
Q Consensus 591 ~i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~~G~~~~i~el~~~la~l~G~~--~~~l~~~sGa~ge~a~l~ai 668 (1049)
+..+|++.+++-.+++.+... -.++++..+.. +...++.+.|.+++..+ ...++.+||+.+++++++.+
T Consensus 67 v~~~GH~hP~Vv~Av~~q~~~-~~h~~~~~~~~--------e~~v~~ae~L~~~~p~~~~~~~~f~~sGaeA~E~AiKiA 137 (447)
T COG0160 67 VLNLGHNHPRVVEAVKRQLAK-LNHTHTRDLYY--------EPYVELAEKLTALAPGSGLKKVFFGNSGAEAVEAAIKIA 137 (447)
T ss_pred hhccCCCCHHHHHHHHHHHHH-hhcccCCcccc--------hhHHHHHHHHHHhCCcccCCeEEecCCcHHHHHHHHHHH
Confidence 445677766665555555211 11111111110 23446778888887653 23588999999999999999
Q ss_pred HHHHHhcCCCCCCEEE-EcCCCCCccHHHHHhcC-------------CEEEEEcCCCCC------------CCCHHHHHH
Q 001586 669 RAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCG-------------MKIVSVGTDAKG------------NINIEELRK 722 (1049)
Q Consensus 669 r~y~~~~G~~~r~~VL-ip~saHg~~pa~a~~~G-------------~~Vv~V~~d~~g------------~iD~~~L~~ 722 (1049)
|.|- +|..|| ...++||.-..+..+.| -.|..+|..... .-..+.++.
T Consensus 138 r~~T------gr~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~~~~~~e~ 211 (447)
T COG0160 138 RAYT------GRPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDALEYIER 211 (447)
T ss_pred HHHh------CCCcEEEECCcccccchhhHHhccCccccccCCCCCCCCeEEecCCccccCcccCchhhhhHHHHHHHHH
Confidence 8862 344455 78899997666543311 137777764321 113445666
Q ss_pred HHHhc---CCCeEEEEEEcC-Cccccccc---cHHHHHHHHHHcCCEEEEeccccccccCcCCCCcc--------CCcEE
Q 001586 723 AAEAN---RDNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI--------GADVC 787 (1049)
Q Consensus 723 ~i~~~---~~~taaV~it~P-n~~G~i~~---di~eI~~lah~~G~ll~vD~A~~~a~~gl~~Pg~~--------GaDi~ 787 (1049)
.+.+. ..++++++++.. +.-|++.+ .++++.++|++||+++|+|++ |.|+.+.|.| -+||+
T Consensus 212 ~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEV----QtG~GRTG~~fa~E~~gv~PDiv 287 (447)
T COG0160 212 ALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEV----QTGFGRTGKMFAFEHFGVEPDIV 287 (447)
T ss_pred HHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecc----ccCCCccccchhhhhcCCCCCEE
Confidence 55432 246999988866 45787763 489999999999999999986 7788888864 37999
Q ss_pred EeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhh
Q 001586 788 HLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (1049)
Q Consensus 788 ~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eG 867 (1049)
++ .|.++ + |-.+|.+..++++....|+... + ++.|++..++++.+.|..+-+++
T Consensus 288 t~--aK~ig----~-G~Pl~avv~r~ei~~~~~g~~~----------------~---Tf~GNpva~Aaa~AvL~vie~e~ 341 (447)
T COG0160 288 TL--AKSLG----G-GLPLSAVVGRAEIMDWPPGGHG----------------G---TFGGNPVACAAALAVLDVIEEEN 341 (447)
T ss_pred Ee--ccccc----C-CCceeEEeccHHhcccCCcccC----------------C---CCCcCHHHHHHHHHHHHHHHHcc
Confidence 88 48763 3 5556667778887775444321 1 14467788888999999888887
Q ss_pred HHHHHHHHHHHHHHHHHHHhcc---CCeee--ccCCCc-eeeEEEEeccCccccCCCCHHHHHHHHHHCCcccCCCCCCC
Q 001586 868 LTEASKIAILNANYMAKRLEKH---YPILF--RGVNGT-VAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPV 941 (1049)
Q Consensus 868 l~~~~~~~~~~a~yL~~~L~~~---~~v~~--~g~~g~-~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~p~ 941 (1049)
|.+ ++.+..+||+++|.++ +.++- .|. |. ...||+-|-.+ ++.+......|.+++.++|+...++. +.
T Consensus 342 L~~---~a~~~G~~l~~~L~~l~~~~~~IgdVRG~-Glm~giE~v~d~~t-~~p~~~~~~~i~~~~~~~Glil~~~G-~~ 415 (447)
T COG0160 342 LLE---RAAELGEYLRDRLEELQEKHPLIGDVRGL-GLMIGVELVKDRDT-KEPDAELAAKIVARAFERGLLLLTCG-PH 415 (447)
T ss_pred HHH---HHHHHHHHHHHHHHHHHhhcCceeccccc-ceEEEEEEecCCCC-CCCCHHHHHHHHHHHHHcCCEEeccC-CC
Confidence 664 4557788999999875 44321 121 22 23344333110 11111235678899999998765543 23
Q ss_pred CCEEEEEccCCCCHHHHHHHHHHHHHHHHHH
Q 001586 942 PGTLMIEPTESESKEELDRYCDALISIREEI 972 (1049)
Q Consensus 942 ~~~lri~~t~~~t~eeid~fv~aL~~i~~~i 972 (1049)
.+.+||.|....+++++|+++++|.+++++.
T Consensus 416 ~nviRi~PPL~is~e~~d~~l~il~~al~~~ 446 (447)
T COG0160 416 GNVLRILPPLTISDEELDEGLDILEEALKEA 446 (447)
T ss_pred CcEEEEeCCcccCHHHHHHHHHHHHHHHHhh
Confidence 5899999999999999999999999987653
No 123
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.76 E-value=5.2e-17 Score=186.26 Aligned_cols=287 Identities=17% Similarity=0.193 Sum_probs=188.8
Q ss_pred HHHHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCEEEEEcCCCC
Q 001586 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK 712 (1049)
Q Consensus 633 ~i~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~Vv~V~~d~~ 712 (1049)
...++++.+++++|.+. .+..++|+++.++++.++. +++++||++...|......+...|.+++.++.
T Consensus 47 ~~~~l~~~la~~~~~~~-~iv~~sg~~a~~~~~~~~~--------~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~--- 114 (349)
T cd06454 47 LHEELEEELAEFHGKEA-ALVFSSGYAANDGVLSTLA--------GKGDLIISDSLNHASIIDGIRLSGAKKRIFKH--- 114 (349)
T ss_pred HHHHHHHHHHHHhCCCC-EEEeccHHHHHHHHHHHhc--------CCCCEEEEehhhhHHHHHHHHHcCCceEEecC---
Confidence 45578889999999875 4667777776654443332 25688999888777666667788999988864
Q ss_pred CCCCHHHHHHHHHhcC--CCeEEEEEEcCC-ccccccccHHHHHHHHHHcCCEEEEeccccccccCc-------CCCCcc
Q 001586 713 GNINIEELRKAAEANR--DNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGL-------TSPGYI 782 (1049)
Q Consensus 713 g~iD~~~L~~~i~~~~--~~taaV~it~Pn-~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl-------~~Pg~~ 782 (1049)
+|++++++++++.. +++++|++++|+ .+|.+. |+++|+++|+++|+++++|+++..+..+. ......
T Consensus 115 --~~~~~le~~i~~~~~~~~~~~v~~~~~~~~tG~~~-~~~~i~~~~~~~~~~livD~a~~~g~~~~~~~~~~~~~~~~~ 191 (349)
T cd06454 115 --NDMEDLEKLLREARRPYGKKLIVTEGVYSMDGDIA-PLPELVDLAKKYGAILFVDEAHSVGVYGPHGRGVEEFGGLTD 191 (349)
T ss_pred --CCHHHHHHHHHHhhccCCCeEEEEeccccCCCCcc-CHHHHHHHHHHcCCEEEEEccccccccCCCCCChhhhccccc
Confidence 68899999997542 467888888884 589998 79999999999999999999974322211 011345
Q ss_pred CCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHH
Q 001586 783 GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAM 862 (1049)
Q Consensus 783 GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~ 862 (1049)
+.|+++.++||+|+. +| |+++.++++.+.+...... . ..++..+ ...+.++.+.+..
T Consensus 192 ~~~i~~~s~sK~~~~------~g-G~i~~~~~~~~~~~~~~~~-------~---~~~~~~~------~~~~~a~~~~l~~ 248 (349)
T cd06454 192 DVDIIMGTLGKAFGA------VG-GYIAGSKELIDYLRSYARG-------F---IFSTSLP------PAVAAAALAALEV 248 (349)
T ss_pred cCcEEEeechhhhcc------cC-CEEECCHHHHHHHHHhchh-------h---hccCCCC------HHHHHHHHHHHHH
Confidence 789999999999852 33 6777776655433211000 0 0001111 1122233344444
Q ss_pred HchhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHHHCCcccCCCCCC-
Q 001586 863 MGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWP- 940 (1049)
Q Consensus 863 lG~eGl~~~~~~~~~~a~yL~~~L~~~-~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~p- 940 (1049)
+.. +....++..++++++.+.|++. +.+. ++.+... +.+.+. .+.+..++.+.|.++||.+....++
T Consensus 249 ~~~--~~~~~~~~~~~~~~l~~~l~~~g~~~~--~~~~~~~--~~~~~~-----~~~~~~~~~~~L~~~gI~~~~~~~~~ 317 (349)
T cd06454 249 LQG--GPERRERLQENVRYLRRGLKELGFPVG--GSPSHII--PPLIGD-----DPAKAVAFSDALLERGIYVQAIRYPT 317 (349)
T ss_pred Hhc--CHHHHHHHHHHHHHHHHHHHhcCCccc--CCCCCcE--EEEeCC-----ChHHHHHHHHHHHhCCceEEEecCCc
Confidence 422 3445667778899999999875 3332 2112111 122111 1235678999999999987533332
Q ss_pred ---CCCEEEEEccCCCCHHHHHHHHHHHHHH
Q 001586 941 ---VPGTLMIEPTESESKEELDRYCDALISI 968 (1049)
Q Consensus 941 ---~~~~lri~~t~~~t~eeid~fv~aL~~i 968 (1049)
..+++|++++..++++|+++++++|+++
T Consensus 318 ~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 348 (349)
T cd06454 318 VPRGTARLRISLSAAHTKEDIDRLLEALKEV 348 (349)
T ss_pred cCCCCCeEEEEEeCCCCHHHHHHHHHHHHHh
Confidence 1478999999989999999999999764
No 124
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.76 E-value=1.1e-16 Score=188.69 Aligned_cols=291 Identities=20% Similarity=0.253 Sum_probs=188.8
Q ss_pred HHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHH-----HHhcCCEEEEEcCCC
Q 001586 637 LGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT-----AAMCGMKIVSVGTDA 711 (1049)
Q Consensus 637 l~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~-----a~~~G~~Vv~V~~d~ 711 (1049)
+++.+++++|.+...+.+++|++|...++.++ . +++++||++...|+.+... ....|++++.++++.
T Consensus 76 ~~~~la~~~g~~~~~i~~~sgt~al~~~l~~l---~-----~~gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 147 (416)
T PRK00011 76 AIDRAKELFGAEYANVQPHSGSQANAAVYFAL---L-----KPGDTILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGVDE 147 (416)
T ss_pred HHHHHHHHhCCCceeeecCCchHHHHHHHHHh---c-----CCCCEEEEeccccCCccccccccccccceeeEeecCcCc
Confidence 56689999999876566667777664443332 1 2578899998888765332 223567888888874
Q ss_pred -CCCCCHHHHHHHHHhcCCCeEEEEEEcCCccccccccHHHHHHHHHHcCCEEEEeccccccccCc---CCCCccCCcEE
Q 001586 712 -KGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGL---TSPGYIGADVC 787 (1049)
Q Consensus 712 -~g~iD~~~L~~~i~~~~~~taaV~it~Pn~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl---~~Pg~~GaDi~ 787 (1049)
++.+|+++|++++++ .++++|+++.++ +|... |+++|+++|+++|+++++|+|+..+.... ..+.. ++|++
T Consensus 148 ~~~~~d~~~l~~~i~~--~~~k~v~~~~~~-~~~~~-~~~~I~~la~~~~~~livD~a~~~g~~~~g~~~~~~~-~~di~ 222 (416)
T PRK00011 148 ETGLIDYDEVEKLALE--HKPKLIIAGASA-YSRPI-DFKRFREIADEVGAYLMVDMAHIAGLVAAGVHPSPVP-HADVV 222 (416)
T ss_pred ccCCcCHHHHHHHHHh--cCCCEEEECCCc-CCCcc-CHHHHHHHHHHcCCEEEEECcchhcccccCccCCCCC-CCcEE
Confidence 589999999999973 367788776543 56655 79999999999999999999975433211 12333 78999
Q ss_pred EeCCCcccccCCCCCCCceeEEEEc-ccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchh
Q 001586 788 HLNLHKTFCIPHGGGGPGMGPIGVK-KHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSK 866 (1049)
Q Consensus 788 ~~s~hK~f~~P~g~GGPg~G~i~~~-~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~e 866 (1049)
++++||+| +||.+|+++++ +++...+.... .. ...++ +. ....++...+.+. ...+
T Consensus 223 ~~S~~K~l------~g~~gg~i~~~~~~~~~~l~~~~------------~~--~~~~~-~~-~~~~aa~~~a~~~-~~~~ 279 (416)
T PRK00011 223 TTTTHKTL------RGPRGGLILTNDEELAKKINSAV------------FP--GIQGG-PL-MHVIAAKAVAFKE-ALEP 279 (416)
T ss_pred EecCCcCC------CCCCceEEEeCCHHHHHHHHHHh------------Cc--cccCC-cc-HHHHHHHHHHHHH-HHhh
Confidence 99999987 36777888885 45554431100 00 00111 11 1112222223333 3345
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHHHCCcccCCCC--C----
Q 001586 867 GLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMS--W---- 939 (1049)
Q Consensus 867 Gl~~~~~~~~~~a~yL~~~L~~~-~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~--~---- 939 (1049)
++.+..++..+++++++++|++. +++. .+ +...+-+.+++++ .+.+..++.+.|.++||.+.... +
T Consensus 280 ~~~~~~~~~~~~~~~l~~~L~~~g~~~~-~~--~~~~~~~~i~~~~----~~~~~~~~~~~L~~~GI~v~~~~~p~~~~~ 352 (416)
T PRK00011 280 EFKEYAQQVVKNAKALAEALAERGFRVV-SG--GTDNHLVLVDLRS----KGLTGKEAEAALEEANITVNKNAVPFDPRS 352 (416)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCCCeee-ec--CCCCeEEEEeCcc----cCCCHHHHHHHHHHcCcEEccCcCCCCCCC
Confidence 67778888889999999999875 4442 11 1122334556531 13466789999999999875321 1
Q ss_pred C-CCCEEEEEccC----CCCHHHHHHHHHHHHHHHH
Q 001586 940 P-VPGTLMIEPTE----SESKEELDRYCDALISIRE 970 (1049)
Q Consensus 940 p-~~~~lri~~t~----~~t~eeid~fv~aL~~i~~ 970 (1049)
| .+..+|++... ..+++|+|+++++|++++.
T Consensus 353 ~~~~~~~Ri~~~~~~~~~~t~~di~~l~~~l~~~~~ 388 (416)
T PRK00011 353 PFVTSGIRIGTPAITTRGFKEAEMKEIAELIADVLD 388 (416)
T ss_pred CCCCCceEecCHHHhhcCcCHHHHHHHHHHHHHHHh
Confidence 1 24568986533 4578999999999988743
No 125
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.76 E-value=5.9e-17 Score=188.44 Aligned_cols=308 Identities=13% Similarity=0.071 Sum_probs=192.2
Q ss_pred HHHHHHHHHHHHHhhCCCc---cccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHH--HHhcCC-EE
Q 001586 631 QEMFNNLGEWLCTITGFDS---FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT--AAMCGM-KI 704 (1049)
Q Consensus 631 ~~~i~el~~~la~l~G~~~---~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~--a~~~G~-~V 704 (1049)
.+++.+.++.+++++|.+. +.+..++|+.|.++++..+ . + +++..+++ ...|+.+-.. ++..|+ ++
T Consensus 47 ~~~~~~~r~~l~~l~~~~~~~~v~~~~gs~T~~~~~~~~~l---~--~--~~~~~vi~-~g~f~~~~~~~~~~~~g~~~v 118 (378)
T PRK03080 47 KALLKRVIEGTRELLSLPEGYEVGIVPGSDTGAWEMALWSL---L--G--ARRVDHLA-WESFGSKWATDVVKQLKLEDP 118 (378)
T ss_pred HHHHHHHHHHHHHHhCCCCCceEEEECCchHHHHHHHHHhc---C--C--CCcceEEE-eCHHHHHHHHHHHhhcCCCCc
Confidence 3667899999999999843 3345567777776555433 1 1 12444554 3455553332 356799 99
Q ss_pred EEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-ccccccccHHHHHHHHHHcCCEEEEeccccccccCcCCCCccC
Q 001586 705 VSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIG 783 (1049)
Q Consensus 705 v~V~~d~~g~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~Pg~~G 783 (1049)
+.++.++++.+|+++++. ++.|.+++.+ .+|++. |+++|++ |++|++++||+++..+...+. .. .
T Consensus 119 ~~~~~~~g~~~d~~~i~~--------~~~V~~~h~~t~tG~~~-pi~~I~~--~~~g~~~vVDa~qs~G~~pid-v~--~ 184 (378)
T PRK03080 119 RVLEADYGSLPDLSAVDF--------DRDVVFTWNGTTTGVRV-PVARWIG--ADREGLTICDATSAAFALPLD-WS--K 184 (378)
T ss_pred eEeccCCCCCCCHhhcCC--------CCCEEEEecCCccceec-cchhhcc--ccCCCeEEEecccccccCCCC-HH--H
Confidence 999987777888877331 3457777764 599998 7999999 899999999998764443332 11 3
Q ss_pred CcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCC----CCC------CCCCCCCCCCCCccchhhHHHH
Q 001586 784 ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTG----GIP------APEKSQPLGTIAAAPWGSALIL 853 (1049)
Q Consensus 784 aDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~----~~~------~~~~~~~t~~i~sa~~g~~~~~ 853 (1049)
+|++++++||||+ |.||+|++++++++.+.+.....++.. +.. ....+..+.++.+ ...+
T Consensus 185 iD~~~~s~~K~l~-----~P~G~g~l~v~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~tp~-----i~~i 254 (378)
T PRK03080 185 LDVYTFSWQKVLG-----GEGGHGMAILSPRAVERLESYTPARPIPKFFRLTKGGKAIENSFKGQTINTPS-----MLTV 254 (378)
T ss_pred CcEEEEehhhhCC-----CCCceEEEEECHHHHHhhhcccCCCCCchhheeccchHHhhhhhcCCcccCch-----HHHH
Confidence 7999999999995 336899999998766554322221100 000 0001122222221 1112
Q ss_pred HHHHHHHHHHchh-hHHHHHHHHHHHHHHHHHHHhcc--CCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHHHC
Q 001586 854 PISYTYIAMMGSK-GLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDY 930 (1049)
Q Consensus 854 ~~a~a~l~~lG~e-Gl~~~~~~~~~~a~yL~~~L~~~--~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~ 930 (1049)
....+.|+.+-++ |+..+.++...+++++.++|+++ +.+....+.......+.|.++.- ..+.+ .++.++|.++
T Consensus 255 ~~l~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~i~~~~~~~~--~~~~~-~~~~~~l~~~ 331 (378)
T PRK03080 255 EDYLDQLDWANSIGGLDALIARTAANASVLYDWAEKTPWATPLVADPATRSNTSVTLDFVDA--QAAVD-AAAVAKLLRE 331 (378)
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccCccEEEEEcCCc--hHHHH-HHHHHHHHHc
Confidence 2234456666666 78888888999999999999875 33321111111111234444310 00122 3466667777
Q ss_pred CcccCCCCC-CCCCEEEEEccCCCCHHHHHHHHHHHHHHHHHHH
Q 001586 931 GFHGPTMSW-PVPGTLMIEPTESESKEELDRYCDALISIREEIA 973 (1049)
Q Consensus 931 Gi~~~~~~~-p~~~~lri~~t~~~t~eeid~fv~aL~~i~~~i~ 973 (1049)
|+.+..-.+ ...+.+|+++..+++++|||+|+++|++++++.+
T Consensus 332 ~i~v~~g~~~~~~~~vRis~~~~~t~~di~~l~~al~~~~~~~~ 375 (378)
T PRK03080 332 NGAVDIEPYRDAPNGLRIWCGPTVEPADVEALTPWLDWAFERLK 375 (378)
T ss_pred CCeeccccccCCCCcEEEecCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 877642111 1247899999999999999999999999877655
No 126
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.76 E-value=1.3e-16 Score=184.51 Aligned_cols=293 Identities=17% Similarity=0.214 Sum_probs=185.8
Q ss_pred HHHHHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCC-----------CCCCEEEEcCCCCCc-----cHH
Q 001586 632 EMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGD-----------HHRNVCIIPVSAHGT-----NPA 695 (1049)
Q Consensus 632 ~~i~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~-----------~~r~~VLip~saHg~-----~pa 695 (1049)
+.+.++++.+++++|.+.+ +..++++.|...+++++. .+|. .++++||+|.. |-. .+.
T Consensus 45 ~~~~~~~~~~a~~~g~~~~-~~~~g~t~al~~al~al~----~~Gd~~~~~~~~~s~~~~~eVi~~~~-~~~~~~~~~~~ 118 (363)
T TIGR01437 45 ELVNKTGEYIANLLGVEDA-VIVSSASAGIAQSVAAVI----TRGNRYLVENLHDSKIEVNEVVLPKG-HNVDYGAPVET 118 (363)
T ss_pred HHHHHHHHHHHHhhCCCeE-EEEcCHHHHHHHHHHHHh----cCCCcchhhcccccccccceEEEECc-cchhcCCchHH
Confidence 5677899999999998764 566777777766655542 2221 12458888763 322 234
Q ss_pred HHHhcCCEEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEE-EEcC-CccccccccHHHHHHHHHHcCCEEEEeccccccc
Q 001586 696 TAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLM-VTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQ 773 (1049)
Q Consensus 696 ~a~~~G~~Vv~V~~d~~g~iD~~~L~~~i~~~~~~taaV~-it~P-n~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~ 773 (1049)
.+.+.|++++++++ ++.+|+++++++|+ ++|++++ +++| +++|.+. |+++|+++||++|+++++|+++..
T Consensus 119 ~~~~~g~~~v~v~~--~~~~d~~~le~ai~---~~t~ai~~v~~~~~~~g~~~-~~~~i~~~a~~~gi~vivD~a~~~-- 190 (363)
T TIGR01437 119 MVRLGGGKVVEAGY--ANECSAEQLEAAIT---EKTAAILYIKSHHCVQKSML-SVEDAAQVAQEHNLPLIVDAAAEE-- 190 (363)
T ss_pred HHHhcCCeEEEEcC--CCCCCHHHHHHhcC---hhceEEEEEecCCCCcCCcC-CHHHHHHHHHHcCCeEEEECCCCC--
Confidence 56778999999986 46699999999997 7888776 4555 5688776 799999999999999999998641
Q ss_pred cCcCCCCccCCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHH
Q 001586 774 VGLTSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALIL 853 (1049)
Q Consensus 774 ~gl~~Pg~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~ 853 (1049)
.+..+..+|+|++++|+||+| +||.+|+++.++++.+.+.....+. . +..+..+ .+. ..+
T Consensus 191 -~~~~~~~~g~D~~~~S~~K~l------~gp~~G~l~~~~~~i~~~~~~~~~~-~----~~~~~~~-------~~~-~gl 250 (363)
T TIGR01437 191 -DLQKYYRLGADLVIYSGAKAI------EGPTSGLVLGKKKYIEWVKLQSKGI-G----RAMKVGK-------ENI-LGL 250 (363)
T ss_pred -chHHHHHcCCCEEEEeCCccc------CCCceEEEEEcHHHHHHHHhccCCC-c----ceeccCH-------HHH-HHH
Confidence 122334678999999999988 4677889888876554432110000 0 0000000 011 112
Q ss_pred HHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc--CCeeec-cCCCcee--eEEEEeccCccccCCCCHHHHHHHHH
Q 001586 854 PISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPILFR-GVNGTVA--HEFIVDLRGLKNTAGIEPEDVAKRLM 928 (1049)
Q Consensus 854 ~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~--~~v~~~-g~~g~~~--~e~iv~~~~~~~~~g~~~~~v~k~L~ 928 (1049)
..+..++...+.+-+ +...+++.++.++|+++ +.+... +..+... ..+.++.. ..+++..+++++|.
T Consensus 251 ~aAl~~~~~~~~~~~----~~~~~~~~~l~~~L~~i~g~~~~~~~~~~~~~~~~~~v~~~~~----~~g~~~~~l~~~L~ 322 (363)
T TIGR01437 251 TAALEQYLSTGKESG----AEMVAKLTPFIEALNTLKGVSASIVQDEAGRDIARAEIRFDES----ELGMTAADVVQALR 322 (363)
T ss_pred HHHHHHHHccCcccH----HHHHHHHHHHHHHHhcCCCeEEEEecCCCCCcCceEEEEEecc----CCCCCHHHHHHHHh
Confidence 223333333333222 22334567899999876 333211 1111111 12333331 13678999999999
Q ss_pred HCC--cccCCCCCCCCCEEEEEccCCCCHHHHHHHHHHHHHH
Q 001586 929 DYG--FHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISI 968 (1049)
Q Consensus 929 ~~G--i~~~~~~~p~~~~lri~~t~~~t~eeid~fv~aL~~i 968 (1049)
++| |.+.. .+...+.+++.+.. .+++|+|+++++|+++
T Consensus 323 ~~~~~I~~r~-~~~~~~~~~l~~~~-~~~~e~~~~~~~l~~~ 362 (363)
T TIGR01437 323 QGEPAIYTRG-YKANEGIIEIDPRS-VTGGQLDIIVERIREI 362 (363)
T ss_pred cCCCCEEEee-eeecCCeEEEEeec-CCHHHHHHHHHHHHHh
Confidence 877 55432 12235889999885 5599999999999876
No 127
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.76 E-value=1e-16 Score=183.65 Aligned_cols=278 Identities=22% Similarity=0.263 Sum_probs=176.0
Q ss_pred HHHHHHHHHHHHhhCCC----ccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHH---HH-------
Q 001586 632 EMFNNLGEWLCTITGFD----SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA---TA------- 697 (1049)
Q Consensus 632 ~~i~el~~~la~l~G~~----~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa---~a------- 697 (1049)
+++.-.++.+++++|.+ .+++++.||+.++.++++++. +++|+|+.....||-|.. ..
T Consensus 66 ~iE~la~~ra~~lF~~~~~~w~anvqp~SGs~An~av~~aLl--------~pGD~Im~l~l~~GGHlshg~~~~~~~~~~ 137 (399)
T PF00464_consen 66 EIEELAIERAKELFGAEPKEWYANVQPHSGSQANLAVYMALL--------KPGDTIMGLSLPHGGHLSHGSSVNFKKISA 137 (399)
T ss_dssp HHHHHHHHHHHHHHT-STTTEEEE---SSHHHHHHHHHHHHT---------TT-EEEEEEGGGT--GGGT-TTSHSBSSH
T ss_pred HHHHHHHHHHHHHhCCCcccceEEeecCCchHHHHHHHHHHH--------hhcCcEEecChhhccccccccccccccccc
Confidence 44445667889999999 789999999999877777654 267889865666765532 21
Q ss_pred HhcCCEEEEEcCC-CCCCCCHHHHHHHHHhcCCCeEEEEEEcCCccccccccHHHHHHHHHHcCCEEEEecccccccc--
Q 001586 698 AMCGMKIVSVGTD-AKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQV-- 774 (1049)
Q Consensus 698 ~~~G~~Vv~V~~d-~~g~iD~~~L~~~i~~~~~~taaV~it~Pn~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~-- 774 (1049)
....++++.+++| +++.+|.++++++++++++ ++|++...++.-.+ |+++++++|++.|++|++|.+|..+++
T Consensus 138 ~~~~~~~~~y~~d~~~~~ID~d~l~~~a~~~kP--klIi~G~S~y~~~~--d~~~~reIad~vga~l~~D~sH~~GLIa~ 213 (399)
T PF00464_consen 138 SGLYFESVPYPVDPDTGLIDYDELEKLAKEHKP--KLIICGASSYPRPI--DFKRFREIADEVGAYLMADISHIAGLIAG 213 (399)
T ss_dssp HHHHSEEEEEEB-TTTSSB-HHHHHHHHHHH----SEEEEE-SSTSS-----HHHHHHHHHHTT-EEEEE-TTTHHHHHT
T ss_pred ccceEEEEeeeeecCCCeECHHHHHHHHhhcCC--CEEEECchhccCcc--CHHHHHHHHHhcCcEEEecccccccceeh
Confidence 2345789999998 5699999999999997644 45766655543333 699999999999999999999865543
Q ss_pred -CcCCCCccCCcEEEeCCCcccccCCCCCCCceeEEEEcc--------------cccccCCCCccccCCCCCCCCCCCCC
Q 001586 775 -GLTSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKK--------------HLAPFLPSHPVVSTGGIPAPEKSQPL 839 (1049)
Q Consensus 775 -gl~~Pg~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~--------------~l~~~lpg~~vg~t~~~~~~~~~~~t 839 (1049)
.+.+|... +||++++.||+| .||..|+|.+++ ++.+++... -+
T Consensus 214 g~~~~P~~~-ADvvt~sThKtl------~GPrggiI~~~~~~~~~~~~~~~~~~~l~~~I~~a---------------vf 271 (399)
T PF00464_consen 214 GLFPNPFPY-ADVVTGSTHKTL------RGPRGGIILTNKGSKNVDKKGKEIDEELAEKIDSA---------------VF 271 (399)
T ss_dssp TSS--GCCT-SSEEEEESSGGG-------SSS-EEEEES-SEEEE-TTS-EEEHHHHHHHHHH---------------HT
T ss_pred heecCcccc-ceEEEeeccccc------cccCceEEEEcCCccccCCcccccHHHHHHHhccc---------------cC
Confidence 34578765 999999999999 589999999993 222221100 00
Q ss_pred CCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeEEEEeccCccccCCC
Q 001586 840 GTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGI 918 (1049)
Q Consensus 840 ~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~-~~v~~~g~~g~~~~e~iv~~~~~~~~~g~ 918 (1049)
+...+++..+ -+++.|.+.... ....+++.++++++||+.|++.|.+. ++++.. +...|.+++|+++ .++
T Consensus 272 P~~qg~~h~~-~iaalAval~ea-~~~~fk~Ya~qVv~NAk~La~~L~~~G~~v~~g---gTd~H~vlvd~~~----~~~ 342 (399)
T PF00464_consen 272 PGLQGGPHMH-RIAALAVALKEA-LSPEFKEYAKQVVKNAKALAEALQERGFKVVTG---GTDNHQVLVDLRS----FGI 342 (399)
T ss_dssp TTT-SS--HH-HHHHHHHHHHHH-TSHHHHHHHHHHHHHHHHHHHHHHHTT-EEGGG---S-SSSEEEEEGGG----GTS
T ss_pred CCcccCcchh-HHHHHHHHHhcc-cCHHHHHHHHHHHHHHHHHHHHHhhCCcEEEEC---CCCCCeEEEEecc----ccc
Confidence 1111111111 223334444333 34456889999999999999999885 888653 3456778999864 357
Q ss_pred CHHHHHHHHHHCCcccCC--CCC---C-CCCEEEEEccCC
Q 001586 919 EPEDVAKRLMDYGFHGPT--MSW---P-VPGTLMIEPTES 952 (1049)
Q Consensus 919 ~~~~v~k~L~~~Gi~~~~--~~~---p-~~~~lri~~t~~ 952 (1049)
+..++.++|.+.||.+.. +.+ | .+..||+...+.
T Consensus 343 ~g~~a~~~Le~~gI~vnkn~iP~d~~~~~~sGlRlGT~~l 382 (399)
T PF00464_consen 343 DGKEAEKALEEAGIIVNKNTIPGDRSPFVPSGLRLGTPAL 382 (399)
T ss_dssp -HHHHHHHHHHTTEE-EEE--TTTSTTTT-SEEEEESHHH
T ss_pred chHHHHHHHHhcCeeecccccCCCCCCCCCCEEEECCHHH
Confidence 888999999999998752 222 1 347899987653
No 128
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.76 E-value=9.4e-17 Score=183.20 Aligned_cols=295 Identities=17% Similarity=0.156 Sum_probs=193.9
Q ss_pred hcHHHHHHHHHHHHHHhhCCC--c-cccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCEE
Q 001586 628 QGYQEMFNNLGEWLCTITGFD--S-FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKI 704 (1049)
Q Consensus 628 ~G~~~~i~el~~~la~l~G~~--~-~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~V 704 (1049)
+|..++..++++++....|.. . ..+..++|+++..+++.++. .++++|+++...|..+...++..|+++
T Consensus 36 ~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~t~a~~~~~~~~~--------~~g~~vl~~~~~~~~~~~~~~~~~~~~ 107 (350)
T cd00609 36 PGLPELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLLRALL--------NPGDEVLVPDPTYPGYEAAARLAGAEV 107 (350)
T ss_pred CCcHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHhC--------CCCCEEEEcCCCchhHHHHHHHCCCEE
Confidence 466566666666666665531 1 23455666665544433321 246889999999998888899999999
Q ss_pred EEEcCCCCCCCCH--HHHHHHHHhcCCCeEEEEEEcCC-ccccccc--cHHHHHHHHHHcCCEEEEeccccccccCc---
Q 001586 705 VSVGTDAKGNINI--EELRKAAEANRDNLSTLMVTYPS-THGVYEE--GIDEICKIIHDNGGQVYMDGANMNAQVGL--- 776 (1049)
Q Consensus 705 v~V~~d~~g~iD~--~~L~~~i~~~~~~taaV~it~Pn-~~G~i~~--di~eI~~lah~~G~ll~vD~A~~~a~~gl--- 776 (1049)
+.++.++++..+. ++++.+++ +++++|++++|+ .+|.+.+ ++++|.++||++|+++++|+|+.......
T Consensus 108 ~~i~~~~~~~~~~~~~~~~~~~~---~~~~~v~i~~~~~~tG~~~~~~~l~~l~~~~~~~~~~~ivD~a~~~~~~~~~~~ 184 (350)
T cd00609 108 VPVPLDEEGGFLLDLELLEAAKT---PKTKLLYLNNPNNPTGAVLSEEELEELAELAKKHGILIISDEAYAELVYDGEPP 184 (350)
T ss_pred EEEecccccCCccCHHHHHhhcC---ccceEEEEECCCCCCCcccCHHHHHHHHHHHHhCCeEEEEecchhhceeCCccc
Confidence 9999988877665 66666654 789999999985 5898862 35555689999999999999864322111
Q ss_pred ---CCCCccCCcEEEeCCCcccccCCCCCCCceeEEEEcc-cccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHH
Q 001586 777 ---TSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKK-HLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALI 852 (1049)
Q Consensus 777 ---~~Pg~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~-~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~ 852 (1049)
..++..+.|++..++||+|+ .+|+++|++++++ .+.+.+.... ...+.+.+ ...
T Consensus 185 ~~~~~~~~~~~~~~~~s~~K~~~----~~g~~~G~i~~~~~~~~~~~~~~~------------~~~~~~~~------~~~ 242 (350)
T cd00609 185 PALALLDAYERVIVLRSFSKTFG----LPGLRIGYLIAPPEELLERLKKLL------------PYTTSGPS------TLS 242 (350)
T ss_pred ccccCcCccCcEEEEeecccccC----CcccceEEEecCHHHHHHHHHHHH------------HhcccCCC------hHH
Confidence 12345678999999999985 3467899999988 6666543110 00011111 111
Q ss_pred HHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHHHCC
Q 001586 853 LPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYG 931 (1049)
Q Consensus 853 ~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~-~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~G 931 (1049)
..+.+..+.... +++++..++..++++++.+.|++. ..... .+. ....+.+.++. ......+.+.|.++|
T Consensus 243 ~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~--~g~~~~~~~~~-----~~~~~~~~~~l~~~g 313 (350)
T cd00609 243 QAAAAAALDDGE-EHLEELRERYRRRRDALLEALKELGPLVVV-KPS--GGFFLWLDLPE-----GDDEEFLERLLLEAG 313 (350)
T ss_pred HHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHHHhcCCcccc-CCC--ccEEEEEecCC-----CChHHHHHHHHHhCC
Confidence 222333343332 567777888889999999999886 22111 111 12223345431 224566777888889
Q ss_pred cccCCCC-CC--CCCEEEEEccCCCCHHHHHHHHHHHH
Q 001586 932 FHGPTMS-WP--VPGTLMIEPTESESKEELDRYCDALI 966 (1049)
Q Consensus 932 i~~~~~~-~p--~~~~lri~~t~~~t~eeid~fv~aL~ 966 (1049)
|.+.... +. ...++|+++... ++|+++++++|+
T Consensus 314 i~i~~~~~~~~~~~~~iRi~~~~~--~~~i~~~~~al~ 349 (350)
T cd00609 314 VVVRPGSAFGEGGEGFVRLSFATP--EEELEEALERLA 349 (350)
T ss_pred EEEecccccccCCCCeEEEEeeCC--HHHHHHHHHHhh
Confidence 9876432 22 357899999877 999999999886
No 129
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.76 E-value=1.9e-16 Score=183.68 Aligned_cols=288 Identities=14% Similarity=0.167 Sum_probs=181.2
Q ss_pred hhcHHHHHHHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCEEEE
Q 001586 627 AQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVS 706 (1049)
Q Consensus 627 ~~G~~~~i~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~Vv~ 706 (1049)
..|..+.+.++++.+++++|.+.+ +..++|+.++.+. +..+ . ++++.|++....|++.-..+.......+.
T Consensus 51 ~~g~~~~~~~~e~~la~~~~~~~~-l~~~sG~~a~~~~---~~~~---~--~~~d~ii~d~~~H~sv~~~~~~~~~~~~~ 121 (370)
T PRK05937 51 ILGPSSLLDDLEHKIAHFHGAPEA-FIVPSGYMANLGL---CAHL---S--SVTDYVLWDEQVHISVVYSLSVISGWHQS 121 (370)
T ss_pred ccCChHHHHHHHHHHHHHhCCCeE-EEECChHHHHHHH---HHHh---C--CCCCEEEEEhhhhHHHHHHHHHcCCceEE
Confidence 345667788999999999999765 7778887666322 2221 1 14577777788887665555543323333
Q ss_pred EcCCCCCCCCHHHHHHHHHhcC---CCeEEEEEEcCC-ccccccccHHHHHHHHHHcCCEEEEeccccccccCcCCCC--
Q 001586 707 VGTDAKGNINIEELRKAAEANR---DNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPG-- 780 (1049)
Q Consensus 707 V~~d~~g~iD~~~L~~~i~~~~---~~taaV~it~Pn-~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~Pg-- 780 (1049)
++ ..|+++|++++++.. +++.+|++++++ .+|.+. |+++|+++|+++|++++||+++..+..+..--|
T Consensus 122 ~~-----~~d~~~l~~~l~~~~~~~~~~~~v~v~~v~s~~G~i~-pl~eI~~l~~~~~~~livDea~~~G~~g~~g~g~~ 195 (370)
T PRK05937 122 FR-----HNDLDHLESLLESCRQRSFGRIFIFVCSVYSFKGTLA-PLEQIIALSKKYHAHLIVDEAHAMGIFGDDGKGFC 195 (370)
T ss_pred ec-----CCCHHHHHHHHHhhhccCCCcEEEEEecCCCCCCCcc-CHHHHHHHHHHcCCEEEEECCccccccCCCCCchH
Confidence 33 479999999997532 356677788885 589998 799999999999999999999865433321111
Q ss_pred -ccCC---cEEEeCCCcccccCCCCCCCceeEEEEcccccc---cCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHH
Q 001586 781 -YIGA---DVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAP---FLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALIL 853 (1049)
Q Consensus 781 -~~Ga---Di~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~---~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~ 853 (1049)
.++. |+...+++|.| |++|+|+++.++.... ..+.. ..+ .+.. +.+ +
T Consensus 196 ~~~~~~~~~~~~~tlsK~~------g~~G~~vl~~~~~~~~~~~~~~~~-----------~~s---~~~~--~~~----~ 249 (370)
T PRK05937 196 HSLGYENFYAVLVTYSKAL------GSMGAALLSSSEVKQDLMLNSPPL-----------RYS---TGLP--PHL----L 249 (370)
T ss_pred HhhCCCCCcEEEEechhhh------hcCceEEEcCHHHHHHHHHhCCCC-----------eec---CCCC--HHH----H
Confidence 2332 35566778877 3456777765442111 11110 000 1111 111 2
Q ss_pred HHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHHHCCcc
Q 001586 854 PISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFH 933 (1049)
Q Consensus 854 ~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~ 933 (1049)
.+..+.+..+..+| ....++...+.+++.+.|+.. ++ +. ...+. ++ +.+..++.+.|.++||.
T Consensus 250 ~a~~aal~~l~~~~-~~~~~~l~~l~~~l~~~l~~~------~~-~~-~~~i~--~~------~~~~~~~~~~L~~~gi~ 312 (370)
T PRK05937 250 ISIQVAYDFLSQEG-ELARKQLFRLKEYFAQKFSSA------AP-GC-VQPIF--LP------GISEQELYSKLVETGIR 312 (370)
T ss_pred HHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHhcCCC------CC-CC-EEEEE--eC------ChhHHHHHHHHHHCCee
Confidence 22334444444444 233455666777777776532 10 11 11122 22 23467888999999998
Q ss_pred cCCCCCCCCCEEEEEccCCCCHHHHHHHHHHHHHHHHHH
Q 001586 934 GPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEI 972 (1049)
Q Consensus 934 ~~~~~~p~~~~lri~~t~~~t~eeid~fv~aL~~i~~~i 972 (1049)
++...+|..+.+|++++.++|++|||+|+++|.++++++
T Consensus 313 v~~~~~~~~~~iRis~~~~~t~edid~l~~~L~~~~~~~ 351 (370)
T PRK05937 313 VGVVCFPTGPFLRVNLHAFNTEDEVDILVSVLATYLEKY 351 (370)
T ss_pred EEeeCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHh
Confidence 875555666789999999999999999999999987653
No 130
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.76 E-value=3e-16 Score=183.75 Aligned_cols=282 Identities=18% Similarity=0.252 Sum_probs=188.8
Q ss_pred HHHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHh-cCC-CCCCEEE-EcCCCCCccHHHHHhcCC--------
Q 001586 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKA-RGD-HHRNVCI-IPVSAHGTNPATAAMCGM-------- 702 (1049)
Q Consensus 634 i~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~-~G~-~~r~~VL-ip~saHg~~pa~a~~~G~-------- 702 (1049)
..++++.|+++++.+. .++.+||+++++++++++|.|... +|. ++|++|| ...+.||.........+-
T Consensus 84 ~~~l~~~l~~~~~~~~-~~~~~SGseA~e~Alk~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~ 162 (396)
T PRK04073 84 LGPWYEKVAKLTGKDM-VLPMNTGAEAVETAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEEEYKRGFG 162 (396)
T ss_pred HHHHHHHHHhcCCCCe-EEEcCChHHHHHHHHHHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHHhhcCCcccccCCC
Confidence 3478889999988764 467899999999999999887432 232 2345666 567899987655433321
Q ss_pred ----EEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-Ccccccccc---HHHHHHHHHHcCCEEEEecccccccc
Q 001586 703 ----KIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEG---IDEICKIIHDNGGQVYMDGANMNAQV 774 (1049)
Q Consensus 703 ----~Vv~V~~d~~g~iD~~~L~~~i~~~~~~taaV~it~P-n~~G~i~~d---i~eI~~lah~~G~ll~vD~A~~~a~~ 774 (1049)
.++.++. .|+++|+++++ +++++|+++.| |.+|.+.++ +++|.++|+++|+++++|+++.
T Consensus 163 ~~~~~~~~~~~-----~d~~~l~~~i~---~~~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~---- 230 (396)
T PRK04073 163 PMLPGIKKIPY-----GDLEALKAAIT---PNTAAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQT---- 230 (396)
T ss_pred CCCCCceEeCC-----CCHHHHHHhcc---cCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchh----
Confidence 1234444 28899999986 78999999888 568877532 8999999999999999999854
Q ss_pred CcCCCC--------ccCCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccc
Q 001586 775 GLTSPG--------YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAP 846 (1049)
Q Consensus 775 gl~~Pg--------~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~ 846 (1049)
++.+.| ...+|++++ .|.+ ++||..+|++++++++.+.+.... + . .. +
T Consensus 231 g~g~~g~~~~~~~~~~~pdi~~~--sK~l----g~gg~~ig~~~~~~~i~~~~~~~~---------~---~--~t----~ 286 (396)
T PRK04073 231 GLGRTGKLFACDWDNVTPDMYIL--GKAL----GGGVFPISCVAANRDILGVFTPGS---------H---G--ST----F 286 (396)
T ss_pred CCCcCcHHHHhhhcCCCCCEEEe--cccc----cCCCCcceEEEEcHHHHhhhcCCC---------C---C--CC----C
Confidence 333322 124688776 4766 456667899999887766542100 0 0 11 1
Q ss_pred hhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc-CCee--eccCCCceeeEEEEeccCccccCCCCHHHH
Q 001586 847 WGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPIL--FRGVNGTVAHEFIVDLRGLKNTAGIEPEDV 923 (1049)
Q Consensus 847 ~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~-~~v~--~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v 923 (1049)
.+++..++++.+.|..+.++++. ++..++.++|.++|+++ ...+ ..+ .+. + +.+++. .+..++
T Consensus 287 ~~~~~~~aaa~aaL~~~~~~~l~---~~~~~~~~~l~~~L~~l~~~~i~~~~~-~g~-~--~~~~~~-------~~~~~~ 352 (396)
T PRK04073 287 GGNPLACAVSIAALEVLEEEKLP---ERSLELGEYFKEQLKEIDNPMIKEVRG-RGL-F--IGVELN-------EPARPY 352 (396)
T ss_pred CCCHHHHHHHHHHHHHHHhcCHH---HHHHHHHHHHHHHHHhhcCCcccceec-ceE-E--EEEEec-------chHHHH
Confidence 12344455566667666555554 34456688999999875 2211 111 122 1 334432 245789
Q ss_pred HHHHHHCCcccCCCCCCCCCEEEEEccCCCCHHHHHHHHHHHHHHH
Q 001586 924 AKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIR 969 (1049)
Q Consensus 924 ~k~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~eeid~fv~aL~~i~ 969 (1049)
.++|.++|+.+.... .+.+|++|+...|++|+|+++++|++++
T Consensus 353 ~~~l~~~Gv~~~~~~---~~~iRi~p~l~~t~e~i~~~~~~l~~~l 395 (396)
T PRK04073 353 CEALKEEGLLCKETH---ETVIRFAPPLVITKEELDWAFEKIKAVL 395 (396)
T ss_pred HHHHHHCCeEEecCC---CCEEEEECCcccCHHHHHHHHHHHHHHh
Confidence 999999999974321 3789999999999999999999998764
No 131
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.75 E-value=1.3e-16 Score=187.08 Aligned_cols=292 Identities=17% Similarity=0.191 Sum_probs=188.9
Q ss_pred HHHHHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCEEEEEcCCC
Q 001586 632 EMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA 711 (1049)
Q Consensus 632 ~~i~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~Vv~V~~d~ 711 (1049)
+...++++.+++++|.+. .+..++|++++++++.++..+ .+++.|+.....|++....+...|.+++.++.
T Consensus 90 ~~~~~Le~~la~~~g~~~-~l~~~sG~~an~~ai~~l~~~------~~~~~v~~~~~~h~s~~~~~~~~g~~~~~~~~-- 160 (402)
T TIGR01821 90 IPHVELEAELADLHGKES-ALVFTSGYVANDATLATLAKI------IPGCVIFSDELNHASMIEGIRHSGAEKFIFRH-- 160 (402)
T ss_pred HHHHHHHHHHHHHhCCCe-EEEECchHHHHHHHHHHhhCC------CCCCEEEEcchHhHHHHHHHHHcCCeEEEECC--
Confidence 345689999999999765 466788888776665544321 13566666666776665556778888777664
Q ss_pred CCCCCHHHHHHHHHhcCC-CeEEEEEEcCC-ccccccccHHHHHHHHHHcCCEEEEeccccccccC-c-----CCCC-cc
Q 001586 712 KGNINIEELRKAAEANRD-NLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVG-L-----TSPG-YI 782 (1049)
Q Consensus 712 ~g~iD~~~L~~~i~~~~~-~taaV~it~Pn-~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~g-l-----~~Pg-~~ 782 (1049)
.|++++++++++..+ ++++|++++|+ .+|.+. |+++|+++|+++|++++||+++..+..+ . ..++ ..
T Consensus 161 ---~d~~~l~~~l~~~~~~~~~~v~~e~~~~~~G~~~-~l~~i~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~ 236 (402)
T TIGR01821 161 ---NDVAHLEKLLQSVDPNRPKIIAFESVYSMDGDIA-PIEEICDLADKYGALTYLDEVHAVGLYGPRGGGIAERDGLMH 236 (402)
T ss_pred ---CCHHHHHHHHHhccCCCCeEEEEcCCCCCCCCcc-CHHHHHHHHHHcCCEEEEeCcccccccCCCCCccchhccCCC
Confidence 488999999875433 68899999984 689998 7999999999999999999997633211 0 0111 12
Q ss_pred CCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHH
Q 001586 783 GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAM 862 (1049)
Q Consensus 783 GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~ 862 (1049)
.+|++..++.|.|+. +| |+++.++++...+..... .... +. + +++..++++.+.+..
T Consensus 237 ~~div~~t~sKa~g~------~G-G~i~~~~~~~~~l~~~~~---------~~~~-t~--~----~~~~~~aaa~aaL~~ 293 (402)
T TIGR01821 237 RIDIIEGTLAKAFGV------VG-GYIAASRKLIDAIRSYAP---------GFIF-TT--S----LPPAIAAGATASIRH 293 (402)
T ss_pred CCeEEEEechhhhcc------CC-ceeecCHHHHHHHHHhCc---------Ccee-cC--c----CCHHHHHHHHHHHHH
Confidence 368888888998853 33 677777665554321000 0000 01 1 122333344455555
Q ss_pred HchhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHHH-CCcccCCCCCC
Q 001586 863 MGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMD-YGFHGPTMSWP 940 (1049)
Q Consensus 863 lG~eGl~~~~~~~~~~a~yL~~~L~~~-~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~-~Gi~~~~~~~p 940 (1049)
+..+ .+..++..++++++.++|++. +++. ++.++. +.+.+.. .....++.++|.+ +||.+....+|
T Consensus 294 ~~~~--~~~~~~~~~~~~~l~~~L~~~g~~~~--~~~~~i---~~i~~~~-----~~~a~~~~~~L~~~~Gi~v~~~~~p 361 (402)
T TIGR01821 294 LKES--QDLRRAHQENVKRLKNLLEALGIPVI--PNPSHI---VPVIIGD-----AALCKKVSDLLLNKHGIYVQPINYP 361 (402)
T ss_pred hhcC--HHHHHHHHHHHHHHHHHHHHcCCCcC--CCCCCE---EEEEeCC-----HHHHHHHHHHHHhcCCEEEEeECCC
Confidence 5433 333344557889999999875 4432 212322 2222220 1135678888875 69998654444
Q ss_pred -C---CCEEEEEccCCCCHHHHHHHHHHHHHHHHH
Q 001586 941 -V---PGTLMIEPTESESKEELDRYCDALISIREE 971 (1049)
Q Consensus 941 -~---~~~lri~~t~~~t~eeid~fv~aL~~i~~~ 971 (1049)
+ .+.+||+++..+|++|+|+++++|++++++
T Consensus 362 ~~~~g~~~lRis~~~~~t~edi~~~~~~l~~~~~~ 396 (402)
T TIGR01821 362 TVPRGTERLRITPTPAHTDKMIDDLVEALLLVWDR 396 (402)
T ss_pred CCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHH
Confidence 1 258999999999999999999999998765
No 132
>PRK07179 hypothetical protein; Provisional
Probab=99.75 E-value=1.1e-16 Score=188.03 Aligned_cols=269 Identities=17% Similarity=0.185 Sum_probs=183.5
Q ss_pred HHHHHHHHHHHHhCCCCcceEeccchHHHHHHHHHHhhhccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEe---Cc
Q 001586 212 SLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVS---DL 288 (1049)
Q Consensus 212 ~l~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a~~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v---~~ 288 (1049)
...++++.+|+++|.+. +.++++|+.+.++++.++. +++++|+++...|+++...++. .|++++.+ |+
T Consensus 100 ~~~~le~~la~~~g~~~--~~~~~sG~~An~~~l~~l~---~~g~~v~~~~~~h~s~~~~~~~----~g~~~~~~~~~d~ 170 (407)
T PRK07179 100 PKPQFEKKLAAFTGFES--CLLCQSGWAANVGLLQTIA---DPNTPVYIDFFAHMSLWEGVRA----AGAQAHPFRHNDV 170 (407)
T ss_pred HHHHHHHHHHHHhCCCc--EEEECCHHHHHHHHHHHhC---CCCCEEEEECCcCHHHHHHHHH----CCCeEEEecCCCH
Confidence 45566689999999875 5678899987777665543 2679999999999999877643 46666554 45
Q ss_pred chhhc-cCC-CEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCC-----cc----cceEEEecC
Q 001586 289 KDIDY-KSG-DVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPG-----EL----GADIVVGSA 356 (1049)
Q Consensus 289 ~~l~~-l~~-~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~p~-----~~----GaDivvgs~ 356 (1049)
+++++ +++ ++++|++.++ |++|.+.|+++|.++|+++|++++++ +..+++.....+ .+ ++|++++|.
T Consensus 171 ~~l~~~l~~~~~~lV~v~~v~n~tG~i~pl~~I~~l~~~~~~~livD-ea~~~g~~g~~g~g~~~~~~~~~~vdi~~~S~ 249 (407)
T PRK07179 171 DHLRRQIERHGPGIIVVDSVYSTTGTIAPLADIVDIAEEFGCVLVVD-ESHSLGTHGPQGAGLVAELGLTSRVHFITASL 249 (407)
T ss_pred HHHHHHHHhcCCeEEEECCCCCCCCccccHHHHHHHHHHcCCEEEEE-CcccccCcCCCCCchHHhcCCCCCCCEEEeec
Confidence 66666 654 4777888877 68999999999999999999999994 334444332111 22 469999987
Q ss_pred -ccccccCCCCCCceEEEEEchhHHhcCCCceeeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHH
Q 001586 357 -QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYA 435 (1049)
Q Consensus 357 -k~lg~P~~~GGP~~G~l~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irrekaTsni~t~~~l~a~~aa~y~ 435 (1049)
|.|+. ..|++++++++.+.++.. ..+ + ...+|.+ ++.+.++.+++
T Consensus 250 sK~~g~-------~~G~l~~~~~~~~~~~~~---------~~~-~------------~~~~t~~---~~~~aa~~aal-- 295 (407)
T PRK07179 250 AKAFAG-------RAGIITCPRELAEYVPFV---------SYP-A------------IFSSTLL---PHEIAGLEATL-- 295 (407)
T ss_pred hHhhhc-------cCeEEEeCHHHHHHHHHh---------CcC-e------------eeCCCCC---HHHHHHHHHHH--
Confidence 87752 267888888776554200 000 0 0012222 13333333333
Q ss_pred HHhCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEcCCCCcceEEEecCC---HHHHHHHHHHcCCeeeee-------cCC
Q 001586 436 VYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD---AHAIASAAYKIEMNLRVV-------DSN 505 (1049)
Q Consensus 436 ~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~g~~~v~~~~~~~~v~i~~~~---~~~v~~~L~~~gI~~~~~-------~~~ 505 (1049)
.++.. .+++.+++.++.+++++.|+++| +++.+.. ..+.+.++. +..+.+.|.++||.+..+ ..+
T Consensus 296 ~~~~~--~~~~~~~l~~~~~~l~~~L~~~g-~~v~~~~--~i~~l~~~~~~~~~~~~~~L~~~GI~~~~~~~p~~~~~~~ 370 (407)
T PRK07179 296 EVIES--ADDRRARLHANARFLREGLSELG-YNIRSES--QIIALETGSERNTEVLRDALEERNVFGAVFCAPATPKNRN 370 (407)
T ss_pred HHHhc--CHHHHHHHHHHHHHHHHHHHHcC-CCCCCCC--CEEEEEeCCHHHHHHHHHHHHHCCceEeeecCCCCCCCCc
Confidence 33321 24577888999999999999986 7766322 233444432 467888999999974322 136
Q ss_pred eEEEEeccCCCHHHHHHHHHHHhC
Q 001586 506 TVTASFDETTTLEDVDKLFIVFAG 529 (1049)
Q Consensus 506 ~vris~~~~~t~edid~lv~aL~~ 529 (1049)
.+|+|++..+|++|||+++++|..
T Consensus 371 ~lRis~~~~~t~edi~~~~~~l~~ 394 (407)
T PRK07179 371 LIRLSLNADLTASDLDRVLEVCRE 394 (407)
T ss_pred eEEEEECCCCCHHHHHHHHHHHHH
Confidence 899999999999999999999964
No 133
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.75 E-value=1.1e-16 Score=183.63 Aligned_cols=264 Identities=16% Similarity=0.135 Sum_probs=185.3
Q ss_pred HhhhHHHHHHHHHHHHHHHhCCC--CcceEeccchHHHHHHHHHHhhhc-----------cCCCCEEEEcCCCCHHHHHH
Q 001586 205 IAQGRLESLLNFQTMIADLTGLP--MSNASLLDEGTAAAEAMAMCNNIQ-----------KGKKKTFIIASNCHPQTIDI 271 (1049)
Q Consensus 205 ~sqg~le~l~e~q~~ia~L~G~~--~~n~sl~~~~Ta~~eA~~~a~~~~-----------~~~g~~Vlv~~~~Hps~~~~ 271 (1049)
.+.+..+...++.+++++++|.+ .+++.++.|||.+...++.+.+.. .+.+..|+++...|+++...
T Consensus 32 ~~~~~~~le~~~~~~~~~~~g~~~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~h~~~~~~ 111 (345)
T cd06450 32 ESPAATEMEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRARKRLKAGGGRGIDKLVIVCSDQAHVSVEKA 111 (345)
T ss_pred cCchhHHHHHHHHHHHHHHhCCCCCCCCEEEeCChhHHHHHHHHHHHHHhhhhhhcccccccCCeEEEEcCcchhHHHHH
Confidence 34556666777889999999996 457889999997766555443221 01234788999999998887
Q ss_pred HHHhhcCCCeEEEEeCc--------chhhc-cCC------CEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEecc
Q 001586 272 CITRADGFDIKVVVSDL--------KDIDY-KSG------DVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDL 335 (1049)
Q Consensus 272 l~~~a~~~gi~v~~v~~--------~~l~~-l~~------~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~ 335 (1049)
++. .|++++.++. +++++ +.+ ++++|++++| |.+|.+.|+++|+++||++|++++|+. .
T Consensus 112 ~~~----~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~l~vD~-a 186 (345)
T cd06450 112 AAY----LDVKVRLVPVDEDGRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDPLEEIADLAEKYDLWLHVDA-A 186 (345)
T ss_pred HHH----HhcCeEEeeeCCCCCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCCCHHHHHHHHHHhCCeEEEec-h
Confidence 654 3667766653 34554 544 7888888887 689999999999999999999999943 2
Q ss_pred ccccCCC-CC------CcccceEEEecC-ccccccCCCCCCceEEEEEchhHHhcCCCceeeeeecCCCCcceeeecccc
Q 001586 336 LALTILK-PP------GELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTR 407 (1049)
Q Consensus 336 ~alg~l~-~p------~~~GaDivvgs~-k~lg~P~~~GGP~~G~l~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtr 407 (1049)
.+.+.+. .. ...++|+++.++ |+++.|++ .|+++++
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~l~~p~g-----~g~~~~~------------------------------- 230 (345)
T cd06450 187 YGGFLLPFPEPRHLDFGIERVDSISVDPHKYGLVPLG-----CSAVLVR------------------------------- 230 (345)
T ss_pred hhHHHhhChhhHHHhcCccccCEEEEchhHhhCCCcc-----hHHHHHH-------------------------------
Confidence 3333221 11 113799999888 65655543 4444322
Q ss_pred cccccccccCCCccchhHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEcCCCCcceEEEecC----
Q 001586 408 EQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCA---- 483 (1049)
Q Consensus 408 eq~irrekaTsni~t~~~l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~g~~~v~~~~~~~~v~i~~~---- 483 (1049)
..+..++ +.+++.+|++++.++..++++++.+.|+++++++++.++....+.|..+
T Consensus 231 ------------------~~~~~~~--l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~iv~f~~~~~~~ 290 (345)
T cd06450 231 ------------------ALKLWAT--LRRFGRDGYGEHIDRIVDLAKYLAELIRADPGFELLGEPNLSLVCFRLKPSVK 290 (345)
T ss_pred ------------------HHHHHHH--HHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCceeEEEEEECCcch
Confidence 1122223 3677889999999999999999999999985588875444445566543
Q ss_pred -C--HHHHHHHHHHcCCe-eeee---cCCeEEEEeccC-CCHHHHHHHHHHHhC
Q 001586 484 -D--AHAIASAAYKIEMN-LRVV---DSNTVTASFDET-TTLEDVDKLFIVFAG 529 (1049)
Q Consensus 484 -~--~~~v~~~L~~~gI~-~~~~---~~~~vris~~~~-~t~edid~lv~aL~~ 529 (1049)
+ ..++.++|.++|+. +... ..+.+|++++.+ +|++|||+|+++|..
T Consensus 291 ~~~~~~~i~~~L~~~g~~~~~~~~~~~~~~lRis~~~~~~t~~di~~l~~~l~~ 344 (345)
T cd06450 291 LDELNYDLSDRLNERGGWHVPATTLGGPNVLRFVVTNPLTTRDDADALLEDIER 344 (345)
T ss_pred hhHHHHHHHHHHHhcCCEEEEeeEECCeEEEEEEecCCCCCHHHHHHHHHHHHh
Confidence 2 46899999998654 4322 246899999986 599999999999863
No 134
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.75 E-value=2.6e-16 Score=181.29 Aligned_cols=271 Identities=12% Similarity=0.126 Sum_probs=176.3
Q ss_pred HHHHHHHHHHHHHhhCCCccc-cccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHH---HHhcCCEEEE
Q 001586 631 QEMFNNLGEWLCTITGFDSFS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT---AAMCGMKIVS 706 (1049)
Q Consensus 631 ~~~i~el~~~la~l~G~~~~~-l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~---a~~~G~~Vv~ 706 (1049)
.+.+.++++++++++|.+... +..++++++...+++++..... ..++++|+++...|+++... ++..|++++.
T Consensus 41 ~~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~~l~~l~~~~~---~~g~~~vi~~~~~~~s~~~~~~~~~~~G~~v~~ 117 (353)
T TIGR03235 41 KKAVERARKQVAEALGADTEEVIFTSGATESNNLAILGLARAGE---QKGKKHIITSAIEHPAVLEPIRALERNGFTVTY 117 (353)
T ss_pred HHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhcc---cCCCCeeeEcccccHHHHHHHHHHHhcCCEEEE
Confidence 356788999999999997643 4444555566555444432111 11236788888888776554 3457999999
Q ss_pred EcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-ccccccccHHHHHHHHHHcCCEEEEeccccccccCcCCCCccCCc
Q 001586 707 VGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGAD 785 (1049)
Q Consensus 707 V~~d~~g~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~Pg~~GaD 785 (1049)
++.++++.+|+++|+++++ +++++|++++|+ .+|.+. |+++|+++||++|++++||+++..+...+ ...++++|
T Consensus 118 v~~~~~~~~d~~~l~~~l~---~~~~lv~~~~~~n~tG~~~-~~~~I~~l~~~~~~~~ivD~a~~~g~~~~-~~~~~~~D 192 (353)
T TIGR03235 118 LPVDESGRIDVDELADAIR---PDTLLVSIMHVNNETGSIQ-PIREIAEVLEAHEAFFHVDAAQVVGKITV-DLSADRID 192 (353)
T ss_pred EccCCCCcCCHHHHHHhCC---CCCEEEEEEcccCCceecc-CHHHHHHHHHHcCCEEEEEchhhcCCccc-cccccCCC
Confidence 9998889999999999996 688999999985 599998 79999999999999999999875443332 22357899
Q ss_pred EEEeCCCcccccCCCCCCCceeEEEEccccccc--CCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHH
Q 001586 786 VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPF--LPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMM 863 (1049)
Q Consensus 786 i~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~--lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~l 863 (1049)
++++++||++ |.||+|+++++++.... +.....+... .++.+.++.++. .... ..+.+..+
T Consensus 193 ~~~~s~~K~~------gp~g~g~l~~~~~~~~~~~~~~~~~~~~~---~~~~~~gt~~~~-----~~~a---l~~al~~~ 255 (353)
T TIGR03235 193 LISCSGHKIY------GPKGIGALVIRKRGKPKAPLKPIMFGGGQ---ERGLRPGTLPVH-----LIVG---MGEAAEIA 255 (353)
T ss_pred EEEeehhhcC------CCCceEEEEEccCcccccccCceeeCCCC---cCccccCCCChH-----HHHH---HHHHHHHH
Confidence 9999999976 33478999999874322 2111111100 011112222222 1111 22233333
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHHHCCcccC
Q 001586 864 GSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGP 935 (1049)
Q Consensus 864 G~eGl~~~~~~~~~~a~yL~~~L~~~-~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~ 935 (1049)
.+|..+..++..++++++.++|++. +++. ..+.......+.|.++ +.+..++.++|.+ ||.+.
T Consensus 256 -~~~~~~~~~~~~~l~~~l~~~l~~~g~~~~-~~~~~~~~~i~~~~~~------~~~~~~v~~~L~~-~i~v~ 319 (353)
T TIGR03235 256 -RRNAQAWEVKLRAMRNQLRDALQTLGVKLN-GDPAETIPHILNFSID------GVNSEALIVNLRA-DAAVS 319 (353)
T ss_pred -HhhHHHHHHHHHHHHHHHHHHhccCCeEEe-CCcccccCCEEEEEeC------CcCHHHHHHHHhC-CeEEE
Confidence 3577777788889999999999873 3332 1111112222333333 5678899999965 76653
No 135
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.75 E-value=1.9e-16 Score=184.27 Aligned_cols=332 Identities=16% Similarity=0.176 Sum_probs=211.5
Q ss_pred cccccccccccCcccccccc-----ccCcccccCCCCCchhhhhcHHHHHHHHHHHHHHhhCCCc--cc-cccCch-HHH
Q 001586 590 SMIPLGSCTMKLNATTEMMP-----VTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDS--FS-LQPNAG-AAG 660 (1049)
Q Consensus 590 ~~i~lGs~t~~~~~~~~~~~-----~~~~~f~~~~P~~p~e~~~G~~~~i~el~~~la~l~G~~~--~~-l~~~sG-a~g 660 (1049)
.+|.||.|.+.++...+... +..+.+ .|+| .+|..++.+.+.+++.+..|.+. .. +..+.| ++|
T Consensus 29 ~vi~l~iG~Pd~~~p~~i~~a~~~a~~~~~~-~Y~~------~~G~~~LReaia~~~~~~~~~~~~~~~eiivt~Ga~~a 101 (393)
T COG0436 29 DVIDLSIGEPDFPTPEHIIEAAIEALEEGGT-HYTP------SAGIPELREAIAEKYKRRYGLDVDPEEEIIVTAGAKEA 101 (393)
T ss_pred CEEEeCCCCCCCCCCHHHHHHHHHHHhcccC-CCCC------CCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCCHHHH
Confidence 46778888776554444332 122222 3443 36888888888888888888543 22 444444 445
Q ss_pred HHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCEEEEEcCC---CCCCCCHHHHHHHHHhcCCCeEEEEEE
Q 001586 661 EYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTD---AKGNINIEELRKAAEANRDNLSTLMVT 737 (1049)
Q Consensus 661 e~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~Vv~V~~d---~~g~iD~~~L~~~i~~~~~~taaV~it 737 (1049)
.+.+++++. .++|+||+|+.....+.....+.|.+++.++++ .+..+|+++|+++++ ++|++|+++
T Consensus 102 l~~~~~a~~--------~pGDeVlip~P~Y~~y~~~~~~~gg~~v~v~l~~~~~~f~~d~~~l~~~i~---~ktk~i~ln 170 (393)
T COG0436 102 LFLAFLALL--------NPGDEVLIPDPGYPSYEAAVKLAGGKPVPVPLDEEENGFKPDLEDLEAAIT---PKTKAIILN 170 (393)
T ss_pred HHHHHHHhc--------CCCCEEEEeCCCCcCHHHHHHhcCCEEEEEeCCcCccCCcCCHHHHHhhcC---ccceEEEEe
Confidence 543433332 267899999998888888899999999999975 367999999999998 799999999
Q ss_pred cCC-cccccc--ccHHHHHHHHHHcCCEEEEecccc-ccccC--cCCCCccC--Cc--EEEeCCCcccccCCCCCCCcee
Q 001586 738 YPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANM-NAQVG--LTSPGYIG--AD--VCHLNLHKTFCIPHGGGGPGMG 807 (1049)
Q Consensus 738 ~Pn-~~G~i~--~di~eI~~lah~~G~ll~vD~A~~-~a~~g--l~~Pg~~G--aD--i~~~s~hK~f~~P~g~GGPg~G 807 (1049)
+|| .||.+- +.+++|+++|++||++++.|.++. ....+ ..+..+.. .| |.+.|+.|+|+++ |+++|
T Consensus 171 ~P~NPTGav~~~~~l~~i~~~a~~~~i~ii~DEiY~~l~yd~~~~~s~~~~~~~~~~~i~i~s~SK~~~mt----GwRvG 246 (393)
T COG0436 171 SPNNPTGAVYSKEELKAIVELAREHDIIIISDEIYEELVYDGAEHPSILELAGARDRTITINSFSKTYGMT----GWRIG 246 (393)
T ss_pred CCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEehhhhhcccCCCCcCCHhhcCCCcceEEEEeccccccccc----cccee
Confidence 995 699774 369999999999999999999853 12222 11111121 13 5566788988754 89999
Q ss_pred EEEEc-ccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHc-hhhHHHHHHHHHHHHHHHHHH
Q 001586 808 PIGVK-KHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMG-SKGLTEASKIAILNANYMAKR 885 (1049)
Q Consensus 808 ~i~~~-~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG-~eGl~~~~~~~~~~a~yL~~~ 885 (1049)
++++. +.+.+.+- .+ +....+|++...|.+ +.+.|..-. .+.+....+...++.+.+.++
T Consensus 247 ~~v~~~~~l~~~~~--~~------------~~~~~~~~~~~~Q~a----a~~aL~~~~~~~~~~~~~~~~~~rrd~l~~~ 308 (393)
T COG0436 247 WVVGPPEELIAALR--KL------------KSYLTSCAPTPAQYA----AIAALNGPQSDEVVEEMREEYRERRDLLVEA 308 (393)
T ss_pred EeecChHHHHHHHH--HH------------HHhcccCCCHHHHHH----HHHHhcCccchHHHHHHHHHHHHHHHHHHHH
Confidence 99998 55544321 00 011122332223332 222222111 123334445677888999999
Q ss_pred Hhcc--CCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHHH-CCccc-CCCCCCC---CCEEEEEccCCCCHHHH
Q 001586 886 LEKH--YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMD-YGFHG-PTMSWPV---PGTLMIEPTESESKEEL 958 (1049)
Q Consensus 886 L~~~--~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~-~Gi~~-~~~~~p~---~~~lri~~t~~~t~eei 958 (1049)
|+++ +.+.. .+.|.++ ..++++. ..+..+++++|.+ .|+.+ |+..|.. .+++|++.... .+++
T Consensus 309 l~~~~g~~~~~-~p~Ga~Y--~~~~i~~-----~~d~~~f~~~Ll~~~gV~v~PG~~Fg~~~g~~~vRis~~~~--~~~l 378 (393)
T COG0436 309 LNEIGGLSVVK-PPEGAFY--LFPKIPE-----LLDSEEFAKKLLEEAGVAVVPGSGFGEPPGEGYVRLSLATS--EETL 378 (393)
T ss_pred HHhcCCeeecc-CCCeeEE--EEeecCC-----CCCHHHHHHHHHHhCCEEEecccccCCCCCCCeEEEEEecC--HHHH
Confidence 9976 44332 1334332 3345442 2577889988775 58875 5555543 37999998754 4778
Q ss_pred HHHHHHHHHHHHH
Q 001586 959 DRYCDALISIREE 971 (1049)
Q Consensus 959 d~fv~aL~~i~~~ 971 (1049)
+..++.+.+.++.
T Consensus 379 ~~a~~rl~~~~~~ 391 (393)
T COG0436 379 EEALRRLARFLAE 391 (393)
T ss_pred HHHHHHHHHHHHh
Confidence 8888877776543
No 136
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.75 E-value=6e-16 Score=181.18 Aligned_cols=287 Identities=18% Similarity=0.217 Sum_probs=192.1
Q ss_pred HHHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEE-EcCCCCCccHHHHHhcCC----------
Q 001586 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGM---------- 702 (1049)
Q Consensus 634 i~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VL-ip~saHg~~pa~a~~~G~---------- 702 (1049)
..++++.|+++++.+. .++.+||+++++++++++|.|...++..+|++|| ...+.||.........|.
T Consensus 79 ~~~la~~L~~~~~~~~-~~f~~SGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~~ 157 (397)
T TIGR03246 79 VLRLAKKLVDATFADK-VFFCNSGAEANEAALKLARRYALDKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPL 157 (397)
T ss_pred HHHHHHHHHhhCCCCE-EEEeCCcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCcccccCCCCC
Confidence 4578899999987664 4778999999999999999886544323455565 677899987665443332
Q ss_pred --EEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-cccccc---ccHHHHHHHHHHcCCEEEEeccccccccCc
Q 001586 703 --KIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYE---EGIDEICKIIHDNGGQVYMDGANMNAQVGL 776 (1049)
Q Consensus 703 --~Vv~V~~d~~g~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~---~di~eI~~lah~~G~ll~vD~A~~~a~~gl 776 (1049)
.++.++. .|+++|+++++ +++++|+++.++ ..|++. .++++|+++|++||+++++|+++ .|+
T Consensus 158 ~~~~~~~~~-----~d~~~l~~~l~---~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~----tG~ 225 (397)
T TIGR03246 158 PGGIKHAPY-----NDLAAAKALIS---DKTCAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQ----TGV 225 (397)
T ss_pred CCceEEeCC-----CCHHHHHHHhc---cCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechh----hcC
Confidence 2344454 38999999996 789999998654 467653 25999999999999999999985 333
Q ss_pred CCCCcc--------CCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchh
Q 001586 777 TSPGYI--------GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWG 848 (1049)
Q Consensus 777 ~~Pg~~--------GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g 848 (1049)
.+.|.+ .+|++++ .|.+ + ||-.+|.+++++++.+.+.... + +.+ +.|
T Consensus 226 Gr~G~~~a~~~~gv~pDi~t~--~K~l----g-gG~pigav~~~~~i~~~~~~~~---------~------~~t---~~~ 280 (397)
T TIGR03246 226 GRTGELYAYMHYGVTPDILTS--AKAL----G-GGFPIGAMLTTTEIAAHLKVGT---------H------GTT---YGG 280 (397)
T ss_pred CccccchhhhhcCCCCCEEEe--ehhh----h-CCcceeEEEEcHHHHHhccCCC---------c------CCC---CCC
Confidence 333322 3688765 4766 3 4566788888888766542110 0 011 123
Q ss_pred hHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc---CCee--eccCCCceeeEEEEeccCccccCCCCHHHH
Q 001586 849 SALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRGLKNTAGIEPEDV 923 (1049)
Q Consensus 849 ~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~---~~v~--~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v 923 (1049)
++..++++.+.|..+..+.+ .++..++.++|.++|+++ +.+. ..| .|. + +.+.+.+ ........+
T Consensus 281 ~p~~~aaa~a~l~~~~~~~l---~~~~~~~~~~l~~~L~~l~~~~~~~~~vrg-~G~-~--~~i~~~~---~~~~~~~~~ 350 (397)
T TIGR03246 281 NPLACAVAGKVLDLVNTPEL---LAGVKQRHDLFVDGLEKINARYNVFSEIRG-KGL-L--IGAVLTE---AYQGKAKQF 350 (397)
T ss_pred CHHHHHHHHHHHHHHhhccH---HHHHHHHHHHHHHHHHHHHhcCCCeEeeec-Cce-E--EEEEEcC---chhhHHHHH
Confidence 44556666777777654443 455567888999999874 2221 111 121 1 2222210 001235688
Q ss_pred HHHHHHCCcccCCCCCCCCCEEEEEccCCCCHHHHHHHHHHHHHHHHH
Q 001586 924 AKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREE 971 (1049)
Q Consensus 924 ~k~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~eeid~fv~aL~~i~~~ 971 (1049)
.+.|.++|+.+.... .+.+|++|+..+|++|||+++++|.+++.+
T Consensus 351 ~~~l~~~Gv~~~~~g---~~~lR~~p~~~~t~~~i~~~~~~l~~~l~~ 395 (397)
T TIGR03246 351 VNAAAEEGVIALIAG---PNVVRFAPSLVISDDDIDEGLARFERAIEQ 395 (397)
T ss_pred HHHHHHCCeEEeecC---CCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 899999999875332 378999999999999999999999887754
No 137
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.75 E-value=4.6e-17 Score=185.98 Aligned_cols=287 Identities=16% Similarity=0.144 Sum_probs=181.1
Q ss_pred HHHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHH---HHHhcCCEEEEEcCC
Q 001586 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA---TAAMCGMKIVSVGTD 710 (1049)
Q Consensus 634 i~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa---~a~~~G~~Vv~V~~d 710 (1049)
..++++.+++++| +...+..++|++|...+ ++.+. .++++|+++...|..... .+.+.|++++.++.+
T Consensus 34 ~~~l~~~~a~~~g-~~~~~~~~~gt~a~~~~---~~~l~-----~~gd~v~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 104 (338)
T cd06502 34 TAKLEARAAELFG-KEAALFVPSGTAANQLA---LAAHT-----QPGGSVICHETAHIYTDEAGAPEFLSGVKLLPVPGE 104 (338)
T ss_pred HHHHHHHHHHHhC-CCeEEEecCchHHHHHH---HHHhc-----CCCCeEEEecCcceeeecCCcHHHHcCceEEeecCC
Confidence 4578889999999 44445566666665433 33321 256889998888875432 355689999999985
Q ss_pred CCCCCCHHHHHHHHHhc----CCCeEEEEEEcCCccccc-c-ccHHHHHHHHHHcCCEEEEeccccccc---cCc-CCCC
Q 001586 711 AKGNINIEELRKAAEAN----RDNLSTLMVTYPSTHGVY-E-EGIDEICKIIHDNGGQVYMDGANMNAQ---VGL-TSPG 780 (1049)
Q Consensus 711 ~~g~iD~~~L~~~i~~~----~~~taaV~it~Pn~~G~i-~-~di~eI~~lah~~G~ll~vD~A~~~a~---~gl-~~Pg 780 (1049)
. +.+|+++|+++++++ .+++++|++++||..|.+ . .++++|+++|+++|+++++|+|+.... .+. ....
T Consensus 105 ~-~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~g~~~~~~~l~~i~~~~~~~~~~livDea~~~~~~~~~~~~~~~~ 183 (338)
T cd06502 105 N-GKLTPEDLEAAIRPRDDIHFPPPSLVSLENTTEGGTVYPLDELKAISALAKENGLPLHLDGARLANAAAALGVALKTY 183 (338)
T ss_pred C-CcCCHHHHHHHhhccCCCcCCcceEEEEEeecCCccccCHHHHHHHHHHHHHcCCeEeechHHHHHHHHhcCCCHHHH
Confidence 4 789999999999742 137899999999755643 2 268999999999999999999763211 111 0111
Q ss_pred ccCCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHH
Q 001586 781 YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYI 860 (1049)
Q Consensus 781 ~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l 860 (1049)
..++|+++.++||+|+.| |.++++.++++.+.+..... .. .++... ++.. +++.+
T Consensus 184 ~~~~d~~~~s~sK~~~~~------~g~~~~~~~~~~~~~~~~~~-----------~~-~~~~~~----~~~~---~~a~~ 238 (338)
T cd06502 184 KSGVDSVSFCLSKGGGAP------VGAVVVGNRDFIARARRRRK-----------QA-GGGMRQ----SGFL---AAAGL 238 (338)
T ss_pred HhcCCEEEEeccccCCCc------cceEEECCHHHHHHHHHHHH-----------Hh-CCChhh----HHHH---HHHHH
Confidence 247899999999999644 44556666665544321000 00 001010 1111 22233
Q ss_pred HHHchhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHH---HCCcccCC
Q 001586 861 AMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM---DYGFHGPT 936 (1049)
Q Consensus 861 ~~lG~eGl~~~~~~~~~~a~yL~~~L~~~-~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~---~~Gi~~~~ 936 (1049)
..+...++.+..++..++++++.+.|+++ +.+ ++ +..+-+.+..+. ......++.+.|. ++|+.+..
T Consensus 239 ~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~----~~~~~~~v~~~~----~~~~~~~l~~~l~~~~~~gi~~~~ 309 (338)
T cd06502 239 AALENDLWLRRLRHDHEMARRLAEALEELGGLE-SE----VQTNIVLLDPVE----ANAVFVELSKEAIERRGEGVLFYA 309 (338)
T ss_pred HHhcCchHHHHHHHHHHHHHHHHHHHHhcCCCc-cc----ccCCeEEEecCC----ccHHHHHHHHHHHHhhhCCEEEEe
Confidence 34444456667778888899999999875 322 21 122224444321 0111234444443 57887653
Q ss_pred CCCCCCCEEEEEccCCCCHHHHHHHHHHHHH
Q 001586 937 MSWPVPGTLMIEPTESESKEELDRYCDALIS 967 (1049)
Q Consensus 937 ~~~p~~~~lri~~t~~~t~eeid~fv~aL~~ 967 (1049)
.. .+.+|++++..++.+|++++++++++
T Consensus 310 ~~---~~~lRi~~~~~~~~~~i~~~~~~l~~ 337 (338)
T cd06502 310 WG---EGGVRFVTHWDTTEEDVDELLSALKA 337 (338)
T ss_pred cC---CCeEEEEeecCCCHHHHHHHHHHHhc
Confidence 32 27899999999999999999999864
No 138
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=99.75 E-value=1.4e-16 Score=182.63 Aligned_cols=342 Identities=15% Similarity=0.167 Sum_probs=225.0
Q ss_pred ccccccccCccccccccccCcccccCCCCCchhhhhcHHHHHHHHHHHHHHhhC---CCccccccCchHHHHHHHHHHHH
Q 001586 593 PLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITG---FDSFSLQPNAGAAGEYAGLMVIR 669 (1049)
Q Consensus 593 ~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~~G~~~~i~el~~~la~l~G---~~~~~l~~~sGa~ge~a~l~air 669 (1049)
..|++...++.++..+... -.| ++++.- +.+...|+.++|+++++ ++. .|+.+|||.+++.+++.++
T Consensus 57 ~~Gh~~~~i~~Ai~~Q~~~-l~~--~~~~~~------t~~Pa~~LA~~L~~~aP~~~l~~-vFf~~sGSeAvEtAlKma~ 126 (449)
T COG0161 57 NHGHGRPEIAEAIKKQLDK-LPH--VMFGGF------THEPAIELAEKLAELAPEGGLDH-VFFTDSGSEAVETALKMAL 126 (449)
T ss_pred hcCcCCHHHHHHHHHHHHh-CCc--hhhccc------CCchHHHHHHHHHHhCCCCCccE-EEEeCCchHHHHHHHHHHH
Confidence 4688888887777766422 122 222221 01113488999999998 444 4888999999999999999
Q ss_pred HHHHhcCCCCCCEEE-EcCCCCCccHHHHHhcC-------------CEEEEEcCCC------CC--C----CCHHHHHHH
Q 001586 670 AYHKARGDHHRNVCI-IPVSAHGTNPATAAMCG-------------MKIVSVGTDA------KG--N----INIEELRKA 723 (1049)
Q Consensus 670 ~y~~~~G~~~r~~VL-ip~saHg~~pa~a~~~G-------------~~Vv~V~~d~------~g--~----iD~~~L~~~ 723 (1049)
+|++.+|+++|.++| ...++||..-.++...| ..+..++... ++ . -+.++|+++
T Consensus 127 qY~~~~G~p~r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~~~~ll~~~~~~~~P~~y~~~~~~~~~~~~~~~a~~le~~ 206 (449)
T COG0161 127 QYWRARGQPQRKKFISRRNGYHGDTLGAMSVGGPVALRHAFYDPLLPEVLHLPAPYAYRRGFFGEGDEEFAEAADELEAL 206 (449)
T ss_pred HHHHhcCCCcceEEEEeccCcCcccchheeccCchhhhhhhccccccCceecCCCcccccCCCCCChHHHHHHHHHHHHH
Confidence 999999987777777 57889997655533322 1233444321 11 1 337889999
Q ss_pred HHhcC-CCeEEEEEEcC-Cc-cccccc---cHHHHHHHHHHcCCEEEEeccccccccCcCCCCcc--------CCcEEEe
Q 001586 724 AEANR-DNLSTLMVTYP-ST-HGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI--------GADVCHL 789 (1049)
Q Consensus 724 i~~~~-~~taaV~it~P-n~-~G~i~~---di~eI~~lah~~G~ll~vD~A~~~a~~gl~~Pg~~--------GaDi~~~ 789 (1049)
|.++. +++++++++.- .. .|++.+ .++++.++|++||+++|+|++ ..||.+.|.+ -+|++++
T Consensus 207 i~~~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~ILlI~DEV----~tGFGRTG~~FA~e~~gi~PDi~~~ 282 (449)
T COG0161 207 ILEHGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGILLIADEV----ATGFGRTGKMFACEHAGIVPDILCL 282 (449)
T ss_pred HHhcCcccEEEEEecccccccCCcccCChHHHHHHHHHHHHcCcEEEeecc----eeCCCcCchhhhhhhcCCCCCeeee
Confidence 99888 67777766644 33 677753 489999999999999999986 6788888754 4699887
Q ss_pred CCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHH
Q 001586 790 NLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLT 869 (1049)
Q Consensus 790 s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~ 869 (1049)
.|.++ +|--.+|.+.+++++.+.+-....+. +.|+. ++.|+++.|++|.+.|..+-++++.
T Consensus 283 --aKGLT----~GY~Pl~a~l~~~~I~~~~~~~~~~~----f~HG~---------TYsghPlacAaAla~L~i~e~e~l~ 343 (449)
T COG0161 283 --AKGLT----GGYLPLSAVLTSDRIYEAFSDGDAGA----FMHGH---------TYSGNPLACAAALANLDILEEEDLL 343 (449)
T ss_pred --ccccc----ccchhhHhHhhhHHHHHHHhcccCCe----eccCC---------ccccCHHHHHHHHHHHHHHHhcCHH
Confidence 48774 33334455556666554332111110 12222 1336788899999999999888877
Q ss_pred HHHHHHHHHHHHHHHHHhc-cC--CeeeccC-CCce-eeEEEEeccCccccCCCCHHHHHHHHHHCCcccCCCCCCCCCE
Q 001586 870 EASKIAILNANYMAKRLEK-HY--PILFRGV-NGTV-AHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGT 944 (1049)
Q Consensus 870 ~~~~~~~~~a~yL~~~L~~-~~--~v~~~g~-~g~~-~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~p~~~~ 944 (1049)
+.++ +...||.++|++ .. +.+-.-+ .|.. ..|++-|..+...-...-...+.+.+.++|+.++.+ ++.
T Consensus 344 ~~~~---~~~~~l~~~L~~~l~~~p~VgdVR~~Gli~~iElv~d~~t~~~f~~~~~~~~~~~~~e~Gl~iRp~----g~~ 416 (449)
T COG0161 344 ERVA---EIGAYLQAGLQAALADHPLVGDVRGLGLIGAIELVADKATKTPFEARVGARVRAAALERGLLIRPL----GDV 416 (449)
T ss_pred HHHH---HHHHHHHHHHHHhcccCCcEEEeeccceEEEEEEecccccccchhhhHHHHHHHHHHHCCeEEeec----CCE
Confidence 5544 678899999987 22 1211000 1221 223333321100000011457888888999998744 579
Q ss_pred EEEEccCCCCHHHHHHHHHHHHHHHHHHHH
Q 001586 945 LMIEPTESESKEELDRYCDALISIREEIAQ 974 (1049)
Q Consensus 945 lri~~t~~~t~eeid~fv~aL~~i~~~i~~ 974 (1049)
+.++|....|++|||++++++++.+++...
T Consensus 417 i~~~PPliit~~eid~l~~~l~~al~~~~~ 446 (449)
T COG0161 417 IYLMPPLIITREEIDELVDALREALDETLA 446 (449)
T ss_pred EEEcCCccCCHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999887543
No 139
>PLN02721 threonine aldolase
Probab=99.74 E-value=2.2e-16 Score=181.40 Aligned_cols=292 Identities=14% Similarity=0.131 Sum_probs=185.0
Q ss_pred HHHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHH---HHHhcCCEEEEEcCC
Q 001586 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA---TAAMCGMKIVSVGTD 710 (1049)
Q Consensus 634 i~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa---~a~~~G~~Vv~V~~d 710 (1049)
..++++.+++++|.+.. +..++|+++...++.+.. . .++++|++++.+|..... .+...|++++.++.+
T Consensus 42 ~~~l~~~la~~~~~~~~-~~~~~Gs~a~~~~l~~~~----~---~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 113 (353)
T PLN02721 42 ALRLEEEMAKIFGKEAA-LFVPSGTMGNLISVLVHC----D---VRGSEVILGDNSHIHLYENGGISTLGGVHPRTVKNN 113 (353)
T ss_pred HHHHHHHHHHHhCCcee-EEecCccHHHHHHHHHHc----c---CCCCeEEEcCccceehhcccchhhhcCceeEecCCC
Confidence 45788999999998764 445566665543433321 1 156889999888744333 467789999999988
Q ss_pred CCCCCCHHHHHHHHHhcC----CCeEEEEEEcC-C-cccccc--ccHHHHHHHHHHcCCEEEEeccccccc---cCcCCC
Q 001586 711 AKGNINIEELRKAAEANR----DNLSTLMVTYP-S-THGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQ---VGLTSP 779 (1049)
Q Consensus 711 ~~g~iD~~~L~~~i~~~~----~~taaV~it~P-n-~~G~i~--~di~eI~~lah~~G~ll~vD~A~~~a~---~gl~~P 779 (1049)
+++.+|+++|+++++++. +++++|+++++ | .+|.+. +++++|+++|+++|+++++|+++.... .+. .+
T Consensus 114 ~~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~~~~np~G~~~~~~~l~~l~~l~~~~g~~livD~a~~~~~~~~~~~-~~ 192 (353)
T PLN02721 114 EDGTMDLDAIEAAIRPKGDDHFPTTRLICLENTHANCGGRCLSVEYTDKVGELAKRHGLKLHIDGARIFNASVALGV-PV 192 (353)
T ss_pred cCCCcCHHHHHHHHHhccCCCCCcceEEEEeccccccCCccccHHHHHHHHHHHHHcCCEEEEEchhhhcchhhhCC-CH
Confidence 889999999999997421 47889999775 4 467664 248999999999999999999863211 111 22
Q ss_pred C--ccCCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHH
Q 001586 780 G--YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISY 857 (1049)
Q Consensus 780 g--~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~ 857 (1049)
. ..++|.++.++||+|+ +|.+++++.++++...+.. .. ....+... +.+. .+..++
T Consensus 193 ~~~~~~~d~~~~s~sK~l~------~~~G~~~~~~~~~~~~~~~--~~----------~~~~~~~~--~~~~--~~~~~~ 250 (353)
T PLN02721 193 HRLVKAADSVSVCLSKGLG------APVGSVIVGSKSFIRKAKR--LR----------KTLGGGMR--QVGV--LAAAAL 250 (353)
T ss_pred HHHhhhCCEEEEecccccC------CceeeEEecCHHHHHhHHH--HH----------HhcCCCee--hhHH--HHHHHH
Confidence 2 2378999999999984 4433455556655443210 00 00000111 1111 111122
Q ss_pred HHHHHHchhhHHHHHHHHHHHHHHHHHHHhccCCe--eeccCCCceeeEEEEeccCccccCCCCHHHHHHHHHHCCcccC
Q 001586 858 TYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPI--LFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGP 935 (1049)
Q Consensus 858 a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~~~v--~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~ 935 (1049)
..+.. ..+..++..++++++.+.|+++..+ .... +..+.+.++++. ..+.+...++++|.++||.+.
T Consensus 251 ~~l~~-----~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~---~~~~~~~~~~~~---~~~~~~~~~~~~L~~~gi~v~ 319 (353)
T PLN02721 251 VALQE-----NVPKLEDDHKKAKLLAEGLNQIKGLRVNVAA---VETNIVYFDITD---GSRITAEKLCKSLEEHGVLLM 319 (353)
T ss_pred HHHHH-----HHHHHHHHHHHHHHHHHHHHhCCCcEEecCC---ccceEEEEEccC---CccccHHHHHHHHHhCCcEEe
Confidence 22211 1122333456778999999875222 1212 122224455541 011357889999999999986
Q ss_pred CCCCCCCCEEEEEccCCCCHHHHHHHHHHHHHHHH
Q 001586 936 TMSWPVPGTLMIEPTESESKEELDRYCDALISIRE 970 (1049)
Q Consensus 936 ~~~~p~~~~lri~~t~~~t~eeid~fv~aL~~i~~ 970 (1049)
... .+++|++++...+++|+++++++|++++.
T Consensus 320 ~~~---~~~lR~~~~~~~~~~~i~~~~~~l~~~~~ 351 (353)
T PLN02721 320 PGN---SSRIRVVTHHQISDSDVQYTLSCFQQAAL 351 (353)
T ss_pred cCC---CceEEEEecCcCCHHHHHHHHHHHHHHhh
Confidence 433 47899999988999999999999988753
No 140
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.74 E-value=2e-16 Score=185.67 Aligned_cols=311 Identities=14% Similarity=0.152 Sum_probs=195.0
Q ss_pred cccccCCCCCCCCCcHHHHHHHHhCCccccccCCChhhHhhhHHHHHHHHHHHHHHHhCCCCcceEeccchHHHHHHHHH
Q 001586 167 YKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAM 246 (1049)
Q Consensus 167 ~~~~lG~g~y~~~~p~~i~~~~~~~~~~~t~ytpyq~e~sqg~le~l~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~ 246 (1049)
.++|+|.+.+|..+-+... .+ ++.+ + ++-.+....|..+...++++.+|+++|.+. +.++.+|+.+.++++.
T Consensus 52 sn~ylgl~~~p~v~~a~~~-~~-~~~~--~--~~~~s~~~~g~~~~~~~Le~~la~~~g~~~--~l~~~sG~~an~~ai~ 123 (402)
T TIGR01821 52 SNDYLGMGQHPEVLQAMHE-TL-DKYG--A--GAGGTRNISGTNIPHVELEAELADLHGKES--ALVFTSGYVANDATLA 123 (402)
T ss_pred ccCcCCCCCCHHHHHHHHH-HH-HHcC--C--CCcchhhhhCCcHHHHHHHHHHHHHhCCCe--EEEECchHHHHHHHHH
Confidence 4567777765433333332 22 2211 1 111233444556667788999999999753 6677888877776654
Q ss_pred HhhhccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeC---cchhhc-c---C-CCEeEEEEEcC-CCCeeeccHHH
Q 001586 247 CNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSD---LKDIDY-K---S-GDVCGVLVQYP-GTEGEVLDYGD 317 (1049)
Q Consensus 247 a~~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~---~~~l~~-l---~-~~t~~V~v~~p-n~~G~i~di~~ 317 (1049)
++.. ..+++.|+.+...|+++...++. .|+++..++ .+++++ + + +++++|++.+| |++|.+.|+++
T Consensus 124 ~l~~-~~~~~~v~~~~~~h~s~~~~~~~----~g~~~~~~~~~d~~~l~~~l~~~~~~~~~~v~~e~~~~~~G~~~~l~~ 198 (402)
T TIGR01821 124 TLAK-IIPGCVIFSDELNHASMIEGIRH----SGAEKFIFRHNDVAHLEKLLQSVDPNRPKIIAFESVYSMDGDIAPIEE 198 (402)
T ss_pred HhhC-CCCCCEEEEcchHhHHHHHHHHH----cCCeEEEECCCCHHHHHHHHHhccCCCCeEEEEcCCCCCCCCccCHHH
Confidence 4321 12567777777899999888753 366655443 345554 3 2 36788888887 78999999999
Q ss_pred HHHHHHhCCcEEEEEeccccccCCCCCC---------cccceEEEecC-ccccccCCCCCCceEEEEEchhHHhcCCCce
Q 001586 318 FIKNAHANGVKVVMATDLLALTILKPPG---------ELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRI 387 (1049)
Q Consensus 318 I~~~ah~~galliV~a~~~alg~l~~p~---------~~GaDivvgs~-k~lg~P~~~GGP~~G~l~~~~~l~~~lpgri 387 (1049)
|.++|+++|++++|+ +.+++|.+.+.+ ....||++++. |.||.+ | |++++++++.+.+...
T Consensus 199 i~~l~~~~~~~livD-ea~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~~---G----G~i~~~~~~~~~l~~~- 269 (402)
T TIGR01821 199 ICDLADKYGALTYLD-EVHAVGLYGPRGGGIAERDGLMHRIDIIEGTLAKAFGVV---G----GYIAASRKLIDAIRSY- 269 (402)
T ss_pred HHHHHHHcCCEEEEe-CcccccccCCCCCccchhccCCCCCeEEEEechhhhccC---C----ceeecCHHHHHHHHHh-
Confidence 999999999999994 344544432211 12368988886 888642 2 5777787776554100
Q ss_pred eeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHhhcCCCe
Q 001586 388 VGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTV 467 (1049)
Q Consensus 388 vG~s~d~~g~~~~~l~lqtreq~irrekaTsni~t~~~l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~g~~ 467 (1049)
.+.|.++ .+.| +....+..+++ .++..+ +++.++..++.+++++.|+++| +
T Consensus 270 ---------~~~~~~t------------~~~~---~~~~aaa~aaL--~~~~~~--~~~~~~~~~~~~~l~~~L~~~g-~ 320 (402)
T TIGR01821 270 ---------APGFIFT------------TSLP---PAIAAGATASI--RHLKES--QDLRRAHQENVKRLKNLLEALG-I 320 (402)
T ss_pred ---------CcCceec------------CcCC---HHHHHHHHHHH--HHhhcC--HHHHHHHHHHHHHHHHHHHHcC-C
Confidence 0001110 0011 11222333343 333222 4566677789999999999887 7
Q ss_pred EEcCCCCcceEEEecCC---HHHHHHHHHH-cCCeeeee-------cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001586 468 EVQGLPFFDTVKVKCAD---AHAIASAAYK-IEMNLRVV-------DSNTVTASFDETTTLEDVDKLFIVFAG 529 (1049)
Q Consensus 468 ~v~~~~~~~~v~i~~~~---~~~v~~~L~~-~gI~~~~~-------~~~~vris~~~~~t~edid~lv~aL~~ 529 (1049)
+++... ...+.+.++. +.++.++|.+ +||.++.. ..+.+|++++.++|++|||+++++|..
T Consensus 321 ~~~~~~-~~i~~i~~~~~~~a~~~~~~L~~~~Gi~v~~~~~p~~~~g~~~lRis~~~~~t~edi~~~~~~l~~ 392 (402)
T TIGR01821 321 PVIPNP-SHIVPVIIGDAALCKKVSDLLLNKHGIYVQPINYPTVPRGTERLRITPTPAHTDKMIDDLVEALLL 392 (402)
T ss_pred CcCCCC-CCEEEEEeCCHHHHHHHHHHHHhcCCEEEEeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence 765321 1223343432 5688888865 59988653 125799999999999999999999964
No 141
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.74 E-value=2.8e-16 Score=183.41 Aligned_cols=309 Identities=13% Similarity=0.133 Sum_probs=199.1
Q ss_pred CCccccccCCCCCCCCCcHHHHHHHHhCCccccccCCChhhHhhhHHHHHHHHHHHHHHHhCCCCcceEeccchHHHHHH
Q 001586 164 NKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEA 243 (1049)
Q Consensus 164 n~~~~~~lG~g~y~~~~p~~i~~~~~~~~~~~t~ytpyq~e~sqg~le~l~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA 243 (1049)
|...++|+|...+|+..-+++. .+.+ |.+.+ ..++..-|+...+.++|+.+|+++|.+. +.++.+|+++.-+
T Consensus 2 ~f~s~dyLgl~~~~~~~~~~~~-a~~~---~g~~~--~~sr~~yg~~~~~~~LE~~lA~~~g~e~--al~~~sG~~a~~~ 73 (392)
T PLN03227 2 NFATHDFLSTSSSPTLRQTALE-SLSH---YGCGS--CGPRGFYGTIDAHLELEQCMAEFLGTES--AILYSDGASTTSS 73 (392)
T ss_pred CCcCcCccCCCCCHHHHHHHHH-HHHH---hCCCC--cccccccCChHHHHHHHHHHHHHhCCCc--EEEecCcHHHHHH
Confidence 3345789999987765555553 3332 33332 2444446677788899999999999874 5677777766666
Q ss_pred HHHHhhhccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeC---cchhhc----cC-----------CCEeEEEEEc
Q 001586 244 MAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSD---LKDIDY----KS-----------GDVCGVLVQY 305 (1049)
Q Consensus 244 ~~~a~~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~---~~~l~~----l~-----------~~t~~V~v~~ 305 (1049)
+++++ . ++||+||+++..|+++...++. . +.++++++ .++++. +. ++++.|++..
T Consensus 74 ~i~~l-~--~~GD~Vl~~~~~h~s~~~~~~l-~---~~~~~~~~~~d~~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~ 146 (392)
T PLN03227 74 TVAAF-A--KRGDLLVVDRGVNEALLVGVSL-S---RANVRWFRHNDMKDLRRVLEQVRAQDVALKRKPTDQRRFLVVEG 146 (392)
T ss_pred HHHHh-C--CCCCEEEEeccccHHHHHHHHH-c---CCeEEEeCCCCHHHHHHHHHHhhhhccccccccCCCcEEEEEcC
Confidence 66664 2 3899999999999999888732 2 34555443 333332 21 3578888887
Q ss_pred C-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCC-----------CcccceEEEecC-ccccccCCCCCCceEE
Q 001586 306 P-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPP-----------GELGADIVVGSA-QRFGVPMGYGGPHAAF 372 (1049)
Q Consensus 306 p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~p-----------~~~GaDivvgs~-k~lg~P~~~GGP~~G~ 372 (1049)
+ |+.|.+.|+++|.++||++|++++++ +.++++.+.+. ...|+||+++|. |.++ |.+|+
T Consensus 147 v~~~~G~i~~l~~i~~l~~~~g~~livD-e~~~~g~~g~~G~g~~~~~g~~p~~~~Div~~slsk~~g-------~~gg~ 218 (392)
T PLN03227 147 LYKNTGTLAPLKELVALKEEFHYRLILD-ESFSFGTLGKSGRGSLEHAGLKPMVHAEIVTFSLENAFG-------SVGGM 218 (392)
T ss_pred CcCCCCcccCHHHHHHHHHHcCCEEEEE-CcccccccCCCCCcHHHHcCCCCCCCceEEEeechhhhh-------ccCcE
Confidence 6 78999999999999999999999994 55565544321 134789999995 5443 44567
Q ss_pred EEEchhHHhcCCCceeeeeecCCCCcceeeecccccccccccccCCCc-cch-hHH--HHHHHHHHHHHhCcchHHHHHH
Q 001586 373 LATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNI-CTA-QAL--LANMAAMYAVYHGPEGLKTIAQ 448 (1049)
Q Consensus 373 l~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irrekaTsni-~t~-~~l--~a~~aa~y~~~~g~~Gl~~ia~ 448 (1049)
+.+++++.+.+.. . +..++ .++ ++. ++..+++ ..+. + .+++.+
T Consensus 219 v~~~~~~~~~~~~--~---------------------------~~~~~~~~~~~p~~~~aa~~al--~~~~-~-~~~~~~ 265 (392)
T PLN03227 219 TVGSEEVVDHQRL--S---------------------------GSGYCFSASAPPFLAKADATAT--AGEL-A-GPQLLN 265 (392)
T ss_pred EecCHHHHHHHHH--h---------------------------CcCccccCCCCHHHHHHHHHHH--HHHh-c-CHHHHH
Confidence 7778776543310 0 00011 111 121 1222222 1111 1 245677
Q ss_pred HHHHHHHHHHHHhhcCCCeEEc----------CCCCcceEEEecCC------------HHHHHHHHHHcCCeeee-----
Q 001586 449 RVHGLAGTFALGLKKLGTVEVQ----------GLPFFDTVKVKCAD------------AHAIASAAYKIEMNLRV----- 501 (1049)
Q Consensus 449 ~~~~~a~~l~~~L~~~g~~~v~----------~~~~~~~v~i~~~~------------~~~v~~~L~~~gI~~~~----- 501 (1049)
+..+++++|++.|++.+ +..+ .......+.|.+.+ ..++.++|.++||.+..
T Consensus 266 ~l~~~~~~l~~~L~~~~-~~~~~~~rg~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~~~~~~~~ 344 (392)
T PLN03227 266 RLHDSIANLYSTLTNSS-HPYALKLRNRLVITSDPISPIIYLRLSDQEATRRTDETLILDQIAHHSLSEGVAVVSTGGHV 344 (392)
T ss_pred HHHHHHHHHHHHHHhcC-CccccccccccccCCCCCCCEEEEEeCCHHHhhhhhhhhHHHHHHHHHHHCCCEEEeccccc
Confidence 88999999999998643 3211 11111223444332 14788899999997742
Q ss_pred ------ecCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001586 502 ------VDSNTVTASFDETTTLEDVDKLFIVFAG 529 (1049)
Q Consensus 502 ------~~~~~vris~~~~~t~edid~lv~aL~~ 529 (1049)
.++..+|++++..+|+||||+++++|..
T Consensus 345 ~~~~~~~P~~~iR~~~~~~~t~eei~~~~~~l~~ 378 (392)
T PLN03227 345 KKFLQLVPPPCLRVVANASHTREDIDKLLTVLGE 378 (392)
T ss_pred CCcCCCCCCceEEEEecCCCCHHHHHHHHHHHHH
Confidence 2357899999999999999999999974
No 142
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.74 E-value=4.5e-17 Score=187.21 Aligned_cols=267 Identities=19% Similarity=0.223 Sum_probs=181.0
Q ss_pred HHHHHHHHHHHHHhCCCCcceEeccchHHHHHHHHHHhhhccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCcc-
Q 001586 211 ESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK- 289 (1049)
Q Consensus 211 e~l~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a~~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~~~- 289 (1049)
..+.|+|+.+|+++|++.+.+ +++|+|.+..++++|+. . +||+|||++++|.|+...+.. .|+++++++++
T Consensus 66 G~I~eAe~~aA~~fGAd~t~f-lvnGsT~g~~a~i~a~~-~--~gd~VLv~RN~HkSv~~alil----~ga~Pvyi~p~~ 137 (417)
T PF01276_consen 66 GIIKEAEELAARAFGADKTFF-LVNGSTSGNQAMIMALC-R--PGDKVLVDRNCHKSVYNALIL----SGAIPVYIPPED 137 (417)
T ss_dssp THHHHHHHHHHHHHTESEEEE-ESSHHHHHHHHHHHHHT-T--TTCEEEEETT--HHHHHHHHH----HTEEEEEEEEEE
T ss_pred cHHHHHHHHHHHhcCCCeEEE-EecCchHHHHHHHHHhc-C--CCCEEEEcCCcHHHHHHHHHH----cCCeEEEecCCc
Confidence 368899999999999998655 77899999999998864 3 899999999999999998753 38888887652
Q ss_pred -----------------hhhc-c--CCCEeE---EEEEcCCCCeeeccHHHHHHHHHhCCcEEEEE----eccccccCCC
Q 001586 290 -----------------DIDY-K--SGDVCG---VLVQYPGTEGEVLDYGDFIKNAHANGVKVVMA----TDLLALTILK 342 (1049)
Q Consensus 290 -----------------~l~~-l--~~~t~~---V~v~~pn~~G~i~di~~I~~~ah~~galliV~----a~~~alg~l~ 342 (1049)
++++ + .++.++ |++++|||+|.+.|+++|+++||++|..++|+ +++....+..
T Consensus 138 ~~~gi~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PTY~Gv~~di~~I~~~~h~~~~~llvDEAhGah~~F~~lp~ 217 (417)
T PF01276_consen 138 NEYGIIGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSPTYYGVCYDIKEIAEICHKHGIPLLVDEAHGAHFGFHPLPR 217 (417)
T ss_dssp -TTS-BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS-TTSEEE-HHHHHHHHCCTECEEEEE-TT-TTGGCSGGGT
T ss_pred cccCCccCCChhhhhHHHHHHHHHhCccccCceEEEEeCCCCCeEEECHHHHHHHhcccCCEEEEEccccccccCCCCcc
Confidence 2322 2 345555 99999999999999999999999999999993 3322223334
Q ss_pred CCCcccce-------EEEecC-ccccccCCCCCCceEEEEEchhHHhcCCCceeeeeecCCCCcceeeeccccccccccc
Q 001586 343 PPGELGAD-------IVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRD 414 (1049)
Q Consensus 343 ~p~~~GaD-------ivvgs~-k~lg~P~~~GGP~~G~l~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irre 414 (1049)
+.-.+||| +++.|. |.++. +. +++++.++.+.. + | +.|..
T Consensus 218 ~a~~~gad~~~~~~~~vvqS~HKtL~a-lt----Qts~lh~~~~~~--v---------~----------------~~~~~ 265 (417)
T PF01276_consen 218 SALALGADRPNDPGIIVVQSTHKTLPA-LT----QTSMLHVKGDRI--V---------D----------------HERVN 265 (417)
T ss_dssp TCSSTTSS-CTSBEEEEEEEHHHHSSS--T----T-EEEEEETCCC--T---------T----------------HHHHH
T ss_pred chhhccCccccccceeeeechhhcccc-cc----cceEEEecCCCc--c---------c----------------HHHHH
Confidence 45679999 999999 66653 22 578888875430 0 0 00111
Q ss_pred ccCCCccchhHHHHHHHHHH--HHHh-CcchHHHHHHHHHHHHHHHHHHh---hcCCCeEEcCC------C---------
Q 001586 415 KATSNICTAQALLANMAAMY--AVYH-GPEGLKTIAQRVHGLAGTFALGL---KKLGTVEVQGL------P--------- 473 (1049)
Q Consensus 415 kaTsni~t~~~l~a~~aa~y--~~~~-g~~Gl~~ia~~~~~~a~~l~~~L---~~~g~~~v~~~------~--------- 473 (1049)
.+-+-.-|+++.|.++|++- ..++ +.+| +++.++..+++..++++| +++.+++++++ .
T Consensus 266 ~~l~~~~TTSPSY~lmASlD~a~~~m~~~~G-~~l~~~~i~~a~~~R~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 344 (417)
T PF01276_consen 266 EALSMHQTTSPSYPLMASLDVARAQMEEEEG-RELLEEAIELAEEFRKKINRLNDIWGFKVLGPEDVGGEGCWDLDPGEN 344 (417)
T ss_dssp HHHHHHS-SS--HHHHHHHHHHHHHHSHHHH-HHHHHHHHHHHHHHHHHHHHHCCT-SSEESS-SEECTCCGCB--TT-T
T ss_pred HHHHHHcCCChHHHHHHHHHHHHHHHhhhhh-HHHHHHHHHHHHHHHHHHHhcCCCceEecCCccccCCccccccCcccc
Confidence 11122335688889999983 2344 3444 567788888999999999 55644777642 1
Q ss_pred ------------Ccce--EEEecC-----------C--HHHHHHHHHHcCCeeeeecCCeEEEEeccCCCHH
Q 001586 474 ------------FFDT--VKVKCA-----------D--AHAIASAAYKIEMNLRVVDSNTVTASFDETTTLE 518 (1049)
Q Consensus 474 ------------~~~~--v~i~~~-----------~--~~~v~~~L~~~gI~~~~~~~~~vris~~~~~t~e 518 (1049)
.+|+ ++|.+| + +..+.+.|+++||.++..+...|++-++..+|++
T Consensus 345 whgf~~~~~~~~~lDP~K~ti~~pG~~~~g~~~~~Gi~g~~~~~~L~~~~I~~Ek~d~~~vL~l~t~G~t~~ 416 (417)
T PF01276_consen 345 WHGFEGLADDYYMLDPTKLTINTPGIDADGELSELGIPGYIVEKYLREHGIQVEKTDLYNVLFLFTIGDTKE 416 (417)
T ss_dssp TT--TT--TTSEEE-TTEEEEE-STBETTSSB-SS---HHHHHHHHHHTTEE-SEEESSEEEEE--TTS-HH
T ss_pred chhchhcccCccccCCcEEEEEccCcCcCCcccccCCCHHHHHHHHHHcCCEEEeccCccEEEEecCCCCCC
Confidence 1232 666652 2 6788999999999999988899999999988875
No 143
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.74 E-value=4.4e-16 Score=183.82 Aligned_cols=302 Identities=17% Similarity=0.215 Sum_probs=195.0
Q ss_pred HHHHHHHHHHhhC--CCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEE-EcCCCCCccHHHHHhcC---------
Q 001586 634 FNNLGEWLCTITG--FDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCG--------- 701 (1049)
Q Consensus 634 i~el~~~la~l~G--~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VL-ip~saHg~~pa~a~~~G--------- 701 (1049)
..++.+.|+++++ ++. .++.+||+++++++++.+|.|...+|.++|.+|| ...+.||....+....+
T Consensus 87 ~~~la~~l~~~~p~~~~~-v~f~~sGseA~e~A~klar~~~~~~~~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~ 165 (423)
T PRK05964 87 AERLAQRLVALTPGGLDH-VFFSDSGSVAVEVALKMALQYWRNRGEPGRSRFLSLRGGYHGDTIGTMSVGDRGGMHALYT 165 (423)
T ss_pred HHHHHHHHHHhCCCCCCE-EEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHHHHhcCCCcccccccc
Confidence 3478888999884 443 4668999999999999999987666655566777 67889997655432211
Q ss_pred ---CEEEEEcCCCC--CCCCHHHHHHHHHhcCCCeEEEEEEc-CC-cccccc---ccHHHHHHHHHHcCCEEEEeccccc
Q 001586 702 ---MKIVSVGTDAK--GNINIEELRKAAEANRDNLSTLMVTY-PS-THGVYE---EGIDEICKIIHDNGGQVYMDGANMN 771 (1049)
Q Consensus 702 ---~~Vv~V~~d~~--g~iD~~~L~~~i~~~~~~taaV~it~-Pn-~~G~i~---~di~eI~~lah~~G~ll~vD~A~~~ 771 (1049)
..+..+++..+ ...++++|++.++++.+++++|+++. .. ..|+.. +.+++|.++|++||+++++|+++
T Consensus 166 ~~~~~~~~~~~~~~d~~~~~~~~l~~~l~~~~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~-- 243 (423)
T PRK05964 166 PLLFEQVTAPFPPDGYEQATLDALEALLEKHAGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIA-- 243 (423)
T ss_pred CcCCCCEEeCCCcchhHHHHHHHHHHHHHhCCCcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechh--
Confidence 12334444221 12238899999987667899998875 23 356543 25999999999999999999975
Q ss_pred cccCcCCCCc--------cCCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCC
Q 001586 772 AQVGLTSPGY--------IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIA 843 (1049)
Q Consensus 772 a~~gl~~Pg~--------~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~ 843 (1049)
.|+.++|. ..+|++++ .|+|+ +|+-.+|.+++++++...+...... . . ....
T Consensus 244 --tg~gr~G~~~a~~~~~v~pDi~~~--~K~l~----gG~~p~~av~~~~~i~~~~~~~~~~---------~--~-~~~~ 303 (423)
T PRK05964 244 --TGFGRTGTLFACEQAGVSPDIMCL--SKGLT----GGYLPLAATLCTAEIFEAFYSDDRA---------K--A-FMHS 303 (423)
T ss_pred --hCCCcCcchhHHHhcCCCCCeeee--ehhhh----cCcccceEEEEcHHHHHhhhcCCcc---------c--c-cccC
Confidence 33444442 24688776 48873 3433467788888877665311000 0 0 0001
Q ss_pred ccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc--CCee--eccCCCceeeEEEEeccCccccCCCC
Q 001586 844 AAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPIL--FRGVNGTVAHEFIVDLRGLKNTAGIE 919 (1049)
Q Consensus 844 sa~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~--~~v~--~~g~~g~~~~e~iv~~~~~~~~~g~~ 919 (1049)
+++.|+++.++++.+.+..+..+++. ++...+.+++.++|++. +..+ ..+ .|. + +.+.+..- ..+..
T Consensus 304 ~T~~~np~~~aaa~a~l~~l~~~~~~---~~~~~~g~~l~~~l~~l~~~~~i~~vrg-~Gl-~--~~i~l~~~--~~~~~ 374 (423)
T PRK05964 304 PSYTANPLACAAANASLDLFEDEPVL---ERVAALSAGLAEGLEPFRDLPGVADVRV-LGA-I--GAVELDRP--VLERD 374 (423)
T ss_pred CCCCcCHHHHHHHHHHHHHHHhcCHH---HHHHHHHHHHHHHHHhhccCCCeEEeec-ccE-E--EEEEeccC--cchhH
Confidence 12234566666777777777665544 45557788888888765 2221 112 121 1 22333210 00012
Q ss_pred HHHHHHHHHHCCcccCCCCCCCCCEEEEEccCCCCHHHHHHHHHHHHHHHHH
Q 001586 920 PEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREE 971 (1049)
Q Consensus 920 ~~~v~k~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~eeid~fv~aL~~i~~~ 971 (1049)
...+.+.|.++|+.+... .+.+|++|+..+|++|||+++++|.++++|
T Consensus 375 ~~~l~~~l~~~Gv~v~~~----~~~lR~~p~l~~t~edId~~v~~l~~al~~ 422 (423)
T PRK05964 375 GPALRAFALERGVLLRPL----GNTIYLMPPYIITAEELDRITDAIVEVADE 422 (423)
T ss_pred HHHHHHHHHHCCeEEEec----CCEEEEeCCcccCHHHHHHHHHHHHHHHhh
Confidence 567889999999987532 378999999999999999999999998865
No 144
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.74 E-value=1e-15 Score=179.58 Aligned_cols=286 Identities=19% Similarity=0.228 Sum_probs=190.1
Q ss_pred HHHHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHh-cCCC-CCCEEE-EcCCCCCccHHHHHh----------
Q 001586 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKA-RGDH-HRNVCI-IPVSAHGTNPATAAM---------- 699 (1049)
Q Consensus 633 ~i~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~-~G~~-~r~~VL-ip~saHg~~pa~a~~---------- 699 (1049)
...++++.+++++|.+. .+..+||++|++++++++|.|+.. +|.+ +|++|| ...+.||+.-.....
T Consensus 84 ~~~~l~~~l~~~~~~~~-~~~~~SGs~A~e~al~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~~~~ 162 (401)
T PRK00854 84 QLAPLYEELAALTGSHK-VLPMNSGAEAVETAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDARGGF 162 (401)
T ss_pred HHHHHHHHHHhhCCCCE-EEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCceEEEECCCcCCccHHHHhccCCccccccC
Confidence 35578899999999765 477889999999999999887432 2322 245555 677889976544321
Q ss_pred --cCCEEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-ccccccc---cHHHHHHHHHHcCCEEEEeccccccc
Q 001586 700 --CGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQ 773 (1049)
Q Consensus 700 --~G~~Vv~V~~d~~g~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~~---di~eI~~lah~~G~ll~vD~A~~~a~ 773 (1049)
....+..++. .|+++|++++. +++++|++++|+ .+|.+.+ ++++|+++|++||+++++|+++.
T Consensus 163 ~~~~~~~~~~~~-----~d~~~le~~i~---~~~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~--- 231 (401)
T PRK00854 163 GPFTPGFRVVPF-----GDAEALEAAIT---PNTVAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQT--- 231 (401)
T ss_pred CCCCCCeEEeCC-----CCHHHHHHHhC---CCeEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh---
Confidence 1123445554 48999999997 789999999984 5887763 29999999999999999999864
Q ss_pred cCcCCCC--------ccCCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCcc
Q 001586 774 VGLTSPG--------YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAA 845 (1049)
Q Consensus 774 ~gl~~Pg--------~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa 845 (1049)
|+...| ...+|+++++ |+|+ +|...+|++++++++...+.... +. ...+
T Consensus 232 -g~g~~g~~~~~~~~g~~~D~~~~~--K~l~----gg~~~ig~v~~~~~~~~~l~~~~---------~~-----~t~~-- 288 (401)
T PRK00854 232 -GLGRTGKLLAEEHEGIEADVTLIG--KALS----GGFYPVSAVLSNSEVLGVLKPGQ---------HG-----STFG-- 288 (401)
T ss_pred -CCCCCchHhHHhhcCCCCCEEEec--cccc----CCccCeEEEEEcHHHHhcccCCC---------CC-----CCCC--
Confidence 222221 1346988873 8884 34456788998887766543100 00 0111
Q ss_pred chhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc-CCee--eccCCCceeeEEEEeccCccccCCCCHHH
Q 001586 846 PWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPIL--FRGVNGTVAHEFIVDLRGLKNTAGIEPED 922 (1049)
Q Consensus 846 ~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~-~~v~--~~g~~g~~~~e~iv~~~~~~~~~g~~~~~ 922 (1049)
+++..++++.+.|..+..+++ .++..++++++.+.|+++ .... ..+ .+. + +.+.+.. ...+..+
T Consensus 289 --~~~~~~aa~~a~L~~l~~~~~---~~~~~~~~~~l~~~L~~~~~~~~~~~~g-~g~-~--~~i~~~~----~~~~~~~ 355 (401)
T PRK00854 289 --GNPLACAVARAALKVLTEEGM---IENAAEMGAYFLEGLRSIRSNIVREVRG-RGL-M--LAVELEP----EAGGARQ 355 (401)
T ss_pred --cCHHHHHHHHHHHHHHHHcCH---HHHHHHHHHHHHHHHHhhccCceEEEec-cce-E--EEEEEec----CchhHHH
Confidence 233444455566665544443 345556788999999875 2221 111 121 1 2333211 1134678
Q ss_pred HHHHHHHCCcccCCCCCCCCCEEEEEccCCCCHHHHHHHHHHHHHHH
Q 001586 923 VAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIR 969 (1049)
Q Consensus 923 v~k~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~eeid~fv~aL~~i~ 969 (1049)
+++.|.++||.+.... .+.+|++|+..++++|||++++.|++++
T Consensus 356 ~~~~L~~~GV~v~~~~---~~~lR~~p~~~~t~e~i~~~i~~l~~~l 399 (401)
T PRK00854 356 YCEALKERGLLAKDTH---DHTIRLAPPLVITREQVDWALEQIAKVL 399 (401)
T ss_pred HHHHHHHCCeEEecCC---CCEEEEeCCcccCHHHHHHHHHHHHHHh
Confidence 9999999999975322 4799999999999999999999998765
No 145
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.74 E-value=2.7e-16 Score=198.68 Aligned_cols=317 Identities=14% Similarity=0.135 Sum_probs=197.7
Q ss_pred hcHHHHHHHHHHHHHHhhCCCcc--c-cccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHH---HHhcC
Q 001586 628 QGYQEMFNNLGEWLCTITGFDSF--S-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT---AAMCG 701 (1049)
Q Consensus 628 ~G~~~~i~el~~~la~l~G~~~~--~-l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~---a~~~G 701 (1049)
+-..+.+.+.++.+++++|.+.. . ++..++++|. .+++..+. .+++++||++...|.++-.. ++..|
T Consensus 74 ~~~~~~~e~aR~~ia~~lga~~~~~~VvFtsnaT~al---nlva~~l~----~~~gd~Iv~t~~eH~svl~~~~~a~~~G 146 (805)
T PLN02724 74 MRSSDTIESARQQVLEYFNAPPSDYACVFTSGATAAL---KLVGETFP----WSSESHFCYTLENHNSVLGIREYALEKG 146 (805)
T ss_pred hhHHHHHHHHHHHHHHHhCCCccceEEEEeCChHHHH---HHHHHHCC----CCCCCeEEEeeccccchHHHHHHHHHcC
Confidence 33557788999999999998653 2 3333344333 33344331 12467899988888776543 34569
Q ss_pred CEEEEEcCC--------CCCCCCH--HHHHHHHH----h---cCCCeEEEEEEcC-CccccccccHHHHHHHHHHc----
Q 001586 702 MKIVSVGTD--------AKGNINI--EELRKAAE----A---NRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDN---- 759 (1049)
Q Consensus 702 ~~Vv~V~~d--------~~g~iD~--~~L~~~i~----~---~~~~taaV~it~P-n~~G~i~~di~eI~~lah~~---- 759 (1049)
++++.++++ ..|.+|+ ++|++.++ . ..++|++|++++. |.+|.+. |+++|..+++..
T Consensus 147 ~~v~~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l~~~~~~~~~t~LVa~~~vsN~tG~i~-pi~~i~~~~~~~~~~~ 225 (805)
T PLN02724 147 AAAIAVDIEEAANQPTNSQGSVVVKSRGLQRRNTSKLQKREDDGEAYNLFAFPSECNFSGAKF-PLDLVKLIKDNQHSNF 225 (805)
T ss_pred CeEEeccchhccccccccccccccchhhhhhhhhhhhccccccCCCcceEEEEccccCCCCcC-CHHHHHHHHHhccccc
Confidence 999999886 3455654 67777642 1 1246788888887 5699998 799775555432
Q ss_pred ---C-CEEEEeccccccccCcCCCCccCCcEEEeCCCcccccCCCCCCC-ceeEEEEcccccccCCCCcccc-CC-----
Q 001586 760 ---G-GQVYMDGANMNAQVGLTSPGYIGADVCHLNLHKTFCIPHGGGGP-GMGPIGVKKHLAPFLPSHPVVS-TG----- 828 (1049)
Q Consensus 760 ---G-~ll~vD~A~~~a~~gl~~Pg~~GaDi~~~s~hK~f~~P~g~GGP-g~G~i~~~~~l~~~lpg~~vg~-t~----- 828 (1049)
| ++++||+|+..+...+ ...++++|++++|+||+| ||| |+|++++++++...+.....|. +.
T Consensus 226 ~~~g~~~v~vDaaQ~~g~~pi-Dv~~~~~Dfl~~S~HK~~------GgP~G~G~L~vr~~~~~~l~p~~~GGg~~~~~~~ 298 (805)
T PLN02724 226 SKSGRWMVLLDAAKGCGTSPP-DLSRYPADFVVVSFYKIF------GYPTGLGALLVRRDAAKLLKKKYFGGGTVAASIA 298 (805)
T ss_pred ccCcceEEEeehhhhcCCCCC-ChhhcCCCEEEEecceec------cCCCCceEEEEehhhhhhhcCCccCCCceEEEec
Confidence 3 5799999987665543 234679999999999998 456 7899999987655544333322 11
Q ss_pred C--C------CCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhccC------Ce-e
Q 001586 829 G--I------PAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHY------PI-L 893 (1049)
Q Consensus 829 ~--~------~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~~------~v-~ 893 (1049)
+ . ...+.+.+|.++.+ ...+..+. ..+..-|+..+.++...+++|+.++|+++. .+ +
T Consensus 299 ~~~~~~~~~~~~~rfE~GT~n~~~-----i~~l~aal---~~l~~ig~~~I~~~~~~L~~~l~~~L~~l~~~~g~~~v~i 370 (805)
T PLN02724 299 DIDFVKRRERVEQRFEDGTISFLS-----IAALRHGF---KLLNRLTISAIAMHTWALTHYVANSLRNLKHGNGAPVCVL 370 (805)
T ss_pred ccceeeccccHHHHhcCCCcchhH-----HHHHHHHH---HHHHHhChHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEE
Confidence 0 0 00112344444332 12223334 444344677778888899999999998752 12 2
Q ss_pred eccCC------CceeeEEEEeccCccccCCCCHHHHHHHHHHCCcccCC-CC-CC-------------------------
Q 001586 894 FRGVN------GTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPT-MS-WP------------------------- 940 (1049)
Q Consensus 894 ~~g~~------g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~-~~-~p------------------------- 940 (1049)
| |+. ......+.|.+.... ...+...++.+.+.++||.+++ .. .|
T Consensus 371 y-g~~~~~~~~~~r~~ivsFnv~~~~-~~~v~~~~v~~l~~~~gI~vR~G~~Ca~~~~~~~lg~~~~~l~~~~~~~~~c~ 448 (805)
T PLN02724 371 Y-GNHTFKLEFHIQGPIVTFNLKRAD-GSWVGHREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHKDLQANFEAGHVCW 448 (805)
T ss_pred c-CCCCCCCCcccccCEEEEEEEcCC-CCEeCHHHHHHHHHhcCcEEeeccccCchHHHHHcCCCHHHHHHHhhcCCccC
Confidence 3 221 011122333332110 0113456677666778998742 11 01
Q ss_pred ---------CCCEEEEEccCCCCHHHHHHHHHHHHHHH
Q 001586 941 ---------VPGTLMIEPTESESKEELDRYCDALISIR 969 (1049)
Q Consensus 941 ---------~~~~lri~~t~~~t~eeid~fv~aL~~i~ 969 (1049)
..|++|+|+..++|.+|||+|+++|++..
T Consensus 449 ~~~~~~~~~~~G~vRvS~g~ynt~eDvd~lv~~l~~~~ 486 (805)
T PLN02724 449 DDQDVIHGRPTGAVRVSFGYMSTFEDCQKFIDFIISSF 486 (805)
T ss_pred chhheecCcccceEEEEcCccCCHHHHHHHHHHHHHHh
Confidence 02889999999999999999999999864
No 146
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.74 E-value=4.5e-17 Score=171.56 Aligned_cols=310 Identities=14% Similarity=0.151 Sum_probs=213.9
Q ss_pred CCccccccCCCCCCCCCcHHHHHHHHhCCccccccCCChhhHhhhHHHHHHHHHHHHHHHhCCCCcceEeccchHHHHHH
Q 001586 164 NKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEA 243 (1049)
Q Consensus 164 n~~~~~~lG~g~y~~~~p~~i~~~~~~~~~~~t~ytpyq~e~sqg~le~l~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA 243 (1049)
|.-.+||+|...+|..+.+..+ .++..+ .+|-......|+-..+.+++..+|++-|-+. ..+|+++-.+..+
T Consensus 71 nFcaNnYLGLsshPeii~a~~~--aleeyG----aGlssvrfIcGtq~iHk~LE~kiAqfh~rED--~ilypscfdANag 142 (417)
T KOG1359|consen 71 NFCANNYLGLSSHPEIINAGQK--ALEEYG----AGLSSVRFICGTQDIHKLLESKIAQFHGRED--TILYPSCFDANAG 142 (417)
T ss_pred eecccccccccCChHHHHHHHH--HHHHhC----CCccceeEEecchHHHHHHHHHHHHHhCCCc--eEEeccccccchH
Confidence 3346789999998887777764 454211 1455666778899999999999999999877 5566555433333
Q ss_pred HHHHhhhccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCcchhhc--c--CCCEeEEEEEcC--CCCeeeccHHH
Q 001586 244 MAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKDIDY--K--SGDVCGVLVQYP--GTEGEVLDYGD 317 (1049)
Q Consensus 244 ~~~a~~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~~~~l~~--l--~~~t~~V~v~~p--n~~G~i~di~~ 317 (1049)
+.-|+ .+ +.|-|+.++.+|.|+++.++. ++ ...++|+-+++. + .+--.-++++.. +++|.+.|+++
T Consensus 143 ~feai-l~--pedAvfSDeLNhASIIdGirL-ck----ry~h~dv~~l~~~l~~a~k~r~klv~TDg~FSMDGdiaPl~e 214 (417)
T KOG1359|consen 143 AFEAI-LT--PEDAVFSDELNHASIIDGIRL-CK----RYRHVDVFDLEHCLISACKMRLKLVVTDGVFSMDGDIAPLEE 214 (417)
T ss_pred HHHHh-cC--hhhhhhccccccchhhhhhHH-Hh----hhccchhHHHHHHHHHhhhheEEEEEecceeccCCCcccHHH
Confidence 33333 12 778899999999999999864 55 344566656653 1 112233566765 78999999999
Q ss_pred HHHHHHhCCcEEEEEeccccccCCCCCC-----ccc----ceEEEecC-ccccccCCCCCCceEEEEEchhHHhcCCCce
Q 001586 318 FIKNAHANGVKVVMATDLLALTILKPPG-----ELG----ADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRI 387 (1049)
Q Consensus 318 I~~~ah~~galliV~a~~~alg~l~~p~-----~~G----aDivvgs~-k~lg~P~~~GGP~~G~l~~~~~l~~~lpgri 387 (1049)
|++++++||+|++++ +.++.+.+...| ++| +||+.++. |.+|+ -+.||..+...++..+
T Consensus 215 i~~La~kYgaLlfiD-ecHaTgf~G~tGrGt~E~~~vm~~vdiinsTLgKAlGg------a~GGyttgp~~li~ll---- 283 (417)
T KOG1359|consen 215 ISQLAKKYGALLFID-ECHATGFFGETGRGTAEEFGVMGDVDIINSTLGKALGG------ASGGYTTGPKPLISLL---- 283 (417)
T ss_pred HHHHHHhcCcEEEEe-ecccceeecCCCCChHHHhCCCCcceehhhhhhhhhcC------CCCCCccCChhHHHHH----
Confidence 999999999999993 455666554332 234 78888885 88864 3456877777666544
Q ss_pred eeeeecCCCCcceeeecccccccccccccCCCccchhHH---HHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHhhcC
Q 001586 388 VGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQAL---LANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKL 464 (1049)
Q Consensus 388 vG~s~d~~g~~~~~l~lqtreq~irrekaTsni~t~~~l---~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~ 464 (1049)
|.++.+++++++.. .+..+..|...+.. .++..+...+++++++..+..
T Consensus 284 -------------------------rqr~RpylFSnslppavV~~a~ka~dllm~s---~~~i~~~~a~~qrfr~~me~a 335 (417)
T KOG1359|consen 284 -------------------------RQRSRPYLFSNSLPPAVVGMAAKAYDLLMVS---SKEIQSRQANTQRFREFMEAA 335 (417)
T ss_pred -------------------------HhcCCceeecCCCChhhhhhhHHHHHHHHhh---HHHHHHHHHHHHHHHHHHHhc
Confidence 22344555555443 44445556555543 455667788899999998887
Q ss_pred CCeEEcCCC-CcceEEEecCC-HHHHHHHHHHcCCeeee-----ec--CCeEEEEeccCCCHHHHHHHHHHHhC
Q 001586 465 GTVEVQGLP-FFDTVKVKCAD-AHAIASAAYKIEMNLRV-----VD--SNTVTASFDETTTLEDVDKLFIVFAG 529 (1049)
Q Consensus 465 g~~~v~~~~-~~~~v~i~~~~-~~~v~~~L~~~gI~~~~-----~~--~~~vris~~~~~t~edid~lv~aL~~ 529 (1049)
| |++.+.. ..-++.+.... +...++.|.++||++-- ++ ...+|+.++..+|+||||+++++|..
T Consensus 336 G-ftIsg~~hPI~pv~lGda~lA~~~ad~lLk~Gi~Vigfs~PvVP~gkariRVqiSAaHt~edid~~i~Af~~ 408 (417)
T KOG1359|consen 336 G-FTISGASHPICPVMLGDARLASKMADELLKRGIYVIGFSYPVVPKGKARIRVQISAAHTEEDIDRLIEAFSE 408 (417)
T ss_pred C-ceecCCCCCccceecccHHHHHHHHHHHHhcCceEEeecCCcCCCCceEEEEEEehhcCHHHHHHHHHHHHH
Confidence 7 9987532 23345554333 77899999999998722 22 25699999999999999999999963
No 147
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.73 E-value=6.3e-16 Score=177.29 Aligned_cols=313 Identities=17% Similarity=0.189 Sum_probs=200.2
Q ss_pred cccccCCCCCCCCCcHHHHHHHHhCCcccccc-CCC-hhhHhhhHHHHHHHHHHHHHHHhCCCCcceEeccchHHHHHHH
Q 001586 167 YKSFIGMGYYNTHVPPVILRNIMENPAWYTQY-TPY-QAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAM 244 (1049)
Q Consensus 167 ~~~~lG~g~y~~~~p~~i~~~~~~~~~~~t~y-tpy-q~e~sqg~le~l~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~ 244 (1049)
+.+|.|.-|.++--|+.+...+.+ ++..| .++ ..+...|......++++.+++++|++. ..++.+||++..++
T Consensus 3 ~~~~~~~~~~~~~~~~~v~~a~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~--~iv~~sg~~a~~~~ 77 (349)
T cd06454 3 VLNFCSNDYLGLANHPEVIEAAKE---ALDKYGVGAGGSRLISGTSDLHEELEEELAEFHGKEA--ALVFSSGYAANDGV 77 (349)
T ss_pred ceecccCCccccCCCHHHHHHHHH---HHHHhCCCCCCcCeecCCchHHHHHHHHHHHHhCCCC--EEEeccHHHHHHHH
Confidence 445666666665533333333333 12222 111 112334556666778899999999864 45667778777765
Q ss_pred HHHhhhccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeC---cchhhc-cC-----CCEeEEEEEcC-CCCeeecc
Q 001586 245 AMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSD---LKDIDY-KS-----GDVCGVLVQYP-GTEGEVLD 314 (1049)
Q Consensus 245 ~~a~~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~---~~~l~~-l~-----~~t~~V~v~~p-n~~G~i~d 314 (1049)
+.++. ++||+|++++..|+++...++ ..|++++.++ .+++++ +. +.+++|++.++ |.+|.+.|
T Consensus 78 ~~~~~---~~gd~Vl~~~~~~~~~~~~~~----~~g~~~~~~~~~~~~~le~~i~~~~~~~~~~~v~~~~~~~~tG~~~~ 150 (349)
T cd06454 78 LSTLA---GKGDLIISDSLNHASIIDGIR----LSGAKKRIFKHNDMEDLEKLLREARRPYGKKLIVTEGVYSMDGDIAP 150 (349)
T ss_pred HHHhc---CCCCEEEEehhhhHHHHHHHH----HcCCceEEecCCCHHHHHHHHHHhhccCCCeEEEEeccccCCCCccC
Confidence 55442 378999999999999887764 3577777653 345555 32 35677777777 78999999
Q ss_pred HHHHHHHHHhCCcEEEEEeccccccCCC---------CCCcccceEEEecC-ccccccCCCCCCceEEEEEchhHHhcCC
Q 001586 315 YGDFIKNAHANGVKVVMATDLLALTILK---------PPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMP 384 (1049)
Q Consensus 315 i~~I~~~ah~~galliV~a~~~alg~l~---------~p~~~GaDivvgs~-k~lg~P~~~GGP~~G~l~~~~~l~~~lp 384 (1049)
+++|+++||++|++++++. ..+.+.+. .....++|++++|. |.|+. |+ |+++.++++.+.+.
T Consensus 151 ~~~i~~~~~~~~~~livD~-a~~~g~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~------~g-G~i~~~~~~~~~~~ 222 (349)
T cd06454 151 LPELVDLAKKYGAILFVDE-AHSVGVYGPHGRGVEEFGGLTDDVDIIMGTLGKAFGA------VG-GYIAGSKELIDYLR 222 (349)
T ss_pred HHHHHHHHHHcCCEEEEEc-cccccccCCCCCChhhhccccccCcEEEeechhhhcc------cC-CEEECCHHHHHHHH
Confidence 9999999999999999942 33433221 12456899999998 76653 22 57777777665441
Q ss_pred CceeeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHhhcC
Q 001586 385 GRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKL 464 (1049)
Q Consensus 385 grivG~s~d~~g~~~~~l~lqtreq~irrekaTsni~t~~~l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~ 464 (1049)
... ..+. ..++.| .....+..+++ .++.. .+++.++..++.+++.+.|+++
T Consensus 223 ~~~----------~~~~------------~~~~~~---~~~~~a~~~~l--~~~~~--~~~~~~~~~~~~~~l~~~l~~~ 273 (349)
T cd06454 223 SYA----------RGFI------------FSTSLP---PAVAAAALAAL--EVLQG--GPERRERLQENVRYLRRGLKEL 273 (349)
T ss_pred Hhc----------hhhh------------ccCCCC---HHHHHHHHHHH--HHHhc--CHHHHHHHHHHHHHHHHHHHhc
Confidence 100 0000 001111 12333444443 33322 4667889999999999999988
Q ss_pred CCeEEcCCCCcceEEEecC-C--HHHHHHHHHHcCCeeeee-------cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001586 465 GTVEVQGLPFFDTVKVKCA-D--AHAIASAAYKIEMNLRVV-------DSNTVTASFDETTTLEDVDKLFIVFAG 529 (1049)
Q Consensus 465 g~~~v~~~~~~~~v~i~~~-~--~~~v~~~L~~~gI~~~~~-------~~~~vris~~~~~t~edid~lv~aL~~ 529 (1049)
| +.+...+....+.+..+ . ..++.+.|.++||.+... ..+.+|++++.++|++|+++++++|+.
T Consensus 274 g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~~~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~ 347 (349)
T cd06454 274 G-FPVGGSPSHIIPPLIGDDPAKAVAFSDALLERGIYVQAIRYPTVPRGTARLRISLSAAHTKEDIDRLLEALKE 347 (349)
T ss_pred C-CcccCCCCCcEEEEeCCChHHHHHHHHHHHhCCceEEEecCCccCCCCCeEEEEEeCCCCHHHHHHHHHHHHH
Confidence 7 77654322112233233 2 678999999999987542 136899999999999999999999863
No 148
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.73 E-value=4.3e-16 Score=183.29 Aligned_cols=290 Identities=18% Similarity=0.207 Sum_probs=187.8
Q ss_pred HHHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCEEEEEcCCCCC
Q 001586 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKG 713 (1049)
Q Consensus 634 i~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~Vv~V~~d~~g 713 (1049)
..++++.+++++|.+. .+..++|++++.+++.++.. ..+++.|+++...|++....+...|.+++.++.
T Consensus 93 ~~~Le~~la~~~g~~~-~i~~~sG~~a~~~~i~~l~~------~~~g~~vi~~~~~h~s~~~~~~~~g~~~~~~~~---- 161 (410)
T PRK13392 93 HVLLERELADLHGKES-ALLFTSGYVSNDAALSTLGK------LLPGCVILSDALNHASMIEGIRRSGAEKQVFRH---- 161 (410)
T ss_pred HHHHHHHHHHHhCCCC-EEEECcHHHHHHHHHHHHhc------CCCCCEEEEehhhhHHHHHHHHHcCCeEEEEeC----
Confidence 4588999999999764 46677888776555543210 013567777777788776667788999887764
Q ss_pred CCCHHHHHHHHHhcC-CCeEEEEEEcCC-ccccccccHHHHHHHHHHcCCEEEEeccccccccCcC------CCC-ccCC
Q 001586 714 NINIEELRKAAEANR-DNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT------SPG-YIGA 784 (1049)
Q Consensus 714 ~iD~~~L~~~i~~~~-~~taaV~it~Pn-~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~------~Pg-~~Ga 784 (1049)
.|.+++++.+++.. +++++|++++|+ .+|.+. |+++|.++|+++|+++++|+++..+..+-. .++ ...+
T Consensus 162 -~d~~~l~~~l~~~~~~~t~~v~i~~~~n~tG~~~-~l~~i~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~~ 239 (410)
T PRK13392 162 -NDLADLEEQLASVDPDRPKLIAFESVYSMDGDIA-PIEAICDLADRYNALTYVDEVHAVGLYGARGGGIAERDGLMDRI 239 (410)
T ss_pred -CCHHHHHHHHHhccCCCCEEEEEeCCCCCCcccc-cHHHHHHHHHHcCCEEEEECCccccCcCCCCCchhhhccCCCCC
Confidence 26778888776443 578999999995 589887 799999999999999999999763321110 011 1246
Q ss_pred cEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHc
Q 001586 785 DVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMG 864 (1049)
Q Consensus 785 Di~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG 864 (1049)
|+++.+++|+|+. +| |+++.++++.+.+.... ... ..+.+. ++..+.++.+.+..+.
T Consensus 240 div~~tlsK~~g~------~G-G~~~~~~~~~~~l~~~~-----------~~~-~~s~~~----~~~~~~a~~aaL~~~~ 296 (410)
T PRK13392 240 DMIQGTLAKAFGC------LG-GYIAASADLIDFVRSFA-----------PGF-IFTTAL----PPAVAAGATAAIRHLK 296 (410)
T ss_pred cEEEEEChHhhhc------cc-chhhcCHHHHHHHHHhC-----------cch-hccCcC----CHHHHHHHHHHHHHHh
Confidence 8888899999853 33 67777766555321000 000 001111 1122333444555443
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHH-HCCcccCCCCCC-C
Q 001586 865 SKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-DYGFHGPTMSWP-V 941 (1049)
Q Consensus 865 ~eGl~~~~~~~~~~a~yL~~~L~~~-~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~-~~Gi~~~~~~~p-~ 941 (1049)
..+ +..++..++++++.+.|++. +++. ++ .+.+ +.+.+. .+....+++++|. ++||.+....+| +
T Consensus 297 ~~~--~~~~~~~~~~~~l~~~L~~~g~~~~-~~-~~~~---~~i~~~-----~~~~~~~~~~~L~~~~GI~v~~~~~p~~ 364 (410)
T PRK13392 297 TSQ--TERDAHQDRVAALKAKLNANGIPVM-PS-PSHI---VPVMVG-----DPTLCKAISDRLMSEHGIYIQPINYPTV 364 (410)
T ss_pred cCH--HHHHHHHHHHHHHHHHHHHcCCCCC-CC-CCCE---EEEEeC-----CHHHHHHHHHHHHHhCCEEEeeeCCCCC
Confidence 332 33355667889999999875 4432 21 2222 223322 0123568899886 689998654444 1
Q ss_pred ---CCEEEEEccCCCCHHHHHHHHHHHHHHHHH
Q 001586 942 ---PGTLMIEPTESESKEELDRYCDALISIREE 971 (1049)
Q Consensus 942 ---~~~lri~~t~~~t~eeid~fv~aL~~i~~~ 971 (1049)
...+||+++..+|++|+|+++++|.++.++
T Consensus 365 ~~~~~~lRis~~~~~t~edid~l~~aL~~~~~~ 397 (410)
T PRK13392 365 PRGTERLRITPTPLHDDEDIDALVAALVAIWDR 397 (410)
T ss_pred CCCCceEEEEECCCCCHHHHHHHHHHHHHHHHH
Confidence 268999999999999999999999988654
No 149
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.73 E-value=9.2e-16 Score=177.53 Aligned_cols=211 Identities=14% Similarity=0.122 Sum_probs=157.0
Q ss_pred HHHHHHHHHhCCCCcceEeccchHHHHHHHHHHhhhccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCcc---hh
Q 001586 215 NFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK---DI 291 (1049)
Q Consensus 215 e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a~~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~~~---~l 291 (1049)
.+++.+|+|-|.+. +.++.+|++|+.++++++ +. +||+||+++..|..+...++..++.+|+++.+++.. ++
T Consensus 66 ~le~~la~LEg~~~--a~~~~SGmaAi~~~~~~l-l~--~GD~Vv~~~~~Yg~t~~l~~~~l~~~Gi~v~~vd~~d~~~l 140 (395)
T PRK08114 66 SLQEAMCELEGGAG--CALYPCGAAAVANAILAF-VE--QGDHVLMTGTAYEPTQDFCSKILSKLGVTTTWFDPLIGADI 140 (395)
T ss_pred HHHHHHHHHhCCCe--EEEEhHHHHHHHHHHHHH-cC--CCCEEEEeCCCcHHHHHHHHHHHHhcCcEEEEECCCCHHHH
Confidence 35689999999865 778899999999887765 33 899999999999999999877778899999999864 45
Q ss_pred hc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCC--cEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCCC
Q 001586 292 DY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANG--VKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYG 366 (1049)
Q Consensus 292 ~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~g--alliV~a~~~alg~l~~p~~~GaDivvgs~-k~lg~P~~~G 366 (1049)
++ ++++|++|++++| |++|.+.||++|+++||++| ++++|+ +.++.+.+..|.+|||||+++|+ |+|++|-..
T Consensus 141 ~~~l~~~TrlV~~EtpsNp~~~v~DI~~Ia~ia~~~g~g~~lvVD-nT~a~p~~~~pl~~GaDivv~S~tKyl~Ghsdv- 218 (395)
T PRK08114 141 AKLIQPNTKVVFLESPGSITMEVHDVPAIVAAVRSVNPDAVIMID-NTWAAGVLFKALDFGIDISIQAGTKYLVGHSDA- 218 (395)
T ss_pred HHhcCCCceEEEEECCCCCCCEeecHHHHHHHHHHhCCCCEEEEE-CCCccccccCHHHcCCcEEEEcCcccccCCCcc-
Confidence 55 8889999999997 89999999999999999985 999994 56677888899999999999999 667654222
Q ss_pred CCceEEEEEchhHHhcCCCceeeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcchHHHH
Q 001586 367 GPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTI 446 (1049)
Q Consensus 367 GP~~G~l~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irrekaTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i 446 (1049)
.+|+++++++....+- ..++.-|. .. ++. ..|+...|-+-|.-.
T Consensus 219 --~~G~v~~~~~~~~~l~-------------------------~~~~~~G~--~~--~p~-----~a~l~~rgl~TL~lR 262 (395)
T PRK08114 219 --MIGTAVANARCWEQLR-------------------------ENSYLMGQ--MV--DAD-----TAYMTSRGLRTLGVR 262 (395)
T ss_pred --eeEEEEcCHHHHHHHH-------------------------HHHHhccC--CC--CHH-----HHHHHHcCCCcHHHH
Confidence 4577777665433220 00011110 00 111 113444555555566
Q ss_pred HHHHHHHHHHHHHHhhcCCCeE
Q 001586 447 AQRVHGLAGTFALGLKKLGTVE 468 (1049)
Q Consensus 447 a~~~~~~a~~l~~~L~~~g~~~ 468 (1049)
.+|..++|..+++.|++...++
T Consensus 263 ~~~~~~na~~va~~L~~hp~V~ 284 (395)
T PRK08114 263 LRQHEESSLKVAEWLAEHPEVA 284 (395)
T ss_pred HHHHHHHHHHHHHHHHcCCCEe
Confidence 6778899999999999875443
No 150
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.73 E-value=5.8e-16 Score=181.95 Aligned_cols=292 Identities=16% Similarity=0.199 Sum_probs=189.3
Q ss_pred HHHHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCEEEEEcCCCC
Q 001586 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK 712 (1049)
Q Consensus 633 ~i~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~Vv~V~~d~~ 712 (1049)
...++++.+++++|.+. .+..+||++++++++.++. +. .+++.|+.....|++....+...|.+++.++.
T Consensus 91 ~~~~le~~la~~~g~~~-~~~~~SG~~An~~ai~~l~-----~~-~~g~~I~~~~~~H~s~~~~~~~~g~~~~~~~~--- 160 (406)
T PRK13393 91 YHVLLEAELADLHGKEA-ALLFTSGYVSNWAALSTLG-----SR-LPGCVILSDELNHASMIEGIRHSRAEKRIFRH--- 160 (406)
T ss_pred HHHHHHHHHHHHhCCCc-EEEeCCcHHHHHHHHHHhh-----cC-CCCCEEEEccchhHHHHHHHHHcCCeEEEeCC---
Confidence 45688999999999765 4667788877766555331 11 13466777778888776667778888888875
Q ss_pred CCCCHHHHHHHHHhcC-CCeEEEEEEcCC-ccccccccHHHHHHHHHHcCCEEEEeccccccccC-cC-----CCC-ccC
Q 001586 713 GNINIEELRKAAEANR-DNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVG-LT-----SPG-YIG 783 (1049)
Q Consensus 713 g~iD~~~L~~~i~~~~-~~taaV~it~Pn-~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~g-l~-----~Pg-~~G 783 (1049)
.|++++++.+++.. +++++|+++.++ .+|.+. |+++|.++|+++|+++++|+++..+..| .. .++ ...
T Consensus 161 --~d~~~l~~~l~~~~~~~~~~v~~~~v~~~~G~~~-~l~~i~~l~~~~~~~livDea~~~g~~g~~G~g~~~~~~~~~~ 237 (406)
T PRK13393 161 --NDPADLERKLSDLDPHRPKLVAFESVYSMDGDIA-PIAEICDVAEKHGAMTYLDEVHAVGLYGPRGGGIAEREGLADR 237 (406)
T ss_pred --CCHHHHHHHHHhccCCCCEEEEEcCCCCCCCchh-CHHHHHHHHHHcCCEEEEECCccccccCCCCCchhhhcCCCCC
Confidence 48899998887543 367889888884 689998 7999999999999999999997643311 10 111 113
Q ss_pred CcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHH
Q 001586 784 ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMM 863 (1049)
Q Consensus 784 aDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~l 863 (1049)
.|+++.++.|.|+. +| |+++.++++...+.... +....++ + +++..+.++.+.+..+
T Consensus 238 ~~i~~~tlsKa~g~------~G-G~~~~~~~~~~~l~~~~-----------~~~~~t~-~----~~p~~~aa~~aaL~~~ 294 (406)
T PRK13393 238 LTIIEGTLAKAFGV------MG-GYITGSAALCDFIRSFA-----------SGFIFTT-S----LPPAVAAGALASVRHL 294 (406)
T ss_pred CeEEEEeCchhhcc------cC-ceeeCCHHHHHHHHHhC-----------cCceecC-c----cCHHHHHHHHHHHHHH
Confidence 58887788898853 33 67777766554432100 0000000 1 1222233444555555
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHHH-CCcccCCCCCC-
Q 001586 864 GSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMD-YGFHGPTMSWP- 940 (1049)
Q Consensus 864 G~eGl~~~~~~~~~~a~yL~~~L~~~-~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~-~Gi~~~~~~~p- 940 (1049)
...+.. .++..++.+++.++|++. +++. ++ .++. +.+.+. ......++.++|.+ +||.+....+|
T Consensus 295 ~~~~~~--~~~~~~~~~~l~~~L~~~g~~~~-~~-~~~i---~~v~~~-----~~~~~~~l~~~L~~~~Gi~v~~~~~p~ 362 (406)
T PRK13393 295 KASSAE--RERHQDRVARLRARLDKAGIPHL-PN-PSHI---VPVMVG-----DPVLCKQISDELLDRYGIYVQPINYPT 362 (406)
T ss_pred hhCHHH--HHHHHHHHHHHHHHHHHcCCCcC-CC-CCCe---EEEEeC-----CHHHHHHHHHHHHHhCCEEEEeECCCC
Confidence 333322 234567788999999874 4432 22 2332 122221 01235688999987 59998654444
Q ss_pred C---CCEEEEEccCCCCHHHHHHHHHHHHHHHHHH
Q 001586 941 V---PGTLMIEPTESESKEELDRYCDALISIREEI 972 (1049)
Q Consensus 941 ~---~~~lri~~t~~~t~eeid~fv~aL~~i~~~i 972 (1049)
+ .+.+|++|+..+|++|+|+++++|++++.++
T Consensus 363 ~p~g~~~iRis~~~~~t~edid~l~~~l~~~~~~~ 397 (406)
T PRK13393 363 VPRGTERLRITPSPLHTDADIEHLVQALSEIWARL 397 (406)
T ss_pred CCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHhc
Confidence 1 2689999999999999999999999987653
No 151
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.73 E-value=5.2e-16 Score=182.36 Aligned_cols=292 Identities=17% Similarity=0.182 Sum_probs=187.2
Q ss_pred HHHHHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCEEEEEcCCC
Q 001586 632 EMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA 711 (1049)
Q Consensus 632 ~~i~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~Vv~V~~d~ 711 (1049)
+...++++.+++++|.+. .+..++|++++..++.++..+ .+++.|+.....|++....+...|.++..++.
T Consensus 91 ~~~~~l~~~la~~~g~~~-~~~~~sG~~an~~ai~~l~~~------~~~~~i~~~~~~h~s~~~~~~~~~~~~~~~~~-- 161 (407)
T PRK09064 91 HYHVELERELADLHGKEA-ALVFTSGYVSNDATLSTLAKL------IPDCVIFSDELNHASMIEGIRRSRCEKHIFRH-- 161 (407)
T ss_pred HHHHHHHHHHHHHhCCCc-EEEECcHHHHHHHHHHHHhCC------CCCCEEEEeCcchHHHHHHHHHcCCcEEEECC--
Confidence 445688999999999654 466778887765555544321 13455555545565554456667888776665
Q ss_pred CCCCCHHHHHHHHHhcC-CCeEEEEEEcCC-ccccccccHHHHHHHHHHcCCEEEEeccccccccC-cC-----CCC-cc
Q 001586 712 KGNINIEELRKAAEANR-DNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVG-LT-----SPG-YI 782 (1049)
Q Consensus 712 ~g~iD~~~L~~~i~~~~-~~taaV~it~Pn-~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~g-l~-----~Pg-~~ 782 (1049)
.|+++|++++++.. +++++|++++|+ ..|.+. |+++|.++|+++|++++||+++..+..| .. ..+ ..
T Consensus 162 ---~d~~~le~~l~~~~~~~~~~v~~~~v~s~~G~~~-~l~~i~~l~~~~~~~livDEa~~~G~~g~~g~g~~~~~~~~~ 237 (407)
T PRK09064 162 ---NDVAHLEELLAAADPDRPKLIAFESVYSMDGDIA-PIAEICDLADKYNALTYLDEVHAVGMYGPRGGGIAERDGLMD 237 (407)
T ss_pred ---CCHHHHHHHHHhccCCCCeEEEEeCCCCCCcccc-CHHHHHHHHHHcCCEEEEECCCcccccCCCCCChHHhcCCCC
Confidence 48899999987543 578899999984 589887 7999999999999999999997533211 00 011 11
Q ss_pred CCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHH
Q 001586 783 GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAM 862 (1049)
Q Consensus 783 GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~ 862 (1049)
.+|+++.+++|.|+. +| |++++++++...+.... ...... .+. ++..+.++.+.+..
T Consensus 238 ~~div~~t~sKa~g~------~G-G~~~~~~~~~~~l~~~~-----------~~~~~t-~~~----~~~~~~aa~~al~~ 294 (407)
T PRK09064 238 RIDIIEGTLAKAFGV------MG-GYIAGSAALVDAVRSYA-----------PGFIFT-TSL----PPAIAAAALASIRH 294 (407)
T ss_pred CCeEEEEecchhhhc------cC-ceEecCHHHHHHHHHhC-----------cccccc-CcC----CHHHHHHHHHHHHH
Confidence 458888889998853 22 77877776555431100 000000 011 12223334455555
Q ss_pred HchhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHHH-CCcccCCCCCC
Q 001586 863 MGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMD-YGFHGPTMSWP 940 (1049)
Q Consensus 863 lG~eGl~~~~~~~~~~a~yL~~~L~~~-~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~-~Gi~~~~~~~p 940 (1049)
+...+ ...++...+++++.++|++. +++. ++.+++ +.+.++. .....++.++|.+ +||.+....+|
T Consensus 295 ~~~~~--~~~~~~~~~~~~l~~~L~~~g~~~~--~~~~~i---v~i~~~~-----~~~~~~l~~~L~~~~gi~v~~~~~p 362 (407)
T PRK09064 295 LKESN--EERERHQERAAKLKAALDAAGIPVM--PNESHI---VPVMVGD-----PEKCKKASDMLLEEHGIYVQPINYP 362 (407)
T ss_pred HhcCH--HHHHHHHHHHHHHHHHHHHcCCCCC--CCCCCE---EEEEeCC-----HHHHHHHHHHHHHhCCEEEeeECCC
Confidence 54432 23456677889999999875 4442 222222 2233220 1235689998874 69998655444
Q ss_pred -C---CCEEEEEccCCCCHHHHHHHHHHHHHHHHH
Q 001586 941 -V---PGTLMIEPTESESKEELDRYCDALISIREE 971 (1049)
Q Consensus 941 -~---~~~lri~~t~~~t~eeid~fv~aL~~i~~~ 971 (1049)
+ .+.+||+++..+|++|+|+++++|++++++
T Consensus 363 ~~~~~~~~lRis~~~~~t~edi~~l~~~l~~~~~~ 397 (407)
T PRK09064 363 TVPRGTERLRITPTPFHTDEMIDHLVEALVEVWAR 397 (407)
T ss_pred CCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHH
Confidence 2 257999999999999999999999998754
No 152
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.73 E-value=2.9e-15 Score=173.26 Aligned_cols=279 Identities=17% Similarity=0.146 Sum_probs=185.0
Q ss_pred HHHHHHHHHHHHHhCCCCcceEeccchHHHHHHHHHHhhhccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCcc-
Q 001586 211 ESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK- 289 (1049)
Q Consensus 211 e~l~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a~~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~~~- 289 (1049)
..+.++++.+|+++|+ .++.++.|+|.+..+++.++. ++|++|++++..|.+....+ +..|++++.++.+
T Consensus 44 ~~~~~l~~~la~~~g~--~~i~~~~g~t~al~~~l~~~~---~~gd~Vl~~~~~~~~~~~~~----~~~g~~~~~v~~~~ 114 (361)
T cd06452 44 PPIKDFHHDLAEFLGM--DEARVTPGAREGKFAVMHSLC---EKGDWVVVDGLAHYTSYVAA----ERAGLNVREVPNTG 114 (361)
T ss_pred chHHHHHHHHHHHcCC--ceEEEeCCHHHHHHHHHHHhc---CCCCEEEEcCCcchHHHHHH----HhcCCEEEEEecCC
Confidence 3577888999999998 468899999987777666542 37899999999998887554 4568888887542
Q ss_pred ---------hhhc-cC-------CCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCC-CCCCcccce
Q 001586 290 ---------DIDY-KS-------GDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTIL-KPPGELGAD 350 (1049)
Q Consensus 290 ---------~l~~-l~-------~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l-~~p~~~GaD 350 (1049)
++++ ++ +++++|++++| |++|.+.|+++|+++||++|++++|+. ..+.+.+ .++.++|+|
T Consensus 115 ~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~~~~~~i~~~~~~~~~~vivD~-a~~~g~~~~~~~~~~~d 193 (361)
T cd06452 115 HPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLHDAKKIAKVCHEYGVPLLLNG-AYTVGRMPVSGKELGAD 193 (361)
T ss_pred CCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeeeccHHHHHHHHHHcCCeEEEEC-CcccCCcCCCHHHcCCC
Confidence 2333 33 37899999998 569999999999999999999999943 4455543 344578999
Q ss_pred EEEecC-ccccccCCCCCCceEEEEEchhHHhcCCCceeeeeecCCCCcceeeecccccccccccccCCCccchhHHHHH
Q 001586 351 IVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLAN 429 (1049)
Q Consensus 351 ivvgs~-k~lg~P~~~GGP~~G~l~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irrekaTsni~t~~~l~a~ 429 (1049)
++++|. |.|+.| +++|++++++++.+++--.. .+ |.+. + .....+|++. .+.+++
T Consensus 194 ~~~~s~~K~l~~~-----~~~G~l~~~~~~~~~l~~~~---------~~-~~~~-----~-~~~~~~~~~~---~~~~~~ 249 (361)
T cd06452 194 FIVGSGHKSMAAS-----APIGVLATTEEWADIVFRTS---------QM-FKIK-----E-VELLGCTLRG---APLVTL 249 (361)
T ss_pred EEEecCCccccCC-----CCeEEEEECHHHHHHHhccc---------cc-cccc-----e-eeeeccccCc---hHHHHH
Confidence 999998 767533 35789999988877652100 00 1110 0 0001123222 233344
Q ss_pred HHHHHHHHhCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEcCC--CCcceEEEecCC-----------HHHHHHHHHHcC
Q 001586 430 MAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL--PFFDTVKVKCAD-----------AHAIASAAYKIE 496 (1049)
Q Consensus 430 ~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~g~~~v~~~--~~~~~v~i~~~~-----------~~~v~~~L~~~g 496 (1049)
++++ .+. .+-++. ..+..+++++++++|+++.|++++.. ...+-+.+..+. +.++.+.|.++|
T Consensus 250 ~~al--~~~-~~~~~~-~~~~~~~~~~l~~~L~~l~g~~v~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g 325 (361)
T cd06452 250 MASF--PHV-KERVKR-WDEEVEKARWFVAELEKIEGIKQLGEKPKNHDLMFFETPSFDEIAKKHKRRGYFLYSELKKRG 325 (361)
T ss_pred HHHH--HHH-HHHHHH-HHHHHHHHHHHHHHHhcCCCeEEECCCCCCCceEEEEcCCcchhhhhccccchhHHHHHHHcC
Confidence 4444 111 122333 34445677899999999833998732 111223333321 336999999999
Q ss_pred Ceeeeec-CCeEEEEeccCCCHHHHHHHHHHHh
Q 001586 497 MNLRVVD-SNTVTASFDETTTLEDVDKLFIVFA 528 (1049)
Q Consensus 497 I~~~~~~-~~~vris~~~~~t~edid~lv~aL~ 528 (1049)
|.+.... ...+|++. ...|++|++.|+++|+
T Consensus 326 I~~~~~~~~~~~ri~~-~g~~~e~~~~l~~al~ 357 (361)
T cd06452 326 IHGIKPGLTRYFKLST-YGLTWEQVEYVVDAFK 357 (361)
T ss_pred ceEEcCCCceEEEEEe-cCCCHHHHHHHHHHHH
Confidence 9853322 34678877 3479999999999996
No 153
>PRK15029 arginine decarboxylase; Provisional
Probab=99.73 E-value=2.8e-16 Score=192.62 Aligned_cols=278 Identities=13% Similarity=0.064 Sum_probs=194.5
Q ss_pred HHHHHHHHHHHHHhCCCCcceEeccchHHHHHHHHHHhhhccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc--
Q 001586 211 ESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL-- 288 (1049)
Q Consensus 211 e~l~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a~~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~~-- 288 (1049)
..+.|+|+..|+++|++.+.+ +++|+|.++.|++++.. . +||+|||++++|.|+...+.. .|.+.+++++
T Consensus 205 G~I~eAq~~aA~~fgA~~t~F-lvNGST~gn~a~i~a~~-~--~gd~Vlv~RN~HKSv~~al~L----~ga~Pvyl~P~~ 276 (755)
T PRK15029 205 GAFGESEKYAARVFGADRSWS-VVVGTSGSNRTIMQACM-T--DNDVVVVDRNCHKSIEQGLIL----TGAKPVYMVPSR 276 (755)
T ss_pred cHHHHHHHHHHHHhCCCcEEE-EeCChhHHHHHHHHHhc-C--CCCEEEeecccHHHHHHHHHH----cCCeEEEecccc
Confidence 368899999999999987655 77889999999888753 3 899999999999999998743 4788887753
Q ss_pred ----------------chhhc-c--CCCEe--------EEEEEcCCCCeeeccHHHHHHHHHhCCcEEEEE----ecccc
Q 001586 289 ----------------KDIDY-K--SGDVC--------GVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMA----TDLLA 337 (1049)
Q Consensus 289 ----------------~~l~~-l--~~~t~--------~V~v~~pn~~G~i~di~~I~~~ah~~galliV~----a~~~a 337 (1049)
+++++ + .++++ +|++++|||+|.+.|+++|+++||++|.+++|+ +++.-
T Consensus 277 ~~~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PTY~Gv~~di~~I~~~~h~~~~~llvDEAhGah~~F 356 (755)
T PRK15029 277 NRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTYDGVCYNAKEAQDLLEKTSDRLHFDEAWYGYARF 356 (755)
T ss_pred cccCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCCCcceeeCHHHHHHHHHhcCCeEEEECcccccccc
Confidence 23333 2 23444 899999999999999999999999999999993 33211
Q ss_pred ccCCC--CCC-----c-ccce-EEEecC-ccccccCCCCCCceEEEEEchhHHhcCCCceeeeeecCCCCcceeeecccc
Q 001586 338 LTILK--PPG-----E-LGAD-IVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTR 407 (1049)
Q Consensus 338 lg~l~--~p~-----~-~GaD-ivvgs~-k~lg~P~~~GGP~~G~l~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtr 407 (1049)
...+. .+- . .||| +|+.|. |.++. +. +++++.++.. .+.+.
T Consensus 357 ~~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL~a-lT----QaS~LHv~~~-~~~id----------------------- 407 (755)
T PRK15029 357 NPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNA-LS----QASYIHVREG-RGAIN----------------------- 407 (755)
T ss_pred CccccccccccccccccCCCceEEEEchhhcccc-hh----hhhhheeCCC-ccccC-----------------------
Confidence 12222 111 3 7999 899999 66643 22 4567776543 01111
Q ss_pred cccccccccCCCccchhHHHHHHHHHH-HH-HhCc-chHHHHHHHHHHHHHHHHHHhhcCCC------------------
Q 001586 408 EQHIRRDKATSNICTAQALLANMAAMY-AV-YHGP-EGLKTIAQRVHGLAGTFALGLKKLGT------------------ 466 (1049)
Q Consensus 408 eq~irrekaTsni~t~~~l~a~~aa~y-~~-~~g~-~Gl~~ia~~~~~~a~~l~~~L~~~g~------------------ 466 (1049)
+-|...+-.-..|+++.|.++|++- +. ++-. .| +++.++..+.+..++++|.++.+
T Consensus 408 --~~r~~~~l~~~qSTSPSY~LmASLD~ar~~m~~~~G-~~l~~~~i~~~~~~r~~l~~~~~~~~~~~~~~~~~~~~~~v 484 (755)
T PRK15029 408 --FSRFNQAYMMHATTSPLYAICASNDVAVSMMDGNSG-LSLTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPWNKEVV 484 (755)
T ss_pred --HHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHhhhhh-HHHHHHHHHHHHHHHHHHHhccccccccccccccccCcccc
Confidence 0011122233446689999999982 22 2221 34 45666777788888888877642
Q ss_pred ------------------------eEEcCC--C------------Ccce--EEEecCC----HH---------HHHHHHH
Q 001586 467 ------------------------VEVQGL--P------------FFDT--VKVKCAD----AH---------AIASAAY 493 (1049)
Q Consensus 467 ------------------------~~v~~~--~------------~~~~--v~i~~~~----~~---------~v~~~L~ 493 (1049)
+.++.+ . .+|. ++|.+++ +. ++.+.|.
T Consensus 485 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~lDp~Klti~~~~~g~sG~~~~~gip~~~l~~~L~ 564 (755)
T PRK15029 485 TDPQTGKTYDFADAPTKLLTTVQDCWVMHPGESWHGFKDLPDNWSMLDPIKVSILAPGMGEDGELEETGVPAALVTAWLG 564 (755)
T ss_pred ccccccccccccccchhhhccccceeeecccccccCcccccccccccCCceEEEEcCCCCCCCcccccCCcHHHHHHHHH
Confidence 222211 0 1243 5555432 33 8999998
Q ss_pred HcCCeeeeecCCeEEEEeccCCCHHHHHHHHHHHh
Q 001586 494 KIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFA 528 (1049)
Q Consensus 494 ~~gI~~~~~~~~~vris~~~~~t~edid~lv~aL~ 528 (1049)
++||.++..+...+.+-++..+|++++++|+++|.
T Consensus 565 ~~gI~~E~~~~~~vL~l~s~g~t~~~~~~L~~aL~ 599 (755)
T PRK15029 565 RHGIVPTRTTDFQIMFLFSMGVTRGKWGTLVNTLC 599 (755)
T ss_pred HcCCEEEecCCCeEEEEeCCCCCHHHHHHHHHHHH
Confidence 89999999888999999999999999999999996
No 154
>PRK15029 arginine decarboxylase; Provisional
Probab=99.73 E-value=4.9e-16 Score=190.48 Aligned_cols=305 Identities=13% Similarity=0.106 Sum_probs=196.6
Q ss_pred HHHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCEEEEEcCCCC-
Q 001586 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK- 712 (1049)
Q Consensus 634 i~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~Vv~V~~d~~- 712 (1049)
+.|.|+..++++|.+.+.|..|++++|+.++++++. +++++||+++.+|-+....+.+.|++.++++...+
T Consensus 207 I~eAq~~aA~~fgA~~t~FlvNGST~gn~a~i~a~~--------~~gd~Vlv~RN~HKSv~~al~L~ga~Pvyl~P~~~~ 278 (755)
T PRK15029 207 FGESEKYAARVFGADRSWSVVVGTSGSNRTIMQACM--------TDNDVVVVDRNCHKSIEQGLILTGAKPVYMVPSRNR 278 (755)
T ss_pred HHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHHhc--------CCCCEEEeecccHHHHHHHHHHcCCeEEEecccccc
Confidence 789999999999999988888988889987776643 26789999999999988889999999999975422
Q ss_pred ----CCCC-----HHHHHHHHHhcCCCeE--------EEEEEcCCccccccccHHHHHHHHHHcCCEEEEeccccccccC
Q 001586 713 ----GNIN-----IEELRKAAEANRDNLS--------TLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVG 775 (1049)
Q Consensus 713 ----g~iD-----~~~L~~~i~~~~~~ta--------aV~it~Pn~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~g 775 (1049)
+.++ ++.++++|+++ +..+ ++++++|+|+|+.. |+++|+++||++|++|+||+|+..- .+
T Consensus 279 ~Gi~~~i~~~~~~~e~i~~~l~~~-p~~k~~~~~~~~avvlt~PTY~Gv~~-di~~I~~~~h~~~~~llvDEAhGah-~~ 355 (755)
T PRK15029 279 YGIIGPIYPQEMQPETLQKKISES-PLTKDKAGQKPSYCVVTNCTYDGVCY-NAKEAQDLLEKTSDRLHFDEAWYGY-AR 355 (755)
T ss_pred cCCccCCCccccCHHHHHHHHHhC-chhhhccccCceEEEEECCCCcceee-CHHHHHHHHHhcCCeEEEECccccc-cc
Confidence 4566 99999999876 3344 89999999999998 8999999999999999999997522 12
Q ss_pred cC--CCC---------c-cCCc-EEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCC
Q 001586 776 LT--SPG---------Y-IGAD-VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTI 842 (1049)
Q Consensus 776 l~--~Pg---------~-~GaD-i~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i 842 (1049)
|. -|. . .|+| +++.|.||+++.- -..++|-++.. .+.+.-..+.. .. .....+
T Consensus 356 F~~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL~al-----TQaS~LHv~~~-~~~id~~r~~~-------~l-~~~qST 421 (755)
T PRK15029 356 FNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNAL-----SQASYIHVREG-RGAINFSRFNQ-------AY-MMHATT 421 (755)
T ss_pred cCccccccccccccccccCCCceEEEEchhhcccch-----hhhhhheeCCC-ccccCHHHHHH-------HH-HHHcCC
Confidence 21 111 2 6899 9999999998521 12345555432 00111000000 00 000111
Q ss_pred CccchhhHHHHHHHHHHHHH-HchhhHHHHHHHHHHHHHHHHHHHhccCC------------------------------
Q 001586 843 AAAPWGSALILPISYTYIAM-MGSKGLTEASKIAILNANYMAKRLEKHYP------------------------------ 891 (1049)
Q Consensus 843 ~sa~~g~~~~~~~a~a~l~~-lG~eGl~~~~~~~~~~a~yL~~~L~~~~~------------------------------ 891 (1049)
++ .|...+.+-.|..+|.. .|.+ ..++.++.+..++++|+++..
T Consensus 422 SP-SY~LmASLD~ar~~m~~~~G~~----l~~~~i~~~~~~r~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 496 (755)
T PRK15029 422 SP-LYAICASNDVAVSMMDGNSGLS----LTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPWNKEVVTDPQTGKTYDFA 496 (755)
T ss_pred Cc-HHHHHHHHHHHHHHHhhhhhHH----HHHHHHHHHHHHHHHHHhccccccccccccccccCcccccccccccccccc
Confidence 21 12222222334444443 3333 344556667777777754311
Q ss_pred --------------eeeccCC--C-------c---eeeEEEEeccCc-----cccCCCCHHHHHHHHHHCCcccCCCCCC
Q 001586 892 --------------ILFRGVN--G-------T---VAHEFIVDLRGL-----KNTAGIEPEDVAKRLMDYGFHGPTMSWP 940 (1049)
Q Consensus 892 --------------v~~~g~~--g-------~---~~~e~iv~~~~~-----~~~~g~~~~~v~k~L~~~Gi~~~~~~~p 940 (1049)
++.++.. | . -..-+++.++.. ..+.|+++..+.+.|.++||.+-...
T Consensus 497 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~lDp~Klti~~~~~g~sG~~~~~gip~~~l~~~L~~~gI~~E~~~-- 574 (755)
T PRK15029 497 DAPTKLLTTVQDCWVMHPGESWHGFKDLPDNWSMLDPIKVSILAPGMGEDGELEETGVPAALVTAWLGRHGIVPTRTT-- 574 (755)
T ss_pred ccchhhhccccceeeecccccccCcccccccccccCCceEEEEcCCCCCCCcccccCCcHHHHHHHHHHcCCEEEecC--
Confidence 0100000 0 0 001122333211 11235566699999988999975443
Q ss_pred CCCEEEEEccCCCCHHHHHHHHHHHHHHHHH
Q 001586 941 VPGTLMIEPTESESKEELDRYCDALISIREE 971 (1049)
Q Consensus 941 ~~~~lri~~t~~~t~eeid~fv~aL~~i~~~ 971 (1049)
..++.+-++...+++++++++++|.++.+.
T Consensus 575 -~~~vL~l~s~g~t~~~~~~L~~aL~~~~~~ 604 (755)
T PRK15029 575 -DFQIMFLFSMGVTRGKWGTLVNTLCSFKRH 604 (755)
T ss_pred -CCeEEEEeCCCCCHHHHHHHHHHHHHHHHh
Confidence 367788888899999999999999988553
No 155
>PLN02483 serine palmitoyltransferase
Probab=99.72 E-value=1.6e-15 Score=181.65 Aligned_cols=314 Identities=16% Similarity=0.210 Sum_probs=200.4
Q ss_pred ccccccCCCCCCCCCcHHHHHHHHhCCccccccCCChhhHhhhHHHHHHHHHHHHHHHhCCCCcceEeccchHHHHHHHH
Q 001586 166 VYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMA 245 (1049)
Q Consensus 166 ~~~~~lG~g~y~~~~p~~i~~~~~~~~~~~t~ytpyq~e~sqg~le~l~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~ 245 (1049)
...||||.+-.+...++.+.+.+.. |.+. ...+....|+...+.++++.+|+++|.+. +.++.+|+++..+++
T Consensus 106 ~s~~YLgl~~~~~~~~~~~~~ai~~---~g~~--~~~sr~~~g~~~~~~ele~~lA~~~g~~~--ai~~~~G~~an~~~i 178 (489)
T PLN02483 106 GSYNYLGFAAADEYCTPRVIESLKK---YSAS--TCSSRVDGGTTKLHRELEELVARFVGKPA--AIVFGMGYATNSTII 178 (489)
T ss_pred ecCCccCcCCCCHHHHHHHHHHHHH---hCCC--CCccccccCCcHHHHHHHHHHHHHhCCCc--EEEECCHHHHHHHHH
Confidence 3457999986443344444444433 2222 12334456777889999999999999765 556677766655444
Q ss_pred HHhhhccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc---chhhc-c-------CCCE-----eEEEEEcC--C
Q 001586 246 MCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---KDIDY-K-------SGDV-----CGVLVQYP--G 307 (1049)
Q Consensus 246 ~a~~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~~---~~l~~-l-------~~~t-----~~V~v~~p--n 307 (1049)
.++ . ++||+|++++..|+++...++ ..|++++.++. +++++ + .++| +.+++..+ |
T Consensus 179 ~al-~--~~Gd~Vi~d~~~h~s~~~~~~----~~Ga~v~~~~~~d~~~le~~l~~~i~~~~p~t~~p~~k~livve~v~s 251 (489)
T PLN02483 179 PAL-I--GKGGLIISDSLNHNSIVNGAR----GSGATIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIIVIVEGIYS 251 (489)
T ss_pred HHh-C--CCCCEEEEcchhhHHHHHHHH----HcCCeEEEEeCCCHHHHHHHHHhhhhccccccccCCceEEEEECCCCC
Confidence 443 2 389999999999999988764 35888887754 34433 2 1333 44555443 7
Q ss_pred CCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCC----------CcccceEEEecC-ccccccCCCCCCceEEEEEc
Q 001586 308 TEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPP----------GELGADIVVGSA-QRFGVPMGYGGPHAAFLATS 376 (1049)
Q Consensus 308 ~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~p----------~~~GaDivvgs~-k~lg~P~~~GGP~~G~l~~~ 376 (1049)
+.|.+.|+++|+++|+++|++++++ +.++++.+.+. ...++||+++|. |.|+.+ | |+++++
T Consensus 252 ~~G~~~~l~~I~~la~~~~~~livD-Ea~s~g~~G~~G~g~~~~~~v~~~~~dI~~~SfSKs~g~~---G----G~i~~~ 323 (489)
T PLN02483 252 MEGELCKLPEIVAVCKKYKAYVYLD-EAHSIGAVGKTGRGVCELLGVDPADVDIMMGTFTKSFGSC---G----GYIAGS 323 (489)
T ss_pred CCCcccCHHHHHHHHHHcCCEEEEE-CcCccCccCCCCCchHHhcCCCcccCcEEEEecchhcccC---c----eEEEcC
Confidence 8999999999999999999999994 44554433211 124679999997 888631 2 789888
Q ss_pred hhHHhcCCCceeeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHH-hCcch---HHHHHHHHHH
Q 001586 377 QEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVY-HGPEG---LKTIAQRVHG 452 (1049)
Q Consensus 377 ~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irrekaTsni~t~~~l~a~~aa~y~~~-~g~~G---l~~ia~~~~~ 452 (1049)
+++++.+.... +++. ..+ .+++....+..+++ .+ .+.+| .++..++..+
T Consensus 324 ~~li~~l~~~~----------~~~~------------~~~---~~~p~~~~~~~aaL--~~l~~~~g~~~~~~~~~~l~~ 376 (489)
T PLN02483 324 KELIQYLKRTC----------PAHL------------YAT---SMSPPAVQQVISAI--KVILGEDGTNRGAQKLAQIRE 376 (489)
T ss_pred HHHHHHHHHhC----------cccc------------ccC---CcCHHHHHHHHHHH--HHHHhCccccchHHHHHHHHH
Confidence 88776652100 0000 000 11112222223333 22 22222 2345677889
Q ss_pred HHHHHHHHhhcCCCeEEcCCCCcceEEEecC--C-HHHHHHHHHHcCCeeeee-------cCCeEEEEeccCCCHHHHHH
Q 001586 453 LAGTFALGLKKLGTVEVQGLPFFDTVKVKCA--D-AHAIASAAYKIEMNLRVV-------DSNTVTASFDETTTLEDVDK 522 (1049)
Q Consensus 453 ~a~~l~~~L~~~g~~~v~~~~~~~~v~i~~~--~-~~~v~~~L~~~gI~~~~~-------~~~~vris~~~~~t~edid~ 522 (1049)
+.+++++.|+++| +.+........+.+.+. . ..++.++|.++||.+... ..+.+|+|++..+|+||||+
T Consensus 377 ~~~~l~~~L~~~G-~~v~~~~~sp~~~l~l~~~~~~~~~~~~Ll~~GI~v~~~~fp~~p~~~~~vRi~isa~~t~edId~ 455 (489)
T PLN02483 377 NSNFFRSELQKMG-FEVLGDNDSPVMPIMLYNPAKIPAFSRECLKQNVAVVVVGFPATPLLLARARICISASHSREDLIK 455 (489)
T ss_pred HHHHHHHHHHHCC-CcccCCCCCCEEEEEECCHHHHHHHHHHHHHCCcEEeeeCCCCCCCCCceEEEEeCCCCCHHHHHH
Confidence 9999999999987 87764221112222222 2 568889999999987532 12679999999999999999
Q ss_pred HHHHHhC
Q 001586 523 LFIVFAG 529 (1049)
Q Consensus 523 lv~aL~~ 529 (1049)
++++|..
T Consensus 456 ~l~~L~~ 462 (489)
T PLN02483 456 ALEVISE 462 (489)
T ss_pred HHHHHHH
Confidence 9999963
No 156
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.72 E-value=8.8e-16 Score=179.40 Aligned_cols=296 Identities=17% Similarity=0.217 Sum_probs=193.5
Q ss_pred hhcHHHHHHHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCEEEE
Q 001586 627 AQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVS 706 (1049)
Q Consensus 627 ~~G~~~~i~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~Vv~ 706 (1049)
.+|..++..++++++++++|.+. .+..++|+++..+++.++ . +++++|+++...|..+...+...|.+++.
T Consensus 82 ~~G~~~l~~~l~~~la~~~g~~~-~i~~tsG~~a~~~~~~~l---~-----~~gd~vi~~~~~~~~~~~~~~~~~~~~~~ 152 (397)
T PRK06939 82 ICGTQDLHKELEEKLAKFLGTED-AILYSSCFDANGGLFETL---L-----GKEDAIISDALNHASIIDGVRLCKAKRYR 152 (397)
T ss_pred ccCCcHHHHHHHHHHHHHhCCCc-EEEEcChHHHHHHHHHHh---C-----CCCCEEEEEhhhhHHHHHHHHhcCCceEE
Confidence 35666778889999999999764 456667776665444332 1 25789999988877666667888999888
Q ss_pred EcCCCCCCCCHHHHHHHHHhc---CCCeEEEEEEcC-CccccccccHHHHHHHHHHcCCEEEEeccccccccCcC-C---
Q 001586 707 VGTDAKGNINIEELRKAAEAN---RDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT-S--- 778 (1049)
Q Consensus 707 V~~d~~g~iD~~~L~~~i~~~---~~~taaV~it~P-n~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~-~--- 778 (1049)
++. .|+++|+++++++ ..++++|++... +.+|.++ ++++|.++|+++|+++++|+++..+..+.. .
T Consensus 153 ~~~-----~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~~G~~~-~~~~l~~la~~~~~~li~De~~~~g~~~~~~~~~~ 226 (397)
T PRK06939 153 YAN-----NDMADLEAQLKEAKEAGARHKLIATDGVFSMDGDIA-PLPEICDLADKYDALVMVDDSHAVGFVGENGRGTV 226 (397)
T ss_pred eCC-----CCHHHHHHHHHhhhccCCCCeEEEEecCcCCCCCcC-CHHHHHHHHHHhCCEEEEECcccccCcCCCCCCHH
Confidence 775 5899999998742 226777776644 4579887 799999999999999999998742221111 0
Q ss_pred --CC-ccCCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHH
Q 001586 779 --PG-YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPI 855 (1049)
Q Consensus 779 --Pg-~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~ 855 (1049)
.+ ..+.|+++.++||+|+ |+.+|++++++++.+.+.... .....++.. ....+.+
T Consensus 227 ~~~~~~~~~~i~~~S~sK~~~------g~r~G~v~~~~~~~~~l~~~~-----------~~~~~~~~~-----~~~~~~a 284 (397)
T PRK06939 227 EHFGVMDRVDIITGTLGKALG------GASGGYTAGRKEVIDWLRQRS-----------RPYLFSNSL-----APAIVAA 284 (397)
T ss_pred HHcCCCCCCcEEEEECHHHhC------ccCceEEEeCHHHHHHHHHhC-----------ccccccCCC-----CHHHHHH
Confidence 01 1257899999999983 456799998876655432100 000001111 1111222
Q ss_pred HHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHHHCCccc
Q 001586 856 SYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHG 934 (1049)
Q Consensus 856 a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~-~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~~ 934 (1049)
+.+.+..+. ++ .+..++..++.+++.+.|++. +++. .+.+.. +.+.++ .+.+..+++++|.++||.+
T Consensus 285 ~~~al~~~~-~~-~~~~~~~~~~~~~l~~~L~~~~~~~~--~~~~~~---~~~~~~-----~~~~~~~~~~~L~~~gI~v 352 (397)
T PRK06939 285 SIKVLELLE-ES-DELRDRLWENARYFREGMTAAGFTLG--PGEHPI---IPVMLG-----DAKLAQEFADRLLEEGVYV 352 (397)
T ss_pred HHHHHHHHh-cC-HHHHHHHHHHHHHHHHHHHHcCCCcC--CCCCCE---EEEEEC-----CHHHHHHHHHHHHHCCceE
Confidence 333444442 21 345566677889999999875 4332 111222 222222 1134678999999999987
Q ss_pred CCCCCCC----CCEEEEEccCCCCHHHHHHHHHHHHHHHHH
Q 001586 935 PTMSWPV----PGTLMIEPTESESKEELDRYCDALISIREE 971 (1049)
Q Consensus 935 ~~~~~p~----~~~lri~~t~~~t~eeid~fv~aL~~i~~~ 971 (1049)
....||. .+.+|++++..++++||+++++.|++++++
T Consensus 353 ~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~l~~L~~~~~~ 393 (397)
T PRK06939 353 IGFSFPVVPKGQARIRTQMSAAHTKEQLDRAIDAFEKVGKE 393 (397)
T ss_pred eeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHH
Confidence 5433432 367999999889999999999999988755
No 157
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.72 E-value=6.3e-16 Score=181.87 Aligned_cols=276 Identities=14% Similarity=0.141 Sum_probs=177.7
Q ss_pred hHHHHHHHHHHHHHHHhCCCCcceEeccchHHHHHHHHHHhhhccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeC
Q 001586 208 GRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSD 287 (1049)
Q Consensus 208 g~le~l~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a~~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~ 287 (1049)
|..+...++++.+|+++|.+. ..++.+|+.+.++++.++.. ..+++.|+++...|.++...++ ..|.++..++
T Consensus 88 ~~~~~~~~Le~~la~~~g~~~--~i~~~sG~~a~~~~i~~l~~-~~~g~~vi~~~~~h~s~~~~~~----~~g~~~~~~~ 160 (410)
T PRK13392 88 GTSHPHVLLERELADLHGKES--ALLFTSGYVSNDAALSTLGK-LLPGCVILSDALNHASMIEGIR----RSGAEKQVFR 160 (410)
T ss_pred cChHHHHHHHHHHHHHhCCCC--EEEECcHHHHHHHHHHHHhc-CCCCCEEEEehhhhHHHHHHHH----HcCCeEEEEe
Confidence 444556788899999999753 56667777666655543221 1267888888889999887664 2466666554
Q ss_pred c---chhhc-c----CCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCC---------cccc
Q 001586 288 L---KDIDY-K----SGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPG---------ELGA 349 (1049)
Q Consensus 288 ~---~~l~~-l----~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~p~---------~~Ga 349 (1049)
. +++++ + ++++++|++.+| |++|.+.|+++|.++|+++|++++|+ +.++++.+.+.+ .-..
T Consensus 161 ~~d~~~l~~~l~~~~~~~t~~v~i~~~~n~tG~~~~l~~i~~l~~~~~~~livD-ea~~~g~~g~~g~g~~~~~~~~~~~ 239 (410)
T PRK13392 161 HNDLADLEEQLASVDPDRPKLIAFESVYSMDGDIAPIEAICDLADRYNALTYVD-EVHAVGLYGARGGGIAERDGLMDRI 239 (410)
T ss_pred CCCHHHHHHHHHhccCCCCEEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEE-CCccccCcCCCCCchhhhccCCCCC
Confidence 3 23333 2 357899999998 78999999999999999999999994 444544432211 1146
Q ss_pred eEEEecC-ccccccCCCCCCceEEEEEchhHHhcCCCceeeeeecCCCCcceeeecccccccccccccCCCccchhHHHH
Q 001586 350 DIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLA 428 (1049)
Q Consensus 350 Divvgs~-k~lg~P~~~GGP~~G~l~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irrekaTsni~t~~~l~a 428 (1049)
|+++++. |.||.+ | |++++++++.+.+--. .+.|.+ |+.. ++....+
T Consensus 240 div~~tlsK~~g~~------G-G~~~~~~~~~~~l~~~----------~~~~~~--------------s~~~-~~~~~~a 287 (410)
T PRK13392 240 DMIQGTLAKAFGCL------G-GYIAASADLIDFVRSF----------APGFIF--------------TTAL-PPAVAAG 287 (410)
T ss_pred cEEEEEChHhhhcc------c-chhhcCHHHHHHHHHh----------Ccchhc--------------cCcC-CHHHHHH
Confidence 8888886 888643 2 6777777765533100 000100 0010 0112233
Q ss_pred HHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEcCCCCcceEEEecCC---HHHHHHHHH-HcCCeeeeec-
Q 001586 429 NMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD---AHAIASAAY-KIEMNLRVVD- 503 (1049)
Q Consensus 429 ~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~g~~~v~~~~~~~~v~i~~~~---~~~v~~~L~-~~gI~~~~~~- 503 (1049)
..+++ ..+... .+..++..++.+++++.|+++| +++..+ ..+-+.+..+. ..++.++|. ++||.++...
T Consensus 288 ~~aaL--~~~~~~--~~~~~~~~~~~~~l~~~L~~~g-~~~~~~-~~~~~~i~~~~~~~~~~~~~~L~~~~GI~v~~~~~ 361 (410)
T PRK13392 288 ATAAI--RHLKTS--QTERDAHQDRVAALKAKLNANG-IPVMPS-PSHIVPVMVGDPTLCKAISDRLMSEHGIYIQPINY 361 (410)
T ss_pred HHHHH--HHHhcC--HHHHHHHHHHHHHHHHHHHHcC-CCCCCC-CCCEEEEEeCCHHHHHHHHHHHHHhCCEEEeeeCC
Confidence 33343 222222 2345677888899999999887 876532 11223333332 568999886 6799886531
Q ss_pred ------CCeEEEEeccCCCHHHHHHHHHHHhC
Q 001586 504 ------SNTVTASFDETTTLEDVDKLFIVFAG 529 (1049)
Q Consensus 504 ------~~~vris~~~~~t~edid~lv~aL~~ 529 (1049)
...+|++++..+|++|+|+++++|..
T Consensus 362 p~~~~~~~~lRis~~~~~t~edid~l~~aL~~ 393 (410)
T PRK13392 362 PTVPRGTERLRITPTPLHDDEDIDALVAALVA 393 (410)
T ss_pred CCCCCCCceEEEEECCCCCHHHHHHHHHHHHH
Confidence 25799999999999999999999963
No 158
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.72 E-value=3.2e-15 Score=177.19 Aligned_cols=305 Identities=14% Similarity=0.163 Sum_probs=200.6
Q ss_pred HHHHHHHHHHhhCCC-ccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEE-EcCCCCCccHHHHHhcCC---------
Q 001586 634 FNNLGEWLCTITGFD-SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGM--------- 702 (1049)
Q Consensus 634 i~el~~~la~l~G~~-~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VL-ip~saHg~~pa~a~~~G~--------- 702 (1049)
..++.+.|+++++-+ ...++.+||+++++++++.+|.|...+|.++|.+|| ...++||..-.+....|-
T Consensus 99 ~~~lAe~L~~~~p~~~~~v~f~~sGseAve~AlKlA~~~~~~rg~~~r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~~~ 178 (453)
T PRK06943 99 AIELAERLAALTGGTLGHAFFASDGASAVEIALKMSFHAWRNRGRGDKREFVCLANGYHGETIGALGVTDVALFKDAYDP 178 (453)
T ss_pred HHHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcCCCcHHhhcccCChhhhccccc
Confidence 347888899988743 234778999999999999998876556655567777 688899977554332221
Q ss_pred ---EEEEEcCCCC-C-----------CCCHHHHHHHHHhcCCCeEEEEEEc-C-Cccccccc---cHHHHHHHHHHcCCE
Q 001586 703 ---KIVSVGTDAK-G-----------NINIEELRKAAEANRDNLSTLMVTY-P-STHGVYEE---GIDEICKIIHDNGGQ 762 (1049)
Q Consensus 703 ---~Vv~V~~d~~-g-----------~iD~~~L~~~i~~~~~~taaV~it~-P-n~~G~i~~---di~eI~~lah~~G~l 762 (1049)
.+..++.... + .-|++++++.++++.+++++|+++. . ...|++.+ .++++.++|++||++
T Consensus 179 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gil 258 (453)
T PRK06943 179 LIRHAHVVASPDARGARPGETAADVAARALADVRRLFAERAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVH 258 (453)
T ss_pred CCCCCEEECCCCccccccCCCHHHHHHHHHHHHHHHHHhCCCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCCE
Confidence 2334443211 1 1246888888877778999999987 3 44676643 599999999999999
Q ss_pred EEEeccccccccCcCCCCcc--------CCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCC
Q 001586 763 VYMDGANMNAQVGLTSPGYI--------GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPE 834 (1049)
Q Consensus 763 l~vD~A~~~a~~gl~~Pg~~--------GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~ 834 (1049)
+|+|++ +.|+.+.|.+ -+|++++ .|.++ +|--.+|.+++++++.+.+.....
T Consensus 259 lI~DEV----~TG~GRtG~~fa~~~~gv~PDivt~--gKgl~----gG~~Pi~av~~~~ei~~~~~~~~~---------- 318 (453)
T PRK06943 259 LIADEI----AVGCGRTGTFFACEQAGVWPDFLCL--SKGIS----GGYLPLSLVLSRDAIFAAFYDDDV---------- 318 (453)
T ss_pred EEeech----hhCCCCCcchhHHHhCCCCCCeEee--ehhhc----cCcccceEEEEcHHHHHhhcccCc----------
Confidence 999986 5677677643 3799888 48663 342236667778777655421100
Q ss_pred CCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc--CCee--eccCCCceeeEEEEecc
Q 001586 835 KSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPIL--FRGVNGTVAHEFIVDLR 910 (1049)
Q Consensus 835 ~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~--~~v~--~~g~~g~~~~e~iv~~~ 910 (1049)
... ....+++.|+++.++++.+.|..+-++++.+ +..+..++|.++|+++ +..+ ..|. |. +..+-+..+
T Consensus 319 -~~~-~~~~~T~~gnpl~~aaa~a~L~~i~~~~l~~---~~~~~G~~l~~~L~~l~~~~~v~~vrG~-Gl-~~gvel~~~ 391 (453)
T PRK06943 319 -TRG-FLHSHSYTGNPLACRAALATLDLFAEDDVLA---RNARKSARLRAALAPLAAHPQVRHLRQR-GT-IFAFDVALD 391 (453)
T ss_pred -cCC-ccCCCCCCCCHHHHHHHHHHHHHHHhcCHHH---HHHHHHHHHHHHHHHHhcCCCEEeEecc-cc-EEEEEEccC
Confidence 000 0011234567888888999999988776544 4446677888888765 2211 1121 32 222222111
Q ss_pred CccccCCC-CHHHHHHHHHHCCcccCCCCCCCCCEEEEEccCCCCHHHHHHHHHHHHHHHHHH
Q 001586 911 GLKNTAGI-EPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEI 972 (1049)
Q Consensus 911 ~~~~~~g~-~~~~v~k~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~eeid~fv~aL~~i~~~i 972 (1049)
. .... ....+.+++.++|+.+... .+.++++|+...|++|||+++++|.+++.++
T Consensus 392 ~---~~~~~~~~~i~~~~~~~Gll~~~~----g~~l~~~Ppl~it~~eid~~~~~l~~al~~~ 447 (453)
T PRK06943 392 G---DAARTFSRRFFEAALERELLLRPI----GTTVYLMPPYVLDDDEIAWLAERTRATLDAT 447 (453)
T ss_pred C---CcchHHHHHHHHHHHHCCcEEEec----CCEEEEeCCCcCCHHHHHHHHHHHHHHHHHH
Confidence 0 0011 1356788889999987432 3679999999999999999999999988775
No 159
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.72 E-value=9.1e-16 Score=178.42 Aligned_cols=290 Identities=14% Similarity=0.146 Sum_probs=186.4
Q ss_pred cHHHHHHHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCEEEEEc
Q 001586 629 GYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVG 708 (1049)
Q Consensus 629 G~~~~i~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~Vv~V~ 708 (1049)
|......++++.+++++|.+. .+..++|+++.++ +++.+. .++++|+++...|+.+...+.+.|.+++.++
T Consensus 81 g~~~~~~~l~~~la~~~~~~~-~i~~~~g~~~~~~---~l~~~~-----~~gd~V~~~~~~~~~~~~~~~~~g~~~~~~~ 151 (385)
T PRK05958 81 GNSPAHEALEEELAEWFGAER-ALLFSSGYAANLA---VLTALA-----GKGDLIVSDKLNHASLIDGARLSRARVRRYP 151 (385)
T ss_pred CCcHHHHHHHHHHHHHhCCCc-EEEECcHHHHHHH---HHHHhC-----CCCCEEEEeCccCHHHHHHHHhcCCceEEeC
Confidence 333456788999999999654 4556677765533 333321 2568899998888777777788999999888
Q ss_pred CCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-ccccccccHHHHHHHHHHcCCEEEEeccccccccCcC---CC-----
Q 001586 709 TDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT---SP----- 779 (1049)
Q Consensus 709 ~d~~g~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~---~P----- 779 (1049)
. .|+++++++++..+++++++++..++ .+|... ++++|+++|+++|+++++|+++.....+.. .+
T Consensus 152 ~-----~d~~~l~~~i~~~~~~~~lvi~~~~~~~~G~~~-~l~~i~~ia~~~~~~li~De~~~~g~~~~~g~~~~~~~~~ 225 (385)
T PRK05958 152 H-----NDVDALEALLAKWRAGRALIVTESVFSMDGDLA-PLAELVALARRHGAWLLVDEAHGTGVLGPQGRGLAAEAGL 225 (385)
T ss_pred C-----CCHHHHHHHHHhccCCCeEEEEEecccCCCCcC-CHHHHHHHHHHhCCEEEEECcccccccCCCCCchHHhhCC
Confidence 6 48999999997432346666666664 589887 799999999999999999999743321100 00
Q ss_pred CccCCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHH
Q 001586 780 GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTY 859 (1049)
Q Consensus 780 g~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~ 859 (1049)
....-+++..++||+|+. +| |++..++++.+.+.... +....+. .. +...++++++.
T Consensus 226 ~~~~~~i~~~s~sK~~~~------~G-g~~~~~~~~~~~~~~~~-----------~~~~~~~-~~----~~~~~aa~~aa 282 (385)
T PRK05958 226 AGEPDVILVGTLGKALGS------SG-AAVLGSETLIDYLINRA-----------RPFIFTT-AL----PPAQAAAARAA 282 (385)
T ss_pred CCCCceEEEEechhhccc------CC-cEEEcCHHHHHHHHHhC-----------ccceecC-CC----CHHHHHHHHHH
Confidence 011234778889999852 33 67777766554321000 0000000 01 12223334445
Q ss_pred HHHHchhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHHHCCcccCCCC
Q 001586 860 IAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMS 938 (1049)
Q Consensus 860 l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~-~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~ 938 (1049)
+..+... .+..++..++.+++.+.|++. +++. .+.+.+ +.+.++. ..+..++.++|.++||.+....
T Consensus 283 l~~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~--~~~~~~---~~~~~~~-----~~~~~~~~~~l~~~gI~v~~~~ 350 (385)
T PRK05958 283 LRILRRE--PERRERLAALIARLRAGLRALGFQLM--DSQSAI---QPLIVGD-----NERALALAAALQEQGFWVGAIR 350 (385)
T ss_pred HHHHhcC--HHHHHHHHHHHHHHHHHHHHcCCCcC--CCCCCE---EEEEeCC-----HHHHHHHHHHHHHCCceEeccc
Confidence 5544322 345667778889999999875 4432 222222 3344431 1345689999999999985432
Q ss_pred CC----CCCEEEEEccCCCCHHHHHHHHHHHHHH
Q 001586 939 WP----VPGTLMIEPTESESKEELDRYCDALISI 968 (1049)
Q Consensus 939 ~p----~~~~lri~~t~~~t~eeid~fv~aL~~i 968 (1049)
.+ -.+++||++...++++|+|++++.|+++
T Consensus 351 ~~~~~~~~~~lRis~~~~~~~~~i~~~l~~l~~~ 384 (385)
T PRK05958 351 PPTVPAGTSRLRITLTAAHTEADIDRLLEALAEA 384 (385)
T ss_pred CCCCCCCCceEEEEecCCCCHHHHHHHHHHHHhc
Confidence 22 1368999999889999999999999875
No 160
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.72 E-value=1.3e-15 Score=176.20 Aligned_cols=297 Identities=15% Similarity=0.122 Sum_probs=192.1
Q ss_pred CcHHHHHHHHhCCccccccCCChhhHhhhHHHHHHHHHHHHHHHhCCCCcceEeccchHHHHHHHHHHhhhccCCCC---
Q 001586 180 VPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKK--- 256 (1049)
Q Consensus 180 ~p~~i~~~~~~~~~~~t~ytpyq~e~sqg~le~l~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a~~~~~~~g~--- 256 (1049)
.|+.+.+.+.+.. ..|+ +.-+...++++.+++++|.+ ++.++.|+|++...+++++. . +||
T Consensus 25 ~~~~v~~a~~~~~---~~~~--------~~~~~~~~~~~~~a~~~g~~--~~~~~~g~t~al~~al~al~-~--~Gd~~~ 88 (363)
T TIGR01437 25 VSDEVADAQKRGA---QNYF--------EIKELVNKTGEYIANLLGVE--DAVIVSSASAGIAQSVAAVI-T--RGNRYL 88 (363)
T ss_pred CCHHHHHHHHHHH---hcCC--------CHHHHHHHHHHHHHHhhCCC--eEEEEcCHHHHHHHHHHHHh-c--CCCcch
Confidence 6777766666532 2232 12355678889999999986 47899999998888777652 3 555
Q ss_pred ------------EEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc------chhhc-cCCCEeEEE-EEc-CCCCeeeccH
Q 001586 257 ------------TFIIASNCHPQTIDICITRADGFDIKVVVSDL------KDIDY-KSGDVCGVL-VQY-PGTEGEVLDY 315 (1049)
Q Consensus 257 ------------~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~~------~~l~~-l~~~t~~V~-v~~-pn~~G~i~di 315 (1049)
+||++...++.+...+...+...|.++++++. +++++ ++++|++++ +++ +|++|.+.|+
T Consensus 89 ~~~~~~s~~~~~eVi~~~~~~~~~~~~~~~~~~~~g~~~v~v~~~~~~d~~~le~ai~~~t~ai~~v~~~~~~~g~~~~~ 168 (363)
T TIGR01437 89 VENLHDSKIEVNEVVLPKGHNVDYGAPVETMVRLGGGKVVEAGYANECSAEQLEAAITEKTAAILYIKSHHCVQKSMLSV 168 (363)
T ss_pred hhcccccccccceEEEECccchhcCCchHHHHHhcCCeEEEEcCCCCCCHHHHHHhcChhceEEEEEecCCCCcCCcCCH
Confidence 77777633333221222223446888887653 56766 888999776 566 4889999999
Q ss_pred HHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCCCCCceEEEEEchhHHhcCCCceeeeeecC
Q 001586 316 GDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDS 394 (1049)
Q Consensus 316 ~~I~~~ah~~galliV~a~~~alg~l~~p~~~GaDivvgs~-k~lg~P~~~GGP~~G~l~~~~~l~~~lpgrivG~s~d~ 394 (1049)
++|+++||++|++++++. ..+. .+..+.++|+|++++|+ |+|+ ||..|+++.++++++.+.....|
T Consensus 169 ~~i~~~a~~~gi~vivD~-a~~~-~~~~~~~~g~D~~~~S~~K~l~------gp~~G~l~~~~~~i~~~~~~~~~----- 235 (363)
T TIGR01437 169 EDAAQVAQEHNLPLIVDA-AAEE-DLQKYYRLGADLVIYSGAKAIE------GPTSGLVLGKKKYIEWVKLQSKG----- 235 (363)
T ss_pred HHHHHHHHHcCCeEEEEC-CCCC-chHHHHHcCCCEEEEeCCcccC------CCceEEEEEcHHHHHHHHhccCC-----
Confidence 999999999999999943 2221 11223568999999998 6564 45678888888777655321111
Q ss_pred CCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEcCC--
Q 001586 395 SGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL-- 472 (1049)
Q Consensus 395 ~g~~~~~l~lqtreq~irrekaTsni~t~~~l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~g~~~v~~~-- 472 (1049)
..+. .+.+|. .+.++.+++ .++...|.+.+.++.. ++.+++++|++++|+++...
T Consensus 236 -~~~~-------------~~~~~~------~~~gl~aAl--~~~~~~~~~~~~~~~~-~~~~l~~~L~~i~g~~~~~~~~ 292 (363)
T TIGR01437 236 -IGRA-------------MKVGKE------NILGLTAAL--EQYLSTGKESGAEMVA-KLTPFIEALNTLKGVSASIVQD 292 (363)
T ss_pred -Ccce-------------eccCHH------HHHHHHHHH--HHHHccCcccHHHHHH-HHHHHHHHHhcCCCeEEEEecC
Confidence 0010 112222 244555555 3333334444444443 46689999999855887621
Q ss_pred -C--Ccc--eEEEecC--C--HHHHHHHHHHcC--Ceeeee--cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001586 473 -P--FFD--TVKVKCA--D--AHAIASAAYKIE--MNLRVV--DSNTVTASFDETTTLEDVDKLFIVFAG 529 (1049)
Q Consensus 473 -~--~~~--~v~i~~~--~--~~~v~~~L~~~g--I~~~~~--~~~~vris~~~~~t~edid~lv~aL~~ 529 (1049)
. .++ .++|+.. + ..++.++|.++| |..+.. ..+.+++++.. ++++|+|+++++|..
T Consensus 293 ~~~~~~~~~~v~~~~~~~g~~~~~l~~~L~~~~~~I~~r~~~~~~~~~~l~~~~-~~~~e~~~~~~~l~~ 361 (363)
T TIGR01437 293 EAGRDIARAEIRFDESELGMTAADVVQALRQGEPAIYTRGYKANEGIIEIDPRS-VTGGQLDIIVERIRE 361 (363)
T ss_pred CCCCcCceEEEEEeccCCCCCHHHHHHHHhcCCCCEEEeeeeecCCeEEEEeec-CCHHHHHHHHHHHHH
Confidence 1 122 2455542 2 789999998877 566542 46889999985 559999999999963
No 161
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.72 E-value=2.9e-15 Score=171.00 Aligned_cols=305 Identities=17% Similarity=0.163 Sum_probs=197.6
Q ss_pred cCCCCCCCCCcHHHHHHHHh--CCccccccCCChhhHhhhHHHHHHHHHHHHHHHhCCC------CcceEeccchHHHHH
Q 001586 171 IGMGYYNTHVPPVILRNIME--NPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLP------MSNASLLDEGTAAAE 242 (1049)
Q Consensus 171 lG~g~y~~~~p~~i~~~~~~--~~~~~t~ytpyq~e~sqg~le~l~e~q~~ia~L~G~~------~~n~sl~~~~Ta~~e 242 (1049)
++.|.||...++.+...+.. .......|.+ .+|. .++++.++++++.. ..++.+++++|++..
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~----~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~t~a~~ 73 (350)
T cd00609 3 LSIGEPDFPPPPEVLEALAAAALRAGLLGYYP-----DPGL----PELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALS 73 (350)
T ss_pred CCCCCCCCCCCHHHHHHHHHHhhccCCCCCCC-----CCCc----HHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHH
Confidence 36677787766666544443 2222222222 2232 33445566666544 567888899998887
Q ss_pred HHHHHhhhccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCcc----------hhhc-cCCCEeEEEEEcC-CCCe
Q 001586 243 AMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK----------DIDY-KSGDVCGVLVQYP-GTEG 310 (1049)
Q Consensus 243 A~~~a~~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~~~----------~l~~-l~~~t~~V~v~~p-n~~G 310 (1049)
+++.++. +++++|++++..|+++...++. .|++++.++.+ +++. .++++++|++++| |++|
T Consensus 74 ~~~~~~~---~~g~~vl~~~~~~~~~~~~~~~----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~tG 146 (350)
T cd00609 74 LLLRALL---NPGDEVLVPDPTYPGYEAAARL----AGAEVVPVPLDEEGGFLLDLELLEAAKTPKTKLLYLNNPNNPTG 146 (350)
T ss_pred HHHHHhC---CCCCEEEEcCCCchhHHHHHHH----CCCEEEEEecccccCCccCHHHHHhhcCccceEEEEECCCCCCC
Confidence 7666552 3789999999999998887753 57888777653 1222 5678999999988 6899
Q ss_pred eeccHHHH---HHHHHhCCcEEEEEeccccccC--------CCCCCcccceEEEecC-ccccccCCCCCCceEEEEEch-
Q 001586 311 EVLDYGDF---IKNAHANGVKVVMATDLLALTI--------LKPPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQ- 377 (1049)
Q Consensus 311 ~i~di~~I---~~~ah~~galliV~a~~~alg~--------l~~p~~~GaDivvgs~-k~lg~P~~~GGP~~G~l~~~~- 377 (1049)
.+.|++++ .++||++|++++|+. .++.+. +..+..++.|++++|. |.|+ .+|+.+|++++++
T Consensus 147 ~~~~~~~l~~l~~~~~~~~~~~ivD~-a~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~----~~g~~~G~i~~~~~ 221 (350)
T cd00609 147 AVLSEEELEELAELAKKHGILIISDE-AYAELVYDGEPPPALALLDAYERVIVLRSFSKTFG----LPGLRIGYLIAPPE 221 (350)
T ss_pred cccCHHHHHHHHHHHHhCCeEEEEec-chhhceeCCcccccccCcCccCcEEEEeecccccC----CcccceEEEecCHH
Confidence 99876555 589999999999943 222111 1234677899999998 7774 2466789999998
Q ss_pred hHHhcCCCceeeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHH
Q 001586 378 EYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTF 457 (1049)
Q Consensus 378 ~l~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irrekaTsni~t~~~l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l 457 (1049)
++.+.+.... + ..+++.++ ....++.+++ ... .++++++.+++.++++++
T Consensus 222 ~~~~~~~~~~------------------------~--~~~~~~~~-~~~~~~~~~l--~~~-~~~~~~~~~~~~~~~~~l 271 (350)
T cd00609 222 ELLERLKKLL------------------------P--YTTSGPST-LSQAAAAAAL--DDG-EEHLEELRERYRRRRDAL 271 (350)
T ss_pred HHHHHHHHHH------------------------H--hcccCCCh-HHHHHHHHHH--hCc-HHHHHHHHHHHHHHHHHH
Confidence 6776552100 0 00112111 2222222221 211 168899999999999999
Q ss_pred HHHhhcCCCeEEcCCCCcceEEEecCC---HHHHHHHHHHcCCeeeee------cCCeEEEEeccCCCHHHHHHHHHHHh
Q 001586 458 ALGLKKLGTVEVQGLPFFDTVKVKCAD---AHAIASAAYKIEMNLRVV------DSNTVTASFDETTTLEDVDKLFIVFA 528 (1049)
Q Consensus 458 ~~~L~~~g~~~v~~~~~~~~v~i~~~~---~~~v~~~L~~~gI~~~~~------~~~~vris~~~~~t~edid~lv~aL~ 528 (1049)
.+.|++.+...+........+.+.++. ...+.+.|.++||.+... ....+|++++.. ++||++++++|+
T Consensus 272 ~~~L~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~gi~i~~~~~~~~~~~~~iRi~~~~~--~~~i~~~~~al~ 349 (350)
T cd00609 272 LEALKELGPLVVVKPSGGFFLWLDLPEGDDEEFLERLLLEAGVVVRPGSAFGEGGEGFVRLSFATP--EEELEEALERLA 349 (350)
T ss_pred HHHHHhcCCccccCCCccEEEEEecCCCChHHHHHHHHHhCCEEEecccccccCCCCeEEEEeeCC--HHHHHHHHHHhh
Confidence 999998862332222222234445443 456777777889988653 357899999998 999999999985
No 162
>PRK07678 aminotransferase; Validated
Probab=99.71 E-value=2.5e-15 Score=178.22 Aligned_cols=312 Identities=16% Similarity=0.185 Sum_probs=197.7
Q ss_pred HHHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEE-EcCCCCCccHHHHHhcCC----------
Q 001586 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGM---------- 702 (1049)
Q Consensus 634 i~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VL-ip~saHg~~pa~a~~~G~---------- 702 (1049)
..++.+.|+++++.+...++.+||+++++++++.+|.|...+|.++|.+|| +..+.||....+....|.
T Consensus 91 ~~~lae~l~~~~~~~~~v~f~~sGseA~e~AlklAr~~t~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~ 170 (451)
T PRK07678 91 AIKLAEKLNEWLGGEYVIFFSNSGSEANETAFKIARQYHAQKGEPHRYKFISRYRAYHGNSMGALAATGQAQRKYKYEPL 170 (451)
T ss_pred HHHHHHHHHHhCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhhcCCCcccccccCCC
Confidence 447888999998765445778999999999999999987655654566777 678899987665433221
Q ss_pred --EEEEEcCCCCCC---------CC---HHHHHHHHH-hcCCCeEEEEEEcC-Cccccccc---cHHHHHHHHHHcCCEE
Q 001586 703 --KIVSVGTDAKGN---------IN---IEELRKAAE-ANRDNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGGQV 763 (1049)
Q Consensus 703 --~Vv~V~~d~~g~---------iD---~~~L~~~i~-~~~~~taaV~it~P-n~~G~i~~---di~eI~~lah~~G~ll 763 (1049)
.+..++.....+ .| ++++++.++ .+.+++++|+++.. +..|++.+ .++++.++|++||+++
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~~g~ll 250 (451)
T PRK07678 171 APGFLHVPPPDCYRMPGIESEDIYDLECVKEIDRVMTWELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKHGALL 250 (451)
T ss_pred CCCCEEeCCCccccccccCChHHHHHHHHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEE
Confidence 233344321111 11 234677775 34578999988765 34677653 4999999999999999
Q ss_pred EEeccccccccCcCCCCcc--------CCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCC
Q 001586 764 YMDGANMNAQVGLTSPGYI--------GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEK 835 (1049)
Q Consensus 764 ~vD~A~~~a~~gl~~Pg~~--------GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~ 835 (1049)
|+|++ +.|+.+.|.+ -+|++++ .|.++ +|+-.+|.++++++++..+.....
T Consensus 251 I~DEV----~tGfGRtG~~~~~~~~gv~PDivt~--gK~lg----gG~~Pi~av~~~~~i~~~~~~~~~----------- 309 (451)
T PRK07678 251 ISDEV----ICGFGRTGKAFGFMNYGVKPDIITM--AKGIT----SAYLPLSATAVKKEIYEAFKGKGE----------- 309 (451)
T ss_pred EEeeh----hhcCCcCchhHHHHhcCCCCCEEEe--ecccc----cCCcceeEEEEcHHHHHHHhccCc-----------
Confidence 99987 5566565532 3799887 47663 443236777778777655431100
Q ss_pred CCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc---CCee--eccCCCceeeEEEEecc
Q 001586 836 SQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLR 910 (1049)
Q Consensus 836 ~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~---~~v~--~~g~~g~~~~e~iv~~~ 910 (1049)
.... ...+++.|+++.++++.+.|..+-++++. ++..++.++|.++|++. +.++ ..|. |. +..+.+.-+
T Consensus 310 ~~~~-~h~~T~~gnp~~~aaa~a~l~~l~~~~~~---~~~~~~g~~l~~~l~~~~~~~~~v~~vrg~-Gl-~~~i~~~~~ 383 (451)
T PRK07678 310 YEHF-RHVNTFGGNPAACALALKNLEIMENENLI---ERSAQLGELLLEQLKEELGEHPLVGDIRGK-GL-LVGIELVND 383 (451)
T ss_pred cccc-ccCCCCCcCHHHHHHHHHHHHHHHhCCHH---HHHHHHHHHHHHHHHHHHhcCCCEEEEEee-ce-EEEEEEecC
Confidence 0000 01123456788888889999988777654 34556777888888653 2221 1221 32 222222111
Q ss_pred Ccccc--CCCCHHHHHHHHHHCCcccCCCC--CC-CCCEEEEEccCCCCHHHHHHHHHHHHHHHHHH
Q 001586 911 GLKNT--AGIEPEDVAKRLMDYGFHGPTMS--WP-VPGTLMIEPTESESKEELDRYCDALISIREEI 972 (1049)
Q Consensus 911 ~~~~~--~g~~~~~v~k~L~~~Gi~~~~~~--~p-~~~~lri~~t~~~t~eeid~fv~aL~~i~~~i 972 (1049)
.-... .......+.+.|.++|+.+.... .| -.+.+|++|+..+|++|||+++++|.+++.++
T Consensus 384 ~~~~~~~~~~~a~~i~~~l~~~Gv~~~~~g~~v~~~~~~lrl~Ppl~it~~eid~~~~~l~~~l~~~ 450 (451)
T PRK07678 384 KETKEPADNDKVASVVAACKEKGLIIGKNGDTVAGYNNVLTLSPPLVISSEEIAFIVGTLKTALERI 450 (451)
T ss_pred CcccCcCchHHHHHHHHHHHHCCcEEeecCccccCCCCEEEEECCCcCCHHHHHHHHHHHHHHHHhc
Confidence 00000 00114578888999999874321 01 13789999999999999999999999887653
No 163
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.71 E-value=9.1e-16 Score=180.28 Aligned_cols=311 Identities=14% Similarity=0.141 Sum_probs=192.3
Q ss_pred cccccCCCCCCCCCcHHHHHHHHhCCccccccCCChhhHhhhHHHHHHHHHHHHHHHhCCCCcceEeccchHHHHHHHHH
Q 001586 167 YKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAM 246 (1049)
Q Consensus 167 ~~~~lG~g~y~~~~p~~i~~~~~~~~~~~t~ytpyq~e~sqg~le~l~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~ 246 (1049)
.++|+|...+|..+-+... .+ ++ |.+.. ..+...-|..+...++++.+|+++|.+. +.++++|+.+.++++.
T Consensus 52 sn~ylgl~~~p~v~~a~~~-~~-~~--~~~~~--~~s~~~~~~~~~~~~le~~la~~~g~~~--~~~~~SG~~An~~ai~ 123 (406)
T PRK13393 52 SNDYLGMGQHPAVLAAMHE-AL-DT--CGAGA--GGTRNISGTNHYHVLLEAELADLHGKEA--ALLFTSGYVSNWAALS 123 (406)
T ss_pred cccccCCCCCHHHHHHHHH-HH-HH--cCCCC--cccccccCChHHHHHHHHHHHHHhCCCc--EEEeCCcHHHHHHHHH
Confidence 4567777765544433332 22 22 21211 1122223445567888899999999753 6677788777776654
Q ss_pred HhhhccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeC---cchhhc-c---C-CCEeEEEEEcC-CCCeeeccHHH
Q 001586 247 CNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSD---LKDIDY-K---S-GDVCGVLVQYP-GTEGEVLDYGD 317 (1049)
Q Consensus 247 a~~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~---~~~l~~-l---~-~~t~~V~v~~p-n~~G~i~di~~ 317 (1049)
++.. ..+++.|++++..|+++...++. .|.+++.++ ++++++ + + +++++|+++++ |++|.+.|+++
T Consensus 124 ~l~~-~~~g~~I~~~~~~H~s~~~~~~~----~g~~~~~~~~~d~~~l~~~l~~~~~~~~~~v~~~~v~~~~G~~~~l~~ 198 (406)
T PRK13393 124 TLGS-RLPGCVILSDELNHASMIEGIRH----SRAEKRIFRHNDPADLERKLSDLDPHRPKLVAFESVYSMDGDIAPIAE 198 (406)
T ss_pred Hhhc-CCCCCEEEEccchhHHHHHHHHH----cCCeEEEeCCCCHHHHHHHHHhccCCCCEEEEEcCCCCCCCchhCHHH
Confidence 3321 11567788888999999998853 355555554 445544 3 2 46788888887 68999999999
Q ss_pred HHHHHHhCCcEEEEEeccccccCCCCCCc---------ccceEEEecC-ccccccCCCCCCceEEEEEchhHHhcCCCce
Q 001586 318 FIKNAHANGVKVVMATDLLALTILKPPGE---------LGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRI 387 (1049)
Q Consensus 318 I~~~ah~~galliV~a~~~alg~l~~p~~---------~GaDivvgs~-k~lg~P~~~GGP~~G~l~~~~~l~~~lpgri 387 (1049)
|.++|+++|++++|+ +.++.|++.+.+. -..||++++. |.||.+ | |+++.++++.+.+..
T Consensus 199 i~~l~~~~~~~livD-ea~~~g~~g~~G~g~~~~~~~~~~~~i~~~tlsKa~g~~---G----G~~~~~~~~~~~l~~-- 268 (406)
T PRK13393 199 ICDVAEKHGAMTYLD-EVHAVGLYGPRGGGIAEREGLADRLTIIEGTLAKAFGVM---G----GYITGSAALCDFIRS-- 268 (406)
T ss_pred HHHHHHHcCCEEEEE-CCccccccCCCCCchhhhcCCCCCCeEEEEeCchhhccc---C----ceeeCCHHHHHHHHH--
Confidence 999999999999994 4445454332221 1258888886 888642 2 577777776554310
Q ss_pred eeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHhhcCCCe
Q 001586 388 VGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTV 467 (1049)
Q Consensus 388 vG~s~d~~g~~~~~l~lqtreq~irrekaTsni~t~~~l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~g~~ 467 (1049)
..+.|.. ++-..+....+..+++ .++...+. ..++..++.+++++.|+++| +
T Consensus 269 --------~~~~~~~---------------t~~~~p~~~aa~~aaL--~~~~~~~~--~~~~~~~~~~~l~~~L~~~g-~ 320 (406)
T PRK13393 269 --------FASGFIF---------------TTSLPPAVAAGALASV--RHLKASSA--ERERHQDRVARLRARLDKAG-I 320 (406)
T ss_pred --------hCcCcee---------------cCccCHHHHHHHHHHH--HHHhhCHH--HHHHHHHHHHHHHHHHHHcC-C
Confidence 0000100 0000111223333443 33322232 23566788999999998886 7
Q ss_pred EEcCCCCcceEEEecCC---HHHHHHHHHH-cCCeeeee-----c--CCeEEEEeccCCCHHHHHHHHHHHhC
Q 001586 468 EVQGLPFFDTVKVKCAD---AHAIASAAYK-IEMNLRVV-----D--SNTVTASFDETTTLEDVDKLFIVFAG 529 (1049)
Q Consensus 468 ~v~~~~~~~~v~i~~~~---~~~v~~~L~~-~gI~~~~~-----~--~~~vris~~~~~t~edid~lv~aL~~ 529 (1049)
+++... ...+.+.+++ +.++.++|.+ +||.++.. . .+.+|+|++.++|++|||+++++|..
T Consensus 321 ~~~~~~-~~i~~v~~~~~~~~~~l~~~L~~~~Gi~v~~~~~p~~p~g~~~iRis~~~~~t~edid~l~~~l~~ 392 (406)
T PRK13393 321 PHLPNP-SHIVPVMVGDPVLCKQISDELLDRYGIYVQPINYPTVPRGTERLRITPSPLHTDADIEHLVQALSE 392 (406)
T ss_pred CcCCCC-CCeEEEEeCCHHHHHHHHHHHHHhCCEEEEeECCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHH
Confidence 665321 1123333332 5688899987 59988643 1 25799999999999999999999964
No 164
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.71 E-value=4.8e-17 Score=186.97 Aligned_cols=290 Identities=22% Similarity=0.239 Sum_probs=178.6
Q ss_pred HHHHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCEEEEEcCCCC
Q 001586 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK 712 (1049)
Q Consensus 633 ~i~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~Vv~V~~d~~ 712 (1049)
.+.|.|+.+++++|.+.+-+..|+++.|+.++++++. +++++||+++.+|.+....+.+.|+++++++...+
T Consensus 67 ~I~eAe~~aA~~fGAd~t~flvnGsT~g~~a~i~a~~--------~~gd~VLv~RN~HkSv~~alil~ga~Pvyi~p~~~ 138 (417)
T PF01276_consen 67 IIKEAEELAARAFGADKTFFLVNGSTSGNQAMIMALC--------RPGDKVLVDRNCHKSVYNALILSGAIPVYIPPEDN 138 (417)
T ss_dssp HHHHHHHHHHHHHTESEEEEESSHHHHHHHHHHHHHT--------TTTCEEEEETT--HHHHHHHHHHTEEEEEEEEEE-
T ss_pred HHHHHHHHHHHhcCCCeEEEEecCchHHHHHHHHHhc--------CCCCEEEEcCCcHHHHHHHHHHcCCeEEEecCCcc
Confidence 3789999999999999987888988889988887764 26789999999999988889999999999977422
Q ss_pred -----CCCCH-----HHHHHHHHhcCCC--eEEEEEEcCCccccccccHHHHHHHHHHcCCEEEEeccccccccCcC-CC
Q 001586 713 -----GNINI-----EELRKAAEANRDN--LSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT-SP 779 (1049)
Q Consensus 713 -----g~iD~-----~~L~~~i~~~~~~--taaV~it~Pn~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~-~P 779 (1049)
+.+++ ++++++|+++.+. ..+|++++|+|+|++. |+++|+++||++|..|+||+|+..- .+|. .|
T Consensus 139 ~~gi~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PTY~Gv~~-di~~I~~~~h~~~~~llvDEAhGah-~~F~~lp 216 (417)
T PF01276_consen 139 EYGIIGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSPTYYGVCY-DIKEIAEICHKHGIPLLVDEAHGAH-FGFHPLP 216 (417)
T ss_dssp TTS-BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS-TTSEEE--HHHHHHHHCCTECEEEEE-TT-TT-GGCSGGG
T ss_pred ccCCccCCChhhhhHHHHHHHHHhCccccCceEEEEeCCCCCeEEE-CHHHHHHHhcccCCEEEEEcccccc-ccCCCCc
Confidence 35677 9999999987322 3459999999999998 8999999999999999999997532 2332 12
Q ss_pred ---CccCCc-------EEEeCCCcccccCCCCCCCceeEEEEcccc-cccCCCCccccCCCCCCCCCCCCCCCCCccchh
Q 001586 780 ---GYIGAD-------VCHLNLHKTFCIPHGGGGPGMGPIGVKKHL-APFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWG 848 (1049)
Q Consensus 780 ---g~~GaD-------i~~~s~hK~f~~P~g~GGPg~G~i~~~~~l-~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g 848 (1049)
-.+|+| +++.|.||+++ +--..++|.++... ... .+ +... . .....+++
T Consensus 217 ~~a~~~gad~~~~~~~~vvqS~HKtL~-----altQts~lh~~~~~~v~~--~~-~~~~-------l-~~~~TTSP---- 276 (417)
T PF01276_consen 217 RSALALGADRPNDPGIIVVQSTHKTLP-----ALTQTSMLHVKGDRIVDH--ER-VNEA-------L-SMHQTTSP---- 276 (417)
T ss_dssp TTCSSTTSS-CTSBEEEEEEEHHHHSS-----S-TT-EEEEEETCCCTTH--HH-HHHH-------H-HHHS-SS-----
T ss_pred cchhhccCccccccceeeeechhhccc-----ccccceEEEecCCCcccH--HH-HHHH-------H-HHHcCCCh----
Confidence 357999 99999999985 22245677776543 210 00 0000 0 00011121
Q ss_pred hHHHHHHHHHHHHHH-chhhHHHHHHHHHHHHHHHHHHHh---cc--CCeee----ccCC------Cceee--------E
Q 001586 849 SALILPISYTYIAMM-GSKGLTEASKIAILNANYMAKRLE---KH--YPILF----RGVN------GTVAH--------E 904 (1049)
Q Consensus 849 ~~~~~~~a~a~l~~l-G~eGl~~~~~~~~~~a~yL~~~L~---~~--~~v~~----~g~~------g~~~~--------e 904 (1049)
+..+++..=...++| +.+| ++..++.++++..++++|+ ++ +++.- .++. +...| .
T Consensus 277 SY~lmASlD~a~~~m~~~~G-~~l~~~~i~~a~~~R~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~whgf~~~~~~~ 355 (417)
T PF01276_consen 277 SYPLMASLDVARAQMEEEEG-RELLEEAIELAEEFRKKINRLNDIWGFKVLGPEDVGGEGCWDLDPGENWHGFEGLADDY 355 (417)
T ss_dssp -HHHHHHHHHHHHHHSHHHH-HHHHHHHHHHHHHHHHHHHHHCCT-SSEESS-SEECTCCGCB--TT-TTT--TT--TTS
T ss_pred HHHHHHHHHHHHHHHhhhhh-HHHHHHHHHHHHHHHHHHHhcCCCceEecCCccccCCccccccCccccchhchhcccCc
Confidence 223322222223344 4455 3456677788899999993 33 33321 1100 00001 1
Q ss_pred EEEe-------ccCc-----cccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEccCCCCHH
Q 001586 905 FIVD-------LRGL-----KNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKE 956 (1049)
Q Consensus 905 ~iv~-------~~~~-----~~~~g~~~~~v~k~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~e 956 (1049)
+.+| ++.+ ..+.|+++..+.+.|.++||.+.... ...+.+-+|...|++
T Consensus 356 ~~lDP~K~ti~~pG~~~~g~~~~~Gi~g~~~~~~L~~~~I~~Ek~d---~~~vL~l~t~G~t~~ 416 (417)
T PF01276_consen 356 YMLDPTKLTINTPGIDADGELSELGIPGYIVEKYLREHGIQVEKTD---LYNVLFLFTIGDTKE 416 (417)
T ss_dssp EEE-TTEEEEE-STBETTSSB-SS---HHHHHHHHHHTTEE-SEEE---SSEEEEE--TTS-HH
T ss_pred cccCCcEEEEEccCcCcCCcccccCCCHHHHHHHHHHcCCEEEecc---CccEEEEecCCCCCC
Confidence 2222 2100 02357889999999999999986433 367777787777764
No 165
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.71 E-value=1.1e-15 Score=178.00 Aligned_cols=294 Identities=16% Similarity=0.198 Sum_probs=189.7
Q ss_pred hcHHHHHHHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCEEEEE
Q 001586 628 QGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSV 707 (1049)
Q Consensus 628 ~G~~~~i~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~Vv~V 707 (1049)
+|..++..++++++++++|.+. .+..++|+++.+++ ++.+. .++++|+++...|+.+...+.+.|.+++.+
T Consensus 74 ~g~~~l~~~l~~~l~~~~g~~~-~i~~~sG~~a~~~a---~~~~~-----~~gd~vi~~~~~~~~~~~~~~~~g~~~~~~ 144 (385)
T TIGR01825 74 AGTLRLHEELEEKLAKFKKTEA-ALVFQSGFNTNQGV---LSALL-----RKGDIVLSDELNHASIIDGLRLTKATKKIY 144 (385)
T ss_pred cCCcHHHHHHHHHHHHHhCCCc-EEEECcHHHHHHHH---HHHhC-----CCCCEEEEEccccHHHHHHHHhcCCceEEe
Confidence 4556778899999999999764 46667777665433 33321 256788888888877766667788888776
Q ss_pred cCCCCCCCCHHHHHHHHHhcC-CCeEEEEEEcC-CccccccccHHHHHHHHHHcCCEEEEeccccccccCc-C------C
Q 001586 708 GTDAKGNINIEELRKAAEANR-DNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGL-T------S 778 (1049)
Q Consensus 708 ~~d~~g~iD~~~L~~~i~~~~-~~taaV~it~P-n~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl-~------~ 778 (1049)
+ .+|++++++.++++. +++++|++..+ |.+|.+. ++++|+++|+++|+++++|+++.....+. . .
T Consensus 145 ~-----~~d~~~l~~~l~~~~~~~~~~v~~~~v~~~tG~~~-~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~ 218 (385)
T TIGR01825 145 K-----HADMDDLDRVLRENPSYGKKLIVTDGVFSMDGDVA-PLPEIVELAERYGAVTYVDDAHGSGVMGEAGRGTVHHF 218 (385)
T ss_pred C-----CCCHHHHHHHHHhhccCCCeEEEEecCCcCCCCcc-CHHHHHHHHHHhCCEEEEECcccccCcCCCCCccHhhc
Confidence 5 379999999887543 36888877766 5589888 79999999999999999999874221110 0 0
Q ss_pred CCccCCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHH
Q 001586 779 PGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYT 858 (1049)
Q Consensus 779 Pg~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a 858 (1049)
.-+.+.|+++.+++|+|+. +| |+++.++++...+.... .....++.. .+..+.++.+
T Consensus 219 ~~~~~~~i~~~s~sK~~~~------~g-G~~~~~~~~~~~~~~~~-----------~~~~~~~~~-----~~~~~~a~~~ 275 (385)
T TIGR01825 219 GLEDKVDIQVGTLSKAIGV------VG-GYAAGHKELIEYLKNRA-----------RPFLFSTAQ-----PPAVVAALAA 275 (385)
T ss_pred CCCcCCcEEEEeccHHhhc------CC-CEEecCHHHHHHHHHhC-----------ccccccCCC-----CHHHHHHHHH
Confidence 1124678888999999852 33 77777766555432100 000001111 1122223334
Q ss_pred HHHHHchhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHHHCCcccCCC
Q 001586 859 YIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTM 937 (1049)
Q Consensus 859 ~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~-~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~ 937 (1049)
.+..+... .+..++..++.+++.++|++. +++. .+.++. +.+.+.. ..+..+++++|.++||.++..
T Consensus 276 al~~~~~~--~~~~~~~~~~~~~l~~~L~~~g~~~~--~~~~~~---~~~~~~~-----~~~~~~~~~~L~~~gi~v~~~ 343 (385)
T TIGR01825 276 AVDELQRS--PELMERLWDNTRFFKAGLGKLGYDTG--GSETPI---TPVVIGD-----EKAAQEFSRRLFDEGIFAQSI 343 (385)
T ss_pred HHHHHhcC--HHHHHHHHHHHHHHHHHHHHcCCCCC--CCCCCE---EEEEECC-----HHHHHHHHHHHHHCCcEEccc
Confidence 44433221 134455567788999999875 4432 222222 2222221 123568999999999987644
Q ss_pred CCCC----CCEEEEEccCCCCHHHHHHHHHHHHHHHHH
Q 001586 938 SWPV----PGTLMIEPTESESKEELDRYCDALISIREE 971 (1049)
Q Consensus 938 ~~p~----~~~lri~~t~~~t~eeid~fv~aL~~i~~~ 971 (1049)
.+|. .+.+|++++..++++|+++++++|++++++
T Consensus 344 ~~~~~~~~~~~iRi~~~~~~~~e~i~~~~~~l~~~~~~ 381 (385)
T TIGR01825 344 VFPTVPRGTARIRNIPTAEHTKDDLDQALDAYEKVGKE 381 (385)
T ss_pred CCCCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHHHHH
Confidence 4431 268999999999999999999999988754
No 166
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.71 E-value=1.6e-15 Score=178.34 Aligned_cols=327 Identities=17% Similarity=0.213 Sum_probs=215.1
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhcCCCccc----cccCCCCCCCCCcHHHHHHHHhCCccccccCCChhhHhhhHHHHHHH
Q 001586 140 KFSKFDEGLTESQMIEHMQKLASMNKVYK----SFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLN 215 (1049)
Q Consensus 140 ~lp~~~~~~sE~e~~~~~~~la~~n~~~~----~~lG~g~y~~~~p~~i~~~~~~~~~~~t~ytpyq~e~sqg~le~l~e 215 (1049)
.+| +.+..+.+++.++..+..++..+. .+...+..+..+|+...+.+.. +..-+...+..+.++.+.-.+
T Consensus 32 ~~p--~~g~p~~~v~~~l~~~~~~d~~~~~~~p~~~~~~~~~~~~~~~a~~~~~~----~~~~nl~d~~~~p~a~~~E~~ 105 (460)
T COG0076 32 MAP--EKGEPLEEVLDELAELLIKDELYLDGHPRANLAGFCPTRVPPVAAELLVS----ALNKNLGDPDESPAAAELEER 105 (460)
T ss_pred cCC--ccCCchhhHHHHHHHHhhcccccccCCcceEEEccCCCCCHHHHHHHHHH----HHhhcCCCcccChhHHHHHHH
Confidence 455 578999999999999977765432 2334444445577766543332 112244455666788888888
Q ss_pred HHHHHHHHhCCC-CcceEeccchHHHHHHHHHHhhhcc----C-------CCCEEEEcCCCCHHHHHHHHHhhcCCCeEE
Q 001586 216 FQTMIADLTGLP-MSNASLLDEGTAAAEAMAMCNNIQK----G-------KKKTFIIASNCHPQTIDICITRADGFDIKV 283 (1049)
Q Consensus 216 ~q~~ia~L~G~~-~~n~sl~~~~Ta~~eA~~~a~~~~~----~-------~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v 283 (1049)
.-.|+++|+|++ .+...++.|||.+..-.+++.+..+ . ...+||++...|.++.+.++. +|++.
T Consensus 106 ~v~~l~~l~~~~~~~~G~~t~GgTean~lal~aar~~~~~~~~~~~~~~~~~P~ii~s~~aH~s~~Kaa~~----lG~~~ 181 (460)
T COG0076 106 VVNMLSDLLGAPEEASGTFTSGGTEANLLALLAARERWRKRALAESGKPGGKPNIVCSETAHFSFEKAARY----LGLGL 181 (460)
T ss_pred HHHHHHHHhCCCCCCceEEEcChHHHHHHHHHHHHHHHHHHhhhcccccCCCCeEEecCcchhHHHHHHHH----hCCCc
Confidence 889999999994 5567888999965553333333211 0 123799999999999998764 35544
Q ss_pred EEeC---------cchhhc-cCCCEeE--EEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEecccccc--CCCCCCcc-
Q 001586 284 VVSD---------LKDIDY-KSGDVCG--VLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALT--ILKPPGEL- 347 (1049)
Q Consensus 284 ~~v~---------~~~l~~-l~~~t~~--V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg--~l~~p~~~- 347 (1049)
+.++ ++++++ +++++.. |+.+.+ +.+|.++||++|+++|+++|++++|++-.-+.- .+...+.|
T Consensus 182 ~~v~~~~~~~~id~~~l~~~i~~~t~~g~vV~~aGtT~~G~iDdi~~ia~ia~~~~i~lHVDAA~GG~~~pf~~~~~~~~ 261 (460)
T COG0076 182 RRVPTVPTDYRIDVDALEEAIDENTIGGVVVGTAGTTDTGSIDDIEELADIAEEYGIWLHVDAAFGGFLLPFLEPDGRWD 261 (460)
T ss_pred eeEEeccCccccCHHHHHHHHHhhccCceEEEEecCCCCCccCCHHHHHHHHHHcCCcEEEEccccceeecccCccchhh
Confidence 4433 345666 7777776 777776 579999999999999999999999965221111 12233444
Q ss_pred ----cceEEEecCcc-ccccCCCCCCceEEEEEchh--HHhcCC--CceeeeeecCCCCcceeeecccccccccccccCC
Q 001586 348 ----GADIVVGSAQR-FGVPMGYGGPHAAFLATSQE--YKRMMP--GRIVGVSIDSSGKPALRVAMQTREQHIRRDKATS 418 (1049)
Q Consensus 348 ----GaDivvgs~k~-lg~P~~~GGP~~G~l~~~~~--l~~~lp--grivG~s~d~~g~~~~~l~lqtreq~irrekaTs 418 (1049)
+||-++.+++| +..|. ++|++.+|++ +.+.+- ..+.+.+ +.+.+.+.. +|
T Consensus 262 f~l~~vdSIt~d~HK~g~aP~-----~~G~il~rd~e~l~~~~~~~~~yl~~~----~~~~~ti~~-sr----------- 320 (460)
T COG0076 262 FGLEGVDSITVDGHKYGLAPI-----GCGVVLFRDEEALRRILIFADYYLPGG----GIPNFTILG-SR----------- 320 (460)
T ss_pred cCCCCceEEEECcccccCCCC-----CceEEEEECHHHhhhhhhcccccCCCC----CcCceeEee-cc-----------
Confidence 89999999955 45575 4566777764 443321 1111100 112222221 11
Q ss_pred CccchhHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEcCCCCcceEEEecCC----HHHHHHHHHH
Q 001586 419 NICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD----AHAIASAAYK 494 (1049)
Q Consensus 419 ni~t~~~l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~g~~~v~~~~~~~~v~i~~~~----~~~v~~~L~~ 494 (1049)
. .....+..+. +.++|.+|++++.+++.+++++|+++|++.|.++++++|..+.|+|+.+. ..+..+++.+
T Consensus 321 ~---~~~~~~~~~~--l~~lG~eGy~~l~~~~~~~a~~la~~l~~~~~~e~~~~p~l~~V~fr~~~~~~~~~~~~~~~~~ 395 (460)
T COG0076 321 P---GRQALALYAN--LRRLGREGYRKLLDRTLELARYLAEELEKLGDFELVNEPELPIVAFRLKDDEDTLADLSERLDR 395 (460)
T ss_pred c---hHHHHHHHHH--HHHhCHhHHHHHHHHHHHHHHHHHHHHHhCCCcEeecCCccceEEEEcCCcccchhchHHHHHh
Confidence 0 0111122222 58999999999999999999999999999977999988888899998754 3466677777
Q ss_pred cCCeeeee
Q 001586 495 IEMNLRVV 502 (1049)
Q Consensus 495 ~gI~~~~~ 502 (1049)
.|+.+...
T Consensus 396 ~gw~v~~~ 403 (460)
T COG0076 396 RGWQVPAQ 403 (460)
T ss_pred cCceeecc
Confidence 89987543
No 167
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.71 E-value=7.8e-16 Score=180.88 Aligned_cols=275 Identities=15% Similarity=0.170 Sum_probs=178.6
Q ss_pred hHHHHHHHHHHHHHHHhCCCCcceEeccchHHHHHHHHHH-hhhccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEe
Q 001586 208 GRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMC-NNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVS 286 (1049)
Q Consensus 208 g~le~l~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a-~~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v 286 (1049)
|..+...++++.+|+++|.+. +.++.+|+.+.++++.. .+. .+++.|+.+...|.+....++. .++++..+
T Consensus 88 g~~~~~~~l~~~la~~~g~~~--~~~~~sG~~an~~ai~~l~~~--~~~~~i~~~~~~h~s~~~~~~~----~~~~~~~~ 159 (407)
T PRK09064 88 GTNHYHVELERELADLHGKEA--ALVFTSGYVSNDATLSTLAKL--IPDCVIFSDELNHASMIEGIRR----SRCEKHIF 159 (407)
T ss_pred cCHHHHHHHHHHHHHHhCCCc--EEEECcHHHHHHHHHHHHhCC--CCCCEEEEeCcchHHHHHHHHH----cCCcEEEE
Confidence 445677888899999999643 55667777665654432 222 2556666777889998888753 34555444
Q ss_pred C---cchhhc-cC----CCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCC---------ccc
Q 001586 287 D---LKDIDY-KS----GDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPG---------ELG 348 (1049)
Q Consensus 287 ~---~~~l~~-l~----~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~p~---------~~G 348 (1049)
+ ++++++ +. +++++|++.+| |++|.+.|+++|.++|+++|++++|+ +.+++|.+.+.+ ...
T Consensus 160 ~~~d~~~le~~l~~~~~~~~~~v~~~~v~s~~G~~~~l~~i~~l~~~~~~~livD-Ea~~~G~~g~~g~g~~~~~~~~~~ 238 (407)
T PRK09064 160 RHNDVAHLEELLAAADPDRPKLIAFESVYSMDGDIAPIAEICDLADKYNALTYLD-EVHAVGMYGPRGGGIAERDGLMDR 238 (407)
T ss_pred CCCCHHHHHHHHHhccCCCCeEEEEeCCCCCCccccCHHHHHHHHHHcCCEEEEE-CCCcccccCCCCCChHHhcCCCCC
Confidence 3 345555 32 56889999887 78999999999999999999999994 444544432221 114
Q ss_pred ceEEEecC-ccccccCCCCCCceEEEEEchhHHhcCCCceeeeeecCCCCcceeeecccccccccccccCCCccchhHHH
Q 001586 349 ADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALL 427 (1049)
Q Consensus 349 aDivvgs~-k~lg~P~~~GGP~~G~l~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irrekaTsni~t~~~l~ 427 (1049)
.||++++. |.||.+ | ||+++++++++.+... .+.|.+ |... ++....
T Consensus 239 ~div~~t~sKa~g~~---G----G~~~~~~~~~~~l~~~----------~~~~~~--------------t~~~-~~~~~~ 286 (407)
T PRK09064 239 IDIIEGTLAKAFGVM---G----GYIAGSAALVDAVRSY----------APGFIF--------------TTSL-PPAIAA 286 (407)
T ss_pred CeEEEEecchhhhcc---C----ceEecCHHHHHHHHHh----------Cccccc--------------cCcC-CHHHHH
Confidence 58998886 888632 2 6888887776554100 000110 0000 111222
Q ss_pred HHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEcCCCCcceEEEecCC---HHHHHHHHHH-cCCeeeeec
Q 001586 428 ANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD---AHAIASAAYK-IEMNLRVVD 503 (1049)
Q Consensus 428 a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~g~~~v~~~~~~~~v~i~~~~---~~~v~~~L~~-~gI~~~~~~ 503 (1049)
+..+++ .++... ....+++.++.+++.+.|+++| +++++.. ...+.+.++. +.++.++|.+ +||.++...
T Consensus 287 aa~~al--~~~~~~--~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~-~~iv~i~~~~~~~~~~l~~~L~~~~gi~v~~~~ 360 (407)
T PRK09064 287 AALASI--RHLKES--NEERERHQERAAKLKAALDAAG-IPVMPNE-SHIVPVMVGDPEKCKKASDMLLEEHGIYVQPIN 360 (407)
T ss_pred HHHHHH--HHHhcC--HHHHHHHHHHHHHHHHHHHHcC-CCCCCCC-CCEEEEEeCCHHHHHHHHHHHHHhCCEEEeeEC
Confidence 333333 444333 3446778899999999999987 8766421 1223344433 5689998875 599886531
Q ss_pred -------CCeEEEEeccCCCHHHHHHHHHHHhC
Q 001586 504 -------SNTVTASFDETTTLEDVDKLFIVFAG 529 (1049)
Q Consensus 504 -------~~~vris~~~~~t~edid~lv~aL~~ 529 (1049)
.+.+|+|++.++|++|+|+++++|..
T Consensus 361 ~p~~~~~~~~lRis~~~~~t~edi~~l~~~l~~ 393 (407)
T PRK09064 361 YPTVPRGTERLRITPTPFHTDEMIDHLVEALVE 393 (407)
T ss_pred CCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence 25799999999999999999999963
No 168
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.71 E-value=1.5e-15 Score=174.82 Aligned_cols=285 Identities=14% Similarity=0.172 Sum_probs=184.7
Q ss_pred HHHHHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCEEEEEcCCC
Q 001586 632 EMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA 711 (1049)
Q Consensus 632 ~~i~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~Vv~V~~d~ 711 (1049)
....++++.+++++|.+. .+..++|+++.+++ ++.+. .++++|+++...|+.+...+.+.|.+++.++.
T Consensus 61 ~~~~~l~~~la~~~~~~~-~i~~~~G~~~~~~~---l~~~~-----~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-- 129 (360)
T TIGR00858 61 PLHEELEEELAEWKGTEA-ALLFSSGYLANVGV---ISALV-----GKGDLILSDALNHASLIDGCRLSGARVRRYRH-- 129 (360)
T ss_pred HHHHHHHHHHHHHhCCCC-EEEECchHHHHHHH---HHHhC-----CCCCEEEEEccccHHHHHHHHhcCCceEEecC--
Confidence 345678899999998654 46667777655433 33321 25688999888887777778889999988875
Q ss_pred CCCCCHHHHHHHHHhcC-CCeEEEEEEcCC-ccccccccHHHHHHHHHHcCCEEEEeccccccccCcC-CC-----C--c
Q 001586 712 KGNINIEELRKAAEANR-DNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT-SP-----G--Y 781 (1049)
Q Consensus 712 ~g~iD~~~L~~~i~~~~-~~taaV~it~Pn-~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~-~P-----g--~ 781 (1049)
+|+++|+++++++. +++++|++.+++ .+|.+. ++++|.++|+++|+++++|+++.....+.. .+ + .
T Consensus 130 ---~d~~~l~~~~~~~~~~~~~~v~~~~~~~~~G~~~-~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~ 205 (360)
T TIGR00858 130 ---NDVEHLERLLEKNRGERRKLIVTDGVFSMDGDIA-PLPQLVALAERYGAWLMVDDAHGTGVLGEDGRGTLEHFGLKP 205 (360)
T ss_pred ---CCHHHHHHHHHHcccCCCeEEEEeCCccCCCCCc-CHHHHHHHHHHcCcEEEEECcccccCcCCCCCchHHhcCCCc
Confidence 69999999997543 357888887774 589887 799999999999999999998753221111 00 1 1
Q ss_pred cCCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHH
Q 001586 782 IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIA 861 (1049)
Q Consensus 782 ~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~ 861 (1049)
.+.||++.+++|+|+. +| |+++.++++.+.+.... ....... .. +...+.++.+.+.
T Consensus 206 ~~~~i~i~s~sK~~~~------~g-G~~~~~~~~~~~~~~~~-----------~~~~~~~-~~----~~~~~~a~~~al~ 262 (360)
T TIGR00858 206 EPVDIQVGTLSKALGS------YG-AYVAGSQALIDYLINRA-----------RTLIFST-AL----PPAVAAAALAALE 262 (360)
T ss_pred cCCcEEEEechhhhhc------cC-cEEEcCHHHHHHHHHhC-----------ccceecC-CC----CHHHHHHHHHHHH
Confidence 3678999999999853 33 78887776554431000 0000000 11 1111222233333
Q ss_pred HHchhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHHHCCcccCCCCC-
Q 001586 862 MMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSW- 939 (1049)
Q Consensus 862 ~lG~eGl~~~~~~~~~~a~yL~~~L~~~-~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~- 939 (1049)
.+.. ..+..++..++.+++.+.|+++ +.+. .+.+.+ +.+.++. +.+..++.++|.++||.+.....
T Consensus 263 ~~~~--~~~~~~~~~~~~~~l~~~L~~~~~~~~--~~~~~~---~~~~~~~-----~~~~~~~~~~l~~~gI~v~~~~~~ 330 (360)
T TIGR00858 263 LIQE--EPWRREKLLALIARLRAGLEALGFTLM--PSCTPI---VPVIIGD-----NASALALAEELQQQGIFVGAIRPP 330 (360)
T ss_pred HHhh--CHHHHHHHHHHHHHHHHHHHHcCCccC--CCCCCE---EEEEeCC-----HHHHHHHHHHHHHCCeeEeeeCCC
Confidence 3321 2345567778889999999875 3332 111222 4444431 12456899999999998753221
Q ss_pred --C-CCCEEEEEccCCCCHHHHHHHHHHHH
Q 001586 940 --P-VPGTLMIEPTESESKEELDRYCDALI 966 (1049)
Q Consensus 940 --p-~~~~lri~~t~~~t~eeid~fv~aL~ 966 (1049)
+ ..+++|++++..++++|+++++++|+
T Consensus 331 ~~~~~~~~iRis~~~~~~~~~i~~~l~~l~ 360 (360)
T TIGR00858 331 TVPAGTSRLRLTLSAAHTPGDIDRLAEALK 360 (360)
T ss_pred CCCCCCceEEEEEcCCCCHHHHHHHHHhhC
Confidence 1 13589999999999999999999873
No 169
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.71 E-value=2.1e-15 Score=177.39 Aligned_cols=277 Identities=13% Similarity=0.117 Sum_probs=172.9
Q ss_pred HHHHHHHH----HHHHHhCCCCcceEeccchHHHHHHHHHHhhhccCCCCEEEEcCCCCHHH-HHHHHH-----hh--cC
Q 001586 211 ESLLNFQT----MIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQT-IDICIT-----RA--DG 278 (1049)
Q Consensus 211 e~l~e~q~----~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a~~~~~~~g~~Vlv~~~~Hps~-~~~l~~-----~a--~~ 278 (1049)
+.+.++++ .+++++|.+.+.+ .+.+||+|..+++.++ .. +||+|++++..|.+. ...++. .. ..
T Consensus 70 ~~~~~lE~~~~~~la~l~g~~~alv-~~~SG~~A~~~~l~al-~~--~GD~Vl~~~~~~~~~~~~g~~~~~~~~~~~~~~ 145 (416)
T PRK13034 70 EFVDEVEALAIERAKQLFGCDYANV-QPHSGSQANGAVYLAL-LK--PGDTILGMSLSHGGHLTHGAKVSLSGKWYNAVQ 145 (416)
T ss_pred hHHHHHHHHHHHHHHHHhCCCceEE-ecCCcHHHHHHHHHHh-cC--CCCEEEEcCccceeeeecCCcceeccceeeeEE
Confidence 55666676 9999999886322 4578899988888776 33 899999999999773 222110 00 01
Q ss_pred CCeEEE--EeCcchhhc-cC-CCEeEEEEEcCCCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCC---CCc-ccce
Q 001586 279 FDIKVV--VSDLKDIDY-KS-GDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKP---PGE-LGAD 350 (1049)
Q Consensus 279 ~gi~v~--~v~~~~l~~-l~-~~t~~V~v~~pn~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~---p~~-~GaD 350 (1049)
++++.. .+|++++++ +. .++++|++..+ .+|...|+++|.++||++|++++|+ +.+++|.... ++. .++|
T Consensus 146 ~~~~~~~~~~d~~~le~~l~~~~~klVi~~~~-~~g~~~dl~~l~~la~~~g~~livD-~Aha~G~~~~g~~~~~~~~~D 223 (416)
T PRK13034 146 YGVDRLTGLIDYDEVEELAKEHKPKLIIAGFS-AYPRELDFARFREIADEVGALLMVD-MAHIAGLVAAGEHPNPFPHAH 223 (416)
T ss_pred cccccccCCcCHHHHHHHHhhcCCeEEEECCC-ccccccCHHHHHHHHHHcCCEEEEe-CcccccCcccCCCCCCCCCce
Confidence 121111 155567766 53 35777776554 4688889999999999999999994 3445444321 111 2599
Q ss_pred EEEecC-ccccccCCCCCCceEEEEEchh-HHhcCCC-ceeeeeecCCCCcceeeecccccccccccccCCCccchhHHH
Q 001586 351 IVVGSA-QRFGVPMGYGGPHAAFLATSQE-YKRMMPG-RIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALL 427 (1049)
Q Consensus 351 ivvgs~-k~lg~P~~~GGP~~G~l~~~~~-l~~~lpg-rivG~s~d~~g~~~~~l~lqtreq~irrekaTsni~t~~~l~ 427 (1049)
+++++. |+|++| .+|+++++++ +..++.. +..| ++ ++++ +....
T Consensus 224 i~~~s~~K~l~g~------~GG~v~~~~~~~~~~~~~~~~~~--------------~~----------~~~~---~~~~a 270 (416)
T PRK13034 224 VVTTTTHKTLRGP------RGGMILTNDEEIAKKINSAVFPG--------------LQ----------GGPL---MHVIA 270 (416)
T ss_pred EEEEeCcccCCCC------CCeEEEECcHHHHHHHHhhcCCc--------------cc----------CCcc---HHHHH
Confidence 999998 777443 3466666543 3222210 0000 00 0011 01222
Q ss_pred HHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEcCC-CCcce--EEEecCC--HHHHHHHHHHcCCeeeee
Q 001586 428 ANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL-PFFDT--VKVKCAD--AHAIASAAYKIEMNLRVV 502 (1049)
Q Consensus 428 a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~g~~~v~~~-~~~~~--v~i~~~~--~~~v~~~L~~~gI~~~~~ 502 (1049)
+...++ ..+-.++..+..+++++++++|+++|++.| +++... ...+. +.+...+ ...+.++|.++||.+...
T Consensus 271 a~~~al--~~~~~~~~~~~~~~l~~~a~~l~~~L~~~G-~~~~~~~~~t~i~~v~~~~~~~~~~~~~~~L~~~GI~v~~~ 347 (416)
T PRK13034 271 AKAVAF--GEALQPEFKTYAKQVIANAQALAEVLKERG-YDLVSGGTDNHLLLVDLRPKGLSGKDAEQALERAGITVNKN 347 (416)
T ss_pred HHHHHH--HHHhChhHHHHHHHHHHHHHHHHHHHHHcC-CEeccCCCCCcEEEEEcCCCCCCHHHHHHHHHhCCcEEecc
Confidence 222121 222123445678999999999999999887 988642 22233 3444333 467778899999988641
Q ss_pred ----------cCCeEEEEecc----CCCHHHHHHHHHHHhC
Q 001586 503 ----------DSNTVTASFDE----TTTLEDVDKLFIVFAG 529 (1049)
Q Consensus 503 ----------~~~~vris~~~----~~t~edid~lv~aL~~ 529 (1049)
.+..+|+++++ .+|++|||+++++|..
T Consensus 348 ~~p~~~~~p~~~~~lR~~~~~~t~~~~~~~di~~l~~~l~~ 388 (416)
T PRK13034 348 TVPGDTESPFVTSGIRIGTPAGTTRGFGEAEFREIANWILD 388 (416)
T ss_pred CCCCCCcCCCCCCeeEeCcHHHHhCCCCHHHHHHHHHHHHH
Confidence 23579999999 6669999999999963
No 170
>PLN02624 ornithine-delta-aminotransferase
Probab=99.71 E-value=4.1e-15 Score=177.57 Aligned_cols=293 Identities=20% Similarity=0.315 Sum_probs=189.4
Q ss_pred HHHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHh-cCCC-CCCEEE-EcCCCCCccHHHHHhcC---------
Q 001586 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKA-RGDH-HRNVCI-IPVSAHGTNPATAAMCG--------- 701 (1049)
Q Consensus 634 i~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~-~G~~-~r~~VL-ip~saHg~~pa~a~~~G--------- 701 (1049)
..++.+.|++++|++. .++.+||+++++++++.+|.|... +|.. ++.+|+ ...+.||....+..+.+
T Consensus 119 ~~~la~~L~~~~~~~~-~~f~~SGseA~e~AlklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~ 197 (474)
T PLN02624 119 FPEFAEYLTSMFGYDM-VLPMNTGAEGVETAIKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMSCDNEATRGFG 197 (474)
T ss_pred HHHHHHHHHhhcCCCe-EEEeCChHHHHHHHHHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcCCCccccccCC
Confidence 3478889999998775 466899999999999988887532 2322 233455 56778887655543221
Q ss_pred ---CEEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-ccccccc-c--HHHHHHHHHHcCCEEEEecccccccc
Q 001586 702 ---MKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEE-G--IDEICKIIHDNGGQVYMDGANMNAQV 774 (1049)
Q Consensus 702 ---~~Vv~V~~d~~g~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~~-d--i~eI~~lah~~G~ll~vD~A~~~a~~ 774 (1049)
-.+..++. .|+++|++.++.+.+++++|+++.+. ..|.+.+ + +++|.++|++||+++++|+++.
T Consensus 198 ~~~~~~~~~~~-----~d~~~l~~~l~~~~~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~t---- 268 (474)
T PLN02624 198 PLLPGHLKVDF-----GDLDALEKIFEEDGDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQT---- 268 (474)
T ss_pred CCCCCceEeCC-----CCHHHHHHHHHhCCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc----
Confidence 11334444 37899999997666789999998874 5787652 2 9999999999999999999863
Q ss_pred CcCCCCc--------cCCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccc
Q 001586 775 GLTSPGY--------IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAP 846 (1049)
Q Consensus 775 gl~~Pg~--------~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~ 846 (1049)
|+.+.|. ..+|++++ .|.| ++|+..+|.+++++++...+.... + +. ++
T Consensus 269 G~GrtG~~~a~~~~~i~pDiv~l--sK~l----ggG~~pigav~~~~~i~~~~~~~~---------~------~~---T~ 324 (474)
T PLN02624 269 GLARTGKMLACDWEEVRPDVVIL--GKAL----GGGVIPVSAVLADKDVMLCIKPGE---------H------GS---TF 324 (474)
T ss_pred CcCcCcchhhHHhcCCCCCEEEe--cccc----cCCCCcceeeeecHHHHhHhccCC---------c------CC---CC
Confidence 3333332 24688876 4765 455567888888876554331000 0 00 11
Q ss_pred hhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc---CC-ee--eccCCCceeeEEEEeccCccccCCCCH
Q 001586 847 WGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YP-IL--FRGVNGTVAHEFIVDLRGLKNTAGIEP 920 (1049)
Q Consensus 847 ~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~---~~-v~--~~g~~g~~~~e~iv~~~~~~~~~g~~~ 920 (1049)
.++++.++++.+.|..+..+++.+ +..++.++++++|+++ +. ++ ..| .| .+..+.++.+. ......
T Consensus 325 ~g~pl~~aaa~aaLe~l~~~~l~~---~~~~~~~~l~~~L~~l~~~~~~~i~~vrg-~G-~~~~i~l~~~~---~~~~~a 396 (474)
T PLN02624 325 GGNPLASAVAMAALQVVQDEKLAE---RSAKLGQELRDQLQKIQKQFPKLIKEVRG-RG-LLNAVVLNSPK---LGPVSA 396 (474)
T ss_pred CCCHHHHHHHHHHHHHHHhchHHH---HHHHHHHHHHHHHHHHHHhCCCceEEEEe-eE-EEEEEEecCCC---cChHHH
Confidence 234455556666677665555443 4445667788877764 22 11 112 12 23233333210 001235
Q ss_pred HHHHHHHHHCCcccCCCCCCCCCEEEEEccCCCCHHHHHHHHHHHHHHHHH
Q 001586 921 EDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREE 971 (1049)
Q Consensus 921 ~~v~k~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~eeid~fv~aL~~i~~~ 971 (1049)
.++++.|.++|+.+.... .+.||++|+..+|++|||++++.|+++++.
T Consensus 397 ~~~~~~L~e~GV~v~p~~---~~~lR~~p~l~~t~e~id~~l~~L~~~l~~ 444 (474)
T PLN02624 397 YDVCLKLKERGLLAKPTH---DTIIRLAPPLSISEDELQECSKALSDVLEH 444 (474)
T ss_pred HHHHHHHHhCCeEEecCC---CCEEEEECCccCCHHHHHHHHHHHHHHHHH
Confidence 688999999999874322 478999999999999999999999887654
No 171
>PLN02483 serine palmitoyltransferase
Probab=99.71 E-value=2e-15 Score=180.73 Aligned_cols=294 Identities=17% Similarity=0.198 Sum_probs=186.7
Q ss_pred HHHHHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCEEEEEcCCC
Q 001586 632 EMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA 711 (1049)
Q Consensus 632 ~~i~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~Vv~V~~d~ 711 (1049)
....++++.+++++|.+.. +..++|..++.+++.++. .++++|+++...|.+....++..|++++.++.+
T Consensus 146 ~~~~ele~~lA~~~g~~~a-i~~~~G~~an~~~i~al~--------~~Gd~Vi~d~~~h~s~~~~~~~~Ga~v~~~~~~- 215 (489)
T PLN02483 146 KLHRELEELVARFVGKPAA-IVFGMGYATNSTIIPALI--------GKGGLIISDSLNHNSIVNGARGSGATIRVFQHN- 215 (489)
T ss_pred HHHHHHHHHHHHHhCCCcE-EEECCHHHHHHHHHHHhC--------CCCCEEEEcchhhHHHHHHHHHcCCeEEEEeCC-
Confidence 4466899999999997664 555667655533333221 257899999988877777788999999999863
Q ss_pred CCCCCHHHHHHHHHhc----CCCe-----EEEEEEcC--CccccccccHHHHHHHHHHcCCEEEEeccccccccCcC---
Q 001586 712 KGNINIEELRKAAEAN----RDNL-----STLMVTYP--STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT--- 777 (1049)
Q Consensus 712 ~g~iD~~~L~~~i~~~----~~~t-----aaV~it~P--n~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~--- 777 (1049)
|+++|++++++. .++| +.+++..+ |..|.+. ++++|.++|+++|+++++|+++..+..|..
T Consensus 216 ----d~~~le~~l~~~i~~~~p~t~~p~~k~livve~v~s~~G~~~-~l~~I~~la~~~~~~livDEa~s~g~~G~~G~g 290 (489)
T PLN02483 216 ----TPSHLEEVLREQIAEGQPRTHRPWKKIIVIVEGIYSMEGELC-KLPEIVAVCKKYKAYVYLDEAHSIGAVGKTGRG 290 (489)
T ss_pred ----CHHHHHHHHHhhhhccccccccCCceEEEEECCCCCCCCccc-CHHHHHHHHHHcCCEEEEECcCccCccCCCCCc
Confidence 678888777531 1222 44555554 4579887 799999999999999999999753322210
Q ss_pred CC---C--ccCCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHH
Q 001586 778 SP---G--YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALI 852 (1049)
Q Consensus 778 ~P---g--~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~ 852 (1049)
.+ + ..+.||++.+++|+|+. +| |+++.++++.+.+.....+ .. .+...+ + ..
T Consensus 291 ~~~~~~v~~~~~dI~~~SfSKs~g~------~G-G~i~~~~~li~~l~~~~~~---------~~--~~~~~~-p----~~ 347 (489)
T PLN02483 291 VCELLGVDPADVDIMMGTFTKSFGS------CG-GYIAGSKELIQYLKRTCPA---------HL--YATSMS-P----PA 347 (489)
T ss_pred hHHhcCCCcccCcEEEEecchhccc------Cc-eEEEcCHHHHHHHHHhCcc---------cc--ccCCcC-H----HH
Confidence 00 1 13579999999999853 22 8898887766554211000 00 011111 1 11
Q ss_pred HHHHHHHHHHH-chhh---HHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHH
Q 001586 853 LPISYTYIAMM-GSKG---LTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRL 927 (1049)
Q Consensus 853 ~~~a~a~l~~l-G~eG---l~~~~~~~~~~a~yL~~~L~~~-~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L 927 (1049)
+..+.+.+..+ +.+| ..+..++..++.+++.+.|+++ +.+. ....++... +.+ .. .....+++++|
T Consensus 348 ~~~~~aaL~~l~~~~g~~~~~~~~~~l~~~~~~l~~~L~~~G~~v~-~~~~sp~~~-l~l-~~------~~~~~~~~~~L 418 (489)
T PLN02483 348 VQQVISAIKVILGEDGTNRGAQKLAQIRENSNFFRSELQKMGFEVL-GDNDSPVMP-IML-YN------PAKIPAFSREC 418 (489)
T ss_pred HHHHHHHHHHHHhCccccchHHHHHHHHHHHHHHHHHHHHCCCccc-CCCCCCEEE-EEE-CC------HHHHHHHHHHH
Confidence 11122223322 2221 2334566778899999999885 4432 111123221 111 11 12355789999
Q ss_pred HHCCcccCCCCCC---C-CCEEEEEccCCCCHHHHHHHHHHHHHHHHHH
Q 001586 928 MDYGFHGPTMSWP---V-PGTLMIEPTESESKEELDRYCDALISIREEI 972 (1049)
Q Consensus 928 ~~~Gi~~~~~~~p---~-~~~lri~~t~~~t~eeid~fv~aL~~i~~~i 972 (1049)
.++||.+....|| . .+.+|++++..+|++|||+++++|.++.+.+
T Consensus 419 l~~GI~v~~~~fp~~p~~~~~vRi~isa~~t~edId~~l~~L~~~~~~~ 467 (489)
T PLN02483 419 LKQNVAVVVVGFPATPLLLARARICISASHSREDLIKALEVISEVGDLV 467 (489)
T ss_pred HHCCcEEeeeCCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHh
Confidence 9999987545554 1 3689999999999999999999999987653
No 172
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.71 E-value=3.1e-15 Score=176.30 Aligned_cols=287 Identities=20% Similarity=0.259 Sum_probs=190.6
Q ss_pred HHHHHHHHHHhhCCC-ccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEE-EcCCCCCccHHHHHhcCC---------
Q 001586 634 FNNLGEWLCTITGFD-SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGM--------- 702 (1049)
Q Consensus 634 i~el~~~la~l~G~~-~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VL-ip~saHg~~pa~a~~~G~--------- 702 (1049)
..++.+.|++++..+ ...++.+||+++++++++.+|.|...+| |.+|| ...+.||....+....|-
T Consensus 119 ~~~lAe~L~~~~p~~~~~v~f~~SGsEA~e~AlklAr~~t~~~g---r~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p 195 (442)
T TIGR03372 119 RALLAKTLAALTPGKLKYSFFCNSGTESVEAALKLAKAYQSPRG---KFTFIAASGAFHGKSLGALSATAKPAFRKPFMP 195 (442)
T ss_pred HHHHHHHHHHhCCCCcCEEEEeCCchHHHHHHHHHHHHHHhhcC---CcEEEEECCCccCCCHHHhhccCCcccCCCCCC
Confidence 457888999988643 2347789999999999999998854333 45566 677899987665433221
Q ss_pred ---EEEEEcCCCCCCCCHHHHHHHHHh---cCCCeEEEEEEcC-Cccccccc---cHHHHHHHHHHcCCEEEEecccccc
Q 001586 703 ---KIVSVGTDAKGNINIEELRKAAEA---NRDNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNA 772 (1049)
Q Consensus 703 ---~Vv~V~~d~~g~iD~~~L~~~i~~---~~~~taaV~it~P-n~~G~i~~---di~eI~~lah~~G~ll~vD~A~~~a 772 (1049)
.+..+|+ -|.+++++.+++ +.+++++|+++.. +.-|++.+ .++++.++|++||+++++|+++
T Consensus 196 ~~~~~~~~p~-----~d~~~~~~~l~~~~~~~~~vAavIvEpv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~--- 267 (442)
T TIGR03372 196 LLPGFHHVAF-----GDIEAMLKALNECKKTGDDVAAIILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQ--- 267 (442)
T ss_pred CCCCCEEeCC-----CCHHHHHHHHHHHhcCCCcEEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeecc---
Confidence 2344554 367888887753 4467899988754 44677652 2999999999999999999974
Q ss_pred ccCcCCCCcc--------CCcEEEeCCCcccccCCCCC-CCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCC
Q 001586 773 QVGLTSPGYI--------GADVCHLNLHKTFCIPHGGG-GPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIA 843 (1049)
Q Consensus 773 ~~gl~~Pg~~--------GaDi~~~s~hK~f~~P~g~G-GPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~ 843 (1049)
.|+.+.|.+ -+|++++ .|.+ ++| -|. |.+++++++...+..... ...
T Consensus 268 -tG~GRtG~~~a~e~~gv~PDivt~--gK~l----g~G~~Pi-gavv~~~~i~~~~~~~~~----------------~~~ 323 (442)
T TIGR03372 268 -TGMGRTGKMFACEHEGVQPDILCL--AKAL----GGGVMPI-GATIATEAVFSVLFDNPF----------------LHT 323 (442)
T ss_pred -cCCCccccchhhhhcCCCCCeeee--hhhh----cCCcccc-eEEEecHHHHHhhhccCc----------------ccc
Confidence 456666643 3688876 4766 344 254 445567666654421100 011
Q ss_pred ccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc---CC-ee--eccCCCceeeEEEEeccCccccCC
Q 001586 844 AAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YP-IL--FRGVNGTVAHEFIVDLRGLKNTAG 917 (1049)
Q Consensus 844 sa~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~---~~-v~--~~g~~g~~~~e~iv~~~~~~~~~g 917 (1049)
+++.|+++.++++.+.|..+.++++.+ +..+..++|.++|+++ +. .+ ..|. |. + +-+.+.. .
T Consensus 324 ~T~~gnp~~~Aaa~a~L~~i~~~~l~~---~~~~~G~~l~~~L~~l~~~~~~~i~~vRG~-Gl-~--~giel~~-----~ 391 (442)
T TIGR03372 324 TTFGGNPLACAAALATINELLEKNLPA---QAAIKGDFLLDGFQQLAAEYPDLIIEARGK-GL-L--MAIEFRD-----N 391 (442)
T ss_pred CCCCCCHHHHHHHHHHHHHHHhccHHH---HHHHHHHHHHHHHHHHHHhCCCceEEEecc-eE-E--EEEEeCC-----h
Confidence 224467777888888899887776554 4446778888888764 32 21 1221 22 2 2233221 1
Q ss_pred CCHHHHHHHHHHCCcccCCCCCCCCCEEEEEccCCCCHHHHHHHHHHHHHH
Q 001586 918 IEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISI 968 (1049)
Q Consensus 918 ~~~~~v~k~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~eeid~fv~aL~~i 968 (1049)
.....+.+.|.++|+.+.....+ .+.+|+.|+...|++|+|+++++|.+.
T Consensus 392 ~~~~~i~~~l~~~Gvl~~~~~~~-~~~lr~~Ppl~~t~~~id~~~~~l~~~ 441 (442)
T TIGR03372 392 EIGYAFAKELFQQNILVAGTLNN-AKSIRIEPPLTITIEQCALVIKAAKDA 441 (442)
T ss_pred HHHHHHHHHHHHCCcEEeecCCC-CCEEEEECCcccCHHHHHHHHHHHHHh
Confidence 12467889999999997533211 478999999999999999999999875
No 173
>PRK07482 hypothetical protein; Provisional
Probab=99.71 E-value=5.8e-15 Score=175.52 Aligned_cols=311 Identities=14% Similarity=0.164 Sum_probs=198.6
Q ss_pred HHHHHHHHHHHhhC--CCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEE-EcCCCCCccHHHHHhcC--------
Q 001586 633 MFNNLGEWLCTITG--FDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCG-------- 701 (1049)
Q Consensus 633 ~i~el~~~la~l~G--~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VL-ip~saHg~~pa~a~~~G-------- 701 (1049)
...++.+.|++++. ++. .++.+||+++++++++.+|.|...+|.++|++|| ...++||....+..+.|
T Consensus 95 ~~~~lAe~L~~~~p~~~~~-v~f~~sGSEAve~AlKlAr~~~~~~g~~~r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~~~ 173 (461)
T PRK07482 95 ASITLSKRIIDRAPAGMSK-VYYGLSGSDANETQIKLVWYYNNVLGRPEKKKIISRWRGYHGSGVVTGSLTGLSLFHQHF 173 (461)
T ss_pred HHHHHHHHHHHhCCCCcCE-EEEeCchHHHHHHHHHHHHHHHHhcCCCCCceEEEecCccCCccHhhhhccCCchhhhcc
Confidence 34578888999884 333 4678999999999999999887555655567777 57889997654332221
Q ss_pred ----CEEEEEcCCCC------C-------CCCHHHHHHHHHh-cCCCeEEEEEEcC-Cccccccc---cHHHHHHHHHHc
Q 001586 702 ----MKIVSVGTDAK------G-------NINIEELRKAAEA-NRDNLSTLMVTYP-STHGVYEE---GIDEICKIIHDN 759 (1049)
Q Consensus 702 ----~~Vv~V~~d~~------g-------~iD~~~L~~~i~~-~~~~taaV~it~P-n~~G~i~~---di~eI~~lah~~ 759 (1049)
-.+..++.... + .-|+++|++.+++ ..+++++|+++.. ...|++.+ .+++|.++|++|
T Consensus 174 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~ 253 (461)
T PRK07482 174 DLPIARVLHTEAPHYYRRADAGMSEEQFSAYCADELEELILAEGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKY 253 (461)
T ss_pred CCCCCCCEEcCCCccccccccCCCHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHh
Confidence 12233332211 1 1156888888853 3467999988764 34576642 589999999999
Q ss_pred CCEEEEeccccccccCcCCCCcc--------CCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCC
Q 001586 760 GGQVYMDGANMNAQVGLTSPGYI--------GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIP 831 (1049)
Q Consensus 760 G~ll~vD~A~~~a~~gl~~Pg~~--------GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~ 831 (1049)
|+++|+|++ +.|+.+.|.+ -+|++++ .|.++ +|...+|.+++++++.+.+.....
T Consensus 254 giLlI~DEV----~tGfGRtG~~~a~~~~gv~PDiv~~--gKgl~----gG~~Pi~av~~~~~i~~~~~~~~~------- 316 (461)
T PRK07482 254 DILLIADEV----VTGFGRLGSMFGSDHYGIEPDLITV--AKGLT----SAYAPLSGSIVGEKVWDVLEQGSD------- 316 (461)
T ss_pred CCEEEEecc----ccCCCcCcchhhHHhcCCCCCEEEE--ccccc----cCccccceeeecHHHHHHHhcccc-------
Confidence 999999986 5677777643 3699887 48763 443345666677776554321100
Q ss_pred CCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc---CCee--eccCCCceeeEEE
Q 001586 832 APEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFI 906 (1049)
Q Consensus 832 ~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~---~~v~--~~g~~g~~~~e~i 906 (1049)
..... ...+++.|+++.++++.+.|..+-++++.+. ..++.++|.++|+++ +.++ ..|. | .+..+-
T Consensus 317 ---~~~~~-~h~~T~~gnpl~~Aaa~a~L~~~~~~~l~~~---~~~~g~~l~~~L~~l~~~~~~v~~vrG~-G-lm~gie 387 (461)
T PRK07482 317 ---EHGAI-GHGWTYSGHPICAAAALANLDILERENLVGN---AAEVGAYFRARLRAAFGDHPLVGEVRGV-G-MLAAVE 387 (461)
T ss_pred ---cCCcc-ccCCCCCcCHHHHHHHHHHHHHHHhCCHHHH---HHHHHHHHHHHHHHHHhcCCCEEEEeec-e-eEEEEE
Confidence 00000 1112345688888899999999887775544 446778888888754 3322 2221 2 222221
Q ss_pred EeccCccccC-CC---CHHHHHHHHHHCCcccCCCCCCCCCEEEEEccCCCCHHHHHHHHHHHHHHHHHH
Q 001586 907 VDLRGLKNTA-GI---EPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEI 972 (1049)
Q Consensus 907 v~~~~~~~~~-g~---~~~~v~k~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~eeid~fv~aL~~i~~~i 972 (1049)
+.-+.-.+.. .. ....+.+.|.++|+.+... |.++.+++.|+..+|++|||+++++|.+.++++
T Consensus 388 l~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~--~~~~~i~~~Ppl~it~~ei~~~~~~l~~~l~~~ 455 (461)
T PRK07482 388 FVADRDDRTPFDPALKIGPQVSAAALERGVIARAM--PHGDILGFAPPLVLTRAEADEIVAIAKDAVDEV 455 (461)
T ss_pred eccCCCcCCCCChhhHHHHHHHHHHHHCCcEEecC--CCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 2111000000 00 1356888889999986422 124789999999999999999999999988775
No 174
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.70 E-value=3.1e-15 Score=177.36 Aligned_cols=294 Identities=19% Similarity=0.248 Sum_probs=194.8
Q ss_pred HHHHHHHHHHhhCCCc-cccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEE-EcCCCCCccHHHHHhcCCE--------
Q 001586 634 FNNLGEWLCTITGFDS-FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGMK-------- 703 (1049)
Q Consensus 634 i~el~~~la~l~G~~~-~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VL-ip~saHg~~pa~a~~~G~~-------- 703 (1049)
..++.+.|++++..+. ..++.+||+++++++++.+|.|...+| |.+|| ...++||....+....|-.
T Consensus 126 ~~~lae~L~~~~p~~~~~v~f~~SGsEAve~AlklAr~~t~~~g---r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~ 202 (459)
T PRK11522 126 RAMLAKTLAALTPGKLKYSFFCNSGTESVEAALKLAKAYQSPRG---KFTFIATSGAFHGKSLGALSATAKSTFRKPFMP 202 (459)
T ss_pred HHHHHHHHHHhCCCCCCEEEEeCCchHHHHHHHHHHHHHhccCC---CcEEEEecCCCCCCcHHHhhhcCCcccccCCCC
Confidence 4477888888875322 347789999999999999998753222 45566 5678999877664433311
Q ss_pred ----EEEEcCCCCCCCCHHHHHHHHHh---cCCCeEEEEEEcC-Cccccccc---cHHHHHHHHHHcCCEEEEecccccc
Q 001586 704 ----IVSVGTDAKGNINIEELRKAAEA---NRDNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNA 772 (1049)
Q Consensus 704 ----Vv~V~~d~~g~iD~~~L~~~i~~---~~~~taaV~it~P-n~~G~i~~---di~eI~~lah~~G~ll~vD~A~~~a 772 (1049)
+..+|+ .|.+++++++++ +.+++++|+++.. +..|++.+ .++++.++|++||+++++|+++
T Consensus 203 ~~~~~~~~~~-----~d~~~l~~~l~~~~~~~~~iAavIvEpv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~--- 274 (459)
T PRK11522 203 LLPGFRHVPF-----GNIEAMRTALSECKKTGDDVAAVILEPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQ--- 274 (459)
T ss_pred CCCCCcccCC-----CCHHHHHHHHHHhhccCCcEEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEeccce---
Confidence 223333 378899998864 3457888888765 45677763 2999999999999999999975
Q ss_pred ccCcCCCCcc--------CCcEEEeCCCcccccCCCCC-CCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCC
Q 001586 773 QVGLTSPGYI--------GADVCHLNLHKTFCIPHGGG-GPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIA 843 (1049)
Q Consensus 773 ~~gl~~Pg~~--------GaDi~~~s~hK~f~~P~g~G-GPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~ 843 (1049)
.|+.+.|.+ -+|++++ .|.+ |+| -|- |.+++++++...+..... ...
T Consensus 275 -tG~GRtG~~~a~e~~gv~PDivt~--gK~l----ggG~~Pi-gav~~~~~i~~~~~~~~~----------------~~~ 330 (459)
T PRK11522 275 -TGMGRTGKMFACEHENVQPDILCL--AKAL----GGGVMPI-GATIATEEVFSVLFDNPF----------------LHT 330 (459)
T ss_pred -ecCCccchhhhhhccCCCCCEEEe--chhh----hCCCccc-eeEEEcHHHHHHhccCCc----------------ccC
Confidence 455566543 3688866 4766 344 264 445555555443211100 011
Q ss_pred ccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc---CC-ee--eccCCCceeeEEEEeccCccccCC
Q 001586 844 AAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YP-IL--FRGVNGTVAHEFIVDLRGLKNTAG 917 (1049)
Q Consensus 844 sa~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~---~~-v~--~~g~~g~~~~e~iv~~~~~~~~~g 917 (1049)
+++.|+++.++++.+.|..+-.+++. ++..++.++|.++|+++ +. ++ ..|. |. + +-+.+.. .
T Consensus 331 ~T~~gnp~~~Aaala~L~~i~~~~l~---~~~~~~g~~l~~~L~~l~~~~~~~i~~VrG~-Gl-~--~giel~~-----~ 398 (459)
T PRK11522 331 TTFGGNPLACAAALATINVLLEQNLP---AQAEQKGDYLLDGFRQLAREYPDLVQEARGK-GM-L--MAIEFVD-----N 398 (459)
T ss_pred CCCCCCHHHHHHHHHHHHHHhcchHH---HHHHHHHHHHHHHHHHHHHhCCCceeeEEec-ee-E--EEEEecC-----c
Confidence 22456778888888999998776654 45567788999999875 33 21 1221 22 2 2233321 1
Q ss_pred CCHHHHHHHHHHCCcccCCCCCCCCCEEEEEccCCCCHHHHHHHHHHHHHHHHHHHHh
Q 001586 918 IEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQI 975 (1049)
Q Consensus 918 ~~~~~v~k~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~eeid~fv~aL~~i~~~i~~i 975 (1049)
.....+.+.|.++|+.+.... +-.+.+|++|+...|++|||+++++|.+++.++...
T Consensus 399 ~~~~~i~~~l~~~Gvl~~~~~-~~~~~lr~~Ppl~~t~~~id~~l~~l~~~l~~~~~~ 455 (459)
T PRK11522 399 EIGYNFASEMFRQRVLVAGTL-NNAKTIRIEPPLTLTIEQCEQVLKAARKALAAMRVS 455 (459)
T ss_pred hHHHHHHHHHHHCCeEEEecC-CCCCEEEEECCccCCHHHHHHHHHHHHHHHHHHHHh
Confidence 124678899999999975321 124789999999999999999999999998887653
No 175
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.70 E-value=2.3e-15 Score=175.57 Aligned_cols=273 Identities=20% Similarity=0.150 Sum_probs=186.7
Q ss_pred HHHHHHHHHHhCCCCcceEeccchHHHHHHHHHHhhhccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCcc---h
Q 001586 214 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK---D 290 (1049)
Q Consensus 214 ~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a~~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~~~---~ 290 (1049)
.++++.+|++.|.+. +.++.+|++++.++++++ .. +||+||+++..|+.+...+...++..|+++.+++.. +
T Consensus 64 ~~Le~~lA~l~G~~~--al~~~sG~~Ai~~~l~al-~~--~Gd~Vv~~~~~y~~~~~~~~~~~~~~gi~~~~~~~~d~~~ 138 (386)
T PRK06767 64 KLFEERMAVLEGGEE--ALAFGSGMAAISATLIGF-LK--AGDHIICSNGLYGCTYGFLEVLEEKFMITHSFCDMETEAD 138 (386)
T ss_pred HHHHHHHHHHhCCCc--EEEECCHHHHHHHHHHHH-hC--CCCEEEEcCCcHHHHHHHHHHHHhhcCeEEEEeCCCCHHH
Confidence 346789999999764 667788888777766665 23 889999999999999888877777789998887654 4
Q ss_pred hhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCCCC
Q 001586 291 IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGG 367 (1049)
Q Consensus 291 l~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~p~~~GaDivvgs~-k~lg~P~~~GG 367 (1049)
+++ +.++|++|++++| |++|.+.|+++|.++||++|++++|+ +.++.+....|.++|+|+++.|. |.|+++ |+
T Consensus 139 l~~~i~~~tklV~lesp~NptG~v~dl~~I~~la~~~g~~vivD-~a~a~~~~~~pl~~g~Div~~S~sK~l~g~---g~ 214 (386)
T PRK06767 139 IENKIRPNTKLIFVETPINPTMKLIDLKQVIRVAKRNGLLVIVD-NTFCSPYLQRPLELGCDAVVHSATKYIGGH---GD 214 (386)
T ss_pred HHHhhCcCceEEEEeCCCCCCceecCHHHHHHHHHHcCCEEEEE-CCCcccccCCchhcCCcEEEecCcceecCC---CC
Confidence 555 7788999999998 78999999999999999999999994 34555555667789999999998 777532 33
Q ss_pred CceEEEEEchhHHhcCCCceeeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcchHHHHH
Q 001586 368 PHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIA 447 (1049)
Q Consensus 368 P~~G~l~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irrekaTsni~t~~~l~a~~aa~y~~~~g~~Gl~~ia 447 (1049)
+-+|+++++++++.++-. ..|+.-|+. .+++ .++ +...+-+-+....
T Consensus 215 ~~gG~v~~~~~~i~~~~~------------------------~~~~~~g~~----~~~~---~a~--l~~~~L~tl~~r~ 261 (386)
T PRK06767 215 VVAGVTICKTRALAEKIR------------------------PMRKDIGGI----MAPF---DAW--LLLRGLKTLAVRM 261 (386)
T ss_pred ceeEEEEeChHHHHHHHH------------------------HHHHHhCCC----CCHH---HHH--HHHcCCCcHHHHH
Confidence 446899888776543200 001111110 0121 121 2333444455666
Q ss_pred HHHHHHHHHHHHHhhcCCCeEEcC-C----------CCcceEEEecCC----HHHHHHHHHHcCCeee------------
Q 001586 448 QRVHGLAGTFALGLKKLGTVEVQG-L----------PFFDTVKVKCAD----AHAIASAAYKIEMNLR------------ 500 (1049)
Q Consensus 448 ~~~~~~a~~l~~~L~~~g~~~v~~-~----------~~~~~v~i~~~~----~~~v~~~L~~~gI~~~------------ 500 (1049)
++..+++.++++.|+++.+++.+. + .....|+|.+++ +.++.++|...++.++
T Consensus 262 ~~~~~~a~~la~~L~~~p~v~~v~~p~~~~~~~~~~~~gg~vsf~l~~~~~~~~~f~~~l~~~~~~~s~G~~~sl~~~p~ 341 (386)
T PRK06767 262 DRHCDNAEKIVSFLKNHDAVEGVWYPEGELASRQMKRGGGVISFSIKGGKEETQAFINDLHFITIAVSLGDTETLIQHPA 341 (386)
T ss_pred HHHHHHHHHHHHHHHcCCCccEEECCCcHHHHHhCCCCCceEEEEEcCCHHHHHHHHHhCCccEEecCCCCcCccccCCC
Confidence 778999999999999985576432 1 112347777653 4577777766555321
Q ss_pred -----e----------ecCCeEEEEeccCCCHHHHHHHHHHHh
Q 001586 501 -----V----------VDSNTVTASFDETTTLEDVDKLFIVFA 528 (1049)
Q Consensus 501 -----~----------~~~~~vris~~~~~t~edid~lv~aL~ 528 (1049)
. +.++.||+|++.-+.++=|+.|-++|.
T Consensus 342 ~~~~~~~~~~~~~~~gi~~~l~R~svGlE~~~dl~~dl~~al~ 384 (386)
T PRK06767 342 TMTHAAIPAELRQEMGIYDNLIRLSVGLESWEDIVSDLEQALK 384 (386)
T ss_pred ccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHh
Confidence 0 123679999987665544555555553
No 176
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.70 E-value=8.5e-16 Score=176.44 Aligned_cols=280 Identities=17% Similarity=0.207 Sum_probs=183.3
Q ss_pred HHHHHHHHHhhCCCccccccCchH-HHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCEEEEEcCCCCC
Q 001586 635 NNLGEWLCTITGFDSFSLQPNAGA-AGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKG 713 (1049)
Q Consensus 635 ~el~~~la~l~G~~~~~l~~~sGa-~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~Vv~V~~d~~g 713 (1049)
.++++.+++++|.+...+..++|+ ++...++ +.+. .++++|+++...++.+...+...|++++.++.++++
T Consensus 57 ~~lr~~ia~~~~~~~~~i~~~~G~~~~l~~~~---~~l~-----~~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~~~~ 128 (346)
T TIGR01141 57 AELKQALADYYGVDPEQILLGNGSDEIIELLI---RAFL-----EPGDAVLVPPPTYSMYEISAKIHGAEVVKVPLDEDG 128 (346)
T ss_pred HHHHHHHHHHhCcChHHEEEcCCHHHHHHHHH---HHhc-----CCCCEEEEcCCCHHHHHHHHHHcCCeEEEeccCCCC
Confidence 378889999999766544444444 4443333 3221 246889998875544444567899999999998889
Q ss_pred CCCHHHHHHHHHhcCCCeEEEEEEcCC-ccccccccHHHHHHHHHHc--CCEEEEeccccccccCcCCC----CccCCcE
Q 001586 714 NINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDN--GGQVYMDGANMNAQVGLTSP----GYIGADV 786 (1049)
Q Consensus 714 ~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~~di~eI~~lah~~--G~ll~vD~A~~~a~~gl~~P----g~~GaDi 786 (1049)
.+|+++|+++++ +++++|++++|+ .+|.+. +++++.++++.+ |+++++|+++. .+..-..+ .....++
T Consensus 129 ~~d~~~l~~~~~---~~~~~v~l~~p~NptG~~~-~~~~~~~l~~~~~~~~~ii~D~~y~-~~~~~~~~~~~~~~~~~~i 203 (346)
T TIGR01141 129 QLDLEDILVAID---DKPKLVFLCSPNNPTGNLL-SRSDIEAVLERTPEDALVVVDEAYG-EFSGEPSTLPLLAEYPNLI 203 (346)
T ss_pred CCCHHHHHHhcC---CCCCEEEEeCCCCCCCCCC-CHHHHHHHHHhCCCCcEEEEECchh-hhcCCccHHHHHhhCCCEE
Confidence 999999999875 789999999995 699987 789999998877 99999999854 11111011 1122346
Q ss_pred EEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchh
Q 001586 787 CHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSK 866 (1049)
Q Consensus 787 ~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~e 866 (1049)
+..+++|+|+. +|+++|++++++++.+.+... . ...+.+ + ....++.+++... .
T Consensus 204 ~~~S~sK~~g~----~G~r~G~~~~~~~~~~~~~~~------------~--~~~~~~--~----~~~~~~~~~l~~~--~ 257 (346)
T TIGR01141 204 VLRTLSKAFGL----AGLRIGYAIANAEIIDALNKV------------R--APFNLS--R----LAQAAAIAALRDD--D 257 (346)
T ss_pred EEehhhHhhhc----hhhhceeeecCHHHHHHHHhc------------c--CCCCCC--H----HHHHHHHHHhCCH--H
Confidence 67888999853 367799999988766554211 0 001111 1 1122223333322 1
Q ss_pred hHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHHHCCcccCCC-CCC-CCCE
Q 001586 867 GLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTM-SWP-VPGT 944 (1049)
Q Consensus 867 Gl~~~~~~~~~~a~yL~~~L~~~~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~-~~p-~~~~ 944 (1049)
.+++..++..++.+++.+.|+++..+...+..+. -+.++++ + +..++.++|.++||.+... .|+ ..++
T Consensus 258 ~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~g~---~~~~~~~------~-~~~~~~~~L~~~gI~v~~g~~f~~~~~~ 327 (346)
T TIGR01141 258 FIEKTVEEINAERERLYDGLKKLPGLEVYPSDAN---FVLIRFP------R-DADALFEALLEKGIIVRDLNSYPGLPNC 327 (346)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCEECCCcCC---EEEEecC------C-CHHHHHHHHHHCCeEEEeCCCcCCCCCe
Confidence 3556666777888899999986422211121122 2445554 2 5688999999999987532 232 2589
Q ss_pred EEEEccCCCCHHHHHHHHHHHH
Q 001586 945 LMIEPTESESKEELDRYCDALI 966 (1049)
Q Consensus 945 lri~~t~~~t~eeid~fv~aL~ 966 (1049)
+|++++ +++|+++++++|+
T Consensus 328 iRls~~---~~~~i~~~~~~l~ 346 (346)
T TIGR01141 328 LRITVG---TREENDRFLAALR 346 (346)
T ss_pred EEEecC---CHHHHHHHHHHhC
Confidence 999975 7899999998873
No 177
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.70 E-value=5.6e-15 Score=174.02 Aligned_cols=300 Identities=15% Similarity=0.189 Sum_probs=196.4
Q ss_pred HHHHHHHHHHhhC--CCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEE-EcCCCCCccHHHHHhcC---------
Q 001586 634 FNNLGEWLCTITG--FDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCG--------- 701 (1049)
Q Consensus 634 i~el~~~la~l~G--~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VL-ip~saHg~~pa~a~~~G--------- 701 (1049)
..++.+.|++++. ++. .++.+||+++++++++.+|.|...+|.++|.+|| ...+.||..-.+....|
T Consensus 89 ~~~lae~L~~~~p~~~~~-v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~ 167 (429)
T PRK06173 89 AVELAQKLLEILPPSLNK-IFFADSGSVAVEVAMKMALQYQQAKGEVQRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLF 167 (429)
T ss_pred HHHHHHHHHhhCCCCcCE-EEEeCCchHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCCcchhhhccCCCchhhhhcc
Confidence 3478888998874 333 4778999999999999999987666655566776 67889996433221111
Q ss_pred ----CEEEEEcCCCC------CCCCHHHHHHHHHhcCCCeEEEEEEcC--Cccccccc---cHHHHHHHHHHcCCEEEEe
Q 001586 702 ----MKIVSVGTDAK------GNINIEELRKAAEANRDNLSTLMVTYP--STHGVYEE---GIDEICKIIHDNGGQVYMD 766 (1049)
Q Consensus 702 ----~~Vv~V~~d~~------g~iD~~~L~~~i~~~~~~taaV~it~P--n~~G~i~~---di~eI~~lah~~G~ll~vD 766 (1049)
-.+..+|.... ...+++.|++.++++.+++++|+++.. +..|++.+ .+++++++|++||+++++|
T Consensus 168 ~~~~~~~~~~~~p~~~~~~~~~~~~l~~l~~~i~~~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~D 247 (429)
T PRK06173 168 NHSLPVQYFLPQPSIKFGEEWNDEAIEPLQDLLEQKGDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFD 247 (429)
T ss_pred cccCCCCeEeCCCCcccchhHHHHHHHHHHHHHHhCCCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHcCCeEEec
Confidence 01234443211 112577788889766678999999863 34566642 5899999999999999999
Q ss_pred ccccccccCcCCCCcc--------CCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCC
Q 001586 767 GANMNAQVGLTSPGYI--------GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQP 838 (1049)
Q Consensus 767 ~A~~~a~~gl~~Pg~~--------GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~ 838 (1049)
+++ .|+.+.|.+ .+|++++ .|.+ ++|-.-++.+.+++++.+.+..... + .
T Consensus 248 Ev~----tG~GrtG~~~a~~~~gv~PDiv~~--gK~l----~gG~~p~~a~~~~~~i~~~~~~~~~----------~--~ 305 (429)
T PRK06173 248 EIA----TGFGRTGKLFALEHAGVVPDIMCI--GKAL----TGGYLTLSATITTEAIAQTICSGEA----------K--C 305 (429)
T ss_pred chh----cCCCcCCcchHHHhcCCCCCEEEe--ehhh----hCCccccceEEecHHHHHHHhcCCC----------C--c
Confidence 975 344454432 3688875 5876 3332445666677776655431100 0 0
Q ss_pred CCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc--CCee--eccCCCceeeEEEEeccCccc
Q 001586 839 LGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPIL--FRGVNGTVAHEFIVDLRGLKN 914 (1049)
Q Consensus 839 t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~--~~v~--~~g~~g~~~~e~iv~~~~~~~ 914 (1049)
. ...+++.|+++.++++.+.|..+-++++. ++..++.++|.++|++. +..+ ..| .|. +.. +.+..
T Consensus 306 ~-~~~~T~~g~p~~~aaa~a~l~~i~~~~~~---~~~~~~g~~l~~~L~~~~~~~~v~~vRg-~Gl-~~~--iel~~--- 374 (429)
T PRK06173 306 F-MHGPTFMANPLACAIAAESIRLLLESPWQ---QNIQRIEAQLKQELAPAAEFDSVAEVRV-LGA-IGV--VEMKE--- 374 (429)
T ss_pred c-ccCCCCCcCHHHHHHHHHHHHHHHhCCHH---HHHHHHHHHHHHHHHHhhcCCCeeeeec-cce-EEE--EEeCC---
Confidence 0 00112335677788888889888666553 45567788999998754 3322 112 122 222 23221
Q ss_pred cCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEccCCCCHHHHHHHHHHHHHHHHHHH
Q 001586 915 TAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIA 973 (1049)
Q Consensus 915 ~~g~~~~~v~k~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~eeid~fv~aL~~i~~~i~ 973 (1049)
......+.++|.++|+.+... ++.+++.|....|++|+|+++++|.+++.++.
T Consensus 375 --~~~~~~i~~~l~e~Gi~v~~~----g~~l~~~Ppl~it~~ei~~~~~~l~~~l~~~~ 427 (429)
T PRK06173 375 --PVNMATLQPRFVEHGIWVRPF----GKLVYIMPPFIISPDELSQLTSGLLRVLKQEY 427 (429)
T ss_pred --cccHHHHHHHHHHCCeEEEec----CCEEEEeCCccCCHHHHHHHHHHHHHHHHHHh
Confidence 124578999999999987533 37999999999999999999999999887643
No 178
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.70 E-value=2.3e-15 Score=175.67 Aligned_cols=274 Identities=16% Similarity=0.137 Sum_probs=186.1
Q ss_pred HHHHHHHHHHHHhCCCCcceEeccchHHHHHHHHHHhhhccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCcch-
Q 001586 212 SLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKD- 290 (1049)
Q Consensus 212 ~l~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a~~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~~~~- 290 (1049)
...++++.+|++.|.+. ..++.+|++++++++.. +. +||+||+++..|+++...+...++..|++++++|..+
T Consensus 55 ~~~~le~~lA~l~g~~~--~v~~~sG~~ai~~~l~~--l~--~Gd~Vlv~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~ 128 (390)
T PRK08064 55 TREALEDIIAELEGGTK--GFAFASGMAAISTAFLL--LS--KGDHVLISEDVYGGTYRMITEVLSRFGIEHTFVDMTNL 128 (390)
T ss_pred hHHHHHHHHHHHhCCCC--eEEECCHHHHHHHHHHH--hC--CCCEEEEccCccchHHHHHHHHHHHcCCEEEEECCCCH
Confidence 34567789999999874 45678888777655432 23 7899999999999988888777778899999998754
Q ss_pred --hhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCC
Q 001586 291 --IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGY 365 (1049)
Q Consensus 291 --l~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~p~~~GaDivvgs~-k~lg~P~~~ 365 (1049)
+++ ++++|++|++++| |++|.+.|+++|.++||++|++++|+. ..+.+....|.++|+|+++.|+ |.|++|.+
T Consensus 129 ~~l~~~l~~~tklV~l~~p~NptG~~~dl~~I~~la~~~g~~vvvD~-a~~~~~~~~~~~~g~Divv~S~tK~~~G~~~- 206 (390)
T PRK08064 129 EEVAQNIKPNTKLFYVETPSNPLLKVTDIRGVVKLAKAIGCLTFVDN-TFLTPLLQKPLDLGADVVLHSATKFLAGHSD- 206 (390)
T ss_pred HHHHHhcCCCceEEEEECCCCCCcEeccHHHHHHHHHHcCCEEEEEC-CCCcccccCchhhCCcEEEeecceeccCCcc-
Confidence 444 7789999999998 689999999999999999999999953 3444555556789999999998 66654422
Q ss_pred CCCceEEEEEch-hHHhcCCCceeeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcchHH
Q 001586 366 GGPHAAFLATSQ-EYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLK 444 (1049)
Q Consensus 366 GGP~~G~l~~~~-~l~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irrekaTsni~t~~~l~a~~aa~y~~~~g~~Gl~ 444 (1049)
--+|++++++ ++.+++... +.. .+++. .+. -+ |+...|-+-+.
T Consensus 207 --~laG~~v~~~~~~~~~l~~~-------------------------~~~---~g~~~-~~~---~a--~l~~~gl~tl~ 250 (390)
T PRK08064 207 --VLAGLAVVKDEELAQKLYFL-------------------------QNS---FGAVL-GVQ---DC--WLVLRGLKTLH 250 (390)
T ss_pred --ceeEEEEeCCHHHHHHHHHH-------------------------HHh---cCCCC-CHH---HH--HHHHcccCcHH
Confidence 1247777753 554443110 000 01110 011 11 12333444455
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCe-EEc-CC----C-----------CcceEEEecCCHHHHHHHHHHcCCe-----ee--
Q 001586 445 TIAQRVHGLAGTFALGLKKLGTV-EVQ-GL----P-----------FFDTVKVKCADAHAIASAAYKIEMN-----LR-- 500 (1049)
Q Consensus 445 ~ia~~~~~~a~~l~~~L~~~g~~-~v~-~~----~-----------~~~~v~i~~~~~~~v~~~L~~~gI~-----~~-- 500 (1049)
...++..+++..+++.|++.+.+ +++ .. + +...|+|.+.+..++.+.+...++. ++
T Consensus 251 ~R~~~~~~~a~~la~~L~~~~~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~sf~~~~~~~~~~f~~~l~l~~~~~s~G~~ 330 (390)
T PRK08064 251 VRLEHSSETANKIALYLQEHPKVQNVYYPGLQTHLGFDIQQSQATSAGAVLSFTLQSEEAVRQFVSHVKLPVFAVSLGAV 330 (390)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCcceEECCCCCCCccHHHHHHhCCCcceEEEEEECCHHHHHHHHHhCCcceEcccCCCC
Confidence 66677788888999999887533 232 11 1 1124777776544444444444551 11
Q ss_pred ---------------------e--ecCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001586 501 ---------------------V--VDSNTVTASFDETTTLEDVDKLFIVFAG 529 (1049)
Q Consensus 501 ---------------------~--~~~~~vris~~~~~t~edid~lv~aL~~ 529 (1049)
. +.++.||+|++..++++.|++|.++|..
T Consensus 331 ~sl~~~~~~~~h~~~~~~~~~~~gi~~~liR~SvGle~~~dli~dl~~Al~~ 382 (390)
T PRK08064 331 ESILSYPAKMSHAAMPKEERDERGITDGLLRLSVGLENVDDLIADFEQALSY 382 (390)
T ss_pred cceeECCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHh
Confidence 0 1247899999999999999999999974
No 179
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.70 E-value=5.5e-15 Score=172.77 Aligned_cols=306 Identities=16% Similarity=0.185 Sum_probs=189.3
Q ss_pred hcHHHHHHHHHHHHHHhhCC--Ccccc-ccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCEE
Q 001586 628 QGYQEMFNNLGEWLCTITGF--DSFSL-QPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKI 704 (1049)
Q Consensus 628 ~G~~~~i~el~~~la~l~G~--~~~~l-~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~V 704 (1049)
+|..++...+.+++.+..|. +...+ ..+++++|...++.++ . .++++|+++...|+.+...++..|.++
T Consensus 68 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~~---~-----~~gd~vl~~~p~y~~~~~~~~~~g~~~ 139 (393)
T PRK05764 68 AGIPELREAIAAKLKRDNGLDYDPSQVIVTTGAKQALYNAFMAL---L-----DPGDEVIIPAPYWVSYPEMVKLAGGVP 139 (393)
T ss_pred CChHHHHHHHHHHHHHHhCCCCCHHHEEEeCCcHHHHHHHHHHh---c-----CCCCEEEecCCCCcchHHHHHHcCCEE
Confidence 46555555666666555554 33333 4444555554333322 1 246789999988887777788899999
Q ss_pred EEEcCCCC--CCCCHHHHHHHHHhcCCCeEEEEEEcCC-cccccc--ccHHHHHHHHHHcCCEEEEeccccccc-cCcC-
Q 001586 705 VSVGTDAK--GNINIEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQ-VGLT- 777 (1049)
Q Consensus 705 v~V~~d~~--g~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~--~di~eI~~lah~~G~ll~vD~A~~~a~-~gl~- 777 (1049)
+.++.+.+ ..+|+++|+++++ +++++|++++|+ .+|.+- +++++|+++|+++|+++++|.++.... .+..
T Consensus 140 ~~~~~~~~~~~~~d~~~l~~~l~---~~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~ 216 (393)
T PRK05764 140 VFVPTGEENGFKLTVEQLEAAIT---PKTKALILNSPSNPTGAVYSPEELEAIADVAVEHDIWVLSDEIYEKLVYDGAEF 216 (393)
T ss_pred EEEecCcccCCcCCHHHHHHhhC---ccceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEeccccceeeCCCCc
Confidence 99998743 5789999999996 688899999995 589873 269999999999999999998763211 1110
Q ss_pred -C-----CCccCCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHH
Q 001586 778 -S-----PGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSAL 851 (1049)
Q Consensus 778 -~-----Pg~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~ 851 (1049)
. +...+.++++.++.|+|+.| |.++|+++.++++...+... ....+.+++ +..+
T Consensus 217 ~~~~~~~~~~~~~~i~~~s~SK~~~~~----G~RiG~i~~~~~~~~~~~~~------------~~~~~~~~~--~~~q-- 276 (393)
T PRK05764 217 TSIASLSPELRDRTITVNGFSKAYAMT----GWRLGYAAGPKELIKAMSKL------------QSHSTSNPT--SIAQ-- 276 (393)
T ss_pred ccHHHcCCCCcCCEEEEecCcccccCc----cceeEEEecCHHHHHHHHHH------------HhhcccCCC--hHHH--
Confidence 0 12234578888889988644 56789999887766543210 000011111 1111
Q ss_pred HHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHH-HC
Q 001586 852 ILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-DY 930 (1049)
Q Consensus 852 ~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~-~~ 930 (1049)
.++...+.. ..+-+.+..+...++.+++.+.|+++-.+.+..+.+.++ +.++++......+.+..++.+.|. ++
T Consensus 277 --~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~~ 351 (393)
T PRK05764 277 --YAAVAALNG-PQDEVEEMRQAFEERRDLMVDGLNEIPGLECPKPEGAFY--VFPNVSKLLGKSITDSLEFAEALLEEA 351 (393)
T ss_pred --HHHHHHHcC-ChHHHHHHHHHHHHHHHHHHHHHhhCCCCcccCCCcceE--EEEecccccccccCCHHHHHHHHHHhC
Confidence 112222221 223344455556667888889998751222222233222 234544211111223578888775 57
Q ss_pred CcccC-CCCCCCCCEEEEEccCCCCHHHHHHHHHHHHHHHHH
Q 001586 931 GFHGP-TMSWPVPGTLMIEPTESESKEELDRYCDALISIREE 971 (1049)
Q Consensus 931 Gi~~~-~~~~p~~~~lri~~t~~~t~eeid~fv~aL~~i~~~ 971 (1049)
||.+. ...|+..+++|+++.. ++++++++++.|.+++++
T Consensus 352 gi~v~~g~~f~~~~~vRis~~~--~~~~~~~~i~~l~~~~~~ 391 (393)
T PRK05764 352 GVAVVPGIAFGAPGYVRLSYAT--SLEDLEEGLERIERFLES 391 (393)
T ss_pred CEEEccccccCCCCEEEEEecC--CHHHHHHHHHHHHHHHHh
Confidence 99864 3445556899999864 689999999999887654
No 180
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.70 E-value=9.2e-15 Score=169.71 Aligned_cols=210 Identities=19% Similarity=0.200 Sum_probs=152.5
Q ss_pred HHHHHHHHHhCCCCcceEeccchHHHHHHHHHHhhhccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc---chh
Q 001586 215 NFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---KDI 291 (1049)
Q Consensus 215 e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a~~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~~---~~l 291 (1049)
++++.+|+|.|.+ ++.++.+|++++.++++++ .. +||+||+++..|+.+...+....+.+|+++.+++. +++
T Consensus 65 ~Le~~iA~le~~~--~~~~~~sG~~Ai~~~l~al-l~--~GD~Vvv~~~~Y~~t~~l~~~~l~~~Gi~v~~v~~~~~e~l 139 (394)
T PRK09028 65 AFQAAIVELEGGA--GTALYPSGAAAISNALLSF-LK--AGDHLLMVDSCYEPTRDLCDKILKGFGIETTYYDPMIGEGI 139 (394)
T ss_pred HHHHHHHHHhCCC--cEEEECCHHHHHHHHHHHH-hC--CCCEEEEECCCcHHHHHHHHHhhhhcceEEEEECCCCHHHH
Confidence 4668999999875 4789999998888877765 33 89999999999988888765555678999998876 346
Q ss_pred hc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCCCCC
Q 001586 292 DY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGGP 368 (1049)
Q Consensus 292 ~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~p~~~GaDivvgs~-k~lg~P~~~GGP 368 (1049)
++ ++++|++|++++| |++|.+.|+++|+++||++|++++|+ +.++.+....|.++||||+++|+ |++++| |.-
T Consensus 140 ~~~l~~~TklV~lespsNPtg~v~dl~~I~~la~~~g~~lvvD-~t~a~p~~~~Pl~~GaDivv~S~tK~l~Gh---~d~ 215 (394)
T PRK09028 140 RELIRPNTKVLFLESPGSITMEVQDVPTLSRIAHEHDIVVMLD-NTWASPINSRPFEMGVDISIQAATKYIVGH---SDV 215 (394)
T ss_pred HHhcCcCceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEE-CCccccccCCccccCceEEEEeCCeEecCC---CCE
Confidence 66 7889999999998 78999999999999999999999994 45666777788999999999999 776543 111
Q ss_pred ceEEEEEchhHHhcCCCceeeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcchHHHHHH
Q 001586 369 HAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQ 448 (1049)
Q Consensus 369 ~~G~l~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irrekaTsni~t~~~l~a~~aa~y~~~~g~~Gl~~ia~ 448 (1049)
-+|.++.++++.+++- ..++.-|. + .++. ..|+...|-+-|.-..+
T Consensus 216 ~~G~~~~~~~~~~~l~-------------------------~~~~~~G~--~--~~p~-----~a~l~~rgl~TL~lR~~ 261 (394)
T PRK09028 216 MLGTATANEKHWDQLR-------------------------EHSYLMGQ--C--TSPD-----DVYLAMRGLRTLGVRLA 261 (394)
T ss_pred EEEEEECCHHHHHHHH-------------------------HHHHhcCC--C--CCHH-----HHHHHHcccCcHHHHHH
Confidence 2455554544433220 00010010 0 0111 12345555555666677
Q ss_pred HHHHHHHHHHHHhhcCCCe
Q 001586 449 RVHGLAGTFALGLKKLGTV 467 (1049)
Q Consensus 449 ~~~~~a~~l~~~L~~~g~~ 467 (1049)
+..++|..+++.|++...+
T Consensus 262 ~~~~na~~la~~L~~~p~v 280 (394)
T PRK09028 262 QHEKNALKVANWLATRPEV 280 (394)
T ss_pred HHHHHHHHHHHHHhcCCCc
Confidence 7889999999999987534
No 181
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.70 E-value=3.8e-15 Score=173.39 Aligned_cols=300 Identities=14% Similarity=0.139 Sum_probs=189.3
Q ss_pred hhcHHHHHHHHHHHHHHhhC--CCccccc-cCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCE
Q 001586 627 AQGYQEMFNNLGEWLCTITG--FDSFSLQ-PNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMK 703 (1049)
Q Consensus 627 ~~G~~~~i~el~~~la~l~G--~~~~~l~-~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~ 703 (1049)
.+|..++...+.+++.+.+| .+...+. .+++++|...+ ++.+. .++++|+++...|..+...++..|++
T Consensus 60 ~~G~~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~al~~~---~~~l~-----~~gd~vl~~~p~y~~~~~~~~~~g~~ 131 (382)
T PRK06108 60 NLGIPELREALARYVSRLHGVATPPERIAVTSSGVQALMLA---AQALV-----GPGDEVVAVTPLWPNLVAAPKILGAR 131 (382)
T ss_pred CCCCHHHHHHHHHHHHHHhCCCcCcceEEEeCChHHHHHHH---HHHhc-----CCCCEEEEeCCCccchHHHHHHCCCE
Confidence 35777777788888888888 4433443 44445444332 33221 25678999888887777778899999
Q ss_pred EEEEcCCCC---CCCCHHHHHHHHHhcCCCeEEEEEEcCC-cccccc--ccHHHHHHHHHHcCCEEEEeccccccccC--
Q 001586 704 IVSVGTDAK---GNINIEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQVG-- 775 (1049)
Q Consensus 704 Vv~V~~d~~---g~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~--~di~eI~~lah~~G~ll~vD~A~~~a~~g-- 775 (1049)
++.+|.+.+ +.+|+++|++.++ +++++|++++|+ .+|.+- +++++|+++|+++|+++++|.++..-..+
T Consensus 132 ~~~v~~~~~~~~~~~d~~~l~~~~~---~~~~~i~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~ 208 (382)
T PRK06108 132 VVCVPLDFGGGGWTLDLDRLLAAIT---PRTRALFINSPNNPTGWTASRDDLRAILAHCRRHGLWIVADEVYERLYYAPG 208 (382)
T ss_pred EEEeeCCCCCCCccCCHHHHHHhcC---ccceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEehhhhhhccCCC
Confidence 999998643 4699999999986 688999999994 589664 25899999999999999999985321111
Q ss_pred cCCCC--c----cCCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhh
Q 001586 776 LTSPG--Y----IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGS 849 (1049)
Q Consensus 776 l~~Pg--~----~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~ 849 (1049)
-..|. . ..-.+++.+++|+|+.| |.++|++++++++...+... . ...+.+++ .
T Consensus 209 ~~~~~~~~~~~~~~~~i~~~S~SK~~g~~----G~RiG~~~~~~~~~~~~~~~-~-----------~~~~~~~~--~--- 267 (382)
T PRK06108 209 GRAPSFLDIAEPDDRIIFVNSFSKNWAMT----GWRLGWLVAPPALGQVLEKL-I-----------EYNTSCVA--Q--- 267 (382)
T ss_pred CCCCCHhhcCCCcCCEEEEeechhhccCc----ccceeeeeCCHHHHHHHHHH-H-----------HhcccCCC--h---
Confidence 01111 0 12347788899988533 67799999987665543210 0 00011111 1
Q ss_pred HHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHH-
Q 001586 850 ALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM- 928 (1049)
Q Consensus 850 ~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~- 928 (1049)
....++...+. .+.+-+++..++..++.+++.+.|+++..+.+..+++..+ +.++++. ..+..+++++|.
T Consensus 268 -~~q~a~~~~l~-~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~g~~--~~~~l~~-----~~~~~~~~~~ll~ 338 (382)
T PRK06108 268 -FVQRAAVAALD-EGEDFVAELVARLRRSRDHLVDALRALPGVEVAKPDGAMY--AFFRIPG-----VTDSLALAKRLVD 338 (382)
T ss_pred -HHHHHHHHHHh-CChHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCeeEE--EEEeCCC-----CCCHHHHHHHHHH
Confidence 11112222332 2333455566667777888989887642222212222221 3455542 235678888875
Q ss_pred HCCcccC-CCCCC--CCCEEEEEccCCCCHHHHHHHHHHHHHHH
Q 001586 929 DYGFHGP-TMSWP--VPGTLMIEPTESESKEELDRYCDALISIR 969 (1049)
Q Consensus 929 ~~Gi~~~-~~~~p--~~~~lri~~t~~~t~eeid~fv~aL~~i~ 969 (1049)
++||.+. ...|. ..+++|++++. +.++++..++.|++++
T Consensus 339 ~~gV~v~pg~~f~~~~~~~~Ris~~~--~~~~l~~~l~~l~~~l 380 (382)
T PRK06108 339 EAGLGLAPGTAFGPGGEGFLRWCFAR--DPARLDEAVERLRRFL 380 (382)
T ss_pred hCCEEEeCchhhCCCCCCEEEEEecC--CHHHHHHHHHHHHHHH
Confidence 5799863 32232 25799999987 7888998888887754
No 182
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.70 E-value=6e-15 Score=172.89 Aligned_cols=279 Identities=20% Similarity=0.270 Sum_probs=187.0
Q ss_pred HHHHHHHHHhhCCC--ccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEE-EcCCCCCccHHHHHhcCC---------
Q 001586 635 NNLGEWLCTITGFD--SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGM--------- 702 (1049)
Q Consensus 635 ~el~~~la~l~G~~--~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VL-ip~saHg~~pa~a~~~G~--------- 702 (1049)
.++++++++++|.+ ...+..++|++++++++++++.+ | +++|| +..+.||.........|.
T Consensus 88 ~~la~~l~~~~~~~~~~~v~~~~sgsea~~~al~~~~~~----g---~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~ 160 (398)
T PRK03244 88 IALAERLVELLGAPEGGRVFFCNSGAEANEAAFKLARLT----G---RTKIVAAEGGFHGRTMGALALTGQPAKRAPFEP 160 (398)
T ss_pred HHHHHHHHHhCCCCCCCEEEEeCchHHHHHHHHHHHHHH----C---CCeEEEECCCcCCccHHHHhccCCcccccCCCC
Confidence 37888999998854 23467788998888777766542 2 34455 446788876665433332
Q ss_pred ---EEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-Ccccccccc---HHHHHHHHHHcCCEEEEeccccccccC
Q 001586 703 ---KIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEG---IDEICKIIHDNGGQVYMDGANMNAQVG 775 (1049)
Q Consensus 703 ---~Vv~V~~d~~g~iD~~~L~~~i~~~~~~taaV~it~P-n~~G~i~~d---i~eI~~lah~~G~ll~vD~A~~~a~~g 775 (1049)
+++.+|. .|+++|+++++ +++++|+++.+ |.+|.+.++ +++|.++|++||+++++|+++. +
T Consensus 161 ~~~~~~~~~~-----~d~~~l~~~~~---~~~~aviiep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~----g 228 (398)
T PRK03244 161 LPGGVEHVPY-----GDVDALAAAVD---DDTAAVFLEPIQGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQT----G 228 (398)
T ss_pred CCCCceEeCC-----CCHHHHHHhhc---CCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc----C
Confidence 2344443 48999999886 68999999887 568887633 8999999999999999999863 3
Q ss_pred cCCCC--------ccCCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccch
Q 001586 776 LTSPG--------YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPW 847 (1049)
Q Consensus 776 l~~Pg--------~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~ 847 (1049)
+.+.| ...+|++++ .|+|+ ||-.+|++++++++...+.... + + +++.
T Consensus 229 ~gr~g~~~~~~~~~~~pDi~t~--sK~l~-----~G~~ig~~~~~~~~~~~~~~~~---------~------~---~t~~ 283 (398)
T PRK03244 229 IGRTGAWFAHQHDGVTPDVVTL--AKGLG-----GGLPIGACLAFGPAADLLTPGL---------H------G---STFG 283 (398)
T ss_pred CcccchHHhhhhhCCCCCEEEE--chhhh-----CCcccEEEEEcHHHHhhccCCC---------C------c---CCCC
Confidence 33232 124788776 58884 3456888888877665542110 0 0 0112
Q ss_pred hhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc-CCee--eccCCCceeeEEEEeccCccccCCCCHHHHH
Q 001586 848 GSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPIL--FRGVNGTVAHEFIVDLRGLKNTAGIEPEDVA 924 (1049)
Q Consensus 848 g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~-~~v~--~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~ 924 (1049)
++++.+.++.++|..+..+.+. ++..++.++|.+.|++. +.+. ..+ .|. + +.+.++. .....+.
T Consensus 284 ~~~~~~aaa~a~l~~~~~~~~~---~~~~~~~~~l~~~L~~~~~~~~~~v~g-~g~-~--~~i~~~~------~~~~~~~ 350 (398)
T PRK03244 284 GNPVACAAALAVLDTIASEGLL---ENAERLGEQLRAGIEALGHPLVDHVRG-RGL-L--LGIVLTA------PVAKAVE 350 (398)
T ss_pred CCHHHHHHHHHHHHHHHhccHH---HHHHHHHHHHHHHHHhcCCCceeeEee-ccE-E--EEEEEec------cHHHHHH
Confidence 3455666777887777655443 44556678899999874 3221 112 121 1 3333321 1456889
Q ss_pred HHHHHCCcccCCCCCCCCCEEEEEccCCCCHHHHHHHHHHHHHHHHHHH
Q 001586 925 KRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIA 973 (1049)
Q Consensus 925 k~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~eeid~fv~aL~~i~~~i~ 973 (1049)
++|.++|+.+.... .+++|++|+..++++|||+++++|++++.+++
T Consensus 351 ~~l~~~Gv~~~~~~---~~~iR~~p~~~~t~~~i~~~~~~l~~~l~~~~ 396 (398)
T PRK03244 351 AAAREAGFLVNAVA---PDVIRLAPPLIITDAQVDAFVAALPAILDAAA 396 (398)
T ss_pred HHHHHCCeEEeecC---CCEEEEECCCcCCHHHHHHHHHHHHHHHHhcc
Confidence 99999999875432 37899999999999999999999999887643
No 183
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.69 E-value=8.7e-15 Score=170.97 Aligned_cols=289 Identities=19% Similarity=0.224 Sum_probs=186.8
Q ss_pred HHHHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEE-EcCCCCCccHHHHHhcCCEEE---EEc
Q 001586 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGMKIV---SVG 708 (1049)
Q Consensus 633 ~i~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VL-ip~saHg~~pa~a~~~G~~Vv---~V~ 708 (1049)
...++.+++++..+.+. .++.+||++++++++.++|.|... +.++|++|| ...+.||..-......|.... ..|
T Consensus 79 ~~~~la~~l~~~~~~~~-v~f~~SGseA~e~Aik~ar~~~~~-~~~~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~ 156 (395)
T PRK03715 79 PMAKLAGLLTQHSCFDK-VFFANSGAEANEGAIKLARKWGRK-HKNGAYEIITFDHSFHGRTLATMSASGKPGWDTIFAP 156 (395)
T ss_pred HHHHHHHHHhhccCCCE-EEEeCCcHHHHHHHHHHHHHHhhc-cCCCCcEEEEECCCcCCChHHHHhhcCCcccccCCCC
Confidence 34577788888776655 477899999999999999887532 222345555 677899987666555443211 111
Q ss_pred CCCC----CCCCHHHHHHHHHhcCCCeEEEEEEcCC-ccccccc---cHHHHHHHHHHcCCEEEEeccccccccCcCCCC
Q 001586 709 TDAK----GNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPG 780 (1049)
Q Consensus 709 ~d~~----g~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~~---di~eI~~lah~~G~ll~vD~A~~~a~~gl~~Pg 780 (1049)
.... ...|+++|+++++ +++++|+++... ..|++.+ .+++|.++|+++|+++++|+++ .|+.+.|
T Consensus 157 ~~~~~~~~~~~d~~~l~~~l~---~~~aavi~Epv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~----tG~GRtG 229 (395)
T PRK03715 157 QVPGFPKAELNDIASVEKLIT---DKTVAVMLEPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQ----TGCGRTG 229 (395)
T ss_pred CCCCceeeCCchHHHHHHHcC---CCceEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccc----cCCCCCc
Confidence 1111 1257899999886 689999888654 4677652 2999999999999999999974 3455555
Q ss_pred cc--------CCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHH
Q 001586 781 YI--------GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALI 852 (1049)
Q Consensus 781 ~~--------GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~ 852 (1049)
.+ .+|++++ .|.++ +|.| +|.+++++++..+.++. ..+++.|+++.
T Consensus 230 ~~~a~~~~gv~PDi~t~--gK~lg----~G~p-~~av~~~~~i~~~~~~~-------------------~~~T~~g~pl~ 283 (395)
T PRK03715 230 TLFAYELSGIEPDIMTL--GKGIG----GGVP-LAALLAKAEVAVFEAGD-------------------QGGTYNGNPLM 283 (395)
T ss_pred chhhHhhcCCCCceeee--hhhhh----CCcc-eEEEEEccccccccCCC-------------------cCCCCCCCHHH
Confidence 32 4688777 48774 3445 55566777765433221 01112345667
Q ss_pred HHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc---CCee-eccCCCceeeEEEEeccCccccCCCCHHHHHHHHH
Q 001586 853 LPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPIL-FRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM 928 (1049)
Q Consensus 853 ~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~---~~v~-~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~ 928 (1049)
++++.+.|..+.++++. ++..++.++|.++|+++ +.+. ..|. | .+ +-+.+.. .....+.+.+.
T Consensus 284 ~aaala~L~~l~~~~l~---~~~~~~g~~l~~~L~~l~~~~~i~~vrG~-G-lm--~~i~l~~------~~~~~~~~~~~ 350 (395)
T PRK03715 284 TAVGVAVISQLLAPGFL---EGVRARGEYLKEKLLELSEERGLEGERGE-G-LL--RALLLGK------DIGPQIVEKAR 350 (395)
T ss_pred HHHHHHHHHHHHhccHH---HHHHHHHHHHHHHHHHHhhcCCcCeEEcc-e-eE--EEEEecC------chHHHHHHHHH
Confidence 77788888888665544 45567788999998864 2221 1221 2 22 2233321 11234444444
Q ss_pred H---CCcccCCCCCCCCCEEEEEccCCCCHHHHHHHHHHHHHHHHHH
Q 001586 929 D---YGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEI 972 (1049)
Q Consensus 929 ~---~Gi~~~~~~~p~~~~lri~~t~~~t~eeid~fv~aL~~i~~~i 972 (1049)
+ +|+.+.... ++++|++|+..+|++|||+++++|.++++++
T Consensus 351 ~~~~~Gi~~~~~~---~~~lR~~p~l~~t~~ei~~~~~~l~~~l~~~ 394 (395)
T PRK03715 351 DMQPDGLLLNAPR---PNLLRFMPALNVTTEEIDQMIAMLRSVLDKL 394 (395)
T ss_pred hccCCCEEEeecC---CCEEEEeCCcccCHHHHHHHHHHHHHHHHhh
Confidence 4 498875332 4789999999999999999999999887653
No 184
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.69 E-value=8.1e-15 Score=171.27 Aligned_cols=288 Identities=20% Similarity=0.250 Sum_probs=185.9
Q ss_pred HHHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEE-EcCCCCCccHHHHHhcCCEEEE---EcC
Q 001586 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGMKIVS---VGT 709 (1049)
Q Consensus 634 i~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VL-ip~saHg~~pa~a~~~G~~Vv~---V~~ 709 (1049)
..+++++|+++++.+. .++.+||++|++++++++|.|+..+|.++|++|| ...+.||.........+..... .|.
T Consensus 75 ~~~la~~l~~~~~~~~-v~~~~sGseA~~~al~~ar~~~~~~G~~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~ 153 (389)
T PRK01278 75 QERLAERLVENSFADK-VFFTNSGAEAVECAIKTARRYHYGKGHPERYRIITFEGAFHGRTLATIAAGGQEKYLEGFGPL 153 (389)
T ss_pred HHHHHHHHHhhCCCCE-EEEcCCcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCcHHHHhccCChhhcccCCCC
Confidence 4478889999987665 4677899999999999999887666654566777 4567888776664443332111 011
Q ss_pred CCCC----CCCHHHHHHHHHhcCCCeEEEEEEcCC-cccccc---ccHHHHHHHHHHcCCEEEEeccccccccCcCCCCc
Q 001586 710 DAKG----NINIEELRKAAEANRDNLSTLMVTYPS-THGVYE---EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGY 781 (1049)
Q Consensus 710 d~~g----~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~---~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~Pg~ 781 (1049)
..+. ..|+++++++++ +++++|+++.++ ..|.+. +++++|+++|++||+++++|+++. |+.+.|.
T Consensus 154 ~~~~~~~~~~d~~~l~~~l~---~~~~avivep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~----g~g~~g~ 226 (389)
T PRK01278 154 VPGFDQVPFGDIEALKAAIT---PNTAAILIEPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQC----GMGRTGK 226 (389)
T ss_pred CCCceEeCCCCHHHHHHhhC---CCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc----CCCcCCc
Confidence 1111 158999999997 689999998664 456332 369999999999999999999864 3333221
Q ss_pred --------cCCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHH
Q 001586 782 --------IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALIL 853 (1049)
Q Consensus 782 --------~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~ 853 (1049)
..+|++++ .|.++ +|..+|++++++++.+.+.... + ....+ +++..+
T Consensus 227 ~~~~~~~~~~pdi~t~--sK~l~-----~G~~ig~~~~~~~~~~~~~~~~---------~-----~~t~~----~~~~~~ 281 (389)
T PRK01278 227 LFAHEWAGVTPDIMAV--AKGIG-----GGFPLGACLATEEAAKGMTPGT---------H-----GSTYG----GNPLAM 281 (389)
T ss_pred ceeecccCCCCCEEEE--ehhcc-----CCcceEEEEEcHHHHhccCCCC---------C-----CCCCC----ccHHHH
Confidence 23577655 58774 4567888888887766542110 0 01111 234445
Q ss_pred HHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc---CC-eee--ccCCCceeeEEEEeccCccccCCCCHHHHHHHH
Q 001586 854 PISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YP-ILF--RGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRL 927 (1049)
Q Consensus 854 ~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~---~~-v~~--~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L 927 (1049)
+++.+.|..+-.+++. ++...+.+++.++|+++ +. +.. .+ .|.. +.+.+. .+..+++++|
T Consensus 282 aaa~a~l~~l~~~~~~---~~~~~~~~~l~~~l~~l~~~~~~~~~~v~g-~G~~---~~i~~~-------~~~~~~~~~l 347 (389)
T PRK01278 282 AVGNAVLDVILAPGFL---DNVQRMGLYLKQKLEGLVDRFPDVIEEVRG-KGLL---LGLKCV-------VPNRDLVQAL 347 (389)
T ss_pred HHHHHHHHHHhhhHHH---HHHHHHHHHHHHHHHHHHhhCCCceeeEec-ccEE---EEEEEe-------cCHHHHHHHH
Confidence 5566666666444433 33445667777777653 22 211 11 1211 223332 2467899999
Q ss_pred HHCCcccCCCCCCCCCEEEEEccCCCCHHHHHHHHHHHHHHHHH
Q 001586 928 MDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREE 971 (1049)
Q Consensus 928 ~~~Gi~~~~~~~p~~~~lri~~t~~~t~eeid~fv~aL~~i~~~ 971 (1049)
.++|+.+.... .+.+|++|+...++++|+++++.|++++++
T Consensus 348 ~~~GV~~~p~~---~~~lR~~p~~~~~~~~i~~~l~~l~~~l~~ 388 (389)
T PRK01278 348 RDEGLLTVGAG---DNVVRLLPPLIITEEEIDEALERLERAAES 388 (389)
T ss_pred HHCCeEEeecC---CCEEEEeCCcccCHHHHHHHHHHHHHHHHh
Confidence 99999863222 378999999889999999999999887643
No 185
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.69 E-value=4.3e-15 Score=173.60 Aligned_cols=315 Identities=15% Similarity=0.157 Sum_probs=196.7
Q ss_pred ccccccCCCCCCCCCcHHHHHHHHhCCccccccCCChhhHhhhHHHHHHHHHHHHHHHhCCCCcceEeccchHHHHHHHH
Q 001586 166 VYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMA 245 (1049)
Q Consensus 166 ~~~~~lG~g~y~~~~p~~i~~~~~~~~~~~t~ytpyq~e~sqg~le~l~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~ 245 (1049)
.+-+|.+..+.++..|+.+.+.+.+.-.-+ .+....+...+|..+...++++.+++++|.+ .++ ++.+|+.+.++++
T Consensus 43 ~~i~l~~~~~~~~~~~~~i~~a~~~~~~~~-~~~~~~~~~~~G~~~l~~~l~~~la~~~g~~-~~i-~~tsG~~a~~~~~ 119 (397)
T PRK06939 43 EVINFCANNYLGLANHPELIAAAKAALDSH-GFGMASVRFICGTQDLHKELEEKLAKFLGTE-DAI-LYSSCFDANGGLF 119 (397)
T ss_pred eEEEeeccCccccCCCHHHHHHHHHHHHHc-CCCCcccccccCCcHHHHHHHHHHHHHhCCC-cEE-EEcChHHHHHHHH
Confidence 344555443344545655544444321100 1221223356787777888899999999976 344 4555566666655
Q ss_pred HHhhhccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEe---Ccchhhc-cC----C--CEeEEEEEcC-CCCeeecc
Q 001586 246 MCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVS---DLKDIDY-KS----G--DVCGVLVQYP-GTEGEVLD 314 (1049)
Q Consensus 246 ~a~~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v---~~~~l~~-l~----~--~t~~V~v~~p-n~~G~i~d 314 (1049)
.++ . ++||+|++++..||++...++. .|.+++.+ +++++++ +. + ++++|++... |.+|.+.|
T Consensus 120 ~~l-~--~~gd~vi~~~~~~~~~~~~~~~----~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~~G~~~~ 192 (397)
T PRK06939 120 ETL-L--GKEDAIISDALNHASIIDGVRL----CKAKRYRYANNDMADLEAQLKEAKEAGARHKLIATDGVFSMDGDIAP 192 (397)
T ss_pred HHh-C--CCCCEEEEEhhhhHHHHHHHHh----cCCceEEeCCCCHHHHHHHHHhhhccCCCCeEEEEecCcCCCCCcCC
Confidence 543 2 3899999999999999887753 24444444 4455554 43 3 6777776543 67899999
Q ss_pred HHHHHHHHHhCCcEEEEEeccccccCCCCCC---------cccceEEEecC-ccccccCCCCCCceEEEEEchhHHhcCC
Q 001586 315 YGDFIKNAHANGVKVVMATDLLALTILKPPG---------ELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMP 384 (1049)
Q Consensus 315 i~~I~~~ah~~galliV~a~~~alg~l~~p~---------~~GaDivvgs~-k~lg~P~~~GGP~~G~l~~~~~l~~~lp 384 (1049)
+++|.++|+++|++++++ +..+.+.+...+ ..++||+++|. |.|++ +..|++++++++++.+-
T Consensus 193 ~~~l~~la~~~~~~li~D-e~~~~g~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~g------~r~G~v~~~~~~~~~l~ 265 (397)
T PRK06939 193 LPEICDLADKYDALVMVD-DSHAVGFVGENGRGTVEHFGVMDRVDIITGTLGKALGG------ASGGYTAGRKEVIDWLR 265 (397)
T ss_pred HHHHHHHHHHhCCEEEEE-CcccccCcCCCCCCHHHHcCCCCCCcEEEEECHHHhCc------cCceEEEeCHHHHHHHH
Confidence 999999999999999994 344444332111 12579999997 87742 24589988888776651
Q ss_pred CceeeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHhhcC
Q 001586 385 GRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKL 464 (1049)
Q Consensus 385 grivG~s~d~~g~~~~~l~lqtreq~irrekaTsni~t~~~l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~ 464 (1049)
.. ... +.+ . +.++.+...+..+++ .++. + .+++.++..++.+++++.|+++
T Consensus 266 ~~---------~~~-~~~-------------~--~~~~~~~~~a~~~al--~~~~-~-~~~~~~~~~~~~~~l~~~L~~~ 316 (397)
T PRK06939 266 QR---------SRP-YLF-------------S--NSLAPAIVAASIKVL--ELLE-E-SDELRDRLWENARYFREGMTAA 316 (397)
T ss_pred Hh---------Ccc-ccc-------------c--CCCCHHHHHHHHHHH--HHHh-c-CHHHHHHHHHHHHHHHHHHHHc
Confidence 10 000 000 0 111122223333333 3332 2 2567788889999999999988
Q ss_pred CCeEEcCCCCcceEEEecCC---HHHHHHHHHHcCCeeeee-------cCCeEEEEeccCCCHHHHHHHHHHHh
Q 001586 465 GTVEVQGLPFFDTVKVKCAD---AHAIASAAYKIEMNLRVV-------DSNTVTASFDETTTLEDVDKLFIVFA 528 (1049)
Q Consensus 465 g~~~v~~~~~~~~v~i~~~~---~~~v~~~L~~~gI~~~~~-------~~~~vris~~~~~t~edid~lv~aL~ 528 (1049)
| +++... ....+.+.++. ..++.+.|.++||.+... ..+.+|++++.++|++||+++++.|.
T Consensus 317 ~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~l~~L~ 388 (397)
T PRK06939 317 G-FTLGPG-EHPIIPVMLGDAKLAQEFADRLLEEGVYVIGFSFPVVPKGQARIRTQMSAAHTKEQLDRAIDAFE 388 (397)
T ss_pred C-CCcCCC-CCCEEEEEECCHHHHHHHHHHHHHCCceEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHH
Confidence 6 765432 11123233332 578999999999977432 12579999999999999999999996
No 186
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.69 E-value=5.8e-15 Score=171.25 Aligned_cols=214 Identities=23% Similarity=0.208 Sum_probs=157.7
Q ss_pred HHHHHHHHHHHHhCCCCcceEeccchHHHHHHHHHHhhhccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCcch-
Q 001586 212 SLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKD- 290 (1049)
Q Consensus 212 ~l~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a~~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~~~~- 290 (1049)
...++++.+|+++|.+. +.++.+|++++.++++++. ++||+||++...|..+...++..++..|+++++++.++
T Consensus 41 ~~~~le~~la~l~g~~~--a~~~~sG~~Ai~~~l~~l~---~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~ 115 (369)
T cd00614 41 TVDALEKKLAALEGGEA--ALAFSSGMAAISTVLLALL---KAGDHVVASDDLYGGTYRLFERLLPKLGIEVTFVDPDDP 115 (369)
T ss_pred hHHHHHHHHHHHHCCCC--EEEEcCHHHHHHHHHHHHc---CCCCEEEECCCCcchHHHHHHHHHhhcCeEEEEeCCCCH
Confidence 34567789999999864 6788999988887776652 27899999999999998888766778899999998754
Q ss_pred --hhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCC
Q 001586 291 --IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGY 365 (1049)
Q Consensus 291 --l~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~p~~~GaDivvgs~-k~lg~P~~~ 365 (1049)
+++ +++++++|++++| |++|.+.|+++|+++||++|++++|+ +.++.+....|.++|+|++++|. |.|++|
T Consensus 116 ~~l~~~i~~~~~~v~~e~~~np~g~~~dl~~i~~la~~~g~~livD-~t~~~~~~~~~~~~g~Divv~S~tK~l~g~--- 191 (369)
T cd00614 116 EALEAAIKPETKLVYVESPTNPTLKVVDIEAIAELAHEHGALLVVD-NTFATPYLQRPLELGADIVVHSATKYIGGH--- 191 (369)
T ss_pred HHHHHhcCCCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEE-CCCcchhcCChhhhCCcEEEeccceeccCC---
Confidence 445 7778999999988 78999999999999999999999994 56666666677789999999998 767532
Q ss_pred CCCceEEEEEch-hHHhcCCCceeeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcchHH
Q 001586 366 GGPHAAFLATSQ-EYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLK 444 (1049)
Q Consensus 366 GGP~~G~l~~~~-~l~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irrekaTsni~t~~~l~a~~aa~y~~~~g~~Gl~ 444 (1049)
|..-+|++++++ ++.+++.. .++.-++ .. ++. .+ ++...+-+.+.
T Consensus 192 ~~~~gG~v~~~~~~l~~~l~~-------------------------~~~~~g~-~~---~p~---~a--~~~l~~l~tl~ 237 (369)
T cd00614 192 SDVIAGVVVGSGEALIQRLRF-------------------------LRLALGT-IL---SPF---DA--WLLLRGLKTLP 237 (369)
T ss_pred CCceEEEEEeCcHHHHHHHHH-------------------------HHHhhCC-CC---CHH---HH--HHHHcCCCCHH
Confidence 223468888876 66544410 0011111 11 121 11 12344455677
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCeE
Q 001586 445 TIAQRVHGLAGTFALGLKKLGTVE 468 (1049)
Q Consensus 445 ~ia~~~~~~a~~l~~~L~~~g~~~ 468 (1049)
...++..+++.++++.|++.++++
T Consensus 238 ~r~~~~~~na~~la~~L~~~~~v~ 261 (369)
T cd00614 238 LRMERHSENALKVAEFLEKHPKVE 261 (369)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCcc
Confidence 778888999999999999886453
No 187
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.69 E-value=9.2e-16 Score=176.98 Aligned_cols=298 Identities=9% Similarity=0.006 Sum_probs=188.2
Q ss_pred HHHHHHHHHHHHHhhCCCc---cccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccH----HHHHhcCCE
Q 001586 631 QEMFNNLGEWLCTITGFDS---FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNP----ATAAMCGMK 703 (1049)
Q Consensus 631 ~~~i~el~~~la~l~G~~~---~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~p----a~a~~~G~~ 703 (1049)
.+++.++++.+++++|.+. +.+..++|+.|.++++..+- . +++++++..+ |.+. ..++..|..
T Consensus 47 ~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgt~~~Ea~~~nl~----~----~g~~~l~i~~--G~fg~r~~~~a~~~g~~ 116 (360)
T PRK05355 47 EAVAEEAEADLRELLNIPDNYKVLFLQGGASLQFAMVPMNLL----G----GGKKADYVDT--GSWSKKAIKEAKKYGEV 116 (360)
T ss_pred HHHHHHHHHHHHHHhCCCCCcEEEEEcCCchHHHHHHHHhcC----C----CCCeEEEEEC--CHHHHHHHHHHHHhCCc
Confidence 4678899999999999732 34667888888877765432 1 2345553322 3322 236677865
Q ss_pred EEEEcCCC-CCCCCHHHHHH-HHHhcCCCeEEEEEEcCC-ccccccccHHHHHHHHHHcCCEEEEeccccccccCcCCCC
Q 001586 704 IVSVGTDA-KGNINIEELRK-AAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPG 780 (1049)
Q Consensus 704 Vv~V~~d~-~g~iD~~~L~~-~i~~~~~~taaV~it~Pn-~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~Pg 780 (1049)
+.+..++ .|..+..++++ +++ +++++|.+++-. .+|+..++|++| +|++++||+++..+...+ ...
T Consensus 117 -~~~~~~~~~g~~~~~~~~~~~l~---~~~~~V~~th~eTstGv~~~~i~~i------~g~l~vVDavss~g~~~i-dv~ 185 (360)
T PRK05355 117 -NVAASSEDDGFTYIPPLDEWQLS---DDAAYVHYTSNETIDGTEFHELPDT------GDVPLVADMSSDILSRPI-DVS 185 (360)
T ss_pred -eEEecccccCCCCCCChhhccCC---CCCCEEEEccCCCcceEecCccccc------CCCcEEEEcCccccCccC-CHH
Confidence 6666654 67777766666 675 577888888764 599997457766 899999999865333222 122
Q ss_pred ccCCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHH
Q 001586 781 YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYI 860 (1049)
Q Consensus 781 ~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l 860 (1049)
+ .|++++++||+|+ .||+|++++++++.+.+.... +...+.........+.++.+ ...+.+..+.|
T Consensus 186 ~--~d~~~~ssqK~lg------P~Glg~l~~s~~~l~~~~~~~-~~~~~~~~~~~~~~~~~Tp~-----~~~i~aL~~aL 251 (360)
T PRK05355 186 K--FGLIYAGAQKNIG------PAGLTIVIVREDLLGRALPSI-PSMLDYKTHADNDSMYNTPP-----TFAIYLAGLVF 251 (360)
T ss_pred H--ccEEEEecccccc------CCceEEEEECHHHHhhcccCC-ChHHHHHHHHhcCCccCCCc-----HHHHHHHHHHH
Confidence 3 4699999999873 368999999998776654321 11011000000111122211 11222334556
Q ss_pred HHHchh-hHHHHHHHHHHHHHHHHHHHhcc--CCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHHHCCcccCCC
Q 001586 861 AMMGSK-GLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTM 937 (1049)
Q Consensus 861 ~~lG~e-Gl~~~~~~~~~~a~yL~~~L~~~--~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~ 937 (1049)
..+-.+ |+..+.++...++++++++|+++ +..+ ..+..+....+.|.++. +....++.+.+.++|++....
T Consensus 252 ~~i~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~-~~~~~rs~~v~sf~~~~-----~~~~~~~~~~~~~~Gi~~~~~ 325 (360)
T PRK05355 252 KWLKEQGGVAAMEKRNQEKAALLYDAIDSSDFYRNP-VAPEDRSRMNVPFTLAD-----EELDKKFLAEAKAAGLVGLKG 325 (360)
T ss_pred HHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccC-CChhhcCCcEEEEEcCC-----hHHHHHHHHHHHHCCCcccCC
Confidence 666677 79999999999999999999985 2221 11111111123444431 223356667788899997432
Q ss_pred CCCCCCEEEEEccCCCCHHHHHHHHHHHHHHHH
Q 001586 938 SWPVPGTLMIEPTESESKEELDRYCDALISIRE 970 (1049)
Q Consensus 938 ~~p~~~~lri~~t~~~t~eeid~fv~aL~~i~~ 970 (1049)
.. ..+.+|+|+..++|++|||+|+++|+++++
T Consensus 326 ~~-~~g~vRiS~~~~nt~eei~~l~~~l~~~~~ 357 (360)
T PRK05355 326 HR-SVGGMRASIYNAMPLEGVQALVDFMKEFER 357 (360)
T ss_pred CC-ccCcEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 21 248899999999999999999999999754
No 188
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.69 E-value=5.4e-15 Score=172.21 Aligned_cols=296 Identities=15% Similarity=0.216 Sum_probs=184.7
Q ss_pred HHHHHHHHHhhCCCccccc-cCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCEEEEEcCCC--
Q 001586 635 NNLGEWLCTITGFDSFSLQ-PNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA-- 711 (1049)
Q Consensus 635 ~el~~~la~l~G~~~~~l~-~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~Vv~V~~d~-- 711 (1049)
.++++++++++|.+...+. .+++++|.. ++++.+. .++++|++++..+......++..|.+++.++++.
T Consensus 69 ~~lr~~ia~~l~~~~~~v~~~~g~t~al~---~~~~~~~-----~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~ 140 (380)
T PRK06225 69 PELRELILKDLGLDDDEALITAGATESLY---LVMRAFL-----SPGDNAVTPDPGYLIIDNFASRFGAEVIEVPIYSEE 140 (380)
T ss_pred HHHHHHHHHhcCCCCCcEEEeCCHHHHHH---HHHHHhc-----CCCCEEEEcCCCCcchHHHHHHhCceEEeecccccc
Confidence 4678899999998765443 444554443 3333321 2467899988777666666788999999999742
Q ss_pred -CCCCCHHHHHHHHHhcCCCeEEEEEEcCC-cccccc--ccHHHHHHHHHHcCCEEEEeccccccccCcCCCC--ccCCc
Q 001586 712 -KGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPG--YIGAD 785 (1049)
Q Consensus 712 -~g~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~--~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~Pg--~~GaD 785 (1049)
++.+|+++++++++ +++++|++++|+ .+|.+- +++++|+++|+++|+++++|+++..-..+..... +....
T Consensus 141 ~~~~~d~~~l~~~~~---~~~~~v~l~~p~NptG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~ 217 (380)
T PRK06225 141 CNYKLTPELVKENMD---ENTRLIYLIDPLNPLGSSYTEEEIKEFAEIARDNDAFLLHDCTYRDFAREHTLAAEYAPEHT 217 (380)
T ss_pred CCccCCHHHHHhhcC---CCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCcEEEEehhHHHHhccCCchhhcCCCCE
Confidence 25799999999987 788999999995 589763 2699999999999999999987421000111111 11234
Q ss_pred EEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHch
Q 001586 786 VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGS 865 (1049)
Q Consensus 786 i~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~ 865 (1049)
+++.+++|+|+. .|.++|++++++++.+.+.... ....+. +.....++.+.+... .
T Consensus 218 i~~~s~SK~~g~----~G~RiG~i~~~~~l~~~~~~~~---------------~~~~~~----~~~~~~~a~~~l~~~-~ 273 (380)
T PRK06225 218 VTSYSFSKIFGM----AGLRIGAVVATPDLIEVVKSIV---------------INDLGT----NVIAQEAAIAGLKVK-D 273 (380)
T ss_pred EEEeechhhcCC----ccceeEEEecCHHHHHHHHHHH---------------hcccCC----CHHHHHHHHHHHhcc-h
Confidence 667788898843 3567899999877665432100 001111 111112222333221 1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhcc--CCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHHHCCcccCCCC-C-C-
Q 001586 866 KGLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMS-W-P- 940 (1049)
Q Consensus 866 eGl~~~~~~~~~~a~yL~~~L~~~--~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~-~-p- 940 (1049)
+-+++..+...++.+++.+.|+++ ..+......+ . -+.++++. .+.+..+++++|.++||.+.... + +
T Consensus 274 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g-~--~~~~~~~~----~~~~~~~l~~~l~~~gi~v~~g~~~~~~ 346 (380)
T PRK06225 274 EWIDRIRRTTFKNQKLIKEAVDEIEGVFLPVYPSHG-N--MMVIDISE----AGIDPEDLVEYLLERKIFVRQGTYTSKR 346 (380)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCcCCccccCCCCC-e--EEEEEccc----ccCCHHHHHHHHHHCCEEEcCCcccCcC
Confidence 112233333445566777888763 2221111112 2 24556542 23577899999999999865332 1 1
Q ss_pred -CCCEEEEEccCCCCHHHHHHHHHHHHHHHHHHHH
Q 001586 941 -VPGTLMIEPTESESKEELDRYCDALISIREEIAQ 974 (1049)
Q Consensus 941 -~~~~lri~~t~~~t~eeid~fv~aL~~i~~~i~~ 974 (1049)
-.+++|+++. .+++|+++++++|++++++++.
T Consensus 347 ~~~~~iR~s~~--~~~e~l~~~~~~l~~~~~~~~~ 379 (380)
T PRK06225 347 FGDRYIRVSFS--IPREQVEVFCEEFPDVVETLRT 379 (380)
T ss_pred CCCceEEEEeC--CCHHHHHHHHHHHHHHHHHhhc
Confidence 1368999986 4689999999999999988764
No 189
>PRK05968 hypothetical protein; Provisional
Probab=99.69 E-value=2.5e-15 Score=175.27 Aligned_cols=274 Identities=18% Similarity=0.145 Sum_probs=191.3
Q ss_pred HHHHHHHHHHHhCCCCcceEeccchHHHHHHHHHHhhhccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCcch--
Q 001586 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKD-- 290 (1049)
Q Consensus 213 l~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a~~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~~~~-- 290 (1049)
..++++.+|+++|.+. +.++.+|++++.++++++ . ++||+||++...|+.+...+...++..|++++++|..+
T Consensus 65 ~~~le~~lA~l~g~~~--av~~~sG~~Ai~~al~al-~--~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~ 139 (389)
T PRK05968 65 VRAFEEMLAKLEGAED--ARGFASGMAAISSTVLSF-V--EPGDRIVAVRHVYPDAFRLFETILKRMGVEVDYVDGRDEE 139 (389)
T ss_pred HHHHHHHHHHHhCCCc--EEEECCHHHHHHHHHHHH-h--CCCCEEEEeCCCchHHHHHHHHHHHHcCceEEEeCCCCHH
Confidence 4567789999999875 456788887777665554 2 38999999999999998888766777899999987644
Q ss_pred -hhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCCC
Q 001586 291 -IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYG 366 (1049)
Q Consensus 291 -l~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~p~~~GaDivvgs~-k~lg~P~~~G 366 (1049)
+++ + ++|++|++++| |..+.+.|+++|+++||++|++++|+ +.++.+....|.++|+|+++.|. |.|++| |
T Consensus 140 ~l~~~i-~~tklV~ie~pt~~~~~~~dl~~i~~la~~~gi~vivD-~a~a~~~~~~p~~~g~Divv~S~tK~l~g~---~ 214 (389)
T PRK05968 140 AVAKAL-PGAKLLYLESPTSWVFELQDVAALAALAKRHGVVTMID-NSWASPVFQRPITLGVDLVIHSASKYLGGH---S 214 (389)
T ss_pred HHHHhc-ccCCEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEE-CCCcchhccCchhcCCcEEEeeccccccCC---C
Confidence 444 5 57899999998 78899999999999999999999995 34455555557789999999998 777644 3
Q ss_pred CCceEEEEEchhHHhcCCCceeeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcchHHHH
Q 001586 367 GPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTI 446 (1049)
Q Consensus 367 GP~~G~l~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irrekaTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i 446 (1049)
++.+|+++.++++.+++.... +..-+ ..+ .+ ..|++ ...+-+.+...
T Consensus 215 ~~~gG~i~~~~~~~~~l~~~~------------------------~~~~g-~~~---~~---~~A~~--~l~~L~tl~~r 261 (389)
T PRK05968 215 DTVAGVVAGSKEHIARINAEA------------------------YPYLG-AKL---SP---FEAWL--LLRGLRTLPLR 261 (389)
T ss_pred CeEEEEEEECHHHHHHHHHHH------------------------HHhCC-CCC---Ch---HHHHH--HHcccCcHHHH
Confidence 445688888887665441000 00000 000 11 12222 23444566667
Q ss_pred HHHHHHHHHHHHHHhhcCCCeEEcC-C--C---------CcceEEEecCC---HHHHHHHHHHcCCeee-----e-----
Q 001586 447 AQRVHGLAGTFALGLKKLGTVEVQG-L--P---------FFDTVKVKCAD---AHAIASAAYKIEMNLR-----V----- 501 (1049)
Q Consensus 447 a~~~~~~a~~l~~~L~~~g~~~v~~-~--~---------~~~~v~i~~~~---~~~v~~~L~~~gI~~~-----~----- 501 (1049)
.++..+++.++++.|+++.+++.+. + + +...|+|.+++ +.++.++|...++-++ .
T Consensus 262 ~~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~g~g~~~sf~~~~~~~~~~f~~~L~~~~~~~s~G~~~slv~p~ 341 (389)
T PRK05968 262 MKAHEASALEIARRLKAHPVVERVCHPALANHPPAGLSGTSGLFSFIFREGIDVRAFADALKLFRLGVSWGGHESLVVPA 341 (389)
T ss_pred HHHHHHHHHHHHHHHHhCCCccEEECCCCCCChHHhCCCCceEEEEEECCHHHHHHHHHhCCccEEecCCCCCCceeeeC
Confidence 7777888999999999885465432 1 0 11257777753 5677777765554210 0
Q ss_pred -----------------ecCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001586 502 -----------------VDSNTVTASFDETTTLEDVDKLFIVFAG 529 (1049)
Q Consensus 502 -----------------~~~~~vris~~~~~t~edid~lv~aL~~ 529 (1049)
+.++.||+|++..++++=|+.|-++|..
T Consensus 342 ~~~~~~~~~~~~~~~~gi~~~liR~SvGlE~~~dl~~dl~~al~~ 386 (389)
T PRK05968 342 EVVLQQKAQPNSAARFGVSPRSVRLHVGLEGTEALWADLEQALAA 386 (389)
T ss_pred cccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHH
Confidence 1146899999999988888888888863
No 190
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.69 E-value=3.9e-15 Score=171.09 Aligned_cols=279 Identities=16% Similarity=0.160 Sum_probs=183.8
Q ss_pred HHHHHHHHHHHHhCCCCcceEeccchHHHHHHHHHHhhhccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCcc--
Q 001586 212 SLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK-- 289 (1049)
Q Consensus 212 ~l~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a~~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~~~-- 289 (1049)
...++++.+++++|.+ ++.++.+||.+.+.++.++... ++++|+++...|+++...++. .|++++.++.+
T Consensus 19 ~~~~~~~~la~~~~~~--~~~~~~sgt~al~~~l~~l~~~--~gd~vl~~~~~~~~~~~~~~~----~g~~~~~~~~~~~ 90 (352)
T cd00616 19 KVREFEKAFAEYLGVK--YAVAVSSGTAALHLALRALGIG--PGDEVIVPSFTFVATANAILL----LGATPVFVDIDPD 90 (352)
T ss_pred HHHHHHHHHHHHhCCC--eEEEECCHHHHHHHHHHHcCCC--CCCEEEeCCcchHHHHHHHHH----cCCeEEEEecCCC
Confidence 3557888999999975 4778889998887777665433 789999999999999888753 58888876542
Q ss_pred -------hhhc-cCCCEeEEEEEcCCCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCC---CCcccceEEEecC--
Q 001586 290 -------DIDY-KSGDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKP---PGELGADIVVGSA-- 356 (1049)
Q Consensus 290 -------~l~~-l~~~t~~V~v~~pn~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~---p~~~GaDivvgs~-- 356 (1049)
++++ +++++++|++++ ++|.+.|+++|.++|+++|+++++++ ..++|.... .+.+ .|+.+.|.
T Consensus 91 ~~~~d~~~l~~~i~~~~~~v~~~~--~~G~~~~~~~i~~l~~~~~i~li~D~-a~~~g~~~~~~~~~~~-~d~~~~S~~~ 166 (352)
T cd00616 91 TYNIDPELIEAAITPRTKAIIPVH--LYGNPADMDAIMAIAKRHGLPVIEDA-AQALGATYKGRKVGTF-GDAGAFSFHP 166 (352)
T ss_pred cCCcCHHHHHHhcCcCCeEEEEEC--CCCCcCCHHHHHHHHHHcCCeEEEEC-CCCCCCeECCEEcccC-cceeEEcCCC
Confidence 3444 677899999876 58999999999999999999999943 334443211 1233 58888773
Q ss_pred -ccccccCCCCCCceEEEEEc-hhHHhcCCCce-eeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHH
Q 001586 357 -QRFGVPMGYGGPHAAFLATS-QEYKRMMPGRI-VGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAM 433 (1049)
Q Consensus 357 -k~lg~P~~~GGP~~G~l~~~-~~l~~~lpgri-vG~s~d~~g~~~~~l~lqtreq~irrekaTsni~t~~~l~a~~aa~ 433 (1049)
|+|+ +|.+|++.++ +++.+++.... -|...+ . . +.+..+.+. +..+..+.+++
T Consensus 167 ~K~~~------~~~gg~~~~~~~~~~~~~~~~~~~~~~~~----~-~-----------~~~~~~~~~--~~~~~~~~aa~ 222 (352)
T cd00616 167 TKNLT------TGEGGAVVTNDEELAERARLLRNHGRDRD----R-F-----------KYEHEILGY--NYRLSEIQAAI 222 (352)
T ss_pred CCCCc------ccCceEEEECCHHHHHHHHHHHHcCCCCC----C-C-----------ccccceeee--ccCcCHHHHHH
Confidence 5552 2234666665 46655442111 010000 0 0 111111111 01111222222
Q ss_pred HHHHhCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEcCCC-----CcceEEEecC---C--HHHHHHHHHHcCCeeeeec
Q 001586 434 YAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLP-----FFDTVKVKCA---D--AHAIASAAYKIEMNLRVVD 503 (1049)
Q Consensus 434 y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~g~~~v~~~~-----~~~~v~i~~~---~--~~~v~~~L~~~gI~~~~~~ 503 (1049)
.....++++++.++..++++++++.|+++.|++++..+ ....+.|.++ + ..++.+.|.++||.++...
T Consensus 223 --~~~~l~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~L~~~gI~~~~~~ 300 (352)
T cd00616 223 --GLAQLEKLDEIIARRREIAERYKELLADLPGIRLPDVPPGVKHSYHLYVIRLDPEAGESRDELIEALKEAGIETRVHY 300 (352)
T ss_pred --HHHHHHhhHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCceeeEEEEEEECCcCCCCHHHHHHHHHHCCCCeeeec
Confidence 22233567888889999999999999997448877432 1123555544 3 7899999999999653210
Q ss_pred ---------------------------CCeEEEEeccCCCHHHHHHHHHHHh
Q 001586 504 ---------------------------SNTVTASFDETTTLEDVDKLFIVFA 528 (1049)
Q Consensus 504 ---------------------------~~~vris~~~~~t~edid~lv~aL~ 528 (1049)
.+.+|++++.++|++|||+++++|+
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~l~~~~~~t~~di~~i~~~l~ 352 (352)
T cd00616 301 PPLHHQPPYKKLLGYPPGDLPNAEDLAERVLSLPLHPSLTEEEIDRVIEALR 352 (352)
T ss_pred CccccCHhhhhccCCCcCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHhC
Confidence 1579999999999999999999874
No 191
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=99.69 E-value=1.5e-14 Score=171.33 Aligned_cols=306 Identities=17% Similarity=0.212 Sum_probs=194.5
Q ss_pred HHHHHHHHHHhhC--CCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEE-EcCCCCCccHHHHHhcC---------
Q 001586 634 FNNLGEWLCTITG--FDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCG--------- 701 (1049)
Q Consensus 634 i~el~~~la~l~G--~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VL-ip~saHg~~pa~a~~~G--------- 701 (1049)
..++.++|++++. .+. .++.+||+++++++++.+|.|...+|.++|.+|| ...++||....+....|
T Consensus 94 ~~~la~~L~~~~p~~~~~-v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~ 172 (445)
T PRK09221 94 AFELAERLAELAPGGLDH-VFFTNSGSESVDTALKIALAYHRARGQGTRTRLIGRERGYHGVGFGGISVGGIVNNRKMFG 172 (445)
T ss_pred HHHHHHHHHHhCCCCCCE-EEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCccchhhhccCCChhhhhccC
Confidence 3478888999874 333 4678999999999999999987655544466676 67889997554322211
Q ss_pred ---CEEEEEcCCC---C---C-------CCCHHHHHHHHHhcC-CCeEEEEEEcC-Cccccccc---cHHHHHHHHHHcC
Q 001586 702 ---MKIVSVGTDA---K---G-------NINIEELRKAAEANR-DNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNG 760 (1049)
Q Consensus 702 ---~~Vv~V~~d~---~---g-------~iD~~~L~~~i~~~~-~~taaV~it~P-n~~G~i~~---di~eI~~lah~~G 760 (1049)
..+..+|... . + ..+++++++.+++++ +++++|+++.. +..|++.+ .+++|+++|+++|
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g 252 (445)
T PRK09221 173 GLLPGVDHLPHTLDLPENAFSKGQPEHGAELADDLERLVALHDASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHG 252 (445)
T ss_pred CCCCCCeEeCCCccccccccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHcC
Confidence 1233444321 0 0 012468888887653 68999988765 44687762 2999999999999
Q ss_pred CEEEEeccccccccCcCCCCcc--------CCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCC
Q 001586 761 GQVYMDGANMNAQVGLTSPGYI--------GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPA 832 (1049)
Q Consensus 761 ~ll~vD~A~~~a~~gl~~Pg~~--------GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~ 832 (1049)
+++++|+++ .|+.+.|.+ -+|++++ .|.++ +|...+|.+++++++...+.......
T Consensus 253 ~llI~DEV~----tG~GRtG~~~~~~~~gv~PDi~~~--gK~l~----gG~~Pi~av~~~~~i~~~~~~~~~~~------ 316 (445)
T PRK09221 253 ILLIFDEVI----TGFGRLGAAFAAERFGVTPDIITF--AKGLT----NGAIPMGAVIASDEIYDAFMQGPEYA------ 316 (445)
T ss_pred CEEEEeehh----hCCCcCchhhHHHhcCCCCCEEEe--ccccc----cCcccceeeEEcHHHHHhhccCcccc------
Confidence 999999974 355555432 3588877 47663 44333666777877666542110000
Q ss_pred CCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc--CCee--eccCCCceeeEEEEe
Q 001586 833 PEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPIL--FRGVNGTVAHEFIVD 908 (1049)
Q Consensus 833 ~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~--~~v~--~~g~~g~~~~e~iv~ 908 (1049)
.....+ +++.|+++.++++.+.|..+..+++. ++..++.++|+++|+++ +..+ ..|. | .+..+-+.
T Consensus 317 --~~~~~~---~T~~~~pl~~aaa~a~L~~i~~~~l~---~~~~~~g~~l~~~l~~l~~~~~v~~vrg~-G-l~~~v~~~ 386 (445)
T PRK09221 317 --IEFFHG---YTYSAHPVACAAGLATLDIYREEDLF---ERAAELAPYFEDAVHSLKGLPHVIDIRNI-G-LVAGIELA 386 (445)
T ss_pred --cccccc---cCCCcCHHHHHHHHHHHHHHHhccHH---HHHHHHHHHHHHHHHhhccCCCEEEEecC-c-eEEEEEEe
Confidence 000001 12335667777788888888766654 45667788999988765 2221 1121 2 22222221
Q ss_pred ccCccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEccCCCCHHHHHHHHHHHHHHHHHH
Q 001586 909 LRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEI 972 (1049)
Q Consensus 909 ~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~eeid~fv~aL~~i~~~i 972 (1049)
.. ..........+.++|.++|+.+... .+.+|++|+...|++|||+++++|.+++.++
T Consensus 387 ~~--~~~~~~~~~~~~~~~~~~Gv~~~~~----~~~lr~~Ppl~~t~~eid~~~~~l~~~l~~~ 444 (445)
T PRK09221 387 PR--PGAPGARGYEAFMKCFEKGLLVRYT----GDTIALSPPLIIEKAQIDELVDALGDALRAV 444 (445)
T ss_pred cc--cccccchHHHHHHHHHHCCeEEeec----CCEEEEECCccCCHHHHHHHHHHHHHHHHhh
Confidence 11 0001123467889999999987532 4789999999999999999999999988653
No 192
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.69 E-value=5.2e-15 Score=171.52 Aligned_cols=160 Identities=16% Similarity=0.192 Sum_probs=129.2
Q ss_pred HHHHHHHHHHhCCCCcceEeccchHHHHHHHHHHhhhccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc---ch
Q 001586 214 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---KD 290 (1049)
Q Consensus 214 ~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a~~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~~---~~ 290 (1049)
.++++.+|++.|.+ ++.++.+|++++.++++++ .. +||+||+++..|+.+...+....+..|+++++++. ++
T Consensus 53 ~~lE~~lA~l~g~~--~~~~~~sG~~Ai~~al~al-l~--~GD~Vl~~~~~y~~t~~~~~~~~~~~gi~v~~~d~~~~e~ 127 (377)
T TIGR01324 53 FALQDAMCELEGGA--GCYLYPSGLAAVTNSILAF-VK--AGDHVLMVDSAYEPTRYFCDIVLKRMGVDITYYDPLIGED 127 (377)
T ss_pred HHHHHHHHHHhCCC--cEEEECcHHHHHHHHHHHh-cC--CCCEEEEcCCCcHHHHHHHHHHHHhcCcEEEEECCCCHHH
Confidence 34668999999976 4788999999888877765 33 89999999999988777665445668999998876 45
Q ss_pred hhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCCCC
Q 001586 291 IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGG 367 (1049)
Q Consensus 291 l~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~p~~~GaDivvgs~-k~lg~P~~~GG 367 (1049)
+++ ++++|++|++++| |++|.+.|+++|+++||++|++++|+ +.++.+.+..|.++|+||+++|+ |+++++ |+
T Consensus 128 l~~~i~~~tklV~lesp~Np~g~~~dl~~I~~la~~~g~~livD-~t~a~g~~~~pl~~gaDivv~S~tK~l~G~---~d 203 (377)
T TIGR01324 128 IATLIQPNTKVLFLEAPSSITFEIQDIPAIAKAARNPGIVIMID-NTWAAGLLFKPLEHGVDISIQAGTKYLVGH---SD 203 (377)
T ss_pred HHHhcCCCceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEE-CCCccccccCccccCceEEEecCceeccCC---CC
Confidence 666 7889999999998 78999999999999999999999994 46677877788999999999998 777654 22
Q ss_pred CceEEEEEchhHHhc
Q 001586 368 PHAAFLATSQEYKRM 382 (1049)
Q Consensus 368 P~~G~l~~~~~l~~~ 382 (1049)
-.+|+++++++..++
T Consensus 204 ~~gG~v~~~~~~~~~ 218 (377)
T TIGR01324 204 IMIGTVVANARTWDQ 218 (377)
T ss_pred ceEEEEEeCHHHHHH
Confidence 345788887765443
No 193
>PLN02822 serine palmitoyltransferase
Probab=99.68 E-value=4.9e-15 Score=177.08 Aligned_cols=315 Identities=11% Similarity=0.076 Sum_probs=196.2
Q ss_pred ccccccCCCCCCCCCcHHHHHHHHhCC-ccccccCCChhhHhhhHHHHHHHHHHHHHHHhCCCCcceEeccchHHHHHHH
Q 001586 166 VYKSFIGMGYYNTHVPPVILRNIMENP-AWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAM 244 (1049)
Q Consensus 166 ~~~~~lG~g~y~~~~p~~i~~~~~~~~-~~~t~ytpyq~e~sqg~le~l~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~ 244 (1049)
.+.+|.+..|.+..-|+.+.+++.+.- .|.+ ++-.|...-|+.+.+.++++.+|+++|.+. ..++.+|.+++.++
T Consensus 110 ~~id~~s~~~lgl~~~~~i~ea~~~al~~~G~--g~~g~r~~yg~~~~~~~Lee~La~~~~~~~--~i~~s~G~~a~~sa 185 (481)
T PLN02822 110 DVVNFASANYLGLIGNEKIKESCTSALEKYGV--GSCGPRGFYGTIDVHLDCETKIAKFLGTPD--SILYSYGLSTIFSV 185 (481)
T ss_pred eEEEeECCCcCCCCCCHHHHHHHHHHHHHhCC--CCcccCccccCHHHHHHHHHHHHHHhCCCC--EEEECCHHHHHHHH
Confidence 344554443444444555543443211 1112 122344445778889999999999999764 44555555556665
Q ss_pred HHHhhhccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCcc---hhhc----cC------CCE-eEEEEEcC-CCC
Q 001586 245 AMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK---DIDY----KS------GDV-CGVLVQYP-GTE 309 (1049)
Q Consensus 245 ~~a~~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~~~---~l~~----l~------~~t-~~V~v~~p-n~~ 309 (1049)
+.++. +++|.|++++..|.++...++. .+.++++++.+ +++. +. +++ ++|++..+ +++
T Consensus 186 i~a~~---~~gd~Ii~d~~~H~s~~~~~~l----s~~~~~~~~~nd~~~l~~~l~~~~~~~~~~~~~~~~Ivve~i~~~~ 258 (481)
T PLN02822 186 IPAFC---KKGDIIVADEGVHWGIQNGLYL----SRSTIVYFKHNDMESLRNTLEKLTAENKRKKKLRRYIVVEAIYQNS 258 (481)
T ss_pred HHHhC---CCCCEEEEeCCccHHHHHHHHH----cCCeEEEECCCCHHHHHHHHHHHhhhhcccCCCcEEEEEecCCCCC
Confidence 55542 3789999999999998777643 25566666543 3332 11 335 56777665 679
Q ss_pred eeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCC-----cc-----cceEEEecC-ccccccCCCCCCceEEEEEchh
Q 001586 310 GEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPG-----EL-----GADIVVGSA-QRFGVPMGYGGPHAAFLATSQE 378 (1049)
Q Consensus 310 G~i~di~~I~~~ah~~galliV~a~~~alg~l~~p~-----~~-----GaDivvgs~-k~lg~P~~~GGP~~G~l~~~~~ 378 (1049)
|.+.|+++|.++|+++|++++++ +.++++.+...+ .+ ..||+++|. |.|+.+ | ||++++++
T Consensus 259 G~i~~L~~i~~l~~k~~~~LIvD-Ea~s~gvlG~~G~G~~e~~~v~~~~~dii~~s~sKalg~~---G----G~i~g~~~ 330 (481)
T PLN02822 259 GQIAPLDEIVRLKEKYRFRVLLD-ESNSFGVLGKSGRGLSEHFGVPIEKIDIITAAMGHALATE---G----GFCTGSAR 330 (481)
T ss_pred CCccCHHHHHHHHHHcCCEEEEE-CCccccccCCCCCChHHHcCCCCCCCeEEEecchhhhhhC---C----eEEEcCHH
Confidence 99999999999999999999994 566776664332 12 458999986 988631 2 68888887
Q ss_pred HHhcCCCceeeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHH-HHHHhCcchHHHHHHHHHHHHHHH
Q 001586 379 YKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAM-YAVYHGPEGLKTIAQRVHGLAGTF 457 (1049)
Q Consensus 379 l~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irrekaTsni~t~~~l~a~~aa~-y~~~~g~~Gl~~ia~~~~~~a~~l 457 (1049)
+++.+.- ...+|.+ +++.+.+...|++ .+..+. ...++.++..++.+++
T Consensus 331 ii~~~~~----------~~~~~~f------------------sa~lPp~~~~Aa~~aL~~l~--~~~~~~~~l~~~~~~l 380 (481)
T PLN02822 331 VVDHQRL----------SSSGYVF------------------SASLPPYLASAAITAIDVLE--DNPSVLAKLKENIALL 380 (481)
T ss_pred HHHHHHh----------cCCceee------------------ccccCHHHHHHHHHHHHHHH--hCHHHHHHHHHHHHHH
Confidence 7665410 0011111 1111111222222 112221 1256778899999999
Q ss_pred HHHhhcCCCeEEcCCC--CcceEEEecC------C---HHHHHHHHH-HcCCeeeee---------cCCeEEEEeccCCC
Q 001586 458 ALGLKKLGTVEVQGLP--FFDTVKVKCA------D---AHAIASAAY-KIEMNLRVV---------DSNTVTASFDETTT 516 (1049)
Q Consensus 458 ~~~L~~~g~~~v~~~~--~~~~v~i~~~------~---~~~v~~~L~-~~gI~~~~~---------~~~~vris~~~~~t 516 (1049)
++.|+++.|+.+.... ++-.+.+... + ..+++++|. ++||.+... .+..+|++++..+|
T Consensus 381 ~~~L~~~~g~~~~~~~~spi~~l~l~~~~~~~~~~~~~~~~~~~~Ll~e~GV~v~~~~~~~~~~~~~~~~lRi~is~~~t 460 (481)
T PLN02822 381 HKGLSDIPGLSIGSNTLSPIVFLHLEKSTGSAKEDLSLLEHIADRMLKEDSVLVVVSKRSTLDKCRLPVGIRLFVSAGHT 460 (481)
T ss_pred HHHHHhcCCcccCCCCCCCEEEEEeCCCcccccchHHHHHHHHHHHHhcCCEEEEeeCCCCcCCCCCCCcEEEEECCCCC
Confidence 9999987237765322 2222333211 1 357899987 789987532 12469999999999
Q ss_pred HHHHHHHHHHHhC
Q 001586 517 LEDVDKLFIVFAG 529 (1049)
Q Consensus 517 ~edid~lv~aL~~ 529 (1049)
++||++++++|+.
T Consensus 461 ~edI~~~~~~l~~ 473 (481)
T PLN02822 461 ESDILKASESLKR 473 (481)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999999964
No 194
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.68 E-value=1.1e-14 Score=171.19 Aligned_cols=295 Identities=14% Similarity=0.201 Sum_probs=190.9
Q ss_pred HHHHHHHHHHhhC--CCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEE-EcCCCCCccHHHHHhcC---------
Q 001586 634 FNNLGEWLCTITG--FDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCG--------- 701 (1049)
Q Consensus 634 i~el~~~la~l~G--~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VL-ip~saHg~~pa~a~~~G--------- 701 (1049)
..++.+.|+++++ ++. .++.+||+++++++++.+|.|...+|.++|.+|| ...+.||..-.+....+
T Consensus 85 ~~~lae~L~~~~p~~~~~-v~f~~SGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~ 163 (422)
T PRK05630 85 AIKLTRKLLNLTDNGLDH-VFYSDSGSVSVEVAIKMALQYSKGQGHPERTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLW 163 (422)
T ss_pred HHHHHHHHHhhCCCCcCE-EEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhccCCCcccccccc
Confidence 3478888999875 333 4778999999999999999987656655567776 68889997655433222
Q ss_pred ----CEEEEEcCCCCCCCC-------HHHHHHHHHhcCCCeEEEEEEcC-C-ccccccc---cHHHHHHHHHHcCCEEEE
Q 001586 702 ----MKIVSVGTDAKGNIN-------IEELRKAAEANRDNLSTLMVTYP-S-THGVYEE---GIDEICKIIHDNGGQVYM 765 (1049)
Q Consensus 702 ----~~Vv~V~~d~~g~iD-------~~~L~~~i~~~~~~taaV~it~P-n-~~G~i~~---di~eI~~lah~~G~ll~v 765 (1049)
-.+..+|.......+ .+++++.++ +++++|+++.. . ..|++.+ .+++|.++|++||+++++
T Consensus 164 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~ 240 (422)
T PRK05630 164 KGTLPEQIFAPAPPVRGSSPQEISEYLRSLELLID---ETVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIA 240 (422)
T ss_pred cccCCCCeEcCCCcccCCChHHHHHHHHHHHHHHh---hceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEE
Confidence 123344432111112 244555555 68999988862 3 4566542 589999999999999999
Q ss_pred eccccccccCcCCCCcc--------CCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCC
Q 001586 766 DGANMNAQVGLTSPGYI--------GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQ 837 (1049)
Q Consensus 766 D~A~~~a~~gl~~Pg~~--------GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~ 837 (1049)
|+++ .|+.+.|.+ -+|++++ .|.++ +|-+.+|.+++++++.+.+..... . .
T Consensus 241 DEv~----tG~GrtG~~~a~~~~gv~PDi~t~--gK~l~----gG~~p~~av~~~~~i~~~~~~~~~-~----------~ 299 (422)
T PRK05630 241 DEIA----TGFGRTGELFATLAAGVTPDIMCV--GKALT----GGFMSFAATLCTDKVAQLISTPNG-G----------G 299 (422)
T ss_pred ecce----eCCCcCchhhHHHhcCCCCCeeee--echhh----cCccccceeeccHHHHHHHhccCC-C----------C
Confidence 9974 555566532 3688866 47663 333566777778777665431100 0 0
Q ss_pred CCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc--CCee--eccCCCceeeEEEEeccCcc
Q 001586 838 PLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPIL--FRGVNGTVAHEFIVDLRGLK 913 (1049)
Q Consensus 838 ~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~--~~v~--~~g~~g~~~~e~iv~~~~~~ 913 (1049)
.. ...+++.|+++.++++.+.|..+.++.+. ++..++.++|+++|+.+ +..+ ..|. | .+. -+.+..
T Consensus 300 ~~-~h~~T~~g~Pla~aaa~aaL~~l~~~~~~---~~~~~~g~~l~~~L~~l~~~~~v~~vRg~-G-l~~--~ie~~~-- 369 (422)
T PRK05630 300 AL-MHGPTFMANPLACAVAHASLEIIETGMWR---KQVKRIEAELIAGLSPLAHLPGVADVRVL-G-AIG--VVEMEQ-- 369 (422)
T ss_pred cc-ccCCCCcCCHHHHHHHHHHHHHHHhCcHH---HHHHHHHHHHHHHHHHhhcCCCeeeeecc-c-cEE--EEEECC--
Confidence 00 01112346777788888888888776553 35556778888888753 2211 1121 2 222 223221
Q ss_pred ccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEccCCCCHHHHHHHHHHHHHHHH
Q 001586 914 NTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIRE 970 (1049)
Q Consensus 914 ~~~g~~~~~v~k~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~eeid~fv~aL~~i~~ 970 (1049)
..+...+.+.+.++|+.+... ++.+++.|....|++|||.++++|.+++.
T Consensus 370 ---~~~~~~~~~~~~~~Gl~~~~~----g~~l~~~PpL~it~~~i~~~~~~l~~al~ 419 (422)
T PRK05630 370 ---PVDMEEATQAAVDHGVWLRPF----GRLVYVMPPYITTSEQIAQICAALAAAVK 419 (422)
T ss_pred ---cccHHHHHHHHHHCCeEEEec----CCEEEEECCccCCHHHHHHHHHHHHHHHh
Confidence 123568889999999987532 47899999999999999999999998864
No 195
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=99.68 E-value=9.9e-15 Score=172.69 Aligned_cols=304 Identities=18% Similarity=0.220 Sum_probs=191.2
Q ss_pred HHHHHHHHHHhhC--CCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEE-EcCCCCCccHHHHHhcC---------
Q 001586 634 FNNLGEWLCTITG--FDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCG--------- 701 (1049)
Q Consensus 634 i~el~~~la~l~G--~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VL-ip~saHg~~pa~a~~~G--------- 701 (1049)
..++.+.|++++. ++. .++.+||+++++++++.+|.|...+|.++|.+|| ...+.||....+....|
T Consensus 91 ~~~la~~l~~~~p~~~~~-v~f~~sGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~ 169 (442)
T PRK13360 91 AFELANRIAEIAPGGLNH-VFFTNSGSESVDTALKIALAYHRARGEGSRTRLIGRERGYHGVGFGGISVGGIVPNRKAFG 169 (442)
T ss_pred HHHHHHHHHHhCCCCCCE-EEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHhhhhccCChhhhhccC
Confidence 3478888999874 443 4678999999999999999886545543456676 67889997654322111
Q ss_pred ---CEEEEEcCCCC-C------------CCCHHHHHHHHHhc-CCCeEEEEEEcC-Cccccccc---cHHHHHHHHHHcC
Q 001586 702 ---MKIVSVGTDAK-G------------NINIEELRKAAEAN-RDNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNG 760 (1049)
Q Consensus 702 ---~~Vv~V~~d~~-g------------~iD~~~L~~~i~~~-~~~taaV~it~P-n~~G~i~~---di~eI~~lah~~G 760 (1049)
..+..+|...+ . .-++++|++++..+ .+++++|+++.. +..|++.+ .+++|.++|++||
T Consensus 170 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g 249 (442)
T PRK13360 170 ALLPGVDHLPHTLDLARNAFSKGQPEHGAELADELERLVTLHDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHG 249 (442)
T ss_pred CCCCCCEEeCCCchhhccccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcC
Confidence 12344554311 0 01256888888654 367888887754 34677752 2999999999999
Q ss_pred CEEEEeccccccccCcCCCCcc--------CCcEEEeCCCcccccCCCCCC-CceeEEEEcccccccCCCCccccCCCCC
Q 001586 761 GQVYMDGANMNAQVGLTSPGYI--------GADVCHLNLHKTFCIPHGGGG-PGMGPIGVKKHLAPFLPSHPVVSTGGIP 831 (1049)
Q Consensus 761 ~ll~vD~A~~~a~~gl~~Pg~~--------GaDi~~~s~hK~f~~P~g~GG-Pg~G~i~~~~~l~~~lpg~~vg~t~~~~ 831 (1049)
+++++|+++ .|+.+.|.+ .+|++++ .|.++ +|. | +|.+.++++++..+......
T Consensus 250 ~llI~DEv~----tG~GrtG~~~a~~~~gv~PDivt~--gK~l~----gG~~P-~gav~~~~~i~~~~~~~~~~------ 312 (442)
T PRK13360 250 ILLIFDEVI----TGFGRLGAPFAAQYFGVTPDLLTC--AKGLT----NGAIP-MGAVFVSSEIHDAFMQGPEA------ 312 (442)
T ss_pred CEEEEechh----hCCCCCccchhhhhcCCCCceeee--eeccc----cCccc-eEEEEEcHHHHHHhhcCCcc------
Confidence 999999974 344444432 3688866 47663 342 5 45566777766544211000
Q ss_pred CCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc--CCeee--ccCCCceeeEEEE
Q 001586 832 APEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPILF--RGVNGTVAHEFIV 907 (1049)
Q Consensus 832 ~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~--~~v~~--~g~~g~~~~e~iv 907 (1049)
..... ..+++.|+++.++++.+.|..+.++++. ++..++.+||.++|+++ +..+. .|. |. +..+-+
T Consensus 313 --~~~~~---~~~T~~g~pl~~aaa~a~L~~l~~~~l~---~~~~~~g~~l~~~l~~l~~~~~v~~vrG~-Gl-~~~~~l 382 (442)
T PRK13360 313 --GIEFF---HGYTYSGHPLACAAALATLDLYEREGLL---TRAARLAPYWEDALHSLRDAPHVIDIRNL-GL-VGAVEL 382 (442)
T ss_pred --ccccc---cCCCCCCCHHHHHHHHHHHHHHHhCCHH---HHHHHHHHHHHHHHHHhhcCCCeeeeecc-ce-EEEEEE
Confidence 00000 0112345677778888888888777654 44556778888888764 22211 121 21 111112
Q ss_pred eccCccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEccCCCCHHHHHHHHHHHHHHHHH
Q 001586 908 DLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREE 971 (1049)
Q Consensus 908 ~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~eeid~fv~aL~~i~~~ 971 (1049)
... .......+.++.++|.++|+.+... .+.+|++|+..+|++|||+++++|.+++++
T Consensus 383 ~~~--~~~~~~~~~~~~~~l~~~Gvl~~~~----~~~lr~~Ppl~~t~~eid~~~~~l~~~l~~ 440 (442)
T PRK13360 383 APR--DGKPGKRAYEVFLKCFEKGLMIRYT----GDILALSPPLIIEEAQIDELFDILAQALKE 440 (442)
T ss_pred ecC--CCCcchhHHHHHHHHHHCCcEEEec----CCEEEEeCCCccCHHHHHHHHHHHHHHHHH
Confidence 111 0000113467888899999987532 368999999999999999999999988765
No 196
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.68 E-value=1.5e-14 Score=170.03 Aligned_cols=289 Identities=17% Similarity=0.203 Sum_probs=189.6
Q ss_pred HHHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEE-EcCCCCCccHHHHHhcCC----------
Q 001586 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGM---------- 702 (1049)
Q Consensus 634 i~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VL-ip~saHg~~pa~a~~~G~---------- 702 (1049)
..++.+.|+++++.+. .++.+||+++++++++++|.|...++..+|++|+ ...+.||.........|-
T Consensus 83 ~~~la~~l~~~~~~~~-v~~~~sGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~ 161 (406)
T PRK12381 83 VLRLAKKLIDATFADR-VFFCNSGAEANEAALKLARKYAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFAPL 161 (406)
T ss_pred HHHHHHHHHhhCCCCe-EEEcCCcHHHHHHHHHHHHHHHhhcCCCCCCeEEEECCCcCCcchhHHhhcCCcccccCCCCC
Confidence 3478899999988764 4778999999999999999885444433456666 578899987655443332
Q ss_pred --EEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCCc-ccccc---ccHHHHHHHHHHcCCEEEEeccccccccCc
Q 001586 703 --KIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPST-HGVYE---EGIDEICKIIHDNGGQVYMDGANMNAQVGL 776 (1049)
Q Consensus 703 --~Vv~V~~d~~g~iD~~~L~~~i~~~~~~taaV~it~Pn~-~G~i~---~di~eI~~lah~~G~ll~vD~A~~~a~~gl 776 (1049)
.++.++. .|+++|++.++ +++++|+++..+. .|++. .++++|.++|++||+++++|+++ .|+
T Consensus 162 ~~~~~~~~~-----~d~~~l~~~l~---~~~aaviiEPv~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~----tG~ 229 (406)
T PRK12381 162 PPDIRHAAY-----NDLNSASALID---DQTCAVIVEPIQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQ----TGV 229 (406)
T ss_pred CCCeeEeCC-----CCHHHHHHhcc---CCeeEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchh----hCC
Confidence 1233333 48999999996 6899998863343 45542 36999999999999999999985 233
Q ss_pred CCCCc--------cCCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchh
Q 001586 777 TSPGY--------IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWG 848 (1049)
Q Consensus 777 ~~Pg~--------~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g 848 (1049)
.+.|. ..+|++++ .|.++ ||..+|++++++++.+.+.... + ... +.+
T Consensus 230 gr~G~~~~~~~~~v~pDi~t~--sK~l~-----gG~~ig~~~~~~~~~~~~~~~~---------~-----~~t----~~~ 284 (406)
T PRK12381 230 GRTGELYAYMHYGVTPDVLTT--AKALG-----GGFPIGAMLTTEKCASVMTVGT---------H-----GTT----YGG 284 (406)
T ss_pred CCCcchhhhHhhCCCCCEEEe--hhhhh-----CCCceEEEEEcHHHHhhcCCCC---------C-----CCC----CCC
Confidence 33321 23577655 57764 4566888888888776553110 0 011 123
Q ss_pred hHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc---CCeee--ccCCCceeeEEEEeccCccccCCCCHHHH
Q 001586 849 SALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPILF--RGVNGTVAHEFIVDLRGLKNTAGIEPEDV 923 (1049)
Q Consensus 849 ~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~---~~v~~--~g~~g~~~~e~iv~~~~~~~~~g~~~~~v 923 (1049)
+++.++++.+.+..+..+. ..++..++.+++.++|+++ +.+.. .+ .| .+ +.+.+.+ ........+
T Consensus 285 ~pl~~aaa~a~l~~l~~~~---~~~~~~~~~~~l~~~L~~l~~~~~~~~~vrg-~G-l~--~~~~l~~---~~~~~~~~~ 354 (406)
T PRK12381 285 NPLASAVAGKVLELINTPE---MLNGVKQRHDWFVERLNTINARYGLFSEIRG-LG-LL--IGCVLNA---EYAGKAKQI 354 (406)
T ss_pred CHHHHHHHHHHHHHHhhcc---HHHHHHHHHHHHHHHHHHHHhhCCCEEEEec-Ce-EE--EEEEecC---chhhHHHHH
Confidence 4455555666666664443 3455557788899988764 22211 11 12 11 2233321 000134678
Q ss_pred HHHHHHCCcccCCCCCCCCCEEEEEccCCCCHHHHHHHHHHHHHHHHHHH
Q 001586 924 AKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIA 973 (1049)
Q Consensus 924 ~k~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~eeid~fv~aL~~i~~~i~ 973 (1049)
.+.|.++|+.+.... ++.+|++|+..+|++|||++++.|.++++++.
T Consensus 355 ~~~l~~~Gv~v~~~g---~~~lRl~p~~~~t~~~i~~~~~~l~~~l~~~~ 401 (406)
T PRK12381 355 SQEAAKAGVMVLIAG---PNVVRFAPALNISEEEITTGLDRFARACERFV 401 (406)
T ss_pred HHHHHHCCcEEeeCC---CCEEEEeCCccCCHHHHHHHHHHHHHHHHHHH
Confidence 899999999974322 36899999999999999999999999887654
No 197
>PRK05965 hypothetical protein; Provisional
Probab=99.68 E-value=2.6e-14 Score=169.90 Aligned_cols=310 Identities=15% Similarity=0.167 Sum_probs=197.8
Q ss_pred HHHHHHHHHHhhCCCc-cccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEE-EcCCCCCccHHHHHh---------cCC
Q 001586 634 FNNLGEWLCTITGFDS-FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAM---------CGM 702 (1049)
Q Consensus 634 i~el~~~la~l~G~~~-~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VL-ip~saHg~~pa~a~~---------~G~ 702 (1049)
..++.+.|++++.-+. ..++.+||+++++++++.+|.|...+|.++|.+|| ...++||..-.+... +|.
T Consensus 92 ~~~lae~L~~~~p~~~~~v~f~~sGSEAve~AlKlAr~~~~~~g~~~r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~ 171 (459)
T PRK05965 92 AIRLAAKLAERAPGSLNHVYFTLGGSDAVDSAVRFIRHYWNATGRPSKKQFISLERGYHGSSSVGAGLTALPAFHRGFDL 171 (459)
T ss_pred HHHHHHHHHhhCCCCcCEEEEeCChhHHHHHHHHHHHHHHHhcCCCCccEEEEecCCcCcccHHHHHhcCCchhhcccCC
Confidence 3478888999874221 24678999999999999999987666655567777 678899986443222 121
Q ss_pred ---EEEEEcCCCC----CCCC--------HHHHHHHHHhcC-CCeEEEEEEcCC-ccccccc---cHHHHHHHHHHcCCE
Q 001586 703 ---KIVSVGTDAK----GNIN--------IEELRKAAEANR-DNLSTLMVTYPS-THGVYEE---GIDEICKIIHDNGGQ 762 (1049)
Q Consensus 703 ---~Vv~V~~d~~----g~iD--------~~~L~~~i~~~~-~~taaV~it~Pn-~~G~i~~---di~eI~~lah~~G~l 762 (1049)
.+..++.... ..-| ++++++.++.+. +++++|+++... ..|++.+ .+++|.++|++||++
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gil 251 (459)
T PRK05965 172 PLPWQHKIPSPYPYRNPVGDDPQAIIAASVAALRAKVAELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGIL 251 (459)
T ss_pred CCCCCEEcCCCcccccccCCChHHHHHHHHHHHHHHHHhcCCCceEEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCE
Confidence 1233433210 0123 367888887554 689999888653 4566642 589999999999999
Q ss_pred EEEeccccccccCcCCCCcc--------CCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCC
Q 001586 763 VYMDGANMNAQVGLTSPGYI--------GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPE 834 (1049)
Q Consensus 763 l~vD~A~~~a~~gl~~Pg~~--------GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~ 834 (1049)
+|+|++ +.|+.+.|.+ -+|++++ .|.++ +|--.+|.+++++++++.+....-
T Consensus 252 lI~DEV----~tGfGRtG~~~a~~~~gv~PDiv~~--gKgl~----gG~~Pi~av~~~~~i~~~~~~~~~---------- 311 (459)
T PRK05965 252 FVADEV----ITGFGRTGPLFACEAEGVVPDLMTV--AKGLT----SGYVPMGAVLMSDHVYQGIADGAG---------- 311 (459)
T ss_pred EEEech----hccCccCchhhhHhhcCCCCCeEEe--chhhc----cCCcceeEEEEcHHHHHHHhcccc----------
Confidence 999986 5677777643 3699988 48763 332236667778777654421100
Q ss_pred CCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc--CCee--eccCCCce-eeEEEEec
Q 001586 835 KSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPIL--FRGVNGTV-AHEFIVDL 909 (1049)
Q Consensus 835 ~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~--~~v~--~~g~~g~~-~~e~iv~~ 909 (1049)
.... ....+++.|+++.++++.+.|..+-++++.+ +...+.++|.++|+++ +.++ +.|. |.. ..+|+-+.
T Consensus 312 ~~~~-~~h~~T~~gnpl~~Aaa~a~L~~l~~~~l~~---~~~~~g~~l~~~l~~l~~~~~v~~vrG~-Gl~~gie~~~~~ 386 (459)
T PRK05965 312 AAAP-VGHGYTYSAHPVSAAVGLEVLRLYHEGGLLA---NGQKAGPRFAAGLDALRAHPLVGDVRGR-GLLGALELVADK 386 (459)
T ss_pred cccc-ccccCCCCCCHHHHHHHHHHHHHHHhccHHH---HHHHHHHHHHHHHHhhccCCCEEEEeec-ceEEEEEEeccc
Confidence 0000 0011234567788888899999987776554 4446778888888764 2221 1221 221 12222111
Q ss_pred cCccccCC---CCHHHHHHHHHHCCcccCCCCCCCCCEEEEEccCCCCHHHHHHHHHHHHHHHHHH
Q 001586 910 RGLKNTAG---IEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEI 972 (1049)
Q Consensus 910 ~~~~~~~g---~~~~~v~k~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~eeid~fv~aL~~i~~~i 972 (1049)
.. +.... .-...+.+.+.++|+.+.... .+.+++.|....|++|||+++++|.++++++
T Consensus 387 ~~-~~~~~~~~~~~~~i~~~~~~~Gll~~~~g---~~~i~~~PpL~it~~ei~~~~~~l~~~l~~~ 448 (459)
T PRK05965 387 AT-KTPFDAALDPADRIFDRAYANGLVFRAFG---DGVLGFAPALCCTEGEFDLIFERTRKTLDDV 448 (459)
T ss_pred cc-cCCCCchhHHHHHHHHHHHhCCeEEEecC---CcEEEEECCCcCCHHHHHHHHHHHHHHHHHH
Confidence 00 00000 013467778889999875332 3679999999999999999999999998875
No 198
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.68 E-value=8.1e-15 Score=170.35 Aligned_cols=272 Identities=18% Similarity=0.182 Sum_probs=185.3
Q ss_pred HHHHHHHHHHHhCCCCcceEeccchHHHHHHHHHHhhhccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCcc---
Q 001586 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK--- 289 (1049)
Q Consensus 213 l~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a~~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~~~--- 289 (1049)
..++++.+++++|.+ .+.++.+|++++.+++ .+ . ++||+||+++..|+++...|+..++..|++++++|..
T Consensus 49 ~~~le~~la~l~g~~--~~l~~~sG~~al~~~l-~l-l--~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~d~~ 122 (378)
T TIGR01329 49 RTALESLLAKLDKAD--RAFAFSSGMAALDVIT-RL-L--NNGDEIIAGDDLYGGTDRLLTQVVPRSGVVVVHVDTTDLD 122 (378)
T ss_pred HHHHHHHHHHHhCCC--cEEEECCHHHHHHHHH-HH-h--CCCCEEEEcCCCchHHHHHHHHHHHHcCcEEEEeCCCCHH
Confidence 456778999999985 4667788887666533 22 2 3899999999999999988887777889999999864
Q ss_pred hhhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCCC
Q 001586 290 DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYG 366 (1049)
Q Consensus 290 ~l~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~p~~~GaDivvgs~-k~lg~P~~~G 366 (1049)
++++ ++++|++|++++| |++|.+.|+++|+++||++|++++|+. .++.+....|.++|+|++++|+ |.+++|.
T Consensus 123 ~le~~i~~~tklv~le~psnptg~v~dl~~I~~la~~~g~~vivD~-a~~~~~~~~~l~~g~Di~v~S~tK~l~G~~--- 198 (378)
T TIGR01329 123 KVKAALGPKTKLVLLESPTNPLQKIVDIRKISEMAHAQNALVVVDN-TMMSPLLCNPLELGADIVYHSATKFLAGHS--- 198 (378)
T ss_pred HHHHhcCcCceEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEEC-CCcccccCChhhcCCcEEEEecceeccCCc---
Confidence 4555 7889999999998 789999999999999999999999953 4455555667789999999998 6665432
Q ss_pred CCceEEEEEchh-HHhcCCCceeeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcchHHH
Q 001586 367 GPHAAFLATSQE-YKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKT 445 (1049)
Q Consensus 367 GP~~G~l~~~~~-l~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irrekaTsni~t~~~l~a~~aa~y~~~~g~~Gl~~ 445 (1049)
+.-+|+++++++ +.+++. .+|+..|+ +. .+. .+ ++...+.+-+..
T Consensus 199 ~~~~G~v~~~~~~~~~~~~-------------------------~~~~~~G~---~~-~~~---~a--~l~~~~l~tl~~ 244 (378)
T TIGR01329 199 DVMAGVLAVKGEEIAKKVY-------------------------FLQNSTGS---GL-APF---DC--WLLLRGIKTLAI 244 (378)
T ss_pred cceeEEEEeCcHHHHHHHH-------------------------HHHHhcCC---cC-CHH---HH--HHHHccCCCHHH
Confidence 122688888653 323321 01111110 00 111 11 234556667777
Q ss_pred HHHHHHHHHHHHHHHhhcCCCe-EEc-CC----C-----------CcceEEEecCC---HHHHHHHHHHcCCeeee----
Q 001586 446 IAQRVHGLAGTFALGLKKLGTV-EVQ-GL----P-----------FFDTVKVKCAD---AHAIASAAYKIEMNLRV---- 501 (1049)
Q Consensus 446 ia~~~~~~a~~l~~~L~~~g~~-~v~-~~----~-----------~~~~v~i~~~~---~~~v~~~L~~~gI~~~~---- 501 (1049)
..++..+++..+++.|++...+ ++. .. + +...|+|.+.+ +.++.+.|...+|.++.
T Consensus 245 R~e~~~~na~~la~~L~~~~~v~~v~~p~l~~~p~~~l~~~~~~g~~~~~sf~~~~~~~~~~~~~~L~~~~i~~s~G~~~ 324 (378)
T TIGR01329 245 RIEKQQENARAIAMFLSTHPRVKKVRYAGLPSHPGFHLHFSQAKGAGSVLSFETGSVALSKRLVEATKLFSITVSFGSVN 324 (378)
T ss_pred HHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCcceEEEEEECCHHHHHHHHHhCcCcccccCCCCCC
Confidence 8888889999999999876433 222 11 1 11357777754 55788888655553210
Q ss_pred -----------------------ecCCeEEEEeccCCCHHHHHHHHHHHh
Q 001586 502 -----------------------VDSNTVTASFDETTTLEDVDKLFIVFA 528 (1049)
Q Consensus 502 -----------------------~~~~~vris~~~~~t~edid~lv~aL~ 528 (1049)
+.++.||+|++.-+.++=|+.|-++|.
T Consensus 325 sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~al~ 374 (378)
T TIGR01329 325 SLISMPCFMSHASIPAEVREERGLPEDLVRLSVGIEDVDDLISDLDIAFV 374 (378)
T ss_pred ceeeCCCccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHH
Confidence 124678999887654444555555554
No 199
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=99.68 E-value=2.3e-14 Score=171.67 Aligned_cols=309 Identities=14% Similarity=0.159 Sum_probs=192.5
Q ss_pred HHHHHHHHHHHhhC-CCc-cccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEE-EcCCCCCccHHHHHhcCCE------
Q 001586 633 MFNNLGEWLCTITG-FDS-FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGMK------ 703 (1049)
Q Consensus 633 ~i~el~~~la~l~G-~~~-~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VL-ip~saHg~~pa~a~~~G~~------ 703 (1049)
...++.+.|++++. .+. ..++.+||+++++++++++|.|...+|.++|++|| ...+.||.......+.|.+
T Consensus 134 ~~~~lae~L~~~~~~~~~~~v~f~~SGsEA~e~AlKlAr~~~~~~g~~~r~~iI~~~~~yHG~t~~a~slsg~~~~~~~~ 213 (504)
T PLN02760 134 PSLDLAKELLEMFTARKMGKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARSKSYHGSTLISASLSGLPALHQKF 213 (504)
T ss_pred HHHHHHHHHHhhcCCCCCCEEEEeCChHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCccCChHhhhhccCChhhccCC
Confidence 34578888888853 222 24678999999999999999887655644456666 6778999865444333321
Q ss_pred ------EEEEcCCCC------C-------CCCHHHHHHHHHh-cCCCeEEEEEEcC-Ccccccccc---HHHHHHHHHHc
Q 001586 704 ------IVSVGTDAK------G-------NINIEELRKAAEA-NRDNLSTLMVTYP-STHGVYEEG---IDEICKIIHDN 759 (1049)
Q Consensus 704 ------Vv~V~~d~~------g-------~iD~~~L~~~i~~-~~~~taaV~it~P-n~~G~i~~d---i~eI~~lah~~ 759 (1049)
+..++++.. + ....++|++++.+ +.+++++|+++.. +..|++.++ +++|+++|++|
T Consensus 214 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~ 293 (504)
T PLN02760 214 DLPAPFVLHTDCPHYWRFHLPGETEEEFSTRLADNLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKY 293 (504)
T ss_pred CCCCCCcEEeCCCcccccCCCCCcHHHHHHHHHHHHHHHHHhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHc
Confidence 233333210 0 1123568887753 3457888877654 346777632 99999999999
Q ss_pred CCEEEEeccccccccCcCCCCcc--------CCcEEEeCCCcccccCCCCCC-CceeEEEEcccccccCCCCccccCCCC
Q 001586 760 GGQVYMDGANMNAQVGLTSPGYI--------GADVCHLNLHKTFCIPHGGGG-PGMGPIGVKKHLAPFLPSHPVVSTGGI 830 (1049)
Q Consensus 760 G~ll~vD~A~~~a~~gl~~Pg~~--------GaDi~~~s~hK~f~~P~g~GG-Pg~G~i~~~~~l~~~lpg~~vg~t~~~ 830 (1049)
|+++|+|++ +.|+.+.|.+ -+|++++ .|.++ +|. | +|.++++++++..+.....
T Consensus 294 g~lLI~DEV----~TGfGRtG~~~a~e~~gv~PDivtl--gK~lg----gG~~P-igAv~~~~~i~d~~~~~~~------ 356 (504)
T PLN02760 294 DILFIADEV----ICAFGRLGTMFGCDKYNIKPDLVSL--AKALS----SAYMP-IGAVLVSPEISDVIHSQSN------ 356 (504)
T ss_pred CCEEEecch----hhCCcccchhhHHHhcCCCCcEEEe--ccccc----CCccc-cceEeecHHHHhhhhcccc------
Confidence 999999987 4566555532 3798877 48763 443 5 4447777777665421100
Q ss_pred CCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc--CCee--eccCCCceeeEEE
Q 001586 831 PAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPIL--FRGVNGTVAHEFI 906 (1049)
Q Consensus 831 ~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~--~~v~--~~g~~g~~~~e~i 906 (1049)
..... ...+++.|+++.++++.+.|..+.++++. ++..++.++|.++|+++ +.++ +.|. | .+..+-
T Consensus 357 ----~~~~~-~h~~T~~gnPl~~Aaala~Le~i~~~~l~---~~~~~~g~~l~~~L~~l~~~~~v~~vrG~-G-l~~gie 426 (504)
T PLN02760 357 ----KLGSF-AHGFTYSGHPVSCAVALEALKIYKERNIP---EHVNKIAPRFQDGIKAFSGSPIIGEIRGT-G-LILGTE 426 (504)
T ss_pred ----cccCc-ccCCCCCCCHHHHHHHHHHHHHHHhCCHH---HHHHHHHHHHHHHHHHHhcCCCeeeEEeC-c-eEEEEE
Confidence 00000 01112345777788888889888776554 45557788888888764 2221 1221 2 221222
Q ss_pred EeccCccccCCC-----CHHHHHHHHHHCCcccCCCCCCCCCEEEEEccCCCCHHHHHHHHHHHHHHHHHHH
Q 001586 907 VDLRGLKNTAGI-----EPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIA 973 (1049)
Q Consensus 907 v~~~~~~~~~g~-----~~~~v~k~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~eeid~fv~aL~~i~~~i~ 973 (1049)
+.-+.-.. ... -...+.+.|.++|+.+... ++.+|++|+..+|++|||+++++|.+++.+++
T Consensus 427 ~~~~~~~~-~~~~~~~~~~~~i~~~~~~~Gvl~~~~----g~~lrl~Ppl~it~eeid~~~~~l~~al~~~~ 493 (504)
T PLN02760 427 FVDNKSPN-DPFPAEWGVGAYFGAECKKRGMLVRVA----GDNIMMSPPLIITPEEVDELISIYGKALKATE 493 (504)
T ss_pred EecCCccc-ccccchhHHHHHHHHHHHhCCcEEEec----CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 21110000 000 0345778888999987532 36899999999999999999999998887763
No 200
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.68 E-value=1.8e-15 Score=183.76 Aligned_cols=282 Identities=12% Similarity=0.086 Sum_probs=196.1
Q ss_pred HHHHHHHHHHHHHhCCCCcceEeccchHHHHHHHHHHhhhccCCCCEEEEcCCCCHHHHHH-HHHhhcCCCeEEEEeCc-
Q 001586 211 ESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDI-CITRADGFDIKVVVSDL- 288 (1049)
Q Consensus 211 e~l~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a~~~~~~~g~~Vlv~~~~Hps~~~~-l~~~a~~~gi~v~~v~~- 288 (1049)
..+.++|+.+|+++|++.+.+ +++|+|++..++++|.. . +||+||+++++|.|+... +. -.|.+.+++.+
T Consensus 174 G~i~eAq~~AA~~fgAd~tyF-lvNGTS~gn~a~i~a~~-~--~Gd~VLvdRN~HKSv~hgaLi----LsGa~PVYl~P~ 245 (720)
T PRK13578 174 GAAKDAQKHAAKVFNADKTYF-VLNGTSASNKVVTNALL-T--PGDLVLFDRNNHKSNHHGALI----QAGATPVYLETA 245 (720)
T ss_pred hHHHHHHHHHHHHhCCCceEE-EeCChhHHHHHHHHHhc-C--CCCEEEeecccHHHHHHHHHH----HcCCeEEEeecc
Confidence 368899999999999998655 77899999999988754 3 899999999999999975 42 24777777643
Q ss_pred ------------ch-----hhc-cC---CC-------EeEEEEEcCCCCeeeccHHHHHHH-HHhCCcEEEEE----ecc
Q 001586 289 ------------KD-----IDY-KS---GD-------VCGVLVQYPGTEGEVLDYGDFIKN-AHANGVKVVMA----TDL 335 (1049)
Q Consensus 289 ------------~~-----l~~-l~---~~-------t~~V~v~~pn~~G~i~di~~I~~~-ah~~galliV~----a~~ 335 (1049)
++ +++ +. ++ .++|++|+||++|.+.|+++|+++ +|.++ .++|+ ++.
T Consensus 246 ~n~~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pTYdG~~ydi~~I~~~~~h~~~-~llvDEAhgah~ 324 (720)
T PRK13578 246 RNPFGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGTYDGTIYNARQVVDKIGHLCD-YILFDSAWVGYE 324 (720)
T ss_pred ccccCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECCCCcceeecHHHHHHHhhccCC-cEEEeCcchhhh
Confidence 12 333 21 22 689999999999999999999999 68888 88883 222
Q ss_pred ccccC---C-CCCCcccce----EEEecC-ccccccCCCCCCceEEEEEchhHHhcCCCceeeeeecCCCCcceeeeccc
Q 001586 336 LALTI---L-KPPGELGAD----IVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQT 406 (1049)
Q Consensus 336 ~alg~---l-~~p~~~GaD----ivvgs~-k~lg~P~~~GGP~~G~l~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqt 406 (1049)
.-... + ....+.||| +|+.|. |.++. +. +++++.++++.++ |.+.|
T Consensus 325 ~F~p~~~~~p~~al~~GaD~p~i~v~QStHKtL~a-lT----QaS~LHvk~~~i~--------------g~~~~------ 379 (720)
T PRK13578 325 QFIPMMADCSPLLLELNENDPGIFVTQSVHKQQAG-FS----QTSQIHKKDNHIK--------------GQARY------ 379 (720)
T ss_pred ccCcccccCChhhhhcCCCCCCeEEEEChhhcchh-hh----hHhhhhcCCcccc--------------ccccc------
Confidence 11121 1 112578999 999999 55542 22 4567766544311 11000
Q ss_pred ccccccccccCCCccchhHHHHHHHHHHH--HHh-CcchHHHHHHHHHHHHHHHHHHh-hcCCCeEEcCC----------
Q 001586 407 REQHIRRDKATSNICTAQALLANMAAMYA--VYH-GPEGLKTIAQRVHGLAGTFALGL-KKLGTVEVQGL---------- 472 (1049)
Q Consensus 407 req~irrekaTsni~t~~~l~a~~aa~y~--~~~-g~~Gl~~ia~~~~~~a~~l~~~L-~~~g~~~v~~~---------- 472 (1049)
-.|-|...+-.-..|+++.|.++|++-. .++ ++.| +++.+++.+.+..+++.| +.+.+++++.+
T Consensus 380 -v~~~r~~~al~m~qSTSPsY~LmASLDva~~~m~~~~G-~~l~~~~i~~a~~~R~~l~~~~~~~~~~~p~~v~~~~~~~ 457 (720)
T PRK13578 380 -CPHKRLNNAFMLHASTSPFYPLFAALDVNAKMHEGESG-RRLWMECVKLGIEARKLILARCKLIRPFIPPVVDGKPWQD 457 (720)
T ss_pred -CCHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHhhC-HHHHHHHHHHHHHHHHHHHHhCCCeeeccccccccccccc
Confidence 0111222232334466899999999832 222 2234 567778888889999988 55544777621
Q ss_pred -------------------C------------Ccce--EEEecCC--------------HHHHHHHHHHcCCeeeeecCC
Q 001586 473 -------------------P------------FFDT--VKVKCAD--------------AHAIASAAYKIEMNLRVVDSN 505 (1049)
Q Consensus 473 -------------------~------------~~~~--v~i~~~~--------------~~~v~~~L~~~gI~~~~~~~~ 505 (1049)
. ..|+ ++|.+++ +..+.+.|+++||.+...+..
T Consensus 458 ~~~~~~~~~~~~w~~~p~~~whgf~~~~~~~~~lDP~KltI~t~G~~~~~G~~~~~Gipg~~l~~~L~e~gI~~E~~d~~ 537 (720)
T PRK13578 458 YPTEQIASDLRFFSFEPGEKWHGFEGYAEDQYFVDPCKLLLTTPGIDAETGEYEDFGIPATILANYLRENGIVPEKCDLN 537 (720)
T ss_pred CchhhhcccccccccccCccccccccccccccccCCceEEEEcCCcCcccccccccCccHHHHHHHHHHcCCEEEecCCC
Confidence 0 1243 4554443 368999998889999998889
Q ss_pred eEEEEeccCCCHHHHHHHHHHHh
Q 001586 506 TVTASFDETTTLEDVDKLFIVFA 528 (1049)
Q Consensus 506 ~vris~~~~~t~edid~lv~aL~ 528 (1049)
.+.+-++..+|++++++|+++|.
T Consensus 538 ~vL~l~s~g~t~~~~~~Lv~aL~ 560 (720)
T PRK13578 538 SILFLLTPAEDMAKLQQLVAMLA 560 (720)
T ss_pred eEEEEeCCCCCHHHHHHHHHHHH
Confidence 99999999999999999999996
No 201
>PRK06541 hypothetical protein; Provisional
Probab=99.67 E-value=4e-14 Score=168.28 Aligned_cols=310 Identities=16% Similarity=0.180 Sum_probs=192.5
Q ss_pred HHHHHHHHHHhhCCCc-cccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEE-EcCCCCCccHHHHHhcCC---------
Q 001586 634 FNNLGEWLCTITGFDS-FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGM--------- 702 (1049)
Q Consensus 634 i~el~~~la~l~G~~~-~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VL-ip~saHg~~pa~a~~~G~--------- 702 (1049)
..++.+.|++++..+. ..++.+||+++++++++.+|.|+..+|.++|.+|| +..++||....+....|.
T Consensus 97 ~~~la~~l~~~~p~~~~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~ 176 (460)
T PRK06541 97 AIELAERLAALAPGDLNRVFFTTGGSEAVESAWKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGALAITGLPAFKAPFEP 176 (460)
T ss_pred HHHHHHHHHHhCCCCcCEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCccEEEEEcCcccCcchhhhcCcCChhhccccCC
Confidence 4477888888875321 24678999999999999999987655544466776 678899987665433221
Q ss_pred ---EEEEEcCCCCCC-----CC--------HHHHHHHHHhc-CCCeEEEEEEcC-Cccccccc---cHHHHHHHHHHcCC
Q 001586 703 ---KIVSVGTDAKGN-----IN--------IEELRKAAEAN-RDNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGG 761 (1049)
Q Consensus 703 ---~Vv~V~~d~~g~-----iD--------~~~L~~~i~~~-~~~taaV~it~P-n~~G~i~~---di~eI~~lah~~G~ 761 (1049)
.+..+|.....+ .| ++++++.++++ .+++++|+++.. +..|.+.+ .+++|.++|+++|+
T Consensus 177 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~ 256 (460)
T PRK06541 177 LVPGGFRVPNTNFYRAPELGDDPEAFGRWAADRIEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDV 256 (460)
T ss_pred CCCCcEEeCCCccccccccCCCHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCC
Confidence 233444321111 12 46788888653 356777766543 45677751 29999999999999
Q ss_pred EEEEeccccccccCcCCCCcc--------CCcEEEeCCCcccccCCCCCCC-ceeEEEEcccccccCCCCccccCCCCCC
Q 001586 762 QVYMDGANMNAQVGLTSPGYI--------GADVCHLNLHKTFCIPHGGGGP-GMGPIGVKKHLAPFLPSHPVVSTGGIPA 832 (1049)
Q Consensus 762 ll~vD~A~~~a~~gl~~Pg~~--------GaDi~~~s~hK~f~~P~g~GGP-g~G~i~~~~~l~~~lpg~~vg~t~~~~~ 832 (1049)
++++|+++ .|+.+.|.+ -+|++++ .|.++ ||- .+|.++++++++..+....
T Consensus 257 llI~DEV~----tGfGR~G~~~a~~~~gv~PDivt~--gK~l~-----~G~~pigav~~~~~i~~~~~~~~--------- 316 (460)
T PRK06541 257 LLVSDEVI----CAFGRLGEMFGCERFGYVPDIITC--AKGIT-----SGYSPLGAMIASDRLFEPFLDGP--------- 316 (460)
T ss_pred EEEEechh----hCCCcCchhhhhhhcCCCCCEEEe--ccccc-----CCccceeEEEEcHHHHHHhhcCC---------
Confidence 99999974 344444432 3688876 57663 442 3677777777665432100
Q ss_pred CCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc--CCee--eccCCCcee-eEEEE
Q 001586 833 PEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPIL--FRGVNGTVA-HEFIV 907 (1049)
Q Consensus 833 ~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~--~~v~--~~g~~g~~~-~e~iv 907 (1049)
..... .+++.|+++.++++.+.|..+..+++. ++..++.++|.++|+++ +.++ ..|. |..+ .+|+-
T Consensus 317 ----~~~~~-~~T~~gnp~~~aaala~l~~l~~~~~~---~~~~~~g~~l~~~L~~l~~~~~v~~vrg~-Gl~~~ie~~~ 387 (460)
T PRK06541 317 ----TMFLH-GYTFGGHPVSAAVALANLDIFEREGLL---DHVRDNEPAFRATLEKLLDLPIVGDVRGD-GYFYGIELVK 387 (460)
T ss_pred ----Ccccc-CCCCCCCHHHHHHHHHHHHHHHhccHH---HHHHHHHHHHHHHHHHhhcCCCeEEEEec-ceEEEEEEec
Confidence 00000 112345667777788888887766654 45557788999999875 2221 2232 3221 12211
Q ss_pred eccC---ccccC-C-CCHHHHHHHHHHCCcccCCCCCCCCCEEEEEccCCCCHHHHHHHHHHHHHHHHHHH
Q 001586 908 DLRG---LKNTA-G-IEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIA 973 (1049)
Q Consensus 908 ~~~~---~~~~~-g-~~~~~v~k~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~eeid~fv~aL~~i~~~i~ 973 (1049)
+... +.... . .-...+.++|.++|+.+..... -.+.+|++|+..+|++|||+++++|.+++.++.
T Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~-g~~~lrl~Ppl~~t~~~id~~~~~l~~~l~~~~ 457 (460)
T PRK06541 388 DKATKETFTDDESERLLRGFLSPALFEAGLYCRADDR-GDPVVQLAPPLISGQEEFDEIEQILRSVLTEAW 457 (460)
T ss_pred CcccccCCcchhhhhhHHHHHHHHHHhCCeEEEecCC-CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 1100 00000 0 0012567888999999753211 136899999999999999999999999987653
No 202
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.67 E-value=3.3e-14 Score=166.82 Aligned_cols=290 Identities=18% Similarity=0.270 Sum_probs=190.6
Q ss_pred HHHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhc-CC-CCCCEEEE-cCCCCCccHHHHHhcC---------
Q 001586 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKAR-GD-HHRNVCII-PVSAHGTNPATAAMCG--------- 701 (1049)
Q Consensus 634 i~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~-G~-~~r~~VLi-p~saHg~~pa~a~~~G--------- 701 (1049)
..++++.|++++|.+. .++.+||++++++++.++|.|+..+ |. +++++|+. ..+.||..-......|
T Consensus 81 ~~~l~~~l~~~~~~~~-~~~~~SGs~A~e~ai~~a~~~~~~~~~~~~~~~~i~~~~~~yhg~~~~~~~~~~~~~~~~~~~ 159 (401)
T TIGR01885 81 FGEFAEYVTKLFGYDK-VLPMNTGAEAVETAIKLARKWGYKVKGIPENQAIIVSAKGNFHGRTLGAISMSTDPDSRTNFG 159 (401)
T ss_pred HHHHHHHHHhhcCCCE-EEEeCccHHHHHHHHHHHHHHhhhhcCCCCCCCEEEEECCCcCcccHHHHhCcCCcccccccC
Confidence 4578899999998765 4778999999999999988875322 22 23556664 4566876544433322
Q ss_pred ---CEEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-Cccccccc---cHHHHHHHHHHcCCEEEEecccccccc
Q 001586 702 ---MKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQV 774 (1049)
Q Consensus 702 ---~~Vv~V~~d~~g~iD~~~L~~~i~~~~~~taaV~it~P-n~~G~i~~---di~eI~~lah~~G~ll~vD~A~~~a~~ 774 (1049)
..++.++. .|+++|+++++++.+++++|+++.+ +..|.+.+ .+++|.++|++||+++++|+++. +
T Consensus 160 ~~~~~~~~~~~-----~d~~~le~~l~~~~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~-g-- 231 (401)
T TIGR01885 160 PYVPGFKKIPY-----NNLEALEEALEDHGPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQT-G-- 231 (401)
T ss_pred CCCCCceEeCC-----CCHHHHHHHHHhcCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh-C--
Confidence 12344444 3799999999766678888888766 45787763 39999999999999999999863 2
Q ss_pred CcCCCC--------ccCCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccc
Q 001586 775 GLTSPG--------YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAP 846 (1049)
Q Consensus 775 gl~~Pg--------~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~ 846 (1049)
+.+.| .+.+|++++ .|.|+ +||..+|+++.++++.+.+.... .+.+ +
T Consensus 232 -~g~~G~~~~~~~~~~~~di~~~--gK~l~----~g~~~ig~v~~~~~i~~~~~~~~---------------~~~t---~ 286 (401)
T TIGR01885 232 -LGRTGKLLCVDHENVKPDIVLL--GKALS----GGVYPVSAVLADDDVMLTIKPGE---------------HGST---Y 286 (401)
T ss_pred -CCccchhhHHhhcCCCCCEEEe--ecccc----CCCCCcEEEEEcHHHHhhccCCC---------------CCCC---C
Confidence 22222 235788876 38764 45566888888877766542110 0001 1
Q ss_pred hhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc-CCee--eccCCCceeeEEEEeccCccccCCCCHHHH
Q 001586 847 WGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPIL--FRGVNGTVAHEFIVDLRGLKNTAGIEPEDV 923 (1049)
Q Consensus 847 ~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~-~~v~--~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v 923 (1049)
.+++..+.++.+.|..+..+++. ++...+++++.++|+++ ..+. ..| .| .+..+.++.+. .+.+..++
T Consensus 287 ~~~p~~~~aa~a~L~~i~~~~l~---~~~~~~~~~~~~~L~~l~~~~~~~~~g-~g-~~~~i~~~~~~----~~~~~~~l 357 (401)
T TIGR01885 287 GGNPLACAVAVAALEVLEEEKLA---ENAEKLGEIFRDQLKKLPKPIITEVRG-RG-LLNAIVIDESK----TGRTAWDL 357 (401)
T ss_pred CCCHHHHHHHHHHHHHHHhccHH---HHHHHHHHHHHHHHHhccCCceeEEee-cC-eeEEEEeccCc----chhHHHHH
Confidence 12334455566677777655554 34556689999999875 2331 112 12 22222333210 01246789
Q ss_pred HHHHHHCCcccCCCCCCCCCEEEEEccCCCCHHHHHHHHHHHHHHH
Q 001586 924 AKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIR 969 (1049)
Q Consensus 924 ~k~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~eeid~fv~aL~~i~ 969 (1049)
.++|.++|+.+.... .+.+|++|+...|++|||+++++|.+++
T Consensus 358 ~~~l~~~Gv~v~~~~---~~~lRi~p~l~~t~~~i~~~l~~l~~~l 400 (401)
T TIGR01885 358 CLKLKEKGLLAKPTH---GNIIRLAPPLVITEEQLDEGLEIIKKVI 400 (401)
T ss_pred HHHHHhCCEEEEecC---CCEEEEeCCccCCHHHHHHHHHHHHHHh
Confidence 999999999874322 4789999999999999999999998764
No 203
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.67 E-value=1.2e-14 Score=169.73 Aligned_cols=298 Identities=13% Similarity=0.133 Sum_probs=182.4
Q ss_pred HHHHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCEEEEEcCCCC
Q 001586 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK 712 (1049)
Q Consensus 633 ~i~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~Vv~V~~d~~ 712 (1049)
...++++.+++++|.+.+ +..++|..+..+++.++. +++|+||+++..|++.-..+.+.+.++++++.+
T Consensus 44 ~~~~LE~~lA~~~g~e~a-l~~~sG~~a~~~~i~~l~--------~~GD~Vl~~~~~h~s~~~~~~l~~~~~~~~~~~-- 112 (392)
T PLN03227 44 AHLELEQCMAEFLGTESA-ILYSDGASTTSSTVAAFA--------KRGDLLVVDRGVNEALLVGVSLSRANVRWFRHN-- 112 (392)
T ss_pred HHHHHHHHHHHHhCCCcE-EEecCcHHHHHHHHHHhC--------CCCCEEEEeccccHHHHHHHHHcCCeEEEeCCC--
Confidence 355889999999998754 556666555544444431 367899999988876655566778888888763
Q ss_pred CCCCHHHHHHHHHhc-----------CCCeEEEEEEcC-CccccccccHHHHHHHHHHcCCEEEEeccccccccCcCCC-
Q 001586 713 GNINIEELRKAAEAN-----------RDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSP- 779 (1049)
Q Consensus 713 g~iD~~~L~~~i~~~-----------~~~taaV~it~P-n~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~P- 779 (1049)
|++++++.+++. .++++.|+++.+ |..|.+. |+++|+++|+++|+++++|+++..+ .+...
T Consensus 113 ---d~~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v~~~~G~i~-~l~~i~~l~~~~g~~livDe~~~~g--~~g~~G 186 (392)
T PLN03227 113 ---DMKDLRRVLEQVRAQDVALKRKPTDQRRFLVVEGLYKNTGTLA-PLKELVALKEEFHYRLILDESFSFG--TLGKSG 186 (392)
T ss_pred ---CHHHHHHHHHHhhhhccccccccCCCcEEEEEcCCcCCCCccc-CHHHHHHHHHHcCCEEEEECccccc--ccCCCC
Confidence 556666544322 236888888887 4688887 7999999999999999999987532 22221
Q ss_pred ----------CccCCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhh
Q 001586 780 ----------GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGS 849 (1049)
Q Consensus 780 ----------g~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~ 849 (1049)
...++|+++++++|.+ ||.+|++++++++...+... + +.. +.+.+. +
T Consensus 187 ~g~~~~~g~~p~~~~Div~~slsk~~-------g~~gg~v~~~~~~~~~~~~~--~-------~~~---~~~~~~----~ 243 (392)
T PLN03227 187 RGSLEHAGLKPMVHAEIVTFSLENAF-------GSVGGMTVGSEEVVDHQRLS--G-------SGY---CFSASA----P 243 (392)
T ss_pred CcHHHHcCCCCCCCceEEEeechhhh-------hccCcEEecCHHHHHHHHHh--C-------cCc---cccCCC----C
Confidence 1346799999988865 36667887787655432100 0 000 001111 1
Q ss_pred HHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc-CCeee--ccC----CCceeeEEEEeccCccccC----CC
Q 001586 850 ALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILF--RGV----NGTVAHEFIVDLRGLKNTA----GI 918 (1049)
Q Consensus 850 ~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~-~~v~~--~g~----~g~~~~e~iv~~~~~~~~~----g~ 918 (1049)
+..+.++.+.+..+.. ..+..++..+++++|+++|++. +.... .|. .....+.+.+.+.+.+... ..
T Consensus 244 p~~~~aa~~al~~~~~--~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~rg~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~ 321 (392)
T PLN03227 244 PFLAKADATATAGELA--GPQLLNRLHDSIANLYSTLTNSSHPYALKLRNRLVITSDPISPIIYLRLSDQEATRRTDETL 321 (392)
T ss_pred HHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHhcCCccccccccccccCCCCCCCEEEEEeCCHHHhhhhhhhh
Confidence 1222222223322211 1234566778899999999752 22110 000 0001111233332100000 00
Q ss_pred CHHHHHHHHHHCCcccCCCC------CC-C-CCEEEEEccCCCCHHHHHHHHHHHHHHHHHH
Q 001586 919 EPEDVAKRLMDYGFHGPTMS------WP-V-PGTLMIEPTESESKEELDRYCDALISIREEI 972 (1049)
Q Consensus 919 ~~~~v~k~L~~~Gi~~~~~~------~p-~-~~~lri~~t~~~t~eeid~fv~aL~~i~~~i 972 (1049)
...++.++|.++|+.+.... .| + +..+|++++..+|++|||+++++|+++++++
T Consensus 322 ~~~~~~~~~~~~Gi~~~~~~~~~~~~~~~~P~~~iR~~~~~~~t~eei~~~~~~l~~~~~~~ 383 (392)
T PLN03227 322 ILDQIAHHSLSEGVAVVSTGGHVKKFLQLVPPPCLRVVANASHTREDIDKLLTVLGEAVEAI 383 (392)
T ss_pred HHHHHHHHHHHCCCEEEecccccCCcCCCCCCceEEEEecCCCCHHHHHHHHHHHHHHHHHH
Confidence 12488899999999863211 11 1 5789999999999999999999999988764
No 204
>PLN02263 serine decarboxylase
Probab=99.67 E-value=4.2e-14 Score=165.17 Aligned_cols=332 Identities=15% Similarity=0.101 Sum_probs=208.4
Q ss_pred HHHHHHHHHHhcCCCccccccCCCCCCCCC-cHHHH---HHHHhCCccccccCCChhhHhhhHHHHHHHHHHHHHHHhCC
Q 001586 151 SQMIEHMQKLASMNKVYKSFIGMGYYNTHV-PPVIL---RNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGL 226 (1049)
Q Consensus 151 ~e~~~~~~~la~~n~~~~~~lG~g~y~~~~-p~~i~---~~~~~~~~~~t~ytpyq~e~sqg~le~l~e~q~~ia~L~G~ 226 (1049)
.++++.+.+.-..+... |+|- .++.-. +..+. ...+.|-+.-..+.||+- ++.+...+.-.++++|+|+
T Consensus 76 ~~~l~~~~~~~~~~~~~--~~gY-p~n~~~d~s~l~~~l~~~~nN~Gdp~~~s~~~~----~s~~~E~~Vi~wla~L~g~ 148 (470)
T PLN02263 76 ASVLARYRKTLVERTKH--HLGY-PYNLDFDYGALGQLQHFSINNLGDPFIESNYGV----HSRQFEVGVLDWFARLWEI 148 (470)
T ss_pred HHHHHHHHHHHHhcccc--eeCC-CCcccCChhhHHHHHHhhccCCCCccccCCcch----hHHHHHHHHHHHHHHHhCC
Confidence 45556666555544332 5552 222223 33332 122234343223344421 3445555666899999999
Q ss_pred CCc--ceEeccchHHHHHHHHHHhhhcc--CCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc--------chhhc-
Q 001586 227 PMS--NASLLDEGTAAAEAMAMCNNIQK--GKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--------KDIDY- 293 (1049)
Q Consensus 227 ~~~--n~sl~~~~Ta~~eA~~~a~~~~~--~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~~--------~~l~~- 293 (1049)
+.. ...+++||| |+.++|+...| .++..+++|+..|.|+.+.++. +|++++.|+. ++|++
T Consensus 149 p~~~~~G~vtsGGT---EaNL~Al~aARe~~~~~vvy~S~~aH~Sv~KAa~l----lgi~~~~Vp~d~~g~mD~~aL~~a 221 (470)
T PLN02263 149 EKNEYWGYITNCGT---EGNLHGILVGREVFPDGILYASRESHYSVFKAARM----YRMECVKVDTLVSGEIDCADFKAK 221 (470)
T ss_pred CCCCCeEEEeCcHH---HHHHHHHHHHHhhcCCcEEEEcCCccHHHHHHHHh----cCCcceEeccCCCCcCcHHHHHHH
Confidence 753 577889998 44444432221 1344788999999999988754 5778887765 34554
Q ss_pred cCCC---EeEEEEEcC-CCCeeeccHHHHHHHHHhCCc-----EEEEEeccccccC--CCC-C---CcccceEEEecC-c
Q 001586 294 KSGD---VCGVLVQYP-GTEGEVLDYGDFIKNAHANGV-----KVVMATDLLALTI--LKP-P---GELGADIVVGSA-Q 357 (1049)
Q Consensus 294 l~~~---t~~V~v~~p-n~~G~i~di~~I~~~ah~~ga-----lliV~a~~~alg~--l~~-p---~~~GaDivvgs~-k 357 (1049)
+..+ ...|+.+.+ +.+|.++||++|+++|+++|. +++|++-.-+..+ +.. | +..+||-+..++ |
T Consensus 222 I~~d~~~P~iVvataGTT~~GAiDpi~eIa~i~~~~g~~~~~iwlHVDAA~GG~~lPf~~~~~~~df~~~vDSIsvD~HK 301 (470)
T PLN02263 222 LLANKDKPAIINVNIGTTVKGAVDDLDLVIKTLEECGFSQDRFYIHCDGALFGLMMPFVKRAPKVTFKKPIGSVSVSGHK 301 (470)
T ss_pred HHhCCCCcEEEEEEecCCCCcCCCCHHHHHHHHHHcCCccCCeeEEEeccchhhHhhhcccccccCCCcCccEEEECCcc
Confidence 5333 456666776 579999999999999999997 9999552222111 111 1 223599999999 6
Q ss_pred cccccCCCCCCceEEEEEchhHHhcCCCceeeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHH
Q 001586 358 RFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVY 437 (1049)
Q Consensus 358 ~lg~P~~~GGP~~G~l~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irrekaTsni~t~~~l~a~~aa~y~~~ 437 (1049)
+++.|++ +|++.+|+++.+.+.-. ..|-- .++..+ .++-+- ...+.+-++ +..
T Consensus 302 ~l~~P~~-----cgvll~R~~~~~~~~~~-----------~~Yl~---~~d~ti---~gSR~g---~~al~lW~~--L~~ 354 (470)
T PLN02263 302 FVGCPMP-----CGVQITRMEHINVLSSN-----------VEYLA---SRDATI---MGSRNG---HAPIFLWYT--LNR 354 (470)
T ss_pred ccCCCcC-----EEEEEEehhhHhhhccC-----------hHhhC---CCCCCc---CCCCCc---HHHHHHHHH--HHH
Confidence 6677875 67788887665433110 00100 000000 011111 111222222 489
Q ss_pred hCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEcCCCCcceEEEecCCHHHHHHHHHHcCCeeeeecCCeEEEEeccCCCH
Q 001586 438 HGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTL 517 (1049)
Q Consensus 438 ~g~~Gl~~ia~~~~~~a~~l~~~L~~~g~~~v~~~~~~~~v~i~~~~~~~v~~~L~~~gI~~~~~~~~~vris~~~~~t~ 517 (1049)
+|.+|++++.+++.++|+++.++|+++| +.++..|...+|+|..+... ...+|+.+... ++.++++++...|+
T Consensus 355 ~G~~G~~~~i~~~~~~A~~l~~~l~~~g-~~~~~~p~s~~V~f~~p~~~-----~~~~gW~L~~~-~~~~Hivvmphv~~ 427 (470)
T PLN02263 355 KGYRGFQKEVQKCLRNAHYLKDRLREAG-ISAMLNELSSTVVFERPKDE-----EFVRRWQLACQ-GNIAHVVVMPSVTI 427 (470)
T ss_pred hCHHHHHHHHHHHHHHHHHHHHHHHhCC-CeEEeCCCceEEEEecCchH-----HhhcceEEccC-CCcEEEEEcCCCCH
Confidence 9999999999999999999999999997 77765566667888655321 23578888763 45799999999999
Q ss_pred HHHHHHHHHHhCC
Q 001586 518 EDVDKLFIVFAGG 530 (1049)
Q Consensus 518 edid~lv~aL~~~ 530 (1049)
+.||+|++.|...
T Consensus 428 ~~id~fi~DL~~~ 440 (470)
T PLN02263 428 EKLDYFLKELVEK 440 (470)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999999754
No 205
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.67 E-value=1.4e-14 Score=167.83 Aligned_cols=271 Identities=20% Similarity=0.137 Sum_probs=182.8
Q ss_pred HHHHHHHHHHhCCCCcceEeccchHHHHHHHHHHhhhccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCcchhh-
Q 001586 214 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKDID- 292 (1049)
Q Consensus 214 ~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a~~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~~~~l~- 292 (1049)
.++++.+|++.+ .++.++.+|++++.+++.++ .. +||+||++...|..+...++..++..|++++.++.++..
T Consensus 54 ~~Le~~lA~l~~---~~~v~~~sG~~Ai~~~l~al-l~--~Gd~Vl~~~~~y~~~~~~~~~~l~~~G~~v~~v~~~~~~~ 127 (366)
T PRK07582 54 RALEAALGELEG---AEALVFPSGMAAITAVLRAL-LR--PGDTVVVPADGYYQVRALAREYLAPLGVTVREAPTAGMAE 127 (366)
T ss_pred HHHHHHHHHHcC---CCEEEECCHHHHHHHHHHHh-cC--CCCEEEEeCCCcHhHHHHHHHHHhcCeEEEEEECCCChHH
Confidence 446678999982 35667888888777666654 23 889999999999887776654456689999999875433
Q ss_pred ccCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCCCCCce
Q 001586 293 YKSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGGPHA 370 (1049)
Q Consensus 293 ~l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~p~~~GaDivvgs~-k~lg~P~~~GGP~~ 370 (1049)
.+.+++++|++++| |++|.+.|+++|+++||++|++++|+. .++......|.++|+||+++|. |++++|- |--+
T Consensus 128 ~~~~~t~lV~le~p~NPtg~v~di~~I~~~a~~~g~~lvVD~-t~~~~~~~~p~~~g~Divv~S~sK~l~G~~---g~~~ 203 (366)
T PRK07582 128 AALAGADLVLAETPSNPGLDVCDLAALAAAAHAAGALLVVDN-TTATPLGQRPLELGADLVVASDTKALTGHS---DLLL 203 (366)
T ss_pred HhccCceEEEEECCCCCCCCccCHHHHHHHHHHcCCEEEEEC-CCCCccccCchhcCCcEEEecccccccCCC---CeeE
Confidence 34468999999998 688999999999999999999999943 3332333456779999999998 7665432 2225
Q ss_pred EEEEEc-hhHHhcCCCceeeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcchHHHHHHH
Q 001586 371 AFLATS-QEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQR 449 (1049)
Q Consensus 371 G~l~~~-~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irrekaTsni~t~~~l~a~~aa~y~~~~g~~Gl~~ia~~ 449 (1049)
|+++++ +++.+++.. .|+..+ ++..++ .+ |+...|-+-+....++
T Consensus 204 G~v~~~~~~l~~~l~~-------------------------~~~~~g----~~~~~~---~a--~l~~r~l~tl~~R~~~ 249 (366)
T PRK07582 204 GYVAGRDPELMAAVER-------------------------WRLLAG----AIPGPF---EA--WLAHRSLGTLGLRFAR 249 (366)
T ss_pred EEEEcCcHHHHHHHHH-------------------------HHHHhC----CCCCHH---HH--HHHHhccccHHHHHHH
Confidence 888875 455443310 011101 001121 11 2234444455666678
Q ss_pred HHHHHHHHHHHhhcCCCeEE-c-C--C--C-----------CcceEEEecCCHHHHHHHHHHcCCeee--------e---
Q 001586 450 VHGLAGTFALGLKKLGTVEV-Q-G--L--P-----------FFDTVKVKCADAHAIASAAYKIEMNLR--------V--- 501 (1049)
Q Consensus 450 ~~~~a~~l~~~L~~~g~~~v-~-~--~--~-----------~~~~v~i~~~~~~~v~~~L~~~gI~~~--------~--- 501 (1049)
..+++..+++.|++...++- . + + | +...|+|.+++.+++.+.|...++... .
T Consensus 250 ~~~na~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~gg~~s~~~~~~~~~~~~~~~l~~~~~~~s~G~~~sl~~ 329 (366)
T PRK07582 250 QCANALAVAELLAGHPAVRGVRYPGLPGDPAHEVAARQMRRFGGLVSFELADAAAAERFVAASRLVVAATSFGGVHTSAD 329 (366)
T ss_pred HHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHhhCCCCcceEEEEeCCHHHHHHHHHhCCcceecccCCCccchhh
Confidence 88999999999998754532 2 1 1 2 223577777665556666666566431 1
Q ss_pred --------ecCCeEEEEeccCCCHHHHHHHHHHHh
Q 001586 502 --------VDSNTVTASFDETTTLEDVDKLFIVFA 528 (1049)
Q Consensus 502 --------~~~~~vris~~~~~t~edid~lv~aL~ 528 (1049)
+.++.||+|++..++++.|++|.++|.
T Consensus 330 ~~~~~~~~~~~~liR~svGlE~~~dli~dl~~al~ 364 (366)
T PRK07582 330 RRARWGDAVPEGFVRLSCGIEDTDDLVADLERALD 364 (366)
T ss_pred hHHHcCCCCCCCeEEEEeccCCHHHHHHHHHHHHh
Confidence 124679999999999999999999985
No 206
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.67 E-value=3.5e-14 Score=167.58 Aligned_cols=296 Identities=19% Similarity=0.225 Sum_probs=185.6
Q ss_pred HHHHHHHHHHhh----CCC-ccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEE-EcCCCCCccHHHHHhc-------
Q 001586 634 FNNLGEWLCTIT----GFD-SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMC------- 700 (1049)
Q Consensus 634 i~el~~~la~l~----G~~-~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VL-ip~saHg~~pa~a~~~------- 700 (1049)
..++.+.|++++ +++ .+.+..+||+++++++++.+|.| . +|.+|| +..++||....+....
T Consensus 84 ~~~lae~l~~~~~~~~~~~~~~~f~~~sGseA~e~AlklAr~~---t---gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~ 157 (425)
T PRK09264 84 KREFLETFEETILKPRGLDYKVQFTGPTGTNAVEAALKLARKV---T---GRTNIVAFTNGFHGMTLGSLAVTGNSHKRQ 157 (425)
T ss_pred HHHHHHHHHHhhcCCcCCCceEEEeCCCHHHHHHHHHHHHHHh---c---CCCeEEEECCccCCccHHHHHhcCCccccc
Confidence 346777888865 233 23344689999999999999887 2 345666 6788999876553321
Q ss_pred --CC---EEEEEcCCCCC---CCCHHHHHHHHHhcC---CCeEEEEEEcC-Cccccccc---cHHHHHHHHHHcCCEEEE
Q 001586 701 --GM---KIVSVGTDAKG---NINIEELRKAAEANR---DNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGGQVYM 765 (1049)
Q Consensus 701 --G~---~Vv~V~~d~~g---~iD~~~L~~~i~~~~---~~taaV~it~P-n~~G~i~~---di~eI~~lah~~G~ll~v 765 (1049)
|. .++.+|..... .-|+++|++.++++. +++++|+++.. +..|++.+ .+++|+++|++||+++++
T Consensus 158 ~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~ 237 (425)
T PRK09264 158 GAGVPLNNVTRMPYDGYFGGDVDTLAYLEKLLEDSSSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIV 237 (425)
T ss_pred CCCCCCCCeEEeCCCCccccchhHHHHHHHHHHhccCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEE
Confidence 21 35566653211 137889999997542 46888888754 34576532 699999999999999999
Q ss_pred eccccccccCcCCCCc--------cCCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCC
Q 001586 766 DGANMNAQVGLTSPGY--------IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQ 837 (1049)
Q Consensus 766 D~A~~~a~~gl~~Pg~--------~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~ 837 (1049)
|+++ .|+.+.|. ..+|++++ .|.++ .||-.+|++++++++..+.++. +
T Consensus 238 DEV~----tG~GrtG~~~~~~~~~v~PDi~t~--~K~l~----~~G~pigav~~~~~i~~~~~~~----------~---- 293 (425)
T PRK09264 238 DDIQ----AGCGRTGTFFSFERAGITPDIVTL--SKSIS----GYGLPMALVLIKPELDVWKPGE----------H---- 293 (425)
T ss_pred echh----hCCccccHHHHHhhcCCCCCEEEe--ccccC----CCccceEEEEEchhhhccCCCc----------c----
Confidence 9975 34444442 35688877 48763 3243468888887763221110 0
Q ss_pred CCCCCCccchhhHHHHHHHHHHH-HHHchhhHHHHHHHHHHHHHHHHHHHhcc---CC-eee--ccCCCceeeEEEEecc
Q 001586 838 PLGTIAAAPWGSALILPISYTYI-AMMGSKGLTEASKIAILNANYMAKRLEKH---YP-ILF--RGVNGTVAHEFIVDLR 910 (1049)
Q Consensus 838 ~t~~i~sa~~g~~~~~~~a~a~l-~~lG~eGl~~~~~~~~~~a~yL~~~L~~~---~~-v~~--~g~~g~~~~e~iv~~~ 910 (1049)
+. ++.|+++.++++.+.+ ..+..+++. ++..++.++|.++|+++ +. +.. .| .|. + +.+.+.
T Consensus 294 --~~---T~~gnp~~~aaa~a~l~~~~~~~~l~---~~~~~~g~~l~~~l~~l~~~~~~~~~~vrg-~Gl-~--~~i~l~ 361 (425)
T PRK09264 294 --NG---TFRGNNLAFVTATAALEEYWSDDAFE---KEVKAKGELVRERLEEIAAKYPGLGAEVRG-RGM-M--QGIDFG 361 (425)
T ss_pred --CC---CCCCCHHHHHHHHHHHHHHHhhhHHH---HHHHHHHHHHHHHHHHHHHhCCCceeccee-ccc-E--EEEEec
Confidence 00 1223444444555555 444443333 44456677888877653 32 111 11 122 2 233332
Q ss_pred CccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEccCCCCHHHHHHHHHHHHHHHHHHHHhhc
Q 001586 911 GLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIEN 977 (1049)
Q Consensus 911 ~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~eeid~fv~aL~~i~~~i~~i~~ 977 (1049)
. ......+.+.+.++|+.+..... ....||++|+..+|++|||++++.|.++++++.++++
T Consensus 362 ~-----~~~~~~l~~~~~~~Gv~~~~~~~-~~~~lr~~p~l~~t~~ei~~~~~~l~~~l~~~~~~~~ 422 (425)
T PRK09264 362 D-----GELAGKIAAEAFENGLIIETSGP-EDEVVKLLPPLTIDEEELEEGLDILEEAVAEVLAEEE 422 (425)
T ss_pred C-----hHHHHHHHHHHHHCCCEEeccCC-CCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHhccc
Confidence 1 12346788899999998753321 1378999999999999999999999999988766544
No 207
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.67 E-value=5.5e-16 Score=174.21 Aligned_cols=166 Identities=19% Similarity=0.198 Sum_probs=128.4
Q ss_pred HHHHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCEEEEEcCCCC
Q 001586 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK 712 (1049)
Q Consensus 633 ~i~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~Vv~V~~d~~ 712 (1049)
.+.++++.+++++|.+.+.+..+++++|..++++++. +++++||+++..|.++...+.+.|.+++.++++.+
T Consensus 60 ~i~~~~~~~A~~~ga~~~~~~~~Gst~a~~~~l~al~--------~~gd~Vlv~~~~h~s~~~~~~~~g~~~~~v~~~~~ 131 (294)
T cd00615 60 PIKEAQELAARAFGAKHTFFLVNGTSSSNKAVILAVC--------GPGDKILIDRNCHKSVINGLVLSGAVPVYLKPERN 131 (294)
T ss_pred HHHHHHHHHHHHhCCCCEEEEcCcHHHHHHHHHHHcC--------CCCCEEEEeCCchHHHHHHHHHCCCEEEEecCccC
Confidence 3779999999999998765557777777765555432 25789999999998877778889999999987533
Q ss_pred ------CCCCHHHHHHHHHhcCCCeEEEEEEcCCccccccccHHHHHHHHHHcCCEEEEeccccccc--cCc-C-CCCcc
Q 001586 713 ------GNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQ--VGL-T-SPGYI 782 (1049)
Q Consensus 713 ------g~iD~~~L~~~i~~~~~~taaV~it~Pn~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~--~gl-~-~Pg~~ 782 (1049)
+.+|+++++++++++ +++++|++++||++|.+. |+++|+++||++|++++||+|+...+ .+. . ....+
T Consensus 132 ~~~~~~~~i~~~~l~~~l~~~-~~~k~v~l~~p~~~G~~~-dl~~I~~~~~~~g~~livDeA~~~~~~~~~~~~~~~~~~ 209 (294)
T cd00615 132 PYYGIAGGIPPETFKKALIEH-PDAKAAVITNPTYYGICY-NLRKIVEEAHHRGLPVLVDEAHGAHFRFHPILPSSAAMA 209 (294)
T ss_pred cccCcCCCCCHHHHHHHHHhC-CCceEEEEECCCCCCEec-CHHHHHHHHHhcCCeEEEECcchhhhccCcccCcchhhc
Confidence 479999999999743 578999999999999998 79999999999999999999864221 111 1 11246
Q ss_pred CCcEEEeCCCcccccCCCCCCC-ceeEEEEccc
Q 001586 783 GADVCHLNLHKTFCIPHGGGGP-GMGPIGVKKH 814 (1049)
Q Consensus 783 GaDi~~~s~hK~f~~P~g~GGP-g~G~i~~~~~ 814 (1049)
|+|+++.|+||++ +|| +.|++.+++.
T Consensus 210 ~~div~~S~hK~l------~g~~~~~~l~~~~~ 236 (294)
T cd00615 210 GADIVVQSTHKTL------PALTQGSMIHVKGD 236 (294)
T ss_pred CCcEEEEchhccc------chHhHHHHHHhCCC
Confidence 8999999999987 354 4566666654
No 208
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.67 E-value=1.9e-14 Score=153.59 Aligned_cols=324 Identities=17% Similarity=0.165 Sum_probs=213.8
Q ss_pred ccCCCCCCCCCcHHHHHHHHhCCccccccCCChhhHhhhHHHHHHHHHHHHHHHhCCC-CcceEeccchHHHHHHHHHHh
Q 001586 170 FIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLP-MSNASLLDEGTAAAEAMAMCN 248 (1049)
Q Consensus 170 ~lG~g~y~~~~p~~i~~~~~~~~~~~t~ytpyq~e~sqg~le~l~e~q~~ia~L~G~~-~~n~sl~~~~Ta~~eA~~~a~ 248 (1049)
.+|.|.- -+|..|++ ..+++-- .-..||+-|=.-+.+.. +--.+... ..-..+-.+|+.++|+++..+
T Consensus 20 L~gPGPs--nl~~~V~~-A~~~~~l----gh~sPe~~qIm~~v~eg----ikyVFkT~n~~tf~isgsGh~g~E~al~N~ 88 (385)
T KOG2862|consen 20 LLGPGPS--NLSGRVQE-AMSRPSL----GHMSPEFVQIMDEVLEG----IKYVFKTANAQTFVISGSGHSGWEAALVNL 88 (385)
T ss_pred eecCCCc--CCCHHHHH-hhcCCcc----ccCCHHHHHHHHHHHHH----HHHHhccCCCceEEEecCCcchHHHHHHhh
Confidence 5677753 48888874 4444431 22356654433333333 33333322 223556678899999876543
Q ss_pred hhccCCCCEEEEcC-CCCHHHHHHHHHhhcCCCeEEEEeCc--------chhhc-cC-CCEeEEEEEcC-CCCeeecc-H
Q 001586 249 NIQKGKKKTFIIAS-NCHPQTIDICITRADGFDIKVVVSDL--------KDIDY-KS-GDVCGVLVQYP-GTEGEVLD-Y 315 (1049)
Q Consensus 249 ~~~~~~g~~Vlv~~-~~Hps~~~~l~~~a~~~gi~v~~v~~--------~~l~~-l~-~~t~~V~v~~p-n~~G~i~d-i 315 (1049)
.. +||+|++-. ..+.+...-+ +++.|++|..++. +++++ +. ...++|+|++. +.+|+++| +
T Consensus 89 -le--Pgd~vLv~~~G~wg~ra~D~---~~r~ga~V~~v~~~~G~~~~le~i~~~lsqh~p~~vfv~hgdsSTgV~q~~~ 162 (385)
T KOG2862|consen 89 -LE--PGDNVLVVSTGTWGQRAADC---ARRYGAEVDVVEADIGQAVPLEEITEKLSQHKPKAVFVTHGDSSTGVLQDLL 162 (385)
T ss_pred -cC--CCCeEEEEEechHHHHHHHH---HHhhCceeeEEecCcccCccHHHHHHHHHhcCCceEEEEecCccccccchHH
Confidence 23 899988544 6665543333 3457888877643 34444 43 35678888876 78999999 7
Q ss_pred HHHHHHHHhCCcEEEEEeccccccCCC-CCCcccceEEEecC-ccccccCCCCCCceEEEEEchhHHhcCCCceeeeeec
Q 001586 316 GDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSID 393 (1049)
Q Consensus 316 ~~I~~~ah~~galliV~a~~~alg~l~-~p~~~GaDivvgs~-k~lg~P~~~GGP~~G~l~~~~~l~~~lpgrivG~s~d 393 (1049)
+.+.++||+++++++|++ ..|+|... ...+||+|++...+ |.++.| ||++++..+++...++-.|--+
T Consensus 163 ~~~g~lc~k~~~lllVD~-VaSlggt~F~mDewgVDvaytgSQKaL~aP-----~GLsiisfS~ka~~~~~~rK~~---- 232 (385)
T KOG2862|consen 163 AISGELCHKHEALLLVDT-VASLGGTEFEMDEWGVDVAYTGSQKALGAP-----AGLSIISFSDKALEAIRDRKTK---- 232 (385)
T ss_pred HHHHHHhhcCCeEEEEec-hhhcCCccceehhhcccEEEecchhhcCCC-----CCcceeecCHHHHHHHhhccCC----
Confidence 888999999999999954 34776543 45799999988777 778877 4688898898888777443221
Q ss_pred CCCCcceeeecccccccc------cccccCCCccchhHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHhhcCCCe
Q 001586 394 SSGKPALRVAMQTREQHI------RRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTV 467 (1049)
Q Consensus 394 ~~g~~~~~l~lqtreq~i------rrekaTsni~t~~~l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~g~~ 467 (1049)
.-.|+++.-.+-+.+ |+...|..+ |.++++.+|+ +.+-++||+++.+|..+++++++..|+++| +
T Consensus 233 ---~~~~yFd~~~~~~~wgc~~e~~~yhhT~pv---~lly~Lr~AL--~~I~eeGL~~~~~rH~e~s~~l~~~l~~~G-L 303 (385)
T KOG2862|consen 233 ---PVSFYFDILRLGNFWGCDGEPRAYHHTPPV---QLLYSLRAAL--ALIAEEGLENSWRRHREMSKWLKLSLEALG-L 303 (385)
T ss_pred ---ceEEEEeHHhhcchhccCCcccccccCCcH---HHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-c
Confidence 112333322221211 445566666 8999999997 777899999999999999999999999998 8
Q ss_pred EEcC--C-CCcceE-EEecCC---HHHHHHHHHHc-CCee----eeecCCeEEEEecc-CCCHHHHHHHHHHHhC
Q 001586 468 EVQG--L-PFFDTV-KVKCAD---AHAIASAAYKI-EMNL----RVVDSNTVTASFDE-TTTLEDVDKLFIVFAG 529 (1049)
Q Consensus 468 ~v~~--~-~~~~~v-~i~~~~---~~~v~~~L~~~-gI~~----~~~~~~~vris~~~-~~t~edid~lv~aL~~ 529 (1049)
+... + ...+++ ++.++- ..+|+.++.++ ++.+ ....+..+||.+.- .-+.|-||+.+++|+.
T Consensus 304 q~fv~~e~~rlptvttv~vp~gvDw~dVv~~~~~~~~vei~gglg~~~gKv~RIGl~gcna~~e~i~~v~~ll~~ 378 (385)
T KOG2862|consen 304 QLFVVDEELRLPTVTTVKVPYGVDWKDVVAYAMSHYVVEIGGGLGPTVGKVFRIGLLGCNANVEYIDNVVELLKL 378 (385)
T ss_pred cceecChhhccCcceeeecCCCCCHHHHHHHHHHhcCEEeccccCCCcccEEEEEEeeccCCcHHHHHHHHHHHH
Confidence 8752 1 233332 233332 67888888876 5554 23345667887654 5677889998888864
No 209
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.67 E-value=3e-14 Score=168.76 Aligned_cols=297 Identities=18% Similarity=0.191 Sum_probs=184.7
Q ss_pred HHHHHHHHHHhhC-CCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEE-EcCCCCCccHHHHHhcC----------
Q 001586 634 FNNLGEWLCTITG-FDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCG---------- 701 (1049)
Q Consensus 634 i~el~~~la~l~G-~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VL-ip~saHg~~pa~a~~~G---------- 701 (1049)
..++.+.|+++++ .....++.+||+++++++++.+|.|. +|++|| +..+.||....+....+
T Consensus 88 ~~~la~~L~~~~~~~~~~v~f~~SGseA~e~AlklAr~~t------gr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~ 161 (433)
T PRK08117 88 ILKLAEELAEITPGGLDCFFFSNSGAEAIEGALKLAKHVT------KRPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQ 161 (433)
T ss_pred HHHHHHHHHHhCCCCCCEEEEeCcHHHHHHHHHHHHHHhc------CCCeEEEECCCcCCcCHHHHhhcCCCccccccCC
Confidence 4578899999983 22234677999999999999888762 244555 67889998766532211
Q ss_pred ---CEEEEEcCCCCCC------------CCHHHHHHHHHh--cCCCeEEEEEEcC-Cccccccc---cHHHHHHHHHHcC
Q 001586 702 ---MKIVSVGTDAKGN------------INIEELRKAAEA--NRDNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNG 760 (1049)
Q Consensus 702 ---~~Vv~V~~d~~g~------------iD~~~L~~~i~~--~~~~taaV~it~P-n~~G~i~~---di~eI~~lah~~G 760 (1049)
-.+..+|...... .|+++|++.+++ ..+++++|+++.. +..|.+.+ .+++|.++|++||
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g 241 (433)
T PRK08117 162 PLLGSVYQAPYPYCDRCPKGEDPEVCFLECLRDLESLFKHQVTPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHG 241 (433)
T ss_pred CCCCCcEEeCCCccccccccCchhHHHHHHHHHHHHHHHhccCCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcC
Confidence 1134454432111 267788888764 2357888887754 44677752 2999999999999
Q ss_pred CEEEEeccccccccCcCCCCc------cC--CcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCC
Q 001586 761 GQVYMDGANMNAQVGLTSPGY------IG--ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPA 832 (1049)
Q Consensus 761 ~ll~vD~A~~~a~~gl~~Pg~------~G--aDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~ 832 (1049)
+++++|+++. |+.+.|. +| +|++++ .|.++ + |-.+|+++.++++...+....
T Consensus 242 ~llI~DEv~t----G~gr~G~~~~~~~~gv~pDi~t~--sK~lg----~-G~pigav~~~~~i~~~~~~~~--------- 301 (433)
T PRK08117 242 ILLIFDEVQT----GFGRTGEWFAAQTFGVVPDIMTI--AKGIA----S-GLPLSAVVASKELMEQWPLGS--------- 301 (433)
T ss_pred CEEEEecchh----ccCccccchhHhhcCCCCCEeeh--hhhcc----C-CCcceeEEEcHHHHhhccCCC---------
Confidence 9999999853 4444432 22 577544 57763 3 344667777877665542110
Q ss_pred CCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc---CCee--eccCCCceeeEEEE
Q 001586 833 PEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIV 907 (1049)
Q Consensus 833 ~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~---~~v~--~~g~~g~~~~e~iv 907 (1049)
+ +. ++.|+++.++++.+.|..+..+++. ++...+.+++.++|+++ +.+. ..|. | .+..+-+
T Consensus 302 ~------~~---T~~~np~~~aaa~a~L~~l~~~~l~---~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~-G-l~~gi~~ 367 (433)
T PRK08117 302 H------GT---TFGGNPVACAAALATLEVIKEEKLL---DNANEMGAYALERLEVLKEKHPVIGDVRGI-G-LMIGIEI 367 (433)
T ss_pred C------CC---CCCcCHHHHHHHHHHHHHHHhccHH---HHHHHHHHHHHHHHHHHHhcCCceeeeecC-C-cEEEEEE
Confidence 0 01 1223556666677778777555544 34456678888888764 3322 1121 2 2212222
Q ss_pred eccCccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEccCCCCHHHHHHHHHHHHHHHHHH
Q 001586 908 DLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEI 972 (1049)
Q Consensus 908 ~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~eeid~fv~aL~~i~~~i 972 (1049)
..+. ..........+.+.|.++|+.+.... +..+.+|++|+..+|++|||+++++|.++++++
T Consensus 368 ~~~~-~~~~~~~~~~~~~~l~~~Gv~~~~~g-~~~~~lRl~p~~~~t~~~i~~~~~~l~~~l~~~ 430 (433)
T PRK08117 368 VDPD-GEPDGDAVEKILDKCLEKGLLFYLCG-NAGNVLRMIPPLTVTKEEIDEGLDILDEALTEY 430 (433)
T ss_pred ecCC-CCcchHHHHHHHHHHHHCCCEEeecC-CCCCEEEEeCCccCCHHHHHHHHHHHHHHHHHH
Confidence 1110 00001124567888899998764321 124799999999999999999999999988765
No 210
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.67 E-value=1.4e-14 Score=169.41 Aligned_cols=303 Identities=15% Similarity=0.122 Sum_probs=188.9
Q ss_pred hhcHHHHHHHHHHHHHHhhCCC---ccccccCchH-HHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCC
Q 001586 627 AQGYQEMFNNLGEWLCTITGFD---SFSLQPNAGA-AGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGM 702 (1049)
Q Consensus 627 ~~G~~~~i~el~~~la~l~G~~---~~~l~~~sGa-~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~ 702 (1049)
.+|..++...+++++++.+|.+ ...+..++|+ +|.. .+++.+. .++++|++++..+..+...++..|+
T Consensus 64 ~~G~~~lr~~~~~~l~~~~g~~~~~~~~i~~t~G~~~~l~---~~~~~~~-----~~gd~Vlv~~P~y~~~~~~~~~~g~ 135 (389)
T PRK05957 64 VQGIPPLLEAITQKLQQDNGIELNNEQAIVVTAGSNMAFM---NAILAIT-----DPGDEIILNTPYYFNHEMAITMAGC 135 (389)
T ss_pred CCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCChHHHHH---HHHHHhc-----CCCCEEEEeCCCCcCHHHHHHhcCC
Confidence 4677788888999999999974 3334445554 3443 2233221 2568899988777666666788999
Q ss_pred EEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-ccccccc--cHHHHHHHHHHcCCEEEEecccccc-ccC--c
Q 001586 703 KIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEE--GIDEICKIIHDNGGQVYMDGANMNA-QVG--L 776 (1049)
Q Consensus 703 ~Vv~V~~d~~g~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~~--di~eI~~lah~~G~ll~vD~A~~~a-~~g--l 776 (1049)
+++.++.+.++.+|+++|+++++ +++++|++++|+ .+|.+-+ ++++|+++|+++|+++++|+++..- ... .
T Consensus 136 ~~~~v~~~~~~~~d~~~l~~~i~---~~~klv~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~li~De~y~~~~~~~~~~ 212 (389)
T PRK05957 136 QPILVPTDDNYQLQPEAIEQAIT---PKTRAIVTISPNNPTGVVYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGVKH 212 (389)
T ss_pred EEEEeecCCCCCcCHHHHHHhcC---cCceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEeccchhccCCCCCc
Confidence 99999998778899999999996 689999999995 5998762 4999999999999999999985311 111 0
Q ss_pred CCC----CccCCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHH
Q 001586 777 TSP----GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALI 852 (1049)
Q Consensus 777 ~~P----g~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~ 852 (1049)
.++ ....--|++.++.|.|+.| |-++|++++++++.+.+.... .+...+++...+..
T Consensus 213 ~~~~~~~~~~~~~i~~~S~SK~~g~~----GlRiG~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~q~~- 273 (389)
T PRK05957 213 FSPGSIPGSGNHTISLYSLSKAYGFA----SWRIGYMVIPIHLLEAIKKIQ--------------DTILICPPVVSQYA- 273 (389)
T ss_pred cChhhCCCccCcEEEEecchhhccCc----cceeEEEecCHHHHHHHHHHH--------------hhcccCCCcHHHHH-
Confidence 011 1112236677788887433 566999999877665542110 00111111111211
Q ss_pred HHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhccCCe-eeccCCCceeeEEEEeccCccccCCCCHHHHHHHHH-HC
Q 001586 853 LPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPI-LFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-DY 930 (1049)
Q Consensus 853 ~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~~~v-~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~-~~ 930 (1049)
+..++. -+.+-+.+..+...++.+++.+.|+++-.+ .+..+.+.++ +.++++ .+++..+++++|. ++
T Consensus 274 ---~~~~l~-~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~gg~~--~~~~~~-----~~~~~~~~~~~l~~~~ 342 (389)
T PRK05957 274 ---ALGALQ-VGKSYCQQHLPEIAQVRQILLKSLGQLQDRCTLHPANGAFY--CFLKVN-----TDLNDFELVKQLIREY 342 (389)
T ss_pred ---HHHHHh-CChHHHHHHHHHHHHHHHHHHHHHHhcCCCccccCCCeeEE--EEEeCC-----CCCChHHHHHHHHHHC
Confidence 112221 122224445555667778888888764121 1111222121 335554 2467789999987 58
Q ss_pred CcccCC-CCCC--CCCEEEEEccCCCCHHHHHHHHHHHHHHHHH
Q 001586 931 GFHGPT-MSWP--VPGTLMIEPTESESKEELDRYCDALISIREE 971 (1049)
Q Consensus 931 Gi~~~~-~~~p--~~~~lri~~t~~~t~eeid~fv~aL~~i~~~ 971 (1049)
||.+.. -.|. ..+++|+++... +++++++.++.|.+.+++
T Consensus 343 gv~v~pg~~f~~~~~~~iRis~~~~-~~~~l~~~~~~l~~~~~~ 385 (389)
T PRK05957 343 RVAVIPGTTFGMKNGCYLRIAYGAL-QKATAKEGIERLVQGLKT 385 (389)
T ss_pred CEEEccchhhCCCCCCEEEEEEecC-CHHHHHHHHHHHHHHHHh
Confidence 998643 2232 246899998643 477777777777665544
No 211
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.67 E-value=2.6e-14 Score=169.96 Aligned_cols=309 Identities=14% Similarity=0.175 Sum_probs=199.4
Q ss_pred HHHHHHHHHHhhCCC-ccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEE-EcCCCCCccHHHHHhcC----------
Q 001586 634 FNNLGEWLCTITGFD-SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCG---------- 701 (1049)
Q Consensus 634 i~el~~~la~l~G~~-~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VL-ip~saHg~~pa~a~~~G---------- 701 (1049)
..++.+.|++++... ...++.+||+++++++++.+|.|...+|.++|.+|| +..+.||..-.+....|
T Consensus 101 ~~~lae~L~~~~p~~~~~v~f~~SGseAve~AlklAr~~~~~~g~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~ 180 (460)
T PRK06916 101 SILLAEKLIEVVPEGLKKVFYSDSGATAVEIAIKMAFQYWQNKGKPKKQRFVTLKNAYHGDTIGAVSVGAIDLFHQVYSS 180 (460)
T ss_pred HHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCcCCcccHHhHhccCCcccccccCC
Confidence 347888899987532 235788999999999999999887666655566776 67889997655443322
Q ss_pred --CEEEEEcCCCC-----C-------CCCHHHHHHHHHhcCCCeEEEEEEc-C-Cccccccc---cHHHHHHHHHHcCCE
Q 001586 702 --MKIVSVGTDAK-----G-------NINIEELRKAAEANRDNLSTLMVTY-P-STHGVYEE---GIDEICKIIHDNGGQ 762 (1049)
Q Consensus 702 --~~Vv~V~~d~~-----g-------~iD~~~L~~~i~~~~~~taaV~it~-P-n~~G~i~~---di~eI~~lah~~G~l 762 (1049)
..+..+|.... + ..|++++++.++.+.+++++|+++. . +..|++.+ .++++.++|+++|++
T Consensus 181 ~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~l 260 (460)
T PRK06916 181 LLFEAIKMPYPYTYRSPYGNDKAEIVKKHLEELEELLKEKHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNVL 260 (460)
T ss_pred CCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHcCCE
Confidence 12334443210 1 1246788888876678999999987 3 44676642 589999999999999
Q ss_pred EEEeccccccccCcCCCCcc--------CCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCC
Q 001586 763 VYMDGANMNAQVGLTSPGYI--------GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPE 834 (1049)
Q Consensus 763 l~vD~A~~~a~~gl~~Pg~~--------GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~ 834 (1049)
+++|++ +.|+.+.|.+ -+|++++ .|.+ ++|.-.+|.+.++++++..+.......
T Consensus 261 lI~DEV----~TG~GRtG~~~a~~~~gv~PDiv~~--gK~l----~gG~~Pi~av~~~~ei~~~~~~~~~~~-------- 322 (460)
T PRK06916 261 FITDEV----ATGFGRTGKMFACEHENVTPDIMTA--GKGL----TGGYLPIAITVTTDEIYNAFYGDYEEQ-------- 322 (460)
T ss_pred EEeech----hhCCCcCchhhHHHhcCCCCCeeee--ehhh----hcCccccceeeecHHHHHHhhcccccc--------
Confidence 999987 4566666643 3699877 4766 344224677777877665432110000
Q ss_pred CCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc--CCee--eccCCCceeeEEEEecc
Q 001586 835 KSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPIL--FRGVNGTVAHEFIVDLR 910 (1049)
Q Consensus 835 ~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~--~~v~--~~g~~g~~~~e~iv~~~ 910 (1049)
. .. ...+++.|+++.++++.+.|..+..+++. ++..++.++|.+.|+++ +.++ ..|. |. +..+-+.-+
T Consensus 323 ~--~~-~~~~T~~gnpl~~aaa~a~l~~l~~~~l~---~~~~~~g~~l~~~l~~l~~~~~v~~vrG~-Gl-m~giel~~~ 394 (460)
T PRK06916 323 K--TF-FHGHSYTGNPLGCAVALANLELYEKTNLI---EQVARKTEYVATQLEDLFALKHVGDIRQL-GL-MVGIELVKN 394 (460)
T ss_pred C--cc-ccCCCCCCCHHHHHHHHHHHHHHHhccHH---HHHHHHHHHHHHHHHHhhcCCCeEEeecC-Cc-eeeEEeecc
Confidence 0 00 00112345677788888888888777655 44557788898888875 2221 2222 32 222222111
Q ss_pred C-ccccCC--CC-HHHHHHHHHHCCcccCCCCCCCCCEEEEEccCCCCHHHHHHHHHHHHHHHHHH
Q 001586 911 G-LKNTAG--IE-PEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEI 972 (1049)
Q Consensus 911 ~-~~~~~g--~~-~~~v~k~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~eeid~fv~aL~~i~~~i 972 (1049)
. .+.... .. ...+.+.+.++|+.+... ++.+++.|+...|++|||.++++|.++++++
T Consensus 395 ~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~----g~~l~~~Ppl~it~~~id~~~~~l~~~l~~~ 456 (460)
T PRK06916 395 KETKEPFEWTERVGVQVCKRSRELGMLTRPL----GNTIVFMPPLASTIDELDEMLRILYKAISDV 456 (460)
T ss_pred cccccCCCchhhHHHHHHHHHHHCCeEEEec----CCEEEEeCCcccCHHHHHHHHHHHHHHHHhh
Confidence 0 000000 01 246888889999987532 4789999999999999999999999988764
No 212
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.67 E-value=2.5e-14 Score=170.18 Aligned_cols=306 Identities=16% Similarity=0.189 Sum_probs=196.0
Q ss_pred HHHHHHHHHHhhCC-------CccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEE-EcCCCCCccHHHHHhcCC---
Q 001586 634 FNNLGEWLCTITGF-------DSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGM--- 702 (1049)
Q Consensus 634 i~el~~~la~l~G~-------~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VL-ip~saHg~~pa~a~~~G~--- 702 (1049)
..++.+.|++++.- +. .++.+||+++++++++.+|.|...+|+++|.+|| ...++||..-.+....|.
T Consensus 109 ~~~lae~L~~~~p~~~~~~~~~~-v~f~~sGSEAvE~AlKlAr~~~~~~g~~~r~~ii~~~~syHG~t~gals~~~~~~~ 187 (472)
T PRK08742 109 AVQLAEQLLAIAPRQDGRAPLSK-VFYADNGSAGVEVALKMAFHYFHNRGEHRRTRFIALENGYHGETIGALAVGDIPLY 187 (472)
T ss_pred HHHHHHHHHHhCCCcccCCCCCE-EEEeCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCchhhhhccCCccc
Confidence 34778888888742 22 4788999999999999999987666655566777 678899987555433221
Q ss_pred ---------EEEEEcCCCC-----C-------CCCHHHHHHHHHhcCCCeEEEEEEc-C-Cccccccc---cHHHHHHHH
Q 001586 703 ---------KIVSVGTDAK-----G-------NINIEELRKAAEANRDNLSTLMVTY-P-STHGVYEE---GIDEICKII 756 (1049)
Q Consensus 703 ---------~Vv~V~~d~~-----g-------~iD~~~L~~~i~~~~~~taaV~it~-P-n~~G~i~~---di~eI~~la 756 (1049)
.+..+|.... + ..+++.+++.++++.+++++|+++. . +..|++.+ .++++.++|
T Consensus 188 ~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc 267 (472)
T PRK08742 188 RRVYAPLLLESLFAPSPDAYLAEPGQSAEDYALQAADALQALFEQSPGEICALILEPRLQCAGGMRMHHPAYLRRARELC 267 (472)
T ss_pred ccccCCCCCCCEEeCCCCccccccCCCHHHHHHHHHHHHHHHHHhCCCceEEEEEccccccCCCcccCCHHHHHHHHHHH
Confidence 2344444211 1 1146788888876667899999886 2 34576542 599999999
Q ss_pred HHcCCEEEEeccccccccCcCCCCcc--------CCcEEEeCCCcccccCCCCCC-CceeEEEEcccccccCCCCccccC
Q 001586 757 HDNGGQVYMDGANMNAQVGLTSPGYI--------GADVCHLNLHKTFCIPHGGGG-PGMGPIGVKKHLAPFLPSHPVVST 827 (1049)
Q Consensus 757 h~~G~ll~vD~A~~~a~~gl~~Pg~~--------GaDi~~~s~hK~f~~P~g~GG-Pg~G~i~~~~~l~~~lpg~~vg~t 827 (1049)
+++|+++|+|++ +.|+.+.|.+ -+|++++ .|.++ +|- | +|.++++++++..+.....
T Consensus 268 ~~~gillI~DEV----~TGfGRtG~~~a~e~~gv~PDiv~~--gKgl~----gG~~P-laav~~~~ei~~~~~~~~~--- 333 (472)
T PRK08742 268 DAHGAFLIADEI----ATGFGRTGTLFACEQAGVMPDLLCL--SKGLT----GGFLP-LSAVLATQQLYDAFLDDSR--- 333 (472)
T ss_pred HHcCCEEEEech----hhCCCCCccchHHHhcCCCCCEEEE--ccccc----CCCCC-cceeeccHHHHHHhhccCc---
Confidence 999999999986 5677676643 3699888 48763 332 5 5666677776654321100
Q ss_pred CCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc--CCee--eccCCCceee
Q 001586 828 GGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPIL--FRGVNGTVAH 903 (1049)
Q Consensus 828 ~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~--~~v~--~~g~~g~~~~ 903 (1049)
... ....+++.|+++.++++.+.|..+-++++.+.++ +..++|.+.++.. +.++ ..|. |. +.
T Consensus 334 --------~~~-~~h~~T~~gnpl~~Aaa~a~L~~i~~~~l~~~~~---~~g~~l~~~~~~~~~~~~i~dvRG~-Gl-~~ 399 (472)
T PRK08742 334 --------ERA-FLHSHSYTGNPLACAAALATLDIFADDDVIARNQ---PTAARMTQLAAQIGEHPHVADVRQA-GM-VV 399 (472)
T ss_pred --------cCc-cCcCCCCCccHHHHHHHHHHHHHHHHCCHHHHHH---HHHHHHHHHHHHHhcCCCeeeEecc-ce-EE
Confidence 000 0111224467788888899999988877655443 4455666555432 2322 1221 32 22
Q ss_pred EEEEeccCccccC-CCC---HHHHHHHHHHCCcccCCCCCCCCCEEEEEccCCCCHHHHHHHHHHHHHHHHHH
Q 001586 904 EFIVDLRGLKNTA-GIE---PEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEI 972 (1049)
Q Consensus 904 e~iv~~~~~~~~~-g~~---~~~v~k~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~eeid~fv~aL~~i~~~i 972 (1049)
.+.+..+.-.++. ..+ ...+.+++.++|+.+... ++++|+.|....|++|||.++++|.++++++
T Consensus 400 giel~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~----g~vi~~~PpL~it~~ei~~~~~~l~~~l~~~ 468 (472)
T PRK08742 400 AFELTRGGNKRTPFPPAARVGLHAYRAALARGVVLRPL----GDVLYWMPPYCVDEAQLALLADTTRHAIDEA 468 (472)
T ss_pred EEEeccCccccccCCchhHHHHHHHHHHHHCCeEEEec----CCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 2222111000000 001 246778888999987532 4899999999999999999999999988764
No 213
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.67 E-value=3.3e-14 Score=166.61 Aligned_cols=291 Identities=16% Similarity=0.198 Sum_probs=188.8
Q ss_pred HHHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCC-CCCCEEE-EcCCCCCccHHHHHhcCC---------
Q 001586 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGD-HHRNVCI-IPVSAHGTNPATAAMCGM--------- 702 (1049)
Q Consensus 634 i~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~-~~r~~VL-ip~saHg~~pa~a~~~G~--------- 702 (1049)
..++.++|+++++.....++.+||+++++++++.+|.|...+|. ++|.+|| ...+.||....+....|-
T Consensus 84 ~~~la~~L~~~~~~~~~v~f~~sGseA~e~AlklAr~~~~~~g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~ 163 (408)
T PRK04612 84 PLKLAEELVTASRFAEKVFLCNSGTEANEAAIKLVRKWASSQGRPADKRVIVTFRGSFHGRTLAAVTATAQPKYQEGYEP 163 (408)
T ss_pred HHHHHHHHHhhCCCCCEEEEcCchHHHHHHHHHHHHHHHHhhCCCCCCcEEEEECCCcCCccHHHHHhcCCcccccCCCC
Confidence 34778888888754333578899999999999999998765553 2355666 678899987665433221
Q ss_pred ---EEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-ccccccc---cHHHHHHHHHHcCCEEEEeccccccccC
Q 001586 703 ---KIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVG 775 (1049)
Q Consensus 703 ---~Vv~V~~d~~g~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~~---di~eI~~lah~~G~ll~vD~A~~~a~~g 775 (1049)
.++.+++ .|++++++.++ .+++++|+++..+ +.|++.+ .+++|.++|+++|+++++|+++ .|
T Consensus 164 ~~~~~~~~~~-----~d~~~l~~~~~--~~~~aavi~eP~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~----tg 232 (408)
T PRK04612 164 LPGGFRYVDF-----NDVEALEAAMA--GGDVAAVMLEPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQ----CG 232 (408)
T ss_pred CCCCceEcCC-----CCHHHHHHhhC--CCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccc----cC
Confidence 1223333 37899999885 2566666665433 3456553 4999999999999999999975 34
Q ss_pred cCCCCcc--------CCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccch
Q 001586 776 LTSPGYI--------GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPW 847 (1049)
Q Consensus 776 l~~Pg~~--------GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~ 847 (1049)
+.+.|.+ -+|+.++ .|.++ ||-.+|++.+++++.+.+.... + .+. +.
T Consensus 233 ~gr~G~~~a~~~~~~~pdi~t~--~K~l~-----~G~piga~~~~~~~~~~~~~~~---------~-----~~t----~~ 287 (408)
T PRK04612 233 MGRTGTLFAHWQEQVTPDIVTL--AKALG-----GGFPIGAMLAGPKVAETMQFGA---------H-----GTT----FG 287 (408)
T ss_pred CCcCCchhhhhhcCCCCCEEEE--cchhc-----CCCceEEEEECHHHHhhhcCCC---------c-----CCC----CC
Confidence 4444421 3477666 58773 4455778887777655442110 0 011 12
Q ss_pred hhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc---CCee--eccCCCceeeEEEEeccCccccCCCCHHH
Q 001586 848 GSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRGLKNTAGIEPED 922 (1049)
Q Consensus 848 g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~---~~v~--~~g~~g~~~~e~iv~~~~~~~~~g~~~~~ 922 (1049)
|++..++++.+.|..+.++++ .++...+.++|.++|+++ +.+. ..|. | .+..+.+..+ ......+
T Consensus 288 ~~p~~~aaa~a~L~~~~~~~l---~~~~~~~g~~l~~~l~~l~~~~~~i~~vrg~-G-l~~~i~~~~~-----~~~~a~~ 357 (408)
T PRK04612 288 GNPLAAAVARVALRKLASPQI---AANVARQSAALRAGLEALNAEFGVFAQVRGR-G-LMLGAVLAPA-----HAGQAGA 357 (408)
T ss_pred CCHHHHHHHHHHHHHHHhccH---HHHHHHHHHHHHHHHHHHHhhCCCeeeeecc-c-eEEEEEecCc-----hhhHHHH
Confidence 355666677777887766554 345556778888888774 3332 1221 2 2222222110 0113567
Q ss_pred HHHHHHHCCcccCCCCCCCCCEEEEEccCCCCHHHHHHHHHHHHHHHHHHH
Q 001586 923 VAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIA 973 (1049)
Q Consensus 923 v~k~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~eeid~fv~aL~~i~~~i~ 973 (1049)
+.+.|.++|+.+.... .+.+|+.|+...|++|||+++++|.+++.++.
T Consensus 358 i~~~l~~~Gvlv~~~g---~~~lRl~Ppl~it~eeid~~l~~l~~~l~~~~ 405 (408)
T PRK04612 358 ILDLAAEHGLLLLQAG---PDVLRFVPALNLTDAELADGLARLRLALADYV 405 (408)
T ss_pred HHHHHHHCCeEEeeCC---CCEEEEcCCccCCHHHHHHHHHHHHHHHHHHh
Confidence 8899999999874322 37999999999999999999999999887643
No 214
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.67 E-value=3e-14 Score=169.40 Aligned_cols=308 Identities=14% Similarity=0.144 Sum_probs=200.0
Q ss_pred HHHHHHHHHHhhC--CCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEE-EcCCCCCccHHHHHhcCC--------
Q 001586 634 FNNLGEWLCTITG--FDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGM-------- 702 (1049)
Q Consensus 634 i~el~~~la~l~G--~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VL-ip~saHg~~pa~a~~~G~-------- 702 (1049)
..++.+.|++++. ++. .++.+||+++++++++.+|.|...+|.++|.+|| ...+.||....+....|-
T Consensus 92 ~~~lae~L~~~~p~~~~~-v~f~~sGsEAve~AlKlAr~~~~~~g~t~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~ 170 (466)
T PRK07030 92 VIELSERLVKITPPGLSR-CFYADNGSSAIEVALKMSFHYWRNRGKPRKKRFVTLTNSYHGETLAAMSVGDVALFTETYK 170 (466)
T ss_pred HHHHHHHHHHhCCCCcCE-EEEeCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCcccHHHHhccCCccccccCC
Confidence 4578888988874 333 4778999999999999999887666755566776 678899976554432221
Q ss_pred ----EEEEEcCCCC-----C-------CCCHHHHHHHHHhcCCCeEEEEEEc-C-Cccccccc---cHHHHHHHHHHcCC
Q 001586 703 ----KIVSVGTDAK-----G-------NINIEELRKAAEANRDNLSTLMVTY-P-STHGVYEE---GIDEICKIIHDNGG 761 (1049)
Q Consensus 703 ----~Vv~V~~d~~-----g-------~iD~~~L~~~i~~~~~~taaV~it~-P-n~~G~i~~---di~eI~~lah~~G~ 761 (1049)
.+..+|.... + .-+++++++.++++.+++++|+++. . ...|++.+ .+++|.++|+++|+
T Consensus 171 p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~l~~le~~~~~~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~ 250 (466)
T PRK07030 171 PLLLDTIKVPSPDCYLRPEGMSWEEHSRRMFAHMEQTLAEHHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGV 250 (466)
T ss_pred ccCCCCEEcCCCCccccccCCCHHHHHHHHHHHHHHHHHhCCCceEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCC
Confidence 2344443221 1 1136778888887778999999986 3 34576642 58999999999999
Q ss_pred EEEEeccccccccCcCCCCcc--------CCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCC
Q 001586 762 QVYMDGANMNAQVGLTSPGYI--------GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAP 833 (1049)
Q Consensus 762 ll~vD~A~~~a~~gl~~Pg~~--------GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~ 833 (1049)
++|+|++ +.|+.+.|.+ -+|++++ .|.++ +|--.+|.++++++++..+.....
T Consensus 251 llI~DEV----~TGfGRtG~~~a~~~~gv~PDiv~~--gKgl~----gG~~Pi~av~~~~ei~~~~~~~~~--------- 311 (466)
T PRK07030 251 HLIHDEI----AVGFGRTGTMFACEQAGIRPDFLCL--SKALT----GGYLPLAAVLTTDTVYQAFYDDYP--------- 311 (466)
T ss_pred EEEEeeh----hhCcCccccchHHHhcCCCCCEEee--ehhcc----CCcccceEEEecHHHHHHHhcccc---------
Confidence 9999986 5677666643 3699888 48763 332236667778776654311000
Q ss_pred CCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc--CCee--eccCCCceeeEEEEec
Q 001586 834 EKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPIL--FRGVNGTVAHEFIVDL 909 (1049)
Q Consensus 834 ~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~--~~v~--~~g~~g~~~~e~iv~~ 909 (1049)
..... ...+++.|+++.++++.+.|..+-++++. ++..++.++|.++|+++ +..+ ..|. |. +..+-+..
T Consensus 312 -~~~~~-~h~~T~~gnpla~aaa~a~L~~i~~~~l~---~~~~~~G~~l~~~L~~l~~~~~v~~vrG~-Gl-~~gie~~~ 384 (466)
T PRK07030 312 -TLRAF-LHSHSYTGNPLACAAALATLDIFEQDNVI---ENNRALARRMAEATAHLADHPHVAEVRQT-GM-ILAIEMVQ 384 (466)
T ss_pred -ccccc-ccCCCCCCCHHHHHHHHHHHHHHHhcCHH---HHHHHHHHHHHHHHHHHhcCCCEEEeEec-ee-EEEEEecc
Confidence 00000 01122446778888889999998777655 44556788888888765 2221 1221 32 21221211
Q ss_pred cCccc-cC--CC-CHHHHHHHHHHCCcccCCCCCCCCCEEEEEccCCCCHHHHHHHHHHHHHHHHHH
Q 001586 910 RGLKN-TA--GI-EPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEI 972 (1049)
Q Consensus 910 ~~~~~-~~--g~-~~~~v~k~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~eeid~fv~aL~~i~~~i 972 (1049)
++..+ .. .. ....+.+++.++|+.+... .+.+++.|+...|++|||.++++|.++++++
T Consensus 385 ~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~----g~~i~~~Ppl~it~~eid~~~~~l~~al~~~ 447 (466)
T PRK07030 385 DKASKTPYPWQERRGLKVYQHALERGALLRPL----GSVVYFLPPYVITPEQIDFLAEVASEGIDIA 447 (466)
T ss_pred CccccccCcchhHHHHHHHHHHHHCCeEEEec----CCEEEEECCccCCHHHHHHHHHHHHHHHHHH
Confidence 11000 00 00 1246778888999987532 4789999999999999999999999998876
No 215
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=99.67 E-value=2e-14 Score=169.22 Aligned_cols=297 Identities=14% Similarity=0.197 Sum_probs=191.7
Q ss_pred HHHHHHHHHHhhCCCc-cccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEE-EcCCCCCccHHHHHhcC----------
Q 001586 634 FNNLGEWLCTITGFDS-FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCG---------- 701 (1049)
Q Consensus 634 i~el~~~la~l~G~~~-~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VL-ip~saHg~~pa~a~~~G---------- 701 (1049)
..++.++|+++++.+. ..++.+||+++++++++.+|.|...+|. +|.+|| ...+.||..-.+....|
T Consensus 88 ~~~la~~L~~~~p~~~~~v~f~~SGsEAve~AlklAr~~~~~~g~-~r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~ 166 (428)
T PRK07986 88 AIELCRKLVAMTPQPLECVFLADSGSVAVEVAMKMALQYWQAKGE-PRQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYK 166 (428)
T ss_pred HHHHHHHHHhhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCC-CCcEEEEECCCcCCCcHhhhcccCCchhhhhccC
Confidence 4477888888885322 2477899999999999999998765553 456666 67889996544332211
Q ss_pred ---CEEEEEcCCCC------CCCCHHHHHHHHHhcCCCeEEEEEEcC-Cc-ccccc---ccHHHHHHHHHHcCCEEEEec
Q 001586 702 ---MKIVSVGTDAK------GNINIEELRKAAEANRDNLSTLMVTYP-ST-HGVYE---EGIDEICKIIHDNGGQVYMDG 767 (1049)
Q Consensus 702 ---~~Vv~V~~d~~------g~iD~~~L~~~i~~~~~~taaV~it~P-n~-~G~i~---~di~eI~~lah~~G~ll~vD~ 767 (1049)
-.++.++.... ...|+++++++++++.+++++|+++.. .. .|++. ..+++|.++|+++|+++++|+
T Consensus 167 ~~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~l~~~~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DE 246 (428)
T PRK07986 167 GYLPENLFAPAPQSRFDGEWDERDIAPFARLMAAHRHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADE 246 (428)
T ss_pred CCCCCCEEECCCCcccchhhHHHHHHHHHHHHHhCCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEec
Confidence 11233433111 124678899989766678999988763 43 45543 249999999999999999999
Q ss_pred cccccccCcCCCCcc--------CCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCC
Q 001586 768 ANMNAQVGLTSPGYI--------GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPL 839 (1049)
Q Consensus 768 A~~~a~~gl~~Pg~~--------GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t 839 (1049)
++ .|+.+.|.+ -+|++++ .|.+ ++|---+|.+++++++.+.+.....+. .
T Consensus 247 v~----tG~GrtG~~fa~~~~gv~PDi~t~--gK~l----~gG~~p~~av~~~~~i~~~~~~~~~~~------------~ 304 (428)
T PRK07986 247 IA----TGFGRTGKLFACEHAGIAPDILCL--GKAL----TGGTMTLSATLTTREVAETISNGEAGC------------F 304 (428)
T ss_pred cc----cCCccCCCeeeecccCCCCCEEEe--chhh----hCCcccCcchhchHHHHHHhhcCCCCc------------c
Confidence 75 445455432 3688875 5766 333223455566766665543211000 0
Q ss_pred CCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc--CCee--eccCCCceeeEEEEeccCcccc
Q 001586 840 GTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPIL--FRGVNGTVAHEFIVDLRGLKNT 915 (1049)
Q Consensus 840 ~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~--~~v~--~~g~~g~~~~e~iv~~~~~~~~ 915 (1049)
...+++.|+++.++++.+.|..+.++++. ++..++.++|.++|+++ +..+ +.|. | .+.. +.+..
T Consensus 305 -~~~~T~~g~p~~~aaa~a~L~~i~~~~~~---~~~~~~g~~l~~~l~~l~~~~~i~~vRg~-G-l~~~--ve~~~---- 372 (428)
T PRK07986 305 -MHGPTFMGNPLACAVANASLSLLESGDWQ---QQVAAIEAQLREELAPLRDAPMVADVRVL-G-AIGV--VETTR---- 372 (428)
T ss_pred -ccCCCCCcCHHHHHHHHHHHHHHHhCCHH---HHHHHHHHHHHHHHHHHhcCCCEEeEecc-c-eEEE--EEeCC----
Confidence 00112335677788888888888766553 45556778888888764 2221 1121 2 2222 22221
Q ss_pred CCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEccCCCCHHHHHHHHHHHHHHHH
Q 001586 916 AGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIRE 970 (1049)
Q Consensus 916 ~g~~~~~v~k~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~eeid~fv~aL~~i~~ 970 (1049)
......+.+.|.++|+.+... ++.++++|+...|++|||+++++|.++++
T Consensus 373 -~~~~~~~~~~l~~~Gl~~~~~----g~~i~~~Ppl~it~~ei~~~~~~l~~~l~ 422 (428)
T PRK07986 373 -PVNMAALQRFFVEQGVWIRPF----GKLIYLMPPYIILPEQLQRLTAAVNRAVQ 422 (428)
T ss_pred -cccHHHHHHHHHHCCcEEEec----CCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Confidence 123567889999999987532 47899999999999999999999998864
No 216
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.67 E-value=1e-14 Score=170.45 Aligned_cols=297 Identities=15% Similarity=0.176 Sum_probs=186.4
Q ss_pred cHHHHHHHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHH----HHH--hcCCCCCCEEEEcCCCCCccHHHHHhc--
Q 001586 629 GYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRA----YHK--ARGDHHRNVCIIPVSAHGTNPATAAMC-- 700 (1049)
Q Consensus 629 G~~~~i~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~----y~~--~~G~~~r~~VLip~saHg~~pa~a~~~-- 700 (1049)
|+.....++|+.|++++|.+.+ +..++|-.++.+++-++-. ... ....++++.|+.....|.+--..+++.
T Consensus 144 G~~~~h~~LE~~LA~f~g~e~a-ll~sSGy~AN~~~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~ls~~ 222 (476)
T PLN02955 144 GYTTYHRLLESSLADLKKKEDC-LVCPTGFAANMAAMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGVRLAER 222 (476)
T ss_pred cChHHHHHHHHHHHHHHCCCcE-EEECChHHHHHHHHHHHhhccccccccccccCCCCcEEEEeccchHHHHHHHHhccc
Confidence 4445566899999999999875 5566777777665554410 000 001123456666666665544445554
Q ss_pred --CCEEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CccccccccHHHHHHHHHHcCCEEEEeccccccccCcC
Q 001586 701 --GMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT 777 (1049)
Q Consensus 701 --G~~Vv~V~~d~~g~iD~~~L~~~i~~~~~~taaV~it~P-n~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~ 777 (1049)
+.+++.++. .|+++|+++++++.++.+.|++... +..|.+- |+++|.++|++||++|+||.|+..+..|-.
T Consensus 223 ~~~a~~~~f~H-----ND~~~Le~~L~~~~~~~~~Vv~EgV~SmdGdia-pL~eL~~L~~~~ga~LiVDEAH~~Gv~G~~ 296 (476)
T PLN02955 223 QGNVEVFVYRH-----CDMYHLNSLLSSCKMKRKVVVTDSLFSMDGDFA-PMEELSQLRKKYGFLLVIDDAHGTFVCGEN 296 (476)
T ss_pred cCCceEEEeCC-----CCHHHHHHHHHhCCCCceEEEEeCCCCCCCCcC-CHHHHHHHHHHcCcEEEEcccccCceecCC
Confidence 578877776 6999999999877666666665543 5689887 799999999999999999999864332221
Q ss_pred CCC---cc----CCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhH
Q 001586 778 SPG---YI----GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSA 850 (1049)
Q Consensus 778 ~Pg---~~----GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~ 850 (1049)
--| .+ ..||++.++.|.|+. ..|++++++++++++... ++..-.+. +. .+
T Consensus 297 G~G~~e~~g~~~di~ii~~TLsKA~G~-------~GGfi~gs~~~~~~l~~~-----------~~~~ifSt-al----pp 353 (476)
T PLN02955 297 GGGVAEEFNCEADVDLCVGTLSKAAGC-------HGGFIACSKKWKQLIQSR-----------GRSFIFST-AI----PV 353 (476)
T ss_pred CCcHHHHhCCCCCCcEEEEeCccchhc-------cCceeecHHHHHHHHHHh-----------CCCCeecc-cc----cH
Confidence 011 12 458899999998742 247888887666554211 01000011 11 11
Q ss_pred HHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHHHC
Q 001586 851 LILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDY 930 (1049)
Q Consensus 851 ~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~ 930 (1049)
..++++.+.+..+-.+ ....++..++.+|+.+.+ .+.+ . .|.. .+++.. ...+..++++|.++
T Consensus 354 ~~aaa~laal~l~~~~--~~~r~~L~~n~~~fr~~~--G~~~--~---sPI~-pI~ig~-------~~~a~~~~~~L~~~ 416 (476)
T PLN02955 354 PMAAAAYAAVVVARKE--KWRRKAIWERVKEFKALS--GVDI--S---SPII-SLVVGN-------QEKALKASRYLLKS 416 (476)
T ss_pred HHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHhc--CCCC--C---CCEE-EEEeCC-------HHHHHHHHHHHHHC
Confidence 2222333334443222 234456667888888742 2222 1 1221 122221 12456789999999
Q ss_pred CcccCCCCCC-CC---CEEEEEccCCCCHHHHHHHHHHHHHHHHHH
Q 001586 931 GFHGPTMSWP-VP---GTLMIEPTESESKEELDRYCDALISIREEI 972 (1049)
Q Consensus 931 Gi~~~~~~~p-~~---~~lri~~t~~~t~eeid~fv~aL~~i~~~i 972 (1049)
||++....+| ++ ..+||+++..+|++|||+++++|.++....
T Consensus 417 Gi~v~~i~yPtVP~g~~rLRi~lsA~Ht~edId~lv~~L~~~~~~~ 462 (476)
T PLN02955 417 GFHVMAIRPPTVPPNSCRLRVTLSAAHTTEDVKKLITALSSCLDFD 462 (476)
T ss_pred CCEEEEECCCCCCCCCceEEEeeCCCCCHHHHHHHHHHHHHHHhhh
Confidence 9999877776 32 469999999999999999999999886553
No 217
>PRK06105 aminotransferase; Provisional
Probab=99.67 E-value=3.5e-14 Score=168.82 Aligned_cols=310 Identities=16% Similarity=0.195 Sum_probs=195.0
Q ss_pred HHHHHHHHHHhhCCCc-cccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEE-EcCCCCCccHHHHHhcC----------
Q 001586 634 FNNLGEWLCTITGFDS-FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCG---------- 701 (1049)
Q Consensus 634 i~el~~~la~l~G~~~-~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VL-ip~saHg~~pa~a~~~G---------- 701 (1049)
..++.+.|+++++.+. -.++.+||+++++++++.+|.|...+|.++|.+|| +..++||....+....|
T Consensus 94 ~~~lae~L~~~~p~~~~~v~f~~SGseAve~AlKlar~~~~~~g~t~r~~il~~~~~yHG~t~~a~s~t~~~~~~~~~~~ 173 (460)
T PRK06105 94 VIDLAEKLVAMAPVPMSKVFFTNSGSEANDTVVKLVWYYNNALGRPEKKKIISRQRGYHGVTIASASLTGLPNNHRSFDL 173 (460)
T ss_pred HHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEecCccCCcchhheeccCCcccccccCC
Confidence 4578899999985432 24678999999999999999887666654566777 57889997655422211
Q ss_pred --CEEEEEcCCCC------C-------CCCHHHHHHHHHhc-CCCeEEEEEEcC-Cccccccc---cHHHHHHHHHHcCC
Q 001586 702 --MKIVSVGTDAK------G-------NINIEELRKAAEAN-RDNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGG 761 (1049)
Q Consensus 702 --~~Vv~V~~d~~------g-------~iD~~~L~~~i~~~-~~~taaV~it~P-n~~G~i~~---di~eI~~lah~~G~ 761 (1049)
..+..++.... + ..+++++++++.+. .+++++|+++.. +..|++.+ .++++.++|++||+
T Consensus 174 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~ 253 (460)
T PRK06105 174 PLDRILHTGCPHYYRFGLPGESEEAFATRLANELEALILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDI 253 (460)
T ss_pred CCCCCEEcCCCcccccccCCCChHHHHHHHHHHHHHHHHHcCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCC
Confidence 12333433210 0 01257788888533 367899988764 34576642 39999999999999
Q ss_pred EEEEeccccccccCcCCCCcc--------CCcEEEeCCCcccccCCCCCC-CceeEEEEcccccccCCCCccccCCCCCC
Q 001586 762 QVYMDGANMNAQVGLTSPGYI--------GADVCHLNLHKTFCIPHGGGG-PGMGPIGVKKHLAPFLPSHPVVSTGGIPA 832 (1049)
Q Consensus 762 ll~vD~A~~~a~~gl~~Pg~~--------GaDi~~~s~hK~f~~P~g~GG-Pg~G~i~~~~~l~~~lpg~~vg~t~~~~~ 832 (1049)
++++|++ +.|+.+.|.+ -+|++++ .|.+ ++|. | +|.+++++++...+.... ..
T Consensus 254 llI~DEv----~tG~GRtG~~f~~~~~~v~PDi~~~--gK~l----ggG~~P-~~av~~~~~i~~~~~~~~-~~------ 315 (460)
T PRK06105 254 LLVADEV----ICGFGRTGNMFGCETFGIKPDILVM--SKQL----SSSYQP-LSAVLMNEKVYDPIADES-GK------ 315 (460)
T ss_pred eEEEecc----ccCCCcCchhhhHHhcCCCCCeeee--eccc----ccCccc-ceEEEEcHHHHHHHhccc-cc------
Confidence 9999987 4556555532 3688877 4766 3443 5 455666776665442110 00
Q ss_pred CCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc--CCee--eccCCCceeeEEEEe
Q 001586 833 PEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPIL--FRGVNGTVAHEFIVD 908 (1049)
Q Consensus 833 ~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~--~~v~--~~g~~g~~~~e~iv~ 908 (1049)
.......+++.|+++.++++.+.|..+-++++. ++...+.++|.++|+++ +.++ ..|. |. +..+-+.
T Consensus 316 ----~~~~~h~~T~~gnpl~~aaa~a~L~~i~~~~l~---~~v~~~g~~l~~~L~~l~~~~~v~~vrG~-Gl-~~gie~~ 386 (460)
T PRK06105 316 ----IGTFGHGFTASGHPVAAAVALENLAIIEERDLV---GNAAERGARLQARLRALADHPLVGEVRGV-GL-IAAVELV 386 (460)
T ss_pred ----CcccccCCCCCCCHHHHHHHHHHHHHHHhccHH---HHHHHHHHHHHHHHHHhhcCCCeEEEEec-ce-EEEEEEe
Confidence 000001122446777888888889888776654 45557788888888775 3322 1221 32 2222221
Q ss_pred ccCccccC----CCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEccCCCCHHHHHHHHHHHHHHHHHHHH
Q 001586 909 LRGLKNTA----GIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQ 974 (1049)
Q Consensus 909 ~~~~~~~~----g~~~~~v~k~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~eeid~fv~aL~~i~~~i~~ 974 (1049)
.+...++. ...+..+.+.+.++|+.+... .+.++++|....|++|||+++++|.++++++..
T Consensus 387 ~~~~~~~~~~~~~~~a~~i~~~~~~~Gvl~~~~----g~~i~l~Ppl~it~~eid~~~~~l~~~l~~~~~ 452 (460)
T PRK06105 387 ADKATKTPFEPPGKVGARANAAAHEHGVISRAM----GDTLAFCPPLIITAAQVDEMVDRFGRALDDVAA 452 (460)
T ss_pred cCcccCCCCCchhHHHHHHHHHHHHCCeEEEec----CCEEEEECCCccCHHHHHHHHHHHHHHHHHHHH
Confidence 11000000 001346778888999987532 478999999999999999999999999887643
No 218
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.67 E-value=1.8e-14 Score=168.02 Aligned_cols=214 Identities=23% Similarity=0.246 Sum_probs=155.6
Q ss_pred HHHHHHHHHHhCCCCcceEeccchHHHHHHHHHHhhhccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCcchh--
Q 001586 214 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKDI-- 291 (1049)
Q Consensus 214 ~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a~~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~~~~l-- 291 (1049)
.++++.+|+++|.+. +.++.+|++++.++++++ .. +||+||++...|+.+...++..+...|++++++|.+++
T Consensus 62 ~~le~~lA~l~g~~~--av~~~sG~~Ai~~~l~al-~~--~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~~~~vd~~d~e~ 136 (391)
T TIGR01328 62 SNLEGRIAFLEGTEA--AVATSSGMGAIAATLLTI-LK--AGDHLISDECLYGCTFALLEHALTKFGIQVDFINMAIPEE 136 (391)
T ss_pred HHHHHHHHHHhCCCc--EEEECCHHHHHHHHHHHH-hC--CCCEEEEecCcchHHHHHHHHHHhcCCeEEEEECCCCHHH
Confidence 457789999999876 678888988777666554 23 88999999999998888887777789999999988654
Q ss_pred -hc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCCCC
Q 001586 292 -DY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGG 367 (1049)
Q Consensus 292 -~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~p~~~GaDivvgs~-k~lg~P~~~GG 367 (1049)
++ ++++|++|++++| |++|.+.|+++|+++||++|++++|+ +.++.+....|.++|+|++++|. |.|++| |+
T Consensus 137 l~~~i~~~tklV~le~p~Np~G~v~dl~~I~~la~~~gi~livD-~a~a~~~~~~~~~~g~Divv~S~sK~lgg~---g~ 212 (391)
T TIGR01328 137 VKAHIKDNTKIVYFETPANPTMKLIDMERVCRDAHSQGVKVIVD-NTFATPMLTNPVALGVDVVVHSATKYIGGH---GD 212 (391)
T ss_pred HHHhhccCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEE-CCCchhccCCchhcCCCEEEccccccccCC---CC
Confidence 44 6788999999998 78999999999999999999999994 45566666667789999999998 777543 33
Q ss_pred CceEEEEEchhHHhcCCCceeeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcchHHHHH
Q 001586 368 PHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIA 447 (1049)
Q Consensus 368 P~~G~l~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irrekaTsni~t~~~l~a~~aa~y~~~~g~~Gl~~ia 447 (1049)
+.+|+++.++++.+++- ..+ ++...+ + ..++. .|+ +...+.+-+....
T Consensus 213 ~~gG~v~~~~~li~~l~--~~~----------------------~~~~~g-~--~l~~~---~a~--l~l~~L~tl~~r~ 260 (391)
T TIGR01328 213 VVAGLICGKAELLQQIR--MVG----------------------IKDMTG-S--VISPF---DAW--LILRGLKTLNIRM 260 (391)
T ss_pred ceEEEEEcCHHHHHHHH--HHH----------------------HHhCCC-C--CCCcH---HHH--HHHhCcCcHHHHH
Confidence 44688888887765441 000 000000 0 00111 111 1233444556667
Q ss_pred HHHHHHHHHHHHHhhcCCCeE
Q 001586 448 QRVHGLAGTFALGLKKLGTVE 468 (1049)
Q Consensus 448 ~~~~~~a~~l~~~L~~~g~~~ 468 (1049)
++..+++.++++.|++..+++
T Consensus 261 ~~~~~na~~la~~L~~~p~v~ 281 (391)
T TIGR01328 261 KRHSENAMKVAEYLKSHPAVE 281 (391)
T ss_pred HHHHHHHHHHHHHHHhCCCcc
Confidence 778899999999999875454
No 219
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.66 E-value=6.3e-15 Score=170.29 Aligned_cols=301 Identities=12% Similarity=0.064 Sum_probs=184.4
Q ss_pred HHHHHHHHHHHHHhhCCCc---cccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHH-HHHh---cCCE
Q 001586 631 QEMFNNLGEWLCTITGFDS---FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA-TAAM---CGMK 703 (1049)
Q Consensus 631 ~~~i~el~~~la~l~G~~~---~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa-~a~~---~G~~ 703 (1049)
.+.+++.++.+++++|.+. +.|..++|+.+.++++..+ .. + +.+++....|+..-. .+.+ .+ +
T Consensus 40 ~~~~~~~r~~l~~l~~~~~~~~v~f~~gs~T~a~~~~~~~l---~~-----~-~~l~i~~G~~~~~~~~~a~~~~~~~-~ 109 (361)
T TIGR01366 40 KNLVGRVREGLAELFSLPDGYEVILGNGGATAFWDAATFGL---IE-----K-KSLHLSFGEFSSKFAKAVKLAPWLG-E 109 (361)
T ss_pred HHHHHHHHHHHHHHhCCCCCceEEEECCchhHHHHHHHHhc---cc-----c-cccEEecCHHHHHHHHHHHhhhccC-C
Confidence 3678899999999999843 2344677777776554433 11 1 223343434443222 2333 33 7
Q ss_pred EEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-ccccccccHHHHHHHHHHcCCEEEEeccccccccCcCCCCcc
Q 001586 704 IVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI 782 (1049)
Q Consensus 704 Vv~V~~d~~g~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~Pg~~ 782 (1049)
+..+++++...++. .++ +++++|.+++-+ .+|++. |+++| +|++|++++||+++..+...+. ..
T Consensus 110 ~~~~~~~~~~~~~~-----~~~---~~~~lV~~~h~et~tG~~~-pi~~I---~~~~g~~~iVDavqs~g~~~id-v~-- 174 (361)
T TIGR01366 110 PIIVTADPGSAPEP-----QAD---PGVDVIAWAHNETSTGVAV-PVRRP---EGSDDALVVIDATSGAGGLPVD-IA-- 174 (361)
T ss_pred ceEEecCCCCCCCC-----ccC---CCCCEEEEcccCCccceec-ccccc---cccCCCeEEEEcCccccCCCCC-HH--
Confidence 77777765444443 233 789999998875 599998 79887 5899999999998754443322 12
Q ss_pred CCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCcccc-----CCCC---CCCCCCCCCCCCCccchhhHHHHH
Q 001586 783 GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVS-----TGGI---PAPEKSQPLGTIAAAPWGSALILP 854 (1049)
Q Consensus 783 GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~-----t~~~---~~~~~~~~t~~i~sa~~g~~~~~~ 854 (1049)
.+|+++++.||+|+.| ||++++++++++.+.+.....+. ..+. .....+..+.++.+ . ..+.
T Consensus 175 ~~D~~~~s~~K~lg~~-----~Gl~~~~~s~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~~t~~tp~----i-~~i~ 244 (361)
T TIGR01366 175 ETDVYYFAPQKNFASD-----GGLWLAIMSPAALERIEAIAASGRWVPEFLSLPTAVDNSLKNQTYNTPA----I-ATLA 244 (361)
T ss_pred HCCEEEEEchhhcCCC-----CceEEEEECHHHHhhhhcccCCCCCCchhhhHHHHHhccccCCCCCCch----H-HHHH
Confidence 3899999999998532 46888888886654443211110 0000 00011122333332 1 1111
Q ss_pred HHHHHHHHHchh-hHHHHHHHHHHHHHHHHHHHhcc--CCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHHHCC
Q 001586 855 ISYTYIAMMGSK-GLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYG 931 (1049)
Q Consensus 855 ~a~a~l~~lG~e-Gl~~~~~~~~~~a~yL~~~L~~~--~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~G 931 (1049)
+..+.+..+..+ |+..+.++...+++++.++|++. +++...++........++.+. .+.+..++.+.|.++|
T Consensus 245 ~l~~al~~l~~~gg~e~~~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~v~~v~~~-----~g~~~~~v~~~L~~~g 319 (361)
T TIGR01366 245 LLAEQIDWMNGNGGLDWAVARTADSSSRLYSWAQERPYATPFVTDPGKRSQVVGTIDFV-----DDIDAATVAKILRANG 319 (361)
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhcccceEEEECC-----CccCHHHHHHHHHHCC
Confidence 223344444455 57777788889999999999886 333222211111111234442 3678899999999999
Q ss_pred cccCCCCCCC-CCEEEEEccCCCCHHHHHHHHHHHHHHHHH
Q 001586 932 FHGPTMSWPV-PGTLMIEPTESESKEELDRYCDALISIREE 971 (1049)
Q Consensus 932 i~~~~~~~p~-~~~lri~~t~~~t~eeid~fv~aL~~i~~~ 971 (1049)
|.+.....++ .+.+||+...++|.+|||+|+++|++++++
T Consensus 320 I~i~~~~~~l~~~~vRis~~~~~t~~di~~l~~al~~~~~~ 360 (361)
T TIGR01366 320 IVDTEPYRKLGRNQLRVAMFPAIDPDDVEALTECVDWVVER 360 (361)
T ss_pred CeeccCccccCCCcEEEEcCCCCCHHHHHHHHHHHHHHHhh
Confidence 9864221112 357999999999999999999999998654
No 220
>PLN02822 serine palmitoyltransferase
Probab=99.66 E-value=2.2e-14 Score=171.56 Aligned_cols=298 Identities=14% Similarity=0.149 Sum_probs=188.7
Q ss_pred cHHHHHHHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCEEEEEc
Q 001586 629 GYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVG 708 (1049)
Q Consensus 629 G~~~~i~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~Vv~V~ 708 (1049)
|..+...++++.|++++|.+...++. +|.++.++ +++++- ++++.|++...+|.+....+.+.|.+++.++
T Consensus 151 g~~~~~~~Lee~La~~~~~~~~i~~s-~G~~a~~s---ai~a~~-----~~gd~Ii~d~~~H~s~~~~~~ls~~~~~~~~ 221 (481)
T PLN02822 151 GTIDVHLDCETKIAKFLGTPDSILYS-YGLSTIFS---VIPAFC-----KKGDIIVADEGVHWGIQNGLYLSRSTIVYFK 221 (481)
T ss_pred cCHHHHHHHHHHHHHHhCCCCEEEEC-CHHHHHHH---HHHHhC-----CCCCEEEEeCCccHHHHHHHHHcCCeEEEEC
Confidence 45566779999999999987643444 44444444 444441 2578888888888776666778899999998
Q ss_pred CCCCCCCCHHHHHHHHHhcC------CCe-EEEEEEcC-CccccccccHHHHHHHHHHcCCEEEEeccccccccCcCCCC
Q 001586 709 TDAKGNINIEELRKAAEANR------DNL-STLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPG 780 (1049)
Q Consensus 709 ~d~~g~iD~~~L~~~i~~~~------~~t-aaV~it~P-n~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~Pg 780 (1049)
.+ |.++++..+++.. +++ ++|+++.+ +.+|.+. |+++|+++|++||+++++|+++... .+...|
T Consensus 222 ~n-----d~~~l~~~l~~~~~~~~~~~~~~~~Ivve~i~~~~G~i~-~L~~i~~l~~k~~~~LIvDEa~s~g--vlG~~G 293 (481)
T PLN02822 222 HN-----DMESLRNTLEKLTAENKRKKKLRRYIVVEAIYQNSGQIA-PLDEIVRLKEKYRFRVLLDESNSFG--VLGKSG 293 (481)
T ss_pred CC-----CHHHHHHHHHHHhhhhcccCCCcEEEEEecCCCCCCCcc-CHHHHHHHHHHcCCEEEEECCcccc--ccCCCC
Confidence 74 6777777665421 234 68877777 4589988 7999999999999999999997532 232222
Q ss_pred -----c-----cCCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhH
Q 001586 781 -----Y-----IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSA 850 (1049)
Q Consensus 781 -----~-----~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~ 850 (1049)
. ...|+++++++|+|++ +| |+++.++++++.+... + +. ...+++. .+
T Consensus 294 ~G~~e~~~v~~~~~dii~~s~sKalg~------~G-G~i~g~~~ii~~~~~~--~-------~~-----~~fsa~l--Pp 350 (481)
T PLN02822 294 RGLSEHFGVPIEKIDIITAAMGHALAT------EG-GFCTGSARVVDHQRLS--S-------SG-----YVFSASL--PP 350 (481)
T ss_pred CChHHHcCCCCCCCeEEEecchhhhhh------CC-eEEEcCHHHHHHHHhc--C-------Cc-----eeecccc--CH
Confidence 1 2468999999999852 22 7888887766543210 0 00 0011100 11
Q ss_pred HHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc--CCeeeccCCCceeeEEEEeccCccccCCCC---HHHHHH
Q 001586 851 LILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEFIVDLRGLKNTAGIE---PEDVAK 925 (1049)
Q Consensus 851 ~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~--~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~---~~~v~k 925 (1049)
..+.++.+.|..+.. ..+..++..++.+++.++|++. +.+..+ ..++. +.+.++........+ ..++++
T Consensus 351 ~~~~Aa~~aL~~l~~--~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~-~~spi---~~l~l~~~~~~~~~~~~~~~~~~~ 424 (481)
T PLN02822 351 YLASAAITAIDVLED--NPSVLAKLKENIALLHKGLSDIPGLSIGSN-TLSPI---VFLHLEKSTGSAKEDLSLLEHIAD 424 (481)
T ss_pred HHHHHHHHHHHHHHh--CHHHHHHHHHHHHHHHHHHHhcCCcccCCC-CCCCE---EEEEeCCCcccccchHHHHHHHHH
Confidence 222333345544422 2345567778899999999875 333211 11222 223332100000001 357899
Q ss_pred HHH-HCCcccCCCCCC------CCCEEEEEccCCCCHHHHHHHHHHHHHHHHHH
Q 001586 926 RLM-DYGFHGPTMSWP------VPGTLMIEPTESESKEELDRYCDALISIREEI 972 (1049)
Q Consensus 926 ~L~-~~Gi~~~~~~~p------~~~~lri~~t~~~t~eeid~fv~aL~~i~~~i 972 (1049)
+|. ++||.+....+| .+..+|++++..+|++||++++++|++++..+
T Consensus 425 ~Ll~e~GV~v~~~~~~~~~~~~~~~~lRi~is~~~t~edI~~~~~~l~~~~~~~ 478 (481)
T PLN02822 425 RMLKEDSVLVVVSKRSTLDKCRLPVGIRLFVSAGHTESDILKASESLKRVAASV 478 (481)
T ss_pred HHHhcCCEEEEeeCCCCcCCCCCCCcEEEEECCCCCHHHHHHHHHHHHHHHHHH
Confidence 987 789986432111 23579999999999999999999999887664
No 221
>PRK07483 hypothetical protein; Provisional
Probab=99.66 E-value=6.1e-14 Score=166.03 Aligned_cols=310 Identities=15% Similarity=0.158 Sum_probs=197.3
Q ss_pred HHHHHHHHHHhhC--CCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEE-EcCCCCCccHHHHHhcCC--------
Q 001586 634 FNNLGEWLCTITG--FDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGM-------- 702 (1049)
Q Consensus 634 i~el~~~la~l~G--~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VL-ip~saHg~~pa~a~~~G~-------- 702 (1049)
..++.+.|++++. ++. .++.+||+++++++++.+|.|...+|.++|.+|| ...++||....+..+.|-
T Consensus 75 ~~~lae~L~~~~p~~~~~-v~f~~sGsEAve~AlklAr~~~~~~g~~~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~~~ 153 (443)
T PRK07483 75 AEALADRLVAAAPAGLEH-VYFVSGGSEAVEAALKLARQYFVEIGQPQRRHFIARRQSYHGNTLGALAIGGNAWRREPFA 153 (443)
T ss_pred HHHHHHHHHHhCCCCCCE-EEEcCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcCHHHhhhcCCcccccccC
Confidence 3478888999874 343 4678999999999999999987666655567777 588999987655433221
Q ss_pred ----EEEEEcCCCCCC-C------------CHHHHHHHHHh-cCCCeEEEEEEcCC--ccccccc---cHHHHHHHHHHc
Q 001586 703 ----KIVSVGTDAKGN-I------------NIEELRKAAEA-NRDNLSTLMVTYPS--THGVYEE---GIDEICKIIHDN 759 (1049)
Q Consensus 703 ----~Vv~V~~d~~g~-i------------D~~~L~~~i~~-~~~~taaV~it~Pn--~~G~i~~---di~eI~~lah~~ 759 (1049)
.++.++.....+ . .+++|++++.+ +.+++++|+++... .-|++.+ .+++|.++|++|
T Consensus 154 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~ 233 (443)
T PRK07483 154 PLLIEAHHVSPCYAYREQRAGESDEAYGQRLADELEAKILELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRY 233 (443)
T ss_pred CCCCCCEEeCCCccccccccCCCHHHHHHHHHHHHHHHHHhcCCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHh
Confidence 123343211000 0 13677776643 34689999887653 2466653 499999999999
Q ss_pred CCEEEEeccccccccCcCCCCcc--------CCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCC
Q 001586 760 GGQVYMDGANMNAQVGLTSPGYI--------GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIP 831 (1049)
Q Consensus 760 G~ll~vD~A~~~a~~gl~~Pg~~--------GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~ 831 (1049)
|+++++|++ +.|+.+.|.+ -+|++++ .|.++ +|--.+|.+.+++++.+.+.... +
T Consensus 234 gillI~DEV----~tGfGRtG~~~a~~~~gv~PDiv~~--gK~l~----gG~~Pi~av~~~~~i~~~~~~~~-~------ 296 (443)
T PRK07483 234 GVLLILDEV----MCGMGRTGTLFACEEDGVAPDLVTI--AKGLG----AGYQPIGAVLASDRIYDAIADGS-G------ 296 (443)
T ss_pred CCEEEEecc----eeCcccCcHHHHHhhcCCCCCeeee--hhhhc----cCccccEEEEEcHHHHHHHhcCC-C------
Confidence 999999987 5677677643 3699887 48763 33213667777877765543110 0
Q ss_pred CCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc---CCee--eccCCCceeeEEE
Q 001586 832 APEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFI 906 (1049)
Q Consensus 832 ~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~---~~v~--~~g~~g~~~~e~i 906 (1049)
.. ...+++.|+++.++++.+.|..+-++++.+ +..+..++|.++|++. +.++ ..|. |. +..+-
T Consensus 297 ------~~-~h~~T~~gnpl~~aaa~a~l~~i~~~~l~~---~~~~~g~~l~~~L~~l~~~~~~i~~vRG~-Gl-m~gie 364 (443)
T PRK07483 297 ------FF-QHGHTYLGHATACAAALAVQRVIAEDGLLA---NVRARGEQLRARLRERLGQHPHVGDIRGR-GL-FVGVE 364 (443)
T ss_pred ------cc-ccCCCCCCCHHHHHHHHHHHHHHHhcCHHH---HHHHHHHHHHHHHHHHHhcCCCeeeEeec-cc-EEEEE
Confidence 00 011224467788888889998887776544 4446778888888753 3322 1231 32 22222
Q ss_pred EeccC-cccc--CC-CCHHHHHHHHHHCCcccCCCCC----CCCCEEEEEccCCCCHHHHHHHHHHHHHHHHHHH
Q 001586 907 VDLRG-LKNT--AG-IEPEDVAKRLMDYGFHGPTMSW----PVPGTLMIEPTESESKEELDRYCDALISIREEIA 973 (1049)
Q Consensus 907 v~~~~-~~~~--~g-~~~~~v~k~L~~~Gi~~~~~~~----p~~~~lri~~t~~~t~eeid~fv~aL~~i~~~i~ 973 (1049)
+..+. -+.. .. .....+.+++.++|+.+..... +.++++|+.|+...|++|||+++++|.+++.++.
T Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~~~~~~~~~~~~l~~~PpL~it~~eid~~~~~l~~~l~~~~ 439 (443)
T PRK07483 365 LVADRATKAPFDPALKLHARIKREAMARGLMVYPMGGTIDGVRGDHVLLAPPFIITAAQIDEIVERLGDAIDAAL 439 (443)
T ss_pred EeecccccCCCCchhhHHHHHHHHHHHCCcEEEecCccccCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 21110 0000 00 0135678888999998742210 1147899999999999999999999999987754
No 222
>PRK04311 selenocysteine synthase; Provisional
Probab=99.66 E-value=2.4e-14 Score=169.08 Aligned_cols=305 Identities=18% Similarity=0.175 Sum_probs=184.6
Q ss_pred CcHHHHHHHHhCCccccccCCChhhHhh-hHHHHHHHHHHHHHHHhCCCCcceEeccchHHHHHHHHHHhhhccCCCCEE
Q 001586 180 VPPVILRNIMENPAWYTQYTPYQAEIAQ-GRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTF 258 (1049)
Q Consensus 180 ~p~~i~~~~~~~~~~~t~ytpyq~e~sq-g~le~l~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a~~~~~~~g~~V 258 (1049)
+|+.+.+++.+ ++..|......... .+-+....+++.+|+|+|++. +.++++++++...++.++ . +|++|
T Consensus 98 l~~~v~eav~~---~~~~~~~le~~l~~g~~g~r~~~~e~~lA~l~Gae~--a~vv~sgtaAl~l~l~~l--~--~GdeV 168 (464)
T PRK04311 98 LSEAAIEAVTE---AARGYSNLEYDLATGKRGSRDRALAALLCALTGAED--ALVVNNNAAAVLLALNAL--A--AGKEV 168 (464)
T ss_pred CCHHHHHHHHH---HHhcccccccchhhcccchHHHHHHHHHHHHhCCCe--EEEECCHHHHHHHHHHHh--C--CCCEE
Confidence 66666656654 33344321111211 122446678899999999875 668888887765544332 2 88999
Q ss_pred EEcCCCCHHHHHH--HHHhhcCCCeEEEEeCc------chhhc-cCCCEeEEEEEcC-CC--Ce--eeccHHHHHHHHHh
Q 001586 259 IIASNCHPQTIDI--CITRADGFDIKVVVSDL------KDIDY-KSGDVCGVLVQYP-GT--EG--EVLDYGDFIKNAHA 324 (1049)
Q Consensus 259 lv~~~~Hps~~~~--l~~~a~~~gi~v~~v~~------~~l~~-l~~~t~~V~v~~p-n~--~G--~i~di~~I~~~ah~ 324 (1049)
|+++.+|.++-.. +....+..|+++++++. +++++ ++++|++|++.++ |+ +| .+.|+++|+++||+
T Consensus 169 Ivs~~e~~~~ggs~~i~~~~~~~G~~l~~v~~~~~t~~~dle~aI~~~TklV~~vh~sN~~i~G~~~~~dl~eI~~lak~ 248 (464)
T PRK04311 169 IVSRGELVEIGGAFRIPDVMRQAGARLVEVGTTNRTHLRDYEQAINENTALLLKVHTSNYRIEGFTKEVSLAELAALGKE 248 (464)
T ss_pred EEcchhhhhcCcchhhHHHHHHCCcEEEEECCCCCCCHHHHHHhcCccCeEEEEEcCCCccccccCCcCCHHHHHHHHHH
Confidence 9999888643110 11223567999998875 34566 8899999998876 54 34 56799999999999
Q ss_pred CCcEEEEEeccc------ccc-----CCCCCCcccceEEEecC-ccccccCCCCCCceEEEEEchhHHhcCCCceeeeee
Q 001586 325 NGVKVVMATDLL------ALT-----ILKPPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSI 392 (1049)
Q Consensus 325 ~galliV~a~~~------alg-----~l~~p~~~GaDivvgs~-k~lg~P~~~GGP~~G~l~~~~~l~~~lpgrivG~s~ 392 (1049)
+|++++|+.-.- .++ .+..+.++|||++++|+ |.| |||++|++++++++++++...-++
T Consensus 249 ~gi~vivD~gsG~l~~~~~~gl~~~p~~~~~l~~GaDiv~fSg~K~L------gGp~~G~i~g~~~li~~l~~~~~~--- 319 (464)
T PRK04311 249 HGLPVVYDLGSGSLVDLSQYGLPDEPTVQELLAAGVDLVTFSGDKLL------GGPQAGIIVGKKELIARLKKHPLK--- 319 (464)
T ss_pred cCCeEEEECCCcccccchhccCCCCCchhhHHhcCCcEEEecCcccc------cCCceEEEEEcHHHHHHHhhchhH---
Confidence 999999954110 111 11234568999999999 544 567889999999988776421111
Q ss_pred cCCCCcceeeecccccccccccccCCCccchhHHHHHHHHH--HH----HHhCcchHHHH---HHHHHHHHHHHHHHhhc
Q 001586 393 DSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAM--YA----VYHGPEGLKTI---AQRVHGLAGTFALGLKK 463 (1049)
Q Consensus 393 d~~g~~~~~l~lqtreq~irrekaTsni~t~~~l~a~~aa~--y~----~~~g~~Gl~~i---a~~~~~~a~~l~~~L~~ 463 (1049)
+.+ |-.|. .+.++.+++ |+ ++.+-.+++.+ .++..++|..+++.|++
T Consensus 320 -----r~l-----------r~dk~--------~l~~l~~~l~~~~~~~~~~~~i~~l~~l~~~~~~~~~~A~~la~~L~~ 375 (464)
T PRK04311 320 -----RAL-----------RVDKL--------TLAALEATLRLYLDPEKLAEEIPTLRLLTRSPEELRARAERLAAALKA 375 (464)
T ss_pred -----HHH-----------hcchH--------HHHHHHHHHHHHhChhhhhhhCcHHHHhcCCHHHHHHHHHHHHHHHHh
Confidence 000 11121 222333333 21 12333333222 34556678888888876
Q ss_pred CC--Ce--EEcCC---------C--CcceEEEec--CC--HHHHHHHHHHcCC--eeeeecCCeEEEEeccCCCHHHHHH
Q 001586 464 LG--TV--EVQGL---------P--FFDTVKVKC--AD--AHAIASAAYKIEM--NLRVVDSNTVTASFDETTTLEDVDK 522 (1049)
Q Consensus 464 ~g--~~--~v~~~---------~--~~~~v~i~~--~~--~~~v~~~L~~~gI--~~~~~~~~~vris~~~~~t~edid~ 522 (1049)
.. ++ ++... | ..+++.+.+ .+ +.++.++|++... ..+ +..+.+.+-+-. -.++|++.
T Consensus 376 ~~~~~~~~~~~~~~~~~gggs~p~~~~~~~~v~~~~~~~~~~~l~~~lr~~~~~i~~r-~~~~~~~ld~r~-~~~~~~~~ 453 (464)
T PRK04311 376 ALGAAFAVEVVPSFSQVGGGSLPVDRLPSAAVTLTPKDRSLEALAARLRLLPPPVIGR-IEDGRLLLDLRT-LEEEDEER 453 (464)
T ss_pred ccCCCeeEEEEEccCccCCCCCcCCCCCeEEEEEeCCCCCHHHHHHHHhcCCCCEEEE-EECCEEEEEeCc-CCHHHHHH
Confidence 42 23 34311 1 234544443 33 7899999987543 333 456666665543 36678888
Q ss_pred HHHHHh
Q 001586 523 LFIVFA 528 (1049)
Q Consensus 523 lv~aL~ 528 (1049)
++++|.
T Consensus 454 ~~~~~~ 459 (464)
T PRK04311 454 LAAALL 459 (464)
T ss_pred HHHHHH
Confidence 888885
No 223
>PLN02880 tyrosine decarboxylase
Probab=99.66 E-value=1.9e-14 Score=171.94 Aligned_cols=357 Identities=13% Similarity=0.067 Sum_probs=208.9
Q ss_pred CCCCCHHHHHHHHHHHhcCCCc-c--ccccCCCCCCCCCcHHHHHHHHhCCccccccCCChhhHhhhHHHHHHHHHHHHH
Q 001586 145 DEGLTESQMIEHMQKLASMNKV-Y--KSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIA 221 (1049)
Q Consensus 145 ~~~~sE~e~~~~~~~la~~n~~-~--~~~lG~g~y~~~~p~~i~~~~~~~~~~~t~ytpyq~e~sqg~le~l~e~q~~ia 221 (1049)
+++.+-.++++++.+.-..+.. + ..|.|--..+...|+.+.+ ++.. .|=+.-..| +.|.+..+...+.-.+++
T Consensus 57 ~~~~~~~~~l~~~~~~i~~~~~~~~hP~f~~~~~~~~~~~~~lad-~l~~-~~n~~~~~~--~~sp~~~~lE~~vi~wl~ 132 (490)
T PLN02880 57 NQPETLDQVLDDVQAKILPGVTHWQSPNYFAYYPSNSSVAGFLGE-MLSA-GLNIVGFSW--ITSPAATELEMIVLDWLA 132 (490)
T ss_pred CCCCCHHHHHHHHHHHHhcCCCCCCCCCeeEeccCCCcHHHHHHH-HHHH-hhccCCccc--ccCcccHHHHHHHHHHHH
Confidence 5667888999999875444322 2 2343332212223344432 3221 110000111 234455566667778999
Q ss_pred HHhCCCCc-------ceEeccchHHHHH-HHHHHhhhc-c-----C-CCCEEEEcCCCCHHHHHHHHHhhcCCCe-EEEE
Q 001586 222 DLTGLPMS-------NASLLDEGTAAAE-AMAMCNNIQ-K-----G-KKKTFIIASNCHPQTIDICITRADGFDI-KVVV 285 (1049)
Q Consensus 222 ~L~G~~~~-------n~sl~~~~Ta~~e-A~~~a~~~~-~-----~-~g~~Vlv~~~~Hps~~~~l~~~a~~~gi-~v~~ 285 (1049)
+|+|++.. ...+++|||.+.- |+..|+... + . ++-.|++++..|.++.+.++.+ +.|- .++.
T Consensus 133 ~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~aH~Sv~Kaa~~l--Glg~~~v~~ 210 (490)
T PLN02880 133 KLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQTHSALQKACQIA--GIHPENCRL 210 (490)
T ss_pred HHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCCchHHHHHHHHHc--CCCHHHEEE
Confidence 99999864 3667788875543 333343221 0 0 2235668999999999987643 3331 1344
Q ss_pred eCc----------chhhc-cCC------CEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCC----
Q 001586 286 SDL----------KDIDY-KSG------DVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKP---- 343 (1049)
Q Consensus 286 v~~----------~~l~~-l~~------~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~---- 343 (1049)
|+. ++|++ +.+ ...+|+.+.. +.+|.++|+++|+++|+++|++++|++ .++.+.+..
T Consensus 211 Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDpl~eI~~i~~~~~iwlHVDa-A~gg~~~~~~~~~ 289 (490)
T PLN02880 211 LKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDPLLELGKIAKSNGMWFHVDA-AYAGSACICPEYR 289 (490)
T ss_pred eecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCcHHHHHHHHHHcCCEEEEeh-hhHHHHHhCHHHH
Confidence 433 23443 321 2466677776 579999999999999999999999953 223222222
Q ss_pred ---CCcccceEEEecC-ccccccCCCCCCceEEEEEchh--HHhcCC---CceeeeeecCCCCcce-eeecccccccccc
Q 001586 344 ---PGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQE--YKRMMP---GRIVGVSIDSSGKPAL-RVAMQTREQHIRR 413 (1049)
Q Consensus 344 ---p~~~GaDivvgs~-k~lg~P~~~GGP~~G~l~~~~~--l~~~lp---grivG~s~d~~g~~~~-~l~lqtreq~irr 413 (1049)
.+-.+||.++.+. |+++.|.+ +|++++++. +.+.+. +.+.....+..+...+ .+.+ +--||
T Consensus 290 ~~l~gie~aDSit~d~HKwl~~P~~-----~g~llvr~~~~l~~~~~~~~~Yl~~~~~~~~~~~~~~~~~i----~~~rr 360 (490)
T PLN02880 290 HYIDGVEEADSFNMNAHKWFLTNFD-----CSLLWVKDRNALIQSLSTNPEFLKNKASQANSVVDYKDWQI----PLGRR 360 (490)
T ss_pred HHhcCchhcCEEEECchhhcCCCcc-----EEEEEEeCHHHHHHHHccCHHHhcCccccccCCCChhccCc----CCCCc
Confidence 2225799999999 66677764 788999852 222221 0000000000000000 0111 11122
Q ss_pred cccCCCccchhHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEcCCCCcceEEEecCC---------
Q 001586 414 DKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD--------- 484 (1049)
Q Consensus 414 ekaTsni~t~~~l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~g~~~v~~~~~~~~v~i~~~~--------- 484 (1049)
. .++ .+-++ +..+|.+|++++.+++.++++++.+.|++..+++++.++.+..++|+.+.
T Consensus 361 ~---------~al-klw~~--l~~~G~~g~~~~i~~~~~lA~~~~~~l~~~~~~el~~~~~~~iv~Fr~~~~~~~~~~~~ 428 (490)
T PLN02880 361 F---------RSL-KLWMV--LRLYGVENLQSYIRNHIKLAKEFEQLVAQDSRFEVVTPRIFSLVCFRLVPPKNNEDNGN 428 (490)
T ss_pred c---------cHH-HHHHH--HHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCceEEEEEEEeCCCCChhhHH
Confidence 1 111 11112 36899999999999999999999999988745999877667777776531
Q ss_pred --HHHHHHHHHHcC-Ceeeee--c-CCeEEEEeccCCC-HHHHHHHHHHHhC
Q 001586 485 --AHAIASAAYKIE-MNLRVV--D-SNTVTASFDETTT-LEDVDKLFIVFAG 529 (1049)
Q Consensus 485 --~~~v~~~L~~~g-I~~~~~--~-~~~vris~~~~~t-~edid~lv~aL~~ 529 (1049)
..++.++|.+.| +++... . ...+|+|++..+| .+|||++++.+..
T Consensus 429 ~~n~~l~~~l~~~g~~~v~~t~~~g~~~lR~~~~n~~tt~~di~~~~~~i~~ 480 (490)
T PLN02880 429 KLNHDLLDAVNSSGKIFISHTVLSGKYVLRFAVGAPLTEERHVTAAWKVLQD 480 (490)
T ss_pred HHHHHHHHHHHhCCCEEEEEEEECCEEEEEEEecCCCCCHHHHHHHHHHHHH
Confidence 134566666554 444322 2 3579999988766 5999999999964
No 224
>PRK06917 hypothetical protein; Provisional
Probab=99.66 E-value=5.6e-14 Score=166.55 Aligned_cols=343 Identities=16% Similarity=0.145 Sum_probs=210.5
Q ss_pred cccccccccCccccccccccCcccccCCCCCchhhhhcHHHHHHHHHHHHHHhhCCC-ccccccCchHHHHHHHHHHHHH
Q 001586 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFD-SFSLQPNAGAAGEYAGLMVIRA 670 (1049)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~~G~~~~i~el~~~la~l~G~~-~~~l~~~sGa~ge~a~l~air~ 670 (1049)
..+|+|...+..++..+ +....+.....+.. +...++.+.|++++... ...++.+||+++++++++.+|.
T Consensus 43 ~~lGh~hp~v~~Ai~~q-l~~~~~~~~~~~~~--------~~~~~lae~L~~~~p~~~~~v~f~~sGsEAve~AlklAr~ 113 (447)
T PRK06917 43 AGIGHGVKEIADAIKEQ-AEEVSFVYRSQFTS--------EPAEKLAKKLSDLSPGDLNWSFFVNSGSEANETAMKIAIQ 113 (447)
T ss_pred ccCCCCCHHHHHHHHHH-HhhCcCccccccCC--------HHHHHHHHHHHHhCCCCCCEEEEeCChHHHHHHHHHHHHH
Confidence 35788776666555554 22222221101111 23457888999988543 2347789999999999999998
Q ss_pred HHHhcCCCCCCEEE-EcCCCCCccHHHHHhcCC------------EEEEEcCCCC-----C-------CCCHHHHHHHHH
Q 001586 671 YHKARGDHHRNVCI-IPVSAHGTNPATAAMCGM------------KIVSVGTDAK-----G-------NINIEELRKAAE 725 (1049)
Q Consensus 671 y~~~~G~~~r~~VL-ip~saHg~~pa~a~~~G~------------~Vv~V~~d~~-----g-------~iD~~~L~~~i~ 725 (1049)
|...+|.++|++|| ...+.||....+....|. .+..++.... + .-|++++++.++
T Consensus 114 ~~~~rg~t~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~i~ 193 (447)
T PRK06917 114 HFQERGIQGKHKILSRWMSYHGITMGALSMSGHPLRRQRFVSLLEDYPTISAPYCYRCPVQKVYPTCQLACATELETAIE 193 (447)
T ss_pred HHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCCCeEeCCCcccccccCCChHHHHHHHHHHHHHHHH
Confidence 87667766677777 577899987766443321 1222332110 0 013567888887
Q ss_pred hcC-CCeEEEEEEcCC-c-cccccc---cHHHHHHHHHHcCCEEEEeccccccccCcCCCCcc--------CCcEEEeCC
Q 001586 726 ANR-DNLSTLMVTYPS-T-HGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI--------GADVCHLNL 791 (1049)
Q Consensus 726 ~~~-~~taaV~it~Pn-~-~G~i~~---di~eI~~lah~~G~ll~vD~A~~~a~~gl~~Pg~~--------GaDi~~~s~ 791 (1049)
++. +++++|+++... . -|++.+ .+++|.++|+++|+++++|+++ .|+.+.|.+ -+|++++
T Consensus 194 ~~~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~----tGfGRtG~~~a~~~~gv~PDi~~~-- 267 (447)
T PRK06917 194 RIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVM----TGLGRTGAMFAMEHWGVEPDIMTL-- 267 (447)
T ss_pred hcCCCceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechh----hCcCcccchhhHHhcCCCCCEEEe--
Confidence 654 479999888643 2 345542 4899999999999999999974 456566643 3698877
Q ss_pred CcccccCCCCCC-CceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHH
Q 001586 792 HKTFCIPHGGGG-PGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTE 870 (1049)
Q Consensus 792 hK~f~~P~g~GG-Pg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~ 870 (1049)
.|.++ +|- | +|.+.++++++..+.... + .. ...+++.|+++.++++.+.|..+..+++.
T Consensus 268 gK~l~----~G~~P-i~a~~~~~~i~~~~~~~~-----------~--~~-~~~~T~~gnpl~~aaa~a~l~~l~~~~l~- 327 (447)
T PRK06917 268 GKGLG----AGYTP-IAATVVSDRVMEPILRGS-----------R--SI-MSGHTLSANPLSAATALAVLEYMEKHNLP- 327 (447)
T ss_pred eehhc----cCCcc-eEEEEEcHHHHHHHhccC-----------c--cc-ccccCCCCCHHHHHHHHHHHHHHHHCCHH-
Confidence 47763 332 5 556666776665432100 0 00 00112345777788888889888766654
Q ss_pred HHHHHHHHHHHHHHHHhcc---CCee--eccCCCceeeEEEEeccCccccCC----CCHHHHHHHHHHCCcccCCCCC--
Q 001586 871 ASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRGLKNTAG----IEPEDVAKRLMDYGFHGPTMSW-- 939 (1049)
Q Consensus 871 ~~~~~~~~a~yL~~~L~~~---~~v~--~~g~~g~~~~e~iv~~~~~~~~~g----~~~~~v~k~L~~~Gi~~~~~~~-- 939 (1049)
++..++.++|.++|+++ +.++ ..|. |. +..+-+..++...+.. .....+.+.+.++|+.+.....
T Consensus 328 --~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~-Gl-~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~~ 403 (447)
T PRK06917 328 --EKAAEKGEYLIKGLQKVQQQSTIIGDVRGK-GL-LIGVEFVADKKTKQPFSKSQAVASELISVAAKNGLLLYPAVAGQ 403 (447)
T ss_pred --HHHHHHHHHHHHHHHHHHhcCCCEEEEeec-ce-EEEEEEeccCCcCCCCcchhHHHHHHHHHHHhCCcEEEeccccc
Confidence 44556778888888764 3322 1221 22 2112221110000000 0145677888899998742210
Q ss_pred --CCCCEEEEEccCCCCHHHHHHHHHHHHHHHHHHH
Q 001586 940 --PVPGTLMIEPTESESKEELDRYCDALISIREEIA 973 (1049)
Q Consensus 940 --p~~~~lri~~t~~~t~eeid~fv~aL~~i~~~i~ 973 (1049)
+-++.++++|...+|++|||.++++|.++++++.
T Consensus 404 ~g~~~~~i~l~Ppl~it~~eid~~~~~l~~~l~~~~ 439 (447)
T PRK06917 404 DGKEGDAVIIAPPMTITYSELDELLSIFAKSVEEMM 439 (447)
T ss_pred CCCCCCEEEEECCCcCCHHHHHHHHHHHHHHHHHHH
Confidence 0147899999999999999999999999988763
No 225
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.66 E-value=3.1e-14 Score=167.70 Aligned_cols=303 Identities=16% Similarity=0.188 Sum_probs=183.9
Q ss_pred CcHHHHHHHHhCCccccccCCChhhHh-hhHHHHHHHHHHHHHHHhCCCCcceEeccchHHHHHHHHHHhhhccCCCCEE
Q 001586 180 VPPVILRNIMENPAWYTQYTPYQAEIA-QGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTF 258 (1049)
Q Consensus 180 ~p~~i~~~~~~~~~~~t~ytpyq~e~s-qg~le~l~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a~~~~~~~g~~V 258 (1049)
+|+.+.+++.+ ++..|++.....+ ..+-+.+.++++.+|+|+|++. +.++++++++...++.++ . +|++|
T Consensus 93 l~~~vieAv~~---~~~~y~~l~~~l~~g~~g~r~~~le~~lA~l~gae~--alvv~sg~aAi~l~l~~l--~--~GdeV 163 (454)
T TIGR00474 93 LAEEAIEAVTD---AARGYSNLEYDLETGKRGSRYSHVEGLLCELTGAED--ALVVNNNAAAVLLALNTL--A--KGKEV 163 (454)
T ss_pred CCHHHHHHHHH---HHhcccchhccccccccchHHHHHHHHHHHHhCCCc--EEEECCHHHHHHHHHHHh--C--CcCEE
Confidence 56666555554 3444542111121 1123456778899999999987 456788887765544332 2 88999
Q ss_pred EEcCCCCHHHH---HHHHHhhcCCCeEEEEeCc------chhhc-cCCCEeEEEEEcC-CC--Ce--eeccHHHHHHHHH
Q 001586 259 IIASNCHPQTI---DICITRADGFDIKVVVSDL------KDIDY-KSGDVCGVLVQYP-GT--EG--EVLDYGDFIKNAH 323 (1049)
Q Consensus 259 lv~~~~Hps~~---~~l~~~a~~~gi~v~~v~~------~~l~~-l~~~t~~V~v~~p-n~--~G--~i~di~~I~~~ah 323 (1049)
|+++.+|+++- .. ...++..|+++++++. +++++ ++++|++|++.++ |+ .| .+.|+++|+++||
T Consensus 164 Ivs~~e~v~~ggs~~i-~~~~~~~G~~~~~v~~~~~~~l~dle~aI~~~T~lv~~~h~sN~~~~G~~~~~dl~~I~~la~ 242 (454)
T TIGR00474 164 IVSRGELVEIGGSFRI-PDVMEQSGAKLVEVGTTNRTHLKDYEDAITENTALLLKVHTSNYRIVGFTEEVSIAELVALGR 242 (454)
T ss_pred EECCChhhhhcchhhH-HHHHHHcCCEEEEeCCCCCCCHHHHHHhcCcCCEEEEEEccCcccccCCCCCCCHHHHHHHHH
Confidence 99999986431 11 1224567999999875 34555 8899999998775 54 46 5789999999999
Q ss_pred hCCcEEEEEecccc-------ccC-----CCCCCcccceEEEecC-ccccccCCCCCCceEEEEEchhHHhcCCCceeee
Q 001586 324 ANGVKVVMATDLLA-------LTI-----LKPPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGV 390 (1049)
Q Consensus 324 ~~galliV~a~~~a-------lg~-----l~~p~~~GaDivvgs~-k~lg~P~~~GGP~~G~l~~~~~l~~~lpgrivG~ 390 (1049)
++|++++|+. ... +++ +..+.++|||++++|+ |+| |||++|++++++++++++...-++
T Consensus 243 ~~g~~vivD~-~sG~l~~~~~~gl~~~p~~~~~~~~GaDiv~fSg~K~L------gGp~~G~i~g~~~~i~~l~~~~l~- 314 (454)
T TIGR00474 243 EHGLPVMEDL-GSGSLVDLSRYGLPDEPTVQEVIAAGVDLVTFSGDKLL------GGPQAGIIVGKKELIERLKKNPLT- 314 (454)
T ss_pred HcCCeEEEEC-CCcccccchhccCCCCcccccHhHcCCCEEEecCcccc------CCCeEEEEEECHHHHHhhhhchhH-
Confidence 9999999953 110 111 2245679999999999 554 567789999999888766321110
Q ss_pred eecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHH--HH----HHhCcchHHHHH---HHHHHHHHHHHHHh
Q 001586 391 SIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAM--YA----VYHGPEGLKTIA---QRVHGLAGTFALGL 461 (1049)
Q Consensus 391 s~d~~g~~~~~l~lqtreq~irrekaTsni~t~~~l~a~~aa~--y~----~~~g~~Gl~~ia---~~~~~~a~~l~~~L 461 (1049)
| .+|-.|- .+.++.+++ |+ ++..-.|++.+. ++..++|..+++.|
T Consensus 315 ----------------r--~lr~~k~--------~la~l~~~l~~~~~~~~a~~~~~~l~~l~~~~~~~~~~A~~la~~L 368 (454)
T TIGR00474 315 ----------------R--ALRVDKL--------TLAALEATLRLYLDPEKALEKIPTLRMLTQSPEELRARAERLAKRL 368 (454)
T ss_pred ----------------H--HHhhChH--------HHHHHHHHHHHHhCchhhhhhchHHHHhccCHHHHHHHHHHHHHHH
Confidence 0 0111111 122222222 21 233334554443 34556788888888
Q ss_pred hcC--CCe--EEcC-C--------C--CcceEEEec--CC--HHHHHHHHHHcCCee-eeecCCeEEEEeccCCCHHHHH
Q 001586 462 KKL--GTV--EVQG-L--------P--FFDTVKVKC--AD--AHAIASAAYKIEMNL-RVVDSNTVTASFDETTTLEDVD 521 (1049)
Q Consensus 462 ~~~--g~~--~v~~-~--------~--~~~~v~i~~--~~--~~~v~~~L~~~gI~~-~~~~~~~vris~~~~~t~edid 521 (1049)
++. .++ ++.. . | ..+++.+.+ .+ +.++.++|++....+ ..+.++.+.+-+-. -.++|++
T Consensus 369 ~~~~~~~~~~~~~~~~~~~ggg~~p~~~l~~~~v~~~~~~~~~~~l~~~lr~~~~~ii~r~~~~~~~ld~r~-~~~~~~~ 447 (454)
T TIGR00474 369 KAALGPGFELEIVPGLSQVGGGSLPDERLPSYAVTLTPDGLSAEKLEARLRELPPPIIGRIEDDRFLLDLRT-LLEDEEE 447 (454)
T ss_pred HhhccCCceEEEEEcCCcccCCCCcCCCCCeEEEEEecCCCCHHHHHHHHhcCCCCEEEEEECCEEEEEeCc-CCHHHHH
Confidence 763 123 3331 1 1 234444433 33 789999998765432 23455666655443 3567888
Q ss_pred HHHHHH
Q 001586 522 KLFIVF 527 (1049)
Q Consensus 522 ~lv~aL 527 (1049)
.++++|
T Consensus 448 ~~~~~~ 453 (454)
T TIGR00474 448 LLIEAL 453 (454)
T ss_pred HHHHHh
Confidence 888776
No 226
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.66 E-value=1.7e-14 Score=167.93 Aligned_cols=307 Identities=16% Similarity=0.118 Sum_probs=188.8
Q ss_pred HHHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCEEEEEcCCCC-
Q 001586 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK- 712 (1049)
Q Consensus 634 i~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~Vv~V~~d~~- 712 (1049)
..++++.+++++|.+.+ +..++|++|...++.++ +.+++++||++...|..+...+...|++++.++++++
T Consensus 35 ~~~le~~la~~~g~~~~-v~~~sgt~al~lal~al-------~~~~Gd~Viv~~~~~~~~~~~~~~~G~~~v~vd~~~~~ 106 (379)
T PRK11658 35 NQALEQAFCQLTGNQHA-IAVSSATAGMHITLMAL-------GIGPGDEVITPSLTWVSTLNMIVLLGATPVMVDVDRDT 106 (379)
T ss_pred HHHHHHHHHHHhCCCeE-EEECCHHHHHHHHHHHc-------CCCCCCEEEECCCcHHHHHHHHHHcCCEEEEEecCCCc
Confidence 34788999999998764 55667776664443332 1235789999988777666667889999999999865
Q ss_pred CCCCHHHHHHHHHhcCCCeEEEEEEcCCccccccccHHHHHHHHHHcCCEEEEeccccccccCcC-CCCccCCcEEEeCC
Q 001586 713 GNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT-SPGYIGADVCHLNL 791 (1049)
Q Consensus 713 g~iD~~~L~~~i~~~~~~taaV~it~Pn~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~-~Pg~~GaDi~~~s~ 791 (1049)
+.+|+++++++++ ++|++|+.+++ +|... |+++|+++|+++|+++++|+|+..+..-.. ..|.+|.|+..++.
T Consensus 107 ~~~d~~~l~~~i~---~~tkav~~~~~--~G~~~-d~~~i~~~a~~~gi~vi~D~a~a~g~~~~~~~~g~~g~~~~Sf~~ 180 (379)
T PRK11658 107 LMVTPEAIEAAIT---PRTKAIIPVHY--AGAPA-DLDAIRAIGERYGIPVIEDAAHAVGTYYKGRHIGARGTAIFSFHA 180 (379)
T ss_pred CCcCHHHHHHhcc---cCCeEEEEeCC--CCCcC-CHHHHHHHHHHcCCeEEEECCCccCCeECCeecCCCCCEEEeCCC
Confidence 5799999999997 78999886655 68887 899999999999999999999754322111 34677877777766
Q ss_pred CcccccCCCCCCCceeEEEEc-ccccccCCC-CccccCCCC---CCCCC--C--CCCCCCCccchhhHHHHHHHHHHHHH
Q 001586 792 HKTFCIPHGGGGPGMGPIGVK-KHLAPFLPS-HPVVSTGGI---PAPEK--S--QPLGTIAAAPWGSALILPISYTYIAM 862 (1049)
Q Consensus 792 hK~f~~P~g~GGPg~G~i~~~-~~l~~~lpg-~~vg~t~~~---~~~~~--~--~~t~~i~sa~~g~~~~~~~a~a~l~~ 862 (1049)
+|.++ + +.+|+++.+ +++...+.. +..|...+. ...+. . ....+..... +.+.++.. .
T Consensus 181 ~K~l~-----~-g~GG~v~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~G~n~~~--~~l~AAl~-----~ 247 (379)
T PRK11658 181 IKNIT-----C-AEGGLVVTDDDELADRLRSLKFHGLGVDAFDRQTQGRAPQAEVLTPGYKYNL--ADINAAIA-----L 247 (379)
T ss_pred CCcCc-----c-cCceEEEECCHHHHHHHHHHHHcCCCcchhhhhcccCCCcceeeccccccCc--CHHHHHHH-----H
Confidence 77663 2 234566665 444332210 001111000 00000 0 0000000000 12222222 2
Q ss_pred HchhhHHHHHHHHHHHHHHHHHHHhcc-CC-eeeccCC-CceeeEEEEeccCccccCCCCHHHHHHHHHHCCcccCCCC-
Q 001586 863 MGSKGLTEASKIAILNANYMAKRLEKH-YP-ILFRGVN-GTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMS- 938 (1049)
Q Consensus 863 lG~eGl~~~~~~~~~~a~yL~~~L~~~-~~-v~~~g~~-g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~- 938 (1049)
...+++.+..++..++++++.+.|+++ .. +..+... ....+.+++.++. ...+.+.+++.++|.++||.+....
T Consensus 248 ~ql~~l~~~~~~r~~~a~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~r~~~~~~L~~~gI~~~~~~~ 325 (379)
T PRK11658 248 VQLAKLEALNARRREIAARYLQALADLPFQPLSLPAWPHQHAWHLFIIRVDE--ERCGISRDALMEALKERGIGTGLHFR 325 (379)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCcCCCCCCceeEEEEEEEECC--ccccCCHHHHHHHHHHCCCCCcccCc
Confidence 223567777777888899999999875 22 1111110 1122344454431 0124567899999999998754211
Q ss_pred ----------------CCC-----CCEEEEEccCCCCHHHHHHHHHHHHHHH
Q 001586 939 ----------------WPV-----PGTLMIEPTESESKEELDRYCDALISIR 969 (1049)
Q Consensus 939 ----------------~p~-----~~~lri~~t~~~t~eeid~fv~aL~~i~ 969 (1049)
+|. ...+.+-.....|++|+++.+++|+++.
T Consensus 326 ~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lP~~~~l~~~~~~~i~~~i~~~~ 377 (379)
T PRK11658 326 AAHTQKYYRERFPTLSLPNTEWNSERICSLPLFPDMTDADVDRVITALQQIA 377 (379)
T ss_pred CcccChhhhccCCCCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHHHH
Confidence 121 2445555566789999999999998864
No 227
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.66 E-value=2.8e-14 Score=163.83 Aligned_cols=299 Identities=16% Similarity=0.137 Sum_probs=197.5
Q ss_pred CCCCCCCCCcHHHHHHHHhCCccccccCCChhhHhhhHHHHHHHHHHHHHHHhCCCCcceEeccchHHHHHHHHHHhhhc
Q 001586 172 GMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQ 251 (1049)
Q Consensus 172 G~g~y~~~~p~~i~~~~~~~~~~~t~ytpyq~e~sqg~le~l~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a~~~~ 251 (1049)
+.|.++...|+.+.+.+.+.....+.|.+- ++ .++++.+|+++|++..++.+++|+|.++..+++++. .
T Consensus 25 ~~~~~~~~~~~~~~~a~~~~~~~~~~y~~~-----~~-----~~lr~~ia~~~~~~~~~i~~~~G~~~~l~~~~~~l~-~ 93 (346)
T TIGR01141 25 NSNENPFGPPPKAKEALRAEADKLHRYPDP-----DP-----AELKQALADYYGVDPEQILLGNGSDEIIELLIRAFL-E 93 (346)
T ss_pred cCCCCCCCCCHHHHHHHHHhHHHhhcCCCC-----CH-----HHHHHHHHHHhCcChHHEEEcCCHHHHHHHHHHHhc-C
Confidence 566667777777766666532223344321 12 468899999999988899999999988776665542 2
Q ss_pred cCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCcc--------hhhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHH
Q 001586 252 KGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK--------DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKN 321 (1049)
Q Consensus 252 ~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~~~--------~l~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ 321 (1049)
+|++|++++..|+.....+ +..|++++.++.+ ++++ +++++++|++++| |++|.+.|++++.++
T Consensus 94 --~gd~v~~~~p~y~~~~~~~----~~~g~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NptG~~~~~~~~~~l 167 (346)
T TIGR01141 94 --PGDAVLVPPPTYSMYEISA----KIHGAEVVKVPLDEDGQLDLEDILVAIDDKPKLVFLCSPNNPTGNLLSRSDIEAV 167 (346)
T ss_pred --CCCEEEEcCCCHHHHHHHH----HHcCCeEEEeccCCCCCCCHHHHHHhcCCCCCEEEEeCCCCCCCCCCCHHHHHHH
Confidence 7899999998887655543 3468888887652 3444 5778999999988 799999999999999
Q ss_pred HHhC--CcEEEEEeccccccCCCCC----CcccceEEEecC-ccccccCCCCCCceEEEEEchhHHhcCCCceeeeeecC
Q 001586 322 AHAN--GVKVVMATDLLALTILKPP----GELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDS 394 (1049)
Q Consensus 322 ah~~--galliV~a~~~alg~l~~p----~~~GaDivvgs~-k~lg~P~~~GGP~~G~l~~~~~l~~~lpgrivG~s~d~ 394 (1049)
++.+ |++++++.-...+.....+ ...+-+|+++|. |.|+. +|..+|++++++++.+++....
T Consensus 168 ~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~----~G~r~G~~~~~~~~~~~~~~~~------- 236 (346)
T TIGR01141 168 LERTPEDALVVVDEAYGEFSGEPSTLPLLAEYPNLIVLRTLSKAFGL----AGLRIGYAIANAEIIDALNKVR------- 236 (346)
T ss_pred HHhCCCCcEEEEECchhhhcCCccHHHHHhhCCCEEEEehhhHhhhc----hhhhceeeecCHHHHHHHHhcc-------
Confidence 9887 9999984311112111011 122335667775 87753 3456899999888776652100
Q ss_pred CCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEcCCCC
Q 001586 395 SGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPF 474 (1049)
Q Consensus 395 ~g~~~~~l~lqtreq~irrekaTsni~t~~~l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~g~~~v~~~~~ 474 (1049)
.+.+.+ .....+..+ ++.. ...++++.++..++.+++++.|+++.|+++.+..
T Consensus 237 ---------------------~~~~~~-~~~~~~~~~--~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~- 289 (346)
T TIGR01141 237 ---------------------APFNLS-RLAQAAAIA--ALRD--DDFIEKTVEEINAERERLYDGLKKLPGLEVYPSD- 289 (346)
T ss_pred ---------------------CCCCCC-HHHHHHHHH--HhCC--HHHHHHHHHHHHHHHHHHHHHHHhcCCCEECCCc-
Confidence 011111 111111111 1111 1247788888899999999999988338865421
Q ss_pred cceEEEecC-CHHHHHHHHHHcCCeeeeec-----CCeEEEEeccCCCHHHHHHHHHHHh
Q 001586 475 FDTVKVKCA-DAHAIASAAYKIEMNLRVVD-----SNTVTASFDETTTLEDVDKLFIVFA 528 (1049)
Q Consensus 475 ~~~v~i~~~-~~~~v~~~L~~~gI~~~~~~-----~~~vris~~~~~t~edid~lv~aL~ 528 (1049)
..-+.+.++ ..+++.++|.++||.+.... ++.+|+|++ |++|+++++++|+
T Consensus 290 g~~~~~~~~~~~~~~~~~L~~~gI~v~~g~~f~~~~~~iRls~~---~~~~i~~~~~~l~ 346 (346)
T TIGR01141 290 ANFVLIRFPRDADALFEALLEKGIIVRDLNSYPGLPNCLRITVG---TREENDRFLAALR 346 (346)
T ss_pred CCEEEEecCCCHHHHHHHHHHCCeEEEeCCCcCCCCCeEEEecC---CHHHHHHHHHHhC
Confidence 123445555 37889999999999875432 578999976 8999999999874
No 228
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.66 E-value=2.7e-14 Score=163.86 Aligned_cols=310 Identities=16% Similarity=0.145 Sum_probs=201.8
Q ss_pred HHHHHHHHHHhcCC--CccccccCCCCCCCCCcHHHHHHHHhCCccccccCCChhhHhhhHHHHHHHHHHHHHHHhCCCC
Q 001586 151 SQMIEHMQKLASMN--KVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPM 228 (1049)
Q Consensus 151 ~e~~~~~~~la~~n--~~~~~~lG~g~y~~~~p~~i~~~~~~~~~~~t~ytpyq~e~sqg~le~l~e~q~~ia~L~G~~~ 228 (1049)
++.++|+++--++. ...++|+|..-+|....+... .+-. |+ |..+...++++.+|+++|.++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~ylgl~~~~~~~~~~~~-~~~~-------~~--------g~~~~~~~Le~~lA~~~g~~~ 71 (346)
T TIGR03576 8 EKALEIIREKISRGGRDSLYDLTGLAGGFKIDEEDLE-LLET-------YV--------GPAIFEEKVQELGREHLGGPE 71 (346)
T ss_pred HHHHHHHHHHHhccCCccccccccCCCChhHHHHHHH-HHHH-------hc--------CCHHHHHHHHHHHHHHcCCCc
Confidence 45677787766666 458899999987665555442 2222 21 344677888899999999988
Q ss_pred cceEeccchHHHHHHHHHHhhhccCCCCEEEEc---CCCCHHHHHHHHHhhcCCCeEEEEe-CcchhhccCCCEeEEEEE
Q 001586 229 SNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIA---SNCHPQTIDICITRADGFDIKVVVS-DLKDIDYKSGDVCGVLVQ 304 (1049)
Q Consensus 229 ~n~sl~~~~Ta~~eA~~~a~~~~~~~g~~Vlv~---~~~Hps~~~~l~~~a~~~gi~v~~v-~~~~l~~l~~~t~~V~v~ 304 (1049)
.++.+++||+.+..+++.++. ++||+||++ ...|+++...++. .|.++... ++++++. .+++++|+++
T Consensus 72 e~ilv~~gg~~a~~~~~~al~---~~gd~Vli~~~d~p~~~s~~~~~~l----~ga~~~~~~~l~~l~~-~~~~~lIiit 143 (346)
T TIGR03576 72 EKILVFNRTSSAILATILALE---PPGRKVVHYLPEKPAHPSIPRSCKL----AGAEYFESDELSELKK-IDGTSLVVIT 143 (346)
T ss_pred ceEEEECCHHHHHHHHHHHhC---CCCCEEEECCCCCCCchhHHHHHHH----cCCEEeccCCHHHHhh-CcCceEEEEE
Confidence 889999999988887776653 388999864 4699998887653 46665432 3344332 3567888887
Q ss_pred cCCCCeee---ccHHHHHHHHHhCCcEEEEEeccccccCCC-----CCCcccceEEEecC-ccccccCCCCCCceEEEEE
Q 001586 305 YPGTEGEV---LDYGDFIKNAHANGVKVVMATDLLALTILK-----PPGELGADIVVGSA-QRFGVPMGYGGPHAAFLAT 375 (1049)
Q Consensus 305 ~pn~~G~i---~di~~I~~~ah~~galliV~a~~~alg~l~-----~p~~~GaDivvgs~-k~lg~P~~~GGP~~G~l~~ 375 (1049)
.++++|.+ .|+++|+++|+++|++++|+ +.++.+... +..++|+|++++|. |.+ +|+.+||+++
T Consensus 144 g~s~~G~v~~~~~L~~i~~la~~~~~~livD-EAy~~~~~~~~~~~~~~~~~~divv~s~SKal------aG~r~G~v~~ 216 (346)
T TIGR03576 144 GSTMDLKVVSEEDLKRVIKQAKSKEAIVLVD-DASGARVRRLYGQPPALDLGADLVVTSTDKLM------DGPRGGLLAG 216 (346)
T ss_pred CCCCCCcccCHHHHHHHHHHHHHcCCEEEEE-CCccccccccCCCCCHHHcCCcEEEeccchhc------cccceEEEEe
Confidence 77889998 79999999999999999994 444544321 11346889999986 744 3456789999
Q ss_pred chhHHhcCCCceeeeeecCCCCcceeeecccccccccccccCC-CccchhH-HHHHHHHHHHHHhCcchHHHHHHHHHHH
Q 001586 376 SQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATS-NICTAQA-LLANMAAMYAVYHGPEGLKTIAQRVHGL 453 (1049)
Q Consensus 376 ~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irrekaTs-ni~t~~~-l~a~~aa~y~~~~g~~Gl~~ia~~~~~~ 453 (1049)
++++++.|.. ...+ .+|.+.+ ..+..+++ ..+ ..+.+.+...++
T Consensus 217 ~~~li~~l~~-----------------------------~~~~~~~s~~~~~~~aa~~aL--~~~---~~~~~~~~l~~r 262 (346)
T TIGR03576 217 RKELVDKIKS-----------------------------VGEQFGLEAQAPLLAAVVRAL--EEF---ELSRIRDAFKRK 262 (346)
T ss_pred CHHHHHHHHH-----------------------------hhcCcccCccHHHHHHHHHHH--hhc---cHHHHHHHHHHH
Confidence 9888766510 0001 1221122 12222222 221 234566667777
Q ss_pred HHHHHHHhhcCCCeEEcCCC-CcceEEEecCC--H-HHHHHHHHHcCCeeeeec-----CCeEEEEeccCC-CHHHHHHH
Q 001586 454 AGTFALGLKKLGTVEVQGLP-FFDTVKVKCAD--A-HAIASAAYKIEMNLRVVD-----SNTVTASFDETT-TLEDVDKL 523 (1049)
Q Consensus 454 a~~l~~~L~~~g~~~v~~~~-~~~~v~i~~~~--~-~~v~~~L~~~gI~~~~~~-----~~~vris~~~~~-t~edid~l 523 (1049)
.+++.+.++.+ .+...+ .| +.++++. . +.+.+.|.++||.+.... ++.+|+|+.... ++.+.++|
T Consensus 263 ~~~~~~~l~~~---~~~~~~~~f--~~~~~~~~~~~~~~~~ll~~~gV~v~~~~~f~~~~~~vRis~~~~~~~~~~~~~~ 337 (346)
T TIGR03576 263 EEVYLRLFDKL---NVERTPTGF--VIKGVEEEKLIEIGLDLLRNYGIITITAVGMPGASKTLRFDLAAKDAERIGDDYL 337 (346)
T ss_pred HHHHHHHHHhC---CCCcCCCeE--EEEeCCCCCHHHHHHHHHHhCCEEEeCCcccCCCCCeEEEEEecChHHhcCHHHH
Confidence 77777777643 333221 12 3335542 3 455566667899876531 578999998544 44489999
Q ss_pred HHHHhCC
Q 001586 524 FIVFAGG 530 (1049)
Q Consensus 524 v~aL~~~ 530 (1049)
+++|+.+
T Consensus 338 ~~al~~~ 344 (346)
T TIGR03576 338 VEAVKDS 344 (346)
T ss_pred HHHHHhc
Confidence 9999754
No 229
>PLN02590 probable tyrosine decarboxylase
Probab=99.66 E-value=6.2e-14 Score=167.71 Aligned_cols=356 Identities=12% Similarity=0.086 Sum_probs=212.1
Q ss_pred CCCCCHHHHHHHHHHHhcCCCc-c--ccccCCCCCCCCCcHHHHHHHHhCCccccccCCChhhHhhhHHHHHHHHHHHHH
Q 001586 145 DEGLTESQMIEHMQKLASMNKV-Y--KSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIA 221 (1049)
Q Consensus 145 ~~~~sE~e~~~~~~~la~~n~~-~--~~~lG~g~y~~~~p~~i~~~~~~~~~~~t~ytpyq~e~sqg~le~l~e~q~~ia 221 (1049)
+.+.+-.++++++.+....... + ..|.|-=.-+...|+.+.+ ++.. .|-+ ..+.-+.|.+..+...+.-.+++
T Consensus 105 ~~g~~~~~il~~~~~~i~p~~~~~~hP~f~a~~~~~~~~~~~lgd-~l~s-a~n~--~~~~~~~sPa~t~lE~~vi~wl~ 180 (539)
T PLN02590 105 ERPESLKELLDDVSKKIMPGITHWQSPSYFAYYASSTSVAGFLGE-MLNA-GLSV--VGFTWLTSPAATELEIIVLDWLA 180 (539)
T ss_pred CCCCCHHHHHHHHHHHHhccCCcCCCCCeeEeccCCCcHHHHHHH-HHHH-hccc--ccCCcccCchhHHHHHHHHHHHH
Confidence 5677888999999876544332 2 2233321111113333332 3221 1111 22333455666666677778999
Q ss_pred HHhCCCC-------cceEeccchHHHHHHHHH-Hhhhc-c------CCCCEEEEcCCCCHHHHHHHHHhhcCCCe-EEEE
Q 001586 222 DLTGLPM-------SNASLLDEGTAAAEAMAM-CNNIQ-K------GKKKTFIIASNCHPQTIDICITRADGFDI-KVVV 285 (1049)
Q Consensus 222 ~L~G~~~-------~n~sl~~~~Ta~~eA~~~-a~~~~-~------~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi-~v~~ 285 (1049)
+|+|++. +...+++|||.+.-..++ |+... + .++-.|++++..|.++.+.++.+ +.|- .++.
T Consensus 181 ~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~~~~~~~vvy~S~~aH~Sv~KAa~il--Glg~~~vr~ 258 (539)
T PLN02590 181 KLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQLVVYGSDQTHSSFRKACLIG--GIHEENIRL 258 (539)
T ss_pred HHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcccCCCCEEEEecCCchHHHHHHHHHc--CCCcccEEE
Confidence 9999986 346678888854433232 32211 0 02225667899999998887643 2321 3444
Q ss_pred eCc----------chhhc-cCC------CEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCC---
Q 001586 286 SDL----------KDIDY-KSG------DVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPP--- 344 (1049)
Q Consensus 286 v~~----------~~l~~-l~~------~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~p--- 344 (1049)
|+. ++|++ |.. ...+|+.+.. +.+|.++||++|+++|+++|++++|++-.-+..++.+.
T Consensus 259 Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiDpl~~Ia~i~~~~g~WlHVDaA~GG~al~~~~~r~ 338 (539)
T PLN02590 259 LKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAVDPLVPLGNIAKKYGIWLHVDAAYAGNACICPEYRK 338 (539)
T ss_pred EeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccCCHHHHHHHHHHhCCeEEEecchhhhhhcChhhHH
Confidence 443 23443 422 2456777776 57999999999999999999999995422122222211
Q ss_pred ---CcccceEEEecC-ccccccCCCCCCceEEEEEchh--HHhcC--CCceeeeeecCCC-Cc---ceeeeccccccccc
Q 001586 345 ---GELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQE--YKRMM--PGRIVGVSIDSSG-KP---ALRVAMQTREQHIR 412 (1049)
Q Consensus 345 ---~~~GaDivvgs~-k~lg~P~~~GGP~~G~l~~~~~--l~~~l--pgrivG~s~d~~g-~~---~~~l~lqtreq~ir 412 (1049)
+--.||-+..+. |+++.|+. +|++.++++ +.+.+ .+.++....+..+ .. .+.+.+ -|
T Consensus 339 ~~~Gie~ADSit~D~HK~l~~p~~-----cg~llvr~~~~l~~a~~~~~~YL~~~~~~~~~~~d~~d~~i~l------sR 407 (539)
T PLN02590 339 FIDGIENADSFNMNAHKWLFANQT-----CSPLWVKDRYSLIDALKTNPEYLEFKVSKKDTVVNYKDWQISL------SR 407 (539)
T ss_pred HhcCCccCCEEEECchhhcCcCcC-----EEEEEecCHHHHHHHhhcCHHHhCCcccccccCCCccccCCCC------CC
Confidence 223589999999 77777865 677888863 22222 1111110000000 00 011111 13
Q ss_pred ccccCCCccchhHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEcCCCCcceEEEecCC--------
Q 001586 413 RDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD-------- 484 (1049)
Q Consensus 413 rekaTsni~t~~~l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~g~~~v~~~~~~~~v~i~~~~-------- 484 (1049)
|.. + +.+-.+ +.++|.+|++++.+++.++|+++.+.|++..+++++.++.+..|+|+...
T Consensus 408 r~r---------a-LklW~~--lr~~G~~G~~~~i~~~~~lA~~~~~~l~~~~~fel~~~~~l~iVcFr~~~~~~~~~~~ 475 (539)
T PLN02590 408 RFR---------S-LKLWMV--LRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSFEVVTTRYFSLVCFRLAPVDGDEDQC 475 (539)
T ss_pred chH---------H-HHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCceEEEEEEecCCCCCHHHH
Confidence 321 1 122222 47899999999999999999999999998866999987778888886521
Q ss_pred ---HHHHHHHHHHcCCe-eeee--c-CCeEEEEecc-CCCHHHHHHHHHHHhC
Q 001586 485 ---AHAIASAAYKIEMN-LRVV--D-SNTVTASFDE-TTTLEDVDKLFIVFAG 529 (1049)
Q Consensus 485 ---~~~v~~~L~~~gI~-~~~~--~-~~~vris~~~-~~t~edid~lv~aL~~ 529 (1049)
..++.++|.+.|.. +... . ...+|+|+.- .+|++|||.+++.+..
T Consensus 476 ~~ln~~l~~~l~~~G~~~vs~t~~~g~~~lR~~i~n~~T~~~dv~~~~~~i~~ 528 (539)
T PLN02590 476 NERNRELLAAVNSTGKIFISHTALSGKFVLRFAVGAPLTEEKHVTEAWQIIQK 528 (539)
T ss_pred HHHHHHHHHHHHhCCCEEEEeeEECCEEEEEEEecCCCCCHHHHHHHHHHHHH
Confidence 24566666666653 3321 2 2468999855 6778999999998863
No 230
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=99.66 E-value=5.8e-14 Score=166.22 Aligned_cols=292 Identities=17% Similarity=0.188 Sum_probs=182.3
Q ss_pred HHHHHHHHHHhhCCC--ccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEE-EcCCCCCccHHHHHhcCC--------
Q 001586 634 FNNLGEWLCTITGFD--SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGM-------- 702 (1049)
Q Consensus 634 i~el~~~la~l~G~~--~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VL-ip~saHg~~pa~a~~~G~-------- 702 (1049)
..++.++|+++++.+ ...++.+||+++++++++.+|.|. +|++|| ...++||....+....|-
T Consensus 99 ~~~lAe~L~~~~p~~~~~~v~f~~SGsEA~e~AlklAr~~t------gr~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~ 172 (441)
T PRK05769 99 AVELAERLVEIAPGGFEKKVFFTNSGTESNEAAIKIARYHT------GRKYIIAFLGAFHGRTYGSLSLTASKPVQRKGF 172 (441)
T ss_pred HHHHHHHHHHhCCCCCCCEEEECCchHHHHHHHHHHHHHHh------CCCeEEEECCCcCCccHHHHHhcCCCcccccCC
Confidence 447888999988521 234778999999999999998872 345666 678899987665433221
Q ss_pred -----EEEEEcCCCCCC-------------CCHHHHHH-HHHh--cCCCeEEEEEEcC-Cccccccc---cHHHHHHHHH
Q 001586 703 -----KIVSVGTDAKGN-------------INIEELRK-AAEA--NRDNLSTLMVTYP-STHGVYEE---GIDEICKIIH 757 (1049)
Q Consensus 703 -----~Vv~V~~d~~g~-------------iD~~~L~~-~i~~--~~~~taaV~it~P-n~~G~i~~---di~eI~~lah 757 (1049)
.+..++.....+ .+++.+++ .+++ +.+++++|+++.. +..|++.+ .+++|.++|+
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~ 252 (441)
T PRK05769 173 FPLMPGVIHVPYPNPYRNPWGIENPEECGNAVLDFIEDYLFKKLVPPEEVAAIIVEPIQGEGGYVVPPKNFFKELRKLAD 252 (441)
T ss_pred CCCCCCeEEeCCCccccccccCCchHHHHHHHHHHHHHHHHhhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHH
Confidence 244454421100 12344666 3332 3467888887754 34677652 2999999999
Q ss_pred HcCCEEEEeccccccccCcCCCCc------cC--CcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCC
Q 001586 758 DNGGQVYMDGANMNAQVGLTSPGY------IG--ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGG 829 (1049)
Q Consensus 758 ~~G~ll~vD~A~~~a~~gl~~Pg~------~G--aDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~ 829 (1049)
++|+++++|+++. |+.+.|. +| +|++++ .|.++ +| -.+|.+++++++....++.
T Consensus 253 ~~g~lli~DEv~t----G~gr~G~~~a~~~~gv~pDivt~--~K~l~----~G-~p~gav~~~~~i~~~~~~~------- 314 (441)
T PRK05769 253 KYGILLIDDEVQT----GMGRTGKMFAIEHFGVEPDIITL--AKAIA----GG-LPLGAVIGRAELMFLPPGS------- 314 (441)
T ss_pred HcCCEEEEechhh----CCCcccceehhhccCCCCCEEEE--ccccc----CC-cccEEEEEehhhhhcCCCC-------
Confidence 9999999999753 4444442 22 588876 47663 33 4467778887776543211
Q ss_pred CCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc---CCee--eccCCCceeeE
Q 001586 830 IPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHE 904 (1049)
Q Consensus 830 ~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~---~~v~--~~g~~g~~~~e 904 (1049)
+ + +++.|+++.++++.+.|..+.+ ++ .++..++.++|+++|+++ +.+. ..|. | .+..
T Consensus 315 ---~------~---~T~~g~p~~~aaa~a~L~~l~~-~~---~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~-G-~~~~ 376 (441)
T PRK05769 315 ---H------A---NTFGGNPVAAAAALATLEELEE-GL---LENAQKLGEYLRKELKELKEKYEFIGDVRGL-G-LMIG 376 (441)
T ss_pred ---C------C---CCCCcCHHHHHHHHHHHHHHHH-HH---HHHHHHHHHHHHHHHHHHHHhCCCeeeeecc-e-EEEE
Confidence 0 1 1123456667777788888754 43 445567788999988764 3332 1121 2 1212
Q ss_pred EEEeccCccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEccCCCCHHHHHHHHHHHHHHHHH
Q 001586 905 FIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREE 971 (1049)
Q Consensus 905 ~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~eeid~fv~aL~~i~~~ 971 (1049)
+.+.-+. ++........+.+.+.++|+.+.... .+.+|++|+..+|++|||+++++|.+++.+
T Consensus 377 i~~~~~~-~~~~~~~~~~~~~~~~~~Gil~~~~~---~~~lr~~p~l~~t~~~id~~~~~l~~~l~~ 439 (441)
T PRK05769 377 VELVKDR-KEPDPKLRDKVLYEAFKRGLLLLGAG---KSAIRIIPPLIITEEEADIGLEILEEAIKE 439 (441)
T ss_pred EEeccCC-ccccHHHHHHHHHHHHhCCcEEecCC---CCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 2221110 00000113467788889999875322 368999999999999999999999988764
No 231
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.66 E-value=2.5e-14 Score=164.62 Aligned_cols=274 Identities=18% Similarity=0.189 Sum_probs=179.0
Q ss_pred hhHHHHHHHHHHHHHHHhCCCCcceEeccchHHHHHHHHHHhhhccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEe
Q 001586 207 QGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVS 286 (1049)
Q Consensus 207 qg~le~l~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a~~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v 286 (1049)
.|..+...++++.+++++|.+. ++ ++.+|+.+..+++.++ . ++||+|++++..|+++...++. .|++++.+
T Consensus 57 ~g~~~~~~~l~~~la~~~~~~~-~i-~~~~G~~~~~~~l~~~-~--~~gd~v~~~~~~~~~~~~~~~~----~g~~~~~~ 127 (360)
T TIGR00858 57 SGNSPLHEELEEELAEWKGTEA-AL-LFSSGYLANVGVISAL-V--GKGDLILSDALNHASLIDGCRL----SGARVRRY 127 (360)
T ss_pred cCCcHHHHHHHHHHHHHhCCCC-EE-EECchHHHHHHHHHHh-C--CCCCEEEEEccccHHHHHHHHh----cCCceEEe
Confidence 3444556678899999999643 34 4455565555444333 2 3889999999999998887653 46677665
Q ss_pred C---cchhhc-cC----CCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCC----------Ccc
Q 001586 287 D---LKDIDY-KS----GDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPP----------GEL 347 (1049)
Q Consensus 287 ~---~~~l~~-l~----~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~p----------~~~ 347 (1049)
+ ++++++ +. +++++|++.++ |.+|.+.|+++|.++|+++|++++++ +..+.+.+... ...
T Consensus 128 ~~~d~~~l~~~~~~~~~~~~~~v~~~~~~~~~G~~~~~~~i~~l~~~~~~~li~D-e~~~~~~~~~~~~~~~~~~~~~~~ 206 (360)
T TIGR00858 128 RHNDVEHLERLLEKNRGERRKLIVTDGVFSMDGDIAPLPQLVALAERYGAWLMVD-DAHGTGVLGEDGRGTLEHFGLKPE 206 (360)
T ss_pred cCCCHHHHHHHHHHcccCCCeEEEEeCCccCCCCCcCHHHHHHHHHHcCcEEEEE-CcccccCcCCCCCchHHhcCCCcc
Confidence 4 355555 42 35777777776 68999999999999999999999994 33333322110 124
Q ss_pred cceEEEecC-ccccccCCCCCCceEEEEEchhHHhcCCCceeeeeecCCCCcceeeecccccccccccccCCCccchhHH
Q 001586 348 GADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQAL 426 (1049)
Q Consensus 348 GaDivvgs~-k~lg~P~~~GGP~~G~l~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irrekaTsni~t~~~l 426 (1049)
+.||+++|. |.|+. ++ |+++.++++.+.+... .+.+.. . + -+++...
T Consensus 207 ~~~i~i~s~sK~~~~------~g-G~~~~~~~~~~~~~~~----------~~~~~~-----------~--~--~~~~~~~ 254 (360)
T TIGR00858 207 PVDIQVGTLSKALGS------YG-AYVAGSQALIDYLINR----------ARTLIF-----------S--T--ALPPAVA 254 (360)
T ss_pred CCcEEEEechhhhhc------cC-cEEEcCHHHHHHHHHh----------Ccccee-----------c--C--CCCHHHH
Confidence 789999987 77753 22 6887777776554100 000000 0 0 0112233
Q ss_pred HHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEcCCCCcceEEEecCC---HHHHHHHHHHcCCeeeee-
Q 001586 427 LANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD---AHAIASAAYKIEMNLRVV- 502 (1049)
Q Consensus 427 ~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~g~~~v~~~~~~~~v~i~~~~---~~~v~~~L~~~gI~~~~~- 502 (1049)
.+..+++ .++. .++++.++..++.+++.+.|+++| +++... ...-+.+..+. ..++.++|.++||.+...
T Consensus 255 ~a~~~al--~~~~--~~~~~~~~~~~~~~~l~~~L~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~gI~v~~~~ 328 (360)
T TIGR00858 255 AAALAAL--ELIQ--EEPWRREKLLALIARLRAGLEALG-FTLMPS-CTPIVPVIIGDNASALALAEELQQQGIFVGAIR 328 (360)
T ss_pred HHHHHHH--HHHh--hCHHHHHHHHHHHHHHHHHHHHcC-CccCCC-CCCEEEEEeCCHHHHHHHHHHHHHCCeeEeeeC
Confidence 3444444 2222 235677888999999999999887 776532 12234455543 568999999999988532
Q ss_pred ------cCCeEEEEeccCCCHHHHHHHHHHHh
Q 001586 503 ------DSNTVTASFDETTTLEDVDKLFIVFA 528 (1049)
Q Consensus 503 ------~~~~vris~~~~~t~edid~lv~aL~ 528 (1049)
..+.+|++++.++|++|+++++++|+
T Consensus 329 ~~~~~~~~~~iRis~~~~~~~~~i~~~l~~l~ 360 (360)
T TIGR00858 329 PPTVPAGTSRLRLTLSAAHTPGDIDRLAEALK 360 (360)
T ss_pred CCCCCCCCceEEEEEcCCCCHHHHHHHHHhhC
Confidence 12589999999999999999999874
No 232
>PRK07481 hypothetical protein; Provisional
Probab=99.65 E-value=4.7e-14 Score=167.35 Aligned_cols=308 Identities=17% Similarity=0.176 Sum_probs=191.9
Q ss_pred HHHHHHHHHHhhC---CCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEE-EcCCCCCccHHHHHhcC--------
Q 001586 634 FNNLGEWLCTITG---FDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCG-------- 701 (1049)
Q Consensus 634 i~el~~~la~l~G---~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VL-ip~saHg~~pa~a~~~G-------- 701 (1049)
..++.+.|+++++ ++. .++.+||+++++++++.+|.|...+|.++|++|| ...++||....+....|
T Consensus 88 ~~~lae~L~~~~~~~~~~~-v~f~~sGsEAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~ 166 (449)
T PRK07481 88 AIELSYELIDMFAPEGMRR-VFFSSGGSDSVETALKLARQYWKVRGQPERTKFISLKQGYHGTHFGGASVNGNTVFRRNY 166 (449)
T ss_pred HHHHHHHHHHhcCCCCCCE-EEEcCchHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhccCCCccccccc
Confidence 4478888999884 333 4778999999999999999987666655566776 67889997655432211
Q ss_pred ----CEEEEEcCCCC-----CCCCHHH--------HHHHHH-hcCCCeEEEEEEcCC-ccccccc---cHHHHHHHHHHc
Q 001586 702 ----MKIVSVGTDAK-----GNINIEE--------LRKAAE-ANRDNLSTLMVTYPS-THGVYEE---GIDEICKIIHDN 759 (1049)
Q Consensus 702 ----~~Vv~V~~d~~-----g~iD~~~--------L~~~i~-~~~~~taaV~it~Pn-~~G~i~~---di~eI~~lah~~ 759 (1049)
..+..++.... +..|+++ +++.+. ++.+++++|+++... ..|++.+ .++++.++|+++
T Consensus 167 ~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~le~~i~~~~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~ 246 (449)
T PRK07481 167 EPLLPGCFHVETPWLYRNPFTEQDPEELARICARLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREVCDRH 246 (449)
T ss_pred CCCCCCCEEeCCCcccccccCCCCHHHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCcCCccCCHHHHHHHHHHHHHc
Confidence 11333332211 1124444 344443 344789999988653 4576653 399999999999
Q ss_pred CCEEEEeccccccccCcCCCCcc--------CCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCC
Q 001586 760 GGQVYMDGANMNAQVGLTSPGYI--------GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIP 831 (1049)
Q Consensus 760 G~ll~vD~A~~~a~~gl~~Pg~~--------GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~ 831 (1049)
|+++++|++ +.|+.+.|.+ -+|++++ .|.++ +|.-.+|.++++++++..+..... .
T Consensus 247 g~llI~DEV----~tGfGRtG~~~a~~~~gv~PDiv~~--gKgl~----gG~~Pi~av~~~~~i~~~~~~~~~---~--- 310 (449)
T PRK07481 247 GILLIADEV----VTGFGRTGSWFGSRGWGVKPDIMCL--AKGIT----SGYVPLGATMVNARIADAFEANAD---F--- 310 (449)
T ss_pred CCEEEEeeh----hhCcCcCchhhHhhhcCCCCCEEEE--eeccc----CCCcCceEEEEcHHHHHHHhccCc---c---
Confidence 999999987 4566666532 3799888 48763 332235667777776654421100 0
Q ss_pred CCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc---CCee--eccCCCceeeEEE
Q 001586 832 APEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFI 906 (1049)
Q Consensus 832 ~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~---~~v~--~~g~~g~~~~e~i 906 (1049)
... ....+++.|+++.++++.+.|..+.++++.+ +..++.++|.++|+++ +.++ ..|. |. +..+-
T Consensus 311 ----~~~-~~h~~T~~gnpl~~aaa~a~L~~l~~~~l~~---~~~~~g~~l~~~L~~l~~~~~~i~~vrG~-Gl-m~gi~ 380 (449)
T PRK07481 311 ----GGA-IMHGYTYSGHPVACAAALATLDIVVREDLPA---NAAKRGAYLLEGLQPLKERFELVGDVRGK-GL-MLALD 380 (449)
T ss_pred ----ccc-cccCCCCCCCHHHHHHHHHHHHHHHhhhHHH---HHHHHHHHHHHHHHHHhhcCCCeEEEeec-ce-EEEEE
Confidence 000 0011224467788888899999887766544 4446677888888764 3322 1221 32 21121
Q ss_pred EeccC-ccccCC---CCHHHHHHHHHHCCcccCCCCCCCCCEEEEEccCCCCHHHHHHHHHHHHHHHHHH
Q 001586 907 VDLRG-LKNTAG---IEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEI 972 (1049)
Q Consensus 907 v~~~~-~~~~~g---~~~~~v~k~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~eeid~fv~aL~~i~~~i 972 (1049)
+..+. .+.... .....+.++|.++|+.+... ++.++++|....|++|||.++++|.++++++
T Consensus 381 l~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~----g~~i~l~Ppl~it~~eid~~~~~l~~~l~~~ 446 (449)
T PRK07481 381 LVADKATREPIDPSKGYANAVADVARENGVLVRPS----GTKIILSPPLVIQREDVDRIVDALDAGLSAV 446 (449)
T ss_pred ecccccccCCCCchhHHHHHHHHHHHhCCeEEEec----CCEEEEECCCCCCHHHHHHHHHHHHHHHHhc
Confidence 21110 000000 01346778888999987532 3578999999999999999999999987653
No 233
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.65 E-value=3.1e-14 Score=166.10 Aligned_cols=213 Identities=22% Similarity=0.212 Sum_probs=154.0
Q ss_pred HHHHHHHHHHHhCCCCcceEeccchHHHHHHHHHHhhhccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCcc---
Q 001586 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK--- 289 (1049)
Q Consensus 213 l~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a~~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~~~--- 289 (1049)
+.++++.+|+++|.+. +.++.+|++++.++++++ .. +||+||+++..|+.+...++..++..|+++++++.+
T Consensus 63 ~~~le~~la~l~g~~~--~v~~ssG~~Ai~~al~al-~~--~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~ 137 (390)
T PRK08133 63 VTMFQERLAALEGAEA--CVATASGMAAILAVVMAL-LQ--AGDHVVSSRSLFGSTVSLFEKIFARFGIETTFVDLTDLD 137 (390)
T ss_pred HHHHHHHHHHHhCCCc--EEEECCHHHHHHHHHHHH-hC--CCCEEEEccCcchhHHHHHHHHHHHcCcEEEEECCCCHH
Confidence 4567889999999864 678899998887766665 23 789999999999999888776667789999999874
Q ss_pred hhhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCCC
Q 001586 290 DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYG 366 (1049)
Q Consensus 290 ~l~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~p~~~GaDivvgs~-k~lg~P~~~G 366 (1049)
++++ ++++|++|++++| |++|.+.|+++|+++||++|++++|+ +.++.+....|.++|+|++++|. |.++++ |
T Consensus 138 ~l~~~i~~~tklV~ie~p~NptG~v~dl~~I~~la~~~gi~livD-~t~~~~~~~~pl~~g~Divv~S~sK~~~g~---g 213 (390)
T PRK08133 138 AWRAAVRPNTKLFFLETPSNPLTELADIAALAEIAHAAGALLVVD-NCFCTPALQQPLKLGADVVIHSATKYLDGQ---G 213 (390)
T ss_pred HHHHhcCcCCeEEEEECCCCCCCCcCCHHHHHHHHHHcCCEEEEE-CCCcccccCCchhhCCcEEEeecceeecCC---c
Confidence 4555 7889999999998 78999999999999999999999994 44555556667789999999998 777532 1
Q ss_pred CCceEEEEEchhHHhcCCCceeeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcchHHHH
Q 001586 367 GPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTI 446 (1049)
Q Consensus 367 GP~~G~l~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irrekaTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i 446 (1049)
-.-+|+++.++++.+++- ..++..+ ++.++.. + ++...|.+-+...
T Consensus 214 ~~~GG~vv~~~~~~~~~~-------------------------~~~~~~g----~~~~~~~---a--~~~l~gl~tl~~R 259 (390)
T PRK08133 214 RVLGGAVVGSKELMEEVF-------------------------GFLRTAG----PTLSPFN---A--WVFLKGLETLSLR 259 (390)
T ss_pred ceEeEEEEcCHHHHHHHH-------------------------HHHHHhC----CCCCHHH---H--HHHHcccchHHHH
Confidence 122367777666543320 0011111 0111211 1 1233455567777
Q ss_pred HHHHHHHHHHHHHHhhcCCCeE
Q 001586 447 AQRVHGLAGTFALGLKKLGTVE 468 (1049)
Q Consensus 447 a~~~~~~a~~l~~~L~~~g~~~ 468 (1049)
.++..+++.++++.|++..+++
T Consensus 260 ~~~~~~~a~~la~~L~~~p~v~ 281 (390)
T PRK08133 260 MEAHSANALALAEWLEAHPGVE 281 (390)
T ss_pred HHHHHHHHHHHHHHHHhCCCee
Confidence 7777899999999999874464
No 234
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.65 E-value=9.3e-15 Score=177.55 Aligned_cols=308 Identities=11% Similarity=0.084 Sum_probs=196.5
Q ss_pred HHHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHH-HHhcCCEEEEEcCCCC
Q 001586 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT-AAMCGMKIVSVGTDAK 712 (1049)
Q Consensus 634 i~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~-a~~~G~~Vv~V~~d~~ 712 (1049)
+.|.|+..++++|.+.+-+..|++++|+.++++++. +++++||+++.+|-+.... ..+.|++.++++...+
T Consensus 176 i~eAq~~AA~~fgAd~tyFlvNGTS~gn~a~i~a~~--------~~Gd~VLvdRN~HKSv~hgaLiLsGa~PVYl~P~~n 247 (720)
T PRK13578 176 AKDAQKHAAKVFNADKTYFVLNGTSASNKVVTNALL--------TPGDLVLFDRNNHKSNHHGALIQAGATPVYLETARN 247 (720)
T ss_pred HHHHHHHHHHHhCCCceEEEeCChhHHHHHHHHHhc--------CCCCEEEeecccHHHHHHHHHHHcCCeEEEeecccc
Confidence 779999999999999988888999989987777653 2678999999999987775 7899999999976542
Q ss_pred -----CCCCHHH-----HHHHHHhcCCC-------eEEEEEEcCCccccccccHHHHHHH-HHHcCCEEEEecccccccc
Q 001586 713 -----GNINIEE-----LRKAAEANRDN-------LSTLMVTYPSTHGVYEEGIDEICKI-IHDNGGQVYMDGANMNAQV 774 (1049)
Q Consensus 713 -----g~iD~~~-----L~~~i~~~~~~-------taaV~it~Pn~~G~i~~di~eI~~l-ah~~G~ll~vD~A~~~a~~ 774 (1049)
|.++.++ ++++|+++.++ .+++++++|++.|++. |+++|+++ +|.++ .++||+|+.. ..
T Consensus 248 ~~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pTYdG~~y-di~~I~~~~~h~~~-~llvDEAhga-h~ 324 (720)
T PRK13578 248 PFGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGTYDGTIY-NARQVVDKIGHLCD-YILFDSAWVG-YE 324 (720)
T ss_pred ccCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECCCCcceee-cHHHHHHHhhccCC-cEEEeCcchh-hh
Confidence 4567655 99999876322 6899999999999998 89999998 68888 9999998742 22
Q ss_pred CcC-----CC---CccCCc----EEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCC-CCC
Q 001586 775 GLT-----SP---GYIGAD----VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQP-LGT 841 (1049)
Q Consensus 775 gl~-----~P---g~~GaD----i~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~-t~~ 841 (1049)
.|. .| .+.|+| +++-|.||+++ +--..+.|-++...... ..+.+.. + +...... ...
T Consensus 325 ~F~p~~~~~p~~al~~GaD~p~i~v~QStHKtL~-----alTQaS~LHvk~~~i~g-~~~~v~~--~--r~~~al~m~qS 394 (720)
T PRK13578 325 QFIPMMADCSPLLLELNENDPGIFVTQSVHKQQA-----GFSQTSQIHKKDNHIKG-QARYCPH--K--RLNNAFMLHAS 394 (720)
T ss_pred ccCcccccCChhhhhcCCCCCCeEEEEChhhcch-----hhhhHhhhhcCCccccc-ccccCCH--H--HHHHHHHHHcC
Confidence 221 12 467999 99999999985 11233555554432110 0000000 0 0000000 011
Q ss_pred CCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHH-hcc--CCeeec-----------------------
Q 001586 842 IAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRL-EKH--YPILFR----------------------- 895 (1049)
Q Consensus 842 i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L-~~~--~~v~~~----------------------- 895 (1049)
++ ..|.....+-.+..++.. ..| ++..+..++.+..++++| +.. +++..+
T Consensus 395 TS-PsY~LmASLDva~~~m~~--~~G-~~l~~~~i~~a~~~R~~l~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~w 470 (720)
T PRK13578 395 TS-PFYPLFAALDVNAKMHEG--ESG-RRLWMECVKLGIEARKLILARCKLIRPFIPPVVDGKPWQDYPTEQIASDLRFF 470 (720)
T ss_pred CC-hHHHHHHHHHHHHHHHHH--hhC-HHHHHHHHHHHHHHHHHHHHhCCCeeecccccccccccccCchhhhccccccc
Confidence 11 122222222233333332 234 234455667777777777 332 332200
Q ss_pred ----cCC--------------CceeeEEEEeccCcc------ccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEccC
Q 001586 896 ----GVN--------------GTVAHEFIVDLRGLK------NTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTE 951 (1049)
Q Consensus 896 ----g~~--------------g~~~~e~iv~~~~~~------~~~g~~~~~v~k~L~~~Gi~~~~~~~p~~~~lri~~t~ 951 (1049)
+.. +|. -+++.++.+. .+.|+++..+.+.|.++||.+-... ...+++-++.
T Consensus 471 ~~~p~~~whgf~~~~~~~~~lDP~--KltI~t~G~~~~~G~~~~~Gipg~~l~~~L~e~gI~~E~~d---~~~vL~l~s~ 545 (720)
T PRK13578 471 SFEPGEKWHGFEGYAEDQYFVDPC--KLLLTTPGIDAETGEYEDFGIPATILANYLRENGIVPEKCD---LNSILFLLTP 545 (720)
T ss_pred ccccCccccccccccccccccCCc--eEEEEcCCcCcccccccccCccHHHHHHHHHHcCCEEEecC---CCeEEEEeCC
Confidence 000 011 1222222111 1124558899999988899875433 3678888888
Q ss_pred CCCHHHHHHHHHHHHHHHHH
Q 001586 952 SESKEELDRYCDALISIREE 971 (1049)
Q Consensus 952 ~~t~eeid~fv~aL~~i~~~ 971 (1049)
.++++++++|+++|.++.+.
T Consensus 546 g~t~~~~~~Lv~aL~~f~~~ 565 (720)
T PRK13578 546 AEDMAKLQQLVAMLARFEKH 565 (720)
T ss_pred CCCHHHHHHHHHHHHHHHHh
Confidence 99999999999999988544
No 235
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.65 E-value=1.2e-14 Score=171.13 Aligned_cols=143 Identities=20% Similarity=0.154 Sum_probs=119.4
Q ss_pred HHHHHHHHHHHHhCCCCcceEeccchHHHHHHHHHHhhhccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCcch-
Q 001586 212 SLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKD- 290 (1049)
Q Consensus 212 ~l~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a~~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~~~~- 290 (1049)
...++++.+|++.|.+. +.++.+||+|+.+++.++ +. +||+||++..+|+++...+...++.+|++++++|+++
T Consensus 65 ~~~~le~~lA~l~g~~~--av~~sSGt~Al~~al~~l-l~--~Gd~Vi~~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~ 139 (433)
T PRK08134 65 TVAVLEERVAALEGGVG--AIATASGQAALHLAIATL-MG--AGSHIVASSALYGGSHNLLHYTLRRFGIETTFVKPGDI 139 (433)
T ss_pred HHHHHHHHHHHHhCCCc--EEEeCCHHHHHHHHHHHH-hC--CCCEEEEeCCccHHHHHHHHHHHhhCCeEEEEECCCCH
Confidence 35667899999999876 678999998888777665 33 8899999999999998887665667899999998754
Q ss_pred --hhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-cccc
Q 001586 291 --IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFG 360 (1049)
Q Consensus 291 --l~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~p~~~GaDivvgs~-k~lg 360 (1049)
+++ ++++|++|++++| |++|.+.|+++|+++||++|++++|+ ..++.+.+..|.++|||+++.|+ |.++
T Consensus 140 ~~l~~~i~~~TklV~~e~~~np~g~v~Di~~I~~la~~~gi~livD-~t~a~~~~~~pl~~GaD~vv~S~tK~l~ 213 (433)
T PRK08134 140 DGWRAAIRPNTRLLFGETLGNPGLEVLDIPTVAAIAHEAGVPLLVD-STFTTPYLLRPFEHGADLVYHSATKFLG 213 (433)
T ss_pred HHHHHhcCCCCeEEEEECCCcccCcccCHHHHHHHHHHcCCEEEEE-CCCcccccCCchhcCCCEEEeccccccC
Confidence 555 7899999999987 78999999999999999999999995 34566666677899999999999 5443
No 236
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.65 E-value=1.4e-14 Score=167.87 Aligned_cols=216 Identities=13% Similarity=0.099 Sum_probs=155.3
Q ss_pred HHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHH----HHhcCCEEEEEcCC
Q 001586 635 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGTD 710 (1049)
Q Consensus 635 ~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~----a~~~G~~Vv~V~~d 710 (1049)
..+++.+++|-|.+.+ +...||..|..++++++. +++++||++...|+..... ++..|+++.+++.
T Consensus 65 ~~le~~la~LEg~~~a-~~~~SGmaAi~~~~~~ll--------~~GD~Vv~~~~~Yg~t~~l~~~~l~~~Gi~v~~vd~- 134 (395)
T PRK08114 65 FSLQEAMCELEGGAGC-ALYPCGAAAVANAILAFV--------EQGDHVLMTGTAYEPTQDFCSKILSKLGVTTTWFDP- 134 (395)
T ss_pred HHHHHHHHHHhCCCeE-EEEhHHHHHHHHHHHHHc--------CCCCEEEEeCCCcHHHHHHHHHHHHhcCcEEEEECC-
Confidence 3678999999988765 445567766654544431 2578999988777554433 3558999999885
Q ss_pred CCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CccccccccHHHHHHHHHHcC--CEEEEeccccccccCcCCCCccCCcEE
Q 001586 711 AKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNG--GQVYMDGANMNAQVGLTSPGYIGADVC 787 (1049)
Q Consensus 711 ~~g~iD~~~L~~~i~~~~~~taaV~it~P-n~~G~i~~di~eI~~lah~~G--~ll~vD~A~~~a~~gl~~Pg~~GaDi~ 787 (1049)
.|.++++++++ ++|++|+++.| |.+|.+. ||++|+++||++| ++++||+++.. +.+.+|-++|+|++
T Consensus 135 ----~d~~~l~~~l~---~~TrlV~~EtpsNp~~~v~-DI~~Ia~ia~~~g~g~~lvVDnT~a~--p~~~~pl~~GaDiv 204 (395)
T PRK08114 135 ----LIGADIAKLIQ---PNTKVVFLESPGSITMEVH-DVPAIVAAVRSVNPDAVIMIDNTWAA--GVLFKALDFGIDIS 204 (395)
T ss_pred ----CCHHHHHHhcC---CCceEEEEECCCCCCCEee-cHHHHHHHHHHhCCCCEEEEECCCcc--ccccCHHHcCCcEE
Confidence 57899999997 78999999999 4689887 8999999999985 99999988653 33478999999999
Q ss_pred EeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhh
Q 001586 788 HLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (1049)
Q Consensus 788 ~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eG 867 (1049)
+.|.||+++-+ +.-++|+++.++++...+-. ..+.++...+ |+ -+|+...|-+-
T Consensus 205 v~S~tKyl~Gh---sdv~~G~v~~~~~~~~~l~~-------------~~~~~G~~~~-p~---------~a~l~~rgl~T 258 (395)
T PRK08114 205 IQAGTKYLVGH---SDAMIGTAVANARCWEQLRE-------------NSYLMGQMVD-AD---------TAYMTSRGLRT 258 (395)
T ss_pred EEcCcccccCC---CcceeEEEEcCHHHHHHHHH-------------HHHhccCCCC-HH---------HHHHHHcCCCc
Confidence 99999999511 22267877776544322110 0011122221 11 24566777788
Q ss_pred HHHHHHHHHHHHHHHHHHHhcc---CCeeecc
Q 001586 868 LTEASKIAILNANYMAKRLEKH---YPILFRG 896 (1049)
Q Consensus 868 l~~~~~~~~~~a~yL~~~L~~~---~~v~~~g 896 (1049)
|.-+.++..++|..+++.|+++ -+|.|+|
T Consensus 259 L~lR~~~~~~na~~va~~L~~hp~V~~V~yPg 290 (395)
T PRK08114 259 LGVRLRQHEESSLKVAEWLAEHPEVARVNHPA 290 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCEeEEECCC
Confidence 8888899999999999999987 3456665
No 237
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.65 E-value=7.4e-14 Score=165.30 Aligned_cols=298 Identities=21% Similarity=0.199 Sum_probs=188.8
Q ss_pred HHHHHHHHHHhhCCC-ccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEE-EcCCCCCccHHHHHhcCC---------
Q 001586 634 FNNLGEWLCTITGFD-SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGM--------- 702 (1049)
Q Consensus 634 i~el~~~la~l~G~~-~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VL-ip~saHg~~pa~a~~~G~--------- 702 (1049)
..++.+.|+++++.. ...++.+||+++++++++.+|.|. +|.+|+ ...+.||....+....|.
T Consensus 86 ~~~la~~L~~~~p~~~~~v~f~~sGsEAve~AlklAr~~t------gr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~ 159 (443)
T PRK08360 86 PLLLAEKLIEIAPGDNPKVSFGLSGSDANDGAIKFARAYT------KRRKILSYLRSYYGSTYGAMSLTGLDFPVRALVG 159 (443)
T ss_pred HHHHHHHHHHhCCCCCCEEEEcCCHHHHHHHHHHHHHHhc------CCCeEEEEeCCcCCcCHHHHHhcCCCcccccCCC
Confidence 447888899998653 235778999999999999988872 355666 567899987554333221
Q ss_pred ---EEEEEcCCCCCC------------CCHHHHHHHHHh--cCCCeEEEEEEcC-Cccccccc---cHHHHHHHHHHcCC
Q 001586 703 ---KIVSVGTDAKGN------------INIEELRKAAEA--NRDNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGG 761 (1049)
Q Consensus 703 ---~Vv~V~~d~~g~------------iD~~~L~~~i~~--~~~~taaV~it~P-n~~G~i~~---di~eI~~lah~~G~ 761 (1049)
.+..+|...... .+++.+++++++ +.+++++|+++.- +..|++.+ .+++|.++|+++|+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~ 239 (443)
T PRK08360 160 ELSDVHYIPYPDCYRCPFGKEPGSCKMECVEYIKEKFEGEVYAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGI 239 (443)
T ss_pred CCCCcEEEeCCccccccccCchhhhHHHHHHHHHHHHHhccCCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCC
Confidence 234444422110 235567777764 2468999988743 45786653 49999999999999
Q ss_pred EEEEeccccccccCcCCCCc--------cCCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCC
Q 001586 762 QVYMDGANMNAQVGLTSPGY--------IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAP 833 (1049)
Q Consensus 762 ll~vD~A~~~a~~gl~~Pg~--------~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~ 833 (1049)
++++|+++. ++.+.|. .-.|++++ .|.++ +|..+|++++++++...+.... +
T Consensus 240 llI~DEv~~----g~gr~G~~~a~~~~~~~pDiitl--sK~l~-----~G~pigav~~~~~i~~~~~~~~---------~ 299 (443)
T PRK08360 240 LLVVDEVQS----GLGRTGKWFAIEHFGVEPDIITL--GKPLG-----GGLPISATIGRAEIMDSLPPLA---------H 299 (443)
T ss_pred EEEEecccc----CCCcCccchhhhhcCCCCCEEEe--ccccc-----CCceeEEEEEcHHHHhhhcCCC---------C
Confidence 999999853 3333331 23688766 58774 3455788888877766553110 0
Q ss_pred CCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc---CCee--eccCCCceeeEEEEe
Q 001586 834 EKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVD 908 (1049)
Q Consensus 834 ~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~---~~v~--~~g~~g~~~~e~iv~ 908 (1049)
... ..++++.+.++.+.|..+..+++. ++...+..+|.++|+++ +.++ ..| .| .+..+-+.
T Consensus 300 -----~~T----~~~~p~~~aaa~a~l~~l~~~~l~---~~~~~~g~~l~~~L~~l~~~~~~v~~vrg-~G-l~~gie~~ 365 (443)
T PRK08360 300 -----AFT----LSGNPVASAAALAVIEEIEEKNLL---KRAEKLGNYTKKRLEEMKKKHELIGDVRG-IG-LMIGVDLV 365 (443)
T ss_pred -----CCC----CCcCHHHHHHHHHHHHHHHHcCHH---HHHHHHHHHHHHHHHHHHHhCCCeeeeec-cc-eEEEEEEe
Confidence 011 123455566777888877665543 45556777888888764 3332 112 12 22111121
Q ss_pred ccCcccc-CCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEccCCCCHHHHHHHHHHHHHHHHHHHH
Q 001586 909 LRGLKNT-AGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQ 974 (1049)
Q Consensus 909 ~~~~~~~-~g~~~~~v~k~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~eeid~fv~aL~~i~~~i~~ 974 (1049)
.+.-.+. ....+..+..+|.++|+.+.... .+.+|++|+..+|++|||+++++|.+++..++.
T Consensus 366 ~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~---~~~lr~~P~l~~t~~~id~~~~~l~~~l~~~~~ 429 (443)
T PRK08360 366 KDRETKERAYEEAAKVVWRAWELGLIVTFFS---GNVLRIQPPLTIEKEVLDEGLDILEEAIEDVEE 429 (443)
T ss_pred cCCcccCccHHHHHHHHHHHHHCCeEEeecC---CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 1100000 00123568888999999875332 478999999999999999999999998877543
No 238
>PRK12403 putative aminotransferase; Provisional
Probab=99.65 E-value=8.3e-14 Score=165.67 Aligned_cols=307 Identities=16% Similarity=0.179 Sum_probs=189.2
Q ss_pred HHHHHHHHHHHhhCCC-ccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEE-EcCCCCCccHHHHHhcCCE-------
Q 001586 633 MFNNLGEWLCTITGFD-SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGMK------- 703 (1049)
Q Consensus 633 ~i~el~~~la~l~G~~-~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VL-ip~saHg~~pa~a~~~G~~------- 703 (1049)
...++.++|+++++.+ ...++.+||+++++++++++|.|...+|.+++.+|+ ...++||..-......|.+
T Consensus 99 ~~~~lae~L~~~~p~~~~~v~f~~SGseA~e~AiklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~~~s~s~~~~~~~~~~ 178 (460)
T PRK12403 99 AVIELSELLFSLLPGHYSHAIYTNSGSEANEVLIRTVRRYWQVLGKPQKKIMIGRWNGYHGSTLAATALGGMKFMHEMGG 178 (460)
T ss_pred HHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHhhCCCCCcEEEEECCCcCcccHhhhhcCCCccccccCC
Confidence 3557889999998733 224778999999999999999886545543344454 3567799765554433322
Q ss_pred ----EEEEcCCCC-----C-------CCCHHHHHHHHHh-cCCCeEEEEEEcC-Ccccccccc---HHHHHHHHHHcCCE
Q 001586 704 ----IVSVGTDAK-----G-------NINIEELRKAAEA-NRDNLSTLMVTYP-STHGVYEEG---IDEICKIIHDNGGQ 762 (1049)
Q Consensus 704 ----Vv~V~~d~~-----g-------~iD~~~L~~~i~~-~~~~taaV~it~P-n~~G~i~~d---i~eI~~lah~~G~l 762 (1049)
+..+|.... + ..++++|++.+.+ +.+++++|+++.. +..|++.++ +++|.++|++||++
T Consensus 179 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~l 258 (460)
T PRK12403 179 LIPDVAHIDEPYWYANGGELTPAEFGRRAALQLEEKILELGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVL 258 (460)
T ss_pred CCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHHhCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCE
Confidence 334442110 0 0124667666643 3467888888754 446777632 99999999999999
Q ss_pred EEEeccccccccCcCCCCcc--------CCcEEEeCCCcccccCCCCCC-CceeEEEEcccccccCCCCccccCCCCCCC
Q 001586 763 VYMDGANMNAQVGLTSPGYI--------GADVCHLNLHKTFCIPHGGGG-PGMGPIGVKKHLAPFLPSHPVVSTGGIPAP 833 (1049)
Q Consensus 763 l~vD~A~~~a~~gl~~Pg~~--------GaDi~~~s~hK~f~~P~g~GG-Pg~G~i~~~~~l~~~lpg~~vg~t~~~~~~ 833 (1049)
+++|++ ++|+.+.|.+ -+|++++ .|.++ +|- |-.|++ +++++.+.+....
T Consensus 259 LI~DEV----~tGfGRtG~~~a~e~~gv~PDiv~~--gK~lg----gG~~Piga~v-~~~~i~~~~~~~~---------- 317 (460)
T PRK12403 259 LCADEV----IGGFGRTGEWFAHEHFGFEPDTLSI--AKGLT----SGYVPMGGLV-LSKRIAEALVEQG---------- 317 (460)
T ss_pred EEEecc----ccCCCcCchhhhhhhcCCCCCeEEE--ccccc----ccccceEEEE-ECHHHHHHHhcCC----------
Confidence 999997 4566666643 3688876 57763 332 554544 6776665442100
Q ss_pred CCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHH-HHHHHHHHHHhcc---CCee--eccCCCceeeEEEE
Q 001586 834 EKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAI-LNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIV 907 (1049)
Q Consensus 834 ~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~-~~a~yL~~~L~~~---~~v~--~~g~~g~~~~e~iv 907 (1049)
+ . ....+++.|+++.++++.+.|..+-++++. ++.. .+.++|+++|++. +.++ ..|. | .+..+-+
T Consensus 318 -~--~-~~~~~T~~gnPl~~Aaala~L~~i~~~~l~---~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~-G-l~~gie~ 388 (460)
T PRK12403 318 -G--V-FAHGLTYSGHPVAAAVAIANLKALRDEGVV---TRVKDDTGPYLQRCLREVFGDHPLVGEVQGA-G-LVAALQF 388 (460)
T ss_pred -C--c-cccCCCCCCCHHHHHHHHHHHHHHHhccHH---HHHHHHHHHHHHHHHHHHHhcCCCEEeEeec-c-eEEEEEE
Confidence 0 0 001122446778888888999988777654 3342 5677888888653 3322 1221 3 2222222
Q ss_pred eccCccccCCCC----HHHHHHHHHHCCcccCCCCCCCCCEEEEEccCCCCHHHHHHHHHHHHHHHHHHH
Q 001586 908 DLRGLKNTAGIE----PEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIA 973 (1049)
Q Consensus 908 ~~~~~~~~~g~~----~~~v~k~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~eeid~fv~aL~~i~~~i~ 973 (1049)
..+.-.+..... ...+.+.+.++|+.+... .+.++++|....|++|||+++++|.++++++.
T Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~----~~~~~l~Ppl~it~~eid~~~~~l~~al~~~~ 454 (460)
T PRK12403 389 AEDKATRKRFANENDLAWRCRTIGFEEGVIIRST----LGRMIMAPALVAGRAEIDELVDKTRIAVDRTA 454 (460)
T ss_pred ccCccccccccchhHHHHHHHHHHHhCCEEEEec----CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 111000000001 223456668899987522 36789999999999999999999999998874
No 239
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.65 E-value=5.3e-14 Score=165.38 Aligned_cols=290 Identities=17% Similarity=0.195 Sum_probs=184.3
Q ss_pred HHHHHHHHHHhh--C--CC-ccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEE-EcCCCCCccHHHHHhc-------
Q 001586 634 FNNLGEWLCTIT--G--FD-SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMC------- 700 (1049)
Q Consensus 634 i~el~~~la~l~--G--~~-~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VL-ip~saHg~~pa~a~~~------- 700 (1049)
..++.++|++++ + .+ .+.+..+||+++++++++.+|.| + +|++|| ...+.||....+....
T Consensus 80 ~~~lae~l~~~~~~~~~~~~~~~f~~~sGseA~e~AlklAr~~---t---gr~~ii~~~~~yHG~t~~als~~~~~~~~~ 153 (412)
T TIGR02407 80 KREFLETFNEIILKPRGLDYKVQFPGPTGTNAVESALKLARKV---T---GRSNVVSFTNAFHGMTLGSLSVTGNRFKRQ 153 (412)
T ss_pred HHHHHHHHHHhccCccCCCceEEEeCCCchHHHHHHHHHHhhh---c---CCCeEEEECCCcCCchHHHHHhcCCccccc
Confidence 446778888874 2 22 23345689999999999999876 2 345666 6788999876654322
Q ss_pred --C---CEEEEEcCCCCC---CCCHHHHHHHHHhcC---CCeEEEEEEcC-Ccccccc---ccHHHHHHHHHHcCCEEEE
Q 001586 701 --G---MKIVSVGTDAKG---NINIEELRKAAEANR---DNLSTLMVTYP-STHGVYE---EGIDEICKIIHDNGGQVYM 765 (1049)
Q Consensus 701 --G---~~Vv~V~~d~~g---~iD~~~L~~~i~~~~---~~taaV~it~P-n~~G~i~---~di~eI~~lah~~G~ll~v 765 (1049)
| ..++.+|..... .-|++++++.++++. +++++|+++.. +..|++. ..+++|.++|+++|+++++
T Consensus 154 ~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~ 233 (412)
T TIGR02407 154 GAGVPLSNVSRMPYDGYLGGDVDTIAYFEKLLEDSSSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIV 233 (412)
T ss_pred CCCCCCCCeEECCCCCccccchhHHHHHHHHHHhccCCCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEE
Confidence 1 134555553211 135788999887553 46788887643 4467653 2599999999999999999
Q ss_pred eccccccccCcCCCCc--------cCCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCC
Q 001586 766 DGANMNAQVGLTSPGY--------IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQ 837 (1049)
Q Consensus 766 D~A~~~a~~gl~~Pg~--------~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~ 837 (1049)
|+++ .|+.+.|. ..+|++++ .|+++ +||-.+|++++++++ ..+.... +
T Consensus 234 DEV~----tG~GRtG~~~a~~~~~v~PDi~~~--~K~lg----~~G~pigav~~~~~~-~~~~~~~---------~---- 289 (412)
T TIGR02407 234 DDIQ----AGCGRTGTFFSFEPAGIEPDIVCL--SKSIS----GYGLPLALTLIKPEL-DVWKPGE---------H---- 289 (412)
T ss_pred echh----hCCCccchhHHhcccCCCCCEEEe--chhcc----CCccceeEEEEchhh-hccCCCc---------c----
Confidence 9974 44544432 35798876 48773 324457888888765 3322100 0
Q ss_pred CCCCCCccchhhHHHHHHHHHHHHH-HchhhHHHHHHHHHHHHHHHHHHHhcc---CC-eeeccC-CCceeeEEEEeccC
Q 001586 838 PLGTIAAAPWGSALILPISYTYIAM-MGSKGLTEASKIAILNANYMAKRLEKH---YP-ILFRGV-NGTVAHEFIVDLRG 911 (1049)
Q Consensus 838 ~t~~i~sa~~g~~~~~~~a~a~l~~-lG~eGl~~~~~~~~~~a~yL~~~L~~~---~~-v~~~g~-~g~~~~e~iv~~~~ 911 (1049)
.+++.|+++.++++.+.+.. +..+.+. ++..+..+++.++|+.+ +. +...-+ .|. + +.+.++.
T Consensus 290 -----~~T~~gnpl~~aaa~a~l~~~i~~~~l~---~~~~~~g~~l~~~l~~l~~~~~~~~~~vrg~Gl-~--~~l~l~~ 358 (412)
T TIGR02407 290 -----NGTFRGNNLAFVTATAALEYYWSDDAFE---KAVQRKSEIIQERLDRIVAEYPELIKQVRGRGL-M--QGIECGD 358 (412)
T ss_pred -----CCCCCccHHHHHHHHHHHHHHhcccHHH---HHHHHHHHHHHHHHHHHHhhCCCceEeeeccee-E--EEEEecC
Confidence 01123456666666777774 6554444 34445667888887753 22 211111 122 1 2344431
Q ss_pred ccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEccCCCCHHHHHHHHHHHHHHHH
Q 001586 912 LKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIRE 970 (1049)
Q Consensus 912 ~~~~~g~~~~~v~k~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~eeid~fv~aL~~i~~ 970 (1049)
......+.+.|.++|+.+.... +..+.+|++|+..+|++|+|+++++|.++++
T Consensus 359 -----~~~~~~~~~~~~~~Gv~v~~~~-~~~~~lr~~p~l~~t~~~i~~~~~~l~~~l~ 411 (412)
T TIGR02407 359 -----GDLAGKIAKAAFENGLIIETSG-PNDEVIKLLPPLTIDEETLQQGLDILEQAVE 411 (412)
T ss_pred -----hHHHHHHHHHHHHCCCEEeccC-CCCCEEEEECCCCCCHHHHHHHHHHHHHHHh
Confidence 1234678889999999875322 1247899999999999999999999998865
No 240
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=99.65 E-value=4.2e-14 Score=166.84 Aligned_cols=299 Identities=16% Similarity=0.203 Sum_probs=191.7
Q ss_pred HHHHHHHHHHhhCCCc-cccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEE-EcCCCCCccHHHHHhcCC---------
Q 001586 634 FNNLGEWLCTITGFDS-FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGM--------- 702 (1049)
Q Consensus 634 i~el~~~la~l~G~~~-~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VL-ip~saHg~~pa~a~~~G~--------- 702 (1049)
..++.++|+++++-+. ..++.++|+++++++++.+|.|...+|.++|.+|| +..+.||..-.+..+.|-
T Consensus 90 ~~~la~~l~~~~~~~~~~v~f~~sGseA~e~AlklAr~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~ 169 (427)
T TIGR00508 90 AIELCQKLVKMTPNALDCVFLADSGSVAVEVALKMALQYWQAKGEKNRQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYK 169 (427)
T ss_pred HHHHHHHHHhhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhhCCCCccEEEEEcCCcCCccHhhhcccCCccccccccc
Confidence 3467788888885432 34778899999999999999886555544456666 688899876544332221
Q ss_pred ----EEEEEcCCCC------CCCCHHHHHHHHHhcCCCeEEEEEEcC-Cc-ccccc---ccHHHHHHHHHHcCCEEEEec
Q 001586 703 ----KIVSVGTDAK------GNINIEELRKAAEANRDNLSTLMVTYP-ST-HGVYE---EGIDEICKIIHDNGGQVYMDG 767 (1049)
Q Consensus 703 ----~Vv~V~~d~~------g~iD~~~L~~~i~~~~~~taaV~it~P-n~-~G~i~---~di~eI~~lah~~G~ll~vD~ 767 (1049)
.+..++.... ..-|+++++++++++.+++++|+++.. .. .|++. .++++|+++|+++|+++++|+
T Consensus 170 ~~~~~~~~~~~p~~~~~~~~~~~~~~~l~~~l~~~~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DE 249 (427)
T TIGR00508 170 GYLPEQIFAPAPQNRFDEEWNEEAITPLAKLMELHSDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADE 249 (427)
T ss_pred ccCCCCeEcCCCCccccchhHHHHHHHHHHHHHhcCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEec
Confidence 1122322111 112678888899876678889888753 43 44432 369999999999999999999
Q ss_pred cccccccCcCCCCc--------cCCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCC
Q 001586 768 ANMNAQVGLTSPGY--------IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPL 839 (1049)
Q Consensus 768 A~~~a~~gl~~Pg~--------~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t 839 (1049)
++ .|+.+.|. ..+|++++ .|.| ++|-.-++.++.++++...+.....+ .
T Consensus 250 v~----tG~Gr~G~~~~~~~~~v~pDi~~~--gK~l----~gG~~p~~a~~~~~~~~~~~~~~~~~------------~- 306 (427)
T TIGR00508 250 IA----TGFGRTGKLFACEHAGVVPDILCV--GKAL----TGGYMTLSATVTTDKVAQTISSGEAG------------C- 306 (427)
T ss_pred cc----cCCCcCCccchhhhcCCCCCEEEe--chhh----hcCcccceEEEEcHHHHHHHhcCCCC------------c-
Confidence 85 33444442 24688875 5877 23324456777777765544211000 0
Q ss_pred CCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc--CCee--eccCCCceeeEEEEeccCcccc
Q 001586 840 GTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPIL--FRGVNGTVAHEFIVDLRGLKNT 915 (1049)
Q Consensus 840 ~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~--~~v~--~~g~~g~~~~e~iv~~~~~~~~ 915 (1049)
....+++.|++..++++.+.|..+..+.+. ++...+.++|.++|+++ .... ..|. |. +.. +.+..
T Consensus 307 ~~~~~T~~g~p~~~aaa~a~l~~l~~~~~~---~~~~~~~~~l~~~L~~l~~~~~i~~vrg~-G~-~~~--i~~~~---- 375 (427)
T TIGR00508 307 FMHGPTFMGNPLACAVAEASLAILLEGEWQ---KQVSAIENQLKRELSPLRKNPVVKDVRVL-GA-IGV--VEMYK---- 375 (427)
T ss_pred cccCCCCCcCHHHHHHHHHHHHHHHhCCHH---HHHHHHHHHHHHHHHHhhcCCCEEeEecc-cc-EEE--EEECC----
Confidence 001112334566777788888887665543 55667788999999875 2211 1111 22 222 22221
Q ss_pred CCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEccCCCCHHHHHHHHHHHHHHHHH
Q 001586 916 AGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREE 971 (1049)
Q Consensus 916 ~g~~~~~v~k~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~eeid~fv~aL~~i~~~ 971 (1049)
......+.++|.++|+.+... .+.+|++|+..+|++|||+++++|.+++.+
T Consensus 376 -~~~~~~~~~~l~~~Gv~~~~~----~~~l~~~ppl~~t~~~id~~~~~l~~~l~~ 426 (427)
T TIGR00508 376 -PVNVEELQKKFVEQGVWIRPF----GKLIYVMPPYIITTEQLQKLTAALIEALHE 426 (427)
T ss_pred -ccCHHHHHHHHHHCCeEEEec----CCEEEEECCCCCCHHHHHHHHHHHHHHHhc
Confidence 134678999999999998532 368999999999999999999999988753
No 241
>PLN00175 aminotransferase family protein; Provisional
Probab=99.65 E-value=3.2e-14 Score=167.52 Aligned_cols=330 Identities=17% Similarity=0.163 Sum_probs=201.2
Q ss_pred cccccccccccCccccccccc----cCcccccCCCCCchhhhhcHHHHHHHHHHHHHHhhCCC--cc-ccccCchH-HHH
Q 001586 590 SMIPLGSCTMKLNATTEMMPV----TWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFD--SF-SLQPNAGA-AGE 661 (1049)
Q Consensus 590 ~~i~lGs~t~~~~~~~~~~~~----~~~~f~~~~P~~p~e~~~G~~~~i~el~~~la~l~G~~--~~-~l~~~sGa-~ge 661 (1049)
+++.|+.|.+..+........ ..... +.|.+ .+|..++...+.+++.+..|.+ .. .+..++|+ +|.
T Consensus 55 ~~i~l~~G~P~~~~~~~~~~~~~~~~~~~~---~~Y~~---~~G~~~Lr~aia~~~~~~~g~~~~~~~~I~vt~G~~~al 128 (413)
T PLN00175 55 GAINLGQGFPNFDGPDFVKEAAIQAIRDGK---NQYAR---GFGVPELNSAIAERFKKDTGLVVDPEKEVTVTSGCTEAI 128 (413)
T ss_pred CeEecCCCCCCCCCCHHHHHHHHHHHhcCC---CCcCC---CCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCHHHHH
Confidence 467788776655433221111 11111 23333 3576677777777777776754 22 35455554 444
Q ss_pred HHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCEEEEEcCCC-CCCCCHHHHHHHHHhcCCCeEEEEEEcCC
Q 001586 662 YAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA-KGNINIEELRKAAEANRDNLSTLMVTYPS 740 (1049)
Q Consensus 662 ~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~Vv~V~~d~-~g~iD~~~L~~~i~~~~~~taaV~it~Pn 740 (1049)
.. +++.+. .++++|+++...+..+...++..|.+++.+++++ ++.+|+++|+++++ +++++|++++|+
T Consensus 129 ~~---~~~~l~-----~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~l~~~~~---~~~k~i~i~~p~ 197 (413)
T PLN00175 129 AA---TILGLI-----NPGDEVILFAPFYDSYEATLSMAGAKIKTVTLRPPDFAVPEDELKAAFT---SKTRAILINTPH 197 (413)
T ss_pred HH---HHHHhC-----CCCCEEEEeCCCchhHHHHHHHcCCEEEEEECCcccCCCCHHHHHHhcC---cCceEEEecCCC
Confidence 32 233221 2578999998877666667888999999999874 46899999999997 688999999995
Q ss_pred -cccccc--ccHHHHHHHHHHcCCEEEEeccccccc-cC-cC----CCCccCCcEEEeCCCcccccCCCCCCCceeEEEE
Q 001586 741 -THGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQ-VG-LT----SPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGV 811 (1049)
Q Consensus 741 -~~G~i~--~di~eI~~lah~~G~ll~vD~A~~~a~-~g-l~----~Pg~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~ 811 (1049)
.+|.+- +++++|+++|+++|+++++|+++..-. .+ .. .++..+-.|++.|+.|.|++| |.++|++++
T Consensus 198 NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~s~~~~~~~~~~vi~i~SfSK~~~~~----G~RiG~~v~ 273 (413)
T PLN00175 198 NPTGKMFTREELELIASLCKENDVLAFTDEVYDKLAFEGDHISMASLPGMYERTVTMNSLGKTFSLT----GWKIGWAIA 273 (413)
T ss_pred CCCCcCCCHHHHHHHHHHHHHcCcEEEEecccCccccCCcccChhhCCCCcCcEEEEecchhhccCc----chheeeeEe
Confidence 589774 258999999999999999999864211 11 00 112123347778888988654 788999999
Q ss_pred cccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc-C
Q 001586 812 KKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-Y 890 (1049)
Q Consensus 812 ~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~-~ 890 (1049)
++++...+-.. .. ....+.+...+. ++..+|. .+.+-+.+..+...++.+++.+.|++. +
T Consensus 274 ~~~l~~~l~~~------------~~--~~~~~~s~~~Q~----a~~~~l~-~~~~~~~~~~~~~~~~~~~l~~~L~~~g~ 334 (413)
T PLN00175 274 PPHLTWGVRQA------------HS--FLTFATATPMQW----AAVAALR-APESYYEELKRDYSAKKDILVEGLKEVGF 334 (413)
T ss_pred CHHHHHHHHHH------------Hh--hccCCCCHHHHH----HHHHHHh-CCHHHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 87765543100 00 011121111121 1223332 233335556666777888999999875 3
Q ss_pred CeeeccCCCceeeEEEEeccCccccCCC-CHHHHHHHHH-HCCccc-CCCCC-C----CCCEEEEEccCCCCHHHHHHHH
Q 001586 891 PILFRGVNGTVAHEFIVDLRGLKNTAGI-EPEDVAKRLM-DYGFHG-PTMSW-P----VPGTLMIEPTESESKEELDRYC 962 (1049)
Q Consensus 891 ~v~~~g~~g~~~~e~iv~~~~~~~~~g~-~~~~v~k~L~-~~Gi~~-~~~~~-p----~~~~lri~~t~~~t~eeid~fv 962 (1049)
.+. .+.+.++ +.+++.+ .+. +..++++.|. ++|+.+ +...| + ..+++|+++.. ++++++..+
T Consensus 335 ~~~--~p~g~~f--~~~~~~~----~~~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~~~iRls~~~--~~e~l~~~~ 404 (413)
T PLN00175 335 KVY--PSSGTYF--VMVDHTP----FGFENDIAFCEYLIEEVGVAAIPPSVFYLNPEDGKNLVRFAFCK--DEETLRAAV 404 (413)
T ss_pred eec--CCCeeEE--EEEeccc----cCCCCHHHHHHHHHHhCCEEEeCchHhCCCCCCCCCEEEEEEcC--CHHHHHHHH
Confidence 332 2223222 3455431 123 4578888886 569875 33223 1 24689999973 688888888
Q ss_pred HHHHHHH
Q 001586 963 DALISIR 969 (1049)
Q Consensus 963 ~aL~~i~ 969 (1049)
+.|.+++
T Consensus 405 ~rL~~~~ 411 (413)
T PLN00175 405 ERMKTKL 411 (413)
T ss_pred HHHHHHH
Confidence 8887764
No 242
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.65 E-value=8.6e-15 Score=167.23 Aligned_cols=272 Identities=18% Similarity=0.110 Sum_probs=173.8
Q ss_pred HHHHHHHHHHHhCCCCcceEeccchHHHHHHHHHHhhhccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc----
Q 001586 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---- 288 (1049)
Q Consensus 213 l~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a~~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~~---- 288 (1049)
..++++.+++++| ..++.++.+||.+...++.++ .++|++|++++..|+++...+. .+...|++++.++.
T Consensus 34 ~~~l~~~~a~~~g--~~~~~~~~~gt~a~~~~~~~l---~~~gd~v~~~~~~~~~~~~~~~-~~~~~g~~~~~v~~~~~~ 107 (338)
T cd06502 34 TAKLEARAAELFG--KEAALFVPSGTAANQLALAAH---TQPGGSVICHETAHIYTDEAGA-PEFLSGVKLLPVPGENGK 107 (338)
T ss_pred HHHHHHHHHHHhC--CCeEEEecCchHHHHHHHHHh---cCCCCeEEEecCcceeeecCCc-HHHHcCceEEeecCCCCc
Confidence 4556789999999 446778888886655444443 2388999999999987654321 12235888877765
Q ss_pred ---chhhc-cCC-------CEeEEEEEcCCCCeee---ccHHHHHHHHHhCCcEEEEEe-ccc----cccCCCCCCcccc
Q 001586 289 ---KDIDY-KSG-------DVCGVLVQYPGTEGEV---LDYGDFIKNAHANGVKVVMAT-DLL----ALTILKPPGELGA 349 (1049)
Q Consensus 289 ---~~l~~-l~~-------~t~~V~v~~pn~~G~i---~di~~I~~~ah~~galliV~a-~~~----alg~l~~p~~~Ga 349 (1049)
+++++ +.+ ++++|++.+||..|.+ .|+++|+++||++|++++|+. +.. +.+........++
T Consensus 108 ~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~g~~~~~~~l~~i~~~~~~~~~~livDea~~~~~~~~~~~~~~~~~~~~ 187 (338)
T cd06502 108 LTPEDLEAAIRPRDDIHFPPPSLVSLENTTEGGTVYPLDELKAISALAKENGLPLHLDGARLANAAAALGVALKTYKSGV 187 (338)
T ss_pred CCHHHHHHHhhccCCCcCCcceEEEEEeecCCccccCHHHHHHHHHHHHHcCCeEeechHHHHHHHHhcCCCHHHHHhcC
Confidence 34444 443 6899999999666754 578899999999999999942 110 1111001113589
Q ss_pred eEEEecC-ccccccCCCCCCceEEEEEchhHHhcCCCceeeeeecCCCCcceeeecccccccccccccCCCccchhHHHH
Q 001586 350 DIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLA 428 (1049)
Q Consensus 350 Divvgs~-k~lg~P~~~GGP~~G~l~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irrekaTsni~t~~~l~a 428 (1049)
|+++.+. |+|+.| +.++++.++++.+++..... + ..++.+. .++.+
T Consensus 188 d~~~~s~sK~~~~~------~g~~~~~~~~~~~~~~~~~~--------------------~----~~~~~~~---~~~~~ 234 (338)
T cd06502 188 DSVSFCLSKGGGAP------VGAVVVGNRDFIARARRRRK--------------------Q----AGGGMRQ---SGFLA 234 (338)
T ss_pred CEEEEeccccCCCc------cceEEECCHHHHHHHHHHHH--------------------H----hCCChhh---HHHHH
Confidence 9998887 777654 33566777777665521000 0 0011111 12211
Q ss_pred HHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEcCCCCcceEEEecCC----HHHHHHHHH---HcCCeeee
Q 001586 429 NMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD----AHAIASAAY---KIEMNLRV 501 (1049)
Q Consensus 429 ~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~g~~~v~~~~~~~~v~i~~~~----~~~v~~~L~---~~gI~~~~ 501 (1049)
.++. ..+...+..+..++..++++++.+.|+++| +.+.+ +..+.+.+..+. ..++.+.|. ++|+.+..
T Consensus 235 -~a~~--~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~-~~~~~-~~~~~~~v~~~~~~~~~~~l~~~l~~~~~~gi~~~~ 309 (338)
T cd06502 235 -AAGL--AALENDLWLRRLRHDHEMARRLAEALEELG-GLESE-VQTNIVLLDPVEANAVFVELSKEAIERRGEGVLFYA 309 (338)
T ss_pred -HHHH--HHhcCchHHHHHHHHHHHHHHHHHHHHhcC-CCccc-ccCCeEEEecCCccHHHHHHHHHHHHhhhCCEEEEe
Confidence 1121 233344566777888999999999999987 65432 223344555442 234444443 57998876
Q ss_pred ecCCeEEEEeccCCCHHHHHHHHHHHh
Q 001586 502 VDSNTVTASFDETTTLEDVDKLFIVFA 528 (1049)
Q Consensus 502 ~~~~~vris~~~~~t~edid~lv~aL~ 528 (1049)
...+.+|++++..+|++|+++++++|.
T Consensus 310 ~~~~~lRi~~~~~~~~~~i~~~~~~l~ 336 (338)
T cd06502 310 WGEGGVRFVTHWDTTEEDVDELLSALK 336 (338)
T ss_pred cCCCeEEEEeecCCCHHHHHHHHHHHh
Confidence 555889999999999999999999985
No 243
>PRK07324 transaminase; Validated
Probab=99.65 E-value=4.4e-14 Score=164.21 Aligned_cols=291 Identities=15% Similarity=0.166 Sum_probs=175.5
Q ss_pred HHHHHHHHhhC-CCcccc-ccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCEEEEEcCCCC-
Q 001586 636 NLGEWLCTITG-FDSFSL-QPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK- 712 (1049)
Q Consensus 636 el~~~la~l~G-~~~~~l-~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~Vv~V~~d~~- 712 (1049)
++++.++++++ .+...+ ..+++++|...++ +.+. .++++||++...+..+...++..|.+++.+|++.+
T Consensus 66 ~lr~~ia~~~~~~~~~~vi~t~G~~~al~~~~---~~l~-----~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~ 137 (373)
T PRK07324 66 EFKEAVASLYQNVKPENILQTNGATGANFLVL---YALV-----EPGDHVISVYPTYQQLYDIPESLGAEVDYWQLKEEN 137 (373)
T ss_pred HHHHHHHHHhcCCChhhEEEcCChHHHHHHHH---HHhC-----CCCCEEEEcCCCchhHHHHHHHcCCEEEEEeccccc
Confidence 56677777664 454444 3444445554333 3321 25688999887776666678889999999998754
Q ss_pred -CCCCHHHHHHHHHhcCCCeEEEEEEcCC-cccccc--ccHHHHHHHHHHcCCEEEEeccccc-cccC-cCCCCcc-CCc
Q 001586 713 -GNINIEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMN-AQVG-LTSPGYI-GAD 785 (1049)
Q Consensus 713 -g~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~--~di~eI~~lah~~G~ll~vD~A~~~-a~~g-l~~Pg~~-GaD 785 (1049)
..+|+++|+++++ +++++|++++|+ .+|.+- .++++|+++|+++|+++++|+++.. ...+ ..+..+. .-.
T Consensus 138 ~~~~d~~~l~~~~~---~~~kli~i~~p~NPtG~~~~~~~l~~i~~~a~~~~~~ii~De~y~~l~~~~~~~s~~~~~~~~ 214 (373)
T PRK07324 138 GWLPDLDELRRLVR---PNTKLICINNANNPTGALMDRAYLEEIVEIARSVDAYVLSDEVYRPLDEDGSTPSIADLYEKG 214 (373)
T ss_pred CCCCCHHHHHHhCC---CCCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCCChhhccCCE
Confidence 3589999999886 789999999995 589775 1389999999999999999997531 1111 1111111 123
Q ss_pred EEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHch
Q 001586 786 VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGS 865 (1049)
Q Consensus 786 i~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~ 865 (1049)
|++.+++|+|++| |.++|++++++.+.+.+... +. ...++.+...+. ++...+. ..
T Consensus 215 I~~~s~SK~~~~~----G~RiG~i~~~~~li~~~~~~------------~~--~~~~~~~~~~q~----~a~~~l~--~~ 270 (373)
T PRK07324 215 ISTNSMSKTYSLP----GIRVGWIAANEEVIDILRKY------------RD--YTMICAGVFDDM----LASLALE--HR 270 (373)
T ss_pred EEEecchhhcCCc----cceeEEEecCHHHHHHHHHH------------hC--cEEecCChHHHH----HHHHHHc--CH
Confidence 6677888988644 78899999877665543210 00 111222111111 1222222 12
Q ss_pred h-hHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHH-HCCcccC-CCCCCCC
Q 001586 866 K-GLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-DYGFHGP-TMSWPVP 942 (1049)
Q Consensus 866 e-Gl~~~~~~~~~~a~yL~~~L~~~~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~-~~Gi~~~-~~~~p~~ 942 (1049)
+ -+++..+...++.+.+.+.|++...+.+..+++..+ +.+.++ .+.+..+++++|. ++|+.+. .-.|...
T Consensus 271 ~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~p~gg~~--~~i~~~-----~~~~~~~~~~~ll~~~gv~v~pg~~F~~~ 343 (373)
T PRK07324 271 DAILERNRKIVRTNLAILDEWVAKEPRVSYVKPKAVST--SFVKLD-----VDMPSEDFCLKLLKETGVLLVPGNRFDLE 343 (373)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCceEECCCceEE--EEEEeC-----CCCCHHHHHHHHHHhcCEEEECccccCCC
Confidence 2 223333444556677888787641221112222222 234443 1346778998875 6798753 3345556
Q ss_pred CEEEEEccCCCCHHHHHHHHHHHHHHHH
Q 001586 943 GTLMIEPTESESKEELDRYCDALISIRE 970 (1049)
Q Consensus 943 ~~lri~~t~~~t~eeid~fv~aL~~i~~ 970 (1049)
+++||+++. +++.++..++.|++.++
T Consensus 344 ~~iRis~~~--~~~~l~~~l~rl~~~l~ 369 (373)
T PRK07324 344 GHVRIGYCC--DTETLKKGLKKLSEFLR 369 (373)
T ss_pred CeEEEEecC--CHHHHHHHHHHHHHHHH
Confidence 899999864 46777777777766654
No 244
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.65 E-value=6.7e-15 Score=162.36 Aligned_cols=290 Identities=18% Similarity=0.150 Sum_probs=184.2
Q ss_pred HHHHHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHH--HHh-cCCEEEEEc
Q 001586 632 EMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT--AAM-CGMKIVSVG 708 (1049)
Q Consensus 632 ~~i~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~--a~~-~G~~Vv~V~ 708 (1049)
+...++++.+++++|... .++..+|++++.-+|.+.. . ++..||+...+|-..... .+. .++....+.
T Consensus 35 ~~~~~~e~~~ae~~g~~a-~~Fv~sGT~aN~lal~~~~----~----~~~~vi~~~~aHi~~~E~Ga~~~~~~~~~~~~~ 105 (342)
T COG2008 35 PTTNALEQRIAELFGKEA-ALFVPSGTQANQLALAAHC----Q----PGESVICHETAHIYTDECGAPEFFGGGQKLPIV 105 (342)
T ss_pred HHHHHHHHHHHHHhCCce-EEEecCccHHHHHHHHHhc----C----CCCeEEEeccccceecccCcHHHHcCCceeccC
Confidence 456789999999999944 4566678777743433321 1 456788888888654432 233 334333344
Q ss_pred CCCCCCCCHHHHHHHHHh----cCCCeEEEEEEcCCcccccc--ccHHHHHHHHHHcCCEEEEecccc-ccccCcCCCC-
Q 001586 709 TDAKGNINIEELRKAAEA----NRDNLSTLMVTYPSTHGVYE--EGIDEICKIIHDNGGQVYMDGANM-NAQVGLTSPG- 780 (1049)
Q Consensus 709 ~d~~g~iD~~~L~~~i~~----~~~~taaV~it~Pn~~G~i~--~di~eI~~lah~~G~ll~vD~A~~-~a~~gl~~Pg- 780 (1049)
..++|.++++++++.|.. |.+...++.++.++..|.+. +.+++|+++||++|+.||+|||-. ++++.+..+-
T Consensus 106 ~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~te~GtVy~l~el~~i~~~~k~~~l~LHmDGAR~~nA~valg~~~~ 185 (342)
T COG2008 106 PGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTATEGGTVYPLDELEAISAVCKEHGLPLHMDGARLANALVALGVALK 185 (342)
T ss_pred CCCCCCcCHHHHHHhhcCCCcccCCCceEEEeeccCCCceecCHHHHHHHHHHHHHhCCceeechHHHHHHHHHcCCCHH
Confidence 357899999999999874 11234444455556678775 258899999999999999999863 4454444321
Q ss_pred --ccCCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHH
Q 001586 781 --YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYT 858 (1049)
Q Consensus 781 --~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a 858 (1049)
..++|++.+++.|.. |.|+..+++.+..+...+.-+ .+.. .+..+ ++..+++.|.
T Consensus 186 ~~~~~~D~v~~~~tK~g------~~~~gAiv~gn~~~~~~a~~~-----------rK~~-Ggl~~-----k~r~laA~~~ 242 (342)
T COG2008 186 TIKSYVDSVSFCLTKGG------GAPVGAIVFGNRDFAKRARRW-----------RKRA-GGLMR-----KARFLAAQGL 242 (342)
T ss_pred HHHhhCCEEEEecccCC------cceeeeEEEcCHHHHHHHHHH-----------HHHh-cccHh-----hhhHHHHHHH
Confidence 348999999998844 456667777777666543210 0011 11222 3344444554
Q ss_pred HHHHHchhhHHHHHHHHHHHHHHHHHHHhcc--CCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHHHCCcccCC
Q 001586 859 YIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPT 936 (1049)
Q Consensus 859 ~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~--~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~ 936 (1049)
+ ++..+-.+....+...+|+.|+++|.+. +++.++ +..|.+.++++ +...+.|...||....
T Consensus 243 ~--~l~~~~~~~~~~Han~mA~~La~~~~~~~G~~~~~~----~~tN~vf~~l~----------~~~i~~l~~~~~~~~~ 306 (342)
T COG2008 243 Y--ALEDDVWRLAADHANAMAARLAEGLEAKPGVKLAFP----VETNMVFVRLP----------ESAIEALRLAGALFYR 306 (342)
T ss_pred H--HHhccHHHHHHHHHHHHHHHHHHhhhhcCCceeccC----CcccEEEEECC----------hHHHHHHHhhchhhee
Confidence 4 4444445556666666699999999854 666543 34666767764 1223667777776532
Q ss_pred --CCCCCCCEEEEEccCCCCHHHHHHHHHHHHHHH
Q 001586 937 --MSWPVPGTLMIEPTESESKEELDRYCDALISIR 969 (1049)
Q Consensus 937 --~~~p~~~~lri~~t~~~t~eeid~fv~aL~~i~ 969 (1049)
+..+....+|+..+..+++++||+|+..+++..
T Consensus 307 ~~~~~~~~~~vRfvts~a~~~edv~~~~~~~~~~~ 341 (342)
T COG2008 307 GVLIGAHGEIVRFVTSWATSEEDVDELVAAIKALL 341 (342)
T ss_pred eeeccCCCceEEEEeeccCCHHHHHHHHHHHHHhh
Confidence 211111379999999999999999999988753
No 245
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.65 E-value=8.4e-14 Score=165.06 Aligned_cols=298 Identities=18% Similarity=0.243 Sum_probs=187.3
Q ss_pred HHHHHHHHHHhhCCC--ccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEE-EcCCCCCccHHHHHhcC---------
Q 001586 634 FNNLGEWLCTITGFD--SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCG--------- 701 (1049)
Q Consensus 634 i~el~~~la~l~G~~--~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VL-ip~saHg~~pa~a~~~G--------- 701 (1049)
..++.+.|+++++-. ...++.+||+++++++++.+|.|. +|.+|| ...++||....+....+
T Consensus 87 ~~~lae~L~~~~p~~~~~~v~f~~SGseA~e~AiklAr~~t------gr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~ 160 (445)
T PRK08593 87 LVRLAKKLCELAPGDFEKRVTFGLSGSDANDGIIKFARAYT------GRPYIISFTNAYHGSTYGSLSMSGISLNMRRKY 160 (445)
T ss_pred HHHHHHHHHHhCCCCCCCEEEECCchHHHHHHHHHHHHHhh------CCCeEEEECCCcCCCcHHHHhhcCCCcccccCC
Confidence 457888999998533 234677999999999999888762 345565 67889998765543322
Q ss_pred ----CEEEEEcCCCC-----CCCC-------HHHHHHHHHhc--CCCeEEEEEEcC-Cccccccc---cHHHHHHHHHHc
Q 001586 702 ----MKIVSVGTDAK-----GNIN-------IEELRKAAEAN--RDNLSTLMVTYP-STHGVYEE---GIDEICKIIHDN 759 (1049)
Q Consensus 702 ----~~Vv~V~~d~~-----g~iD-------~~~L~~~i~~~--~~~taaV~it~P-n~~G~i~~---di~eI~~lah~~ 759 (1049)
..++.+|.... +..+ ++++++.++++ .+++++|+++.. +..|++.+ .+++|.++|++|
T Consensus 161 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~ 240 (445)
T PRK08593 161 GPLLPGFVHIPFPDKYRGMYEEPDANFVEEYLAPLKEMFEKYLPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREH 240 (445)
T ss_pred CCCCCCcEEeCCCccccccccCCcHHHHHHHHHHHHHHHHhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHc
Confidence 12444554321 1111 24566656532 367999988765 34677642 399999999999
Q ss_pred CCEEEEeccccccccCcCCCCcc--------CCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCC
Q 001586 760 GGQVYMDGANMNAQVGLTSPGYI--------GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIP 831 (1049)
Q Consensus 760 G~ll~vD~A~~~a~~gl~~Pg~~--------GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~ 831 (1049)
|+++++|+++ .|+.+.|.+ .+|++++ .|.+ ++|-| +|++++++++.+.+....
T Consensus 241 g~llI~DEv~----tg~GrtG~~~a~~~~gv~pDi~t~--gK~l----~~G~p-~gav~~~~~i~~~~~~~~-------- 301 (445)
T PRK08593 241 GILFAVDDIQ----QGLGRTGKWSSISHFNITPDLMSF--GKSL----AGGMP-MSAIVGRKEIMESLEAPA-------- 301 (445)
T ss_pred CCEEEEechh----hCCCcCchHHHHHhcCCCCCEeee--cccc----cCCcc-cEEEEEcHHHHhhhccCC--------
Confidence 9999999974 344444432 3688766 4766 33334 677888888776653110
Q ss_pred CCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc---CCee--eccCCCceeeEEE
Q 001586 832 APEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFI 906 (1049)
Q Consensus 832 ~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~---~~v~--~~g~~g~~~~e~i 906 (1049)
+ .. +..|+++.++++.+.|..+-++++ .++...+.++|.++|+++ +.++ ..|. |. +..+-
T Consensus 302 -~-----~~----T~~~~pl~~aaa~a~l~~l~~~~l---~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~-Gl-~~gi~ 366 (445)
T PRK08593 302 -H-----LF----TTGANPVSCAAALATIDMIEDESL---LQRSAEKGEYARKRFDQWVSKYNFVGDVRGY-GL-SIGID 366 (445)
T ss_pred -C-----CC----CCCCCHHHHHHHHHHHHHHHhccH---HHHHHHHHHHHHHHHHHHHhcCCcEEEEecc-ce-EEEEE
Confidence 0 01 122455667777888888766544 345556778888888764 3322 1121 22 21121
Q ss_pred EeccC-ccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEccCCCCHHHHHHHHHHHHHHHHHHHH
Q 001586 907 VDLRG-LKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQ 974 (1049)
Q Consensus 907 v~~~~-~~~~~g~~~~~v~k~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~eeid~fv~aL~~i~~~i~~ 974 (1049)
+..+. ...........+.++|.++|+.+.... .+.+|+.|+..+|++|||++++++.++++++..
T Consensus 367 l~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~~---~~~lr~~p~l~~t~~~id~~~~~l~~~l~~~~~ 432 (445)
T PRK08593 367 IVSDKKLKTRDNEAALKICNYCFEHGVVIIAVA---GNVLRFQPPLVITYEQLDTALNTIEQAFTALEA 432 (445)
T ss_pred EecCCCcCCCcHHHHHHHHHHHHHCCeEEeccC---CCEEEEECCCccCHHHHHHHHHHHHHHHHHHhc
Confidence 21110 000000123568888999999875332 478999999999999999999999999877543
No 246
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.65 E-value=2.5e-14 Score=166.94 Aligned_cols=280 Identities=19% Similarity=0.200 Sum_probs=179.6
Q ss_pred HHHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHH----HHHhcCCEEEEEcC
Q 001586 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA----TAAMCGMKIVSVGT 709 (1049)
Q Consensus 634 i~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa----~a~~~G~~Vv~V~~ 709 (1049)
..++++.++++.|.+. .+..++|..+..+++ . .. +++++||++...|+.+.. .+...|++++.++.
T Consensus 56 ~~~le~~lA~l~g~~~-~v~~~sG~~ai~~~l---~-~l-----~~Gd~Vlv~~~~y~~~~~~~~~~~~~~G~~v~~v~~ 125 (390)
T PRK08064 56 REALEDIIAELEGGTK-GFAFASGMAAISTAF---L-LL-----SKGDHVLISEDVYGGTYRMITEVLSRFGIEHTFVDM 125 (390)
T ss_pred HHHHHHHHHHHhCCCC-eEEECCHHHHHHHHH---H-Hh-----CCCCEEEEccCccchHHHHHHHHHHHcCCEEEEECC
Confidence 4578899999999875 455677776554333 2 11 256889998877764332 24568999999987
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-ccccccccHHHHHHHHHHcCCEEEEeccccccccCcCCCCccCCcEEE
Q 001586 710 DAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1049)
Q Consensus 710 d~~g~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~Pg~~GaDi~~ 788 (1049)
+ |+++++++++ ++|++|++++|+ .+|.+. |+++|+++||++|++++||+++... ....|.++|+|+++
T Consensus 126 ~-----d~~~l~~~l~---~~tklV~l~~p~NptG~~~-dl~~I~~la~~~g~~vvvD~a~~~~--~~~~~~~~g~Divv 194 (390)
T PRK08064 126 T-----NLEEVAQNIK---PNTKLFYVETPSNPLLKVT-DIRGVVKLAKAIGCLTFVDNTFLTP--LLQKPLDLGADVVL 194 (390)
T ss_pred C-----CHHHHHHhcC---CCceEEEEECCCCCCcEec-cHHHHHHHHHHcCCEEEEECCCCcc--cccCchhhCCcEEE
Confidence 3 7899999997 789999999995 699987 8999999999999999999986432 23456678999999
Q ss_pred eCCCcccccCCCCCCCceeEEEEcc-cccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhh
Q 001586 789 LNLHKTFCIPHGGGGPGMGPIGVKK-HLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (1049)
Q Consensus 789 ~s~hK~f~~P~g~GGPg~G~i~~~~-~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eG 867 (1049)
.|+||+|+.| +|-..|++++++ ++.+.+... + ...+...+ + ..+| +...|-+.
T Consensus 195 ~S~tK~~~G~---~~~laG~~v~~~~~~~~~l~~~------------~-~~~g~~~~-~-------~~a~--l~~~gl~t 248 (390)
T PRK08064 195 HSATKFLAGH---SDVLAGLAVVKDEELAQKLYFL------------Q-NSFGAVLG-V-------QDCW--LVLRGLKT 248 (390)
T ss_pred eecceeccCC---ccceeEEEEeCCHHHHHHHHHH------------H-HhcCCCCC-H-------HHHH--HHHcccCc
Confidence 9999998521 111247777764 444332100 0 00111111 1 1123 33445555
Q ss_pred HHHHHHHHHHHHHHHHHHHhcc---CCeeeccCCC------------ceeeEEEEeccCccccCCCCHHHHHHHHHHCCc
Q 001586 868 LTEASKIAILNANYMAKRLEKH---YPILFRGVNG------------TVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGF 932 (1049)
Q Consensus 868 l~~~~~~~~~~a~yL~~~L~~~---~~v~~~g~~g------------~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi 932 (1049)
+..+.++...++..+.+.|+++ ..+.|++-.+ .+...+.|++. ..+++.+.+...++
T Consensus 249 l~~R~~~~~~~a~~la~~L~~~~~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~sf~~~--------~~~~~~~f~~~l~l 320 (390)
T PRK08064 249 LHVRLEHSSETANKIALYLQEHPKVQNVYYPGLQTHLGFDIQQSQATSAGAVLSFTLQ--------SEEAVRQFVSHVKL 320 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcceEECCCCCCCccHHHHHHhCCCcceEEEEEEC--------CHHHHHHHHHhCCc
Confidence 6677788888999999999875 3455554211 01112334432 23344444444455
Q ss_pred c-----cCC----------CC---CC--------C-CCEEEEEccCCCCHHHHHHHHHHHHHH
Q 001586 933 H-----GPT----------MS---WP--------V-PGTLMIEPTESESKEELDRYCDALISI 968 (1049)
Q Consensus 933 ~-----~~~----------~~---~p--------~-~~~lri~~t~~~t~eeid~fv~aL~~i 968 (1049)
. .++ +. .| + .+.+|+|+...++++.|+.|.++|.++
T Consensus 321 ~~~~~s~G~~~sl~~~~~~~~h~~~~~~~~~~~gi~~~liR~SvGle~~~dli~dl~~Al~~~ 383 (390)
T PRK08064 321 PVFAVSLGAVESILSYPAKMSHAAMPKEERDERGITDGLLRLSVGLENVDDLIADFEQALSYV 383 (390)
T ss_pred ceEcccCCCCcceeECCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHhc
Confidence 2 110 00 11 2 478999999888777788888777654
No 247
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.65 E-value=7.7e-14 Score=163.87 Aligned_cols=288 Identities=15% Similarity=0.170 Sum_probs=183.5
Q ss_pred HHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEE-EcCCCCCccHHHHHhc------------C
Q 001586 635 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMC------------G 701 (1049)
Q Consensus 635 ~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VL-ip~saHg~~pa~a~~~------------G 701 (1049)
.+++++|+++.+.+. .++.+||++++++++..+|.|...++..++++|| +..+.||......... .
T Consensus 85 ~~l~~~l~~~~~~~~-~~~~~sGseA~e~a~klar~~~~~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~ 163 (403)
T PRK05093 85 LRLAKKLIDATFAER-VFFANSGAEANEAAFKLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKP 163 (403)
T ss_pred HHHHHHHHhhCCCCE-EEEeCchHHHHHHHHHHHHHHHhhcCCCCCCeEEEEcCCcCCchhhhHhhcCChhhhhcCCCCC
Confidence 478899999887654 4778999999999999888875432222344555 6788999876433221 1
Q ss_pred CEEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCCc-ccccc---ccHHHHHHHHHHcCCEEEEeccccccccCcC
Q 001586 702 MKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPST-HGVYE---EGIDEICKIIHDNGGQVYMDGANMNAQVGLT 777 (1049)
Q Consensus 702 ~~Vv~V~~d~~g~iD~~~L~~~i~~~~~~taaV~it~Pn~-~G~i~---~di~eI~~lah~~G~ll~vD~A~~~a~~gl~ 777 (1049)
.+++.++. .|+++++++++ +++++|+++..+. .|++. +.+++|+++|++||+++++|.++. ++.
T Consensus 164 ~~~~~~~~-----~d~~~l~~~l~---~~~aaiiiep~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~----g~g 231 (403)
T PRK05093 164 ADITHVPF-----NDLAAVKAVID---DHTCAVVVEPIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQT----GMG 231 (403)
T ss_pred CCcEEeCC-----CCHHHHHHHhc---CCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh----CCC
Confidence 23445554 38999999996 6899999885554 45553 249999999999999999999864 222
Q ss_pred CCC------cc--CCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhh
Q 001586 778 SPG------YI--GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGS 849 (1049)
Q Consensus 778 ~Pg------~~--GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~ 849 (1049)
..| .. .+|+.++ .|+++ +|..+|++++++++.+.+.... +. ...+ ++
T Consensus 232 ~~g~~~~~~~~~~~pdi~s~--sK~l~-----~G~rig~vv~~~~i~~~l~~~~---------~~-----~t~~----~~ 286 (403)
T PRK05093 232 RTGDLFAYMHYGVTPDILTS--AKALG-----GGFPIGAMLTTAEIASHFKVGT---------HG-----STYG----GN 286 (403)
T ss_pred CCccchhhhhcCCCCCEEEe--ccccc-----CCcceEEEEEcHHHHhhcCCCC---------CC-----CCCC----CC
Confidence 222 12 3676655 58774 4577999999888776653210 00 1111 23
Q ss_pred HHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc---CCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHH
Q 001586 850 ALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKR 926 (1049)
Q Consensus 850 ~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~---~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~ 926 (1049)
+..+.++.+.|..+-.+.+ .++...+.+++.++|+++ +.+...-+....+ +.+.+++ .......+++++
T Consensus 287 ~~~~~aa~a~L~~~~~~~~---~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~G~~--~~~~l~~---~~~~~~~~~~~~ 358 (403)
T PRK05093 287 PLACAVAEAVFDIINTPEV---LEGVKARRQRFVDGLQKINQKYGVFSEIRGMGLL--IGAELKP---QYKGRARDFLNA 358 (403)
T ss_pred HHHHHHHHHHHHHHhhccH---HHHHHHHHHHHHHHHHHHHhhCCCeEeEeeCceE--EEEEecC---cchhHHHHHHHH
Confidence 3334444554555533333 345556788899999875 2221110001111 2333321 000135688999
Q ss_pred HHHCCcccCCCCCCCCCEEEEEccCCCCHHHHHHHHHHHHHHHHH
Q 001586 927 LMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREE 971 (1049)
Q Consensus 927 L~~~Gi~~~~~~~p~~~~lri~~t~~~t~eeid~fv~aL~~i~~~ 971 (1049)
|.++|+.+.... .+.+|++|+...+++|||++++.|.+++..
T Consensus 359 l~~~Gv~v~~~g---~~~lRl~~~~~~~~~~i~~~~~~l~~~l~~ 400 (403)
T PRK05093 359 AAEEGVMVLVAG---PDVLRFAPSLVIEEADIDEGLARFEKAVAK 400 (403)
T ss_pred HHHCCeEEecCC---CCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 999998864221 378999999999999999999999987754
No 248
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.64 E-value=1.6e-14 Score=168.95 Aligned_cols=275 Identities=14% Similarity=0.103 Sum_probs=175.7
Q ss_pred HHHHHHHHhCCCCcceEeccchHHHHHHHHHHhhhc--------------------------cC--CCCEEEEcCCCC--
Q 001586 216 FQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQ--------------------------KG--KKKTFIIASNCH-- 265 (1049)
Q Consensus 216 ~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a~~~~--------------------------~~--~g~~Vlv~~~~H-- 265 (1049)
+.+.+.+|+|++.+|+-..+|.. |..++.+|+... ++ +||+|+.-+..|
T Consensus 100 ~~~ra~~lf~a~~anvqp~Sg~~-An~~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~GG 178 (493)
T PRK13580 100 AAEHAKELFGAEHAYVQPHSGAD-ANLVAFWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDSGG 178 (493)
T ss_pred HHHHHHHHhCCCcccccCCCcHH-HHHHHHHHHhcccccCcchhccccccccccchhhhhhhhccCCCCEEEeecCCCCC
Confidence 45778899999999987775554 445555554310 00 168888554433
Q ss_pred ------HHHHHHHHHhhcCCCeEEE--EeCcchhhc-cCCCEeEEEEEcCCCCeeeccHHHHHHHHHhCCcEEEEEeccc
Q 001586 266 ------PQTIDICITRADGFDIKVV--VSDLKDIDY-KSGDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLL 336 (1049)
Q Consensus 266 ------ps~~~~l~~~a~~~gi~v~--~v~~~~l~~-l~~~t~~V~v~~pn~~G~i~di~~I~~~ah~~galliV~a~~~ 336 (1049)
+.+.......+..+|++-. .+|++++++ +.+++..|++.+.+.+|.+.|+++|.++||++|++++|+ +.+
T Consensus 179 Hlthg~~~n~~~~~~~~~~y~vd~~~g~iD~d~l~~~~~~~~plvii~g~S~~~~~~dl~~i~eia~~~gA~L~VD-~AH 257 (493)
T PRK13580 179 HLTHGFRPNISGKMFHQRSYGVDPDTGLLDYDEIAALAREFKPLILVAGYSAYPRRVNFAKLREIADEVGAVLMVD-MAH 257 (493)
T ss_pred eeecCcccchhhheeeeEecccCcccCccCHHHHHHHHhhcCCEEEEeCccccCCCcCHHHHHHHHHHcCCEEEEE-Cch
Confidence 2223222122233444321 255667776 777888888877544466889999999999999999994 344
Q ss_pred cccCCC--------CCCcccceEEEecC-ccccccCCCCCCceEEEEEchhHHhcCCCceeeeeecCCCCcceeeecccc
Q 001586 337 ALTILK--------PPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTR 407 (1049)
Q Consensus 337 alg~l~--------~p~~~GaDivvgs~-k~lg~P~~~GGP~~G~l~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtr 407 (1049)
++|++. .| ..++||+++++ |+|+ ||..||+++++++.++|. . ..+ |..
T Consensus 258 ~~Gligg~~~~~~~~~-~~~~D~vtgT~hKaL~------GP~GG~I~~~~~l~~~L~---------~-a~P-~i~----- 314 (493)
T PRK13580 258 FAGLVAGKVFTGDEDP-VPHADIVTTTTHKTLR------GPRGGLVLAKKEYADAVD---------K-GCP-LVL----- 314 (493)
T ss_pred hhceeccccchhhcCC-CCCCcEEEeCChhhcc------CCCeEEEEecHHHHHHHh---------h-CCC-ccc-----
Confidence 555442 12 23899999998 7674 455689999998877661 0 001 100
Q ss_pred cccccccccCCCccchhHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEcC-CCCcceEEEecCC--
Q 001586 408 EQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQG-LPFFDTVKVKCAD-- 484 (1049)
Q Consensus 408 eq~irrekaTsni~t~~~l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~g~~~v~~-~~~~~~v~i~~~~-- 484 (1049)
+++.. +...|...++ ..+.....++.++++.+++++|++.|.+.| ++++. ....+.+.|.+.+
T Consensus 315 --------gg~l~---p~iAA~avAl--~e~~~~ef~~y~~~l~~Na~~La~~L~~~G-~~vv~ggTdshIV~V~lg~~~ 380 (493)
T PRK13580 315 --------GGPLP---HVMAAKAVAL--AEARTPEFQKYAQQVVDNARALAEGFLKRG-ARLVTGGTDNHLVLIDVTSFG 380 (493)
T ss_pred --------CCCcc---HHHHHHHHHH--HHHhCccHHHHHHHHHHHHHHHHHHHHhcC-CCccCCCCCCCEEEEEeCCHH
Confidence 11111 2222222222 222223457789999999999999999998 88863 2333556666654
Q ss_pred -H-HHHHHHHHHcCCeeeee----------cCCeEEEEeccCC----CHHHHHHHHHHHhC
Q 001586 485 -A-HAIASAAYKIEMNLRVV----------DSNTVTASFDETT----TLEDVDKLFIVFAG 529 (1049)
Q Consensus 485 -~-~~v~~~L~~~gI~~~~~----------~~~~vris~~~~~----t~edid~lv~aL~~ 529 (1049)
+ ..+.+.|.+.||.+... ....||++++..+ +++||+++++.|..
T Consensus 381 ~~g~~a~~~L~e~GI~vn~i~~Ptvp~g~~~~srLRIg~~A~ttrg~teedi~~iad~l~~ 441 (493)
T PRK13580 381 LTGRQAESALLDAGIVTNRNSIPSDPNGAWYTSGIRLGTPALTTLGMGSDEMDEVAELIVK 441 (493)
T ss_pred HHHHHHHHHHHHCCeEEccccCCCCCCCCCCCceEEeccchhhhcCCCHHHHHHHHHHHHH
Confidence 2 46777899999987532 1467999999944 69999999999963
No 249
>PRK09082 methionine aminotransferase; Validated
Probab=99.64 E-value=1.9e-14 Score=168.03 Aligned_cols=344 Identities=13% Similarity=0.163 Sum_probs=205.7
Q ss_pred HHHHHHHHhccccCcCccccccccccccCccccccccccCccc-ccCCCCCchhhhhcHHHHHHHHHHHHHHhhCCCc--
Q 001586 573 LLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSF-ANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDS-- 649 (1049)
Q Consensus 573 ~~~~l~~l~~~d~~~~~~~i~lGs~t~~~~~~~~~~~~~~~~f-~~~~P~~p~e~~~G~~~~i~el~~~la~l~G~~~-- 649 (1049)
+++.+..+.+++ .++.||.+....+............. ...+.|.+ .+|..++..++++++.+++|.+.
T Consensus 19 ~~~~~~~~~~~~-----~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~Y~~---~~G~~~lr~~~a~~l~~~~~~~~~~ 90 (386)
T PRK09082 19 IFTVMSALAAEH-----GAINLSQGFPDFDGPPYLVEALAYAMAAGHNQYPP---MTGVAALREAIAAKTARLYGRQYDA 90 (386)
T ss_pred HHHHHHHHHhhC-----CEEEecCCCCCCCCCHHHHHHHHHHHHcCCCCCCC---CCCcHHHHHHHHHHHHHHhCCCCCC
Confidence 556666655432 35677776554432212111100000 01223333 35777888889999998888753
Q ss_pred -cccccCc-hHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCEEEEEcCCC-CCCCCHHHHHHHHHh
Q 001586 650 -FSLQPNA-GAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA-KGNINIEELRKAAEA 726 (1049)
Q Consensus 650 -~~l~~~s-Ga~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~Vv~V~~d~-~g~iD~~~L~~~i~~ 726 (1049)
..+..++ +++|... +++.+. .++++|+++...|..+...++..|.+++.++.+. ++.+|+++++++++
T Consensus 91 ~~~i~~t~G~~~al~~---~~~~~~-----~~gd~Vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~- 161 (386)
T PRK09082 91 DSEITVTAGATEALFA---AILALV-----RPGDEVIVFDPSYDSYAPAIELAGGRAVRVALQPPDFRVDWQRFAAAIS- 161 (386)
T ss_pred CCcEEEeCCHHHHHHH---HHHHHc-----CCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCcccccCCHHHHHHhcC-
Confidence 1344444 4444433 333321 2568899998887777667888999999999964 47899999999996
Q ss_pred cCCCeEEEEEEcC-Ccccccc--ccHHHHHHHHHHcCCEEEEeccccccc-cC--cCC----CCccCCcEEEeCCCcccc
Q 001586 727 NRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQ-VG--LTS----PGYIGADVCHLNLHKTFC 796 (1049)
Q Consensus 727 ~~~~taaV~it~P-n~~G~i~--~di~eI~~lah~~G~ll~vD~A~~~a~-~g--l~~----Pg~~GaDi~~~s~hK~f~ 796 (1049)
+++++|++++| |.+|..- +++++|.++|+++|+++++|.++..-. .+ ..+ ++..+-.++..+++|.|+
T Consensus 162 --~~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~ 239 (386)
T PRK09082 162 --PRTRLIILNTPHNPSGTVWSAADMRALWQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPELRERAFVVSSFGKTYH 239 (386)
T ss_pred --ccceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCEEEEEehhhhhhccCCCCCCChhhCcCccCcEEEEeechhhcc
Confidence 68899999999 5689762 269999999999999999999863211 11 111 111223477778889885
Q ss_pred cCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHH
Q 001586 797 IPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAI 876 (1049)
Q Consensus 797 ~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~ 876 (1049)
+| |.++|++++++++...+-.. ......+.+...+. ++..++.. +++-+++..+...
T Consensus 240 ~~----G~RiG~iv~~~~l~~~~~~~--------------~~~~~~~~~~~~q~----~~~~~l~~-~~~~~~~~~~~~~ 296 (386)
T PRK09082 240 VT----GWKVGYCVAPAALSAEFRKV--------------HQYNTFTVNTPAQL----ALADYLRA-EPEHYLELPAFYQ 296 (386)
T ss_pred ch----hhhhhhhhCCHHHHHHHHHH--------------HhhhcCCCChHHHH----HHHHHHhC-ChHHHHHHHHHHH
Confidence 43 67789999887665432100 00001111111111 12233322 3444555555566
Q ss_pred HHHHHHHHHHhcc-CCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHH-HHCCcccCC-CCC---C-CCCEEEEEc
Q 001586 877 LNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRL-MDYGFHGPT-MSW---P-VPGTLMIEP 949 (1049)
Q Consensus 877 ~~a~yL~~~L~~~-~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L-~~~Gi~~~~-~~~---p-~~~~lri~~ 949 (1049)
++.+++.+.|++. +++. .+.+.++ +.++++.+ .+.+..++++.| .++|+.+.. -.| + ..+++|+++
T Consensus 297 ~~~~~~~~~L~~~~~~~~--~~~g~~~--~~~~~~~~---~~~~~~~~~~~l~~~~~v~v~pg~~f~~~~~~~~~~Ri~~ 369 (386)
T PRK09082 297 AKRDRFRAALANSRFKLL--PCEGTYF--QLVDYSAI---SDLDDVEFCQWLTREHGVAAIPLSVFYADPFPHRLVRLCF 369 (386)
T ss_pred HHHHHHHHHHHhCCCccc--CCCeeEE--EEEecccc---CCCCHHHHHHHHHHhCCEEEeCcHHhCCCCCCCCEEEEEe
Confidence 7788898988874 3321 1222221 33465421 135678899986 577997643 223 2 247899999
Q ss_pred cCCCCHHHHHHHHHHHHH
Q 001586 950 TESESKEELDRYCDALIS 967 (1049)
Q Consensus 950 t~~~t~eeid~fv~aL~~ 967 (1049)
.. +++++++.++.|++
T Consensus 370 ~~--~~~~l~~~~~rl~~ 385 (386)
T PRK09082 370 AK--QEETLDAAAERLCQ 385 (386)
T ss_pred cC--CHHHHHHHHHHHhh
Confidence 74 57778887777653
No 250
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.64 E-value=3.6e-14 Score=165.33 Aligned_cols=305 Identities=15% Similarity=0.116 Sum_probs=185.2
Q ss_pred HHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCEEEEEcCCC-CC
Q 001586 635 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA-KG 713 (1049)
Q Consensus 635 ~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~Vv~V~~d~-~g 713 (1049)
.++++.+++++|.+.. +..++|++|...++.++ +.+++++||+|...|......+...|++++.+++++ ++
T Consensus 32 ~~le~~la~~~g~~~~-v~~~sgt~al~~~l~al-------~~~~Gd~Viv~~~~~~~~~~~~~~~G~~~~~~~~~~~~~ 103 (380)
T TIGR03588 32 PAFEEALAEYVGAKYA-VAFNSATSALHIACLAL-------GVGPGDRVWTTPITFVATANCALYCGAKVDFVDIDPDTG 103 (380)
T ss_pred HHHHHHHHHHHCCCeE-EEEcCHHHHHHHHHHHc-------CCCCCCEEEeCCcchHHHHHHHHHcCCEEEEEecCCCcC
Confidence 4678899999998764 44556766554343332 123578999998766555556778999999999965 57
Q ss_pred CCCHHHHHHHHHhcC-CCeEEEEEEcCCccccccccHHHHHHHHHHcCCEEEEeccccccccCcCCCCccCC----cEEE
Q 001586 714 NINIEELRKAAEANR-DNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGA----DVCH 788 (1049)
Q Consensus 714 ~iD~~~L~~~i~~~~-~~taaV~it~Pn~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~Pg~~Ga----Di~~ 788 (1049)
.+|+++|++++++++ ++|++|+++++ +|... |+++|+++|+++|+++++|+++..+.. + ....+|. |+.+
T Consensus 104 ~~d~~~l~~~i~~~~~~~t~~v~~~~~--~G~~~-~~~~i~~l~~~~~~~lI~D~a~a~g~~-~-~~~~~g~~~~~d~~~ 178 (380)
T TIGR03588 104 NIDEDALEKKLAAAKGKLPKAIVPVDF--AGKSV-DMQAIAALAKKHGLKIIEDASHALGAE-Y-GGKPVGNCRYADATV 178 (380)
T ss_pred CcCHHHHHHHhhcccCCCceEEEEeCC--CCccC-CHHHHHHHHHHcCCEEEEECCCcccCc-c-CCEeCCCccccceEE
Confidence 899999999997321 36888887764 68776 799999999999999999999864332 2 1112344 9999
Q ss_pred eCCC--cccccCCCCCCCceeEEEEc-ccccccCCC-CccccCCCC---CC-----CCCCCCCCCCCccchhhHHHHHHH
Q 001586 789 LNLH--KTFCIPHGGGGPGMGPIGVK-KHLAPFLPS-HPVVSTGGI---PA-----PEKSQPLGTIAAAPWGSALILPIS 856 (1049)
Q Consensus 789 ~s~h--K~f~~P~g~GGPg~G~i~~~-~~l~~~lpg-~~vg~t~~~---~~-----~~~~~~t~~i~sa~~g~~~~~~~a 856 (1049)
+|+| |+++. +.+|++..+ +++.+.+.. +..|...+. .+ +..+....+... .-+.+.++.+
T Consensus 179 ~S~~~~K~~~~------~~GG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~n~--~m~~l~aa~g 250 (380)
T TIGR03588 179 FSFHPVKIITT------AEGGAVTTNDEELAERMRLLRSHGITKDPLLFEKQDEGPWYYEQQELGFNY--RMTDIQAALG 250 (380)
T ss_pred EecCCCCcccc------cCceEEEECCHHHHHHHHHHHHCCCCCCcccccccccCcceeeeecccccc--CccHHHHHHH
Confidence 9998 77742 233555554 444332210 000100000 00 000000000000 0011222222
Q ss_pred HHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc--CCeeeccCC-CceeeEEEEeccCccccCCCCHHHHHHHHHHCCcc
Q 001586 857 YTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPILFRGVN-GTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFH 933 (1049)
Q Consensus 857 ~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~--~~v~~~g~~-g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~ 933 (1049)
.+.| +.+.+..++..++++++.+.|+++ +.+...... ....+.+++.+.. ..+.+.+++.+.|.++||.
T Consensus 251 ~~qL-----~~l~~~~~~r~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~~---~~~~~r~~l~~~L~~~gI~ 322 (380)
T TIGR03588 251 LSQL-----KKLDRFVAKRREIAARYDRLLKDLPYFTPLTIPLGSKSAWHLYPILLDQ---EFGCTRKEVFEALRAAGIG 322 (380)
T ss_pred HHHH-----HHHHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCEeEEEEEEEEECC---cCCCCHHHHHHHHHHCCCC
Confidence 2222 235666777788999999999875 222211100 1122334444421 1245788999999999997
Q ss_pred cCCCCCCC----------------------CCEEEEEccCCCCHHHHHHHHHHHHHH
Q 001586 934 GPTMSWPV----------------------PGTLMIEPTESESKEELDRYCDALISI 968 (1049)
Q Consensus 934 ~~~~~~p~----------------------~~~lri~~t~~~t~eeid~fv~aL~~i 968 (1049)
++....|+ ...+.+.+....|++|+++++++|+++
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~dv~~i~~~l~~~ 379 (380)
T TIGR03588 323 VQVHYIPVHLQPYYRQGFGDGDLPSAENFYLAEISLPLHPALTLEQQQRVVETLRKV 379 (380)
T ss_pred cccCCcccccChhhhccCCcCCCcHHHHHHhceEEcCCCCCCCHHHHHHHHHHHHHh
Confidence 64221110 156788788888999999999999876
No 251
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.64 E-value=1.6e-14 Score=167.00 Aligned_cols=280 Identities=16% Similarity=0.207 Sum_probs=177.3
Q ss_pred HHHHHHHHHhhCCCcccccc-CchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCEEEEEcCCCCC
Q 001586 635 NNLGEWLCTITGFDSFSLQP-NAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKG 713 (1049)
Q Consensus 635 ~el~~~la~l~G~~~~~l~~-~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~Vv~V~~d~~g 713 (1049)
.++++.+++++|.+...+.. ++|+++- ...+++.+. .++++|+++...+..+...++..|++++.++.+.++
T Consensus 72 ~~lr~~ia~~~~~~~~~i~~~~~Ga~~~--i~~~~~~~~-----~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~ 144 (361)
T PRK00950 72 PELREALSKYTGVPVENIIVGGDGMDEV--IDTLMRTFI-----DPGDEVIIPTPTFSYYEISAKAHGAKPVYAKREEDF 144 (361)
T ss_pred HHHHHHHHHHhCCCHHHEEEeCCCHHHH--HHHHHHHhc-----CCCCEEEEcCCChHHHHHHHHHcCCEEEEeecCCCC
Confidence 47888899999987755544 5665432 222233321 246789988765444444577889999999987777
Q ss_pred CCCHHHHHHHHHhcCCCeEEEEEEcCC-ccccccccHHHHHHHHHHcCCEEEEeccccccccCcCCCC---ccCCcEEEe
Q 001586 714 NINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPG---YIGADVCHL 789 (1049)
Q Consensus 714 ~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~Pg---~~GaDi~~~ 789 (1049)
.+|+++|+++++ +++++|++++|+ .+|.+. +++++.++|+++|+++++|+++.. +.+-..+. ...--++..
T Consensus 145 ~~~~~~l~~~~~---~~~~~v~~~~p~nptG~~~-~~~~l~~l~~~~~~~li~De~y~~-~~~~~~~~~~~~~~~vi~~~ 219 (361)
T PRK00950 145 SLDVDSVLNAIT---EKTKVIFLCTPNNPTGNLI-PEEDIRKILESTDALVFVDEAYVE-FAEYDYTPLALEYDNLIIGR 219 (361)
T ss_pred CcCHHHHHHHhc---cCCCEEEEeCCCCCCCCCc-CHHHHHHHHHHCCcEEEEECchhh-hCccchHHHHHhcCCEEEEE
Confidence 899999999986 678889999995 599988 799999999999999999998632 11100000 111125566
Q ss_pred CCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhh-H
Q 001586 790 NLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG-L 868 (1049)
Q Consensus 790 s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eG-l 868 (1049)
+++|.|++| |-++|++.+++++...+-.. . ...+++ .....++..++. ..+ +
T Consensus 220 S~SK~~g~~----GlRiG~~~~~~~~~~~~~~~------------~--~~~~~~------~~~~~~a~~~l~---~~~~~ 272 (361)
T PRK00950 220 TFSKVFGLA----GLRIGYGFVPEWLIDYYMRA------------K--TPFSLT------RLSQAAAIAALS---DKEYI 272 (361)
T ss_pred eehHhhcCc----hhhcchhcCCHHHHHHHHHh------------c--CCCCCC------HHHHHHHHHHhc---CHHHH
Confidence 788887533 56689998887665432100 0 001111 111122223332 223 3
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHHHCCcccCC-CCCCC--CCEE
Q 001586 869 TEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPT-MSWPV--PGTL 945 (1049)
Q Consensus 869 ~~~~~~~~~~a~yL~~~L~~~~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~-~~~p~--~~~l 945 (1049)
.+..++...+.+++.+.|+ +.+ + .+.+. -+.++++ +.+..+++++|.++||.+.. ..|+. .+++
T Consensus 273 ~~~~~~~~~~r~~l~~~l~--~~~-~-~~~~~---~i~~~~~------~~~~~~~~~~l~~~gv~v~~~~~f~~~~~~~l 339 (361)
T PRK00950 273 EKSIEHGIKSREYLYNELP--FKV-Y-PSEAN---FVLVDVT------PMTAKEFCEELLKRGVIVRDCTSFRGLGDYYI 339 (361)
T ss_pred HHHHHHHHHHHHHHHhhcC--eeE-C-CCcce---EEEEECC------CCCHHHHHHHHHHCCEEEeeCCccCCCCCCeE
Confidence 4444444455566666665 232 2 11222 2445543 35788999999999998743 33432 4689
Q ss_pred EEEccCCCCHHHHHHHHHHHHHHH
Q 001586 946 MIEPTESESKEELDRYCDALISIR 969 (1049)
Q Consensus 946 ri~~t~~~t~eeid~fv~aL~~i~ 969 (1049)
|+++. +.+|+++++++|++++
T Consensus 340 Ris~~---~~~~~~~l~~~L~~il 360 (361)
T PRK00950 340 RVSIG---TFEENERFLEILKEIV 360 (361)
T ss_pred EEECC---CHHHHHHHHHHHHHHh
Confidence 99986 6789999999998874
No 252
>PRK07682 hypothetical protein; Validated
Probab=99.64 E-value=1.5e-14 Score=168.26 Aligned_cols=300 Identities=13% Similarity=0.145 Sum_probs=188.8
Q ss_pred hcHHHHHHHHHHHHHHhhCCCc--c-ccccC-chHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCE
Q 001586 628 QGYQEMFNNLGEWLCTITGFDS--F-SLQPN-AGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMK 703 (1049)
Q Consensus 628 ~G~~~~i~el~~~la~l~G~~~--~-~l~~~-sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~ 703 (1049)
+|..++...+.+++.+.+|.+. . .+..+ +++++...+ ++.+. .++++|+++...++.....+++.|.+
T Consensus 57 ~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~---~~~l~-----~~gd~vl~~~p~y~~~~~~~~~~g~~ 128 (378)
T PRK07682 57 AGLLELRQEIAKYLKKRFAVSYDPNDEIIVTVGASQALDVA---MRAII-----NPGDEVLIVEPSFVSYAPLVTLAGGV 128 (378)
T ss_pred CCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHH---HHHhC-----CCCCEEEEeCCCchhhHHHHHHcCCE
Confidence 5777777777777777666632 2 34444 444444333 33321 25688999888776666678889999
Q ss_pred EEEEcCCC--CCCCCHHHHHHHHHhcCCCeEEEEEEcCC-cccccc--ccHHHHHHHHHHcCCEEEEeccccccc-cC-c
Q 001586 704 IVSVGTDA--KGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQ-VG-L 776 (1049)
Q Consensus 704 Vv~V~~d~--~g~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~--~di~eI~~lah~~G~ll~vD~A~~~a~-~g-l 776 (1049)
++.++.+. ++.+|+++|++++. +++++|++++|+ .+|.+- +++++|+++|+++|+++++|.++..-. .+ .
T Consensus 129 ~~~~~~~~~~~~~~d~~~l~~~~~---~~~~~v~~~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~ 205 (378)
T PRK07682 129 PVPVATTLENEFKVQPAQIEAAIT---AKTKAILLCSPNNPTGAVLNKSELEEIAVIVEKHDLIVLSDEIYAELTYDEAY 205 (378)
T ss_pred EEEeecCCccCCCCCHHHHHhhcC---cccEEEEEECCCCCcCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhcccCCCC
Confidence 99998753 46899999999986 688999999994 688774 259999999999999999999854111 01 0
Q ss_pred CC----CCccCCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHH
Q 001586 777 TS----PGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALI 852 (1049)
Q Consensus 777 ~~----Pg~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~ 852 (1049)
.+ ++...-.+++.+++|+|++| |-++|++++++++...+-.. .. ....+.+...+
T Consensus 206 ~~~~~~~~~~~~~i~~~S~SK~~~~~----GlR~G~~~~~~~~i~~l~~~------------~~--~~~~~~~~~~q--- 264 (378)
T PRK07682 206 TSFASIKGMRERTILISGFSKGFAMT----GWRLGFIAAPVYFSEAMLKI------------HQ--YSMMCAPTMAQ--- 264 (378)
T ss_pred CChhhcccccCCEEEEecCcccccCh----hhhhhhhhcCHHHHHHHHHH------------HH--hhccCCCHHHH---
Confidence 00 11112357778889988544 56699999887766543210 00 01111111111
Q ss_pred HHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHH-HC
Q 001586 853 LPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-DY 930 (1049)
Q Consensus 853 ~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~-~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~-~~ 930 (1049)
.++..++. .|.+-+++..+...++.+++.+.|+++ +++ ..+.+.++ ++++++. .+.+..++++.|. ++
T Consensus 265 -~a~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~--~~p~g~~~--~~~~~~~----~~~~~~~~~~~ll~~~ 334 (378)
T PRK07682 265 -FAALEALR-AGNDDVIRMRDSYRKRRNFFVTSFNEIGLTC--HVPGGAFY--AFPSISS----TGLSSEEFAEQLLLEE 334 (378)
T ss_pred -HHHHHHHh-CChHHHHHHHHHHHHHHHHHHHHHHHCCCcc--CCCCeeEE--EEEeccC----CCCCHHHHHHHHHHhC
Confidence 12222332 233335555566677888999999875 332 22223221 2334321 1356788998876 68
Q ss_pred CcccC-CCCCC--CCCEEEEEccCCCCHHHHHHHHHHHHHHHHH
Q 001586 931 GFHGP-TMSWP--VPGTLMIEPTESESKEELDRYCDALISIREE 971 (1049)
Q Consensus 931 Gi~~~-~~~~p--~~~~lri~~t~~~t~eeid~fv~aL~~i~~~ 971 (1049)
|+.+. ...|. ..+++||+++. +.+++++.++.|++++++
T Consensus 335 gv~v~pg~~f~~~~~~~iRis~~~--~~~~l~~~l~~l~~~l~~ 376 (378)
T PRK07682 335 KVAVVPGSVFGESGEGFIRCSYAT--SLEQLQEAMKRMKRFVEN 376 (378)
T ss_pred CEEEcCchhhCcCCCCeEEEEeCC--CHHHHHHHHHHHHHHHhh
Confidence 99864 22232 25899999974 588999999999887654
No 253
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.64 E-value=1.2e-13 Score=163.15 Aligned_cols=372 Identities=15% Similarity=0.141 Sum_probs=220.3
Q ss_pred CCHHHHHHHHHHHhccccCcCccccccccccccCccccccccccCccccc----CCCCCchhhhhcHHHHHHHHHHHHHH
Q 001586 568 HTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFAN----IHPFAPADQAQGYQEMFNNLGEWLCT 643 (1049)
Q Consensus 568 ~se~e~~~~l~~l~~~d~~~~~~~i~lGs~t~~~~~~~~~~~~~~~~f~~----~~P~~p~e~~~G~~~~i~el~~~la~ 643 (1049)
+.|.++.+.+-.|.+....++++..+++-|..+++.....++. +++.. ...+. ...| ....++++.+++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~--~~~~a~~~~~~~~~---~~~G--~~~~~fe~~lA~ 74 (438)
T PRK15407 2 MTEEELRQQILELVREYAELAHAPKPFVPGKSPIPPSGKVIDA--KELQNLVDASLDFW---LTTG--RFNDAFEKKLAE 74 (438)
T ss_pred ccHHHHHHHHHHHHHHHHHHhcccccccCCCCCCCcCccCCCH--HHHHHHHHHHHhCc---ccCC--hhHHHHHHHHHH
Confidence 5678888888888776666666666676666555433322210 11100 00000 0112 235688999999
Q ss_pred hhCCCccccccCchHHHHHHHHHHHHH-HHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCEEEEEcCCC-CCCCCHHHHH
Q 001586 644 ITGFDSFSLQPNAGAAGEYAGLMVIRA-YHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA-KGNINIEELR 721 (1049)
Q Consensus 644 l~G~~~~~l~~~sGa~ge~a~l~air~-y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~Vv~V~~d~-~g~iD~~~L~ 721 (1049)
++|.+.+ +..++|++|...++.++.. +....+.+++++||++...|......+...|++++.++++. ++.+|+++++
T Consensus 75 ~~g~~~~-v~~~sGt~al~~aL~al~~~~~~~~~~~pGd~VIv~~~t~~a~~~~v~~~G~~pv~vdvd~~~~~id~~~le 153 (438)
T PRK15407 75 FLGVRYA-LLVNSGSSANLLAFSALTSPKLGDRALKPGDEVITVAAGFPTTVNPIIQNGLVPVFVDVELPTYNIDASLLE 153 (438)
T ss_pred HhCCCeE-EEECCHHHHHHHHHHHHhhccccccCCCCCCEEEECCCCcHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHH
Confidence 9998764 5677888777555554321 00011334678999998877666666778999999999874 5889999999
Q ss_pred HHHHhcCCCeEEEEEEcCCccccccccHHHHHHHHHHcCCEEEEeccccccccCc-CCCCccCCcEEEeCCCcccccCCC
Q 001586 722 KAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGL-TSPGYIGADVCHLNLHKTFCIPHG 800 (1049)
Q Consensus 722 ~~i~~~~~~taaV~it~Pn~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl-~~Pg~~GaDi~~~s~hK~f~~P~g 800 (1049)
++++ ++|++|+++++ +|... |+++|.++|+++|++|++|+|+..+..-- ...|.+| |+.++|+|..-.++
T Consensus 154 ~~i~---~~tkaVi~~~~--~G~p~-dl~~I~~la~~~gi~vIeDaa~a~G~~~~g~~~G~~g-d~~~fSf~~~k~~~-- 224 (438)
T PRK15407 154 AAVS---PKTKAIMIAHT--LGNPF-DLAAVKAFCDKHNLWLIEDNCDALGSTYDGRMTGTFG-DIATLSFYPAHHIT-- 224 (438)
T ss_pred HHcC---cCCeEEEEeCC--CCChh-hHHHHHHHHHHCCCEEEEECccchhhhcCCeeeeccC-ceEEEeCCCCCCcc--
Confidence 9997 78999999875 46665 79999999999999999999975433211 1346676 99999987643322
Q ss_pred CCCCceeEEEEccc-ccccCCC-CccccC------CCC--C----------CCC--CCC---CCC-CCCccchhhHHHHH
Q 001586 801 GGGPGMGPIGVKKH-LAPFLPS-HPVVST------GGI--P----------APE--KSQ---PLG-TIAAAPWGSALILP 854 (1049)
Q Consensus 801 ~GGPg~G~i~~~~~-l~~~lpg-~~vg~t------~~~--~----------~~~--~~~---~t~-~i~sa~~g~~~~~~ 854 (1049)
.|.| |++++++. +...+.- +..|.. .+. . ..+ ... ..+ |..- +-+.++
T Consensus 225 -~geG-G~l~t~d~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~rm----sel~AA 298 (438)
T PRK15407 225 -MGEG-GAVFTNDPLLKKIIESFRDWGRDCWCAPGCDNTCGKRFGWQLGELPFGYDHKYTYSHLGYNLKI----TDMQAA 298 (438)
T ss_pred -ccCc-eEEEECCHHHHHHHHHHHHhCcccccccccccccccccccccccccccccccccccccccccCc----cHHHHH
Confidence 2444 88888853 3322110 000100 000 0 000 000 000 1010 223333
Q ss_pred HHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhccCC-eeecc-CC--CceeeEEEEeccCccccCCCCHHHHHHHHHHC
Q 001586 855 ISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYP-ILFRG-VN--GTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDY 930 (1049)
Q Consensus 855 ~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~~~-v~~~g-~~--g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~ 930 (1049)
++..-|.. +.+..++..+++.++.+.|+++.. +..+. +. .+..+.|.+.++. ..+.+.+++.+.|.++
T Consensus 299 ig~~qL~~-----l~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~i~~~~---~~~~~Rd~l~~~L~~~ 370 (438)
T PRK15407 299 IGLAQLEK-----LPGFIEARKANFAYLKEGLASLEDFLILPEATPNSDPSWFGFPITVKE---DAGFTRVELVKYLEEN 370 (438)
T ss_pred HHHHHHHH-----HHHHHHHHHHHHHHHHHHhccCCCccccCcCCCCCeeEEEEEEEEECC---cCCCCHHHHHHHHHHC
Confidence 34444333 445556666788888899976421 21211 11 1233445555431 1235678999999999
Q ss_pred CcccCCCC--------------------CCC-----CCEEEEEccCCCCHHHHHHHHHHHHHHHH
Q 001586 931 GFHGPTMS--------------------WPV-----PGTLMIEPTESESKEELDRYCDALISIRE 970 (1049)
Q Consensus 931 Gi~~~~~~--------------------~p~-----~~~lri~~t~~~t~eeid~fv~aL~~i~~ 970 (1049)
||.+.... +|. ...+.+-+...-|++|+++.+++|+++.+
T Consensus 371 GI~~~~~~~~~~~~~p~~~~~~~~~~~~~P~ae~~~~~~l~LP~~~~l~~~~v~~i~~~i~~~~~ 435 (438)
T PRK15407 371 KIGTRLLFAGNLTRQPYFKGVKYRVVGELTNTDRIMNDTFWIGVYPGLTEEMLDYVIEKIEEFFG 435 (438)
T ss_pred CCCccccCCCccccChhhhhcCCCCCCCChHHHHHHhCeEEecCCCCCCHHHHHHHHHHHHHHHh
Confidence 99653111 110 12345544555689999999999998764
No 254
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.64 E-value=6.9e-14 Score=164.48 Aligned_cols=294 Identities=20% Similarity=0.239 Sum_probs=185.9
Q ss_pred HHHHHHHHHHHHhhCCCc-cccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEE-cCCCCCccHHHHHhcC--------
Q 001586 632 EMFNNLGEWLCTITGFDS-FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCII-PVSAHGTNPATAAMCG-------- 701 (1049)
Q Consensus 632 ~~i~el~~~la~l~G~~~-~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLi-p~saHg~~pa~a~~~G-------- 701 (1049)
+...++++.+++++|.+. ..+..++|++++++++.+++.+ .++++|++ ..+.||.........+
T Consensus 79 ~~~~~l~~~l~~~~~~~~~~v~~~~sgsea~~~al~~~~~~------~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~ 152 (413)
T cd00610 79 EPAVELAELLLALTPEGLDKVFFVNSGTEAVEAALKLARAY------TGRKKIISFEGAYHGRTLGALSLTGSKKYRGGF 152 (413)
T ss_pred HHHHHHHHHHHHhCCCCCCEEEEcCcHHHHHHHHHHHHHHH------cCCCeEEEECCCcCCccHHHHHhcCCccccccC
Confidence 456689999999998432 2466789999888887777654 13566665 4578887665544322
Q ss_pred ----CEEEEEcCCCC------CCCCHHHHHHHHHhcCCCeEEEEEEcCC-cccccccc----HHHHHHHHHHcCCEEEEe
Q 001586 702 ----MKIVSVGTDAK------GNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEG----IDEICKIIHDNGGQVYMD 766 (1049)
Q Consensus 702 ----~~Vv~V~~d~~------g~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~~d----i~eI~~lah~~G~ll~vD 766 (1049)
.+++.+|.+.. ...|+++|+++++++.+++++|+++..+ ..|.+. + +++|.++|+++|+++++|
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~vi~~p~~~~~G~~~-~~~~~l~~l~~l~~~~~~~li~D 231 (413)
T cd00610 153 GPLLPGVLHVPYPYRYRPPAELADDLEALEEALEEHPEEVAAVIVEPIQGEGGVIV-PPPGYLKALRELCRKHGILLIAD 231 (413)
T ss_pred CCCCCCcEEeCCCccccchhhHHHHHHHHHHHHhcCCCCEEEEEEccccCCCCCcc-CCHHHHHHHHHHHHHcCCEEEEe
Confidence 34667776522 2348999999998654577777766544 468765 3 999999999999999999
Q ss_pred ccccccccCcCCCC--------ccCCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCC
Q 001586 767 GANMNAQVGLTSPG--------YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQP 838 (1049)
Q Consensus 767 ~A~~~a~~gl~~Pg--------~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~ 838 (1049)
+++. ++.+.| ...+|++++ .|+|+ +|-++|+++.++++...++.... . .
T Consensus 232 ev~~----g~g~~g~~~~~~~~~~~~d~~t~--sK~l~-----~g~~~g~~~~~~~~~~~~~~~~~----------~--~ 288 (413)
T cd00610 232 EVQT----GFGRTGKMFAFEHFGVEPDIVTL--GKGLG-----GGLPLGAVLGREEIMDAFPAGPG----------L--H 288 (413)
T ss_pred cccc----CCCcCcchhhHhhcCCCCCeEEE--ccccc-----CccccEEEEEcHHHHHhhccCCC----------C--C
Confidence 9854 222221 123577655 48874 34568888888877766511100 0 0
Q ss_pred CCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc---CCeeecc-CCCceeeEEEEeccCccc
Q 001586 839 LGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPILFRG-VNGTVAHEFIVDLRGLKN 914 (1049)
Q Consensus 839 t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~---~~v~~~g-~~g~~~~e~iv~~~~~~~ 914 (1049)
.+..+ +++..++++.+.+..+..+. ..++...+.+++.++|++. +.+.... ..+.. +.+.+..-..
T Consensus 289 ~~t~~----~~~~~~~a~~a~l~~l~~~~---~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~---~~~~~~~~~~ 358 (413)
T cd00610 289 GGTFG----GNPLACAAALAVLEVLEEEG---LLENAAELGEYLRERLRELAEKHPLVGDVRGRGLM---IGIELVKDRA 358 (413)
T ss_pred CCCCC----cCHHHHHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHHHHhhCCcEEEeecCceE---EEEEEecCCC
Confidence 01111 23344455666677665543 3455667788888888765 1322111 11222 2333321000
Q ss_pred ---cCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEccCCCCHHHHHHHHHHHHHH
Q 001586 915 ---TAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISI 968 (1049)
Q Consensus 915 ---~~g~~~~~v~k~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~eeid~fv~aL~~i 968 (1049)
........+.+.|.++|+.+.... .+.+|++++..+|++|||+++++|+++
T Consensus 359 ~~~~~~~~~~~~~~~l~~~gv~v~~~~---~~~lR~~~~~~~t~~~i~~~~~~l~~~ 412 (413)
T cd00610 359 TKPPDKELAAKIIKAALERGLLLRPSG---GNVIRLLPPLIITEEEIDEGLDALDEA 412 (413)
T ss_pred cCCcchHHHHHHHHHHHHCCeEEeecC---CCEEEEECCCcCCHHHHHHHHHHHHHh
Confidence 000235678899999999875332 478999999999999999999999865
No 255
>PRK06062 hypothetical protein; Provisional
Probab=99.64 E-value=8.4e-14 Score=165.23 Aligned_cols=298 Identities=15% Similarity=0.160 Sum_probs=188.3
Q ss_pred HHHHHHHHHHhhCC--CccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEE-EcCCCCCccHHHHHhcCC--------
Q 001586 634 FNNLGEWLCTITGF--DSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGM-------- 702 (1049)
Q Consensus 634 i~el~~~la~l~G~--~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VL-ip~saHg~~pa~a~~~G~-------- 702 (1049)
..++.+.|++++.. +. .++.+||+++++++++.+|.| . +|++|| ...+.||....+....|-
T Consensus 97 ~~~lae~L~~~~p~~~~~-v~f~~SGsEAve~AlklAr~~---t---gr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~ 169 (451)
T PRK06062 97 RSEAARLIAERAPGDLSK-VFFTNGGADANEHAVRMARLH---T---GRPKVLSAYRSYHGGTGSAINLTGDPRRWPNDT 169 (451)
T ss_pred HHHHHHHHHHhCCCCCCE-EEEcCChHHHHHHHHHHHHHh---h---CCceEEEEeCCCCCCCHHHHhhcCCcccccCCC
Confidence 44788889998753 33 477899999999999999887 2 355666 677899987666443221
Q ss_pred ---EEEEEcCCCCCC------CC-------HHHHHHHHHhc-CCCeEEEEEEcC-Cccccccc---cHHHHHHHHHHcCC
Q 001586 703 ---KIVSVGTDAKGN------IN-------IEELRKAAEAN-RDNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGG 761 (1049)
Q Consensus 703 ---~Vv~V~~d~~g~------iD-------~~~L~~~i~~~-~~~taaV~it~P-n~~G~i~~---di~eI~~lah~~G~ 761 (1049)
.+..++.....+ .| +++|+++++++ .+++++|+++.. +..|++.+ .+++|.++|+++|+
T Consensus 170 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~ 249 (451)
T PRK06062 170 GRAGVVHFFGPFLYRSEFHATTEEEECERALAHLERVIELEGPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGI 249 (451)
T ss_pred CCCCCEEeCCCCccccccCCCChHHHHHHHHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCC
Confidence 123332211111 13 78889988754 267888888754 34677752 39999999999999
Q ss_pred EEEEeccccccccCcCCCCcc--------CCcEEEeCCCcccccCCCCCC-CceeEEEEcccccccCCCCccccCCCCCC
Q 001586 762 QVYMDGANMNAQVGLTSPGYI--------GADVCHLNLHKTFCIPHGGGG-PGMGPIGVKKHLAPFLPSHPVVSTGGIPA 832 (1049)
Q Consensus 762 ll~vD~A~~~a~~gl~~Pg~~--------GaDi~~~s~hK~f~~P~g~GG-Pg~G~i~~~~~l~~~lpg~~vg~t~~~~~ 832 (1049)
++++|++ +.|+.+.|.+ -+|++++ .|.++ +|- |- |.+.+++++++.+.....
T Consensus 250 lLI~DEV----~tGfGRtG~~~a~~~~gv~PDi~t~--gK~lg----gG~~Pi-gav~~~~~i~~~~~~~~~-------- 310 (451)
T PRK06062 250 VLIADEV----MAGFGRTGKWFAIEHFGVVPDLITF--AKGVN----SGYVPL-GGVAISEAIAATFADRPY-------- 310 (451)
T ss_pred EEEeecc----ccCCCcCcHHHHHHhcCCCCCeeee--chhhh----cCCcCc-EEEEEcHHHHHHhccCCC--------
Confidence 9999997 4556566532 4688877 47663 332 54 445556666655421100
Q ss_pred CCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHH-HHHHHHHhcc---CCee--eccCCCceeeEEE
Q 001586 833 PEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNA-NYMAKRLEKH---YPIL--FRGVNGTVAHEFI 906 (1049)
Q Consensus 833 ~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a-~yL~~~L~~~---~~v~--~~g~~g~~~~e~i 906 (1049)
..+ +++.|+++.++++.+.|..+..+++.+. ..+.. .+|.++|+++ +.++ ..|. |. +..+-
T Consensus 311 -----~~~---~T~~gnpl~~Aaa~a~L~~l~~~~l~~~---~~~~G~~~l~~~L~~l~~~~~~v~~vrG~-Gl-~~gve 377 (451)
T PRK06062 311 -----PGG---LTYSGHPLACAAAVATINAMEEEGIVEN---AARIGAEVLGPGLRELAERHPSVGEVRGL-GV-FWALE 377 (451)
T ss_pred -----CCC---CCCCCCHHHHHHHHHHHHHHHhcCHHHH---HHHHHHHHHHHHHHHHHhcCCcEEeEecc-cc-EEEEE
Confidence 001 1234567778888899988877765543 33454 4777777764 3321 2221 32 22222
Q ss_pred EeccCcccc--CCC-----CHHHHHHHHHHCCcccCCCCCCCCCEEEEEccCCCCHHHHHHHHHHHHHHHHHHHH
Q 001586 907 VDLRGLKNT--AGI-----EPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQ 974 (1049)
Q Consensus 907 v~~~~~~~~--~g~-----~~~~v~k~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~eeid~fv~aL~~i~~~i~~ 974 (1049)
+..+.-.+. ... ....+.+.|.++|+.+.. ..+.+|++|+..+|++|||++++++.+++++++.
T Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gvl~~~----~~~~lrl~ppl~~t~~eid~~~~~l~~~l~~~~~ 448 (451)
T PRK06062 378 LVADRETREPLAPYGASSAAMAAVKAACKERGLLPFV----NGNRIHVVPPCTVTEDEVREGLAILDAALAVADA 448 (451)
T ss_pred EcccccccCCCcccchhhHHHHHHHHHHHHCCcEEee----cCCEEEEECCccCCHHHHHHHHHHHHHHHHHhhh
Confidence 211100000 000 134688889999998642 2478999999999999999999999999877654
No 256
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.64 E-value=2.5e-14 Score=163.79 Aligned_cols=288 Identities=17% Similarity=0.233 Sum_probs=191.9
Q ss_pred cHHHHHHHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCEEEEEc
Q 001586 629 GYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVG 708 (1049)
Q Consensus 629 G~~~~i~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~Vv~V~ 708 (1049)
|..+...++++.|++++|.+.+ +..+||=.++.+.+-++. ++++.|+...-.|.+--..++..+.+++..+
T Consensus 81 G~~~~h~~LE~~lA~f~g~e~a-l~f~SGy~AN~~~i~~l~--------~~~dli~~D~lnHASiidG~rls~a~~~~f~ 151 (388)
T COG0156 81 GTSDLHVELEEELADFLGAEAA-LLFSSGFVANLGLLSALL--------KKGDLIFSDELNHASIIDGIRLSRAEVRRFK 151 (388)
T ss_pred CCcHHHHHHHHHHHHHhCCCcE-EEEcccchhHHHHHHHhc--------CCCcEEEEechhhhhHHHHHHhCCCcEEEec
Confidence 5566778999999999999875 556677777766655543 2467777777667665556788899998888
Q ss_pred CCCCCCCCHHHHHHHHHhcCC---CeEEEEEEcC-CccccccccHHHHHHHHHHcCCEEEEeccccccccCcCCCC----
Q 001586 709 TDAKGNINIEELRKAAEANRD---NLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPG---- 780 (1049)
Q Consensus 709 ~d~~g~iD~~~L~~~i~~~~~---~taaV~it~P-n~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~Pg---- 780 (1049)
- .|+++|++++++... +-+.|++... +..|.+- |+++|++++++||++++||.||..+..| .-|
T Consensus 152 H-----nD~~~Le~~l~~~~~~~~~~~~IvtegVfSMdGdiA-pL~~l~~L~~ky~a~L~VDEAHa~Gv~G--~~GrG~~ 223 (388)
T COG0156 152 H-----NDLDHLEALLEEARENGARRKLIVTEGVFSMDGDIA-PLPELVELAEKYGALLYVDEAHAVGVLG--PNGRGLA 223 (388)
T ss_pred C-----CCHHHHHHHHHhhhccCCCceEEEEeccccCCCCcC-CHHHHHHHHHHhCcEEEEEccccccccC--CCCccHH
Confidence 6 699999999986321 2355555544 6689887 7999999999999999999998644433 221
Q ss_pred -ccC-----CcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHH
Q 001586 781 -YIG-----ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILP 854 (1049)
Q Consensus 781 -~~G-----aDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~ 854 (1049)
..| .||+++++.|.|+ -..|+++++..+..++-.+. +..-.++ +- .+..++
T Consensus 224 e~~g~~~~~vdi~~gTlsKAlG-------s~Gg~v~g~~~~~d~L~~~a-----------r~~ifSt-al----pP~~aa 280 (388)
T COG0156 224 EHFGLEPEEVDIIVGTLGKALG-------SSGGYIAGSAALIDYLRNRA-----------RPFIFST-AL----PPAVAA 280 (388)
T ss_pred HHhCCCCccceEEEEEchhhhc-------ccCceeeCcHHHHHHHHHhC-----------CceeccC-CC----CHHHHH
Confidence 122 3799999999885 22378888877666553211 1000010 11 123334
Q ss_pred HHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHHHCCcc
Q 001586 855 ISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFH 933 (1049)
Q Consensus 855 ~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~-~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~ 933 (1049)
++...+..+-.. .+..++...++.+++..++.. +.+. +...+. ..+++.. ...+..++..|.++||.
T Consensus 281 a~~~al~~l~~~--~~~r~~L~~~~~~~~~~~~~~~~~~~--~s~s~I-~pv~~gd-------~~~a~~~s~~l~~~Gi~ 348 (388)
T COG0156 281 AALAALRILEEG--PERRERLQELAAFFRSLLKALGLVLL--PSESPI-IPVILGD-------EERALEASRALLEEGIY 348 (388)
T ss_pred HHHHHHHHHHhC--HHHHHHHHHHHHHHHHHHHhcCCccC--CCCCCe-eeeEeCC-------HHHHHHHHHHHHHCCee
Confidence 455556665432 234455667788888666553 3331 111122 1223321 12367888999999999
Q ss_pred cCCCCCC-CC---CEEEEEccCCCCHHHHHHHHHHHHHH
Q 001586 934 GPTMSWP-VP---GTLMIEPTESESKEELDRYCDALISI 968 (1049)
Q Consensus 934 ~~~~~~p-~~---~~lri~~t~~~t~eeid~fv~aL~~i 968 (1049)
+....+| ++ ..||+++|..+|++|||+++++|.++
T Consensus 349 v~~i~~PTVp~gtarlRi~lta~ht~~~I~~l~~~l~~~ 387 (388)
T COG0156 349 VSAIRPPTVPKGTARLRITLTAAHTEEDIDRLAEALSEV 387 (388)
T ss_pred EeeecCCCCCCCcceEEEEecCCCCHHHHHHHHHHHHhh
Confidence 8777666 32 67999999999999999999999764
No 257
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.64 E-value=8.3e-15 Score=170.13 Aligned_cols=279 Identities=19% Similarity=0.187 Sum_probs=181.7
Q ss_pred HHHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHH----HHhcCCEEEEEcC
Q 001586 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGT 709 (1049)
Q Consensus 634 i~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~----a~~~G~~Vv~V~~ 709 (1049)
..++++.++++.|.+.+ +..++|.++...+++++. +++++|+++...|+..... ....|++++.++.
T Consensus 55 ~~~Le~~lA~leg~e~i-vvt~gg~~Ai~~~l~all--------~~Gd~Il~~~~~y~~~~~~~~~~~~~~gi~v~~vd~ 125 (388)
T PRK08861 55 RGLLEQTLSELESGKGA-VVTNCGTSALNLWVSALL--------GPDDLIVAPHDCYGGTYRLFNTRANKGDFKVQFVDQ 125 (388)
T ss_pred HHHHHHHHHHHhCCCeE-EEECCHHHHHHHHHHHHc--------CCCCEEEEcCCchHHHHHHHHHHHhcCCeEEEEECC
Confidence 44788999999997654 556677766654444331 2578899987766643322 2345788888864
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-ccccccccHHHHHHHHHHcCCEEEEeccccccccCcCCCCccCCcEEE
Q 001586 710 DAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1049)
Q Consensus 710 d~~g~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~Pg~~GaDi~~ 788 (1049)
.|+++++++++ ++|++|++++|+ .+|.+. |+++|+++||++|+++++|.++.. +.+..|-++|+|+++
T Consensus 126 -----~d~e~l~~~i~---~~tklV~lesP~NPtG~v~-dl~~I~~la~~~gi~vIvDea~~~--~~~~~pl~~GaDivv 194 (388)
T PRK08861 126 -----SDAAALDAALA---KKPKLILLETPSNPLVRVV-DIAELCQKAKAVGALVAVDNTFLT--PVLQKPLELGADFVI 194 (388)
T ss_pred -----CCHHHHHHhcC---cCCeEEEEECCCCCCCccc-CHHHHHHHHHHcCCEEEEECCccc--cccCCCcccCCCEEE
Confidence 58999999997 789999999995 689887 799999999999999999998643 234578889999999
Q ss_pred eCCCcccccCCCCCCCc---eeEEEEcc-cccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHc
Q 001586 789 LNLHKTFCIPHGGGGPG---MGPIGVKK-HLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMG 864 (1049)
Q Consensus 789 ~s~hK~f~~P~g~GGPg---~G~i~~~~-~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG 864 (1049)
.|+||+++ ||+ .|++++++ .+.+.+.. . + ..++...+ |+ -+|+...|
T Consensus 195 ~S~tK~l~------G~~d~~gG~i~~~~~~~~~~~~~----~--------~-~~~G~~~~-p~---------~a~l~~rg 245 (388)
T PRK08861 195 HSTTKYIN------GHSDVIGGVLITKTKEHAEELAW----W--------G-NCIGATGT-PF---------DSYMTLRG 245 (388)
T ss_pred eecceecc------CCCcceeEEEEecHHHHHHHHHH----H--------H-hccCCCCC-hH---------HHHHHHhc
Confidence 99999994 443 57777754 33332210 0 0 11122211 22 24466778
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhccC---CeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHHHCCcccCCCCCCC
Q 001586 865 SKGLTEASKIAILNANYMAKRLEKHY---PILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPV 941 (1049)
Q Consensus 865 ~eGl~~~~~~~~~~a~yL~~~L~~~~---~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~p~ 941 (1049)
-+-|.-+.++..++|..+++.|+++. +|.|+|-. ..+..+++++.. .|+
T Consensus 246 l~Tl~lR~~~~~~~a~~~a~~L~~~p~v~~V~yP~l~------------------~~p~~~~~~~~~-~g~--------- 297 (388)
T PRK08861 246 IRTLGARMRVHEESAQQILAYLQTQSLVGTIYHPSLP------------------EHPGHEIAKKQQ-SGF--------- 297 (388)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCC------------------CCchHHHHHHhC-CCC---------
Confidence 88888889999999999999999873 34444310 123355665532 221
Q ss_pred CCEEEEEccCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCccccccch
Q 001586 942 PGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKVTCLFLHHGY 998 (1049)
Q Consensus 942 ~~~lri~~t~~~t~eeid~fv~aL~~i~~~i~~i~~g~~~~~~~~l~~~ph~~~~~~ 998 (1049)
++.+-|.+. .+.+++.+|++.|+-+. ...++ | +.+.|...|..+.+++
T Consensus 298 gg~~sf~~~--~~~~~~~~f~~~l~l~~-~~~s~--G----~~~sl~~~p~~~~h~~ 345 (388)
T PRK08861 298 GSMLSFEFA--GSFEQLKVFVKALALFS-LAESL--G----GVESLICHPASMTHRA 345 (388)
T ss_pred CceEEEEeC--CCHHHHHHHHhcCCcce-EccCC--C----CCcceeeCCCcccccc
Confidence 243444442 35677888888877322 11121 2 4555555555555543
No 258
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.64 E-value=3.4e-14 Score=165.42 Aligned_cols=213 Identities=25% Similarity=0.279 Sum_probs=155.0
Q ss_pred HHHHHHHHHHHhCCCCcceEeccchHHHHHHHHHHhhhccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCcch--
Q 001586 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKD-- 290 (1049)
Q Consensus 213 l~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a~~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~~~~-- 290 (1049)
..++++.++++.|.+. +.++.+|++++.++++++ .. +||+||+++..|+.+...+...++..|++++++|.++
T Consensus 56 ~~~le~~la~l~g~~~--~~~~~sG~~Ai~~al~al-~~--~Gd~Vl~~~~~~~~t~~~~~~~~~~~g~~v~~v~~~d~~ 130 (380)
T TIGR01325 56 VAAFEERIAALEGAER--AVATATGMSAIQAALMTL-LQ--AGDHVVASRSLFGSTVGFISEILPRFGIEVSFVDPTDLN 130 (380)
T ss_pred HHHHHHHHHHHhCCCc--EEEECCHHHHHHHHHHHH-hC--CCCEEEEecCCcchHHHHHHHHHHHhCCEEEEECCCCHH
Confidence 4557789999999864 667899999888877665 23 7899999999999888877776778899999998754
Q ss_pred -hhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCCC
Q 001586 291 -IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYG 366 (1049)
Q Consensus 291 -l~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~p~~~GaDivvgs~-k~lg~P~~~G 366 (1049)
+++ +++++++|++++| |++|.+.|+++|+++||++|++++|+ +..+.+....|.++|+||++.|. |.|+++ |
T Consensus 131 ~l~~~i~~~tklV~le~p~np~g~~~dl~~I~~la~~~gi~livD-~a~~~~~~~~pl~~g~Divv~S~sK~l~g~---g 206 (380)
T TIGR01325 131 AWEAAVKPNTKLVFVETPSNPLGELVDIAALAELAHAIGALLVVD-NVFATPVLQQPLKLGADVVVYSATKHIDGQ---G 206 (380)
T ss_pred HHHHhcCCCceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEE-CCCcccccCCchhhCCCEEEeeccceecCC---C
Confidence 444 7788999999998 68999999999999999999999994 34454445566789999999998 777532 1
Q ss_pred CCceEEEEEchhHHhcCCCceeeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcchHHHH
Q 001586 367 GPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTI 446 (1049)
Q Consensus 367 GP~~G~l~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irrekaTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i 446 (1049)
-.-+|++..++++.+.+- ..++..++ +.++.. + ++...+.+-++..
T Consensus 207 ~~~gG~vv~~~~~~~~l~-------------------------~~~~~~g~----~~~p~~---a--~~~l~~l~tl~~r 252 (380)
T TIGR01325 207 RVMGGVIAGSEELMAEVA-------------------------VYLRHTGP----AMSPFN---A--WVLLKGLETLSLR 252 (380)
T ss_pred CeEEEEEEeCHHHHHHHH-------------------------HHHHhhCC----CCCHHH---H--HHHHhccCcHHHH
Confidence 123477777776654431 00111111 112221 1 2244556667777
Q ss_pred HHHHHHHHHHHHHHhhcCCCeE
Q 001586 447 AQRVHGLAGTFALGLKKLGTVE 468 (1049)
Q Consensus 447 a~~~~~~a~~l~~~L~~~g~~~ 468 (1049)
.++..+++.++++.|+++++++
T Consensus 253 ~~~~~~~a~~la~~L~~~p~v~ 274 (380)
T TIGR01325 253 MQKQFDSALAIAEWLQAQPQVQ 274 (380)
T ss_pred HHHHHHHHHHHHHHHHcCCCcc
Confidence 7888899999999999886454
No 259
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.64 E-value=4.4e-14 Score=165.71 Aligned_cols=277 Identities=14% Similarity=0.120 Sum_probs=173.8
Q ss_pred HHHHH-HHHHHHHHhCCCCcceEeccchHHHHHHHHHHhhhccCCCCEEEEcCCCCHHHHHHHHH-hhcCCCeEEEEeC-
Q 001586 211 ESLLN-FQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICIT-RADGFDIKVVVSD- 287 (1049)
Q Consensus 211 e~l~e-~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a~~~~~~~g~~Vlv~~~~Hps~~~~l~~-~a~~~gi~v~~v~- 287 (1049)
+.+.+ .++.+++++|.+.+++.. .+||.+..+++.++ . ++||+|+++...|+.+...+.. .++..|.+++.++
T Consensus 64 ~~l~~~~~~~~~~~~g~~~~~v~~-~sgt~a~~~~l~~l-~--~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 139 (402)
T cd00378 64 DEIEDLAIERAKKLFGAEYANVQP-HSGSQANLAVYFAL-L--EPGDTIMGLDLSHGGHLTHGSFTKVSASGKLFESVPY 139 (402)
T ss_pred HHHHHHHHHHHHHHhCCCceeeec-CCcHHHHHHHHHHh-c--CCCCEEEEecCccCccccccccccccccceeEEEecC
Confidence 44444 456789999998765543 46777767666555 2 3899999999999876554321 1234565554432
Q ss_pred ----------cchhhc-c-CCCEeEEEEEcCCCCeeeccHHHHHHHHHhCCcEEEEEeccccccCC-----CCCCcccce
Q 001586 288 ----------LKDIDY-K-SGDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTIL-----KPPGELGAD 350 (1049)
Q Consensus 288 ----------~~~l~~-l-~~~t~~V~v~~pn~~G~i~di~~I~~~ah~~galliV~a~~~alg~l-----~~p~~~GaD 350 (1049)
++++++ + .+++++|++.+|+ +|...|+++|+++||++|++++++. .++.+.. ..+.. ++|
T Consensus 140 ~~~~~~~~id~~~l~~~i~~~~~~~v~~~~~~-~~~~~~~~~I~~l~~~~~~~li~D~-a~~~g~~~~g~~~~~~~-~~d 216 (402)
T cd00378 140 GVDPETGLIDYDALEKMALEFKPKLIVAGASA-YPRPIDFKRFREIADEVGAYLLVDM-AHVAGLVAGGVFPNPLP-GAD 216 (402)
T ss_pred CcCcccCCcCHHHHHHHHHhCCCCEEEecCcc-cCCCcCHHHHHHHHHhcCCEEEEEc-cchhhhhhcccCCCccc-CCc
Confidence 234444 4 4578888877764 4778899999999999999999942 2222221 22334 789
Q ss_pred EEEecC-ccccccCCCCCCceEEEEEch-hHHhcCCCceeeeeecCCCCcceeeecccccccccccccCCCccchhHHHH
Q 001586 351 IVVGSA-QRFGVPMGYGGPHAAFLATSQ-EYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLA 428 (1049)
Q Consensus 351 ivvgs~-k~lg~P~~~GGP~~G~l~~~~-~l~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irrekaTsni~t~~~l~a 428 (1049)
++++|. |+|+ ||.+|++.+++ ++.+++.-.. .+ + ..++++. +...+
T Consensus 217 v~~~s~sK~l~------G~~gg~i~~~~~~~~~~l~~~~---------~~-~-------------~~~~~~~---~~~~a 264 (402)
T cd00378 217 VVTTTTHKTLR------GPRGGLILTRKGELAKKINSAV---------FP-G-------------LQGGPHL---HVIAA 264 (402)
T ss_pred EEEeccccCCC------CCCceEEEeccHHHHHHHHHHh---------Cc-c-------------ccCCchH---HHHHH
Confidence 999998 6663 45556666665 6665541000 00 0 0011111 22222
Q ss_pred HHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEcCCC-CcceEEEecC--C--HHHHHHHHHHcCCeeeee-
Q 001586 429 NMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLP-FFDTVKVKCA--D--AHAIASAAYKIEMNLRVV- 502 (1049)
Q Consensus 429 ~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~g~~~v~~~~-~~~~v~i~~~--~--~~~v~~~L~~~gI~~~~~- 502 (1049)
+..++ ......++++..+++.++++++++.|++.| ++++..+ ....+.+.++ + ...+.+.|.++||.+...
T Consensus 265 ~~~al--~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~l~~~gI~v~~~~ 341 (402)
T cd00378 265 KAVAL--KEALEPEFKAYAKQVVENAKALAEALKERG-FKVVSGGTDNHLVLVDLRPKGITGKAAEDALEEAGITVNKNT 341 (402)
T ss_pred HHHHH--HHHhhHHHHHHHHHHHHHHHHHHHHHHhCC-CeEeecCCCCeEEEEeCCccCCCHHHHHHHHHHcCcEEcCCc
Confidence 22222 222222567788889999999999999887 8876322 2223445554 2 456777788889987531
Q ss_pred ---------cCCeEEEEeccCC----CHHHHHHHHHHHhC
Q 001586 503 ---------DSNTVTASFDETT----TLEDVDKLFIVFAG 529 (1049)
Q Consensus 503 ---------~~~~vris~~~~~----t~edid~lv~aL~~ 529 (1049)
....+|++++..+ +.+||+.+++.|..
T Consensus 342 ~p~~~~~~~~~~~lRi~~~~~~~~~~~~~di~~~~~~l~~ 381 (402)
T cd00378 342 LPWDPSSPFVPSGIRIGTPAMTTRGMGEEEMEEIADFIAR 381 (402)
T ss_pred CCCCCCCCCCCCeeEecCHHHHHhCCCHHHHHHHHHHHHH
Confidence 2357999999865 79999999999964
No 260
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.64 E-value=2.5e-14 Score=165.65 Aligned_cols=285 Identities=16% Similarity=0.172 Sum_probs=181.1
Q ss_pred HHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCEEEEEcCCCCCC
Q 001586 635 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGN 714 (1049)
Q Consensus 635 ~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~Vv~V~~d~~g~ 714 (1049)
.++++.+++++|.+...+..++|++.. ...+++.+. +++++|+++...+..++..+...|.+++.++. +++.
T Consensus 70 ~~lr~~ia~~~~~~~~~i~~t~G~~~~--l~~~~~~l~-----~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~-~~~~ 141 (367)
T PRK02731 70 FELKAALAEKFGVDPERIILGNGSDEI--LELLARAYL-----GPGDEVIYSEHGFAVYPIAAQAVGAKPVEVPA-KDYG 141 (367)
T ss_pred HHHHHHHHHHhCcCHHHEEEcCCHHHH--HHHHHHHhc-----CCCCEEEEecCCHHHHHHHHHHcCCeEEEecc-cCCC
Confidence 367888999999876556566665532 122223321 24678999877665555557789999999998 4577
Q ss_pred CCHHHHHHHHHhcCCCeEEEEEEcCC-ccccccccHHHHHHHHHHc--CCEEEEecccccccc-CcCCCC----ccCCc-
Q 001586 715 INIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDN--GGQVYMDGANMNAQV-GLTSPG----YIGAD- 785 (1049)
Q Consensus 715 iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~~di~eI~~lah~~--G~ll~vD~A~~~a~~-gl~~Pg----~~GaD- 785 (1049)
+|+++++++++ +++++|++++|+ .+|.+. +.+++.++++.+ |+++++|+++..... +...++ +...+
T Consensus 142 ~~~~~l~~~~~---~~~~~v~l~~p~nptG~~~-~~~~l~~l~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~ 217 (367)
T PRK02731 142 HDLDAMLAAVT---PRTRLVFIANPNNPTGTYL-PAEEVERFLAGVPPDVLVVLDEAYAEYVRRKDYEDGLELVAKFPNV 217 (367)
T ss_pred CCHHHHHHHhC---CCCcEEEEeCCCCCCCcCC-CHHHHHHHHHhCCCCcEEEEECcHHHhccCcCcccHHHHHhhcCCE
Confidence 99999999996 688999999995 599887 688999988875 899999998532110 100110 11223
Q ss_pred EEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHch
Q 001586 786 VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGS 865 (1049)
Q Consensus 786 i~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~ 865 (1049)
+++.++.|.|+ .+|.++|++++++++.+.+..- + ...+++ .....++..++.. .
T Consensus 218 i~~~S~SK~~g----~~G~RiG~l~~~~~~~~~l~~~------------~--~~~~~~------~~~~~~a~~~l~~--~ 271 (367)
T PRK02731 218 VVTRTFSKAYG----LAGLRVGYGIAPPEIIDALNRV------------R--QPFNVN------SLALAAAVAALDD--D 271 (367)
T ss_pred EEEeeehHhhc----CcccceeeeeCCHHHHHHHHHc------------c--CCCCCC------HHHHHHHHHHhCC--H
Confidence 44556777764 3467889999987765543210 0 001111 1111222333321 2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHHHCCcccCCC-CCCCCC
Q 001586 866 KGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTM-SWPVPG 943 (1049)
Q Consensus 866 eGl~~~~~~~~~~a~yL~~~L~~~-~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~-~~p~~~ 943 (1049)
+.+++..+....+.+++.+.|++. +.+. + +.+.+ +.++++ .+.+..+++++|.++||.+... .|..++
T Consensus 272 ~~~~~~~~~~~~~~~~l~~~L~~~g~~~~-~-~~g~~---~~i~~~-----~~~~~~~~~~~L~~~gI~v~~~~~~~~~~ 341 (367)
T PRK02731 272 AFVEKSRALNAEGMAWLTEFLAELGLEYI-P-SVGNF---ILVDFD-----DGKDAAEAYQALLKRGVIVRPVAGYGLPN 341 (367)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCccC-C-CCceE---EEEECC-----CCCCHHHHHHHHHHCCEEEEeCCCCCCCC
Confidence 234445555556677888888775 3321 1 12222 445553 1356789999999999987543 233357
Q ss_pred EEEEEccCCCCHHHHHHHHHHHHHHHH
Q 001586 944 TLMIEPTESESKEELDRYCDALISIRE 970 (1049)
Q Consensus 944 ~lri~~t~~~t~eeid~fv~aL~~i~~ 970 (1049)
++|+++. +.+|+++|+++|+++++
T Consensus 342 ~iRis~~---~~~e~~~l~~aL~~~~~ 365 (367)
T PRK02731 342 ALRITIG---TEEENRRFLAALKEFLA 365 (367)
T ss_pred eEEEecC---CHHHHHHHHHHHHHHHh
Confidence 8999985 68999999999998753
No 261
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.64 E-value=1.6e-14 Score=165.91 Aligned_cols=298 Identities=10% Similarity=0.049 Sum_probs=184.8
Q ss_pred HHHHHHHHHHHHHHhhCCCc---cccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccH----HHHHhcCC
Q 001586 630 YQEMFNNLGEWLCTITGFDS---FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNP----ATAAMCGM 702 (1049)
Q Consensus 630 ~~~~i~el~~~la~l~G~~~---~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~p----a~a~~~G~ 702 (1049)
..+++.++++++.++++.+. +.+..+||+.|.++++..+- .+++++++... |.+. ..++..|+
T Consensus 35 f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgT~a~ea~~~nl~--------~~~~~~l~i~~--G~fg~r~~~~a~~~g~ 104 (349)
T TIGR01364 35 FEAVANEAESDLRELLNIPDNYEVLFLQGGATGQFAAVPLNLL--------AEGKVADYIVT--GAWSKKAAKEAKKYGV 104 (349)
T ss_pred HHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcC--------CCCCeEEEEEC--CHHHHHHHHHHHHhCC
Confidence 34678899999999999743 34667778888876655432 13455554322 3322 23667888
Q ss_pred EEEEEcCCCCC----CCCHHHHHHHHHhcCCCeEEEEEEcCC-ccccccccHHHHHHHHHHcCCEEEEeccccccccCcC
Q 001586 703 KIVSVGTDAKG----NINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT 777 (1049)
Q Consensus 703 ~Vv~V~~d~~g----~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~ 777 (1049)
++.+..++.+ .+|+++++ ++ +++++|.+++-. .+|+.. + ++++.+|++++||+++..+...+
T Consensus 105 -~~~~~~~~~~~~~~~~~~~~~~--~~---~~~~~v~~th~ETstGv~~-~-----~l~~~~~~l~iVDavss~g~~~i- 171 (349)
T TIGR01364 105 -VNVVASGKEGNYTKIPDPSTWE--IS---EDAAYVHYCANETIHGVEF-R-----ELPDVKNAPLVADMSSNILSRPI- 171 (349)
T ss_pred -cEEEeccccCCCCCCCCHHhcC--CC---CCCCEEEEcCCCCcccEec-c-----eecccCCCeEEEEccccccCccC-
Confidence 7777765332 45666655 22 578888888874 499986 3 66777899999999865333222
Q ss_pred CCCccCCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHH
Q 001586 778 SPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISY 857 (1049)
Q Consensus 778 ~Pg~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~ 857 (1049)
... ..|++++++||+|+ .||+|++++++++.+.+....... .+.........+.++. +...+.+..
T Consensus 172 d~~--~~d~~~~ssqK~lg------P~Glg~l~~s~~~~~~~~~~~~~~-~~~~~~~~~~~~~~Tp-----~~~~i~al~ 237 (349)
T TIGR01364 172 DVS--KFGLIYAGAQKNIG------PAGLTVVIVRKDLLGRASRITPSM-LNYKIHAENDSMYNTP-----PTFAIYVSG 237 (349)
T ss_pred CHH--HccEEEEecccccC------CCceEEEEECHHHHhhcccCCCCc-chHHHHHhcCCCCCCC-----cHHHHHHHH
Confidence 122 34699999999873 478999999998776653321110 1100000001111111 112222344
Q ss_pred HHHHHHchh-hHHHHHHHHHHHHHHHHHHHhccCCe--eeccCCCceeeEEEEeccCccccCCCCHHHHHHHHHHCCccc
Q 001586 858 TYIAMMGSK-GLTEASKIAILNANYMAKRLEKHYPI--LFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHG 934 (1049)
Q Consensus 858 a~l~~lG~e-Gl~~~~~~~~~~a~yL~~~L~~~~~v--~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~~ 934 (1049)
+.|..+-.+ |+..+.++...+++++.++|+++-.+ ....+..+....+.|.++. .+. ..++.+.+.++|+.+
T Consensus 238 ~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~v~sf~~~~----~~~-~~~~~~~~~~~Gi~~ 312 (349)
T TIGR01364 238 LVFKWLKEQGGVKAIEKRNQAKAQLLYDTIDNSNGFYRNPVDPRNRSRMNVVFTLGN----EEL-EKRFLKEAEERGLVS 312 (349)
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCeeccCCCHHHcCCeEEEEecCC----hhH-hHHHHHHHHHCCCcc
Confidence 556667677 79999999999999999999986222 1111111111123344331 011 256667788899965
Q ss_pred CCCCCCCCCEEEEEccCCCCHHHHHHHHHHHHHHHH
Q 001586 935 PTMSWPVPGTLMIEPTESESKEELDRYCDALISIRE 970 (1049)
Q Consensus 935 ~~~~~p~~~~lri~~t~~~t~eeid~fv~aL~~i~~ 970 (1049)
..... ..+++|+|+..++|++|||+|+++|+++.+
T Consensus 313 ~~~~~-~~g~vRvS~~~~nt~edid~l~~al~~~~~ 347 (349)
T TIGR01364 313 LKGHR-SVGGMRASIYNAMPLEGVQALVDFMKEFQK 347 (349)
T ss_pred cCCcc-ccCeeEEECcCCCCHHHHHHHHHHHHHHHH
Confidence 43321 247999999999999999999999998754
No 262
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=99.64 E-value=4.4e-14 Score=162.84 Aligned_cols=283 Identities=18% Similarity=0.193 Sum_probs=182.1
Q ss_pred HHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCEEEEEcCCCCCC
Q 001586 635 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGN 714 (1049)
Q Consensus 635 ~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~Vv~V~~d~~g~ 714 (1049)
.++++.+++.++.+...+..++|++. +...+++.+. .++++|+++...+..+...++..|.+++.++.++++.
T Consensus 62 ~~lr~~ia~~~~~~~~~i~it~G~~~--~l~~~~~~l~-----~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~ 134 (351)
T PRK14807 62 EKLREELARYCSVVPTNIFVGNGSDE--IIHLIMLAFI-----NKGDVVIYPHPSFAMYSVYSKIAGAVEIPVKLKEDYT 134 (351)
T ss_pred HHHHHHHHHHhCCCcccEEEecCHHH--HHHHHHHHhc-----CCCCEEEEeCCChHHHHHHHHHcCCeEEEeecCCCCC
Confidence 36778888888887655555566542 2223333331 2568899987655444445778999999999987788
Q ss_pred CCHHHHHHHHHhcCCCeEEEEEEcCC-ccccccccHHHHHHHHHHcCCEEEEeccccccccCcCCC---CccCCcEEEeC
Q 001586 715 INIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSP---GYIGADVCHLN 790 (1049)
Q Consensus 715 iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~P---g~~GaDi~~~s 790 (1049)
+|+++++++++. .++++|++++|+ .+|.+- +.+++.+++++++.++++|+++.. +.+-..+ ....--|++.|
T Consensus 135 ~d~~~l~~~~~~--~~~k~v~l~~p~NPtG~~~-~~~~l~~l~~~~~~~~ivDe~y~~-~~~~~~~~~~~~~~~vi~~~S 210 (351)
T PRK14807 135 YDVGSFIKVIEK--YQPKLVFLCNPNNPTGSVI-EREDIIKIIEKSRGIVVVDEAYFE-FYGNTIVDVINEFENLIVLRT 210 (351)
T ss_pred CCHHHHHHHhhc--cCCCEEEEeCCCCCCCCCC-CHHHHHHHHHhCCCEEEEeCcchh-hcccchHHHhhhCCCEEEEec
Confidence 999999999972 378899999995 699887 799999999998899999998632 1111111 11122367788
Q ss_pred CCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHH
Q 001586 791 LHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTE 870 (1049)
Q Consensus 791 ~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~ 870 (1049)
++|+|++| |-++|+++.++++...+-.. +...+++ ...+. ++..++. ...+.+
T Consensus 211 ~SK~~~~~----GlRiG~~v~~~~~~~~~~~~--------------~~~~~~~--~~~q~----~~~~~l~---~~~~~~ 263 (351)
T PRK14807 211 LSKAFGLA----GLRVGYAVANENILKYLNLV--------------KSPYNIN--SLSQV----IALKVLR---TGVLKE 263 (351)
T ss_pred chHhcccc----hhceeeeecCHHHHHHHHHc--------------cCCCCcC--HHHHH----HHHHHHh---HHHHHH
Confidence 88988654 78899999877665543210 0011111 11121 1223332 223444
Q ss_pred HHHHHHHHHHHHHHHHhccCCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHHHCCcccCCCC--CCCCCEEEEE
Q 001586 871 ASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMS--WPVPGTLMIE 948 (1049)
Q Consensus 871 ~~~~~~~~a~yL~~~L~~~~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~--~p~~~~lri~ 948 (1049)
..+...++.+++.+.|++...+.+..+.+.+ +.++++ +..++.+.|.++|+.+.... +...+++||+
T Consensus 264 ~~~~~~~~r~~l~~~l~~~~g~~~~~~~~~~---~~i~~~--------~~~~~~~~l~~~gV~v~~~~~~~~~~~~iRis 332 (351)
T PRK14807 264 RVNYILNERERLIKELSKIPGIKVYPSKTNF---ILVKFK--------DADYVYQGLLERGILVRDFSKVEGLEGALRIT 332 (351)
T ss_pred HHHHHHHHHHHHHHHHHhCCCcEECcCCccE---EEEEcC--------CHHHHHHHHHHCCEEEEECCCCCCCCCeEEEE
Confidence 4555566777888888764232222222322 345543 46788999999999875332 2235789999
Q ss_pred ccCCCCHHHHHHHHHHHHHHH
Q 001586 949 PTESESKEELDRYCDALISIR 969 (1049)
Q Consensus 949 ~t~~~t~eeid~fv~aL~~i~ 969 (1049)
+. +.++.++|+++|++++
T Consensus 333 ~~---~~~~~~~l~~~l~~~~ 350 (351)
T PRK14807 333 VS---SCEANDYLINGLKELL 350 (351)
T ss_pred cC---CHHHHHHHHHHHHHhh
Confidence 85 5788999999998753
No 263
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.64 E-value=1.2e-13 Score=165.37 Aligned_cols=295 Identities=13% Similarity=0.081 Sum_probs=180.6
Q ss_pred HhhhHHHHHHHHHHHHHHHhCCC-------------CcceEeccchHHHHHHHH-HHhhhccC-----------------
Q 001586 205 IAQGRLESLLNFQTMIADLTGLP-------------MSNASLLDEGTAAAEAMA-MCNNIQKG----------------- 253 (1049)
Q Consensus 205 ~sqg~le~l~e~q~~ia~L~G~~-------------~~n~sl~~~~Ta~~eA~~-~a~~~~~~----------------- 253 (1049)
.|....+.-.+.-.|+++|++.. .+...+++|||.+.-..+ .|+....+
T Consensus 123 ~spa~t~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~~~~ 202 (522)
T TIGR03799 123 TSKAFTPLERQVLGMMHHLVYGQDDDFYRKWMHSADHSLGAFCSGGTVANITALWVARNRLLKADGDFKGVAREGLFAAL 202 (522)
T ss_pred cCcchHHHHHHHHHHHHHHhccCcccchhhcccCCCCCCeEEcCchHHHHHHHHHHHHHHhccccccccccccccchhhh
Confidence 44444455556667888888521 234567888885544333 33322100
Q ss_pred -----CCCEEEEcCCCCHHHHHHHHHhhcCCCe---EEEEeCc--------chhhc-cC----CCEeEEEE--EcC-CCC
Q 001586 254 -----KKKTFIIASNCHPQTIDICITRADGFDI---KVVVSDL--------KDIDY-KS----GDVCGVLV--QYP-GTE 309 (1049)
Q Consensus 254 -----~g~~Vlv~~~~Hps~~~~l~~~a~~~gi---~v~~v~~--------~~l~~-l~----~~t~~V~v--~~p-n~~ 309 (1049)
++..|++++..|.++.+.++.+ |+ +++.++. ++|++ +. .+++.++| +.. +.+
T Consensus 203 ~~~~~~~~~v~~S~~~H~S~~kaa~~l----glg~~~v~~vp~d~~g~~d~~~L~~~i~~~~~~g~~~~~vvataGtt~t 278 (522)
T TIGR03799 203 KHYGYDGLAILVSERGHYSLGKAADVL----GIGRDNLIAIKTDANNRIDVDALRDKCAELAEQNIKPLAIVGVAGTTET 278 (522)
T ss_pred hhccCCceEEEECCCchHHHHHHHHHc----CCCcccEEEEEeCCCCcCCHHHHHHHHHHHHHCCCCcEEEEEEecCcCC
Confidence 2347999999999998876543 44 5666554 34544 32 34444433 344 579
Q ss_pred eeeccHHHHHHHHHhCCcEEEEEeccccccCCCCC------Cc-ccceEEEecC-ccccccCCCCCCceEEEEEch-hHH
Q 001586 310 GEVLDYGDFIKNAHANGVKVVMATDLLALTILKPP------GE-LGADIVVGSA-QRFGVPMGYGGPHAAFLATSQ-EYK 380 (1049)
Q Consensus 310 G~i~di~~I~~~ah~~galliV~a~~~alg~l~~p------~~-~GaDivvgs~-k~lg~P~~~GGP~~G~l~~~~-~l~ 380 (1049)
|.++|+++|+++|+++|++++|++ .++.+.+..+ .. .+||.++.++ |++++|++ +|++++++ ++.
T Consensus 279 GaiDpl~eIa~i~~~~g~~lHVDa-A~gg~~~~~~~~r~~l~gle~aDSit~d~HK~l~~P~g-----~G~llvr~~~~~ 352 (522)
T TIGR03799 279 GNIDPLDEMADIAQELGCHFHVDA-AWGGATLLSNTYRHLLKGIERADSVTIDAHKQLYVPMG-----AGMVLFKDPALM 352 (522)
T ss_pred CCcCCHHHHHHHHHHcCCeEEEEc-hhhhHHHhCHHHHHHhcCchhCCEEEEChhhcCCcCcc-----cEEEEEeCHHHH
Confidence 999999999999999999999954 1222222111 22 3899999999 55777764 67888875 454
Q ss_pred hcCCCceeeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHH
Q 001586 381 RMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALG 460 (1049)
Q Consensus 381 ~~lpgrivG~s~d~~g~~~~~l~lqtreq~irrekaTsni~t~~~l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~ 460 (1049)
+.+... ...-.. .|...+ .+.+.|-++.+. + +.+.+++ .++|.+|++++.+++.++++|+.+.
T Consensus 353 ~~~~~~-~~Yl~~-~~~~d~--------~~~~legsR~~~----a-l~lw~aL--~~lG~~G~~~ii~~~~~la~~l~~~ 415 (522)
T TIGR03799 353 SAIEHH-AEYILR-KGSKDL--------GSHTLEGSRPGM----A-MLVYAGL--HIIGRKGYELLIDQSIEKAKYFADL 415 (522)
T ss_pred HHhccC-cchhcC-CCCCcc--------ccceeecCcchH----H-HHHHHHH--HHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 544321 000000 010000 011123122221 2 2333443 8899999999999999999999999
Q ss_pred hhcCCCeEEcCCCCcceEEEec-CC------------------------HHHHHHHHHHcCCe-eeee--c----C----
Q 001586 461 LKKLGTVEVQGLPFFDTVKVKC-AD------------------------AHAIASAAYKIEMN-LRVV--D----S---- 504 (1049)
Q Consensus 461 L~~~g~~~v~~~~~~~~v~i~~-~~------------------------~~~v~~~L~~~gI~-~~~~--~----~---- 504 (1049)
|++..+++++.++.++.|+|+. +. ...+.+++.+.|.. +... . .
T Consensus 416 L~~~~~~el~~~p~l~iv~Fr~~p~~~~~~l~~~~~~~~~~~~~~~~~ln~~i~~~~~~~G~~~vs~t~l~~~~~~g~~~ 495 (522)
T TIGR03799 416 IQQQPDFELVTEPELCLLTYRYVPEEVQQALAKADEEQREKINELLDRLTKFIQKRQREAGKSFVSRTRLTPAQYDHQPT 495 (522)
T ss_pred HhhCCCeEEecCCCccEEEEEEeChhhcccccccchhhhhhHHHHHHHHHHHHHHHHHhcCCEEEEEEEecccccCCCCc
Confidence 9988559999877677777763 10 13566666666763 3321 1 1
Q ss_pred CeEEEEe-ccCCCHHHHHHHHHH
Q 001586 505 NTVTASF-DETTTLEDVDKLFIV 526 (1049)
Q Consensus 505 ~~vris~-~~~~t~edid~lv~a 526 (1049)
-.+|+++ ...+|++||+.+++.
T Consensus 496 ~~lR~~~~np~tt~~~i~~~l~~ 518 (522)
T TIGR03799 496 VVFRVVLANPLTTHEILQDILDE 518 (522)
T ss_pred EEEEEEecCCCCCHHHHHHHHHH
Confidence 2489998 457889999988753
No 264
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.63 E-value=5.3e-14 Score=162.65 Aligned_cols=212 Identities=21% Similarity=0.202 Sum_probs=149.5
Q ss_pred HHHHHHHHHHhCCCCcceEeccchHHHHHHHHHHhhhccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCcc---h
Q 001586 214 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK---D 290 (1049)
Q Consensus 214 ~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a~~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~~~---~ 290 (1049)
..+++.+|+|.|.+. +.++++|.+|+.++++++. + +||+||+++..+..+...++.....+|+++.++|.. +
T Consensus 58 ~~le~~la~Le~g~~--a~~~~SGmaAi~~~l~~ll-~--~Gd~iv~~~~~Y~~t~~~~~~~l~~~gv~v~~~d~~d~~~ 132 (386)
T PF01053_consen 58 RALEQRLAALEGGED--ALLFSSGMAAISAALLALL-K--PGDHIVASDDLYGGTYRLLEELLPRFGVEVTFVDPTDLEA 132 (386)
T ss_dssp HHHHHHHHHHHT-SE--EEEESSHHHHHHHHHHHHS----TTBEEEEESSSSHHHHHHHHHCHHHTTSEEEEESTTSHHH
T ss_pred HHHHHHHHHhhcccc--eeeccchHHHHHHHHHhhc-c--cCCceEecCCccCcchhhhhhhhcccCcEEEEeCchhHHH
Confidence 345679999999855 7788999999988887763 3 789999999999999999998888899999999885 4
Q ss_pred hhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCC-cEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCCC
Q 001586 291 IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANG-VKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYG 366 (1049)
Q Consensus 291 l~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~g-alliV~a~~~alg~l~~p~~~GaDivvgs~-k~lg~P~~~G 366 (1049)
+++ ++++|++|+++.| |++..+.||++|+++||++| ++++|+ +.++-+++..|-++||||++.|+ |.+++. |
T Consensus 133 l~~~l~~~t~~v~~EspsNP~l~v~Dl~~i~~~a~~~g~~~~vVD-nT~atp~~~~pL~~GaDivv~S~TKyl~Gh---s 208 (386)
T PF01053_consen 133 LEAALRPNTKLVFLESPSNPTLEVPDLEAIAKLAKEHGDILVVVD-NTFATPYNQNPLELGADIVVHSATKYLSGH---S 208 (386)
T ss_dssp HHHHHCTTEEEEEEESSBTTTTB---HHHHHHHHHHTTT-EEEEE-CTTTHTTTC-GGGGT-SEEEEETTTTTTTS---S
T ss_pred HHhhccccceEEEEEcCCCcccccccHHHHHHHHHHhCCceEEee-ccccceeeeccCcCCceEEEeeccccccCC---c
Confidence 555 7889999999998 89999999999999999999 999994 67777788889999999999998 666532 2
Q ss_pred CCceEEEEEch--hHHhcCCCceeeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcchHH
Q 001586 367 GPHAAFLATSQ--EYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLK 444 (1049)
Q Consensus 367 GP~~G~l~~~~--~l~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irrekaTsni~t~~~l~a~~aa~y~~~~g~~Gl~ 444 (1049)
-=-+|.+.++. ++.+++ +..++.-| +.. ++. ..|+...|-+-+.
T Consensus 209 dv~~G~vv~~~~~~~~~~l-------------------------~~~~~~~G--~~~--~p~-----da~ll~rgl~Tl~ 254 (386)
T PF01053_consen 209 DVMGGAVVVNGSSELYDRL-------------------------REFRRLLG--ATL--SPF-----DAWLLLRGLRTLP 254 (386)
T ss_dssp SE-EEEEEESSHHHHHHHH-------------------------HHHHHHHT---B----HH-----HHHHHHHHHTTHH
T ss_pred ceeeEEEEECchhhhhhhh-------------------------cchhhhcC--ccc--hHH-----HHHHHhcCCCcHH
Confidence 11256777654 343322 00011111 110 111 1123344444555
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCeE
Q 001586 445 TIAQRVHGLAGTFALGLKKLGTVE 468 (1049)
Q Consensus 445 ~ia~~~~~~a~~l~~~L~~~g~~~ 468 (1049)
-..++..++|..+++.|++...++
T Consensus 255 ~R~~~~~~nA~~lA~~L~~hp~V~ 278 (386)
T PF01053_consen 255 LRMERQNENAEALAEFLEEHPKVK 278 (386)
T ss_dssp HHHHHHHHHHHHHHHHHHTSTTEE
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCC
Confidence 566777899999999999885465
No 265
>PRK07681 aspartate aminotransferase; Provisional
Probab=99.63 E-value=6e-14 Score=164.54 Aligned_cols=296 Identities=12% Similarity=0.119 Sum_probs=184.7
Q ss_pred hcHHHHHHHHHHHHHHhhCC--Cc-cccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCEE
Q 001586 628 QGYQEMFNNLGEWLCTITGF--DS-FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKI 704 (1049)
Q Consensus 628 ~G~~~~i~el~~~la~l~G~--~~-~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~V 704 (1049)
+|..++.+.+.+++....|. +. ..+..++|++. +..++++.+. .++++|+++...+..+...++..|+++
T Consensus 69 ~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~--al~~~~~~~~-----~~Gd~Vlv~~P~y~~~~~~~~~~G~~~ 141 (399)
T PRK07681 69 SGIQEFHEAVTEYYNNTHNVILNADKEVLLLMGSQD--GLVHLPMVYA-----NPGDIILVPDPGYTAYETGIQMAGATS 141 (399)
T ss_pred CCcHHHHHHHHHHHHHHhCCCCCCCCeEEECCCcHH--HHHHHHHHhC-----CCCCEEEECCCCccchHHHHHhcCCEE
Confidence 47666666667777666564 33 34555555542 2222333331 256899999887777777788999999
Q ss_pred EEEcCCCC--CCCCHHHHHHHHHhcCCCeEEEEEEcC-Ccccccc--ccHHHHHHHHHHcCCEEEEeccccccc-cCcCC
Q 001586 705 VSVGTDAK--GNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQ-VGLTS 778 (1049)
Q Consensus 705 v~V~~d~~--g~iD~~~L~~~i~~~~~~taaV~it~P-n~~G~i~--~di~eI~~lah~~G~ll~vD~A~~~a~-~gl~~ 778 (1049)
+.+|.+++ ..+|++++++++. +++++|++++| |.+|.+- +.+++|+++|+++|+++++|.++..-. .+-..
T Consensus 142 ~~v~~~~~~~~~~d~~~l~~~~~---~~~k~v~l~~P~NPTG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~ 218 (399)
T PRK07681 142 YYMPLKKENDFLPDLELIPEEIA---DKAKMMILNFPGNPVPAMAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKP 218 (399)
T ss_pred EEEecCCCCCCcCCHHHHHHhcc---ccceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEeccchhheeCCCCC
Confidence 99999765 3689999999886 68899999999 4699775 248899999999999999999864211 11000
Q ss_pred -C-----CccCCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHH
Q 001586 779 -P-----GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALI 852 (1049)
Q Consensus 779 -P-----g~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~ 852 (1049)
+ +...-.|++.|++|+|+.| |-++|++.+++++...+-.. ......+.+...+
T Consensus 219 ~~~~~~~~~~~~~i~~~S~SK~~~~~----GlRiG~~i~~~~l~~~~~~~--------------~~~~~~~~s~~~q--- 277 (399)
T PRK07681 219 ISFLSVPGAKEVGVEINSLSKSYSLA----GSRIGYMIGNEEIVRALTQF--------------KSNTDYGVFLPIQ--- 277 (399)
T ss_pred CChhhCCCCcccEEEEeecccccCCc----cceeEEEecCHHHHHHHHHH--------------HhhcccCCCHHHH---
Confidence 1 1112346777889988543 66799999887665543100 0000111111111
Q ss_pred HHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHHH-C
Q 001586 853 LPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMD-Y 930 (1049)
Q Consensus 853 ~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~-~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~-~ 930 (1049)
.++..++. -+.+-+++..+...++.+++.+.|++. +++. .+.+..+ +.++++ .+.+..+++++|.+ +
T Consensus 278 -~~~~~~l~-~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~--~p~~g~f--~~~~l~-----~~~~~~~~~~~l~~~~ 346 (399)
T PRK07681 278 -KAACAALR-NGAAFCEKNRGIYQERRDTLVDGFRTFGWNVD--KPAGSMF--VWAEIP-----KGWTSLSFAYALMDRA 346 (399)
T ss_pred -HHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHHHHCCCccc--CCCeeeE--EEEECC-----CCCCHHHHHHHHHHhC
Confidence 11222222 122334444445556778888988875 3332 2222222 445654 24567789988876 8
Q ss_pred CcccCC-CCCC--CCCEEEEEccCCCCHHHHHHHHHHHHH
Q 001586 931 GFHGPT-MSWP--VPGTLMIEPTESESKEELDRYCDALIS 967 (1049)
Q Consensus 931 Gi~~~~-~~~p--~~~~lri~~t~~~t~eeid~fv~aL~~ 967 (1049)
|+.+.. ..|. ..+++|+++. .+.++++++++.|++
T Consensus 347 gv~v~pg~~f~~~~~~~iRis~~--~~~~~~~~~l~~l~~ 384 (399)
T PRK07681 347 NVVVTPGHAFGPHGEGFVRIALV--QDEEVLQQAVENIRN 384 (399)
T ss_pred CEEEeCChhhCcCCCCeEEEEec--CCHHHHHHHHHHHHH
Confidence 998643 2232 2478999997 467899999998876
No 266
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.63 E-value=4.4e-14 Score=163.78 Aligned_cols=210 Identities=17% Similarity=0.139 Sum_probs=151.6
Q ss_pred HHHHHHHHHhCCCCcceEeccchHHHHHHHHHHhhhccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCcc---hh
Q 001586 215 NFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK---DI 291 (1049)
Q Consensus 215 e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a~~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~~~---~l 291 (1049)
.+++.++.|-|.+. +.++.+|++|+.++++++ .. +||+||+++..|+.+...++..++.+|+++++++.+ ++
T Consensus 68 ~Le~~la~le~~~~--~v~~sSG~aAi~~~l~al-l~--~GD~Vlv~~~~Y~~~~~l~~~~l~~~Gi~v~~vd~~~~e~l 142 (395)
T PRK05967 68 ALCKAIDALEGSAG--TILVPSGLAAVTVPFLGF-LS--PGDHALIVDSVYYPTRHFCDTMLKRLGVEVEYYDPEIGAGI 142 (395)
T ss_pred HHHHHHHHHhCCCC--EEEECcHHHHHHHHHHHh-cC--CCCEEEEccCCcHHHHHHHHHHHHhcCeEEEEeCCCCHHHH
Confidence 45578888887654 567778898888877765 33 899999999999999888776678899999999874 36
Q ss_pred hc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecCccc-cccCCCCCC
Q 001586 292 DY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSAQRF-GVPMGYGGP 368 (1049)
Q Consensus 292 ~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~p~~~GaDivvgs~k~l-g~P~~~GGP 368 (1049)
++ ++++|++|++++| |+++.+.|+++|+++||++|++++|+ +.++.+++..|.+|||||++.|++++ ++ -|.=
T Consensus 143 ~~al~~~TklV~lesPsNP~l~v~dl~~I~~la~~~g~~vvVD-~t~a~p~~~~pl~~GaDivv~S~tKy~~G---h~d~ 218 (395)
T PRK05967 143 AKLMRPNTKVVHTEAPGSNTFEMQDIPAIAEAAHRHGAIVMMD-NTWATPLYFRPLDFGVDISIHAATKYPSG---HSDI 218 (395)
T ss_pred HHhcCcCceEEEEECCCCCCCcHHHHHHHHHHHHHhCCEEEEE-CCccCceecChhHcCCCEEEEecccccCC---CCCe
Confidence 66 7889999999997 78999999999999999999999994 45566677789999999999999444 32 1222
Q ss_pred ceEEEEEchhHHhcCCCceeeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcchHHHHHH
Q 001586 369 HAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQ 448 (1049)
Q Consensus 369 ~~G~l~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irrekaTsni~t~~~l~a~~aa~y~~~~g~~Gl~~ia~ 448 (1049)
-+|++..++++.+++ ...++..|.. + ++. ..|+...|.+-|.-..+
T Consensus 219 ~~G~v~~~~~~~~~l-------------------------~~~~~~~G~~-~---~p~-----da~l~~rgl~Tl~lR~~ 264 (395)
T PRK05967 219 LLGTVSANEKCWPQL-------------------------LEAHGTLGLC-A---GPD-----DTYQILRGLRTMGIRLE 264 (395)
T ss_pred eEEEEEcCHHHHHHH-------------------------HHHHHHcCCC-C---CHH-----HHHHHHcCcccHHHHHH
Confidence 245555555433222 0011111110 0 111 12445566666666677
Q ss_pred HHHHHHHHHHHHhhcCCCe
Q 001586 449 RVHGLAGTFALGLKKLGTV 467 (1049)
Q Consensus 449 ~~~~~a~~l~~~L~~~g~~ 467 (1049)
|..++|..+++.|++...+
T Consensus 265 ~~~~na~~lA~~L~~hp~v 283 (395)
T PRK05967 265 HHRKSALEIARWLEGRPDV 283 (395)
T ss_pred HHHHHHHHHHHHHHhCCCC
Confidence 7889999999999987534
No 267
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.63 E-value=1.8e-14 Score=166.34 Aligned_cols=281 Identities=14% Similarity=0.113 Sum_probs=176.3
Q ss_pred HHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCC-CEEEEcCCCCCccHHHHHhcCCEEEEEcCCCCC
Q 001586 635 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHR-NVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKG 713 (1049)
Q Consensus 635 ~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r-~~VLip~saHg~~pa~a~~~G~~Vv~V~~d~~g 713 (1049)
.++++.+++.+|.+...+..+.|++. +..++++.+. .++ ++|+++...+..+...++..|++++.+|.++++
T Consensus 63 ~~Lr~aia~~~~~~~~~I~it~Gs~~--~i~~~~~~~~-----~~g~d~vlv~~P~y~~y~~~~~~~g~~v~~v~~~~~~ 135 (354)
T PRK04635 63 PELINAYSAYAGVAPEQILTSRGADE--AIELLIRAFC-----EPGQDSIACFGPTYGMYAISAETFNVGVKALPLTADY 135 (354)
T ss_pred HHHHHHHHHHhCcCHHHEEEeCCHHH--HHHHHHHHhc-----CCCCCeEEEcCCChHHHHHHHHHcCCEEEEEecCCCC
Confidence 36778888999998876666666542 2333344432 134 789988765544555678899999999998778
Q ss_pred CCCHHHHHHHHHhcCCCeEEEEEEcCC-ccccccccHHHHHHHHHHc-CCEEEEeccccccccCcCCCCcc---CCc-EE
Q 001586 714 NINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDN-GGQVYMDGANMNAQVGLTSPGYI---GAD-VC 787 (1049)
Q Consensus 714 ~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~~di~eI~~lah~~-G~ll~vD~A~~~a~~gl~~Pg~~---GaD-i~ 787 (1049)
.+|++.++ ++ +++++|++++|+ .+|.+- +.+++.++++.. ++++++|+++.. +........+ ... ++
T Consensus 136 ~~~~~~l~-~~----~~~~li~i~nP~NPTG~~~-~~~~l~~l~~~~~~~~vivDeay~~-~~~~~s~~~~~~~~~~~iv 208 (354)
T PRK04635 136 QLPLDYIE-QL----DGAKLVFICNPNNPTGTVI-DRADIEQLIEMTPDAIVVVDEAYIE-FCPEYSVADLLASYPNLVV 208 (354)
T ss_pred CCCHHHHH-hc----cCCCEEEEeCCCCCCCccC-CHHHHHHHHHhCCCcEEEEeCchHh-hccCcchHHHHhhCCCEEE
Confidence 89999987 33 578899999995 699987 688888888763 689999998631 1110110011 111 45
Q ss_pred EeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhh
Q 001586 788 HLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (1049)
Q Consensus 788 ~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eG 867 (1049)
+.+++|+|++ .|.++|++++++++.+.+-.. ....++++ ....++.+++...|.+-
T Consensus 209 ~~S~SK~~~l----~GlRlG~~i~~~~~~~~l~~~--------------~~~~~~~~------~~~~~a~~~l~~~~~~~ 264 (354)
T PRK04635 209 LRTLSKAFAL----AGARCGFTLANEELIEILMRV--------------IAPYPVPL------PVSEIATQALSEAGLAR 264 (354)
T ss_pred EechHHHhhh----hHHHHhhhhCCHHHHHHHHhh--------------cCCCCCCH------HHHHHHHHHHhcccHHH
Confidence 6778898854 367789999887766543210 00011111 11122333333222222
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHHHCCcccCCCC-CCCCCEEE
Q 001586 868 LTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMS-WPVPGTLM 946 (1049)
Q Consensus 868 l~~~~~~~~~~a~yL~~~L~~~~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~-~p~~~~lr 946 (1049)
+++..+...++.+++.+.|+++-.+.+..+.+.+ ++++++ +..++.+.|.++||.+.... ...++++|
T Consensus 265 ~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~g~f---~~~~~~--------~~~~~~~~l~~~gv~v~~~~~~~~~~~lR 333 (354)
T PRK04635 265 MKFQVLDLNAQGARLQAALSMYGGAKVLEGNGNY---VLAKFD--------DVDAVFKALWDAGIVARAYKDPRLANCIR 333 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCceECCCCCcE---EEEECC--------CHHHHHHHHHHCCEEEEECCCCCCCCeEE
Confidence 3334444556678888999875212111222322 345542 35678888999999875433 22457899
Q ss_pred EEccCCCCHHHHHHHHHHHHH
Q 001586 947 IEPTESESKEELDRYCDALIS 967 (1049)
Q Consensus 947 i~~t~~~t~eeid~fv~aL~~ 967 (1049)
|++ .+.+|+++|+++|++
T Consensus 334 is~---~~~e~~~~l~~al~~ 351 (354)
T PRK04635 334 FSF---SNRAETDKLIGLIRN 351 (354)
T ss_pred EEe---CCHHHHHHHHHHHHH
Confidence 997 478999999999975
No 268
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=99.63 E-value=5e-14 Score=162.29 Aligned_cols=266 Identities=15% Similarity=0.205 Sum_probs=180.9
Q ss_pred HHHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEE-EcCCCCCccHHHHHhc-------CC---
Q 001586 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMC-------GM--- 702 (1049)
Q Consensus 634 i~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VL-ip~saHg~~pa~a~~~-------G~--- 702 (1049)
..++.+.+++++|.+. .++.+||+++++++++++|.|. +|++|| ...+.||..-.+.... ++
T Consensus 68 ~~~la~~l~~~~~~~~-v~~~~SGseA~e~Alklar~~~------gr~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~ 140 (364)
T PRK04013 68 KEEMLEELSKWVNYEY-VYMGNSGTEAVEAALKFARLYT------GRKEIIAMTNAFHGRTMGALSATWKPKYREDFEPL 140 (364)
T ss_pred HHHHHHHHHhhcCCCE-EEEeCchHHHHHHHHHHHHHHh------CCCEEEEECCccccCchhhccCCCCcccccCCCCC
Confidence 4477888999988765 4678999999999999888762 346666 6788999765543321 11
Q ss_pred --EEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-cccccccc---HHHHHHHHHHcCCEEEEeccccccccCc
Q 001586 703 --KIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEG---IDEICKIIHDNGGQVYMDGANMNAQVGL 776 (1049)
Q Consensus 703 --~Vv~V~~d~~g~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~~d---i~eI~~lah~~G~ll~vD~A~~~a~~gl 776 (1049)
.++.+|. .|++++++.++ +++++|+++... ..|++.+| +++|.++|+++|+++++|+++ .|+
T Consensus 141 ~~~~~~~~~-----~d~~~l~~~i~---~~~aAvivEpi~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~----tG~ 208 (364)
T PRK04013 141 VPGFKHIPF-----NDVEAAKEAIT---KETAAVIFEPIQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQ----SGL 208 (364)
T ss_pred CCCcEEecC-----CCHHHHHHHhc---CCcEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechh----hcC
Confidence 2334444 27889999886 789999888653 45666655 999999999999999999874 466
Q ss_pred CCCCcc--------CCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchh
Q 001586 777 TSPGYI--------GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWG 848 (1049)
Q Consensus 777 ~~Pg~~--------GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g 848 (1049)
+.|.+ .+|++++ .|.+ ++|-|- |.+..++++.+ +. ..+++.|
T Consensus 209 -RtG~~~a~~~~gv~PDiv~~--gK~l----ggG~P~-~a~~~~~~~~~---~~-------------------~~~T~~g 258 (364)
T PRK04013 209 -RTGKFLAIEHYKVEPDIVTM--GKGI----GNGVPV-SLTLTNFDVER---GK-------------------HGSTFGG 258 (364)
T ss_pred -CCCchhHHHhcCCCCCEEEe--cccc----cCCcee-EEEEecccccC---CC-------------------cCCCCCc
Confidence 66543 4688887 4766 344454 44445544321 10 0112446
Q ss_pred hHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhc-c-CCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHH
Q 001586 849 SALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEK-H-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKR 926 (1049)
Q Consensus 849 ~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~-~-~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~ 926 (1049)
+++.++++.+.|..+-++++.+.++.. + ..|.. . .++ .|. | .+.. +.+. .+...+.+.
T Consensus 259 np~~~aaa~a~l~~i~~~~l~~~~~~~------l-~~l~~~~v~~v--RG~-G-l~~g--ve~~-------~~~~~i~~~ 318 (364)
T PRK04013 259 NPLACKAVAVTLRILRRERLVEKAGEK------F-IEIKGERVVTT--RGR-G-LMIG--IVLK-------KPVGKYVEE 318 (364)
T ss_pred CHHHHHHHHHHHHHHHhccHHHHHHHH------H-HHhccCcceee--eeC-c-EEEE--EEeC-------CcHHHHHHH
Confidence 778888899999999888877655432 2 22322 1 122 121 2 2322 3332 135678899
Q ss_pred HHHCCcccCCCCCCCCCEEEEEccCCCCHHHHHHHHHHHHHHHHH
Q 001586 927 LMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREE 971 (1049)
Q Consensus 927 L~~~Gi~~~~~~~p~~~~lri~~t~~~t~eeid~fv~aL~~i~~~ 971 (1049)
+.++|+.+.... .+.+|+.|+...|++|+|.++++|.+++.+
T Consensus 319 ~~~~Gll~~~~g---~~vlr~~Ppl~it~~~i~~~~~~l~~~l~~ 360 (364)
T PRK04013 319 LQNRGYLVHTAG---QRVIRLLPPLIISKDTMEEAKSAIEGVIND 360 (364)
T ss_pred HHhCCcEEeeCC---CCEEEEeCCcccCHHHHHHHHHHHHHHHHH
Confidence 999999875332 378999999999999999999999998865
No 269
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.63 E-value=1.4e-13 Score=162.22 Aligned_cols=297 Identities=16% Similarity=0.187 Sum_probs=186.6
Q ss_pred HHHHHHHHHHhhCCC--ccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEE-EcCCCCCccHHHHHhcC---------
Q 001586 634 FNNLGEWLCTITGFD--SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCG--------- 701 (1049)
Q Consensus 634 i~el~~~la~l~G~~--~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VL-ip~saHg~~pa~a~~~G--------- 701 (1049)
..++.+.|+++++-+ .-.++.+||+++++++++.+|.| + +|.+|| ...+.||....+....|
T Consensus 85 ~~~la~~l~~~~p~~~~~~v~f~~SGseA~e~AlklAr~~---t---gr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~ 158 (425)
T PRK07495 85 YVRLAERLNALVPGDFAKKTIFVTTGAEAVENAVKIARAA---T---GRSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGF 158 (425)
T ss_pred HHHHHHHHHHhCCCCCCCEEEECCchHHHHHHHHHHHHHh---h---CCCeEEEECCCcCCccHHHhhhcCCCcccccCC
Confidence 446888899988532 23578899999999999998876 2 345566 68889998655432211
Q ss_pred ----CEEEEEcCCCC--CC---CCHHHHHHHHHh--cCCCeEEEEEEcC-Ccccccc---ccHHHHHHHHHHcCCEEEEe
Q 001586 702 ----MKIVSVGTDAK--GN---INIEELRKAAEA--NRDNLSTLMVTYP-STHGVYE---EGIDEICKIIHDNGGQVYMD 766 (1049)
Q Consensus 702 ----~~Vv~V~~d~~--g~---iD~~~L~~~i~~--~~~~taaV~it~P-n~~G~i~---~di~eI~~lah~~G~ll~vD 766 (1049)
-.++.+|++.+ |. -+++++++.+++ +.+++++|+++.. +..|++. ..+++|.++|++||+++++|
T Consensus 159 ~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~~iaavi~EPv~g~~G~~~~~~~~l~~l~~l~~~~g~llI~D 238 (425)
T PRK07495 159 GAMMPDVYHVPFPVELHGVSVEQSLAALDKLFKADVDPQRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQHGILLIAD 238 (425)
T ss_pred CCCCCCeEEecCCcccccccHHHHHHHHHHHHHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEe
Confidence 13455555322 21 125566777753 2467888877754 2366553 25899999999999999999
Q ss_pred ccccccccCcCCCCc--------cCCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCC
Q 001586 767 GANMNAQVGLTSPGY--------IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQP 838 (1049)
Q Consensus 767 ~A~~~a~~gl~~Pg~--------~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~ 838 (1049)
+++ .|+.+.|. .-+|++++ .|.++ + |-.+|++++++++.+.+.... +
T Consensus 239 Ev~----tG~gr~G~~~a~~~~gv~pDi~tl--sK~l~----~-G~pigav~~~~~i~~~~~~~~---------~----- 293 (425)
T PRK07495 239 EVQ----TGFARTGKLFAMEHHEVAADLTTM--AKGLA----G-GFPLAAVTGRAEIMDAPGPGG---------L----- 293 (425)
T ss_pred chh----hcCCcCCCceeecccCCCCCEEee--hhhhc----C-CccceEEEEcHHHHhccCCCC---------c-----
Confidence 975 34444432 23677766 47763 3 334777888877766542110 0
Q ss_pred CCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc---CCee--eccCCCceeeEEEEeccCcc
Q 001586 839 LGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRGLK 913 (1049)
Q Consensus 839 t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~---~~v~--~~g~~g~~~~e~iv~~~~~~ 913 (1049)
.+++.|+++.++++.+.+..+..+++. ++...+.++|.++|+++ +..+ ..|. | .+ +.+.+..-.
T Consensus 294 ----~~T~~~~pl~~aaa~a~l~~l~~~~l~---~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~-G-l~--~~iel~~~~ 362 (425)
T PRK07495 294 ----GGTYGGNPLGIAAAHAVLDVIEEEDLC---ERANQLGNRLKQRLASLRETVPEIADIRGP-G-FM--NAVEFNDAD 362 (425)
T ss_pred ----CCCCCCCHHHHHHHHHHHHHHHhchHH---HHHHHHHHHHHHHHHHHHhhCCCeeeeecC-c-eE--EEEEEecCC
Confidence 011234566667777888888665554 34446777888888764 3321 1122 2 22 223321100
Q ss_pred -ccCC-CCHHHHHHHHHHCCcccCCCCCCCCCEEEEEccCCCCHHHHHHHHHHHHHHHHHHH
Q 001586 914 -NTAG-IEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIA 973 (1049)
Q Consensus 914 -~~~g-~~~~~v~k~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~eeid~fv~aL~~i~~~i~ 973 (1049)
.... .....+.+.+.++|+.+.... +.++.+|+.|....|++|+|.++++|.++++++.
T Consensus 363 ~~~~~~~~~~~~~~~~~~~Gvl~~~~g-~~~~~~r~~Ppl~it~~~id~~~~~l~~~l~~~~ 423 (425)
T PRK07495 363 SGLPSAEFANRVRLKALEKGLILLTCG-VHGNVIRFLAPITIQDDVFAEALDILEASILEAS 423 (425)
T ss_pred CCCccHHHHHHHHHHHHHCCeEEeecC-CCCCEEEEeCCCccCHHHHHHHHHHHHHHHHHHh
Confidence 0000 013467788889999875332 1247999999999999999999999999987754
No 270
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.63 E-value=1.6e-13 Score=160.86 Aligned_cols=292 Identities=16% Similarity=0.250 Sum_probs=187.9
Q ss_pred HHHHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHh-cCC-CCCCEEE-EcCCCCCccHHHHHhcCC-------
Q 001586 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKA-RGD-HHRNVCI-IPVSAHGTNPATAAMCGM------- 702 (1049)
Q Consensus 633 ~i~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~-~G~-~~r~~VL-ip~saHg~~pa~a~~~G~------- 702 (1049)
...++++.+++++|++. .++.+||+.++++++..++.|... +|. ..+++|| +..+.||.........+-
T Consensus 74 ~~~~~~~~l~~~~~~~~-~~~~~SGs~A~e~al~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~ 152 (400)
T PTZ00125 74 VLGLAEKYITDLFGYDK-VLPMNSGAEAGETALKFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSASTDPKCYNNF 152 (400)
T ss_pred HHHHHHHHHHhCCCCCE-EEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcCCcchhccC
Confidence 45678899999998875 467889999999999888766432 221 1234555 677788876655433221
Q ss_pred -----EEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-Ccccccccc---HHHHHHHHHHcCCEEEEeccccccc
Q 001586 703 -----KIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEG---IDEICKIIHDNGGQVYMDGANMNAQ 773 (1049)
Q Consensus 703 -----~Vv~V~~d~~g~iD~~~L~~~i~~~~~~taaV~it~P-n~~G~i~~d---i~eI~~lah~~G~ll~vD~A~~~a~ 773 (1049)
.++.++. .|+++|++.++ .+++++|+++.+ |.+|.+.++ +++|.++|++||+++++|+++.
T Consensus 153 ~~~~~~~~~~~~-----~d~~~le~~l~--~~~~~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~--- 222 (400)
T PTZ00125 153 GPFVPGFELVDY-----NDVEALEKLLQ--DPNVAAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQT--- 222 (400)
T ss_pred CCCCCCceEeCC-----CCHHHHHHHhC--CCCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc---
Confidence 1222222 48999999996 267999988776 568887632 9999999999999999999853
Q ss_pred cCcCCCC--------ccCCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCcc
Q 001586 774 VGLTSPG--------YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAA 845 (1049)
Q Consensus 774 ~gl~~Pg--------~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa 845 (1049)
++.+.| ...+|+++++ |+|+ +|++++|++++++++...+..... . ...+
T Consensus 223 -g~g~~G~~~~~~~~~~~pd~~~~s--K~l~----~g~~~ig~v~~~~~~~~~~~~~~~------------~--~t~~-- 279 (400)
T PTZ00125 223 -GLGRTGKLLAHDHEGVKPDIVLLG--KALS----GGLYPISAVLANDDVMLVIKPGEH------------G--STYG-- 279 (400)
T ss_pred -CCCccchhhHHHhcCCCCCEEEEc--cccc----CCCcCcEEEEEcHHHHhhccCCCC------------C--CCCC--
Confidence 222221 1236888763 8874 455679999999887765432100 0 0111
Q ss_pred chhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc---CCee--eccCCCceeeEEEEeccCccccCCCCH
Q 001586 846 PWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRGLKNTAGIEP 920 (1049)
Q Consensus 846 ~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~---~~v~--~~g~~g~~~~e~iv~~~~~~~~~g~~~ 920 (1049)
+++..+.++.+.+..+..+++.+ +..++.+++.++|++. .... ..+ .|.+ +.+.++. ..+.+.
T Consensus 280 --~~~~~~~aa~~~l~~i~~~~~~~---~~~~~~~~l~~~l~~l~~~~~~~~~~~~-~g~~---~~v~~~~---~~~~~~ 347 (400)
T PTZ00125 280 --GNPLACAVAVEALEVLKEEKLAE---NAQRLGEVFRDGLKELLKKSPWVKEIRG-KGLL---NAIVFDH---SDGVNA 347 (400)
T ss_pred --cCHHHHHHHHHHHHHHHhcCHHH---HHHHHHHHHHHHHHHHHhcCCCeEEEec-ccEE---EEEEEcc---CcchHH
Confidence 12333444555566665555543 3334667788888764 1211 111 1222 2222221 012356
Q ss_pred HHHHHHHHHCCcccCCCCCCCCCEEEEEccCCCCHHHHHHHHHHHHHHHHHHH
Q 001586 921 EDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIA 973 (1049)
Q Consensus 921 ~~v~k~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~eeid~fv~aL~~i~~~i~ 973 (1049)
.++.++|.++|+.+.... .+.+|++|+...+++|+|++++.|.+++.++.
T Consensus 348 ~~~~~~l~~~Gv~v~~~~---~~~lRi~~~~~~~~~~i~~~l~~l~~~l~~~~ 397 (400)
T PTZ00125 348 WDLCLKLKENGLLAKPTH---DNIIRFAPPLVITKEQLDQALEIIKKVLKSFD 397 (400)
T ss_pred HHHHHHHHHCCeEEeecC---CCEEEEECCccCCHHHHHHHHHHHHHHHHHHh
Confidence 789999999998874222 47899999988999999999999999877653
No 271
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.63 E-value=3.9e-14 Score=165.90 Aligned_cols=274 Identities=16% Similarity=0.159 Sum_probs=184.9
Q ss_pred HHHHHHHHHHhCCCCcceEeccchHHHHHHHHHHhhhccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCcc---h
Q 001586 214 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK---D 290 (1049)
Q Consensus 214 ~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a~~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~~~---~ 290 (1049)
.++++.+|++.|.+ ++.++.+|++++.++++++ .. +||+||++...|+.+...+...++..|++++++|.. +
T Consensus 67 ~~Le~~iA~~~g~~--~~l~~~sG~~Ai~~al~~l-l~--~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~d~e~ 141 (400)
T PRK06234 67 TEVENKLALLEGGE--AAVVAASGMGAISSSLWSA-LK--AGDHVVASDTLYGCTFALLNHGLTRYGVEVTFVDTSNLEE 141 (400)
T ss_pred HHHHHHHHHHhCCC--cEEEEcCHHHHHHHHHHHH-hC--CCCEEEEecCccchHHHHHHHHHhhCCeEEEEECCCCHHH
Confidence 35678999999976 4678899998877666554 23 889999999999999888776677889999999864 4
Q ss_pred hhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhC--CcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCC
Q 001586 291 IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHAN--GVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGY 365 (1049)
Q Consensus 291 l~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~--galliV~a~~~alg~l~~p~~~GaDivvgs~-k~lg~P~~~ 365 (1049)
+++ ++++|++|++++| |++|.+.|+++|+++||++ |++++|+ +..+.+....|.++|+||+++|. |.|+++
T Consensus 142 l~~~i~~~tklI~iesP~NPtG~v~dl~~I~~la~~~~~~i~livD-ea~~~~~~~~~l~~g~Divv~S~sK~l~g~--- 217 (400)
T PRK06234 142 VRNALKANTKVVYLETPANPTLKVTDIKAISNIAHENNKECLVFVD-NTFCTPYIQRPLQLGADVVVHSATKYLNGH--- 217 (400)
T ss_pred HHHHhccCCeEEEEECCCCCCCCcCCHHHHHHHHHhcCCCCEEEEE-CCCCchhcCCchhhCCcEEEeeccccccCC---
Confidence 555 7788999999998 7899999999999999997 8999994 45555555667788999999998 777532
Q ss_pred CCCceEEEEEchhHHhcCCCceeeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcchHHH
Q 001586 366 GGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKT 445 (1049)
Q Consensus 366 GGP~~G~l~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irrekaTsni~t~~~l~a~~aa~y~~~~g~~Gl~~ 445 (1049)
|...+|++++++++.+++- ..+ .+..-+ . +.++. .+. +...|.+-+..
T Consensus 218 g~~~gG~v~~~~~~~~~l~--~~~----------------------~~~~~g-~--~l~p~---~a~--l~~~~l~tl~~ 265 (400)
T PRK06234 218 GDVIAGFVVGKEEFINQVK--LFG----------------------IKDMTG-S--VIGPF---EAF--LIIRGMKTLQI 265 (400)
T ss_pred CCceeEEEEecHHHHHHHH--HHH----------------------HHHhcC-C--CCCHH---HHH--HHHhccCcHHH
Confidence 2233689999887765541 000 000000 0 00121 111 23344445556
Q ss_pred HHHHHHHHHHHHHHHhhcCCCeE-EcCC-----C-----------CcceEEEecCC----HHHHHHHHHHcCC--eee--
Q 001586 446 IAQRVHGLAGTFALGLKKLGTVE-VQGL-----P-----------FFDTVKVKCAD----AHAIASAAYKIEM--NLR-- 500 (1049)
Q Consensus 446 ia~~~~~~a~~l~~~L~~~g~~~-v~~~-----~-----------~~~~v~i~~~~----~~~v~~~L~~~gI--~~~-- 500 (1049)
+.++..+++.++++.|++...++ ++.+ + +..-|+|.+++ +.++.+.|.-.++ .++
T Consensus 266 r~~~~~~na~~~a~~L~~~~~V~~V~~p~l~~~~~~~~~~~~~~~~g~l~s~~l~~~~~~~~~f~~~l~~~~~~~s~G~~ 345 (400)
T PRK06234 266 RMEKHCKNAMKVAKFLESHPAVEKVYYPGLESFEYYELAKKQMSLPGAMISFELKGGVEEGKVVMNNVKLATLAVSLGDA 345 (400)
T ss_pred HHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCCcHHHHHHhCCCCCceEEEEecCcHHHHHHHHHhCCcceEeccCCCC
Confidence 77778899999999999865343 3211 1 11247777754 3455555543332 110
Q ss_pred -------------e----------ecCCeEEEEeccCCCHHHHHHHHHHHh
Q 001586 501 -------------V----------VDSNTVTASFDETTTLEDVDKLFIVFA 528 (1049)
Q Consensus 501 -------------~----------~~~~~vris~~~~~t~edid~lv~aL~ 528 (1049)
. +.++.||+|++.-+.++=|+.|.++|.
T Consensus 346 ~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~svGlE~~~dl~~dl~~al~ 396 (400)
T PRK06234 346 ETLIQHPASMTHSPYTAEERKEAGISDGLVRLSVGLEDVDDIIADLKQALD 396 (400)
T ss_pred CceecCCccCCCCCCCHHHHHhcCCCCCeEEEEeCCCCHHHHHHHHHHHHH
Confidence 0 124679999997765555666666664
No 272
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.63 E-value=2.4e-14 Score=168.64 Aligned_cols=141 Identities=24% Similarity=0.262 Sum_probs=117.4
Q ss_pred HHHHHHHHHhCCCCcceEeccchHHHHHHHHHHhhhccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCcc---hh
Q 001586 215 NFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK---DI 291 (1049)
Q Consensus 215 e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a~~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~~~---~l 291 (1049)
.+++.+|++.|.+. +.++.+|++++.++++++ .. +||+||+++..|+.+...+...++..|++++++|.. ++
T Consensus 68 ~Le~~lA~leg~~~--al~~~sG~~Ai~~al~~l-l~--~GD~Vlv~~~~y~~t~~~~~~~~~~~Gv~v~~vd~~d~e~l 142 (431)
T PRK08248 68 VFEKRIAALEGGIG--ALAVSSGQAAITYSILNI-AS--AGDEIVSSSSLYGGTYNLFAHTLPKLGITVKFVDPSDPENF 142 (431)
T ss_pred HHHHHHHHHhCCCc--EEEECCHHHHHHHHHHHH-hC--CCCEEEEccCchhhHHHHHHHHHHhCCEEEEEECCCCHHHH
Confidence 46689999999754 778899999888877665 23 889999999999998888877778899999999864 45
Q ss_pred hc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccc
Q 001586 292 DY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGV 361 (1049)
Q Consensus 292 ~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~p~~~GaDivvgs~-k~lg~ 361 (1049)
++ +++++++|++++| |++|.+.|+++|+++||++|++++|+ +.++.+....|.++|+|+++.|+ |.+++
T Consensus 143 ~~ai~~~tklV~l~sp~NPtG~v~di~~I~~la~~~gi~vIvD-~t~a~~~~~~pl~~gaDivv~S~tK~lgg 214 (431)
T PRK08248 143 EAAITDKTKALFAETIGNPKGDVLDIEAVAAIAHEHGIPLIVD-NTFASPYLLRPIEHGADIVVHSATKFIGG 214 (431)
T ss_pred HHhcCCCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEe-CCCCccccCChhHcCCCEEEEcCccccCC
Confidence 55 7788999999987 89999999999999999999999994 34555556667789999999998 66653
No 273
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.63 E-value=3.9e-14 Score=163.16 Aligned_cols=282 Identities=17% Similarity=0.211 Sum_probs=182.8
Q ss_pred HHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCEEEEEcCCCCCCC
Q 001586 636 NLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNI 715 (1049)
Q Consensus 636 el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~Vv~V~~d~~g~i 715 (1049)
++++.+++.++.+...+..++|++. +..++++.+. .++++|+++...+..+...++..|++++.++.++++.+
T Consensus 64 ~lr~aia~~~~~~~~~I~it~G~~~--al~~~~~~l~-----~~gd~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~ 136 (353)
T PRK05387 64 ALRQAIAAYYGLDPEQVFVGNGSDE--VLAHAFLAFF-----NHDRPLLFPDITYSFYPVYAGLYGIPYEEIPLDDDFSI 136 (353)
T ss_pred HHHHHHHHHhCCCHHHEEEcCCHHH--HHHHHHHHhc-----CCCCEEEEeCCCHHHHHHHHHHcCCEEEEeecCCCCCC
Confidence 6788888888887766655555541 3334444432 25688999987665666668899999999999888889
Q ss_pred CHHHHHHHHHhcCCCeEEEEEEcCC-ccccccccHHHHHHHHHHc-CCEEEEeccccccccCcCC-C--CccCCcEEEeC
Q 001586 716 NIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDN-GGQVYMDGANMNAQVGLTS-P--GYIGADVCHLN 790 (1049)
Q Consensus 716 D~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~~di~eI~~lah~~-G~ll~vD~A~~~a~~gl~~-P--g~~GaDi~~~s 790 (1049)
|+++|++ ++++|++++|+ .+|.+. +.+++.++++.+ |+++++|.++.. +.+-.. + ....-.+++.+
T Consensus 137 d~~~l~~-------~~~~v~~~~P~NPtG~~~-~~~~~~~l~~~~~~~~livDe~y~~-~~~~~~~~~~~~~~~~i~~~S 207 (353)
T PRK05387 137 DVEDYLR-------PNGGIIFPNPNAPTGIAL-PLAEIERILAANPDSVVVIDEAYVD-FGGESAIPLIDRYPNLLVVQT 207 (353)
T ss_pred CHHHHHh-------cCCEEEEeCCCCCCCCCC-CHHHHHHHHHhCCCcEEEEeCcccc-cCCcchHHHHhhCCCEEEEEe
Confidence 9998863 23568889995 599997 688999988876 999999998632 222110 1 11233578888
Q ss_pred CCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHH
Q 001586 791 LHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTE 870 (1049)
Q Consensus 791 ~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~ 870 (1049)
++|+|++| |.++|++++++++.+.+... + ......+.+..++. ++..++. ..+.+++
T Consensus 208 ~SK~~~~~----GlR~G~~~~~~~~~~~l~~~------------~-~~~~~~~~~~~~q~----~~~~~l~--~~~~~~~ 264 (353)
T PRK05387 208 FSKSRSLA----GLRVGFAIGHPELIEALNRV------------K-NSFNSYPLDRLAQA----GAIAAIE--DEAYFEE 264 (353)
T ss_pred hhHhhcch----hhhceeeecCHHHHHHHHHh------------h-ccCCCCCcCHHHHH----HHHHHhc--CHHHHHH
Confidence 89988654 67899999887665443100 0 00001111111111 1222222 2334555
Q ss_pred HHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHHHCCcccCCCCCC-CCCEEEEE
Q 001586 871 ASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWP-VPGTLMIE 948 (1049)
Q Consensus 871 ~~~~~~~~a~yL~~~L~~~-~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~p-~~~~lri~ 948 (1049)
..++..++.+++.+.|+++ +.+ ++ +.+.+ +.+.++ +.+..+++++|.++||.+.....+ ..+++|++
T Consensus 265 ~~~~~~~~~~~l~~~L~~~g~~~-~~-~~~~~---~~~~~~------~~~~~~~~~~l~~~gi~v~~~~~~~~~~~iRis 333 (353)
T PRK05387 265 TRAKVIATRERLVEELEALGFEV-LP-SKANF---VFARHP------SHDAAELAAKLRERGIIVRHFNKPRIDQFLRIT 333 (353)
T ss_pred HHHHHHHHHHHHHHHHHHCCCeE-CC-CcCcE---EEEECC------CCCHHHHHHHHHHCCEEEEECCCCCCCCeEEEE
Confidence 6666777888999999875 332 22 11221 334443 356789999999999987543322 35789999
Q ss_pred ccCCCCHHHHHHHHHHHHHHHH
Q 001586 949 PTESESKEELDRYCDALISIRE 970 (1049)
Q Consensus 949 ~t~~~t~eeid~fv~aL~~i~~ 970 (1049)
+. +.+++++++++|++++.
T Consensus 334 ~~---~~~~~~~~~~~L~~~~~ 352 (353)
T PRK05387 334 IG---TDEEMEALVDALKEILA 352 (353)
T ss_pred eC---CHHHHHHHHHHHHHHhh
Confidence 86 67999999999988753
No 274
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.63 E-value=7.2e-14 Score=165.07 Aligned_cols=288 Identities=16% Similarity=0.218 Sum_probs=184.1
Q ss_pred HHHHHHHHHhhC-CCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEE-EcCCCCCccHHHHHhcCC----------
Q 001586 635 NNLGEWLCTITG-FDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGM---------- 702 (1049)
Q Consensus 635 ~el~~~la~l~G-~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VL-ip~saHg~~pa~a~~~G~---------- 702 (1049)
.++.+.|+++++ ++. .++.+||+++++++++.+|.|. +|.+|| ...++||....+....|.
T Consensus 96 ~~la~~l~~~~p~~~~-v~f~~sGseA~e~AlklAr~~t------gr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~ 168 (428)
T PRK12389 96 IEFAKMLKEAIPSLEK-VRFVNSGTEAVMTTIRVARAYT------GRTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDS 168 (428)
T ss_pred HHHHHHHHHhCCCCcE-EEEeCCHHHHHHHHHHHHHHhh------CCCEEEEECCCcCCChHHHHHhcCCcccccCCCCC
Confidence 477788888774 333 4678999999999999998872 355666 678899976655433221
Q ss_pred ---------EEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-Cccccccc---cHHHHHHHHHHcCCEEEEeccc
Q 001586 703 ---------KIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDGAN 769 (1049)
Q Consensus 703 ---------~Vv~V~~d~~g~iD~~~L~~~i~~~~~~taaV~it~P-n~~G~i~~---di~eI~~lah~~G~ll~vD~A~ 769 (1049)
++..+|. .|+++|+++++++.+++++|+++.. +..|++.+ .+++|.++|+++|+++++|+++
T Consensus 169 ~~~~~~~~~~~~~~~~-----~d~~~l~~~l~~~~~~vaavi~EPv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~ 243 (428)
T PRK12389 169 AGVPKSIAQEVITVPF-----NDIEALKEALDKWGDEVAAVLVEPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVI 243 (428)
T ss_pred CCCCCcccCceEEcCC-----CCHHHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccc
Confidence 1222222 3789999999877778999988754 45677762 2999999999999999999974
Q ss_pred cccccCcCCCC--------ccCCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCC
Q 001586 770 MNAQVGLTSPG--------YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGT 841 (1049)
Q Consensus 770 ~~a~~gl~~Pg--------~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~ 841 (1049)
.|+ +.+ ..-+|++++ .|.+ ++|-| +|.+++++++++.+... +. ..
T Consensus 244 ----tG~-Rt~~~~a~~~~gv~PDivt~--gK~l----ggG~P-i~av~~~~~i~~~~~~~--~~-------------~~ 296 (428)
T PRK12389 244 ----TAF-RFMYGGAQDLLGVEPDLTAL--GKII----GGGLP-IGAYGGRKDIMEQVAPL--GP-------------AY 296 (428)
T ss_pred ----ccc-ccCcchhhHHhCCCCCeeee--chhh----cCCCc-eeEEeEHHHHHhhhccC--CC-------------cc
Confidence 444 222 124688766 4766 44545 45557788777665310 00 01
Q ss_pred CCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc---CCee--eccCCCceeeEEEEeccCccc--
Q 001586 842 IAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRGLKN-- 914 (1049)
Q Consensus 842 i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~---~~v~--~~g~~g~~~~e~iv~~~~~~~-- 914 (1049)
..+++.|+++.++++.+.|..+.++++. ++..++.++|+++|+++ +.+. ..+-.+ .+ .+.+..++...
T Consensus 297 ~~~T~~gnpl~~Aaala~L~~l~~~~l~---~~~~~~g~~l~~~L~~l~~~~~~~~~v~r~~g-~~-gi~~~~~~~~~~~ 371 (428)
T PRK12389 297 QAGTMAGNPASMAAGIACLEVLQQEGVY---EKLDRLGAMLEEGILEAAEKHGITITINRLKG-AL-TVYFTDEKVTNYD 371 (428)
T ss_pred cccCCccCHHHHHHHHHHHHHHhcccHH---HHHHHHHHHHHHHHHHHHHhCCCCEEEEecCc-EE-EEEEeCCCCCChh
Confidence 1122446778888888999988776644 44557788999998864 3321 111112 21 12222111000
Q ss_pred --c--CCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEccCCCCHHHHHHHHHHHHHHHHH
Q 001586 915 --T--AGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREE 971 (1049)
Q Consensus 915 --~--~g~~~~~v~k~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~eeid~fv~aL~~i~~~ 971 (1049)
. .......+.+.|.++|+.+..... +. +.|+..+|++|||++++++.+++++
T Consensus 372 ~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~---~~--~~~~l~~t~e~id~~~~~l~~~l~~ 427 (428)
T PRK12389 372 QAERSDGEAFGKFFKLMLNQGINLAPSKY---EA--WFLTTAHTEEDIEETLEAVDRAFAQ 427 (428)
T ss_pred hhcccCHHHHHHHHHHHHHCCcEeecCCC---CC--eeecCCCCHHHHHHHHHHHHHHHHh
Confidence 0 000135678889999998754321 22 2467788999999999999988754
No 275
>PRK07480 putative aminotransferase; Validated
Probab=99.63 E-value=1.3e-13 Score=163.60 Aligned_cols=308 Identities=19% Similarity=0.213 Sum_probs=191.3
Q ss_pred HHHHHHHHHHHhhCCCc-cccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEE-EcCCCCCccHHHHHhcCC--------
Q 001586 633 MFNNLGEWLCTITGFDS-FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGM-------- 702 (1049)
Q Consensus 633 ~i~el~~~la~l~G~~~-~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VL-ip~saHg~~pa~a~~~G~-------- 702 (1049)
...++.++|+++++.+. -.++.+||+++++++++.+|.|...+|.++|++|| ...++||..-......|.
T Consensus 95 ~~~~lae~L~~~~p~~~~~v~f~~SGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~tl~a~s~~g~~~~~~~~~ 174 (456)
T PRK07480 95 PAIELAAKLAEVAPPGFNHVFFTNSGSEANDTVLRMVRHYWALKGKPQKKVIISRKNGYHGSTVAGASLGGMKYMHEQGD 174 (456)
T ss_pred HHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhhccCChhhhcccC
Confidence 34578888999885322 24678999999999999999987666655567777 577899976443222211
Q ss_pred ----EEEEEcCCCC------CC------CCHHHHHHHHH-hcCCCeEEEEEEcC-Cccccccc---cHHHHHHHHHHcCC
Q 001586 703 ----KIVSVGTDAK------GN------INIEELRKAAE-ANRDNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGG 761 (1049)
Q Consensus 703 ----~Vv~V~~d~~------g~------iD~~~L~~~i~-~~~~~taaV~it~P-n~~G~i~~---di~eI~~lah~~G~ 761 (1049)
.+..++.... .. ..+++|++.+. .+.+++++|+++.. ...|++.+ .+++|.++|++||+
T Consensus 175 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~ 254 (456)
T PRK07480 175 LPIPGIVHIDQPYWFGEGGDMTPEEFGLAAARQLEAKILELGADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKYDI 254 (456)
T ss_pred CCCCCCeecCCCcccccccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCC
Confidence 1223332110 00 01366665553 33468999988765 34577653 39999999999999
Q ss_pred EEEEeccccccccCcCCCCcc--------CCcEEEeCCCcccccCCCCCC-CceeEEEEcccccccCCCCccccCCCCCC
Q 001586 762 QVYMDGANMNAQVGLTSPGYI--------GADVCHLNLHKTFCIPHGGGG-PGMGPIGVKKHLAPFLPSHPVVSTGGIPA 832 (1049)
Q Consensus 762 ll~vD~A~~~a~~gl~~Pg~~--------GaDi~~~s~hK~f~~P~g~GG-Pg~G~i~~~~~l~~~lpg~~vg~t~~~~~ 832 (1049)
++|+|++ +.|+.+.|.+ -+|++++ .|.++ +|- | +|.++++++++..+.... +.
T Consensus 255 llI~DEV----~tGfGRtG~~~a~~~~gv~PDiv~~--gK~l~----gG~~P-i~av~~~~~i~~~~~~~~-~~------ 316 (456)
T PRK07480 255 LLVADEV----ICGFGRTGEWFGSQHFGIKPDLMTI--AKGLT----SGYIP-MGAVGVGDRVAEVLIEEG-GE------ 316 (456)
T ss_pred EEEEech----hhCCCcCcchhhhhhcCCCCCeeee--ehhhc----cCCcc-ceEEEEcHHHHHHHhcCC-CC------
Confidence 9999987 4566666543 3688877 48663 332 4 555666777665441100 00
Q ss_pred CCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc--CCee--eccCCCceeeEEEEe
Q 001586 833 PEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPIL--FRGVNGTVAHEFIVD 908 (1049)
Q Consensus 833 ~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~--~~v~--~~g~~g~~~~e~iv~ 908 (1049)
....+++.|+++.++++.+.|..+-++++.+.++ ..+.++|.++|+++ +.++ +.|. |. +..+-+.
T Consensus 317 -------~~~~~T~~gnpl~~Aaa~a~L~~l~~~~l~~~~~--~~~g~~l~~~l~~l~~~~~i~~vrG~-Gl-m~gie~~ 385 (456)
T PRK07480 317 -------FNHGFTYSGHPVAAAVALANLRILRDEGIVERVR--DDTGPYLQKRLRELADHPLVGEVRGV-GL-VGAIELV 385 (456)
T ss_pred -------cccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHH--HHHHHHHHHHHHHhhcCCCeeeEEee-cc-eEEEEEe
Confidence 0011124467788888999999987777554331 24567777777663 2221 1232 32 2222221
Q ss_pred ccCccccC--CC--CHHHHHHHHHHCCcccCCCCCCCCCEEEEEccCCCCHHHHHHHHHHHHHHHHHHH
Q 001586 909 LRGLKNTA--GI--EPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIA 973 (1049)
Q Consensus 909 ~~~~~~~~--g~--~~~~v~k~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~eeid~fv~aL~~i~~~i~ 973 (1049)
-+.-.+.. .. ....+.+++.++|+.+... .+.++++|+...|++|||+++++|.+++.++.
T Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~----~~~l~~~Ppl~it~~eid~~~~~l~~al~~~~ 450 (456)
T PRK07480 386 KDKATRERFEAGGGVGTICRDHCFANGLIMRAV----GDRMIISPPLVITHAEIDELVEKARKALDATA 450 (456)
T ss_pred ccccccccCcchhhHHHHHHHHHHHCCcEEeec----CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 11000000 00 1246777888999987532 47899999999999999999999999988763
No 276
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.63 E-value=4.1e-14 Score=164.31 Aligned_cols=213 Identities=16% Similarity=0.121 Sum_probs=151.0
Q ss_pred HHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHH----HHhcCCEEEEEcCC
Q 001586 635 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGTD 710 (1049)
Q Consensus 635 ~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~----a~~~G~~Vv~V~~d 710 (1049)
.++++.++++.|.+.+ +...+|..|..++++++. +++|+||+++..++..... ....|++++.++.+
T Consensus 64 ~~Le~~iA~le~~~~~-~~~~sG~~Ai~~~l~all--------~~GD~Vvv~~~~Y~~t~~l~~~~l~~~Gi~v~~v~~~ 134 (394)
T PRK09028 64 FAFQAAIVELEGGAGT-ALYPSGAAAISNALLSFL--------KAGDHLLMVDSCYEPTRDLCDKILKGFGIETTYYDPM 134 (394)
T ss_pred HHHHHHHHHHhCCCcE-EEECCHHHHHHHHHHHHh--------CCCCEEEEECCCcHHHHHHHHHhhhhcceEEEEECCC
Confidence 3678899999887654 455667766655554432 2578999988766443322 34578998887752
Q ss_pred CCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-ccccccccHHHHHHHHHHcCCEEEEeccccccccCcCCCCccCCcEEEe
Q 001586 711 AKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHL 789 (1049)
Q Consensus 711 ~~g~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~Pg~~GaDi~~~ 789 (1049)
|.++++++++ ++|++|++++|+ .+|.+. |+++|+++||++|++++||+++.. +....|.++|+|+++.
T Consensus 135 -----~~e~l~~~l~---~~TklV~lespsNPtg~v~-dl~~I~~la~~~g~~lvvD~t~a~--p~~~~Pl~~GaDivv~ 203 (394)
T PRK09028 135 -----IGEGIRELIR---PNTKVLFLESPGSITMEVQ-DVPTLSRIAHEHDIVVMLDNTWAS--PINSRPFEMGVDISIQ 203 (394)
T ss_pred -----CHHHHHHhcC---cCceEEEEECCCCCCCcHH-HHHHHHHHHHHcCCEEEEECCccc--cccCCccccCceEEEE
Confidence 5688999886 789999999995 588887 899999999999999999998643 2346889999999999
Q ss_pred CCCcccccCCCCCCCc---eeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchh
Q 001586 790 NLHKTFCIPHGGGGPG---MGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSK 866 (1049)
Q Consensus 790 s~hK~f~~P~g~GGPg---~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~e 866 (1049)
|.|||++ |++ +|+++.++++.+.+-. . ...++.+.+ |+ -+|+...|-+
T Consensus 204 S~tK~l~------Gh~d~~~G~~~~~~~~~~~l~~----~---------~~~~G~~~~-p~---------~a~l~~rgl~ 254 (394)
T PRK09028 204 AATKYIV------GHSDVMLGTATANEKHWDQLRE----H---------SYLMGQCTS-PD---------DVYLAMRGLR 254 (394)
T ss_pred eCCeEec------CCCCEEEEEEECCHHHHHHHHH----H---------HHhcCCCCC-HH---------HHHHHHcccC
Confidence 9999995 443 5766655544332210 0 001122111 11 2456677778
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcc---CCeeecc
Q 001586 867 GLTEASKIAILNANYMAKRLEKH---YPILFRG 896 (1049)
Q Consensus 867 Gl~~~~~~~~~~a~yL~~~L~~~---~~v~~~g 896 (1049)
.|.-+.++..++|..+++.|+++ .+|.|+|
T Consensus 255 TL~lR~~~~~~na~~la~~L~~~p~v~~V~yPg 287 (394)
T PRK09028 255 TLGVRLAQHEKNALKVANWLATRPEVDHVRHPA 287 (394)
T ss_pred cHHHHHHHHHHHHHHHHHHHhcCCCccEEECCC
Confidence 88888999999999999999986 3566765
No 277
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.63 E-value=1.7e-13 Score=162.66 Aligned_cols=318 Identities=19% Similarity=0.191 Sum_probs=194.3
Q ss_pred HHHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCEEEEEcCCC--
Q 001586 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA-- 711 (1049)
Q Consensus 634 i~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~Vv~V~~d~-- 711 (1049)
+.++++.+++++|.+.+ +...+|++|+..+++++. .++| |+++...+.++.....+.|.+++.+++++
T Consensus 80 ~~~Lreaia~~~~~~~v-v~t~ggt~A~~~~~~all--------~pGD-Vii~~p~~~~~~~~i~~~G~~~v~v~~~~~~ 149 (460)
T PRK13238 80 YYRLEDAVKDIFGYPYT-IPTHQGRAAEQILFPVLI--------KKGD-VVPSNYHFDTTRAHIELNGATAVDLVIDEAL 149 (460)
T ss_pred HHHHHHHHHHHhCCCcE-EECCCHHHHHHHHHHHhC--------CCCC-EEccCCcccchHHHHHHcCCEEEEEeccccc
Confidence 44778899999998764 556677777754444331 2577 88877655555566788999999999853
Q ss_pred --------CCCCCHHHHHHHHHhcC-CCeEEEEEEcCC-ccc-ccc--ccHHHHHHHHHHcCCEEEEeccccc--ccc--
Q 001586 712 --------KGNINIEELRKAAEANR-DNLSTLMVTYPS-THG-VYE--EGIDEICKIIHDNGGQVYMDGANMN--AQV-- 774 (1049)
Q Consensus 712 --------~g~iD~~~L~~~i~~~~-~~taaV~it~Pn-~~G-~i~--~di~eI~~lah~~G~ll~vD~A~~~--a~~-- 774 (1049)
.|.+|+++|+++|+++. ++|++|++++|+ .+| ..- .++++|+++|++||++|++|+|+.. +..
T Consensus 150 ~~~~~~~f~g~id~e~Le~~i~~~~~~~tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~ 229 (460)
T PRK13238 150 DTGSRHPFKGNFDLEKLEALIEEVGAENVPFIVMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENAYFIK 229 (460)
T ss_pred cccccccccCCcCHHHHHHHHhhcCCCceeEEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhh
Confidence 25699999999998543 479999999995 466 332 2589999999999999999998742 111
Q ss_pred ----Cc--CCCCc------cCCcEEEeCCCcccccCCCCCCCceeEEEEcc-cccccCCCCccccCCCCCCCCCCCCCCC
Q 001586 775 ----GL--TSPGY------IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKK-HLAPFLPSHPVVSTGGIPAPEKSQPLGT 841 (1049)
Q Consensus 775 ----gl--~~Pg~------~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~-~l~~~lpg~~vg~t~~~~~~~~~~~t~~ 841 (1049)
+. .+.++ ..+|++++++||.+. +|..|++++++ ++...+....+.. ++. .+.
T Consensus 230 ~~e~g~~~~si~~i~~~~~s~~D~~~~Sg~K~g~------~~~GG~i~~~d~~l~~~~~~~~~~~------~g~--~t~- 294 (460)
T PRK13238 230 QREPGYKDKSIKEIAREMFSYADGLTMSAKKDAM------VNIGGLLCFRDEDLFTECRTLCILY------EGF--PTY- 294 (460)
T ss_pred hccccccCCCHHHHhhhhcccCcEEEEecccCCC------CcceeEEEcChHHHHHHhhhccccc------CCc--ccc-
Confidence 11 11111 247999999999763 45458898884 6665543211100 000 001
Q ss_pred CCccchhhHHHHHHH-HHHH-HHHchhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeEEEEeccCccc---c
Q 001586 842 IAAAPWGSALILPIS-YTYI-AMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKN---T 915 (1049)
Q Consensus 842 i~sa~~g~~~~~~~a-~a~l-~~lG~eGl~~~~~~~~~~a~yL~~~L~~~-~~v~~~g~~g~~~~e~iv~~~~~~~---~ 915 (1049)
+ |.+.....| ...+ ..+..+-+ +....++++|.+.|++. +++.. +.|. |-+.+|+..+.. .
T Consensus 295 -~----g~~~~~~~Ala~~l~e~~~~~~~----~~~~~~~~~l~~~L~~~G~~~~~--p~Gg--~~v~~d~~~~~~~~~~ 361 (460)
T PRK13238 295 -G----GLAGRDMEALAVGLYEGMDEDYL----AYRIGQVEYLGEGLEEAGVPIQT--PAGG--HAVFVDAGKFLPHIPA 361 (460)
T ss_pred -c----CcHHHHHHHHHhhHHHhhChHHH----HHHHHHHHHHHHHHHHCCCCeEc--cCCc--eEEEEEchhcCCCCCC
Confidence 1 111111111 1122 22222222 22334678999999875 66542 3332 336677754321 1
Q ss_pred CCCCHHHHHHHHH-HCCccc-CC--CCCC-----------CCCEEEEEccC-CCCHHHHHHHHHHHHHHHHHHHHhhcCC
Q 001586 916 AGIEPEDVAKRLM-DYGFHG-PT--MSWP-----------VPGTLMIEPTE-SESKEELDRYCDALISIREEIAQIENGK 979 (1049)
Q Consensus 916 ~g~~~~~v~k~L~-~~Gi~~-~~--~~~p-----------~~~~lri~~t~-~~t~eeid~fv~aL~~i~~~i~~i~~g~ 979 (1049)
.+.+..+++.+|. +.||.+ +. ..++ ....+|+++.- .-|.+.+|..++.|+.+.+.-..|..=+
T Consensus 362 ~~~~~~~~a~~L~~e~GV~~~~~~~f~~~~~~~~~~~~~~~~~~~Rla~~rr~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 441 (460)
T PRK13238 362 EQFPAQALACELYLEAGIRGVEIGSLLLGRDPKTGEQLPAPAELLRLAIPRRVYTQSHMDYVAEALKAVKENRESIKGLR 441 (460)
T ss_pred CCCchHHHHHHHHHHcCeeeecccceecccCCCCccccCCccceEEEecccccCCHHHHHHHHHHHHHHHHhHhhcCCeE
Confidence 1223467787766 679875 22 1111 13689999874 2388999999999999887766553222
Q ss_pred CCCCCccccc
Q 001586 980 ADIHNNVLKV 989 (1049)
Q Consensus 980 ~~~~~~~l~~ 989 (1049)
+..+|..|++
T Consensus 442 ~~~~~~~~r~ 451 (460)
T PRK13238 442 FTYEPPVLRH 451 (460)
T ss_pred EeecCcccee
Confidence 3444555443
No 278
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.63 E-value=5.1e-14 Score=163.61 Aligned_cols=212 Identities=17% Similarity=0.167 Sum_probs=150.9
Q ss_pred HHHHHHHHHHHhCCCCcceEeccchHHHHHHHHHHhhhccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCcc---
Q 001586 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK--- 289 (1049)
Q Consensus 213 l~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a~~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~~~--- 289 (1049)
..++++.+|++.|.+. +.++.+|++++.+++.. .. +||+||+++..|+.+...+...++..|++++++|..
T Consensus 52 ~~~Le~~la~l~g~~~--al~~~SG~~Al~~~l~~--l~--pGd~Vi~~~~~y~~t~~~~~~~~~~~gi~v~~vd~~d~e 125 (380)
T PRK06176 52 RFALEELIADLEGGVK--GFAFASGLAGIHAVFSL--FQ--SGDHVLLGDDVYGGTFRLFDKVLVKNGLSCTIIDTSDLS 125 (380)
T ss_pred HHHHHHHHHHHhCCCC--EEEECCHHHHHHHHHHH--cC--CCCEEEEcCCChhHHHHHHHHHHHhcCeEEEEcCCCCHH
Confidence 3457789999999876 56778888888754432 23 899999999999999988887778899999998764
Q ss_pred hhhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCCC
Q 001586 290 DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYG 366 (1049)
Q Consensus 290 ~l~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~p~~~GaDivvgs~-k~lg~P~~~G 366 (1049)
++++ ++++|++|++++| |++|.+.|+++|+++||++|++++|+ +..+.+....|.++|+|++++|. |.+++|-
T Consensus 126 ~l~~ai~~~t~lV~lesP~Nptg~~~di~~I~~la~~~gi~vivD-~t~a~~~~~~p~~~gaDivv~S~tK~l~g~~--- 201 (380)
T PRK06176 126 QIKKAIKPNTKALYLETPSNPLLKITDLAQCASVAKDHGLLTIVD-NTFATPYYQNPLLLGADIVVHSGTKYLGGHS--- 201 (380)
T ss_pred HHHHhcCcCceEEEEECCCCCCceecCHHHHHHHHHHcCCEEEEE-CCccccccCCccccCCCEEEecCceeccCCc---
Confidence 4555 7889999999998 68999999999999999999999995 45555555667789999999998 7665432
Q ss_pred CCceEEEEEch-hHHhcCCCceeeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcchHHH
Q 001586 367 GPHAAFLATSQ-EYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKT 445 (1049)
Q Consensus 367 GP~~G~l~~~~-~l~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irrekaTsni~t~~~l~a~~aa~y~~~~g~~Gl~~ 445 (1049)
..-+|++.+++ ++..++. ..|+.-|. .. .+. ..|+...|.+.+..
T Consensus 202 d~~gG~vv~~~~~~~~~~~-------------------------~~~~~~G~--~~--~~~-----~~~l~~~gl~tl~~ 247 (380)
T PRK06176 202 DVVAGLVTTNNEALAQEIA-------------------------FFQNAIGG--VL--GPQ-----DSWLLQRGIKTLGL 247 (380)
T ss_pred cceeeEEEecHHHHHHHHH-------------------------HHHHHhcC--CC--CHH-----HHHHHHhccCcHHH
Confidence 11256776654 3332220 00111010 00 011 11334455666677
Q ss_pred HHHHHHHHHHHHHHHhhcCCCeE
Q 001586 446 IAQRVHGLAGTFALGLKKLGTVE 468 (1049)
Q Consensus 446 ia~~~~~~a~~l~~~L~~~g~~~ 468 (1049)
..++..+++..+++.|++...+.
T Consensus 248 R~~~~~~~a~~la~~L~~~p~v~ 270 (380)
T PRK06176 248 RMEAHQKNALCVAEFLEKHPKVE 270 (380)
T ss_pred HHHHHHHHHHHHHHHHHhCCCee
Confidence 77778888999999998874353
No 279
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.63 E-value=1.9e-13 Score=162.11 Aligned_cols=297 Identities=15% Similarity=0.159 Sum_probs=185.4
Q ss_pred HHHHHHHHHHhhCCC----ccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEE-EcCCCCCccHHHHHhcC-------
Q 001586 634 FNNLGEWLCTITGFD----SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCG------- 701 (1049)
Q Consensus 634 i~el~~~la~l~G~~----~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VL-ip~saHg~~pa~a~~~G------- 701 (1049)
..++.+.|+++++.. ...++.+||+++++++++.+|.| . +|++|| ...+.||....+....|
T Consensus 84 ~~~lae~L~~~~p~~~~~~~~~f~~~sGsEA~e~AlklAr~~---t---gr~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~ 157 (442)
T TIGR00709 84 KDAFIEALLNIIPKRKMDYKLQFPGPSGADAVEAAIKLAKTY---T---GRTNVISFSGGFHGMTIGALAVTGNLFAKNA 157 (442)
T ss_pred HHHHHHHHHHhCCCcCCCccEEEeCCCHHHHHHHHHHHHHHh---c---CCCeEEEEcCCcCCchHHHHhhcCChhhhcc
Confidence 447888999988532 22456689999999999998887 2 345566 68889998776654332
Q ss_pred -----CEEEEEcCCCCCCC--------CH----HHHHHHHHh---cCCCeEEEEEEcC-Ccccccc---ccHHHHHHHHH
Q 001586 702 -----MKIVSVGTDAKGNI--------NI----EELRKAAEA---NRDNLSTLMVTYP-STHGVYE---EGIDEICKIIH 757 (1049)
Q Consensus 702 -----~~Vv~V~~d~~g~i--------D~----~~L~~~i~~---~~~~taaV~it~P-n~~G~i~---~di~eI~~lah 757 (1049)
..+..++.....+. +. +.+++.+++ ..+++++|+++.. +..|++. ..+++|+++|+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~ 237 (442)
T TIGR00709 158 VGMLMPGVQFMPYPHEYRCPFGIGGEAGSNASIEYFENFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTR 237 (442)
T ss_pred CCCCCCCcEEeCCCccccccccCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHH
Confidence 12344444221111 11 223444431 2257889888765 3456553 25999999999
Q ss_pred HcCCEEEEeccccccccCcCCCCcc--------CCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCC
Q 001586 758 DNGGQVYMDGANMNAQVGLTSPGYI--------GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGG 829 (1049)
Q Consensus 758 ~~G~ll~vD~A~~~a~~gl~~Pg~~--------GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~ 829 (1049)
+||+++++|++ +.|+.+.|.+ -+|++++ .|.++ +| -.+|.+.+++++..+.+..
T Consensus 238 ~~g~llI~DEV----~tGfGRtG~~~a~~~~gv~PDiv~~--gK~l~----~G-~Pigav~~~~~~~~~~~~~------- 299 (442)
T TIGR00709 238 KHDIKLILDEV----QAGFGRSGTMFAFEHAGIEPDFVVM--SKAVG----GG-LPLAVLLIAPEFDAWQPAG------- 299 (442)
T ss_pred HcCCEEEEecc----ccCCCCCCchhHHHHcCCCCcEEEE--ccccc----CC-cccEEEEEchHHhccCCCc-------
Confidence 99999999987 4566555533 3699886 47763 44 4577777776643222110
Q ss_pred CCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc---CCee--eccCCCceeeE
Q 001586 830 IPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHE 904 (1049)
Q Consensus 830 ~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~---~~v~--~~g~~g~~~~e 904 (1049)
+ + +++.|+++.++++.+.|..+.++++.+ +..++.++|.++|+++ +.++ +.|. |. +..
T Consensus 300 ---~------~---~T~~gnpla~aaa~a~L~~i~~~~l~~---~~~~~g~~l~~~L~~l~~~~~~v~~vrG~-Gl-~~~ 362 (442)
T TIGR00709 300 ---H------T---GTFRGNQLAMVTGTEALNYWKDDNLAQ---NAQERGERITSFLDDMIKEHPCIGNVRGR-GL-MQG 362 (442)
T ss_pred ---C------C---CCCCcCHHHHHHHHHHHHHHHhcCHHH---HHHHHHHHHHHHHHHHHHhCCCeeeeecc-ce-EEE
Confidence 0 1 123356777778888888887776654 4456778888888764 3322 1221 32 222
Q ss_pred EEEecc-Cccc-----cCCC-CHHHHHHHHHHCCcccCCCCCCCCCEEEEEccCCCCHHHHHHHHHHHHHHHHHH
Q 001586 905 FIVDLR-GLKN-----TAGI-EPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEI 972 (1049)
Q Consensus 905 ~iv~~~-~~~~-----~~g~-~~~~v~k~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~eeid~fv~aL~~i~~~i 972 (1049)
+-+.-+ .-+. .... ....+.+.+.++|+.+..... .++++++.|+...|++|+|.++++|.+++.++
T Consensus 363 ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~-~~~~l~~~Ppl~it~~ei~~~~~~l~~~l~~~ 436 (442)
T TIGR00709 363 IMIVDERQSKDATGAYPRDCELAAAIQGACFENGLLLETGGR-EGEVFRLLCPITIDQEECEEGISRFKQAVEEA 436 (442)
T ss_pred EEEccCcccccccccCCcchHHHHHHHHHHHHCCeEEeecCC-CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 222111 0000 0000 134677788899998743211 14789999999999999999999999988765
No 280
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.63 E-value=5.8e-14 Score=164.25 Aligned_cols=272 Identities=19% Similarity=0.188 Sum_probs=180.0
Q ss_pred HHHHHHHHHHhCCCCcceEeccchHHHHHHHHHHhhhccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc---ch
Q 001586 214 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---KD 290 (1049)
Q Consensus 214 ~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a~~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~~---~~ 290 (1049)
.++++.+|++.|++.+. .+.+|++++.+++++. .. +||+||+++..|+++...++..++..|++++.++. ++
T Consensus 68 ~~Le~~lA~l~G~~~~~--~~~sG~~Ai~~~l~~~-l~--~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~d~e~ 142 (398)
T PRK07504 68 DMFEKRMCALEGAEDAR--ATASGMAAVTAAILCQ-VK--AGDHVVAARALFGSCRYVVETLLPRYGIESTLVDGLDLDN 142 (398)
T ss_pred HHHHHHHHHHhCCCeee--EecCHHHHHHHHHHHH-hC--CCCEEEEcCCchhHHHHHHHHHHhhcCeEEEEECCCCHHH
Confidence 45678999999998754 4678887776555443 23 88999999999999888887767778999999874 45
Q ss_pred hhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCCCC
Q 001586 291 IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGG 367 (1049)
Q Consensus 291 l~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~p~~~GaDivvgs~-k~lg~P~~~GG 367 (1049)
+++ ++++|++|++++| |++|.+.|+++|.++||++|++++|+ +.++.+....|.++|+|++++|. |.|+++ |.
T Consensus 143 l~~ai~~~tklV~lesp~NptG~v~dl~~I~~la~~~gi~lvvD-~a~a~~~~~~~~~~gaDivv~S~sK~l~g~---g~ 218 (398)
T PRK07504 143 WEKAVRPNTKVFFLESPTNPTLEVIDIAAVAKIANQAGAKLVVD-NVFATPLFQKPLELGAHIVVYSATKHIDGQ---GR 218 (398)
T ss_pred HHHhcCcCceEEEEECCCCCCcEecCHHHHHHHHHHcCCEEEEE-CCccccccCCchhhCCCEEEeeccccccCC---cc
Confidence 555 7889999999998 78999999999999999999999994 45566666677889999999998 777542 22
Q ss_pred CceEEEEEchhHHhc-CCCceeeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcchHHHH
Q 001586 368 PHAAFLATSQEYKRM-MPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTI 446 (1049)
Q Consensus 368 P~~G~l~~~~~l~~~-lpgrivG~s~d~~g~~~~~l~lqtreq~irrekaTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i 446 (1049)
.-+|++..+++.+.+ +. ...+..|. . ..+. .|+ +...+.+-+...
T Consensus 219 ~~GG~vv~~~~~i~~~~~-------------------------~~~~~~g~-~---~s~~---~A~--~~l~~L~tl~~R 264 (398)
T PRK07504 219 CLGGVVLSDKAWIEEHLQ-------------------------DYFRHTGP-S---LSPF---NAW--TLLKGLETLPVR 264 (398)
T ss_pred ceEEEEEeCcHHHHHHHH-------------------------HHHHHhCC-C---CCHH---HHH--HHHhccchHHHH
Confidence 234677666554321 10 00011110 0 0111 122 234455556666
Q ss_pred HHHHHHHHHHHHHHhhcCCCeE-EcCC-----C-----------CcceEEEecCC----HHHHHHHHHHcCC--eee---
Q 001586 447 AQRVHGLAGTFALGLKKLGTVE-VQGL-----P-----------FFDTVKVKCAD----AHAIASAAYKIEM--NLR--- 500 (1049)
Q Consensus 447 a~~~~~~a~~l~~~L~~~g~~~-v~~~-----~-----------~~~~v~i~~~~----~~~v~~~L~~~gI--~~~--- 500 (1049)
.++..+++..+++.|++..+++ |.-+ | +..-|+|.+.+ +..+.+.|.=..+ .++
T Consensus 265 ~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~~~~~l~~~~~~~slG~~~ 344 (398)
T PRK07504 265 VRQQTESAAAIADFLAGHPKVARVIYPGRADHPQADIIAKQMTGGSTLVAFELKGGKEAAFRFLNALKIVRISNNLGDAK 344 (398)
T ss_pred HHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHHhCCCCccEEEEEeCCCHHHHHHHHHhCCcceecccCCCCC
Confidence 7777899999999999875454 3211 1 12247777753 2344444432111 110
Q ss_pred ------------e----------ecCCeEEEEeccCCCHHHHHHHHHHHh
Q 001586 501 ------------V----------VDSNTVTASFDETTTLEDVDKLFIVFA 528 (1049)
Q Consensus 501 ------------~----------~~~~~vris~~~~~t~edid~lv~aL~ 528 (1049)
. +.++.||+|++.-+.++=|+.|.++|.
T Consensus 345 sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~al~ 394 (398)
T PRK07504 345 SLITHPATTTHKNLSPEARAELGISEGFLRLSAGLEDTDDLIEDLAAALK 394 (398)
T ss_pred eeeeCCCCCCcccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHH
Confidence 0 124679999998766555667766664
No 281
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.63 E-value=8.7e-14 Score=149.36 Aligned_cols=329 Identities=19% Similarity=0.273 Sum_probs=218.8
Q ss_pred HHHHHHHHHhccccCcCccccccccccccCcccccccc----ccCcccccCCCCCchhhhhcHHHHHHHHHHHHHHhhCC
Q 001586 572 ELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMP----VTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGF 647 (1049)
Q Consensus 572 e~~~~l~~l~~~d~~~~~~~i~lGs~t~~~~~~~~~~~----~~~~~f~~~~P~~p~e~~~G~~~~i~el~~~la~l~G~ 647 (1049)
|=.+|+.-|+.- +....|+|.+++-.....+. ++...| +.....++++.+.+++|+
T Consensus 57 eGk~ylDflsay------saVnqGhchpki~~aLqeq~~kLtlssraf--------------Ynd~~~~f~~~vt~lf~~ 116 (427)
T KOG1402|consen 57 EGKEYLDFLSAY------SAVNQGHCHPKIIKALQEQADKLTLSSRAF--------------YNDVLGEFAEYVTKLFGY 116 (427)
T ss_pred Cccchhhhhhhh------hhcccCCCCHHHHHHHHHHHhHhhhhhHHH--------------hhhhHHHHHHHHHHhcCc
Confidence 344666655542 22356888776644433331 111112 334566889999999999
Q ss_pred CccccccCchHHHHHHHHHHHHHHHH-hcCCCCCC-EEE-EcCCCCCcc---------HHHHHhcC----CEEEEEcCCC
Q 001586 648 DSFSLQPNAGAAGEYAGLMVIRAYHK-ARGDHHRN-VCI-IPVSAHGTN---------PATAAMCG----MKIVSVGTDA 711 (1049)
Q Consensus 648 ~~~~l~~~sGa~ge~a~l~air~y~~-~~G~~~r~-~VL-ip~saHg~~---------pa~a~~~G----~~Vv~V~~d~ 711 (1049)
+.+ +..|.|++|.++++..+|.|.. .++.++.. +|| .-.+.||.. |.+-+.+| ..+..||+
T Consensus 117 ~kv-lpmnTGaEa~Eta~KLaR~wgy~~K~ip~nka~il~~~~nFhGrT~~ais~s~d~ds~~~fgp~~P~~~~~v~Y-- 193 (427)
T KOG1402|consen 117 DKV-LPMNTGAEAVETACKLARKWGYRKKNIPKNKAKILSAENNFHGRTLGAISLSTDPDSWDGFGPFLPGVVDKVPY-- 193 (427)
T ss_pred cee-eecccchhHHHHHHHHHHHHHHhhccCCccceeEEEecccccCceeeeEEecCCcchhhccCCCCCCcceeecc--
Confidence 985 5578899999999999997754 34443222 333 457778753 32222222 12556666
Q ss_pred CCCCCHHHHHHHHHhcCCCeEEEEEEcC-Cccccccc---cHHHHHHHHHHcCCEEEEeccccccccCcCCCCcc-----
Q 001586 712 KGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI----- 782 (1049)
Q Consensus 712 ~g~iD~~~L~~~i~~~~~~taaV~it~P-n~~G~i~~---di~eI~~lah~~G~ll~vD~A~~~a~~gl~~Pg~~----- 782 (1049)
-|.++|+.+++ .++++++|++.- ..-|++.| .++++.++|.+|+.+++.|+. |.|+.+.|++
T Consensus 194 ---~d~eale~~l~--~~~vaaFivEPIQGEaGVvvP~~GYL~~vreLCtkynvl~I~DEv----QTGl~RTGk~la~d~ 264 (427)
T KOG1402|consen 194 ---GDAEALEVALK--SPNVAAFIVEPIQGEAGVVVPPPGYLKKVRELCTKYNVLLIADEV----QTGLARTGKLLACDY 264 (427)
T ss_pred ---CCHHHHHHHhc--CCCeeEEEeeccccccceEeCCchhHHHHHHHHHhhcEEEEehhh----hhcccccCcEEEeeh
Confidence 48999999998 489999988865 45788864 389999999999999999986 6788888864
Q ss_pred ---CCcEEEeCCCcccccCCCCCC--CceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHH
Q 001586 783 ---GADVCHLNLHKTFCIPHGGGG--PGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISY 857 (1049)
Q Consensus 783 ---GaDi~~~s~hK~f~~P~g~GG--Pg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~ 857 (1049)
-+|++.+ .|.|+ || |-.++++-++-+..+-||. |+ +++.|+++.+..+.
T Consensus 265 env~PDivil--gKalS-----GG~~Pvsavl~~~~im~~~~pge----------Hg---------sTyggNpLg~~vai 318 (427)
T KOG1402|consen 265 ENVRPDIVIL--GKALS-----GGVYPVSAVLADDDIMLNIKPGE----------HG---------STYGGNPLGCAVAI 318 (427)
T ss_pred hhcCCCeEEE--ecccc-----CCeeeeEEEEecHHHHhccCCCc----------cc---------cccCCChHHHHHHH
Confidence 4799888 58874 44 4455555444344443432 21 11335667777778
Q ss_pred HHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc---C-Ce--eeccCCCceeeEEEEeccCccccCCCCHHHHHHHHHHCC
Q 001586 858 TYIAMMGSKGLTEASKIAILNANYMAKRLEKH---Y-PI--LFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYG 931 (1049)
Q Consensus 858 a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~---~-~v--~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~G 931 (1049)
|.|..+-++.|. +++..+...|+++|+++ + .+ ...|. | .++.++|+.. ++.+.++.+++-+|.+.|
T Consensus 319 Aalevi~eekL~---era~~lG~~l~~~L~~l~~~~p~~v~~VRGr-G-l~~ai~i~~~---~~~~~~aw~~cl~lk~~g 390 (427)
T KOG1402|consen 319 AALEVIVEEKLV---ERAAKLGEILRDQLNKLQKKFPHVVKEVRGR-G-LLNAIVINPS---KTSGQDAWDVCLALKENG 390 (427)
T ss_pred HHHHHHHHHHHH---HHHHHHHHHHHHHHHhccccccchhheeecc-c-eEEEEEeccc---cccchhHHHHHHcccccc
Confidence 888888776554 45556778899999875 2 11 12232 2 3344455532 123567889999999999
Q ss_pred cccCCCCCCCCCEEEEEccCCCCHHHHHHHHHHHHHHH
Q 001586 932 FHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIR 969 (1049)
Q Consensus 932 i~~~~~~~p~~~~lri~~t~~~t~eeid~fv~aL~~i~ 969 (1049)
..+.... .+.+|+.|...++++|++.-+++++..+
T Consensus 391 ~LAkptH---~~IiRfaPPL~I~e~dl~eg~e~i~k~i 425 (427)
T KOG1402|consen 391 LLAKPTH---GNIIRFAPPLVISEEDLREGIEAIEKTI 425 (427)
T ss_pred cccCCCC---CCeEEecCCcccCHHHHHHHHHHHHHHh
Confidence 9886433 4789999999999999999999987754
No 282
>PRK06207 aspartate aminotransferase; Provisional
Probab=99.63 E-value=1.1e-13 Score=162.79 Aligned_cols=303 Identities=14% Similarity=0.154 Sum_probs=188.8
Q ss_pred hcHHHHHHHHHHHHHHhhCCC--c-cccccCch-HHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCE
Q 001586 628 QGYQEMFNNLGEWLCTITGFD--S-FSLQPNAG-AAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMK 703 (1049)
Q Consensus 628 ~G~~~~i~el~~~la~l~G~~--~-~~l~~~sG-a~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~ 703 (1049)
+|..++.+.+.+++++..|.+ . ..+..++| .++.+. +++.+. .++|+|+++...+..+...++..|.+
T Consensus 78 ~G~~~LR~aia~~l~~~~g~~~~~~~~I~it~Ga~~al~~---~~~~l~-----~~Gd~Vlv~~P~y~~~~~~~~~~g~~ 149 (405)
T PRK06207 78 RGDADIRELLAARLAAFTGAPVDAADELIITPGTQGALFL---AVAATV-----ARGDKVAIVQPDYFANRKLVEFFEGE 149 (405)
T ss_pred CCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHHHHH---HHHHhc-----CCCCEEEEeCCCchhHHHHHHHcCCE
Confidence 466667777888888888853 2 33444444 444433 333321 25789999888776666778889999
Q ss_pred EEEEcCC-----CCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-cccccc--ccHHHHHHHHHHcCCEEEEecccccc-cc
Q 001586 704 IVSVGTD-----AKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMNA-QV 774 (1049)
Q Consensus 704 Vv~V~~d-----~~g~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~--~di~eI~~lah~~G~ll~vD~A~~~a-~~ 774 (1049)
++.++++ .+..+|+++|+++++ +++++|++++|+ .+|.+- +++++|+++|+++|+++++|.++..- ..
T Consensus 150 v~~v~~~~~~~~~~~~~d~~~l~~~~~---~~~k~v~l~~P~NPTG~~~s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~ 226 (405)
T PRK06207 150 MVPVQLDYLSADKRAGLDLDQLEEAFK---AGVRVFLFSNPNNPAGVVYSAEEIAQIAALARRYGATVIVDQLYSRLLYD 226 (405)
T ss_pred EEEEeccccCcccCCCcCHHHHHHhhh---hcCeEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccC
Confidence 9999885 246799999999997 678899999995 599875 25889999999999999999986421 11
Q ss_pred C--cCCCCccCC--c--EEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchh
Q 001586 775 G--LTSPGYIGA--D--VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWG 848 (1049)
Q Consensus 775 g--l~~Pg~~Ga--D--i~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g 848 (1049)
+ ......+.. | +++.|+.|+|++| |-++|++++++++...+... .....++.+.+.
T Consensus 227 ~~~~~~~~~~~~~~~~vi~i~SfSK~~~lp----GlRiG~ii~~~~l~~~~~~~--------------~~~~~~~~~~~~ 288 (405)
T PRK06207 227 GTSYTHLRALPIDPENVITIMGPSKTESLS----GYRLGVAFGSPAIIDRMEKL--------------QAIVSLRAAGYS 288 (405)
T ss_pred CCCCCchhcCCCCcCcEEEEecchhhccCc----ccceEEEEcCHHHHHHHHHH--------------HhHhccCCCHHH
Confidence 1 111111111 2 6777889998665 67899999887665543210 000111211111
Q ss_pred hHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHH
Q 001586 849 SALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM 928 (1049)
Q Consensus 849 ~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~ 928 (1049)
+. ++..++.. +..-+.+..+...++.+++.+.|+++..+.+..+.+..+ +.++++. .+.+..+++++|.
T Consensus 289 q~----a~~~~l~~-~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~gg~f--l~~~l~~----~~~~~~~~~~~l~ 357 (405)
T PRK06207 289 QA----VLRTWFSE-PDGWMKDRIARHQAIRDDLLRVLRGVEGVFVRAPQAGSY--LFPRLPR----LAVSLHDFVKILR 357 (405)
T ss_pred HH----HHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCeeEE--EEEeCcc----cCCCHHHHHHHHH
Confidence 11 12222221 211244455555667788888887642222222222222 4456542 1246788999987
Q ss_pred -HCCcccC-CCCC--CCCCEEEEEccCCCCHHHHHHHHHHHHHHHHHH
Q 001586 929 -DYGFHGP-TMSW--PVPGTLMIEPTESESKEELDRYCDALISIREEI 972 (1049)
Q Consensus 929 -~~Gi~~~-~~~~--p~~~~lri~~t~~~t~eeid~fv~aL~~i~~~i 972 (1049)
++|+.+. .-.| +..+++||++.. +.++++..++.|.+++++.
T Consensus 358 ~~~gV~v~pG~~F~~~~~~~~Ris~~~--~~~~l~~al~rl~~~l~~~ 403 (405)
T PRK06207 358 LQAGVIVTPGTEFSPHTADSIRLNFSQ--DHAAAVAAAERIAQLIERY 403 (405)
T ss_pred HhcCEEEeCchHhCCCCCCeEEEEecC--CHHHHHHHHHHHHHHHHHh
Confidence 6899864 2223 235899999985 5788888888887776554
No 283
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.63 E-value=2.4e-14 Score=166.48 Aligned_cols=281 Identities=17% Similarity=0.193 Sum_probs=184.2
Q ss_pred HHHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHH----HHhcCCEEEEEcC
Q 001586 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGT 709 (1049)
Q Consensus 634 i~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~----a~~~G~~Vv~V~~ 709 (1049)
..++++.+++++|.+.. +..++|..+..+++ . .. +++++||++...|+.+... +...|++++.++.
T Consensus 49 ~~~le~~la~l~g~~~~-l~~~sG~~al~~~l---~-ll-----~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~ 118 (378)
T TIGR01329 49 RTALESLLAKLDKADRA-FAFSSGMAALDVIT---R-LL-----NNGDEIIAGDDLYGGTDRLLTQVVPRSGVVVVHVDT 118 (378)
T ss_pred HHHHHHHHHHHhCCCcE-EEECCHHHHHHHHH---H-Hh-----CCCCEEEEcCCCchHHHHHHHHHHHHcCcEEEEeCC
Confidence 45889999999998654 45566765553222 2 11 2578899988777654432 4558999999987
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-ccccccccHHHHHHHHHHcCCEEEEeccccccccCcCCCCccCCcEEE
Q 001586 710 DAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1049)
Q Consensus 710 d~~g~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~Pg~~GaDi~~ 788 (1049)
.|+++++++++ ++|++|++++|+ .+|.+. |+++|+++||++|++++||+++... ....|.++|+|+++
T Consensus 119 -----~d~~~le~~i~---~~tklv~le~psnptg~v~-dl~~I~~la~~~g~~vivD~a~~~~--~~~~~l~~g~Di~v 187 (378)
T TIGR01329 119 -----TDLDKVKAALG---PKTKLVLLESPTNPLQKIV-DIRKISEMAHAQNALVVVDNTMMSP--LLCNPLELGADIVY 187 (378)
T ss_pred -----CCHHHHHHhcC---cCceEEEEECCCCCCCeee-cHHHHHHHHHHcCCEEEEECCCccc--ccCChhhcCCcEEE
Confidence 38999999997 789999999995 599887 8999999999999999999986422 23467778999999
Q ss_pred eCCCcccccCCCCCCCceeEEEEccc-ccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhh
Q 001586 789 LNLHKTFCIPHGGGGPGMGPIGVKKH-LAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (1049)
Q Consensus 789 ~s~hK~f~~P~g~GGPg~G~i~~~~~-l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eG 867 (1049)
+|+||+++-| ++...|+++++++ +.+.+.. . + ...+. +.++. -+++...+.+.
T Consensus 188 ~S~tK~l~G~---~~~~~G~v~~~~~~~~~~~~~--~----------~-~~~G~-~~~~~---------~a~l~~~~l~t 241 (378)
T TIGR01329 188 HSATKFLAGH---SDVMAGVLAVKGEEIAKKVYF--L----------Q-NSTGS-GLAPF---------DCWLLLRGIKT 241 (378)
T ss_pred EecceeccCC---ccceeEEEEeCcHHHHHHHHH--H----------H-HhcCC-cCCHH---------HHHHHHccCCC
Confidence 9999998511 1223788888653 3232210 0 0 00011 11111 12344556677
Q ss_pred HHHHHHHHHHHHHHHHHHHhcc---CCeeeccCCC------------ceeeEEEEeccCccccCCCC-HHHHHHHHHHCC
Q 001586 868 LTEASKIAILNANYMAKRLEKH---YPILFRGVNG------------TVAHEFIVDLRGLKNTAGIE-PEDVAKRLMDYG 931 (1049)
Q Consensus 868 l~~~~~~~~~~a~yL~~~L~~~---~~v~~~g~~g------------~~~~e~iv~~~~~~~~~g~~-~~~v~k~L~~~G 931 (1049)
+..+.++...++..+++.|+++ -.+.|++..+ .+...+.|++. +.+ +.++.+.|...+
T Consensus 242 l~~R~e~~~~na~~la~~L~~~~~v~~v~~p~l~~~p~~~l~~~~~~g~~~~~sf~~~------~~~~~~~~~~~L~~~~ 315 (378)
T TIGR01329 242 LAIRIEKQQENARAIAMFLSTHPRVKKVRYAGLPSHPGFHLHFSQAKGAGSVLSFETG------SVALSKRLVEATKLFS 315 (378)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCcceEEEEEEC------CHHHHHHHHHhCcCcc
Confidence 8888888889999999999875 2345544211 01123334432 233 568888886665
Q ss_pred cccC--C---C-CCC-----------------C-CCEEEEEccCCCCHHHHHHHHHHHHHHHHH
Q 001586 932 FHGP--T---M-SWP-----------------V-PGTLMIEPTESESKEELDRYCDALISIREE 971 (1049)
Q Consensus 932 i~~~--~---~-~~p-----------------~-~~~lri~~t~~~t~eeid~fv~aL~~i~~~ 971 (1049)
+.++ + + ..| + .+.+|+|+. .|++|.++++|.+.++.
T Consensus 316 i~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svG----lE~~~dl~~dl~~al~~ 375 (378)
T TIGR01329 316 ITVSFGSVNSLISMPCFMSHASIPAEVREERGLPEDLVRLSVG----IEDVDDLISDLDIAFVT 375 (378)
T ss_pred cccCCCCCCceeeCCCccccccCCHHHHHhcCCCCCeEEEEec----cCCHHHHHHHHHHHHHh
Confidence 5432 1 1 111 1 368999986 45677888888877654
No 284
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.63 E-value=4.6e-14 Score=166.13 Aligned_cols=291 Identities=19% Similarity=0.166 Sum_probs=179.0
Q ss_pred HHHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHH----HHHhcCCEEEEEcC
Q 001586 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA----TAAMCGMKIVSVGT 709 (1049)
Q Consensus 634 i~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa----~a~~~G~~Vv~V~~ 709 (1049)
..++++.++++.|.+. .+..+||+.+..++++++ . +++++||++...|+.+.. .+...|+++++++
T Consensus 71 ~~~le~~la~l~g~~~-~v~fsSG~~Ai~~al~~l---l-----~~Gd~VI~~~~~y~~t~~~~~~~l~~~Gi~v~~vd- 140 (437)
T PRK05613 71 VEALENRIASLEGGVH-AVAFASGQAAETAAILNL---A-----GAGDHIVTSPRLYGGTETLFLVTLNRLGIEVTFVE- 140 (437)
T ss_pred HHHHHHHHHHHhCCCe-EEEeCCHHHHHHHHHHHh---c-----CCCCEEEECCCccHHHHHHHHHHHHhcCeEEEEEC-
Confidence 5578999999999864 456677776664444332 1 257899998877776532 2456899999998
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CccccccccHHHHHHHHHHcCCEEEEeccccccccCcCCCCccCCcEEE
Q 001586 710 DAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1049)
Q Consensus 710 d~~g~iD~~~L~~~i~~~~~~taaV~it~P-n~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~Pg~~GaDi~~ 788 (1049)
+. .|+++++++++ ++|++|+++.| |.+|.+. ||++|+++||++|++++||++++ .+.+..|-++|+|+++
T Consensus 141 ~~---~d~e~l~~~l~---~~tk~V~~e~~~Np~~~v~-di~~I~~la~~~gi~livD~t~a--~g~~~~p~~~GaDivv 211 (437)
T PRK05613 141 NP---DDPESWQAAVQ---PNTKAFFGETFANPQADVL-DIPAVAEVAHRNQVPLIVDNTIA--TAALVRPLELGADVVV 211 (437)
T ss_pred CC---CCHHHHHHhCC---ccCeEEEEECCCCCCCccc-CHHHHHHHHHHcCCeEEEECCCc--cccccChHHhCCCEEE
Confidence 32 28999999997 78999988877 5678887 89999999999999999999864 3344577788999999
Q ss_pred eCCCcccccCCCCCCCc---eeEEEEccccccc--------CCCCccccCCCC-CC----CCC-----------CCCCCC
Q 001586 789 LNLHKTFCIPHGGGGPG---MGPIGVKKHLAPF--------LPSHPVVSTGGI-PA----PEK-----------SQPLGT 841 (1049)
Q Consensus 789 ~s~hK~f~~P~g~GGPg---~G~i~~~~~l~~~--------lpg~~vg~t~~~-~~----~~~-----------~~~t~~ 841 (1049)
+|+||+++ |+| .|+++.+..+... +|. .+...... .. .++ ...++.
T Consensus 212 ~S~~K~l~------G~gd~~gG~vv~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 284 (437)
T PRK05613 212 ASLTKFYT------GNGSGLGGVLIDGGKFDWTVERDGKPVFPY-FVTPDPAYHGLKYADLGAPAFGLKARAGLLRDTGA 284 (437)
T ss_pred eeccceec------CCCcceeEEEEecCcccccccccccccCCC-CCCCccccccccccccchHHHHHHHHHHHHHhcCC
Confidence 99999884 443 3555544332100 110 00000000 00 000 000111
Q ss_pred CCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhccC---CeeeccCCCceeeEEEEeccCccccCCC
Q 001586 842 IAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHY---PILFRGVNGTVAHEFIVDLRGLKNTAGI 918 (1049)
Q Consensus 842 i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~~---~v~~~g~~g~~~~e~iv~~~~~~~~~g~ 918 (1049)
.-+ | --+|+...|-+.|..+.++..++|..+++.|+++. .|.|+|.. ..
T Consensus 285 ~~~-p---------~~a~l~~rgl~TL~lR~~~~~~nA~~lA~~L~~hp~V~~V~yPgl~------------------~~ 336 (437)
T PRK05613 285 TLS-P---------FNAWVTAQGLDTLSLRLERHNENAIKVAEFLNNHEKVAKVNFAGLK------------------DS 336 (437)
T ss_pred CCC-H---------HHHHHHHcccCcHHHHHHHHHHHHHHHHHHHHcCCCcceEECCCCC------------------CC
Confidence 110 1 13456677778888888999999999999999873 33444310 11
Q ss_pred CHHHHHHHHHHCCcccCCCCCCCCCEEEEEccCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCcccccc
Q 001586 919 EPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKVTCLFLHH 996 (1049)
Q Consensus 919 ~~~~v~k~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~eeid~fv~aL~~i~~~i~~i~~g~~~~~~~~l~~~ph~~~~ 996 (1049)
+..+++++....|+ ++-+-|.+ ..+.++..+|++.|+-+ ....++ | +...|...|.++.+
T Consensus 337 p~~~~~~~~~~~g~---------gg~~sf~l--~~~~~~~~~f~~~l~l~-~~~~sl--G----~~~sLv~~p~~~~h 396 (437)
T PRK05613 337 PWYATKEKLGLKYT---------GSVLSFDI--KGGKDEAWAFIDALKLH-SNLANI--G----DVRSLVVHPATTTH 396 (437)
T ss_pred ccHHHHHHhcCCCC---------ceEEEEEe--cCCHHHHHHHHHhCCcc-eEccCC--C----CCchhhcCCCccCC
Confidence 23455554321221 23333333 33567788888888633 121222 2 45555555555554
No 285
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=99.62 E-value=2.5e-13 Score=161.26 Aligned_cols=297 Identities=15% Similarity=0.180 Sum_probs=190.3
Q ss_pred HHHHHHHHHHhhCCC-ccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEE-EcCCCCCccHHHHHhcC--------C-
Q 001586 634 FNNLGEWLCTITGFD-SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCG--------M- 702 (1049)
Q Consensus 634 i~el~~~la~l~G~~-~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VL-ip~saHg~~pa~a~~~G--------~- 702 (1049)
..++.+.|+++++.+ ...++.+||+++++++++.+|.| ++|.+|| ...+.||....+....| +
T Consensus 98 ~~~lae~L~~~~p~~~~~v~f~~SGsEA~e~AlklAr~~------tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~ 171 (457)
T PRK05639 98 AIRVAEKLAEISPIENPKVLFGLSGSDAVDMAIKVSKFS------TRRPWILAFIGAYHGQTLGATSVAAFQSSQKRGFS 171 (457)
T ss_pred HHHHHHHHHhhCCCCcCEEEEeCchHHHHHHHHHHHHHh------cCCCeEEEECCCcCCccHHHHHHcCCCcccccCCC
Confidence 347888899988643 23477899999999999998876 2355666 57889998765543322 1
Q ss_pred ----EEEEEcCCCCCC--------CCH--------HHHHHHHHh---cCCCeEEEEEEcC-Cccccccc---cHHHHHHH
Q 001586 703 ----KIVSVGTDAKGN--------INI--------EELRKAAEA---NRDNLSTLMVTYP-STHGVYEE---GIDEICKI 755 (1049)
Q Consensus 703 ----~Vv~V~~d~~g~--------iD~--------~~L~~~i~~---~~~~taaV~it~P-n~~G~i~~---di~eI~~l 755 (1049)
.++.+|.....+ -|. +.|++.+.. ..+++++|+++.. ...|++.+ .+++|.++
T Consensus 172 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~l 251 (457)
T PRK05639 172 PLMPNVVWIPYPNPYRNPWGINGYEEPDELINRFLDYLENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKL 251 (457)
T ss_pred CCCCCceEeCCCccccccccccccCCHHHHHHHHHHHHHHHHHHhhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHH
Confidence 245566532111 122 345555422 2478999988754 34566643 48999999
Q ss_pred HHHcCCEEEEeccccccccCcCCCCcc--------CCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccC
Q 001586 756 IHDNGGQVYMDGANMNAQVGLTSPGYI--------GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVST 827 (1049)
Q Consensus 756 ah~~G~ll~vD~A~~~a~~gl~~Pg~~--------GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t 827 (1049)
|++||+++++|+++ .|+.+.|.+ -+|++++ .|.++ +| -.+|.+++++++.....+..
T Consensus 252 c~~~g~llI~DEv~----tG~GrtG~~~a~~~~gv~PDiv~~--gK~l~----gG-~pi~av~~~~~i~~~~~~~~---- 316 (457)
T PRK05639 252 LDEHGILLVMDEVQ----TGIGRTGKWFASEWFEVKPDLIIF--GKGVA----SG-MGLSGVIGRKELMDLTSGSA---- 316 (457)
T ss_pred HHHcCCEEEEechh----hccCcCchHHHHHhcCCCCCEEEe--chhhc----CC-CcceeEEehHHHHhhcCCCc----
Confidence 99999999999974 456566542 4699886 57763 44 34677888888776322110
Q ss_pred CCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc---CCee--eccCCCcee
Q 001586 828 GGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVA 902 (1049)
Q Consensus 828 ~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~---~~v~--~~g~~g~~~ 902 (1049)
. . ++.|+++.++++.+.|..+..+++. ++...+.++|.++|+++ +.++ ..|. | .+
T Consensus 317 ------------~--~-T~~g~p~~~aaa~a~l~~l~~~~l~---~~~~~~g~~l~~~L~~l~~~~~~~~~VrG~-G-l~ 376 (457)
T PRK05639 317 ------------L--L-TPAANPVISAAAEATLEIIEEENLL---KNALKVGEFIKKRLLEMKESFEVIGDVRGK-G-LM 376 (457)
T ss_pred ------------c--c-CCCcCHHHHHHHHHHHHHHHHccHH---HHHHHHHHHHHHHHHHHHHhCCCEEeeccc-e-eE
Confidence 0 1 1234666677788888888776654 34445788999999874 4432 1221 2 22
Q ss_pred eEEEEeccCccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEccCCCCHHHHHHHHHHHHHHHHHHH
Q 001586 903 HEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIA 973 (1049)
Q Consensus 903 ~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~eeid~fv~aL~~i~~~i~ 973 (1049)
..+-+..+.. .........+.+.|.++|+.+..... ..+.+|+.|....|++|+|.++++|.++++++.
T Consensus 377 ~gve~~~~~~-~~~~~~~~~~~~~~~~~Gv~~~~~g~-~~~~lr~~Ppl~it~~~id~~~~~l~~~l~~~~ 445 (457)
T PRK05639 377 IGVEIVKENG-KPDPELTGKICWRAFELGLILPSYGM-FGNVIRITPPLVITKEIAEKGLEIMERAIKDAL 445 (457)
T ss_pred EEEEEecCCC-CCCHHHHHHHHHHHHhCCeEEeecCC-CCCEEEEeCCCccCHHHHHHHHHHHHHHHHHHH
Confidence 2221211100 00001135678888999999754321 147999999999999999999999999988764
No 286
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.62 E-value=3.5e-14 Score=165.80 Aligned_cols=272 Identities=18% Similarity=0.084 Sum_probs=183.2
Q ss_pred HHHHHHHHHHhCCCCcceEeccchHHHHHHHHHHhhhccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc---ch
Q 001586 214 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---KD 290 (1049)
Q Consensus 214 ~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a~~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~~---~~ 290 (1049)
.++++.++++.|.+ ++.++++||+++.++++++ .. +||+||+++..|+.+...+...++..|+++++++. ++
T Consensus 68 ~~Le~~lA~l~g~~--~~l~~~sgt~Ai~~~l~al-~~--~GD~Vl~~~~~y~~~~~~~~~~~~~~Gi~v~~vd~~~~~~ 142 (394)
T PRK07050 68 LALAQRLAEIEGGR--HALLQPSGLAAISLVYFGL-VK--AGDDVLIPDNAYGPNRDHGEWLARDFGITVRFYDPLIGAG 142 (394)
T ss_pred HHHHHHHHHHhCCC--eEEEeccHHHHHHHHHHHH-hC--CCCEEEEecCCcccHHHHHHHHHHhcCeEEEEECCCCHHH
Confidence 45678999999975 5888899999888877765 33 89999999999999888776667778999999976 45
Q ss_pred hhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCCCC
Q 001586 291 IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGG 367 (1049)
Q Consensus 291 l~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~p~~~GaDivvgs~-k~lg~P~~~GG 367 (1049)
+++ +.++|++|++++| |++|.+.|+++|+++||++|++++++ +.++.+....|.++|+||++.|. |.+++. |+
T Consensus 143 l~~~i~~~tklV~le~p~Np~~~~~di~~I~~ia~~~gi~livD-~a~a~~~~~~~l~~GaDi~v~S~tK~~~g~---~~ 218 (394)
T PRK07050 143 IADLIQPNTRLIWLEAPGSVTMEVPDVPAITAAARARGVVTAID-NTYSAGLAFKPFEHGVDISVQALTKYQSGG---SD 218 (394)
T ss_pred HHHhcCCCCeEEEEECCCCCCccHhhHHHHHHHHHHcCCEEEEE-CCcccccccCHHHcCCeEEEEECCceecCC---CC
Confidence 666 7889999999998 78999999999999999999999994 45666767778889999999998 777531 22
Q ss_pred CceEEEEE-chhHHhcCCCceeeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcchHHHH
Q 001586 368 PHAAFLAT-SQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTI 446 (1049)
Q Consensus 368 P~~G~l~~-~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irrekaTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i 446 (1049)
.-+|.+.+ ++++.+++- ..|..-|. | ..+. ..|+...|.+.+...
T Consensus 219 ~~gG~v~~~~~~~~~~~~-------------------------~~~~~~G~---~-~~~~-----~a~l~lr~l~tl~~R 264 (394)
T PRK07050 219 VLMGATITADAELHAKLK-------------------------LARMRLGI---G-VSAD-----DCSLVLRGLPSLQVR 264 (394)
T ss_pred eeEEEEEECCHHHHHHHH-------------------------HHHHhcCC---C-CCHH-----HHHHHHcCCCcHHHH
Confidence 22344444 455544330 01111110 1 0121 113455556666666
Q ss_pred HHHHHHHHHHHHHHhhcCCCeE-EcCC-----C-----------CcceEEEecCC------HHHHHHHHHHcCCe--ee-
Q 001586 447 AQRVHGLAGTFALGLKKLGTVE-VQGL-----P-----------FFDTVKVKCAD------AHAIASAAYKIEMN--LR- 500 (1049)
Q Consensus 447 a~~~~~~a~~l~~~L~~~g~~~-v~~~-----~-----------~~~~v~i~~~~------~~~v~~~L~~~gI~--~~- 500 (1049)
.++..++|..+++.|++...+. ++.+ + ....|+|.+.+ ..++.+.|...++- ++
T Consensus 265 l~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~~~~~~~~~~~~l~~~~~~~s~G~ 344 (394)
T PRK07050 265 LAAHDRSALEVAEWLKARPEIATVLHPALPDCPGHAFWMRDFTGAGGLFSVVFDERYSPAQVDAFVEALELFAIGWSWGG 344 (394)
T ss_pred HHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECCCCCHHHHHHHHHcCCCCeeccccCC
Confidence 7777888999999998874343 3211 1 11235565532 34566666554442 11
Q ss_pred ------e------------ecCCeEEEEeccCCCHHHHHHHHHHHh
Q 001586 501 ------V------------VDSNTVTASFDETTTLEDVDKLFIVFA 528 (1049)
Q Consensus 501 ------~------------~~~~~vris~~~~~t~edid~lv~aL~ 528 (1049)
+ ..++.||+|++.-+.++=|+.|.++|.
T Consensus 345 ~~sl~~~~~~~~~~~~~~~~~~~~iR~svGlE~~~dl~~dl~~al~ 390 (394)
T PRK07050 345 ACSLAMPYDVASMRTAKWPHRGTLVRLYIGLEDEADLIADLEQALE 390 (394)
T ss_pred ccceEeeCcccccchhhcCCCCCEEEEEeCcCCHHHHHHHHHHHHH
Confidence 0 012568999887655544566666654
No 287
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=99.62 E-value=6.9e-14 Score=161.14 Aligned_cols=297 Identities=17% Similarity=0.208 Sum_probs=181.4
Q ss_pred hcHHHHHHHHHHHHHHhhCCC--cc-ccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCEE
Q 001586 628 QGYQEMFNNLGEWLCTITGFD--SF-SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKI 704 (1049)
Q Consensus 628 ~G~~~~i~el~~~la~l~G~~--~~-~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~V 704 (1049)
+|..++...+.+++....|.+ .. .+..++|++. +..++++.+. ..|+ ++++|+++...+..+...+...|+++
T Consensus 36 ~G~~~lr~aia~~~~~~~g~~~~~~~~Iiit~Gs~~--ai~~~~~~~~-~~g~-~~d~Vl~~~p~y~~~~~~~~~~g~~~ 111 (350)
T TIGR03537 36 LGTKALREAISGWFERRFGVKLDPDAQVLPSAGSKE--AIFHFPLVFI-DPEE-DRRRVIFGTPGYPVYERGALFAGGEP 111 (350)
T ss_pred CCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHH--HHHHHHHHHc-CCCC-CCceEEEcCCCCcchHHHHHhcCCEE
Confidence 465566666777776666753 33 4556666542 2333333321 1221 24689999887777777788999999
Q ss_pred EEEcCCC-CC-CCCHHHHHHHHHhcCCCeEEEEEEcCC-ccccccc--cHHHHHHHHHHcCCEEEEeccccccccCcCCC
Q 001586 705 VSVGTDA-KG-NINIEELRKAAEANRDNLSTLMVTYPS-THGVYEE--GIDEICKIIHDNGGQVYMDGANMNAQVGLTSP 779 (1049)
Q Consensus 705 v~V~~d~-~g-~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~~--di~eI~~lah~~G~ll~vD~A~~~a~~gl~~P 779 (1049)
+.++.+. +| .+|+++++++++ +++++|++++|+ .+|.+.+ .+++|+++|+++|+++++|+++..-..+ ..+
T Consensus 112 ~~v~~~~~~~~~~d~~~l~~~~~---~~~~~i~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~-~~~ 187 (350)
T TIGR03537 112 TAVKLKKEDGFLLRLEKVEKSIL---EETKIVWINYPHNPTGATAPRSYLKETIAMCREHGIILCSDECYTEIYFG-EPP 187 (350)
T ss_pred EEcccCcccCCccCHHHHHHhhh---hccEEEEEeCCCCCcCcccCHHHHHHHHHHHHHcCcEEEEeccccccccC-CCC
Confidence 9999963 33 589999999987 688999999994 6997751 3999999999999999999986421111 111
Q ss_pred ---CccCCc--EEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHH
Q 001586 780 ---GYIGAD--VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILP 854 (1049)
Q Consensus 780 ---g~~GaD--i~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~ 854 (1049)
..++.| +++.+++|+|+.| |-++|+++.++++...+... + ...+++++...+..
T Consensus 188 ~~~~~~~~~~~i~~~s~SK~~g~~----GlRiG~~~~~~~~~~~~~~~------------~--~~~~~~~~~~~q~~--- 246 (350)
T TIGR03537 188 HSALEVGIENVLAFHSLSKRSGMT----GYRSGFVAGDEKLISFLRKL------------R--ANFGVASPDFVQAA--- 246 (350)
T ss_pred CchhhcCcCCEEEEeecccccCCc----cccceeeecCHHHHHHHHHH------------H--HhhccCCCHHHHHH---
Confidence 112233 6666888987543 56789998876655443210 0 00112221111111
Q ss_pred HHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHHHCCcc
Q 001586 855 ISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFH 933 (1049)
Q Consensus 855 ~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~-~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~ 933 (1049)
+.+.+ ...+.+++..++...+.+.+.+.|++. +++. .+.+.++ +.++++. +.+..++++.|.++|+.
T Consensus 247 -~~~~l--~~~~~~~~~r~~l~~~~~~~~~~l~~~g~~~~--~~~g~~~--~~~~~~~-----~~~~~~l~~~L~~~gv~ 314 (350)
T TIGR03537 247 -AKAAW--SDDNHVLERRKIFKRKRDLFIEFFNKVGLEYL--YPDATFY--LWVKVPS-----GIDAKDYALRLLENGIV 314 (350)
T ss_pred -HHHHh--CCcHHHHHHHHHHHHHHHHHHHHHHHCCCccc--CCCeEEE--EEEECCC-----CCCHHHHHHHHHHCCEE
Confidence 11111 122334444555556677788888764 3322 1222221 2356542 34678999999999998
Q ss_pred cCC-CCCC--CCCEEEEEccCCCCHHHHHHHHHHHHH
Q 001586 934 GPT-MSWP--VPGTLMIEPTESESKEELDRYCDALIS 967 (1049)
Q Consensus 934 ~~~-~~~p--~~~~lri~~t~~~t~eeid~fv~aL~~ 967 (1049)
+.. ..|. ..+++|+++. .+.+++++.++.|++
T Consensus 315 v~~g~~f~~~~~~~~Ri~~~--~~~~~~~~~l~~~~~ 349 (350)
T TIGR03537 315 VAPGENFGSGEEGYVRVALV--PTLEECEEALRLWER 349 (350)
T ss_pred EcCchhhCCCCCCEEEEEec--CCHHHHHHHHHHHhc
Confidence 743 2343 2578999975 467778777776653
No 288
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.62 E-value=1.9e-13 Score=159.03 Aligned_cols=277 Identities=17% Similarity=0.193 Sum_probs=177.6
Q ss_pred HhhhHHHHHHHHHHHHHHHhCCCCcceEeccchHHHHHHHHHHhhhccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEE
Q 001586 205 IAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVV 284 (1049)
Q Consensus 205 ~sqg~le~l~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a~~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~ 284 (1049)
..+|......++++.+++++|.+ ...++.+|+.+..+++.++ .++||+|++++..|+++...++. .|.+++
T Consensus 78 ~~~g~~~~~~~l~~~la~~~~~~--~~i~~~~g~~~~~~~l~~~---~~~gd~V~~~~~~~~~~~~~~~~----~g~~~~ 148 (385)
T PRK05958 78 LVTGNSPAHEALEEELAEWFGAE--RALLFSSGYAANLAVLTAL---AGKGDLIVSDKLNHASLIDGARL----SRARVR 148 (385)
T ss_pred cccCCcHHHHHHHHHHHHHhCCC--cEEEECcHHHHHHHHHHHh---CCCCCEEEEeCccCHHHHHHHHh----cCCceE
Confidence 34455556778889999999954 3456666765555433332 23889999999999999887643 467777
Q ss_pred EeCc---chhhc-cCC---CEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCC----------CCc
Q 001586 285 VSDL---KDIDY-KSG---DVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKP----------PGE 346 (1049)
Q Consensus 285 ~v~~---~~l~~-l~~---~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~----------p~~ 346 (1049)
.++. +++++ +.+ +++++++..+ |.+|.+.++++|+++||++|++++++ +..+.+.+.. ...
T Consensus 149 ~~~~~d~~~l~~~i~~~~~~~~lvi~~~~~~~~G~~~~l~~i~~ia~~~~~~li~D-e~~~~g~~~~~g~~~~~~~~~~~ 227 (385)
T PRK05958 149 RYPHNDVDALEALLAKWRAGRALIVTESVFSMDGDLAPLAELVALARRHGAWLLVD-EAHGTGVLGPQGRGLAAEAGLAG 227 (385)
T ss_pred EeCCCCHHHHHHHHHhccCCCeEEEEEecccCCCCcCCHHHHHHHHHHhCCEEEEE-CcccccccCCCCCchHHhhCCCC
Confidence 6654 45555 433 3566666555 67899999999999999999999994 3334332211 111
Q ss_pred ccceEEEecC-ccccccCCCCCCceEEEEEchhHHhcCCCceeeeeecCCCCcceeeecccccccccccccCCCccchhH
Q 001586 347 LGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQA 425 (1049)
Q Consensus 347 ~GaDivvgs~-k~lg~P~~~GGP~~G~l~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irrekaTsni~t~~~ 425 (1049)
..-+|+++|. |.|+. ++ |++..++++.+.+-. ...+ +.. . + -+++..
T Consensus 228 ~~~~i~~~s~sK~~~~------~G-g~~~~~~~~~~~~~~---------~~~~-~~~-----------~-~---~~~~~~ 275 (385)
T PRK05958 228 EPDVILVGTLGKALGS------SG-AAVLGSETLIDYLIN---------RARP-FIF-----------T-T---ALPPAQ 275 (385)
T ss_pred CCceEEEEechhhccc------CC-cEEEcCHHHHHHHHH---------hCcc-cee-----------c-C---CCCHHH
Confidence 2334777776 87753 22 577777766554310 0000 100 0 0 011122
Q ss_pred HHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEcCCCCcceEEEecCC---HHHHHHHHHHcCCeeeee
Q 001586 426 LLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD---AHAIASAAYKIEMNLRVV 502 (1049)
Q Consensus 426 l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~g~~~v~~~~~~~~v~i~~~~---~~~v~~~L~~~gI~~~~~ 502 (1049)
..+..+++ .++.. . +++.+++.++.+++.+.|+++| +++..+ ...-+.+.+++ +.++.++|.++||.+...
T Consensus 276 ~aa~~aal--~~~~~-~-~~~~~~~~~~~~~l~~~L~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~gI~v~~~ 349 (385)
T PRK05958 276 AAAARAAL--RILRR-E-PERRERLAALIARLRAGLRALG-FQLMDS-QSAIQPLIVGDNERALALAAALQEQGFWVGAI 349 (385)
T ss_pred HHHHHHHH--HHHhc-C-HHHHHHHHHHHHHHHHHHHHcC-CCcCCC-CCCEEEEEeCCHHHHHHHHHHHHHCCceEecc
Confidence 22333333 33322 2 5678888999999999999887 776532 12224455543 568999999999988542
Q ss_pred -----c--CCeEEEEeccCCCHHHHHHHHHHHhC
Q 001586 503 -----D--SNTVTASFDETTTLEDVDKLFIVFAG 529 (1049)
Q Consensus 503 -----~--~~~vris~~~~~t~edid~lv~aL~~ 529 (1049)
. .+.+|+|++.++|++|+|++++.|..
T Consensus 350 ~~~~~~~~~~~lRis~~~~~~~~~i~~~l~~l~~ 383 (385)
T PRK05958 350 RPPTVPAGTSRLRITLTAAHTEADIDRLLEALAE 383 (385)
T ss_pred cCCCCCCCCceEEEEecCCCCHHHHHHHHHHHHh
Confidence 1 25799999999999999999999863
No 289
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=99.62 E-value=1.1e-13 Score=161.98 Aligned_cols=305 Identities=16% Similarity=0.159 Sum_probs=182.8
Q ss_pred hcHHHHHHHHHHHHHHhhCCC---cccc-ccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCE
Q 001586 628 QGYQEMFNNLGEWLCTITGFD---SFSL-QPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMK 703 (1049)
Q Consensus 628 ~G~~~~i~el~~~la~l~G~~---~~~l-~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~ 703 (1049)
+|..++.+.+.+.+....|.. ...+ ..+++++|...++ +... .++++|+++...++.+...++..|++
T Consensus 67 ~g~~~lr~~ia~~~~~~~~~~~~~~~~i~it~G~~~al~~~~---~~~~-----~~gd~vl~~~p~y~~~~~~~~~~g~~ 138 (391)
T PRK07309 67 AGLLELRQAAADFVKEKYNLDYAPENEILVTIGATEALSASL---TAIL-----EPGDKVLLPAPAYPGYEPIVNLVGAE 138 (391)
T ss_pred CCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHH---HHhc-----CCCCEEEEeCCCCcchHHHHHHcCCE
Confidence 455555555666666555652 1233 3444455553333 3221 25688999888777776678889999
Q ss_pred EEEEcCCCC-CCCCHHHHHHHHHhcCCCeEEEEEEcCC-cccccc--ccHHHHHHHHHHcCCEEEEecccccccc-CcC-
Q 001586 704 IVSVGTDAK-GNINIEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQV-GLT- 777 (1049)
Q Consensus 704 Vv~V~~d~~-g~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~--~di~eI~~lah~~G~ll~vD~A~~~a~~-gl~- 777 (1049)
++.++.+++ ..+|+++|+++++++.+++++|++++|+ .+|..- .++++|+++|+++|+++++|+++..-.. +-.
T Consensus 139 ~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~i~l~~P~NPtG~~~s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~~~ 218 (391)
T PRK07309 139 IVEIDTTENDFVLTPEMLEKAILEQGDKLKAVILNYPANPTGVTYSREQIKALADVLKKYDIFVISDEVYSELTYTGEPH 218 (391)
T ss_pred EEEEecCCcCCcCCHHHHHHHhhccCCCeEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEccccceeeCCCCC
Confidence 999998664 4799999999997554579999999995 689763 2599999999999999999998642110 100
Q ss_pred CC-CccCCc--EEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHH
Q 001586 778 SP-GYIGAD--VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILP 854 (1049)
Q Consensus 778 ~P-g~~GaD--i~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~ 854 (1049)
.+ ..+..| +++.|++|.|++| |-++|++++++++...+-.. ... ...+++...+ .
T Consensus 219 ~~~~~~~~~~~i~~~S~SK~~g~~----GlRvG~~v~~~~~~~~~~~~------------~~~--~~~~~~~~~q----~ 276 (391)
T PRK07309 219 VSIAEYLPDQTILINGLSKSHAMT----GWRIGLIFAPAEFTAQLIKS------------HQY--LVTAATTMAQ----F 276 (391)
T ss_pred CCHHHhccCCEEEEecChhhccCc----cceeEEEEeCHHHHHHHHHH------------Hhh--cccCCChHHH----H
Confidence 01 111223 7778899988654 67799999987765543200 000 1111111111 1
Q ss_pred HHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHH-HHCCcc
Q 001586 855 ISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRL-MDYGFH 933 (1049)
Q Consensus 855 ~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L-~~~Gi~ 933 (1049)
++..++.. +..-.....+...++.+++.+.|++. .+.+..+.+.++ +.++++. ..+.+..+++++| .++||.
T Consensus 277 ~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~p~gg~~--~~~~l~~---~~~~~~~~~~~~l~~~~gv~ 349 (391)
T PRK07309 277 AAVEALTN-GKDDALPMKKEYIKRRDYIIEKMTDL-GFKIIKPDGAFY--IFAKIPA---GYNQDSFKFLQDFARKKAVA 349 (391)
T ss_pred HHHHHHhC-ChhHHHHHHHHHHHHHHHHHHHHHHC-CCeecCCCeeEE--EEEECCC---CCCCCHHHHHHHHHHhCCEE
Confidence 12222221 21112223344556778888888775 222212222221 2345442 0112466788775 468998
Q ss_pred cCC-CCC-C-CCCEEEEEccCCCCHHHHHHHHHHHHHHHHH
Q 001586 934 GPT-MSW-P-VPGTLMIEPTESESKEELDRYCDALISIREE 971 (1049)
Q Consensus 934 ~~~-~~~-p-~~~~lri~~t~~~t~eeid~fv~aL~~i~~~ 971 (1049)
+.. ..| + ..+++|+++.. +.++++..++.|++++++
T Consensus 350 v~pg~~f~~~~~~~iRi~~~~--~~~~l~~~i~~l~~~~~~ 388 (391)
T PRK07309 350 FIPGAAFGPYGEGYVRLSYAA--SMETIKEAMKRLKEYMEE 388 (391)
T ss_pred EeCchhhCCCCCCEEEEEecC--CHHHHHHHHHHHHHHHHh
Confidence 642 223 2 25799999874 578899999999887755
No 290
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.62 E-value=5.1e-14 Score=163.37 Aligned_cols=210 Identities=21% Similarity=0.186 Sum_probs=148.4
Q ss_pred HHHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHH----HHHhcCCEEEEEcC
Q 001586 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA----TAAMCGMKIVSVGT 709 (1049)
Q Consensus 634 i~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa----~a~~~G~~Vv~V~~ 709 (1049)
..++++.+++++|.+.+ +..++|.+|...+++++. +++++||++...|+.... .+...|++++.++.
T Consensus 42 ~~~le~~la~l~g~~~a-~~~~sG~~Ai~~~l~~l~--------~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~ 112 (369)
T cd00614 42 VDALEKKLAALEGGEAA-LAFSSGMAAISTVLLALL--------KAGDHVVASDDLYGGTYRLFERLLPKLGIEVTFVDP 112 (369)
T ss_pred HHHHHHHHHHHHCCCCE-EEEcCHHHHHHHHHHHHc--------CCCCEEEECCCCcchHHHHHHHHHhhcCeEEEEeCC
Confidence 45788999999998764 555777776655554432 256889998877765443 24568999999987
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CccccccccHHHHHHHHHHcCCEEEEeccccccccCcCCCCccCCcEEE
Q 001586 710 DAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1049)
Q Consensus 710 d~~g~iD~~~L~~~i~~~~~~taaV~it~P-n~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~Pg~~GaDi~~ 788 (1049)
+ |+++++++++ +++++|++++| |.+|.+. |+++|+++||++|++++||+++.. +.+..|-++|+|+++
T Consensus 113 ~-----d~~~l~~~i~---~~~~~v~~e~~~np~g~~~-dl~~i~~la~~~g~~livD~t~~~--~~~~~~~~~g~Divv 181 (369)
T cd00614 113 D-----DPEALEAAIK---PETKLVYVESPTNPTLKVV-DIEAIAELAHEHGALLVVDNTFAT--PYLQRPLELGADIVV 181 (369)
T ss_pred C-----CHHHHHHhcC---CCCeEEEEECCCCCCCeec-CHHHHHHHHHHcCCEEEEECCCcc--hhcCChhhhCCcEEE
Confidence 4 6999999996 68999999999 4689887 899999999999999999998542 333567778999999
Q ss_pred eCCCcccccCCCCCCCceeEEEEcc-cccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhh
Q 001586 789 LNLHKTFCIPHGGGGPGMGPIGVKK-HLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (1049)
Q Consensus 789 ~s~hK~f~~P~g~GGPg~G~i~~~~-~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eG 867 (1049)
.|++|+++.+ |...+|++++++ ++...+... + ...+...+ + ..+|+. ..+-+.
T Consensus 182 ~S~tK~l~g~---~~~~gG~v~~~~~~l~~~l~~~------------~-~~~g~~~~-----p---~~a~~~--l~~l~t 235 (369)
T cd00614 182 HSATKYIGGH---SDVIAGVVVGSGEALIQRLRFL------------R-LALGTILS-----P---FDAWLL--LRGLKT 235 (369)
T ss_pred eccceeccCC---CCceEEEEEeCcHHHHHHHHHH------------H-HhhCCCCC-----H---HHHHHH--HcCCCC
Confidence 9999998411 223478999876 555443210 0 00111111 1 123333 334456
Q ss_pred HHHHHHHHHHHHHHHHHHHhcc
Q 001586 868 LTEASKIAILNANYMAKRLEKH 889 (1049)
Q Consensus 868 l~~~~~~~~~~a~yL~~~L~~~ 889 (1049)
+..+.++..+++.++++.|+++
T Consensus 236 l~~r~~~~~~na~~la~~L~~~ 257 (369)
T cd00614 236 LPLRMERHSENALKVAEFLEKH 257 (369)
T ss_pred HHHHHHHHHHHHHHHHHHHHcC
Confidence 6777788889999999999875
No 291
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.62 E-value=1.4e-13 Score=163.26 Aligned_cols=296 Identities=17% Similarity=0.153 Sum_probs=183.2
Q ss_pred HHHHHHHHHHHhhCCC--ccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEE-EcCCCCCccHHHHHhcCC-------
Q 001586 633 MFNNLGEWLCTITGFD--SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGM------- 702 (1049)
Q Consensus 633 ~i~el~~~la~l~G~~--~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VL-ip~saHg~~pa~a~~~G~------- 702 (1049)
...++.+.|+++++.. ...++.+||+++++++++.+|.|. +|++|| ...+.||....+....+.
T Consensus 100 ~~~~la~~l~~~~p~~~~~~v~f~~sGseA~e~AlklAr~~t------gr~~ii~~~~~yHG~t~~al~~~~~~~~~~~~ 173 (443)
T PRK06058 100 GYVAVAEQLNRLTPGDHEKRSALFNSGAEAVENAVKIARSYT------GRQAVVVFDHAYHGRTNLTMALTAKSMPYKSG 173 (443)
T ss_pred HHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHHHHHHHHHHhh------CCCeEEEECCCcCcChHHHHhhcCCCcccccc
Confidence 3457888899988533 234778999999999999888872 345666 567899987665433221
Q ss_pred ------EEEEEcCCCCCC------C--------CHHHHHHHHHhcCCCeEEEEEEcCC-ccccccc---cHHHHHHHHHH
Q 001586 703 ------KIVSVGTDAKGN------I--------NIEELRKAAEANRDNLSTLMVTYPS-THGVYEE---GIDEICKIIHD 758 (1049)
Q Consensus 703 ------~Vv~V~~d~~g~------i--------D~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~~---di~eI~~lah~ 758 (1049)
.+..+|.....+ . .++.+++.+. .+++++|+++... ..|++.+ .+++|.++|++
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~iAavi~EPi~g~gG~~~p~~~yl~~lr~lc~~ 251 (443)
T PRK06058 174 FGPFAPEVYRAPMSYPYRDPKGLATDGEEAAARAITVIEKQVG--ADNLAAVIIEPIQGEGGFIVPAEGFLPALLEWCRE 251 (443)
T ss_pred cCCCCCCceEcCCCcccccccccccchHHHHHHHHHHHHHhhC--CCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHH
Confidence 233333211110 1 1222333332 3678888876443 3566642 49999999999
Q ss_pred cCCEEEEeccccccccCcCCCCcc--------CCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCC
Q 001586 759 NGGQVYMDGANMNAQVGLTSPGYI--------GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGI 830 (1049)
Q Consensus 759 ~G~ll~vD~A~~~a~~gl~~Pg~~--------GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~ 830 (1049)
||+++++|++ +.|+.+.|.+ -+|++++ .|.++ ||-.+|.+++++++++.+....
T Consensus 252 ~gillI~DEV----~tGfgRtG~~fa~~~~gv~PDiv~~--gK~l~-----~G~Pi~av~~~~~i~~~~~~~~------- 313 (443)
T PRK06058 252 NGVVFIADEV----QTGFARTGAWFACEHEGIVPDLITT--AKGIA-----GGLPLSAVTGRAEIMDAPHPGG------- 313 (443)
T ss_pred cCCEEEEecc----ccCCCcChhhhHHHhcCCCCCEEEE--ccccc-----CCCccEEEEEcHHHHhhccCCC-------
Confidence 9999999987 4556555532 3689887 48763 3444777778877765542110
Q ss_pred CCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc---CCee--eccCCCceeeEE
Q 001586 831 PAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEF 905 (1049)
Q Consensus 831 ~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~---~~v~--~~g~~g~~~~e~ 905 (1049)
+ + +++.|+++.++++.+.|..+.++++. ++..++.++|.++|+++ +.++ ..|. |.. ..+
T Consensus 314 --~------~---~T~~gnpl~~aaa~a~L~~~~~~~l~---~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~-G~~-~~i 377 (443)
T PRK06058 314 --L------G---GTYGGNPVACAAALAAIETIEEDDLV---ARARQIEALMTDRLRALAAEDDRIGDVRGR-GAM-IAI 377 (443)
T ss_pred --C------C---CCCCCCHHHHHHHHHHHHHHHHcCHH---HHHHHHHHHHHHHHHHHHhhCCcEEeeecc-ceE-EEE
Confidence 0 1 12335667777888888887666554 44446678999999874 3432 2232 322 122
Q ss_pred EEeccCccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEccCCCCHHHHHHHHHHHHHHHHH
Q 001586 906 IVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREE 971 (1049)
Q Consensus 906 iv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~eeid~fv~aL~~i~~~ 971 (1049)
.+.-+.-+.........+.+++.++|+.+.... +.++++|+.|....|++|||+++++|.+++++
T Consensus 378 ~~~~~~~~~~~~~~~~~l~~~~~~~Gv~~~~~~-~~~~~lr~~Ppl~~t~~~i~~~~~~l~~~l~~ 442 (443)
T PRK06058 378 ELVKPGTTEPDAELTKALAAAAHAAGVIVLTCG-TYGNVIRLLPPLVIGDELLREGLDVLEAALAD 442 (443)
T ss_pred EEecCCCCCCcHHHHHHHHHHHHHCCeEEeccC-CCCCEEEEECCCccCHHHHHHHHHHHHHHHHh
Confidence 221110000000013457777889999874322 12479999999999999999999999988754
No 292
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.62 E-value=5.4e-14 Score=164.14 Aligned_cols=219 Identities=21% Similarity=0.235 Sum_probs=151.2
Q ss_pred HHHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHH----HHHhcCCEEEEEcC
Q 001586 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA----TAAMCGMKIVSVGT 709 (1049)
Q Consensus 634 i~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa----~a~~~G~~Vv~V~~ 709 (1049)
..++++.+++++|.+.+ +..++|..+...++.++. +++++||++...|+.... .+...|++++.++.
T Consensus 61 ~~~le~~lA~l~g~~~a-v~~~sG~~Ai~~~l~al~--------~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~~~~vd~ 131 (391)
T TIGR01328 61 VSNLEGRIAFLEGTEAA-VATSSGMGAIAATLLTIL--------KAGDHLISDECLYGCTFALLEHALTKFGIQVDFINM 131 (391)
T ss_pred HHHHHHHHHHHhCCCcE-EEECCHHHHHHHHHHHHh--------CCCCEEEEecCcchHHHHHHHHHHhcCCeEEEEECC
Confidence 34788999999998874 667777766644443331 256889998877764332 24568999999987
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-ccccccccHHHHHHHHHHcCCEEEEeccccccccCcCCCCccCCcEEE
Q 001586 710 DAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1049)
Q Consensus 710 d~~g~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~Pg~~GaDi~~ 788 (1049)
+ |+++++++++ ++|++|++++|+ .+|.+. |+++|+++||++|+++++|+++.. +.+..|...|+|+++
T Consensus 132 ~-----d~e~l~~~i~---~~tklV~le~p~Np~G~v~-dl~~I~~la~~~gi~livD~a~a~--~~~~~~~~~g~Divv 200 (391)
T TIGR01328 132 A-----IPEEVKAHIK---DNTKIVYFETPANPTMKLI-DMERVCRDAHSQGVKVIVDNTFAT--PMLTNPVALGVDVVV 200 (391)
T ss_pred C-----CHHHHHHhhc---cCCeEEEEECCCCCCCccc-CHHHHHHHHHHcCCEEEEECCCch--hccCCchhcCCCEEE
Confidence 4 8999999997 789999999995 589887 799999999999999999998643 223456678999999
Q ss_pred eCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhH
Q 001586 789 LNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGL 868 (1049)
Q Consensus 789 ~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl 868 (1049)
.|++|+|+.+ |++.+|+++.++++...+.. .+ .....+...+ + . .+|. ...+-+.+
T Consensus 201 ~S~sK~lgg~---g~~~gG~v~~~~~li~~l~~--~~---------~~~~~g~~l~-~----~---~a~l--~l~~L~tl 256 (391)
T TIGR01328 201 HSATKYIGGH---GDVVAGLICGKAELLQQIRM--VG---------IKDMTGSVIS-P----F---DAWL--ILRGLKTL 256 (391)
T ss_pred ccccccccCC---CCceEEEEEcCHHHHHHHHH--HH---------HHhCCCCCCC-c----H---HHHH--HHhCcCcH
Confidence 9999998522 33346888887765544320 00 0000111111 1 1 1232 33345556
Q ss_pred HHHHHHHHHHHHHHHHHHhcc---CCeeecc
Q 001586 869 TEASKIAILNANYMAKRLEKH---YPILFRG 896 (1049)
Q Consensus 869 ~~~~~~~~~~a~yL~~~L~~~---~~v~~~g 896 (1049)
..+.++..+++.++++.|+++ -.+.|+|
T Consensus 257 ~~r~~~~~~na~~la~~L~~~p~v~~v~yp~ 287 (391)
T TIGR01328 257 NIRMKRHSENAMKVAEYLKSHPAVEKVYYPG 287 (391)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCccEEECCC
Confidence 667778888999999999875 2355655
No 293
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.62 E-value=7e-14 Score=163.63 Aligned_cols=212 Identities=20% Similarity=0.187 Sum_probs=155.0
Q ss_pred HHHHHHHHHHhCCCCcceEeccchHHHHHHHHHHhhhccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCcch---
Q 001586 214 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKD--- 290 (1049)
Q Consensus 214 ~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a~~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~~~~--- 290 (1049)
.++++.+|++.|.+ ++.++.+|++++.++++++ .. +||+||+++..|+.+...+...++..|++++++|..+
T Consensus 73 ~~le~~lA~l~g~~--~al~~~sG~~Ai~~~l~al-l~--~Gd~Vl~~~~~~~~t~~~~~~~~~~~G~~v~~vd~~d~~~ 147 (403)
T PRK07810 73 SMFEERLRLIEGAE--ACFATASGMSAVFTALGAL-LG--AGDRLVAARSLFGSCFVVCNEILPRWGVETVFVDGEDLSQ 147 (403)
T ss_pred HHHHHHHHHHhCCC--cEEEECChHHHHHHHHHHH-hC--CCCEEEEccCCcchHHHHHHHHHHHcCcEEEEECCCCHHH
Confidence 45778999999976 4778899998888877665 23 8999999999998888777766777899999998654
Q ss_pred hhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCCCC
Q 001586 291 IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGG 367 (1049)
Q Consensus 291 l~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~p~~~GaDivvgs~-k~lg~P~~~GG 367 (1049)
+++ ++++|++|++++| |++|.+.|+++|+++||++|++++|+ +.++.+....|.++|+||+++|+ |.|++ .|.
T Consensus 148 l~~ai~~~tklV~~esp~Nptg~v~dl~~I~~la~~~g~~vivD-~a~a~~~~~~~~~~gaDivv~S~tK~l~g---~g~ 223 (403)
T PRK07810 148 WEEALSVPTQAVFFETPSNPMQSLVDIAAVSELAHAAGAKVVLD-NVFATPLLQRGLPLGADVVVYSGTKHIDG---QGR 223 (403)
T ss_pred HHHhcCcCceEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEE-CCCCccccCChhhcCCcEEEccCCceecC---CcC
Confidence 555 7889999999998 79999999999999999999999994 45666666667789999999998 76653 122
Q ss_pred CceEEEEEchhHHhc-CCCceeeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcchHHHH
Q 001586 368 PHAAFLATSQEYKRM-MPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTI 446 (1049)
Q Consensus 368 P~~G~l~~~~~l~~~-lpgrivG~s~d~~g~~~~~l~lqtreq~irrekaTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i 446 (1049)
.-+|+++++++.+.. +- ..++..|. | .++ ..|+ +...+-+-+..+
T Consensus 224 ~~gG~v~~~~~~~~~~l~-------------------------~~~~~~g~---~-~s~---~~a~--l~l~~L~tl~~R 269 (403)
T PRK07810 224 VLGGAILGDREYIDGPVQ-------------------------KLMRHTGP---A-LSA---FNAW--VLLKGLETLALR 269 (403)
T ss_pred ceeEEEEeChHHHHHHHH-------------------------HHHHHhCC---C-CCH---HHHH--HHHhccCcHHHH
Confidence 235788877654421 10 00011111 0 011 1222 244555666777
Q ss_pred HHHHHHHHHHHHHHhhcCCCeE
Q 001586 447 AQRVHGLAGTFALGLKKLGTVE 468 (1049)
Q Consensus 447 a~~~~~~a~~l~~~L~~~g~~~ 468 (1049)
.++..+++.++++.|++...++
T Consensus 270 ~~~~~~~a~~~a~~L~~~p~v~ 291 (403)
T PRK07810 270 VRHSNASALRIAEFLEGHPAVR 291 (403)
T ss_pred HHHHHHHHHHHHHHHhcCCCcc
Confidence 7788899999999999875453
No 294
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=99.62 E-value=6e-14 Score=166.66 Aligned_cols=291 Identities=16% Similarity=0.204 Sum_probs=181.3
Q ss_pred HHHHHHHHHHhhC-CCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEE-EcCCCCCccHHHHHh------------
Q 001586 634 FNNLGEWLCTITG-FDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAM------------ 699 (1049)
Q Consensus 634 i~el~~~la~l~G-~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VL-ip~saHg~~pa~a~~------------ 699 (1049)
..++.++|++++. ++. .++.+||+++++++++.+|+| ++|++|| ...++||........
T Consensus 141 ~~~lAe~l~~~~p~~~~-v~f~~SGsEA~e~AlklAR~~------tgr~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~ 213 (474)
T PLN02482 141 ENVLAEMVIDAVPSVEM-VRFVNSGTEACMGVLRLARAY------TGREKIIKFEGCYHGHADSFLVKAGSGVATLGLPD 213 (474)
T ss_pred HHHHHHHHHHhCCCCCE-EEEeCChHHHHHHHHHHHHHh------cCCCEEEEECCccCCCcchhhhhcCCCccccCCCC
Confidence 3477888888874 343 467899999999999988887 2456666 677899965332111
Q ss_pred -cCC------EEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-Cccccccc---cHHHHHHHHHHcCCEEEEecc
Q 001586 700 -CGM------KIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDGA 768 (1049)
Q Consensus 700 -~G~------~Vv~V~~d~~g~iD~~~L~~~i~~~~~~taaV~it~P-n~~G~i~~---di~eI~~lah~~G~ll~vD~A 768 (1049)
.|+ ++..+|. .|+++|++.++++.+++++|+++.. +..|.+.| .+++|.++|++||+++++|++
T Consensus 214 ~~g~~~~~~~~~~~~~~-----nd~~~l~~~l~~~~~~iAavI~Epv~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV 288 (474)
T PLN02482 214 SPGVPKAATSATLTAPY-----NDLEAVKKLFEANKGEIAAVILEPVVGNSGFIVPKKEFLEGLREITKENGALLVFDEV 288 (474)
T ss_pred CCCCCCCCCCCeEEecC-----CChHHHHHHHHhCCCceEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecc
Confidence 111 1222333 3899999999877778888877754 45677653 377999999999999999997
Q ss_pred ccccccCcCCCCc------c--CCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCC
Q 001586 769 NMNAQVGLTSPGY------I--GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLG 840 (1049)
Q Consensus 769 ~~~a~~gl~~Pg~------~--GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~ 840 (1049)
+ .|+ +.+. + .+|++++ .|.+ ++|-| +|.++.++++++.+... +. .
T Consensus 289 ~----tGf-R~g~~ga~~~~gv~PDi~t~--gK~l----ggG~P-igav~g~~ei~~~~~~~--~~-------------~ 341 (474)
T PLN02482 289 M----TGF-RIAYGGAQEYFGITPDLTTL--GKVI----GGGLP-VGAYGGRREIMEMVAPA--GP-------------M 341 (474)
T ss_pred c----cCe-ecCcchHhHHhCCCCCEEEe--cchh----hCCCc-eEEEEEcHHHHHhhccC--CC-------------c
Confidence 5 343 2221 2 3688776 4766 34445 55557787777655210 00 0
Q ss_pred CCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc-----CCeeeccCCCceeeEEEEec-cCc--
Q 001586 841 TIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-----YPILFRGVNGTVAHEFIVDL-RGL-- 912 (1049)
Q Consensus 841 ~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~-----~~v~~~g~~g~~~~e~iv~~-~~~-- 912 (1049)
...+++.|+++.++++.+.|..+..+++. ++...+.++|+++|+++ +.+...+..+.+..+|.-+. ..+
T Consensus 342 ~~~~T~~gnpl~~aAala~L~~l~~~~~~---~~~~~~g~~l~~~L~~l~~~~g~~~~~~~v~g~~gi~f~~~~~~~~~~ 418 (474)
T PLN02482 342 YQAGTLSGNPLAMTAGIHTLKRLQQPGTY---EYLDKITKKLIQGILEAGKKAGHEMCGGYISGMFGFFFTEGPVYNFAD 418 (474)
T ss_pred ccccCcchhHHHHHHHHHHHHHHhccCHH---HHHHHHHHHHHHHHHHHHHhcCCCEEEcccceEEEEEEecCCccChhh
Confidence 11122446777778888889888665543 45556788999999875 22221111121111221110 000
Q ss_pred -cccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEccCCCCHHHHHHHHHHHHHHHHH
Q 001586 913 -KNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREE 971 (1049)
Q Consensus 913 -~~~~g~~~~~v~k~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~eeid~fv~aL~~i~~~ 971 (1049)
+..+......+.+.|.++|+.+....++. + .|+..+|++|||++++++.+++.+
T Consensus 419 ~~~~d~~~~~~~~~~l~~~Gv~~~~~~~~~-~----~psl~ht~~dId~~l~al~~~l~~ 473 (474)
T PLN02482 419 AKKSDTAKFARFHRGMLEEGVYLAPSQFEA-G----FTSLAHTEEDIDFTIAAAERVLAR 473 (474)
T ss_pred hccCCHHHHHHHHHHHHHCCeEEeccCCCC-C----cCCCCCCHHHHHHHHHHHHHHHHh
Confidence 00000113467788899999875443322 1 267788999999999999998765
No 295
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.62 E-value=6.6e-14 Score=163.15 Aligned_cols=277 Identities=17% Similarity=0.190 Sum_probs=179.4
Q ss_pred HhhhHHHHHHHHHHHHHHHhCCCCcceEeccchHHHHHHHHHHhhhccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEE
Q 001586 205 IAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVV 284 (1049)
Q Consensus 205 ~sqg~le~l~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a~~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~ 284 (1049)
..+|..+...++++.+++++|.+. ..+..+|+.+.++++.++ . ++||+|++++..|+++...++. .|++++
T Consensus 72 ~~~g~~~l~~~l~~~l~~~~g~~~--~i~~~sG~~a~~~a~~~~-~--~~gd~vi~~~~~~~~~~~~~~~----~g~~~~ 142 (385)
T TIGR01825 72 TIAGTLRLHEELEEKLAKFKKTEA--ALVFQSGFNTNQGVLSAL-L--RKGDIVLSDELNHASIIDGLRL----TKATKK 142 (385)
T ss_pred cccCCcHHHHHHHHHHHHHhCCCc--EEEECcHHHHHHHHHHHh-C--CCCCEEEEEccccHHHHHHHHh----cCCceE
Confidence 346777778888999999999753 345556666666444443 2 3889999999999998877653 355554
Q ss_pred E---eCcchhhc-c----CCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCC---------CCc
Q 001586 285 V---SDLKDIDY-K----SGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKP---------PGE 346 (1049)
Q Consensus 285 ~---v~~~~l~~-l----~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~---------p~~ 346 (1049)
. +|++++++ + ++++++|++.++ |.+|.+.|+++|.++||++|++++++ +..+.+.+.. .-.
T Consensus 143 ~~~~~d~~~l~~~l~~~~~~~~~~v~~~~v~~~tG~~~~~~~i~~l~~~~~~~li~D-e~~~~~~~~~~~~~~~~~~~~~ 221 (385)
T TIGR01825 143 IYKHADMDDLDRVLRENPSYGKKLIVTDGVFSMDGDVAPLPEIVELAERYGAVTYVD-DAHGSGVMGEAGRGTVHHFGLE 221 (385)
T ss_pred EeCCCCHHHHHHHHHhhccCCCeEEEEecCCcCCCCccCHHHHHHHHHHhCCEEEEE-CcccccCcCCCCCccHhhcCCC
Confidence 4 44555654 3 246888877665 78999999999999999999999994 3333332211 112
Q ss_pred ccceEEEecC-ccccccCCCCCCceEEEEEchhHHhcCCCceeeeeecCCCCcceeeecccccccccccccCCCccchhH
Q 001586 347 LGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQA 425 (1049)
Q Consensus 347 ~GaDivvgs~-k~lg~P~~~GGP~~G~l~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irrekaTsni~t~~~ 425 (1049)
.+.||+++|. |.|+.+ + |+++.++++.+.+... ..+ |.+ +| ..++..
T Consensus 222 ~~~~i~~~s~sK~~~~~------g-G~~~~~~~~~~~~~~~---------~~~-~~~-------------~~--~~~~~~ 269 (385)
T TIGR01825 222 DKVDIQVGTLSKAIGVV------G-GYAAGHKELIEYLKNR---------ARP-FLF-------------ST--AQPPAV 269 (385)
T ss_pred cCCcEEEEeccHHhhcC------C-CEEecCHHHHHHHHHh---------Ccc-ccc-------------cC--CCCHHH
Confidence 5789988887 877532 2 6777777776654100 000 100 01 001122
Q ss_pred HHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEcCCCCcceEEEecCC---HHHHHHHHHHcCCeeeee
Q 001586 426 LLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD---AHAIASAAYKIEMNLRVV 502 (1049)
Q Consensus 426 l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~g~~~v~~~~~~~~v~i~~~~---~~~v~~~L~~~gI~~~~~ 502 (1049)
..+..+++ ..+... .++.++..++.+++.+.|+++| +++..+. .+.+.+..+. ..++.+.|.++||.++..
T Consensus 270 ~~a~~~al--~~~~~~--~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~-~~~~~~~~~~~~~~~~~~~~L~~~gi~v~~~ 343 (385)
T TIGR01825 270 VAALAAAV--DELQRS--PELMERLWDNTRFFKAGLGKLG-YDTGGSE-TPITPVVIGDEKAAQEFSRRLFDEGIFAQSI 343 (385)
T ss_pred HHHHHHHH--HHHhcC--HHHHHHHHHHHHHHHHHHHHcC-CCCCCCC-CCEEEEEECCHHHHHHHHHHHHHCCcEEccc
Confidence 23444443 222111 2466777788999999999887 7766321 1223333332 568999999999987431
Q ss_pred -------cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001586 503 -------DSNTVTASFDETTTLEDVDKLFIVFAG 529 (1049)
Q Consensus 503 -------~~~~vris~~~~~t~edid~lv~aL~~ 529 (1049)
....+|++++.++|++||++++++|+.
T Consensus 344 ~~~~~~~~~~~iRi~~~~~~~~e~i~~~~~~l~~ 377 (385)
T TIGR01825 344 VFPTVPRGTARIRNIPTAEHTKDDLDQALDAYEK 377 (385)
T ss_pred CCCCCCCCCceEEEEEcCCCCHHHHHHHHHHHHH
Confidence 125799999999999999999999963
No 296
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=99.62 E-value=1.9e-13 Score=162.42 Aligned_cols=297 Identities=18% Similarity=0.207 Sum_probs=188.0
Q ss_pred HHHHHHHHHHhhCCC-ccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEE-EcCCCCCccHHHHHhcCC---------
Q 001586 634 FNNLGEWLCTITGFD-SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGM--------- 702 (1049)
Q Consensus 634 i~el~~~la~l~G~~-~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VL-ip~saHg~~pa~a~~~G~--------- 702 (1049)
..++.+.|+++++.. ...++.+||+++++++++.+|.| . +|.+|| +..+.||....+....|-
T Consensus 115 ~~~lae~L~~~~p~~~~~v~f~~sGseAve~AlklAr~~---t---gr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~ 188 (459)
T PRK06082 115 AIECAEKLTEIAGGELNRVLFAPGGTSAIGMALKLARHI---T---GNFKVVSLWDSFHGASLDAISVGGEACFRQGMGP 188 (459)
T ss_pred HHHHHHHHHHhCCCCCCEEEECCCcHHHHHHHHHHHHHh---c---CCCEEEEEeCCCcCccHHHHhhcCCcccccCCCC
Confidence 457888999998632 23577899999999999988876 2 345555 678899986544332221
Q ss_pred ---EEEEEcCCCC-----CCC------CHHHHHHHHHhcCCCeEEEEEEcCCcccccccc---HHHHHHHHHHcCCEEEE
Q 001586 703 ---KIVSVGTDAK-----GNI------NIEELRKAAEANRDNLSTLMVTYPSTHGVYEEG---IDEICKIIHDNGGQVYM 765 (1049)
Q Consensus 703 ---~Vv~V~~d~~-----g~i------D~~~L~~~i~~~~~~taaV~it~Pn~~G~i~~d---i~eI~~lah~~G~ll~v 765 (1049)
.+..+|.... ... ++++|++.++++ +++++|+++.....|.+.++ +++|.++|++||+++++
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~-~~vAavIvEPv~g~g~~~~~~~yl~~lr~lc~~~g~llI~ 267 (459)
T PRK06082 189 LMAGVERIPPAVSYRGAFPDADGSDVHYADYLEYVIEKE-GGIGAFIAEAVRNTDVQVPSKAYWKRVREICDKHNVLLII 267 (459)
T ss_pred CCCCCEEeCCCcccccccCChhHHHHHHHHHHHHHHhcC-CCEEEEEECCccCCCCcCCCHHHHHHHHHHHHHcCCEEEE
Confidence 1333442111 011 246688888754 57888888754333544334 99999999999999999
Q ss_pred eccccccccCcCCCCcc--------CCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCC
Q 001586 766 DGANMNAQVGLTSPGYI--------GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQ 837 (1049)
Q Consensus 766 D~A~~~a~~gl~~Pg~~--------GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~ 837 (1049)
|++ +.|+.+.|.+ -+|++++ .|.+ ++|+-.+|.+++++++.....+..
T Consensus 268 DEV----~tG~GRtG~~fa~e~~gv~PDiv~~--gKgl----~gG~~P~~av~~~~~i~~~~~~~~-------------- 323 (459)
T PRK06082 268 DEI----PNGMGRTGEWFTHQAYGIEPDILCI--GKGL----GGGLVPIAAMITKDKYNTAAQISL-------------- 323 (459)
T ss_pred ech----hhCCCccchhhHhHhhCCCCCEEEe--cccc----cCCCCcceEEEEcHHHHhhccCCC--------------
Confidence 997 4566666633 3698886 4766 345423566666766554332100
Q ss_pred CCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc---CCee--eccCCCce-eeEEEEeccC
Q 001586 838 PLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPIL--FRGVNGTV-AHEFIVDLRG 911 (1049)
Q Consensus 838 ~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~---~~v~--~~g~~g~~-~~e~iv~~~~ 911 (1049)
. . +++.|+++.++++.+.|..+.++++. ++..++.++|.++|+++ +.++ ..|. |.. ..+|+-+...
T Consensus 324 --~-~-~T~~gnpl~~aaa~a~L~~l~~~~l~---~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~-Gl~~~ve~~~~~~~ 395 (459)
T PRK06082 324 --G-H-YTHEKSPLGCAAALATIEVIEQEGLL---EKVKADSQFMRERLLEMKAKYPLIGDVRGI-GLLWGVELVTDRHT 395 (459)
T ss_pred --C-C-CCCCcCHHHHHHHHHHHHHHHhcCHH---HHHHHHHHHHHHHHHHHHhhCCCeeeeeec-cceeEEEEccCccc
Confidence 0 1 12345677778888889888766654 45557788999999874 3322 1232 322 1122111100
Q ss_pred ccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEccCCCCHHHHHHHHHHHHHHHHHHH
Q 001586 912 LKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIA 973 (1049)
Q Consensus 912 ~~~~~g~~~~~v~k~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~eeid~fv~aL~~i~~~i~ 973 (1049)
+.........+...+.++|+.+.... .+.++++|....|++|||++++++.+++.++.
T Consensus 396 -~~~~~~~~~~~~~~~~~~Gvl~~~~~---~~~i~~~Ppl~it~~eid~~~~~l~~~l~~~~ 453 (459)
T PRK06082 396 -KERAYDEAEAVLYRCLNNGLSFKVSQ---GNVIQLSPPLIITREELTQALAILEEAIAKIC 453 (459)
T ss_pred -cCccHHHHHHHHHHHHhCCCEEEecC---CCEEEEeCCCccCHHHHHHHHHHHHHHHHHHh
Confidence 00000013467777889999874322 47899999999999999999999999887753
No 297
>PRK06290 aspartate aminotransferase; Provisional
Probab=99.62 E-value=1.3e-13 Score=162.21 Aligned_cols=306 Identities=14% Similarity=0.112 Sum_probs=189.4
Q ss_pred hcHHHHHHHHHHHHHHhhCCC---cc-ccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCE
Q 001586 628 QGYQEMFNNLGEWLCTITGFD---SF-SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMK 703 (1049)
Q Consensus 628 ~G~~~~i~el~~~la~l~G~~---~~-~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~ 703 (1049)
+|..++...+.+++.+.+|.+ .. .+..++|++.- ...+++.+. .+++.|+++...+..+...++..|.+
T Consensus 81 ~G~~~lr~aia~~~~~~~g~~~~~~~~~I~it~Gs~~a--l~~~~~~~~-----~~gd~Vlv~~P~y~~~~~~~~~~g~~ 153 (410)
T PRK06290 81 NGIQEFKEAAARYMEKVFGVKDIDPVTEVIHSIGSKPA--LAMLPSCFI-----NPGDVTLMTVPGYPVTGTHTKYYGGE 153 (410)
T ss_pred CCcHHHHHHHHHHHHHHcCCCcCCCcceEEEccCHHHH--HHHHHHHhC-----CCCCEEEEeCCCCccHHHHHHHcCCE
Confidence 466666666777776666754 33 46666776522 223333321 25788999887766666678899999
Q ss_pred EEEEcCCCC--CCCCHHHHHHHHHhcCCCeEEEEEEcCC-cccccc--ccHHHHHHHHHHcCCEEEEecccccc-ccCcC
Q 001586 704 IVSVGTDAK--GNINIEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMNA-QVGLT 777 (1049)
Q Consensus 704 Vv~V~~d~~--g~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~--~di~eI~~lah~~G~ll~vD~A~~~a-~~gl~ 777 (1049)
++.++++++ ..+|++++++++. +++++|++++|| .+|.+- +.+++|.++|+++|+++++|.++..- ..+-.
T Consensus 154 v~~v~~~~~~~~~~d~~~l~~~~~---~~~k~i~l~nP~NPTG~v~s~e~l~~l~~la~~~~~~iI~DEaY~~~~~~~~~ 230 (410)
T PRK06290 154 VYNLPLLEENNFLPDLDSIPKDIK---EKAKLLYLNYPNNPTGAVATKEFYEEVVDFAKENNIIVVQDAAYAALTFDGKP 230 (410)
T ss_pred EEEEecCCCcCCcCCHHHHHHhhc---ccceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecchhhceeCCCC
Confidence 999999764 4679999999886 688999999995 699875 24788999999999999999986421 11100
Q ss_pred CC-----CccCCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHH
Q 001586 778 SP-----GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALI 852 (1049)
Q Consensus 778 ~P-----g~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~ 852 (1049)
.+ ...+.+|++.|+.|.|++| |-++|++++++++...+... ......+++ ...
T Consensus 231 ~s~~~~~~~~~~~I~i~SfSK~~g~~----GlRiG~ii~~~~l~~~l~~~--------------~~~~~~~~~----~~~ 288 (410)
T PRK06290 231 LSFLSVPGAKEVGVEIHSLSKAYNMT----GWRLAFVVGNELIVKAFATV--------------KDNNDSGQF----IAI 288 (410)
T ss_pred cChhcCCCccccEEEEeechhhcCCc----hhheEeEEeCHHHHHHHHHH--------------HhccccCCc----HHH
Confidence 01 1123458888888988543 67799999887665443210 000111110 011
Q ss_pred HHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeEEEEeccCccc-c-CCCCHHHHHHHHHHC
Q 001586 853 LPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKN-T-AGIEPEDVAKRLMDY 930 (1049)
Q Consensus 853 ~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~~~v~~~g~~g~~~~e~iv~~~~~~~-~-~g~~~~~v~k~L~~~ 930 (1049)
..++..++.. .+-+++..+...++.+++.+.|++. .+.+..+.+.++ ++++++.... . ...+..+++++|.++
T Consensus 289 q~aa~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~p~g~f~--l~v~lp~~~~~~~~~~~~~~~~~~Ll~~ 363 (410)
T PRK06290 289 QKAGIYALDH--PEITEKIREKYSRRLDKLVKILNEV-GFKAEMPGGTFY--LYVKAPKGTKSGIKFENAEEFSQYLIKE 363 (410)
T ss_pred HHHHHHHhhC--cHHHHHHHHHHHHHHHHHHHHHHhC-CCeecCCCeeeE--EEEECCCccccCCCCCCHHHHHHHHHHh
Confidence 1112222221 1223344555567788899999875 322212222221 3346542100 0 002577899999988
Q ss_pred Cccc--CCCCCCCCCEEEEEcc-CCCCHHHHHHHHHHHHHHHHHH
Q 001586 931 GFHG--PTMSWPVPGTLMIEPT-ESESKEELDRYCDALISIREEI 972 (1049)
Q Consensus 931 Gi~~--~~~~~p~~~~lri~~t-~~~t~eeid~fv~aL~~i~~~i 972 (1049)
|+.+ +.-.| ++++||+++ ...++++.++|+++|.+.+..+
T Consensus 364 ~~v~~~p~~~~--~~~lRi~~~~~~~~~~~~~~~~~~l~~~~~~~ 406 (410)
T PRK06290 364 KLISTVPWDDA--GHFLRFSVTFEAKDEEEEDRILEEIKRRLSDV 406 (410)
T ss_pred CCEEEECCccc--cCeEEEEEEcccccccchhHHHHHHHHHHhhc
Confidence 6543 32223 478999997 3457889999999999987654
No 298
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.61 E-value=4.5e-14 Score=171.49 Aligned_cols=298 Identities=15% Similarity=0.125 Sum_probs=194.0
Q ss_pred HHHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCEEEEEcCCCC-
Q 001586 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK- 712 (1049)
Q Consensus 634 i~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~Vv~V~~d~~- 712 (1049)
+.|.|+..++++|.+.+-+..|++++|+.++++++. +++++||+++..|-+....+.+.|++.++++...+
T Consensus 197 i~eAe~~AA~~fgAd~tyfvvNGTS~~n~av~~a~~--------~~Gd~VLvdRN~HKSv~haLilsga~PVYl~P~rn~ 268 (714)
T PRK15400 197 HKEAEEYIARVFNADRSYMVTNGTSTANKIVGMYSA--------PAGSTVLIDRNCHKSLTHLMMMSDVTPIYFRPTRNA 268 (714)
T ss_pred HHHHHHHHHHHhCCCcEEEEeCchHHHHHHHHHHhc--------CCCCEEEeecccHHHHHHHHHHcCCeEEEecccccc
Confidence 779999999999999987888988888877776653 26789999999999888888999999999976543
Q ss_pred ----CCCC-----HHHHHHHHHhcCCCeE---EEEEEcCCccccccccHHHHHHHHHHcCCEEEEeccccccccCcC---
Q 001586 713 ----GNIN-----IEELRKAAEANRDNLS---TLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT--- 777 (1049)
Q Consensus 713 ----g~iD-----~~~L~~~i~~~~~~ta---aV~it~Pn~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~--- 777 (1049)
|.++ .+.++++|+++. +.+ ++++++|++.|++. |+++|.+++|.++ ++||+|+.. ...|.
T Consensus 269 ~Gi~g~I~~~~~~~e~i~~~i~~~p-~ak~p~~~vit~pTYdG~~y-d~~~I~~~~~~~~--ilvDEAwga-h~~F~p~~ 343 (714)
T PRK15400 269 YGILGGIPQSEFQHATIAKRVKETP-NATWPVHAVITNSTYDGLLY-NTDFIKKTLDVKS--IHFDSAWVP-YTNFSPIY 343 (714)
T ss_pred cCCccCCCccccCHHHHHHHHHhCc-cccCccEEEEECCCCccEec-CHHHHHHHhCCCC--EEEEccchh-hhccCccc
Confidence 4566 899999998764 333 79999999999998 8999999999887 689998642 22221
Q ss_pred ---CCCccCC---c--EEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCC-CCCCCccchh
Q 001586 778 ---SPGYIGA---D--VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQP-LGTIAAAPWG 848 (1049)
Q Consensus 778 ---~Pg~~Ga---D--i~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~-t~~i~sa~~g 848 (1049)
++-..|+ | +++.|.||+++. --..+.|-++.. +.-..+ ..... ...++ ..|.
T Consensus 344 ~~~sam~~ga~~~~~i~vtQStHKtL~a-----lTQaS~LHvkg~----vd~~~~---------n~a~~m~~STS-PsY~ 404 (714)
T PRK15400 344 EGKCGMSGGRVEGKVIYETQSTHKLLAA-----FSQASMIHVKGD----VNEETF---------NEAYMMHTTTS-PHYG 404 (714)
T ss_pred CCcChhhcCCCCCCceEEEEchhhcccc-----hhHHhHHHHcCC----CCHHHH---------HHHHHHHcCCC-cHHH
Confidence 1223466 5 999999999851 112233333221 100000 00000 01111 1222
Q ss_pred hHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhccC--------Ceeec------------------cCC----
Q 001586 849 SALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHY--------PILFR------------------GVN---- 898 (1049)
Q Consensus 849 ~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~~--------~v~~~------------------g~~---- 898 (1049)
..+.+-.+.++|.. ..| ++..+..++.+..++++|.++- ++.-+ |-.
T Consensus 405 l~ASLD~a~~~m~~--~~G-~~l~~~~i~~a~~~R~~l~~~~~~~~~w~~~~~~~~~~~~~~~w~~~p~~~whgf~~~~~ 481 (714)
T PRK15400 405 IVASTETAAAMMKG--NAG-KRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNIDN 481 (714)
T ss_pred HHHHHHHHHHHHHh--hhh-HHHHHHHHHHHHHHHHHHHhCCCcccCceEEecChhhcccchhcccCccccccCcccccc
Confidence 22222333333332 234 3345566777778888886541 11100 000
Q ss_pred -----CceeeEEEEeccCccc-----cCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEccCCCCHHHHHHHHHHHHHH
Q 001586 899 -----GTVAHEFIVDLRGLKN-----TAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISI 968 (1049)
Q Consensus 899 -----g~~~~e~iv~~~~~~~-----~~g~~~~~v~k~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~eeid~fv~aL~~i 968 (1049)
+|. -+++.++.+.. ..|+++..+++.|.++||.+-... ...+++.++..+|++++++|+++|.++
T Consensus 482 ~~~~lDP~--Klti~tpgi~~~g~~~~~Gipg~~v~~~L~e~gI~~E~~d---~~~iLfl~s~g~t~~~~~~L~~aL~~f 556 (714)
T PRK15400 482 EHMYLDPI--KVTLLTPGMKKDGTMSDFGIPASIVAKYLDEHGIVVEKTG---PYNLLFLFSIGIDKTKALSLLRALTDF 556 (714)
T ss_pred cccccCCc--eEEEEeCCCCCCccccccCCCHHHHHHHHHHcCCEEEecC---CCeEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 111 12233222111 146788899999999999875433 478899999999999999999999988
Q ss_pred HHH
Q 001586 969 REE 971 (1049)
Q Consensus 969 ~~~ 971 (1049)
.+.
T Consensus 557 ~~~ 559 (714)
T PRK15400 557 KRA 559 (714)
T ss_pred HHh
Confidence 554
No 299
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.61 E-value=6.7e-14 Score=161.67 Aligned_cols=282 Identities=14% Similarity=0.139 Sum_probs=177.0
Q ss_pred HHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCEEEEEcCCCCCC
Q 001586 635 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGN 714 (1049)
Q Consensus 635 ~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~Vv~V~~d~~g~ 714 (1049)
.++++.+++.++.+...+..++|++. +...+++.+. .++++|+++...++.+...+...|.+++.+|++ ++.
T Consensus 67 ~~lr~~ia~~~~~~~~~i~~t~G~~~--~l~~~~~~~~-----~~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~-~~~ 138 (359)
T PRK03158 67 PELRTKVAKHLGVDEEQLLFGAGLDE--VIQMISRALL-----NPGTNTVMAEPTFSQYRHNAIIEGAEVREVPLK-DGG 138 (359)
T ss_pred HHHHHHHHHHhCCCHHHEEECCCHHH--HHHHHHHHHh-----CCCCEEEEcCCCHHHHHHHHHHcCCeEEEEecC-CCC
Confidence 36778888888887655555555542 2223334332 256789988765444444577889999999997 677
Q ss_pred CCHHHHHHHHHhcCCCeEEEEEEcCC-ccccccccHHHHHHHHHH--cCCEEEEeccccccc-cCc-CCC----CccCCc
Q 001586 715 INIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHD--NGGQVYMDGANMNAQ-VGL-TSP----GYIGAD 785 (1049)
Q Consensus 715 iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~~di~eI~~lah~--~G~ll~vD~A~~~a~-~gl-~~P----g~~GaD 785 (1049)
+|+++++++++ +++++|++++|+ .+|.+- +.+++.++++. +|+++++|+++..-. .+. ..+ ...+-.
T Consensus 139 ~d~~~l~~~~~---~~~~~v~i~~p~NPtG~~~-~~~~l~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~v 214 (359)
T PRK03158 139 HDLEAMLKAID---EQTKIVWICNPNNPTGTYV-NHEELLSFLESVPSHVLVVLDEAYYEYVTAEDYPDTLPLLEKYENL 214 (359)
T ss_pred cCHHHHHHhcC---CCCCEEEEeCCCCCCCCCC-CHHHHHHHHHhCCCCcEEEEECchHhhcCCcccccHHHHHHhcCCE
Confidence 99999999886 688899999995 699987 68888888876 599999999864211 110 011 112344
Q ss_pred EEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHch
Q 001586 786 VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGS 865 (1049)
Q Consensus 786 i~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~ 865 (1049)
+++.++.|+|++| |-++|++++++++...+-.. + .+.+++ .....++++++. ..
T Consensus 215 i~~~S~SK~~g~~----GlRiG~~v~~~~~~~~~~~~------------~--~~~~~~------~~~q~~~~~~l~--~~ 268 (359)
T PRK03158 215 IVLRTFSKAYGLA----ALRVGYGIASEELIEKLNIA------------R--PPFNTT------RIAQYAAIAALE--DQ 268 (359)
T ss_pred EEEEechHhhcCc----chhhehhcCCHHHHHHHHHh------------c--CCCCCC------HHHHHHHHHHhc--CH
Confidence 7777888887533 56679999887665443100 0 011111 122222333332 12
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHHHCCcccCC-CCCCCCCE
Q 001586 866 KGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPT-MSWPVPGT 944 (1049)
Q Consensus 866 eGl~~~~~~~~~~a~yL~~~L~~~~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~-~~~p~~~~ 944 (1049)
+-+++..+....+.+++.+.|++. .+.+..+.+.+ +.++++ .+..++.++|.++|+.+.. ..|..+++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~g~~---i~~~~~-------~~~~~~~~~l~~~gv~v~~g~~f~~~~~ 337 (359)
T PRK03158 269 AFLKECVEKNAEGLEQYYAFCKEY-GLFYYPSQTNF---IFVDTG-------RDANELFEALLKKGYIVRSGAALGFPTG 337 (359)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHC-CCeeCCCcCcE---EEEECC-------CCHHHHHHHHHHCCeEEeeCCCCCCCCe
Confidence 223333444455666777777764 22121222322 334442 3567899999999998653 23434689
Q ss_pred EEEEccCCCCHHHHHHHHHHHHHH
Q 001586 945 LMIEPTESESKEELDRYCDALISI 968 (1049)
Q Consensus 945 lri~~t~~~t~eeid~fv~aL~~i 968 (1049)
+||++. +.+|+|+|+++|+++
T Consensus 338 iRi~~~---~~~~~~~l~~al~~~ 358 (359)
T PRK03158 338 VRITIG---LKEQNDKIIELLKEL 358 (359)
T ss_pred EEEecC---CHHHHHHHHHHHHHh
Confidence 999975 789999999999876
No 300
>PRK05968 hypothetical protein; Provisional
Probab=99.61 E-value=4e-14 Score=165.15 Aligned_cols=282 Identities=14% Similarity=0.129 Sum_probs=180.3
Q ss_pred HHHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccH----HHHHhcCCEEEEEcC
Q 001586 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNP----ATAAMCGMKIVSVGT 709 (1049)
Q Consensus 634 i~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~p----a~a~~~G~~Vv~V~~ 709 (1049)
..++++.+++++|.+.. +..++|+.|...++++. . +++++||++...|+.+. ..+...|++++.++.
T Consensus 65 ~~~le~~lA~l~g~~~a-v~~~sG~~Ai~~al~al---~-----~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~ 135 (389)
T PRK05968 65 VRAFEEMLAKLEGAEDA-RGFASGMAAISSTVLSF---V-----EPGDRIVAVRHVYPDAFRLFETILKRMGVEVDYVDG 135 (389)
T ss_pred HHHHHHHHHHHhCCCcE-EEECCHHHHHHHHHHHH---h-----CCCCEEEEeCCCchHHHHHHHHHHHHcCceEEEeCC
Confidence 45788999999998765 44567766664444332 1 25688998877665433 235568999999886
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-ccccccccHHHHHHHHHHcCCEEEEeccccccccCcCCCCccCCcEEE
Q 001586 710 DAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1049)
Q Consensus 710 d~~g~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~Pg~~GaDi~~ 788 (1049)
+ |++++++++ ++|++|++++|+ ..+.+. |+++|+++||++|+++++|+++.. ..+..|-.+|+|+++
T Consensus 136 ~-----d~~~l~~~i----~~tklV~ie~pt~~~~~~~-dl~~i~~la~~~gi~vivD~a~a~--~~~~~p~~~g~Divv 203 (389)
T PRK05968 136 R-----DEEAVAKAL----PGAKLLYLESPTSWVFELQ-DVAALAALAKRHGVVTMIDNSWAS--PVFQRPITLGVDLVI 203 (389)
T ss_pred C-----CHHHHHHhc----ccCCEEEEECCCCCCCcHH-HHHHHHHHHHHcCCEEEEECCCcc--hhccCchhcCCcEEE
Confidence 3 899999887 367899999995 466666 899999999999999999998642 223456678999999
Q ss_pred eCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCC-CCCccchhhHHHHHHHHHHHHHHchhh
Q 001586 789 LNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLG-TIAAAPWGSALILPISYTYIAMMGSKG 867 (1049)
Q Consensus 789 ~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~-~i~sa~~g~~~~~~~a~a~l~~lG~eG 867 (1049)
.|++|+|+.| |++++|+++.++++...+.... . ...+ .++ + ..+| +...+-+.
T Consensus 204 ~S~tK~l~g~---~~~~gG~i~~~~~~~~~l~~~~-----------~-~~~g~~~~--~-------~~A~--~~l~~L~t 257 (389)
T PRK05968 204 HSASKYLGGH---SDTVAGVVAGSKEHIARINAEA-----------Y-PYLGAKLS--P-------FEAW--LLLRGLRT 257 (389)
T ss_pred eeccccccCC---CCeEEEEEEECHHHHHHHHHHH-----------H-HhCCCCCC--h-------HHHH--HHHcccCc
Confidence 9999998622 4456788888776554321000 0 0011 111 1 1122 23445556
Q ss_pred HHHHHHHHHHHHHHHHHHHhcc--C-CeeeccCCC-------ceeeEEEEeccCccccCCCCHHHHHHHHHHCCcccC--
Q 001586 868 LTEASKIAILNANYMAKRLEKH--Y-PILFRGVNG-------TVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGP-- 935 (1049)
Q Consensus 868 l~~~~~~~~~~a~yL~~~L~~~--~-~v~~~g~~g-------~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~-- 935 (1049)
+..+.++..+++.++++.|+++ + .+.|++... .....+.|++. .+.+..++.++|...++.++
T Consensus 258 l~~r~~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~g~g~~~sf~~~-----~~~~~~~f~~~L~~~~~~~s~G 332 (389)
T PRK05968 258 LPLRMKAHEASALEIARRLKAHPVVERVCHPALANHPPAGLSGTSGLFSFIFR-----EGIDVRAFADALKLFRLGVSWG 332 (389)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCChHHhCCCCceEEEEEEC-----CHHHHHHHHHhCCccEEecCCC
Confidence 7777788888999999999976 3 233443111 01113445543 13456778888876554321
Q ss_pred ---C-CC---------C--------CC-CCEEEEEccCCCCHHHHHHHHHHHHHHHHH
Q 001586 936 ---T-MS---------W--------PV-PGTLMIEPTESESKEELDRYCDALISIREE 971 (1049)
Q Consensus 936 ---~-~~---------~--------p~-~~~lri~~t~~~t~eeid~fv~aL~~i~~~ 971 (1049)
+ +. . .+ .+.+|+|+... +.|.++++|++.++.
T Consensus 333 ~~~slv~p~~~~~~~~~~~~~~~~~gi~~~liR~SvGlE----~~~dl~~dl~~al~~ 386 (389)
T PRK05968 333 GHESLVVPAEVVLQQKAQPNSAARFGVSPRSVRLHVGLE----GTEALWADLEQALAA 386 (389)
T ss_pred CCCceeeeCcccccccCCHHHHHhcCCCCCeEEEEeccC----CHHHHHHHHHHHHHH
Confidence 1 00 0 01 46899999764 455566666666554
No 301
>PRK08361 aspartate aminotransferase; Provisional
Probab=99.61 E-value=6.7e-14 Score=163.68 Aligned_cols=300 Identities=17% Similarity=0.179 Sum_probs=182.9
Q ss_pred hcHHHHHHHHHHHHHHhhCCC--cccccc-CchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCEE
Q 001586 628 QGYQEMFNNLGEWLCTITGFD--SFSLQP-NAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKI 704 (1049)
Q Consensus 628 ~G~~~~i~el~~~la~l~G~~--~~~l~~-~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~V 704 (1049)
+|..++...+.+++.+.+|.+ ...+.. ++++++.. ++++.+. .++++|+++...|......+...|+++
T Consensus 70 ~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~---~~~~~l~-----~~g~~Vlv~~p~y~~~~~~~~~~g~~~ 141 (391)
T PRK08361 70 AGIPELREAIAEYYKKFYGVDVDVDNVIVTAGAYEATY---LAFESLL-----EEGDEVIIPDPAFVCYVEDAKIAEAKP 141 (391)
T ss_pred CCcHHHHHHHHHHHHHHhCCCCCcccEEEeCChHHHHH---HHHHHhc-----CCCCEEEEcCCCCcccHHHHHHcCCEE
Confidence 466666666666666655643 333333 44444443 3333321 256789999988877777788899999
Q ss_pred EEEcCCCC--CCCCHHHHHHHHHhcCCCeEEEEEEcCC-cccccccc---HHHHHHHHHHcCCEEEEeccccccc-cCcC
Q 001586 705 VSVGTDAK--GNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEG---IDEICKIIHDNGGQVYMDGANMNAQ-VGLT 777 (1049)
Q Consensus 705 v~V~~d~~--g~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~~d---i~eI~~lah~~G~ll~vD~A~~~a~-~gl~ 777 (1049)
+.++++++ +.+|+++|+++++ +++++|++++|+ .+|.+- + +++|+++|+++++++++|+++..-. .+-.
T Consensus 142 ~~v~~~~~~~~~~d~~~l~~~i~---~~~~~v~i~~p~NPtG~~~-~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~ 217 (391)
T PRK08361 142 IRIPLREENEFQPDPDELLELIT---KRTRMIVINYPNNPTGATL-DKEVAKAIADIAEDYNIYILSDEPYEHFLYEGAK 217 (391)
T ss_pred EEEecCCccCCCCCHHHHHHhcc---cccEEEEEeCCCCCCCcCc-CHHHHHHHHHHHHHcCeEEEEEcccccceeCCCC
Confidence 99999764 4699999999997 678999999995 599886 4 8999999999999999999863211 0100
Q ss_pred -CC-C--ccCCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHH
Q 001586 778 -SP-G--YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALIL 853 (1049)
Q Consensus 778 -~P-g--~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~ 853 (1049)
.+ . +...++++.+++|+|+.| |-++|++++++++...+-. . ......++++ ..+
T Consensus 218 ~~~~~~~~~~~~i~~~s~SK~~~~~----GlRiG~~~~~~~~~~~~~~--~----------~~~~~~~~~~--~~q---- 275 (391)
T PRK08361 218 HYPMIKYAPDNTILANSFSKTFAMT----GWRLGFVIAPEQVIKDMIK--L----------HAYIIGNVAS--FVQ---- 275 (391)
T ss_pred CCCHhhcCCCCEEEEecCchhcCCc----HhhhhhhccCHHHHHHHHH--H----------HhhhccCCCh--HHH----
Confidence 01 1 123467888999988543 4458999988765543210 0 0000112221 111
Q ss_pred HHHHHHHHHHch--hhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHH-HC
Q 001586 854 PISYTYIAMMGS--KGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-DY 930 (1049)
Q Consensus 854 ~~a~a~l~~lG~--eGl~~~~~~~~~~a~yL~~~L~~~~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~-~~ 930 (1049)
.++...+. .+. +.+++..+...++.+++.+.|+++..+.+..+.+.++ ++++++. .+.+..+++++|. ++
T Consensus 276 ~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~p~g~~~--~~~~l~~----~~~~~~~l~~~l~~~~ 348 (391)
T PRK08361 276 IAGIEALR-SKESWKAVEEMRKEYNERRKLVLKRLKEMPHIKVFEPKGAFY--VFANIDE----TGMSSEDFAEWLLEKA 348 (391)
T ss_pred HHHHHHhc-CCcccHHHHHHHHHHHHHHHHHHHHHHhCCCCeecCCCEEEE--EEEECCC----CCCCHHHHHHHHHHhC
Confidence 11111221 111 2355555666677788889998742232222222221 3345541 1356788988886 57
Q ss_pred CcccCC-CCCC--CCCEEEEEccCCCCHHHHHHHHHHHHHHHH
Q 001586 931 GFHGPT-MSWP--VPGTLMIEPTESESKEELDRYCDALISIRE 970 (1049)
Q Consensus 931 Gi~~~~-~~~p--~~~~lri~~t~~~t~eeid~fv~aL~~i~~ 970 (1049)
||.+.. ..|. ..+++|+++.. +.++++..++.|+++++
T Consensus 349 gv~v~pg~~f~~~~~~~iRi~~~~--~~~~l~~al~~l~~~l~ 389 (391)
T PRK08361 349 RVVVIPGTAFGKAGEGYIRISYAT--SKEKLIEAMERMEKALE 389 (391)
T ss_pred CEEEcCchhhCCCCCCEEEEEecC--CHHHHHHHHHHHHHHHh
Confidence 998643 2232 24789999874 56677777777666543
No 302
>PRK09105 putative aminotransferase; Provisional
Probab=99.61 E-value=1.1e-13 Score=160.75 Aligned_cols=280 Identities=15% Similarity=0.183 Sum_probs=180.6
Q ss_pred HHHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCEEEEEcCCCCC
Q 001586 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKG 713 (1049)
Q Consensus 634 i~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~Vv~V~~d~~g 713 (1049)
..++++.+++.+|.+...+..+.|++. +..++++.+. .++++|++++..|..+...+++.|.+++.++.++++
T Consensus 80 ~~~Lr~aia~~~~v~~e~I~it~Gs~~--ai~~~~~~l~-----~~gd~Vli~~P~y~~~~~~~~~~g~~~~~v~~~~~~ 152 (370)
T PRK09105 80 EDDLRTLFAAQEGLPADHVMAYAGSSE--PLNYAVLAFT-----SPTAGLVTADPTYEAGWRAADAQGAPVAKVPLRADG 152 (370)
T ss_pred HHHHHHHHHHHhCcChhhEEEcCChHH--HHHHHHHHHc-----CCCCEEEEeCCChHHHHHHHHHcCCeEEEecCCCCC
Confidence 346778888999988766655555542 3334444432 256889999887777777788999999999998788
Q ss_pred CCCHHHHHHHHHhcCCCeEEEEEEcCC-ccccccccHHHHHHHHHH--cCCEEEEeccccccccCcCCCC---ccCCcEE
Q 001586 714 NINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHD--NGGQVYMDGANMNAQVGLTSPG---YIGADVC 787 (1049)
Q Consensus 714 ~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~~di~eI~~lah~--~G~ll~vD~A~~~a~~gl~~Pg---~~GaDi~ 787 (1049)
.+|++++++. . +++++|++++|| .+|.+. +.+++.++++. +|+++++|+++.. +....+.. +...+++
T Consensus 153 ~~d~~~l~~~-~---~~~~~v~l~nP~NPTG~~~-~~~~l~~l~~~~~~~~~lIvDEaY~~-f~~~~s~~~~~~~~~~vi 226 (370)
T PRK09105 153 AHDVKAMLAA-D---PNAGLIYICNPNNPTGTVT-PRADIEWLLANKPAGSVLLVDEAYIH-FSDAPSVVDLVAQRKDLI 226 (370)
T ss_pred CCCHHHHHhc-C---CCCCEEEEeCCCCCCCcCc-CHHHHHHHHHhCCCCcEEEEECchHH-hccCcchHHHHhhCCCEE
Confidence 8999999876 3 568889999995 599887 56777776653 4899999998631 22111111 1234554
Q ss_pred -EeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchh
Q 001586 788 -HLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSK 866 (1049)
Q Consensus 788 -~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~e 866 (1049)
..++.|+|++| |.++|++++++++.+.+-. ......+ . ....++.+++. ..+
T Consensus 227 ~~~SfSK~~g~~----GlRiG~~v~~~~~i~~l~~---------------~~~~~~~-----~-~~~~aa~~~L~--~~~ 279 (370)
T PRK09105 227 VLRTFSKLYGMA----GMRLGLAAARPDLLAKLAR---------------FGHNPLP-----V-PAAAAGLASLR--DPK 279 (370)
T ss_pred EEecccHhhcCC----ccceeeeecCHHHHHHHHh---------------cCCCCcC-----H-HHHHHHHHHHh--CHH
Confidence 45777887543 6779999988766554310 0001111 1 11112222222 122
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHHHCCcccCCCCCC-CCCE
Q 001586 867 GLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWP-VPGT 944 (1049)
Q Consensus 867 Gl~~~~~~~~~~a~yL~~~L~~~-~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~p-~~~~ 944 (1049)
-+++..+...++.+++.+.|++. +.+. .+.+.+ ++++++ .+..++.+.|.++||.++.. |+ .+++
T Consensus 280 ~~~~~~~~~~~~r~~l~~~L~~~g~~~~--~~~~~f---~~~~~~-------~~~~~l~~~L~~~gI~v~~~-~~~~~~~ 346 (370)
T PRK09105 280 LVPQRRAENAAVREDTIAWLKKKGYKCT--PSQANC---FMVDVK-------RPAKAVADAMAKQGVFIGRS-WPIWPNW 346 (370)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCcC--CCCCcE---EEEeCC-------CCHHHHHHHHHHCCcEEecC-CCCCCCe
Confidence 33444455667778888999874 3332 222322 335542 35678999999999988432 33 3589
Q ss_pred EEEEccCCCCHHHHHHHHHHHHHHH
Q 001586 945 LMIEPTESESKEELDRYCDALISIR 969 (1049)
Q Consensus 945 lri~~t~~~t~eeid~fv~aL~~i~ 969 (1049)
+|+++. +.+++++|+++|+++.
T Consensus 347 ~Ris~~---~~~~~~~l~~al~~~~ 368 (370)
T PRK09105 347 VRVTVG---SEEEMAAFRSAFAKVM 368 (370)
T ss_pred EEEEcC---CHHHHHHHHHHHHHHh
Confidence 999986 5789999999998764
No 303
>PLN02509 cystathionine beta-lyase
Probab=99.61 E-value=7.4e-14 Score=165.01 Aligned_cols=212 Identities=18% Similarity=0.186 Sum_probs=148.6
Q ss_pred HHHHHHHHHHHhCCCCcceEeccchHHHHHHHHHHhhhccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCcc---
Q 001586 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK--- 289 (1049)
Q Consensus 213 l~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a~~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~~~--- 289 (1049)
..++++.+|++.|.+. +.++.+|++++.++. ++ .. +||+||+++..|+.+...++......|+++++++..
T Consensus 135 ~~aLE~~lA~leg~e~--ai~~~SG~aAi~~il-~l-l~--~GD~VI~~~~~y~~t~~ll~~~l~~~G~~v~~vd~~d~e 208 (464)
T PLN02509 135 RDALESLLAKLDKADR--AFCFTSGMAALSAVT-HL-IK--NGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNTTNLD 208 (464)
T ss_pred HHHHHHHHHHHhCCCE--EEEeCcHHHHHHHHH-HH-hC--CCCEEEEcCCchhhHHHHHHHHHHHCCeEEEEeCCCCHH
Confidence 4456689999998664 567788887764433 32 23 899999999999999888776666789999998764
Q ss_pred hhhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCCC
Q 001586 290 DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYG 366 (1049)
Q Consensus 290 ~l~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~p~~~GaDivvgs~-k~lg~P~~~G 366 (1049)
++++ ++++|++|++++| |++|.+.|+++|+++||++|++++|+ +.++.+.+..|.++|+|++++|. |.+++| |
T Consensus 209 ~l~~ai~~~TklV~lesPsNPtG~i~Dl~~I~~lAk~~g~~lIVD-~A~a~~~~~~pl~~gaDivv~S~tK~l~G~---g 284 (464)
T PLN02509 209 EVAAAIGPQTKLVWLESPTNPRQQISDIRKIAEMAHAQGALVLVD-NSIMSPVLSRPLELGADIVMHSATKFIAGH---S 284 (464)
T ss_pred HHHHhCCcCCeEEEEECCCCCCCCHHHHHHHHHHHHHcCCEEEEE-CCccccccCChhhcCCcEEEecCcccccCC---C
Confidence 4555 7889999999998 79999999999999999999999994 45666666677889999999998 777643 3
Q ss_pred CCceEEEEEchhH-HhcCCCceeeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcchHHH
Q 001586 367 GPHAAFLATSQEY-KRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKT 445 (1049)
Q Consensus 367 GP~~G~l~~~~~l-~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irrekaTsni~t~~~l~a~~aa~y~~~~g~~Gl~~ 445 (1049)
+..+|+++++++. .+.+ ...++..++ .+....| |+...+-+-|..
T Consensus 285 dv~gG~v~~~~~~l~~~~-------------------------~~~~~~~g~-------~l~p~~A--~l~lr~L~tL~~ 330 (464)
T PLN02509 285 DVMAGVLAVKGEKLAKEV-------------------------YFLQNSEGS-------GLAPFDC--WLCLRGIKTMAL 330 (464)
T ss_pred ccceeEEEeccHHHHHHH-------------------------HHHHHhcCC-------CcCHHHH--HHHHhhhhhHHH
Confidence 3346888876543 2111 000111111 0111111 123333444555
Q ss_pred HHHHHHHHHHHHHHHhhcCCCeE
Q 001586 446 IAQRVHGLAGTFALGLKKLGTVE 468 (1049)
Q Consensus 446 ia~~~~~~a~~l~~~L~~~g~~~ 468 (1049)
+.++..+++.++++.|++...++
T Consensus 331 R~~r~~~nA~~la~~L~~~p~V~ 353 (464)
T PLN02509 331 RIEKQQENARKIAMYLSSHPRVK 353 (464)
T ss_pred HHHHHHHHHHHHHHHHhcCCCcc
Confidence 66677899999999999875453
No 304
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.61 E-value=1.7e-13 Score=159.22 Aligned_cols=212 Identities=19% Similarity=0.189 Sum_probs=153.5
Q ss_pred HHHHHHHHHHhCCCCcceEeccchHHHHHHHHHHhhhccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc---ch
Q 001586 214 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---KD 290 (1049)
Q Consensus 214 ~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a~~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~~---~~ 290 (1049)
.++++.+|++.|. .++.++.||++++.++++++ .. +||+|+++...|+.+...+.......|++++.++. ++
T Consensus 56 ~~Le~~lA~leg~--e~ivvt~gg~~Ai~~~l~al-l~--~Gd~Il~~~~~y~~~~~~~~~~~~~~gi~v~~vd~~d~e~ 130 (388)
T PRK08861 56 GLLEQTLSELESG--KGAVVTNCGTSALNLWVSAL-LG--PDDLIVAPHDCYGGTYRLFNTRANKGDFKVQFVDQSDAAA 130 (388)
T ss_pred HHHHHHHHHHhCC--CeEEEECCHHHHHHHHHHHH-cC--CCCEEEEcCCchHHHHHHHHHHHhcCCeEEEEECCCCHHH
Confidence 3456799999996 45889999998888877765 23 89999999999998888876666677899998875 44
Q ss_pred hhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCCCC
Q 001586 291 IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGG 367 (1049)
Q Consensus 291 l~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~p~~~GaDivvgs~-k~lg~P~~~GG 367 (1049)
+++ ++++|++|++++| |++|.+.|+++|+++||++|++++|+ +.++.+....|.++|||++++|+ |.+++|.+
T Consensus 131 l~~~i~~~tklV~lesP~NPtG~v~dl~~I~~la~~~gi~vIvD-ea~~~~~~~~pl~~GaDivv~S~tK~l~G~~d--- 206 (388)
T PRK08861 131 LDAALAKKPKLILLETPSNPLVRVVDIAELCQKAKAVGALVAVD-NTFLTPVLQKPLELGADFVIHSTTKYINGHSD--- 206 (388)
T ss_pred HHHhcCcCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEE-CCccccccCCCcccCCCEEEeecceeccCCCc---
Confidence 555 7789999999998 78999999999999999999999994 45566666778889999999999 76654321
Q ss_pred CceEEEEEch-hHHhcCCCceeeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcchHHHH
Q 001586 368 PHAAFLATSQ-EYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTI 446 (1049)
Q Consensus 368 P~~G~l~~~~-~l~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irrekaTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i 446 (1049)
--+|++.+++ ++.+++. ..|..-| .. .++. ..|+...|-+-|.-.
T Consensus 207 ~~gG~i~~~~~~~~~~~~-------------------------~~~~~~G--~~--~~p~-----~a~l~~rgl~Tl~lR 252 (388)
T PRK08861 207 VIGGVLITKTKEHAEELA-------------------------WWGNCIG--AT--GTPF-----DSYMTLRGIRTLGAR 252 (388)
T ss_pred ceeEEEEecHHHHHHHHH-------------------------HHHhccC--CC--CChH-----HHHHHHhcCCCHHHH
Confidence 1246666654 3322220 0111111 00 0111 123456666666667
Q ss_pred HHHHHHHHHHHHHHhhcCCCeE
Q 001586 447 AQRVHGLAGTFALGLKKLGTVE 468 (1049)
Q Consensus 447 a~~~~~~a~~l~~~L~~~g~~~ 468 (1049)
.+|..++|..+++.|++...++
T Consensus 253 ~~~~~~~a~~~a~~L~~~p~v~ 274 (388)
T PRK08861 253 MRVHEESAQQILAYLQTQSLVG 274 (388)
T ss_pred HHHHHHHHHHHHHHHHhCCCee
Confidence 7888899999999999875443
No 305
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.61 E-value=1.3e-13 Score=162.72 Aligned_cols=272 Identities=15% Similarity=0.139 Sum_probs=172.7
Q ss_pred HHHHHHHHhCCCCcceEeccchHHHHHHHHHHhhhccCCCCEEEEcCCCCHHHHHHHHH-hhcCCCeEEEEeCc------
Q 001586 216 FQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICIT-RADGFDIKVVVSDL------ 288 (1049)
Q Consensus 216 ~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a~~~~~~~g~~Vlv~~~~Hps~~~~l~~-~a~~~gi~v~~v~~------ 288 (1049)
.+..+++++|.+.+++.+ .+||.+.++++.++ .. +||+|+++...|+++...+.. .....|++++.++.
T Consensus 76 ~~~~la~~~g~~~~~i~~-~sgt~al~~~l~~l-~~--~gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 151 (416)
T PRK00011 76 AIDRAKELFGAEYANVQP-HSGSQANAAVYFAL-LK--PGDTILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGVDEETGL 151 (416)
T ss_pred HHHHHHHHhCCCceeeec-CCchHHHHHHHHHh-cC--CCCEEEEeccccCCccccccccccccceeeEeecCcCcccCC
Confidence 456899999998866544 46777776655554 33 899999999999875433211 12344667666554
Q ss_pred ---chhhc-cC-CCEeEEEEEcCCCCeeeccHHHHHHHHHhCCcEEEEEeccccccCC-----CCCCcccceEEEecC-c
Q 001586 289 ---KDIDY-KS-GDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTIL-----KPPGELGADIVVGSA-Q 357 (1049)
Q Consensus 289 ---~~l~~-l~-~~t~~V~v~~pn~~G~i~di~~I~~~ah~~galliV~a~~~alg~l-----~~p~~~GaDivvgs~-k 357 (1049)
+++++ +. .++++|++..+ .+|...|+++|+++||++|++++++. .++.|.. ..+-. ++|++++|. |
T Consensus 152 ~d~~~l~~~i~~~~~k~v~~~~~-~~~~~~~~~~I~~la~~~~~~livD~-a~~~g~~~~g~~~~~~~-~~di~~~S~~K 228 (416)
T PRK00011 152 IDYDEVEKLALEHKPKLIIAGAS-AYSRPIDFKRFREIADEVGAYLMVDM-AHIAGLVAAGVHPSPVP-HADVVTTTTHK 228 (416)
T ss_pred cCHHHHHHHHHhcCCCEEEECCC-cCCCccCHHHHHHHHHHcCCEEEEEC-cchhcccccCccCCCCC-CCcEEEecCCc
Confidence 34444 54 37888887654 45777899999999999999999942 2223322 22333 899999998 6
Q ss_pred cccccCCCCCCceEEEEEc-hhHHhcCCCceeeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHH
Q 001586 358 RFGVPMGYGGPHAAFLATS-QEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAV 436 (1049)
Q Consensus 358 ~lg~P~~~GGP~~G~l~~~-~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irrekaTsni~t~~~l~a~~aa~y~~ 436 (1049)
+|+ ||.+|++.++ +++.+++.... .+ + + .++.. .....++.++. .
T Consensus 229 ~l~------g~~gg~i~~~~~~~~~~l~~~~---------~~-~----------~---~~~~~---~~~~aa~~~a~--~ 274 (416)
T PRK00011 229 TLR------GPRGGLILTNDEELAKKINSAV---------FP-G----------I---QGGPL---MHVIAAKAVAF--K 274 (416)
T ss_pred CCC------CCCceEEEeCCHHHHHHHHHHh---------Cc-c----------c---cCCcc---HHHHHHHHHHH--H
Confidence 553 4556777775 56665441000 00 0 0 00111 11222222222 2
Q ss_pred HhCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEcC-CCCcceEEEecC----CHHHHHHHHHHcCCeeee----e-----
Q 001586 437 YHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQG-LPFFDTVKVKCA----DAHAIASAAYKIEMNLRV----V----- 502 (1049)
Q Consensus 437 ~~g~~Gl~~ia~~~~~~a~~l~~~L~~~g~~~v~~-~~~~~~v~i~~~----~~~~v~~~L~~~gI~~~~----~----- 502 (1049)
.+..++++++.++..++++++++.|++.| +++.. .....-+.+.++ ...++.+.|.++||.++. +
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~L~~~GI~v~~~~~p~~~~~~ 353 (416)
T PRK00011 275 EALEPEFKEYAQQVVKNAKALAEALAERG-FRVVSGGTDNHLVLVDLRSKGLTGKEAEAALEEANITVNKNAVPFDPRSP 353 (416)
T ss_pred HHHhhhHHHHHHHHHHHHHHHHHHHHhCC-CeeeecCCCCeEEEEeCcccCCCHHHHHHHHHHcCcEEccCcCCCCCCCC
Confidence 22345788899999999999999999987 88763 121233445543 256788899999998762 1
Q ss_pred -cCCeEEEEecc----CCCHHHHHHHHHHHhC
Q 001586 503 -DSNTVTASFDE----TTTLEDVDKLFIVFAG 529 (1049)
Q Consensus 503 -~~~~vris~~~----~~t~edid~lv~aL~~ 529 (1049)
.+..+|++.+. ..|++|+|+++++|+.
T Consensus 354 ~~~~~~Ri~~~~~~~~~~t~~di~~l~~~l~~ 385 (416)
T PRK00011 354 FVTSGIRIGTPAITTRGFKEAEMKEIAELIAD 385 (416)
T ss_pred CCCCceEecCHHHhhcCcCHHHHHHHHHHHHH
Confidence 13468987644 4569999999999963
No 306
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.61 E-value=3.1e-13 Score=160.75 Aligned_cols=296 Identities=14% Similarity=0.153 Sum_probs=187.4
Q ss_pred HHHHHHHHHhhCCC-----ccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEE-EcCCCCCccHHHHHhcC-------
Q 001586 635 NNLGEWLCTITGFD-----SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCG------- 701 (1049)
Q Consensus 635 ~el~~~la~l~G~~-----~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VL-ip~saHg~~pa~a~~~G------- 701 (1049)
.++.+.|++++..+ .+.+..+||+++++++++.+|.| . +|++|| +..+.||....+..+.|
T Consensus 109 ~~la~~L~~~~p~~~~~~~~v~f~~~SGSEAve~AlklAr~~---t---gr~~ii~~~~~yHG~t~~als~t~~~~~~~~ 182 (464)
T PRK06938 109 DQFVQDLFASLPEAFAREAKIQFCGPTGTDAVEAALKLVKTA---T---GRSTVLSFQGGYHGMSQGALSLMGNLGPKKP 182 (464)
T ss_pred HHHHHHHHHhCcccccccceEEEeCCCcHHHHHHHHHHHHHh---h---CCCeEEEECCccCCccHHHHhhcCCcccccc
Confidence 35667787776432 22344589999999999988876 2 355666 67889998766544321
Q ss_pred -----CEEEEEcCCCCCC------------CCHHHHHHHHHhcC---CCeEEEEEEcC-Cccccccc---cHHHHHHHHH
Q 001586 702 -----MKIVSVGTDAKGN------------INIEELRKAAEANR---DNLSTLMVTYP-STHGVYEE---GIDEICKIIH 757 (1049)
Q Consensus 702 -----~~Vv~V~~d~~g~------------iD~~~L~~~i~~~~---~~taaV~it~P-n~~G~i~~---di~eI~~lah 757 (1049)
-.+..+|.....+ .+++.+++.++++. +++++|+++.. ..-|++.+ .++++.++|+
T Consensus 183 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~ 262 (464)
T PRK06938 183 LGALLPGVQFLPYPYDYRCPFGLGGEAGVRANLHYLENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITE 262 (464)
T ss_pred CCCCCCCcEEeCCCccccccccCchhhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHH
Confidence 1244555432111 24778888887532 37899988754 34566642 5899999999
Q ss_pred HcCCEEEEeccccccccCcCCCCcc--------CCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCC
Q 001586 758 DNGGQVYMDGANMNAQVGLTSPGYI--------GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGG 829 (1049)
Q Consensus 758 ~~G~ll~vD~A~~~a~~gl~~Pg~~--------GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~ 829 (1049)
++|+++++|++ +.|+.+.|.+ -+|++++ .|.+ ++|-| +|.+..++++ ..+...
T Consensus 263 ~~giLlI~DEV----~tGfGRtG~~~a~e~~gv~PDiv~~--gKgl----ggG~P-lsAv~~~~~~-~~~~~~------- 323 (464)
T PRK06938 263 EAGIPLIVDEI----QSGFGRTGKMFAFEHAGIIPDVVVL--SKAI----GGSLP-LAVVVYREWL-DTWQPG------- 323 (464)
T ss_pred HcCCEEEEecc----ccCCCcCcHHHHHHhcCCCCCEEEe--eccc----cCCCc-eEEEeehhHh-hccCCC-------
Confidence 99999999987 5677677643 3699888 4765 44445 5666667664 322100
Q ss_pred CCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc---CCee--eccCCCceeeE
Q 001586 830 IPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHE 904 (1049)
Q Consensus 830 ~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~---~~v~--~~g~~g~~~~e 904 (1049)
...+++.|+++.++++.+.|..+.++++.+ ++..+.++|.++|+++ +.++ ..|. | .+..
T Consensus 324 -----------~~~~T~~gnpla~Aaa~a~L~~l~~~~l~~---~~~~~G~~l~~~L~~l~~~~~~i~~VrG~-G-lm~g 387 (464)
T PRK06938 324 -----------AHAGTFRGNQMAMAAGSATLRYIKEHRLAE---HAAAMGERLREHLRQLQRDYPQLGDVRGR-G-LMLG 387 (464)
T ss_pred -----------CCCCCCCcCHHHHHHHHHHHHHHHHhHHHH---HHHHHHHHHHHHHHHHHHhCCCeeeeecc-c-eEEE
Confidence 011224467788888899999887776544 4446677888888764 3322 1221 3 2222
Q ss_pred EEEeccCccc-----cC-C-CCHHHHHHHHHHCCcccCCCCCCCCCEEEEEccCCCCHHHHHHHHHHHHHHHHHH
Q 001586 905 FIVDLRGLKN-----TA-G-IEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEI 972 (1049)
Q Consensus 905 ~iv~~~~~~~-----~~-g-~~~~~v~k~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~eeid~fv~aL~~i~~~i 972 (1049)
+-+..+.-.. .. . .....+.+.+.++|+.+.... +..+++|+.|+...|++|||.+++++.+++.++
T Consensus 388 ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~g-~~~~~l~~~Ppl~it~~eid~~~~~l~~~l~~~ 461 (464)
T PRK06938 388 VEIVDPQGEPDALGHPPANGELASLIQRECLRRGLILELGG-RHGSVVRFLPPLIITAEQIDEVAEIFAEAVAAA 461 (464)
T ss_pred EEeccCcccccccccCCccHHHHHHHHHHHHHCCeEEeecC-CCCCEEEEECCCccCHHHHHHHHHHHHHHHHHH
Confidence 2221110000 00 0 013457778889999874321 124789999999999999999999999988663
No 307
>PRK07036 hypothetical protein; Provisional
Probab=99.61 E-value=4.2e-13 Score=159.83 Aligned_cols=308 Identities=16% Similarity=0.186 Sum_probs=192.7
Q ss_pred HHHHHHHHHHhhCCCc-cccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEE-EcCCCCCccHHHHHhcC----------
Q 001586 634 FNNLGEWLCTITGFDS-FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCG---------- 701 (1049)
Q Consensus 634 i~el~~~la~l~G~~~-~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VL-ip~saHg~~pa~a~~~G---------- 701 (1049)
..++.++|++++..+. ..++.+||+++++++++.+|.|...+|.++|.+|| ...+.||....+....|
T Consensus 97 ~~~lae~L~~~~p~~~~~v~f~~sGseAve~AlklAr~~~~~~g~t~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~~~~~~ 176 (466)
T PRK07036 97 AAELAAKLAELAPGDLNHVFLTTGGSTAVDSALRFVHYYFNVRGRPAKKHIITRGDAYHGSTYLTASLTGKAADRTEFDY 176 (466)
T ss_pred HHHHHHHHHHhCCCCcCEEEEeCCchHHHHHHHHHHHHHHHhcCCCCccEEEEEcCccCCccHhhhcccCCCcccccccC
Confidence 4578888888875322 24778999999999999999887666654566777 57889997654432211
Q ss_pred --CEEEEEcCCC-----CCC-------CCHHHHHHHHHh-cCCCeEEEEEEcC-Cccccccc---cHHHHHHHHHHcCCE
Q 001586 702 --MKIVSVGTDA-----KGN-------INIEELRKAAEA-NRDNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGGQ 762 (1049)
Q Consensus 702 --~~Vv~V~~d~-----~g~-------iD~~~L~~~i~~-~~~~taaV~it~P-n~~G~i~~---di~eI~~lah~~G~l 762 (1049)
..+..++... .+. ..++++++.+.+ +.+++++|+++.. +..|++.+ .+++|.++|++||++
T Consensus 177 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~l 256 (466)
T PRK07036 177 ASDLVHHLSSPNPYRRPAGMSEAAFCDFLVDEFEDKILSLGADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYDIL 256 (466)
T ss_pred CCCCcEEecCCcccccccCCChHHHHHHHHHHHHHHHHHcCCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCE
Confidence 1244444321 011 113556666653 3478999988865 34677653 399999999999999
Q ss_pred EEEeccccccccCcCCCCc-------c--CCcEEEeCCCcccccCCCCCC-CceeEEEEcccccccCCCC-ccccCCCCC
Q 001586 763 VYMDGANMNAQVGLTSPGY-------I--GADVCHLNLHKTFCIPHGGGG-PGMGPIGVKKHLAPFLPSH-PVVSTGGIP 831 (1049)
Q Consensus 763 l~vD~A~~~a~~gl~~Pg~-------~--GaDi~~~s~hK~f~~P~g~GG-Pg~G~i~~~~~l~~~lpg~-~vg~t~~~~ 831 (1049)
+|+|++ +.|+.+.|. + -+|++++ .|.++ +|- | +|.+++++++++.+... ..+.
T Consensus 257 lI~DEV----~tGfGRtG~~~~~~~~~gv~PDivt~--gK~l~----gG~~P-i~av~~~~~i~~~~~~~~~~~~----- 320 (466)
T PRK07036 257 YISDEV----VTGFGRLGHFFASEAVFGIQPDIITF--AKGLT----SGYQP-LGAVIISERLLDVISGPNAKGN----- 320 (466)
T ss_pred EEEeec----hhCCCcCchhhhhhhhcCCCCCEEEE--ccccc----cCccc-cEEEEEcHHHHHHHhcccCcCc-----
Confidence 999997 455555542 2 3688887 48763 331 5 56666787776544211 0000
Q ss_pred CCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc--CCee--eccCCCceeeEEEE
Q 001586 832 APEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPIL--FRGVNGTVAHEFIV 907 (1049)
Q Consensus 832 ~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~--~~v~--~~g~~g~~~~e~iv 907 (1049)
.. ...+++.|+++.++++.+.|..+.++++. ++..++.++|.++|+++ +.++ ..|. |. +..+-+
T Consensus 321 ------~~-~~~~T~~gnpl~~aaa~a~Le~i~~~~l~---~~~~~~g~~l~~~L~~l~~~~~v~~vrG~-Gl-~~~ve~ 388 (466)
T PRK07036 321 ------VF-THGFTYSGHPVACAAALKNIEIMEREGLC---EHVREVGPYFEERLASLRELPLVGDVRGD-HL-MACVEC 388 (466)
T ss_pred ------cc-ccCCCCCCCHHHHHHHHHHHHHHHhCCHH---HHHHHHHHHHHHHHHHhccCCCEEEEEee-ce-EEEEEE
Confidence 00 01112446778888888889888766654 44556778888888764 3322 1121 22 212222
Q ss_pred eccCc-cccCCC---CHHHHHHHHHHCCcccCCCCCCCCCEEEEEccCCCCHHHHHHHHHHHHHHHHHHH
Q 001586 908 DLRGL-KNTAGI---EPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIA 973 (1049)
Q Consensus 908 ~~~~~-~~~~g~---~~~~v~k~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~eeid~fv~aL~~i~~~i~ 973 (1049)
.-+.. +..... ....+.+.+.++|+.+... .+.++++|....|++|||.++++|.++++++.
T Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~----~~~~~l~Ppl~it~~~id~~~~~l~~al~~~~ 454 (466)
T PRK07036 389 VADKGSKALLPEDIAIGQRIDRHCQERGLLVRPL----EHLCVLSPPLIITRAQIDEIVAILRAAIEETA 454 (466)
T ss_pred ccCccccCCCCchhHHHHHHHHHHHHCCcEEeec----CCEEEEeCCCcCCHHHHHHHHHHHHHHHHHHH
Confidence 11100 000000 1346778888999987422 36799999999999999999999998887763
No 308
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.61 E-value=3.6e-14 Score=167.10 Aligned_cols=223 Identities=17% Similarity=0.158 Sum_probs=147.3
Q ss_pred HHHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHH----HHhcCCEEEEEcC
Q 001586 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGT 709 (1049)
Q Consensus 634 i~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~----a~~~G~~Vv~V~~ 709 (1049)
..++++.++++.|.+.+ +..+||+.|...++.++ . .++++||++...|+..... +...|++++++++
T Consensus 66 ~~~le~~lA~l~g~~~a-v~~sSGt~Al~~al~~l---l-----~~Gd~Vi~~~~~y~~t~~~~~~~l~~~Gi~v~~vd~ 136 (433)
T PRK08134 66 VAVLEERVAALEGGVGA-IATASGQAALHLAIATL---M-----GAGSHIVASSALYGGSHNLLHYTLRRFGIETTFVKP 136 (433)
T ss_pred HHHHHHHHHHHhCCCcE-EEeCCHHHHHHHHHHHH---h-----CCCCEEEEeCCccHHHHHHHHHHHhhCCeEEEEECC
Confidence 55888999999998764 66778877765444433 1 2568899988766543222 3448999999997
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-ccccccccHHHHHHHHHHcCCEEEEeccccccccCcCCCCccCCcEEE
Q 001586 710 DAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1049)
Q Consensus 710 d~~g~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~Pg~~GaDi~~ 788 (1049)
+ |+++|+++|+ ++|++|+++.|+ .+|.+. |+++|+++||++|++++||+++..+. +..|-++|+|+++
T Consensus 137 ~-----d~~~l~~~i~---~~TklV~~e~~~np~g~v~-Di~~I~~la~~~gi~livD~t~a~~~--~~~pl~~GaD~vv 205 (433)
T PRK08134 137 G-----DIDGWRAAIR---PNTRLLFGETLGNPGLEVL-DIPTVAAIAHEAGVPLLVDSTFTTPY--LLRPFEHGADLVY 205 (433)
T ss_pred C-----CHHHHHHhcC---CCCeEEEEECCCcccCccc-CHHHHHHHHHHcCCEEEEECCCcccc--cCCchhcCCCEEE
Confidence 4 8999999997 899999999995 588887 89999999999999999999865433 3567789999999
Q ss_pred eCCCcccccCCCCCCCc--eeEEEEc-cc-------ccccCCCCcccc-----CCCCCCC-----CCCCCCCCCCccchh
Q 001586 789 LNLHKTFCIPHGGGGPG--MGPIGVK-KH-------LAPFLPSHPVVS-----TGGIPAP-----EKSQPLGTIAAAPWG 848 (1049)
Q Consensus 789 ~s~hK~f~~P~g~GGPg--~G~i~~~-~~-------l~~~lpg~~vg~-----t~~~~~~-----~~~~~t~~i~sa~~g 848 (1049)
.|.||+++ |+| +|-+++. .. ..+.+.....+. +.+.... .+.....+ .|
T Consensus 206 ~S~tK~l~------g~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-----~G 274 (433)
T PRK08134 206 HSATKFLG------GHGTAIGGVLVDGGRFDWEASGKFPELTEPYAGFHGMVFAEESTVAAFLLRARREGLRD-----FG 274 (433)
T ss_pred eccccccC------CCCCceEEEEEecCccccccccccccccCCcccccccchhhccchhHHHHHHHHHHHHh-----cC
Confidence 99999984 555 3333332 11 111111111110 0000000 00000000 01
Q ss_pred hHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc
Q 001586 849 SALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH 889 (1049)
Q Consensus 849 ~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~ 889 (1049)
..+ ...-+++...|-+.+..+.++..++|..+++.|+++
T Consensus 275 ~~l--s~~~A~l~~~gL~tl~~R~~~~~~nA~~la~~L~~~ 313 (433)
T PRK08134 275 ACL--SPMNAWQLLQGIETLPLRMERHVANTRKVVAFLASH 313 (433)
T ss_pred CCC--CHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHhC
Confidence 011 112344556677778888899999999999999986
No 309
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.61 E-value=1e-13 Score=163.50 Aligned_cols=295 Identities=16% Similarity=0.126 Sum_probs=183.3
Q ss_pred HHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHH----HHHhcCCEEEEEcCC
Q 001586 635 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA----TAAMCGMKIVSVGTD 710 (1049)
Q Consensus 635 ~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa----~a~~~G~~Vv~V~~d 710 (1049)
.++++.++++.|.+. .+..++|.+|+.+++.++. +++++||++...|+.... .+...|++++.++.
T Consensus 66 ~~le~~lA~l~g~~~-al~~~SG~~Ai~~al~all--------~pGd~VIv~~~~y~~t~~~~~~~~~~~G~~v~~vd~- 135 (427)
T PRK05994 66 AVLEERVAALEGGTA-ALAVASGHAAQFLVFHTLL--------QPGDEFIAARKLYGGSINQFGHAFKSFGWQVRWADA- 135 (427)
T ss_pred HHHHHHHHHHhCCCc-EEEEcCHHHHHHHHHHHHh--------CCCCEEEEecCcchhHHHHHHHHHHhcCcEEEEECC-
Confidence 478899999999876 4667888887765554432 256889988776664433 25568999999986
Q ss_pred CCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CccccccccHHHHHHHHHHcCCEEEEeccccccccCcCCCCccCCcEEEe
Q 001586 711 AKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHL 789 (1049)
Q Consensus 711 ~~g~iD~~~L~~~i~~~~~~taaV~it~P-n~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~Pg~~GaDi~~~ 789 (1049)
.|+++++++++ ++|++|++++| |.+|.+. |+++|+++||++|+++++|+++..+ -...|-++|+|+++.
T Consensus 136 ----~d~~~l~~ai~---~~tklV~vesp~NptG~v~-dl~~I~~la~~~gi~livD~a~a~~--~~~~pl~~gaDivv~ 205 (427)
T PRK05994 136 ----DDPASFERAIT---PRTKAIFIESIANPGGTVT-DIAAIAEVAHRAGLPLIVDNTLASP--YLIRPIEHGADIVVH 205 (427)
T ss_pred ----CCHHHHHHhcC---cCCeEEEEECCCCCCCeec-CHHHHHHHHHHcCCEEEEECCcccc--ccCCccccCCcEEEE
Confidence 38999999997 78999999999 4689887 7999999999999999999987533 235677899999999
Q ss_pred CCCcccccCCCCCCCceeEEEEcccccccCCCCc--cccCCCCC--------CCC----------C-CCCCCCCCccchh
Q 001586 790 NLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHP--VVSTGGIP--------APE----------K-SQPLGTIAAAPWG 848 (1049)
Q Consensus 790 s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~--vg~t~~~~--------~~~----------~-~~~t~~i~sa~~g 848 (1049)
|+||+++.+ |++-.|+++..... .+.+... ...+.+.+ ..+ + ....+...+ +
T Consensus 206 S~tK~lgg~---~~~~gG~v~~~~~~-~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~-~-- 278 (427)
T PRK05994 206 SLTKFLGGH---GNSMGGIIVDGGTF-DWSKSGKYPMLSEPRPEYHGLVLHETFGNFAFAIAARVLGLRDLGPAIS-P-- 278 (427)
T ss_pred cCccccCCC---CCcEEEEEEeCCcc-ccccccccccccCCcchhhhhhHHHHhhhhhhHHHHHHHHHHhcCCCCC-H--
Confidence 999998522 33444555432211 1111000 00000000 000 0 000111110 0
Q ss_pred hHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhccCC---eeeccCCCceeeEEEEeccCccccCCCCHHHHHH
Q 001586 849 SALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYP---ILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAK 925 (1049)
Q Consensus 849 ~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~~~---v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k 925 (1049)
--+++..-|-+-|..+.++..++|.++++.|+++.. |.|++. + ..+..++++
T Consensus 279 -------~~A~l~~~~l~tL~~r~~~~~~~a~~la~~L~~~p~v~~v~yP~l------------~------~~~~~~~~~ 333 (427)
T PRK05994 279 -------FNAFLILTGIETLPLRMQRHSDNALAVAEWLKGHPKVSWVNYAGL------------P------DDPYHALAQ 333 (427)
T ss_pred -------HHHHHHHcCcccHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCC------------C------CCccHHHHH
Confidence 124456666777888888999999999999998633 334321 0 123456666
Q ss_pred HHHHCCcccCCCCCCCCCEEEEEccCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCccccccchh
Q 001586 926 RLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKVTCLFLHHGYF 999 (1049)
Q Consensus 926 ~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~eeid~fv~aL~~i~~~i~~i~~g~~~~~~~~l~~~ph~~~~~~~ 999 (1049)
+....|+ ++.+-|.+ ..+.++.++|++.|+-+ ....+ -++.+.|-..|.++.++++
T Consensus 334 ~~~~~g~---------g~~~sf~l--~~~~~~~~~~~~~l~l~-~~~~s------~G~~~sl~~~p~~~~h~~~ 389 (427)
T PRK05994 334 KYSPKGA---------GAVFTFGL--KGGYEAGVKLVSSLKLF-SHLAN------IGDTRSLVIHPASTTHRQL 389 (427)
T ss_pred HhcCCCc---------eEEEEEEe--cCCHHHHHHHHHhCCcc-eeccc------cCCCcceeeCCCCCCcccC
Confidence 6433331 13333333 33577788888888632 11112 2245666666666665443
No 310
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.61 E-value=6.7e-14 Score=169.98 Aligned_cols=272 Identities=14% Similarity=0.110 Sum_probs=189.7
Q ss_pred HHHHHHHHHHHHHhCCCCcceEeccchHHHHHHHHHHhhhccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc--
Q 001586 211 ESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL-- 288 (1049)
Q Consensus 211 e~l~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a~~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~~-- 288 (1049)
..+.++|+.+|+++|++.+.+ +++|+|++..++++|.. . +||+||+++++|.|+...+.. .|++.+++.+
T Consensus 195 G~i~eAe~~aA~~fgAd~tyf-vvNGTS~~n~av~~a~~-~--~Gd~VLvdRN~HKSv~~aLil----sga~PVYl~P~~ 266 (713)
T PRK15399 195 GPHLEAEEYIARTFGAEQSYI-VTNGTSTSNKIVGMYAA-P--AGSTLLIDRNCHKSLAHLLMM----SDVVPIWLKPTR 266 (713)
T ss_pred hHHHHHHHHHHHHhCCCcEEE-EeCChHHHHHHHHHHhc-C--CCCEEEeecccHHHHHHHHHH----cCCeeEEecccc
Confidence 468899999999999997655 67888888888888753 3 899999999999999987642 5888888654
Q ss_pred ----------------chhhc-c--CCCE---eEEEEEcCCCCeeeccHHHHHHHHHhCCcEE-EEE----eccccccCC
Q 001586 289 ----------------KDIDY-K--SGDV---CGVLVQYPGTEGEVLDYGDFIKNAHANGVKV-VMA----TDLLALTIL 341 (1049)
Q Consensus 289 ----------------~~l~~-l--~~~t---~~V~v~~pn~~G~i~di~~I~~~ah~~gall-iV~----a~~~alg~l 341 (1049)
+.+++ + .++. +++++|+||++|.+.|+++|++++ |+.+ +|+ ++..-...+
T Consensus 267 n~~Gi~g~I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~pTYdGi~yd~~~I~~~~---g~~~ilvDEAhgah~~F~p~~ 343 (713)
T PRK15399 267 NALGILGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNSTYDGLLYNTDWIKQTL---DVPSIHFDSAWVPYTHFHPIY 343 (713)
T ss_pred cccCCcCCCChhhccHHHHHHHHHhCCCcCCceEEEEECCCCCceeeCHHHHHHHh---CCCEEEEeccchhhhhcCccc
Confidence 22332 2 2333 689999999999999999999999 6666 473 221111212
Q ss_pred C--CCCcc--cceEE---EecC-ccccccCCCCCCceEEEEEchhHHhcCCCceeeeeecCCCCcceeeecccccccccc
Q 001586 342 K--PPGEL--GADIV---VGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRR 413 (1049)
Q Consensus 342 ~--~p~~~--GaDiv---vgs~-k~lg~P~~~GGP~~G~l~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irr 413 (1049)
+ .+-.. |+|.+ +.|. |.++. +. +++++.++.. + | |-|.
T Consensus 344 ~~~sam~~~~~aD~~i~~tQStHKtL~a-lT----QaS~iHvk~~----v---------d----------------~~~~ 389 (713)
T PRK15399 344 QGKSGMSGERVPGKVIFETQSTHKMLAA-FS----QASLIHIKGE----Y---------D----------------EETF 389 (713)
T ss_pred CCcChhhCCCCCCeeeeeeeehhccccc-cc----hheeeeecCC----C---------C----------------HHHH
Confidence 2 11112 68888 8888 55543 22 5677776432 1 1 0011
Q ss_pred cccCCCccchhHHHHHHHHHH--HHHhC-cchHHHHHHHHHHHHHHHHHHhhcCCC------eEEcCC------------
Q 001586 414 DKATSNICTAQALLANMAAMY--AVYHG-PEGLKTIAQRVHGLAGTFALGLKKLGT------VEVQGL------------ 472 (1049)
Q Consensus 414 ekaTsni~t~~~l~a~~aa~y--~~~~g-~~Gl~~ia~~~~~~a~~l~~~L~~~g~------~~v~~~------------ 472 (1049)
..+-.-..|+++.|.++|++- ..++. +.| +++.++..+.+..+++.|.++.+ ++++++
T Consensus 390 n~a~~m~~STSPsY~LmASLD~a~~~m~~~~G-~~l~~~~i~~a~~fR~~l~~~~~~~~~w~f~~~~~~~~~~~~~w~l~ 468 (713)
T PRK15399 390 NEAFMMHTSTSPSYPIVASVETAAAMLRGNPG-KRLINRSVERALHFRKEVQRLREESDGWFFDIWQPENVDEAECWPVA 468 (713)
T ss_pred HHHHHHHcCCCcHHHHHHHHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHHHhccccccCceeeecCccccCCccceecC
Confidence 112122335688999999983 22332 344 56778888889999999987654 455431
Q ss_pred ---C------------Ccce--EEEecC-----------C--HHHHHHHHHHcCCeeeeecCCeEEEEeccCCCHHHHHH
Q 001586 473 ---P------------FFDT--VKVKCA-----------D--AHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDK 522 (1049)
Q Consensus 473 ---~------------~~~~--v~i~~~-----------~--~~~v~~~L~~~gI~~~~~~~~~vris~~~~~t~edid~ 522 (1049)
. ..|+ ++|.++ + +..+.+.|.++||.+...+...+.+.++..+|++++++
T Consensus 469 p~~~whgf~~~~~~~~~lDP~KltI~t~g~~~~g~~~~~Gi~g~~l~~~L~e~gI~~E~~d~~~vL~l~s~g~t~~~~~~ 548 (713)
T PRK15399 469 PGEQWHGFKDADADHMFLDPVKVTILTPGMDEQGNMSEEGIPAALVAKFLDERGIVVEKTGPYNLLFLFSIGIDKTKAMG 548 (713)
T ss_pred CCcccccccccccccccCCCceEEEEecCcccccccccCCCCHHHHHHHHHHcCCEEEecCCCeEEEEeCCCCCHHHHHH
Confidence 0 2244 555443 3 67899999999999999888999999999999999999
Q ss_pred HHHHHh
Q 001586 523 LFIVFA 528 (1049)
Q Consensus 523 lv~aL~ 528 (1049)
|+++|.
T Consensus 549 L~~aL~ 554 (713)
T PRK15399 549 LLRGLT 554 (713)
T ss_pred HHHHHH
Confidence 999996
No 311
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=99.61 E-value=4e-14 Score=163.16 Aligned_cols=281 Identities=17% Similarity=0.168 Sum_probs=176.1
Q ss_pred HHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCEEEEEcCCCCCC
Q 001586 635 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGN 714 (1049)
Q Consensus 635 ~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~Vv~V~~d~~g~ 714 (1049)
.++++++++.+|.+..++..++|++. +..++++.+.+ .++++|+++...++.+...++..|++++.++.++++.
T Consensus 60 ~~l~~~~a~~~g~~~~~I~~~~Gs~e--~i~~~~~~~~~----~g~~~vli~~P~y~~y~~~~~~~G~~~~~v~~~~~~~ 133 (351)
T PRK01688 60 KAVIENYAAYAGVKPEQVLVSRGADE--GIELLIRAFCE----PGKDAILYCPPTYGMYSVSAETIGVEIRTVPTLDNWQ 133 (351)
T ss_pred HHHHHHHHHHhCCCHHHEEEcCCHHH--HHHHHHHHhcC----CCCCEEEEcCCCHHHHHHHHHHcCCEEEEeecCCCCC
Confidence 36788899999998876666666542 33344444321 1237899887766666666889999999999987889
Q ss_pred CCHHHHHHHHHhcCCCeEEEEEEcCC-ccccccccHHHHHHHHHH--cCCEEEEeccccccccCcCCCC---ccCCc-EE
Q 001586 715 INIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHD--NGGQVYMDGANMNAQVGLTSPG---YIGAD-VC 787 (1049)
Q Consensus 715 iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~~di~eI~~lah~--~G~ll~vD~A~~~a~~gl~~Pg---~~GaD-i~ 787 (1049)
+|++++++++ +++++|++++|| .+|.+- +.+++.++++. .++++++|+++.. +....... ..... ++
T Consensus 134 ~d~~~l~~~~----~~~~lv~l~nPnNPTG~~~-~~~~l~~l~~~~~~~~~vivDEay~~-f~~~~s~~~~~~~~~n~iv 207 (351)
T PRK01688 134 LDLPAIADNL----DGVKVVYVCSPNNPTGNLI-NPQDLRTLLELTRGKAIVVADEAYIE-FCPQASLAGWLAEYPHLVI 207 (351)
T ss_pred CCHHHHHHhc----cCCcEEEEeCCCCCCCCCC-CHHHHHHHHHhCCCCcEEEEECchhh-cCCCCChHHHHhhCCCEEE
Confidence 9999999887 478899999995 599886 45665555543 2689999998631 11111110 11123 55
Q ss_pred EeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhh
Q 001586 788 HLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (1049)
Q Consensus 788 ~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eG 867 (1049)
..+++|+|++ .|-++|++++++++.+.+... + ...++++ ....++.++|...+.+-
T Consensus 208 ~rSfSK~~gl----aGlRiGy~i~~~~~i~~l~~~------------~--~~~~v~~------~~~~~a~~~L~~~~~~~ 263 (351)
T PRK01688 208 LRTLSKAFAL----AGLRCGFTLANEEVINLLLKV------------I--APYPLST------PVADIAAQALSPQGIAA 263 (351)
T ss_pred EecchHhhcC----HHHHHhHHhCCHHHHHHHHhc------------c--CCCCCCH------HHHHHHHHHHhcchHHH
Confidence 6677787743 366789999887766543210 0 0011221 11112223332211223
Q ss_pred HHHHHHHHHHHHHHHHHHHhcc--CCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHHHCCcccCCCC-C-CCCC
Q 001586 868 LTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMS-W-PVPG 943 (1049)
Q Consensus 868 l~~~~~~~~~~a~yL~~~L~~~--~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~-~-p~~~ 943 (1049)
+++..+...++.+++.+.|+++ +...++. + .+-+.+++. +..++.++|.++||.+.... + ...+
T Consensus 264 ~~~~~~~~~~~r~~l~~~L~~~~~~~~~~ps--~--~nfi~~~~~--------~~~~l~~~L~~~gi~vr~~~~~~~~~~ 331 (351)
T PRK01688 264 MRERVAEINANRQWLIAALKEIPCVEQVFDS--E--TNYILARFT--------ASSAVFKSLWDQGIILRDQNKQPGLSN 331 (351)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCeECCC--C--CcEEEEEcC--------CHHHHHHHHHHCCeEEEECCCcCCCCC
Confidence 4444555566778899999875 2222321 1 222445542 46789999999999886432 3 2468
Q ss_pred EEEEEccCCCCHHHHHHHHHHHH
Q 001586 944 TLMIEPTESESKEELDRYCDALI 966 (1049)
Q Consensus 944 ~lri~~t~~~t~eeid~fv~aL~ 966 (1049)
++||++. +.+|+++|+++|+
T Consensus 332 ~iRis~~---~~~e~~~l~~al~ 351 (351)
T PRK01688 332 CLRITIG---TREECQRVIDALR 351 (351)
T ss_pred eEEEeCC---CHHHHHHHHHhhC
Confidence 9999986 6899999999873
No 312
>PRK05942 aspartate aminotransferase; Provisional
Probab=99.61 E-value=1e-13 Score=162.39 Aligned_cols=296 Identities=17% Similarity=0.173 Sum_probs=178.2
Q ss_pred hhcHHHHHHHHHHHHHHhhCCC--cc-ccccCch-HHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCC
Q 001586 627 AQGYQEMFNNLGEWLCTITGFD--SF-SLQPNAG-AAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGM 702 (1049)
Q Consensus 627 ~~G~~~~i~el~~~la~l~G~~--~~-~l~~~sG-a~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~ 702 (1049)
.+|..++.+.+.+++....|.+ .. .+..++| .+|.+ .+++.+. .++++|+++...+..+...+...|+
T Consensus 72 ~~G~~~lr~aia~~~~~~~~~~~~~~~~i~vt~G~~~al~---~~~~~~~-----~~gd~Vlv~~P~y~~~~~~~~~~g~ 143 (394)
T PRK05942 72 FEGTASFRQAITDWYHRRYGVELDPDSEALPLLGSKEGLT---HLALAYV-----NPGDVVLVPSPAYPAHFRGPLIAGA 143 (394)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCcCCCCeEEEccChHHHHH---HHHHHhC-----CCCCEEEEcCCCCcchHHHHHHcCC
Confidence 3566666666777776666753 33 2444444 44443 2333331 2568899998877666666788999
Q ss_pred EEEEEcCCCC--CCCCHHHHHHHHHhcCCCeEEEEEEcCC-cccccc--ccHHHHHHHHHHcCCEEEEeccccccc-cCc
Q 001586 703 KIVSVGTDAK--GNINIEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQ-VGL 776 (1049)
Q Consensus 703 ~Vv~V~~d~~--g~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~--~di~eI~~lah~~G~ll~vD~A~~~a~-~gl 776 (1049)
+++.++++.+ +.+|+++|+++++ +++++|++++|+ .+|.+- +++++|.++|+++|+++++|+++..-. .+.
T Consensus 144 ~~~~v~~~~~~~~~~d~~~l~~~~~---~~~k~i~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~ 220 (394)
T PRK05942 144 QIYPIILKPENDWLIDLSSIPEEVA---QQAKILYFNYPSNPTTATAPREFFEEIVAFARKYEIMLVHDLCYAELAFDGY 220 (394)
T ss_pred EEEEeecCCccCCccCHHHHHHhcc---ccceEEEEcCCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEeccchhhccCCC
Confidence 9999998754 4699999999986 789999999994 699875 248999999999999999999853111 111
Q ss_pred CC------CCccCCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhH
Q 001586 777 TS------PGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSA 850 (1049)
Q Consensus 777 ~~------Pg~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~ 850 (1049)
.. ++..+..+++.++.|.|++ .|-++|++++++++...+... +.....++++ ..+
T Consensus 221 ~~~~~~~~~~~~~~~i~~~SfSK~~~~----~GlRiG~i~~~~~l~~~l~~~------------~~~~~~~~~~--~~q- 281 (394)
T PRK05942 221 QPTSLLEIPGAKDIGVEFHTLSKTYNM----AGWRVGFVVGNRHIIQGLRTL------------KTNLDYGIFS--ALQ- 281 (394)
T ss_pred CCCChhhCCCccccEEEEecchhccCC----hhhheeeeecCHHHHHHHHHH------------HhhcccCCCH--HHH-
Confidence 00 1111234667778888743 366799999887766543210 0000011111 011
Q ss_pred HHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHH-HHH
Q 001586 851 LILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKR-LMD 929 (1049)
Q Consensus 851 ~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~-L~~ 929 (1049)
.++..++. ...+.+++..++..++.+++.+.|++. .+.+..+.+.++ +.++++. +.+..+++.+ |.+
T Consensus 282 ---~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~~~~~~f--~~~~~~~-----~~~~~~~~~~~l~~ 349 (394)
T PRK05942 282 ---KAAETALQ-LPDSYLQQVQERYRTRRDFLIQGLGEL-GWNIPPTKATMY--LWVPCPV-----GMGSTDFALNVLQK 349 (394)
T ss_pred ---HHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHHHHC-CCeecCCCeeeE--EEEECCC-----CCCHHHHHHHHHHH
Confidence 11222232 223445555566666778888888764 222212222222 3456541 3456677765 457
Q ss_pred CCcccC-CCCCC--CCCEEEEEccCCCCHHHHHHHHHHHHHHH
Q 001586 930 YGFHGP-TMSWP--VPGTLMIEPTESESKEELDRYCDALISIR 969 (1049)
Q Consensus 930 ~Gi~~~-~~~~p--~~~~lri~~t~~~t~eeid~fv~aL~~i~ 969 (1049)
+||.+. .-.|. ..+++|+++.. +.++|.++|+.+.
T Consensus 350 ~gV~v~~g~~f~~~~~~~iRis~~~-----~~~~l~~~l~~l~ 387 (394)
T PRK05942 350 TGVVVTPGNAFGEGGEGYVRISLIA-----DCDRLGEALDRLK 387 (394)
T ss_pred CCEEEeCChhhCcCCCCeEEEEecC-----CHHHHHHHHHHHH
Confidence 899863 32332 24799999952 3566777766553
No 313
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.61 E-value=1.7e-13 Score=161.48 Aligned_cols=145 Identities=22% Similarity=0.253 Sum_probs=116.4
Q ss_pred HHHHHHHHHHHhCCCCcceEeccchHHHHHHHHHHhhhccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeC-c---
Q 001586 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSD-L--- 288 (1049)
Q Consensus 213 l~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a~~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~-~--- 288 (1049)
..++++.+|++.|.+ .+..+.+|++++.++++++ . ++||+||++..+|+++...+...++..|++++++| .
T Consensus 71 ~~~le~~la~l~g~~--~~v~fsSG~~Ai~~al~~l-l--~~Gd~VI~~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~~d~ 145 (437)
T PRK05613 71 VEALENRIASLEGGV--HAVAFASGQAAETAAILNL-A--GAGDHIVTSPRLYGGTETLFLVTLNRLGIEVTFVENPDDP 145 (437)
T ss_pred HHHHHHHHHHHhCCC--eEEEeCCHHHHHHHHHHHh-c--CCCCEEEECCCccHHHHHHHHHHHHhcCeEEEEECCCCCH
Confidence 456778999999985 4667778888877766654 2 38999999999999997766666677899999996 3
Q ss_pred chhhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecCccccccC
Q 001586 289 KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSAQRFGVPM 363 (1049)
Q Consensus 289 ~~l~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~p~~~GaDivvgs~k~lg~P~ 363 (1049)
+++++ ++++|++|++.++ |++|.+.|+++|+++||++|++++|++ .++.+.+..|.++|||++++|++|+.+|+
T Consensus 146 e~l~~~l~~~tk~V~~e~~~Np~~~v~di~~I~~la~~~gi~livD~-t~a~g~~~~p~~~GaDivv~S~~K~l~G~ 221 (437)
T PRK05613 146 ESWQAAVQPNTKAFFGETFANPQADVLDIPAVAEVAHRNQVPLIVDN-TIATAALVRPLELGADVVVASLTKFYTGN 221 (437)
T ss_pred HHHHHhCCccCeEEEEECCCCCCCcccCHHHHHHHHHHcCCeEEEEC-CCccccccChHHhCCCEEEeeccceecCC
Confidence 34555 7889999988765 889999999999999999999999953 45667667788999999999995554443
No 314
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.61 E-value=5.9e-14 Score=165.39 Aligned_cols=293 Identities=17% Similarity=0.159 Sum_probs=179.1
Q ss_pred HHHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCc-cH---HHHHhcCCEEEEEcC
Q 001586 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGT-NP---ATAAMCGMKIVSVGT 709 (1049)
Q Consensus 634 i~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~-~p---a~a~~~G~~Vv~V~~ 709 (1049)
..++++.++++.|.+. .+..++|..|..+++.++. .++++||++...|+. +. ..+...|++++.++.
T Consensus 66 ~~~Le~~lA~leg~~~-al~~~sG~~Ai~~al~~ll--------~~GD~Vlv~~~~y~~t~~~~~~~~~~~Gv~v~~vd~ 136 (431)
T PRK08248 66 TDVFEKRIAALEGGIG-ALAVSSGQAAITYSILNIA--------SAGDEIVSSSSLYGGTYNLFAHTLPKLGITVKFVDP 136 (431)
T ss_pred HHHHHHHHHHHhCCCc-EEEECCHHHHHHHHHHHHh--------CCCCEEEEccCchhhHHHHHHHHHHhCCEEEEEECC
Confidence 3468899999999765 4667788776655544431 256889998876653 22 225668999999987
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CccccccccHHHHHHHHHHcCCEEEEeccccccccCcCCCCccCCcEEE
Q 001586 710 DAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1049)
Q Consensus 710 d~~g~iD~~~L~~~i~~~~~~taaV~it~P-n~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~Pg~~GaDi~~ 788 (1049)
.|+++++++++ +++++|++++| |.+|.+. |+++|+++||++|+++++|+++.. +....|.++|+|+++
T Consensus 137 -----~d~e~l~~ai~---~~tklV~l~sp~NPtG~v~-di~~I~~la~~~gi~vIvD~t~a~--~~~~~pl~~gaDivv 205 (431)
T PRK08248 137 -----SDPENFEAAIT---DKTKALFAETIGNPKGDVL-DIEAVAAIAHEHGIPLIVDNTFAS--PYLLRPIEHGADIVV 205 (431)
T ss_pred -----CCHHHHHHhcC---CCCeEEEEECCCCCCCccc-CHHHHHHHHHHcCCEEEEeCCCCc--cccCChhHcCCCEEE
Confidence 48999999997 78999999999 5689998 899999999999999999998542 224567789999999
Q ss_pred eCCCcccccCCCCCCCc--eeEEEE-cccccccCCCCcccc-CCCCCC--------CCC-----------CCCCCCCCcc
Q 001586 789 LNLHKTFCIPHGGGGPG--MGPIGV-KKHLAPFLPSHPVVS-TGGIPA--------PEK-----------SQPLGTIAAA 845 (1049)
Q Consensus 789 ~s~hK~f~~P~g~GGPg--~G~i~~-~~~l~~~lpg~~vg~-t~~~~~--------~~~-----------~~~t~~i~sa 845 (1049)
.|+||+++ ||| +|.+++ +.+....-.+..... +.+... .++ ....+...
T Consensus 206 ~S~tK~lg------g~g~~~Gg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l-- 277 (431)
T PRK08248 206 HSATKFIG------GHGTSIGGVIVDSGKFDWKGSGKFPGLTEPDPSYHGLVYTDAVGEAAYITKARVQLLRDLGAAL-- 277 (431)
T ss_pred EcCccccC------CCCCceEEEEEeCCccccccccccccccCCccccccchhhhhhchhhHHHHHHHHHHHhcCCCC--
Confidence 99999984 444 444444 433211000110000 000000 000 00011111
Q ss_pred chhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhccCC---eeeccCCCceeeEEEEeccCccccCCCCHHH
Q 001586 846 PWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYP---ILFRGVNGTVAHEFIVDLRGLKNTAGIEPED 922 (1049)
Q Consensus 846 ~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~~~---v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~ 922 (1049)
..--+|+...|-+-|..+.++..++|..+++.|+++.. |.|++.. ..+..+
T Consensus 278 --------~p~~a~l~~rgl~tl~~R~~~~~~nA~~la~~L~~~p~v~~V~yPgl~------------------s~p~~~ 331 (431)
T PRK08248 278 --------SPFNSFLLLQGLETLHLRMERHSENALAVAKFLEEHEAVEWVSYPGLP------------------SHPSYE 331 (431)
T ss_pred --------CHHHHHHHhcCcCcHHHHHHHHHHHHHHHHHHHHhCCCcceEECCCCC------------------CCccHH
Confidence 11134456666677778888999999999999998732 3443310 112345
Q ss_pred HHHHHHHCCcccCCCCCCCCCEEEEEccCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCccccccch
Q 001586 923 VAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKVTCLFLHHGY 998 (1049)
Q Consensus 923 v~k~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~eeid~fv~aL~~i~~~i~~i~~g~~~~~~~~l~~~ph~~~~~~ 998 (1049)
++++....|+ ++ ++++....+.++..+|++.|+-+. ...++ | +.+.|-..|.++.++.
T Consensus 332 ~~~~~~~~g~---------gg--~~sf~l~~~~~~~~~f~~~l~l~~-~~~sl--G----~~~sl~~~p~~~~h~~ 389 (431)
T PRK08248 332 LAKKYLPKGQ---------GA--ILTFGIKGGVEAGKKLIDSVKLFS-HLANV--G----DSKSLIIHPASTTHQQ 389 (431)
T ss_pred HHHHhCcCCC---------ce--EEEEEecCCHHHHHHHHHhCCcce-ecccc--C----CCCeeeeCCCcCcccc
Confidence 6665432221 13 333333335677778888776321 11121 2 4555666665555443
No 315
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.60 E-value=2.1e-14 Score=156.97 Aligned_cols=313 Identities=15% Similarity=0.168 Sum_probs=205.3
Q ss_pred ccccCCCCCCCCCcHHHHHHHHhCCccccccCCChhhHhhhHHHHHHHHHHHHHHHhCCCCcceEeccchHHHHHHHHHH
Q 001586 168 KSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMC 247 (1049)
Q Consensus 168 ~~~lG~g~y~~~~p~~i~~~~~~~~~~~t~ytpyq~e~sqg~le~l~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a 247 (1049)
++|+|++-+|.+.-+.-+ -+++.+- +...-+-..|.-+-..+++..+|+|-+-|. +.++.+.--+..+.+..
T Consensus 179 NDYLgms~Hp~V~~A~~~--tl~~hG~----GAGGTRNIsG~s~~hv~LE~eLA~LHqK~a--ALlFsSCfVANDstLft 250 (570)
T KOG1360|consen 179 NDYLGMSRHPEVLDAMHD--TLDRHGA----GAGGTRNISGHSKHHVRLEAELADLHQKEA--ALLFSSCFVANDSTLFT 250 (570)
T ss_pred CccccccCChHHHHHHHH--HHHHcCC----CcCCccccCCCCchhhhHHHHHHHHhcCcc--eeeeeeeeeccchHHHH
Confidence 579999987654444332 3333222 112223345666777888899999999887 33444433333333322
Q ss_pred hhhccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCcchhhc-c---CC-CEeEEEEEcC-CCCeeeccHHHHHHH
Q 001586 248 NNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKDIDY-K---SG-DVCGVLVQYP-GTEGEVLDYGDFIKN 321 (1049)
Q Consensus 248 ~~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~~~~l~~-l---~~-~t~~V~v~~p-n~~G~i~di~~I~~~ 321 (1049)
+. .+-++-+|+.+..+|.|.+..++. +.--.+-+++.|+++|++ + ++ -.+.|.++.. ++.|.|.|+++|+++
T Consensus 251 La-k~lpgcei~SD~gNHASMI~GIrn-s~v~K~IFrHND~~hL~~lL~~~~~svPKivAFEtVhSM~GavcpleelcDv 328 (570)
T KOG1360|consen 251 LA-KKLPGCEIFSDEGNHASMIQGIRN-SRVPKHIFRHNDLDHLEQLLQSSPKSVPKIVAFETVHSMDGAVCPLEELCDV 328 (570)
T ss_pred HH-HHCCCcEEeccccchHHHHHHhhh-cCCcceeeccCCHHHHHHHHHhCCCCCCceEEEeeeeccCCCcCCHHHHHHH
Confidence 11 112788999999999999999976 333456677788888876 3 33 3567777765 899999999999999
Q ss_pred HHhCCcEEEEEeccccccCCCCCCc---------ccceEEEecC-ccccccCCCCCCceEEEEEchhHHhcCCCceeeee
Q 001586 322 AHANGVKVVMATDLLALTILKPPGE---------LGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVS 391 (1049)
Q Consensus 322 ah~~galliV~a~~~alg~l~~p~~---------~GaDivvgs~-k~lg~P~~~GGP~~G~l~~~~~l~~~lpgrivG~s 391 (1049)
+|++|++..++ +.++.|+..+-|+ --.||+.|+. |.||. .| |+++.+.++++.+...-
T Consensus 329 ah~yGAiTFlD-EVHAVGlYG~rGaGvgerdGvm~kvDiIsGTLgKafGc---VG----GYIAat~~LvDmiRSyA---- 396 (570)
T KOG1360|consen 329 AHKYGAITFLD-EVHAVGLYGPRGAGVGERDGVMHKVDIISGTLGKAFGC---VG----GYIAATRKLVDMIRSYA---- 396 (570)
T ss_pred HHHhCceeeee-hhhhhccccCCCCCccccCCcchhhhhcccchhhhccc---cc----ceehhhhhHHHHHHHhc----
Confidence 99999999993 5667776654322 1379999996 99974 34 58888888776441111
Q ss_pred ecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHH-HHHHhCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEc
Q 001586 392 IDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAM-YAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQ 470 (1049)
Q Consensus 392 ~d~~g~~~~~l~lqtreq~irrekaTsni~t~~~l~a~~aa~-y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~g~~~v~ 470 (1049)
.+|.++- |- .+..+.+...++ ++. ..||. .+.+....+..|+++.|.++| +.++
T Consensus 397 ------aGFIFTT-------------SL--PP~vl~GAleaVr~lk--~~eg~-~lR~~hqrnv~~~kq~l~~~G-iPVi 451 (570)
T KOG1360|consen 397 ------AGFIFTT-------------SL--PPMVLAGALEAVRILK--SEEGR-VLRRQHQRNVKYVKQLLMELG-IPVI 451 (570)
T ss_pred ------CceEEec-------------CC--ChHHHHhHHHHHHHHh--hhhhH-HHHHHHHHHHHHHHHHHHHcC-Cccc
Confidence 1132221 00 012344444444 222 23443 344556678899999999998 8887
Q ss_pred CCCCcceEEEecCC---HHHHHHHHH-HcCCeeeee-----c--CCeEEEEeccCCCHHHHHHHHHHHh
Q 001586 471 GLPFFDTVKVKCAD---AHAIASAAY-KIEMNLRVV-----D--SNTVTASFDETTTLEDVDKLFIVFA 528 (1049)
Q Consensus 471 ~~~~~~~v~i~~~~---~~~v~~~L~-~~gI~~~~~-----~--~~~vris~~~~~t~edid~lv~aL~ 528 (1049)
+.| .+.+-+.+.+ +.++.+.|. ++||++..+ . ...+|+.+|+.+|.+-++.|+++|.
T Consensus 452 ~~p-SHIiPv~vgda~l~~~~sd~Li~~h~iYvQaINyPTV~rG~E~LRiaPTP~HT~~mm~~lv~~l~ 519 (570)
T KOG1360|consen 452 PNP-SHIIPVRVGDAALAKQASDILISKHNIYVQAINYPTVARGTERLRIAPTPHHTPQMMNILVNALL 519 (570)
T ss_pred CCC-cceeeeeccCHHHHHHHHHHHHHhcCeEEEeccCCcccccceeeecCCCCCCCHHHHHHHHHHHH
Confidence 433 3345555544 567777777 569988543 1 3679999999999999999999985
No 316
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.60 E-value=2.5e-13 Score=155.33 Aligned_cols=143 Identities=25% Similarity=0.249 Sum_probs=122.9
Q ss_pred HHHHHHHHHHHhCCCCcceEeccchHHHHHHHHHHhhhccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCcchh-
Q 001586 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKDI- 291 (1049)
Q Consensus 213 l~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a~~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~~~~l- 291 (1049)
...+++.+|+|-|.+. +..+++|.+|+.+..+++. ++||+||+++.++..++..+....+++||++.++|..+.
T Consensus 65 ~~~lE~~~a~LEg~~~--~~afsSGmaAI~~~~l~ll---~~GD~vl~~~~~YG~t~~~~~~~l~~~gi~~~~~d~~~~~ 139 (396)
T COG0626 65 RDALEEALAELEGGED--AFAFSSGMAAISTALLALL---KAGDHVLLPDDLYGGTYRLFEKILQKFGVEVTFVDPGDDE 139 (396)
T ss_pred HHHHHHHHHHhhCCCc--EEEecCcHHHHHHHHHHhc---CCCCEEEecCCccchHHHHHHHHHHhcCeEEEEECCCChH
Confidence 3456689999998776 6788999999888777653 279999999999999999998888889999999987433
Q ss_pred --hc-cC-CCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccc
Q 001586 292 --DY-KS-GDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGV 361 (1049)
Q Consensus 292 --~~-l~-~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~p~~~GaDivvgs~-k~lg~ 361 (1049)
++ +. ++|++|+++.| |++-.+.||++|+++||++|++++| ++.++-+++..|-++|||||+.|+ |.+++
T Consensus 140 ~~~~~~~~~~tk~v~lEtPsNP~l~v~DI~~i~~~A~~~g~~vvV-DNTfatP~~q~PL~~GaDIVvhSaTKyl~G 214 (396)
T COG0626 140 ALEAAIKEPNTKLVFLETPSNPLLEVPDIPAIARLAKAYGALVVV-DNTFATPVLQRPLELGADIVVHSATKYLGG 214 (396)
T ss_pred HHHHHhcccCceEEEEeCCCCcccccccHHHHHHHHHhcCCEEEE-ECCcccccccChhhcCCCEEEEeccccccC
Confidence 33 44 69999999998 8999999999999999999988888 578899999999999999999999 76754
No 317
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.60 E-value=9.9e-14 Score=163.30 Aligned_cols=140 Identities=24% Similarity=0.226 Sum_probs=116.5
Q ss_pred HHHHHHHHHhCCCCcceEeccchHHHHHHHHHHhhhccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeC-cc---h
Q 001586 215 NFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSD-LK---D 290 (1049)
Q Consensus 215 e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a~~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~-~~---~ 290 (1049)
++++.+|++.|.+. +.++.+|++|+.++++++ .. +||+||++..+|..+...+...++..|+++++++ .+ +
T Consensus 73 ~Le~~lA~l~g~~~--av~~sSG~aAi~~al~al-l~--~Gd~Vv~~~~~y~~t~~~~~~~l~~~Gi~v~~vdd~~d~e~ 147 (436)
T PRK07812 73 VVEQRIAALEGGVA--ALLLASGQAAETFAILNL-AG--AGDHIVSSPRLYGGTYNLFHYTLPKLGIEVSFVEDPDDLDA 147 (436)
T ss_pred HHHHHHHHHhCCCe--EEEEccHHHHHHHHHHHH-hC--CCCEEEEeCCcchHHHHHHHHHhhcCeEEEEEECCCCCHHH
Confidence 56689999999876 678899999888877765 23 8899999999999988877666677899999985 43 3
Q ss_pred hhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-cccc
Q 001586 291 IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFG 360 (1049)
Q Consensus 291 l~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~p~~~GaDivvgs~-k~lg 360 (1049)
+++ ++++|++|++++| |++|.+.|+++|+++||++|++++|+ +.++.+.+..|.++|+|+++.|+ |.++
T Consensus 148 l~~ai~~~tklV~ie~~sNp~G~v~Dl~~I~~la~~~gi~liVD-~t~a~~~~~~pl~~GaDivv~S~tK~lg 219 (436)
T PRK07812 148 WRAAVRPNTKAFFAETISNPQIDVLDIPGVAEVAHEAGVPLIVD-NTIATPYLIRPLEHGADIVVHSATKYLG 219 (436)
T ss_pred HHHhCCCCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEE-CCCcccccCCchhcCCCEEEEecccccC
Confidence 444 7889999999987 79999999999999999999999995 35566666778889999999998 6564
No 318
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.60 E-value=3.5e-14 Score=172.48 Aligned_cols=273 Identities=13% Similarity=0.103 Sum_probs=190.2
Q ss_pred HHHHHHHHHHHHHhCCCCcceEeccchHHHHHHHHHHhhhccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc--
Q 001586 211 ESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL-- 288 (1049)
Q Consensus 211 e~l~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a~~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~~-- 288 (1049)
..+.++|+.+|+++|++.+.+ +++|+|++.-+++++.. . +||+||+++++|.|+...+.. .|++.+++.+
T Consensus 195 G~i~eAe~~AA~~fgAd~tyf-vvNGTS~~n~av~~a~~-~--~Gd~VLvdRN~HKSv~haLil----sga~PVYl~P~r 266 (714)
T PRK15400 195 GPHKEAEEYIARVFNADRSYM-VTNGTSTANKIVGMYSA-P--AGSTVLIDRNCHKSLTHLMMM----SDVTPIYFRPTR 266 (714)
T ss_pred hHHHHHHHHHHHHhCCCcEEE-EeCchHHHHHHHHHHhc-C--CCCEEEeecccHHHHHHHHHH----cCCeEEEecccc
Confidence 467899999999999998655 67888888888888753 3 899999999999999987642 5888888653
Q ss_pred ----------------chhhc-c--CCCEe---EEEEEcCCCCeeeccHHHHHHHHHhCCcEEEEE----eccccccCCC
Q 001586 289 ----------------KDIDY-K--SGDVC---GVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMA----TDLLALTILK 342 (1049)
Q Consensus 289 ----------------~~l~~-l--~~~t~---~V~v~~pn~~G~i~di~~I~~~ah~~galliV~----a~~~alg~l~ 342 (1049)
+.+++ + .++.+ .+++|+||++|.+.|+++|++++|.++ ++|+ ++......++
T Consensus 267 n~~Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~pTYdG~~yd~~~I~~~~~~~~--ilvDEAwgah~~F~p~~~ 344 (714)
T PRK15400 267 NAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNSTYDGLLYNTDFIKKTLDVKS--IHFDSAWVPYTNFSPIYE 344 (714)
T ss_pred cccCCccCCCccccCHHHHHHHHHhCccccCccEEEEECCCCccEecCHHHHHHHhCCCC--EEEEccchhhhccCcccC
Confidence 22333 2 23444 799999999999999999999999988 4663 2221112222
Q ss_pred --CCCcccc---e--EEEecC-ccccccCCCCCCceEEEEEchhHHhcCCCceeeeeecCCCCcceeeeccccccccccc
Q 001586 343 --PPGELGA---D--IVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRD 414 (1049)
Q Consensus 343 --~p~~~Ga---D--ivvgs~-k~lg~P~~~GGP~~G~l~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irre 414 (1049)
.+-..|+ | +|+.|. |.++. ++ +++++.++.. + | |-|.+
T Consensus 345 ~~sam~~ga~~~~~i~vtQStHKtL~a-lT----QaS~LHvkg~----v---------d----------------~~~~n 390 (714)
T PRK15400 345 GKCGMSGGRVEGKVIYETQSTHKLLAA-FS----QASMIHVKGD----V---------N----------------EETFN 390 (714)
T ss_pred CcChhhcCCCCCCceEEEEchhhcccc-hh----HHhHHHHcCC----C---------C----------------HHHHH
Confidence 2334677 5 999999 55542 11 3344433211 0 1 11112
Q ss_pred ccCCCccchhHHHHHHHHHH--HHHhC-cchHHHHHHHHHHHHHHHHHHhhcCCC------eEEcCCC------------
Q 001586 415 KATSNICTAQALLANMAAMY--AVYHG-PEGLKTIAQRVHGLAGTFALGLKKLGT------VEVQGLP------------ 473 (1049)
Q Consensus 415 kaTsni~t~~~l~a~~aa~y--~~~~g-~~Gl~~ia~~~~~~a~~l~~~L~~~g~------~~v~~~~------------ 473 (1049)
.+=.-..|+++.|.++|++- ..++. +.| +++.+++.+.+..+++.|.++.+ ++++++.
T Consensus 391 ~a~~m~~STSPsY~l~ASLD~a~~~m~~~~G-~~l~~~~i~~a~~~R~~l~~~~~~~~~w~~~~~~~~~~~~~~~w~~~p 469 (714)
T PRK15400 391 EAYMMHTTTSPHYGIVASTETAAAMMKGNAG-KRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRS 469 (714)
T ss_pred HHHHHHcCCCcHHHHHHHHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHHHhCCCcccCceEEecChhhcccchhcccCc
Confidence 22223345688999999983 22332 234 56778888889999999988765 5555211
Q ss_pred ---------------Ccce--EEEecC-----------C--HHHHHHHHHHcCCeeeeecCCeEEEEeccCCCHHHHHHH
Q 001586 474 ---------------FFDT--VKVKCA-----------D--AHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKL 523 (1049)
Q Consensus 474 ---------------~~~~--v~i~~~-----------~--~~~v~~~L~~~gI~~~~~~~~~vris~~~~~t~edid~l 523 (1049)
..|+ ++|.++ + +..+.+.|.++||.+...+...+.+.++..+|++++++|
T Consensus 470 ~~~whgf~~~~~~~~~lDP~Klti~tpgi~~~g~~~~~Gipg~~v~~~L~e~gI~~E~~d~~~iLfl~s~g~t~~~~~~L 549 (714)
T PRK15400 470 DSTWHGFKNIDNEHMYLDPIKVTLLTPGMKKDGTMSDFGIPASIVAKYLDEHGIVVEKTGPYNLLFLFSIGIDKTKALSL 549 (714)
T ss_pred cccccCcccccccccccCCceEEEEeCCCCCCccccccCCCHHHHHHHHHHcCCEEEecCCCeEEEEeCCCCCHHHHHHH
Confidence 1243 455442 2 568889999999999998889999999999999999999
Q ss_pred HHHHh
Q 001586 524 FIVFA 528 (1049)
Q Consensus 524 v~aL~ 528 (1049)
+++|.
T Consensus 550 ~~aL~ 554 (714)
T PRK15400 550 LRALT 554 (714)
T ss_pred HHHHH
Confidence 99996
No 319
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=99.60 E-value=1.1e-13 Score=161.31 Aligned_cols=284 Identities=14% Similarity=0.143 Sum_probs=182.7
Q ss_pred HHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCEEEEEcCCCCCC
Q 001586 635 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGN 714 (1049)
Q Consensus 635 ~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~Vv~V~~d~~g~ 714 (1049)
.++++.+++.+|.+..++..++|++. +..++++.+. .++++|+++...++.+...++..|++++.++.++++.
T Consensus 89 ~~lr~~ia~~~~~~~~~I~~t~Ga~~--~i~~~~~~~~-----~~gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~ 161 (380)
T PLN03026 89 RRLRAALAEDSGLESENILVGCGADE--LIDLLMRCVL-----DPGDKIIDCPPTFGMYVFDAAVNGAEVIKVPRTPDFS 161 (380)
T ss_pred HHHHHHHHHHhCcChhhEEEcCCHHH--HHHHHHHHhc-----CCCCEEEEcCCChHHHHHHHHHcCCEEEEeecCCCCC
Confidence 36888999999988766666666542 2223333331 2568899988765555555778999999999877788
Q ss_pred CCHHHHHHHHHhcCCCeEEEEEEcCC-ccccccccHHHHHHHHHHcCCEEEEeccccccccCcCCC----CccCCcEEEe
Q 001586 715 INIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSP----GYIGADVCHL 789 (1049)
Q Consensus 715 iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~P----g~~GaDi~~~ 789 (1049)
+|+++|+++++ .+++++|++++|+ .+|.+- +.+++.++++.. +++++|+++.. +.....+ ....-.+++.
T Consensus 162 ~d~~~l~~~~~--~~~~~~v~l~~P~NPTG~~~-~~~~l~~l~~~~-~~vi~DeaY~~-~~~~~~~~~~~~~~~~viv~~ 236 (380)
T PLN03026 162 LDVPRIVEAVE--THKPKLLFLTSPNNPDGSII-SDDDLLKILELP-ILVVLDEAYIE-FSTQESRMKWVKKYDNLIVLR 236 (380)
T ss_pred cCHHHHHHHHh--ccCCcEEEEeCCCCCCCCCC-CHHHHHHHHhcC-CEEEEECcchh-hcCCcchHHHHHhCCCEEEEe
Confidence 99999999984 1688999999995 599887 699999999865 89999998631 1110111 1122346778
Q ss_pred CCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHH
Q 001586 790 NLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLT 869 (1049)
Q Consensus 790 s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~ 869 (1049)
++.|.|++| |.++|+++.++++...+-.. ....++++ ..+ .++.+.+.. .+-++
T Consensus 237 SfSK~~gla----GlRiGy~~~~~~~i~~l~~~--------------~~~~~~~~--~~q----~aa~~aL~~--~~~~~ 290 (380)
T PLN03026 237 TFSKRAGLA----GLRVGYGAFPLSIIEYLWRA--------------KQPYNVSV--AAE----VAACAALSN--PKYLE 290 (380)
T ss_pred cchHhhcCc----cccceeeecCHHHHHHHHHh--------------cCCCCCCH--HHH----HHHHHHhhC--HHHHH
Confidence 888888644 78899999887665543100 00011111 111 112222221 12234
Q ss_pred HHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHHHCCcccCCCC-CCCCCEEEE
Q 001586 870 EASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMS-WPVPGTLMI 947 (1049)
Q Consensus 870 ~~~~~~~~~a~yL~~~L~~~-~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~-~p~~~~lri 947 (1049)
+..+...++.+++.+.|+++ ....++. .+ . -+.++++ .+.+..++.+.|.++||.+.... .+..+++||
T Consensus 291 ~~~~~~~~~r~~l~~~L~~~~~~~~~p~-~~-~--f~~~~~~-----~~~~~~~~~~~l~~~gI~v~~~~~~~~~~~lRi 361 (380)
T PLN03026 291 DVKNALVEERERLFGLLKEVPFLEPYPS-DA-N--FILCRVT-----SGRDAKKLKEDLAKMGVMVRHYNSKELKGYIRV 361 (380)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCeECCC-CC-e--EEEEECC-----CCCCHHHHHHHHHHCCeEEEECCCCCCCCEEEE
Confidence 44555666778888989875 2112221 12 2 1345543 13567889999999999875332 234579999
Q ss_pred EccCCCCHHHHHHHHHHHHHH
Q 001586 948 EPTESESKEELDRYCDALISI 968 (1049)
Q Consensus 948 ~~t~~~t~eeid~fv~aL~~i 968 (1049)
++. +.+++++|+++|+++
T Consensus 362 s~~---~~~~~~~l~~al~~~ 379 (380)
T PLN03026 362 SVG---KPEHTDALMEALKQL 379 (380)
T ss_pred ecC---CHHHHHHHHHHHHHh
Confidence 986 678999999999753
No 320
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.60 E-value=4.2e-13 Score=156.60 Aligned_cols=273 Identities=19% Similarity=0.178 Sum_probs=179.4
Q ss_pred HHHHHHHHHHHhCCCCcceEeccchHHHHHHHHHHhhhccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCcc---
Q 001586 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK--- 289 (1049)
Q Consensus 213 l~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a~~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~~~--- 289 (1049)
..++++.+|++.|.+. +..+.+|++++.++++++ .. +||+||++...|+++...+...++.+|+++++++..
T Consensus 63 ~~~Le~~lA~~~g~~~--~i~~~sG~~Ai~~~l~al-l~--~Gd~Vl~~~~~y~~t~~~~~~~~~~~gi~~~~~d~~d~e 137 (388)
T PRK07811 63 RTALEEQLAALEGGAY--GRAFSSGMAATDCLLRAV-LR--PGDHIVIPNDAYGGTFRLIDKVFTRWGVEYTPVDLSDLD 137 (388)
T ss_pred HHHHHHHHHHHhCCCc--eEEeCCHHHHHHHHHHHH-hC--CCCEEEEcCCCchHHHHHHHHhCcCCCeEEEEeCCCCHH
Confidence 4567789999999876 445678888877777665 23 889999999999998888776667789999998764
Q ss_pred hhhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCCC
Q 001586 290 DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYG 366 (1049)
Q Consensus 290 ~l~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~p~~~GaDivvgs~-k~lg~P~~~G 366 (1049)
++++ ++++|++|++++| |++|.+.|+++|+++||++|++++|+ +..+.+....|.++|+||+++|. |.|++|-+
T Consensus 138 ~l~~~i~~~tklV~ie~p~NPtg~~~dl~~I~~la~~~gi~lIvD-~a~a~~~~~~p~~~gaDivv~S~sK~l~g~~~-- 214 (388)
T PRK07811 138 AVRAAITPRTKLIWVETPTNPLLSITDIAALAELAHDAGAKVVVD-NTFASPYLQQPLALGADVVVHSTTKYIGGHSD-- 214 (388)
T ss_pred HHHHhcCcCCeEEEEECCCCCcceecCHHHHHHHHHHcCCEEEEE-CCCCccccCCchhhCCcEEEecCceeecCCCC--
Confidence 4555 7789999999998 68999999999999999999999995 45566655667789999999998 76753311
Q ss_pred CCceEEEEEch-hHHhcCCCceeeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcchHHH
Q 001586 367 GPHAAFLATSQ-EYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKT 445 (1049)
Q Consensus 367 GP~~G~l~~~~-~l~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irrekaTsni~t~~~l~a~~aa~y~~~~g~~Gl~~ 445 (1049)
=-+|++++++ ++.+++.. .|..-+ .+ ..++ .+ |+...+.+-+..
T Consensus 215 -~~gG~vv~~~~~l~~~~~~-------------------------~~~~~g---~~-~s~~---~a--~l~~~~L~tl~~ 259 (388)
T PRK07811 215 -VVGGALVTNDEELDEAFAF-------------------------LQNGAG---AV-PGPF---DA--YLTLRGLKTLAV 259 (388)
T ss_pred -cEEEEEEECCHHHHHHHHH-------------------------HHHhcC---CC-CCHH---HH--HHHHhccCcHHH
Confidence 1147777754 44333210 000001 00 0111 11 223444444566
Q ss_pred HHHHHHHHHHHHHHHhhcCCCeEEc--CC----CC-----------cceEEEecCC----HHHHHHHHHH--cCCeee--
Q 001586 446 IAQRVHGLAGTFALGLKKLGTVEVQ--GL----PF-----------FDTVKVKCAD----AHAIASAAYK--IEMNLR-- 500 (1049)
Q Consensus 446 ia~~~~~~a~~l~~~L~~~g~~~v~--~~----~~-----------~~~v~i~~~~----~~~v~~~L~~--~gI~~~-- 500 (1049)
..++..+++..+++.|++..+++-+ .. |. ..-|+|.+++ +..+.+.|.= .+..++
T Consensus 260 R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~f~~~l~~~~~~~s~G~~ 339 (388)
T PRK07811 260 RMDRHSENAEAVAEFLAGHPEVSTVLYPGLPSHPGHEVAARQMRGFGGMVSVRLAGGEEAARDFCARTKVFTLAESLGGV 339 (388)
T ss_pred HHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCchHHHHHHhcCCCCceEEEEeCCCHHHHHHHHHhCCcceeeccCCCC
Confidence 6677778999999999987546432 11 11 1247777753 3344444431 122111
Q ss_pred -------------e-------ecCCeEEEEeccCCCHHHHHHHHHHHh
Q 001586 501 -------------V-------VDSNTVTASFDETTTLEDVDKLFIVFA 528 (1049)
Q Consensus 501 -------------~-------~~~~~vris~~~~~t~edid~lv~aL~ 528 (1049)
. +.++.||+|++.-+.++=|+.|.++|.
T Consensus 340 ~sl~~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~al~ 387 (388)
T PRK07811 340 ESLIEHPSAMTHASTAGSQLEVPDDLVRLSVGIEDVADLLADLEQALG 387 (388)
T ss_pred cceEeCCcccCcccCCHhhcCCCCCEEEEEeCCCCHHHHHHHHHHHhh
Confidence 0 113679999987765555566666663
No 321
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.60 E-value=3.6e-13 Score=157.46 Aligned_cols=273 Identities=19% Similarity=0.181 Sum_probs=181.3
Q ss_pred HHHHHHHHHHHhCCCCcceEeccchHHHHHHHHHHhhhccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc---c
Q 001586 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---K 289 (1049)
Q Consensus 213 l~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a~~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~~---~ 289 (1049)
..++++.+|++.|.+. +.++.+|++++.++++++ .. +||+||++...|+++...++..++..|+++++++. +
T Consensus 66 ~~~le~~lA~l~g~~~--~i~~ssG~~Ai~~~l~al-l~--~GD~Vi~~~~~y~~~~~~~~~~~~~~Gi~v~~vd~~d~e 140 (398)
T PRK08249 66 VQAFEEKVRILEGAEA--ATAFSTGMAAISNTLYTF-LK--PGDRVVSIKDTYGGTNKIFTEFLPRMGVDVTLCETGDHE 140 (398)
T ss_pred HHHHHHHHHHHhCCCe--EEEeCChHHHHHHHHHHh-cC--CCCEEEEcCCchHHHHHHHHHHHhhCCeEEEEcCCCCHH
Confidence 4567789999999765 567788887777666554 23 88999999999999988887767778999998875 3
Q ss_pred hhhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCCC
Q 001586 290 DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYG 366 (1049)
Q Consensus 290 ~l~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~p~~~GaDivvgs~-k~lg~P~~~G 366 (1049)
++++ ++++|++|++++| |++|.+.|+++|+++||++|++++|+ +.++.+....|..+|+|++++|. |.|+++ |
T Consensus 141 ~l~~~i~~~tklV~ie~p~NPtg~v~dl~~I~~la~~~gi~livD-~t~a~~~~~~~l~~~~Divv~S~sK~l~g~---~ 216 (398)
T PRK08249 141 QIEAEIAKGCDLLYLETPTNPTLKIVDIERLAAAAKKVGALVVVD-NTFATPINQNPLALGADLVIHSATKFLSGH---A 216 (398)
T ss_pred HHHHhcCCCCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEE-CCcCccccCCchhhCCCEEeccCceecCCC---C
Confidence 4555 7889999999998 78999999999999999999999994 34454444556678999999998 767532 1
Q ss_pred CCceEEEEEchhHHhcCCCceeeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcchHHHH
Q 001586 367 GPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTI 446 (1049)
Q Consensus 367 GP~~G~l~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irrekaTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i 446 (1049)
.-.+|+++.++++.+++.. .|+..+ ++.++. .+ ++...+.+-+...
T Consensus 217 ~~~gG~vv~~~~l~~~l~~-------------------------~~~~~g----~~~s~~---~a--~l~l~~l~tL~~R 262 (398)
T PRK08249 217 DALGGVVCGSKELMEQVYH-------------------------YREING----ATMDPM---SA--YLILRGMKTLKLR 262 (398)
T ss_pred CceEEEEECCHHHHHHHHH-------------------------HHHhcC----CCCCHH---HH--HHHHhCcchHHHH
Confidence 1124677766666554410 011101 011121 11 1234455556666
Q ss_pred HHHHHHHHHHHHHHhhcCCCeE-Ec-CC----C-----------CcceEEEecCC----HHHHHHHHHH--cCCeee---
Q 001586 447 AQRVHGLAGTFALGLKKLGTVE-VQ-GL----P-----------FFDTVKVKCAD----AHAIASAAYK--IEMNLR--- 500 (1049)
Q Consensus 447 a~~~~~~a~~l~~~L~~~g~~~-v~-~~----~-----------~~~~v~i~~~~----~~~v~~~L~~--~gI~~~--- 500 (1049)
.++..+++..+++.|++...++ |. +. | +..-|+|.+.+ +.++.+.|.= .+..++
T Consensus 263 ~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~sf~~~~~~~~~~~f~~~l~l~~~~~s~G~~~ 342 (398)
T PRK08249 263 VRQQQESAMALAKYLQTHPKVEAVYYPGLETHPNHEIAKAQMRGFGGILSFVLKGGMDTVKRLLPKLRYAHRAANLGAVE 342 (398)
T ss_pred HHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEEcCCHHHHHHHHHhCCcceEccCCCCCC
Confidence 6777899999999999875454 32 11 1 11246776654 2334444431 122110
Q ss_pred ------------e----------ecCCeEEEEeccCCCHHHHHHHHHHHh
Q 001586 501 ------------V----------VDSNTVTASFDETTTLEDVDKLFIVFA 528 (1049)
Q Consensus 501 ------------~----------~~~~~vris~~~~~t~edid~lv~aL~ 528 (1049)
. +.++.||+|++.-+.++=|+.|.++|.
T Consensus 343 sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~al~ 392 (398)
T PRK08249 343 TIYGPARTTSHVENTLEERAALGIPEGLVRISVGIEDTEDLIADLEQAFA 392 (398)
T ss_pred ceeeCCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHH
Confidence 0 113679999998766655677776665
No 322
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.60 E-value=3.8e-14 Score=163.55 Aligned_cols=293 Identities=13% Similarity=0.077 Sum_probs=177.9
Q ss_pred HHHHHHHHHHHHHhhCCCc---cccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHH----HHHhcCCE
Q 001586 631 QEMFNNLGEWLCTITGFDS---FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA----TAAMCGMK 703 (1049)
Q Consensus 631 ~~~i~el~~~la~l~G~~~---~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa----~a~~~G~~ 703 (1049)
.+++.++++.+++++|.+. +.+..+||+.+.++++..+ . .++ .++++|++ |.... .++..|++
T Consensus 43 ~~~~~~~r~~l~~l~~~~~~~~vvf~~gs~T~a~~~~~~~l---~-~~~-~~~~~i~~-----g~~~~~~~~~a~~~g~~ 112 (355)
T cd00611 43 EAIVNEAESDLRELLNIPDNYKVLFLQGGATGQFAAVPLNL---L-GDK-GTADYVVT-----GAWSAKAAKEAKRYGGV 112 (355)
T ss_pred HHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhc---C-CCC-CeEEEEEC-----CHHHHHHHHHHHhcCCC
Confidence 4678899999999999743 3355566777665554433 1 122 13444443 22333 45678999
Q ss_pred EEEEcCCCCCCC-CH-HHHHHHHHhcCCCeEEEEEEcCC-ccccccccHHHHHHHHHHcCCEEEEeccccccccCcCCCC
Q 001586 704 IVSVGTDAKGNI-NI-EELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPG 780 (1049)
Q Consensus 704 Vv~V~~d~~g~i-D~-~~L~~~i~~~~~~taaV~it~Pn-~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~Pg 780 (1049)
++.++++++|.. ++ +..+..++ +++++|.+++-+ .+|+.. . ++++.+|++++||+++..+...+ ...
T Consensus 113 ~~~~~~~~~g~~~~~~~~~~~~~~---~~~~lV~~~h~~t~tG~~~---~---~i~~~~g~~~~VDa~qs~g~~~i-dv~ 182 (355)
T cd00611 113 VVIVAAKEEGKYTKIPDVETWDLA---PDAAYVHYCSNETIHGVEF---D---EVPDTGGVPLVADMSSNILSRPI-DVS 182 (355)
T ss_pred cEEEecccccCCCCCCCHhhcCCC---CCCCEEEEeCCcccccEEc---c---eecccCCCeEEEEccccccCCCC-CHH
Confidence 999998765433 52 33333344 788889888875 489863 2 34455999999999976444332 222
Q ss_pred ccCCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCC---CCCCCCCCCCCCCccchhhHHHHHHHH
Q 001586 781 YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGI---PAPEKSQPLGTIAAAPWGSALILPISY 857 (1049)
Q Consensus 781 ~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~---~~~~~~~~t~~i~sa~~g~~~~~~~a~ 857 (1049)
++ |+++.+.||+| |.||+|++++++++...++...... .+. ........|+++ ..+....
T Consensus 183 ~~--~~~~ss~~K~l------GP~G~g~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~Tpn~--------~~i~~L~ 245 (355)
T cd00611 183 KF--GVIYAGAQKNL------GPAGVTVVIVRKDLLGKARKITPSM-LNYKTHADNNSLYNTPPT--------FAIYMMG 245 (355)
T ss_pred Hh--CEEEeeccccc------CCCceEEEEECHHHHhhcccCCCCc-ccHHHHHhcCCCCCCChH--------HHHHHHH
Confidence 33 45666689976 3468999999987766554321110 000 000000112221 1122334
Q ss_pred HHHHHHchh-hHHHHHHHHHHHHHHHHHHHhccCCeeeccC---CCceeeEEEEeccCccccCCC-CHHHHHHHHHHCCc
Q 001586 858 TYIAMMGSK-GLTEASKIAILNANYMAKRLEKHYPILFRGV---NGTVAHEFIVDLRGLKNTAGI-EPEDVAKRLMDYGF 932 (1049)
Q Consensus 858 a~l~~lG~e-Gl~~~~~~~~~~a~yL~~~L~~~~~v~~~g~---~g~~~~e~iv~~~~~~~~~g~-~~~~v~k~L~~~Gi 932 (1049)
+.++.+-.+ |+..+.++..++++++.++|+++-.+ +.+. ..+....+.|.++ +. ...++.+.+.+.|+
T Consensus 246 aal~~l~~~gg~e~i~~~~~~l~~~l~~~l~~~~gl-~~~~~~~~~rs~~vvsf~~~------~~~l~~~~~~~~~r~G~ 318 (355)
T cd00611 246 LVLKWLKEQGGVEAMEKRNRQKAQLLYDTIDNSNGF-YRGPVDKRARSRMNVPFRLG------KEELEKEFLKEAEAAGM 318 (355)
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCccc-cccCCCHHHcCceEEEEEcC------ChhhhHHHHHHHHHCCC
Confidence 556666677 78888899999999999999976232 2111 1111112334433 21 12444456777999
Q ss_pred ccCCCCCCCCCEEEEEccCCCCHHHHHHHHHHHHHH
Q 001586 933 HGPTMSWPVPGTLMIEPTESESKEELDRYCDALISI 968 (1049)
Q Consensus 933 ~~~~~~~p~~~~lri~~t~~~t~eeid~fv~aL~~i 968 (1049)
+++... ...+++|+|+..++|++|||+|+++|+++
T Consensus 319 ~~~~~~-~~~g~vR~S~~~~nt~edi~~l~~al~~~ 353 (355)
T cd00611 319 IGLKGH-RSVGGIRASIYNALSLEGVQALADFMKEF 353 (355)
T ss_pred cccCCC-cccCeEEEEccCCCCHHHHHHHHHHHHHH
Confidence 865332 12489999999999999999999999885
No 323
>PRK07550 hypothetical protein; Provisional
Probab=99.60 E-value=2.2e-13 Score=158.99 Aligned_cols=349 Identities=12% Similarity=0.104 Sum_probs=203.2
Q ss_pred HHHHHHHHHHhccccCcCccccccccccccCccccccccccCc--ccccCCCCCchhhhhcHHHHHHHHHHHHHHhhCCC
Q 001586 571 HELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWP--SFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFD 648 (1049)
Q Consensus 571 ~e~~~~l~~l~~~d~~~~~~~i~lGs~t~~~~~~~~~~~~~~~--~f~~~~P~~p~e~~~G~~~~i~el~~~la~l~G~~ 648 (1049)
.+|.+.+.++.+.+. .++.|+++.+..+........... .-.....|.+ .+|..++.+.+.+++.+..|..
T Consensus 15 ~~~~~~~~~~~~~~~----~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~---~~G~~~lr~~ia~~~~~~~g~~ 87 (386)
T PRK07550 15 PEVRAWLAGYDGADG----PLIDLSQAVPGYPPPPELLRALAEAAADPAAHLYGP---VEGLPELREAYAAHYSRLYGAA 87 (386)
T ss_pred HHHHHHHHHHhhcCC----CeEEeCCCCCCCCCCHHHHHHHHHHHhCcCCcCCCC---CCCCHHHHHHHHHHHHHHhCCC
Confidence 677777777765543 356777766544322222111000 0001122332 3577677777777777776753
Q ss_pred c--cccccCch-HHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCEEEEEcCCC-C-CCCCHHHHHHH
Q 001586 649 S--FSLQPNAG-AAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA-K-GNINIEELRKA 723 (1049)
Q Consensus 649 ~--~~l~~~sG-a~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~Vv~V~~d~-~-g~iD~~~L~~~ 723 (1049)
. ..+..++| ++|.. ++++.+. .++++|+++...+..+...++..|++++.++.++ + ..+|+++|+++
T Consensus 88 ~~~~~i~~t~G~~~al~---~~~~~l~-----~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~l~~~ 159 (386)
T PRK07550 88 ISPEQVHITSGCNQAFW---AAMVTLA-----GAGDEVILPLPWYFNHKMWLDMLGIRPVYLPCDEGPGLLPDPAAAEAL 159 (386)
T ss_pred CCcceEEEecCcHHHHH---HHHHHhc-----CCCCEEEEcCCCCcchHHHHHhcCCEEEEEecCCCcCCCCCHHHHHHH
Confidence 2 33444444 44443 2233321 2578899998877666667788999999999974 3 46899999999
Q ss_pred HHhcCCCeEEEEEEcCC-cccccc--ccHHHHHHHHHHcCCEEEEeccccccccCcCCC---C---ccCC-cEEEeCCCc
Q 001586 724 AEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSP---G---YIGA-DVCHLNLHK 793 (1049)
Q Consensus 724 i~~~~~~taaV~it~Pn-~~G~i~--~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~P---g---~~Ga-Di~~~s~hK 793 (1049)
++ +++++|++++|| .+|.+- .++++|+++|+++|+++++|.++..-......+ . +.+. .+++.+++|
T Consensus 160 ~~---~~~~~v~~~~P~NPtG~~~~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK 236 (386)
T PRK07550 160 IT---PRTRAIALVTPNNPTGVVYPPELLHELYDLARRHGIALILDETYRDFDSGGGAPHDLFADPDWDDTLVHLYSFSK 236 (386)
T ss_pred hc---ccCcEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCcchhhCCCccccEEEEecchh
Confidence 97 678888898895 588764 258999999999999999999853111000111 1 1122 356778899
Q ss_pred ccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHH
Q 001586 794 TFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASK 873 (1049)
Q Consensus 794 ~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~~~ 873 (1049)
+|+.| |.++|++++++++...+... . .....+.+..++.. +...+..+ .+-+++..+
T Consensus 237 ~~g~~----G~RiG~i~~~~~~~~~~~~~-~-------------~~~~~~~s~~~q~~----~~~~l~~~-~~~~~~~~~ 293 (386)
T PRK07550 237 SYALT----GHRVGAVVASPARIAEIEKF-M-------------DTVAICAPRIGQIA----VAWGLPNL-ADWRAGNRA 293 (386)
T ss_pred hccCc----ccceEeeecCHHHHHHHHHH-H-------------hhcccCCCcHHHHH----HHHHhccH-HHHHHHHHH
Confidence 88544 56799999887655432110 0 00111111122221 11222211 222333344
Q ss_pred HHHHHHHHHHHHHhccCCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHH-HCCcccCC-CCCC--CCCEEEEEc
Q 001586 874 IAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-DYGFHGPT-MSWP--VPGTLMIEP 949 (1049)
Q Consensus 874 ~~~~~a~yL~~~L~~~~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~-~~Gi~~~~-~~~p--~~~~lri~~ 949 (1049)
...++.+++.+.|+++..+.... .+.. -++++++. .+.+..+++++|. ++|+.+.. ..|. ..+++|+++
T Consensus 294 ~~~~~~~~l~~~L~~~~~~~~~~-~g~~--~~~~~~~~----~~~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~ 366 (386)
T PRK07550 294 EIARRRDAFRAVFARLPGWELLA-SGAY--FAYVRHPF----PDRPSREVARRLAKEAGILCLPGTMFGPGQEGYLRLAF 366 (386)
T ss_pred HHHHHHHHHHHHHHhCCCceeCC-CceE--EEEecCCC----CCCCHHHHHHHHHHhcCEEEeCchhhCCCCCCEEEEEe
Confidence 45567788888887642221111 2222 23445431 1457788999875 68998643 2232 246899999
Q ss_pred cCCCCHHHHHHHHHHHHHH
Q 001586 950 TESESKEELDRYCDALISI 968 (1049)
Q Consensus 950 t~~~t~eeid~fv~aL~~i 968 (1049)
.. .+.+++++.++.|++.
T Consensus 367 ~~-~~~~~~~~~~~~l~~~ 384 (386)
T PRK07550 367 AN-ADVAGIGELVERLRAF 384 (386)
T ss_pred ec-CCHHHHHHHHHHHHhh
Confidence 74 3588899988887653
No 324
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.60 E-value=3.2e-13 Score=158.11 Aligned_cols=340 Identities=17% Similarity=0.158 Sum_probs=214.0
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHhcCCCc-cccccCCCCCCCCCcHHHHHHHHhCCcccccc--------CCChhhH--hh
Q 001586 139 MKFSKFDEGLTESQMIEHMQKLASMNKV-YKSFIGMGYYNTHVPPVILRNIMENPAWYTQY--------TPYQAEI--AQ 207 (1049)
Q Consensus 139 ~~lp~~~~~~sE~e~~~~~~~la~~n~~-~~~~lG~g~y~~~~p~~i~~~~~~~~~~~t~y--------tpyq~e~--sq 207 (1049)
..|| ++|++|..+...|.+|+.++.. +.+-.|.|--. ..|.-.+.++..|.... .--||.. |.
T Consensus 28 ~~~p--~~g~~~~~i~~~l~~l~~~~~~~~~~~~~~gere----~rv~~~~~~~~~~~~~hgigr~~~l~~~q~ka~gss 101 (444)
T TIGR03531 28 RKIP--EEGWDDETIELFLHELSVMDTNNFPNNVGVGERE----GRVFSKLVARRHYRFCHGIGRSGDLVAPQPKAAGSS 101 (444)
T ss_pred CcCC--ccCCCHHHHHHHHHHHhcCCcCCCccccCcCccc----ceeechhhhhcccceecCCCCcccccccCccccCcc
Confidence 3677 6899999999999999987643 44445666422 12212222233322221 2346663 33
Q ss_pred hHHHHHHHHHHHHHHHhCCCC-cceEeccchHH-HHHHHHHHhhhccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEE
Q 001586 208 GRLESLLNFQTMIADLTGLPM-SNASLLDEGTA-AAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVV 285 (1049)
Q Consensus 208 g~le~l~e~q~~ia~L~G~~~-~n~sl~~~~Ta-~~eA~~~a~~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~ 285 (1049)
.......+++..+++++|.+. ..+.+++++|+ +...++++++..+.++++||+++..|.++.+.+.. .|+++++
T Consensus 102 ~~~~l~~~~e~~~~~~~G~~~~~~a~~v~~~Tg~al~laL~alr~~~~~gd~VI~p~~th~S~~kAi~~----~G~~pv~ 177 (444)
T TIGR03531 102 LLYKLTNKLVKDFLKLLGLRSIKSAFVVPLATGMSLSLCLSALRHKRPKAKYVIWPRIDQKSCIKAIST----AGFEPRV 177 (444)
T ss_pred HHHHHHHHHHHHHHHHcCCCCCCEEEEECCHHHHHHHHHHHHcCCcCCCCCEEEEECcChHHHHHHHHH----cCCeEEE
Confidence 466777888899999999973 34778899995 33333344432211578999999999999988754 5778777
Q ss_pred eCc-----------chhhc-cCC---CEeEEEEEcCCCC--eeeccHHHHHHHHHhCCcEEEEEeccccccCCC------
Q 001586 286 SDL-----------KDIDY-KSG---DVCGVLVQYPGTE--GEVLDYGDFIKNAHANGVKVVMATDLLALTILK------ 342 (1049)
Q Consensus 286 v~~-----------~~l~~-l~~---~t~~V~v~~pn~~--G~i~di~~I~~~ah~~galliV~a~~~alg~l~------ 342 (1049)
+|+ +++++ +++ ++..+++.+|+++ |..+|+++|+++|+++|++++|++ ..+++...
T Consensus 178 Vd~~~d~~~~~iD~e~Le~aIt~~~~kai~~Vv~Tp~t~~~g~~ddL~eIa~la~k~gI~lIvDa-Ayg~~~~~~~~~~~ 256 (444)
T TIGR03531 178 IETVLDGDELTTDVEDIERAIEEIGPDNILCVLSTTSCFAPRSPDDIEEIAKICANYDIPHIVNN-AYGLQSNKYMELIN 256 (444)
T ss_pred eeeeecCcCCCcCHHHHHHHHHhccCCCEEEEEEcCCcCCCcchhCHHHHHHHHHHcCCEEEEEC-cCcCcChhhhhhhh
Confidence 773 24555 554 5566777777655 478999999999999999999953 22332111
Q ss_pred CCCccc-ceEEEecC-ccccccCCCCCCceEEEEEc-hhHHhcCCCceeeeeecCCCCcceeeecccccccccccccCCC
Q 001586 343 PPGELG-ADIVVGSA-QRFGVPMGYGGPHAAFLATS-QEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSN 419 (1049)
Q Consensus 343 ~p~~~G-aDivvgs~-k~lg~P~~~GGP~~G~l~~~-~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irrekaTsn 419 (1049)
+..+.| +|+++.+. |.|..|.+ +|++.++ +++.+.+.. . | +. +. ++
T Consensus 257 ~g~~~Grad~vv~s~hK~l~~pg~-----Gg~I~~~d~el~~~i~~-------~------y---------~g-~~---~~ 305 (444)
T TIGR03531 257 KAIKVGRVDAVVSSTDKNFMVPVG-----GAIIYSFDENFIQEISK-------S------Y---------PG-RA---SA 305 (444)
T ss_pred ccccccCCCeEEEeCccCCCCCCC-----EEEEEECCHHHHHHHHH-------h------c---------cC-CC---CC
Confidence 123354 79999998 77776532 4566664 556554410 0 0 00 00 01
Q ss_pred ccchhHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHhhcC----CCeEEcCCCCcce--EEEecC---C--HHHH
Q 001586 420 ICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKL----GTVEVQGLPFFDT--VKVKCA---D--AHAI 488 (1049)
Q Consensus 420 i~t~~~l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~----g~~~v~~~~~~~~--v~i~~~---~--~~~v 488 (1049)
... ..+.+.+..+|.+|++++.++..++++++.+.|+++ | .++++.+ .++ +.+.+. + ...+
T Consensus 306 ----s~~--~~~~~~ll~~G~~g~~~li~~~~~~a~~l~~~L~~l~~~~~-~~~~~~~-~n~is~~~~~~~~~~~~~~~~ 377 (444)
T TIGR03531 306 ----SPS--LDVLITLLSLGSKGYLELLKERKEMYKYLKELLQKLAERHG-ERLLDTP-ENPISSAMTLSTLKGKDPTML 377 (444)
T ss_pred ----hHH--HHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-cEeecCC-CCceeEEEecccccccCHHHH
Confidence 111 222233467899999999999999999999999875 4 5666432 122 223322 2 6788
Q ss_pred HHHHHHcCCee-eee---------------c--------CCeEEEEeccCCCHHHHHHHHHHHh
Q 001586 489 ASAAYKIEMNL-RVV---------------D--------SNTVTASFDETTTLEDVDKLFIVFA 528 (1049)
Q Consensus 489 ~~~L~~~gI~~-~~~---------------~--------~~~vris~~~~~t~edid~lv~aL~ 528 (1049)
...|-.+++-- +.+ + ..-+.+......|++|||.|++.|.
T Consensus 378 g~~l~~~~v~g~r~v~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~g~~~~~~~~~~~~l~ 441 (444)
T TIGR03531 378 GSMLYSRRVTGPRVVTNGDSKTVGGCEFKGYGSHTSNYPCPYITAAAAIGMTKEDVDTFVSRLE 441 (444)
T ss_pred HHHHHhCCCCCceeecCCCceEECCEEeecccccccCCCchhHHHHHHhCCcHHHHHHHHHHHh
Confidence 88888887721 111 0 0124444455678999999998885
No 325
>PLN00144 acetylornithine transaminase
Probab=99.60 E-value=3.8e-13 Score=156.71 Aligned_cols=285 Identities=18% Similarity=0.269 Sum_probs=185.5
Q ss_pred HHHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCC-------CCEEE-EcCCCCCccHHHHHhcCC---
Q 001586 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHH-------RNVCI-IPVSAHGTNPATAAMCGM--- 702 (1049)
Q Consensus 634 i~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~-------r~~VL-ip~saHg~~pa~a~~~G~--- 702 (1049)
..++.+.|+++++.+. .++.+||+++++++++.+|.|...+|..+ |.+|| +..+.||....+....+-
T Consensus 59 ~~~la~~l~~~~~~~~-v~f~~sGseA~e~AlklAr~~~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~ 137 (382)
T PLN00144 59 QVELAKRLVASSFADR-VFFCNSGTEANEAAIKFARKYQRVRAPDKKDPAASSATEFVSFSNSFHGRTLGALALTSKEQY 137 (382)
T ss_pred HHHHHHHHHhcCCCCe-EEEeCCcHHHHHHHHHHHHHHHhccCCCCccccccccceEEEECCCcccccHHHHhcCCCccc
Confidence 3477888888887654 47789999999999999998864333211 35566 678899987665443221
Q ss_pred ---------EEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-Ccccccc-cc--HHHHHHHHHHcCCEEEEeccc
Q 001586 703 ---------KIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE-EG--IDEICKIIHDNGGQVYMDGAN 769 (1049)
Q Consensus 703 ---------~Vv~V~~d~~g~iD~~~L~~~i~~~~~~taaV~it~P-n~~G~i~-~d--i~eI~~lah~~G~ll~vD~A~ 769 (1049)
.++.+|. -|+++|++.+. .+++++|+++.. +..|++. +. +++|.++|++||+++++|.++
T Consensus 138 ~~~~~~~~~~~~~~~~-----~d~~~l~~~~~--~~~~aavi~eP~q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~ 210 (382)
T PLN00144 138 RTPFEPLMPGVTFVEY-----GNLEAARKLIQ--KGKTAAVFVEPVQGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQ 210 (382)
T ss_pred cccCCCCCCCeEEeCC-----CCHHHHHHhcC--CCCeEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechh
Confidence 1344444 37899999885 257888877643 2335543 24 899999999999999999975
Q ss_pred cccccCcCCCC--------ccCCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCC
Q 001586 770 MNAQVGLTSPG--------YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGT 841 (1049)
Q Consensus 770 ~~a~~gl~~Pg--------~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~ 841 (1049)
.++.+.| ...+|++++ .|.++ ||-.+|++++++++.+.+.... +
T Consensus 211 ----tg~gr~g~~~~~~~~~~~PDi~t~--sK~l~-----~G~pig~v~~~~~~~~~~~~~~---------~-------- 262 (382)
T PLN00144 211 ----CGLGRTGYLWAHEAYGVEPDIMTL--AKPLA-----GGLPIGAVLVTEKVASAINPGD---------H-------- 262 (382)
T ss_pred ----hCCCccchHhhhhhcCCCCCEEEe--ccccc-----CCcceEEEEEcHHHHhccCCCC---------C--------
Confidence 3343322 124687766 58774 3445788888888776542110 0
Q ss_pred CCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc---CCee--eccCCCceeeEEEEeccCccccC
Q 001586 842 IAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRGLKNTA 916 (1049)
Q Consensus 842 i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~---~~v~--~~g~~g~~~~e~iv~~~~~~~~~ 916 (1049)
.++..++++.++++.+.|..+-.+++.+. ...+.+++.+.|+++ +... +.| .|. + +.+.+.
T Consensus 263 -~~T~~~~pl~~aaa~a~l~~i~~~~~~~~---~~~~g~~l~~~l~~~~~~~~~~~~vrg-~G~-~--~~l~l~------ 328 (382)
T PLN00144 263 -GSTFAGGPLVCNAALAVLDKISKPGFLAS---VAKKGEYLRELLRRKLGGNPHVKEVRG-VGL-L--VGIQLD------ 328 (382)
T ss_pred -CCCCCCCHHHHHHHHHHHHHHhhchHHHH---HHHHHHHHHHHHHHHHhhCCCceeeec-Cce-E--EEEEec------
Confidence 01123456666777777888765555443 334555666666543 2211 112 232 2 233332
Q ss_pred CCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEccCCCCHHHHHHHHHHHHHHHHH
Q 001586 917 GIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREE 971 (1049)
Q Consensus 917 g~~~~~v~k~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~eeid~fv~aL~~i~~~ 971 (1049)
.+...+.+++.++|+.+..... .+.+|++|+...+++|+|.+++.|.+++.+
T Consensus 329 -~~~~~~~~~~~~~Gv~i~~~~~--~~~lrl~p~~~~~~~~i~~~~~~l~~~l~~ 380 (382)
T PLN00144 329 -VPAGPLVDACRDSGLLVLTAGK--GDVVRLVPPLVISEAELEQAVEILADCLPA 380 (382)
T ss_pred -CccHHHHHHHHHCCeEEeecCC--CCEEEEeCCCccCHHHHHHHHHHHHHHHHh
Confidence 2346788999999998753221 379999999988999999999999988754
No 326
>PLN02242 methionine gamma-lyase
Probab=99.60 E-value=1.7e-13 Score=160.95 Aligned_cols=217 Identities=18% Similarity=0.154 Sum_probs=152.6
Q ss_pred HHHHHHHHHHHhCCCCcceEeccchHHHHHHHHHHhhhccCCCCEEEEcCCCCHHHHHHHHHh-hcCCCeEEEEeCcc--
Q 001586 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITR-ADGFDIKVVVSDLK-- 289 (1049)
Q Consensus 213 l~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a~~~~~~~g~~Vlv~~~~Hps~~~~l~~~-a~~~gi~v~~v~~~-- 289 (1049)
..++++.+|++.|.+. +.++.+|++++.++++++. . +||+||++...|+.+...+... .+..|+++++++..
T Consensus 78 ~~~LE~~lA~l~g~~~--~l~~~sG~~Ai~~al~al~-~--~GD~Vl~~~~~Y~~~~~~~~~~~~~~~G~~~~~~d~~d~ 152 (418)
T PLN02242 78 VLNLGRQMAALEGTEA--AYCTASGMSAISSVLLQLC-S--SGGHVVASNTLYGGTHALLAHFLPRKCNITTTFVDITDL 152 (418)
T ss_pred HHHHHHHHHHHhCCCe--EEEEccHHHHHHHHHHHHh-C--CCCEEEEcCCcHHHHHHHHHHhhhhccCceEEEcCCCCH
Confidence 4557789999999876 5678999988887776652 3 8999999999999887776433 33479999888764
Q ss_pred -hhhc-cCC-CEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCC
Q 001586 290 -DIDY-KSG-DVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMG 364 (1049)
Q Consensus 290 -~l~~-l~~-~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~p~~~GaDivvgs~-k~lg~P~~ 364 (1049)
++++ +++ ++++|++++| |++|.+.|+++|+++||++|++++|+ +.++. +...+.++|+||+++|. |.|+++
T Consensus 153 e~l~~~i~~~~tklV~lesp~NPtG~v~dl~~I~~la~~~gi~livD-ea~~~-~~~~~~~~g~divv~S~SK~l~g~-- 228 (418)
T PLN02242 153 EAVKKAVVPGKTKVLYFESISNPTLTVADIPELARIAHEKGVTVVVD-NTFAP-MVLSPARLGADVVVHSISKFISGG-- 228 (418)
T ss_pred HHHHHhcCcCCCEEEEEecCCCCCCcccCHHHHHHHHHHhCCEEEEE-CCCCc-cCCCHHHcCCcEEEEeCccccCCC--
Confidence 4555 777 4999999998 78999999999999999999999995 44442 33466788999999998 777542
Q ss_pred CCCCceEEEEEchhHHhcCCCceeeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcchHH
Q 001586 365 YGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLK 444 (1049)
Q Consensus 365 ~GGP~~G~l~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irrekaTsni~t~~~l~a~~aa~y~~~~g~~Gl~ 444 (1049)
|..-+|++++++++...+... + +. + ....|. .+....|++ ...+.+-+.
T Consensus 229 -g~~~gG~iv~~~~li~~l~~~--------------------~-~~-~----~~~~g~--~~~~~~A~l--~~~~l~tl~ 277 (418)
T PLN02242 229 -ADIIAGAVCGPAELVNSMMDL--------------------H-HG-A----LMLLGP--TMNPKVAFE--LSERLPHLS 277 (418)
T ss_pred -CCceEEEEEcCHHHHHHHHHH--------------------h-hh-h----hhccCC--CCCHHHHHH--HHcCCCcHH
Confidence 223368888887776544100 0 00 0 000110 111112222 334444566
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCeEEc
Q 001586 445 TIAQRVHGLAGTFALGLKKLGTVEVQ 470 (1049)
Q Consensus 445 ~ia~~~~~~a~~l~~~L~~~g~~~v~ 470 (1049)
...++..+++.++++.|++++ ++++
T Consensus 278 ~r~~~~~~~a~~la~~L~~~~-~~V~ 302 (418)
T PLN02242 278 LRMKEHCRRAMEYAKRMKELG-LKVI 302 (418)
T ss_pred HHHHHHHHHHHHHHHHHHhCC-CEEE
Confidence 666788899999999999987 7775
No 327
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.60 E-value=5.6e-13 Score=157.19 Aligned_cols=294 Identities=13% Similarity=0.162 Sum_probs=183.5
Q ss_pred HHHHHHHHHHhhCCC--ccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEE-EcCCCCCccHHHHHhcCC--------
Q 001586 634 FNNLGEWLCTITGFD--SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGM-------- 702 (1049)
Q Consensus 634 i~el~~~la~l~G~~--~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VL-ip~saHg~~pa~a~~~G~-------- 702 (1049)
..++.+.|+++++.. ...++.+||+++++++++.+|.| . +|.+|| ...+.||....+....|.
T Consensus 85 ~~~la~~l~~~~p~~~~~~~~f~~sGseA~e~AlklAr~~---t---gr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~ 158 (421)
T PRK09792 85 YVTLAEKINALAPVSGQAKTAFFTTGAEAVENAVKIARAH---T---GRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGF 158 (421)
T ss_pred HHHHHHHHHHhCCCCCCceEEEeCChHHHHHHHHHHHHHh---c---CCCeEEEECCCcCCccHHHHhhcCCCcccccCC
Confidence 347778888887532 22466789999999999988876 2 345666 678899987655433221
Q ss_pred -----EEEEEcCCC--CCC---CCHHHHHHHHHhc--CCCeEEEEEEcC-Ccccccccc---HHHHHHHHHHcCCEEEEe
Q 001586 703 -----KIVSVGTDA--KGN---INIEELRKAAEAN--RDNLSTLMVTYP-STHGVYEEG---IDEICKIIHDNGGQVYMD 766 (1049)
Q Consensus 703 -----~Vv~V~~d~--~g~---iD~~~L~~~i~~~--~~~taaV~it~P-n~~G~i~~d---i~eI~~lah~~G~ll~vD 766 (1049)
.++.+|+.. ++. -|++++++.++++ .+++++|+++.. +..|+..++ +++|.++|+++|+++++|
T Consensus 159 ~~~~~~~~~v~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~D 238 (421)
T PRK09792 159 GPFPGSVYHVPYPSDLHGISTQDSLDAIERLFKSDIEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIAD 238 (421)
T ss_pred CCCCCCcEEcCCCcccccccHHHHHHHHHHHHHhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEe
Confidence 234444422 121 2457888888642 367888888754 346755433 999999999999999999
Q ss_pred ccccccccCcCCCCc--------cCCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCC
Q 001586 767 GANMNAQVGLTSPGY--------IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQP 838 (1049)
Q Consensus 767 ~A~~~a~~gl~~Pg~--------~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~ 838 (1049)
+++ .++.+.|. ..+|++++ .|.++ ||-.+|++++++++...+.... +
T Consensus 239 Ev~----tg~gr~G~~~a~~~~~~~pDi~t~--gK~l~-----~G~pigav~~~~~i~~~~~~~~---------~----- 293 (421)
T PRK09792 239 EVQ----SGFARTGKLFAMDHYADKPDLMTM--AKSLA-----GGMPLSGVVGNANIMDAPAPGG---------L----- 293 (421)
T ss_pred ccc----cCCCCCCchhHHHhcCCCCcEEEe--ehhhc-----CCCceEEEEEcHHHHhccCCCC---------c-----
Confidence 974 33433331 24687766 58774 3445788888887776543110 0
Q ss_pred CCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc---CCeeeccCCC-ceeeEEEEeccCc-c
Q 001586 839 LGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPILFRGVNG-TVAHEFIVDLRGL-K 913 (1049)
Q Consensus 839 t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~---~~v~~~g~~g-~~~~e~iv~~~~~-~ 913 (1049)
.+++.|+++.++++.+.+..+.++.+. ++...+.+++.+.|+.+ +.... ...| ..+ +.+.+..- .
T Consensus 294 ----~~T~~gnpl~~aaa~a~l~~l~~~~~~---~~~~~~g~~l~~~l~~l~~~~p~v~-~vrG~Gl~--~~ie~~~~~~ 363 (421)
T PRK09792 294 ----GGTYAGNPLAVAAAHAVLNIIDKESLC---ERANQLGQRLKNTLIDAKESVPAIA-AVRGLGSM--IAAEFNDPQT 363 (421)
T ss_pred ----CCCCCCCHHHHHHHHHHHHHHHhhhHH---HHHHHHHHHHHHHHHHHHHhCCCcc-eecccceE--EEEEecCCcc
Confidence 111234666677777888887655433 33445667777777654 33211 1112 122 33443210 0
Q ss_pred c-cCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEccCCCCHHHHHHHHHHHHHHH
Q 001586 914 N-TAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIR 969 (1049)
Q Consensus 914 ~-~~g~~~~~v~k~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~eeid~fv~aL~~i~ 969 (1049)
. ........+.+.+.++|+.+.... +..+.+|+.|+...+++|||+++++|.+++
T Consensus 364 ~~~~~~~~~~l~~~~~~~Gv~i~~~g-~~~~~irl~P~l~i~~~ei~~~~~~l~~~l 419 (421)
T PRK09792 364 GEPSAAIAQKIQQRALAQGLLLLTCG-AYGNVIRFLYPLTIPDAQFDAAMKILQDAL 419 (421)
T ss_pred CCcchHHHHHHHHHHHHCCcEEeecC-CCCCEEEEeCCCcCCHHHHHHHHHHHHHHH
Confidence 0 000124567888889999874211 224899999999999999999999998875
No 328
>PRK07777 aminotransferase; Validated
Probab=99.60 E-value=1.7e-13 Score=160.10 Aligned_cols=298 Identities=16% Similarity=0.126 Sum_probs=183.6
Q ss_pred hcHHHHHHHHHHHHHHhhCCCc--c--ccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCE
Q 001586 628 QGYQEMFNNLGEWLCTITGFDS--F--SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMK 703 (1049)
Q Consensus 628 ~G~~~~i~el~~~la~l~G~~~--~--~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~ 703 (1049)
+|..++...+.+++.+.+|.+. . .+..++|++|..+++. .+. .++++|+++...|+.+...++..|.+
T Consensus 61 ~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~---~~~-----~~gd~vli~~p~y~~~~~~~~~~g~~ 132 (387)
T PRK07777 61 PGIPELRAAIAAQRRRRYGLEYDPDTEVLVTVGATEAIAAAVL---GLV-----EPGDEVLLIEPYYDSYAAVIAMAGAH 132 (387)
T ss_pred CCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHHHHHH---Hhc-----CCCCEEEEeCCCchhhHHHHHHCCCE
Confidence 5666666667777777778652 1 2444555555543333 221 25678998887776666667889999
Q ss_pred EEEEcCCCC---CCCCHHHHHHHHHhcCCCeEEEEEEcCC-cccccc--ccHHHHHHHHHHcCCEEEEeccccc-cccC-
Q 001586 704 IVSVGTDAK---GNINIEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMN-AQVG- 775 (1049)
Q Consensus 704 Vv~V~~d~~---g~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~--~di~eI~~lah~~G~ll~vD~A~~~-a~~g- 775 (1049)
++.++++++ +.+|+++|+++++ +++++|++++|+ .+|.+- +++++|+++|+++|+++++|.++.. ...+
T Consensus 133 ~~~~~~~~~~~~~~~d~~~l~~~~~---~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~ 209 (387)
T PRK07777 133 RVPVPLVPDGRGFALDLDALRAAVT---PRTRALIVNSPHNPTGTVLTAAELAAIAELAVEHDLLVITDEVYEHLVFDGA 209 (387)
T ss_pred EEEeecCCccCCCcCCHHHHHHhcC---cccEEEEEcCCCCCCCccCCHHHHHHHHHHHHhcCcEEEEeccchhcccCCC
Confidence 999998754 4699999999886 678999999995 588763 2599999999999999999998631 1101
Q ss_pred ----cC-CCCccCCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhH
Q 001586 776 ----LT-SPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSA 850 (1049)
Q Consensus 776 ----l~-~Pg~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~ 850 (1049)
+. .++..+.++++.+++|+|++| |-++|++++++++...+-.. ........++ +. +.
T Consensus 210 ~~~~~~~~~~~~~~~i~~~S~SK~~g~~----GlRiG~~~~~~~l~~~~~~~------------~~~~~~~~~~-~~-q~ 271 (387)
T PRK07777 210 RHLPLATLPGMRERTVTISSAAKTFNVT----GWKIGWACGPAPLIAAVRAA------------KQYLTYVGGA-PF-QP 271 (387)
T ss_pred CcccHhhCCCCcCcEEEEeechhhccCc----CceeEEEecCHHHHHHHHHH------------HhhcccCCCC-HH-HH
Confidence 11 122234678899999998544 56689999887655433110 0000001111 11 11
Q ss_pred HHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHH-
Q 001586 851 LILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM- 928 (1049)
Q Consensus 851 ~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~-~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~- 928 (1049)
++..++. .+.+-+++..+...++.+++.+.|++. +++ ++ +++.++ ++++++... ..+..++++.|.
T Consensus 272 ----~~~~~l~-~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~-~~g~~~--~~~~~~~~~---~~~~~~~~~~l~~ 339 (387)
T PRK07777 272 ----AVAHALD-HEDAWVAALRDSLQAKRDRLAAGLAEAGFEV-HD-SAGTYF--LCADPRPLG---YDDGTEFCRALPE 339 (387)
T ss_pred ----HHHHHHh-CCcHHHHHHHHHHHHHHHHHHHHHHhCCCCc-cC-CCcceE--EEecccccC---CCCHHHHHHHHHH
Confidence 1122222 123334444556667888999999875 333 22 222221 234543110 135688999996
Q ss_pred HCCcccCC-CCCC-----CCCEEEEEccCCCCHHHHHHHHHHHHHH
Q 001586 929 DYGFHGPT-MSWP-----VPGTLMIEPTESESKEELDRYCDALISI 968 (1049)
Q Consensus 929 ~~Gi~~~~-~~~p-----~~~~lri~~t~~~t~eeid~fv~aL~~i 968 (1049)
++|+.+.. -.|. ..+++|+++.. +++++++.++.|.++
T Consensus 340 ~~gv~v~pg~~f~~~~~~~~~~~Ri~~~~--~~~~l~~~l~~l~~~ 383 (387)
T PRK07777 340 RVGVAAIPMSVFYDPADAWNHLVRFAFCK--RDDTLDEAIRRLRAL 383 (387)
T ss_pred hCCEEEeCchHhCCCCcCCCCeEEEEecC--CHHHHHHHHHHHHHH
Confidence 57998632 2221 14689999964 578888888777654
No 329
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.60 E-value=1.5e-13 Score=160.97 Aligned_cols=295 Identities=17% Similarity=0.134 Sum_probs=188.7
Q ss_pred HHHHHHHHHHHhCCCCcceEeccchHHHHHHHHHHhhhccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc----
Q 001586 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---- 288 (1049)
Q Consensus 213 l~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a~~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~~---- 288 (1049)
..++++.+|++.|.+. +..+.+|++|+.++++++ .. +||+||++...|..+...+......+|+++++++.
T Consensus 63 v~~lE~~la~leg~~~--av~~~SG~aAi~~al~al-l~--~GD~VI~~~~~Y~~T~~~~~~~l~~~Gi~v~~vd~~~d~ 137 (432)
T PRK06702 63 LAAFEQKLAELEGGVG--AVATASGQAAIMLAVLNI-CS--SGDHLLCSSTVYGGTFNLFGVSLRKLGIDVTFFNPNLTA 137 (432)
T ss_pred HHHHHHHHHHHhCCCc--EEEECCHHHHHHHHHHHh-cC--CCCEEEECCCchHHHHHHHHHHHHHCCCEEEEECCCCCH
Confidence 4457789999999875 677999999999888765 23 89999999999999988877656778999999876
Q ss_pred chhhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCC
Q 001586 289 KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGY 365 (1049)
Q Consensus 289 ~~l~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~p~~~GaDivvgs~-k~lg~P~~~ 365 (1049)
+++++ ++++|++|++++| |+.+.+.|+++|+++||++|++++++ +.++.+.+..|.++||||++.|. |.++++-.
T Consensus 138 ~~l~~~I~~~Tk~I~~e~pgnP~~~v~Di~~I~~iA~~~gi~livD-~T~~tP~~~~pl~~GADIvv~S~TKy~~Ghsd- 215 (432)
T PRK06702 138 DEIVALANDKTKLVYAESLGNPAMNVLNFKEFSDAAKELEVPFIVD-NTLATPYLCQAFEHGANIIVHSTTKYIDGHAS- 215 (432)
T ss_pred HHHHHhCCcCCeEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEE-CCCCchhhCChhhcCCCEEEEccccccCCCcc-
Confidence 35666 8899999999888 89999999999999999999999995 45666777788999999999998 77765321
Q ss_pred CCCceEEEEEchhHHhcCC--CceeeeeecCCCCcceeeecc---ccc-------ccccccccCCCccchhHHHHHHHHH
Q 001586 366 GGPHAAFLATSQEYKRMMP--GRIVGVSIDSSGKPALRVAMQ---TRE-------QHIRRDKATSNICTAQALLANMAAM 433 (1049)
Q Consensus 366 GGP~~G~l~~~~~l~~~lp--grivG~s~d~~g~~~~~l~lq---tre-------q~irrekaTsni~t~~~l~a~~aa~ 433 (1049)
+ -+|.+..+..+.-... ..++- .| ... +.+.+. .|. ...+|.-| .| .+++ ..
T Consensus 216 ~--l~G~v~~~~~~~w~~~~~~~l~~--~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g---~~-~sp~-----~a 279 (432)
T PRK06702 216 S--LGGIVIDGGNFDWTNGKYPELVE--PD--PSY-HGVSYVQNFGAAAYIVKARVQLLRDYG---NC-MSPF-----NA 279 (432)
T ss_pred e--eceEEEeCCCccccccccccccc--cc--ccc-cccchhhccchhhHHHHHHHHHHHHcc---CC-CCHH-----HH
Confidence 1 2233332221110000 00000 00 000 000000 000 01112111 11 1222 11
Q ss_pred HHHHhCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEc--CC----C--------C---c-ceEEEecCC----HHHHHHH
Q 001586 434 YAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQ--GL----P--------F---F-DTVKVKCAD----AHAIASA 491 (1049)
Q Consensus 434 y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~g~~~v~--~~----~--------~---~-~~v~i~~~~----~~~v~~~ 491 (1049)
|+...|-+-++.+.++..+++..+++.|++.+.++.+ +. + . + .-|+|.+++ +.++.+.
T Consensus 280 ~l~~rgL~Tl~lR~~r~~~Na~~la~~L~~~p~V~~V~yPgl~~~p~~~l~~~~~~~g~gg~~sf~l~~~~~~~~~f~~~ 359 (432)
T PRK06702 280 YISNIGLETLHLRMERHSENALAVAKWLADHERIEWVNYPGLDSNENYSLAQKYLKKGASGVLTFGIKGGLEAAKEFIAN 359 (432)
T ss_pred HHHHhccCcHHHHHHHHHHHHHHHHHHHHhCCCcceEECCCCCCCccHHHHHHhCcCCCceEEEEEecCCHHHHHHHHHh
Confidence 3455566667777788889999999999987545432 11 1 0 1 247777653 2344444
Q ss_pred HHHc--CCeee---------------e----------ecCCeEEEEeccCCCHHHHHHHHHHHhCC
Q 001586 492 AYKI--EMNLR---------------V----------VDSNTVTASFDETTTLEDVDKLFIVFAGG 530 (1049)
Q Consensus 492 L~~~--gI~~~---------------~----------~~~~~vris~~~~~t~edid~lv~aL~~~ 530 (1049)
|.=. +..++ . +.++.||+|+..-+.++=|+.|.++|...
T Consensus 360 l~l~~~a~slGg~~Slv~~p~~~th~~~~~~~~~~~Gi~~~liRlSvGlEd~eDLi~Dl~~Al~~~ 425 (432)
T PRK06702 360 VKLATLVTHVADARTCVIHPASTTHRQLSAEDQRLAGVTSDLIRLSVGIEDVSDIIADLEAALVGG 425 (432)
T ss_pred CccceeccccCCCCcceECCCCCCcccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHhcC
Confidence 4311 22110 0 11367999999877666678888888654
No 330
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.60 E-value=1.1e-13 Score=161.97 Aligned_cols=216 Identities=16% Similarity=0.226 Sum_probs=147.9
Q ss_pred HHHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHH----HHhcCCEEEEEcC
Q 001586 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGT 709 (1049)
Q Consensus 634 i~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~----a~~~G~~Vv~V~~ 709 (1049)
..++++.++++.|.+.+.+ .++|..+..+++++.. +++++||++...++.+... +...|++++.++.
T Consensus 67 ~~~Le~~lA~l~G~~~~~~-~~sG~~Ai~~~l~~~l--------~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~ 137 (398)
T PRK07504 67 VDMFEKRMCALEGAEDARA-TASGMAAVTAAILCQV--------KAGDHVVAARALFGSCRYVVETLLPRYGIESTLVDG 137 (398)
T ss_pred HHHHHHHHHHHhCCCeeeE-ecCHHHHHHHHHHHHh--------CCCCEEEEcCCchhHHHHHHHHHHhhcCeEEEEECC
Confidence 3478899999999987644 5577666643333211 2568999988766654332 3457999988863
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-ccccccccHHHHHHHHHHcCCEEEEeccccccccCcCCCCccCCcEEE
Q 001586 710 DAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1049)
Q Consensus 710 d~~g~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~Pg~~GaDi~~ 788 (1049)
+|+++++++++ ++|++|++++|+ .+|.+. |+++|+++||++|++++||+++... .+..|.++|+|+++
T Consensus 138 -----~d~e~l~~ai~---~~tklV~lesp~NptG~v~-dl~~I~~la~~~gi~lvvD~a~a~~--~~~~~~~~gaDivv 206 (398)
T PRK07504 138 -----LDLDNWEKAVR---PNTKVFFLESPTNPTLEVI-DIAAVAKIANQAGAKLVVDNVFATP--LFQKPLELGAHIVV 206 (398)
T ss_pred -----CCHHHHHHhcC---cCceEEEEECCCCCCcEec-CHHHHHHHHHHcCCEEEEECCcccc--ccCCchhhCCCEEE
Confidence 79999999997 799999999995 589887 7999999999999999999986432 23567788999999
Q ss_pred eCCCcccccCCCCCCCce-eEEEEcccccc-cCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchh
Q 001586 789 LNLHKTFCIPHGGGGPGM-GPIGVKKHLAP-FLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSK 866 (1049)
Q Consensus 789 ~s~hK~f~~P~g~GGPg~-G~i~~~~~l~~-~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~e 866 (1049)
.|+||+|+. .|..+ |+++.++++.. .+... . + ..+...+ + ..+| +...|-+
T Consensus 207 ~S~sK~l~g----~g~~~GG~vv~~~~~i~~~~~~~---~--------~--~~g~~~s-~-------~~A~--~~l~~L~ 259 (398)
T PRK07504 207 YSATKHIDG----QGRCLGGVVLSDKAWIEEHLQDY---F--------R--HTGPSLS-P-------FNAW--TLLKGLE 259 (398)
T ss_pred eeccccccC----CccceEEEEEeCcHHHHHHHHHH---H--------H--HhCCCCC-H-------HHHH--HHHhccc
Confidence 999999852 13334 57776654332 11100 0 0 0011111 1 1123 3344555
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcc---CCeeecc
Q 001586 867 GLTEASKIAILNANYMAKRLEKH---YPILFRG 896 (1049)
Q Consensus 867 Gl~~~~~~~~~~a~yL~~~L~~~---~~v~~~g 896 (1049)
-+..+.++..+++..+.+.|+++ ..|.|+|
T Consensus 260 tl~~R~~~~~~na~~la~~L~~~p~v~~v~yp~ 292 (398)
T PRK07504 260 TLPVRVRQQTESAAAIADFLAGHPKVARVIYPG 292 (398)
T ss_pred hHHHHHHHHHHHHHHHHHHHHcCCCccEEECCC
Confidence 67777788889999999999875 3456665
No 331
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.60 E-value=2.8e-13 Score=158.78 Aligned_cols=275 Identities=20% Similarity=0.183 Sum_probs=179.9
Q ss_pred HHHHHHHHHHHhCCCCcceEeccchHHHHHHHHHHhhhccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCcc---
Q 001586 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK--- 289 (1049)
Q Consensus 213 l~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a~~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~~~--- 289 (1049)
..++++.+|++.|.+. +.++.+|++++..+++++ .. +||+||++...|+.+...+...++..|++++.+|.+
T Consensus 67 ~~~le~~lA~l~g~~~--~i~~~sG~~Al~~~l~~l-l~--~Gd~Viv~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~ 141 (403)
T PRK07503 67 LALLEQRMASLEGGEA--AVALASGMGAITATLWTL-LR--PGDEVIVDQTLYGCTFAFLHHGLGEFGVTVRHVDLTDPA 141 (403)
T ss_pred HHHHHHHHHHHhCCCc--EEEEcCHHHHHHHHHHHH-cC--CCCEEEEccCccchHHHHHHHHHhhCCEEEEEeCCCCHH
Confidence 3456789999999875 567788888777666554 23 899999999999887777666667789999998864
Q ss_pred hhhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCCC
Q 001586 290 DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYG 366 (1049)
Q Consensus 290 ~l~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~p~~~GaDivvgs~-k~lg~P~~~G 366 (1049)
++++ ++++|++|++.+| |++|.+.|+++|+++||++|++++|+ +..+.+....|..+|+||+++|. |.|++| |
T Consensus 142 ~l~~~i~~~tklV~le~p~NPtG~~~di~~I~~la~~~gi~lIvD-~a~a~~~~~~~l~~g~Di~v~S~tK~l~g~---g 217 (403)
T PRK07503 142 ALKAAISDKTRMVYFETPANPNMRLVDIAAVAEIAHGAGAKVVVD-NTYCTPYLQRPLELGADLVVHSATKYLGGH---G 217 (403)
T ss_pred HHHHhcCccCcEEEEeCCCCCCCeeeCHHHHHHHHHHcCCEEEEE-CCCcccccCCchhhCCCEEEccccccccCC---C
Confidence 4555 7788999999988 79999999999999999999999994 45555555566678999999998 777532 2
Q ss_pred CCceEEEEEchhHHhcCCCceeeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcchHHHH
Q 001586 367 GPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTI 446 (1049)
Q Consensus 367 GP~~G~l~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irrekaTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i 446 (1049)
+..+|++..++++.+++.. .+ . +. ....|. +++ .|+ +...+.+-+...
T Consensus 218 d~~gG~v~~~~~l~~~l~~--~~---------------------~-~~--~~g~~~-s~~---~a~--l~l~~L~tl~~r 265 (403)
T PRK07503 218 DITAGLVVGGKALADRIRL--EG---------------------L-KD--MTGAVM-SPF---DAF--LLMRGLKTLALR 265 (403)
T ss_pred ceeEEEEEcCHHHHHHHHh--hh---------------------H-Hh--CcCCCC-CHH---HHH--HHHcCcchHHHH
Confidence 2336888877776655410 00 0 00 001111 121 111 133333444445
Q ss_pred HHHHHHHHHHHHHHhhcCCCeEEc--CC----CC----------c-ceEEEecCC-H---HHHHHHHHH--cCCeee---
Q 001586 447 AQRVHGLAGTFALGLKKLGTVEVQ--GL----PF----------F-DTVKVKCAD-A---HAIASAAYK--IEMNLR--- 500 (1049)
Q Consensus 447 a~~~~~~a~~l~~~L~~~g~~~v~--~~----~~----------~-~~v~i~~~~-~---~~v~~~L~~--~gI~~~--- 500 (1049)
.++..+++..+.+.|++...++.+ +. +. + .-|+|.+++ . ..+.+.|.- .+..++
T Consensus 266 ~~~~~~na~~~a~~L~~~p~v~~V~~P~l~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~l~l~~~~~slG~~~ 345 (403)
T PRK07503 266 MDRHCASAQAVAEWLARHPAVELVHYPGLPSFAQHALAQRQMALPGGMIAFELKGGIAAGRRFMNALQLFARAVSLGDAE 345 (403)
T ss_pred HHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEECCCHHHHHHHHHhCCcceeecccCCCC
Confidence 566678999999999987535422 11 11 1 236666643 2 233333321 122110
Q ss_pred -----e-----------------ecCCeEEEEeccCCCHHHHHHHHHHHh
Q 001586 501 -----V-----------------VDSNTVTASFDETTTLEDVDKLFIVFA 528 (1049)
Q Consensus 501 -----~-----------------~~~~~vris~~~~~t~edid~lv~aL~ 528 (1049)
. +.++.||+|++.-+.++=|+.|.++|.
T Consensus 346 sl~~~~~~~~h~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~Al~ 395 (403)
T PRK07503 346 SLAQHPASMTHSTYTPEERAEHGISEGLVRLSVGLEDVADILADLAQALD 395 (403)
T ss_pred ccCcCCCCCccccCCHHHHHhcCCCCCeEEEEEecCCHHHHHHHHHHHHH
Confidence 0 124679999998776666677777775
No 332
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=99.60 E-value=2.5e-13 Score=155.67 Aligned_cols=283 Identities=19% Similarity=0.224 Sum_probs=188.5
Q ss_pred HHHHHHHHHhhC-CCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCEEEEEcCCCCC
Q 001586 635 NNLGEWLCTITG-FDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKG 713 (1049)
Q Consensus 635 ~el~~~la~l~G-~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~Vv~V~~d~~g 713 (1049)
.++++.+++.+| .+...+..+.|+... +-..++.+.. ++++|+++....+.+.-+++..|++++.|+.++ +
T Consensus 60 ~~l~~a~a~~~~~~~~~~V~~gnGsde~--i~~l~~~~~~-----~gd~vl~~~Ptf~~Y~~~a~~~g~~~~~v~~~~-~ 131 (356)
T COG0079 60 RELRAALAEYYGVVDPENVLVGNGSDEL--IELLVRAFVE-----PGDTVLIPEPTFSMYEIAAQLAGAEVVKVPLKE-F 131 (356)
T ss_pred HHHHHHHHHHhCCCCcceEEEcCChHHH--HHHHHHHhhc-----CCCEEEEcCCChHHHHHHHHhcCCeEEEecccc-c
Confidence 477888999999 665566666676533 3334555532 457899887766777777999999999999977 9
Q ss_pred CCCHHHHHHHHHhcCCCeEEEEEEcCC-ccccccccHHHHHHHHHHc--CCEEEEeccccccccCcCCCC-----ccCCc
Q 001586 714 NINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDN--GGQVYMDGANMNAQVGLTSPG-----YIGAD 785 (1049)
Q Consensus 714 ~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~~di~eI~~lah~~--G~ll~vD~A~~~a~~gl~~Pg-----~~GaD 785 (1049)
.+|++++.+.++ +++.+|++++|| .+|..- +.++|.+++... +++|+||+|+. -|..+. ...-+
T Consensus 132 ~~d~~~~~~~~~---~~~~lv~i~nPNNPTG~~~-~~~~l~~l~~~~~~~~~vVvDEAY~----eF~~~~~~~l~~~~~n 203 (356)
T COG0079 132 RLDLDAILAAIR---DKTKLVFLCNPNNPTGTLL-PREELRALLEALPEGGLVVIDEAYI----EFSPESSLELLKYPPN 203 (356)
T ss_pred ccCHHHHHHhhh---cCCCEEEEeCCCCCCCCCC-CHHHHHHHHHhCCCCcEEEEeCchh----hcCCchhhhhccCCCC
Confidence 999999999997 689999999996 599876 456666655543 88999999853 232221 11233
Q ss_pred EEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHch
Q 001586 786 VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGS 865 (1049)
Q Consensus 786 i~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~ 865 (1049)
++++ +||++-||..|-++|+...++++...+.- .+..-++++ ....++.+.+.. .
T Consensus 204 livl---RTfSKa~gLAGlRlGy~ia~~~~i~~l~~--------------vr~p~~v~~------~a~~aa~aal~~--~ 258 (356)
T COG0079 204 LIVL---RTFSKAFGLAGLRVGYAIANPELIAALNK--------------VRPPFNVSS------PALAAAIAALRD--A 258 (356)
T ss_pred EEEE---EecHHhhhcchhceeeccCCHHHHHHHHH--------------hcCCCCCCH------HHHHHHHHHccc--H
Confidence 6666 66666667778999998888776665420 000012221 111122222221 1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHHHCCcccCCCCC-C-CC
Q 001586 866 KGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSW-P-VP 942 (1049)
Q Consensus 866 eGl~~~~~~~~~~a~yL~~~L~~~-~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~-p-~~ 942 (1049)
+-+++..+.......+|.+.|+++ +.-+++.. .|=+.++++. +. ...+.+.|.++||.++.+.. + ..
T Consensus 259 ~~~~~~~~~~~~~r~rl~~~l~~~~~~~v~pS~----aNFvlv~~~~-----~~-~~~l~~~L~~~giivR~~~~~~~~~ 328 (356)
T COG0079 259 DYLEESVERIREERERLYAALKALGLFGVFPSQ----ANFVLVRVPD-----AE-AAALAEALLKKGILVRDCSSVGLLP 328 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCeecCCC----CcEEEEECCC-----cc-HHHHHHHHHHCCEEEEeCCCCCCCC
Confidence 334555666777788999999875 22123321 2224566541 23 56899999999999875532 2 35
Q ss_pred CEEEEEccCCCCHHHHHHHHHHHHHHHHH
Q 001586 943 GTLMIEPTESESKEELDRYCDALISIREE 971 (1049)
Q Consensus 943 ~~lri~~t~~~t~eeid~fv~aL~~i~~~ 971 (1049)
+++||++ -|.+|-|+|+++|+++.+.
T Consensus 329 ~~lRitv---gt~een~~ll~AL~~~~~~ 354 (356)
T COG0079 329 GYLRITV---GTPEENDRLLAALREVLKG 354 (356)
T ss_pred CeEEEEe---CCHHHHHHHHHHHHHHHhc
Confidence 7999998 5789999999999988643
No 333
>PRK07337 aminotransferase; Validated
Probab=99.60 E-value=1.7e-13 Score=160.06 Aligned_cols=302 Identities=14% Similarity=0.145 Sum_probs=178.2
Q ss_pred hcHHHHHHHHHHHHHHhhCCC--cccccc-CchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCEE
Q 001586 628 QGYQEMFNNLGEWLCTITGFD--SFSLQP-NAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKI 704 (1049)
Q Consensus 628 ~G~~~~i~el~~~la~l~G~~--~~~l~~-~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~V 704 (1049)
+|..++...+.+++....|.+ ...+.. +++++|.. ++++.+. .++++|+++...|..+...++..|.++
T Consensus 67 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~al~---~~~~~l~-----~~gd~Vlv~~p~y~~~~~~~~~~g~~~ 138 (388)
T PRK07337 67 LGLAPLREAIAAWYARRFGLDVAPERIVVTAGASAALL---LACLALV-----ERGDEVLMPDPSYPCNRHFVAAAEGRP 138 (388)
T ss_pred CCCHHHHHHHHHHHHHHhCCCCChHhEEEecCcHHHHH---HHHHHhc-----CCCCEEEEeCCCchhhHHHHHHcCCEE
Confidence 465566666666666656653 333333 34444442 2233321 256889999988877777788899999
Q ss_pred EEEcCCCC--CCCCHHHHHHHHHhcCCCeEEEEEEcCC-cccccc--ccHHHHHHHHHHcCCEEEEeccccc-cccC-cC
Q 001586 705 VSVGTDAK--GNINIEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMN-AQVG-LT 777 (1049)
Q Consensus 705 v~V~~d~~--g~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~--~di~eI~~lah~~G~ll~vD~A~~~-a~~g-l~ 777 (1049)
+.++.+.+ +.+|+++|+++++ +++++|++++|+ .+|.+- +++++|+++|+++|+++++|.++.. ...+ ..
T Consensus 139 ~~~~~~~~~~~~~~~~~l~~~~~---~~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~ 215 (388)
T PRK07337 139 VLVPSGPAERFQLTAADVEAAWG---ERTRGVLLASPSNPTGTSIAPDELRRIVEAVRARGGFTIVDEIYQGLSYDAAPV 215 (388)
T ss_pred EEeecCCccCCcCCHHHHHhhcC---ccceEEEEECCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCc
Confidence 99998743 5899999999987 788999999995 589764 2589999999999999999987531 1111 11
Q ss_pred CCCccCCcEE-EeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHH
Q 001586 778 SPGYIGADVC-HLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPIS 856 (1049)
Q Consensus 778 ~Pg~~GaDi~-~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a 856 (1049)
....++.+++ +.|++|.|++| |.++|++++.+++...+-.. ... ...+.+...+.. +
T Consensus 216 ~~~~~~~~vi~~~S~SK~~~~~----G~RiG~~~~~~~l~~~l~~~------------~~~--~~~~~s~~~q~~----~ 273 (388)
T PRK07337 216 SALSLGDDVITINSFSKYFNMT----GWRLGWLVVPEALVGTFEKL------------AQN--LFICASALAQHA----A 273 (388)
T ss_pred ChhhccCCEEEEEechhhcCCc----hhheeeeecCHHHHHHHHHH------------HHH--hccCCChHHHHH----H
Confidence 1123344554 56888988543 67799999887655443100 000 011111111111 1
Q ss_pred HHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHH-HHCCccc
Q 001586 857 YTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRL-MDYGFHG 934 (1049)
Q Consensus 857 ~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~-~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L-~~~Gi~~ 934 (1049)
..++..-+.+-+++..+...++.+++.+.|+++ +.+.. .+.+.. -+.++++.+.+....+..+++++| .++|+.+
T Consensus 274 ~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~-~p~~g~--f~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v 350 (388)
T PRK07337 274 LACFEPDTLAIYERRRAEFKRRRDFIVPALESLGFKVPV-MPDGAF--YVYADCRGVAHPAAGDSAALTQAMLHDAGVVL 350 (388)
T ss_pred HHHhccCchHHHHHHHHHHHHHHHHHHHHHHhcCCcccc-CCCeeE--EEEEecccccCCCCCCHHHHHHHHHHhCCEEE
Confidence 111211111224444455556778888888874 22211 122222 245666532111124567888775 5789986
Q ss_pred CC-CCCC---CCCEEEEEccCCCCHHHHHHHHHHHHH
Q 001586 935 PT-MSWP---VPGTLMIEPTESESKEELDRYCDALIS 967 (1049)
Q Consensus 935 ~~-~~~p---~~~~lri~~t~~~t~eeid~fv~aL~~ 967 (1049)
.. -.|. ..+++|+++.. +.++++..++.|.+
T Consensus 351 ~pg~~f~~~~~~~~~Ri~~~~--~~~~l~~~l~rl~~ 385 (388)
T PRK07337 351 VPGRDFGPHAPRDYIRLSYAT--SMSRLEEAVARLGK 385 (388)
T ss_pred eCchhhCCCCCCCEEEEEecC--CHHHHHHHHHHHHH
Confidence 42 2232 24799999985 46666666665554
No 334
>PRK12414 putative aminotransferase; Provisional
Probab=99.60 E-value=9.5e-14 Score=162.03 Aligned_cols=297 Identities=12% Similarity=0.111 Sum_probs=182.3
Q ss_pred hhcHHHHHHHHHHHHHHhhCCCc---c-ccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCC
Q 001586 627 AQGYQEMFNNLGEWLCTITGFDS---F-SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGM 702 (1049)
Q Consensus 627 ~~G~~~~i~el~~~la~l~G~~~---~-~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~ 702 (1049)
.+|..++.+++++++++++|.+. . .+..+++++|...+ ++.+. .++++|+++...|......++..|.
T Consensus 65 ~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~it~g~~~al~~~---~~~l~-----~~gd~Vlv~~p~y~~~~~~~~~~g~ 136 (384)
T PRK12414 65 MAGIAALREALAEKTERLYGARYDPASEVTVIASASEGLYAA---ISALV-----HPGDEVIYFEPSFDSYAPIVRLQGA 136 (384)
T ss_pred CCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEECChHHHHHHH---HHHhc-----CCCCEEEEeCCCccchHHHHHHcCC
Confidence 35778888899999999999852 2 23445555554333 33321 2568899988877666666788999
Q ss_pred EEEEEcCCC-CCCCCHHHHHHHHHhcCCCeEEEEEEcCC-cccccc--ccHHHHHHHHHHcCCEEEEeccccc-cccC-c
Q 001586 703 KIVSVGTDA-KGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMN-AQVG-L 776 (1049)
Q Consensus 703 ~Vv~V~~d~-~g~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~--~di~eI~~lah~~G~ll~vD~A~~~-a~~g-l 776 (1049)
+++.++.++ ++.+|+++|+++++ +++++|++++|+ .+|.+- .++++|+++|+++|+++++|+++.. .+.+ .
T Consensus 137 ~~~~v~~~~~~~~~d~~~l~~~l~---~~~~~v~i~~p~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~ 213 (384)
T PRK12414 137 TPVAIKLSPEDFRVNWDEVAAAIT---PRTRMIIVNTPHNPSATVFSAADLARLAQLTRNTDIVILSDEVYEHVVFDGAR 213 (384)
T ss_pred EEEEEecCccccccCHHHHHhhcC---cccEEEEEcCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEhhhhhhccCCCCC
Confidence 999999875 46799999999996 688999999995 589862 3699999999999999999998642 1111 0
Q ss_pred CCC-Cc----cCCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHH
Q 001586 777 TSP-GY----IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSAL 851 (1049)
Q Consensus 777 ~~P-g~----~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~ 851 (1049)
..| .. .+--+++.|++|.|++| |-++|++++++++...+... ......+.+...+.
T Consensus 214 ~~~~~~~~~~~~~~i~~~SfSK~~~~p----GlRiG~~v~~~~l~~~l~~~--------------~~~~~~~~s~~~q~- 274 (384)
T PRK12414 214 HHSMARHRELAERSVIVSSFGKSYHVT----GWRVGYCLAPAELMDEIRKV--------------HQFMVFSADTPMQH- 274 (384)
T ss_pred ccCcccCcCccCcEEEEecccccccCc----cceEEEEecCHHHHHHHHHH--------------HhheecCCCcHHHH-
Confidence 011 11 11237788888988544 67889999887765443210 00011111111111
Q ss_pred HHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeEEEEeccCccccCCCCHHHHH-HHHHH
Q 001586 852 ILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVA-KRLMD 929 (1049)
Q Consensus 852 ~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~-~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~-k~L~~ 929 (1049)
++..++.. + +.+.+..+...++.+++.+.|+++ +.+ + .+.+.++ ++++++... +.+..+++ +.|.+
T Consensus 275 ---a~~~~l~~-~-~~~~~~~~~~~~~r~~l~~~L~~~g~~~-~-~~~gg~~--~~~~~~~~~---~~~~~~~~~~~l~~ 342 (384)
T PRK12414 275 ---AFAEALAE-P-ASYLGLGAFYQRKRDLLARELAGSRFEL-L-PSEGSFF--MLARFRHFS---DESDSDFVLRLIRD 342 (384)
T ss_pred ---HHHHHhcC-C-hHHHHHHHHHHHHHHHHHHHHHhCCCee-c-CCCcceE--EEEcccccC---CCCHHHHHHHHHHh
Confidence 11222211 1 223334445556778888888875 332 2 2223232 334554211 12344556 55667
Q ss_pred CCcccCC-CCCC---C-CCEEEEEccCCCCHHHHHHHHHHHHH
Q 001586 930 YGFHGPT-MSWP---V-PGTLMIEPTESESKEELDRYCDALIS 967 (1049)
Q Consensus 930 ~Gi~~~~-~~~p---~-~~~lri~~t~~~t~eeid~fv~aL~~ 967 (1049)
+||.+.. ..|. . .+++||++.. ++++++..++.|.+
T Consensus 343 ~gV~v~pg~~f~~~~~~~~~iRis~~~--~~~~~~~~~~rl~~ 383 (384)
T PRK12414 343 ARVATIPLSAFYTDGTDTGLIRLSFSK--DDATLVEGARRLCS 383 (384)
T ss_pred CCEEEecchhhcCCCCCCCEEEEEecC--CHHHHHHHHHHHhh
Confidence 8998643 2232 1 4789999984 57777777776653
No 335
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.60 E-value=2.9e-13 Score=157.57 Aligned_cols=212 Identities=22% Similarity=0.208 Sum_probs=149.6
Q ss_pred HHHHHHHHHHHhCCCCcceEeccchHHHHHHHHHHhhhccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc--ch
Q 001586 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--KD 290 (1049)
Q Consensus 213 l~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a~~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~~--~~ 290 (1049)
..++++.+|++.|.+. +.++.+|++++.++++++ .. +||+||++...|+++...++.+ +..|++++++++ ++
T Consensus 55 ~~~lE~~lA~l~g~~~--~l~~~sG~~Ai~~~l~~l-l~--~GD~Vlv~~~~y~~~~~~~~~~-~~~g~~v~~~~~d~~~ 128 (385)
T PRK08574 55 LRPLEEALAKLEGGVD--ALAFNSGMAAISTLFFSL-LK--AGDRVVLPMEAYGTTLRLLKSL-EKFGVKVVLAYPSTED 128 (385)
T ss_pred HHHHHHHHHHHhCCCc--EEEeCCHHHHHHHHHHHH-hC--CCCEEEEcCCCchhHHHHHHHh-hccCcEEEEECCCHHH
Confidence 3457789999999864 667889998877766654 23 8999999999999999888764 678999887654 56
Q ss_pred hhc-cCC-CEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCCC
Q 001586 291 IDY-KSG-DVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYG 366 (1049)
Q Consensus 291 l~~-l~~-~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~p~~~GaDivvgs~-k~lg~P~~~G 366 (1049)
+++ +++ +|++|++.+| |++|.+.|+++|+++||++|++++|+ +.++.+....|.++|+|++++|. |.|++| |
T Consensus 129 l~~~i~~~~tklV~ie~p~NPtG~v~dl~~I~~la~~~gi~livD-~t~a~~~~~~~l~~GaDivv~S~sK~l~g~---~ 204 (385)
T PRK08574 129 IIEAIKEGRTKLVFIETMTNPTLKVIDVPEVAKAAKELGAILVVD-NTFATPLLYRPLRHGADFVVHSLTKYIAGH---N 204 (385)
T ss_pred HHHhcCccCceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEE-CCCCccccCChhhhCCcEEEeeCceeecCC---C
Confidence 666 777 8999999987 79999999999999999999999994 45666666667789999999998 777543 1
Q ss_pred CCceEEEEE-chhHHhcCCCceeeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcchHHH
Q 001586 367 GPHAAFLAT-SQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKT 445 (1049)
Q Consensus 367 GP~~G~l~~-~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irrekaTsni~t~~~l~a~~aa~y~~~~g~~Gl~~ 445 (1049)
..-+|.+.+ ++++..++- ..|+..|+ .. +++ .| |+...+-+-+..
T Consensus 205 d~~gG~vi~~~~~~~~~~~-------------------------~~~~~~g~-~~---~p~---~a--~l~l~~l~tL~~ 250 (385)
T PRK08574 205 DVVGGVAVAWSGEFLEELW-------------------------EWRRRLGT-IM---QPF---EA--YLVLRGLKTLEV 250 (385)
T ss_pred CceeEEEEECcHHHHHHHH-------------------------HHHHhcCC-CC---CHH---HH--HHHHcccCcHHH
Confidence 122454444 444443320 00111111 00 121 11 224445555666
Q ss_pred HHHHHHHHHHHHHHHhhcCCCeE
Q 001586 446 IAQRVHGLAGTFALGLKKLGTVE 468 (1049)
Q Consensus 446 ia~~~~~~a~~l~~~L~~~g~~~ 468 (1049)
..++..+++.++++.|++...++
T Consensus 251 R~~~~~~na~~la~~L~~~p~v~ 273 (385)
T PRK08574 251 RFERQCRNAMAIAEFLSEHPKVA 273 (385)
T ss_pred HHHHHHHHHHHHHHHHHcCCCcC
Confidence 66777889999999999875453
No 336
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=99.59 E-value=4.4e-13 Score=152.31 Aligned_cols=291 Identities=18% Similarity=0.275 Sum_probs=189.5
Q ss_pred HHHHHHHHHHHhhCC-CccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEE-EcCCCCCccHHHHHhc----------
Q 001586 633 MFNNLGEWLCTITGF-DSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMC---------- 700 (1049)
Q Consensus 633 ~i~el~~~la~l~G~-~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VL-ip~saHg~~pa~a~~~---------- 700 (1049)
..-++.++++++++. +.+. +.|||++++.++++.+|+| ++|++|+ ...++||.+.......
T Consensus 94 ~Ei~~Aell~~~~p~~e~vr-fvnSGTEAtmsAiRlARa~------TgR~kIikF~G~YHG~~D~~lv~agsg~~t~g~p 166 (432)
T COG0001 94 LEVELAELLIERVPSIEKVR-FVNSGTEATMSAIRLARAY------TGRDKIIKFEGCYHGHSDSLLVKAGSGAATLGSP 166 (432)
T ss_pred HHHHHHHHHHHhcCcccEEE-EecchhHHHHHHHHHHHHh------hCCCeEEEEcCCCCCCccHHHhhcCcCcccCCCC
Confidence 345788899999887 5543 4789998887777777766 4688888 6889999887763321
Q ss_pred ---CC------EEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-Cccccccc---cHHHHHHHHHHcCCEEEEec
Q 001586 701 ---GM------KIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDG 767 (1049)
Q Consensus 701 ---G~------~Vv~V~~d~~g~iD~~~L~~~i~~~~~~taaV~it~P-n~~G~i~~---di~eI~~lah~~G~ll~vD~ 767 (1049)
|+ .+..+|+ .|++.++++++++.+++++|+++.. +..|++.| .+++|.++|+++|+++|+|+
T Consensus 167 ~s~Gvp~~~a~~ti~~~y-----ND~~al~~~~~~~g~~IAaVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DE 241 (432)
T COG0001 167 SSPGVPADVAKHTLVLPY-----NDLEALEEAFEEYGDDIAAVIVEPVAGNMGVVPPEPGFLEGLRELTEEHGALLIFDE 241 (432)
T ss_pred CCCCCChhhhccEEEecC-----CCHHHHHHHHHHcCCcEEEEEeccccCCCCCCCCCHHHHHHHHHHHHHcCcEEEEec
Confidence 12 3556666 5999999999988899999988764 56898863 48999999999999999998
Q ss_pred cccccccCcCCC-C----c--cCCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCC-CCccccCCCCCCCCCCCCC
Q 001586 768 ANMNAQVGLTSP-G----Y--IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLP-SHPVVSTGGIPAPEKSQPL 839 (1049)
Q Consensus 768 A~~~a~~gl~~P-g----~--~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp-g~~vg~t~~~~~~~~~~~t 839 (1049)
+ ..|+..+ | . .-+|+.++ .|.++ ||-.+|.+..++++++.+- ...+.. .
T Consensus 242 V----iTGFR~~~gGaq~~~gi~PDlttl--GKiIG-----GGlP~ga~gGr~eiM~~~~p~g~vyq------------a 298 (432)
T COG0001 242 V----ITGFRVALGGAQGYYGVEPDLTTL--GKIIG-----GGLPIGAFGGRAEIMEQLAPLGPVYQ------------A 298 (432)
T ss_pred c----hhhcccCCcccccccCcCcchhhh--hhhhc-----CCcceeeeccHHHHHhhhCCCCCccc------------c
Confidence 6 3444322 1 1 24688766 57763 6667888899998887653 221211 1
Q ss_pred CCCCccchhhHHHHHHHHHHHHHHch-hh-HHHHHHHHHHHHHHHHHHHhcc-----CCeeeccCCCceeeEEEEec-cC
Q 001586 840 GTIAAAPWGSALILPISYTYIAMMGS-KG-LTEASKIAILNANYMAKRLEKH-----YPILFRGVNGTVAHEFIVDL-RG 911 (1049)
Q Consensus 840 ~~i~sa~~g~~~~~~~a~a~l~~lG~-eG-l~~~~~~~~~~a~yL~~~L~~~-----~~v~~~g~~g~~~~e~iv~~-~~ 911 (1049)
+ ++.|+++.+++..+.+..+-. ++ ++ +...+++.|++.|++. +++...+ .+..+ .+.|.- +.
T Consensus 299 G----T~sgnplamaAG~atl~~l~~~~~~y~----~l~~~~~~L~~gl~~~~~~~g~~~~v~~-~gsm~-~i~F~~~~~ 368 (432)
T COG0001 299 G----TLSGNPLAMAAGLATLEELMTEEGVYE----RLDALGERLAEGLRAAAERHGIPLTVNR-VGSMF-GIFFTEEGV 368 (432)
T ss_pred C----CCCCcHHHHHHHHHHHHHHHhcccHHH----HHHHHHHHHHHHHHHHHHHhCCCeEEee-ecceE-EEEecCCCC
Confidence 2 234577777777888877765 34 33 3335666777777653 3332221 12222 222221 11
Q ss_pred --ccc--cCCCC-HHHHHHHHHHCCcccCCCCCCCCCEEEEEccCCCCHHHHHHHHHHHHHHHHHHH
Q 001586 912 --LKN--TAGIE-PEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIA 973 (1049)
Q Consensus 912 --~~~--~~g~~-~~~v~k~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~eeid~fv~aL~~i~~~i~ 973 (1049)
+.. ..+.+ ...+.+.|.++|++.+...| ...-+|. .+|++|||++++++.++.+++.
T Consensus 369 ~n~~da~~sd~~~~~~~~~~~l~~GV~l~ps~~---ea~flS~--ahte~di~~~~~a~~~~~~~~~ 430 (432)
T COG0001 369 RNYADAKRSDVERFAKFFHHLLNRGVYLAPSQF---EAGFLST--AHTEEDIDRTLEAADEAFKELA 430 (432)
T ss_pred CCHHHHHhhchHHHHHHHHHHHhCCcccCCccc---cceeeec--ccCHHHHHHHHHHHHHHHHHhh
Confidence 100 01111 23455678899999864332 2333433 4789999999999998877654
No 337
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.59 E-value=4.9e-14 Score=164.02 Aligned_cols=279 Identities=17% Similarity=0.211 Sum_probs=182.7
Q ss_pred HHHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHH----HHHhcCCEEEEEcC
Q 001586 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA----TAAMCGMKIVSVGT 709 (1049)
Q Consensus 634 i~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa----~a~~~G~~Vv~V~~ 709 (1049)
..++++.++++.|.+.+ +..++|+.+..++++++. +++++||++...|+.... .+...|++++.++.
T Consensus 56 ~~~le~~la~l~g~~~~-~~~~sG~~Ai~~al~al~--------~~Gd~Vl~~~~~~~~t~~~~~~~~~~~g~~v~~v~~ 126 (380)
T TIGR01325 56 VAAFEERIAALEGAERA-VATATGMSAIQAALMTLL--------QAGDHVVASRSLFGSTVGFISEILPRFGIEVSFVDP 126 (380)
T ss_pred HHHHHHHHHHHhCCCcE-EEECCHHHHHHHHHHHHh--------CCCCEEEEecCCcchHHHHHHHHHHHhCCEEEEECC
Confidence 45788999999998764 556778777765554432 246789998887765432 35668999999987
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-ccccccccHHHHHHHHHHcCCEEEEeccccccccCcCCCCccCCcEEE
Q 001586 710 DAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1049)
Q Consensus 710 d~~g~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~Pg~~GaDi~~ 788 (1049)
+ |+++++++++ +++++|++++|+ .+|.+. |+++|+++||++|++++||+++... ....|.+.|+|+++
T Consensus 127 ~-----d~~~l~~~i~---~~tklV~le~p~np~g~~~-dl~~I~~la~~~gi~livD~a~~~~--~~~~pl~~g~Divv 195 (380)
T TIGR01325 127 T-----DLNAWEAAVK---PNTKLVFVETPSNPLGELV-DIAALAELAHAIGALLVVDNVFATP--VLQQPLKLGADVVV 195 (380)
T ss_pred C-----CHHHHHHhcC---CCceEEEEECCCCCCCeee-CHHHHHHHHHHcCCEEEEECCCccc--ccCCchhhCCCEEE
Confidence 3 7999999886 789999999995 589887 8999999999999999999986422 23456678999999
Q ss_pred eCCCcccccCCCCCCCc---eeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHch
Q 001586 789 LNLHKTFCIPHGGGGPG---MGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGS 865 (1049)
Q Consensus 789 ~s~hK~f~~P~g~GGPg---~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~ 865 (1049)
.|++|+|+ |+| +|+++.++++...+... . ...+...+ ++ .+| +...|.
T Consensus 196 ~S~sK~l~------g~g~~~gG~vv~~~~~~~~l~~~------------~-~~~g~~~~-p~-------~a~--~~l~~l 246 (380)
T TIGR01325 196 YSATKHID------GQGRVMGGVIAGSEELMAEVAVY------------L-RHTGPAMS-PF-------NAW--VLLKGL 246 (380)
T ss_pred eeccceec------CCCCeEEEEEEeCHHHHHHHHHH------------H-HhhCCCCC-HH-------HHH--HHHhcc
Confidence 99999985 332 47777776554432100 0 00111111 11 122 334456
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhccCC---eeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHHHCCcccCCCCCCCC
Q 001586 866 KGLTEASKIAILNANYMAKRLEKHYP---ILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVP 942 (1049)
Q Consensus 866 eGl~~~~~~~~~~a~yL~~~L~~~~~---v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~p~~ 942 (1049)
+.+..+.++..+++.++.+.|+++.. |.|++. + ..+..+++++.. .| + +
T Consensus 247 ~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~yp~l------------~------s~~~~~~~~~~~-~g-------~--g 298 (380)
T TIGR01325 247 ETLSLRMQKQFDSALAIAEWLQAQPQVQAVYYPGL------------P------DHPQHELARRQQ-SG-------G--G 298 (380)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCC------------C------CCccHHHHHhhC-CC-------C--c
Confidence 66777788888999999999987632 333321 0 123355666532 12 1 2
Q ss_pred CEEEEEccCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCccccccchh
Q 001586 943 GTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKVTCLFLHHGYF 999 (1049)
Q Consensus 943 ~~lri~~t~~~t~eeid~fv~aL~~i~~~i~~i~~g~~~~~~~~l~~~ph~~~~~~~ 999 (1049)
+ ++++... +.+...+|++.|+-+. ...+ -++...|...|.++.++++
T Consensus 299 ~--~~s~~l~-~~~~~~~f~~~l~~~~-~~~s------~G~~~sl~~~p~~~~~~~~ 345 (380)
T TIGR01325 299 T--VIGFDVA-DRAAAWKVLDAVELVS-ITNN------LGDAKSTITHPATTTHGRM 345 (380)
T ss_pred e--EEEEEEC-CHHHHHHHHHcCCcce-Eccc------CCCCCeeeeCCCccCcccC
Confidence 3 3344433 6788889999887431 1111 2245666677777766544
No 338
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.59 E-value=1.8e-13 Score=149.97 Aligned_cols=140 Identities=26% Similarity=0.267 Sum_probs=113.2
Q ss_pred HHHHHHHHhCCCCcceEeccchHHHHHHHHHHhhhccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCcchh---h
Q 001586 216 FQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKDI---D 292 (1049)
Q Consensus 216 ~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a~~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~~~~l---~ 292 (1049)
+++.||.|-|.-. +.-+.+|.|+...+++.+. +.||+||.+...+..+...+....+.+||+++++|.++. +
T Consensus 67 lE~RiAaLEGG~a--a~a~aSG~AA~~~ai~~la---~aGD~iVss~~LYGGT~~lf~~tl~~~Gi~v~fvd~~d~~~~~ 141 (426)
T COG2873 67 LEERIAALEGGVA--ALAVASGQAAITYAILNLA---GAGDNIVSSSKLYGGTYNLFSHTLKRLGIEVRFVDPDDPENFE 141 (426)
T ss_pred HHHHHHHhhcchh--hhhhccchHHHHHHHHHhc---cCCCeeEeeccccCchHHHHHHHHHhcCcEEEEeCCCCHHHHH
Confidence 4478999988643 2233455555443333321 389999999999999998887777899999999987654 4
Q ss_pred c-cCCCEeEEEEEc-CCCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccc
Q 001586 293 Y-KSGDVCGVLVQY-PGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGV 361 (1049)
Q Consensus 293 ~-l~~~t~~V~v~~-pn~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~p~~~GaDivvgs~-k~lg~ 361 (1049)
+ ++++|++|+++. .|+-+.|.|+++|+++||++|++++|+ +.++.+.+..|-+.|||||+.|. |++|+
T Consensus 142 ~aI~~nTkavf~EtigNP~~~v~Die~ia~iAh~~gvpliVD-NT~atpyl~rP~~hGADIVvHS~TK~igG 212 (426)
T COG2873 142 AAIDENTKAVFAETIGNPGLDVLDIEAIAEIAHRHGVPLIVD-NTFATPYLCRPIEHGADIVVHSATKYIGG 212 (426)
T ss_pred HHhCcccceEEEEeccCCCccccCHHHHHHHHHHcCCcEEEe-cCCCcceecchhhcCCCEEEEeecccccC
Confidence 4 899999999976 699999999999999999999999994 67787888999999999999998 76664
No 339
>PRK08912 hypothetical protein; Provisional
Probab=99.59 E-value=2.5e-13 Score=158.65 Aligned_cols=300 Identities=16% Similarity=0.133 Sum_probs=182.5
Q ss_pred hcHHHHHHHHHHHHHHhhCCC--cc-ccc-cCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCE
Q 001586 628 QGYQEMFNNLGEWLCTITGFD--SF-SLQ-PNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMK 703 (1049)
Q Consensus 628 ~G~~~~i~el~~~la~l~G~~--~~-~l~-~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~ 703 (1049)
+|..++.+.+.+++.+..|.+ .. .+. .+++++|... +++.+. .++++|+++...|+.+...++..|.+
T Consensus 63 ~G~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~---~~~~~~-----~~gd~Vlv~~p~y~~~~~~~~~~g~~ 134 (387)
T PRK08912 63 MGLPELRQAVAAHYARFQGLDLDPETEVMVTSGATEALAA---ALLALV-----EPGDEVVLFQPLYDAYLPLIRRAGGV 134 (387)
T ss_pred CCcHHHHHHHHHHHHHHhCCCCCCcccEEEeCCcHHHHHH---HHHHhc-----CCCCEEEEeCCCchhhHHHHHHcCCE
Confidence 566666666666776666653 32 343 4444444432 233221 25688999988777776778899999
Q ss_pred EEEEcCCC-CCCCCHHHHHHHHHhcCCCeEEEEEEcCC-cccccc--ccHHHHHHHHHHcCCEEEEecccccc-ccC---
Q 001586 704 IVSVGTDA-KGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMNA-QVG--- 775 (1049)
Q Consensus 704 Vv~V~~d~-~g~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~--~di~eI~~lah~~G~ll~vD~A~~~a-~~g--- 775 (1049)
++.+++++ ++.+|+++|+++++ +++++|++++|+ .+|.+- +++++|+++|+++|+++++|.++..- ..+
T Consensus 135 ~~~~~~~~~~~~~~~~~l~~~~~---~~~~~v~l~~p~NPtG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~ 211 (387)
T PRK08912 135 PRLVRLEPPHWRLPRAALAAAFS---PRTKAVLLNNPLNPAGKVFPREELALLAEFCQRHDAVAICDEVWEHVVFDGRRH 211 (387)
T ss_pred EEEEecCcccCcCCHHHHHHHhC---ccceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCeEEEEhhhhhhcccCCCCC
Confidence 99999865 57899999999986 688899999995 589774 25888999999999999999986311 111
Q ss_pred --cC-CCCccCCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHH
Q 001586 776 --LT-SPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALI 852 (1049)
Q Consensus 776 --l~-~Pg~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~ 852 (1049)
+. .++..+.++++.+++|.|++| |.++|++++++++...+... ......+.+ +..+.
T Consensus 212 ~~~~~~~~~~~~~i~~~S~SK~~g~~----GlRiG~~~~~~~~~~~l~~~------------~~~~~~~~~--~~~q~-- 271 (387)
T PRK08912 212 IPLMTLPGMRERTVKIGSAGKIFSLT----GWKVGFVCAAPPLLRVLAKA------------HQFLTFTTP--PNLQA-- 271 (387)
T ss_pred cChhhCCCccCceEEEeechhhccCc----CceeEEEecCHHHHHHHHHH------------HhhccccCC--hHHHH--
Confidence 10 112224568889999988543 67799999887655443100 000000111 11111
Q ss_pred HHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHH-HC
Q 001586 853 LPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-DY 930 (1049)
Q Consensus 853 ~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~-~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~-~~ 930 (1049)
++..++. -..+-+++..+...++.+++.+.|++. +.+. .+.+.++ +.++++... ...+..+++++|. ++
T Consensus 272 --~~~~~l~-~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~--~~~g~~~--l~~~l~~~~--~~~~~~~~~~~l~~~~ 342 (387)
T PRK08912 272 --AVAYGLG-KPDDYFEGMRADLARSRDRLAAGLRRIGFPVL--PSQGTYF--LTVDLAPLG--LAEDDVAFCRRLVEEA 342 (387)
T ss_pred --HHHHHHh-CCHHHHHHHHHHHHHHHHHHHHHHHhCCCccc--CCCcceE--EEecccccC--CCCCHHHHHHHHHhcC
Confidence 1112221 112223344455667788898999875 3332 2223222 334553210 0245678898875 57
Q ss_pred CcccCC-CCC----CCCCEEEEEccCCCCHHHHHHHHHHHHHHH
Q 001586 931 GFHGPT-MSW----PVPGTLMIEPTESESKEELDRYCDALISIR 969 (1049)
Q Consensus 931 Gi~~~~-~~~----p~~~~lri~~t~~~t~eeid~fv~aL~~i~ 969 (1049)
|+.+.. ..| +..+++|+++.. ..++++..++.|.+.+
T Consensus 343 gV~v~pg~~f~~~~~~~~~iRl~~~~--~~~~l~~~l~rl~~~l 384 (387)
T PRK08912 343 GVAAIPVSAFYEEDPVTSVVRFCFAK--RDATLDEAVERLAAAR 384 (387)
T ss_pred CEEEecchhhCCCCCCCCEEEEEEeC--CHHHHHHHHHHHHHHH
Confidence 997642 223 235899999985 4677777777776543
No 340
>PRK08960 hypothetical protein; Provisional
Probab=99.59 E-value=3.1e-13 Score=157.90 Aligned_cols=296 Identities=11% Similarity=0.092 Sum_probs=173.4
Q ss_pred hcHHHHHHHHHHHHHHhhCCC--ccccccCc-hHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCEE
Q 001586 628 QGYQEMFNNLGEWLCTITGFD--SFSLQPNA-GAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKI 704 (1049)
Q Consensus 628 ~G~~~~i~el~~~la~l~G~~--~~~l~~~s-Ga~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~V 704 (1049)
+|..++.+.+.+++.+.+|.+ ...+..++ +++|.. ++++.+. .++++|+++...|..+...+...|.++
T Consensus 69 ~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~---~~~~~~~-----~~gd~vlv~~p~y~~~~~~~~~~g~~~ 140 (387)
T PRK08960 69 RGLPALREAIAGFYAQRYGVDVDPERILVTPGGSGALL---LASSLLV-----DPGKHWLLADPGYPCNRHFLRLVEGAA 140 (387)
T ss_pred CCCHHHHHHHHHHHHHHhCCCCChhhEEEccCcHHHHH---HHHHHhc-----CCCCEEEEcCCCCcchHHHHHhcCCeE
Confidence 566565656666666555643 33444444 444442 3333331 256899999988888887888899999
Q ss_pred EEEcCCCC--CCCCHHHHHHHHHhcCCCeEEEEEEcC-Ccccccc--ccHHHHHHHHHHcCCEEEEecccccc-ccC-cC
Q 001586 705 VSVGTDAK--GNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNA-QVG-LT 777 (1049)
Q Consensus 705 v~V~~d~~--g~iD~~~L~~~i~~~~~~taaV~it~P-n~~G~i~--~di~eI~~lah~~G~ll~vD~A~~~a-~~g-l~ 777 (1049)
+.++++.+ +.+|+++++++++ ++++++++++| |.+|..- +++++|+++|+++|+++++|.++..- ... ..
T Consensus 141 ~~v~~~~~~~~~~d~~~l~~~~~---~~~~~i~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~~~~~ 217 (387)
T PRK08960 141 QLVPVGPDSRYQLTPALVERHWN---ADTVGALVASPANPTGTLLSRDELAALSQALRARGGHLVVDEIYHGLTYGVDAA 217 (387)
T ss_pred EEEecCcccCCCCCHHHHHHHhC---ccceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCC
Confidence 99998765 3799999999887 67888999999 5699875 24788888999999999999975321 111 00
Q ss_pred CCCccCCc-EEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHH
Q 001586 778 SPGYIGAD-VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPIS 856 (1049)
Q Consensus 778 ~Pg~~GaD-i~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a 856 (1049)
+......+ +++.|++|.|+.| |-++|++++++++.+.+..- . .....+.+...+. ++
T Consensus 218 ~~~~~~~~vi~~~S~SK~~g~~----GlRiG~~~~~~~~~~~~~~~------------~--~~~~~~~s~~~q~----a~ 275 (387)
T PRK08960 218 SVLEVDDDAFVLNSFSKYFGMT----GWRLGWLVAPPAAVPELEKL------------A--QNLYISASTPAQH----AA 275 (387)
T ss_pred ChhhccCCEEEEeecccccCCc----ccEEEEEEcCHHHHHHHHHH------------H--hhhccCCCHHHHH----HH
Confidence 11122234 5667788887533 56799999987765543100 0 0011111111121 12
Q ss_pred HHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHH-HCCccc
Q 001586 857 YTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-DYGFHG 934 (1049)
Q Consensus 857 ~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~-~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~-~~Gi~~ 934 (1049)
.+.+.....+-+.+..+...++.+.+.+.|+++ +.+.. .+.+..+ +.++++.+ +.+..+++++|. ++||.+
T Consensus 276 ~~~l~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~-~p~g~~f--~~~~~~~~----~~~~~~~~~~ll~~~gi~v 348 (387)
T PRK08960 276 LACFEPETLAILEARRAEFARRRDFLLPALRELGFGIAV-EPQGAFY--LYADISAF----GGDAFAFCRHFLETEHVAF 348 (387)
T ss_pred HHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCc-CCCeeEE--EEEecccc----CCCHHHHHHHHHHhCCEEE
Confidence 222221111223334444556677888888774 33211 1222222 34565421 245678888865 689986
Q ss_pred CC-CCCC---CCCEEEEEccCCCCHHHHHHHHHHHHHH
Q 001586 935 PT-MSWP---VPGTLMIEPTESESKEELDRYCDALISI 968 (1049)
Q Consensus 935 ~~-~~~p---~~~~lri~~t~~~t~eeid~fv~aL~~i 968 (1049)
.. ..|. ..+++|++++. +.+ ++.++++.+
T Consensus 349 ~pg~~f~~~~~~~~iRi~~~~--~~~---~l~~al~~l 381 (387)
T PRK08960 349 TPGLDFGRHQAGQHVRFAYTQ--SLP---RLQEAVERI 381 (387)
T ss_pred cCchHhCCCCCCCeEEEEecC--CHH---HHHHHHHHH
Confidence 42 2232 24689999984 344 444444444
No 341
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.59 E-value=3.3e-14 Score=165.88 Aligned_cols=281 Identities=20% Similarity=0.241 Sum_probs=179.3
Q ss_pred HHHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHH----HHHhcCCEEEEEcC
Q 001586 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA----TAAMCGMKIVSVGT 709 (1049)
Q Consensus 634 i~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa----~a~~~G~~Vv~V~~ 709 (1049)
..++++.+++++|.+.+ +..++|.+|..++++++. +++++||++...|+.... .+...|++++.++.
T Consensus 63 ~~~le~~la~l~g~~~~-v~~ssG~~Ai~~al~al~--------~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~v~~vd~ 133 (390)
T PRK08133 63 VTMFQERLAALEGAEAC-VATASGMAAILAVVMALL--------QAGDHVVSSRSLFGSTVSLFEKIFARFGIETTFVDL 133 (390)
T ss_pred HHHHHHHHHHHhCCCcE-EEECCHHHHHHHHHHHHh--------CCCCEEEEccCcchhHHHHHHHHHHHcCcEEEEECC
Confidence 45789999999998764 556677776654444331 256889998877765433 24568999999987
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-ccccccccHHHHHHHHHHcCCEEEEeccccccccCcCCCCccCCcEEE
Q 001586 710 DAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1049)
Q Consensus 710 d~~g~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~Pg~~GaDi~~ 788 (1049)
+ |+++++++++ ++|++|++++|+ .+|.+. |+++|+++||++|+++++|+++. ...+..|.+.|+|+++
T Consensus 134 ~-----d~~~l~~~i~---~~tklV~ie~p~NptG~v~-dl~~I~~la~~~gi~livD~t~~--~~~~~~pl~~g~Divv 202 (390)
T PRK08133 134 T-----DLDAWRAAVR---PNTKLFFLETPSNPLTELA-DIAALAEIAHAAGALLVVDNCFC--TPALQQPLKLGADVVI 202 (390)
T ss_pred C-----CHHHHHHhcC---cCCeEEEEECCCCCCCCcC-CHHHHHHHHHHcCCEEEEECCCc--ccccCCchhhCCcEEE
Confidence 3 8999999997 789999999995 699987 89999999999999999999853 2233567778999999
Q ss_pred eCCCcccccCCCCCCCce-eEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhh
Q 001586 789 LNLHKTFCIPHGGGGPGM-GPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (1049)
Q Consensus 789 ~s~hK~f~~P~g~GGPg~-G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eG 867 (1049)
.|+||+++. .|..+ |+++.++++...+... . + ..+...+ ++ .+| +...|.+.
T Consensus 203 ~S~sK~~~g----~g~~~GG~vv~~~~~~~~~~~~-~----------~--~~g~~~~-~~-------~a~--~~l~gl~t 255 (390)
T PRK08133 203 HSATKYLDG----QGRVLGGAVVGSKELMEEVFGF-L----------R--TAGPTLS-PF-------NAW--VFLKGLET 255 (390)
T ss_pred eecceeecC----CcceEeEEEEcCHHHHHHHHHH-H----------H--HhCCCCC-HH-------HHH--HHHcccch
Confidence 999999851 12223 7777766543322100 0 0 0111111 11 133 33445566
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCe---eeccCCCceeeEEEEeccCccccCCCCHHHHHHHHHHCCcccCCCCCCCCCE
Q 001586 868 LTEASKIAILNANYMAKRLEKHYPI---LFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGT 944 (1049)
Q Consensus 868 l~~~~~~~~~~a~yL~~~L~~~~~v---~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~p~~~~ 944 (1049)
+..+.++..+++..+++.|+++..+ .|++. . ..+..+++++.. .|+ ++
T Consensus 256 l~~R~~~~~~~a~~la~~L~~~p~v~~v~yp~l------------~------~~p~~~~~~~~~-~g~---------g~- 306 (390)
T PRK08133 256 LSLRMEAHSANALALAEWLEAHPGVERVFYPGL------------P------SHPQHELAKRQQ-KGG---------GA- 306 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCC------------C------CCccHHHHHHhC-CCC---------ce-
Confidence 7778888889999999999876332 22221 0 123345665532 221 23
Q ss_pred EEEEccCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCccccccch
Q 001586 945 LMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKVTCLFLHHGY 998 (1049)
Q Consensus 945 lri~~t~~~t~eeid~fv~aL~~i~~~i~~i~~g~~~~~~~~l~~~ph~~~~~~ 998 (1049)
++++....+.++..+|++.|+-+ ....++ | +.+.+...|-++.+++
T Consensus 307 -~~s~~l~~~~~~~~~f~~~l~l~-~~~~sl--G----~~~sl~~~p~~~~~~~ 352 (390)
T PRK08133 307 -IVSFEVKGGREAAWRVIDATRLI-SITANL--G----DTKTTITHPATTTHGR 352 (390)
T ss_pred -EEEEEEcCCHHHHHHHHHhCCcc-eEeccC--C----CcceeeecCCCCCccc
Confidence 33333334577788888888733 111122 2 4455555555555433
No 342
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.59 E-value=2.4e-13 Score=159.23 Aligned_cols=217 Identities=18% Similarity=0.230 Sum_probs=145.1
Q ss_pred HHHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCcc----HHHHHhcCCEEEEEcC
Q 001586 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTN----PATAAMCGMKIVSVGT 709 (1049)
Q Consensus 634 i~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~----pa~a~~~G~~Vv~V~~ 709 (1049)
..++++.++++.|.+. .+..++|+++...+ ++.+. .++++|+++...++.. ...+...|++++.++.
T Consensus 62 ~~~Le~~lA~l~g~~~-~v~~~sG~~Ai~~~---l~all-----~pGD~Vvv~~p~Y~~t~~~~~~~~~~~g~~v~~v~~ 132 (405)
T PRK08776 62 RDLLGEALAELEGGAG-GVITATGMGAINLV---LNALL-----QPGDTLVVPHDAYGGSWRLFNALAKKGHFALITADL 132 (405)
T ss_pred HHHHHHHHHHHhCCCc-eEEEcCHHHHHHHH---HHHHh-----CCCCEEEEccCCchHHHHHHHHHHHhcCcEEEEECC
Confidence 4578899999999754 45666776555333 33331 2568899876555431 1224457888888876
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CccccccccHHHHHHHHHHcCCEEEEeccccccccCcCCCCccCCcEEE
Q 001586 710 DAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1049)
Q Consensus 710 d~~g~iD~~~L~~~i~~~~~~taaV~it~P-n~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~Pg~~GaDi~~ 788 (1049)
.|+++|+++++ ++|++|++++| |.+|.+. |+++|+++||++|+++++|+++.. +....|.++|+|+++
T Consensus 133 -----~d~~~l~~~i~---~~tklV~l~~P~NPtG~v~-dl~~I~~la~~~gi~vIvD~a~a~--~~~~~pl~~gaDivv 201 (405)
T PRK08776 133 -----TDPRSLADALA---QSPKLVLIETPSNPLLRIT-DLRFVIEAAHKVGALTVVDNTFLS--PALQKPLEFGADLVL 201 (405)
T ss_pred -----CCHHHHHHhcC---cCCeEEEEECCCCCCCccC-CHHHHHHHHHHcCCEEEEECCCcc--cccCCcccccCCEEE
Confidence 48999999997 78999999999 5699887 899999999999999999998753 234567788999999
Q ss_pred eCCCcccccCCCCCCCceeEEEEc-ccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhh
Q 001586 789 LNLHKTFCIPHGGGGPGMGPIGVK-KHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (1049)
Q Consensus 789 ~s~hK~f~~P~g~GGPg~G~i~~~-~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eG 867 (1049)
.|.||+|+.| |+--.|.++++ +++.+.+-. . + ...+ .+.+++. +|. ...|.+-
T Consensus 202 ~S~tK~l~g~---~~~~~G~vv~~~~~l~~~l~~----~--------~-~~~g-~~~s~~~-------a~l--~~~gl~t 255 (405)
T PRK08776 202 HSTTKYINGH---SDVVGGAVVARDAELHQQLVW----W--------A-NALG-LTGSPFD-------AFL--TLRGLRT 255 (405)
T ss_pred ecCceeecCC---CCceEEEEEeCCHHHHHHHHH----H--------H-HhcC-CCCCHHH-------HHH--HHhhhCc
Confidence 9999999521 11125776665 444333210 0 0 0011 1111221 233 2345556
Q ss_pred HHHHHHHHHHHHHHHHHHHhcc---CCeeecc
Q 001586 868 LTEASKIAILNANYMAKRLEKH---YPILFRG 896 (1049)
Q Consensus 868 l~~~~~~~~~~a~yL~~~L~~~---~~v~~~g 896 (1049)
+..+.++..+|+..+.+.|+++ -+|.|++
T Consensus 256 l~~r~~~~~~na~~la~~L~~~p~v~~V~yP~ 287 (405)
T PRK08776 256 LDARLRVHQENADAIAALLDGHAAVNQVYYPG 287 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCeeEEECCC
Confidence 7777788889999999999875 2345554
No 343
>PRK07505 hypothetical protein; Provisional
Probab=99.59 E-value=2.5e-13 Score=159.48 Aligned_cols=289 Identities=17% Similarity=0.194 Sum_probs=169.3
Q ss_pred HHHHHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHH--HhcCCEEEEEcC
Q 001586 632 EMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATA--AMCGMKIVSVGT 709 (1049)
Q Consensus 632 ~~i~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a--~~~G~~Vv~V~~ 709 (1049)
+...++++.|++++|. . .+..++|+.++++++..++.+.. .+ ++++.|+...+.|++..... ...+.+++.+|.
T Consensus 91 ~~~~~l~~~la~~~~~-~-~~~~~sG~~a~~~ai~~~~~~~~-~~-~~~~vi~~~~~~H~s~~~~~~~~~~~~~v~~~~~ 166 (402)
T PRK07505 91 QILKDLEEALSELFGA-S-VLTFTSCSAAHLGILPLLASGHL-TG-GVPPHMVFDKNAHASLNILKGICADETEVETIDH 166 (402)
T ss_pred HHHHHHHHHHHHHhCC-C-EEEECChHHHHHHHHHHHHhccc-CC-CCCCEEEEchhhhHhHHhhhhhhhcCCeEEEeCC
Confidence 4567899999999997 3 45566788777766655442211 11 12334445567887643221 224568888887
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-ccccccccHHHHHHHHHHcCCEEEEeccccccccCcCCCC------cc
Q 001586 710 DAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPG------YI 782 (1049)
Q Consensus 710 d~~g~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~Pg------~~ 782 (1049)
.|+++|+++++ +++.++++++|+ .+|.+. ++++|.++|+++|+++++|+++.. +++.+.| .+
T Consensus 167 -----~d~~~l~~~~~---~~~~~~vl~~p~~~~G~~~-~~~~i~~l~~~~~~~li~DEa~~~--~~~g~~g~~~~~~~~ 235 (402)
T PRK07505 167 -----NDLDALEDICK---TNKTVAYVADGVYSMGGIA-PVKELLRLQEKYGLFLYIDDAHGL--SIYGKNGEGYVRSEL 235 (402)
T ss_pred -----CCHHHHHHHHh---cCCCEEEEEecccccCCcC-CHHHHHHHHHHcCCEEEEECcccc--cCcCCCCCchHHHHc
Confidence 48999999987 456778888884 578877 699999999999999999998632 2221111 11
Q ss_pred C---Cc--EEEeCCCcccccCCCCCCCceeEEEE-cccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHH
Q 001586 783 G---AD--VCHLNLHKTFCIPHGGGGPGMGPIGV-KKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPIS 856 (1049)
Q Consensus 783 G---aD--i~~~s~hK~f~~P~g~GGPg~G~i~~-~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a 856 (1049)
+ .| +++.++.|.|+ ++| |++.+ ++++.+.+.... +.... .++. +...++++
T Consensus 236 ~~~~~d~~i~~~s~sK~~~------~~G-g~~~~~~~~~~~~~~~~~---------~~~t~-~~~~------~~~a~aa~ 292 (402)
T PRK07505 236 DYRLNERTIIAASLGKAFG------ASG-GVIMLGDAEQIELILRYA---------GPLAF-SQSL------NVAALGAI 292 (402)
T ss_pred CCCCCCCeEEEEechhhhh------ccC-eEEEeCCHHHHHHHHHhC---------CCcee-CCCC------CHHHHHHH
Confidence 2 34 44556778774 222 66654 444444321100 00000 0111 12233334
Q ss_pred HHHHHHHchhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHHHCCcccCC
Q 001586 857 YTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPT 936 (1049)
Q Consensus 857 ~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~ 936 (1049)
.+.+..+..+.+.+..+...++.+++.+.+.. .+ .+ .......+.+.. .....++.++|.++||.+..
T Consensus 293 ~a~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~--~~--~g---~~~~i~~~~~~~-----~~~~~~~~~~l~~~Gi~v~~ 360 (402)
T PRK07505 293 LASAEIHLSEELDQLQQKLQNNIALFDSLIPT--EQ--SG---SFLPIRLIYIGD-----EDTAIKAAKQLLDRGFYTSP 360 (402)
T ss_pred HHHHHHHhccCcHHHHHHHHHHHHHHHHHHHh--cC--CC---CCCCEEEEEeCC-----HHHHHHHHHHHHHCCCeEee
Confidence 55555555555555444333333333222211 11 11 111111122210 11356799999999999865
Q ss_pred CCCC-C---CCEEEEEccCCCCHHHHHHHHHHHHHHHH
Q 001586 937 MSWP-V---PGTLMIEPTESESKEELDRYCDALISIRE 970 (1049)
Q Consensus 937 ~~~p-~---~~~lri~~t~~~t~eeid~fv~aL~~i~~ 970 (1049)
..+| + .+.+|++|+..+|++|+|+++++|.+++.
T Consensus 361 ~~~p~~~~~~~~lRi~~~~~~t~eei~~~~~~l~~~l~ 398 (402)
T PRK07505 361 VFFPVVAKGRAGLRIMFRASHTNDEIKRLCSLLKEILD 398 (402)
T ss_pred ecCCCCCCCCceEEEecCccCCHHHHHHHHHHHHHHHH
Confidence 5554 2 25899999999999999999999998754
No 344
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.59 E-value=3.8e-13 Score=143.79 Aligned_cols=312 Identities=15% Similarity=0.118 Sum_probs=203.8
Q ss_pred HHHHHHHHHHHHHhhCCCcc--ccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHH----HHHhcCCEE
Q 001586 631 QEMFNNLGEWLCTITGFDSF--SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA----TAAMCGMKI 704 (1049)
Q Consensus 631 ~~~i~el~~~la~l~G~~~~--~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa----~a~~~G~~V 704 (1049)
.|++.++.+-+..++..... .+.+++|..|-++++.= .. .++|+||+-.. |.... .++..|++|
T Consensus 49 ~qIm~~v~egikyVFkT~n~~tf~isgsGh~g~E~al~N---~l-----ePgd~vLv~~~--G~wg~ra~D~~~r~ga~V 118 (385)
T KOG2862|consen 49 VQIMDEVLEGIKYVFKTANAQTFVISGSGHSGWEAALVN---LL-----EPGDNVLVVST--GTWGQRAADCARRYGAEV 118 (385)
T ss_pred HHHHHHHHHHHHHHhccCCCceEEEecCCcchHHHHHHh---hc-----CCCCeEEEEEe--chHHHHHHHHHHhhCcee
Confidence 46788888888888876553 35667787787766532 21 25778886432 44433 256789999
Q ss_pred EEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-ccccccccHHHHHHHHHHcCCEEEEeccccccccCcC-CCCcc
Q 001586 705 VSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT-SPGYI 782 (1049)
Q Consensus 705 v~V~~d~~g~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~-~Pg~~ 782 (1049)
..|+.+..+.+.++++++++.+| +..+|++++.. .+|+..+-++.+.++||+|+++++||++. ++++.. .-.+|
T Consensus 119 ~~v~~~~G~~~~le~i~~~lsqh--~p~~vfv~hgdsSTgV~q~~~~~~g~lc~k~~~lllVD~Va--Slggt~F~mDew 194 (385)
T KOG2862|consen 119 DVVEADIGQAVPLEEITEKLSQH--KPKAVFVTHGDSSTGVLQDLLAISGELCHKHEALLLVDTVA--SLGGTEFEMDEW 194 (385)
T ss_pred eEEecCcccCccHHHHHHHHHhc--CCceEEEEecCccccccchHHHHHHHHhhcCCeEEEEechh--hcCCccceehhh
Confidence 99988777889999999999975 55578888874 59999933777889999999999999873 455532 22578
Q ss_pred CCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCcc---ccCCCC---CCCCCCCCC--CCCCccchhhHHHHH
Q 001586 783 GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPV---VSTGGI---PAPEKSQPL--GTIAAAPWGSALILP 854 (1049)
Q Consensus 783 GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~v---g~t~~~---~~~~~~~~t--~~i~sa~~g~~~~~~ 854 (1049)
|+|+......|.++.| ||+++|+.+++....+..+.- ....|. +.+-..... ....+.| ...+-
T Consensus 195 gVDvaytgSQKaL~aP-----~GLsiisfS~ka~~~~~~rK~~~~~~yFd~~~~~~~wgc~~e~~~yhhT~p---v~lly 266 (385)
T KOG2862|consen 195 GVDVAYTGSQKALGAP-----AGLSIISFSDKALEAIRDRKTKPVSFYFDILRLGNFWGCDGEPRAYHHTPP---VQLLY 266 (385)
T ss_pred cccEEEecchhhcCCC-----CCcceeecCHHHHHHHhhccCCceEEEEeHHhhcchhccCCcccccccCCc---HHHHH
Confidence 9999998899999644 688999998765544432211 000111 000000000 0011111 01112
Q ss_pred HHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCC--CceeeEEEEeccCccccCCCCHHHHHHHHHHC-
Q 001586 855 ISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVN--GTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDY- 930 (1049)
Q Consensus 855 ~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~-~~v~~~g~~--g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~- 930 (1049)
.--+.|+.+-++|+.+..+++.++++++...|+++ ++.....+. .+..+ .+.++ .+++..+|+.++.++
T Consensus 267 ~Lr~AL~~I~eeGL~~~~~rH~e~s~~l~~~l~~~GLq~fv~~e~~rlptvt--tv~vp-----~gvDw~dVv~~~~~~~ 339 (385)
T KOG2862|consen 267 SLRAALALIAEEGLENSWRRHREMSKWLKLSLEALGLQLFVVDEELRLPTVT--TVKVP-----YGVDWKDVVAYAMSHY 339 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccceecChhhccCcce--eeecC-----CCCCHHHHHHHHHHhc
Confidence 22455777789999999999999999999999985 554222211 12222 23333 578999999998875
Q ss_pred CcccCCCCCC-CCCEEEEEccCC-CCHHHHHHHHHHHHHHHHH
Q 001586 931 GFHGPTMSWP-VPGTLMIEPTES-ESKEELDRYCDALISIREE 971 (1049)
Q Consensus 931 Gi~~~~~~~p-~~~~lri~~t~~-~t~eeid~fv~aL~~i~~~ 971 (1049)
++.+...--| ++..+||..+-. -+.+-||..++.|++.++.
T Consensus 340 ~vei~gglg~~~gKv~RIGl~gcna~~e~i~~v~~ll~~alq~ 382 (385)
T KOG2862|consen 340 VVEIGGGLGPTVGKVFRIGLLGCNANVEYIDNVVELLKLALQR 382 (385)
T ss_pred CEEeccccCCCcccEEEEEEeeccCCcHHHHHHHHHHHHHHhh
Confidence 6555422123 457889987754 4567789999888877654
No 345
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.59 E-value=8.3e-14 Score=162.46 Aligned_cols=283 Identities=15% Similarity=0.110 Sum_probs=179.0
Q ss_pred HHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHH----HHhcCCEEEEEcCC
Q 001586 635 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGTD 710 (1049)
Q Consensus 635 ~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~----a~~~G~~Vv~V~~d 710 (1049)
.++++.++++.|.+. .+..++|+.+..++++++. .++++||++...|+..... +...|+++..++.
T Consensus 64 ~~Le~~lA~l~G~~~-al~~~sG~~Ai~~~l~al~--------~~Gd~Vv~~~~~y~~~~~~~~~~~~~~gi~~~~~~~- 133 (386)
T PRK06767 64 KLFEERMAVLEGGEE-ALAFGSGMAAISATLIGFL--------KAGDHIICSNGLYGCTYGFLEVLEEKFMITHSFCDM- 133 (386)
T ss_pred HHHHHHHHHHhCCCc-EEEECCHHHHHHHHHHHHh--------CCCCEEEEcCCcHHHHHHHHHHHHhhcCeEEEEeCC-
Confidence 478899999999865 4556777766544443331 2568899988766654333 2345777777765
Q ss_pred CCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-ccccccccHHHHHHHHHHcCCEEEEeccccccccCcCCCCccCCcEEEe
Q 001586 711 AKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHL 789 (1049)
Q Consensus 711 ~~g~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~Pg~~GaDi~~~ 789 (1049)
.|+++++++++ ++|++|++++|+ .+|.+. |+++|+++||++|+++++|+++. .+.+..|-+.|+|+++.
T Consensus 134 ----~d~~~l~~~i~---~~tklV~lesp~NptG~v~-dl~~I~~la~~~g~~vivD~a~a--~~~~~~pl~~g~Div~~ 203 (386)
T PRK06767 134 ----ETEADIENKIR---PNTKLIFVETPINPTMKLI-DLKQVIRVAKRNGLLVIVDNTFC--SPYLQRPLELGCDAVVH 203 (386)
T ss_pred ----CCHHHHHHhhC---cCceEEEEeCCCCCCceec-CHHHHHHHHHHcCCEEEEECCCc--ccccCCchhcCCcEEEe
Confidence 48999999997 789999999995 589887 79999999999999999999864 22344666789999999
Q ss_pred CCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHH
Q 001586 790 NLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLT 869 (1049)
Q Consensus 790 s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~ 869 (1049)
|++|+|+.+ |.+-+|+++++++....+-... + ...++..+ ++ .+|.. ..|-+-+.
T Consensus 204 S~sK~l~g~---g~~~gG~v~~~~~~i~~~~~~~-----------~-~~~g~~~~-~~-------~a~l~--~~~L~tl~ 258 (386)
T PRK06767 204 SATKYIGGH---GDVVAGVTICKTRALAEKIRPM-----------R-KDIGGIMA-PF-------DAWLL--LRGLKTLA 258 (386)
T ss_pred cCcceecCC---CCceeEEEEeChHHHHHHHHHH-----------H-HHhCCCCC-HH-------HHHHH--HcCCCcHH
Confidence 999998411 2233689988876443211000 0 00111111 11 13333 33334455
Q ss_pred HHHHHHHHHHHHHHHHHhcc--CC-eeeccCC------CceeeEEEEeccCccccCCCCHHHHHHHHHHCCcccC-----
Q 001586 870 EASKIAILNANYMAKRLEKH--YP-ILFRGVN------GTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGP----- 935 (1049)
Q Consensus 870 ~~~~~~~~~a~yL~~~L~~~--~~-v~~~g~~------g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~----- 935 (1049)
.+.++..+++.++++.|+++ +. +.|++.+ ......+.|+++. ...++..+.++|...++.++
T Consensus 259 ~r~~~~~~~a~~la~~L~~~p~v~~v~~p~~~~~~~~~~~~gg~vsf~l~~----~~~~~~~f~~~l~~~~~~~s~G~~~ 334 (386)
T PRK06767 259 VRMDRHCDNAEKIVSFLKNHDAVEGVWYPEGELASRQMKRGGGVISFSIKG----GKEETQAFINDLHFITIAVSLGDTE 334 (386)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCccEEECCCcHHHHHhCCCCCceEEEEEcC----CHHHHHHHHHhCCccEEecCCCCcC
Confidence 66777889999999999986 33 3333110 0011234455431 01235677777766554321
Q ss_pred C-CCCC------------------CCCEEEEEccCCCCHHHHHHHHHHHHHHHH
Q 001586 936 T-MSWP------------------VPGTLMIEPTESESKEELDRYCDALISIRE 970 (1049)
Q Consensus 936 ~-~~~p------------------~~~~lri~~t~~~t~eeid~fv~aL~~i~~ 970 (1049)
+ +..| ..+.+|+|+. .|+.|.++++|.+.+.
T Consensus 335 sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~svG----lE~~~dl~~dl~~al~ 384 (386)
T PRK06767 335 TLIQHPATMTHAAIPAELRQEMGIYDNLIRLSVG----LESWEDIVSDLEQALK 384 (386)
T ss_pred ccccCCCccccccCCHHHHHhcCCCCCeEEEEec----cCCHHHHHHHHHHHHh
Confidence 1 1111 1367999986 4567778888877764
No 346
>PRK07046 aminotransferase; Validated
Probab=99.59 E-value=1.9e-13 Score=162.02 Aligned_cols=298 Identities=16% Similarity=0.154 Sum_probs=186.6
Q ss_pred HHHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEE-EcCCCCCccHHHHHh------------c
Q 001586 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAM------------C 700 (1049)
Q Consensus 634 i~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VL-ip~saHg~~pa~a~~------------~ 700 (1049)
..++.+.|+++++++.+ .+.+||+++++++++.+|+| ++|++|+ +..++||.+...... .
T Consensus 117 ~~~lAe~l~~~~~~~~v-~F~nSGtEA~e~AlrlAR~~------TGr~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~ 189 (453)
T PRK07046 117 AAWVGEELARRFGLPYW-QVATTATDANRFVLRWARAV------TGRPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLL 189 (453)
T ss_pred HHHHHHHHHHHhCCCEE-EEECCHHHHHHHHHHHHHHh------hCCCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCC
Confidence 44788899999887654 66899999999999988887 2456677 677899976443211 1
Q ss_pred CC------EEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-Cccccccc---cHHHHHHHHHHcCCEEEEecccc
Q 001586 701 GM------KIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDGANM 770 (1049)
Q Consensus 701 G~------~Vv~V~~d~~g~iD~~~L~~~i~~~~~~taaV~it~P-n~~G~i~~---di~eI~~lah~~G~ll~vD~A~~ 770 (1049)
|+ .+..+|. .|++++++.+. .+++++|+++.. +..|.+.+ .++++.++|+++|+++|+|+++.
T Consensus 190 g~~~~~~~~~~~~~~-----nd~~~l~~~l~--~~~vAavi~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~t 262 (453)
T PRK07046 190 GQVHDLTATTRVVEF-----NDLAALEAALA--DGDVAAVLAEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETHT 262 (453)
T ss_pred CCCccccCceEeeCC-----CCHHHHHHHhC--CCCeEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEcccc
Confidence 11 1223333 38999999995 368999988754 34576653 38999999999999999999865
Q ss_pred --ccccCcCCCCccCCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchh
Q 001586 771 --NAQVGLTSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWG 848 (1049)
Q Consensus 771 --~a~~gl~~Pg~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g 848 (1049)
.+.++...--..-+|++++ .|.+ ++|-| +|.+++++++++.+.... .. .........+++.|
T Consensus 263 fr~g~Gg~~~~~gv~PDi~t~--gK~l----ggG~P-i~av~g~~~i~~~~~~~~--~~-------~~~~~~~~~~T~~g 326 (453)
T PRK07046 263 ISSGPGGYTRAHGLEPDFLVV--GKPI----AGGVP-CAVYGFSAELAERAQAAK--AS-------APPGHSGIGTTLSA 326 (453)
T ss_pred CccCCcchhHHhCCCccceee--hhhh----cCCCc-ceeeeehHHHHHHHhhcc--cc-------CCCCCceeCCCCcc
Confidence 2333321111224799876 4766 34545 777888887765542100 00 00000112233556
Q ss_pred hHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc---CCe--eeccCCCceeeEEEEeccCcccc----CCCC
Q 001586 849 SALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPI--LFRGVNGTVAHEFIVDLRGLKNT----AGIE 919 (1049)
Q Consensus 849 ~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~---~~v--~~~g~~g~~~~e~iv~~~~~~~~----~g~~ 919 (1049)
+++.++++.+.|..+-.+++ .++.....++|+++|+++ +.+ .+.|. |. +..+.++-+..... ...+
T Consensus 327 npl~~aa~~a~L~~l~~~~~---~~~~~~~g~~l~~~L~~l~~~~~~~~~v~g~-G~-~~~i~~~~~~~~~~~~~~~~~~ 401 (453)
T PRK07046 327 NALAMAAMRATLAEVMTEAA---YAHMLALAARLAAGLRAVIARHGLPWHVTRV-GA-RVEFQFAPTPPRNGAEAAAALD 401 (453)
T ss_pred cHHHHHHHHHHHHHHhcccH---HHHHHHHHHHHHHHHHHHHHhCCCCeEEEEe-Cc-EEEEEEeCCCCCCHHHHhcccC
Confidence 78888888999988866554 344556778888888763 222 22232 22 22233321110000 0001
Q ss_pred ---HHHHHHHHHHCCcccCCCCCCCCCEEEEEccCCCCHHHHHHHHHHHHHHHHHH
Q 001586 920 ---PEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEI 972 (1049)
Q Consensus 920 ---~~~v~k~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~eeid~fv~aL~~i~~~i 972 (1049)
...+...|.++|+.+.. ..+.++++|+ +|++|||++++++.++++++
T Consensus 402 ~~~~~~~~~~~~~~Gv~~~~----~~~~~~~~p~--~t~~did~~~~~~~~~l~~~ 451 (453)
T PRK07046 402 PELEAALHLYLLNRGVLITP----FHNMMLVCPA--TTAADVDRLVAAFDACLGEL 451 (453)
T ss_pred HHHHHHHHHHHHHCCCEEec----ccCcEEEeCC--CCHHHHHHHHHHHHHHHHHH
Confidence 23566778889998642 2356778875 79999999999999988764
No 347
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=99.59 E-value=5.6e-13 Score=155.45 Aligned_cols=294 Identities=15% Similarity=0.152 Sum_probs=177.7
Q ss_pred hcHHHHHHHHHHHHHHhhCCC--cc-ccccCch-HHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCE
Q 001586 628 QGYQEMFNNLGEWLCTITGFD--SF-SLQPNAG-AAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMK 703 (1049)
Q Consensus 628 ~G~~~~i~el~~~la~l~G~~--~~-~l~~~sG-a~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~ 703 (1049)
+|..++...+.+++.+.+|.+ .. .+..++| .+|.. .+++.+. .++++|+++...+..+...++..|.+
T Consensus 67 ~G~~~lr~~ia~~~~~~~~~~~~~~~~vi~t~G~~~~l~---~~~~~~~-----~~gd~vlv~~P~y~~~~~~~~~~G~~ 138 (383)
T TIGR03540 67 EGMLAYRQAVADWYKRRFGVELDPETEVLSLIGSKEGIA---HIPLAFV-----NPGDIVLVPDPGYPVYRIGTLFAGGE 138 (383)
T ss_pred CCCHHHHHHHHHHHHHhhCCCCCCCCeEEECCCcHHHHH---HHHHHhC-----CCCCEEEEeCCCCcchHHHHHhcCCE
Confidence 566666767777777666663 22 3444444 44442 2333321 25688999888776666668899999
Q ss_pred EEEEcCCCC--CCCCHHHHHHHHHhcCCCeEEEEEEcCC-ccccccc--cHHHHHHHHHHcCCEEEEecccccc-ccCcC
Q 001586 704 IVSVGTDAK--GNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEE--GIDEICKIIHDNGGQVYMDGANMNA-QVGLT 777 (1049)
Q Consensus 704 Vv~V~~d~~--g~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~~--di~eI~~lah~~G~ll~vD~A~~~a-~~gl~ 777 (1049)
++.+|++.+ ..+|++++++++. +++++|++++|+ .+|.+-+ .+++|+++|+++|+++++|.++..- ..+..
T Consensus 139 v~~v~~~~~~g~~~d~~~l~~~~~---~~~~~v~i~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~~~ 215 (383)
T TIGR03540 139 PYEMPLKEENGFLPDFDAIPEDIA---KKAKLMFINYPNNPTGAVAPLKFFKELVEFAKEYNIIVCHDNAYSEITFDGYK 215 (383)
T ss_pred EEEEecCcccCCccCHHHHHhhcc---ccceEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCEEEEEecchhhhccCCCC
Confidence 999999744 3579999999886 688999999995 6998752 4899999999999999999986411 11111
Q ss_pred CC--Cc----cCCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHH
Q 001586 778 SP--GY----IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSAL 851 (1049)
Q Consensus 778 ~P--g~----~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~ 851 (1049)
.+ .. ....|+..++.|+|+.| |-++|++..++++...+... +.....+++. .
T Consensus 216 ~~~~~~~~~~~~~~i~~~SfSK~~g~~----GlRiG~~i~~~~l~~~~~~~------------~~~~~~~~~~------~ 273 (383)
T TIGR03540 216 APSFLEVDGAKDVGIEFHSLSKTYNMT----GWRIGMAVGNADLIAGLGKV------------KTNVDSGVFQ------A 273 (383)
T ss_pred CcCcccCCCcccCEEEEEecccccCCc----cceeeEEeCCHHHHHHHHHH------------HHhcccCCCh------H
Confidence 11 11 12336677788887433 56799999887665543210 0000011111 1
Q ss_pred HHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHH-HC
Q 001586 852 ILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-DY 930 (1049)
Q Consensus 852 ~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~-~~ 930 (1049)
...++..++. .+.+-+++..+...++.+++.+.|++. .+.+..+.+.++ ++++++ .+.+..+++++|. ++
T Consensus 274 ~q~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~~~~~~~--~~~~l~-----~~~~~~~~~~~ll~~~ 344 (383)
T TIGR03540 274 IQYAAIAALN-GPQDVVKEIRKIYQRRRDLLLEALKKI-GIDVEKPKATFY--VWVPVP-----EGYTSAEFAARLLEET 344 (383)
T ss_pred HHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHHHHHhC-CCEecCCCcceE--EEEECC-----CCCCHHHHHHHHHHHC
Confidence 1112222232 123334455555667788899999875 322222222221 345554 2456788898875 68
Q ss_pred CcccCCC-CCCC--CCEEEEEccCCCCHHHHHHHHHHH
Q 001586 931 GFHGPTM-SWPV--PGTLMIEPTESESKEELDRYCDAL 965 (1049)
Q Consensus 931 Gi~~~~~-~~p~--~~~lri~~t~~~t~eeid~fv~aL 965 (1049)
||.+... .|+. .+++|+++. .+.+++++.++.|
T Consensus 345 gi~v~~g~~f~~~~~~~~Ris~~--~~~~~l~~~l~~l 380 (383)
T TIGR03540 345 GVVVTPGVGFGEYGEGYIRISLT--VPDERLEEAVARI 380 (383)
T ss_pred CEEEecchhhCccCCCeEEEEec--CCHHHHHHHHHHH
Confidence 9987532 3432 478999996 3455555555444
No 348
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.58 E-value=2.8e-13 Score=157.01 Aligned_cols=228 Identities=18% Similarity=0.180 Sum_probs=156.0
Q ss_pred HHHHHHHHHHHhCCCCcceEeccchHHHHHHHHHHhhhccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCcch--
Q 001586 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKD-- 290 (1049)
Q Consensus 213 l~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a~~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~~~~-- 290 (1049)
..++++.+|++.|.+. +.++.+|++++.++. ++ .. +||+||+++..++.+...+...++.+|++++++|..+
T Consensus 54 ~~~le~~la~l~g~~~--~~~~~sG~~ai~~~~-~l-l~--~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~ 127 (366)
T PRK08247 54 RGVLEQAIADLEGGDQ--GFACSSGMAAIQLVM-SL-FR--SGDELIVSSDLYGGTYRLFEEHWKKWNVRFVYVNTASLK 127 (366)
T ss_pred HHHHHHHHHHHhCCCc--EEEEcCHHHHHHHHH-HH-hC--CCCEEEEecCCcCcHHHHHHHHhhccCceEEEECCCCHH
Confidence 3457789999999976 467888888777543 32 22 7899999999999988888776778999999988744
Q ss_pred -hhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCCC
Q 001586 291 -IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYG 366 (1049)
Q Consensus 291 -l~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~p~~~GaDivvgs~-k~lg~P~~~G 366 (1049)
+++ ++++|++|++++| |++|.+.|+++|+++||++|++++++ +..+.+.+..|.++|+||+++|. |.++++ |
T Consensus 128 ~l~~~i~~~tklv~le~P~NP~~~~~dl~~I~~la~~~g~~lIvD-~t~~~~~~~~p~~~g~di~i~S~sK~~~g~---~ 203 (366)
T PRK08247 128 AIEQAITPNTKAIFIETPTNPLMQETDIAAIAKIAKKHGLLLIVD-NTFYTPVLQRPLEEGADIVIHSATKYLGGH---N 203 (366)
T ss_pred HHHHhcccCceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEE-CCCccccccCchhcCCcEEEeecceeccCC---C
Confidence 445 7789999999998 68999999999999999999999994 45555566667788999999998 777532 1
Q ss_pred CCceEEEEEc-hhHHhcCCCceeeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcchHHH
Q 001586 367 GPHAAFLATS-QEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKT 445 (1049)
Q Consensus 367 GP~~G~l~~~-~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irrekaTsni~t~~~l~a~~aa~y~~~~g~~Gl~~ 445 (1049)
+--+|++.++ +++.+++. ..+.. ...|. +++. .|+...+-+-+..
T Consensus 204 d~~~G~iv~~~~~l~~~~~-------------------------~~~~~---~g~~~-s~~~-----a~l~~~~l~tl~~ 249 (366)
T PRK08247 204 DVLAGLVVAKGQELCERLA-------------------------YYQNA---AGAVL-SPFD-----SWLLIRGMKTLAL 249 (366)
T ss_pred ceeeeEEecChHHHHHHHH-------------------------HHHHh---cCCCC-ChHH-----HHHHHhccCcHHH
Confidence 2235677665 34433320 00000 11111 1111 1223334445556
Q ss_pred HHHHHHHHHHHHHHHhhcCCCeEEcCCC-CcceEEEecCC
Q 001586 446 IAQRVHGLAGTFALGLKKLGTVEVQGLP-FFDTVKVKCAD 484 (1049)
Q Consensus 446 ia~~~~~~a~~l~~~L~~~g~~~v~~~~-~~~~v~i~~~~ 484 (1049)
..++..+++..+++.|+++.++..+..| ...-++|.+++
T Consensus 250 r~~~~~~~a~~l~~~L~~~p~v~~v~~P~~gg~~sf~~~~ 289 (366)
T PRK08247 250 RMRQHEENAKAIAAFLNEQPGVTDVLYPGRGGMLSFRLQD 289 (366)
T ss_pred HHHHHHHHHHHHHHHHHhCCCeeEEecCCcCcEEEEEECC
Confidence 6667789999999999988447643222 23345555544
No 349
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.58 E-value=2.6e-13 Score=147.49 Aligned_cols=397 Identities=19% Similarity=0.233 Sum_probs=231.2
Q ss_pred hccccCcCccccccccccccCccccccccccCcccccCCCCCchhhhhcHHHHHHHHHHHHHHhhCCCc----cccccCc
Q 001586 581 QSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDS----FSLQPNA 656 (1049)
Q Consensus 581 ~~~d~~~~~~~i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~~G~~~~i~el~~~la~l~G~~~----~~l~~~s 656 (1049)
+++|......|-.||||- .|.+.|-.|-.+ |+.-|.| ..+++.-.|+.--+.+|+|. +++||.|
T Consensus 47 aSENFts~aVmeAlGS~l--tNKYSEGyPG~R--YYGGne~--------ID~iE~LCq~RALeaF~ldp~kWGVNVQp~S 114 (477)
T KOG2467|consen 47 ASENFTSRAVMEALGSCL--TNKYSEGYPGAR--YYGGNEY--------IDQIELLCQKRALEAFGLDPEKWGVNVQPYS 114 (477)
T ss_pred ecccchHHHHHHHHhHHh--hcccccCCCccc--ccCcchH--------HHHHHHHHHHHHHHHhCCCHHHCceeeccCC
Confidence 445544333444678873 256666665322 2222222 12344445677778999987 5899999
Q ss_pred hHHHHHHHHHHHHHHHHhcCCCCCCEEE---EcCCCCCccHHHHHhcCC-------EEEEEcCCC-CCCCCHHHHHHHHH
Q 001586 657 GAAGEYAGLMVIRAYHKARGDHHRNVCI---IPVSAHGTNPATAAMCGM-------KIVSVGTDA-KGNINIEELRKAAE 725 (1049)
Q Consensus 657 Ga~ge~a~l~air~y~~~~G~~~r~~VL---ip~saHg~~pa~a~~~G~-------~Vv~V~~d~-~g~iD~~~L~~~i~ 725 (1049)
|+-+++++..|+.. +.++|. .|+--|-+|.-......+ +--+.++|+ .|-+|.+.|++...
T Consensus 115 GSPANfavYtall~--------Ph~RiMGLDLP~GGHLsHGy~T~~kkISa~SiyFeSmPYkv~~~TG~IDYD~Le~~A~ 186 (477)
T KOG2467|consen 115 GSPANFAVYTALLK--------PHERIMGLDLPSGGHLSHGYQTPTKKISATSIYFESMPYKVDPSTGYIDYDKLEKTAT 186 (477)
T ss_pred CCchhhHHHhhhcC--------CCCeeeeccCCCCCccccccccCCceeeeeeeecccCceeeCCCCCceehHHHHHHHH
Confidence 99999888777642 445565 344333333222111111 122334553 59999999999887
Q ss_pred hcCCCeEEEEEEcCCccccccccHHHHHHHHHHcCCEEEEecccccccc---CcCCCCccCCcEEEeCCCcccccCCCCC
Q 001586 726 ANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQV---GLTSPGYIGADVCHLNLHKTFCIPHGGG 802 (1049)
Q Consensus 726 ~~~~~taaV~it~Pn~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~---gl~~Pg~~GaDi~~~s~hK~f~~P~g~G 802 (1049)
.++++ .|+.-...+.-.+ |..++.+||.+.|+.+.+|-||..+++ ...+|.++ +||++...||++ .
T Consensus 187 ~frPk--~iiaG~SaY~R~~--DYaR~R~Iad~~gA~Lm~DMAHISgLVAA~vipsPFey-~DiVTTTTHKsL------R 255 (477)
T KOG2467|consen 187 LFRPK--LIIAGTSAYSRLI--DYARFRKIADKVGAYLMADMAHISGLVAAGVIPSPFEY-CDIVTTTTHKSL------R 255 (477)
T ss_pred hcCCc--EEEeccccchhhc--cHHHHHHHHHhcCceeehhhhhHHHHHhcccCCCcccc-cceeeccccccc------c
Confidence 55444 4554443444445 599999999999999999988754443 23456654 899999999998 7
Q ss_pred CCceeEEEEcccccccCCCC--ccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHH
Q 001586 803 GPGMGPIGVKKHLAPFLPSH--PVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNAN 880 (1049)
Q Consensus 803 GPg~G~i~~~~~l~~~lpg~--~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~ 880 (1049)
||+.|.|..++-....-|+. .+....+. +-...-++...+.|.+.. +++.|.| |+.-..-.+++..++.+.|++
T Consensus 256 GPRg~mIFyRkGvk~~~~k~g~~i~ydlE~--kINfaVFP~lQGGPHNht-IaalAvA-LkQa~tpefk~Yq~qV~~Nak 331 (477)
T KOG2467|consen 256 GPRGAMIFYRKGVKSIKPKQGKEILYDLED--KINFAVFPGLQGGPHNHT-IAALAVA-LKQAMTPEFKEYQKQVLKNAK 331 (477)
T ss_pred CCcceeEEEeccCCcCCCCCCCcceechhh--hhhhhccccccCCCCcch-HHHHHHH-HHhhCCHHHHHHHHHHHHHHH
Confidence 99999999997544433221 11000000 000000111122232222 2222333 444444568889999999999
Q ss_pred HHHHHHhcc-CCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHHHCCcccCCCCCC------CCCEEEEEccCCC
Q 001586 881 YMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWP------VPGTLMIEPTESE 953 (1049)
Q Consensus 881 yL~~~L~~~-~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~p------~~~~lri~~t~~~ 953 (1049)
.|.++|.+. |+++..| .-.|-+.+|+++ .|++...+-+.|..-+|.++.-..| .++.+||...-.+
T Consensus 332 ala~~l~~~Gy~lvtgG---TDnHlvLvDLr~----~G~dGarvE~vle~~~I~~NKNtvpGD~Sal~PgGiRiGtPAmT 404 (477)
T KOG2467|consen 332 ALASALISRGYKLVTGG---TDNHLVLVDLRP----KGVDGARVEKVLELCHIALNKNTVPGDKSALSPGGIRIGTPAMT 404 (477)
T ss_pred HHHHHHHHcCceEecCC---ccceEEEEeccc----cCCchHHHHHHHHHhhhhhcCCcCCCCccccCCCceeccchhhc
Confidence 999999886 8886533 445678899875 4677666666666566765421111 3577888655433
Q ss_pred ----CHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCccccccchhhHHHHHhHHHhhccCCCccccCchhh
Q 001586 954 ----SKEELDRYCDALISIREEIAQIENGKADIHNNVLKVTCLFLHHGYFFSYIVKEINICISSSPWNQSLFMKPY 1025 (1049)
Q Consensus 954 ----t~eeid~fv~aL~~i~~~i~~i~~g~~~~~~~~l~~~ph~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~ 1025 (1049)
.++|.++..+-|.+.++...++..... ...++.---.+.++...+.-+.++++-| ++|.+ .||+|-
T Consensus 405 sRG~~e~df~~v~~fi~~av~i~~~~~~~~~---~~~lkdf~~~~~~~~~~~~~v~~Lr~~V--e~fa~-~fp~pg 474 (477)
T KOG2467|consen 405 SRGFGEEDFEKVADFIDRAVKIALEIQKEAG---GKKLKDFKKFLSENKVMSEEVAELRKRV--EEFAG-QFPMPG 474 (477)
T ss_pred ccCccHHHHHHHHHHHHHHHHHHHHHHhhcc---cchHHHHHHHhccCchhHHHHHHHHHHH--HHHHh-cCCCCC
Confidence 467777777777776665555432211 1233333333444443333344444444 55643 688774
No 350
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.58 E-value=8.1e-13 Score=153.75 Aligned_cols=276 Identities=18% Similarity=0.256 Sum_probs=177.2
Q ss_pred HHHHHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEE-EcCCCCCccHHHHHhcCC--------
Q 001586 632 EMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGM-------- 702 (1049)
Q Consensus 632 ~~i~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VL-ip~saHg~~pa~a~~~G~-------- 702 (1049)
+...++.++++++++.+. .++.++|+++++++++.+|.| . ++++|| .....||.........|.
T Consensus 71 ~~~~~la~~l~~~~~~~~-~~~~~sG~~a~~~A~~~a~~~---~---g~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~ 143 (377)
T PRK02936 71 SLQEEVASLLAENSAGDL-VFFCNSGAEANEAALKLARKH---T---GKSKIVTFEQSFHGRTFGTMSATGQEKIKEGFG 143 (377)
T ss_pred HHHHHHHHHHHhcCCCCE-EEEeCCcHHHHHHHHHHHHHh---c---CCCeEEEECCCcCCCcHHhhhccCCccccccCC
Confidence 445678888888887654 467889999998888877654 1 345566 456789877655443332
Q ss_pred ----EEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-ccccccc---cHHHHHHHHHHcCCEEEEecccccccc
Q 001586 703 ----KIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQV 774 (1049)
Q Consensus 703 ----~Vv~V~~d~~g~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~~---di~eI~~lah~~G~ll~vD~A~~~a~~ 774 (1049)
+++.++. .|+++|+++++ +++++|+++.+. ..|++.+ ++++|.++|++||+++++|+++.
T Consensus 144 ~~~~~~~~~~~-----~d~~~l~~~~~---~~~~~ii~e~i~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~---- 211 (377)
T PRK02936 144 PLLPGFTHVPF-----NDIKALKEVMN---EEVAAVMLEVVQGEGGVIPADPAFLQEVQTLCKKFGALLIIDEVQT---- 211 (377)
T ss_pred CCCCCceEeCC-----CCHHHHHHhcc---CCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc----
Confidence 1223333 27999999986 789999998774 4566532 49999999999999999999853
Q ss_pred CcCCCC------cc--CCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccc
Q 001586 775 GLTSPG------YI--GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAP 846 (1049)
Q Consensus 775 gl~~Pg------~~--GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~ 846 (1049)
++...| .+ ..|++++ .|+|+ +|-.+|+++.++++.+.+.... + ....+
T Consensus 212 g~g~~g~~~~~~~~~~~~di~t~--sK~l~-----~G~~ig~v~~~~~~~~~~~~~~---------~-----~~t~~--- 267 (377)
T PRK02936 212 GIGRTGTLFAYEQFGLDPDIVTV--AKGLG-----NGIPVGAMIGKKELGTAFGPGS---------H-----GSTFG--- 267 (377)
T ss_pred CCCcCchhhHHHhhCCCCcEEEE--ccccc-----CCCccEEEEEcHHHHhhccCCC---------C-----CCCCC---
Confidence 232222 12 3577654 68774 3445778888887766542110 0 01111
Q ss_pred hhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc---CCeee--ccCCCceeeEEEEeccCccccCCCCHH
Q 001586 847 WGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPILF--RGVNGTVAHEFIVDLRGLKNTAGIEPE 921 (1049)
Q Consensus 847 ~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~---~~v~~--~g~~g~~~~e~iv~~~~~~~~~g~~~~ 921 (1049)
+++..++++.+.|..+..+. ..++..++.++++++|++. +.... .+ .| . .+.++++ .+..
T Consensus 268 -~~~~~~aaa~a~l~~~~~~~---~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~-~g-~--~~~i~~~-------~~~~ 332 (377)
T PRK02936 268 -GNPLAMAAAKEVLQVIKQPS---FLEEVQEKGEYFLQKLQEELEHLECVKNIRG-KG-L--MIGIECT-------EEVA 332 (377)
T ss_pred -CCHHHHHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHHHHhhCCcEEeEee-cc-e--EEEEEec-------chHH
Confidence 23344455556666553322 2344556778888888763 33221 11 12 1 2344443 1366
Q ss_pred HHHHHHHHCCcccCCCCCCCCCEEEEEccCCCCHHHHHHHHHHHHHH
Q 001586 922 DVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISI 968 (1049)
Q Consensus 922 ~v~k~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~eeid~fv~aL~~i 968 (1049)
.+.+.|.++|+.+.... .+.+|++|+...+++++|++++.|+++
T Consensus 333 ~~~~~l~~~gv~v~~~g---~~~lRi~p~~~~~~~~i~~~i~~l~~~ 376 (377)
T PRK02936 333 PVIEQLREEGLLVLSAG---PNVIRLLPPLVVTKEELDQAVYLLKKV 376 (377)
T ss_pred HHHHHHHHCCeEEecCC---CCEEEEECCcccCHHHHHHHHHHHHHh
Confidence 78899999998864222 378999999899999999999999765
No 351
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.58 E-value=5.3e-14 Score=164.39 Aligned_cols=210 Identities=16% Similarity=0.140 Sum_probs=144.4
Q ss_pred HHHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHH----HHHhcCCEEEEEcC
Q 001586 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA----TAAMCGMKIVSVGT 709 (1049)
Q Consensus 634 i~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa----~a~~~G~~Vv~V~~ 709 (1049)
..+++++++++.|.+.+ +..++|.++...++.++. .++++||++...|+.... .+...|++++.++.
T Consensus 66 ~~~le~~lA~l~g~~~~-i~~ssG~~Ai~~~l~all--------~~GD~Vi~~~~~y~~~~~~~~~~~~~~Gi~v~~vd~ 136 (398)
T PRK08249 66 VQAFEEKVRILEGAEAA-TAFSTGMAAISNTLYTFL--------KPGDRVVSIKDTYGGTNKIFTEFLPRMGVDVTLCET 136 (398)
T ss_pred HHHHHHHHHHHhCCCeE-EEeCChHHHHHHHHHHhc--------CCCCEEEEcCCchHHHHHHHHHHHhhCCeEEEEcCC
Confidence 45789999999998764 566777766644443321 256889998876654322 24467999888775
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-ccccccccHHHHHHHHHHcCCEEEEeccccccccCcCCCCccCCcEEE
Q 001586 710 DAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1049)
Q Consensus 710 d~~g~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~Pg~~GaDi~~ 788 (1049)
.|+++++++++ ++|++|++++|+ .+|.+. |+++|+++||++|+++++|+++.... ...|..+|+|+++
T Consensus 137 -----~d~e~l~~~i~---~~tklV~ie~p~NPtg~v~-dl~~I~~la~~~gi~livD~t~a~~~--~~~~l~~~~Divv 205 (398)
T PRK08249 137 -----GDHEQIEAEIA---KGCDLLYLETPTNPTLKIV-DIERLAAAAKKVGALVVVDNTFATPI--NQNPLALGADLVI 205 (398)
T ss_pred -----CCHHHHHHhcC---CCCeEEEEECCCCCCCccC-CHHHHHHHHHHcCCEEEEECCcCccc--cCCchhhCCCEEe
Confidence 68999999997 789999999995 689887 89999999999999999999865222 2346668999999
Q ss_pred eCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhH
Q 001586 789 LNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGL 868 (1049)
Q Consensus 789 ~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl 868 (1049)
.|++|+|+.+ |.-..|+++.++++.+.+.. . + ...+. +.++ ..+| +...+.+-+
T Consensus 206 ~S~sK~l~g~---~~~~gG~vv~~~~l~~~l~~--~----------~-~~~g~-~~s~-------~~a~--l~l~~l~tL 259 (398)
T PRK08249 206 HSATKFLSGH---ADALGGVVCGSKELMEQVYH--Y----------R-EINGA-TMDP-------MSAY--LILRGMKTL 259 (398)
T ss_pred ccCceecCCC---CCceEEEEECCHHHHHHHHH--H----------H-HhcCC-CCCH-------HHHH--HHHhCcchH
Confidence 9999998511 11124777766655544310 0 0 00111 1111 1122 334455667
Q ss_pred HHHHHHHHHHHHHHHHHHhcc
Q 001586 869 TEASKIAILNANYMAKRLEKH 889 (1049)
Q Consensus 869 ~~~~~~~~~~a~yL~~~L~~~ 889 (1049)
..+.++..+++..+.+.|+++
T Consensus 260 ~~R~~~~~~na~~la~~L~~~ 280 (398)
T PRK08249 260 KLRVRQQQESAMALAKYLQTH 280 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHcC
Confidence 777788889999999999875
No 352
>PRK04311 selenocysteine synthase; Provisional
Probab=99.58 E-value=2.6e-13 Score=160.33 Aligned_cols=290 Identities=22% Similarity=0.259 Sum_probs=178.2
Q ss_pred HHHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCc------cHHHHHhcCCEEEEE
Q 001586 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGT------NPATAAMCGMKIVSV 707 (1049)
Q Consensus 634 i~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~------~pa~a~~~G~~Vv~V 707 (1049)
..++++.+++++|.+.+ +..++|+.|...++ ... .++++||+++..|.. .|..+...|+++++|
T Consensus 129 ~~~~e~~lA~l~Gae~a-~vv~sgtaAl~l~l---~~l------~~GdeVIvs~~e~~~~ggs~~i~~~~~~~G~~l~~v 198 (464)
T PRK04311 129 DRALAALLCALTGAEDA-LVVNNNAAAVLLAL---NAL------AAGKEVIVSRGELVEIGGAFRIPDVMRQAGARLVEV 198 (464)
T ss_pred HHHHHHHHHHHhCCCeE-EEECCHHHHHHHHH---HHh------CCCCEEEEcchhhhhcCcchhhHHHHHHCCcEEEEE
Confidence 55788999999998764 55677776663333 221 256789998754431 233456789999999
Q ss_pred cCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCCc---cccc-cccHHHHHHHHHHcCCEEEEeccccc----cccC----
Q 001586 708 GTDAKGNINIEELRKAAEANRDNLSTLMVTYPST---HGVY-EEGIDEICKIIHDNGGQVYMDGANMN----AQVG---- 775 (1049)
Q Consensus 708 ~~d~~g~iD~~~L~~~i~~~~~~taaV~it~Pn~---~G~i-~~di~eI~~lah~~G~ll~vD~A~~~----a~~g---- 775 (1049)
+.+ +..++++++++|+ ++|++|++.+++. .|.. ..|+++|+++||++|+++++|++... +..+
T Consensus 199 ~~~--~~t~~~dle~aI~---~~TklV~~vh~sN~~i~G~~~~~dl~eI~~lak~~gi~vivD~gsG~l~~~~~~gl~~~ 273 (464)
T PRK04311 199 GTT--NRTHLRDYEQAIN---ENTALLLKVHTSNYRIEGFTKEVSLAELAALGKEHGLPVVYDLGSGSLVDLSQYGLPDE 273 (464)
T ss_pred CCC--CCCCHHHHHHhcC---ccCeEEEEEcCCCccccccCCcCCHHHHHHHHHHcCCeEEEECCCcccccchhccCCCC
Confidence 863 4578999999997 7899999998853 4532 23799999999999999999974210 0000
Q ss_pred --cCCCCccCCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHH
Q 001586 776 --LTSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALIL 853 (1049)
Q Consensus 776 --l~~Pg~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~ 853 (1049)
+..|.++|+|++++|+||+| |||..|++++++++.+++..+..+... ...+ ..+.+
T Consensus 274 p~~~~~l~~GaDiv~fSg~K~L------gGp~~G~i~g~~~li~~l~~~~~~r~l-----r~dk-----------~~l~~ 331 (464)
T PRK04311 274 PTVQELLAAGVDLVTFSGDKLL------GGPQAGIIVGKKELIARLKKHPLKRAL-----RVDK-----------LTLAA 331 (464)
T ss_pred CchhhHHhcCCcEEEecCcccc------cCCceEEEEEcHHHHHHHhhchhHHHH-----hcch-----------HHHHH
Confidence 11234589999999999998 688899999998877766533221100 0000 00111
Q ss_pred HHH--HHHHH----HHchhh---HHHHHHHHHHHHHHHHHHHhccC------Ceeec----c---CCCceeeEEEEeccC
Q 001586 854 PIS--YTYIA----MMGSKG---LTEASKIAILNANYMAKRLEKHY------PILFR----G---VNGTVAHEFIVDLRG 911 (1049)
Q Consensus 854 ~~a--~a~l~----~lG~eG---l~~~~~~~~~~a~yL~~~L~~~~------~v~~~----g---~~g~~~~e~iv~~~~ 911 (1049)
.-+ -.|+. ..+-.+ +....++..++|..+++.|+++. .+.-. | ..+.....+.+.+++
T Consensus 332 l~~~l~~~~~~~~~~~~i~~l~~l~~~~~~~~~~A~~la~~L~~~~~~~~~~~~~~~~~~~gggs~p~~~~~~~~v~~~~ 411 (464)
T PRK04311 332 LEATLRLYLDPEKLAEEIPTLRLLTRSPEELRARAERLAAALKAALGAAFAVEVVPSFSQVGGGSLPVDRLPSAAVTLTP 411 (464)
T ss_pred HHHHHHHHhChhhhhhhCcHHHHhcCCHHHHHHHHHHHHHHHHhccCCCeeEEEEEccCccCCCCCcCCCCCeEEEEEeC
Confidence 111 11111 111112 22233556668888888887642 22211 1 001112334454431
Q ss_pred ccccCCCCHHHHHHHHHHC--CcccCCCCCCCCCEEEEEccCCCCHHHHHHHHHHHHHHH
Q 001586 912 LKNTAGIEPEDVAKRLMDY--GFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIR 969 (1049)
Q Consensus 912 ~~~~~g~~~~~v~k~L~~~--Gi~~~~~~~p~~~~lri~~t~~~t~eeid~fv~aL~~i~ 969 (1049)
.+.++.++.++|++. .|.++ .. .+.+.+-+-- ..++|++.+++.|.+++
T Consensus 412 ----~~~~~~~l~~~lr~~~~~i~~r-~~---~~~~~ld~r~-~~~~~~~~~~~~~~~~~ 462 (464)
T PRK04311 412 ----KDRSLEALAARLRLLPPPVIGR-IE---DGRLLLDLRT-LEEEDEERLAAALLEAL 462 (464)
T ss_pred ----CCCCHHHHHHHHhcCCCCEEEE-EE---CCEEEEEeCc-CCHHHHHHHHHHHHHHh
Confidence 246788999999863 33332 11 3666666543 46789999999998874
No 353
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.58 E-value=5.8e-13 Score=154.73 Aligned_cols=212 Identities=17% Similarity=0.194 Sum_probs=147.8
Q ss_pred HHHHHHHHHHHhCCCCcceEeccchHHHHHHHHHHhhhccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCcc---
Q 001586 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK--- 289 (1049)
Q Consensus 213 l~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a~~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~~~--- 289 (1049)
..++++.+|++.|.+. +.++.+|++++.+++ +. .. +||+||+++..|+++...+...++.+|++++.++..
T Consensus 52 ~~~Le~~lA~l~g~~~--~~~~~sG~aai~~~~-~~-l~--~Gd~Viv~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~ 125 (377)
T PRK07671 52 RAALEELIAVLEGGHA--GFAFGSGMAAITAVM-ML-FS--SGDHVILTDDVYGGTYRVMTKVLNRFGIEHTFVDTSNLE 125 (377)
T ss_pred HHHHHHHHHHHhCCCc--eEEeCCHHHHHHHHH-HH-hC--CCCEEEECCCccchHHHHHHHHHhcCCeEEEEECCCCHH
Confidence 4567789999999876 466788887766543 22 22 789999999999988887766667789999998764
Q ss_pred hhhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCCC
Q 001586 290 DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYG 366 (1049)
Q Consensus 290 ~l~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~p~~~GaDivvgs~-k~lg~P~~~G 366 (1049)
++++ ++++|++|++++| |++|.+.|+++|+++||++|++++|+ +..+.+....|.++|+||+++|. |.|++|.+
T Consensus 126 ~l~~ai~~~tklV~le~P~NPtg~~~dl~~I~~la~~~g~~lvvD-~a~~~~~~~~p~~~g~Divv~S~sK~l~G~~~-- 202 (377)
T PRK07671 126 EVEEAIRPNTKAIYVETPTNPLLKITDIKKISTIAKEKGLLTIVD-NTFMTPYWQSPISLGADIVLHSATKYLGGHSD-- 202 (377)
T ss_pred HHHHhcCCCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEE-CCCCccccCChhhhCCeEEEecCcccccCCcc--
Confidence 4555 7889999999998 78999999999999999999999995 34454555567789999999998 77764421
Q ss_pred CCceEEEEEch-hHHhcCCCceeeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcchHHH
Q 001586 367 GPHAAFLATSQ-EYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKT 445 (1049)
Q Consensus 367 GP~~G~l~~~~-~l~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irrekaTsni~t~~~l~a~~aa~y~~~~g~~Gl~~ 445 (1049)
-.+|++.+++ ++.+++. ..|..-+ .. ..+. ..|+...|.+-+..
T Consensus 203 -~~~G~~v~~~~~l~~~~~-------------------------~~~~~~g--~~--~~~~-----~a~l~~~~l~tl~~ 247 (377)
T PRK07671 203 -VVAGLVVVNSPELAEDLH-------------------------FVQNSTG--GI--LGPQ-----DSWLLLRGLKTLGI 247 (377)
T ss_pred -ceeEEEEeCcHHHHHHHH-------------------------HHHHhhc--CC--CCHH-----HHHHHHcCcChHHH
Confidence 1246666643 4433320 0000000 00 0111 11233444555666
Q ss_pred HHHHHHHHHHHHHHHhhcCCCeE
Q 001586 446 IAQRVHGLAGTFALGLKKLGTVE 468 (1049)
Q Consensus 446 ia~~~~~~a~~l~~~L~~~g~~~ 468 (1049)
..++..+++..|.+.|++..++.
T Consensus 248 R~~~~~~na~~la~~L~~~~~v~ 270 (377)
T PRK07671 248 RMEEHETNSRAIAEFLNNHPAVN 270 (377)
T ss_pred HHHHHHHHHHHHHHHHHcCCCee
Confidence 67777899999999999875453
No 354
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.58 E-value=7.5e-13 Score=156.12 Aligned_cols=288 Identities=14% Similarity=0.200 Sum_probs=181.4
Q ss_pred HHHHHHHHHhhCC---CccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEE-EcCCCCCccHHHHHhcCC--------
Q 001586 635 NNLGEWLCTITGF---DSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGM-------- 702 (1049)
Q Consensus 635 ~el~~~la~l~G~---~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VL-ip~saHg~~pa~a~~~G~-------- 702 (1049)
.++.+.|++++.. +. .++.+||+++++++++.+|.|. +|++|| ...+.||....+....|.
T Consensus 86 ~~la~~l~~~~p~~~~~~-~~f~~sGseA~e~AlklAr~~t------gr~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~ 158 (421)
T PRK06777 86 VTLAERINALAPIDGPAK-TAFFTTGAEAVENAVKIARAYT------GRPGVIAFGGAFHGRTLLTMALTGKVAPYKVGF 158 (421)
T ss_pred HHHHHHHHHhCCCCCCce-EEEeCCcHHHHHHHHHHHHHhh------CCCeEEEEcCCcCCccHHHHhhcCCCcccccCC
Confidence 4677888888753 33 4567899999999999888762 345566 678899988766543331
Q ss_pred -----EEEEEcCCCC--C---CCCHHHHHHHHHh--cCCCeEEEEEEcC-Cccccccc---cHHHHHHHHHHcCCEEEEe
Q 001586 703 -----KIVSVGTDAK--G---NINIEELRKAAEA--NRDNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGGQVYMD 766 (1049)
Q Consensus 703 -----~Vv~V~~d~~--g---~iD~~~L~~~i~~--~~~~taaV~it~P-n~~G~i~~---di~eI~~lah~~G~ll~vD 766 (1049)
.+..++.... + ..|++++++.+++ +.+++++|+++.. +..|+..+ .+++|.++|+++|+++++|
T Consensus 159 ~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~D 238 (421)
T PRK06777 159 GPFPGSIFHALYPNELHGVSVEEALSSVERLFKADIAPDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIAD 238 (421)
T ss_pred CCCCCCcEEcCCCccccCcCHHHHHHHHHHHHHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEe
Confidence 1223333211 1 1246778888864 3467888888754 34565432 4999999999999999999
Q ss_pred ccccccccCcCCCCc------c--CCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCC
Q 001586 767 GANMNAQVGLTSPGY------I--GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQP 838 (1049)
Q Consensus 767 ~A~~~a~~gl~~Pg~------~--GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~ 838 (1049)
+++. |+.+.|. + -+|++++ .|.+ + ||..+|++++++++.+.+.... +
T Consensus 239 Ev~t----g~gr~g~~~~~~~~~~~pDiv~~--sK~l----~-~G~pigav~~~~~i~~~~~~~~---------~----- 293 (421)
T PRK06777 239 EVQT----GFARTGKLFAMEYYDVKPDLITM--AKSL----G-GGMPISAVVGRAEVMDAPAPGG---------L----- 293 (421)
T ss_pred chhh----CCccCCchhhhhhcCCCCCEEee--ehhh----c-CCCceEEEEEcHHHHhccCCCC---------C-----
Confidence 9753 3433332 2 3687765 4766 3 4566888888888766542110 0
Q ss_pred CCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc---CCee--eccCCCceeeEEEEeccCcc
Q 001586 839 LGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRGLK 913 (1049)
Q Consensus 839 t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~---~~v~--~~g~~g~~~~e~iv~~~~~~ 913 (1049)
.+ ++.|+++.++++.+.|..+..+. ..++..++.++|.++|+++ +.++ ..| .|..+ .+.++.+.
T Consensus 294 ~~----T~~~~p~~~aaa~a~L~~~~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg-~G~~~-~i~~~~~~-- 362 (421)
T PRK06777 294 GG----TYAGNPLAVAAALAVLDVIAEEK---LCQRALILGAHLVEVLEKAKASCPAIVDIRA-RGSMV-AVEFNDPQ-- 362 (421)
T ss_pred CC----CCCcCHHHHHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHHHHHhCCCeEEecC-ceEEE-EEEEecCc--
Confidence 01 12245566666777777765544 3455567788999999875 2221 112 23222 22122111
Q ss_pred ccCCCC----HHHHHHHHHHCCcccCCC-CCCCCCEEEEEccCCCCHHHHHHHHHHHHHHH
Q 001586 914 NTAGIE----PEDVAKRLMDYGFHGPTM-SWPVPGTLMIEPTESESKEELDRYCDALISIR 969 (1049)
Q Consensus 914 ~~~g~~----~~~v~k~L~~~Gi~~~~~-~~p~~~~lri~~t~~~t~eeid~fv~aL~~i~ 969 (1049)
.+.+ ...+.+++.++|+.+... .+ ++.+|+.|....+++++|+.++.|.+.+
T Consensus 363 --~~~~~~~~~~~l~~~~~~~Gv~i~~~~~~--g~~lr~~ppl~i~~~~i~~~~~~l~~~l 419 (421)
T PRK06777 363 --TGKPSPEFTRQYQRQALEEGLLLLSCGVH--GNVIRFLYPLTIPDAQFSKALNILTRLL 419 (421)
T ss_pred --cCCccHHHHHHHHHHHHhCCeEEeecCCC--CCEEEEeCCCCCCHHHHHHHHHHHHHHH
Confidence 1111 234556677899987422 22 4789999999999999999999998765
No 355
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.58 E-value=2.8e-13 Score=160.12 Aligned_cols=289 Identities=16% Similarity=0.226 Sum_probs=174.9
Q ss_pred HHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEE-EcCCCCCccHHHHHhcC------------
Q 001586 635 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCG------------ 701 (1049)
Q Consensus 635 ~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VL-ip~saHg~~pa~a~~~G------------ 701 (1049)
.++.+.|+++++-....++.++|+++++++++++|.|. +|++|| ...+.||.......+.+
T Consensus 91 ~~lae~l~~~~~~~~~v~~~~sGseA~e~Alk~ar~~~------gr~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~ 164 (423)
T TIGR00713 91 ILLAKEIISRVPSVEMVRFVNSGTEATMSAVRLARGYT------GRDKIIKFEGCYHGHHDALLVKAGSGAATLGLPTSP 164 (423)
T ss_pred HHHHHHHHHhCCcccEEEEeCCHHHHHHHHHHHHHHhh------CCCEEEEEcCCCCCChhhhhccccCcccccCCCCCC
Confidence 47778888877543335778999999999999888762 346676 46678886543322111
Q ss_pred -------CEEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEE-cCCccccccc---cHHHHHHHHHHcCCEEEEecccc
Q 001586 702 -------MKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVT-YPSTHGVYEE---GIDEICKIIHDNGGQVYMDGANM 770 (1049)
Q Consensus 702 -------~~Vv~V~~d~~g~iD~~~L~~~i~~~~~~taaV~it-~Pn~~G~i~~---di~eI~~lah~~G~ll~vD~A~~ 770 (1049)
..+..+|. .|+++|+++++++.+++++|+++ .|+..|.+.+ .+++|.++|++||+++++|+++.
T Consensus 165 ~~~~~~~~~~~~~~~-----~d~~~l~~~i~~~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~ 239 (423)
T TIGR00713 165 GVPEDFAKLTLVLPY-----NDLEALEEVFEEYGEEIAGVIVEPVAGNMGVVPPKPEFLAGLRALTEEYGSLLIFDEVMT 239 (423)
T ss_pred CCCcccccceEEeCC-----CCHHHHHHHHHHcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEcccc
Confidence 01222222 38999999998665788999886 5666787753 28999999999999999999853
Q ss_pred ccccCcCCCC--------ccCCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCC
Q 001586 771 NAQVGLTSPG--------YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTI 842 (1049)
Q Consensus 771 ~a~~gl~~Pg--------~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i 842 (1049)
++ +.| ...+|++++ .|.+ + +|..+|++++++++.+.+... +. . ..
T Consensus 240 ----g~-r~g~~~~~~~~~~~pDi~t~--sK~l----~-~G~pig~v~~~~~i~~~~~~~--~~---------~----~~ 292 (423)
T TIGR00713 240 ----GF-RVALGGAQEYFGVEPDLTTL--GKII----G-GGLPVGAFGGRREIMERLAPE--GP---------V----YQ 292 (423)
T ss_pred ----cc-ccCcchhHHHhCCCcchhhh--hhhh----c-CCCceeeeeEHHHHHHhhCcC--CC---------e----ee
Confidence 33 111 123576543 5766 3 456688999998877665310 00 0 00
Q ss_pred CccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc---CCee--eccCCCceeeEEEEeccCccc---
Q 001586 843 AAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRGLKN--- 914 (1049)
Q Consensus 843 ~sa~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~---~~v~--~~g~~g~~~~e~iv~~~~~~~--- 914 (1049)
.+++.+++..++++.+.|..+..+++.+. ..++.+++++.|++. +.+. ..+. +.. ..+.++.+..+.
T Consensus 293 ~~T~~~~~~~~aaa~a~l~~~~~~~~~~~---~~~~~~~~~~~l~~~~~~~~~~~~v~~~-g~~-~~v~~~~~~~~~~~~ 367 (423)
T TIGR00713 293 AGTLSGNPLAMAAGLATLKLLDEEGVYTE---LDELAKRLAEGLSEVLEDTGIPHTVNRV-GSM-FSLFFTEEEVTNYAD 367 (423)
T ss_pred ccCCCCCHHHHHHHHHHHHHHhcccHHHH---HHHHHHHHHHHHHHHHHhcCCCeEEEee-ccE-EEEEEecCCCCChhh
Confidence 01122355666667777877765554433 333444555555432 2221 1221 222 122233211100
Q ss_pred cCCCC---HHHHHHHHHHCCcccCCCCCCCCCEEEEEccCCCCHHHHHHHHHHHHHHHHH
Q 001586 915 TAGIE---PEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREE 971 (1049)
Q Consensus 915 ~~g~~---~~~v~k~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~eeid~fv~aL~~i~~~ 971 (1049)
....+ ...+.++|.++|+.+....+ +.+++++. .|++|||++++.|.+++.+
T Consensus 368 ~~~~~~~~~~~~~~~l~~~Gv~v~~~~~---~~~~l~~~--~t~~~i~~~~~~l~~~l~~ 422 (423)
T TIGR00713 368 AKKSDTELFAKFFHEMLDKGVFLPPSQF---EACFLSAA--HTEEDIENTIEAAEEVFAE 422 (423)
T ss_pred hhcccHHHHHHHHHHHHHCCeEEecCCc---cceeeECC--CCHHHHHHHHHHHHHHHhh
Confidence 00011 23678889999998764332 45788775 6899999999999887754
No 356
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.58 E-value=1.9e-13 Score=160.90 Aligned_cols=295 Identities=18% Similarity=0.165 Sum_probs=179.9
Q ss_pred HHHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHH----HHhcCCEEEEEcC
Q 001586 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGT 709 (1049)
Q Consensus 634 i~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~----a~~~G~~Vv~V~~ 709 (1049)
..++++.++++.|.+.+ +..++|..|+.++++++. .++++||++.+.|+..... +...|++++.++
T Consensus 71 ~~~Le~~lA~l~g~~~a-v~~sSG~aAi~~al~all--------~~Gd~Vv~~~~~y~~t~~~~~~~l~~~Gi~v~~vd- 140 (436)
T PRK07812 71 QDVVEQRIAALEGGVAA-LLLASGQAAETFAILNLA--------GAGDHIVSSPRLYGGTYNLFHYTLPKLGIEVSFVE- 140 (436)
T ss_pred HHHHHHHHHHHhCCCeE-EEEccHHHHHHHHHHHHh--------CCCCEEEEeCCcchHHHHHHHHHhhcCeEEEEEEC-
Confidence 34788999999998774 556677777655554432 2568899888766543322 344788888886
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CccccccccHHHHHHHHHHcCCEEEEeccccccccCcCCCCccCCcEEE
Q 001586 710 DAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1049)
Q Consensus 710 d~~g~iD~~~L~~~i~~~~~~taaV~it~P-n~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~Pg~~GaDi~~ 788 (1049)
+. .|+++++++++ ++|++|+++.| |.+|.+. |+++|+++||++|++++||+++.. +.+..|-++|+|+++
T Consensus 141 d~---~d~e~l~~ai~---~~tklV~ie~~sNp~G~v~-Dl~~I~~la~~~gi~liVD~t~a~--~~~~~pl~~GaDivv 211 (436)
T PRK07812 141 DP---DDLDAWRAAVR---PNTKAFFAETISNPQIDVL-DIPGVAEVAHEAGVPLIVDNTIAT--PYLIRPLEHGADIVV 211 (436)
T ss_pred CC---CCHHHHHHhCC---CCCeEEEEECCCCCCCeec-CHHHHHHHHHHcCCEEEEECCCcc--cccCCchhcCCCEEE
Confidence 22 38999999987 78999999999 4689998 899999999999999999998643 233567788999999
Q ss_pred eCCCcccccCCCCCCCc--eeEEEEc-ccccccCCCCccccCCCCCCCC---------------C---CCCCCCCCccch
Q 001586 789 LNLHKTFCIPHGGGGPG--MGPIGVK-KHLAPFLPSHPVVSTGGIPAPE---------------K---SQPLGTIAAAPW 847 (1049)
Q Consensus 789 ~s~hK~f~~P~g~GGPg--~G~i~~~-~~l~~~lpg~~vg~t~~~~~~~---------------~---~~~t~~i~sa~~ 847 (1049)
.|+||+++ |+| +|.+++. ..+...-+....-.+.+...+. + ....+..-
T Consensus 212 ~S~tK~lg------g~G~~i~G~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l---- 281 (436)
T PRK07812 212 HSATKYLG------GHGTAIAGVIVDGGTFDWTQGRFPGFTTPDPSYHGVVFAELGPPAYALKARVQLLRDLGSAI---- 281 (436)
T ss_pred EecccccC------CCCCeEEEEEEcCCccccccccccccccCCcccccchhhhcchhHHHHHHHHHHHHhcCCCC----
Confidence 99999985 333 3334443 2211000000000000000000 0 00011111
Q ss_pred hhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhccCC---eeeccCCCceeeEEEEeccCccccCCCCHHHHH
Q 001586 848 GSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYP---ILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVA 924 (1049)
Q Consensus 848 g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~~~---v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~ 924 (1049)
..--+|+...|-+.|..+.++..++|..+++.|+++.. |.|+|.. ..+..+++
T Consensus 282 ------~p~~a~l~~rgl~tL~~R~~~~~~nA~~la~~L~~~p~v~~V~yPgl~------------------s~p~~~~~ 337 (436)
T PRK07812 282 ------SPFNAFLIAQGLETLSLRIERHVANAQRVAEFLEARDEVASVNYAGLP------------------SSPWYERA 337 (436)
T ss_pred ------CHHHHHHHhcCcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCC------------------CCccHHHH
Confidence 01234567778888888999999999999999998732 3343210 11234556
Q ss_pred HHHHHCCcccCCCCCCCCCEEEEEccCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCccccccchh
Q 001586 925 KRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKVTCLFLHHGYF 999 (1049)
Q Consensus 925 k~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~eeid~fv~aL~~i~~~i~~i~~g~~~~~~~~l~~~ph~~~~~~~ 999 (1049)
++....|+ ++.+-|.+ ..+.++..+|++.|+-+. ...++ | +...|...|..+.++.+
T Consensus 338 ~~~~~~g~---------gg~~sf~l--~~~~~~~~~f~~~l~l~~-~a~sl--G----~~~sLi~~p~~~~h~~~ 394 (436)
T PRK07812 338 KRLAPKGT---------GAVLSFEL--AGGVEAGKAFVNALTLHS-HVANI--G----DVRSLVIHPASTTHSQL 394 (436)
T ss_pred HHhCcCCC---------ceEEEEEe--cCCHHHHHHHHHhCCcce-Eeccc--C----CCcceeeCCCCCCcccC
Confidence 55433331 23333333 235666778888776321 11121 2 45566666666555443
No 357
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.58 E-value=1.1e-13 Score=160.59 Aligned_cols=216 Identities=18% Similarity=0.125 Sum_probs=146.4
Q ss_pred HHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHH----HHhcCCEEEEEcCC
Q 001586 635 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGTD 710 (1049)
Q Consensus 635 ~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~----a~~~G~~Vv~V~~d 710 (1049)
.++++.++++.|.+.+ +..+||..|..++++++. +++|+||+++..++..... ....|++++.++.+
T Consensus 53 ~~lE~~lA~l~g~~~~-~~~~sG~~Ai~~al~all--------~~GD~Vl~~~~~y~~t~~~~~~~~~~~gi~v~~~d~~ 123 (377)
T TIGR01324 53 FALQDAMCELEGGAGC-YLYPSGLAAVTNSILAFV--------KAGDHVLMVDSAYEPTRYFCDIVLKRMGVDITYYDPL 123 (377)
T ss_pred HHHHHHHHHHhCCCcE-EEECcHHHHHHHHHHHhc--------CCCCEEEEcCCCcHHHHHHHHHHHHhcCcEEEEECCC
Confidence 3688999999998764 445667666655544431 2578899887655433222 34578898887652
Q ss_pred CCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-ccccccccHHHHHHHHHHcCCEEEEeccccccccCcCCCCccCCcEEEe
Q 001586 711 AKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHL 789 (1049)
Q Consensus 711 ~~g~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~Pg~~GaDi~~~ 789 (1049)
+.++++++++ ++|++|++++|+ .+|.+. |+++|+++||++|++++||+++.. +.+..|.++|+|+++.
T Consensus 124 -----~~e~l~~~i~---~~tklV~lesp~Np~g~~~-dl~~I~~la~~~g~~livD~t~a~--g~~~~pl~~gaDivv~ 192 (377)
T TIGR01324 124 -----IGEDIATLIQ---PNTKVLFLEAPSSITFEIQ-DIPAIAKAARNPGIVIMIDNTWAA--GLLFKPLEHGVDISIQ 192 (377)
T ss_pred -----CHHHHHHhcC---CCceEEEEECCCCCCCcHH-HHHHHHHHHHHcCCEEEEECCCcc--ccccCccccCceEEEe
Confidence 2378988887 789999999995 688887 899999999999999999998753 3345688899999999
Q ss_pred CCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHH
Q 001586 790 NLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLT 869 (1049)
Q Consensus 790 s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~ 869 (1049)
|+||+++- .++-.+|+++.+++....+-.. .+..+..-+ | ..+|.. ..|.+-+.
T Consensus 193 S~tK~l~G---~~d~~gG~v~~~~~~~~~l~~~-------------~~~~G~~l~-p-------~~a~~~--~rgl~tl~ 246 (377)
T TIGR01324 193 AGTKYLVG---HSDIMIGTVVANARTWDQLREH-------------SYLMGQMVD-A-------DDAYTT--LRGLRTLG 246 (377)
T ss_pred cCceeccC---CCCceEEEEEeCHHHHHHHHHH-------------HHHhCCCCC-H-------HHHHHH--HhhhhhHH
Confidence 99999952 1223468888876544332100 000111111 1 123433 34445566
Q ss_pred HHHHHHHHHHHHHHHHHhcc---CCeeecc
Q 001586 870 EASKIAILNANYMAKRLEKH---YPILFRG 896 (1049)
Q Consensus 870 ~~~~~~~~~a~yL~~~L~~~---~~v~~~g 896 (1049)
.+.++..++|..+++.|+++ -++.|++
T Consensus 247 ~R~~~~~~~a~~la~~L~~~p~v~~v~yp~ 276 (377)
T TIGR01324 247 VRLKQHQESSLAIAKWLSEQPEVARVLHPA 276 (377)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCcCEEECCC
Confidence 67788889999999999876 3455554
No 358
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.58 E-value=4.2e-13 Score=155.08 Aligned_cols=228 Identities=18% Similarity=0.115 Sum_probs=152.8
Q ss_pred HHHHHHHHHHHhCCCCcceEeccchHHHHHHHHHHhhhccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEe-Ccchh
Q 001586 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVS-DLKDI 291 (1049)
Q Consensus 213 l~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a~~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v-~~~~l 291 (1049)
..++++.+|++.|.+ ++..+.+|++++.+++..+ . +||+||++...+......+.......++++.+. |++++
T Consensus 56 ~~~le~~lA~leg~~--~~v~~~sG~aAi~~~l~~l--~--~GD~VI~~~~~yg~~~~~~~~~~~~~~~~~~~~~d~~~l 129 (364)
T PRK07269 56 RAKLEETLAAIESAD--YALATSSGMSAIVLAFSVF--P--VGSKVVAVRDLYGGSFRWFNQQEKEGRFHFTYANTEEEL 129 (364)
T ss_pred HHHHHHHHHHHhCCC--eEEEeCCHHHHHHHHHHHh--C--CCCEEEEecCCcCchHHHHHHHHhcCcEEEEecCCHHHH
Confidence 345778999999865 4888999998877655332 3 899999999888777665544434446666553 45677
Q ss_pred hc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCCCCC
Q 001586 292 DY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGGP 368 (1049)
Q Consensus 292 ~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~p~~~GaDivvgs~-k~lg~P~~~GGP 368 (1049)
++ ++++|++|++.+| |++|.+.|+++|+++||++|++++|+ +.++.+....|-++|+||+++|. |.++++- .-
T Consensus 130 ~~~i~~~TklV~lesP~NPtg~~~di~~I~~la~~~gi~vvvD-~t~~~~~~~~pl~~gaDivv~S~tK~l~g~~---d~ 205 (364)
T PRK07269 130 IAAIEEDTDIVYIETPTNPLMVEFDIEKVAKLAHAKGAKVIVD-NTFYSPIYQRPIELGADIVLHSATKYLSGHN---DV 205 (364)
T ss_pred HHhcCcCceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEE-CCCcccccCCchhhCCcEEEecCceeccCCC---cc
Confidence 76 8889999999998 78999999999999999999999995 34455555677789999999998 7776432 11
Q ss_pred ceEEEEEch-hHHhcCCCceeeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcchHHHHH
Q 001586 369 HAAFLATSQ-EYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIA 447 (1049)
Q Consensus 369 ~~G~l~~~~-~l~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irrekaTsni~t~~~l~a~~aa~y~~~~g~~Gl~~ia 447 (1049)
-+|++++++ ++.+++- ..|...| .| .+++ .| |+...|-+-|....
T Consensus 206 ~gG~v~~~~~~l~~~~~-------------------------~~~~~~G---~~-~s~~---~a--~l~~~~L~tL~~r~ 251 (364)
T PRK07269 206 LAGVVVTNDLELYEKLF-------------------------YNLNTTG---AV-LSPF---DS--YLLMRGLKTLSLRM 251 (364)
T ss_pred cceEEEeCcHHHHHHHH-------------------------HHHHHhC---CC-CCHH---HH--HHHHcCCCcHHHHH
Confidence 235666653 3433220 0000011 11 0111 11 23455555677777
Q ss_pred HHHHHHHHHHHHHhhcCCCeE-EcCCCCcceEEEecCC
Q 001586 448 QRVHGLAGTFALGLKKLGTVE-VQGLPFFDTVKVKCAD 484 (1049)
Q Consensus 448 ~~~~~~a~~l~~~L~~~g~~~-v~~~~~~~~v~i~~~~ 484 (1049)
++..+++.++++.|++...+. ++-++....++|...+
T Consensus 252 ~~~~~na~~~a~~L~~~p~v~~v~ypg~gg~~sf~~~~ 289 (364)
T PRK07269 252 ERSTANAQEVVAFLKKSPAVKEVLYTGKGGMISFKVAD 289 (364)
T ss_pred HHHHHHHHHHHHHHHhCCCccEEeCCCcCcEEEEEECC
Confidence 888899999999999875443 3323333456666544
No 359
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.57 E-value=4.3e-13 Score=163.05 Aligned_cols=298 Identities=13% Similarity=0.104 Sum_probs=194.1
Q ss_pred HHHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCEEEEEcCCCC-
Q 001586 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK- 712 (1049)
Q Consensus 634 i~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~Vv~V~~d~~- 712 (1049)
+.|.|+..++++|.+.+-+..|++++|+.+++++.. +++++||+++.+|-+....+.+.|++.++++...+
T Consensus 197 i~eAe~~aA~~fgAd~tyfvvNGTS~~n~av~~a~~--------~~Gd~VLvdRN~HKSv~~aLilsga~PVYl~P~~n~ 268 (713)
T PRK15399 197 HLEAEEYIARTFGAEQSYIVTNGTSTSNKIVGMYAA--------PAGSTLLIDRNCHKSLAHLLMMSDVVPIWLKPTRNA 268 (713)
T ss_pred HHHHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHhc--------CCCCEEEeecccHHHHHHHHHHcCCeeEEecccccc
Confidence 779999999999999987888888888877777653 36789999999999888888999999999976532
Q ss_pred ----CCCCH-----HHHHHHHHhcCC--CeEEEEEEcCCccccccccHHHHHHHHHHcCCEE-EEeccccccccCcCC--
Q 001586 713 ----GNINI-----EELRKAAEANRD--NLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQV-YMDGANMNAQVGLTS-- 778 (1049)
Q Consensus 713 ----g~iD~-----~~L~~~i~~~~~--~taaV~it~Pn~~G~i~~di~eI~~lah~~G~ll-~vD~A~~~a~~gl~~-- 778 (1049)
|.++. +.++++|+++.+ +.+++++|+|++.|++. |+++|.+++ |+.+ +||+|+.. ...|..
T Consensus 269 ~Gi~g~I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~pTYdGi~y-d~~~I~~~~---g~~~ilvDEAhga-h~~F~p~~ 343 (713)
T PRK15399 269 LGILGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNSTYDGLLY-NTDWIKQTL---DVPSIHFDSAWVP-YTHFHPIY 343 (713)
T ss_pred cCCcCCCChhhccHHHHHHHHHhCCCcCCceEEEEECCCCCceee-CHHHHHHHh---CCCEEEEeccchh-hhhcCccc
Confidence 45666 999999987642 23689999999999998 899999998 6766 79998742 222211
Q ss_pred C------CccCCcEE---EeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCC-CCCCCccchh
Q 001586 779 P------GYIGADVC---HLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQP-LGTIAAAPWG 848 (1049)
Q Consensus 779 P------g~~GaDi~---~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~-t~~i~sa~~g 848 (1049)
| +.-|+|.+ +.|.||+++ +--..+.|-++.. +.-..+. .... ...++ ..|.
T Consensus 344 ~~~sam~~~~~aD~~i~~tQStHKtL~-----alTQaS~iHvk~~----vd~~~~n---------~a~~m~~STS-PsY~ 404 (713)
T PRK15399 344 QGKSGMSGERVPGKVIFETQSTHKMLA-----AFSQASLIHIKGE----YDEETFN---------EAFMMHTSTS-PSYP 404 (713)
T ss_pred CCcChhhCCCCCCeeeeeeeehhcccc-----ccchheeeeecCC----CCHHHHH---------HHHHHHcCCC-cHHH
Confidence 1 11257888 999999985 2123455655432 1100000 0000 01111 1222
Q ss_pred hHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhccC--------Ceeec-------------cCC---------
Q 001586 849 SALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHY--------PILFR-------------GVN--------- 898 (1049)
Q Consensus 849 ~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~~--------~v~~~-------------g~~--------- 898 (1049)
....+-.+.++|. |..| ++..+..++.+..++++|.++. ++.-+ +..
T Consensus 405 LmASLD~a~~~m~--~~~G-~~l~~~~i~~a~~fR~~l~~~~~~~~~w~f~~~~~~~~~~~~~w~l~p~~~whgf~~~~~ 481 (713)
T PRK15399 405 IVASVETAAAMLR--GNPG-KRLINRSVERALHFRKEVQRLREESDGWFFDIWQPENVDEAECWPVAPGEQWHGFKDADA 481 (713)
T ss_pred HHHHHHHHHHHHH--hhhh-HHHHHHHHHHHHHHHHHHHhccccccCceeeecCccccCCccceecCCCccccccccccc
Confidence 2222233333333 2234 3355666777778888886532 22100 000
Q ss_pred -----CceeeEEEEeccCcc-----ccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEccCCCCHHHHHHHHHHHHHH
Q 001586 899 -----GTVAHEFIVDLRGLK-----NTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISI 968 (1049)
Q Consensus 899 -----g~~~~e~iv~~~~~~-----~~~g~~~~~v~k~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~eeid~fv~aL~~i 968 (1049)
+|. -+++.++.+. ...|+++..+.+.|.++||.+-... ...+++.++...|++++++++++|.++
T Consensus 482 ~~~~lDP~--KltI~t~g~~~~g~~~~~Gi~g~~l~~~L~e~gI~~E~~d---~~~vL~l~s~g~t~~~~~~L~~aL~~f 556 (713)
T PRK15399 482 DHMFLDPV--KVTILTPGMDEQGNMSEEGIPAALVAKFLDERGIVVEKTG---PYNLLFLFSIGIDKTKAMGLLRGLTEF 556 (713)
T ss_pred ccccCCCc--eEEEEecCcccccccccCCCCHHHHHHHHHHcCCEEEecC---CCeEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 111 1222222110 0237889999999999999875433 478888899999999999999999988
Q ss_pred HHH
Q 001586 969 REE 971 (1049)
Q Consensus 969 ~~~ 971 (1049)
.+.
T Consensus 557 ~~~ 559 (713)
T PRK15399 557 KRA 559 (713)
T ss_pred HHh
Confidence 554
No 360
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.57 E-value=2.1e-13 Score=157.91 Aligned_cols=275 Identities=16% Similarity=0.132 Sum_probs=168.2
Q ss_pred HHHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHH----HHhcCCEEEEEcC
Q 001586 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGT 709 (1049)
Q Consensus 634 i~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~----a~~~G~~Vv~V~~ 709 (1049)
..++++.++++.+ + ..+..++|+.+..+++.++ . +++++||++...++..... +...|++++.++.
T Consensus 53 ~~~Le~~lA~l~~-~-~~v~~~sG~~Ai~~~l~al---l-----~~Gd~Vl~~~~~y~~~~~~~~~~l~~~G~~v~~v~~ 122 (366)
T PRK07582 53 WRALEAALGELEG-A-EALVFPSGMAAITAVLRAL---L-----RPGDTVVVPADGYYQVRALAREYLAPLGVTVREAPT 122 (366)
T ss_pred HHHHHHHHHHHcC-C-CEEEECCHHHHHHHHHHHh---c-----CCCCEEEEeCCCcHhHHHHHHHHHhcCeEEEEEECC
Confidence 3467888999883 2 3455677776664443332 1 2568899876555333222 2347999999997
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-ccccccccHHHHHHHHHHcCCEEEEeccccccccCcCCCCccCCcEEE
Q 001586 710 DAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1049)
Q Consensus 710 d~~g~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~Pg~~GaDi~~ 788 (1049)
++++ + .+. +++++|++++|+ .+|.+. |+++|+++||++|++++||+++.... ...|.++|+|+++
T Consensus 123 ~~~~-------~-~~~---~~t~lV~le~p~NPtg~v~-di~~I~~~a~~~g~~lvVD~t~~~~~--~~~p~~~g~Divv 188 (366)
T PRK07582 123 AGMA-------E-AAL---AGADLVLAETPSNPGLDVC-DLAALAAAAHAAGALLVVDNTTATPL--GQRPLELGADLVV 188 (366)
T ss_pred CChH-------H-Hhc---cCceEEEEECCCCCCCCcc-CHHHHHHHHHHcCCEEEEECCCCCcc--ccCchhcCCcEEE
Confidence 5321 1 222 688999999995 578776 79999999999999999999864222 2357778999999
Q ss_pred eCCCcccccCCCCCCCceeEEEEc-ccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhh
Q 001586 789 LNLHKTFCIPHGGGGPGMGPIGVK-KHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (1049)
Q Consensus 789 ~s~hK~f~~P~g~GGPg~G~i~~~-~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eG 867 (1049)
.|+||+++- .+|-.+|+++++ +.+.+.+... + ..++. +.+++ .+| +...|-+-
T Consensus 189 ~S~sK~l~G---~~g~~~G~v~~~~~~l~~~l~~~------------~-~~~g~-~~~~~-------~a~--l~~r~l~t 242 (366)
T PRK07582 189 ASDTKALTG---HSDLLLGYVAGRDPELMAAVERW------------R-LLAGA-IPGPF-------EAW--LAHRSLGT 242 (366)
T ss_pred ecccccccC---CCCeeEEEEEcCcHHHHHHHHHH------------H-HHhCC-CCCHH-------HHH--HHHhcccc
Confidence 999999841 122336988875 4444433100 0 00111 11111 123 34444455
Q ss_pred HHHHHHHHHHHHHHHHHHHhcc---CCeeeccCC-Cc-----------eeeEEEEeccCccccCCCCHHHHHHHHHHCCc
Q 001586 868 LTEASKIAILNANYMAKRLEKH---YPILFRGVN-GT-----------VAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGF 932 (1049)
Q Consensus 868 l~~~~~~~~~~a~yL~~~L~~~---~~v~~~g~~-g~-----------~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi 932 (1049)
+..+.++..+++..+++.|+++ -.|.|+|.. .+ ....+.|++. +.+++.+.|...++
T Consensus 243 l~~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~gg~~s~~~~--------~~~~~~~~~~~l~~ 314 (366)
T PRK07582 243 LGLRFARQCANALAVAELLAGHPAVRGVRYPGLPGDPAHEVAARQMRRFGGLVSFELA--------DAAAAERFVAASRL 314 (366)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHhhCCCCcceEEEEeC--------CHHHHHHHHHhCCc
Confidence 6667788889999999999986 235565521 11 1223344432 34555566655565
Q ss_pred ccCCCCC---------C------C-CCEEEEEccCCCCHHHHHHHHHHHH
Q 001586 933 HGPTMSW---------P------V-PGTLMIEPTESESKEELDRYCDALI 966 (1049)
Q Consensus 933 ~~~~~~~---------p------~-~~~lri~~t~~~t~eeid~fv~aL~ 966 (1049)
.....+| + + .+.+|+|+.....++.|+.|.++|.
T Consensus 315 ~~~~~s~G~~~sl~~~~~~~~~~~~~~liR~svGlE~~~dli~dl~~al~ 364 (366)
T PRK07582 315 VVAATSFGGVHTSADRRARWGDAVPEGFVRLSCGIEDTDDLVADLERALD 364 (366)
T ss_pred ceecccCCCccchhhhHHHcCCCCCCCeEEEEeccCCHHHHHHHHHHHHh
Confidence 4321111 0 1 3679999987766666666666664
No 361
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.57 E-value=4.8e-13 Score=143.90 Aligned_cols=306 Identities=19% Similarity=0.191 Sum_probs=192.0
Q ss_pred HHHHHHHHHHHHhhCCCcccc-ccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHH-----HHhcCCEEE
Q 001586 632 EMFNNLGEWLCTITGFDSFSL-QPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT-----AAMCGMKIV 705 (1049)
Q Consensus 632 ~~i~el~~~la~l~G~~~~~l-~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~-----a~~~G~~Vv 705 (1049)
.+-..+-.+|+-|.|.....+ ..++++--.+..|.+ .|+. ..++.||+++...+-..-+ +.+.|..
T Consensus 76 ~lp~~lgdklApLiGA~~~Evvv~dtts~nl~k~L~a--alr~----~~~r~vIv~E~~~fpTdly~a~g~~~~~~~~-- 147 (407)
T COG3844 76 DLPERLGDKLAPLIGARAGEVVVTDTTSINLFKVLAA--ALRP----QEGRRVIVSEGDNFPTDLYIAEGLADLLGIG-- 147 (407)
T ss_pred hchhHHHHHhhhhhcCCCCceEEeCCcchHHHHHHHH--Hhcc----CCCceEEeecCCCCCcchhhhcchhhhhccc--
Confidence 334456678999999876433 333443322333332 2221 1245677776532211112 2333322
Q ss_pred EEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCCc-cccccccHHHHHHHHHHcCCEEEEeccccccccCcCCCCccCC
Q 001586 706 SVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPST-HGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGA 784 (1049)
Q Consensus 706 ~V~~d~~g~iD~~~L~~~i~~~~~~taaV~it~Pn~-~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~Pg~~Ga 784 (1049)
.+-.+.+++++++++++ ++++.|+++..|+ +|-.- |+.+|.+++|++|+++..|=||..+...+ .-...|+
T Consensus 148 ---~~~~~~~~P~~~~~~~~---dd~AvV~L~~V~y~TGql~-dm~aiT~~AH~~galv~wDLAHsaGavp~-~Lh~~ga 219 (407)
T COG3844 148 ---YDLEGVIAPRALEEAIT---DDVAVVLLSHVNYKTGQLL-DMRAITALAHQHGALVGWDLAHSAGAVPV-DLHAAGA 219 (407)
T ss_pred ---ccceeeeChHHHHHhhc---cceEEEEecccccccccee-eHHHHHHHHHhcCceEEeehhcccCCcce-eecccCC
Confidence 33346678899999998 9999999999997 89887 89999999999999999998875443332 2356799
Q ss_pred cEEEeCCCcccccCCCCCCCce-eEEEEccc-ccccCCCCccccCC--CCCCCCCC-CCCC----CCCccchhhHHHHHH
Q 001586 785 DVCHLNLHKTFCIPHGGGGPGM-GPIGVKKH-LAPFLPSHPVVSTG--GIPAPEKS-QPLG----TIAAAPWGSALILPI 855 (1049)
Q Consensus 785 Di~~~s~hK~f~~P~g~GGPg~-G~i~~~~~-l~~~lpg~~vg~t~--~~~~~~~~-~~t~----~i~sa~~g~~~~~~~ 855 (1049)
|+.+.+.||.+. ||||. +++++.++ ..+..|... |+-+ +.+.-... .+.+ -.|+++ +...+++
T Consensus 220 DfaigcsyKYLN-----gGPGapa~l~v~~~h~e~~~~~ls-gW~gha~pf~m~~~y~p~~ga~rf~~gt~--~V~s~aa 291 (407)
T COG3844 220 DFAIGCSYKYLN-----GGPGAPAGLFVAPRHRERSWPPLS-GWWGHARPFAMEEVYAPGPGARRFLCGTQ--PVLSLAA 291 (407)
T ss_pred Ceeeeeeceecc-----CCCCCceeEEeccccccccccccc-cccCCCCcchhhhccCcCccccceeeCCc--chhhhHH
Confidence 999999999995 89964 77777754 334444222 2211 00000000 0001 112221 1112222
Q ss_pred HHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc---CCeeeccCCCc--eeeEEEEeccCccccCCCCHHHHHHHHHHC
Q 001586 856 SYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPILFRGVNGT--VAHEFIVDLRGLKNTAGIEPEDVAKRLMDY 930 (1049)
Q Consensus 856 a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~---~~v~~~g~~g~--~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~ 930 (1049)
--..|.....-++.+..++++.+++|+.+.++.. |.+....+... .-..+.+..+ ..+.|++.|.++
T Consensus 292 l~~aLDifa~~~i~~lR~kSlaLTd~fieLvEa~~~~~~l~l~tPr~~~~rGsqvS~~hp--------~~~~V~qaLi~r 363 (407)
T COG3844 292 LEGALDIFADVDITELRKKSLALTDYFIELVEARCEYYGLTLVTPRAHEERGSQVSLYHP--------HGYQVMQALIDR 363 (407)
T ss_pred HhhhhhhhhhcCHHHHHHhhhHHHHHHHHHHHhccccCCcEEeccchhhhccceeeEecC--------cHHHHHHHHHHc
Confidence 3445666777788888899999999999999875 23322222111 1112333332 578999999999
Q ss_pred CcccCCCCCCCCCEEEEEccC-CCCHHHHHHHHHHHHHHHHHH
Q 001586 931 GFHGPTMSWPVPGTLMIEPTE-SESKEELDRYCDALISIREEI 972 (1049)
Q Consensus 931 Gi~~~~~~~p~~~~lri~~t~-~~t~eeid~fv~aL~~i~~~i 972 (1049)
|+..- +..++.||+.||+ +++-.||-..+++|.+++++.
T Consensus 364 GVigD---~R~P~vlRfgftPlY~~~~DVw~AV~~L~evL~t~ 403 (407)
T COG3844 364 GVIGD---FREPDVLRFGFTPLYVSFVDVWDAVDALEEVLDTL 403 (407)
T ss_pred Ccccc---ccCCCeeeecCccceechhHHHHHHHHHHHHHHhh
Confidence 99763 3336999999996 788899999999999998764
No 362
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.57 E-value=1.1e-12 Score=156.00 Aligned_cols=298 Identities=16% Similarity=0.240 Sum_probs=185.7
Q ss_pred HHHHHHHHHHHhhCCC----ccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEE-EcCCCCCccHHHHHhcC------
Q 001586 633 MFNNLGEWLCTITGFD----SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCG------ 701 (1049)
Q Consensus 633 ~i~el~~~la~l~G~~----~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VL-ip~saHg~~pa~a~~~G------ 701 (1049)
...++.+.|+++++.. ...++.+||+++++++++.+|.| . +|++|| ...++||....+....|
T Consensus 102 ~~~~lAe~L~~~~p~~~~~~~~~f~~~SGsEAve~AlklAr~~---t---gr~~Ii~~~~~yHG~t~~als~t~~~~~~~ 175 (459)
T PRK06931 102 LKDAFSEYLLSLLPGQGKEYCLQFTGPSGADAVEAAIKLAKTY---T---GRSNVISFSGGYHGMTHGALAVTGNLSPKN 175 (459)
T ss_pred HHHHHHHHHHHhCCCccccceEEEeCCCcHHHHHHHHHHHHHh---c---CCCeEEEECCCcCCccHHHHhhcCCccccc
Confidence 3457888899988532 12466699999999999999887 2 355666 67889998876643211
Q ss_pred ------CEEEEEcCCCCC--------CCCHHHH----HHHHHh---cCCCeEEEEEEcC-Cccccccc---cHHHHHHHH
Q 001586 702 ------MKIVSVGTDAKG--------NINIEEL----RKAAEA---NRDNLSTLMVTYP-STHGVYEE---GIDEICKII 756 (1049)
Q Consensus 702 ------~~Vv~V~~d~~g--------~iD~~~L----~~~i~~---~~~~taaV~it~P-n~~G~i~~---di~eI~~la 756 (1049)
-.+..+|..... .-|.+.+ ++.+++ ..+++++|+++.. ...|++.+ .++++.++|
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc 255 (459)
T PRK06931 176 AVNGLMPGVQFMPYPHEYRCPLGIGGEAGVKALTYYFENFIEDVESGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVT 255 (459)
T ss_pred CCCCCCCCcEEeCCCccccccccCCchhHHHHHHHHHHHHHHhhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHH
Confidence 124445543211 1123333 333331 2346899988754 34566642 499999999
Q ss_pred HHcCCEEEEeccccccccCcCCCCcc--------CCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCC
Q 001586 757 HDNGGQVYMDGANMNAQVGLTSPGYI--------GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTG 828 (1049)
Q Consensus 757 h~~G~ll~vD~A~~~a~~gl~~Pg~~--------GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~ 828 (1049)
+++|+++++|++ +.|+.+.|.+ -+|++++ .|.+ ++|-| +|.++.++++ ..+...
T Consensus 256 ~~~g~LlI~DEV----~tGfGRtG~~~a~~~~gv~PDivt~--gK~l----~gG~P-i~av~~~~~~-~~~~~~------ 317 (459)
T PRK06931 256 QKHGILLIVDEV----QAGFARTGKMFAFEHAGIEPDIIVM--SKAV----GGGLP-LAVLGIKKEF-DAWQPG------ 317 (459)
T ss_pred HHcCCEEEEecc----hhcCCcCchHHHhhhcCCCCCEEEe--cccc----cCCcc-eeeeeeHHHH-hhccCC------
Confidence 999999999987 5667666643 3699887 4766 44545 5556666654 222100
Q ss_pred CCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc---CCee--eccCCCceee
Q 001586 829 GIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAH 903 (1049)
Q Consensus 829 ~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~---~~v~--~~g~~g~~~~ 903 (1049)
...+++.|+++.++++.+.|..+..+++. ++.....++|.++|+++ +.++ ..|. |. +.
T Consensus 318 ------------~~~~T~~gnpla~aaala~L~~l~~~~l~---~~~~~~G~~l~~~L~~l~~~~~~i~~vrG~-Gl-m~ 380 (459)
T PRK06931 318 ------------GHTGTFRGNQLAMATGLTTLKILKEENLA---QNAAERGEWLKAQLAELQKRYPCIGNVRGR-GL-MI 380 (459)
T ss_pred ------------CCCCCCCCCHHHHHHHHHHHHHHHhCCHH---HHHHHHHHHHHHHHHHHHHhCCCeEeEecC-ce-EE
Confidence 00112446778888888999988777654 44556778888888764 3322 1221 32 21
Q ss_pred EEEEeccC-cc-----ccC-CCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEccCCCCHHHHHHHHHHHHHHHHHH
Q 001586 904 EFIVDLRG-LK-----NTA-GIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEI 972 (1049)
Q Consensus 904 e~iv~~~~-~~-----~~~-g~~~~~v~k~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~eeid~fv~aL~~i~~~i 972 (1049)
.+-+..+. .+ ... ..-...+.+.+.++|+.+.... ..++++++.|+...|++|||.++++|.+++.++
T Consensus 381 giel~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~-~~~~~l~~~Ppl~it~~eid~~~~~l~~~l~~~ 455 (459)
T PRK06931 381 GIEIVDERQPADAMGSYPADGELAAAIQKACFENGLLLERGG-RNGNVVRLLPPLLITQAECEEFIDRFEQALLAA 455 (459)
T ss_pred EEEEccCcccccccccCCccHHHHHHHHHHHHHCCcEEeecC-CCCCEEEEECCCCcCHHHHHHHHHHHHHHHHHH
Confidence 12121110 00 000 0013467778889999874321 114789999999999999999999999988663
No 363
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.57 E-value=2.4e-13 Score=159.40 Aligned_cols=212 Identities=19% Similarity=0.203 Sum_probs=145.9
Q ss_pred HHHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHH----HHHhcCCEEEEEcC
Q 001586 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA----TAAMCGMKIVSVGT 709 (1049)
Q Consensus 634 i~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa----~a~~~G~~Vv~V~~ 709 (1049)
..++++.++++.|.+.. +..++|+.+...++.+. . +++++||++...|+.... .+...|++++.++.
T Consensus 67 ~~~le~~lA~l~g~~~~-i~~~sG~~Al~~~l~~l---l-----~~Gd~Viv~~~~y~~t~~~~~~~~~~~G~~v~~vd~ 137 (403)
T PRK07503 67 LALLEQRMASLEGGEAA-VALASGMGAITATLWTL---L-----RPGDEVIVDQTLYGCTFAFLHHGLGEFGVTVRHVDL 137 (403)
T ss_pred HHHHHHHHHHHhCCCcE-EEEcCHHHHHHHHHHHH---c-----CCCCEEEEccCccchHHHHHHHHHhhCCEEEEEeCC
Confidence 45788999999998764 55667776654443322 1 257889998877754322 24568999999987
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CccccccccHHHHHHHHHHcCCEEEEeccccccccCcCCCCccCCcEEE
Q 001586 710 DAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1049)
Q Consensus 710 d~~g~iD~~~L~~~i~~~~~~taaV~it~P-n~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~Pg~~GaDi~~ 788 (1049)
+ |+++|+++++ ++|++|++++| |.+|.+. |+++|+++||++|+++++|+++... ....|..+|+|+++
T Consensus 138 ~-----d~~~l~~~i~---~~tklV~le~p~NPtG~~~-di~~I~~la~~~gi~lIvD~a~a~~--~~~~~l~~g~Di~v 206 (403)
T PRK07503 138 T-----DPAALKAAIS---DKTRMVYFETPANPNMRLV-DIAAVAEIAHGAGAKVVVDNTYCTP--YLQRPLELGADLVV 206 (403)
T ss_pred C-----CHHHHHHhcC---ccCcEEEEeCCCCCCCeee-CHHHHHHHHHHcCCEEEEECCCccc--ccCCchhhCCCEEE
Confidence 3 7999999997 78999999999 4689887 8999999999999999999986432 23456668999999
Q ss_pred eCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhH
Q 001586 789 LNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGL 868 (1049)
Q Consensus 789 ~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl 868 (1049)
.|++|+|+.+ |+..+|+++.++++...+... +. + ..++ .+.+ .. .+ ++...|-+-+
T Consensus 207 ~S~tK~l~g~---gd~~gG~v~~~~~l~~~l~~~--~~--------~-~~~g-~~~s----~~---~a--~l~l~~L~tl 262 (403)
T PRK07503 207 HSATKYLGGH---GDITAGLVVGGKALADRIRLE--GL--------K-DMTG-AVMS----PF---DA--FLLMRGLKTL 262 (403)
T ss_pred ccccccccCC---CceeEEEEEcCHHHHHHHHhh--hH--------H-hCcC-CCCC----HH---HH--HHHHcCcchH
Confidence 9999998511 233478888777665543210 00 0 0111 1111 11 12 2333344555
Q ss_pred HHHHHHHHHHHHHHHHHHhcc
Q 001586 869 TEASKIAILNANYMAKRLEKH 889 (1049)
Q Consensus 869 ~~~~~~~~~~a~yL~~~L~~~ 889 (1049)
..+.++..+++..+.+.|+++
T Consensus 263 ~~r~~~~~~na~~~a~~L~~~ 283 (403)
T PRK07503 263 ALRMDRHCASAQAVAEWLARH 283 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHhC
Confidence 566677778999999999876
No 364
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.57 E-value=1.3e-13 Score=160.79 Aligned_cols=279 Identities=20% Similarity=0.234 Sum_probs=174.9
Q ss_pred HHHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHH-H---HhcCCEEEEEcC
Q 001586 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT-A---AMCGMKIVSVGT 709 (1049)
Q Consensus 634 i~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~-a---~~~G~~Vv~V~~ 709 (1049)
..++++.++++.|.+.. +..++|..+..++++++ . .++++||++...|+..... . ...|++++.++.
T Consensus 63 ~~~Le~~lA~~~g~~~~-i~~~sG~~Ai~~~l~al---l-----~~Gd~Vl~~~~~y~~t~~~~~~~~~~~gi~~~~~d~ 133 (388)
T PRK07811 63 RTALEEQLAALEGGAYG-RAFSSGMAATDCLLRAV---L-----RPGDHIVIPNDAYGGTFRLIDKVFTRWGVEYTPVDL 133 (388)
T ss_pred HHHHHHHHHHHhCCCce-EEeCCHHHHHHHHHHHH---h-----CCCCEEEEcCCCchHHHHHHHHhCcCCCeEEEEeCC
Confidence 45788999999998775 34456666665444433 1 2568899988766533222 2 235888888876
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-ccccccccHHHHHHHHHHcCCEEEEeccccccccCcCCCCccCCcEEE
Q 001586 710 DAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1049)
Q Consensus 710 d~~g~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~Pg~~GaDi~~ 788 (1049)
.|+++|+++++ ++|++|++++|+ .+|.+. |+++|+++||++|+++++|+++.. +....|...|+|+++
T Consensus 134 -----~d~e~l~~~i~---~~tklV~ie~p~NPtg~~~-dl~~I~~la~~~gi~lIvD~a~a~--~~~~~p~~~gaDivv 202 (388)
T PRK07811 134 -----SDLDAVRAAIT---PRTKLIWVETPTNPLLSIT-DIAALAELAHDAGAKVVVDNTFAS--PYLQQPLALGADVVV 202 (388)
T ss_pred -----CCHHHHHHhcC---cCCeEEEEECCCCCcceec-CHHHHHHHHHHcCCEEEEECCCCc--cccCCchhhCCcEEE
Confidence 58999999997 789999999995 589887 899999999999999999998642 223467678999999
Q ss_pred eCCCcccccCCCCCCCc---eeEEEEcc-cccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHc
Q 001586 789 LNLHKTFCIPHGGGGPG---MGPIGVKK-HLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMG 864 (1049)
Q Consensus 789 ~s~hK~f~~P~g~GGPg---~G~i~~~~-~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG 864 (1049)
+|++|+|+ ||+ +|++++++ .+...+.- . + ..++...+ +. . +++...+
T Consensus 203 ~S~sK~l~------g~~~~~gG~vv~~~~~l~~~~~~--~----------~-~~~g~~~s-~~-------~--a~l~~~~ 253 (388)
T PRK07811 203 HSTTKYIG------GHSDVVGGALVTNDEELDEAFAF--L----------Q-NGAGAVPG-PF-------D--AYLTLRG 253 (388)
T ss_pred ecCceeec------CCCCcEEEEEEECCHHHHHHHHH--H----------H-HhcCCCCC-HH-------H--HHHHHhc
Confidence 99999984 443 58887764 44333210 0 0 00111111 11 1 2333444
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhccCC---eeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHHHCCcccCCCCCCC
Q 001586 865 SKGLTEASKIAILNANYMAKRLEKHYP---ILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPV 941 (1049)
Q Consensus 865 ~eGl~~~~~~~~~~a~yL~~~L~~~~~---v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~p~ 941 (1049)
-+-+..+.++..+++..+++.|+++.. |.|++. + ..+..+++++.. .|+
T Consensus 254 L~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l------------~------~~~~~~~~~~~~-~g~--------- 305 (388)
T PRK07811 254 LKTLAVRMDRHSENAEAVAEFLAGHPEVSTVLYPGL------------P------SHPGHEVAARQM-RGF--------- 305 (388)
T ss_pred cCcHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCC------------C------CCchHHHHHHhc-CCC---------
Confidence 455666777788899999999987632 333321 0 123455666533 221
Q ss_pred CCEEEEEccCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCccccccch
Q 001586 942 PGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKVTCLFLHHGY 998 (1049)
Q Consensus 942 ~~~lri~~t~~~t~eeid~fv~aL~~i~~~i~~i~~g~~~~~~~~l~~~ph~~~~~~ 998 (1049)
++.+-|.+ ..+.++..+|++.|+-+. ...+ -++...|...|..+.++.
T Consensus 306 g~~~s~~~--~~~~~~~~~f~~~l~~~~-~~~s------~G~~~sl~~~~~~~~~~~ 353 (388)
T PRK07811 306 GGMVSVRL--AGGEEAARDFCARTKVFT-LAES------LGGVESLIEHPSAMTHAS 353 (388)
T ss_pred CceEEEEe--CCCHHHHHHHHHhCCcce-eecc------CCCCcceEeCCcccCccc
Confidence 23333333 235677888888886321 1112 224455565555555433
No 365
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.57 E-value=1.6e-12 Score=153.98 Aligned_cols=312 Identities=14% Similarity=0.116 Sum_probs=177.2
Q ss_pred hcHHHHHHHHHHHHHHhhCCC--ccccc-cCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCEE
Q 001586 628 QGYQEMFNNLGEWLCTITGFD--SFSLQ-PNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKI 704 (1049)
Q Consensus 628 ~G~~~~i~el~~~la~l~G~~--~~~l~-~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~V 704 (1049)
+|..++...+.+++..-.|.+ ...+. .+++++|.+ ++++.+. .++++|+++...+..+...+.+.|+++
T Consensus 94 ~G~~~lr~aia~~~~~~~~~~~~~~~v~it~G~~~al~---l~~~~l~-----~~Gd~Vlv~~P~y~~y~~~~~~~g~~~ 165 (430)
T PLN00145 94 VGLLPARRAIAEYLSRDLPYELSTDDIYLTAGCAQAIE---IIMSVLA-----QPGANILLPRPGYPLYEARAVFSGLEV 165 (430)
T ss_pred ccCHHHHHHHHHHHhhccCCCCChhhEEEeCCHHHHHH---HHHHHhc-----CCCCEEEEcCCCCccHHHHHHHcCCEE
Confidence 465555545555554433432 23344 444444443 3333331 256889999876666666688899999
Q ss_pred EEEcCCC--CCCCCHHHHHHHHHhcCCCeEEEEEEcCC-ccccccc--cHHHHHHHHHHcCCEEEEeccccc-cccC--c
Q 001586 705 VSVGTDA--KGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEE--GIDEICKIIHDNGGQVYMDGANMN-AQVG--L 776 (1049)
Q Consensus 705 v~V~~d~--~g~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~~--di~eI~~lah~~G~ll~vD~A~~~-a~~g--l 776 (1049)
+.+++.+ ++.+|+++|+++++ ++++++++++|| .+|.+.+ .+++|+++|+++|+++++|+++.. .+.+ +
T Consensus 166 ~~~~~~~~~~~~~d~~~l~~~~~---~~~~~i~i~~P~NPtG~v~~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~~~~ 242 (430)
T PLN00145 166 RHFDLLPERGWEVDLEGVEALAD---ENTVAMVIINPNNPCGSVYSYEHLAKIAETARKLGILVIADEVYDHLTFGSKPF 242 (430)
T ss_pred EEeeCCcccCCcCCHHHHHHHhC---cCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccchhhccCCCCc
Confidence 9998743 46899999999987 789999999995 5998762 488999999999999999998632 1111 1
Q ss_pred CCCCccC---CcEEEeCCCcccccCCCCCCCceeEEEEcc--cccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHH
Q 001586 777 TSPGYIG---ADVCHLNLHKTFCIPHGGGGPGMGPIGVKK--HLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSAL 851 (1049)
Q Consensus 777 ~~Pg~~G---aDi~~~s~hK~f~~P~g~GGPg~G~i~~~~--~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~ 851 (1049)
.+.+.++ .=+++.|+.|.|++| |.++|++++.. .+..... .... . ........+++...+.
T Consensus 243 ~~~~~~~~~~~vi~~~S~SK~~~~p----G~RlG~iv~~~~~~~~~~~~--~~~~-~------~~~~~~~~~~~~~~Q~- 308 (430)
T PLN00145 243 VPMGVFGEVAPVLTLGSISKRWVVP----GWRLGWIATCDPNGILKETK--VVDS-I------RNYLNISTDPATFVQG- 308 (430)
T ss_pred cchhhhcccCcEEEEeccccccCCC----CeeEEEEEEecchhhhhhhH--HHHH-H------HHHhcccCCCCHHHHH-
Confidence 1111121 125667788888765 78999998732 2221100 0000 0 0000011111111121
Q ss_pred HHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhccCCeee-ccCCCceeeEEEEeccCccccCCC-CHHHHHHHHH-
Q 001586 852 ILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILF-RGVNGTVAHEFIVDLRGLKNTAGI-EPEDVAKRLM- 928 (1049)
Q Consensus 852 ~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~~~v~~-~g~~g~~~~e~iv~~~~~~~~~g~-~~~~v~k~L~- 928 (1049)
++..+|..-..+-+++..+...++.+++.+.|+++..+.. ..+++.++ +.++++.-. -.+. +..+++.+|.
T Consensus 309 ---a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~P~ga~y--~~v~l~~~~-~~~~~~~~~~~~~ll~ 382 (430)
T PLN00145 309 ---AIPQIIANTKEEFFTKTLGLLKETADICYEKIKEIKCITCPHKPEGSMF--VMVKLDLSC-LSGIKDDMDFCCKLAK 382 (430)
T ss_pred ---HHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcCCCeeeE--EEeccChhh-cCCCCCHHHHHHHHHH
Confidence 1122222111233455556666778889999987522211 11233232 344443100 0012 3456776555
Q ss_pred HCCccc-CCCCCCCCCEEEEEccCCCCHHHHHHHHHHHHHHHHHH
Q 001586 929 DYGFHG-PTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEI 972 (1049)
Q Consensus 929 ~~Gi~~-~~~~~p~~~~lri~~t~~~t~eeid~fv~aL~~i~~~i 972 (1049)
++|+.+ +...|...+++||+++. +.++++..++.|++++...
T Consensus 383 ~~gV~v~pG~~fg~~~~lRis~~~--~~~~l~~al~rl~~~~~~~ 425 (430)
T PLN00145 383 EESVVVLPGSALGMKNWLRITFAI--DPPSLEDGLERLKSFCLRH 425 (430)
T ss_pred hCCEEEeCccccCCCCeEEEEeCC--CHHHHHHHHHHHHHHHHHh
Confidence 678875 33345456899999983 5677777777776665543
No 366
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.57 E-value=4.2e-13 Score=158.33 Aligned_cols=152 Identities=23% Similarity=0.253 Sum_probs=123.3
Q ss_pred HHHHHHHHHHhCCCCcceEeccchHHHHHHHHHHhhhccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCcc---h
Q 001586 214 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK---D 290 (1049)
Q Consensus 214 ~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a~~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~~~---~ 290 (1049)
.++++.+|++.|.+. +.++.+|+++.++++.++ .. +||+||++...|+.+...+...++..|++++++|.. +
T Consensus 66 ~~le~~lA~l~g~~~--al~~~SG~~Ai~~al~al-l~--pGd~VIv~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~ 140 (427)
T PRK05994 66 AVLEERVAALEGGTA--ALAVASGHAAQFLVFHTL-LQ--PGDEFIAARKLYGGSINQFGHAFKSFGWQVRWADADDPAS 140 (427)
T ss_pred HHHHHHHHHHhCCCc--EEEEcCHHHHHHHHHHHH-hC--CCCEEEEecCcchhHHHHHHHHHHhcCcEEEEECCCCHHH
Confidence 356789999999875 678899998888777665 23 889999999999998888776667789999999764 4
Q ss_pred hhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCCCC
Q 001586 291 IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGG 367 (1049)
Q Consensus 291 l~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~p~~~GaDivvgs~-k~lg~P~~~GG 367 (1049)
+++ ++++|++|++++| |++|.+.|+++|+++||++|++++|+ +.++.+....|.++|+|+++.|+ |.+++| ||
T Consensus 141 l~~ai~~~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD-~a~a~~~~~~pl~~gaDivv~S~tK~lgg~---~~ 216 (427)
T PRK05994 141 FERAITPRTKAIFIESIANPGGTVTDIAAIAEVAHRAGLPLIVD-NTLASPYLIRPIEHGADIVVHSLTKFLGGH---GN 216 (427)
T ss_pred HHHhcCcCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEE-CCccccccCCccccCCcEEEEcCccccCCC---CC
Confidence 555 7889999999998 79999999999999999999999994 45565666677889999999998 666543 45
Q ss_pred CceEEEE
Q 001586 368 PHAAFLA 374 (1049)
Q Consensus 368 P~~G~l~ 374 (1049)
+-+|++.
T Consensus 217 ~~gG~v~ 223 (427)
T PRK05994 217 SMGGIIV 223 (427)
T ss_pred cEEEEEE
Confidence 5566655
No 367
>PRK03321 putative aminotransferase; Provisional
Probab=99.57 E-value=2.3e-13 Score=156.76 Aligned_cols=280 Identities=14% Similarity=0.139 Sum_probs=177.2
Q ss_pred HHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCEEEEEcCCCCCC
Q 001586 635 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGN 714 (1049)
Q Consensus 635 ~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~Vv~V~~d~~g~ 714 (1049)
.++++.+++++|.+...+..++|+++. ...+++... .++++|+++......++..++..|++++.++.++++.
T Consensus 60 ~~lr~~ia~~~~~~~~~I~~~~G~~~~--l~~~~~~~~-----~~gd~Vli~~p~y~~~~~~~~~~g~~~~~v~~~~~~~ 132 (352)
T PRK03321 60 VELRAALAEHLGVPPEHVAVGCGSVAL--CQQLVQATA-----GPGDEVIFAWRSFEAYPILVQVAGATPVQVPLTPDHT 132 (352)
T ss_pred HHHHHHHHHHhCcCHHHEEECCCHHHH--HHHHHHHhc-----CCCCEEEeCCCCHHHHHHHHHHcCCEEEEccCCCCCC
Confidence 467788888999876555566676532 222233221 2578899886544444555778999999999986788
Q ss_pred CCHHHHHHHHHhcCCCeEEEEEEcCC-ccccccccHHHHHHHHHH--cCCEEEEeccccc-cccCcCCCC----ccCCc-
Q 001586 715 INIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHD--NGGQVYMDGANMN-AQVGLTSPG----YIGAD- 785 (1049)
Q Consensus 715 iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~~di~eI~~lah~--~G~ll~vD~A~~~-a~~gl~~Pg----~~GaD- 785 (1049)
+|+++++++++ +++++|++++|+ .+|.+- +.++|.++|+. +|+++++|+++.. ...+...+. +...+
T Consensus 133 ~~~~~l~~~~~---~~~~~v~l~~p~NPtG~~~-~~~~l~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~v 208 (352)
T PRK03321 133 HDLDAMAAAIT---DRTRLIFVCNPNNPTGTVV-TPAELARFLDAVPADVLVVLDEAYVEYVRDDDVPDGLELVRDHPNV 208 (352)
T ss_pred CCHHHHHHhhc---cCCCEEEEeCCCCCcCCCc-CHHHHHHHHHhCCCCeEEEEechHHHhccCcCCCcHHHHHhhCCCE
Confidence 99999999997 688899999994 699887 79999999987 5899999998631 111111111 11123
Q ss_pred EEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHch
Q 001586 786 VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGS 865 (1049)
Q Consensus 786 i~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~ 865 (1049)
+++.|+.|.|++| |-++|++++++++.+.+... .....++ .....++.+.+. ..
T Consensus 209 i~~~S~SK~~g~~----GlRiG~~v~~~~~~~~~~~~--------------~~~~~~s------~~~q~~a~~~l~--~~ 262 (352)
T PRK03321 209 VVLRTFSKAYGLA----GLRVGYAVGHPEVIAALRKV--------------AVPFSVN------SLAQAAAIASLA--AE 262 (352)
T ss_pred EEEecchHHhhhH----HHhhhhhcCCHHHHHHHHHh--------------cCCCCCC------HHHHHHHHHHhc--CH
Confidence 4455778887433 56689999887766543210 0001111 111112223332 22
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHHHCCcccCCCCCCCCCE
Q 001586 866 KGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGT 944 (1049)
Q Consensus 866 eGl~~~~~~~~~~a~yL~~~L~~~-~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~p~~~~ 944 (1049)
+.+.+..+...+..+++.+.|++. +.+ ..+.+.+ +.+++. .+..++.++|.++||.+.... .+.
T Consensus 263 ~~~~~~~~~~~~~r~~~~~~L~~~~~~~--~~~~g~~---i~i~l~-------~~~~~~~~~l~~~gI~v~~~~---~~~ 327 (352)
T PRK03321 263 DELLERVDAVVAERDRVRAALRAAGWTV--PPSQANF---VWLPLG-------ERTADFAAAAAEAGVVVRPFA---GEG 327 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCcc--CCCCCCE---EEEeCC-------CCHHHHHHHHHHCCEEEEccC---CCc
Confidence 233444444555566788888764 322 1222322 445542 246789999999999875432 356
Q ss_pred EEEEccCCCCHHHHHHHHHHHHHHH
Q 001586 945 LMIEPTESESKEELDRYCDALISIR 969 (1049)
Q Consensus 945 lri~~t~~~t~eeid~fv~aL~~i~ 969 (1049)
+||++ .+.+++++|+++|.+++
T Consensus 328 iRi~~---~~~~~~~~~~~al~~~~ 349 (352)
T PRK03321 328 VRVTI---GAPEENDAFLRAARAWR 349 (352)
T ss_pred EEEee---CCHHHHHHHHHHHHHHh
Confidence 99997 57899999999998874
No 368
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.57 E-value=1.6e-12 Score=152.11 Aligned_cols=288 Identities=24% Similarity=0.321 Sum_probs=180.7
Q ss_pred HHHHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEE-EcCCCCCccHHHHHhcCCEEEE---Ec
Q 001586 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGMKIVS---VG 708 (1049)
Q Consensus 633 ~i~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VL-ip~saHg~~pa~a~~~G~~Vv~---V~ 708 (1049)
...+++++++++.|.+.+ +..++|++|+++++++++.+....+. .+++|+ ...++||.........+..... .+
T Consensus 82 ~~~~la~~l~~~~~~~~v-~~~~gg~eA~~~al~~a~~~~~~~~~-~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~ 159 (396)
T PRK02627 82 PQEELAEKLVELSGMDKV-FFCNSGAEANEAAIKLARKYGHKKGI-EKPEIITAENSFHGRTLATLSATGQPKYQEGFEP 159 (396)
T ss_pred HHHHHHHHHHhhcCCCEE-EECCCcHHHHHHHHHHHHHHhcccCC-CCCeEEEECCCcCcccHHHHHhcCCccccccCCC
Confidence 355788899999888653 66789999998888887766432221 125566 4567788766654443322211 11
Q ss_pred CCCCC----CCCHHHHHHHHHhcCCCeEEEEEEcCC-cccccc---ccHHHHHHHHHHcCCEEEEeccccccccCcCCCC
Q 001586 709 TDAKG----NINIEELRKAAEANRDNLSTLMVTYPS-THGVYE---EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPG 780 (1049)
Q Consensus 709 ~d~~g----~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~---~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~Pg 780 (1049)
...+- ..|+++|++++. +++++|+++.++ ..|+.. ..+++|.++|+++|+++++|+++. ++...|
T Consensus 160 ~~~~~~~~~~~d~~~l~~~i~---~~~~~vii~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~----g~g~~g 232 (396)
T PRK02627 160 LVEGFIYVPFNDIEALKAAIT---DKTAAVMLEPIQGEGGVNPADKEYLQALRELCDENGILLILDEVQT----GMGRTG 232 (396)
T ss_pred CCCCceEeCCCCHHHHHHhcC---CCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhc----CCCccC
Confidence 11110 128999999996 789999998764 466432 258999999999999999999854 232221
Q ss_pred ------cc--CCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHH
Q 001586 781 ------YI--GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALI 852 (1049)
Q Consensus 781 ------~~--GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~ 852 (1049)
.. ..|++++ .|.++ +|-.+|++++++++.+.+... .. ....+ ++...
T Consensus 233 ~~~~~~~~~~~pdi~t~--sK~~~-----~G~rig~~~~~~~~~~~~~~~------------~~--~~t~~----~~~~~ 287 (396)
T PRK02627 233 KLFAYQHYGIEPDIMTL--AKGLG-----GGVPIGAVLAKEKVADVFTPG------------DH--GSTFG----GNPLA 287 (396)
T ss_pred ceeeehhcCCCCCEEEE--cchhh-----CCcccEEEEEcHHHHhccCCC------------CC--CCCCC----CCHHH
Confidence 12 3577655 48774 456789999888776554210 00 01111 23344
Q ss_pred HHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc---CCee--eccCCCceeeEEEEeccCccccCCCCHHHHHHHH
Q 001586 853 LPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRL 927 (1049)
Q Consensus 853 ~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~---~~v~--~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L 927 (1049)
+.++.+.|..+..+++. ++..++.+++.++|++. +... ..+ .| .+ +.+.+. .+..++.++|
T Consensus 288 ~~aa~~~l~~~~~~~~~---~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~g-~~--~~i~~~-------~~~~~~~~~l 353 (396)
T PRK02627 288 CAAALAVIEIIEEEGLL---ENAAEVGEYLRAKLRELLEKYPGIKEVRG-LG-LM--IGIELD-------RPAAEIVKKA 353 (396)
T ss_pred HHHHHHHHHHHhhccHH---HHHHHHHHHHHHHHHHHHHhCCCeeeecc-Cc-EE--EEEEec-------CcHHHHHHHH
Confidence 45556666655444443 44445667777777654 2211 111 12 11 334432 2567899999
Q ss_pred HHCCcccCCCCCCCCCEEEEEccCCCCHHHHHHHHHHHHHHHHH
Q 001586 928 MDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREE 971 (1049)
Q Consensus 928 ~~~Gi~~~~~~~p~~~~lri~~t~~~t~eeid~fv~aL~~i~~~ 971 (1049)
.++|+.+.... .+++|++|+...+++|+|++++.|++++++
T Consensus 354 ~~~Gv~v~~~~---~~~lRi~~~~~~~~~~i~~~~~~l~~~l~~ 394 (396)
T PRK02627 354 LEKGLLINVTG---DNVLRLLPPLIISKEEIDEAVDRLEEVLKE 394 (396)
T ss_pred HHCCeEEeecC---CCEEEEECCcccCHHHHHHHHHHHHHHHHh
Confidence 99999875332 378999999889999999999999987654
No 369
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.57 E-value=2e-13 Score=159.36 Aligned_cols=286 Identities=16% Similarity=0.073 Sum_probs=181.6
Q ss_pred HHHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHH----HHHhcCCEEEEEcC
Q 001586 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA----TAAMCGMKIVSVGT 709 (1049)
Q Consensus 634 i~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa----~a~~~G~~Vv~V~~ 709 (1049)
..++++.++++.|.+.+ +..++|..|...+++++. +++|+||++...|+.+.. .+...|++++.++.
T Consensus 67 ~~~Le~~lA~l~g~~~~-l~~~sgt~Ai~~~l~al~--------~~GD~Vl~~~~~y~~~~~~~~~~~~~~Gi~v~~vd~ 137 (394)
T PRK07050 67 SLALAQRLAEIEGGRHA-LLQPSGLAAISLVYFGLV--------KAGDDVLIPDNAYGPNRDHGEWLARDFGITVRFYDP 137 (394)
T ss_pred HHHHHHHHHHHhCCCeE-EEeccHHHHHHHHHHHHh--------CCCCEEEEecCCcccHHHHHHHHHHhcCeEEEEECC
Confidence 45788999999998754 556777777755554431 257899999887776443 35678999998875
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-ccccccccHHHHHHHHHHcCCEEEEeccccccccCcCCCCccCCcEEE
Q 001586 710 DAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1049)
Q Consensus 710 d~~g~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~Pg~~GaDi~~ 788 (1049)
. |.++++++++ ++|++|++++|+ .+|... |+++|+++||++|+++++|+++.. +.+..|.+.|+|+++
T Consensus 138 ~-----~~~~l~~~i~---~~tklV~le~p~Np~~~~~-di~~I~~ia~~~gi~livD~a~a~--~~~~~~l~~GaDi~v 206 (394)
T PRK07050 138 L-----IGAGIADLIQ---PNTRLIWLEAPGSVTMEVP-DVPAITAAARARGVVTAIDNTYSA--GLAFKPFEHGVDISV 206 (394)
T ss_pred C-----CHHHHHHhcC---CCCeEEEEECCCCCCccHh-hHHHHHHHHHHcCCEEEEECCccc--ccccCHHHcCCeEEE
Confidence 2 5578999887 789999999995 578777 899999999999999999998643 334678788999999
Q ss_pred eCCCcccccCCCCCCCceeEEEEc-ccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhh
Q 001586 789 LNLHKTFCIPHGGGGPGMGPIGVK-KHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (1049)
Q Consensus 789 ~s~hK~f~~P~g~GGPg~G~i~~~-~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eG 867 (1049)
.|++|+++ |+++.-+|.++++ +++.+.+.. .+ +.++...+ + .-+++...|-+.
T Consensus 207 ~S~tK~~~---g~~~~~gG~v~~~~~~~~~~~~~------------~~-~~~G~~~~-~---------~~a~l~lr~l~t 260 (394)
T PRK07050 207 QALTKYQS---GGSDVLMGATITADAELHAKLKL------------AR-MRLGIGVS-A---------DDCSLVLRGLPS 260 (394)
T ss_pred EECCceec---CCCCeeEEEEEECCHHHHHHHHH------------HH-HhcCCCCC-H---------HHHHHHHcCCCc
Confidence 99999985 1222225655554 445443210 00 01111111 1 123445556667
Q ss_pred HHHHHHHHHHHHHHHHHHHhcc---CCeeeccCCC------------ceeeEEEEeccCccccCCCCHHHHHHHHHHCCc
Q 001586 868 LTEASKIAILNANYMAKRLEKH---YPILFRGVNG------------TVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGF 932 (1049)
Q Consensus 868 l~~~~~~~~~~a~yL~~~L~~~---~~v~~~g~~g------------~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi 932 (1049)
+..+.++..++|..+++.|+++ ..+.|++-.. ...+.+.|.+..- ........+.++|...++
T Consensus 261 l~~Rl~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~~~g~~~s~~l~~~--~~~~~~~~~~~~l~~~~~ 338 (394)
T PRK07050 261 LQVRLAAHDRSALEVAEWLKARPEIATVLHPALPDCPGHAFWMRDFTGAGGLFSVVFDER--YSPAQVDAFVEALELFAI 338 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECCC--CCHHHHHHHHHcCCCCee
Confidence 7777888889999999999875 2333443111 1123344444210 001234566666665544
Q ss_pred cc--C---CCCCC-------------CCCEEEEEccCCCCHHHHHHHHHHHHHHHHH
Q 001586 933 HG--P---TMSWP-------------VPGTLMIEPTESESKEELDRYCDALISIREE 971 (1049)
Q Consensus 933 ~~--~---~~~~p-------------~~~~lri~~t~~~t~eeid~fv~aL~~i~~~ 971 (1049)
.+ + ++-.| .++.+|+|+.. |+.|.++++|.+.+..
T Consensus 339 ~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~iR~svGl----E~~~dl~~dl~~al~~ 391 (394)
T PRK07050 339 GWSWGGACSLAMPYDVASMRTAKWPHRGTLVRLYIGL----EDEADLIADLEQALEA 391 (394)
T ss_pred ccccCCccceEeeCcccccchhhcCCCCCEEEEEeCc----CCHHHHHHHHHHHHHH
Confidence 32 1 11011 12678999864 5667777777766553
No 370
>PLN02721 threonine aldolase
Probab=99.57 E-value=3.4e-13 Score=155.01 Aligned_cols=273 Identities=15% Similarity=0.125 Sum_probs=170.7
Q ss_pred HHHHHHHHHHHhCCCCcceEeccchHHHHHHHHHHhhhccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc----
Q 001586 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---- 288 (1049)
Q Consensus 213 l~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a~~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~~---- 288 (1049)
..++++.+|+++|.+. +.++.+||.+..+++.+.. ..+||+|++++..|.+..... ..++..|++++.++.
T Consensus 42 ~~~l~~~la~~~~~~~--~~~~~~Gs~a~~~~l~~~~--~~~gd~Vl~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~~ 116 (353)
T PLN02721 42 ALRLEEEMAKIFGKEA--ALFVPSGTMGNLISVLVHC--DVRGSEVILGDNSHIHLYENG-GISTLGGVHPRTVKNNEDG 116 (353)
T ss_pred HHHHHHHHHHHhCCce--eEEecCccHHHHHHHHHHc--cCCCCeEEEcCccceehhccc-chhhhcCceeEecCCCcCC
Confidence 3467789999999875 5667777766554444432 127899999999997655421 013456888887753
Q ss_pred ----chhhc-cC-------CCEeEEEEEcC--CCCeeecc---HHHHHHHHHhCCcEEEEEeccccccCC----CCCC--
Q 001586 289 ----KDIDY-KS-------GDVCGVLVQYP--GTEGEVLD---YGDFIKNAHANGVKVVMATDLLALTIL----KPPG-- 345 (1049)
Q Consensus 289 ----~~l~~-l~-------~~t~~V~v~~p--n~~G~i~d---i~~I~~~ah~~galliV~a~~~alg~l----~~p~-- 345 (1049)
+++++ ++ +++++|+++++ |++|.+.| +++|.++||++|++++++. ...++.. .++.
T Consensus 117 ~~d~~~l~~~i~~~~~~~~~~~~~v~l~~~~~np~G~~~~~~~l~~l~~l~~~~g~~livD~-a~~~~~~~~~~~~~~~~ 195 (353)
T PLN02721 117 TMDLDAIEAAIRPKGDDHFPTTRLICLENTHANCGGRCLSVEYTDKVGELAKRHGLKLHIDG-ARIFNASVALGVPVHRL 195 (353)
T ss_pred CcCHHHHHHHHHhccCCCCCcceEEEEeccccccCCccccHHHHHHHHHHHHHcCCEEEEEc-hhhhcchhhhCCCHHHH
Confidence 34444 55 58899998764 46788765 7899999999999999943 1122210 1222
Q ss_pred cccceEEEecC-ccccccCCCCCCceEEEEEchhHHhcCCCceeeeeecCCCCcceeeecccccccccccccCCCccchh
Q 001586 346 ELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQ 424 (1049)
Q Consensus 346 ~~GaDivvgs~-k~lg~P~~~GGP~~G~l~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irrekaTsni~t~~ 424 (1049)
..++|+++.+. |+|++ |.+++++.++++.+.+... ... + .++.+. .
T Consensus 196 ~~~~d~~~~s~sK~l~~------~~G~~~~~~~~~~~~~~~~-----~~~-----~--------------~~~~~~---~ 242 (353)
T PLN02721 196 VKAADSVSVCLSKGLGA------PVGSVIVGSKSFIRKAKRL-----RKT-----L--------------GGGMRQ---V 242 (353)
T ss_pred hhhCCEEEEecccccCC------ceeeEEecCHHHHHhHHHH-----HHh-----c--------------CCCeeh---h
Confidence 34899988886 77653 4334566677765543100 000 0 000000 0
Q ss_pred HHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHhhcCCCeEE-cCCCCcceEEEecC----C-HHHHHHHHHHcCCe
Q 001586 425 ALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEV-QGLPFFDTVKVKCA----D-AHAIASAAYKIEMN 498 (1049)
Q Consensus 425 ~l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~g~~~v-~~~~~~~~v~i~~~----~-~~~v~~~L~~~gI~ 498 (1049)
+..+ .+++. .+ .+-++++ ++..++++++.+.|++++++++ +..+..+-+.+.++ . ..++.++|.++||.
T Consensus 243 ~~~~-~~~~~-~l--~~~~~~~-~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gi~ 317 (353)
T PLN02721 243 GVLA-AAALV-AL--QENVPKL-EDDHKKAKLLAEGLNQIKGLRVNVAAVETNIVYFDITDGSRITAEKLCKSLEEHGVL 317 (353)
T ss_pred HHHH-HHHHH-HH--HHHHHHH-HHHHHHHHHHHHHHHhCCCcEEecCCccceEEEEEccCCccccHHHHHHHHHhCCcE
Confidence 1111 11110 11 1112222 3335678899999998844755 43322223444443 2 67899999999999
Q ss_pred eeeecCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001586 499 LRVVDSNTVTASFDETTTLEDVDKLFIVFAG 529 (1049)
Q Consensus 499 ~~~~~~~~vris~~~~~t~edid~lv~aL~~ 529 (1049)
++....+.+|++++.+++++|+++++++|+.
T Consensus 318 v~~~~~~~lR~~~~~~~~~~~i~~~~~~l~~ 348 (353)
T PLN02721 318 LMPGNSSRIRVVTHHQISDSDVQYTLSCFQQ 348 (353)
T ss_pred EecCCCceEEEEecCcCCHHHHHHHHHHHHH
Confidence 9877778999999999999999999999963
No 371
>PRK06149 hypothetical protein; Provisional
Probab=99.57 E-value=6.5e-13 Score=171.06 Aligned_cols=298 Identities=20% Similarity=0.289 Sum_probs=188.3
Q ss_pred HHHHHHHHHHHhh--CCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEE-EcCCCCCccHHHHHhcC--------
Q 001586 633 MFNNLGEWLCTIT--GFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCG-------- 701 (1049)
Q Consensus 633 ~i~el~~~la~l~--G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VL-ip~saHg~~pa~a~~~G-------- 701 (1049)
...++.++|++++ +++. .++.+||+++++++++.+|+|. +|++|| +..++||..-.+....+
T Consensus 625 ~~~elae~L~~~~p~~~~~-v~f~~SGsEA~e~AlklAr~~t------gr~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~ 697 (972)
T PRK06149 625 AVAEFSERLAALAPDGLDT-VFLVNSGSEANDLAIRLAWAAS------GRRDVVSVLEAYHGWTVATDAVSTSIADNPQA 697 (972)
T ss_pred HHHHHHHHHHHhCCCCcCE-EEEeCCchHHHHHHHHHHHHhc------CCCeEEEEeCCCCCcChhHhhhcCCccccccc
Confidence 3458889999998 4444 4778999999999999888862 234455 67889987644321111
Q ss_pred ----C-EEEEEcCCCC--C---CCC-----HHHHHHHHH---hcCCCeEEEEEEcC-Cccccccc---cHHHHHHHHHHc
Q 001586 702 ----M-KIVSVGTDAK--G---NIN-----IEELRKAAE---ANRDNLSTLMVTYP-STHGVYEE---GIDEICKIIHDN 759 (1049)
Q Consensus 702 ----~-~Vv~V~~d~~--g---~iD-----~~~L~~~i~---~~~~~taaV~it~P-n~~G~i~~---di~eI~~lah~~ 759 (1049)
. .+..++.... + ..| .+++++.++ ++.+++++|+++.. +..|.+.+ .+++|.++|++|
T Consensus 698 ~~~~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~ 777 (972)
T PRK06149 698 LETRPDWVHPVESPNTYRGRFRGADSAADYVRDVVAQLEELDASGRGLAGFICEPVYGNAGGIALPPGYLQQVYAAVRAR 777 (972)
T ss_pred cCCCCCCeEEeCCCcccCCcCCCcccHHHHHHHHHHHHHHHhhcCCceEEEEEcccccCCCcccCCHHHHHHHHHHHHHc
Confidence 0 1233432211 1 112 355555553 23467888888754 44677652 399999999999
Q ss_pred CCEEEEeccccccccCcCCCCcc---------CCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCC
Q 001586 760 GGQVYMDGANMNAQVGLTSPGYI---------GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGI 830 (1049)
Q Consensus 760 G~ll~vD~A~~~a~~gl~~Pg~~---------GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~ 830 (1049)
|+++++|++ +.|+.+.|++ -+||+++ .|.+ |+|-| +|.++++++++..+... +
T Consensus 778 g~llI~DEV----~tGfGRtG~~~~a~e~~gv~PDivt~--gK~l----g~G~P-l~av~~~~~i~~~~~~~--~----- 839 (972)
T PRK06149 778 GGVCIADEV----QVGYGRLGHYFWGFEQQGVVPDIITM--AKGM----GNGHP-LGAVITRREIAEALEAE--G----- 839 (972)
T ss_pred CCEEEEEee----hhcCCccCccchhhhhcCCCCCEEEe--cccc----cCCee-eEEEEEcHHHHhhhccC--C-----
Confidence 999999987 4556666641 3699876 4765 44434 57778888777654311 0
Q ss_pred CCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc---CCee--eccCCCce-eeE
Q 001586 831 PAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPIL--FRGVNGTV-AHE 904 (1049)
Q Consensus 831 ~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~---~~v~--~~g~~g~~-~~e 904 (1049)
...++..|+++.++++.+.|..+.++++.+ ++....+||+++|+++ +.++ +.|. |.. ..+
T Consensus 840 ----------~~~sT~~gnP~~~aaala~L~~i~~e~l~~---~~~~~G~~l~~~L~~l~~~~~~i~~vrG~-Gl~~gve 905 (972)
T PRK06149 840 ----------YFFSSTGGSPVSCRIGMAVLDVLREEKLQE---NARRVGDHLKARLEALADRHPLIGAVHGM-GLYLGVE 905 (972)
T ss_pred ----------cccCCCCCCHHHHHHHHHHHHHHHhcCHHH---HHHHHHHHHHHHHHHHHHhCCCeEEEeec-ceEEEEE
Confidence 000112457778888889999887776654 3446678899999864 3332 2232 322 122
Q ss_pred EEEeccCccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEccCCCCHHHHHHHHHHHHHHHHH
Q 001586 905 FIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREE 971 (1049)
Q Consensus 905 ~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~eeid~fv~aL~~i~~~ 971 (1049)
|+-+..+ +.........+.++|.++|+.+.... +..+.|++.|....|++|+|.++++|.+++.+
T Consensus 906 l~~~~~~-~~~~~~~~~~i~~~l~~~Gvl~~~~g-~~~~vl~~~Ppl~it~~~id~~~~~l~~~l~~ 970 (972)
T PRK06149 906 LVRDRQT-LEPATEETAAICDRLLELGVIMQPTG-DHLNILKIKPPLCLDRESADFFVDMLDRVLTE 970 (972)
T ss_pred EecCccc-CCCChHHHHHHHHHHHhCCeEEeecC-CCCCEEEEECCCcCCHHHHHHHHHHHHHHHHh
Confidence 2211110 00000124578899999999875332 12478999999999999999999999988754
No 372
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=99.57 E-value=5.7e-13 Score=153.81 Aligned_cols=282 Identities=14% Similarity=0.125 Sum_probs=177.6
Q ss_pred HHHHHHHHHhhCCCcc-ccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCEEEEEcCCCCC
Q 001586 635 NNLGEWLCTITGFDSF-SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKG 713 (1049)
Q Consensus 635 ~el~~~la~l~G~~~~-~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~Vv~V~~d~~g 713 (1049)
.++++.+++.+|.+.. .+..++|++.. ..++++.+. .++++|+++...+..+...++..|++++.++.++++
T Consensus 66 ~~lr~~ia~~~~~~~~~~I~~t~G~~~~--i~~~~~~~~-----~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~ 138 (356)
T PRK04870 66 AALKAALRAAMGVPAGADVLLGNGSDEL--IQLLALACA-----KPGATVLAPEPGFVMYRMSAKLAGLEFVGVPLTADF 138 (356)
T ss_pred HHHHHHHHHHhCcCCCCcEEEcCCHHHH--HHHHHHHhc-----CCCCEEEECCCCHHHHHHHHHHcCCEEEEecCCCCC
Confidence 4677888999987642 45555565422 222233221 256889998876555555578899999999998778
Q ss_pred CCCHHHHHHHHHhcCCCeEEEEEEcCC-ccccccccHHHHHHHHHHcCCEEEEeccccccccC--cC-CCCccCCcEEEe
Q 001586 714 NINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVG--LT-SPGYIGADVCHL 789 (1049)
Q Consensus 714 ~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~g--l~-~Pg~~GaDi~~~ 789 (1049)
.+|+++|++++.+ .++++|++++|+ .+|.+- +.+++.++++..++++++|+++.. +.. +. ......--+++.
T Consensus 139 ~~d~~~l~~~~~~--~~~~~v~l~~p~NPtG~~~-~~~~~~~i~~~~~~~ii~De~y~~-~~~~~~~~~~~~~~~vi~~~ 214 (356)
T PRK04870 139 TLDLPAMLAAIAE--HRPALVFLAYPNNPTGNLF-DDADVERIIEAAPGLVVVDEAYQP-FAGDSWLPRLARFPNLLVMR 214 (356)
T ss_pred CCCHHHHHHHhhc--CCCCEEEEcCCCCCCCCCC-CHHHHHHHHHHCCCEEEEECCchh-hcCcchHHHHhhCCCEEEEe
Confidence 9999999999962 478899999995 599887 677777777766899999998631 211 00 011122235667
Q ss_pred CCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHH
Q 001586 790 NLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLT 869 (1049)
Q Consensus 790 s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~ 869 (1049)
|++| |++ .|.++|++++++++...+... + ...+++ ..++ .++...+.. .+-++
T Consensus 215 S~SK-~~~----~GlRiG~~i~~~~~i~~~~~~------------~--~~~~~~--~~~q----~~a~~~l~~--~~~~~ 267 (356)
T PRK04870 215 TVSK-LGL----AGLRLGYLAGHPAWIAELDKV------------R--PPYNVN--VLTQ----ATALFALEH--VDVLD 267 (356)
T ss_pred cchh-hhh----HHHhhhhhhCCHHHHHHHHHc------------c--CCCcCC--HHHH----HHHHHHHhC--HHHHH
Confidence 7777 543 367799999887665543210 0 001111 1111 112222221 22355
Q ss_pred HHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHHHCCcccCCC-CC-C-CCCEEE
Q 001586 870 EASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTM-SW-P-VPGTLM 946 (1049)
Q Consensus 870 ~~~~~~~~~a~yL~~~L~~~~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~-~~-p-~~~~lr 946 (1049)
+..++..++.+++.+.|++...+.+..+.+ . -+.++++ +..++.+.|.++||.+... .| + ..+++|
T Consensus 268 ~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~--~~~~~~~--------~~~~~~~~l~~~gI~v~~~~~f~~~~~~~iR 336 (356)
T PRK04870 268 AQAAQLRAERTRLAAALAALPGVTVFPSAA-N--FILVRVP--------DAAAVFDGLKTRGVLVKNLSGMHPLLANCLR 336 (356)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCcEECCCCC-e--EEEEECC--------CHHHHHHHHHHCCEEEEECCCCCCCCCCeEE
Confidence 555666677888888887642322212212 1 1445542 3567889999999987432 23 2 357999
Q ss_pred EEccCCCCHHHHHHHHHHHHHH
Q 001586 947 IEPTESESKEELDRYCDALISI 968 (1049)
Q Consensus 947 i~~t~~~t~eeid~fv~aL~~i 968 (1049)
|++. +.+++++|+++|+++
T Consensus 337 is~~---~~~~~~~l~~al~~~ 355 (356)
T PRK04870 337 VTVG---TPEENAQFLAALKAA 355 (356)
T ss_pred EeCC---CHHHHHHHHHHHHHh
Confidence 9986 689999999999875
No 373
>PLN02509 cystathionine beta-lyase
Probab=99.57 E-value=1.9e-13 Score=161.62 Aligned_cols=216 Identities=19% Similarity=0.235 Sum_probs=148.3
Q ss_pred HHHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHH----HHhcCCEEEEEcC
Q 001586 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGT 709 (1049)
Q Consensus 634 i~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~----a~~~G~~Vv~V~~ 709 (1049)
..+++++++++.|.+.+ +..++|..+. +++..+ . +++|+||++...|+.+... ....|++++.++.
T Consensus 135 ~~aLE~~lA~leg~e~a-i~~~SG~aAi-~~il~l---l-----~~GD~VI~~~~~y~~t~~ll~~~l~~~G~~v~~vd~ 204 (464)
T PLN02509 135 RDALESLLAKLDKADRA-FCFTSGMAAL-SAVTHL---I-----KNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNT 204 (464)
T ss_pred HHHHHHHHHHHhCCCEE-EEeCcHHHHH-HHHHHH---h-----CCCCEEEEcCCchhhHHHHHHHHHHHCCeEEEEeCC
Confidence 56788999999987664 5556776554 222221 1 2578999988877665432 3467999998875
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CccccccccHHHHHHHHHHcCCEEEEeccccccccCcCCCCccCCcEEE
Q 001586 710 DAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1049)
Q Consensus 710 d~~g~iD~~~L~~~i~~~~~~taaV~it~P-n~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~Pg~~GaDi~~ 788 (1049)
.|+++++++++ ++|++|++++| |.+|.+. |+++|+++||++|++++||+++..+. +..|..+|+|+++
T Consensus 205 -----~d~e~l~~ai~---~~TklV~lesPsNPtG~i~-Dl~~I~~lAk~~g~~lIVD~A~a~~~--~~~pl~~gaDivv 273 (464)
T PLN02509 205 -----TNLDEVAAAIG---PQTKLVWLESPTNPRQQIS-DIRKIAEMAHAQGALVLVDNSIMSPV--LSRPLELGADIVM 273 (464)
T ss_pred -----CCHHHHHHhCC---cCCeEEEEECCCCCCCCHH-HHHHHHHHHHHcCCEEEEECCccccc--cCChhhcCCcEEE
Confidence 47899999996 78999999999 4689887 89999999999999999999864332 3567778999999
Q ss_pred eCCCcccccCCCCCCCceeEEEEccc-ccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhh
Q 001586 789 LNLHKTFCIPHGGGGPGMGPIGVKKH-LAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (1049)
Q Consensus 789 ~s~hK~f~~P~g~GGPg~G~i~~~~~-l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eG 867 (1049)
+|++|+++- .|+...|++++++. +...+. .. + ...+..- +++ -+++...|-+-
T Consensus 274 ~S~tK~l~G---~gdv~gG~v~~~~~~l~~~~~--~~----------~-~~~g~~l-~p~---------~A~l~lr~L~t 327 (464)
T PLN02509 274 HSATKFIAG---HSDVMAGVLAVKGEKLAKEVY--FL----------Q-NSEGSGL-APF---------DCWLCLRGIKT 327 (464)
T ss_pred ecCcccccC---CCccceeEEEeccHHHHHHHH--HH----------H-HhcCCCc-CHH---------HHHHHHhhhhh
Confidence 999999852 13334788887653 222110 00 0 0001100 111 12334445556
Q ss_pred HHHHHHHHHHHHHHHHHHHhccC---Ceeecc
Q 001586 868 LTEASKIAILNANYMAKRLEKHY---PILFRG 896 (1049)
Q Consensus 868 l~~~~~~~~~~a~yL~~~L~~~~---~v~~~g 896 (1049)
+..+.++..++|.++++.|+++. +|.|+|
T Consensus 328 L~~R~~r~~~nA~~la~~L~~~p~V~~V~yPg 359 (464)
T PLN02509 328 MALRIEKQQENARKIAMYLSSHPRVKKVYYAG 359 (464)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCccEEECCC
Confidence 67778888899999999999862 345554
No 374
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.57 E-value=3.9e-13 Score=158.44 Aligned_cols=293 Identities=21% Similarity=0.245 Sum_probs=174.6
Q ss_pred HHHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCC----c--cHHHHHhcCCEEEEE
Q 001586 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHG----T--NPATAAMCGMKIVSV 707 (1049)
Q Consensus 634 i~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg----~--~pa~a~~~G~~Vv~V 707 (1049)
..++++.+++++|.+.+ +..++|+.|...++.+ + .++++||+++..|. + .|..+...|++++++
T Consensus 124 ~~~le~~lA~l~gae~a-lvv~sg~aAi~l~l~~---l------~~GdeVIvs~~e~v~~ggs~~i~~~~~~~G~~~~~v 193 (454)
T TIGR00474 124 YSHVEGLLCELTGAEDA-LVVNNNAAAVLLALNT---L------AKGKEVIVSRGELVEIGGSFRIPDVMEQSGAKLVEV 193 (454)
T ss_pred HHHHHHHHHHHhCCCcE-EEECCHHHHHHHHHHH---h------CCcCEEEECCChhhhhcchhhHHHHHHHcCCEEEEe
Confidence 56889999999999875 4467777766433322 1 25678999886552 1 234466789999999
Q ss_pred cCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCCc---ccc--ccccHHHHHHHHHHcCCEEEEeccccc--c---ccC--
Q 001586 708 GTDAKGNINIEELRKAAEANRDNLSTLMVTYPST---HGV--YEEGIDEICKIIHDNGGQVYMDGANMN--A---QVG-- 775 (1049)
Q Consensus 708 ~~d~~g~iD~~~L~~~i~~~~~~taaV~it~Pn~---~G~--i~~di~eI~~lah~~G~ll~vD~A~~~--a---~~g-- 775 (1049)
+.+ +..|+++++++|+ ++|++|++++++. .|. +. |+++|+++||++|++++||.+... . ++.
T Consensus 194 ~~~--~~~~l~dle~aI~---~~T~lv~~~h~sN~~~~G~~~~~-dl~~I~~la~~~g~~vivD~~sG~l~~~~~~gl~~ 267 (454)
T TIGR00474 194 GTT--NRTHLKDYEDAIT---ENTALLLKVHTSNYRIVGFTEEV-SIAELVALGREHGLPVMEDLGSGSLVDLSRYGLPD 267 (454)
T ss_pred CCC--CCCCHHHHHHhcC---cCCEEEEEEccCcccccCCCCCC-CHHHHHHHHHHcCCeEEEECCCcccccchhccCCC
Confidence 763 4578999999997 8899999988853 353 44 799999999999999999965210 0 000
Q ss_pred ---cCCCCccCCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCC-CCCccchhhHH
Q 001586 776 ---LTSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLG-TIAAAPWGSAL 851 (1049)
Q Consensus 776 ---l~~Pg~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~-~i~sa~~g~~~ 851 (1049)
+..|.++|+|++++|+||+| |||..|++++++++.+.+..+...... .-.|.+- .... -.|..+
T Consensus 268 ~p~~~~~~~~GaDiv~fSg~K~L------gGp~~G~i~g~~~~i~~l~~~~l~r~l-----r~~k~~la~l~~-~l~~~~ 335 (454)
T TIGR00474 268 EPTVQEVIAAGVDLVTFSGDKLL------GGPQAGIIVGKKELIERLKKNPLTRAL-----RVDKLTLAALEA-TLRLYL 335 (454)
T ss_pred CcccccHhHcCCCEEEecCcccc------CCCeEEEEEECHHHHHhhhhchhHHHH-----hhChHHHHHHHH-HHHHHh
Confidence 12345689999999999998 578889999998777665543221100 0000000 0000 000000
Q ss_pred HHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc----C--Ceeec----c--C-CCceeeEEEEeccCccccCCC
Q 001586 852 ILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH----Y--PILFR----G--V-NGTVAHEFIVDLRGLKNTAGI 918 (1049)
Q Consensus 852 ~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~----~--~v~~~----g--~-~g~~~~e~iv~~~~~~~~~g~ 918 (1049)
..-.+++..-|-+-+....++..++|..+++.|++. + ++... | . .+.....+.+.+.+ .+.
T Consensus 336 --~~~~a~~~~~~l~~l~~~~~~~~~~A~~la~~L~~~~~~~~~~~~~~~~~~~ggg~~p~~~l~~~~v~~~~----~~~ 409 (454)
T TIGR00474 336 --DPEKALEKIPTLRMLTQSPEELRARAERLAKRLKAALGPGFELEIVPGLSQVGGGSLPDERLPSYAVTLTP----DGL 409 (454)
T ss_pred --CchhhhhhchHHHHhccCHHHHHHHHHHHHHHHHhhccCCceEEEEEcCCcccCCCCcCCCCCeEEEEEec----CCC
Confidence 000011222222223333455666788888888653 1 22211 0 0 01122334444431 246
Q ss_pred CHHHHHHHHHHCC--cccCCCCCCCCCEEEEEccCCCCHHHHHHHHHHH
Q 001586 919 EPEDVAKRLMDYG--FHGPTMSWPVPGTLMIEPTESESKEELDRYCDAL 965 (1049)
Q Consensus 919 ~~~~v~k~L~~~G--i~~~~~~~p~~~~lri~~t~~~t~eeid~fv~aL 965 (1049)
++.++.++|++.. |.++ .. .+.+.+-+-- ..++|++.+++.|
T Consensus 410 ~~~~l~~~lr~~~~~ii~r-~~---~~~~~ld~r~-~~~~~~~~~~~~~ 453 (454)
T TIGR00474 410 SAEKLEARLRELPPPIIGR-IE---DDRFLLDLRT-LLEDEEELLIEAL 453 (454)
T ss_pred CHHHHHHHHhcCCCCEEEE-EE---CCEEEEEeCc-CCHHHHHHHHHHh
Confidence 7889999998644 3332 11 3666666543 3567888887765
No 375
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.57 E-value=8.5e-13 Score=153.52 Aligned_cols=290 Identities=21% Similarity=0.235 Sum_probs=177.4
Q ss_pred HHHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEc-CCCCCccHHHHHhcCCEE---EEEcC
Q 001586 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIP-VSAHGTNPATAAMCGMKI---VSVGT 709 (1049)
Q Consensus 634 i~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip-~saHg~~pa~a~~~G~~V---v~V~~ 709 (1049)
..++++.+++++|.+. .+..++|+++.+.++++++.+...+| .++++|+++ .+.|+.........+-.+ ...+.
T Consensus 71 ~~~l~~~la~~~g~~~-~~~~~sg~~a~~~a~~~~~~~~~~~~-~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~ 148 (379)
T TIGR00707 71 QEELAEKLVEHSGADR-VFFCNSGAEANEAALKLARKYTGDKG-KEKKKIIAFENSFHGRTMGALSATGQPKYQKGFEPL 148 (379)
T ss_pred HHHHHHHHHhhCCCCE-EEEeCCcHHHHHHHHHHHHHHhhccC-CCCCeEEEECCCcCCccHHHHHhcCChhhhccCCCC
Confidence 5588999999999874 46778888888877777765533222 135677764 456655444322111111 11122
Q ss_pred CCCCC----CCHHHHHHHHHhcCCCeEEEEEEcCC-cccccc---ccHHHHHHHHHHcCCEEEEeccccccccCcCC--C
Q 001586 710 DAKGN----INIEELRKAAEANRDNLSTLMVTYPS-THGVYE---EGIDEICKIIHDNGGQVYMDGANMNAQVGLTS--P 779 (1049)
Q Consensus 710 d~~g~----iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~---~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~--P 779 (1049)
..+.. .|+++|+++++ +++++|+++.++ +.|++. +++++|.++|+++|+++++|+++. .++.-.. +
T Consensus 149 ~~~~~~~~~~d~~~l~~~~~---~~~~~v~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~-~~~~~g~~~~ 224 (379)
T TIGR00707 149 VPGFSYAPYNDIESLKKAID---DETAAVIVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQT-GIGRTGKFFA 224 (379)
T ss_pred CCCceeeCCCCHHHHHHHhh---hCeeEEEEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCccchhhh
Confidence 11211 28999999997 688999987654 456542 258999999999999999999864 1211001 1
Q ss_pred -C--ccCCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHH
Q 001586 780 -G--YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPIS 856 (1049)
Q Consensus 780 -g--~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a 856 (1049)
. ....|++++ +|+|+ +|.++|+++.++++...+..... . ...+ ++...+.++
T Consensus 225 ~~~~~~~~d~~t~--sK~~~-----~G~riG~~~~~~~~~~~~~~~~~------------~--~~~~----~~~~~~~aa 279 (379)
T TIGR00707 225 YEHYGIEPDIITL--AKGLG-----GGVPIGATLAKEEVAEAFTPGDH------------G--STFG----GNPLACAAA 279 (379)
T ss_pred HHhcCCCCCEEEE--ccccc-----CCcccEEEEEcHHHHhhhcCCCC------------C--CCCC----CCHHHHHHH
Confidence 1 123577654 68874 46778999988776665421000 0 0111 123444455
Q ss_pred HHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHHHCCcccC
Q 001586 857 YTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGP 935 (1049)
Q Consensus 857 ~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~-~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~ 935 (1049)
++.|..+...+ ..++..++.++++++|+++ .........+ ...-+.+.++ .+..++.++|.++||.+.
T Consensus 280 ~aaL~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~g~~~~~~~~-------~~~~~~~~~l~~~Gv~v~ 348 (379)
T TIGR00707 280 LAVLEVIEKER---LLENVKEKGDYFKERLEELGKNYPNKEVRG-KGLMLGIELE-------APCKDIVKKALEKGLLVN 348 (379)
T ss_pred HHHHHHHHhhh---HHHHHHHHHHHHHHHHHHHHhhCCCCcccc-CceEEEEEec-------CcHHHHHHHHHHCCcEEe
Confidence 66666554333 3345556778888888764 2221110001 1112344443 135789999999999875
Q ss_pred CCCCCCCCEEEEEccCCCCHHHHHHHHHHHHHH
Q 001586 936 TMSWPVPGTLMIEPTESESKEELDRYCDALISI 968 (1049)
Q Consensus 936 ~~~~p~~~~lri~~t~~~t~eeid~fv~aL~~i 968 (1049)
... .+.+|++++...+.++++++++.|+++
T Consensus 349 ~~~---~~~lRi~~~~~~t~~~i~~~~~~l~~~ 378 (379)
T TIGR00707 349 CAG---PKVLRFLPPLIITKEEIDEAVSALEEA 378 (379)
T ss_pred eCC---CCEEEEECCCcCCHHHHHHHHHHHHHh
Confidence 322 378999999889999999999999865
No 376
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=99.56 E-value=7.5e-13 Score=154.51 Aligned_cols=294 Identities=15% Similarity=0.165 Sum_probs=177.3
Q ss_pred hcHHHHHHHHHHHHHHhhCCC--cc-ccccCchH-HHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCE
Q 001586 628 QGYQEMFNNLGEWLCTITGFD--SF-SLQPNAGA-AGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMK 703 (1049)
Q Consensus 628 ~G~~~~i~el~~~la~l~G~~--~~-~l~~~sGa-~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~ 703 (1049)
+|..++...+.+++.+.+|.+ .. .+..++|+ +|. .++++.+. .++++|+++...+..+..+++..|.+
T Consensus 69 ~G~~~lr~aia~~~~~~~g~~~~~~~~ii~t~G~~~~i---~~~~~~~~-----~~gd~Vl~~~P~y~~~~~~~~~~g~~ 140 (385)
T PRK09276 69 EGMLEFRKAVADWYKRRFGVELDPETEVISLIGSKEGI---AHIPLAFV-----NPGDVVLVPDPGYPVYKIGTIFAGGE 140 (385)
T ss_pred CCcHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHHH---HHHHHHhC-----CCCCEEEEcCCCCcChHHHHHHcCCE
Confidence 465566666667776666653 22 35554554 343 23333332 25688999988776666678889999
Q ss_pred EEEEcCCCC--CCCCHHHHHHHHHhcCCCeEEEEEEcCC-ccccccc--cHHHHHHHHHHcCCEEEEeccccccc-cCcC
Q 001586 704 IVSVGTDAK--GNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEE--GIDEICKIIHDNGGQVYMDGANMNAQ-VGLT 777 (1049)
Q Consensus 704 Vv~V~~d~~--g~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~~--di~eI~~lah~~G~ll~vD~A~~~a~-~gl~ 777 (1049)
++.++.+.+ ..+|++++++++. +++++|++++|+ .+|.+-+ .+++|+++|+++|+++++|.++..-. .+..
T Consensus 141 ~~~v~~~~~~g~~~d~~~l~~~~~---~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~ 217 (385)
T PRK09276 141 PYFMPLKEENGFLPDLDAIPEDVA---KKAKLMFINYPNNPTGAVADLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGYK 217 (385)
T ss_pred EEEEecCCCCCCcCCHHHHHHhcc---ccceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEecchhheecCCCC
Confidence 999998643 4589999998886 688999999995 6898752 37899999999999999999864211 1111
Q ss_pred CC------CccCCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHH
Q 001586 778 SP------GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSAL 851 (1049)
Q Consensus 778 ~P------g~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~ 851 (1049)
.+ ...+..+++.++.|.|+.| |-++|++++++++...+... +......++ ..
T Consensus 218 ~~~~~~~~~~~~~~i~~~S~SK~~g~~----GlRiG~~i~~~~l~~~~~~~------------~~~~~~~~~------~~ 275 (385)
T PRK09276 218 PPSFLEVPGAKDVGIEFHSLSKTYNMT----GWRIGFAVGNADLIAGLGKV------------KSNVDSGVF------QA 275 (385)
T ss_pred CCChhccCCCcCCEEEEecchhhcCCc----chhheeeeCCHHHHHHHHHH------------HhhccCCCC------HH
Confidence 11 1112346778888988543 56699999887665543210 000001111 11
Q ss_pred HHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHH-HC
Q 001586 852 ILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-DY 930 (1049)
Q Consensus 852 ~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~-~~ 930 (1049)
...++..++.. ..+-+++..+...++.+++.+.|+++ .+.+..+.+.++ ++++++ .+.+..+++++|. ++
T Consensus 276 ~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~--~~v~~~-----~~~~~~~l~~~ll~~~ 346 (385)
T PRK09276 276 IQEAGIAALNG-PQEVVEELRKIYQERRDILVEGLRKL-GLEVEPPKATFY--VWAPVP-----KGYTSAEFATLLLDKA 346 (385)
T ss_pred HHHHHHHHHcC-cHHHHHHHHHHHHHHHHHHHHHHHhC-CCcccCCCcceE--EEEECC-----CCCCHHHHHHHHHHhC
Confidence 11112222221 22334455555667788899999875 222212222221 345554 2456788888876 57
Q ss_pred CcccCCC-CCC--CCCEEEEEccCCCCHHHHHHHHHHH
Q 001586 931 GFHGPTM-SWP--VPGTLMIEPTESESKEELDRYCDAL 965 (1049)
Q Consensus 931 Gi~~~~~-~~p--~~~~lri~~t~~~t~eeid~fv~aL 965 (1049)
|+.+... .|. ..+++||++. .+++++...++.|
T Consensus 347 gi~v~~g~~f~~~~~~~~Ris~~--~~~~~l~~~l~~l 382 (385)
T PRK09276 347 GVVVTPGNGFGEYGEGYFRIALT--VPDERIEEAVERI 382 (385)
T ss_pred CEEECCchhhCCCCCCeEEEEeC--CCHHHHHHHHHHH
Confidence 9986532 232 2478999986 3455555555544
No 377
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.56 E-value=9.6e-13 Score=154.15 Aligned_cols=272 Identities=15% Similarity=0.132 Sum_probs=178.1
Q ss_pred HHHHHHHHHHhCCCCcceEeccchHHHHHHHHHHhhhccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCcc---h
Q 001586 214 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK---D 290 (1049)
Q Consensus 214 ~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a~~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~~~---~ 290 (1049)
.++++.+|++.|.+. ..++.+|++++..+++++ .. +||+|+++...|+.+...++..++..|++++.++.. +
T Consensus 63 ~~Le~~lA~l~g~~~--~v~~~sG~~Ai~~~l~al-l~--pGD~Vvv~~p~Y~~t~~~~~~~~~~~g~~v~~v~~~d~~~ 137 (405)
T PRK08776 63 DLLGEALAELEGGAG--GVITATGMGAINLVLNAL-LQ--PGDTLVVPHDAYGGSWRLFNALAKKGHFALITADLTDPRS 137 (405)
T ss_pred HHHHHHHHHHhCCCc--eEEEcCHHHHHHHHHHHH-hC--CCCEEEEccCCchHHHHHHHHHHHhcCcEEEEECCCCHHH
Confidence 346689999999753 457778887776665555 23 899999999999998887777677789999998764 4
Q ss_pred hhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCCCC
Q 001586 291 IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGG 367 (1049)
Q Consensus 291 l~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~p~~~GaDivvgs~-k~lg~P~~~GG 367 (1049)
+++ ++++|++|++++| |++|.+.|+++|+++||++|++++|+ +.++.+....|.++|+|++++|+ |.|++|- +
T Consensus 138 l~~~i~~~tklV~l~~P~NPtG~v~dl~~I~~la~~~gi~vIvD-~a~a~~~~~~pl~~gaDivv~S~tK~l~g~~---~ 213 (405)
T PRK08776 138 LADALAQSPKLVLIETPSNPLLRITDLRFVIEAAHKVGALTVVD-NTFLSPALQKPLEFGADLVLHSTTKYINGHS---D 213 (405)
T ss_pred HHHhcCcCCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEE-CCCcccccCCcccccCCEEEecCceeecCCC---C
Confidence 555 7788999999998 89999999999999999999999994 34454555567889999999998 7776442 1
Q ss_pred CceEEEEEc-hhHHhcCCCceeeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcchHHHH
Q 001586 368 PHAAFLATS-QEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTI 446 (1049)
Q Consensus 368 P~~G~l~~~-~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irrekaTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i 446 (1049)
-.+|.+.++ +++.+++- ..+..-+ .+ ..++- .++...|.+-++.+
T Consensus 214 ~~~G~vv~~~~~l~~~l~-------------------------~~~~~~g---~~-~s~~~-----a~l~~~gl~tl~~r 259 (405)
T PRK08776 214 VVGGAVVARDAELHQQLV-------------------------WWANALG---LT-GSPFD-----AFLTLRGLRTLDAR 259 (405)
T ss_pred ceEEEEEeCCHHHHHHHH-------------------------HHHHhcC---CC-CCHHH-----HHHHHhhhCcHHHH
Confidence 124555554 44433320 0000001 11 01211 11233444556667
Q ss_pred HHHHHHHHHHHHHHhhcCCCeE-EcCC-----C-----------CcceEEEecCC-H---HHHHHHHHH--cCCeee---
Q 001586 447 AQRVHGLAGTFALGLKKLGTVE-VQGL-----P-----------FFDTVKVKCAD-A---HAIASAAYK--IEMNLR--- 500 (1049)
Q Consensus 447 a~~~~~~a~~l~~~L~~~g~~~-v~~~-----~-----------~~~~v~i~~~~-~---~~v~~~L~~--~gI~~~--- 500 (1049)
.++..+++..+++.|++...++ |.-+ + +..-|+|.+++ . ..+.+.|.- .+..++
T Consensus 260 ~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~f~~~l~l~~~~~s~G~~~ 339 (405)
T PRK08776 260 LRVHQENADAIAALLDGHAAVNQVYYPGLASHPGHALAARQQKGFGAMLSFELEGGEAAVRAFVDGLRYFTLAESLGGVE 339 (405)
T ss_pred HHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCcCHHHHHhcCCCCceEEEEEEcCCHHHHHHHHHhCCcceEccCCCCCc
Confidence 7788899999999999875454 2211 1 11247777754 2 344444432 122110
Q ss_pred ------------e----------ecCCeEEEEeccCCCHHHHHHHHHHHh
Q 001586 501 ------------V----------VDSNTVTASFDETTTLEDVDKLFIVFA 528 (1049)
Q Consensus 501 ------------~----------~~~~~vris~~~~~t~edid~lv~aL~ 528 (1049)
. +.++.||+|++.-+.++=|+.|-++|.
T Consensus 340 sl~~~p~~~~h~~~~~~~~~~~gi~~~liR~svGlE~~~dli~dl~~al~ 389 (405)
T PRK08776 340 SLIAHPASMTHAAMTAEARAAAGISDGLLRLSVGIESAEDLLIDLRAGLA 389 (405)
T ss_pred eEEECCcccccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHHH
Confidence 0 124679999998766665677777775
No 378
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.56 E-value=8.7e-13 Score=155.95 Aligned_cols=286 Identities=15% Similarity=0.143 Sum_probs=179.1
Q ss_pred HHHHHHHHHHhhC--CCccccccCchHHHHHHHHHHHHHHHHhcCC-------------------CC--CCEEE-EcCCC
Q 001586 634 FNNLGEWLCTITG--FDSFSLQPNAGAAGEYAGLMVIRAYHKARGD-------------------HH--RNVCI-IPVSA 689 (1049)
Q Consensus 634 i~el~~~la~l~G--~~~~~l~~~sGa~ge~a~l~air~y~~~~G~-------------------~~--r~~VL-ip~sa 689 (1049)
.+++.+++++++. ++. .++.+||+++++++++.+|.|...+|. ++ +.+|| ...++
T Consensus 107 a~~l~~~l~~~~p~~~~~-v~f~~SGsEAvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~sy 185 (464)
T TIGR00699 107 AKILKEGILKVAPKGQDQ-VWTGMSGSDANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGSPDLSILSFKGAF 185 (464)
T ss_pred HHHHHHhHHhhCCCCcCE-EEEeCCcHHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccCCcCCEEEEECCCc
Confidence 3334444455664 333 477899999999999999988643221 01 23566 68889
Q ss_pred CCccHHHHHhcCC-----------EEEEEcCCCC--------------CCCCHHHHHHHHHhcCCCeEEEEEEcC-Cccc
Q 001586 690 HGTNPATAAMCGM-----------KIVSVGTDAK--------------GNINIEELRKAAEANRDNLSTLMVTYP-STHG 743 (1049)
Q Consensus 690 Hg~~pa~a~~~G~-----------~Vv~V~~d~~--------------g~iD~~~L~~~i~~~~~~taaV~it~P-n~~G 743 (1049)
||....+....|- .+..+|+... ..-++++|+++++++.+++++|+++.. +..|
T Consensus 186 HG~t~~als~t~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~~iAAvI~EPv~g~~G 265 (464)
T TIGR00699 186 HGRLFGSLSTTRSKPIHKLDIPAFDWPQAPFPSLKYPLEEHVKENAKEEQRCLEEVEDLIKKWHKPVAAIIVEPIQSEGG 265 (464)
T ss_pred CCccHHHHHhcCCccccccCCCCCCceecCCCCcccccccccccchhHHHHHHHHHHHHHHhcCCcEEEEEEeCCCCCCC
Confidence 9987765443221 2233333210 012467788899877678999988765 3457
Q ss_pred cccc---cHHHHHHHHHHcCCEEEEeccccccccCcCCCCcc------C----CcEEEeCCCcccccCCCCCCCceeEEE
Q 001586 744 VYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI------G----ADVCHLNLHKTFCIPHGGGGPGMGPIG 810 (1049)
Q Consensus 744 ~i~~---di~eI~~lah~~G~ll~vD~A~~~a~~gl~~Pg~~------G----aDi~~~s~hK~f~~P~g~GGPg~G~i~ 810 (1049)
++.+ .+++|.++|+++|+++++|++ +.|+.+.|.+ | +|++++ .|.++ +|| ++.
T Consensus 266 ~~~~~~~yl~~lr~lc~~~g~lLI~DEV----~tGfGrtG~~fa~e~~gv~~~PDi~t~--gK~lg----~gG----~~~ 331 (464)
T TIGR00699 266 DNHASPDFFRKLRDITKKHNVAFIVDEV----QTGVGATGKFWAHEHWNLDDPPDMVTF--SKKFQ----TAG----YFF 331 (464)
T ss_pred CcCCCHHHHHHHHHHHHHcCCEEEEeee----eeCCCCCcchhHHHhcCCCCCCCEEEe--hhhhc----cCC----ccc
Confidence 7652 399999999999999999987 4555555532 2 899877 48662 222 222
Q ss_pred EcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc-
Q 001586 811 VKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH- 889 (1049)
Q Consensus 811 ~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~- 889 (1049)
.++.+.+. +. ....+++.|+++.++++.+.|..+-.+++.+ +..+...+|.++|+++
T Consensus 332 ~~~~~~~~--~~-----------------~~~~~T~~gnp~~~aaa~a~L~~l~~~~l~~---~~~~~g~~l~~~L~~l~ 389 (464)
T TIGR00699 332 HDPAFRPN--KP-----------------YRQFNTWMGDPSRALILREIIQEIKRKDLLE---NVAHVGDYLYTGLEDLQ 389 (464)
T ss_pred cchhccCC--CC-----------------cccccCCCCCHHHHHHHHHHHHHHHhcCHHH---HHHHHHHHHHHHHHHHH
Confidence 22211110 00 0011224467777788888888887766544 3445667888888764
Q ss_pred --CC-ee--ec--cCCCceeeEEEEeccCccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEccCCCCHHHHHHHH
Q 001586 890 --YP-IL--FR--GVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYC 962 (1049)
Q Consensus 890 --~~-v~--~~--g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~eeid~fv 962 (1049)
+. ++ .. | .|. + +-+.++. ......+.+.+.++|+.+.... .+.+|+.|+..+|++|||.++
T Consensus 390 ~~~~~~i~~vRg~G-~Gl-m--~gie~~~-----~~~~~~i~~~~~~~Gvl~~~~g---~~~ir~~Ppl~it~~eid~~~ 457 (464)
T TIGR00699 390 KKYPEFIQNLRGKG-RGT-F--IAWDTPD-----EAKRDKLLKKARNNGVNIGGCG---VKAIRLRPMLVFQKHHADIFL 457 (464)
T ss_pred HhCCCceeeecccC-eEE-E--EEEecCC-----HHHHHHHHHHHHHCCcEEecCC---CCeEEEeCCCCCCHHHHHHHH
Confidence 33 21 11 2 121 1 2233321 1124678888999999986432 378999999999999999999
Q ss_pred HHHHHH
Q 001586 963 DALISI 968 (1049)
Q Consensus 963 ~aL~~i 968 (1049)
++|.++
T Consensus 458 ~~l~~~ 463 (464)
T TIGR00699 458 EIISKI 463 (464)
T ss_pred HHHHHh
Confidence 999875
No 379
>PLN02242 methionine gamma-lyase
Probab=99.56 E-value=9.8e-14 Score=162.98 Aligned_cols=220 Identities=18% Similarity=0.183 Sum_probs=149.6
Q ss_pred HHHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHH-----HhcCCEEEEEc
Q 001586 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATA-----AMCGMKIVSVG 708 (1049)
Q Consensus 634 i~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a-----~~~G~~Vv~V~ 708 (1049)
..++++.++++.|.+.+ +..++|.++...+++++. .++++||++...++.+.... ...|++++.++
T Consensus 78 ~~~LE~~lA~l~g~~~~-l~~~sG~~Ai~~al~al~--------~~GD~Vl~~~~~Y~~~~~~~~~~~~~~~G~~~~~~d 148 (418)
T PLN02242 78 VLNLGRQMAALEGTEAA-YCTASGMSAISSVLLQLC--------SSGGHVVASNTLYGGTHALLAHFLPRKCNITTTFVD 148 (418)
T ss_pred HHHHHHHHHHHhCCCeE-EEEccHHHHHHHHHHHHh--------CCCCEEEEcCCcHHHHHHHHHHhhhhccCceEEEcC
Confidence 45789999999999875 456777777755554432 25788998876554443332 34788888887
Q ss_pred CCCCCCCCHHHHHHHHHhcCC-CeEEEEEEcCC-ccccccccHHHHHHHHHHcCCEEEEeccccccccCcCCCCccCCcE
Q 001586 709 TDAKGNINIEELRKAAEANRD-NLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADV 786 (1049)
Q Consensus 709 ~d~~g~iD~~~L~~~i~~~~~-~taaV~it~Pn-~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~Pg~~GaDi 786 (1049)
. .|+++|+++++ + ++++|++++|+ .+|.+. |+++|+++||++|+++++|.++. . ....|..+|+|+
T Consensus 149 ~-----~d~e~l~~~i~---~~~tklV~lesp~NPtG~v~-dl~~I~~la~~~gi~livDea~~--~-~~~~~~~~g~di 216 (418)
T PLN02242 149 I-----TDLEAVKKAVV---PGKTKVLYFESISNPTLTVA-DIPELARIAHEKGVTVVVDNTFA--P-MVLSPARLGADV 216 (418)
T ss_pred C-----CCHHHHHHhcC---cCCCEEEEEecCCCCCCccc-CHHHHHHHHHHhCCEEEEECCCC--c-cCCCHHHcCCcE
Confidence 6 38999999996 5 59999999994 599887 89999999999999999998753 1 223566779999
Q ss_pred EEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchh
Q 001586 787 CHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSK 866 (1049)
Q Consensus 787 ~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~e 866 (1049)
++.|++|+|+.+ |...+|++++++++...+.... ..+....+. +. . . -.+++...+.+
T Consensus 217 vv~S~SK~l~g~---g~~~gG~iv~~~~li~~l~~~~---------~~~~~~~g~-~~----~---~--~~A~l~~~~l~ 274 (418)
T PLN02242 217 VVHSISKFISGG---ADIIAGAVCGPAELVNSMMDLH---------HGALMLLGP-TM----N---P--KVAFELSERLP 274 (418)
T ss_pred EEEeCccccCCC---CCceEEEEEcCHHHHHHHHHHh---------hhhhhccCC-CC----C---H--HHHHHHHcCCC
Confidence 999999998521 2223688888876554432100 000000111 11 0 1 12334445555
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcc-CCeeecc
Q 001586 867 GLTEASKIAILNANYMAKRLEKH-YPILFRG 896 (1049)
Q Consensus 867 Gl~~~~~~~~~~a~yL~~~L~~~-~~v~~~g 896 (1049)
-+..+.++..++++++++.|+++ +++.|++
T Consensus 275 tl~~r~~~~~~~a~~la~~L~~~~~~V~yP~ 305 (418)
T PLN02242 275 HLSLRMKEHCRRAMEYAKRMKELGLKVIYPG 305 (418)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhCCCEEECCC
Confidence 66667778889999999999986 4555543
No 380
>PRK10534 L-threonine aldolase; Provisional
Probab=99.56 E-value=1.1e-13 Score=158.19 Aligned_cols=282 Identities=13% Similarity=0.150 Sum_probs=167.2
Q ss_pred HHHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCc-cHHH-HHhcC-CEEEEEcCC
Q 001586 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGT-NPAT-AAMCG-MKIVSVGTD 710 (1049)
Q Consensus 634 i~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~-~pa~-a~~~G-~~Vv~V~~d 710 (1049)
..++++.+++++|.+... ..++|++++...+.+. . .++++|+++...|.. +... +...| ++++.++.+
T Consensus 36 ~~~L~~~la~~~g~~~~~-v~~~g~~a~~~~l~~~-~-------~~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (333)
T PRK10534 36 VNALQDYAAELSGKEAAL-FLPTGTQANLVALLSH-C-------ERGEEYIVGQAAHNYLYEAGGAAVLGSIQPQPIDAA 106 (333)
T ss_pred HHHHHHHHHHHhCCCeEE-EeCchHHHHHHHHHHh-c-------CCCCeeEEechhhhhHhcCCchHHhcCceEEeecCC
Confidence 447889999999998764 4445555564333322 1 246788887766632 2111 23333 788888887
Q ss_pred CCCCCCHHHHHHHHHhcC---CCeEEEEEEcCCcccccc--ccHHHHHHHHHHcCCEEEEecccccccc-CcCCC-C--c
Q 001586 711 AKGNINIEELRKAAEANR---DNLSTLMVTYPSTHGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQV-GLTSP-G--Y 781 (1049)
Q Consensus 711 ~~g~iD~~~L~~~i~~~~---~~taaV~it~Pn~~G~i~--~di~eI~~lah~~G~ll~vD~A~~~a~~-gl~~P-g--~ 781 (1049)
+++.+|+++|+++++++. .++++|++++|++ |.+. +++++|+++|+++|++|++|+|+...-. ....+ . .
T Consensus 107 ~~~~~d~~~l~~~i~~~~~~~~~~~lv~l~np~~-G~v~~~~~l~~i~~~~~~~~~~lvvDEA~~~~~~~~~~~~~~~~~ 185 (333)
T PRK10534 107 ADGTLPLDKVAAKIKPDDIHFARTRLLSLENTHN-GKVLPREYLKQAWEFTRERNLALHVDGARIFNAVVAYGCELKEIT 185 (333)
T ss_pred CCCCCCHHHHHHhhcccCcCcccceEEEEecCCC-CeecCHHHHHHHHHHHHHcCCeEEeeHHHHHHHHHHcCCCHHHHH
Confidence 789999999999996210 1688999999885 8764 2466677889999999999997542110 00111 1 1
Q ss_pred cCCcEEEeCCCcccccCCCCCCCcee-EEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHH
Q 001586 782 IGADVCHLNLHKTFCIPHGGGGPGMG-PIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYI 860 (1049)
Q Consensus 782 ~GaDi~~~s~hK~f~~P~g~GGPg~G-~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l 860 (1049)
.+.|.++.+++|.|+++ +| +++.++++...+.. + +.....++.. .+..++++.+.+
T Consensus 186 ~~~~~~~~s~SK~~~~~-------~G~~~~~~~~~i~~~~~--~----------~~~~~~~~~~----~~~~~a~~~~~l 242 (333)
T PRK10534 186 QYCDSFTICLSKGLGTP-------VGSLLVGNRDYIKRARR--W----------RKMTGGGMRQ----AGILAAAGLYAL 242 (333)
T ss_pred hcCCEEEEEeEcCCCCc-------ccceEEcCHHHHHHHHH--H----------HHHhCCchhh----HHHHHHHHHHHH
Confidence 13475556788987543 34 56666666544310 0 0000011110 111122222222
Q ss_pred HHHchhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHHHCCcccCCCCC
Q 001586 861 AMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSW 939 (1049)
Q Consensus 861 ~~lG~eGl~~~~~~~~~~a~yL~~~L~~~-~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~ 939 (1049)
.. ..+..++..++++++.++|+++ +++. + + ..+-+.++++ +.+..++.+.|.++||.+...
T Consensus 243 ~~-----~~~~~~~~~~~r~~l~~~L~~~g~~~~-~-~---~~nfv~~~~~------~~~~~~~~~~l~~~gi~v~~~-- 304 (333)
T PRK10534 243 KH-----NVARLQEDHDNAAWLAEQLREAGADVM-R-Q---DTNMLFVRVG------EEQAAALGEYMRERNVLINAS-- 304 (333)
T ss_pred Hh-----hHHHHHHHHHHHHHHHHHHHhCCCccC-C-C---CceEEEEECC------chhHHHHHHHHHHcCeeecCC--
Confidence 21 1223333445678999999875 4432 1 1 1222345543 124568889999999998522
Q ss_pred CCCCEEEEEccCCCCHHHHHHHHHHHHHHH
Q 001586 940 PVPGTLMIEPTESESKEELDRYCDALISIR 969 (1049)
Q Consensus 940 p~~~~lri~~t~~~t~eeid~fv~aL~~i~ 969 (1049)
..+|++.+...|++|+++++++|+.++
T Consensus 305 ---~~~rl~~~~r~t~e~~~~~~~~l~~~~ 331 (333)
T PRK10534 305 ---PIVRLVTHLDVSREQLAEVVAHWRAFL 331 (333)
T ss_pred ---ceEEEEEEeCCCHHHHHHHHHHHHHHh
Confidence 257887766679999999999998654
No 381
>PRK06460 hypothetical protein; Provisional
Probab=99.56 E-value=1.2e-12 Score=152.13 Aligned_cols=213 Identities=21% Similarity=0.223 Sum_probs=148.7
Q ss_pred HHHHHHHHHHHHhCCCCcceEeccchHHHHHHHHHHhhhccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCcch-
Q 001586 212 SLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKD- 290 (1049)
Q Consensus 212 ~l~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a~~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~~~~- 290 (1049)
...++++.+|++.|.+. ...+.+|++++.++++++ . ++||+||++...++.+...+...++..|++++.++.++
T Consensus 46 ~~~~L~~~lA~l~g~~~--~v~~~sG~~ai~~~l~al-~--~~Gd~Vl~~~~~~~~ty~~~~~~~~~~G~~v~~~~~~~~ 120 (376)
T PRK06460 46 TVLELTKKIVELENAEM--GVAFSSGMGAISTTALAL-L--KPGNSVLVHRDMFGRSYRFFTDYLKNWGVNVDASNPGSD 120 (376)
T ss_pred cHHHHHHHHHHHhCCCc--EEEeCCHHHHHHHHHHHH-h--CCCCEEEEecCCcCcHHHHHHHHHHhhCcEEEEECCCCH
Confidence 34567789999999876 345677777666655554 2 38899999998887666666665677899999887643
Q ss_pred --hhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCC
Q 001586 291 --IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGY 365 (1049)
Q Consensus 291 --l~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~p~~~GaDivvgs~-k~lg~P~~~ 365 (1049)
+++ +.+++++|++.+| |++|.+.|+++|+++||++|++++|+ +..+.+....+.++|+||++.|. |.|++ .
T Consensus 121 ~~l~~~~~~~tklV~l~sp~NPtG~v~d~~~I~~la~~~g~~vivD-ea~~~~~~~~~l~~~~divv~S~sK~l~G---~ 196 (376)
T PRK06460 121 NIIEKAKSKRYDVVFVENITNPLLRVVDITELSKVCKENGSILIVD-ATFSTPINQKPLELGADIVVHSASKFLAG---H 196 (376)
T ss_pred HHHHHhcCCCceEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEE-CCcCccccCChhhcCCCEEEeecceeccC---C
Confidence 334 4678999999998 78999999999999999999999994 34444433345568999999997 77652 2
Q ss_pred CCCceEEEEEchhHHhcCCCceeeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcchHHH
Q 001586 366 GGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKT 445 (1049)
Q Consensus 366 GGP~~G~l~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irrekaTsni~t~~~l~a~~aa~y~~~~g~~Gl~~ 445 (1049)
|+.-+|+++.++++.+++. ..++. .++|. ++. +.|+...+.+-++.
T Consensus 197 ~~~~~G~~~~~~~l~~~l~-------------------------~~~~~---~g~~~-~~~-----~a~~~l~~~~~l~~ 242 (376)
T PRK06460 197 NDVIAGLAAGYGKLLNVID-------------------------QMRRT---LGTSL-DPH-----AAYLTLRGIKTLKI 242 (376)
T ss_pred CCceEEEEecCHHHHHHHH-------------------------HHHHh---cCCCC-CHH-----HHHHHHhchhhHHH
Confidence 2234688887777655431 00111 12221 121 12334445566777
Q ss_pred HHHHHHHHHHHHHHHhhcCCCe
Q 001586 446 IAQRVHGLAGTFALGLKKLGTV 467 (1049)
Q Consensus 446 ia~~~~~~a~~l~~~L~~~g~~ 467 (1049)
..+++.+++.++++.|++.+.+
T Consensus 243 r~~~~~~n~~~l~~~L~~~p~v 264 (376)
T PRK06460 243 RMDVINRNAEQIAEFLEGHPKV 264 (376)
T ss_pred HHHHHHHHHHHHHHHHHcCCCc
Confidence 8888899999999999987434
No 382
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=99.56 E-value=9.2e-13 Score=152.96 Aligned_cols=289 Identities=16% Similarity=0.172 Sum_probs=176.5
Q ss_pred HHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCEEEEEcCCCCCC
Q 001586 635 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGN 714 (1049)
Q Consensus 635 ~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~Vv~V~~d~~g~ 714 (1049)
.++++.+++.+|++...+..++|++.... .+++.+. .+++.|+++...+..+...+...|.+++.+|++.++
T Consensus 70 ~~Lr~~ia~~~~~~~~~I~it~G~~~~l~--~~~~~~~-----~~gd~vlv~~p~y~~~~~~~~~~g~~~~~vp~~~~~- 141 (369)
T PRK08153 70 HDLRHALAAHHGVAPENIMVGEGIDGLLG--LIVRLYV-----EPGDPVVTSLGAYPTFNYHVAGFGGRLVTVPYRDDR- 141 (369)
T ss_pred HHHHHHHHHHhCCCHHHEEEcCCHHHHHH--HHHHHhc-----CCCCEEEECCCcchHHHHHHHHcCCeEEEeeCCCCC-
Confidence 36778888888987766666777653322 2222221 256889998875555555577899999999986654
Q ss_pred CCHHHHHHHHHhcCCCeEEEEEEcCC-ccccccccHHHHHHHHHH--cCCEEEEecccccccc--CcCCC-CccCCc-EE
Q 001586 715 INIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHD--NGGQVYMDGANMNAQV--GLTSP-GYIGAD-VC 787 (1049)
Q Consensus 715 iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~~di~eI~~lah~--~G~ll~vD~A~~~a~~--gl~~P-g~~GaD-i~ 787 (1049)
+|++++.+++. .+++++|++++|+ .+|.+- +.+++.++++. +|+++++|.++.. ++ +-..+ .....+ ++
T Consensus 142 ~~~~~l~~~~~--~~~~~~i~l~~P~NPtG~~~-~~~~l~~l~~~~~~~~~lI~DE~y~~-~~~~~~~~~~~~~~~~~i~ 217 (369)
T PRK08153 142 EDLDALLDAAR--RENAPLVYLANPDNPMGSWH-PAADIVAFIEALPETTLLVLDEAYCE-TAPAGAAPPIDTDDPNVIR 217 (369)
T ss_pred CCHHHHHHHhc--ccCCcEEEEeCCCCCCCCCC-CHHHHHHHHHhCCCCcEEEEeCchhh-hcCcccchhhhhcCCCEEE
Confidence 89999887764 2578889999995 589886 45666555543 3899999998531 11 10011 011122 55
Q ss_pred EeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhh
Q 001586 788 HLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (1049)
Q Consensus 788 ~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eG 867 (1049)
..++.|+|++ .|-++|++++++++.+.+... . ...+++ .....++.+++. ..+-
T Consensus 218 ~~SfSK~~g~----~GlRiG~~v~~~~~~~~l~~~------------~--~~~~~s------~~~q~~~~~~l~--~~~~ 271 (369)
T PRK08153 218 MRTFSKAYGL----AGARVGYAIGAPGTIKAFDKV------------R--NHFGMN------RIAQAAALAALK--DQAY 271 (369)
T ss_pred EecchHhccC----cchheeeeecCHHHHHHHHHh------------h--cCCCCC------HHHHHHHHHHhc--CHHH
Confidence 6677787754 477889999887665543210 0 011111 122222333332 1223
Q ss_pred HHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHHHCCcccCCCC-CCCCCEE
Q 001586 868 LTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMS-WPVPGTL 945 (1049)
Q Consensus 868 l~~~~~~~~~~a~yL~~~L~~~-~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~-~p~~~~l 945 (1049)
+++..+...++.+++.+.|++. +.+ ++ .+..+ +.++++. .......+.+.|.++||.+.... .+..+++
T Consensus 272 ~~~~~~~~~~~r~~~~~~L~~~g~~~-~p--~~~~f--~~~~~~~----~~~~a~~l~~~l~~~Gi~v~~p~~~~~~~~i 342 (369)
T PRK08153 272 LAEVVGKIAAARDRIAAIARANGLTP-LP--SATNF--VAIDCGR----DGAFARAVLDGLIARDIFVRMPGVAPLDRCI 342 (369)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCcc-CC--CcCcE--EEEECCC----CcccHHHHHHHHHHCCeEEeeCCCCCCCCeE
Confidence 4445555566777888888764 322 11 12122 3345421 12356789999999999873211 1224789
Q ss_pred EEEccCCCCHHHHHHHHHHHHHHHHHHH
Q 001586 946 MIEPTESESKEELDRYCDALISIREEIA 973 (1049)
Q Consensus 946 ri~~t~~~t~eeid~fv~aL~~i~~~i~ 973 (1049)
||++. +++|+++|+++|+++....+
T Consensus 343 Ris~~---~~~~~~~~~~al~~~~~~~~ 367 (369)
T PRK08153 343 RVSCG---PDEELDLFAEALPEALEAAR 367 (369)
T ss_pred EEecC---CHHHHHHHHHHHHHHHHHhh
Confidence 99986 68999999999999876543
No 383
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.56 E-value=5.5e-13 Score=156.24 Aligned_cols=219 Identities=21% Similarity=0.227 Sum_probs=151.2
Q ss_pred HHHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHH----HHhcCCEEEEEcC
Q 001586 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGT 709 (1049)
Q Consensus 634 i~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~----a~~~G~~Vv~V~~ 709 (1049)
..++++.++++.|.+. .+..++|..+..+++++.. +++++||++...|+..... +...|++++.++.
T Consensus 66 ~~~Le~~iA~~~g~~~-~l~~~sG~~Ai~~al~~ll--------~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~ 136 (400)
T PRK06234 66 STEVENKLALLEGGEA-AVVAASGMGAISSSLWSAL--------KAGDHVVASDTLYGCTFALLNHGLTRYGVEVTFVDT 136 (400)
T ss_pred HHHHHHHHHHHhCCCc-EEEEcCHHHHHHHHHHHHh--------CCCCEEEEecCccchHHHHHHHHHhhCCeEEEEECC
Confidence 3478899999999865 4667778776644443321 2568899988777654332 4678999999986
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-ccccccccHHHHHHHHHHc--CCEEEEeccccccccCcCCCCccCCcE
Q 001586 710 DAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDN--GGQVYMDGANMNAQVGLTSPGYIGADV 786 (1049)
Q Consensus 710 d~~g~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~~di~eI~~lah~~--G~ll~vD~A~~~a~~gl~~Pg~~GaDi 786 (1049)
.|+++++++++ ++|++|++++|+ .+|.+. |+++|+++||++ |+++++|+++... .+..|..+|+|+
T Consensus 137 -----~d~e~l~~~i~---~~tklI~iesP~NPtG~v~-dl~~I~~la~~~~~~i~livDea~~~~--~~~~~l~~g~Di 205 (400)
T PRK06234 137 -----SNLEEVRNALK---ANTKVVYLETPANPTLKVT-DIKAISNIAHENNKECLVFVDNTFCTP--YIQRPLQLGADV 205 (400)
T ss_pred -----CCHHHHHHHhc---cCCeEEEEECCCCCCCCcC-CHHHHHHHHHhcCCCCEEEEECCCCch--hcCCchhhCCcE
Confidence 38999999997 789999999995 689887 799999999997 9999999986432 234666779999
Q ss_pred EEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchh
Q 001586 787 CHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSK 866 (1049)
Q Consensus 787 ~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~e 866 (1049)
++.|++|+|+.+ |...+|++++++++.+.+... +. ...++. +.+++ -+++...|-+
T Consensus 206 vv~S~sK~l~g~---g~~~gG~v~~~~~~~~~l~~~--~~---------~~~~g~-~l~p~---------~a~l~~~~l~ 261 (400)
T PRK06234 206 VVHSATKYLNGH---GDVIAGFVVGKEEFINQVKLF--GI---------KDMTGS-VIGPF---------EAFLIIRGMK 261 (400)
T ss_pred EEeeccccccCC---CCceeEEEEecHHHHHHHHHH--HH---------HHhcCC-CCCHH---------HHHHHHhccC
Confidence 999999998521 212369999887765543210 00 001111 11111 1223344455
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcc---CCeeecc
Q 001586 867 GLTEASKIAILNANYMAKRLEKH---YPILFRG 896 (1049)
Q Consensus 867 Gl~~~~~~~~~~a~yL~~~L~~~---~~v~~~g 896 (1049)
-+..+.++..+++.++++.|+++ -.+.|++
T Consensus 262 tl~~r~~~~~~na~~~a~~L~~~~~V~~V~~p~ 294 (400)
T PRK06234 262 TLQIRMEKHCKNAMKVAKFLESHPAVEKVYYPG 294 (400)
T ss_pred cHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCC
Confidence 56667777888999999999875 2344554
No 384
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.56 E-value=1.6e-13 Score=159.76 Aligned_cols=277 Identities=20% Similarity=0.207 Sum_probs=175.5
Q ss_pred HHHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHH---HhcCCEEEEEcCC
Q 001586 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATA---AMCGMKIVSVGTD 710 (1049)
Q Consensus 634 i~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a---~~~G~~Vv~V~~d 710 (1049)
..++++.++++.|.+.+ +..++|..|..+++.++. +++++||++...|+.....+ ...|++++.+.
T Consensus 55 ~~~lE~~lA~l~g~~~~-l~~~sG~~Ai~~~l~~ll--------~~GD~Vlv~~~~y~~~~~~~~~~~~~g~~v~~~~-- 123 (385)
T PRK08574 55 LRPLEEALAKLEGGVDA-LAFNSGMAAISTLFFSLL--------KAGDRVVLPMEAYGTTLRLLKSLEKFGVKVVLAY-- 123 (385)
T ss_pred HHHHHHHHHHHhCCCcE-EEeCCHHHHHHHHHHHHh--------CCCCEEEEcCCCchhHHHHHHHhhccCcEEEEEC--
Confidence 44788999999998764 556777776655544331 25789999988777665543 44688887765
Q ss_pred CCCCCCHHHHHHHHHhcCC-CeEEEEEEcC-CccccccccHHHHHHHHHHcCCEEEEeccccccccCcCCCCccCCcEEE
Q 001586 711 AKGNINIEELRKAAEANRD-NLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1049)
Q Consensus 711 ~~g~iD~~~L~~~i~~~~~-~taaV~it~P-n~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~Pg~~GaDi~~ 788 (1049)
.|+++|+++++ + +|++|++++| |.+|.+. |+++|+++||++|+++++|+++.. +....|-++|+|+++
T Consensus 124 ----~d~~~l~~~i~---~~~tklV~ie~p~NPtG~v~-dl~~I~~la~~~gi~livD~t~a~--~~~~~~l~~GaDivv 193 (385)
T PRK08574 124 ----PSTEDIIEAIK---EGRTKLVFIETMTNPTLKVI-DVPEVAKAAKELGAILVVDNTFAT--PLLYRPLRHGADFVV 193 (385)
T ss_pred ----CCHHHHHHhcC---ccCceEEEEECCCCCCCEec-CHHHHHHHHHHcCCEEEEECCCCc--cccCChhhhCCcEEE
Confidence 36899999997 5 8999999999 4689887 799999999999999999998642 223456678999999
Q ss_pred eCCCcccccCCCCCCCc---eeEEEEc-ccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHc
Q 001586 789 LNLHKTFCIPHGGGGPG---MGPIGVK-KHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMG 864 (1049)
Q Consensus 789 ~s~hK~f~~P~g~GGPg---~G~i~~~-~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG 864 (1049)
.|++|+|+ ||+ .|+++++ +.+...+-. . + ...+...+ ++ .+++...|
T Consensus 194 ~S~sK~l~------g~~d~~gG~vi~~~~~~~~~~~~--~----------~-~~~g~~~~-p~---------~a~l~l~~ 244 (385)
T PRK08574 194 HSLTKYIA------GHNDVVGGVAVAWSGEFLEELWE--W----------R-RRLGTIMQ-PF---------EAYLVLRG 244 (385)
T ss_pred eeCceeec------CCCCceeEEEEECcHHHHHHHHH--H----------H-HhcCCCCC-HH---------HHHHHHcc
Confidence 99999984 443 4645554 444333210 0 0 00111111 11 13344555
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhccC---CeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHHH-CCcccCCCCCC
Q 001586 865 SKGLTEASKIAILNANYMAKRLEKHY---PILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMD-YGFHGPTMSWP 940 (1049)
Q Consensus 865 ~eGl~~~~~~~~~~a~yL~~~L~~~~---~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~-~Gi~~~~~~~p 940 (1049)
-+-+..+.++..+++.++++.|+++. .|.|++-. ..+..+++++... .|+
T Consensus 245 l~tL~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~------------------~~~~~~~~~~~~~~~g~-------- 298 (385)
T PRK08574 245 LKTLEVRFERQCRNAMAIAEFLSEHPKVAEVYYPGLP------------------SDPYHGVAKRLFGKDLY-------- 298 (385)
T ss_pred cCcHHHHHHHHHHHHHHHHHHHHcCCCcCEEECCCCC------------------CCchHHHHHHhCCCCCc--------
Confidence 56677788888899999999998752 24443310 1234566666432 121
Q ss_pred CCCEEEEEccCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCcccccc
Q 001586 941 VPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKVTCLFLHH 996 (1049)
Q Consensus 941 ~~~~lri~~t~~~t~eeid~fv~aL~~i~~~i~~i~~g~~~~~~~~l~~~ph~~~~ 996 (1049)
++.+.|.+ ..+.++..+|++.|+-+. ...++ | +...|...|-.+.+
T Consensus 299 -g~~~s~~l--~~~~~~~~~~~~~l~l~~-~~~s~--G----~~~sl~~~~~~~~~ 344 (385)
T PRK08574 299 -GGVVSFRV--KGGRDAVLKFLRSLKLIK-PSPSL--G----GVESLATYPVKSAA 344 (385)
T ss_pred -ceEEEEEe--CCCHHHHHHHHHcCCcce-EccCC--C----CCcceeeCCCcCCc
Confidence 23333333 345777888888886322 11121 2 45555555555554
No 385
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.56 E-value=3.5e-13 Score=158.63 Aligned_cols=153 Identities=20% Similarity=0.226 Sum_probs=121.1
Q ss_pred HHHHHHHHHhCCCCcceEeccchHHHHHHHHHHhhhccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc---chh
Q 001586 215 NFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---KDI 291 (1049)
Q Consensus 215 e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a~~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~~---~~l 291 (1049)
++++.+|++.|.+. +.++.+|++++.++++++. . +||+||++...|+.+...+....+..|+++.+++. +++
T Consensus 62 ~Le~~lA~l~g~~~--~l~~ssG~~Ai~~al~al~-~--~Gd~Vl~~~~~Y~~t~~~~~~~l~~~gi~v~~~d~~d~e~l 136 (425)
T PRK06084 62 VLEQRVAALEGGVG--ALAVASGMAAITYAIQTIA-E--AGDNIVSVAKLYGGTYNLLAHTLPRIGIETRFAAHDDIAAL 136 (425)
T ss_pred HHHHHHHHHhCCCc--eeEehhHHHHHHHHHHHHh-C--CCCEEEEeCCCcchHHHHHHHhcccceeEEEEECCCCHHHH
Confidence 56789999999654 6688899988887776652 2 78999999999988887776655667999988865 455
Q ss_pred hc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCCCCC
Q 001586 292 DY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGGP 368 (1049)
Q Consensus 292 ~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~p~~~GaDivvgs~-k~lg~P~~~GGP 368 (1049)
++ +++++++|++++| |++|.+.|+++|+++||++|++++|+ +.++.+....|.++|+||+++|. |.|++| |..
T Consensus 137 e~ai~~~tklV~lesp~NPtG~v~dl~~I~~la~~~~i~vVvD-~a~a~~~~~~p~~~gaDivv~S~tK~l~G~---g~~ 212 (425)
T PRK06084 137 EALIDERTKAVFCESIGNPAGNIIDIQALADAAHRHGVPLIVD-NTVATPVLCRPFEHGADIVVHSLTKYIGGH---GTS 212 (425)
T ss_pred HHHhccCCcEEEEeCCCCCCCeecCHHHHHHHHHHcCCEEEEE-CCCcccccCChhhcCCCEEEECchhccccc---ccc
Confidence 55 7788999999988 89999999999999999999999994 45676767777889999999998 777643 233
Q ss_pred ceEEEEEc
Q 001586 369 HAAFLATS 376 (1049)
Q Consensus 369 ~~G~l~~~ 376 (1049)
-+|+++.+
T Consensus 213 ~gG~v~~~ 220 (425)
T PRK06084 213 IGGIVVDS 220 (425)
T ss_pred eeEEEEeC
Confidence 34555543
No 386
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=99.56 E-value=1.9e-13 Score=151.34 Aligned_cols=327 Identities=17% Similarity=0.183 Sum_probs=199.5
Q ss_pred hhhhcHHHHHHHHHHHHHHhhCCCc--cccccCchHHHHHHHHHHHHHHHHh-----cCCC-CCCEEE-EcCCCCCccHH
Q 001586 625 DQAQGYQEMFNNLGEWLCTITGFDS--FSLQPNAGAAGEYAGLMVIRAYHKA-----RGDH-HRNVCI-IPVSAHGTNPA 695 (1049)
Q Consensus 625 e~~~G~~~~i~el~~~la~l~G~~~--~~l~~~sGa~ge~a~l~air~y~~~-----~G~~-~r~~VL-ip~saHg~~pa 695 (1049)
|+.++..-+..++-..+.++.|.+. ..++..+|+-.+.-++.+.| |... +|-. -++-|+ .++.+|-+.-+
T Consensus 134 EiAPvF~lmE~~vl~km~~ivGw~~~~DgIf~pggsisn~Ya~~~Ar-yk~~Pe~K~~Gm~~~p~lilFtSeesHYSi~k 212 (510)
T KOG0629|consen 134 EIAPVFVLMEEEVLAKMREIVGWEEGGDGIFAPGGSISNMYAMNCAR-YKNFPEVKTKGMFALPPLILFTSEESHYSIKK 212 (510)
T ss_pred EecceEEeehHHHHHHHHHHhCCCCCCCceecCCchhHHHHHHHHHH-hhcCchhhhhhhhcCCcEEEEecccchhhHHH
Confidence 6677766677888899999999876 34555556555533333333 3221 2211 123344 68888888888
Q ss_pred HHHhcC---CEEEEEcCCCCCCCCHHHHHHHHHhcCCC---eEEEEEEcCCc-cccccccHHHHHHHHHHcCCEEEEecc
Q 001586 696 TAAMCG---MKIVSVGTDAKGNINIEELRKAAEANRDN---LSTLMVTYPST-HGVYEEGIDEICKIIHDNGGQVYMDGA 768 (1049)
Q Consensus 696 ~a~~~G---~~Vv~V~~d~~g~iD~~~L~~~i~~~~~~---taaV~it~Pn~-~G~i~~di~eI~~lah~~G~ll~vD~A 768 (1049)
.|++.| ..++.|++|+.|.++++|||++|-+.+.+ +..|-.+..+| .|.|| |+..|+++|++|+.|+|||+|
T Consensus 213 aAa~lg~gtd~c~~v~t~e~Gkm~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAFD-dL~~iadiC~k~~lWmHvDAA 291 (510)
T KOG0629|consen 213 AAAFLGLGTDHCIKVKTDERGKMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAFD-DLNGIADICEKHKLWMHVDAA 291 (510)
T ss_pred HHHHhccCCceeEEecccccCccchHHHHHHHHHHHhcCCCCeEEEecCCceeeeccC-cHHHHHHHHHhcCEEEEeecc
Confidence 888888 68999999999999999999999765555 56666666665 89999 899999999999999999987
Q ss_pred ccccccC-cC-C-------CCccCCcEEEeCCCcccccCCCCCCCceeEEEEcc-cccccCCCC---ccccCCCCCCCCC
Q 001586 769 NMNAQVG-LT-S-------PGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKK-HLAPFLPSH---PVVSTGGIPAPEK 835 (1049)
Q Consensus 769 ~~~a~~g-l~-~-------Pg~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~-~l~~~lpg~---~vg~t~~~~~~~~ 835 (1049)
.+| +. + .|..-+|.++.|.||+.+.|+.++ .+.+++ .+......- .+-. .|. .+.-
T Consensus 292 ----wGGglLmS~k~R~kl~Giera~SvtwnpHK~~gaplqCs-----a~l~r~~gll~~Cn~~~A~YLFq-~dK-~Ydv 360 (510)
T KOG0629|consen 292 ----WGGGLLMSRKHRHKLTGIERANSVTWNPHKLMGAPLQCS-----AFLTREEGLLQRCNQMSAIYLFQ-QDK-FYDV 360 (510)
T ss_pred ----cccccccChhhHhhccCccccCceeecHHHhhcCcchhh-----HHHHHHHHHHHhhcccchhhhhc-cCc-eeec
Confidence 333 22 2 244568999999999998877664 344443 333222110 0000 000 0000
Q ss_pred CCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc--CCeeeccCCCceee-EEEEeccCc
Q 001586 836 SQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAH-EFIVDLRGL 912 (1049)
Q Consensus 836 ~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~--~~v~~~g~~g~~~~-e~iv~~~~~ 912 (1049)
...|+.-. ...|--.-+-.-|-..+..|-+|+.+...+++++|+|+.++|++- +..++..+. .+.+ .|.+. ++.
T Consensus 361 S~DTgdK~-iQCGRh~D~FKlWlmwkaKG~~Gfe~~v~k~~~lA~yl~~~lrer~~~~~l~~~~p-e~~nv~fw~v-p~~ 437 (510)
T KOG0629|consen 361 SYDTGDKA-IQCGRHVDVFKLWLMWKAKGTQGFEAQVDKCLRLAEYLYDRLREREGFEMLFELEP-EHVNVCFWYV-PPS 437 (510)
T ss_pred ccccccch-hhcCccccHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHhcccceehhcCCC-ceEEEeeccC-chH
Confidence 11111110 112222233456888899999999999999999999999999873 555443321 1222 12221 111
Q ss_pred cc--cCCCC--------HHHHHHHHHHCCcccCCCCCC---CCCEEEEEccC-CCCHHHHHHHHHHHHHH
Q 001586 913 KN--TAGIE--------PEDVAKRLMDYGFHGPTMSWP---VPGTLMIEPTE-SESKEELDRYCDALISI 968 (1049)
Q Consensus 913 ~~--~~g~~--------~~~v~k~L~~~Gi~~~~~~~p---~~~~lri~~t~-~~t~eeid~fv~aL~~i 968 (1049)
-. ..+.+ +..|-.++.++|-.--+ +-| .++.+|+.++. ..+.+|+|-+++.|..+
T Consensus 438 lR~~~~~~e~~~rL~kVaPkIK~~Mm~~Gt~Mi~-YqPl~~~~nffr~v~sn~a~~~ad~dflldEIerl 506 (510)
T KOG0629|consen 438 LRGWQENPERDSRLVKVAPKIKERMMKKGTTMIG-YQPLGDKPNFFRMVISNPALTEADLDFLLDEIERL 506 (510)
T ss_pred hccCcccchhhhHHHhhCcHHHHHHHhccceeeE-ecccccccchhheecccchhhhhhHHHHHHHHHHh
Confidence 00 00000 12345566677643211 112 13555554443 35788999988877654
No 387
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.56 E-value=1e-12 Score=152.64 Aligned_cols=304 Identities=15% Similarity=0.116 Sum_probs=182.3
Q ss_pred HHHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCEEEEEcCCCC-
Q 001586 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK- 712 (1049)
Q Consensus 634 i~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~Vv~V~~d~~- 712 (1049)
..++++++++.+|.+.+ +..++|++|...+++++ +.+++++||++...|......+...|++++.++++++
T Consensus 33 ~~~~e~~la~~~g~~~~-v~~~sgt~aL~~~l~al-------~~~pGd~Viv~~~t~~~~~~~~~~~G~~~v~vd~d~~~ 104 (376)
T TIGR02379 33 SRRCETWLENRTGTKKA-LLTPSCTAALEMAALLL-------DIQPGDEVIMPSYTFVSTANAFVLRGAKIVFVDIRPDT 104 (376)
T ss_pred HHHHHHHHHHHhCCCeE-EEeCCHHHHHHHHHHHc-------CCCCcCEEEECCCCcHHHHHHHHHcCCEEEEEecCCCc
Confidence 45788899999998764 55667766653333322 1236789999987665555556788999999999876
Q ss_pred CCCCHHHHHHHHHhcCCCeEEEEEEcCCccccccccHHHHHHHHHHcCCEEEEecccccccc-CcCCCCccCCcEEEeCC
Q 001586 713 GNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQV-GLTSPGYIGADVCHLNL 791 (1049)
Q Consensus 713 g~iD~~~L~~~i~~~~~~taaV~it~Pn~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~-gl~~Pg~~GaDi~~~s~ 791 (1049)
+.+|+++++++++ ++|++|+.++| +|... |+++|.++|+++|+++++|+|+..+.. .-...|.+ .|+.++|+
T Consensus 105 ~~~d~~~le~~i~---~~tk~Iip~~~--~G~~~-d~~~I~~la~~~~i~vIeDaa~~~g~~~~~~~~g~~-~~~~~fSf 177 (376)
T TIGR02379 105 MNIDETLIESAIT---HRTKAIVPVHY--AGVAC-DMDTIMALANKHQLFVIEDAAQGVMSTYKGRALGSI-GHLGTFSF 177 (376)
T ss_pred CCCCHHHHHHhcC---cCceEEEEeCC--CCCcc-CHHHHHHHHHHCCCEEEEECccccCCccCCcccCCC-CCEEEEeC
Confidence 5899999999997 78999987765 58776 799999999999999999998753221 11122333 38889998
Q ss_pred CcccccCCCCCCCceeEEEEc-ccccccCCC-CccccCCCC-CC---CCC--CCCCCCCCccchhhHHHHHHHHHHHHHH
Q 001586 792 HKTFCIPHGGGGPGMGPIGVK-KHLAPFLPS-HPVVSTGGI-PA---PEK--SQPLGTIAAAPWGSALILPISYTYIAMM 863 (1049)
Q Consensus 792 hK~f~~P~g~GGPg~G~i~~~-~~l~~~lpg-~~vg~t~~~-~~---~~~--~~~t~~i~sa~~g~~~~~~~a~a~l~~l 863 (1049)
|++ +.+..||.| |+++++ +++...+.- +..|...+. .. ... .....+... +...++...+.|..
T Consensus 178 ~~~--K~l~~g~~g-G~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~n~~~----~~~~Aa~g~~qL~~- 249 (376)
T TIGR02379 178 HET--KNYTSGGEG-GALLINDQAFIERAEIIREKGTNRSQFFRGEVDKYTWRDIGSSYLP----SELQAAYLWAQLEQ- 249 (376)
T ss_pred CCC--CcCcccCCc-eEEEECCHHHHHHHHHHHHhCCCCccccccCCCcceeeeecccCCc----cHHHHHHHHHHHHH-
Confidence 874 233344344 566555 444443220 001110000 00 000 000001110 11223333333333
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHhccC--C-eeecc-CC--CceeeEEEEeccCccccCCCCHHHHHHHHHHCCcccCCC
Q 001586 864 GSKGLTEASKIAILNANYMAKRLEKHY--P-ILFRG-VN--GTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTM 937 (1049)
Q Consensus 864 G~eGl~~~~~~~~~~a~yL~~~L~~~~--~-v~~~g-~~--g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~ 937 (1049)
+.+..++..+++++..++|+++. . +..+. +. .+..+.|.+.++. +.+.+++.+.|.++||.+...
T Consensus 250 ----l~~~~~~r~~~~~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-----~~~r~~l~~~L~~~gI~~~~~ 320 (376)
T TIGR02379 250 ----ADRINQDRLATWQLYQDALKPLEEKGIIELPSIPNGCQHNAHMFYIKLKD-----EDDRNELIKYLKEQEIMAVFH 320 (376)
T ss_pred ----hHHHHHHHHHHHHHHHHHhccCCcCCeeeCCCCCCCCeeeeEEEEEEECC-----cCCHHHHHHHHHHCCCCcccc
Confidence 34445555667777788887642 1 11111 11 1233445555531 246789999999999975411
Q ss_pred CC-----C-------------C-----CCEEEEEccCCCCHHHHHHHHHHHHHHH
Q 001586 938 SW-----P-------------V-----PGTLMIEPTESESKEELDRYCDALISIR 969 (1049)
Q Consensus 938 ~~-----p-------------~-----~~~lri~~t~~~t~eeid~fv~aL~~i~ 969 (1049)
.. | . ...+.+-.....|++|+|+.+++|+++.
T Consensus 321 ~~p~~~~~~~~~~~~~~~~~p~~~~~~~~~l~LP~~~~l~~~~~~~i~~~i~~~~ 375 (376)
T TIGR02379 321 YVPLHSSPAGRYFGRFHGEDIYTTKESERLVRLPLYYGLSKEDQARVIQTICDYL 375 (376)
T ss_pred CcCCCcchhHHhhCCCCCCChHHHHHHhceEEccCCCCCCHHHHHHHHHHHHHHh
Confidence 10 1 0 2346666667789999999999998753
No 388
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.56 E-value=1.1e-12 Score=152.85 Aligned_cols=272 Identities=15% Similarity=0.110 Sum_probs=180.6
Q ss_pred HHHHHHHHHHhCCCCcceEeccchHHHHHHHHHHhhhccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc---ch
Q 001586 214 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---KD 290 (1049)
Q Consensus 214 ~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a~~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~~---~~ 290 (1049)
.++++.+|++.|.+ .+.++.+|++++..+++++ . ++||+|++++..|+++...+...+...|+++..++. ++
T Consensus 55 ~~L~~~lA~l~g~~--~~i~~~sg~~Ai~~~l~~l-~--~~GD~Vl~~~~~y~~~~~~~~~~~~~~gi~v~~vd~~d~e~ 129 (386)
T PRK08045 55 DVVQRALAELEGGA--GAVLTNTGMSAIHLVTTVF-L--KPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVDQGDEQA 129 (386)
T ss_pred HHHHHHHHHHhCCC--eEEEECCHHHHHHHHHHHH-c--CCCCEEEEcCCCcHHHHHHHHHHHhhCCeEEEEeCCCCHHH
Confidence 34668999999964 4888899998777666554 2 388999999999999888887766667788887764 44
Q ss_pred hhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCCCC
Q 001586 291 IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGG 367 (1049)
Q Consensus 291 l~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~p~~~GaDivvgs~-k~lg~P~~~GG 367 (1049)
+++ +++++++|++++| |++|.+.|+++|+++||++|++++|+ +..+.+....|.++|+|++++|. |+++++-+
T Consensus 130 l~~~l~~~tklV~l~sP~NPtG~v~di~~I~~ia~~~g~~vivD-eay~~~~~~~pl~~gaDivv~S~tK~l~G~~d--- 205 (386)
T PRK08045 130 LRAALAEKPKLVLVESPSNPLLRVVDIAKICHLAREAGAVSVVD-NTFLSPALQNPLALGADLVLHSCTKYLNGHSD--- 205 (386)
T ss_pred HHHhcccCCeEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEE-CCCCccccCCchhhCCCEEEeecceeccCCCC---
Confidence 555 7788999999998 78999999999999999999999994 44455555677889999999998 76653311
Q ss_pred CceEEEEEc-hhHHhcCCCceeeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcchHHHH
Q 001586 368 PHAAFLATS-QEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTI 446 (1049)
Q Consensus 368 P~~G~l~~~-~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irrekaTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i 446 (1049)
--+|++.++ +++.+++ ++-+-...+|. .++ ..|+...|-+-|...
T Consensus 206 ~~~G~vi~~~~~~~~~l----------------------------~~~~~~~g~~~-~p~-----~~~l~~rgl~tl~~R 251 (386)
T PRK08045 206 VVAGVVIAKDPDVVTEL----------------------------AWWANNIGVTG-GAF-----DSYLLLRGLRTLVPR 251 (386)
T ss_pred ceeEEEEeCcHHHHHHH----------------------------HHHHHhcCCCC-CHH-----HHHHHHhhhccHHHH
Confidence 114566553 4443322 00000011111 111 113445555556777
Q ss_pred HHHHHHHHHHHHHHhhcCCCeE-Ec-CC----C-----------CcceEEEecCC----HHHHHHHHHHc--CCeee---
Q 001586 447 AQRVHGLAGTFALGLKKLGTVE-VQ-GL----P-----------FFDTVKVKCAD----AHAIASAAYKI--EMNLR--- 500 (1049)
Q Consensus 447 a~~~~~~a~~l~~~L~~~g~~~-v~-~~----~-----------~~~~v~i~~~~----~~~v~~~L~~~--gI~~~--- 500 (1049)
.++..+++..+++.|++.+.++ |. .. | +..-|+|.+++ +.++.+.|.-. +..++
T Consensus 252 ~~~~~~na~~la~~L~~~p~v~~V~yp~l~~~p~~~~~~~~~~g~g~~~s~~~~~~~~~~~~f~~~l~~~~~~~s~G~~~ 331 (386)
T PRK08045 252 MELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDGDEQTLRRFLGGLSLFTLAESLGGVE 331 (386)
T ss_pred HHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEecCcHHHHHHHHHhccceeEeccCCCCc
Confidence 7888999999999999875453 32 11 1 11246677654 23455554421 21110
Q ss_pred ------------e----------ecCCeEEEEeccCCCHHHHHHHHHHHh
Q 001586 501 ------------V----------VDSNTVTASFDETTTLEDVDKLFIVFA 528 (1049)
Q Consensus 501 ------------~----------~~~~~vris~~~~~t~edid~lv~aL~ 528 (1049)
. +.++.||+|++.-+.++=|+.|.++|.
T Consensus 332 sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~al~ 381 (386)
T PRK08045 332 SLISHAATMTHAGMAPEARAAAGISETLLRISTGIEDGEDLIADLENGFR 381 (386)
T ss_pred eeEeCCCCcccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHHH
Confidence 0 124689999998776666677777775
No 389
>PRK09148 aminotransferase; Validated
Probab=99.56 E-value=1.1e-12 Score=154.32 Aligned_cols=307 Identities=13% Similarity=0.081 Sum_probs=181.3
Q ss_pred hcHHHHHHHHHHHHHHhhCCC--cc-ccccCchHH-HHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCE
Q 001586 628 QGYQEMFNNLGEWLCTITGFD--SF-SLQPNAGAA-GEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMK 703 (1049)
Q Consensus 628 ~G~~~~i~el~~~la~l~G~~--~~-~l~~~sGa~-ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~ 703 (1049)
+|..++...+.+++.+.+|.+ .. .+..++|++ |.. .+++.+. .+++.|+++...+..+...+...|++
T Consensus 68 ~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~al~---~~~~~l~-----~~gd~Vl~~~P~y~~~~~~~~~~g~~ 139 (405)
T PRK09148 68 KGIPGLRRAQAAYYARRFGVKLNPDTQVVATLGSKEGFA---NMAQAIT-----APGDVILCPNPSYPIHAFGFIMAGGV 139 (405)
T ss_pred CCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHH---HHHHHhc-----CCCCEEEEcCCCCcccHHHHHhcCCE
Confidence 566666767777777666753 33 455555554 332 3333331 25688999988776666677889999
Q ss_pred EEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-ccccccc--cHHHHHHHHHHcCCEEEEecccccc-ccC--cC
Q 001586 704 IVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEE--GIDEICKIIHDNGGQVYMDGANMNA-QVG--LT 777 (1049)
Q Consensus 704 Vv~V~~d~~g~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~~--di~eI~~lah~~G~ll~vD~A~~~a-~~g--l~ 777 (1049)
++.++.+.++. ++++++++++++.+++++|++++|+ .+|.+-+ .+++|.++|+++|+++++|.++..- ..+ ..
T Consensus 140 v~~v~~~~~~~-~~~~l~~~~~~~~~~~~~v~l~~P~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~ 218 (405)
T PRK09148 140 IRSVPAEPDEE-FFPALERAVRHSIPKPIALIVNYPSNPTAYVADLDFYKDVVAFAKKHDIIILSDLAYSEIYFDGNPPP 218 (405)
T ss_pred EEEEeCCCCCC-CccCHHHHHhhccccceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEeccchhhhcCCCCCC
Confidence 99999876542 4566777776555789999999995 6998752 3678999999999999999986421 111 11
Q ss_pred CCC----ccCCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHH
Q 001586 778 SPG----YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALIL 853 (1049)
Q Consensus 778 ~Pg----~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~ 853 (1049)
+.. ..+..+++.++.|.|++| |.++|++++++++...+.. . + ...+.+.+...+.
T Consensus 219 s~~~~~~~~~~~i~~~SfSK~~~~p----GlR~G~~v~~~~~i~~l~~-~-----------~--~~~~~~~~~~~q~--- 277 (405)
T PRK09148 219 SVLQVPGAKDVTVEFTSMSKTFSMA----GWRMGFAVGNERLIAALTR-V-----------K--SYLDYGAFTPIQV--- 277 (405)
T ss_pred ChhhCCCccCcEEEEeccccccCCc----chheeeeeCCHHHHHHHHH-H-----------H--HHhccCCChHHHH---
Confidence 111 112235578889988655 6779999988766554320 0 0 0001111111111
Q ss_pred HHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHH-HCCc
Q 001586 854 PISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-DYGF 932 (1049)
Q Consensus 854 ~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~-~~Gi 932 (1049)
++...+. -+.+-+++..+...++.+++.+.|++. .+.+..+.+..+ +.++++... .+.+..++++.|. ++|+
T Consensus 278 -~~~~~L~-~~~~~~~~~~~~~~~~r~~l~~~L~~~-~~~~~~p~~g~f--~~~~l~~~~--~~~~~~~~~~~ll~~~gV 350 (405)
T PRK09148 278 -AATAALN-GPQDCIAEMRELYKKRRDVLVESFGRA-GWDIPPPAASMF--AWAPIPEAF--RHLGSLEFSKLLVEKADV 350 (405)
T ss_pred -HHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHHHHc-CCccCCCCeeEE--EEEECCCcc--CCCCHHHHHHHHHHhCCE
Confidence 1222222 122234444555667788888888874 222212222222 445554210 0124567888765 6899
Q ss_pred ccC-CCCCCC--CCEEEEEccCCCCHHHHHHHHHHHHHHHHHHH
Q 001586 933 HGP-TMSWPV--PGTLMIEPTESESKEELDRYCDALISIREEIA 973 (1049)
Q Consensus 933 ~~~-~~~~p~--~~~lri~~t~~~t~eeid~fv~aL~~i~~~i~ 973 (1049)
.+. .-.|+. .+++||++. .+.++++..++.|.++++...
T Consensus 351 ~v~pg~~f~~~~~~~~Ri~~~--~~~~~l~~al~~l~~~l~~~~ 392 (405)
T PRK09148 351 AVAPGVGFGEHGDGYVRIALV--ENEQRIRQAARNIKRFLSSAD 392 (405)
T ss_pred EEeCchhhCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHHH
Confidence 864 323432 478999986 356666666666666655433
No 390
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.56 E-value=1.9e-13 Score=159.93 Aligned_cols=285 Identities=18% Similarity=0.143 Sum_probs=181.7
Q ss_pred HHHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCcc-HH---HHHhcCCEEEEEcC
Q 001586 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTN-PA---TAAMCGMKIVSVGT 709 (1049)
Q Consensus 634 i~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~-pa---~a~~~G~~Vv~V~~ 709 (1049)
..++++.++++.|.+. .+..++|..+..+++.++. .++++||++...|+.. .. .+...|++++.++.
T Consensus 72 ~~~le~~lA~l~g~~~-al~~~sG~~Ai~~~l~all--------~~Gd~Vl~~~~~~~~t~~~~~~~~~~~G~~v~~vd~ 142 (403)
T PRK07810 72 VSMFEERLRLIEGAEA-CFATASGMSAVFTALGALL--------GAGDRLVAARSLFGSCFVVCNEILPRWGVETVFVDG 142 (403)
T ss_pred HHHHHHHHHHHhCCCc-EEEECChHHHHHHHHHHHh--------CCCCEEEEccCCcchHHHHHHHHHHHcCcEEEEECC
Confidence 4578899999999875 4667788777655444331 2578999988766443 22 25568999999986
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-ccccccccHHHHHHHHHHcCCEEEEeccccccccCcCCCCccCCcEEE
Q 001586 710 DAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1049)
Q Consensus 710 d~~g~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~Pg~~GaDi~~ 788 (1049)
.|+++++++++ ++|++|++++|+ .+|.+. |+++|+++||++|++|+||+++. .+....|.+.|+|+++
T Consensus 143 -----~d~~~l~~ai~---~~tklV~~esp~Nptg~v~-dl~~I~~la~~~g~~vivD~a~a--~~~~~~~~~~gaDivv 211 (403)
T PRK07810 143 -----EDLSQWEEALS---VPTQAVFFETPSNPMQSLV-DIAAVSELAHAAGAKVVLDNVFA--TPLLQRGLPLGADVVV 211 (403)
T ss_pred -----CCHHHHHHhcC---cCceEEEEECCCCCCCeec-CHHHHHHHHHHcCCEEEEECCCC--ccccCChhhcCCcEEE
Confidence 48999999997 789999999995 689887 89999999999999999999864 2233456678999999
Q ss_pred eCCCcccccCCCCCCCceeEEEEcccccc-cCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhh
Q 001586 789 LNLHKTFCIPHGGGGPGMGPIGVKKHLAP-FLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (1049)
Q Consensus 789 ~s~hK~f~~P~g~GGPg~G~i~~~~~l~~-~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eG 867 (1049)
.|++|+|+. .|..-+|++++++.... .+.. .. + ..+...+ + ..+| +...|-+-
T Consensus 212 ~S~tK~l~g---~g~~~gG~v~~~~~~~~~~l~~-~~----------~--~~g~~~s-~-------~~a~--l~l~~L~t 265 (403)
T PRK07810 212 YSGTKHIDG---QGRVLGGAILGDREYIDGPVQK-LM----------R--HTGPALS-A-------FNAW--VLLKGLET 265 (403)
T ss_pred ccCCceecC---CcCceeEEEEeChHHHHHHHHH-HH----------H--HhCCCCC-H-------HHHH--HHHhccCc
Confidence 999999851 11112588887765332 1100 00 0 0111111 1 1123 34455666
Q ss_pred HHHHHHHHHHHHHHHHHHHhccC---CeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHHHCCcccCCCCCCCCCE
Q 001586 868 LTEASKIAILNANYMAKRLEKHY---PILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGT 944 (1049)
Q Consensus 868 l~~~~~~~~~~a~yL~~~L~~~~---~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~p~~~~ 944 (1049)
+..+.++..+++..+++.|+++. .|.|+|.. ..+..+++++.. .|. ++.
T Consensus 266 l~~R~~~~~~~a~~~a~~L~~~p~v~~V~yP~l~------------------~~p~~~~~~~~~-~g~---------g~~ 317 (403)
T PRK07810 266 LALRVRHSNASALRIAEFLEGHPAVRWVRYPFLP------------------SHPQYDLAKRQM-SGG---------GTV 317 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCccEEECCCCC------------------CCccHHHHHhhC-CCC---------ceE
Confidence 77788888899999999998763 23443310 123356666643 221 122
Q ss_pred EEEEccCCC--CHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCccccccchh
Q 001586 945 LMIEPTESE--SKEELDRYCDALISIREEIAQIENGKADIHNNVLKVTCLFLHHGYF 999 (1049)
Q Consensus 945 lri~~t~~~--t~eeid~fv~aL~~i~~~i~~i~~g~~~~~~~~l~~~ph~~~~~~~ 999 (1049)
+-+.+.... +.++..+|++.|+-+. ...++ | +...|...|-+++++++
T Consensus 318 ~s~~l~~~~~~~~~~~~~f~~~l~l~~-~~~sl--G----~~~sl~~~p~~~~h~~~ 367 (403)
T PRK07810 318 VTFELDAPEDAAKKRAFEVLDKLRVID-ISNNL--G----DAKSLITHPATTTHRAM 367 (403)
T ss_pred EEEEEcCCCCcCHHHHHHHHHhCCceE-EeccC--C----CCcceeeCCCccccccC
Confidence 333332110 4677888988886332 11122 2 45666666666666443
No 391
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=99.56 E-value=1.5e-13 Score=158.69 Aligned_cols=290 Identities=19% Similarity=0.213 Sum_probs=180.7
Q ss_pred HHHHHHHHhhC------CCcc-ccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCEEEEEc
Q 001586 636 NLGEWLCTITG------FDSF-SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVG 708 (1049)
Q Consensus 636 el~~~la~l~G------~~~~-~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~Vv~V~ 708 (1049)
++++.+++.++ .+.. .+..++|++.....+..+. . ..+++.|+++...|......++..|.+++.++
T Consensus 48 ~lr~~ia~~~~~~~~~~~~~~~~i~~~~G~~~~~~~~~~~~---~---~~~~~~vlv~~P~y~~~~~~~~~~g~~~~~~~ 121 (363)
T PF00155_consen 48 ELREAIADFLGRRYGVPVDPEANILVTSGAQAALFLLLRLL---K---INPGDTVLVPDPCYPSYIEAARLLGAEVIPVP 121 (363)
T ss_dssp HHHHHHHHHHHHHHTHHTTGGEGEEEESHHHHHHHHHHHHH---H---SSTTSEEEEEESSSTHHHHHHHHTTSEEEEEE
T ss_pred HHHHHHHHHhhhccCcccccceEEEEecccccchhhhhhcc---c---ccccccceecCCccccccccccccCceeeecc
Confidence 44555555555 4444 6777777764422222221 1 12467899999888777788899999999999
Q ss_pred CC--CCCCCCHHHHHHHHHhcC-C--CeEEEEEEcCC-cccccc--ccHHHHHHHHHHcCCEEEEeccccccccCcCC--
Q 001586 709 TD--AKGNINIEELRKAAEANR-D--NLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQVGLTS-- 778 (1049)
Q Consensus 709 ~d--~~g~iD~~~L~~~i~~~~-~--~taaV~it~Pn-~~G~i~--~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~-- 778 (1049)
++ .++.+|+++|++.++++. + ++.+|++++|+ .+|..- +++++|+++|+++|+++++|.++..-..+-..
T Consensus 122 ~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~ 201 (363)
T PF00155_consen 122 LDSENDFHLDPEALEEALDELPSKGPRPKAVLICNPNNPTGSVLSLEELRELAELAREYNIIIIVDEAYSDLIFGDPDFG 201 (363)
T ss_dssp EEETTTTEETHHHHHHHHHTSHTTTETEEEEEEESSBTTTTBB--HHHHHHHHHHHHHTTSEEEEEETTTTGBSSSSHTH
T ss_pred ccccccccccccccccccccccccccccceeeecccccccccccccccccchhhhhcccccceeeeeceeccccCCCccC
Confidence 64 567899999999998531 1 56899999995 589663 35777778899999999999986421111000
Q ss_pred ---C-CccCCc-EEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHH
Q 001586 779 ---P-GYIGAD-VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALIL 853 (1049)
Q Consensus 779 ---P-g~~GaD-i~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~ 853 (1049)
. .+.+.+ +++.|+.|.|+.| |.++|++++++.+.+.+.... . ....++ ..+
T Consensus 202 ~~~~~~~~~~~vi~~~S~SK~~g~~----GlRvG~i~~~~~~~~~l~~~~-----------~---~~~~~~--~~~---- 257 (363)
T PF00155_consen 202 PIRSLLDEDDNVIVVGSLSKSFGLP----GLRVGYIVAPPELIERLRRFQ-----------R---SGLSSS--PMQ---- 257 (363)
T ss_dssp HHHGHHTTTSTEEEEEESTTTTTSG----GGTEEEEEEEHHHHHHHHHHH-----------H---HTTSSH--HHH----
T ss_pred cccccccccccceeeeecccccccc----ccccccccchhhhhhhhhhcc-----------c---cccccc--hhh----
Confidence 0 012334 7777888888544 667899999876665432100 0 011111 111
Q ss_pred HHHHHHHHHHch--hhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHHHC-
Q 001586 854 PISYTYIAMMGS--KGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDY- 930 (1049)
Q Consensus 854 ~~a~a~l~~lG~--eGl~~~~~~~~~~a~yL~~~L~~~~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~- 930 (1049)
.++...+..-+. +-+.+..+....+.+++.+.|++. .+.+.++++..+ +++..+. .+..++.++|.++
T Consensus 258 ~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-~~~~~~~~~~~~--~~~~~~~------~~~~~l~~~L~~~~ 328 (363)
T PF00155_consen 258 AAAAAALSDPELVEKWLEELRERLRENRDLLREALEEI-GITVLPPEAGFF--LWVRLDP------NDAEELAQELLEEY 328 (363)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TSEEEHHSBSSE--EEEEESH------HHHHHHHHHHHHHH
T ss_pred HHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHh-hhheeeccCccE--EEEEccc------chHHHHHHHHHHhC
Confidence 112222222221 134455666777889999999875 322222222222 3334321 1457899999987
Q ss_pred CcccCC-CCCCCCCEEEEEccCCCCHHHHHHHHHHH
Q 001586 931 GFHGPT-MSWPVPGTLMIEPTESESKEELDRYCDAL 965 (1049)
Q Consensus 931 Gi~~~~-~~~p~~~~lri~~t~~~t~eeid~fv~aL 965 (1049)
||.+.. ..|..++.+|+++ -..+++++++++++|
T Consensus 329 gi~v~pg~~~~~~~~iRi~~-a~~~~e~~~~~~~~l 363 (363)
T PF00155_consen 329 GILVRPGSYFGVPGYIRISL-ASHSEEDLEEALERL 363 (363)
T ss_dssp TEEEEEGGGGTSTTEEEEEG-GCSCHHHHHHHHHHH
T ss_pred CEEEEecCCCCCCCEEEEEe-ccCCHHHHHHHHhhC
Confidence 998643 2333478999999 668899999999876
No 392
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.56 E-value=3.7e-13 Score=156.46 Aligned_cols=209 Identities=19% Similarity=0.193 Sum_probs=144.0
Q ss_pred HHHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHH----HHHhcCCEEEEEcC
Q 001586 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA----TAAMCGMKIVSVGT 709 (1049)
Q Consensus 634 i~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa----~a~~~G~~Vv~V~~ 709 (1049)
..++++.++++.|.+.. +..+||+.|..+++ +. . .++++||++...++.... .+...|++++.++.
T Consensus 52 ~~~Le~~la~l~g~~~a-l~~~SG~~Al~~~l-~~--l------~pGd~Vi~~~~~y~~t~~~~~~~~~~~gi~v~~vd~ 121 (380)
T PRK06176 52 RFALEELIADLEGGVKG-FAFASGLAGIHAVF-SL--F------QSGDHVLLGDDVYGGTFRLFDKVLVKNGLSCTIIDT 121 (380)
T ss_pred HHHHHHHHHHHhCCCCE-EEECCHHHHHHHHH-HH--c------CCCCEEEEcCCChhHHHHHHHHHHHhcCeEEEEcCC
Confidence 45788999999998765 55677876664322 21 1 256889998765543221 24567999988876
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-ccccccccHHHHHHHHHHcCCEEEEeccccccccCcCCCCccCCcEEE
Q 001586 710 DAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1049)
Q Consensus 710 d~~g~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~Pg~~GaDi~~ 788 (1049)
.|+++++++++ ++|++|++++|+ .+|.+. |+++|+++||++|+++++|+++.. ..+..|.++|+|+++
T Consensus 122 -----~d~e~l~~ai~---~~t~lV~lesP~Nptg~~~-di~~I~~la~~~gi~vivD~t~a~--~~~~~p~~~gaDivv 190 (380)
T PRK06176 122 -----SDLSQIKKAIK---PNTKALYLETPSNPLLKIT-DLAQCASVAKDHGLLTIVDNTFAT--PYYQNPLLLGADIVV 190 (380)
T ss_pred -----CCHHHHHHhcC---cCceEEEEECCCCCCceec-CHHHHHHHHHHcCCEEEEECCccc--cccCCccccCCCEEE
Confidence 48999999997 789999999995 689887 899999999999999999988642 234567788999999
Q ss_pred eCCCcccccCCCCCCCceeEEEEcc-cccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhh
Q 001586 789 LNLHKTFCIPHGGGGPGMGPIGVKK-HLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (1049)
Q Consensus 789 ~s~hK~f~~P~g~GGPg~G~i~~~~-~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eG 867 (1049)
+|++|+++.| |....|++++++ ++...+.. . + +..+...+ + .-+|+...|-+.
T Consensus 191 ~S~tK~l~g~---~d~~gG~vv~~~~~~~~~~~~--~----------~-~~~G~~~~-~---------~~~~l~~~gl~t 244 (380)
T PRK06176 191 HSGTKYLGGH---SDVVAGLVTTNNEALAQEIAF--F----------Q-NAIGGVLG-P---------QDSWLLQRGIKT 244 (380)
T ss_pred ecCceeccCC---ccceeeEEEecHHHHHHHHHH--H----------H-HHhcCCCC-H---------HHHHHHHhccCc
Confidence 9999998421 112367777754 33332210 0 0 00111111 1 112344556677
Q ss_pred HHHHHHHHHHHHHHHHHHHhcc
Q 001586 868 LTEASKIAILNANYMAKRLEKH 889 (1049)
Q Consensus 868 l~~~~~~~~~~a~yL~~~L~~~ 889 (1049)
+..+.++..+++..+++.|+++
T Consensus 245 l~~R~~~~~~~a~~la~~L~~~ 266 (380)
T PRK06176 245 LGLRMEAHQKNALCVAEFLEKH 266 (380)
T ss_pred HHHHHHHHHHHHHHHHHHHHhC
Confidence 7778888888999999999875
No 393
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=99.56 E-value=1.5e-12 Score=152.63 Aligned_cols=297 Identities=14% Similarity=0.138 Sum_probs=179.1
Q ss_pred hcHHHHHHHHHHHHHHhhCCC---cc-ccccCchHH-HHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCC
Q 001586 628 QGYQEMFNNLGEWLCTITGFD---SF-SLQPNAGAA-GEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGM 702 (1049)
Q Consensus 628 ~G~~~~i~el~~~la~l~G~~---~~-~l~~~sGa~-ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~ 702 (1049)
+|..++.+.+.+++.+.+|.+ .. .+..++|++ |.+. +++.+. .+| +.+++|+++......+...+.+.|+
T Consensus 65 ~G~~~lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~---~~~~l~-~~~-~~gd~vlv~~P~y~~~~~~~~~~g~ 139 (396)
T PRK09147 65 AGLPALREAIAAWLERRYGLPALDPATQVLPVNGSREALFA---FAQTVI-DRD-GPGPLVVCPNPFYQIYEGAALLAGA 139 (396)
T ss_pred CCCHHHHHHHHHHHHHHhCCCcCCccceEEECCChHHHHHH---HHHHHc-CCC-CCCCEEEEcCCCccchHHHHHhcCC
Confidence 466666667777777777854 32 455545544 4432 333322 110 1267899998766666666888999
Q ss_pred EEEEEcCCCC--CCCCHHHHHHHHHhcCCCeEEEEEEcCC-cccccc--ccHHHHHHHHHHcCCEEEEecccccc-ccCc
Q 001586 703 KIVSVGTDAK--GNINIEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMNA-QVGL 776 (1049)
Q Consensus 703 ~Vv~V~~d~~--g~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~--~di~eI~~lah~~G~ll~vD~A~~~a-~~gl 776 (1049)
+++.||++++ ..+|+++|++++. +++++|++++|+ .+|.+- +.+++|+++|+++++++++|.++..- ..+-
T Consensus 140 ~~~~vp~~~~~~~~~d~~~l~~~~~---~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~ 216 (396)
T PRK09147 140 EPYFLNCDPANNFAPDFDAVPAEVW---ARTQLLFVCSPGNPTGAVLPLDDWKKLFALSDRYGFVIASDECYSEIYFDEA 216 (396)
T ss_pred EEEEeccCccccCccCHHHHHHHHh---hccEEEEEcCCCCCcCccCCHHHHHHHHHHHHHcCeEEEeeccccccccCCC
Confidence 9999999754 4799999998886 688999999994 699774 35899999999999999999986421 1110
Q ss_pred -CCCC------ccCCc-----EEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCc
Q 001586 777 -TSPG------YIGAD-----VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAA 844 (1049)
Q Consensus 777 -~~Pg------~~GaD-----i~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~s 844 (1049)
..+. ..+.| +++.|+.|.|++| |.++|++++++++...+-.. ......+++
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~----GlRiG~~~~~~~l~~~~~~~------------~~~~~~~~~- 279 (396)
T PRK09147 217 APPLGLLEAAAELGRDDFKRLVVFHSLSKRSNVP----GLRSGFVAGDAALLKKFLLY------------RTYHGCAMP- 279 (396)
T ss_pred CCCchhhhhccccCccccccEEEEeccccccCCc----cceeeeecCCHHHHHHHHHH------------hhhcccCCC-
Confidence 0110 12222 6777888877544 67899999887765543100 000001111
Q ss_pred cchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeEEEEeccCccccCCCCHHHHH
Q 001586 845 APWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVA 924 (1049)
Q Consensus 845 a~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~ 924 (1049)
...+.. +..+| ...+-+++..+...++.+.+.+.|++++.+.. +.+.. -+.++++ .+..+++
T Consensus 280 -~~~q~a-~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~--p~~g~--f~~~~~~-------~~~~~~~ 341 (396)
T PRK09147 280 -PAVQAA-SIAAW-----NDEAHVRENRALYREKFDAVTPILAPVLDVQL--PDAGF--YLWAKVP-------GDDTEFA 341 (396)
T ss_pred -HHHHHH-HHHHh-----cchhHHHHHHHHHHHHHHHHHHHHHHhcCCCC--CCeeE--EEEEECC-------CCHHHHH
Confidence 111211 11112 11223444455556667778888877543321 22222 2456654 2456788
Q ss_pred HHHH-HCCcccC-CCCC--------CCCCEEEEEccCCCCHHHHHHHHHHHHHHH
Q 001586 925 KRLM-DYGFHGP-TMSW--------PVPGTLMIEPTESESKEELDRYCDALISIR 969 (1049)
Q Consensus 925 k~L~-~~Gi~~~-~~~~--------p~~~~lri~~t~~~t~eeid~fv~aL~~i~ 969 (1049)
++|. ++|+.+. .-.| +..+++||++.. +.++++..++.|++++
T Consensus 342 ~~ll~~~gv~v~pg~~f~~~~~~~~~~~~~iRi~~~~--~~~~l~~~l~rl~~~~ 394 (396)
T PRK09147 342 RRLYADYNVTVLPGSYLAREAHGVNPGAGRVRIALVA--PLAECVEAAERIVDFC 394 (396)
T ss_pred HHHHHhCCEEEeCCccccccccCCCCCCCeEEEEecC--CHHHHHHHHHHHHHHh
Confidence 8875 6798753 2222 124789999874 4677888777776654
No 394
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.55 E-value=1.6e-13 Score=159.87 Aligned_cols=207 Identities=18% Similarity=0.232 Sum_probs=141.9
Q ss_pred HHHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHH----HHhcCCEEEEEcC
Q 001586 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGT 709 (1049)
Q Consensus 634 i~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~----a~~~G~~Vv~V~~ 709 (1049)
..++++.++++.|.+. .+..++|.++...++.+. . .++++|+++...|+..... +...|++++.++.
T Consensus 54 ~~~L~~~lA~l~g~~~-~i~~~sg~~Ai~~~l~~l---~-----~~GD~Vl~~~~~y~~~~~~~~~~~~~~gi~v~~vd~ 124 (386)
T PRK08045 54 RDVVQRALAELEGGAG-AVLTNTGMSAIHLVTTVF---L-----KPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVDQ 124 (386)
T ss_pred HHHHHHHHHHHhCCCe-EEEECCHHHHHHHHHHHH---c-----CCCCEEEEcCCCcHHHHHHHHHHHhhCCeEEEEeCC
Confidence 3478899999999654 455666766554333322 1 2578899988766543322 2234567777652
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-ccccccccHHHHHHHHHHcCCEEEEeccccccccCcCCCCccCCcEEE
Q 001586 710 DAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1049)
Q Consensus 710 d~~g~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~Pg~~GaDi~~ 788 (1049)
.|+++++++++ +++++|++++|+ .+|.+. |+++|+++||++|++++||+++... ....|-++|+|+++
T Consensus 125 -----~d~e~l~~~l~---~~tklV~l~sP~NPtG~v~-di~~I~~ia~~~g~~vivDeay~~~--~~~~pl~~gaDivv 193 (386)
T PRK08045 125 -----GDEQALRAALA---EKPKLVLVESPSNPLLRVV-DIAKICHLAREAGAVSVVDNTFLSP--ALQNPLALGADLVL 193 (386)
T ss_pred -----CCHHHHHHhcc---cCCeEEEEECCCCCCCEec-CHHHHHHHHHHcCCEEEEECCCCcc--ccCCchhhCCCEEE
Confidence 68999999997 789999999995 589887 7999999999999999999986432 23567788999999
Q ss_pred eCCCcccccCCCCCCCc---eeEEEEc-ccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHc
Q 001586 789 LNLHKTFCIPHGGGGPG---MGPIGVK-KHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMG 864 (1049)
Q Consensus 789 ~s~hK~f~~P~g~GGPg---~G~i~~~-~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG 864 (1049)
.|+||+++ |++ .|+++++ +++.+.+. .. + ..+ +.+.+++ -+|+...|
T Consensus 194 ~S~tK~l~------G~~d~~~G~vi~~~~~~~~~l~-----~~-------~-~~~-g~~~~p~---------~~~l~~rg 244 (386)
T PRK08045 194 HSCTKYLN------GHSDVVAGVVIAKDPDVVTELA-----WW-------A-NNI-GVTGGAF---------DSYLLLRG 244 (386)
T ss_pred eecceecc------CCCCceeEEEEeCcHHHHHHHH-----HH-------H-Hhc-CCCCCHH---------HHHHHHhh
Confidence 99999985 333 5777664 44433221 00 0 001 1121111 23445555
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhcc
Q 001586 865 SKGLTEASKIAILNANYMAKRLEKH 889 (1049)
Q Consensus 865 ~eGl~~~~~~~~~~a~yL~~~L~~~ 889 (1049)
-+-+..+.++..+++..+++.|+++
T Consensus 245 l~tl~~R~~~~~~na~~la~~L~~~ 269 (386)
T PRK08045 245 LRTLVPRMELAQRNAQAIVKYLQTQ 269 (386)
T ss_pred hccHHHHHHHHHHHHHHHHHHHHcC
Confidence 5668888899999999999999986
No 395
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.55 E-value=1.6e-12 Score=150.60 Aligned_cols=265 Identities=15% Similarity=0.095 Sum_probs=175.1
Q ss_pred HHHHHHHHHHhCCCCcceEeccchHHHHHHHHHHhhhccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc-----
Q 001586 214 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL----- 288 (1049)
Q Consensus 214 ~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a~~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~~----- 288 (1049)
.++++.+|+++|.++.++.+++|++.+...+..++ . ++|++|++++..|+.+...+ +..|++++.++.
T Consensus 70 ~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~~~l-~--~~gd~vl~~~p~y~~~~~~~----~~~g~~~~~~~~~~~~~ 142 (367)
T PRK02731 70 FELKAALAEKFGVDPERIILGNGSDEILELLARAY-L--GPGDEVIYSEHGFAVYPIAA----QAVGAKPVEVPAKDYGH 142 (367)
T ss_pred HHHHHHHHHHhCcCHHHEEEcCCHHHHHHHHHHHh-c--CCCCEEEEecCCHHHHHHHH----HHcCCeEEEecccCCCC
Confidence 46778999999998889989988887665544443 2 27899999998887665543 346888888765
Q ss_pred --chhhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhC--CcEEEEEeccccccCCC---CC----Ccccce-EEEe
Q 001586 289 --KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHAN--GVKVVMATDLLALTILK---PP----GELGAD-IVVG 354 (1049)
Q Consensus 289 --~~l~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~--galliV~a~~~alg~l~---~p----~~~GaD-ivvg 354 (1049)
+++++ +++++++|++.+| |++|.+.|.++|.++++.. |++++++. ........ .+ .+..-+ |+++
T Consensus 143 ~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De-~y~~~~~~~~~~~~~~~~~~~~~~i~~~ 221 (367)
T PRK02731 143 DLDAMLAAVTPRTRLVFIANPNNPTGTYLPAEEVERFLAGVPPDVLVVLDE-AYAEYVRRKDYEDGLELVAKFPNVVVTR 221 (367)
T ss_pred CHHHHHHHhCCCCcEEEEeCCCCCCCcCCCHHHHHHHHHhCCCCcEEEEEC-cHHHhccCcCcccHHHHHhhcCCEEEEe
Confidence 33444 6778999999998 7999999999999999875 88988843 22111110 00 011223 4555
Q ss_pred cC-ccccccCCCCCCceEEEEEchhHHhcCCCceeeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHH
Q 001586 355 SA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAM 433 (1049)
Q Consensus 355 s~-k~lg~P~~~GGP~~G~l~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irrekaTsni~t~~~l~a~~aa~ 433 (1049)
|. |.||. +|...||+++++++.+.+.. -+.+.++++ . +..++.
T Consensus 222 S~SK~~g~----~G~RiG~l~~~~~~~~~l~~----------------------------~~~~~~~~~--~--~~~~a~ 265 (367)
T PRK02731 222 TFSKAYGL----AGLRVGYGIAPPEIIDALNR----------------------------VRQPFNVNS--L--ALAAAV 265 (367)
T ss_pred eehHhhcC----cccceeeeeCCHHHHHHHHH----------------------------ccCCCCCCH--H--HHHHHH
Confidence 54 76653 24457999998887765410 001112221 1 112222
Q ss_pred HHHHhC-cchHHHHHHHHHHHHHHHHHHhhcCCCeEEcCCCCcceEEEecCC---HHHHHHHHHHcCCeeeeec----CC
Q 001586 434 YAVYHG-PEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD---AHAIASAAYKIEMNLRVVD----SN 505 (1049)
Q Consensus 434 y~~~~g-~~Gl~~ia~~~~~~a~~l~~~L~~~g~~~v~~~~~~~~v~i~~~~---~~~v~~~L~~~gI~~~~~~----~~ 505 (1049)
.++. .+-++++.++..++.+++.+.|++.| +.+... ...-+.+.++. +.++.++|.++||.++... ++
T Consensus 266 --~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~-~g~~~~i~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~ 341 (367)
T PRK02731 266 --AALDDDAFVEKSRALNAEGMAWLTEFLAELG-LEYIPS-VGNFILVDFDDGKDAAEAYQALLKRGVIVRPVAGYGLPN 341 (367)
T ss_pred --HHhCCHHHHHHHHHHHHHHHHHHHHHHHHCC-CccCCC-CceEEEEECCCCCCHHHHHHHHHHCCEEEEeCCCCCCCC
Confidence 2222 23357777777888889999998886 766531 12224455532 7889999999999886542 46
Q ss_pred eEEEEeccCCCHHHHHHHHHHHhC
Q 001586 506 TVTASFDETTTLEDVDKLFIVFAG 529 (1049)
Q Consensus 506 ~vris~~~~~t~edid~lv~aL~~ 529 (1049)
.+|+|++ +.+|+++|+++|+.
T Consensus 342 ~iRis~~---~~~e~~~l~~aL~~ 362 (367)
T PRK02731 342 ALRITIG---TEEENRRFLAALKE 362 (367)
T ss_pred eEEEecC---CHHHHHHHHHHHHH
Confidence 8999985 78999999999963
No 396
>PRK08068 transaminase; Reviewed
Probab=99.55 E-value=1.4e-12 Score=152.57 Aligned_cols=293 Identities=12% Similarity=0.089 Sum_probs=175.7
Q ss_pred hcHHHHHHHHHHHHHHhhCC--Ccc-ccccCch-HHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCE
Q 001586 628 QGYQEMFNNLGEWLCTITGF--DSF-SLQPNAG-AAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMK 703 (1049)
Q Consensus 628 ~G~~~~i~el~~~la~l~G~--~~~-~l~~~sG-a~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~ 703 (1049)
+|..++...+.+++.+..|. +.. .+...+| .++.+. +++.+. .++++|+++...++.+...+++.|++
T Consensus 70 ~g~~~lr~aia~~~~~~~g~~~~~~~~i~it~G~~~~l~~---~~~~~~-----~~gd~vlv~~P~y~~~~~~~~~~g~~ 141 (389)
T PRK08068 70 RGYPFLKEAAADFYKREYGVTLDPETEVAILFGGKAGLVE---LPQCLM-----NPGDTILVPDPGYPDYLSGVALARAQ 141 (389)
T ss_pred CCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHHHHHH---HHHHhC-----CCCCEEEEcCCCCcchHHHHHhcCCE
Confidence 46666666666666555574 333 3434444 444432 233321 25688999988777777778899999
Q ss_pred EEEEcCCCC--CCCCHHHHHHHHHhcCCCeEEEEEEcCC-cccccc--ccHHHHHHHHHHcCCEEEEeccccc-cccCcC
Q 001586 704 IVSVGTDAK--GNINIEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMN-AQVGLT 777 (1049)
Q Consensus 704 Vv~V~~d~~--g~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~--~di~eI~~lah~~G~ll~vD~A~~~-a~~gl~ 777 (1049)
++.+|++++ ..+|+++++++++ +++++|++++|+ .+|.+- +.+++|.++|+++|+++++|.++.. ...+-.
T Consensus 142 ~~~i~~~~~~~~~~d~~~l~~~~~---~~~~~v~l~~P~NPTG~~~s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~~~ 218 (389)
T PRK08068 142 FETMPLIAENNFLPDYTKIPEEVA---EKAKLMYLNYPNNPTGAVATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQK 218 (389)
T ss_pred EEEeecccccCCCCCHHHHHHhcc---ccceEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEehhhhhhccCCCC
Confidence 999999753 4689999999886 678999999995 699875 2467888899999999999998631 111100
Q ss_pred C-C-----CccCCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHH
Q 001586 778 S-P-----GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSAL 851 (1049)
Q Consensus 778 ~-P-----g~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~ 851 (1049)
. + +...-.+++.++.|.|++| |-++|+++.++++...+... .. ...++.. +.
T Consensus 219 ~~s~~~~~~~~~~~i~~~S~SK~~g~~----GlRiG~~~~~~~l~~~l~~~------------~~--~~~~~~~----~~ 276 (389)
T PRK08068 219 PVSFLQTPGAKDVGIELYTLSKTFNMA----GWRVAFAVGNESVIEAINLL------------QD--HLFVSLF----GA 276 (389)
T ss_pred CcChhhCCCccCCEEEEecchhccCCc----cceeEeEecCHHHHHHHHHH------------Hh--hccCCCC----hH
Confidence 0 1 1112236777888888543 67899999887666543100 00 0011110 01
Q ss_pred HHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHHH-
Q 001586 852 ILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMD- 929 (1049)
Q Consensus 852 ~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~-~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~- 929 (1049)
...++..++. -+.+-+++..+...++.+++.+.|+++ +.+ + .+.+.++ +.++++. +.+..++++.|.+
T Consensus 277 ~q~~~~~~l~-~~~~~~~~~~~~~~~~r~~~~~~L~~~g~~~-~-~~~g~~~--~~v~~~~-----~~~~~~~~~~l~~~ 346 (389)
T PRK08068 277 IQDAAIEALL-SDQSCVAELVARYESRRNAFISACREIGWEV-D-APKGSFF--AWMPVPK-----GYTSEQFADLLLEK 346 (389)
T ss_pred HHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHHHHCCCcc-c-CCCeeEE--EEEECCC-----CCCHHHHHHHHHHh
Confidence 1111122221 123334555566667788888988875 332 1 1222221 3456542 3567899999886
Q ss_pred CCcccCC-CCCCC--CCEEEEEccCCCCHHHHHHHHHHH
Q 001586 930 YGFHGPT-MSWPV--PGTLMIEPTESESKEELDRYCDAL 965 (1049)
Q Consensus 930 ~Gi~~~~-~~~p~--~~~lri~~t~~~t~eeid~fv~aL 965 (1049)
+||.+.. ..|+. .+++||++.. .++.+...++.|
T Consensus 347 ~gi~v~pg~~f~~~~~~~iRi~~~~--~~~~l~~al~~l 383 (389)
T PRK08068 347 AHVAVAPGNGFGEHGEGYVRVGLLT--DEERLREAVERI 383 (389)
T ss_pred CCEEEecchHhCccCCCeEEEEEcC--CHHHHHHHHHHH
Confidence 6998743 22332 4799999963 444444444444
No 397
>PRK06148 hypothetical protein; Provisional
Probab=99.55 E-value=6.3e-13 Score=171.26 Aligned_cols=299 Identities=18% Similarity=0.194 Sum_probs=189.4
Q ss_pred HHHHHHHHHHhhCCCc-cccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEE-EcCCCCCccHHHHHhcC----------
Q 001586 634 FNNLGEWLCTITGFDS-FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCG---------- 701 (1049)
Q Consensus 634 i~el~~~la~l~G~~~-~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VL-ip~saHg~~pa~a~~~G---------- 701 (1049)
..++.+.|++++..+. ..++.+||+++++++++.+|.| . +|.+|| +..++||....+....|
T Consensus 665 ~~~lAe~L~~~~p~~~~~v~f~nSGsEA~e~AlklAr~~---t---Gr~~ii~~~~~YHG~t~~a~s~s~~~~~~~~~~~ 738 (1013)
T PRK06148 665 IVAYAERLTATLPDGLTVAFFVNSGSEANSLALRLARAH---T---GQRDAIVLDHAYHGTTTELIDLSPYKFNRKGGKG 738 (1013)
T ss_pred HHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHHHHHh---c---CCCeEEEEcCCccCCCcchhhcCchhhcccCCCC
Confidence 4578888988885322 2477899999999999988876 2 344555 67889997654432211
Q ss_pred --CEEEEEcCCCC-----CCCC-------HHHHHHHHH---hcCCCeEEEEEEcC-Cccccccc---cHHHHHHHHHHcC
Q 001586 702 --MKIVSVGTDAK-----GNIN-------IEELRKAAE---ANRDNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNG 760 (1049)
Q Consensus 702 --~~Vv~V~~d~~-----g~iD-------~~~L~~~i~---~~~~~taaV~it~P-n~~G~i~~---di~eI~~lah~~G 760 (1049)
-.+..++.... +..| .+++++.++ .+.+++++|+++.. +..|++.+ .++++.++|+++|
T Consensus 739 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g 818 (1013)
T PRK06148 739 RPDHVEVAEVPDSYRGPERWPDAEHGRRFAESVAEQIAAMAAKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAG 818 (1013)
T ss_pred CCCCceEcCCCCccccCCCCChhhhHHHHHHHHHHHHHhhhccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhC
Confidence 11222221100 1011 245666654 23467999988754 34576652 4999999999999
Q ss_pred CEEEEeccccccccCcCCCCc-c--------CCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCC
Q 001586 761 GQVYMDGANMNAQVGLTSPGY-I--------GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIP 831 (1049)
Q Consensus 761 ~ll~vD~A~~~a~~gl~~Pg~-~--------GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~ 831 (1049)
+++|+|++ +.|+.+.|. + -+||+++ .|.+ |+|-| +|.++++++++..+....
T Consensus 819 ~llI~DEV----qtGfGRtG~~~~a~e~~gv~PDivt~--gK~l----ggG~P-lgav~~~~ei~~~~~~g~-------- 879 (1013)
T PRK06148 819 GVCIADEV----QVGFGRVGSHWWAFETQGVVPDIVTM--GKPI----GNGHP-MGAVVTTREIADSFDNGM-------- 879 (1013)
T ss_pred CEEEEEec----ccCCCCCCCcchhhhhcCCCcceeee--cccc----cCCcc-eEEEEEcHHHHhhccCCC--------
Confidence 99999987 556666653 2 3699887 4766 44445 667777877766542110
Q ss_pred CCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc---CCee--eccCCCceeeEEE
Q 001586 832 APEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFI 906 (1049)
Q Consensus 832 ~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~---~~v~--~~g~~g~~~~e~i 906 (1049)
. ..+++.|+++.++++.+.|..+.++++.+ ++.+..++|+++|+++ +.++ ..|. |. +..+-
T Consensus 880 --------~-~~~Tf~gnpla~aaa~a~L~~i~~e~l~~---~~~~~G~~l~~~L~~l~~~~~~i~~VrG~-Gl-~~gve 945 (1013)
T PRK06148 880 --------E-YFNTFGGNPVSCAIGLAVLDIIEDEDLQR---NALEIGNYLLAGLRELQDRFDIIGDVRGM-GL-FLGIE 945 (1013)
T ss_pred --------c-cccCCCCCHHHHHHHHHHHHHHhhccHHH---HHHHHHHHHHHHHHHHHHhCCCceEEeee-ce-EEEEE
Confidence 0 01234567788888999999998776554 4456788999999875 3332 1221 22 21111
Q ss_pred EeccCc-cccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEccCCCCHHHHHHHHHHHHHHHHHH
Q 001586 907 VDLRGL-KNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEI 972 (1049)
Q Consensus 907 v~~~~~-~~~~g~~~~~v~k~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~eeid~fv~aL~~i~~~i 972 (1049)
+..+.- +.........+.++|.++|+.+.... |..+.+|+.|+..+|++|||+++++|.+++.++
T Consensus 946 l~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~g-~~~~vlr~~Ppl~it~~~id~~l~~l~~~l~~~ 1011 (1013)
T PRK06148 946 LVTDRKTKAPATAIARYVKNGARERGILIGTEG-PHDNVLKIRPPLIFSRADADHLLEVLDDVLAAA 1011 (1013)
T ss_pred ecCCccccCccHHHHHHHHHHHHhCCeEEeccC-CCCCEEEEeCCccCCHHHHHHHHHHHHHHHHHH
Confidence 211100 00000113467888899999985432 225899999999999999999999999988663
No 398
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.55 E-value=3.4e-13 Score=152.20 Aligned_cols=160 Identities=22% Similarity=0.210 Sum_probs=130.5
Q ss_pred HHHHHHHHHhCCCCcceEeccchHHHHHHHHHHhhhccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCcchhhc-
Q 001586 215 NFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKDIDY- 293 (1049)
Q Consensus 215 e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a~~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~~~~l~~- 293 (1049)
.++..+++|.|.+. +.++++|.+++.++++.+. ..+++||....++..+...++.....+|++...+|+++++.
T Consensus 81 ~le~~iaal~ga~~--~l~fsSGmaA~~~al~~L~---~~g~~iV~~~~~Y~gT~~~l~~~~~~~gie~~~vd~~~~~~~ 155 (409)
T KOG0053|consen 81 VLESGIAALEGAAH--ALLFSSGMAAITVALLHLL---PAGDHIVATGDVYGGTLRILRKFLPKFGGEGDFVDVDDLKKI 155 (409)
T ss_pred HHHHHHHHHhCCce--EEEecccHHHHHHHHHHhc---CCCCcEEEeCCCcccHHHHHHHHHHHhCceeeeechhhHHHH
Confidence 45678999999876 6788899877777666543 37899999999999999999888889999999999877653
Q ss_pred ---cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCCCCC
Q 001586 294 ---KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGGP 368 (1049)
Q Consensus 294 ---l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~p~~~GaDivvgs~-k~lg~P~~~GGP 368 (1049)
+.++|++|+++.| |++..+.||++|+++||++|++++|+ +.++-++...|-.+|||||+.|+ |.|++.-..
T Consensus 156 ~~~i~~~t~~V~~ESPsNPll~v~DI~~l~~la~~~g~~vvVD-nTf~~p~~~~pL~lGADIV~hSaTKyi~Ghsdv--- 231 (409)
T KOG0053|consen 156 LKAIKENTKAVFLESPSNPLLKVPDIEKLARLAHKYGFLVVVD-NTFGSPYNQDPLPLGADIVVHSATKYIGGHSDV--- 231 (409)
T ss_pred HHhhccCceEEEEECCCCCccccccHHHHHHHHhhCCCEEEEe-CCcCcccccChhhcCCCEEEEeeeeeecCCcce---
Confidence 6788999999998 89999999999999999999999994 56676778899999999999998 877653221
Q ss_pred ceEEEEEc-hhHHhcC
Q 001586 369 HAAFLATS-QEYKRMM 383 (1049)
Q Consensus 369 ~~G~l~~~-~~l~~~l 383 (1049)
-+|.++++ +++.+++
T Consensus 232 i~G~iv~n~~~~~~~l 247 (409)
T KOG0053|consen 232 IGGSVVLNSEELASRL 247 (409)
T ss_pred eeeEEecCcHHHHHHH
Confidence 23556664 4554443
No 399
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.55 E-value=5.1e-13 Score=157.38 Aligned_cols=295 Identities=19% Similarity=0.220 Sum_probs=180.7
Q ss_pred HHHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCcc-H---HHHHhcCCEEEEEcC
Q 001586 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTN-P---ATAAMCGMKIVSVGT 709 (1049)
Q Consensus 634 i~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~-p---a~a~~~G~~Vv~V~~ 709 (1049)
..++++.++++.|.+.. +..++|..+..++++++. .++++||++...++.. . ..+...|++++.++.
T Consensus 59 ~~~le~~lA~l~g~~~~-v~~~sG~~Ai~~al~~l~--------~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~v~~ 129 (418)
T TIGR01326 59 TDVLEQRIAALEGGVAA-LAVASGQAAITYAILNLA--------QAGDNIVSSSYLYGGTYNLFKHTLKRLGIEVRFVDP 129 (418)
T ss_pred HHHHHHHHHHHhCCCeE-EEEccHHHHHHHHHHHHh--------CCCCEEEEECCCcHHHHHHHHHHHHHcCcEEEEECC
Confidence 34788999999998653 667788777755555432 2467888877655432 2 225568999999986
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-ccccccccHHHHHHHHHHcCCEEEEeccccccccCcCCCCccCCcEEE
Q 001586 710 DAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1049)
Q Consensus 710 d~~g~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~Pg~~GaDi~~ 788 (1049)
+ |+++++++++ +++++|++++|+ .+|.+. |+++|+++||++|+++++|+++.. +....|.+.|+|+++
T Consensus 130 ~-----d~~~l~~~l~---~~t~~V~le~p~NPtg~v~-dl~~I~~la~~~~i~livD~t~~~--~~~~~~l~~g~Divv 198 (418)
T TIGR01326 130 D-----DPEEFEKAID---ENTKAVFAETIGNPAINVP-DIEAIAEVAHAHGVPLIVDNTFAT--PYLCRPIDHGADIVV 198 (418)
T ss_pred C-----CHHHHHHhcC---cCCeEEEEECCCCCCCeec-CHHHHHHHHHHcCCEEEEECCCch--hhcCCchhcCCeEEE
Confidence 3 8999999997 789999999994 689887 899999999999999999998642 234567778999999
Q ss_pred eCCCcccccCCCCCCCceeEEEEcc-cccccCCCCccccCCCCCCCC----------------C---CCCCCCCCccchh
Q 001586 789 LNLHKTFCIPHGGGGPGMGPIGVKK-HLAPFLPSHPVVSTGGIPAPE----------------K---SQPLGTIAAAPWG 848 (1049)
Q Consensus 789 ~s~hK~f~~P~g~GGPg~G~i~~~~-~l~~~lpg~~vg~t~~~~~~~----------------~---~~~t~~i~sa~~g 848 (1049)
.|++|+|+. .|-.+|.+++++ .+...........+....++. + .+..+...+ |
T Consensus 199 ~S~sK~l~g----~G~~lGg~v~~~~~~~~~~~~~~~~~~~~~~q~a~~~~~~~~~~~~~~~~~~~~~~~~G~~~~-p-- 271 (418)
T TIGR01326 199 HSATKYIGG----HGTAIGGVIVDGGKFDWANGRFPLFTTPDPSYHGLVFTETFGNPAFIVKARVQLLRDLGAALS-P-- 271 (418)
T ss_pred ECccccccC----CccceEEEEEecccccccccccccccCCCCccccchhhhhhchhhHHHHHHHHHHHhcCCCCC-H--
Confidence 999999852 234466666643 332221110000000000000 0 001111111 1
Q ss_pred hHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhccCC---eeeccCCCceeeEEEEeccCccccCCCCHHHHHH
Q 001586 849 SALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYP---ILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAK 925 (1049)
Q Consensus 849 ~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~~~---v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k 925 (1049)
--+|+...|-+.+..+.++...++..+++.|.++.. +.|+|. + ..+..++++
T Consensus 272 -------~~a~~~~~~l~tl~~R~~~~~~~a~~la~~L~~~~~V~~V~yP~l------------~------~~~~~~~~~ 326 (418)
T TIGR01326 272 -------FNAFLLLQGLETLSLRMERHVENALKVAEFLEAHPKVAWVNYPGL------------A------SHPHHALAK 326 (418)
T ss_pred -------HHHHHHHCCcccHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCC------------C------CCccHHHHH
Confidence 124456666667776677777888999999987632 333321 0 112345666
Q ss_pred HHHHCCcccCCCCCCCCCEEEEEccCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCccccccch
Q 001586 926 RLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKVTCLFLHHGY 998 (1049)
Q Consensus 926 ~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~eeid~fv~aL~~i~~~i~~i~~g~~~~~~~~l~~~ph~~~~~~ 998 (1049)
+....|+ ++.+-|.+ ..+.++..+|++.|+-+ ....++ | +.+.|...|-++.++.
T Consensus 327 ~~~~~g~---------g~~~s~~l--~~~~~~~~~f~~~l~l~-~~~~sl--G----~~~sl~~~~~~~~h~~ 381 (418)
T TIGR01326 327 KYLPKGF---------GAVLSFEI--KGGREAGKKFIDALKLA-SHLANV--G----DAKSLVIHPASTTHQQ 381 (418)
T ss_pred HhccCCC---------cceEEEEe--cCCHHHHHHHHHhCCcc-eecccc--C----CCCceeeCCCCCCccc
Confidence 5433331 23333333 33567788888888632 221222 3 5666766666666644
No 400
>PRK08297 L-lysine aminotransferase; Provisional
Probab=99.55 E-value=6.2e-13 Score=157.51 Aligned_cols=295 Identities=17% Similarity=0.239 Sum_probs=186.0
Q ss_pred HHHHHHHHHHhhC---CCccccccCchHHHHHHHHHHHHHHHH----hcCC--CCCCEEE-EcCCCCCccHHHHHhcCCE
Q 001586 634 FNNLGEWLCTITG---FDSFSLQPNAGAAGEYAGLMVIRAYHK----ARGD--HHRNVCI-IPVSAHGTNPATAAMCGMK 703 (1049)
Q Consensus 634 i~el~~~la~l~G---~~~~~l~~~sGa~ge~a~l~air~y~~----~~G~--~~r~~VL-ip~saHg~~pa~a~~~G~~ 703 (1049)
..++.+.|+++++ ++. .++.+||+++++++++.+|.|.. .+|. ++|.+|| +..++||....+....|-.
T Consensus 94 ~~~la~~l~~~~~p~~~~~-v~f~~SGsEAve~AlKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als~~~~~ 172 (443)
T PRK08297 94 MARFVDTFARVLGDPELPH-LFFVDGGALAVENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSLTNTD 172 (443)
T ss_pred HHHHHHHHHhhcCCCCCCE-EEEeCchHHHHHHHHHHHHHHhhccccccCCCCCCCceEEEECCCcCCcchhhhhhcCCc
Confidence 4467778888872 232 47889999999999999998853 2343 1356677 6889999876655443311
Q ss_pred -----------EEEEcCCC-----CC----------CCCHHHHHHHHHhcCCCeEEEEEEcC-Ccccccc---ccHHHHH
Q 001586 704 -----------IVSVGTDA-----KG----------NINIEELRKAAEANRDNLSTLMVTYP-STHGVYE---EGIDEIC 753 (1049)
Q Consensus 704 -----------Vv~V~~d~-----~g----------~iD~~~L~~~i~~~~~~taaV~it~P-n~~G~i~---~di~eI~ 753 (1049)
...++... .+ .-|++++++.++++.+++++|+++.. +.-|++. ..+++|.
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~iAavI~EPi~g~~G~~~pp~~yl~~lr 252 (443)
T PRK08297 173 PRKTARFPKFDWPRIDNPKLRFPLPGEDLEEVEALEAEALAQARAAFERHPHDIACFIAEPIQGEGGDNHFRPEFFAAMR 252 (443)
T ss_pred ccccccCCCCCccccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCCcCCCHHHHHHHH
Confidence 00111100 00 01456778888877789999988754 3467763 2699999
Q ss_pred HHHHHcCCEEEEeccccccccCcCCCCcc--------CCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccc
Q 001586 754 KIIHDNGGQVYMDGANMNAQVGLTSPGYI--------GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVV 825 (1049)
Q Consensus 754 ~lah~~G~ll~vD~A~~~a~~gl~~Pg~~--------GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg 825 (1049)
++|++||+++++|++ +.|+.+.|.+ -+|++++ .|.+ | ..|++..+ ++...... ...
T Consensus 253 ~lc~~~g~llI~DEV----~tGfGRtG~~~a~~~~gv~PDiv~~--gK~l--~------~~a~l~~~-~i~~~~~~-~~~ 316 (443)
T PRK08297 253 ELCDEHDALLIFDEV----QTGVGLTGTAWAYQQLGVRPDIVAF--GKKT--Q------VCGIMAGR-RVDEVEDN-VFA 316 (443)
T ss_pred HHHHHcCCEEEEech----hhccCccchHHHHHhcCCCCCEEEe--cccc--c------ccceecch-HHHHhhhh-hcc
Confidence 999999999999997 4566666532 4799887 5865 2 22444333 22211100 000
Q ss_pred cCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc---CCee---eccCCC
Q 001586 826 STGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPIL---FRGVNG 899 (1049)
Q Consensus 826 ~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~---~~v~---~~g~~g 899 (1049)
. . +...+++.|+++.++++.+.|..+.++++. ++...+.+++.++|+++ +..+ ..|. |
T Consensus 317 ~--------~----~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~---~~~~~~g~~l~~~L~~l~~~~~~~~~~vrg~-G 380 (443)
T PRK08297 317 V--------S----SRINSTWGGNLVDMVRARRILEVIEEDGLV---ENAARQGEYLLARLEELAAEFPAVVSNVRGR-G 380 (443)
T ss_pred C--------c----cccCCCCCccHHHHHHHHHHHHHHHhcCHH---HHHHHHHHHHHHHHHHHHHHCCCcceeeecc-c
Confidence 0 0 001122345777778888888888776654 44556778888888764 3321 1221 3
Q ss_pred ceeeEEEEeccCccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEccCCCCHHHHHHHHHHHHHHHHHH
Q 001586 900 TVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEI 972 (1049)
Q Consensus 900 ~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~eeid~fv~aL~~i~~~i 972 (1049)
.+ +.+.+.. ......+.++|.++|+.+.... .+.+|++|+..+|++|||+++++|.++++++
T Consensus 381 -~~--~~i~~~~-----~~~~~~~~~~l~~~Gvl~~~~~---~~~lr~~P~l~~t~~eid~~l~~l~~~l~~~ 442 (443)
T PRK08297 381 -LM--CAFDLPT-----TADRDEVIRRLWEEGVLVLPCG---ERSIRFRPALTVTTEEIDAAIDALRRALPEV 442 (443)
T ss_pred -eE--EEEEecC-----HHHHHHHHHHHHHCCEEEecCC---CCeEEEECCccCCHHHHHHHHHHHHHHHHhh
Confidence 22 2233321 1124578888999999874322 2689999999999999999999999887653
No 401
>PRK05939 hypothetical protein; Provisional
Probab=99.55 E-value=1.5e-12 Score=152.23 Aligned_cols=229 Identities=15% Similarity=0.134 Sum_probs=152.6
Q ss_pred HHHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHH---HHHhcCCEEEEEcCC
Q 001586 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA---TAAMCGMKIVSVGTD 710 (1049)
Q Consensus 634 i~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa---~a~~~G~~Vv~V~~d 710 (1049)
..++++.++++.|.+.. +..++|..|..++++++. +++++||++...|+.+.. .+...|++++.++.
T Consensus 49 ~~~lE~~la~leg~~~~-v~~ssG~~Ai~~~l~all--------~~Gd~Vv~~~~~y~~t~~~~~~l~~~G~~v~~v~~- 118 (397)
T PRK05939 49 TAALEAKITKMEGGVGT-VCFATGMAAIAAVFLTLL--------RAGDHLVSSQFLFGNTNSLFGTLRGLGVEVTMVDA- 118 (397)
T ss_pred HHHHHHHHHHHhCCCeE-EEeCCHHHHHHHHHHHHc--------CCCCEEEECCCccccHHHHHHHHHhcCCEEEEECC-
Confidence 44788999999998764 556677766655544431 256899998887776544 24568999999987
Q ss_pred CCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CccccccccHHHHHHHHHHcCCEEEEeccccccccCcCCCCccCCcEEEe
Q 001586 711 AKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHL 789 (1049)
Q Consensus 711 ~~g~iD~~~L~~~i~~~~~~taaV~it~P-n~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~Pg~~GaDi~~~ 789 (1049)
.|+++|+++++ ++|++|++++| |.+|.+. |+++|+++||++|+++++|+++... ....|.++|+|+++.
T Consensus 119 ----~d~e~l~~~l~---~~tklV~vesp~NptG~v~-dl~~I~~la~~~gi~livD~t~a~~--~~~~~~~~gaDivv~ 188 (397)
T PRK05939 119 ----TDVQNVAAAIR---PNTRMVFVETIANPGTQVA-DLAGIGALCRERGLLYVVDNTMTSP--WLFRPKDVGASLVIN 188 (397)
T ss_pred ----CCHHHHHHhCC---CCCeEEEEECCCCCCCCHH-hHHHHHHHHHHcCCEEEEECCcccc--cccCccccCCEEEEe
Confidence 48999999997 78999999998 4689887 8999999999999999999986422 234677889999999
Q ss_pred CCCcccccCCCCCCCceeEEEEcccccccCC-CCcccc----C-CCCC-CCCC---CCCCCCCCccchhhHHHHHHHHHH
Q 001586 790 NLHKTFCIPHGGGGPGMGPIGVKKHLAPFLP-SHPVVS----T-GGIP-APEK---SQPLGTIAAAPWGSALILPISYTY 859 (1049)
Q Consensus 790 s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lp-g~~vg~----t-~~~~-~~~~---~~~t~~i~sa~~g~~~~~~~a~a~ 859 (1049)
++||+|+. .|..+|.+++.....+... ...... . .+.. ..-+ ...++.+-+ | --+|
T Consensus 189 S~sK~~~g----~g~~igg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~-p---------~~a~ 254 (397)
T PRK05939 189 SLSKYIAG----HGNALGGAVTDTGLFDWSAYPNIFPAYRKGDPQQWGLTQIRKKGLRDMGATLS-S---------EAAH 254 (397)
T ss_pred cCeecccC----CCCeEEEEEecCcccccccccchhhhhhccchhhHHHHHHHHHHHHhcCCCCC-H---------HHHH
Confidence 99999962 1333444444322111100 000000 0 0000 0000 001111111 1 2345
Q ss_pred HHHHchhhHHHHHHHHHHHHHHHHHHHhcc---CCeeecc
Q 001586 860 IAMMGSKGLTEASKIAILNANYMAKRLEKH---YPILFRG 896 (1049)
Q Consensus 860 l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~---~~v~~~g 896 (1049)
+...|-+.+..+.++..+||..+++.|+++ -.|.|++
T Consensus 255 l~~rgl~tl~~R~~~~~~na~~la~~L~~~p~V~~V~yP~ 294 (397)
T PRK05939 255 RIAIGAETLALRVDRSCSNALALAQFLEAHPKVARVYYPG 294 (397)
T ss_pred HHHcCcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCC
Confidence 667788888888999999999999999976 3456665
No 402
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.55 E-value=5.8e-13 Score=153.42 Aligned_cols=294 Identities=15% Similarity=0.073 Sum_probs=187.0
Q ss_pred HHHHHHHHHHHHHHhCCCCcc--eEeccchHHHHHHHHHHhhhccCCCCEEEEcCCCCHHHHHHHH-HhhcCCCe-EEEE
Q 001586 210 LESLLNFQTMIADLTGLPMSN--ASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICI-TRADGFDI-KVVV 285 (1049)
Q Consensus 210 le~l~e~q~~ia~L~G~~~~n--~sl~~~~Ta~~eA~~~a~~~~~~~g~~Vlv~~~~Hps~~~~l~-~~a~~~gi-~v~~ 285 (1049)
.+.+.+.++.+.+|++.+..+ +.+..+||+++||+++.+-.. +++++|+.. .|..- |. ..++..|+ ++..
T Consensus 38 ~~i~~e~~~~L~~l~~~~~~~~v~~l~GsGT~a~Eaa~~nl~~~--~g~~vLv~g-~FG~r---~~~eia~~~g~~~v~~ 111 (374)
T TIGR01365 38 KEKLAEAIKKTREMLGVPADYLIGIVPASDTGAVEMALWSMLGC--RGVDVLAWE-SFGKG---WVTDVTKQLKLPDVRV 111 (374)
T ss_pred HHHHHHHHHHHHHHhCCCCCcEEEEECCchHHHHHHHHHHcCCC--CCCeEEEEC-HHHHH---HHHHHHHhcCCCCcEE
Confidence 467778888999999985432 456789999999988865312 678898864 44332 22 33555677 3555
Q ss_pred eCcc-----hhhccCCCEeEEEEEc-CCCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-cc
Q 001586 286 SDLK-----DIDYKSGDVCGVLVQY-PGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QR 358 (1049)
Q Consensus 286 v~~~-----~l~~l~~~t~~V~v~~-pn~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~p~~~GaDivvgs~-k~ 358 (1049)
++.+ +++++..+ +.|++++ -+++|+..|+++|++.. ++++++|++ ..++|...-.-+ ++|+++.++ |.
T Consensus 112 l~~~~g~~~~~~~ve~~-~~v~~vhnETSTGv~npv~~i~~~~--~~~lliVDa-vSs~g~~~l~~d-~iDv~~tgsQK~ 186 (374)
T TIGR01365 112 LEAEYGKLPDLKKVDFK-NDVVFTWNGTTSGVRVPNGDFIPAD--REGLTICDA-TSAAFAQDLDYH-KLDVVTFSWQKV 186 (374)
T ss_pred EcCCCCCCCCHHHcCCC-CCEEEecCCCchheecccccccccc--CCCcEEEEc-cchhcCCCCChh-HCcEEEEechhc
Confidence 5432 12223222 2244554 58999999998777433 488999954 345554322222 599999999 76
Q ss_pred ccccCCCCCCceEEEEEchhHHhcCCCceeeeeecCCCCcceeeeccccc---ccccccccCCCccchhHHHHHHHHHHH
Q 001586 359 FGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTRE---QHIRRDKATSNICTAQALLANMAAMYA 435 (1049)
Q Consensus 359 lg~P~~~GGP~~G~l~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtre---q~irrekaTsni~t~~~l~a~~aa~y~ 435 (1049)
|++| ||++|++++++.+.++.-+--- .| - +. .+.++... .+.+ ..-|.|......++++..++
T Consensus 187 L~~p-----pGls~v~vs~~Al~~~~~~~~y--~~--~-~~-~~~~~~~~~~~~~~~-~~~t~~TP~v~~l~a~~~~l-- 252 (374)
T TIGR01365 187 LGGE-----GAHGMLILSPRAVARLESYTPA--WP--L-PK-IFRLTKGGKLNKKIF-EGSTINTPSMLCVEDWLDAL-- 252 (374)
T ss_pred cCCC-----CceEEEEECHHHHHHHhhcCCC--CC--C-hh-hhccccccchhhhhh-cCCCCCChHHHHHHHHHHHH--
Confidence 8766 6899999999887664311000 00 0 00 11111100 0111 12356654445555555544
Q ss_pred HHhCcc-hHHHHHHHHHHHHHHHHHHhhcCCCeEEcCC---CCcceE-EEec--C-------C-----HHHHHHHHHHcC
Q 001586 436 VYHGPE-GLKTIAQRVHGLAGTFALGLKKLGTVEVQGL---PFFDTV-KVKC--A-------D-----AHAIASAAYKIE 496 (1049)
Q Consensus 436 ~~~g~~-Gl~~ia~~~~~~a~~l~~~L~~~g~~~v~~~---~~~~~v-~i~~--~-------~-----~~~v~~~L~~~g 496 (1049)
.++..+ |++++.+|..++++.++++++++|.+.++.. ...+++ ++.. + + +.++.+.|.++|
T Consensus 253 ~~i~~egGle~~~~Rh~~~a~~l~~~l~~lg~l~~~~~~~~~rS~tvt~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 332 (374)
T TIGR01365 253 KWAESIGGLKPLIARADDNLAVLEAFVAKNNWIHFLAETPEIRSNTSVCLKVVDPAIDALDEDAQADFAKELISTLEKEG 332 (374)
T ss_pred HHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCcccCCCChhhcCCCeEEEEeCCccccccccchhhHHHHHHHHHHHHCC
Confidence 455554 8999999999999999999999974666642 223432 2333 2 1 467888999999
Q ss_pred Ceeee----ecCCeEEEEeccCCCHHHHHHHHHHHh
Q 001586 497 MNLRV----VDSNTVTASFDETTTLEDVDKLFIVFA 528 (1049)
Q Consensus 497 I~~~~----~~~~~vris~~~~~t~edid~lv~aL~ 528 (1049)
|.+.. .-+..+||.-.-..+.+||+.|++.|.
T Consensus 333 i~i~~G~~~~~~~~fRIg~~G~i~~~di~~l~~~l~ 368 (374)
T TIGR01365 333 VAYDIGSYRDAPSGLRIWCGATVEKSDLECLCPWLD 368 (374)
T ss_pred EEEeccccccCCCceEEecCCcCCHHHHHHHHHHHH
Confidence 97642 124789999999999999999999884
No 403
>PLN02656 tyrosine transaminase
Probab=99.55 E-value=1.4e-12 Score=153.42 Aligned_cols=304 Identities=14% Similarity=0.105 Sum_probs=175.0
Q ss_pred hcHHHHHHHHHHHHHHhhCC--CccccccCch-HHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCEE
Q 001586 628 QGYQEMFNNLGEWLCTITGF--DSFSLQPNAG-AAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKI 704 (1049)
Q Consensus 628 ~G~~~~i~el~~~la~l~G~--~~~~l~~~sG-a~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~V 704 (1049)
+|..++.+.+.+++....|. +...+..++| ++|.. ++++.+. .++++|+++...|..+...+...|+++
T Consensus 73 ~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~---~~~~~l~-----~~gd~Vlv~~p~y~~~~~~~~~~g~~~ 144 (409)
T PLN02656 73 VGLPQARRAIAEYLSRDLPYKLSLDDVFITSGCTQAID---VALSMLA-----RPGANILLPRPGFPIYELCAAFRHLEV 144 (409)
T ss_pred CCCHHHHHHHHHHHHHhcCCCCCcccEEEeCChHHHHH---HHHHHHh-----CCCCeEEEeCCCCCcHHHHHHHcCCEE
Confidence 46655555566666555453 3334444444 44443 3333331 256889999888876666678899999
Q ss_pred EEEcCCC-C-CCCCHHHHHHHHHhcCCCeEEEEEEcCC-cccccc--ccHHHHHHHHHHcCCEEEEeccccc-cccCcC-
Q 001586 705 VSVGTDA-K-GNINIEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMN-AQVGLT- 777 (1049)
Q Consensus 705 v~V~~d~-~-g~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~--~di~eI~~lah~~G~ll~vD~A~~~-a~~gl~- 777 (1049)
+.++++. + +.+|+++|+++++ +++++|++++|+ .+|.+- +++++|+++|+++|+++++|+++.. ...+-.
T Consensus 145 ~~i~~~~~~~~~~d~~~l~~~~~---~~~~~v~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~ 221 (409)
T PLN02656 145 RYVDLLPEKGWEVDLDAVEALAD---QNTVALVIINPGNPCGNVYSYQHLKKIAETAEKLKILVIADEVYGHLAFGSNPF 221 (409)
T ss_pred EEEeCCCcCCCCCCHHHHHHHhc---cCceEEEEECCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCc
Confidence 9999853 3 5799999999986 678999999995 689773 2699999999999999999998631 111100
Q ss_pred CC-CccC---CcEEEeCCCcccccCCCCCCCceeEEEEcc--------cccccCCCCccccCCCCCCCCCCCCCCCCCcc
Q 001586 778 SP-GYIG---ADVCHLNLHKTFCIPHGGGGPGMGPIGVKK--------HLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAA 845 (1049)
Q Consensus 778 ~P-g~~G---aDi~~~s~hK~f~~P~g~GGPg~G~i~~~~--------~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa 845 (1049)
.| ..+. .=|++.|+.|+|++| |.++|++++.. ++...+-. . . .....++
T Consensus 222 ~~~~~~~~~~~vi~~~SfSK~f~~p----GlRiG~~i~~~~~~~~~~~~~~~~~~~--~----------~-~~~~~~s-- 282 (409)
T PLN02656 222 VPMGVFGSIVPVLTLGSLSKRWIVP----GWRLGWFVTTDPSGSFRDPKIVERIKK--Y----------F-DILGGPA-- 282 (409)
T ss_pred ccHHHhcccCcEEEEcccchhccCc----ceeEEEEEEeCcccccccHHHHHHHHH--H----------H-hhhcCCC--
Confidence 11 1111 125567788887654 78999999842 22222110 0 0 0001111
Q ss_pred chhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhccCCee-eccCCCceeeEEEEeccCccccCCC-CHHH-
Q 001586 846 PWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPIL-FRGVNGTVAHEFIVDLRGLKNTAGI-EPED- 922 (1049)
Q Consensus 846 ~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~~~v~-~~g~~g~~~~e~iv~~~~~~~~~g~-~~~~- 922 (1049)
...+ .++..++.....+-+++..+...++.+++.+.|+++-... +..+.+..+ +.++++.... .+. +..+
T Consensus 283 ~~~q----~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~~p~gg~~--~w~~l~~~~~-~~~~~~~~~ 355 (409)
T PLN02656 283 TFIQ----AAVPTILEQTDESFFKKTINILKQSSDICCDRIKEIPCITCPHKPEGSMA--VMVKLNLSLL-EDISDDIDF 355 (409)
T ss_pred HHHH----HHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCCcCCCeEEE--EEEecchhhc-CCCCCHHHH
Confidence 1111 1222333221222355555556667788888887641111 111222222 3445431000 011 2334
Q ss_pred HHHHHHHCCcccC-CCCCCCCCEEEEEccCCCCHHHHHHHHHHHHHHHH
Q 001586 923 VAKRLMDYGFHGP-TMSWPVPGTLMIEPTESESKEELDRYCDALISIRE 970 (1049)
Q Consensus 923 v~k~L~~~Gi~~~-~~~~p~~~~lri~~t~~~t~eeid~fv~aL~~i~~ 970 (1049)
+.+.|.++|+.+. +-.|...+++||+++. +.++++..++.|++++.
T Consensus 356 ~~~~l~~~gV~v~pg~~fg~~~~iRi~~~~--~~e~l~eal~rl~~~~~ 402 (409)
T PLN02656 356 CFKLAREESVIILPGTAVGLKNWLRITFAA--DPSSLEEALGRIKSFYL 402 (409)
T ss_pred HHHHHHhCCEEEecchhcCCCCeEEEEeCC--CHHHHHHHHHHHHHHHH
Confidence 4566778899763 3334446899999984 56777777776666543
No 404
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.55 E-value=1.3e-12 Score=152.10 Aligned_cols=306 Identities=14% Similarity=0.074 Sum_probs=180.8
Q ss_pred HHHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCEEEEEcCCCC-
Q 001586 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK- 712 (1049)
Q Consensus 634 i~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~Vv~V~~d~~- 712 (1049)
..++++++++.+|.+.+ +..++|++|...++.++ +.+++++||+|...|......+...|++++.++++++
T Consensus 33 ~~~~e~~la~~~g~~~~-v~~~sgt~al~~~l~~~-------~~~~Gd~Viv~~~t~~~~~~~~~~~G~~~v~~d~d~~~ 104 (375)
T PRK11706 33 TRRCQQWLEQRFGSAKV-LLTPSCTAALEMAALLL-------DIQPGDEVIMPSYTFVSTANAFVLRGAKIVFVDIRPDT 104 (375)
T ss_pred HHHHHHHHHHHhCCCeE-EEECCHHHHHHHHHHHh-------CCCCCCEEEECCCCcHHHHHHHHHcCCEEEEEecCCCc
Confidence 45777889999998764 45567776653332221 1235789999988776666667889999999999877
Q ss_pred CCCCHHHHHHHHHhcCCCeEEEEEEcCCccccccccHHHHHHHHHHcCCEEEEecccccccc-CcCCCCccCCcEEEeCC
Q 001586 713 GNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQV-GLTSPGYIGADVCHLNL 791 (1049)
Q Consensus 713 g~iD~~~L~~~i~~~~~~taaV~it~Pn~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~-gl~~Pg~~GaDi~~~s~ 791 (1049)
+.+|+++|+++++ +++++|+++++ +|... |+++|.++|+++|+++++|+|+..... .-...|.+ .|+.++|+
T Consensus 105 ~~~d~~~le~~i~---~~tk~i~~~~~--~G~~~-~~~~i~~la~~~~i~vIeD~a~a~g~~~~~~~~g~~-~~~~~~Sf 177 (375)
T PRK11706 105 MNIDETLIEAAIT---PKTRAIVPVHY--AGVAC-EMDTIMALAKKHNLFVVEDAAQGVMSTYKGRALGTI-GHIGCFSF 177 (375)
T ss_pred CCcCHHHHHHhcC---CCCeEEEEeCC--CCCcc-CHHHHHHHHHHcCCEEEEECccccccccCCeeeecC-cCEEEEeC
Confidence 4799999999997 68999988764 68776 799999999999999999998753321 11112333 48888998
Q ss_pred C--cccccCCCCCCCceeEEEEcccccccCCC-CccccCCCCCCCC--CCCCCCCCCccchhhHHHHHHHHHHHHHHchh
Q 001586 792 H--KTFCIPHGGGGPGMGPIGVKKHLAPFLPS-HPVVSTGGIPAPE--KSQPLGTIAAAPWGSALILPISYTYIAMMGSK 866 (1049)
Q Consensus 792 h--K~f~~P~g~GGPg~G~i~~~~~l~~~lpg-~~vg~t~~~~~~~--~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~e 866 (1049)
| |.++. |-|++++..++++..++.. +..|........+ .......+..++.-+...++...+.++.
T Consensus 178 ~~~K~l~~-----g~gG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~~~ql~~---- 248 (375)
T PRK11706 178 HETKNYTA-----GEGGALLINDPALIERAEIIREKGTNRSQFFRGQVDKYTWVDIGSSYLPSELQAAYLWAQLEA---- 248 (375)
T ss_pred CCCccccc-----cCCeEEEECCHHHHHHHHHHHHcCCCcchhhccCCCcceeeecccccCcCHHHHHHHHHHHHH----
Confidence 8 87742 2233444434444432210 0000000000000 0000000011111122333333333332
Q ss_pred hHHHHHHHHHHHHHHHHHHHhccC--C-eeecc-CCC--ceeeEEEEeccCccccCCCCHHHHHHHHHHCCcccCCC---
Q 001586 867 GLTEASKIAILNANYMAKRLEKHY--P-ILFRG-VNG--TVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTM--- 937 (1049)
Q Consensus 867 Gl~~~~~~~~~~a~yL~~~L~~~~--~-v~~~g-~~g--~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~--- 937 (1049)
+.+..++..++++++.+.|+++- . +.++. +.+ ...+.+.+.++. +.+.+++.+.|.++||.+...
T Consensus 249 -l~~~~~~R~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~r~~l~~~L~~~gI~~~~~~~p 322 (375)
T PRK11706 249 -ADRINQRRLALWQRYYDALAPLAEAGRIELPSIPDDCKHNAHMFYIKLRD-----LEDRSALINFLKEAGIMAVFHYIP 322 (375)
T ss_pred -HHHHHHHHHHHHHHHHHHhcCCCcCCeeecCCCCCCCceeeEEEEEEECC-----cCCHHHHHHHHHHCCCCccccCCc
Confidence 44555556677888888887641 1 22111 111 123334444431 346789999999999975311
Q ss_pred -C--------------CCC-----CCEEEEEccCCCCHHHHHHHHHHHHHHH
Q 001586 938 -S--------------WPV-----PGTLMIEPTESESKEELDRYCDALISIR 969 (1049)
Q Consensus 938 -~--------------~p~-----~~~lri~~t~~~t~eeid~fv~aL~~i~ 969 (1049)
. +|. ...+.+-+....+++|+++.+++|+++.
T Consensus 323 ~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~~~~~i~~~i~~~~ 374 (375)
T PRK11706 323 LHSSPAGERFGRFHGEDRYTTKESERLLRLPLFYNLTDVEQRTVIDTILEFF 374 (375)
T ss_pred cCcchhhHhcCCCCCCChHHHHHHhCcEeccCCCCCCHHHHHHHHHHHHHHh
Confidence 1 121 2345665666678999999999998753
No 405
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=99.55 E-value=6.7e-13 Score=156.95 Aligned_cols=290 Identities=15% Similarity=0.215 Sum_probs=178.7
Q ss_pred HHHHHHHHHHhhC---CCccccccCchHHHHHHHHHHHHHHHH----hcCCCC--CCEEE-EcCCCCCccHHHHHhcCCE
Q 001586 634 FNNLGEWLCTITG---FDSFSLQPNAGAAGEYAGLMVIRAYHK----ARGDHH--RNVCI-IPVSAHGTNPATAAMCGMK 703 (1049)
Q Consensus 634 i~el~~~la~l~G---~~~~~l~~~sGa~ge~a~l~air~y~~----~~G~~~--r~~VL-ip~saHg~~pa~a~~~G~~ 703 (1049)
..++.+.|+++++ ++. .++.+||+++++++++.+|.|.. .+|.++ |.+|| ...++||....+....|-+
T Consensus 87 ~~~l~~~l~~~~~~~~~~~-v~f~~sGsEAve~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als~~~~~ 165 (431)
T TIGR03251 87 MARFVDTFARVLGDPALPH-LFFIEGGALAVENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTD 165 (431)
T ss_pred HHHHHHHHHHhcCCCCcCE-EEEeCCcHHHHHHHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchhhhhccCCc
Confidence 3466677777762 333 47889999999999999998842 234321 45666 6788999876664433311
Q ss_pred -E----------EEE--c-----CCCCC--------CCCHHHHHHHHHhcCCCeEEEEEEcC-Ccccccc---ccHHHHH
Q 001586 704 -I----------VSV--G-----TDAKG--------NINIEELRKAAEANRDNLSTLMVTYP-STHGVYE---EGIDEIC 753 (1049)
Q Consensus 704 -V----------v~V--~-----~d~~g--------~iD~~~L~~~i~~~~~~taaV~it~P-n~~G~i~---~di~eI~ 753 (1049)
. ..+ | .+.+. .-+++++++.++.+.+++++|+++.. +..|++. ..+++|.
T Consensus 166 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iAavivEPv~g~~G~~~~~~~~l~~l~ 245 (431)
T TIGR03251 166 PRKTARFPKFDWPRIDNPKLTFPLDAPNLDQVIALEEEALRQARAAFAERPHDIACFIAEPIQGEGGDNHFRPEFLRAMR 245 (431)
T ss_pred cccccCCCCCCCccCCCCcccCCccccccchhhHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcCCCHHHHHHHH
Confidence 0 001 1 11110 12456677788766789999999865 3467663 2699999
Q ss_pred HHHHHcCCEEEEeccccccccCcCCCCc--------cCCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccc
Q 001586 754 KIIHDNGGQVYMDGANMNAQVGLTSPGY--------IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVV 825 (1049)
Q Consensus 754 ~lah~~G~ll~vD~A~~~a~~gl~~Pg~--------~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg 825 (1049)
++|++||+++++|+++ .|+.+.|. ..+|++++ .|.+ |..|++..+ ++..... ....
T Consensus 246 ~lc~~~g~llI~DEV~----tG~GrtG~~~a~~~~gv~PDi~~~--gK~~--------~~~g~~~~~-~i~~~~~-~~~~ 309 (431)
T TIGR03251 246 ALCDEHDALLIFDEVQ----TGVGLTGTAWAYQQLGVQPDIVAF--GKKT--------QVCGIMAGR-RVDEVAD-NVFA 309 (431)
T ss_pred HHHHHcCCEEEEecch----hccCccchHHHHHhcCCCCCEEEe--cccC--------ccceEEecc-hHHHhhh-hccc
Confidence 9999999999999974 45555652 24799877 4653 444566433 2211100 0000
Q ss_pred cCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc---CC-eee--ccCCC
Q 001586 826 STGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YP-ILF--RGVNG 899 (1049)
Q Consensus 826 ~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~---~~-v~~--~g~~g 899 (1049)
. . +...+++.|+++.++++.+.|..+..+++.+ +..++.+++.++|+++ +. +.. .|. |
T Consensus 310 ~------~------~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~---~~~~~g~~l~~~L~~l~~~~~~~i~~vrg~-G 373 (431)
T TIGR03251 310 V------P------SRLNSTWGGNLVDMVRATRILEIIEEERLVD---NARVQGAHLLARLHELAAEFPHLVSNPRGR-G 373 (431)
T ss_pred C------c------cccCCCCCCCHHHHHHHHHHHHHHHhcCHHH---HHHHHHHHHHHHHHHHHHhCccceeccccc-c
Confidence 0 0 0111223456677778888888887766543 3345666777777653 33 321 121 2
Q ss_pred ceeeEEEEeccCccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEccCCCCHHHHHHHHHHHHH
Q 001586 900 TVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALIS 967 (1049)
Q Consensus 900 ~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~eeid~fv~aL~~ 967 (1049)
. + +.+.++. ......+.+.|.++|+.+.... .+.+|++|+..+|++|||+++++|.+
T Consensus 374 ~-~--~~i~~~~-----~~~~~~~~~~l~~~Gvl~~~~g---~~~lr~~P~l~~t~~eid~~l~~l~~ 430 (431)
T TIGR03251 374 L-M--CAFDLPS-----TADRDEVIRQLYREGVLLLGCG---ERSIRFRPPLTVTREEIDAAIDAIRR 430 (431)
T ss_pred e-e--EEEEeCC-----HHHHHHHHHHHHhCCeEEecCC---CCeEEEECCccCCHHHHHHHHHHHHh
Confidence 1 2 2233321 1124578899999999874222 26799999999999999999999875
No 406
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.55 E-value=4.6e-13 Score=157.82 Aligned_cols=298 Identities=15% Similarity=0.153 Sum_probs=179.6
Q ss_pred HHHHHHHHHHhhCCC-ccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEE-EcCCCCCccHH---HHHhcCC---EE-
Q 001586 634 FNNLGEWLCTITGFD-SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGTNPA---TAAMCGM---KI- 704 (1049)
Q Consensus 634 i~el~~~la~l~G~~-~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VL-ip~saHg~~pa---~a~~~G~---~V- 704 (1049)
..++.+.|+++++.+ ...++.+||+++++++++.+|.| . +|.+|| +..+.||.... .....+- ..
T Consensus 95 ~~~la~~L~~~~~~~~~~v~f~~SGsEA~e~AiklAr~~---t---gr~~ii~~~~~yHG~td~~~~~~~~~~~~~~~~~ 168 (433)
T PRK00615 95 EILFAEELFSYLGLEDHKIRFVSSGTEATMTAVRLARGI---T---GRSIIIKFLGCYHGHADTLLQGISFSETSLDTLT 168 (433)
T ss_pred HHHHHHHHHHhCCCCcCEEEEeCchHHHHHHHHHHHHHh---h---CCCEEEEEcCccCCCCcccCcccccCCCCcCcCC
Confidence 347788888888653 23467799999999999988876 2 355666 67889996522 1111110 00
Q ss_pred EEE---cCCCC----CCCCHHHHHHHHHhcCCCeEEEEEEcC-Cccccccc---cHHHHHHHHHHcCCEEEEeccccccc
Q 001586 705 VSV---GTDAK----GNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQ 773 (1049)
Q Consensus 705 v~V---~~d~~----g~iD~~~L~~~i~~~~~~taaV~it~P-n~~G~i~~---di~eI~~lah~~G~ll~vD~A~~~a~ 773 (1049)
... +.... ...|+++|++.++++.+++++|+++.. +..|.+.+ .+++|.++|++||+++++|+++
T Consensus 169 ~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~aavI~Epv~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~---- 244 (433)
T PRK00615 169 HLVDTDLAHPLTLSLPYNDFQIFQTVMNSLGHRVAGVIFEPICANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVV---- 244 (433)
T ss_pred CCCCCCCCCCCeEeCCCCCHHHHHHHHHhcCCceEEEEECCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEccc----
Confidence 000 00000 113789999999876678888877754 44677653 2679999999999999999985
Q ss_pred cCcCCCCc--------cCCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCcc
Q 001586 774 VGLTSPGY--------IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAA 845 (1049)
Q Consensus 774 ~gl~~Pg~--------~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa 845 (1049)
.|+ +.|. ..+|++++ .|.+ ++|.| +|+++++++++..+... +. ....++
T Consensus 245 tG~-R~G~~ga~~~~gv~PDi~~~--gK~l----ggG~p-~~av~~~~~i~~~~~~~--~~-------------~~~~~T 301 (433)
T PRK00615 245 TGF-RVAQGGAAAIYHVKPDITVY--GKIL----GGGLP-AAAVVAHKSIMDHLAPE--GT-------------IFQAGT 301 (433)
T ss_pred ccc-cccHhHHHHhcCCCCCeEEE--cccc----cCCcc-eeeeeecHHHHhhhcCC--CC-------------cccCCC
Confidence 333 2221 24688876 5766 34445 56677787776655211 00 001112
Q ss_pred chhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc-----CCeeeccCCCceeeEEEEeccC---ccc---
Q 001586 846 PWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-----YPILFRGVNGTVAHEFIVDLRG---LKN--- 914 (1049)
Q Consensus 846 ~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~-----~~v~~~g~~g~~~~e~iv~~~~---~~~--- 914 (1049)
..|+++.++++.+.|..+..+.+ .++..++.++|.++|++. +.+...+ .|. +..+.+..++ +..
T Consensus 302 ~~g~p~~~aa~la~L~~i~~~~~---~~~~~~~g~~l~~~l~~~~~~~g~~v~~~r-~G~-~~~i~~~~~~~~~~~~~~~ 376 (433)
T PRK00615 302 LSGNPLAMAAGKASINLCREQGF---YTQLSTLEQNFLSPIEEMIRSQGFPVSLVR-YGS-MFSFFFNENRPNNLAEAQL 376 (433)
T ss_pred CcccHHHHHHHHHHHHHHhcccH---HHHHHHHHHHHHHHHHHHHHHcCCCeEEEe-ece-EEEEEEeCCCCCChHHHhh
Confidence 33566777888888988876654 344556777887777653 3332222 232 2122222111 000
Q ss_pred cCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEccCCCCHHHHHHHHHHHHHHHHHHHH
Q 001586 915 TAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQ 974 (1049)
Q Consensus 915 ~~g~~~~~v~k~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~eeid~fv~aL~~i~~~i~~ 974 (1049)
........+.+.|.++|+.+....+| .. .++..+|++|||++++++.++++.+-+
T Consensus 377 ~~~~~~~~~~~~l~~~Gv~~~~~~~~---~~--~ls~~ht~~did~~~~a~~~~~~~~~~ 431 (433)
T PRK00615 377 SDIEAFQTFYQSAFSKGVYLSPSPFE---AS--FLSSAHSMENLDYAQNVLIDSLEKVFS 431 (433)
T ss_pred CCHHHHHHHHHHHHHCCeeecCcccc---cc--ceecCCCHHHHHHHHHHHHHHHHHHhc
Confidence 00001236788889999987543332 12 234456899999999999999877543
No 407
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=99.55 E-value=2.2e-12 Score=151.51 Aligned_cols=263 Identities=13% Similarity=0.120 Sum_probs=157.3
Q ss_pred CCCEEEEcCCCCCccHHHHHhcCCEEEEEcCCC--CCCCCHHHHHHHHHhcCCCeEEEEEEcCC-cccccc--ccHHHHH
Q 001586 679 HRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA--KGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEIC 753 (1049)
Q Consensus 679 ~r~~VLip~saHg~~pa~a~~~G~~Vv~V~~d~--~g~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~--~di~eI~ 753 (1049)
++++|+++...+..+...++..|++++.++++. ++.+|+++|+++++ +++++|++++|+ .+|.+- +++++|+
T Consensus 118 ~gd~v~i~~P~y~~~~~~~~~~g~~v~~~~~~~~~~~~~d~~~l~~~~~---~~~~~v~~~~p~NPtG~~~~~~~~~~l~ 194 (401)
T TIGR01264 118 AGQNILVPRPGFPLYETLAESMGIEVKLYNLLPDKSWEIDLKQLESLID---EKTAALIVNNPSNPCGSVFSRQHLEEIL 194 (401)
T ss_pred CCCEEEEeCCCChhHHHHHHHcCCEEEEeecCCccCCCCCHHHHHHHhc---cCceEEEEcCCCCCCCCCCCHHHHHHHH
Confidence 467899987766555556788999999998854 36899999999886 578889999995 589774 2599999
Q ss_pred HHHHHcCCEEEEeccccc-cccCcC-CC-CccCC--c-EEEeCCCcccccCCCCCCCceeEEEEccc------ccccCCC
Q 001586 754 KIIHDNGGQVYMDGANMN-AQVGLT-SP-GYIGA--D-VCHLNLHKTFCIPHGGGGPGMGPIGVKKH------LAPFLPS 821 (1049)
Q Consensus 754 ~lah~~G~ll~vD~A~~~-a~~gl~-~P-g~~Ga--D-i~~~s~hK~f~~P~g~GGPg~G~i~~~~~------l~~~lpg 821 (1049)
++|+++|+++++|+++.. ...+-. .| ..+.. . |++.++.|+|++| |-++|++++.+. +...+..
T Consensus 195 ~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~----GlRiG~iv~~~~~~~~~~~~~~~~~ 270 (401)
T TIGR01264 195 AVAERQCLPIIADEIYGDMVFSGATFEPLASLSSTVPILSCGGLAKRWLVP----GWRLGWIIIHDRRGILRDIRDGLVK 270 (401)
T ss_pred HHHHHCCCEEEEEhhhhhhccCCcccccHHHcCCCCcEEEEccCcccCCCc----cceEEEEEecCcchhHHHHHHHHHH
Confidence 999999999999998631 111100 11 11111 2 5667788887544 778999998641 1111100
Q ss_pred CccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCce
Q 001586 822 HPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTV 901 (1049)
Q Consensus 822 ~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~~~v~~~g~~g~~ 901 (1049)
. .. ...+++ ...+. ++..+|.....+-+++..+...++.+++.+.|+++..+.+..+.+..
T Consensus 271 --~----------~~-~~~~~~--~~~q~----a~~~~l~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~~g~ 331 (401)
T TIGR01264 271 --L----------SQ-RILGPC--TIVQG----ALPSILLRTPQEYFDGTLSVLESNAMLCYGALAAVPGLRPVMPSGAM 331 (401)
T ss_pred --H----------hh-ccCCCC--cHHHH----HHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCeee
Confidence 0 00 011111 11121 12233332112334445555666778888888874122221222222
Q ss_pred eeEEEEeccCccccCCCCHHHHHHHHH-HCCcccC-CCCCCCCCEEEEEccCCCCHHHHHHHHHHHHHHHHH
Q 001586 902 AHEFIVDLRGLKNTAGIEPEDVAKRLM-DYGFHGP-TMSWPVPGTLMIEPTESESKEELDRYCDALISIREE 971 (1049)
Q Consensus 902 ~~e~iv~~~~~~~~~g~~~~~v~k~L~-~~Gi~~~-~~~~p~~~~lri~~t~~~t~eeid~fv~aL~~i~~~ 971 (1049)
+ +.++++........+..++.++|. ++||.+. .-.|...+++||++.. .+++++..++.|.+.+++
T Consensus 332 f--~~~~~~~~~~~~~~~~~~~~~~l~~~~gI~v~pg~~f~~~~~iRis~~~--~~~~l~~~l~rl~~~~~~ 399 (401)
T TIGR01264 332 Y--MMVGIEMEHFPEFKNDVEFTERLVAEQSVFCLPGSCFEYPGFFRVVLTV--PVVMMEEACSRIQEFCER 399 (401)
T ss_pred E--EEEEecccccCCCCCHHHHHHHHHHhCCEEEeCchhcCCCCeEEEEEcC--CHHHHHHHHHHHHHHHhc
Confidence 1 344543100001124567888875 7899864 3234346899999974 478888888888776543
No 408
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.55 E-value=4.5e-13 Score=155.13 Aligned_cols=301 Identities=19% Similarity=0.167 Sum_probs=181.7
Q ss_pred HHHHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCEEEEEcCC-C
Q 001586 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTD-A 711 (1049)
Q Consensus 633 ~i~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~Vv~V~~d-~ 711 (1049)
...++++.+++.+|...+ +..+||+.|.+.++.+. |.+++++||+|.........+....|+++++++++ +
T Consensus 26 ~~~~fE~~~a~~~g~~~~-~~~~sgt~Al~~al~~l-------~~~~gdeVi~p~~t~~~~~~ai~~~G~~pv~~Di~~~ 97 (363)
T PF01041_consen 26 YVEEFEKEFAEYFGVKYA-VAVSSGTSALHLALRAL-------GLGPGDEVIVPAYTFPATASAILWAGAEPVFVDIDPE 97 (363)
T ss_dssp HHHHHHHHHHHHHTSSEE-EEESSHHHHHHHHHHHT-------TGGTTSEEEEESSS-THHHHHHHHTT-EEEEE-BETT
T ss_pred HHHHHHHHHHHHhCCCeE-EEeCChhHHHHHHHHhc-------CCCcCceEecCCCcchHHHHHHHHhccEEEEEeccCC
Confidence 466899999999998764 56778877776555542 33468999999764444444567899999999998 5
Q ss_pred CCCCCHHHHHHHHHhcCCCeEEEEEEcCCccccccccHHHHHHHHHHcCCEEEEeccccccccCc-CCCCccCCcEEEeC
Q 001586 712 KGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGL-TSPGYIGADVCHLN 790 (1049)
Q Consensus 712 ~g~iD~~~L~~~i~~~~~~taaV~it~Pn~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl-~~Pg~~GaDi~~~s 790 (1049)
++.+|+++++++|+ ++|++|++++ .+|... |+++|.++|+++|+.|+-|+|+..+..-- ...|.+| |+.++|
T Consensus 98 ~~~id~~~~~~~i~---~~t~ai~~~h--~~G~~~-d~~~i~~~~~~~~i~lIeD~a~a~g~~~~g~~~G~~g-d~~~fS 170 (363)
T PF01041_consen 98 TLNIDPEALEKAIT---PKTKAILVVH--LFGNPA-DMDAIRAIARKHGIPLIEDAAQAFGARYKGRPVGSFG-DIAIFS 170 (363)
T ss_dssp TSSB-HHHHHHHHH---TTEEEEEEE---GGGB----HHHHHHHHHHTT-EEEEE-TTTTT-EETTEETTSSS-SEEEEE
T ss_pred cCCcCHHHHHHHhc---cCccEEEEec--CCCCcc-cHHHHHHHHHHcCCcEEEccccccCceeCCEeccCCC-CceEec
Confidence 69999999999998 8999999874 678887 89999999999999999999975322111 2346666 999999
Q ss_pred CCcccccCCCCCCCceeEEEEcc-cccccC---CCCccccCCCC-CCCCCCC-CCCCCCccchhhHHHHHHHHHHHHHHc
Q 001586 791 LHKTFCIPHGGGGPGMGPIGVKK-HLAPFL---PSHPVVSTGGI-PAPEKSQ-PLGTIAAAPWGSALILPISYTYIAMMG 864 (1049)
Q Consensus 791 ~hK~f~~P~g~GGPg~G~i~~~~-~l~~~l---pg~~vg~t~~~-~~~~~~~-~t~~i~sa~~g~~~~~~~a~a~l~~lG 864 (1049)
+|.+=.++.|. +|++++++ ++.+.+ ..+ |...+. .+...+. ...+..- +...++.+.+.|+
T Consensus 171 f~~~K~i~~ge----GG~v~~~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~g~n~rm----~~~~AAigl~QL~--- 237 (363)
T PF01041_consen 171 FHPTKIITTGE----GGAVVTNDPELAERARALRNH--GRSRDAFRRYRHELPPGYNFRM----SELQAAIGLAQLK--- 237 (363)
T ss_dssp SSTTSSS-SSS-----EEEEESTHHHHHHHHHHTBT--TEETSECSTTEESSSS--B-B-----BHHHHHHHHHHHH---
T ss_pred CCCCCCCcCCC----CeeEEecHHHHHHHhhhhhcc--CcCccccccccccccCCccccc----HHHHHHHHHHHHH---
Confidence 87432223333 37888875 333221 111 110000 0000000 0011111 2233333333333
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhccCCeee-ccCCC---ceeeEEEEeccCccccCCCCHHHHHHHHHHCCcccCCCCC-
Q 001586 865 SKGLTEASKIAILNANYMAKRLEKHYPILF-RGVNG---TVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSW- 939 (1049)
Q Consensus 865 ~eGl~~~~~~~~~~a~yL~~~L~~~~~v~~-~g~~g---~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~- 939 (1049)
-+.+..++..+++.++.+.|+++..+.. ..+.+ ...+.|.+.+++- ...+.+++.+.|.++||.+.....
T Consensus 238 --~L~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~---~~~~rd~l~~~L~~~GI~~~~~~~~ 312 (363)
T PF01041_consen 238 --RLDEIIARRRENAQRYREALAGIPGIKPPPIPDGAERSSYYRFPIRLPDE---ALADRDELVEALRARGIETRPHYPK 312 (363)
T ss_dssp --THHHHHHHHHHHHHHHHHHHTTGTTEEEEGCGTTTEEBCESSEEEEETCC---GCSTHHHHHHHHHHTTBEEBCSTSS
T ss_pred --HhhhhHHHHHHHHHHHHHHHhcCCCccccccccccccccccccccccccc---ccchHHHHHHHHHHCCCcccccccC
Confidence 3455666666889999999988633211 11111 2344455555420 113578999999999998643220
Q ss_pred C-----C-------------------CCEEEEEccCCCCHHHHHHHHHHHH
Q 001586 940 P-----V-------------------PGTLMIEPTESESKEELDRYCDALI 966 (1049)
Q Consensus 940 p-----~-------------------~~~lri~~t~~~t~eeid~fv~aL~ 966 (1049)
| . ...+.+-.....+++|+++.+++|+
T Consensus 313 pl~~~~~~~~~~~~~~~~~P~ae~l~~r~l~LP~~~~lt~edv~~I~~~ir 363 (363)
T PF01041_consen 313 PLHRQPVYRSYPYYAPGDLPNAERLSQRLLSLPIHPRLTEEDVDYIAEAIR 363 (363)
T ss_dssp CGGGSGGGTTGEEEETSSSHHHHHHHHHEEEEEHSTTSCHHHHHHHHHHHH
T ss_pred chhhhHHHHhcCccccCCCHHHHHHHhCeEECcCCCCCCHHHHHHHhhccC
Confidence 1 0 1356777777889999999999875
No 409
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.54 E-value=1.9e-12 Score=150.59 Aligned_cols=212 Identities=18% Similarity=0.166 Sum_probs=148.3
Q ss_pred HHHHHHHHHHhCCCCcceEeccchHHHHHHHHHHhhhccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc---ch
Q 001586 214 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---KD 290 (1049)
Q Consensus 214 ~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a~~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~~---~~ 290 (1049)
.++++.+|++.|.+ ++.++.|+++++.++++++ .. +||+|+++...|+++...+..++...++++..++. ++
T Consensus 54 ~~le~~lA~l~g~~--~v~~~~gg~~Ai~~~l~al-l~--~GD~Vl~~~p~y~~~~~~~~~~~~~~~~~v~~~d~~d~~~ 128 (382)
T TIGR02080 54 DLLQQALAELEGGA--GAVVTNTGMSAIHLVTTAL-LG--PDDLLVAPHDCYGGTYRLLNALAKKGCFRVLFVDQGDEQA 128 (382)
T ss_pred HHHHHHHHHHhCCC--cEEEEcCHHHHHHHHHHHH-cC--CCCEEEEcCCCcHHHHHHHHHHHhhcCeEEEEECCCCHHH
Confidence 34668999999954 5889999998888777765 23 88999999999999888887766667888888765 34
Q ss_pred hhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCCCC
Q 001586 291 IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGG 367 (1049)
Q Consensus 291 l~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~p~~~GaDivvgs~-k~lg~P~~~GG 367 (1049)
+++ ++++|++|++++| |++|.+.|+++|+++||++|++++|+ +..+.+....|.++|+|++++|. |.++++. +
T Consensus 129 l~~ai~~~tklV~l~~p~NPtG~~~dl~~I~~la~~~g~~vvvD-~a~~~~~~~~pl~~gaDivv~S~sK~l~G~~---~ 204 (382)
T TIGR02080 129 LRAALAQKPKLVLIETPSNPLLRVVDIAKICHLAKAVGAVVVVD-NTFLSPALQNPLALGADLVLHSCTKYLNGHS---D 204 (382)
T ss_pred HHHhcCcCceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEE-CCCcccccCCchhhCCCEEEeecceeccCCC---C
Confidence 555 7788999999998 78999999999999999999999994 44555555566778999999998 7664321 1
Q ss_pred CceEEEEEc-hhHHhcCCCceeeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcchHHHH
Q 001586 368 PHAAFLATS-QEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTI 446 (1049)
Q Consensus 368 P~~G~l~~~-~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irrekaTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i 446 (1049)
--.|++.++ +++.+++- ..|...| +|. +++ .+ |+...|.+-|...
T Consensus 205 ~~~G~i~~~~~~~~~~l~-------------------------~~~~~~g---~~~-sp~---~a--~l~lr~l~tl~~R 250 (382)
T TIGR02080 205 VIAGAVIAKDPQVAEELA-------------------------WWANNLG---VTG-GAF---DS--YLTLRGLRTLVAR 250 (382)
T ss_pred ceeEEEEeCCHHHHHHHH-------------------------HHHHccC---CCC-CHH---HH--HHHHcccchHHHH
Confidence 125666664 34433320 0001101 110 121 11 2234444445555
Q ss_pred HHHHHHHHHHHHHHhhcCCCeE
Q 001586 447 AQRVHGLAGTFALGLKKLGTVE 468 (1049)
Q Consensus 447 a~~~~~~a~~l~~~L~~~g~~~ 468 (1049)
.++..+++..+++.|++.+.++
T Consensus 251 ~~~~~~na~~~a~~L~~~p~v~ 272 (382)
T TIGR02080 251 MRLQQRNAQAIVEYLQTQPLVK 272 (382)
T ss_pred HHHHHHHHHHHHHHHHhCCCee
Confidence 6667799999999999875454
No 410
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.54 E-value=5.8e-13 Score=154.52 Aligned_cols=217 Identities=18% Similarity=0.127 Sum_probs=153.2
Q ss_pred HHHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHH----HHHhcCCEEEEEcC
Q 001586 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA----TAAMCGMKIVSVGT 709 (1049)
Q Consensus 634 i~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa----~a~~~G~~Vv~V~~ 709 (1049)
...+++.++.+-|.+.. +...||..|..++++++. +++|+||++...++.+.. .++..|++++.++.
T Consensus 66 ~~~Le~~la~le~~~~~-v~~sSG~aAi~~~l~all--------~~GD~Vlv~~~~Y~~~~~l~~~~l~~~Gi~v~~vd~ 136 (395)
T PRK05967 66 TDALCKAIDALEGSAGT-ILVPSGLAAVTVPFLGFL--------SPGDHALIVDSVYYPTRHFCDTMLKRLGVEVEYYDP 136 (395)
T ss_pred HHHHHHHHHHHhCCCCE-EEECcHHHHHHHHHHHhc--------CCCCEEEEccCCcHHHHHHHHHHHHhcCeEEEEeCC
Confidence 44678889888876553 555667766655544431 267899998877765543 24678999999875
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CccccccccHHHHHHHHHHcCCEEEEeccccccccCcCCCCccCCcEEE
Q 001586 710 DAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1049)
Q Consensus 710 d~~g~iD~~~L~~~i~~~~~~taaV~it~P-n~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~Pg~~GaDi~~ 788 (1049)
+ +.++++++++ ++|++|++++| |.++.+. ||++|+++||++|++++||++.. -..+.+|-++|+|+++
T Consensus 137 ~-----~~e~l~~al~---~~TklV~lesPsNP~l~v~-dl~~I~~la~~~g~~vvVD~t~a--~p~~~~pl~~GaDivv 205 (395)
T PRK05967 137 E-----IGAGIAKLMR---PNTKVVHTEAPGSNTFEMQ-DIPAIAEAAHRHGAIVMMDNTWA--TPLYFRPLDFGVDISI 205 (395)
T ss_pred C-----CHHHHHHhcC---cCceEEEEECCCCCCCcHH-HHHHHHHHHHHhCCEEEEECCcc--CceecChhHcCCCEEE
Confidence 2 4578999997 78999999999 4588887 89999999999999999998753 2345689999999999
Q ss_pred eCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhH
Q 001586 789 LNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGL 868 (1049)
Q Consensus 789 ~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl 868 (1049)
.|..|+++ |.|.--+|+++.++++...+-. . + ..++..- +|+ -+|+...|-+-|
T Consensus 206 ~S~tKy~~---Gh~d~~~G~v~~~~~~~~~l~~--~----------~-~~~G~~~-~p~---------da~l~~rgl~Tl 259 (395)
T PRK05967 206 HAATKYPS---GHSDILLGTVSANEKCWPQLLE--A----------H-GTLGLCA-GPD---------DTYQILRGLRTM 259 (395)
T ss_pred EecccccC---CCCCeeEEEEEcCHHHHHHHHH--H----------H-HHcCCCC-CHH---------HHHHHHcCcccH
Confidence 99999863 2233346777766554332210 0 0 0112211 111 245667788888
Q ss_pred HHHHHHHHHHHHHHHHHHhcc---CCeeecc
Q 001586 869 TEASKIAILNANYMAKRLEKH---YPILFRG 896 (1049)
Q Consensus 869 ~~~~~~~~~~a~yL~~~L~~~---~~v~~~g 896 (1049)
.-+.++..++|..+++.|+++ -+|.|+|
T Consensus 260 ~lR~~~~~~na~~lA~~L~~hp~v~~V~yPg 290 (395)
T PRK05967 260 GIRLEHHRKSALEIARWLEGRPDVARVLHPA 290 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCcEEECCC
Confidence 888999999999999999986 3456665
No 411
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=99.54 E-value=1.1e-12 Score=152.34 Aligned_cols=289 Identities=15% Similarity=0.161 Sum_probs=178.1
Q ss_pred cHHHHHHHHHHHHHHhhCC--CccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCEEEE
Q 001586 629 GYQEMFNNLGEWLCTITGF--DSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVS 706 (1049)
Q Consensus 629 G~~~~i~el~~~la~l~G~--~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~Vv~ 706 (1049)
|..++...+.+++.+..|. +...+..++|++. +..++++.+. .+++.|+++...+..+...++..|.+++.
T Consensus 66 g~~~lr~aia~~~~~~~~~~~~~~~I~it~G~~~--~l~~~~~~~~-----~~gd~v~v~~P~y~~~~~~~~~~g~~~~~ 138 (368)
T PRK03317 66 DAVALRADLAAYLTAQTGVGLTVENVWAANGSNE--ILQQLLQAFG-----GPGRTALGFVPSYSMHPIIARGTHTEWVE 138 (368)
T ss_pred chHHHHHHHHHHhhhhccCCCChhhEEECCCHHH--HHHHHHHHhc-----CCCCEEEEeCCChHHHHHHHHhcCCeeEE
Confidence 4444455555555555554 3445666666552 2333344432 25678998877655555667889999999
Q ss_pred EcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-ccccccccHHHHHHHHHHcCCEEEEeccccc-cccCcCCCCc---
Q 001586 707 VGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMN-AQVGLTSPGY--- 781 (1049)
Q Consensus 707 V~~d~~g~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~~di~eI~~lah~~G~ll~vD~A~~~-a~~gl~~Pg~--- 781 (1049)
++.+++..+|++++++++++ .++++|++++|+ .+|.+. +.+++.++++.+++++++|.++.. ...+......
T Consensus 139 ~~~~~~~~~d~~~l~~~~~~--~~~~~i~l~~p~NPtG~~~-~~~~l~~l~~~~~~~lI~DE~y~~~~~~~~~~~~~~~~ 215 (368)
T PRK03317 139 GPRAADFTLDVDAAVAAIAE--HRPDVVFLTSPNNPTGTAL-PLDDVEAILDAAPGIVVVDEAYAEFRRSGTPSALTLLP 215 (368)
T ss_pred cccCCCCCCCHHHHHHHHhc--cCCCEEEEeCCCCCCCCCC-CHHHHHHHHHHCCceEEEeCCchhhcccCCcCHHHHHH
Confidence 88766678999999999973 356778889995 599998 699999999988999999998641 1111101001
Q ss_pred cCCcE-EEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHH
Q 001586 782 IGADV-CHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYI 860 (1049)
Q Consensus 782 ~GaDi-~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l 860 (1049)
...++ ++.++.|.|++ .|-++|++++++++...+... + .+.+++ .....++.+++
T Consensus 216 ~~~~~i~~~SfSK~~g~----~GlRiG~~~~~~~~~~~l~~~------------~--~~~~~s------~~~~~a~~~~l 271 (368)
T PRK03317 216 EYPRLVVSRTMSKAFAF----AGGRLGYLAAAPAVVDALRLV------------R--LPYHLS------AVTQAAARAAL 271 (368)
T ss_pred hCCCEEEEEechhhhcc----chhhhhhhhCCHHHHHHHHhc------------C--CCCCCC------HHHHHHHHHHh
Confidence 11244 45577787753 356789999887766554210 0 001111 11122222333
Q ss_pred HHHchhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeEEEE-eccCccccCCCCHHHHHHHHHHCCcccCCCCC
Q 001586 861 AMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIV-DLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSW 939 (1049)
Q Consensus 861 ~~lG~eGl~~~~~~~~~~a~yL~~~L~~~~~v~~~g~~g~~~~e~iv-~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~ 939 (1049)
.. .+.+.+..++..++.+++.+.|++. .+.+..+.+.+ +++ ++ .+..++.+.|.++|+.+....
T Consensus 272 ~~--~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~---~~~~~~--------~~~~~~~~~l~~~Gv~v~~~~- 336 (368)
T PRK03317 272 RH--ADELLASVAALRAERDRVVAWLREL-GLRVAPSDANF---VLFGRF--------ADRHAVWQGLLDRGVLIRDVG- 336 (368)
T ss_pred hC--HHHHHHHHHHHHHHHHHHHHHHHHC-CCEeCCCCCcE---EEEecc--------CCHHHHHHHHHHCCEEEEeCC-
Confidence 22 2233444445556677788888764 22222222322 223 32 146788999999999876433
Q ss_pred CCCCEEEEEccCCCCHHHHHHHHHHHHHHHH
Q 001586 940 PVPGTLMIEPTESESKEELDRYCDALISIRE 970 (1049)
Q Consensus 940 p~~~~lri~~t~~~t~eeid~fv~aL~~i~~ 970 (1049)
.++++|++++ +.+++++|+++|+++++
T Consensus 337 -~~~~iRi~~~---~~~~~~~~~~~l~~~~~ 363 (368)
T PRK03317 337 -IPGWLRVTIG---TPEENDAFLAALAEVLA 363 (368)
T ss_pred -CCCeEEEecC---CHHHHHHHHHHHHHHHH
Confidence 2589999985 67899999999998764
No 412
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.54 E-value=5e-13 Score=156.64 Aligned_cols=298 Identities=13% Similarity=0.087 Sum_probs=184.1
Q ss_pred HHHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHH----HHhcCCEEEEEcC
Q 001586 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGT 709 (1049)
Q Consensus 634 i~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~----a~~~G~~Vv~V~~ 709 (1049)
..++++.++++.|...+ +..+||..|..++++++. +++|+||++...++..... ....|++++++..
T Consensus 63 v~~lE~~la~leg~~~a-v~~~SG~aAi~~al~all--------~~GD~VI~~~~~Y~~T~~~~~~~l~~~Gi~v~~vd~ 133 (432)
T PRK06702 63 LAAFEQKLAELEGGVGA-VATASGQAAIMLAVLNIC--------SSGDHLLCSSTVYGGTFNLFGVSLRKLGIDVTFFNP 133 (432)
T ss_pred HHHHHHHHHHHhCCCcE-EEECCHHHHHHHHHHHhc--------CCCCEEEECCCchHHHHHHHHHHHHHCCCEEEEECC
Confidence 44788999999998764 557788777755555431 2578999987655432232 4668999999965
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-ccccccccHHHHHHHHHHcCCEEEEeccccccccCcCCCCccCCcEEE
Q 001586 710 DAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1049)
Q Consensus 710 d~~g~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~Pg~~GaDi~~ 788 (1049)
.+|+++++++|+ ++|++|+++.|+ .++.+. |+++|+++||++|+++++|++. +...+.+|-+.|+||++
T Consensus 134 ----~~d~~~l~~~I~---~~Tk~I~~e~pgnP~~~v~-Di~~I~~iA~~~gi~livD~T~--~tP~~~~pl~~GADIvv 203 (432)
T PRK06702 134 ----NLTADEIVALAN---DKTKLVYAESLGNPAMNVL-NFKEFSDAAKELEVPFIVDNTL--ATPYLCQAFEHGANIIV 203 (432)
T ss_pred ----CCCHHHHHHhCC---cCCeEEEEEcCCCcccccc-CHHHHHHHHHHcCCEEEEECCC--CchhhCChhhcCCCEEE
Confidence 479999999997 899999999994 577776 7999999999999999999874 33345678899999999
Q ss_pred eCCCcccccCCCCCCCceeEEEEcccccccCCC-CccccCCC------C-CCCC--------C---CCCCCCCCccchhh
Q 001586 789 LNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPS-HPVVSTGG------I-PAPE--------K---SQPLGTIAAAPWGS 849 (1049)
Q Consensus 789 ~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg-~~vg~t~~------~-~~~~--------~---~~~t~~i~sa~~g~ 849 (1049)
.|..|+++- .++--.|.++....+.-.... ..+..+.+ . ...+ + .+..+. +.+|
T Consensus 204 ~S~TKy~~G---hsd~l~G~v~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~sp--- 276 (432)
T PRK06702 204 HSTTKYIDG---HASSLGGIVIDGGNFDWTNGKYPELVEPDPSYHGVSYVQNFGAAAYIVKARVQLLRDYGN-CMSP--- 276 (432)
T ss_pred EccccccCC---CcceeceEEEeCCCcccccccccccccccccccccchhhccchhhHHHHHHHHHHHHccC-CCCH---
Confidence 999999851 122223444422211100000 00000000 0 0000 0 001111 2111
Q ss_pred HHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhccCC---eeeccCCCceeeEEEEeccCccccCCCCHHHHHHH
Q 001586 850 ALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYP---ILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKR 926 (1049)
Q Consensus 850 ~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~~~---v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~ 926 (1049)
--+|+...|-+.+..+.++..+|+..+++.|+++.. +.|++. + ..+..+++++
T Consensus 277 ------~~a~l~~rgL~Tl~lR~~r~~~Na~~la~~L~~~p~V~~V~yPgl------------~------~~p~~~l~~~ 332 (432)
T PRK06702 277 ------FNAYISNIGLETLHLRMERHSENALAVAKWLADHERIEWVNYPGL------------D------SNENYSLAQK 332 (432)
T ss_pred ------HHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHhCCCcceEECCCC------------C------CCccHHHHHH
Confidence 134566777778888888899999999999998632 333321 0 1234567766
Q ss_pred HHHCCcccCCCCCCCCCEEEEEccCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCccccccchh
Q 001586 927 LMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKVTCLFLHHGYF 999 (1049)
Q Consensus 927 L~~~Gi~~~~~~~p~~~~lri~~t~~~t~eeid~fv~aL~~i~~~i~~i~~g~~~~~~~~l~~~ph~~~~~~~ 999 (1049)
....|+ ++.+-|.+ ..+.++..+|++.|+-+. ...++ | +.+.|...|.+++++.+
T Consensus 333 ~~~~g~---------gg~~sf~l--~~~~~~~~~f~~~l~l~~-~a~sl--G----g~~Slv~~p~~~th~~~ 387 (432)
T PRK06702 333 YLKKGA---------SGVLTFGI--KGGLEAAKEFIANVKLAT-LVTHV--A----DARTCVIHPASTTHRQL 387 (432)
T ss_pred hCcCCC---------ceEEEEEe--cCCHHHHHHHHHhCccce-ecccc--C----CCCcceECCCCCCcccC
Confidence 544341 23333333 235777889998886432 22222 3 45566666666665443
No 413
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=99.54 E-value=4.7e-13 Score=155.16 Aligned_cols=277 Identities=12% Similarity=0.142 Sum_probs=171.5
Q ss_pred HHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCEEEEEcCCCCCCC
Q 001586 636 NLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNI 715 (1049)
Q Consensus 636 el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~Vv~V~~d~~g~i 715 (1049)
++++.+++.+|.+...+..++|++. +..++++.+. .++++|+++...+..+...+...|++++.|+.+ ++.+
T Consensus 68 ~Lr~aia~~~~~~~~~I~vt~Gs~e--~i~~~~~~l~-----~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~-~~~~ 139 (366)
T PRK01533 68 TLRQTIANKLHVKMEQVLCGSGLDE--VIQIISRAVL-----KAGDNIVTAGATFPQYRHHAIIEGCEVKEVALN-NGVY 139 (366)
T ss_pred HHHHHHHHHhCCCcceEEECCCHHH--HHHHHHHHhc-----CCCCEEEEcCCcHHHHHHHHHHcCCEEEEeecC-CCCc
Confidence 5777888888988766666666542 2333344432 256889998765555555678899999999985 4569
Q ss_pred CHHHHHHHHHhcCCCeEEEEEEcCC-ccccccc--cHHHHHHHHHHcCCEEEEecccccccc---CcCC--CC--ccCCc
Q 001586 716 NIEELRKAAEANRDNLSTLMVTYPS-THGVYEE--GIDEICKIIHDNGGQVYMDGANMNAQV---GLTS--PG--YIGAD 785 (1049)
Q Consensus 716 D~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~~--di~eI~~lah~~G~ll~vD~A~~~a~~---gl~~--Pg--~~GaD 785 (1049)
|+++|+++++ +++++|++++|| .+|.+-+ .+++|+++|++++ ++++|.++.. +. .... +. ..+--
T Consensus 140 d~~~l~~~~~---~~~~~v~i~~P~NPTG~~~~~~~l~~l~~~~~~~~-~~iiDe~y~~-~~~~~~~~~~~~~~~~~~~v 214 (366)
T PRK01533 140 DLDEISSVVD---NDTKIVWICNPNNPTGTYVNDRKLTQFIEGISENT-LIVIDEAYYE-YVTAKDFPETLPLLEKHKNI 214 (366)
T ss_pred CHHHHHHHhC---cCCcEEEEeCCCCCCCCCcCHHHHHHHHHhCCCCC-EEEEEccHHH-hhccccCcchhHHhccCCCE
Confidence 9999999986 678899999995 5998861 2444555555554 6788987531 11 0001 00 11223
Q ss_pred EEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHch
Q 001586 786 VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGS 865 (1049)
Q Consensus 786 i~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~ 865 (1049)
|++.|+.|+|++| |.++|++++.+++...+... ....+++ .....++.+++. ..
T Consensus 215 i~~~SfSK~~~l~----GlRiG~~i~~~~~~~~l~~~--------------~~~~~~~------~~~q~aa~~~l~--~~ 268 (366)
T PRK01533 215 LVLRTFSKAYGLA----SFRVGYAVGHEELIEKLNVV--------------RLPFNVS------SLAQKAATIAFG--DD 268 (366)
T ss_pred EEEeCchHHhcCh----HHHHhHHhCCHHHHHHHHHh--------------cCCCCcC------HHHHHHHHHHhC--CH
Confidence 6677788888544 77889998877665543210 0011111 111112222222 12
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHHHCCcccCCCCCCCCCE
Q 001586 866 KGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGT 944 (1049)
Q Consensus 866 eGl~~~~~~~~~~a~yL~~~L~~~-~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~p~~~~ 944 (1049)
+-+++..+...++.+++.+.|+.. +++ ++ +.+.+ +.++++ +..++.+.|.++||.+.. | +++
T Consensus 269 ~~~~~~~~~~~~~r~~~~~~l~~~g~~~-~~-~~~nf---~~~~~~--------~~~~~~~~l~~~GI~Vr~--~--~~~ 331 (366)
T PRK01533 269 EFIEEIVRVNTEGLRQYESFCKENEIPF-YQ-SQTNF---IFLPVE--------NGGEIYEACAHAGFIIRP--F--PNG 331 (366)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCcc-CC-CcCcE---EEEeCC--------CHHHHHHHHHHCCcEEcc--C--CCc
Confidence 223334444555666777777654 333 22 22322 445542 356899999999999875 3 478
Q ss_pred EEEEccCCCCHHHHHHHHHHHHHHHHH
Q 001586 945 LMIEPTESESKEELDRYCDALISIREE 971 (1049)
Q Consensus 945 lri~~t~~~t~eeid~fv~aL~~i~~~ 971 (1049)
+||++ .+.+|.++|+++|+++.+.
T Consensus 332 iRis~---~~~~~~~~l~~al~~~~~~ 355 (366)
T PRK01533 332 VRITV---GTREQNEGVISVLQQHFEN 355 (366)
T ss_pred eEEeC---CCHHHHHHHHHHHHHHHHh
Confidence 99998 4789999999999887543
No 414
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.54 E-value=5.7e-13 Score=155.98 Aligned_cols=345 Identities=16% Similarity=0.132 Sum_probs=211.3
Q ss_pred HHHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCEEEEEcCCCC-
Q 001586 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK- 712 (1049)
Q Consensus 634 i~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~Vv~V~~d~~- 712 (1049)
+.|.|+..++++|.+..-|..|+++.|+.++++++. +++|+||+++..|-++.....+.|+..+++....+
T Consensus 72 i~eAqe~aA~~fgAd~tyFvvNGTS~ank~vi~a~~--------~~GD~VLvdRN~HKSi~~glilaGa~Pvyl~p~~np 143 (557)
T COG1982 72 IKEAQELAARVFGADHTYFVVNGTSTANKAVINAVL--------TPGDKVLVDRNCHKSIHHGLILAGATPVYLEPSRNP 143 (557)
T ss_pred HHHHHHHHHHHhCCCceEEEECCccHHHHHHHHhhc--------CCCCEEEecCCccHHHHHHHHHcCCceEEecCCCCc
Confidence 779999999999999988889999988877776653 36899999999999888888899999888865332
Q ss_pred -----CCCCHHHHHHHHHhcCCCeEEEEEEcCCccccccccHHHHHHHHHHcCCEEEEeccccccccCcC-CC---CccC
Q 001586 713 -----GNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT-SP---GYIG 783 (1049)
Q Consensus 713 -----g~iD~~~L~~~i~~~~~~taaV~it~Pn~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~-~P---g~~G 783 (1049)
|.++.+.+++.+.++.+.-+++++++|+++|+.- ++++|.+.+|.+++||.+|.++..-..-.. .| -+.|
T Consensus 144 ~~gi~ggI~~~~~~~~l~~~~~~~k~~vitnpTYdGv~~-n~~~i~~~~~~~~a~v~~deah~~~~~~~~~l~~~~~~~~ 222 (557)
T COG1982 144 LYGIIGGIPLETFKEALLAHPDAEKLAVITNPTYDGVCY-NLRKIVELLHHYGAWVLYDEAHPAHFDFSPMLPESALNGG 222 (557)
T ss_pred cccccCCCCHHHHHHHHHhChhhheeEEEecCccceEee-cHHHHHHHHhhcCceEEhhhcCcccccccccCcchhhhcC
Confidence 6899999999987663322889999999999998 899999999999999999998753322111 12 2368
Q ss_pred CcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHH
Q 001586 784 ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMM 863 (1049)
Q Consensus 784 aDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~l 863 (1049)
+|+++-|.||+++ +.--...|.+++. +.+.-..+... ...- ..+++ .+.....+-.|.++...-
T Consensus 223 ~~~~tqS~HK~l~-----alSQaS~iHv~~~--~~~~~~r~nea-----~~~h---~STSP-sY~l~ASlD~Ar~~~~~~ 286 (557)
T COG1982 223 ADFVTQSTHKLLA-----ALSQASMIHVKDG--RAVNHERFNEA-----LMMH---QSTSP-SYPLMASLDVARMQEGNA 286 (557)
T ss_pred ceEEEechhhhhh-----hhhhhHHHhhCCC--ccCCHHHHHHH-----HHHH---ccCCc-hHHHHHHHHHHHHhhhhh
Confidence 9999999999984 2223344544432 11110000000 0000 11111 232222233344443433
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHhcc--CCeeeccCC-------------------CceeeEEEEeccCccccCCCCHHH
Q 001586 864 GSKGLTEASKIAILNANYMAKRLEKH--YPILFRGVN-------------------GTVAHEFIVDLRGLKNTAGIEPED 922 (1049)
Q Consensus 864 G~eGl~~~~~~~~~~a~yL~~~L~~~--~~v~~~g~~-------------------g~~~~e~iv~~~~~~~~~g~~~~~ 922 (1049)
|.+=..+..+..++.++++++..+.+ +.+..++.. +|+ -+++..+ ..|+++.+
T Consensus 287 G~~l~~~~~~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~whgf~~~~~~~~~lDP~--Klti~tp----~~Gipg~~ 360 (557)
T COG1982 287 GRELWQEVIDEAIDFRKALRRLINEIGFFPVLQPEKLDPPTGWHGFEDYADDQYFLDPT--KLTITTP----EFGIPGAI 360 (557)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeccccccCCcccccccccccccceecccc--EEEEecC----CCCCcHHH
Confidence 43333334566777777887777764 333222110 111 1222222 35899999
Q ss_pred HHHHHHHCCcccCCCCCCCCCEEEEEccCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCccccccchhhHH
Q 001586 923 VAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKVTCLFLHHGYFFSY 1002 (1049)
Q Consensus 923 v~k~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~eeid~fv~aL~~i~~~i~~i~~g~~~~~~~~l~~~ph~~~~~~~~~~ 1002 (1049)
+.+.|.++||....+. .....+.+++.+......++++++.++.+-....- ...-|...+..| .=.+..+..
T Consensus 361 v~~~L~e~gii~e~~~-d~~~lll~~~~~gk~~~lv~~L~~f~r~~d~d~~l-----~~vlp~~~~~~~--~y~~~~i~~ 432 (557)
T COG1982 361 VAKYLREHGIIPEETG-DYSNLLLFSPGIGKWQTLVDRLLEFKRRYDDDAPL-----KQVLPSLYDQYP--RYRGMGIRQ 432 (557)
T ss_pred HHHHHHHcCCeeeecC-CceeeEEeeeccchHHHHHHHHHHHHHhhhccchH-----hhhchhhhhccc--hhccccHHH
Confidence 9999999999865332 11245666666545556677777766632111000 000234444444 334445555
Q ss_pred HHHhHHHhhccCCCc
Q 001586 1003 IVKEINICISSSPWN 1017 (1049)
Q Consensus 1003 ~~~~~~~~~~~~~w~ 1017 (1049)
.|+.+.....+.+|.
T Consensus 433 l~~~~~~~~~~~~v~ 447 (557)
T COG1982 433 LCQEMHDLYVSLNVK 447 (557)
T ss_pred Hhhhhhhhhhccccc
Confidence 555555543334444
No 415
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.54 E-value=1e-12 Score=153.02 Aligned_cols=287 Identities=15% Similarity=0.148 Sum_probs=185.8
Q ss_pred HHHHHHHHHHHhCCCCcceEeccchHHHHHHHHHHhhhccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCcc---
Q 001586 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK--- 289 (1049)
Q Consensus 213 l~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a~~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~~~--- 289 (1049)
..++++.+|+++|.+. +..+.+||++...++.++... +||+||++...|+++...+. ..|++++.+|++
T Consensus 35 ~~~le~~la~~~g~~~--~v~~~sgt~al~lal~al~~~--~Gd~Viv~~~~~~~~~~~~~----~~G~~~v~vd~~~~~ 106 (379)
T PRK11658 35 NQALEQAFCQLTGNQH--AIAVSSATAGMHITLMALGIG--PGDEVITPSLTWVSTLNMIV----LLGATPVMVDVDRDT 106 (379)
T ss_pred HHHHHHHHHHHhCCCe--EEEECCHHHHHHHHHHHcCCC--CCCEEEECCCcHHHHHHHHH----HcCCEEEEEecCCCc
Confidence 4567889999999874 677889998877776665433 88999999999999987764 358888887652
Q ss_pred ------hhhc-cCCCEeEEEEEcCCCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCC---CCCcccceEEEecC-cc
Q 001586 290 ------DIDY-KSGDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK---PPGELGADIVVGSA-QR 358 (1049)
Q Consensus 290 ------~l~~-l~~~t~~V~v~~pn~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~---~p~~~GaDivvgs~-k~ 358 (1049)
++++ ++++|++|+..+ .+|...|+++|.++|+++|+++++++ ..++|... ..+.+|.|+..++. |.
T Consensus 107 ~~~d~~~l~~~i~~~tkav~~~~--~~G~~~d~~~i~~~a~~~gi~vi~D~-a~a~g~~~~~~~~g~~g~~~~Sf~~~K~ 183 (379)
T PRK11658 107 LMVTPEAIEAAITPRTKAIIPVH--YAGAPADLDAIRAIGERYGIPVIEDA-AHAVGTYYKGRHIGARGTAIFSFHAIKN 183 (379)
T ss_pred CCcCHHHHHHhcccCCeEEEEeC--CCCCcCCHHHHHHHHHHcCCeEEEEC-CCccCCeECCeecCCCCCEEEeCCCCCc
Confidence 3445 778899988666 48999999999999999999999943 34544332 35778888777776 65
Q ss_pred ccccCCCCCCceEEEEEc-hhHHhcCCC-ceeeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHH
Q 001586 359 FGVPMGYGGPHAAFLATS-QEYKRMMPG-RIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAV 436 (1049)
Q Consensus 359 lg~P~~~GGP~~G~l~~~-~~l~~~lpg-rivG~s~d~~g~~~~~l~lqtreq~irrekaTsni~t~~~l~a~~aa~y~~ 436 (1049)
+.+ | .+|++.++ +++.+++.. +..|+..+.... .....+.+..+.+.|+ | .-+..+.||+ .
T Consensus 184 l~~-----g-~GG~v~~~~~~~~~~~~~~~~~G~~~~~~~~----~~~~~~~~~~~~~~G~-n----~~~~~l~AAl--~ 246 (379)
T PRK11658 184 ITC-----A-EGGLVVTDDDELADRLRSLKFHGLGVDAFDR----QTQGRAPQAEVLTPGY-K----YNLADINAAI--A 246 (379)
T ss_pred Ccc-----c-CceEEEECCHHHHHHHHHHHHcCCCcchhhh----hcccCCCcceeecccc-c----cCcCHHHHHH--H
Confidence 532 2 34566664 565544422 222322111000 0000011111122333 1 1233455555 2
Q ss_pred HhCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEc-CC--C---CcceEEEecC----C--HHHHHHHHHHcCCeeee---
Q 001586 437 YHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQ-GL--P---FFDTVKVKCA----D--AHAIASAAYKIEMNLRV--- 501 (1049)
Q Consensus 437 ~~g~~Gl~~ia~~~~~~a~~l~~~L~~~g~~~v~-~~--~---~~~~v~i~~~----~--~~~v~~~L~~~gI~~~~--- 501 (1049)
+...++++++.++..++++++.+.|++++ +..+ .+ . ....+++.++ + ..++.+.|.++||..+.
T Consensus 247 ~~ql~~l~~~~~~r~~~a~~~~~~L~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~gI~~~~~~~ 325 (379)
T PRK11658 247 LVQLAKLEALNARRREIAARYLQALADLP-FQPLSLPAWPHQHAWHLFIIRVDEERCGISRDALMEALKERGIGTGLHFR 325 (379)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCC-CccCcCCCCCCceeEEEEEEEECCccccCCHHHHHHHHHHCCCCCcccCc
Confidence 33346889999999999999999999876 3322 11 1 1123444432 2 57899999999986431
Q ss_pred ----------------e------cCCeEEEEeccCCCHHHHHHHHHHHh
Q 001586 502 ----------------V------DSNTVTASFDETTTLEDVDKLFIVFA 528 (1049)
Q Consensus 502 ----------------~------~~~~vris~~~~~t~edid~lv~aL~ 528 (1049)
+ ....+.+-++..-|++|+++.+++++
T Consensus 326 ~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lP~~~~l~~~~~~~i~~~i~ 374 (379)
T PRK11658 326 AAHTQKYYRERFPTLSLPNTEWNSERICSLPLFPDMTDADVDRVITALQ 374 (379)
T ss_pred CcccChhhhccCCCCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHH
Confidence 0 02456677777888999999998886
No 416
>PLN02187 rooty/superroot1
Probab=99.54 E-value=5.7e-12 Score=150.36 Aligned_cols=311 Identities=14% Similarity=0.113 Sum_probs=179.9
Q ss_pred hhcHHHHHHHHHHHHHHhhCC--CccccccCch-HHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCE
Q 001586 627 AQGYQEMFNNLGEWLCTITGF--DSFSLQPNAG-AAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMK 703 (1049)
Q Consensus 627 ~~G~~~~i~el~~~la~l~G~--~~~~l~~~sG-a~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~ 703 (1049)
.+|..++...+.+++.+-.|. +...+..++| .+|...+ ++.+. .++++|+++...+..+...+...|++
T Consensus 107 ~~G~~~lR~aiA~~~~~~~~~~~~~~~I~it~G~~~al~~~---~~~l~-----~pGd~Vlv~~P~y~~y~~~~~~~g~~ 178 (462)
T PLN02187 107 GAGILPARRAVADYMNRDLPHKLTPEDIFLTAGCNQGIEIV---FESLA-----RPNANILLPRPGFPHYDARAAYSGLE 178 (462)
T ss_pred CCChHHHHHHHHHHHHHhcCCCCCcccEEEeCCHHHHHHHH---HHHhc-----CCCCEEEEeCCCCccHHHHHHHcCCE
Confidence 357666555566666554443 3334444444 4444333 33331 25688999887666665668889999
Q ss_pred EEEEcCC--CCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-cccccc--ccHHHHHHHHHHcCCEEEEecccccc-ccCcC
Q 001586 704 IVSVGTD--AKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMNA-QVGLT 777 (1049)
Q Consensus 704 Vv~V~~d--~~g~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~--~di~eI~~lah~~G~ll~vD~A~~~a-~~gl~ 777 (1049)
++.++.. ++..+|+++|+++++ +++++|++++|| .+|.+- +.+++|+++|+++|+++++|+++..- +.+-.
T Consensus 179 ~~~~~l~~~~~~~~d~~~l~~~~~---~~~~~v~i~nP~NPTG~v~s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~~ 255 (462)
T PLN02187 179 VRKFDLLPEKEWEIDLEGIEAIAD---ENTVAMVVINPNNPCGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDNP 255 (462)
T ss_pred EEEEeCccccCCccCHHHHHHhcC---CCcEEEEEeCCCCCCCCccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCC
Confidence 9999874 346899999999886 788999999995 599874 25899999999999999999986421 11100
Q ss_pred -CC-CccCC---cEEEeCCCcccccCCCCCCCceeEEEEc-cc-c---cccCCCCccccCCCCCCCCCCCCCCCCCccch
Q 001586 778 -SP-GYIGA---DVCHLNLHKTFCIPHGGGGPGMGPIGVK-KH-L---APFLPSHPVVSTGGIPAPEKSQPLGTIAAAPW 847 (1049)
Q Consensus 778 -~P-g~~Ga---Di~~~s~hK~f~~P~g~GGPg~G~i~~~-~~-l---~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~ 847 (1049)
.| ..+.. =+++.++.|+|++| |.++|++++. ++ . ...+-. . +.......+.+..
T Consensus 256 ~~s~~~~~~~~~vi~l~SfSK~f~~p----GlRiG~~v~~~p~~~~~~~~~~~~--~----------~~~~~~~~~~s~~ 319 (462)
T PLN02187 256 FVSMGKFASIVPVLTLAGISKGWVVP----GWKIGWIALNDPEGVFETTKVLQS--I----------KQNLDVTPDPATI 319 (462)
T ss_pred ceeHHHhccCCcEEEEecchhhcCCc----cceeEEEEecCchhHHHHHHHHHH--H----------HHhccccCCCCHH
Confidence 01 11111 15566788888655 7899999974 22 1 111100 0 0000000111111
Q ss_pred hhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeEEEEeccCccccCCC-CHHHHHH
Q 001586 848 GSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGI-EPEDVAK 925 (1049)
Q Consensus 848 g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~-~~v~~~g~~g~~~~e~iv~~~~~~~~~g~-~~~~v~k 925 (1049)
.+. ++.+++.....+-+++..+...++.+++.+.|+++ ....+..+.+..+ +.++++. ....++ +..++..
T Consensus 320 ~Q~----a~~~~L~~~~~~~l~~~~~~l~~~r~~l~~~L~~~~~~~~~~~P~gg~f--l~~~l~~-~~~~~~~~~~~~~~ 392 (462)
T PLN02187 320 IQA----ALPAILEKADKNFFAKKNKILKHNVDLVCDRLKDIPCVVCPKKPESCTY--LLTKLEL-SLMDNIKDDIDFCV 392 (462)
T ss_pred HHH----HHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCCCCCCEeEE--EEeecCh-hhCCCCCCHHHHHH
Confidence 121 12222222122334455556667788899999875 1111111222121 2334321 000122 3445555
Q ss_pred H-HHHCCcccC-CCCCCCCCEEEEEccCCCCHHHHHHHHHHHHHHHHHHH
Q 001586 926 R-LMDYGFHGP-TMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIA 973 (1049)
Q Consensus 926 ~-L~~~Gi~~~-~~~~p~~~~lri~~t~~~t~eeid~fv~aL~~i~~~i~ 973 (1049)
+ +.++|+.+. ...|...+++||+++. ..+.++..++.|.++++...
T Consensus 393 ~ll~~~gV~v~pG~~fg~~~~iRis~~~--~~e~l~~al~rL~~~l~~~~ 440 (462)
T PLN02187 393 KLAREENLVFLPGDALGLKNWMRITIGV--EAHMLEDALERLKGFCTRHA 440 (462)
T ss_pred HHHhhCCEEEECccccCCCCeEEEEeCC--CHHHHHHHHHHHHHHHHHhh
Confidence 4 578898753 3334446899999974 57888888888888776544
No 417
>PRK06348 aspartate aminotransferase; Provisional
Probab=99.54 E-value=2.5e-12 Score=150.06 Aligned_cols=299 Identities=13% Similarity=0.138 Sum_probs=177.6
Q ss_pred hcHHHHHHHHHHHHHHhhCCC--ccccccCchHH-HHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCEE
Q 001586 628 QGYQEMFNNLGEWLCTITGFD--SFSLQPNAGAA-GEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKI 704 (1049)
Q Consensus 628 ~G~~~~i~el~~~la~l~G~~--~~~l~~~sGa~-ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~V 704 (1049)
+|..++.+.+.+++..-.|+. ...+..++|++ |.. ++++.+. .++++|+++...+..+...++..|.++
T Consensus 66 ~G~~~lr~~ia~~~~~~~~~~~~~~~i~it~G~~~al~---~~~~~~~-----~~gd~vlv~~p~y~~~~~~~~~~g~~~ 137 (384)
T PRK06348 66 GGDVELIEEIIKYYSKNYDLSFKRNEIMATVGACHGMY---LALQSIL-----DPGDEVIIHEPYFTPYKDQIEMVGGKP 137 (384)
T ss_pred CCcHHHHHHHHHHHHHHhCCCCChhhEEEcCChHHHHH---HHHHHhc-----CCCCEEEEeCCCCcchHHHHHHcCCEE
Confidence 465555555666665555543 33454444543 442 3333331 256889999887766677788899999
Q ss_pred EEEcCCC--CCCCCHHHHHHHHHhcCCCeEEEEEEcCC-cccccc--ccHHHHHHHHHHcCCEEEEecccccc-ccCcCC
Q 001586 705 VSVGTDA--KGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMNA-QVGLTS 778 (1049)
Q Consensus 705 v~V~~d~--~g~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~--~di~eI~~lah~~G~ll~vD~A~~~a-~~gl~~ 778 (1049)
+.++.++ +..+|+++|+++++ +++++|++++|+ .+|.+- +++++|+++|+++|+++++|.++..- ...-..
T Consensus 138 ~~~~~~~~~~~~~d~~~l~~~~~---~~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~ 214 (384)
T PRK06348 138 IILETYEEDGFQINVKKLEALIT---SKTKAIILNSPNNPTGAVFSKETLEEIAKIAIEYDLFIISDEVYDGFSFYEDFV 214 (384)
T ss_pred EEecCCcCcCCcCCHHHHHHhhC---cCccEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEecccccceeCCCcc
Confidence 9998743 34699999999986 678889999995 589774 25899999999999999999986411 111001
Q ss_pred C-Cc----cCCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHH
Q 001586 779 P-GY----IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALIL 853 (1049)
Q Consensus 779 P-g~----~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~ 853 (1049)
+ .. .+-.+++.|+.|+|++| |-++|++.+++++...+-.. ......+.+...+.
T Consensus 215 ~~~~~~~~~~~vi~~~SfSK~~~l~----GlRiG~~v~~~~~~~~~~~~--------------~~~~~~~~~~~~q~--- 273 (384)
T PRK06348 215 PMATLAGMPERTITFGSFSKDFAMT----GWRIGYVIAPDYIIETAKII--------------NEGICFSAPTISQR--- 273 (384)
T ss_pred chhhcCCCcCcEEEEecchhccCCc----cccceeeecCHHHHHHHHHH--------------HHhccCCCCHHHHH---
Confidence 1 11 12236677888888544 67789999887665443100 00011111111121
Q ss_pred HHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHH-HCCc
Q 001586 854 PISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-DYGF 932 (1049)
Q Consensus 854 ~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~-~~Gi 932 (1049)
++..++.. ..+-+++..+...++.+++.+.|+.+..+.+..+.+.++ ++++++. .+.+..++++.|. ++|+
T Consensus 274 -~~~~~l~~-~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~~~~p~gg~~--~~~~~~~----~~~~~~~l~~~l~~~~gv 345 (384)
T PRK06348 274 -AAIYALKH-RDTIVPLIKEEFQKRLEYAYKRIESIPNLSLHPPKGSIY--AFINIKK----TGLSSVEFCEKLLKEAHV 345 (384)
T ss_pred -HHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHhcCCCceeccCCeeEE--EEEeccc----CCCCHHHHHHHHHHhCCE
Confidence 12222221 122233344445566788888887641222222222222 3455531 1356778888876 5799
Q ss_pred ccC-CCCCCC--CCEEEEEccCCCCHHHHHHHHHHHHHH
Q 001586 933 HGP-TMSWPV--PGTLMIEPTESESKEELDRYCDALISI 968 (1049)
Q Consensus 933 ~~~-~~~~p~--~~~lri~~t~~~t~eeid~fv~aL~~i 968 (1049)
.+. +-.|.. .+++|++++ .+.++++..++.|+++
T Consensus 346 ~v~pg~~f~~~~~~~iRi~~~--~~~~~l~~al~~l~~~ 382 (384)
T PRK06348 346 LVIPGKAFGESGEGYIRLACT--VGIEVLEEAFNRIEKM 382 (384)
T ss_pred EEcCchhhccCCCCeEEEEec--CCHHHHHHHHHHHHhh
Confidence 864 223322 478999986 4677787777776543
No 418
>PRK06107 aspartate aminotransferase; Provisional
Probab=99.54 E-value=1.2e-12 Score=153.80 Aligned_cols=306 Identities=15% Similarity=0.128 Sum_probs=184.3
Q ss_pred hcHHHHHHHHHHHHHHhhCCCc--cccccCch-HHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCEE
Q 001586 628 QGYQEMFNNLGEWLCTITGFDS--FSLQPNAG-AAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKI 704 (1049)
Q Consensus 628 ~G~~~~i~el~~~la~l~G~~~--~~l~~~sG-a~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~V 704 (1049)
+|..++...+.+++.+.+|.+. .++..++| ++|...++. ... .+++.|+++...++.++..+...|.++
T Consensus 70 ~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~---~~~-----~~gd~vl~~~p~y~~y~~~~~~~~~~~ 141 (402)
T PRK06107 70 NGTPALRKAIIAKLERRNGLHYADNEITVGGGAKQAIFLALM---ATL-----EAGDEVIIPAPYWVSYPDMVLANDGTP 141 (402)
T ss_pred CCCHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHHHH---Hhc-----CCCCEEEEecCCCcCHHHHHHHcCCEE
Confidence 4666777778888888888743 34445554 455533332 221 256889999887777777778888898
Q ss_pred EEEcCCCC--CCCCHHHHHHHHHhcCCCeEEEEEEcCC-cccccc--ccHHHHHHHHHHc-CCEEEEeccccc-cccCcC
Q 001586 705 VSVGTDAK--GNINIEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDN-GGQVYMDGANMN-AQVGLT 777 (1049)
Q Consensus 705 v~V~~d~~--g~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~--~di~eI~~lah~~-G~ll~vD~A~~~-a~~gl~ 777 (1049)
+.++++.+ +.+|+++|+++++ +++++|++++|+ .+|.+- +++++|+++|+++ |+++++|.++.. .+.+-.
T Consensus 142 ~~v~~~~~~~~~~~~~~l~~~~~---~~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~~ 218 (402)
T PRK06107 142 VIVACPEEQGFKLTPEALEAAIT---PRTRWLILNAPSNPTGAVYSRAELRALADVLLRHPHVLVLTDDIYDHIRFDDEP 218 (402)
T ss_pred EEecCCcccCCCCCHHHHHhhcC---cCceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCeEEEEehhccccccCCCC
Confidence 88888632 4699999999986 688899999995 699774 2578889999998 999999987631 011101
Q ss_pred CC-------CccCCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhH
Q 001586 778 SP-------GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSA 850 (1049)
Q Consensus 778 ~P-------g~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~ 850 (1049)
.| +..+--++..|++|.|+.| |-++|+++.++++...+... .. ....+.+...+.
T Consensus 219 ~~~~~~~~~~~~~~vi~~~S~SK~~~~p----GlRiG~~~~~~~~~~~~~~~------------~~--~~~~~~s~~~q~ 280 (402)
T PRK06107 219 TPHLLAAAPELRDRVLVTNGVSKTYAMT----GWRIGYAAGPADLIAAINKL------------QS--QSSSCPSSISQA 280 (402)
T ss_pred CCCHHHhCcCccCCEEEEeccchhhcCc----ccceeeeecCHHHHHHHHHH------------HH--hcccCCChHHHH
Confidence 11 1111235677789998644 56789999887765543210 00 011111111121
Q ss_pred HHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeEEEEeccCcc---ccCC---CCHHHHH
Q 001586 851 LILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLK---NTAG---IEPEDVA 924 (1049)
Q Consensus 851 ~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~~~v~~~g~~g~~~~e~iv~~~~~~---~~~g---~~~~~v~ 924 (1049)
++..+|. -+..-+++..+...++.+++.+.|+++-.+.+..+++.++ ++++++.+. ...+ .+..++.
T Consensus 281 ----~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~p~gg~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (402)
T PRK06107 281 ----AAAAALN-GDQSFVTESVAVYKQRRDYALALLNAIPGLSCLVPDGAFY--LYVNCAGLIGKTTPEGKVLETDQDVV 353 (402)
T ss_pred ----HHHHHhc-CChHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCcceE--EeeecccccccccccccCCCCHHHHH
Confidence 1222222 1233344445555667788888887641222222223222 334543110 0011 1445667
Q ss_pred HHH-HHCCcccC-CCCCCCCCEEEEEccCCCCHHHHHHHHHHHHHHHHH
Q 001586 925 KRL-MDYGFHGP-TMSWPVPGTLMIEPTESESKEELDRYCDALISIREE 971 (1049)
Q Consensus 925 k~L-~~~Gi~~~-~~~~p~~~~lri~~t~~~t~eeid~fv~aL~~i~~~ 971 (1049)
+.| .++|+.+. +-.|...+++|+++.. +.+++++.++.|.+.+++
T Consensus 354 ~~l~~~~gv~v~pg~~Fg~~~~iRis~~~--~~e~l~~~l~~l~~~l~~ 400 (402)
T PRK06107 354 LYLLDSAGVAVVQGTAYGLSPYFRLSIAT--SLETLEEACARIERAVAA 400 (402)
T ss_pred HHHHHhCCEEEeCccccCCCCeEEEEeCC--CHHHHHHHHHHHHHHHHh
Confidence 655 56899864 3345456899999984 588888888888776644
No 419
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=99.54 E-value=4.5e-13 Score=155.06 Aligned_cols=315 Identities=17% Similarity=0.210 Sum_probs=182.3
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHhcCCC-ccc--cccCCCCCCCCCcHHHHHHHHhCCccccccCCChhhHhhhHHHHHHH
Q 001586 139 MKFSKFDEGLTESQMIEHMQKLASMNK-VYK--SFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLN 215 (1049)
Q Consensus 139 ~~lp~~~~~~sE~e~~~~~~~la~~n~-~~~--~~lG~g~y~~~~p~~i~~~~~~~~~~~t~ytpyq~e~sqg~le~l~e 215 (1049)
..+| +++.+.+|+++.+++...... .+. .|.|.-.-+. .|+.+.-.++.. .+-. ..+..+.+....+.-.+
T Consensus 10 ~~lp--~~~~~~~~vl~~~~~~l~~~~~~~~~P~~~~~~~~~~-~~~~i~~~~l~~--~~n~-n~~~~~~~P~~~~~E~~ 83 (373)
T PF00282_consen 10 EELP--EEGESLEEVLKDLREILAPGVTHWHHPRFFGFVPGGP-SPASILADLLAS--ALNQ-NGFTWEASPAATEIERE 83 (373)
T ss_dssp CCHH--SSHH-HHHHHHHHHHHTHGCS-TTTSTTBESSSHT---CHHHHHHHHHHH--HHT--BTTSTTTSHHHHHHHHH
T ss_pred cccc--cCCCCHHHHHHHHHHHhhccCCCCCChhHhhhccCCc-cHHHHHHHHHHh--hhcc-cccccccccccccchHH
Confidence 4566 467789999999987654432 222 2332221111 233322122210 0100 22333445555666677
Q ss_pred HHHHHHHHhCCCC-------cceEeccchHHHHHHHHHHhhhc-------cC----CCCEEEEcCCCCHHHHHHHHHhhc
Q 001586 216 FQTMIADLTGLPM-------SNASLLDEGTAAAEAMAMCNNIQ-------KG----KKKTFIIASNCHPQTIDICITRAD 277 (1049)
Q Consensus 216 ~q~~ia~L~G~~~-------~n~sl~~~~Ta~~eA~~~a~~~~-------~~----~g~~Vlv~~~~Hps~~~~l~~~a~ 277 (1049)
.-.++++|+|++. +...+++|||.+.-..+++.|.. .+ ++-.|++++..|.++.+.++.
T Consensus 84 vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~aH~S~~Kaa~~--- 160 (373)
T PF00282_consen 84 VIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQAHYSIEKAARI--- 160 (373)
T ss_dssp HHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS-THHHHHHHH---
T ss_pred HHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhcccccccccccccccccccHHHHhcce---
Confidence 7889999999993 35678889986655444433311 01 223688999999999888754
Q ss_pred CCCeEEEEeCcc--------hhhc-c-----CCCEe-EEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCC
Q 001586 278 GFDIKVVVSDLK--------DIDY-K-----SGDVC-GVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTIL 341 (1049)
Q Consensus 278 ~~gi~v~~v~~~--------~l~~-l-----~~~t~-~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l 341 (1049)
+|+.++.|+.+ +|++ + ...+. +|+.+.+ +.+|.++|+++|+++|++++.+++|++-.-+..++
T Consensus 161 -lGlg~~~I~~~~~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~l~~i~~i~~~~~~wlHVDaA~gg~~~~ 239 (373)
T PF00282_consen 161 -LGLGVRKIPTDEDGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAIDPLEEIADICEKYNIWLHVDAAYGGSALL 239 (373)
T ss_dssp -TTSEEEEE-BBTTSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-SHHHHHHHHHHCT-EEEEEETTGGGGGG
T ss_pred -eeeEEEEecCCcchhhhHHHhhhhhcccccccccceeeeccCCCcccccccCHHHHhhhccccceeeeecccccccccc
Confidence 57778777763 3443 2 12233 5666776 67999999999999999999999996532221122
Q ss_pred CCC------CcccceEEEecC-ccccccCCCCCCceEEEEEchh--HHhcC--CCceeeeeecCCCCcceeeeccccccc
Q 001586 342 KPP------GELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQE--YKRMM--PGRIVGVSIDSSGKPALRVAMQTREQH 410 (1049)
Q Consensus 342 ~~p------~~~GaDivvgs~-k~lg~P~~~GGP~~G~l~~~~~--l~~~l--pgrivG~s~d~~g~~~~~l~lqtreq~ 410 (1049)
.+. +--+||-+..+. |+++.|++ +|++.+|++ +.+.+ ...+++-. +.+....+
T Consensus 240 ~~~~~~~~~gi~~adSit~d~HK~l~~P~~-----~~~~l~r~~~~l~~~~~~~~~Yl~~~-~~~~~~~~---------- 303 (373)
T PF00282_consen 240 SPEYRHLLFGIERADSITIDPHKWLGVPYG-----CGVLLVRDKSDLRDAFSINADYLGND-DRESDESY---------- 303 (373)
T ss_dssp HCTTGGGGTTGGGESEEEEETTTTTS-SSS------EEEEESSGGGHHGGGEEEETCTT-S--SSS-GGG----------
T ss_pred cccccccccccccccccccchhhhhcCCcc-----ceeEEeecccchHHHhccChhhhccc-cccccccc----------
Confidence 111 224699999999 66777865 567888864 22222 11111100 00000000
Q ss_pred ccccccCCCccchhHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEcCCCCcceEEEec
Q 001586 411 IRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKC 482 (1049)
Q Consensus 411 irrekaTsni~t~~~l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~g~~~v~~~~~~~~v~i~~ 482 (1049)
.-++..+.......++..-+.+..+|.+|++++.++..++|++|++.|++.+++++++++.+..|+|+.
T Consensus 304 ---~~~~~tl~~SR~~~alk~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~~~~~el~~~~~~~~vcFr~ 372 (373)
T PF00282_consen 304 ---DYGDYTLQGSRRFRALKLWATLKSLGREGYRERIRRCIELARYLADRLRKDPRFELVNEPDLNIVCFRY 372 (373)
T ss_dssp ---CEEEGSSSSSGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEESSTTSSSEEEEEE
T ss_pred ---ccccccccccccchHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEcCCCceEEEEEe
Confidence 001111111122223322233588999999999999999999999999998669999887788888864
No 420
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.53 E-value=5.5e-13 Score=156.09 Aligned_cols=279 Identities=14% Similarity=0.137 Sum_probs=187.8
Q ss_pred HHHHHHHHHHHHhCCCCcceEeccchHHHHHHHHHHhhhccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc---
Q 001586 212 SLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--- 288 (1049)
Q Consensus 212 ~l~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a~~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~~--- 288 (1049)
.+.|+|+..|+++|.+.+.+ +++|.|++..++.+|.. ++||+||+++++|.|+...+-. .|...+++.+
T Consensus 71 ~i~eAqe~aA~~fgAd~tyF-vvNGTS~ank~vi~a~~---~~GD~VLvdRN~HKSi~~glil----aGa~Pvyl~p~~n 142 (557)
T COG1982 71 PIKEAQELAARVFGADHTYF-VVNGTSTANKAVINAVL---TPGDKVLVDRNCHKSIHHGLIL----AGATPVYLEPSRN 142 (557)
T ss_pred cHHHHHHHHHHHhCCCceEE-EECCccHHHHHHHHhhc---CCCCEEEecCCccHHHHHHHHH----cCCceEEecCCCC
Confidence 57899999999999998655 66788888889888764 3899999999999999988532 3666666543
Q ss_pred -----------chhhc--c-CCCE-eEEEEEcCCCCeeeccHHHHHHHHHhCCcEEEEE-eccccc---cCCCC-CCccc
Q 001586 289 -----------KDIDY--K-SGDV-CGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMA-TDLLAL---TILKP-PGELG 348 (1049)
Q Consensus 289 -----------~~l~~--l-~~~t-~~V~v~~pn~~G~i~di~~I~~~ah~~galliV~-a~~~al---g~l~~-p~~~G 348 (1049)
+.+++ + .++. +++++|+|+++|++.|+++|.+.+|..++++.|+ +++.-. +.+.. ..+.|
T Consensus 143 p~~gi~ggI~~~~~~~~l~~~~~~~k~~vitnpTYdGv~~n~~~i~~~~~~~~a~v~~deah~~~~~~~~~l~~~~~~~~ 222 (557)
T COG1982 143 PLYGIIGGIPLETFKEALLAHPDAEKLAVITNPTYDGVCYNLRKIVELLHHYGAWVLYDEAHPAHFDFSPMLPESALNGG 222 (557)
T ss_pred ccccccCCCCHHHHHHHHHhChhhheeEEEecCccceEeecHHHHHHHHhhcCceEEhhhcCcccccccccCcchhhhcC
Confidence 22332 2 3456 8999999999999999999999999999999992 222211 22222 23489
Q ss_pred ceEEEecCccccccCCCCCCceEEEEEchhHHhcCCCceeeeeecCCCCcceeeecccccccccccccCCCccchhHHHH
Q 001586 349 ADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLA 428 (1049)
Q Consensus 349 aDivvgs~k~lg~P~~~GGP~~G~l~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irrekaTsni~t~~~l~a 428 (1049)
+|+++.|.+|...-+ -++.++++++. +.+. .++ =+.+|.+ .-|+++.+.
T Consensus 223 ~~~~tqS~HK~l~al----SQaS~iHv~~~--~~~~-------~~r-~nea~~~-----------------h~STSPsY~ 271 (557)
T COG1982 223 ADFVTQSTHKLLAAL----SQASMIHVKDG--RAVN-------HER-FNEALMM-----------------HQSTSPSYP 271 (557)
T ss_pred ceEEEechhhhhhhh----hhhHHHhhCCC--ccCC-------HHH-HHHHHHH-----------------HccCCchHH
Confidence 999999995543222 24556665543 1111 000 0111211 123467777
Q ss_pred HHHHHHH--HHhCcchHH---HHHHHHHHHHHHHHHHhhcCCCeEEcCCC-------------------Ccce--EEEec
Q 001586 429 NMAAMYA--VYHGPEGLK---TIAQRVHGLAGTFALGLKKLGTVEVQGLP-------------------FFDT--VKVKC 482 (1049)
Q Consensus 429 ~~aa~y~--~~~g~~Gl~---~ia~~~~~~a~~l~~~L~~~g~~~v~~~~-------------------~~~~--v~i~~ 482 (1049)
++|++-. .+.+..|-+ +..+...+..+++++..++++++.++.+. .+|+ ++|..
T Consensus 272 l~ASlD~Ar~~~~~~G~~l~~~~~~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~whgf~~~~~~~~~lDP~Klti~t 351 (557)
T COG1982 272 LMASLDVARMQEGNAGRELWQEVIDEAIDFRKALRRLINEIGFFPVLQPEKLDPPTGWHGFEDYADDQYFLDPTKLTITT 351 (557)
T ss_pred HHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeccccccCCcccccccccccccceeccccEEEEec
Confidence 7777732 234444432 23555667777787877777658776432 1354 56665
Q ss_pred CC----HHHHHHHHHHcCCeeeeecCC--eEEEEeccCCCHHHHHHHHHHHhC
Q 001586 483 AD----AHAIASAAYKIEMNLRVVDSN--TVTASFDETTTLEDVDKLFIVFAG 529 (1049)
Q Consensus 483 ~~----~~~v~~~L~~~gI~~~~~~~~--~vris~~~~~t~edid~lv~aL~~ 529 (1049)
+. +..|.+.|+++||........ .+.+++.+..+..+++.|++.+..
T Consensus 352 p~~Gipg~~v~~~L~e~gii~e~~~d~~~lll~~~~~gk~~~lv~~L~~f~r~ 404 (557)
T COG1982 352 PEFGIPGAIVAKYLREHGIIPEETGDYSNLLLFSPGIGKWQTLVDRLLEFKRR 404 (557)
T ss_pred CCCCCcHHHHHHHHHHcCCeeeecCCceeeEEeeeccchHHHHHHHHHHHHHh
Confidence 43 789999999999988776543 455666666888899999998863
No 421
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.53 E-value=7.3e-13 Score=152.09 Aligned_cols=280 Identities=18% Similarity=0.161 Sum_probs=172.9
Q ss_pred cHHHHHHHHHHHHHHhhCCCcc-ccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEc---CCCCCccHHHHHhcCCEE
Q 001586 629 GYQEMFNNLGEWLCTITGFDSF-SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIP---VSAHGTNPATAAMCGMKI 704 (1049)
Q Consensus 629 G~~~~i~el~~~la~l~G~~~~-~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip---~saHg~~pa~a~~~G~~V 704 (1049)
|..+...++++.+++++|.+.. .+..++|.+++.+++.++. +++++||++ ...|.+....+++.|.++
T Consensus 51 g~~~~~~~Le~~lA~~~g~~~e~ilv~~gg~~a~~~~~~al~--------~~gd~Vli~~~d~p~~~s~~~~~~l~ga~~ 122 (346)
T TIGR03576 51 GPAIFEEKVQELGREHLGGPEEKILVFNRTSSAILATILALE--------PPGRKVVHYLPEKPAHPSIPRSCKLAGAEY 122 (346)
T ss_pred CCHHHHHHHHHHHHHHcCCCcceEEEECCHHHHHHHHHHHhC--------CCCCEEEECCCCCCCchhHHHHHHHcCCEE
Confidence 4556788999999999999543 3566777777755554432 256888874 346666666788899886
Q ss_pred EEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCCccccc---cccHHHHHHHHHHcCCEEEEeccccccccCc-CC-C
Q 001586 705 VSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVY---EEGIDEICKIIHDNGGQVYMDGANMNAQVGL-TS-P 779 (1049)
Q Consensus 705 v~V~~d~~g~iD~~~L~~~i~~~~~~taaV~it~Pn~~G~i---~~di~eI~~lah~~G~ll~vD~A~~~a~~gl-~~-P 779 (1049)
+.. .|+++++. . +++++|+++..+..|.+ + ++++|+++|+++|++|+||.|+.....+. .. +
T Consensus 123 ~~~-------~~l~~l~~-~----~~~~lIiitg~s~~G~v~~~~-~L~~i~~la~~~~~~livDEAy~~~~~~~~~~~~ 189 (346)
T TIGR03576 123 FES-------DELSELKK-I----DGTSLVVITGSTMDLKVVSEE-DLKRVIKQAKSKEAIVLVDDASGARVRRLYGQPP 189 (346)
T ss_pred ecc-------CCHHHHhh-C----cCceEEEEECCCCCCcccCHH-HHHHHHHHHHHcCCEEEEECCccccccccCCCCC
Confidence 432 24555432 1 46788888776777876 4 79999999999999999999975432221 11 1
Q ss_pred -CccCCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHH
Q 001586 780 -GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYT 858 (1049)
Q Consensus 780 -g~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a 858 (1049)
-.++.|+++.+++|++ +|+.+|++++++++.+.+.... +.. ..+. ++..+.++.+
T Consensus 190 ~~~~~~divv~s~SKal------aG~r~G~v~~~~~li~~l~~~~-----------~~~---~~s~----~~~~~~aa~~ 245 (346)
T TIGR03576 190 ALDLGADLVVTSTDKLM------DGPRGGLLAGRKELVDKIKSVG-----------EQF---GLEA----QAPLLAAVVR 245 (346)
T ss_pred HHHcCCcEEEeccchhc------cccceEEEEeCHHHHHHHHHhh-----------cCc---ccCc----cHHHHHHHHH
Confidence 2347899999999965 4788899999987766543110 000 1111 1112223344
Q ss_pred HHHHHchhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeEEEEeccCccccCCCCH-HHHHHHHHHCCcccCCC
Q 001586 859 YIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEP-EDVAKRLMDYGFHGPTM 937 (1049)
Q Consensus 859 ~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~-~~v~k~L~~~Gi~~~~~ 937 (1049)
.|..+. .....+...++.+++.+.+++ +.+ ++.+.+ + +.++++ +.+. +.+.+.|.++|+.+...
T Consensus 246 aL~~~~---~~~~~~~l~~r~~~~~~~l~~-~~~-~~~~~~--f--~~~~~~------~~~~~~~~~~ll~~~gV~v~~~ 310 (346)
T TIGR03576 246 ALEEFE---LSRIRDAFKRKEEVYLRLFDK-LNV-ERTPTG--F--VIKGVE------EEKLIEIGLDLLRNYGIITITA 310 (346)
T ss_pred HHhhcc---HHHHHHHHHHHHHHHHHHHHh-CCC-CcCCCe--E--EEEeCC------CCCHHHHHHHHHHhCCEEEeCC
Confidence 444332 223334445566666666664 333 222111 1 334553 1122 44555666789987543
Q ss_pred -CCC-CCCEEEEEccCCC-CHHHHHHHHHHHHHH
Q 001586 938 -SWP-VPGTLMIEPTESE-SKEELDRYCDALISI 968 (1049)
Q Consensus 938 -~~p-~~~~lri~~t~~~-t~eeid~fv~aL~~i 968 (1049)
.|+ ..+++||++.... ++.|.++|+++|++.
T Consensus 311 ~~f~~~~~~vRis~~~~~~~~~~~~~~~~al~~~ 344 (346)
T TIGR03576 311 VGMPGASKTLRFDLAAKDAERIGDDYLVEAVKDS 344 (346)
T ss_pred cccCCCCCeEEEEEecChHHhcCHHHHHHHHHhc
Confidence 343 3689999987432 233799999999764
No 422
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.53 E-value=3.9e-12 Score=151.43 Aligned_cols=299 Identities=17% Similarity=0.194 Sum_probs=182.5
Q ss_pred HHHHHHHHHHhhCCC--ccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEE-EcCCCCCccHHHHHhcCC--------
Q 001586 634 FNNLGEWLCTITGFD--SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGM-------- 702 (1049)
Q Consensus 634 i~el~~~la~l~G~~--~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VL-ip~saHg~~pa~a~~~G~-------- 702 (1049)
..++.+.|+++++.. ...++.+||+++++++++.+|.|. +|++|| ...++||....+....|-
T Consensus 99 ~~~la~~L~~~~p~~~~~~v~f~~sGseA~e~AlklAr~~t------gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~ 172 (451)
T PRK06918 99 YIELAEKLAALAPGSFDKKVLFLNSGAEAVENAVKIARKYT------KRQGIISFSRGFHGRTLMTMTMTSKVKPYKFGF 172 (451)
T ss_pred HHHHHHHHHHhCCCCCCCEEEEcCCcHHHHHHHHHHHHHHh------CCCcEEEECCCcCccchhhhhhcCCCccccccC
Confidence 457888999998532 235788999999999999998872 345566 678899988766443221
Q ss_pred -----EEEEEcCCC-----CCCCC-------HHHHHHHHHh--cCCCeEEEEEEcCC-ccccccc---cHHHHHHHHHHc
Q 001586 703 -----KIVSVGTDA-----KGNIN-------IEELRKAAEA--NRDNLSTLMVTYPS-THGVYEE---GIDEICKIIHDN 759 (1049)
Q Consensus 703 -----~Vv~V~~d~-----~g~iD-------~~~L~~~i~~--~~~~taaV~it~Pn-~~G~i~~---di~eI~~lah~~ 759 (1049)
.+..+|... .+..+ ++.+++.+.. +.+++++|+++... ..|++.+ .+++|.++|++|
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAavi~EPi~g~gG~~~~~~~~l~~l~~l~~~~ 252 (451)
T PRK06918 173 GPFAPEVYKAPFPYEYRRPEGLTEEQYDDFMIEEFKNFFISEVAPETIAAVVMEPVQGEGGFIVPSKKFVQEVRNICSEH 252 (451)
T ss_pred CCCCCCcEEcCCCccccccccCchHHHHHHHHHHHHHHHHhhcCCCceEEEEECcccCCCCCccCCHHHHHHHHHHHHHc
Confidence 133444321 11111 2334444421 23678888887543 3565432 389999999999
Q ss_pred CCEEEEeccccccccCcCCCC------ccC--CcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCC
Q 001586 760 GGQVYMDGANMNAQVGLTSPG------YIG--ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIP 831 (1049)
Q Consensus 760 G~ll~vD~A~~~a~~gl~~Pg------~~G--aDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~ 831 (1049)
|+++++|+++ .++.+.| .++ +|++++ .|.++ +|-.+|++++++++...+....
T Consensus 253 gillI~DEV~----tg~gr~g~~~a~~~~~v~pDi~t~--sK~l~-----~G~pig~v~~~~~i~~~~~~~~-------- 313 (451)
T PRK06918 253 GILFVADEIQ----TGFARTGKYFAIEHFDVVPDLITV--SKSLG-----AGVPISGVIGRKEIMDESAPGE-------- 313 (451)
T ss_pred CCEEEEeccc----cCcCccCceehhHhcCCCCCEEee--ehhhc-----CCCccEEEEEcHHHHhccCCCC--------
Confidence 9999999974 3333332 234 787765 58774 4567899998887765542100
Q ss_pred CCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc---CCee--eccCCCceeeEEE
Q 001586 832 APEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFI 906 (1049)
Q Consensus 832 ~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~---~~v~--~~g~~g~~~~e~i 906 (1049)
..+. +.|+++.+.++.+.+..+..+++.+. .....+++.++|+++ +.+. ..|. |. +..+.
T Consensus 314 ------~~~T----~~g~~l~~aaa~a~l~~i~~~~~~~~---~~~~g~~l~~~l~~l~~~~~~~~~vrg~-G~-~~~~~ 378 (451)
T PRK06918 314 ------LGGT----YAGSPLGCAAALAVLDIIEKENLNDR---AIELGKVVMNRFEEMKNKYNCIGDVRGL-GA-MCAFE 378 (451)
T ss_pred ------cCcC----CCcCHHHHHHHHHHHHHHHHCCHHHH---HHHHHHHHHHHHHHHHhhCCCceeeccc-ee-EEEEE
Confidence 0011 22455666666777777755555543 334557777777664 2221 1222 32 21222
Q ss_pred EeccC-ccccCCCCHHHHHHHHHHCCcccCCC-CCCCCCEEEEEccCCCCHHHHHHHHHHHHHHHHHHHH
Q 001586 907 VDLRG-LKNTAGIEPEDVAKRLMDYGFHGPTM-SWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQ 974 (1049)
Q Consensus 907 v~~~~-~~~~~g~~~~~v~k~L~~~Gi~~~~~-~~p~~~~lri~~t~~~t~eeid~fv~aL~~i~~~i~~ 974 (1049)
+..+. .+.........+.+.+.++|+.+... .| ++++|++|+...++++||.++++|.+.++++.+
T Consensus 379 ~~~~~~~~~~~~~~~~~l~~~~~~~Gvlv~~~~~~--~~~lrl~p~l~~t~~~id~~l~~l~~~l~~~~~ 446 (451)
T PRK06918 379 LVQDRKTKEPDKTLTANICKEANKRGLLLLSAGTY--GNVIRVLMPLVITDEQLEEGLTIIEESLQACYE 446 (451)
T ss_pred EccCCCcCCCcHHHHHHHHHHHHHCCeEEeecCCC--CCEEEEECCCccCHHHHHHHHHHHHHHHHHHHH
Confidence 21010 00000112456777788999987432 22 378999999888999999999999999887654
No 423
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.53 E-value=4.9e-12 Score=149.37 Aligned_cols=292 Identities=18% Similarity=0.179 Sum_probs=181.0
Q ss_pred HHHHHHHHHHhhCCC--ccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEE-EcCCCCCccHHHHHhcC--------C
Q 001586 634 FNNLGEWLCTITGFD--SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCG--------M 702 (1049)
Q Consensus 634 i~el~~~la~l~G~~--~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VL-ip~saHg~~pa~a~~~G--------~ 702 (1049)
..++.+.|++++... ...++.+||+++++++++.+|.| . +|++|| ...+.||....+....| +
T Consensus 78 ~~~la~~l~~~~p~~~~~~v~f~~sGseA~e~AlklAr~~---t---gr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~ 151 (420)
T TIGR00700 78 YVALAEKLNRIAPGSGPKKSVFFNSGAEAVENAVKIARSY---T---GRPGVVAFDHGFHGRTNMTMALTAKVMPYKSGF 151 (420)
T ss_pred HHHHHHHHHHhCCCCCCCEEEEeCCcHHHHHHHHHHHHHh---c---CCCcEEEECCCcCCCcHHHHHhcCCCcccccCC
Confidence 346778888887421 23477889999999999998887 2 344555 78899998776544322 1
Q ss_pred -----EEEEEcCCCCCC-----------CCHHHHHHHHH--hcCCCeEEEEEEcC-Cccccccc---cHHHHHHHHHHcC
Q 001586 703 -----KIVSVGTDAKGN-----------INIEELRKAAE--ANRDNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNG 760 (1049)
Q Consensus 703 -----~Vv~V~~d~~g~-----------iD~~~L~~~i~--~~~~~taaV~it~P-n~~G~i~~---di~eI~~lah~~G 760 (1049)
.+..++.....+ -+++.+++.+. .+.+++++|+++.. ...|++.+ .+++|.++|++||
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g 231 (420)
T TIGR00700 152 GPFAPEVYRAPLPYPYRDGLLDKQLSTDGELAAARAIFVIDVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHG 231 (420)
T ss_pred CCCCCCcEEeCCCccccccccccchhHHHHHHHHHHHHHhhcCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcC
Confidence 233344321110 12567777763 34578999988754 34676642 3999999999999
Q ss_pred CEEEEeccccccccCcCCCC--------ccCCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCC
Q 001586 761 GQVYMDGANMNAQVGLTSPG--------YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPA 832 (1049)
Q Consensus 761 ~ll~vD~A~~~a~~gl~~Pg--------~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~ 832 (1049)
+++++|+++ .++.+.| ..-+|++++ .|.++ ||..+|++++++++++.+....
T Consensus 232 illI~DEV~----tg~gr~g~~~a~~~~~~~pDi~~l--sK~l~-----~G~pig~v~~~~~i~~~~~~~~--------- 291 (420)
T TIGR00700 232 IVFIADEVQ----TGFARTGAMFACEHEGPEPDLITT--AKSLA-----DGLPLSGVTGRAEIMDAPAPGG--------- 291 (420)
T ss_pred CEEEEEecc----cCCcccchhHHHhhcCCCCCEEEe--ecccc-----CCcceEEEEecHHHHhhcCCCC---------
Confidence 999999974 3443333 124788775 58774 4567899999888776542110
Q ss_pred CCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc---CCee--eccCCCceeeEEEE
Q 001586 833 PEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIV 907 (1049)
Q Consensus 833 ~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~---~~v~--~~g~~g~~~~e~iv 907 (1049)
+ .+ ++.|+++.++++.+.+..+..+++.+.. ....+++.++|+++ ++.+ ..+. |.. +.+
T Consensus 292 ~-----~~----T~~~~pl~~aaa~a~l~~l~~~~~~~~~---~~~g~~l~~~L~~l~~~~~~~~~vrg~-G~~---~~i 355 (420)
T TIGR00700 292 L-----GG----TYAGNPLACAAALAVLAIIESEGLIERA---RQIGRLVTDRLTTLKAVDPRIGDVRGL-GAM---IAV 355 (420)
T ss_pred c-----CC----CCCcCHHHHHHHHHHHHHHHhccHHHHH---HHHHHHHHHHHHHHHhhCCCEEEeecc-ceE---EEE
Confidence 0 01 1234556666777778777666665443 34456677777654 2221 1222 322 223
Q ss_pred eccCcc-c-cCCCCHHHHHHHHHHCCcccCCC-CCCCCCEEEEEccCCCCHHHHHHHHHHHHHHH
Q 001586 908 DLRGLK-N-TAGIEPEDVAKRLMDYGFHGPTM-SWPVPGTLMIEPTESESKEELDRYCDALISIR 969 (1049)
Q Consensus 908 ~~~~~~-~-~~g~~~~~v~k~L~~~Gi~~~~~-~~p~~~~lri~~t~~~t~eeid~fv~aL~~i~ 969 (1049)
.+..-. . ........+.+.+.++|+.+... .| .+++|++|....+++++++.++.|.+++
T Consensus 356 ~~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~p~~~f--~~~lRl~p~l~~~~~~l~~~~~~l~~~l 418 (420)
T TIGR00700 356 ELVDPGTTEPDAGLAERIATAAHAAGLLLLTCGMF--GNIIRFLPPLTIGDELLSEGLDILCAIL 418 (420)
T ss_pred EEecCCCCCccHHHHHHHHHHHHHCCeEEeccCCC--CCEEEEECCCCcCHHHHHHHHHHHHHHh
Confidence 221000 0 00011345666777899986432 23 3789999988888999999999998875
No 424
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=99.53 E-value=2e-12 Score=156.59 Aligned_cols=309 Identities=14% Similarity=0.102 Sum_probs=174.5
Q ss_pred hhcHHHHHHHHHHHHHHhh--CCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCEE
Q 001586 627 AQGYQEMFNNLGEWLCTIT--GFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKI 704 (1049)
Q Consensus 627 ~~G~~~~i~el~~~la~l~--G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~V 704 (1049)
.+|..++.+.+.+++.... +.+...+..++|++. +..++++.+. .++|+||++...+..+...+.+.|.++
T Consensus 184 ~~G~~~lReaia~~~~~~~~~~~~~~~I~it~G~~e--al~~~~~~l~-----~~Gd~Vli~~P~y~~y~~~~~~~g~~~ 256 (517)
T PRK13355 184 SKGLFSARKAIMQYAQLKGLPNVDVDDIYTGNGVSE--LINLSMSALL-----DDGDEVLIPSPDYPLWTACVNLAGGTA 256 (517)
T ss_pred CcChHHHHHHHHHHHHhcCCCCCChhHEEEeCcHHH--HHHHHHHHhC-----CCCCEEEEcCCCCcCHHHHHHHCCCEE
Confidence 3576555555555543332 344445555555541 2233333331 257899999988777777788999999
Q ss_pred EEEcCCCC--CCCCHHHHHHHHHhcCCCeEEEEEEcCC-cccccc--ccHHHHHHHHHHcCCEEEEeccccc-cccC--c
Q 001586 705 VSVGTDAK--GNINIEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMN-AQVG--L 776 (1049)
Q Consensus 705 v~V~~d~~--g~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~--~di~eI~~lah~~G~ll~vD~A~~~-a~~g--l 776 (1049)
+.++++++ +.+|+++|+++++ +++++|++++|| .+|.+- +.+++|+++|+++|+++++|+++.. ...+ .
T Consensus 257 v~~~~~~~~~~~~d~~~l~~~~~---~~~k~i~i~nP~NPTG~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~~~ 333 (517)
T PRK13355 257 VHYRCDEQSEWYPDIDDIRSKIT---SRTKAIVIINPNNPTGALYPREVLQQIVDIAREHQLIIFSDEIYDRLVMDGLEH 333 (517)
T ss_pred EEeecCcccCCCCCHHHHHHhcC---cCceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhhcCCCCCc
Confidence 99998754 5799999999997 789999999995 599775 2489999999999999999998631 1111 1
Q ss_pred CCCCccCCcE--E-EeCCCcccccCCCCCCCceeEEEEc--ccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHH
Q 001586 777 TSPGYIGADV--C-HLNLHKTFCIPHGGGGPGMGPIGVK--KHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSAL 851 (1049)
Q Consensus 777 ~~Pg~~GaDi--~-~~s~hK~f~~P~g~GGPg~G~i~~~--~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~ 851 (1049)
.+...+..|+ + +.++.|+|++| |.++|++++. +.+...+-... .. . .....+.+..++..
T Consensus 334 ~s~~~~~~~~~vi~~~S~SK~~~~~----G~RiG~~i~~~~~~~~~~~~~~l-~~--------~--~~~~~~~~~~~q~a 398 (517)
T PRK13355 334 TSIASLAPDLFCVTFSGLSKSHMIA----GYRIGWMILSGNKRIAKDYIEGL-NM--------L--ANMRLCSNVPAQSI 398 (517)
T ss_pred ccHHHhCCCCeEEEEecchhhccCc----ccceEEEEeeCchhhHHHHHHHH-HH--------H--hcCcCCcChHHHHH
Confidence 1112222342 2 35678887654 7899999864 22211100000 00 0 00001111111211
Q ss_pred HHHHHHHHHHHHchhhHHH---HHHHHHHHHHHHHHHHhccCCeeeccCCCceeeEEEEeccCccccCCCCHHHHH-HHH
Q 001586 852 ILPISYTYIAMMGSKGLTE---ASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVA-KRL 927 (1049)
Q Consensus 852 ~~~~a~a~l~~lG~eGl~~---~~~~~~~~a~yL~~~L~~~~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~-k~L 927 (1049)
+..+|. +.+.+.+ ..++..++.+++.+.|+++..+.+..+++.++ +.++++.-.. ...+..+++ +.|
T Consensus 399 ----~~~aL~--~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~g~fy--~~~~l~~~~~-~~~~~~~~~~~ll 469 (517)
T PRK13355 399 ----VQTALG--GHQSVKDYLVPGGRVYEQRELVYNALNAIPGISAVKPKAAFY--IFPKIDVKKF-NIHDDEQFALDLL 469 (517)
T ss_pred ----HHHHhc--CCccHHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCCeeeE--EEeecCcccC-CCCCHHHHHHHHH
Confidence 112221 1111111 12334556788888887642222222333332 2235431000 001233444 556
Q ss_pred HHCCcccC-CCCCC--CCCEEEEEccCCCCHHHHHHHHHHHHHHHHH
Q 001586 928 MDYGFHGP-TMSWP--VPGTLMIEPTESESKEELDRYCDALISIREE 971 (1049)
Q Consensus 928 ~~~Gi~~~-~~~~p--~~~~lri~~t~~~t~eeid~fv~aL~~i~~~ 971 (1049)
.++|+.+. ...|. ..+++||++. .+.++++..++.|.++++.
T Consensus 470 ~~~gV~v~pg~~F~~~~~~~~Ris~~--~~~~~l~~a~~rl~~~~~~ 514 (517)
T PRK13355 470 HDKKVLIVQGTGFNWDKPDHFRVVYL--PRLEDLEDAMDRLADFFSY 514 (517)
T ss_pred HhCCEEEeCcchhCCCCcCEEEEEeC--CCHHHHHHHHHHHHHHHHH
Confidence 78899853 33342 4689999995 5678888888887776643
No 425
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=99.53 E-value=1.8e-12 Score=149.84 Aligned_cols=283 Identities=12% Similarity=0.091 Sum_probs=169.2
Q ss_pred HHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCEEEEEcCCCC-C
Q 001586 635 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK-G 713 (1049)
Q Consensus 635 ~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~Vv~V~~d~~-g 713 (1049)
.++++.+++.+|.+...+..++|++. +...+++.+ . +++ ++++......+...+++.|.+++.+|.+++ +
T Consensus 58 ~~lr~~ia~~~~~~~~~i~it~Ga~~--~l~~~~~~l--~----~g~-viv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~ 128 (356)
T PRK08056 58 RHLHQALARHHQVPASWILAGNGETE--SIFAVVSGL--K----PRR-AMIVTPGFAEYRRALQQVGCEIRRYSLREADG 128 (356)
T ss_pred HHHHHHHHHHhCcChhhEEECCCHHH--HHHHHHHHh--C----CCC-EEEeCCCcHHHHHHHHHcCCeEEEEecccccC
Confidence 47788888889988766656566542 222333432 1 244 454443332333447889999999998643 3
Q ss_pred -CCCHHHHHHHHHhcCCCeEEEEEEcCC-cccccc--ccHHHHHHHHHHcCCEEEEeccccc-cccC--cCCC-CccCCc
Q 001586 714 -NINIEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMN-AQVG--LTSP-GYIGAD 785 (1049)
Q Consensus 714 -~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~--~di~eI~~lah~~G~ll~vD~A~~~-a~~g--l~~P-g~~GaD 785 (1049)
.+| +++.+.+. +++++|++++|+ .+|.+- +.+++|+++|+++|+++++|+++.. ...+ ...+ .....+
T Consensus 129 ~~~~-~~~~~~~~---~~~k~v~l~~p~NPTG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~ 204 (356)
T PRK08056 129 WQLT-DAILEALT---PDLDCLFLCTPNNPTGLLPERQLLQAIAERCKSLNIALILDEAFIDFIPDETGFIPQLADNPHL 204 (356)
T ss_pred CCcc-HHHHHhcc---CCCCEEEEeCCcCCCCCCCCHHHHHHHHHHHHhcCCEEEEecchhccCCcchHHHHHhccCCCE
Confidence 455 45556564 788999999995 599775 1288899999999999999998521 0001 0011 123456
Q ss_pred EEEeCCCcccccCCCCCCCceeEEEEc-ccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHc
Q 001586 786 VCHLNLHKTFCIPHGGGGPGMGPIGVK-KHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMG 864 (1049)
Q Consensus 786 i~~~s~hK~f~~P~g~GGPg~G~i~~~-~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG 864 (1049)
+++.|++|+|++| |.++|++++. +++...+-.. ....+++ .....++...+ -+
T Consensus 205 i~~~S~SK~~~~~----G~RiG~~v~~~~~~~~~l~~~--------------~~~~~~~------~~~~~~a~~~l--~~ 258 (356)
T PRK08056 205 WVLRSLTKFYAIP----GLRLGYLVNSDDAAVARMRRQ--------------QMPWSIN------AFAALAGEVIL--QD 258 (356)
T ss_pred EEEEechhhccCc----chhheeeecCCHHHHHHHHHh--------------CCCCchh------HHHHHHHHHHh--CC
Confidence 8889999999755 6789999874 3443332100 0001111 11111122222 12
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHHHCCcccCCC-CCC--C
Q 001586 865 SKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTM-SWP--V 941 (1049)
Q Consensus 865 ~eGl~~~~~~~~~~a~yL~~~L~~~~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~-~~p--~ 941 (1049)
.+-+++..+...++.+++.+.|+++..+....+.+.+ +.++++ .+..++++.|.++||.+... .|+ .
T Consensus 259 ~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~---~~~~~~-------~~~~~~~~~l~~~gI~v~~~~~f~~~~ 328 (356)
T PRK08056 259 RAYQQATWQWLAEEGARFYQALCALPLLTVWPGRANY---LFLRCE-------RPDIDLQRALLTQRILIRSCANYPGLD 328 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCcEEcCCCCcE---EEEEcC-------CChHHHHHHHHHCCeEEEECCCCCCCC
Confidence 2223344455567778888888764222111122222 445543 23568999999999986532 343 2
Q ss_pred CCEEEEEccCCCCHHHHHHHHHHHHHHH
Q 001586 942 PGTLMIEPTESESKEELDRYCDALISIR 969 (1049)
Q Consensus 942 ~~~lri~~t~~~t~eeid~fv~aL~~i~ 969 (1049)
.+++||++. +.++.++|+++|+++.
T Consensus 329 ~~~iRis~~---~~~~~~~l~~~l~~~~ 353 (356)
T PRK08056 329 SRYYRVAIR---SAAENERLLAALRNVL 353 (356)
T ss_pred CCEEEEEEc---CHHHHHHHHHHHHHHH
Confidence 468999984 6799999999998763
No 426
>PRK07683 aminotransferase A; Validated
Probab=99.53 E-value=2.1e-12 Score=150.97 Aligned_cols=300 Identities=15% Similarity=0.147 Sum_probs=179.0
Q ss_pred hcHHHHHHHHHHHHHHhhCC--Ccc-ccc-cCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCE
Q 001586 628 QGYQEMFNNLGEWLCTITGF--DSF-SLQ-PNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMK 703 (1049)
Q Consensus 628 ~G~~~~i~el~~~la~l~G~--~~~-~l~-~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~ 703 (1049)
+|..++..++.+++....|. +.. .+. .+++++|.. ++++... .++++|+++...+..+...+.+.|++
T Consensus 65 ~g~~~lr~~ia~~l~~~~g~~~~~~~~I~~t~G~~~al~---~~~~~l~-----~~gd~Vl~~~p~y~~~~~~~~~~g~~ 136 (387)
T PRK07683 65 AGLLELRKAACNFVKDKYDLHYSPESEIIVTIGASEAID---IAFRTIL-----EPGTEVILPAPIYPGYEPIIRLCGAK 136 (387)
T ss_pred CCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHH---HHHHHhC-----CCCCEEEEcCCCccchHHHHHHcCCE
Confidence 46556666666666555565 332 333 444454443 2333321 24688999887665566667889999
Q ss_pred EEEEcCCCC-CCCCHHHHHHHHHhcCCCeEEEEEEcCC-cccccc--ccHHHHHHHHHHcCCEEEEeccccccc-cCcCC
Q 001586 704 IVSVGTDAK-GNINIEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQ-VGLTS 778 (1049)
Q Consensus 704 Vv~V~~d~~-g~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~--~di~eI~~lah~~G~ll~vD~A~~~a~-~gl~~ 778 (1049)
++.++.+.+ ..+|+++++++++ +++++|++.+|+ .+|.+- .++++|+++|+++|+++++|+++..-. ..-..
T Consensus 137 ~~~~~~~~~~~~~~~~~l~~~~~---~~~~~i~i~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~ 213 (387)
T PRK07683 137 PVFIDTRSTGFRLTAEALENAIT---EKTRCVVLPYPSNPTGVTLSKEELQDIADVLKDKNIFVLSDEIYSELVYEQPHT 213 (387)
T ss_pred EEEeecCcccCCCCHHHHHHhcC---cCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecccccceeCCCcC
Confidence 999998755 4679999999986 678899999995 699873 259999999999999999999864211 11000
Q ss_pred C-----CccCCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHH
Q 001586 779 P-----GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALIL 853 (1049)
Q Consensus 779 P-----g~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~ 853 (1049)
+ +..+-.+++.++.|.|++| |-++|++++++++...+-.. ......+.+...+.
T Consensus 214 ~~~~~~~~~~~vi~~~s~SK~~~~p----GlRiG~i~~~~~l~~~~~~~--------------~~~~~~~~~~~~q~--- 272 (387)
T PRK07683 214 SIAHFPEMREKTIVINGLSKSHSMT----GWRIGFLFAPSYLAKHILKV--------------HQYNVTCASSISQY--- 272 (387)
T ss_pred ChhhccCCcCCeEEEeeccccccCc----cceeEEEEcCHHHHHHHHHH--------------HHhccCCCChHHHH---
Confidence 1 1112346677888988655 67799999987765543210 00011111111111
Q ss_pred HHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHH-HHHCCc
Q 001586 854 PISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKR-LMDYGF 932 (1049)
Q Consensus 854 ~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~-L~~~Gi 932 (1049)
++...+. .|..-+++..+...++.+++.+.|++. .+.+..+.+.++ +++.++. .+.+..++++. |.++||
T Consensus 273 -~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~--~~~~~~~----~~~~~~~~~~~ll~~~gI 343 (387)
T PRK07683 273 -AALEALT-AGKDDAKMMRHQYKKRRDYVYNRLISM-GLDVEKPTGAFY--LFPSIGH----FTMSSFDFALDLVEEAGL 343 (387)
T ss_pred -HHHHHHh-CChHHHHHHHHHHHHHHHHHHHHHHHc-CCcccCCCeeEE--EEEeccc----CCCCHHHHHHHHHHhCCE
Confidence 1222222 232323444455566778888888764 222212223222 3334331 12456677766 567899
Q ss_pred ccCC-CCC-C-CCCEEEEEccCCCCHHHHHHHHHHHHHHHH
Q 001586 933 HGPT-MSW-P-VPGTLMIEPTESESKEELDRYCDALISIRE 970 (1049)
Q Consensus 933 ~~~~-~~~-p-~~~~lri~~t~~~t~eeid~fv~aL~~i~~ 970 (1049)
.+.. ..| + ..+++||++.. +++++...++.|.++++
T Consensus 344 ~v~pg~~f~~~~~~~~Ri~~~~--~~~~~~~al~~l~~~l~ 382 (387)
T PRK07683 344 AVVPGSAFSEYGEGYVRLSYAY--SIETLKEGLDRLEAFLQ 382 (387)
T ss_pred EEcCchhhCCCCCCeEEEEecC--CHHHHHHHHHHHHHHHH
Confidence 8643 223 2 25899999974 57777777777776553
No 427
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=99.53 E-value=2.2e-12 Score=149.93 Aligned_cols=282 Identities=17% Similarity=0.186 Sum_probs=173.8
Q ss_pred HHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCEEEEEcCCCCCCC
Q 001586 636 NLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNI 715 (1049)
Q Consensus 636 el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~Vv~V~~d~~g~i 715 (1049)
++++.+++.+|.+...+..++|++. +..++++.+. .++++|+++...++.+...++..|++++.++.++++.+
T Consensus 75 ~lr~~ia~~~~~~~~~i~~t~G~~~--~l~~~~~~~~-----~~gd~vli~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~ 147 (371)
T PRK05166 75 ALREAIAARTGVPADRIILGNGSED--LIAVICRAVL-----RPGDRVVTLYPSFPLHEDYPTMMGARVERVTVTPDLGF 147 (371)
T ss_pred HHHHHHHHHhCcCHHHEEEcCCHHH--HHHHHHHHhc-----CCCCEEEEcCCChHHHHHHHHHcCCeEEEeecCCCCCC
Confidence 5778888889987655666666542 2222333321 25688998876555455567889999999999888889
Q ss_pred CHHHHHHHHHhcCCCeEEEEEEcCC-ccccccccHHHHHHHHHH--cCCEEEEeccccccccCcCCCC------ccCC-c
Q 001586 716 NIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHD--NGGQVYMDGANMNAQVGLTSPG------YIGA-D 785 (1049)
Q Consensus 716 D~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~~di~eI~~lah~--~G~ll~vD~A~~~a~~gl~~Pg------~~Ga-D 785 (1049)
|+++++++++ +++++|++++|+ .+|.+- +.+++.++++. .++++++|+++..-..+-..|. +.+. -
T Consensus 148 ~~~~l~~~~~---~~~~~v~l~~p~NPtG~~~-~~~~~~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~v 223 (371)
T PRK05166 148 DLDALCAAVA---RAPRMLMFSNPSNPVGSWL-TADQLARVLDATPPETLIVVDEAYAEYAAGDDYPSALTLLKARGLPW 223 (371)
T ss_pred CHHHHHHhhh---cCCCEEEEeCCCCCCCCCC-CHHHHHHHHHhCCCCcEEEEECcHHHhcCCcCcccHHHHHhhcCCCE
Confidence 9999999997 677889999995 599886 56666555553 4789999998531111101111 1111 2
Q ss_pred EEEeCCCcccccCCCCCCCceeEEEEc-ccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHc
Q 001586 786 VCHLNLHKTFCIPHGGGGPGMGPIGVK-KHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMG 864 (1049)
Q Consensus 786 i~~~s~hK~f~~P~g~GGPg~G~i~~~-~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG 864 (1049)
|+..|+.|.|++ .|.++|++++. +.+.+.+-. . +...++++ ..+. ++.+.+. .
T Consensus 224 i~i~SfSK~~~l----~GlRiG~~i~~~~~l~~~~~~-~-------------~~~~~~~~--~~q~----~~~~~l~--~ 277 (371)
T PRK05166 224 IVLRTFSKAYGL----AGLRVGYGLVSDPELVGLLDR-V-------------RTPFNVNG--AAQA----AALAALD--D 277 (371)
T ss_pred EEEeechHhhhc----chhheeeeecCCHHHHHHHHH-h-------------ccCCCCCH--HHHH----HHHHHhc--C
Confidence 566677787754 47889997764 444443210 0 00111221 1111 1111111 2
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHHHCCcccCCCC-CCCC
Q 001586 865 SKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMS-WPVP 942 (1049)
Q Consensus 865 ~eGl~~~~~~~~~~a~yL~~~L~~~-~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~-~p~~ 942 (1049)
.+-+++..+....+.+++.+.|++. +.+ . .+.+.+ +.++++ .+..++.+.|.++||.+.... +...
T Consensus 278 ~~~~~~~~~~~~~~r~~l~~~L~~~g~~~-~-p~~g~f---l~~~~~-------~~~~~l~~~l~~~gi~v~p~~~~~~~ 345 (371)
T PRK05166 278 EEHLAKGVALALAERERLKKELAEMGYRI-A-PSRANF---LFFDAR-------RPASAVAEALLRQGVIVKPWKQPGFE 345 (371)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCcCee-C-CCcCCE---EEEeCC-------CCHHHHHHHHHHCCeEEecCCCCCCC
Confidence 2234444455556677888888875 332 2 222322 345543 356789999999999865332 2246
Q ss_pred CEEEEEccCCCCHHHHHHHHHHHHHHH
Q 001586 943 GTLMIEPTESESKEELDRYCDALISIR 969 (1049)
Q Consensus 943 ~~lri~~t~~~t~eeid~fv~aL~~i~ 969 (1049)
+++||+++ +.++.++|+++|+.+.
T Consensus 346 ~~iRi~~~---~~~~~~~l~~~l~~i~ 369 (371)
T PRK05166 346 TFIRVSIG---SPEENDHFVAALDKVL 369 (371)
T ss_pred CeEEEEcC---CHHHHHHHHHHHHHHh
Confidence 89999996 5788999999998764
No 428
>PRK05939 hypothetical protein; Provisional
Probab=99.52 E-value=2.5e-12 Score=150.30 Aligned_cols=142 Identities=16% Similarity=0.185 Sum_probs=115.2
Q ss_pred HHHHHHHHHHHhCCCCcceEeccchHHHHHHHHHHhhhccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCcc---
Q 001586 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK--- 289 (1049)
Q Consensus 213 l~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a~~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~~~--- 289 (1049)
..++++.+|+|.|.+. +.++.+|++++.++++++ .. +||+||+++..|+++...+.. ++..|++++++|..
T Consensus 49 ~~~lE~~la~leg~~~--~v~~ssG~~Ai~~~l~al-l~--~Gd~Vv~~~~~y~~t~~~~~~-l~~~G~~v~~v~~~d~e 122 (397)
T PRK05939 49 TAALEAKITKMEGGVG--TVCFATGMAAIAAVFLTL-LR--AGDHLVSSQFLFGNTNSLFGT-LRGLGVEVTMVDATDVQ 122 (397)
T ss_pred HHHHHHHHHHHhCCCe--EEEeCCHHHHHHHHHHHH-cC--CCCEEEECCCccccHHHHHHH-HHhcCCEEEEECCCCHH
Confidence 4456789999999876 567778888888777665 33 899999999999988877755 45689999998864
Q ss_pred hhhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccc
Q 001586 290 DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGV 361 (1049)
Q Consensus 290 ~l~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~p~~~GaDivvgs~-k~lg~ 361 (1049)
++++ ++++|++|++++| |++|.+.|+++|+++||++|++++|+. .++.+....|.++|+||+++|. |.|++
T Consensus 123 ~l~~~l~~~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~-t~a~~~~~~~~~~gaDivv~S~sK~~~g 196 (397)
T PRK05939 123 NVAAAIRPNTRMVFVETIANPGTQVADLAGIGALCRERGLLYVVDN-TMTSPWLFRPKDVGASLVINSLSKYIAG 196 (397)
T ss_pred HHHHhCCCCCeEEEEECCCCCCCCHHhHHHHHHHHHHcCCEEEEEC-CcccccccCccccCCEEEEecCeecccC
Confidence 4555 7889999999987 799999999999999999999999953 4444555567889999999998 77764
No 429
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.52 E-value=2.1e-12 Score=149.76 Aligned_cols=210 Identities=18% Similarity=0.118 Sum_probs=147.4
Q ss_pred HHHHHHHHHHHhCCCCcceEeccchHHHHHHHHHHhhhccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCcchhh
Q 001586 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKDID 292 (1049)
Q Consensus 213 l~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a~~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~~~~l~ 292 (1049)
..++++.++++.|.+. +..+.+||+|+.++++++ .. +||+||++...+..+...+...+..+|++++++|+++.+
T Consensus 66 ~~~lE~~la~leg~~~--av~~sSG~aAi~~al~al-l~--~GD~Vl~~~~~yg~t~~~~~~~~~~~Gi~v~fvd~~~~~ 140 (384)
T PRK06434 66 VQAFEEKYAVLENAEH--ALSFSSGMGAITSAILSL-IK--KGKRILSISDLYGQTFYFFNKVLKTLGIHVDYIDTDRLN 140 (384)
T ss_pred HHHHHHHHHHHhCCCc--EEEeCCHHHHHHHHHHHH-hC--CCCEEEEecCccchHHHHHHHHHHhcCcEEEEECCCChh
Confidence 3457789999999875 678899999888877765 33 899999998888777776656567789999999987544
Q ss_pred c--cCC-CEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccccCCCCC
Q 001586 293 Y--KSG-DVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGG 367 (1049)
Q Consensus 293 ~--l~~-~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~p~~~GaDivvgs~-k~lg~P~~~GG 367 (1049)
. +++ ++++|+++.| |.++.+.|+++|+++||++| ++|+ ..++.+....|-.+|+|++++|+ |.+++|-..
T Consensus 141 ~~~l~~~~tklv~~e~~snpt~~v~Di~~I~~la~~~~--lvVD-~t~~s~~~~~pl~~gaDivv~S~tK~i~G~~d~-- 215 (384)
T PRK06434 141 SLDFDPSNYDLIYAESITNPTLKVPDIKNVSSFCHEND--VIVD-ATFASPYNQNPLDLGADVVIHSATKYISGHSDV-- 215 (384)
T ss_pred heeecCCCeeEEEEEcCCCCCceeecHHHHHHHHHHcC--eEEE-CCCCCcccCCchhcCCCEEEeecccccCCCCCc--
Confidence 3 555 7999999987 78999999999999999998 4564 34555566677889999999999 777543211
Q ss_pred CceEEEEEch-hHHhcCCCceeeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcchHHHH
Q 001586 368 PHAAFLATSQ-EYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTI 446 (1049)
Q Consensus 368 P~~G~l~~~~-~l~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irrekaTsni~t~~~l~a~~aa~y~~~~g~~Gl~~i 446 (1049)
-+|.+.+++ ++..++- ..|+.-|. +. .+ ..|+ +...|-+-|..+
T Consensus 216 -~gG~vv~~~~~~~~~~~-------------------------~~~~~~G~-~~---~~---~~A~--l~~~gL~tL~~R 260 (384)
T PRK06434 216 -VMGVAGTNNKSIFNNLV-------------------------ERRKTLGS-NP---DP---IQAY--LALRGLKTLGLR 260 (384)
T ss_pred -eEEEEecCcHHHHHHHH-------------------------HHHHhcCC-CC---CH---HHHH--HHHhCCCcHHHH
Confidence 146666643 3322220 00111110 00 11 1222 244555667777
Q ss_pred HHHHHHHHHHHHHHhhcCCCe
Q 001586 447 AQRVHGLAGTFALGLKKLGTV 467 (1049)
Q Consensus 447 a~~~~~~a~~l~~~L~~~g~~ 467 (1049)
.++..+++..+++.|+++..+
T Consensus 261 ~~r~~~~a~~~a~~L~~~p~v 281 (384)
T PRK06434 261 MEKHNKNGMELARFLRDSKKI 281 (384)
T ss_pred HHHHHHHHHHHHHHHHcCCCc
Confidence 788889999999999987534
No 430
>PRK06460 hypothetical protein; Provisional
Probab=99.52 E-value=6e-13 Score=154.61 Aligned_cols=282 Identities=16% Similarity=0.187 Sum_probs=173.5
Q ss_pred HHHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCC-ccH---HHHHhcCCEEEEEcC
Q 001586 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHG-TNP---ATAAMCGMKIVSVGT 709 (1049)
Q Consensus 634 i~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg-~~p---a~a~~~G~~Vv~V~~ 709 (1049)
..++++.++++.|.+.. +..++|.++...++.+ +. +++++||++.+.++ ++. ..++..|++++.++.
T Consensus 47 ~~~L~~~lA~l~g~~~~-v~~~sG~~ai~~~l~a---l~-----~~Gd~Vl~~~~~~~~ty~~~~~~~~~~G~~v~~~~~ 117 (376)
T PRK06460 47 VLELTKKIVELENAEMG-VAFSSGMGAISTTALA---LL-----KPGNSVLVHRDMFGRSYRFFTDYLKNWGVNVDASNP 117 (376)
T ss_pred HHHHHHHHHHHhCCCcE-EEeCCHHHHHHHHHHH---Hh-----CCCCEEEEecCCcCcHHHHHHHHHHhhCcEEEEECC
Confidence 45788999999998764 4456676655433333 21 25688998865543 322 336678999998886
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-ccccccccHHHHHHHHHHcCCEEEEeccccccccCcCCCCccCCcEEE
Q 001586 710 DAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1049)
Q Consensus 710 d~~g~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~Pg~~GaDi~~ 788 (1049)
+ |.+.+++.++ +++++|++++|+ .+|.+. |+++|+++||++|+++++|+++... ....|-+.++|+++
T Consensus 118 ~-----~~~~l~~~~~---~~tklV~l~sp~NPtG~v~-d~~~I~~la~~~g~~vivDea~~~~--~~~~~l~~~~divv 186 (376)
T PRK06460 118 G-----SDNIIEKAKS---KRYDVVFVENITNPLLRVV-DITELSKVCKENGSILIVDATFSTP--INQKPLELGADIVV 186 (376)
T ss_pred C-----CHHHHHHhcC---CCceEEEEECCCCCCCccc-CHHHHHHHHHHcCCEEEEECCcCcc--ccCChhhcCCCEEE
Confidence 4 2344555444 789999999995 699887 7999999999999999999986422 12344457899999
Q ss_pred eCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhH
Q 001586 789 LNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGL 868 (1049)
Q Consensus 789 ~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl 868 (1049)
.+++|+|+ |.++..+|+++.++++.+.+.. . + ... +++.++ . .+|+...|.+-+
T Consensus 187 ~S~sK~l~---G~~~~~~G~~~~~~~l~~~l~~--~----------~-~~~-g~~~~~-------~--~a~~~l~~~~~l 240 (376)
T PRK06460 187 HSASKFLA---GHNDVIAGLAAGYGKLLNVIDQ--M----------R-RTL-GTSLDP-------H--AAYLTLRGIKTL 240 (376)
T ss_pred eecceecc---CCCCceEEEEecCHHHHHHHHH--H----------H-Hhc-CCCCCH-------H--HHHHHHhchhhH
Confidence 99999984 2233457888887766544310 0 0 001 111111 1 233444466677
Q ss_pred HHHHHHHHHHHHHHHHHHhccCC---eeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEE
Q 001586 869 TEASKIAILNANYMAKRLEKHYP---ILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTL 945 (1049)
Q Consensus 869 ~~~~~~~~~~a~yL~~~L~~~~~---v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~p~~~~l 945 (1049)
..+.++..+++.++++.|+++.. |.|++- + ..+..+++++.. .|+ ++.
T Consensus 241 ~~r~~~~~~n~~~l~~~L~~~p~v~~v~yp~l------------~------~~p~~~~~~~~~-~g~---------gg~- 291 (376)
T PRK06460 241 KIRMDVINRNAEQIAEFLEGHPKVVKVYYPGL------------K------SHVDYEIARRVL-KGF---------GGV- 291 (376)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCccEEECCCC------------C------CCccHHHHHhhC-CCC---------ceE-
Confidence 77888888999999999997622 333221 0 123456666643 121 232
Q ss_pred EEEccCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCccccccch
Q 001586 946 MIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKVTCLFLHHGY 998 (1049)
Q Consensus 946 ri~~t~~~t~eeid~fv~aL~~i~~~i~~i~~g~~~~~~~~l~~~ph~~~~~~ 998 (1049)
+++....+.+++.+|++.|+-+. ...++ | +.+.+...|.++.++.
T Consensus 292 -~s~~~~~~~~~~~~~~~~l~~~~-~~~s~--G----g~~sl~~~p~~~~~~~ 336 (376)
T PRK06460 292 -LSFEVNGGQESALKVMKSLKLII-PAQTL--G----GVNSVISHPATMSHRT 336 (376)
T ss_pred -EEEEEcCcHHHHHHHHHhCCcce-eccCC--C----CCceEEeCcccccccc
Confidence 33333335677788888776322 11111 2 4556666666555544
No 431
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.52 E-value=2.3e-13 Score=138.38 Aligned_cols=161 Identities=28% Similarity=0.381 Sum_probs=118.3
Q ss_pred HHHHHHHHHHhh--CCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccH-HHHHhcCCEEEEEcCC
Q 001586 634 FNNLGEWLCTIT--GFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNP-ATAAMCGMKIVSVGTD 710 (1049)
Q Consensus 634 i~el~~~la~l~--G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~p-a~a~~~G~~Vv~V~~d 710 (1049)
+.++++++++++ +.+.+.+.+ +|+.|...++++++ .++++|+++...|+.+. ..+...|++++.++.+
T Consensus 2 ~~~~~~~l~~~~~~~~~~~~~~~-~~t~a~~~~~~~~~--------~~~~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 72 (170)
T cd01494 2 LEELEEKLARLLQPGNDKAVFVP-SGTGANEAALLALL--------GPGDEVIVDANGHGSRYWVAAELAGAKPVPVPVD 72 (170)
T ss_pred HHHHHHHHHHHcCCCCCcEEEeC-CcHHHHHHHHHHhC--------CCCCEEEEeecccceehhhHHHhcCCEEEEeccC
Confidence 357899999999 555444444 66666655555543 13578999888888777 6788899999999987
Q ss_pred CCCCCCH--HHHHHHHHhcCCCeEEEEEEcCCc-cccccccHHHHHHHHHHcCCEEEEeccccccccCcC--CCCccCCc
Q 001586 711 AKGNINI--EELRKAAEANRDNLSTLMVTYPST-HGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT--SPGYIGAD 785 (1049)
Q Consensus 711 ~~g~iD~--~~L~~~i~~~~~~taaV~it~Pn~-~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~--~Pg~~GaD 785 (1049)
.++..+. +++++... .++++++++++|++ .|... |+++|+++||++|+++++|+++........ .+...++|
T Consensus 73 ~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~g~~~-~~~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~d 149 (170)
T cd01494 73 DAGYGGLDVAILEELKA--KPNVALIVITPNTTSGGVLV-PLKEIRKIAKEYGILLLVDAASAGGASPAPGVLIPEGGAD 149 (170)
T ss_pred CCCccchhhhhhhhccc--cCceEEEEEecCcCCCCeEc-CHHHHHHHHHHcCCEEEEecccccccccccccccccccCC
Confidence 6654433 35544432 37899999999964 77776 789999999999999999998653222210 23456899
Q ss_pred EEEeCCCcccccCCCCCCCceeEEEEc
Q 001586 786 VCHLNLHKTFCIPHGGGGPGMGPIGVK 812 (1049)
Q Consensus 786 i~~~s~hK~f~~P~g~GGPg~G~i~~~ 812 (1049)
+++.|+||+| |+||+|++++|
T Consensus 150 ~~~~s~~K~~------~~~~~G~l~~~ 170 (170)
T cd01494 150 VVTFSLHKNL------GGEGGGVVIVK 170 (170)
T ss_pred EEEEEccccc------CCCceEEEEeC
Confidence 9999999998 45999999875
No 432
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.52 E-value=1.2e-12 Score=155.70 Aligned_cols=285 Identities=12% Similarity=0.010 Sum_probs=175.9
Q ss_pred HHHHHHHHhCCCCcceEe---ccchHHHHHHHHHHhhhccCCCCEEEEcC------CCCHHHHHHHHHhhcCCCeEEEE-
Q 001586 216 FQTMIADLTGLPMSNASL---LDEGTAAAEAMAMCNNIQKGKKKTFIIAS------NCHPQTIDICITRADGFDIKVVV- 285 (1049)
Q Consensus 216 ~q~~ia~L~G~~~~n~sl---~~~~Ta~~eA~~~a~~~~~~~g~~Vlv~~------~~Hps~~~~l~~~a~~~gi~v~~- 285 (1049)
+++..++++|.+.+...+ ..+|+.+..++.+++. ++||+|++.+ ..|.+.....+ ....++.+..
T Consensus 85 ~~~~~~~~f~~~~~~~~~nv~~~SG~~AN~av~~aL~---~pgD~Il~~d~~~gGhl~H~~~~~g~~--~s~~~~~~~~~ 159 (475)
T PLN03226 85 CQKRALEAFRLDPEKWGVNVQPLSGSPANFAVYTALL---QPHDRIMGLDLPHGGHLSHGYQTDGKK--ISATSIYFESM 159 (475)
T ss_pred HHHHHHHHhCCCcceeEEecCcCchHHHHHHHHHHhC---CCCCEEEECCCCcCcchhhhhhhcccc--cccceEEEEee
Confidence 346788888987644322 2577878888887763 3899999855 33443332221 1112222111
Q ss_pred ----------eCcchhhc-cC-CCEeEEEEEcCCCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCC-----CCCccc
Q 001586 286 ----------SDLKDIDY-KS-GDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-----PPGELG 348 (1049)
Q Consensus 286 ----------v~~~~l~~-l~-~~t~~V~v~~pn~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~-----~p~~~G 348 (1049)
+|+++|++ +. .+++.|++.. +.+|...|+++|.++||++|++++|+. .++.|++. .|-+ +
T Consensus 160 ~y~~~~~~g~iD~d~Le~~l~~~~pklIv~~~-S~~s~~~D~a~i~~ia~~~ga~LlvD~-AH~~Gli~~~~~~~p~~-~ 236 (475)
T PLN03226 160 PYRLDESTGLIDYDKLEKKAMLFRPKLIIAGA-SAYPRDWDYARMRKIADKVGALLMCDM-AHISGLVAAQEAASPFE-Y 236 (475)
T ss_pred eeeecCCCCCcCHHHHHHHHhhcCCeEEEEec-CcCCCccCHHHHHHHHHHcCCEEEEEc-hhhhCcccCCCCCCCCC-C
Confidence 25566766 43 3566555543 457888999999999999999999942 33444432 2222 7
Q ss_pred ceEEEecC-ccccccCCCCCCceEEEEEchhHHhcCCCceeeeeecCCCCcceeeecccccccccccccCCCccchhHHH
Q 001586 349 ADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALL 427 (1049)
Q Consensus 349 aDivvgs~-k~lg~P~~~GGP~~G~l~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irrekaTsni~t~~~l~ 427 (1049)
+|++++++ |+|++| ..|++++++++.+.+.+. .+...| |....+ +.... ...++.+ ...+.
T Consensus 237 ~Div~~t~hK~L~GP------~Gg~I~~~~~~~~~~~~g-~~~~~d------~~~~i~-~a~~~-~~~g~p~---~~~ia 298 (475)
T PLN03226 237 CDVVTTTTHKSLRGP------RGGMIFFRKGPKPPKGQG-EGAVYD------YEDKIN-FAVFP-GLQGGPH---NHTIA 298 (475)
T ss_pred CeEEEecCcccccCC------CceEEEEchhhcccccCC-CccHHH------HHHHhc-cccCC-ccCCCch---HHHHH
Confidence 99999998 777544 447889988765433221 110000 100000 00000 0122233 24455
Q ss_pred HHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEcCC-CCcceEEEecC--C--HHHHHHHHHHcCCeeee-
Q 001586 428 ANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL-PFFDTVKVKCA--D--AHAIASAAYKIEMNLRV- 501 (1049)
Q Consensus 428 a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~g~~~v~~~-~~~~~v~i~~~--~--~~~v~~~L~~~gI~~~~- 501 (1049)
++.+++ .++...|.+++++++.+++++|++.|.+.| ++++.. ...+.+.|.+. + ..++.+.|.+.||.+..
T Consensus 299 al~aAl--~~i~~~~~~~~~~~~~~na~~L~~~L~~~G-~~l~~~~t~~hi~lv~~~~~gi~~~~~~~~L~~~~I~~nk~ 375 (475)
T PLN03226 299 ALAVAL--KQAMTPEFKAYQKQVKANAAALANRLMSKG-YKLVTGGTDNHLVLWDLRPLGLTGSRVEKVLDLAHITLNKN 375 (475)
T ss_pred HHHHHH--HHHhCcCHHHHHHHHHHHHHHHHHHHHhCC-CEEEcCCCCCCEEEEEccCCCCCHHHHHHHHHHCCCEECCC
Confidence 555555 566667889999999999999999999987 998853 22234444442 2 67888899999997643
Q ss_pred --------ecCCeEEE----EeccCCCHHHHHHHHHHHhC
Q 001586 502 --------VDSNTVTA----SFDETTTLEDVDKLFIVFAG 529 (1049)
Q Consensus 502 --------~~~~~vri----s~~~~~t~edid~lv~aL~~ 529 (1049)
+.+..||+ -.+...+++|++++++.|..
T Consensus 376 ~~p~~~~~~~~~giRiGt~~lt~~g~~~~d~~~ia~~i~~ 415 (475)
T PLN03226 376 AVPGDSSALVPGGVRIGTPAMTSRGLVEKDFEKVAEFLHR 415 (475)
T ss_pred CCCCCcccCCCCCcccCcHHHHHCCCCHHHHHHHHHHHHH
Confidence 23467888 45567788999999999853
No 433
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.52 E-value=5.7e-12 Score=145.23 Aligned_cols=268 Identities=15% Similarity=0.128 Sum_probs=177.6
Q ss_pred HHHHHHHHHhCCCCcceEeccchHHHHHHHHHHhhhccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCcch----
Q 001586 215 NFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKD---- 290 (1049)
Q Consensus 215 e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a~~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~~~~---- 290 (1049)
++++.+|++++.++.++.++.|++.+...+..++. . +||+|++++-.|+.+...+ +..|++++.++.++
T Consensus 64 ~lr~aia~~~~~~~~~I~it~G~~~al~~~~~~l~-~--~gd~vlv~~P~y~~~~~~~----~~~g~~~~~v~~~~~~~~ 136 (353)
T PRK05387 64 ALRQAIAAYYGLDPEQVFVGNGSDEVLAHAFLAFF-N--HDRPLLFPDITYSFYPVYA----GLYGIPYEEIPLDDDFSI 136 (353)
T ss_pred HHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHhc-C--CCCEEEEeCCCHHHHHHHH----HHcCCEEEEeecCCCCCC
Confidence 67789999999999999999999977666555442 3 8899999999987766554 34688888877642
Q ss_pred -hhccCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhC-CcEEEEEeccccccC---CCCCCcccceEEEecC-ccccccC
Q 001586 291 -IDYKSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHAN-GVKVVMATDLLALTI---LKPPGELGADIVVGSA-QRFGVPM 363 (1049)
Q Consensus 291 -l~~l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~-galliV~a~~~alg~---l~~p~~~GaDivvgs~-k~lg~P~ 363 (1049)
++++...+++|++.+| |++|.+.+.+++.++++.+ |++++++.....++. +.......-.|+++|. |.|+.|
T Consensus 137 d~~~l~~~~~~v~~~~P~NPtG~~~~~~~~~~l~~~~~~~~livDe~y~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~- 215 (353)
T PRK05387 137 DVEDYLRPNGGIIFPNPNAPTGIALPLAEIERILAANPDSVVVIDEAYVDFGGESAIPLIDRYPNLLVVQTFSKSRSLA- 215 (353)
T ss_pred CHHHHHhcCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCcEEEEeCcccccCCcchHHHHhhCCCEEEEEehhHhhcch-
Confidence 2333345678888888 7899999999999999876 888888531111211 0001123446888886 888654
Q ss_pred CCCCCceEEEEEchhHHhcCCCceeeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcchH
Q 001586 364 GYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGL 443 (1049)
Q Consensus 364 ~~GGP~~G~l~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irrekaTsni~t~~~l~a~~aa~y~~~~g~~Gl 443 (1049)
|-..||+++.+++++.+. +.+...+..+.+.+ +..++. ..+...+.+
T Consensus 216 ---GlR~G~~~~~~~~~~~l~----------------------------~~~~~~~~~~~~~~-~q~~~~-~~l~~~~~~ 262 (353)
T PRK05387 216 ---GLRVGFAIGHPELIEALN----------------------------RVKNSFNSYPLDRL-AQAGAI-AAIEDEAYF 262 (353)
T ss_pred ---hhhceeeecCHHHHHHHH----------------------------HhhccCCCCCcCHH-HHHHHH-HHhcCHHHH
Confidence 345789888777765541 00100011011111 111111 112223446
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCeEEcCCCCcceEEEecCC--HHHHHHHHHHcCCeeeeec----CCeEEEEeccCCCH
Q 001586 444 KTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD--AHAIASAAYKIEMNLRVVD----SNTVTASFDETTTL 517 (1049)
Q Consensus 444 ~~ia~~~~~~a~~l~~~L~~~g~~~v~~~~~~~~v~i~~~~--~~~v~~~L~~~gI~~~~~~----~~~vris~~~~~t~ 517 (1049)
++..++..++.+++.+.|+++| +++.+.. ..-+.+..++ ..++.+.|.++||.++... .+.+|++++ +.
T Consensus 263 ~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~iRis~~---~~ 337 (353)
T PRK05387 263 EETRAKVIATRERLVEELEALG-FEVLPSK-ANFVFARHPSHDAAELAAKLRERGIIVRHFNKPRIDQFLRITIG---TD 337 (353)
T ss_pred HHHHHHHHHHHHHHHHHHHHCC-CeECCCc-CcEEEEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCeEEEEeC---CH
Confidence 7788888888999999999887 8765321 1123445443 6789999999999886542 368999987 67
Q ss_pred HHHHHHHHHHh
Q 001586 518 EDVDKLFIVFA 528 (1049)
Q Consensus 518 edid~lv~aL~ 528 (1049)
+++++++++|.
T Consensus 338 ~~~~~~~~~L~ 348 (353)
T PRK05387 338 EEMEALVDALK 348 (353)
T ss_pred HHHHHHHHHHH
Confidence 99999999986
No 434
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.52 E-value=2.5e-12 Score=151.49 Aligned_cols=142 Identities=24% Similarity=0.224 Sum_probs=117.2
Q ss_pred HHHHHHHHHHhCCCCcceEeccchHHHHHHHHHHhhhccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCcc---h
Q 001586 214 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK---D 290 (1049)
Q Consensus 214 ~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a~~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~~~---~ 290 (1049)
.++++.+|++.|.+. +.++.+|++++.++++++. . +||+||++...|+.+...+...++..|++++.+|.+ +
T Consensus 60 ~~le~~lA~l~g~~~--~v~~~sG~~Ai~~al~~l~-~--~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~v~~~d~~~ 134 (418)
T TIGR01326 60 DVLEQRIAALEGGVA--ALAVASGQAAITYAILNLA-Q--AGDNIVSSSYLYGGTYNLFKHTLKRLGIEVRFVDPDDPEE 134 (418)
T ss_pred HHHHHHHHHHhCCCe--EEEEccHHHHHHHHHHHHh-C--CCCEEEEECCCcHHHHHHHHHHHHHcCcEEEEECCCCHHH
Confidence 467789999999754 6788999988887776542 3 789999999999988888777677889999998864 4
Q ss_pred hhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccceEEEecC-ccccc
Q 001586 291 IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGV 361 (1049)
Q Consensus 291 l~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~p~~~GaDivvgs~-k~lg~ 361 (1049)
+++ +++++++|++++| |++|.+.|+++|+++||++|++++|+ +.++.+....|.++|+||++.|. |.|++
T Consensus 135 l~~~l~~~t~~V~le~p~NPtg~v~dl~~I~~la~~~~i~livD-~t~~~~~~~~~l~~g~Divv~S~sK~l~g 207 (418)
T TIGR01326 135 FEKAIDENTKAVFAETIGNPAINVPDIEAIAEVAHAHGVPLIVD-NTFATPYLCRPIDHGADIVVHSATKYIGG 207 (418)
T ss_pred HHHhcCcCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEE-CCCchhhcCCchhcCCeEEEECccccccC
Confidence 455 7788999999988 78999999999999999999999994 45555555667788999999998 77753
No 435
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.51 E-value=4.9e-12 Score=143.98 Aligned_cols=300 Identities=19% Similarity=0.191 Sum_probs=189.0
Q ss_pred HHHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHH---HHhcCCEEEEEcCC
Q 001586 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT---AAMCGMKIVSVGTD 710 (1049)
Q Consensus 634 i~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~---a~~~G~~Vv~V~~d 710 (1049)
..++++.+++.+|...+ +..+||+.|...+|+++ +.+++|+||+|.- ++.+. ..+.|+++|+|++|
T Consensus 36 v~~FE~~~ae~~G~k~a-va~~sgT~AL~laL~al-------~ig~GDeVI~ps~---TfvATan~i~~~Ga~PVFvDid 104 (374)
T COG0399 36 VRRFEQAFAEYLGVKYA-VAVSSGTAALHLALLAL-------AIGPGDEVIVPSF---TFVATANAVLLVGAKPVFVDID 104 (374)
T ss_pred HHHHHHHHHHHhCCCeE-EEecChHHHHHHHHHhc-------CCCCCCEEEecCC---chHHHHHHHHHcCCeEEEEecC
Confidence 45888999999999875 45677776554444322 2357899999875 56665 45699999999999
Q ss_pred CC-CCCCHHHHHHHHHhcCCCeEEEEEEcCCccccccccHHHHHHHHHHcCCEEEEeccccccccCc-CCCCccCCcEEE
Q 001586 711 AK-GNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGL-TSPGYIGADVCH 788 (1049)
Q Consensus 711 ~~-g~iD~~~L~~~i~~~~~~taaV~it~Pn~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl-~~Pg~~GaDi~~ 788 (1049)
++ +++|++.||++|+ ++|++|+.. +.+|..- |+++|.++|++||++|+-|+|+..+..-- ...|.+| |+.+
T Consensus 105 ~~T~nid~~~ie~aIt---~~tKAIipV--hl~G~~~-dm~~i~~la~~~~l~vIEDaAqa~Ga~y~gk~vGt~G-d~~~ 177 (374)
T COG0399 105 PDTLNIDPDLIEAAIT---PRTKAIIPV--HLAGQPC-DMDAIMALAKRHGLPVIEDAAQAHGATYKGKKVGSFG-DIGA 177 (374)
T ss_pred CcccCCCHHHHHHHcc---cCCeEEEEe--hhccCCC-CHHHHHHHHHHcCCeEEEEcchhccCeecCccccccc-ceEE
Confidence 76 8999999999998 789999875 5778876 89999999999999999999975332111 2345554 6777
Q ss_pred eCCCcccccCCCCCCCceeEEEEcc-ccccc---CCCCccccCCCC-CCCCCCCCCCCCCccchhhHHHHHHHHHHHHHH
Q 001586 789 LNLHKTFCIPHGGGGPGMGPIGVKK-HLAPF---LPSHPVVSTGGI-PAPEKSQPLGTIAAAPWGSALILPISYTYIAMM 863 (1049)
Q Consensus 789 ~s~hK~f~~P~g~GGPg~G~i~~~~-~l~~~---lpg~~vg~t~~~-~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~l 863 (1049)
+|+|-+=.++.| -+|++.+++ ++.++ +..+ |...+. .++.... .+ ... .. .-..+++.++-|.
T Consensus 178 fSF~~~K~ittg----EGGav~tnd~ela~k~~~lr~h--G~~~~~~~~y~~~~-~G-~N~-rm-~~iqAAigl~QL~-- 245 (374)
T COG0399 178 FSFHATKNLTTG----EGGAVVTNDEELAEKARSLRNH--GLSRDAVFKYLHEE-LG-YNY-RL-TEIQAAIGLAQLE-- 245 (374)
T ss_pred EEecCCCCcccc----CceEEEeCCHHHHHHHHHHHHh--CcCCCccccceeee-cc-ccc-CH-HHHHHHHHHHHHH--
Confidence 776643322322 347788775 34433 2111 111100 0000000 00 000 00 1123333444443
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHhcc--CCeeeccCC-CceeeEEEEeccCccccCCCCHHHHHHHHHHCCccc----CC
Q 001586 864 GSKGLTEASKIAILNANYMAKRLEKH--YPILFRGVN-GTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHG----PT 936 (1049)
Q Consensus 864 G~eGl~~~~~~~~~~a~yL~~~L~~~--~~v~~~g~~-g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~~----~~ 936 (1049)
.+.+..++..+++++..+.|++. +.+...... ....|.+.+.++. .+.+-+.+.+.|.++||.. ..
T Consensus 246 ---~l~~~~~~R~~~a~~Y~~~l~~~~~~~~p~~~~~~~~~~~~~~i~~~~----~~~~R~~l~~~L~~~gi~~~~~~~P 318 (374)
T COG0399 246 ---RLDEINERRREIAQIYAEALKGLPGITLPPEPDGAVHAWHLYTILVDE----EGISRDALMESLKEAGVGAVVYFRP 318 (374)
T ss_pred ---HHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCceeeeeeeEEEecC----CCCCHHHHHHHHHhCCCCceEEeec
Confidence 34455555667788888888875 233222211 1335566666542 1466789999999997652 11
Q ss_pred C---------------CCCC-----CCEEEEEccCCCCHHHHHHHHHHHHHHHH
Q 001586 937 M---------------SWPV-----PGTLMIEPTESESKEELDRYCDALISIRE 970 (1049)
Q Consensus 937 ~---------------~~p~-----~~~lri~~t~~~t~eeid~fv~aL~~i~~ 970 (1049)
+ .+|. ...+.+-.....+.+|+++.+++|++++.
T Consensus 319 ~~~~~~~~~~~~~~~~~lp~ae~~~~r~l~LP~~p~l~~~~~~~V~~~l~~~~~ 372 (374)
T COG0399 319 LHLQPAYRQLGYFPEGDLPNAEDLSERILSLPLHPNLSEEDVDRVIEALKEVLG 372 (374)
T ss_pred cccchhhhcccccccCCCchHHHHhhCeEEccCCCCCCHHHHHHHHHHHHHHhc
Confidence 1 1121 24677777788899999999999998764
No 436
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.51 E-value=7.1e-13 Score=153.18 Aligned_cols=212 Identities=20% Similarity=0.220 Sum_probs=143.7
Q ss_pred HHHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHh----cCCEEEEEcC
Q 001586 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAM----CGMKIVSVGT 709 (1049)
Q Consensus 634 i~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~----~G~~Vv~V~~ 709 (1049)
..++++.++++.|.+.+ +..++|.++...++ ..+ +++|+||++...+|..+..... .++++..
T Consensus 56 ~~~le~~lA~leg~~~~-v~~~sG~aAi~~~l---~~l------~~GD~VI~~~~~yg~~~~~~~~~~~~~~~~~~~--- 122 (364)
T PRK07269 56 RAKLEETLAAIESADYA-LATSSGMSAIVLAF---SVF------PVGSKVVAVRDLYGGSFRWFNQQEKEGRFHFTY--- 122 (364)
T ss_pred HHHHHHHHHHHhCCCeE-EEeCCHHHHHHHHH---HHh------CCCCEEEEecCCcCchHHHHHHHHhcCcEEEEe---
Confidence 34788999999997764 55677776664333 221 2568899887776655543221 1232221
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-ccccccccHHHHHHHHHHcCCEEEEeccccccccCcCCCCccCCcEEE
Q 001586 710 DAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1049)
Q Consensus 710 d~~g~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~Pg~~GaDi~~ 788 (1049)
..|+++++++++ ++|++|++++|+ .+|.+. |+++|+++||++|+++++|++... ..+..|-..|+|+++
T Consensus 123 ----~~d~~~l~~~i~---~~TklV~lesP~NPtg~~~-di~~I~~la~~~gi~vvvD~t~~~--~~~~~pl~~gaDivv 192 (364)
T PRK07269 123 ----ANTEEELIAAIE---EDTDIVYIETPTNPLMVEF-DIEKVAKLAHAKGAKVIVDNTFYS--PIYQRPIELGADIVL 192 (364)
T ss_pred ----cCCHHHHHHhcC---cCceEEEEECCCCCCCeee-CHHHHHHHHHHcCCEEEEECCCcc--cccCCchhhCCcEEE
Confidence 258999999997 789999999995 588887 899999999999999999998532 223567778999999
Q ss_pred eCCCcccccCCCCCCCc---eeEEEEcc-cccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHc
Q 001586 789 LNLHKTFCIPHGGGGPG---MGPIGVKK-HLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMG 864 (1049)
Q Consensus 789 ~s~hK~f~~P~g~GGPg---~G~i~~~~-~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG 864 (1049)
+|+||+++ |+| .|++++++ ++.+.+.. . + ...+. +-+++ -+++...|
T Consensus 193 ~S~tK~l~------g~~d~~gG~v~~~~~~l~~~~~~-~-----------~-~~~G~-~~s~~---------~a~l~~~~ 243 (364)
T PRK07269 193 HSATKYLS------GHNDVLAGVVVTNDLELYEKLFY-N-----------L-NTTGA-VLSPF---------DSYLLMRG 243 (364)
T ss_pred ecCceecc------CCCcccceEEEeCcHHHHHHHHH-H-----------H-HHhCC-CCCHH---------HHHHHHcC
Confidence 99999995 333 57777754 34333210 0 0 00111 11111 24455666
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhcc---CCeeeccC
Q 001586 865 SKGLTEASKIAILNANYMAKRLEKH---YPILFRGV 897 (1049)
Q Consensus 865 ~eGl~~~~~~~~~~a~yL~~~L~~~---~~v~~~g~ 897 (1049)
-+.+..+.++..+++.++++.|+++ ..+.|++.
T Consensus 244 L~tL~~r~~~~~~na~~~a~~L~~~p~v~~v~ypg~ 279 (364)
T PRK07269 244 LKTLSLRMERSTANAQEVVAFLKKSPAVKEVLYTGK 279 (364)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHhCCCccEEeCCCc
Confidence 6778888888999999999999875 34566653
No 437
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=99.51 E-value=2.2e-12 Score=150.75 Aligned_cols=299 Identities=11% Similarity=0.085 Sum_probs=180.1
Q ss_pred hcHHHHHHHHHHHHHHhhCC--Ccc-ccccCchHH-HHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCE
Q 001586 628 QGYQEMFNNLGEWLCTITGF--DSF-SLQPNAGAA-GEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMK 703 (1049)
Q Consensus 628 ~G~~~~i~el~~~la~l~G~--~~~-~l~~~sGa~-ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~ 703 (1049)
+|..++...+.+++.+..|. +.. .+..++|++ |.+ ++++.+. .++++|+++......+...++..|++
T Consensus 68 ~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~Gs~~al~---~~~~~l~-----~~gd~Vlv~~P~y~~~~~~~~~~g~~ 139 (388)
T PRK07366 68 HGTLDFREAAAQWYEQRFGLAVDPETEVLPLIGSQEGTA---HLPLAVL-----NPGDFALLLDPGYPSHAGGVYLAGGQ 139 (388)
T ss_pred CCCHHHHHHHHHHHHHhhCCcCCCcCeEEECCCcHHHHH---HHHHHhC-----CCCCEEEEcCCCCcchHHHHHhcCCE
Confidence 56666666666677666564 333 455555554 432 2333321 25688999887766666778899999
Q ss_pred EEEEcCCCC--CCCCHHHHHHHHHhcCCCeEEEEEEcCC-cccccc--ccHHHHHHHHHHcCCEEEEeccccccc-cCcC
Q 001586 704 IVSVGTDAK--GNINIEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQ-VGLT 777 (1049)
Q Consensus 704 Vv~V~~d~~--g~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~--~di~eI~~lah~~G~ll~vD~A~~~a~-~gl~ 777 (1049)
++.+|++.+ ...|++++++++. +++++|++++|+ .+|.+- +.+++|+++|+++|+++++|.++..-. .+-.
T Consensus 140 ~~~v~~~~~~~~~~d~~~l~~~~~---~~~k~i~l~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~ 216 (388)
T PRK07366 140 IYPMPLRAENDFLPVFADIPTEVL---AQARLMVLSYPHNPTTAIAPLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEV 216 (388)
T ss_pred EEEEECCCccCCCCCHHHHHHhhc---ccceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEecchhhcccCCCC
Confidence 999999754 3578999988775 678899999994 699774 258888999999999999999864211 1111
Q ss_pred -CC--Ccc--CCc--EEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhH
Q 001586 778 -SP--GYI--GAD--VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSA 850 (1049)
Q Consensus 778 -~P--g~~--GaD--i~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~ 850 (1049)
.| ..+ ..+ |++.|+.|+|++| |-++|+++.++++...+-.. +...++++. .
T Consensus 217 ~~~~~~~~~~~~~~vi~~~SfSK~~g~~----GlRiG~~v~~~~li~~l~~~--------------~~~~~~~~~----~ 274 (388)
T PRK07366 217 EPPSILQADPEKSVSIEFFTLSKSYNMG----GFRIGFAIGNAQLIQALRQV--------------KAVVDFNQY----R 274 (388)
T ss_pred CCCChhhCCCCcccEEEEeecccccCCc----chhheehcCCHHHHHHHHHH--------------HhhcccCCC----H
Confidence 11 111 112 5567888988654 78899999887766543210 000111110 1
Q ss_pred HHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHH-HH
Q 001586 851 LILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRL-MD 929 (1049)
Q Consensus 851 ~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L-~~ 929 (1049)
.....+.+.+. ...+-+++..+...++.+++.+.|+++ .+.+..+.+..+ +.++++.. .+.+..+++++| .+
T Consensus 275 ~~~~~a~~~l~-~~~~~l~~~~~~~~~~r~~l~~~L~~~-~~~~~~p~~g~f--~~~~~~~~---~~~~~~~~~~~l~~~ 347 (388)
T PRK07366 275 GILNGAIAALT-GPQATVQQTVQIFRQRRDAFINALHQI-GWPVPLPEATMY--VWAKLPEP---WQGNSVEFCTQLVAQ 347 (388)
T ss_pred HHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHHHHC-CCcccCCCeeEE--EEEECCcc---cCCCHHHHHHHHHHh
Confidence 11111112221 113334555556667778888888875 222212222222 44565420 012456787776 56
Q ss_pred CCcccC-CCCCC--CCCEEEEEccCCCCHHHHHHHHHHHHHH
Q 001586 930 YGFHGP-TMSWP--VPGTLMIEPTESESKEELDRYCDALISI 968 (1049)
Q Consensus 930 ~Gi~~~-~~~~p--~~~~lri~~t~~~t~eeid~fv~aL~~i 968 (1049)
+|+.+. +..|+ ..+++||++.. +.++++..++.|.++
T Consensus 348 ~gv~v~pg~~f~~~~~~~iRi~~~~--~~~~l~~~l~rl~~~ 387 (388)
T PRK07366 348 TGVAASPGSGFGKSGEGYVRFALVH--DPDILEEAVERIAAF 387 (388)
T ss_pred CCEEEeCchHhCcCCCCeEEEEecC--CHHHHHHHHHHHHHh
Confidence 799864 32343 24789999873 578888888877653
No 438
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.51 E-value=8.1e-13 Score=153.56 Aligned_cols=206 Identities=24% Similarity=0.244 Sum_probs=142.5
Q ss_pred HHHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCC-ccHH---HHHhcCCEEEEEcC
Q 001586 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHG-TNPA---TAAMCGMKIVSVGT 709 (1049)
Q Consensus 634 i~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg-~~pa---~a~~~G~~Vv~V~~ 709 (1049)
..++++.++++.|.+.. +..++|..+..++ + ... .++++||++...|+ ++.. .+...|++++.++.
T Consensus 52 ~~~Le~~lA~l~g~~~~-~~~~sG~aai~~~-~---~~l-----~~Gd~Viv~~~~y~~~~~~~~~~~~~~G~~v~~v~~ 121 (377)
T PRK07671 52 RAALEELIAVLEGGHAG-FAFGSGMAAITAV-M---MLF-----SSGDHVILTDDVYGGTYRVMTKVLNRFGIEHTFVDT 121 (377)
T ss_pred HHHHHHHHHHHhCCCce-EEeCCHHHHHHHH-H---HHh-----CCCCEEEECCCccchHHHHHHHHHhcCCeEEEEECC
Confidence 45789999999998764 5566676544322 2 111 25688999887766 3322 23457999999875
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-ccccccccHHHHHHHHHHcCCEEEEeccccccccCcCCCCccCCcEEE
Q 001586 710 DAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1049)
Q Consensus 710 d~~g~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~Pg~~GaDi~~ 788 (1049)
.|+++++++++ ++|++|++++|+ .+|.+. |+++|+++||++|+++++|+++.. ..+..|..+|+|+++
T Consensus 122 -----~d~~~l~~ai~---~~tklV~le~P~NPtg~~~-dl~~I~~la~~~g~~lvvD~a~~~--~~~~~p~~~g~Divv 190 (377)
T PRK07671 122 -----SNLEEVEEAIR---PNTKAIYVETPTNPLLKIT-DIKKISTIAKEKGLLTIVDNTFMT--PYWQSPISLGADIVL 190 (377)
T ss_pred -----CCHHHHHHhcC---CCCeEEEEECCCCCCCccc-CHHHHHHHHHHcCCEEEEECCCCc--cccCChhhhCCeEEE
Confidence 48999999997 789999999995 589887 899999999999999999998542 223467778999999
Q ss_pred eCCCcccccCCCCCCCc---eeEEEEcc-cccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHc
Q 001586 789 LNLHKTFCIPHGGGGPG---MGPIGVKK-HLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMG 864 (1049)
Q Consensus 789 ~s~hK~f~~P~g~GGPg---~G~i~~~~-~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG 864 (1049)
.|++|+|+ ||+ .|++++++ .+...+.. . + ..++...+ + -.+|+...|
T Consensus 191 ~S~sK~l~------G~~~~~~G~~v~~~~~l~~~~~~--~----------~-~~~g~~~~-~---------~~a~l~~~~ 241 (377)
T PRK07671 191 HSATKYLG------GHSDVVAGLVVVNSPELAEDLHF--V----------Q-NSTGGILG-P---------QDSWLLLRG 241 (377)
T ss_pred ecCccccc------CCccceeEEEEeCcHHHHHHHHH--H----------H-HhhcCCCC-H---------HHHHHHHcC
Confidence 99999984 443 46666654 34332210 0 0 01111111 1 123344455
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhcc
Q 001586 865 SKGLTEASKIAILNANYMAKRLEKH 889 (1049)
Q Consensus 865 ~eGl~~~~~~~~~~a~yL~~~L~~~ 889 (1049)
.+-+..+.++..+|+..+.+.|+++
T Consensus 242 l~tl~~R~~~~~~na~~la~~L~~~ 266 (377)
T PRK07671 242 LKTLGIRMEEHETNSRAIAEFLNNH 266 (377)
T ss_pred cChHHHHHHHHHHHHHHHHHHHHcC
Confidence 5666677788889999999999876
No 439
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.51 E-value=5.3e-12 Score=138.55 Aligned_cols=296 Identities=20% Similarity=0.187 Sum_probs=181.0
Q ss_pred HHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCC-CCCccHH---HHHhcCCEEEEEcCCC
Q 001586 636 NLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVS-AHGTNPA---TAAMCGMKIVSVGTDA 711 (1049)
Q Consensus 636 el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~s-aHg~~pa---~a~~~G~~Vv~V~~d~ 711 (1049)
.++++++.|=|.-.. +...||-.+. .+++.... +.+|+|+-+.. +-|++-- ..+.+|++|++|+.
T Consensus 66 vlE~RiAaLEGG~aa-~a~aSG~AA~---~~ai~~la-----~aGD~iVss~~LYGGT~~lf~~tl~~~Gi~v~fvd~-- 134 (426)
T COG2873 66 VLEERIAALEGGVAA-LAVASGQAAI---TYAILNLA-----GAGDNIVSSSKLYGGTYNLFSHTLKRLGIEVRFVDP-- 134 (426)
T ss_pred HHHHHHHHhhcchhh-hhhccchHHH---HHHHHHhc-----cCCCeeEeeccccCchHHHHHHHHHhcCcEEEEeCC--
Confidence 567888888775442 4445554443 33332211 25788885443 3334333 25679999999997
Q ss_pred CCCCCHHHHHHHHHhcCCCeEEEEEEcC-CccccccccHHHHHHHHHHcCCEEEEeccccccccCcCCCCccCCcEEEeC
Q 001586 712 KGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHLN 790 (1049)
Q Consensus 712 ~g~iD~~~L~~~i~~~~~~taaV~it~P-n~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~Pg~~GaDi~~~s 790 (1049)
.|++.++++|+ ++|++|+++.- |.-+.+. ||+.|+++||++|++++||-. .+-.-+++|-+.|+||++-|
T Consensus 135 ---~d~~~~~~aI~---~nTkavf~EtigNP~~~v~-Die~ia~iAh~~gvpliVDNT--~atpyl~rP~~hGADIVvHS 205 (426)
T COG2873 135 ---DDPENFEAAID---ENTKAVFAETIGNPGLDVL-DIEAIAEIAHRHGVPLIVDNT--FATPYLCRPIEHGADIVVHS 205 (426)
T ss_pred ---CCHHHHHHHhC---cccceEEEEeccCCCcccc-CHHHHHHHHHHcCCcEEEecC--CCcceecchhhcCCCEEEEe
Confidence 47999999998 99999999875 5566665 899999999999999999954 44456789999999999999
Q ss_pred CCcccccCCCCCCCceeEEEEccccccc-CCCCccccCC-CCCCCC----------------C---CCCCCCCCccchhh
Q 001586 791 LHKTFCIPHGGGGPGMGPIGVKKHLAPF-LPSHPVVSTG-GIPAPE----------------K---SQPLGTIAAAPWGS 849 (1049)
Q Consensus 791 ~hK~f~~P~g~GGPg~G~i~~~~~l~~~-lpg~~vg~t~-~~~~~~----------------~---~~~t~~i~sa~~g~ 849 (1049)
..||++ +-|-.+|-+.++....+. .+++....+. +...++ | -..++..- +|+
T Consensus 206 ~TK~ig----GhGt~iGG~iVD~G~FDw~~~~rfP~~~~p~p~YhGl~~~~~~g~~af~~~~r~~~lRDlGa~l-sPf-- 278 (426)
T COG2873 206 ATKYIG----GHGTAIGGVIVDGGKFDWTANGRFPEFTTPDPSYHGLVYTETFGNAAFIIKARVQLLRDLGATL-SPF-- 278 (426)
T ss_pred eccccc----CCccccceEEEeCCccccccCCCCcccCCCCccccceehhhhcccHHHHHHHHHHHHHhccccc-CcH--
Confidence 999984 223334444444321111 1333211110 000010 0 00011111 122
Q ss_pred HHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHHH
Q 001586 850 ALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMD 929 (1049)
Q Consensus 850 ~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~ 929 (1049)
.+++...|-|-|.-+.++.++||..+++.|+++.+|.+. +.+.+. +-+..+++++...
T Consensus 279 -------nAfl~lqGlETL~LRmerH~~NA~~vA~~L~~HpkV~~V------------~YpgL~---~~~~h~la~kyl~ 336 (426)
T COG2873 279 -------NAFLLLQGLETLSLRMERHCENALKVAEFLENHPKVAWV------------NYPGLA---SHPYHALAKKYLP 336 (426)
T ss_pred -------HHHHHHhchhhhHHHHHHHHHhHHHHHHHHhcCCCeeee------------ecCCCC---CCcchhHHHhhcc
Confidence 244566778888888999999999999999988554321 111110 1234677777666
Q ss_pred CCcccCCCCCCCCCEEEEEccCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCccccccch
Q 001586 930 YGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKVTCLFLHHGY 998 (1049)
Q Consensus 930 ~Gi~~~~~~~p~~~~lri~~t~~~t~eeid~fv~aL~~i~~~i~~i~~g~~~~~~~~l~~~ph~~~~~~ 998 (1049)
+|.- +.+.+. ..--.|.-.+|++.|+-+. .+.+| | +...|.-+|.+++++.
T Consensus 337 ~g~g---------~vltF~--~kgg~ea~~~fi~~l~L~s-~laNv--G----D~rsLvIHPAsTTH~q 387 (426)
T COG2873 337 KGAG---------AVLTFG--VKGGYEAGKKFIDALKLFS-HLANI--G----DARSLVIHPASTTHRQ 387 (426)
T ss_pred CCCc---------eEEEEE--ecChHHHHHHHHHHHHHHH-hhccc--c----ccceeEecCcccchhc
Confidence 5532 222222 2234577788999887543 33444 4 3456667777776643
No 440
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=99.51 E-value=3.6e-12 Score=150.19 Aligned_cols=307 Identities=12% Similarity=0.084 Sum_probs=176.8
Q ss_pred hcHHHHHHHHHHHHHHhhC--------CCccccccCch-HHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHH
Q 001586 628 QGYQEMFNNLGEWLCTITG--------FDSFSLQPNAG-AAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAA 698 (1049)
Q Consensus 628 ~G~~~~i~el~~~la~l~G--------~~~~~l~~~sG-a~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~ 698 (1049)
+|..++...+.+++.+.++ .+...+..++| ++|.. ++++.+. .++++|+++...+..+...++
T Consensus 75 ~G~~~Lr~aia~~~~~~~~~~~~~~~~~~~~~i~it~G~~~al~---~~~~~~~-----~~gd~vlv~~P~y~~~~~~~~ 146 (412)
T PTZ00433 75 VGSPEAREAVATYWRNSFVHKESLKSTIKKDNVVLCSGVSHAIL---MALTALC-----DEGDNILVPAPGFPHYETVCK 146 (412)
T ss_pred CCcHHHHHHHHHHHHhhccccccccCCCChhhEEEeCChHHHHH---HHHHHhc-----CCCCEEEEccCCcccHHHHHH
Confidence 4555555455555544332 33334444444 44443 3333331 256889999887777777788
Q ss_pred hcCCEEEEEcCCC--CCCCCHHHHHHHHHhcCCCeEEEEEEcCC-cccccc--ccHHHHHHHHHHcCCEEEEeccccccc
Q 001586 699 MCGMKIVSVGTDA--KGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQ 773 (1049)
Q Consensus 699 ~~G~~Vv~V~~d~--~g~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~--~di~eI~~lah~~G~ll~vD~A~~~a~ 773 (1049)
..|++++.+++++ ++.+|+++|+++++ +++++|++++|+ .+|.+- +++++|+++|+++|+++++|+++..-.
T Consensus 147 ~~g~~~~~i~~~~~~~~~~d~~~l~~~~~---~~~~~i~~~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~ 223 (412)
T PTZ00433 147 AYGIEMRFYNCRPEKDWEADLDEIRRLVD---DRTKALIMTNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIYAGMV 223 (412)
T ss_pred HcCCEEEEEecCccccCcCCHHHHHHHhc---cCceEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCeEEEeccccccc
Confidence 9999999999864 36799999999886 678999999995 599753 268999999999999999999864211
Q ss_pred -cCcCCC--Ccc--C-CcEEEeCCCcccccCCCCCCCceeEEEEc-c-----cccccCCCCccccCCCCCCCCCCCCCCC
Q 001586 774 -VGLTSP--GYI--G-ADVCHLNLHKTFCIPHGGGGPGMGPIGVK-K-----HLAPFLPSHPVVSTGGIPAPEKSQPLGT 841 (1049)
Q Consensus 774 -~gl~~P--g~~--G-aDi~~~s~hK~f~~P~g~GGPg~G~i~~~-~-----~l~~~lpg~~vg~t~~~~~~~~~~~t~~ 841 (1049)
.+-..+ ..+ . .-|++.++.|+|++| |-++|++.+. + ++...+.. . . ....+
T Consensus 224 ~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~p----GlRlG~~i~~~p~~~~~~~~~~~~~--~----------~-~~~~~ 286 (412)
T PTZ00433 224 FNGATFTSVADFDTTVPRVILGGTAKNLVVP----GWRLGWLLLVDPHGNGGDFLDGMKR--L----------G-MLVCG 286 (412)
T ss_pred cCCCCccchhhccCCCceEEEccchhhcCCC----CeeEEEEEEeCCcccHHHHHHHHHH--H----------h-hccCC
Confidence 110001 111 1 125567788887544 7789999872 1 22221100 0 0 00011
Q ss_pred CCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeEEEEeccCccccCCCCHH
Q 001586 842 IAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPE 921 (1049)
Q Consensus 842 i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~ 921 (1049)
+++ ..+. ++..++..-..+-+.+..+...++.+++.+.|++...+.+..+.+..+ +.++++.-......+..
T Consensus 287 ~~~--~~q~----a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~gg~f--~~~~l~~~~~~~~~~~~ 358 (412)
T PTZ00433 287 PCS--VVQA----ALGEALLNTPQEHLEQIVAKLEEGAMVLYNHIGECIGLSPTMPRGSMF--LMSRLDLEKFRDIKSDV 358 (412)
T ss_pred CCh--HHHH----HHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCeeEE--EEEEechhhcCCCCCHH
Confidence 121 1111 122222211122234445556667788888887642222212222221 23444310000002457
Q ss_pred HHHHHHH-HCCcccC-CCCCCCCCEEEEEccCCCCHHHHHHHHHHHHHHHHHH
Q 001586 922 DVAKRLM-DYGFHGP-TMSWPVPGTLMIEPTESESKEELDRYCDALISIREEI 972 (1049)
Q Consensus 922 ~v~k~L~-~~Gi~~~-~~~~p~~~~lri~~t~~~t~eeid~fv~aL~~i~~~i 972 (1049)
+++++|. ++|+.+. .-.|...+++|+++.. .++++++.++.|.++++..
T Consensus 359 ~~~~~ll~~~gV~v~pg~~f~~~~~iRis~~~--~~e~l~~al~~l~~~~~~~ 409 (412)
T PTZ00433 359 EFYEKLLEEENVQVLPGEIFHMPGFTRLTISR--PVEVLREAVERIKAFCERH 409 (412)
T ss_pred HHHHHHHHhcCEEEeCccccCCCCeEEEEecC--CHHHHHHHHHHHHHHHHHh
Confidence 8888887 5799864 3334446899999974 4778888888888776543
No 441
>PRK07908 hypothetical protein; Provisional
Probab=99.51 E-value=3.1e-12 Score=147.36 Aligned_cols=277 Identities=16% Similarity=0.118 Sum_probs=167.3
Q ss_pred HHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCEEEEEcCCCCCCC
Q 001586 636 NLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNI 715 (1049)
Q Consensus 636 el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~Vv~V~~d~~g~i 715 (1049)
++++.+++.+|.+...+..++|++. +..++++ + .++ .++++..........++..|++++.+++++++.+
T Consensus 62 ~lr~aia~~~~~~~~~I~it~Ga~~--al~~~~~-l------~~~-~viv~~P~y~~~~~~~~~~G~~i~~v~~~~~~~~ 131 (349)
T PRK07908 62 RARAAVAARHGRTPDEVLLLAGAAE--GFALLAR-L------RPR-RAAVVHPSFTEPEAALRAAGIPVHRVVLDPPFRL 131 (349)
T ss_pred HHHHHHHHHhCcChhhEEECCCHHH--HHHHHHh-c------CCC-eEEEeCCCChHHHHHHHHcCCEEEeeccCcccCc
Confidence 5677888888887766655555542 2223333 2 123 4555533222233346789999999999877788
Q ss_pred CHHHHHHHHHhcCCCeEEEEEEcCC-ccccccccHHHHHHHHHHcCCEEEEeccccccccCcCCC-CccCC-c-EEEeCC
Q 001586 716 NIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSP-GYIGA-D-VCHLNL 791 (1049)
Q Consensus 716 D~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~P-g~~Ga-D-i~~~s~ 791 (1049)
|++++ + ++++++++++|+ .+|.+. +.++|.++|+ ++.++++|+++..-..+-..+ ..... + ++..|+
T Consensus 132 d~~~l----~---~~~~~i~l~np~NPTG~~~-~~~~l~~l~~-~~~~iIvDe~y~~~~~~~~~~l~~~~~~~~i~i~S~ 202 (349)
T PRK07908 132 DPAAV----P---DDADLVVIGNPTNPTSVLH-PAEQLLALRR-PGRILVVDEAFADAVPGEPESLAGDDLPGVLVLRSL 202 (349)
T ss_pred ChhHh----c---cCCCEEEEcCCCCCCCCCc-CHHHHHHHHh-cCCEEEEECcchhhccCCccccccccCCCEEEEeec
Confidence 88854 3 567789999995 599988 6899999996 488999999863211111111 11112 3 445588
Q ss_pred CcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHH
Q 001586 792 HKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEA 871 (1049)
Q Consensus 792 hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~ 871 (1049)
+|+|++| |.++|++++++++.+.+.... . ..++++ ....++.+++...+.+-+++.
T Consensus 203 SK~~~l~----GlRiG~~~~~~~~~~~~~~~~------------~--~~~~~~------~~~~a~~~~~~~~~~~~~~~~ 258 (349)
T PRK07908 203 TKTWSLA----GLRVGYALGAPDVLARLTRGR------------A--HWPVGT------LQLEAIAACCAPRAVAEAAAD 258 (349)
T ss_pred ccccCCc----cceeeeeecCHHHHHHHHhcC------------C--CCCccH------HHHHHHHHHhcccchHHHHHH
Confidence 9988544 778899999877665432100 0 011111 111122222221112234455
Q ss_pred HHHHHHHHHHHHHHHhccCCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHHHCCcccCC-CCCC--CCCEEEEE
Q 001586 872 SKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPT-MSWP--VPGTLMIE 948 (1049)
Q Consensus 872 ~~~~~~~a~yL~~~L~~~~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~-~~~p--~~~~lri~ 948 (1049)
.+...++.+++.+.|+++ .+.+..+.+.. -+.++++ +...+.+.|.++||.+.. ..|+ ..+++||+
T Consensus 259 ~~~~~~~r~~l~~~L~~~-~~~~~~p~~g~--~~~~~~~--------~~~~~~~~l~~~gI~v~~g~~f~~~~~~~vRis 327 (349)
T PRK07908 259 AARLAADRAEMVAGLRAV-GARVVDPAAAP--FVLVRVP--------DAELLRKRLRERGIAVRRGDTFPGLDPDYLRLA 327 (349)
T ss_pred HHHHHHHHHHHHHHHHhC-CcEeccCCCce--EEEEECC--------cHHHHHHHHHhCCEEEEECCCCCCCCCCeEEEE
Confidence 566667788888999875 33222222211 2345553 256788889999998643 2342 25799999
Q ss_pred ccCCCCHHHHHHHHHHHHHHH
Q 001586 949 PTESESKEELDRYCDALISIR 969 (1049)
Q Consensus 949 ~t~~~t~eeid~fv~aL~~i~ 969 (1049)
+. +.+|+++|+++|++++
T Consensus 328 ~~---~~~~~~~l~~al~~~~ 345 (349)
T PRK07908 328 VR---PRAEVPVLVQALAEIL 345 (349)
T ss_pred eC---CCccHHHHHHHHHHHH
Confidence 94 6789999999998874
No 442
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.51 E-value=4.9e-12 Score=148.15 Aligned_cols=257 Identities=19% Similarity=0.202 Sum_probs=157.4
Q ss_pred CCCEEEEcCCCCCccHHHHHhcCCEEEEEcCCC-CCC--CCHHHHHHHHHhcCCCeEEEEEEcCC-cccccc--ccHHHH
Q 001586 679 HRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA-KGN--INIEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEI 752 (1049)
Q Consensus 679 ~r~~VLip~saHg~~pa~a~~~G~~Vv~V~~d~-~g~--iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~--~di~eI 752 (1049)
++++|+++...+..+...++..|++++.++.+. +|. .|+++|+++++ +++++|++++|+ .+|.+- +++++|
T Consensus 111 ~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~g~~~~~~~~l~~~~~---~~~~~v~i~~p~NPtG~~~~~~~~~~i 187 (397)
T PRK07568 111 PGDEILVPEPFYANYNGFATSAGVKIVPVTTKIEEGFHLPSKEEIEKLIT---PKTKAILISNPGNPTGVVYTKEELEML 187 (397)
T ss_pred CCCEEEEecCCCccHHHHHHHcCCEEEEeecCcccCCCCCCHHHHHHhcC---ccceEEEEECCCCCCCccCCHHHHHHH
Confidence 567899988766655556788999999999863 442 36899999886 688999999995 689774 258999
Q ss_pred HHHHHHcCCEEEEecccccc-ccC--cCCCCcc-C-Cc--EEEeCCCcccccCCCCCCCceeEEEEc-ccccccCCCCcc
Q 001586 753 CKIIHDNGGQVYMDGANMNA-QVG--LTSPGYI-G-AD--VCHLNLHKTFCIPHGGGGPGMGPIGVK-KHLAPFLPSHPV 824 (1049)
Q Consensus 753 ~~lah~~G~ll~vD~A~~~a-~~g--l~~Pg~~-G-aD--i~~~s~hK~f~~P~g~GGPg~G~i~~~-~~l~~~lpg~~v 824 (1049)
+++|+++|+++++|+++..- ..+ ..+...+ + .| +++.|++|+|++| |.++|++.+. +.+...+-. .
T Consensus 188 ~~~~~~~~~~ii~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~----G~R~G~~~~~~~~~~~~~~~--~ 261 (397)
T PRK07568 188 AEIAKKHDLFLISDEVYREFVYDGLKYTSALSLEGLEDRVIIIDSVSKRYSAC----GARIGCLISKNKELIAAAMK--L 261 (397)
T ss_pred HHHHHHCCcEEEEeccchhcccCCCCccChhhcCCCcCCEEEEecchhhccCC----CcceEEEecCCHHHHHHHHH--H
Confidence 99999999999999975311 011 0011111 1 22 6677888988543 6789999875 444432210 0
Q ss_pred ccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeE
Q 001586 825 VSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHE 904 (1049)
Q Consensus 825 g~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~~~v~~~g~~g~~~~e 904 (1049)
. . ...+.+...+. ++..++. .+.+-+++..+...++.+++.+.|+++..+.+..+.+.++
T Consensus 262 ----------~-~--~~~~~s~~~q~----~~~~~l~-~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~g~~~-- 321 (397)
T PRK07568 262 ----------C-Q--ARLSPPTLEQI----GAAALLD-TPESYFDEVREEYKKRRDILYEELNKIPGVVCEKPKGAFY-- 321 (397)
T ss_pred ----------h-h--ccCCCCcHHHH----HHHHHhh-CCHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCcceE--
Confidence 0 0 01111111121 1222222 1333344555556677888999998752222222223221
Q ss_pred EEEeccCccccCCCCHHHHHHHHHH------CCcccC-CCCC---C-C-CCEEEEEccCCCCHHHHHHHHHHHHHHHHHH
Q 001586 905 FIVDLRGLKNTAGIEPEDVAKRLMD------YGFHGP-TMSW---P-V-PGTLMIEPTESESKEELDRYCDALISIREEI 972 (1049)
Q Consensus 905 ~iv~~~~~~~~~g~~~~~v~k~L~~------~Gi~~~-~~~~---p-~-~~~lri~~t~~~t~eeid~fv~aL~~i~~~i 972 (1049)
+.++++ ..+..++++.|.+ +|+.+. .-.| | . .+++|+++. .+.+++++.++.|.+++++.
T Consensus 322 ~~~~l~------~~~~~~~~~~l~~~~~~~~~gv~v~pg~~f~~~~~~~~~~iRls~~--~~~~~~~~~~~~l~~~l~~~ 393 (397)
T PRK07568 322 IIAKLP------VDDAEDFAKWLLTDFNYNGETVMVAPASGFYATPGLGKNEIRIAYV--LNEEDLKRAMEILKEALEKY 393 (397)
T ss_pred EEEecC------CCCHHHHHHHHHhhcccccceEEEeCchHhcCCCCCCCCeEEEEEe--CCHHHHHHHHHHHHHHHHHh
Confidence 335554 1256788888865 577753 2223 2 1 368999986 35788999999998877653
No 443
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=99.51 E-value=4.3e-12 Score=147.12 Aligned_cols=284 Identities=16% Similarity=0.157 Sum_probs=174.7
Q ss_pred HHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCC-CEEEEcCCCCCccHHHHHhcCCEEEEEcCCC--
Q 001586 635 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHR-NVCIIPVSAHGTNPATAAMCGMKIVSVGTDA-- 711 (1049)
Q Consensus 635 ~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r-~~VLip~saHg~~pa~a~~~G~~Vv~V~~d~-- 711 (1049)
.++++.+++.+|.+...+..++|++. +..++++.+. .++ ++|+++...++.+...+++.|.+++.+|.+.
T Consensus 62 ~~lr~~ia~~~~~~~~~I~~t~G~~~--~l~~~~~~~~-----~~g~~~vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~ 134 (364)
T PRK04781 62 PGLRSALAALYGCAPEQLLIGRGSDE--AIDLLVRALC-----VPGRDAVLVTPPVFGMYAVCARLQNAPLVEVPLVDGA 134 (364)
T ss_pred HHHHHHHHHHhCcChHHEEEeCCHHH--HHHHHHHHhc-----CCCCCeEEEcCCChHHHHHHHHHcCCEEEEEecCCCc
Confidence 47788889999988766666666542 2233344331 134 6788887655444455788999999999842
Q ss_pred CC-CCCHHHHHHHHHhcCCCeEEEEEEcCC-ccccccccHHHHHHHHHH--cCCEEEEeccccccccCcCCC---CccCC
Q 001586 712 KG-NINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHD--NGGQVYMDGANMNAQVGLTSP---GYIGA 784 (1049)
Q Consensus 712 ~g-~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~~di~eI~~lah~--~G~ll~vD~A~~~a~~gl~~P---g~~Ga 784 (1049)
+| .+|++++.+++. .+++++|++++|| .+|.+- +.+++.++++. +++++++|+++.. +..-..+ -+...
T Consensus 135 ~~~~~d~~~l~~~~~--~~~~~lv~l~~p~NPTG~~~-~~~~~~~l~~~~~~~~~iI~Deay~~-f~~~~~~~~~~~~~~ 210 (364)
T PRK04781 135 DGFHADVPAIVAAAL--ASNAKLVFLCSPSNPAGSAI-ALDQIERALQALQGKALVVVDEAYGE-FSDVPSAVGLLARYD 210 (364)
T ss_pred cCCCcCHHHHHHHHh--ccCCeEEEEcCCCCCCCCCc-CHHHHHHHHHhCCCCcEEEEeCcchh-hcCCcchHHHHhhCC
Confidence 34 579999866553 2688999999995 599887 57777777764 4789999998631 1110111 01111
Q ss_pred c-EEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHH
Q 001586 785 D-VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMM 863 (1049)
Q Consensus 785 D-i~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~l 863 (1049)
. +++.++.|+|++| |.++|++.+++++...+-.. +...++++ .++ .++..+|. -
T Consensus 211 ~vi~~~SfSK~~gl~----GlRvGy~v~~~~l~~~l~~~--------------~~~~~~~~--~~~----~~a~~~l~-~ 265 (364)
T PRK04781 211 NLAVLRTLSKAHALA----AARIGSLIANAELIAVLRRC--------------QAPYPVPT--PCA----ALAEQALS-A 265 (364)
T ss_pred CEEEEecChhhcccc----cceeeeeeCCHHHHHHHHhc--------------cCCCCCCH--HHH----HHHHHHHh-c
Confidence 2 5566778877544 78899999987766543210 00111221 111 11222332 1
Q ss_pred c-hhhHHHHHHHHHHHHHHHHHHHhcc--CCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHHHCCcccCCC-CC
Q 001586 864 G-SKGLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTM-SW 939 (1049)
Q Consensus 864 G-~eGl~~~~~~~~~~a~yL~~~L~~~--~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~-~~ 939 (1049)
+ .+-+.+..+...++.+++.+.|+++ +...++ +.+.+ +.++++ +..++.+.|.++||.+... .|
T Consensus 266 ~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p-~~g~f---~~~~~~--------~~~~~~~~l~~~gI~v~~~~~~ 333 (364)
T PRK04781 266 PALAVTARRVAEVRAERERLHAALAQLPGVRRVYP-SQGNF---LLVRFD--------DAEAAFQALLAAGVVVRDQRAA 333 (364)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeECC-CCCcE---EEEEcC--------CHHHHHHHHHHCCeEEeeCCCC
Confidence 2 1222333444556678888888764 221232 22322 445553 3578889999999987543 23
Q ss_pred C-CCCEEEEEccCCCCHHHHHHHHHHHHHHH
Q 001586 940 P-VPGTLMIEPTESESKEELDRYCDALISIR 969 (1049)
Q Consensus 940 p-~~~~lri~~t~~~t~eeid~fv~aL~~i~ 969 (1049)
+ ..+++||++. +.++.++|+++|+++.
T Consensus 334 ~~~~~~~Ris~~---~~~~~~~l~~al~~~~ 361 (364)
T PRK04781 334 PRLSDALRITLG---TPEQNDRVLAALQRTQ 361 (364)
T ss_pred CCCCCeEEEeCC---CHHHHHHHHHHHHHHH
Confidence 3 4579999985 6899999999998764
No 444
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.50 E-value=2.4e-12 Score=152.25 Aligned_cols=289 Identities=15% Similarity=0.228 Sum_probs=176.3
Q ss_pred HHHHHHHHHHhh-CCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEE-EcCCCCCccHHHHHhcC----------
Q 001586 634 FNNLGEWLCTIT-GFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCG---------- 701 (1049)
Q Consensus 634 i~el~~~la~l~-G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VL-ip~saHg~~pa~a~~~G---------- 701 (1049)
..++.++|++++ +.+. .++.++|++++++++++++.|. ++++|| ...+.||....+....|
T Consensus 92 ~~~la~~L~~~~~~~~~-v~~~~sGseA~e~Aik~a~~~~------g~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~ 164 (426)
T PRK00062 92 EVELAELVIELVPSIEM-VRMVNSGTEATMSAIRLARGYT------GRDKIIKFEGCYHGHADSLLVKAGSGAATLGLPD 164 (426)
T ss_pred HHHHHHHHHHhCCCCCE-EEEecCHHHHHHHHHHHHHHHh------CCCeEEEEcCccCCchhhhhhccCccccccCCCC
Confidence 347888888887 4444 4678999999999999888762 245555 56778887544322211
Q ss_pred ---CE------EEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEc-CCccccccc---cHHHHHHHHHHcCCEEEEecc
Q 001586 702 ---MK------IVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTY-PSTHGVYEE---GIDEICKIIHDNGGQVYMDGA 768 (1049)
Q Consensus 702 ---~~------Vv~V~~d~~g~iD~~~L~~~i~~~~~~taaV~it~-Pn~~G~i~~---di~eI~~lah~~G~ll~vD~A 768 (1049)
.. +..++ ..|++++++.++++.+++++|+++. ++..|.+.+ .+++|.++|++||+++++|++
T Consensus 165 ~~~~~~~~~~~~~~~~-----~~d~~~l~~~i~~~~~~~aaiivEpv~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv 239 (426)
T PRK00062 165 SPGVPEDFAKHTLTAP-----YNDLEAVEELFEEYGDEIAAVIVEPVAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEV 239 (426)
T ss_pred CCCCCcccccceEEcC-----CCCHHHHHHHHHhCCCcEEEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeec
Confidence 10 11111 1389999999976667898998873 456787752 289999999999999999998
Q ss_pred ccccccCcCCCC------ccC--CcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCC
Q 001586 769 NMNAQVGLTSPG------YIG--ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLG 840 (1049)
Q Consensus 769 ~~~a~~gl~~Pg------~~G--aDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~ 840 (1049)
+. |+ +.| .++ +|++++ .|.++ +|..+|++++++++...+... + .....+
T Consensus 240 ~~----G~-r~g~~~~~~~~~~~pDi~~~--gK~l~-----~G~p~ga~~~~~~i~~~~~~~--~---------~~~~~~ 296 (426)
T PRK00062 240 MT----GF-RVALGGAQGYYGVTPDLTTL--GKIIG-----GGLPVGAFGGRREIMEQLAPL--G---------PVYQAG 296 (426)
T ss_pred hh----cc-ccCCccHHHHhCCCcchHhh--hhHhh-----CCCcceeeeEHHHHHHhhccC--C---------Cceecc
Confidence 63 22 111 122 576544 57763 344467778888777665310 0 000001
Q ss_pred CCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc---CCee--eccCCCceeeEEEEeccCccc-
Q 001586 841 TIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRGLKN- 914 (1049)
Q Consensus 841 ~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~---~~v~--~~g~~g~~~~e~iv~~~~~~~- 914 (1049)
. ..+++..++++.+.|..+..+. ..++...+.+++.++|++. +.+. ..+ .|.. ..+.++.+....
T Consensus 297 T----~~~~p~~~aaa~a~L~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~~~~~vrg-~G~~-~~i~l~~~~~~~~ 367 (426)
T PRK00062 297 T----LSGNPLAMAAGLATLKLLKEPG---FYEELEALTKRLAEGLKEAAKKAGIPLTVNR-VGSM-FGLFFTDEPVTNY 367 (426)
T ss_pred c----CcCCHHHHHHHHHHHHHHhcch---HHHHHHHHHHHHHHHHHHHHHHcCCceEEEE-ecce-EEEEEecCCCcch
Confidence 1 1234556667777888776553 3445556778888888753 2221 112 1322 223333211000
Q ss_pred ---cCC--CCHHHHHHHHHHCCcccCCCCCCCCCEEEEEccCCCCHHHHHHHHHHHHHHHHH
Q 001586 915 ---TAG--IEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREE 971 (1049)
Q Consensus 915 ---~~g--~~~~~v~k~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~eeid~fv~aL~~i~~~ 971 (1049)
..+ .....+.+.|.++|+.+....+ +.++++ ..+|++|||+++++|++++.+
T Consensus 368 ~~~~~~~~~~~~~i~~~l~~~Gv~v~~~~~---~~~~~~--~~~t~~ei~~~~~~l~~~l~~ 424 (426)
T PRK00062 368 ADAKKSDTERFARFFHAMLDEGVYLAPSQF---EAGFVS--AAHTDEDIEKTLEAARKAFAA 424 (426)
T ss_pred hhhccccHHHHHHHHHHHHHCCeEeecCCc---Cceeee--ccCCHHHHHHHHHHHHHHHHh
Confidence 000 0135788889999999764332 345554 568999999999999988765
No 445
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.50 E-value=1.8e-12 Score=148.28 Aligned_cols=269 Identities=17% Similarity=0.177 Sum_probs=167.5
Q ss_pred HHHHHHHHHhhCCCccccccCchHH-HHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCEEEEEcCCCCC
Q 001586 635 NNLGEWLCTITGFDSFSLQPNAGAA-GEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKG 713 (1049)
Q Consensus 635 ~el~~~la~l~G~~~~~l~~~sGa~-ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~Vv~V~~d~~g 713 (1049)
.++++.+++++|.+...+..++|++ +.. .+ .+.+ .++ +|+++...+..+...++..|++++.++
T Consensus 50 ~~lr~~la~~~~~~~~~i~~t~G~~~~i~-~~--~~~l------~~g-~vl~~~p~y~~~~~~~~~~g~~~~~~~----- 114 (330)
T TIGR01140 50 DELRAAAAAYYGLPAASVLPVNGAQEAIY-LL--PRLL------APG-RVLVLAPTYSEYARAWRAAGHEVVELP----- 114 (330)
T ss_pred HHHHHHHHHHhCCChhhEEECCCHHHHHH-HH--HHHh------CCC-eEEEeCCCcHHHHHHHHHcCCEEEEeC-----
Confidence 4788999999998755555555554 432 22 2221 134 578777666556666788999998887
Q ss_pred CCCHHHHHHHHHhcCCCeEEEEEEcCC-ccccccc--cHHHHHHHHHHcCCEEEEeccccccccCcCCCC----ccCCcE
Q 001586 714 NINIEELRKAAEANRDNLSTLMVTYPS-THGVYEE--GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPG----YIGADV 786 (1049)
Q Consensus 714 ~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~~--di~eI~~lah~~G~ll~vD~A~~~a~~gl~~Pg----~~GaDi 786 (1049)
|+++++++++ ++++|++++|+ .+|.+-+ .+++|+++|+++|+++++|.++...... .... ..+.++
T Consensus 115 --d~~~l~~~~~----~~~~v~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~-~~~~~~~~~~~~~i 187 (330)
T TIGR01140 115 --DLDRLPAALE----ELDVLVLCNPNNPTGRLIPPETLLALAARLRARGGWLVVDEAFIDFTPD-ASLAPQAARFPGLV 187 (330)
T ss_pred --CHHHHHhhcc----cCCEEEEeCCCCCCCCCCCHHHHHHHHHHhHhcCCEEEEECcccccCCc-cchhhHhccCCCEE
Confidence 8899998884 46688899995 6898761 3778889999999999999986311111 0111 124568
Q ss_pred EEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchh
Q 001586 787 CHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSK 866 (1049)
Q Consensus 787 ~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~e 866 (1049)
++.+++|+|+.| |-++|++++++++...+... + ....++ .....++..++. ..
T Consensus 188 ~~~S~SK~~g~~----G~R~G~i~~~~~~~~~l~~~------------~--~~~~~s------~~~q~~~~~~l~---~~ 240 (330)
T TIGR01140 188 VLRSLTKFFGLA----GLRLGFVVAHPALLARLREA------------L--GPWTVN------GPARAAGRAALA---DT 240 (330)
T ss_pred EEEecchhhcCc----hhhhhheeCCHHHHHHHHhc------------C--CCCCch------HHHHHHHHHHHh---ch
Confidence 889999998533 45679999988766554211 0 001111 111222233332 33
Q ss_pred hH-HHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHHHCCcccCC-CCCC--CC
Q 001586 867 GL-TEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPT-MSWP--VP 942 (1049)
Q Consensus 867 Gl-~~~~~~~~~~a~yL~~~L~~~~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~-~~~p--~~ 942 (1049)
++ ++..++...+.+++.+.|+++-.+...+..+ .+ ++++++ +..++.++|.++||.+.. -.|+ -.
T Consensus 241 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~f--~~~~~~--------~~~~l~~~l~~~gi~v~pg~~f~~~~~ 309 (330)
T TIGR01140 241 AWQAATRARLAAERARLAALLARLGGLEVVGGTA-LF--LLVRTP--------DAAALHEALARRGILIRDFDNFPGLDP 309 (330)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCceECCCCC-eE--EEEEcC--------CHHHHHHHHHHCCEEEEECCCCCCCCC
Confidence 33 4445566677888888888752222222112 22 345543 357899999999998643 3343 24
Q ss_pred CEEEEEccCCCCHHHHHHHHHHHH
Q 001586 943 GTLMIEPTESESKEELDRYCDALI 966 (1049)
Q Consensus 943 ~~lri~~t~~~t~eeid~fv~aL~ 966 (1049)
+++|++++. ..++ ++|+++|+
T Consensus 310 ~~iRi~~~~--~~~~-~~~~~~l~ 330 (330)
T TIGR01140 310 RYLRFALPT--DEEN-DRLEEALA 330 (330)
T ss_pred CEEEEEecC--HHHH-HHHHHhhC
Confidence 689999863 3345 88888763
No 446
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.50 E-value=1.3e-12 Score=153.76 Aligned_cols=222 Identities=16% Similarity=0.114 Sum_probs=143.1
Q ss_pred HHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHH-HH---hcCCEEEEEcCC
Q 001586 635 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT-AA---MCGMKIVSVGTD 710 (1049)
Q Consensus 635 ~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~-a~---~~G~~Vv~V~~d 710 (1049)
.++++.++++.|.+.. +..++|.+|..++++++. .++++||++...++..... .. ..|++++.++.
T Consensus 61 ~~Le~~lA~l~g~~~~-l~~ssG~~Ai~~al~al~--------~~Gd~Vl~~~~~Y~~t~~~~~~~l~~~gi~v~~~d~- 130 (425)
T PRK06084 61 DVLEQRVAALEGGVGA-LAVASGMAAITYAIQTIA--------EAGDNIVSVAKLYGGTYNLLAHTLPRIGIETRFAAH- 130 (425)
T ss_pred HHHHHHHHHHhCCCce-eEehhHHHHHHHHHHHHh--------CCCCEEEEeCCCcchHHHHHHHhcccceeEEEEECC-
Confidence 3788999999997653 556777776655544432 1467888876655432222 22 25778877775
Q ss_pred CCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CccccccccHHHHHHHHHHcCCEEEEeccccccccCcCCCCccCCcEEEe
Q 001586 711 AKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHL 789 (1049)
Q Consensus 711 ~~g~iD~~~L~~~i~~~~~~taaV~it~P-n~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~Pg~~GaDi~~~ 789 (1049)
.|+++|+++++ +++++|++++| |.+|.+. |+++|+++||++|+++++|+++.. +.+..|.++|+|+++.
T Consensus 131 ----~d~e~le~ai~---~~tklV~lesp~NPtG~v~-dl~~I~~la~~~~i~vVvD~a~a~--~~~~~p~~~gaDivv~ 200 (425)
T PRK06084 131 ----DDIAALEALID---ERTKAVFCESIGNPAGNII-DIQALADAAHRHGVPLIVDNTVAT--PVLCRPFEHGADIVVH 200 (425)
T ss_pred ----CCHHHHHHHhc---cCCcEEEEeCCCCCCCeec-CHHHHHHHHHHcCCEEEEECCCcc--cccCChhhcCCCEEEE
Confidence 48999999997 78999999999 5699887 799999999999999999998653 2345677889999999
Q ss_pred CCCcccccCCCCCCCceeEEEEccccc-ccCCCCc-cccCCCC--------CCCCC-----------CCCCCCCCccchh
Q 001586 790 NLHKTFCIPHGGGGPGMGPIGVKKHLA-PFLPSHP-VVSTGGI--------PAPEK-----------SQPLGTIAAAPWG 848 (1049)
Q Consensus 790 s~hK~f~~P~g~GGPg~G~i~~~~~l~-~~lpg~~-vg~t~~~--------~~~~~-----------~~~t~~i~sa~~g 848 (1049)
|+||+|+.+ |..-+|+++.+.... ....... .-.+.+. ...++ ...++..-
T Consensus 201 S~tK~l~G~---g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~l----- 272 (425)
T PRK06084 201 SLTKYIGGH---GTSIGGIVVDSGKFPWAEHKERFALLNTPDPSYHGVTYTEAFGPAAFIGRCRVVPLRNMGAAL----- 272 (425)
T ss_pred Cchhccccc---ccceeEEEEeCCccchhhccccccccccCCcccccchhhhhcchHHHHHHHHHHHHHhcCCCC-----
Confidence 999999522 222245555433211 0000000 0000000 00000 00011110
Q ss_pred hHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc
Q 001586 849 SALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH 889 (1049)
Q Consensus 849 ~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~ 889 (1049)
..--+++.+.|-+.+..+.++..++|..+++.|+++
T Consensus 273 -----~~~~a~l~lrgl~tl~~R~~~~~~na~~la~~L~~~ 308 (425)
T PRK06084 273 -----SPFNAFLILQGLETLALRMERHTENALKVARYLQQH 308 (425)
T ss_pred -----CHHHHHHHHcCcCcHHHHHHHHHHHHHHHHHHHHhC
Confidence 111345666677788888999999999999999986
No 447
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=99.50 E-value=3.6e-12 Score=151.12 Aligned_cols=251 Identities=13% Similarity=0.113 Sum_probs=160.0
Q ss_pred CCCEEEEcCCCCCccHHHHHhcCCEEEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEE-cC-Cccccccc--cHHHHHH
Q 001586 679 HRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVT-YP-STHGVYEE--GIDEICK 754 (1049)
Q Consensus 679 ~r~~VLip~saHg~~pa~a~~~G~~Vv~V~~d~~g~iD~~~L~~~i~~~~~~taaV~it-~P-n~~G~i~~--di~eI~~ 754 (1049)
++|.|+++...+..+...+++.|++++.+|++++| +|+++|+++++ +++++++++ +| |.+|.+-+ ..++|.+
T Consensus 164 pgd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~g-~~~~~l~~~~~---~~~k~i~~~p~p~NPTG~~~s~~~~~~l~~ 239 (431)
T PRK15481 164 PGDSVAVEDPCFLSSINMLRYAGFSASPVSVDAEG-MQPEKLERALA---QGARAVILTPRAHNPTGCSLSARRAAALRN 239 (431)
T ss_pred CCCEEEEeCCCcHHHHHHHHHcCCeEEeeccCCCC-CCHHHHHHHHh---cCCCEEEECCCCCCCCCccCCHHHHHHHHH
Confidence 56889999887766667788999999999997666 89999999997 577888876 78 46898762 2459999
Q ss_pred HHHHc-CCEEEEeccccccc-cCcCCC--CccCCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCC
Q 001586 755 IIHDN-GGQVYMDGANMNAQ-VGLTSP--GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGI 830 (1049)
Q Consensus 755 lah~~-G~ll~vD~A~~~a~-~gl~~P--g~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~ 830 (1049)
+|+++ +++++.|.++..-. .+...+ ....--+++.|+.|+|+ | |.++|+++.++++...+-..
T Consensus 240 la~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~-~----GlRiG~~i~~~~~~~~~~~~-------- 306 (431)
T PRK15481 240 LLARYPQVLVIIDDHFALLSSSPYHSVIPQTTQRWALIRSVSKALG-P----DLRLAFVASDSATSARLRLR-------- 306 (431)
T ss_pred HHHhcCCceEEecCchhhhccCCCCCCCcCCCCCEEEEeeeccccC-C----CceeEEEeCCHHHHHHHHHH--------
Confidence 99999 99999999763111 111111 11122367778888885 4 67899999887655443100
Q ss_pred CCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHch--hhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeEEEE
Q 001586 831 PAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGS--KGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIV 907 (1049)
Q Consensus 831 ~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~--eGl~~~~~~~~~~a~yL~~~L~~~-~~v~~~g~~g~~~~e~iv 907 (1049)
......+++ .....++..++.. |. +-+++..+...++.+++.+.|++. +.+.. +.+..+ +.+
T Consensus 307 ----~~~~~~~~s------~~~q~a~~~~l~~-~~~~~~l~~~~~~~~~~r~~~~~~L~~~~~~~~~--p~gg~f--~~~ 371 (431)
T PRK15481 307 ----LNSGTQWVS------HLLQDLVYACLTD-PEYQARLAQARLFYAQRRQKLARALQQYGIAIPS--PGDGLN--LWL 371 (431)
T ss_pred ----HhccccCCC------HHHHHHHHHHHhC-ccHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccc--CCCeEE--EEE
Confidence 000001111 1111222233321 21 113444555666777888888875 33221 223222 445
Q ss_pred eccCccccCCCCHHHHHHHHHHCCcccCC-CCCCC---CCEEEEEccCCCCHHHHHHHHHHHHHHH
Q 001586 908 DLRGLKNTAGIEPEDVAKRLMDYGFHGPT-MSWPV---PGTLMIEPTESESKEELDRYCDALISIR 969 (1049)
Q Consensus 908 ~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~-~~~p~---~~~lri~~t~~~t~eeid~fv~aL~~i~ 969 (1049)
+++ .+..++.++|.++|+.+.. ..|.. .+++||++... +.++++++++.|.+++
T Consensus 372 ~l~-------~~~~~~~~~l~~~gV~v~pg~~f~~~~~~~~iRis~~~~-~~~~i~~~~~~l~~~~ 429 (431)
T PRK15481 372 PLD-------TDSQATALTLAKSGWLVREGEAFGVSAPSHGLRITLSTL-NDAEINRLAADLHQAL 429 (431)
T ss_pred ECC-------CCHHHHHHHHHHCCcEEecCCccccCCCCCeEEEEcCCC-ChHHHHHHHHHHHHHh
Confidence 654 1457889999999998643 23421 36899999763 5889999999998775
No 448
>PRK08363 alanine aminotransferase; Validated
Probab=99.50 E-value=3.4e-12 Score=149.67 Aligned_cols=306 Identities=14% Similarity=0.072 Sum_probs=174.5
Q ss_pred hcHHHHHHHHHHHHHHhhCC--Ccccccc-CchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCEE
Q 001586 628 QGYQEMFNNLGEWLCTITGF--DSFSLQP-NAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKI 704 (1049)
Q Consensus 628 ~G~~~~i~el~~~la~l~G~--~~~~l~~-~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~V 704 (1049)
+|..++.+.+.+++....|. +...+.. +++++|...+ ++.+. .+++.|+++...+..+...++..|.++
T Consensus 70 ~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~---~~~~~-----~~gd~Vl~~~p~y~~~~~~~~~~g~~~ 141 (398)
T PRK08363 70 EGLPELREAIVKREKRKNGVDITPDDVRVTAAVTEALQLI---FGALL-----DPGDEILIPGPSYPPYTGLVKFYGGVP 141 (398)
T ss_pred CCcHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHH---HHHhC-----CCCCEEEEcCCCCcchHHHHHHcCCEE
Confidence 45555444444544444453 3334444 4444454333 33321 256889999887776766788899998
Q ss_pred EEE-cCCCC-CCCCHHHHHHHHHhcCCCeEEEEEEcCC-cccccc--ccHHHHHHHHHHcCCEEEEecccccc-ccC-cC
Q 001586 705 VSV-GTDAK-GNINIEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMNA-QVG-LT 777 (1049)
Q Consensus 705 v~V-~~d~~-g~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~--~di~eI~~lah~~G~ll~vD~A~~~a-~~g-l~ 777 (1049)
+.+ +.+++ +.+|+++|+++++ +++++|++++|+ .+|.+- .++++|+++|+++|+++++|+++..- .-+ ..
T Consensus 142 v~~~~~~~~~~~~d~~~l~~~~~---~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~a~~~~~~li~Deay~~~~~~~~~~ 218 (398)
T PRK08363 142 VEYRTIEEEGWQPDIDDIRKKIT---EKTKAIAVINPNNPTGALYEKKTLKEILDIAGEHDLPVISDEIYDLMTYEGKHV 218 (398)
T ss_pred EEeccccccCCcCCHHHHHhhCC---cceEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEhhhhhhhccCCccc
Confidence 888 55555 4799999999986 688999999995 589774 24999999999999999999985311 111 00
Q ss_pred CCCcc-CCc--EEEeCCCcccccCCCCCCCceeEEEE--cccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHH
Q 001586 778 SPGYI-GAD--VCHLNLHKTFCIPHGGGGPGMGPIGV--KKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALI 852 (1049)
Q Consensus 778 ~Pg~~-GaD--i~~~s~hK~f~~P~g~GGPg~G~i~~--~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~ 852 (1049)
....+ +.+ +++.|++|+|+.| |.++|++++ ++++...+-...... .. ...+.+...+.
T Consensus 219 ~~~~~~~~~~vi~~~SfSK~~~~~----GlRiG~~~~~~~~~~~~~l~~~~~~~---------~~--~~~~~s~~~q~-- 281 (398)
T PRK08363 219 SPGSLTKDVPVIVMNGLSKVYFAT----GWRLGYIYFVDPEGKLAEVREAIDKL---------AR--IRLCPNTPAQF-- 281 (398)
T ss_pred CHHHcCcCCcEEEEecchhccCCc----cceEEEEEEeCcHHHHHHHHHHHHHH---------hc--ccccCChHHHH--
Confidence 11111 112 4466788987543 678999997 443332211000000 00 00111111121
Q ss_pred HHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeEEEEeccCccccCCCCHHHH-HHHHHHCC
Q 001586 853 LPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDV-AKRLMDYG 931 (1049)
Q Consensus 853 ~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v-~k~L~~~G 931 (1049)
++..++.. ..+-+++..+...++.+++.+.|+++..+.+..+.+.++ +++.++.. ...+..++ .+.|.++|
T Consensus 282 --~~~~~l~~-~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~g~~~--~~~~l~~~---~~~~~~~~~~~~l~~~g 353 (398)
T PRK08363 282 --AAIAGLTG-PMDYLEEYMKKLKERRDYIYKRLNEIPGISTTKPQGAFY--IFPRIEEG---PWKDDKEFVLDVLHEAH 353 (398)
T ss_pred --HHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHhcCCCCEecCCCeEEE--EEEEeccC---CCCCHHHHHHHHHHhCC
Confidence 12222321 234455555666677888889887642222222223221 22344310 00133444 45567899
Q ss_pred cccC-CCCCCC--CCEEEEEccCCCCHHHHHHHHHHHHHHHHH
Q 001586 932 FHGP-TMSWPV--PGTLMIEPTESESKEELDRYCDALISIREE 971 (1049)
Q Consensus 932 i~~~-~~~~p~--~~~lri~~t~~~t~eeid~fv~aL~~i~~~ 971 (1049)
|.+. ...|+. .+++|+++. .+.++++..++.|++++++
T Consensus 354 V~v~~g~~f~~~~~~~iRis~~--~~~~~l~~~l~~l~~~~~~ 394 (398)
T PRK08363 354 VLFVHGSGFGEYGAGHFRLVFL--PPVEILEEAMDRFEEFMRE 394 (398)
T ss_pred EEEeCchhhCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHH
Confidence 9863 333432 478999985 4678888888888876544
No 449
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.50 E-value=9.1e-13 Score=153.34 Aligned_cols=284 Identities=18% Similarity=0.202 Sum_probs=175.7
Q ss_pred HHHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHH----HHhcCCEEEEEcC
Q 001586 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGT 709 (1049)
Q Consensus 634 i~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~----a~~~G~~Vv~V~~ 709 (1049)
..++++.++++.|.+. .+..++|.+|...++.++ . +++++|+++...++..... +...|+++..++.
T Consensus 53 ~~~le~~lA~l~g~~~-v~~~~gg~~Ai~~~l~al---l-----~~GD~Vl~~~p~y~~~~~~~~~~~~~~~~~v~~~d~ 123 (382)
T TIGR02080 53 RDLLQQALAELEGGAG-AVVTNTGMSAIHLVTTAL---L-----GPDDLLVAPHDCYGGTYRLLNALAKKGCFRVLFVDQ 123 (382)
T ss_pred HHHHHHHHHHHhCCCc-EEEEcCHHHHHHHHHHHH---c-----CCCCEEEEcCCCcHHHHHHHHHHHhhcCeEEEEECC
Confidence 3478899999999654 355666766664444433 1 2568899887766543322 2334667776653
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-ccccccccHHHHHHHHHHcCCEEEEeccccccccCcCCCCccCCcEEE
Q 001586 710 DAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1049)
Q Consensus 710 d~~g~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~Pg~~GaDi~~ 788 (1049)
.|+++++++++ ++|++|++++|+ .+|.+. |+++|+++||++|+++++|+++... ....|-..|+|+++
T Consensus 124 -----~d~~~l~~ai~---~~tklV~l~~p~NPtG~~~-dl~~I~~la~~~g~~vvvD~a~~~~--~~~~pl~~gaDivv 192 (382)
T TIGR02080 124 -----GDEQALRAALA---QKPKLVLIETPSNPLLRVV-DIAKICHLAKAVGAVVVVDNTFLSP--ALQNPLALGADLVL 192 (382)
T ss_pred -----CCHHHHHHhcC---cCceEEEEECCCCCCCEec-CHHHHHHHHHHcCCEEEEECCCccc--ccCCchhhCCCEEE
Confidence 48999999997 789999999995 589887 7999999999999999999986422 23356667999999
Q ss_pred eCCCcccccCCCCCCCceeEEEEcc-cccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhh
Q 001586 789 LNLHKTFCIPHGGGGPGMGPIGVKK-HLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (1049)
Q Consensus 789 ~s~hK~f~~P~g~GGPg~G~i~~~~-~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eG 867 (1049)
.|++|+++- .++-..|++.+++ ++.+.+.. . +. .++ .+.++. -+++...|-+-
T Consensus 193 ~S~sK~l~G---~~~~~~G~i~~~~~~~~~~l~~--~----------~~-~~g-~~~sp~---------~a~l~lr~l~t 246 (382)
T TIGR02080 193 HSCTKYLNG---HSDVIAGAVIAKDPQVAEELAW--W----------AN-NLG-VTGGAF---------DSYLTLRGLRT 246 (382)
T ss_pred eecceeccC---CCCceeEEEEeCCHHHHHHHHH--H----------HH-ccC-CCCCHH---------HHHHHHcccch
Confidence 999998841 1122378877753 34332210 0 00 011 121111 12344555666
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCC---eeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHHHCCcccCCCCCCCCCE
Q 001586 868 LTEASKIAILNANYMAKRLEKHYP---ILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGT 944 (1049)
Q Consensus 868 l~~~~~~~~~~a~yL~~~L~~~~~---v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~p~~~~ 944 (1049)
+..+.++..+|+..+++.|+++.. |.|++- . ..+..+++++.. .|+ ++.
T Consensus 247 l~~R~~~~~~na~~~a~~L~~~p~v~~V~yP~l---------------~---~~~~~~~~~~~~-~g~---------g~~ 298 (382)
T TIGR02080 247 LVARMRLQQRNAQAIVEYLQTQPLVKKIYYPGL---------------P---DHPGHEIAARQQ-KGF---------GAM 298 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCC---------------C---CCccHHHHHhhC-CCC---------Cce
Confidence 777778888999999999987632 334321 0 112345555532 221 233
Q ss_pred EEEEccCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccccCccccccchhh
Q 001586 945 LMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKVTCLFLHHGYFF 1000 (1049)
Q Consensus 945 lri~~t~~~t~eeid~fv~aL~~i~~~i~~i~~g~~~~~~~~l~~~ph~~~~~~~~ 1000 (1049)
+-|.+ ..+++++.+|++.|+-+. . |..-++.+.|...|.++.++.+.
T Consensus 299 ~s~~~--~~~~~~~~~f~~~l~~~~-~------~~s~G~~~sl~~~p~~~~~~~~~ 345 (382)
T TIGR02080 299 LSFEL--KGGEQTVRRFLGGLSLFT-L------AESLGGVESLIAHPATMTHAAMG 345 (382)
T ss_pred EEEEe--cCcHHHHHHHHHcCCcce-E------eccCCCCcceeECCCccCcccCC
Confidence 33333 345777888888886322 1 21223566777777666665543
No 450
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.50 E-value=2e-11 Score=143.68 Aligned_cols=312 Identities=13% Similarity=0.124 Sum_probs=176.0
Q ss_pred hcHHHHHHHHHHHHHHhhCC--CccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCEEE
Q 001586 628 QGYQEMFNNLGEWLCTITGF--DSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIV 705 (1049)
Q Consensus 628 ~G~~~~i~el~~~la~l~G~--~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~Vv 705 (1049)
+|..++...+.+++.+..|. +...+..++|++. +..++++.+. .++++|+++...+..+...+...|++++
T Consensus 74 ~G~~~lr~aia~~~~~~~g~~~~~~~I~it~G~~~--al~~~~~~l~-----~~gd~v~v~~P~y~~~~~~~~~~g~~~~ 146 (409)
T PLN00143 74 GGILPARRAIADYLSNDLPYQLSPDDVYLTLGCKH--AAEIIIKVLA-----RPEANILLPRPGFPDVETYAIFHHLEIR 146 (409)
T ss_pred CCCHHHHHHHHHHHHhhcCCCCCHhhEEEecChHH--HHHHHHHHHc-----CCCCEEEEcCCCCcCHHHHHHHcCCEEE
Confidence 46555555555555554454 3334555555442 2333344432 2568899988876666667888999999
Q ss_pred EEcCCC-C-CCCCHHHHHHHHHhcCCCeEEEEEEcCC-cccccc--ccHHHHHHHHHHcCCEEEEeccccc-cccCcC-C
Q 001586 706 SVGTDA-K-GNINIEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMN-AQVGLT-S 778 (1049)
Q Consensus 706 ~V~~d~-~-g~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~--~di~eI~~lah~~G~ll~vD~A~~~-a~~gl~-~ 778 (1049)
.++.+. + ..+|+++|+++++ ++++++++++|+ .+|.+- +.+++|.++|+++++++++|.++.. ...+-. .
T Consensus 147 ~~~~~~~~~~~~d~~~l~~~~~---~~~~~~~~~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~ 223 (409)
T PLN00143 147 HFDLLPEKGWEVDLDAVEAIAD---ENTIAMVIINPGNPCGSVYSYEHLNKIAETARKLGILVIADEVYGHIVFGSKPFV 223 (409)
T ss_pred EEeccCCCCCcCCHHHHHHhcc---cCCEEEEEECCCCCCCCccCHHHHHHHHHHHHHcCCeEEEEccccccccCCCCCc
Confidence 999852 3 4699999999886 678899999995 699874 2488999999999999999998642 111110 1
Q ss_pred C-CccCC--c-EEEeCCCcccccCCCCCCCceeEEEEc-c-cccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHH
Q 001586 779 P-GYIGA--D-VCHLNLHKTFCIPHGGGGPGMGPIGVK-K-HLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALI 852 (1049)
Q Consensus 779 P-g~~Ga--D-i~~~s~hK~f~~P~g~GGPg~G~i~~~-~-~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~ 852 (1049)
| ..+.. . |++.++.|+|++| |.++|++++. + .+.+.+. .... . .+.......++ ...
T Consensus 224 ~~~~~~~~~~vi~~~SfSK~f~~p----GlRvG~~v~~~p~~~~~~~~--~~~~-~-----~~~~~~~~~~~-----~~~ 286 (409)
T PLN00143 224 PMGLFASIVPVITLGSISKRWMIP----GWGLGWLVTCDPSGLLQICE--IADS-I-----KKALNPAPFPP-----TFI 286 (409)
T ss_pred chhhhcccCcEEEEccchhhcCCC----ccceEEEEeeCchhhhhhHH--HHHH-H-----HHHHhccCCCC-----chH
Confidence 1 11111 1 5667778887654 7899999883 2 2221100 0000 0 00000001111 111
Q ss_pred HHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeEEEEeccCccccCCC-CHHHHHHH-HHH
Q 001586 853 LPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGI-EPEDVAKR-LMD 929 (1049)
Q Consensus 853 ~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~-~~v~~~g~~g~~~~e~iv~~~~~~~~~g~-~~~~v~k~-L~~ 929 (1049)
..++..++...+.+-+.+..+...++.+++.+.|+++ .......+++..+ +.++++.... .+. +..+++.+ +.+
T Consensus 287 q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~p~gg~f--~w~~l~~~~~-~~~~~~~~~~~~ll~~ 363 (409)
T PLN00143 287 QAAIPEILEKTTEDFFSKTINILRAALAFCYDKLKEIPCIMCPQKAEGAFF--ALVKLNLLLL-EDIEDDMEFCLKLAKE 363 (409)
T ss_pred HHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCeeEE--EEEecchhhc-CCCCCHHHHHHHHHHh
Confidence 1112222221112234445555556667777888764 1111111222222 4456542100 011 34556554 467
Q ss_pred CCcccC-CCCCCCCCEEEEEccCCCCHHHHHHHHHHHHHHHHH
Q 001586 930 YGFHGP-TMSWPVPGTLMIEPTESESKEELDRYCDALISIREE 971 (1049)
Q Consensus 930 ~Gi~~~-~~~~p~~~~lri~~t~~~t~eeid~fv~aL~~i~~~ 971 (1049)
+|+.+. ...|...+++||+++ .+.+++++.++.|+++++.
T Consensus 364 ~gV~v~pg~~f~~~~~iRi~~~--~~~~~l~~al~rl~~~l~~ 404 (409)
T PLN00143 364 ESLIILPGVTVGLKNWLRITFA--VEQSSLEDGLGRLKSFCGR 404 (409)
T ss_pred CCEEEeCccccCCCCeEEEEEc--CCHHHHHHHHHHHHHHHHH
Confidence 899853 333545689999997 3578888888888776653
No 451
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.49 E-value=1.6e-13 Score=154.28 Aligned_cols=153 Identities=18% Similarity=0.243 Sum_probs=112.6
Q ss_pred HHHHHHHHHHHHhCCCCcceEeccchHHHHHHHHHHhhhccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc---
Q 001586 212 SLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--- 288 (1049)
Q Consensus 212 ~l~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a~~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~~--- 288 (1049)
.+.++|+.+|+++|++.+ +.+++|+|.+..++++++. . +||+|++++.+|+++...+.. .|++++++++
T Consensus 60 ~i~~~~~~~A~~~ga~~~-~~~~~Gst~a~~~~l~al~-~--~gd~Vlv~~~~h~s~~~~~~~----~g~~~~~v~~~~~ 131 (294)
T cd00615 60 PIKEAQELAARAFGAKHT-FFLVNGTSSSNKAVILAVC-G--PGDKILIDRNCHKSVINGLVL----SGAVPVYLKPERN 131 (294)
T ss_pred HHHHHHHHHHHHhCCCCE-EEEcCcHHHHHHHHHHHcC-C--CCCEEEEeCCchHHHHHHHHH----CCCEEEEecCccC
Confidence 577899999999998753 2246888888888877652 3 899999999999999988753 4777766543
Q ss_pred -----------chhhc-c--CCCEeEEEEEcCCCCeeeccHHHHHHHHHhCCcEEEEEeccccc-----cCC-CCCCccc
Q 001586 289 -----------KDIDY-K--SGDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLAL-----TIL-KPPGELG 348 (1049)
Q Consensus 289 -----------~~l~~-l--~~~t~~V~v~~pn~~G~i~di~~I~~~ah~~galliV~a~~~al-----g~l-~~p~~~G 348 (1049)
+++++ + .+++++|++++||++|.+.|+++|+++||++|++++|+. .++. +.+ ....++|
T Consensus 132 ~~~~~~~~i~~~~l~~~l~~~~~~k~v~l~~p~~~G~~~dl~~I~~~~~~~g~~livDe-A~~~~~~~~~~~~~~~~~~~ 210 (294)
T cd00615 132 PYYGIAGGIPPETFKKALIEHPDAKAAVITNPTYYGICYNLRKIVEEAHHRGLPVLVDE-AHGAHFRFHPILPSSAAMAG 210 (294)
T ss_pred cccCcCCCCCHHHHHHHHHhCCCceEEEEECCCCCCEecCHHHHHHHHHhcCCeEEEEC-cchhhhccCcccCcchhhcC
Confidence 33444 4 357899999999999999999999999999999999942 2221 111 1234579
Q ss_pred ceEEEecC-ccccccCCCCCCceEEEEEchh
Q 001586 349 ADIVVGSA-QRFGVPMGYGGPHAAFLATSQE 378 (1049)
Q Consensus 349 aDivvgs~-k~lg~P~~~GGP~~G~l~~~~~ 378 (1049)
+|++++|+ |++++| +++|+++++++
T Consensus 211 ~div~~S~hK~l~g~-----~~~~~l~~~~~ 236 (294)
T cd00615 211 ADIVVQSTHKTLPAL-----TQGSMIHVKGD 236 (294)
T ss_pred CcEEEEchhcccchH-----hHHHHHHhCCC
Confidence 99999999 655432 23456655543
No 452
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.49 E-value=4.2e-12 Score=133.22 Aligned_cols=303 Identities=17% Similarity=0.214 Sum_probs=185.8
Q ss_pred HHHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCEEEEEcCC--C
Q 001586 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTD--A 711 (1049)
Q Consensus 634 i~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~Vv~V~~d--~ 711 (1049)
|..+.+.|++.+|+|.+.+. ++.-.|-++.+-++. .++|-|++...+|-+..-+|+..|++|..||-. +
T Consensus 63 I~~F~~dlaeFlg~D~~R~t-~GARe~KfavMhal~--------~~gd~vV~D~~aHYttyvAAEragl~v~eVp~tg~P 133 (382)
T COG1103 63 IKDFLEDLAEFLGMDEVRVT-AGAREAKFAVMHALC--------KEGDWVVVDSLAHYTTYVAAERAGLNVAEVPNTGYP 133 (382)
T ss_pred HHHHHHHHHHHhCCceeeec-ccchhhHHHHHHHhc--------cCCCEEEEcCcchHHHHHHHHhcCCeEEecCCCCCC
Confidence 55677789999999986542 222234454444432 257888899999988777899999999999953 3
Q ss_pred CCCCCHHHHHHHHHhcC----CCeEEEEEEcCC-ccccccccHHHHHHHHHHcCCEEEEeccccccccCcCCCCccCCcE
Q 001586 712 KGNINIEELRKAAEANR----DNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADV 786 (1049)
Q Consensus 712 ~g~iD~~~L~~~i~~~~----~~taaV~it~Pn-~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~Pg~~GaDi 786 (1049)
+..++++...+.|++.. +.+++..+|+|. .+|.+. |.+.++++|+++|+++++.+|+..+-... +--+.|+|+
T Consensus 134 ey~i~~e~y~~viee~~~~~g~~~~lallTh~Dg~YGNl~-Dakkva~ic~e~gvPlllN~AYt~Grmpv-s~ke~g~DF 211 (382)
T COG1103 134 EYKITPEGYAEVIEEVKDEGGDPPALALLTHVDGEYGNLA-DAKKVAKICREYGVPLLLNCAYTVGRMPV-SGKEIGADF 211 (382)
T ss_pred ceEecHHHHHHHHHHHHhccCCCceEEEEeccCCCcCCch-hhHHHHHHHHHcCCceEeecceeeccccc-cccccCCCE
Confidence 46899999988886542 447888899995 599997 89999999999999999999875443332 334679999
Q ss_pred EEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCC-CCCCCCCccchhhHHHHHHH-HHHHHHHc
Q 001586 787 CHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKS-QPLGTIAAAPWGSALILPIS-YTYIAMMG 864 (1049)
Q Consensus 787 ~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~-~~t~~i~sa~~g~~~~~~~a-~a~l~~lG 864 (1049)
+++|.||+++. .| .+|+++.++++.+..--++ |.. . ..++ .-.+ |+ ..|.+.+..+| .-+..
T Consensus 212 iVgSGHKsmAA----s~-PiGvl~~~eE~ae~V~r~S-g~~---~-~~KEvellG--CT-~rGapivTlmASfP~V~--- 275 (382)
T COG1103 212 IVGSGHKSMAA----SA-PIGVLAMSEEWAEIVLRRS-GRA---F-PKKEVELLG--CT-VRGAPIVTLMASFPHVV--- 275 (382)
T ss_pred EEecCccchhc----cC-CeeEEeehhHHHHHHHhhc-ccc---c-ccceeeeec--cc-ccCchHHHHHhcCHHHH---
Confidence 99999998863 23 3678998887665421111 000 0 0011 0112 32 12333332221 11111
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhcc--CCeeeccCCCceeeEE-EEeccCcc---ccCCCCHHHHHHHHHHCCcccCCCC
Q 001586 865 SKGLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEF-IVDLRGLK---NTAGIEPEDVAKRLMDYGFHGPTMS 938 (1049)
Q Consensus 865 ~eGl~~~~~~~~~~a~yL~~~L~~~--~~v~~~g~~g~~~~e~-iv~~~~~~---~~~g~~~~~v~k~L~~~Gi~~~~~~ 938 (1049)
+-. ++=...+++++|+.+.|+++ +..+ |. .|.-|.. -|..+.|- +.......-+.+.|.++||+.- .
T Consensus 276 -eRV-krWdeEv~kaR~fv~elEkigg~~ql--G~-rPk~HdLm~Fetp~f~eIakk~~r~gyFlY~ELK~RgI~GI--~ 348 (382)
T COG1103 276 -ERV-KRWDEEVEKARWFVAELEKIGGVKQL--GE-RPKNHDLMKFETPVFHEIAKKHKRKGYFLYEELKKRGIHGI--Q 348 (382)
T ss_pred -HHH-HHHHHHHHHHHHHHHHHHHhhhHHHh--CC-CCcccceeeecCchHHHHHHhCcCCceeeHHHHHhcCcccc--c
Confidence 111 12234668899999999986 3322 32 1222222 23332210 0000111224456667777631 1
Q ss_pred CCCCCEEEEEccCCCCHHHHHHHHHHHHHHHHH
Q 001586 939 WPVPGTLMIEPTESESKEELDRYCDALISIREE 971 (1049)
Q Consensus 939 ~p~~~~lri~~t~~~t~eeid~fv~aL~~i~~~ 971 (1049)
......+-+++ ...+.|+++..++++++|+++
T Consensus 349 ~G~Tk~~K~sv-yGl~~Eqve~V~~afkeI~ek 380 (382)
T COG1103 349 PGQTKYFKLSV-YGLSWEQVEYVVDAFKEIAEK 380 (382)
T ss_pred cCceeEEEEEe-ecCCHHHHHHHHHHHHHHHHh
Confidence 01123444443 456899999999999999875
No 453
>PLN02271 serine hydroxymethyltransferase
Probab=99.49 E-value=2.3e-12 Score=151.41 Aligned_cols=290 Identities=12% Similarity=0.034 Sum_probs=187.8
Q ss_pred HHHHHHHHhCCCC----cceEeccchHHHHHHHHHHhhhccCCCCEEEEcCCCCHHHHHHHH-----HhhcCCCeEEEEe
Q 001586 216 FQTMIADLTGLPM----SNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICI-----TRADGFDIKVVVS 286 (1049)
Q Consensus 216 ~q~~ia~L~G~~~----~n~sl~~~~Ta~~eA~~~a~~~~~~~g~~Vlv~~~~Hps~~~~l~-----~~a~~~gi~v~~v 286 (1049)
+++...+|+|++. +|+-.+ +|+.|..++.+|+ +. +||+|+..+..|+..+.... ..+...|+.+..+
T Consensus 199 a~era~~lF~~~~~~~gaNVQp~-SGs~AN~aV~~AL-l~--PGD~IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~v 274 (586)
T PLN02271 199 CCERALAAFGLDSEKWGVNVQPY-SCTSANFAVYTGL-LL--PGDRIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESL 274 (586)
T ss_pred HHHHHHHHhCCcccccccceeec-cHHHHHHHHHHHh-cC--CCCEEEEecCCCCCchhcccccccccccccccceEEEE
Confidence 4577889999887 787777 6677777777776 33 89999999988876655321 1123345554443
Q ss_pred C-----------cchhhc--cCCCEeEEEEEcCCCCeeeccHHHHHHHHHhCCcEEEEE-eccccccCC-----CCCCcc
Q 001586 287 D-----------LKDIDY--KSGDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMA-TDLLALTIL-----KPPGEL 347 (1049)
Q Consensus 287 ~-----------~~~l~~--l~~~t~~V~v~~pn~~G~i~di~~I~~~ah~~galliV~-a~~~alg~l-----~~p~~~ 347 (1049)
+ ++++++ ...++++|++....+. ...|+++|.++|+++|++++|+ +| ..|++ ..|..
T Consensus 275 pY~~d~~~g~IDyd~lek~a~~~rPKLII~g~Sayp-r~~D~~~i~eIAdevGA~LmvD~AH--~aGLIa~g~~~sP~~- 350 (586)
T PLN02271 275 PYKVNPQTGYIDYDKLEEKALDFRPKILICGGSSYP-REWDYARFRQIADKCGAVLMCDMAH--ISGLVAAKECVNPFD- 350 (586)
T ss_pred EcccccccCccCHHHHHHHhhhcCCeEEEECchhcc-CcCCHHHHHHHHHHcCCEEEEECcc--cccccccCcCCCCCc-
Confidence 3 345554 4678999988665443 6679999999999999999994 44 33433 23433
Q ss_pred cceEEEecC-ccccccCCCCCCceEEEEEchhHHhcCCCceeeeeecCCCCcceeeecccccccccccccCCCccchhHH
Q 001586 348 GADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQAL 426 (1049)
Q Consensus 348 GaDivvgs~-k~lg~P~~~GGP~~G~l~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irrekaTsni~t~~~l 426 (1049)
+|||+++++ |+|.+| ..|+++++++....+.|...+++.+.. .+.+.-.+ .+.-.-..+.|+.| ..+
T Consensus 351 ~aDvvt~TTHKtLrGP------rGG~I~~r~~~~~~~~g~~gs~s~~~~-~~d~~~kI-~~aVfPglqgGphn----~~I 418 (586)
T PLN02271 351 YCDIVTSTTHKSLRGP------RGGIIFYRKGPKLRKQGMLLSHGDDNS-HYDFEEKI-NFAVFPSLQGGPHN----NHI 418 (586)
T ss_pred CCcEEEeCCcccCCCC------CceEEEecccccccccCCccccccccc-cHHHHHHh-hcccCCccccChhH----HHH
Confidence 699999999 777655 446788887766666666655542210 00000000 00000022334444 235
Q ss_pred HHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEcCC-CCcceEEEecCC----HHHHHHHHHHcCCeeee
Q 001586 427 LANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL-PFFDTVKVKCAD----AHAIASAAYKIEMNLRV 501 (1049)
Q Consensus 427 ~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~g~~~v~~~-~~~~~v~i~~~~----~~~v~~~L~~~gI~~~~ 501 (1049)
.|+..++ .+.....+++-++++.++|+.|++.|.+.| ++++.. ..-+.|.+++.. ...+.+.|.+.||.+.+
T Consensus 419 AalAval--kea~~~efk~Ya~QVv~NAkaLA~~L~~~G-~~vv~ggTdnHlvLvDl~~~g~~G~~ae~~Le~~~I~~Nk 495 (586)
T PLN02271 419 AALAIAL--KQVATPEYKAYMQQVKKNAQALASALLRRK-CRLVTGGTDNHLLLWDLTTLGLTGKNYEKVCEMCHITLNK 495 (586)
T ss_pred HHHHHHH--HHHhChHHHHHHHHHHHHHHHHHHHHHHCC-CeEeeCCCCcceeeecCcccCCCHHHHHHHHHHcCeEecc
Confidence 5555554 333344568899999999999999999988 999843 333456666532 56777788888997643
Q ss_pred ---------ecCCeEEEEeccCCCH----HHHHHHHHHHh
Q 001586 502 ---------VDSNTVTASFDETTTL----EDVDKLFIVFA 528 (1049)
Q Consensus 502 ---------~~~~~vris~~~~~t~----edid~lv~aL~ 528 (1049)
..++.||+...+.+++ +|++.+.+.+.
T Consensus 496 n~iP~d~~~~~psGiRiGT~alT~rG~~e~d~~~iA~~i~ 535 (586)
T PLN02271 496 TAIFGDNGTISPGGVRIGTPAMTSRGCLESDFETIADFLL 535 (586)
T ss_pred ccCCCCCCCCCCCcccccCHHHHhcCCCcHHHHHHHHHHH
Confidence 2356799998887664 67777766664
No 454
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=99.49 E-value=1.4e-11 Score=144.79 Aligned_cols=296 Identities=13% Similarity=0.110 Sum_probs=169.1
Q ss_pred HHHHHHHHhhCC------Ccccc-ccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCEEEEEc
Q 001586 636 NLGEWLCTITGF------DSFSL-QPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVG 708 (1049)
Q Consensus 636 el~~~la~l~G~------~~~~l-~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~Vv~V~ 708 (1049)
++++.+++++|. +...+ ..+++++|.. ++++.+. .++++|+++...+......+...|++++.++
T Consensus 77 ~lr~~ia~~l~~~~~~~~~~~~ii~t~G~t~al~---~~~~~l~-----~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~ 148 (403)
T TIGR01265 77 AAREAVAEYLSSDLPGKLTADDVVLTSGCSQAIE---ICIEALA-----NPGANILVPRPGFPLYDTRAAFSGLEVRLYD 148 (403)
T ss_pred HHHHHHHHHHHhhcCCCCCHHHEEEecChHHHHH---HHHHHhC-----CCCCEEEEeCCCchhHHHHHHHcCCEEEEec
Confidence 445556666553 22233 4444454443 3344331 2567899988766555556778999999998
Q ss_pred CCC--CCCCCHHHHHHHHHhcCCCeEEEEEEcCC-cccccc--ccHHHHHHHHHHcCCEEEEeccccccc-cCcC-CC-C
Q 001586 709 TDA--KGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQ-VGLT-SP-G 780 (1049)
Q Consensus 709 ~d~--~g~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~--~di~eI~~lah~~G~ll~vD~A~~~a~-~gl~-~P-g 780 (1049)
.+. ++.+|+++++++++ +++++|++++|+ .+|.+- +++++|.++|+++|+++++|+++..-. .+-. .+ .
T Consensus 149 ~~~~~~~~~d~~~l~~~~~---~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~ 225 (403)
T TIGR01265 149 LLPEKDWEIDLDGLEALAD---EKTVAIVVINPSNPCGSVFSRDHLQKIAEVARKLGIPIIADEIYGHMVFGDAPFIPMA 225 (403)
T ss_pred CCcccCCccCHHHHHHHhC---cCccEEEEecCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCccchh
Confidence 753 46799999999886 688999999995 599874 248999999999999999999853211 1100 01 1
Q ss_pred ccC--Cc-EEEeCCCcccccCCCCCCCceeEEEEcc--c-----ccccCCCCccccCCCCCCCCCCCCCCCCCccchhhH
Q 001586 781 YIG--AD-VCHLNLHKTFCIPHGGGGPGMGPIGVKK--H-----LAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSA 850 (1049)
Q Consensus 781 ~~G--aD-i~~~s~hK~f~~P~g~GGPg~G~i~~~~--~-----l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~ 850 (1049)
.+. .. |++.|+.|+|+.| |-++|++.+.. . +...+... .. ...+.+ ...+
T Consensus 226 ~~~~~~~vi~~~S~SK~~~~p----GlRiG~~v~~~~~~~~~~~~~~~~~~~------------~~-~~~~~~--~~~q- 285 (403)
T TIGR01265 226 SFASIVPVLSLGGISKRWVVP----GWRLGWIIIHDPHGIFRDTVLQGLKNL------------LQ-RILGPA--TIVQ- 285 (403)
T ss_pred hhccCCcEEEEeecccccCCC----cceEEEEEEeCchhhhHHHHHHHHHHH------------hh-hhcCCC--hHHH-
Confidence 111 12 4566788887544 67799998742 2 11111000 00 001111 1111
Q ss_pred HHHHHHHHHHHHHchhh-HHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHH-H
Q 001586 851 LILPISYTYIAMMGSKG-LTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRL-M 928 (1049)
Q Consensus 851 ~~~~~a~a~l~~lG~eG-l~~~~~~~~~~a~yL~~~L~~~~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L-~ 928 (1049)
.++..++.. +.+. +++..++..++.+++.+.|+.+..+.+..+.+..+ +.++++.-......+..+++++| .
T Consensus 286 ---~~~~~~l~~-~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~g~f--~~~~~~~~~~~~~~~~~~~~~~l~~ 359 (403)
T TIGR01265 286 ---GALPDILEN-TPQEFFDGKISVLKSNAELCYEELKDIPGLVCPKPEGAMY--LMVKLELELFPEIKDDVDFCEKLVR 359 (403)
T ss_pred ---HHHHHHHHh-ChHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCceeE--EEEeccccccCCCCCHHHHHHHHHH
Confidence 112223322 2223 33445566677888989887642222222222221 44555310000012567888886 5
Q ss_pred HCCcccC-CCCCCCCCEEEEEccCCCCHHHHHHHHHHHHHHHH
Q 001586 929 DYGFHGP-TMSWPVPGTLMIEPTESESKEELDRYCDALISIRE 970 (1049)
Q Consensus 929 ~~Gi~~~-~~~~p~~~~lri~~t~~~t~eeid~fv~aL~~i~~ 970 (1049)
++|+.+. .-.|...+++||++.. .++.++..++.|.++++
T Consensus 360 ~~gv~v~pg~~f~~~~~iRis~~~--~~~~l~~~l~~l~~~~~ 400 (403)
T TIGR01265 360 EESVICLPGSAFGLPNWVRITITV--PESMLEEACSRIKEFCE 400 (403)
T ss_pred hCCEEEeCccccCCCCeEEEEecC--CHHHHHHHHHHHHHHHH
Confidence 7899864 2234346899999974 46667777776666553
No 455
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.49 E-value=3.9e-12 Score=148.33 Aligned_cols=289 Identities=14% Similarity=0.114 Sum_probs=179.1
Q ss_pred HHHHHHHHHHHhCCCCcceEeccchHHHHHHHHHHhhhccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCcc---
Q 001586 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK--- 289 (1049)
Q Consensus 213 l~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a~~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~~~--- 289 (1049)
..++++.+++++|.+. +..+.+||++...++.++... +||+||++...|+++...++ ..|++++++|++
T Consensus 31 ~~~le~~la~~~g~~~--~v~~~sgt~al~~~l~al~~~--~Gd~Viv~~~~~~~~~~~~~----~~G~~~~~~~~~~~~ 102 (380)
T TIGR03588 31 VPAFEEALAEYVGAKY--AVAFNSATSALHIACLALGVG--PGDRVWTTPITFVATANCAL----YCGAKVDFVDIDPDT 102 (380)
T ss_pred HHHHHHHHHHHHCCCe--EEEEcCHHHHHHHHHHHcCCC--CCCEEEeCCcchHHHHHHHH----HcCCEEEEEecCCCc
Confidence 3557789999999864 556678888777766665433 88999999999999887754 468888887652
Q ss_pred ------hhhc-cC----CCEeEEEEEcCCCCeeeccHHHHHHHHHhCCcEEEEEeccccccCCCCCCcccc----eEEEe
Q 001586 290 ------DIDY-KS----GDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGA----DIVVG 354 (1049)
Q Consensus 290 ------~l~~-l~----~~t~~V~v~~pn~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~p~~~Ga----Divvg 354 (1049)
++++ ++ ++|++|++++ ++|...|+++|.++|+++|+++++++ .+++|.......+|. |+++.
T Consensus 103 ~~~d~~~l~~~i~~~~~~~t~~v~~~~--~~G~~~~~~~i~~l~~~~~~~lI~D~-a~a~g~~~~~~~~g~~~~~d~~~~ 179 (380)
T TIGR03588 103 GNIDEDALEKKLAAAKGKLPKAIVPVD--FAGKSVDMQAIAALAKKHGLKIIEDA-SHALGAEYGGKPVGNCRYADATVF 179 (380)
T ss_pred CCcCHHHHHHHhhcccCCCceEEEEeC--CCCccCCHHHHHHHHHHcCCEEEEEC-CCcccCccCCEeCCCccccceEEE
Confidence 3444 66 6889988766 47999999999999999999999943 445553322334555 99999
Q ss_pred cC---ccccccCCCCCCceEEEEE-chhHHhcCCC-ceeeeeecCCCCcceeeecccccccccccccCCCccchhHHHHH
Q 001586 355 SA---QRFGVPMGYGGPHAAFLAT-SQEYKRMMPG-RIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLAN 429 (1049)
Q Consensus 355 s~---k~lg~P~~~GGP~~G~l~~-~~~l~~~lpg-rivG~s~d~~g~~~~~l~lqtreq~irrekaTsni~t~~~l~a~ 429 (1049)
|. |.++.+ .+|++.+ ++++.+++.. +..|...+... ....+ +...+.+..+ +..+..+..+
T Consensus 180 S~~~~K~~~~~------~GG~v~~~~~~~~~~~~~~~~~g~~~~~~~----~~~~~--~~~~~~~~~~--~g~n~~m~~l 245 (380)
T TIGR03588 180 SFHPVKIITTA------EGGAVTTNDEELAERMRLLRSHGITKDPLL----FEKQD--EGPWYYEQQE--LGFNYRMTDI 245 (380)
T ss_pred ecCCCCccccc------CceEEEECCHHHHHHHHHHHHCCCCCCccc----ccccc--cCcceeeeec--cccccCccHH
Confidence 96 445322 2344544 4555544421 11121111100 00000 0000111111 0001112222
Q ss_pred HHHHHHHHhCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEcCCC-------CcceEEEecC---CHHHHHHHHHHcCCee
Q 001586 430 MAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLP-------FFDTVKVKCA---DAHAIASAAYKIEMNL 499 (1049)
Q Consensus 430 ~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~g~~~v~~~~-------~~~~v~i~~~---~~~~v~~~L~~~gI~~ 499 (1049)
.|++-+.. -+.++++.++-.++++++.+.|.++++++++..+ ..-.+.+... ...++.+.|.++||.+
T Consensus 246 ~aa~g~~q--L~~l~~~~~~r~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~r~~l~~~L~~~gI~~ 323 (380)
T TIGR03588 246 QAALGLSQ--LKKLDRFVAKRREIAARYDRLLKDLPYFTPLTIPLGSKSAWHLYPILLDQEFGCTRKEVFEALRAAGIGV 323 (380)
T ss_pred HHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCEeEEEEEEEEECCcCCCCHHHHHHHHHHCCCCc
Confidence 33331111 2346788888899999999999988646644321 1112333321 2678999999999965
Q ss_pred eee-------------------------cCCeEEEEeccCCCHHHHHHHHHHHh
Q 001586 500 RVV-------------------------DSNTVTASFDETTTLEDVDKLFIVFA 528 (1049)
Q Consensus 500 ~~~-------------------------~~~~vris~~~~~t~edid~lv~aL~ 528 (1049)
+.. ....+.+.++...|++|+++++++|+
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~dv~~i~~~l~ 377 (380)
T TIGR03588 324 QVHYIPVHLQPYYRQGFGDGDLPSAENFYLAEISLPLHPALTLEQQQRVVETLR 377 (380)
T ss_pred ccCCcccccChhhhccCCcCCCcHHHHHHhceEEcCCCCCCCHHHHHHHHHHHH
Confidence 311 01568899999999999999999986
No 456
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.48 E-value=2.1e-11 Score=142.07 Aligned_cols=305 Identities=11% Similarity=0.091 Sum_probs=182.9
Q ss_pred cCCCCCCCCCcHHHHHHHHhC--CccccccCCChhhHhhhHHHHHHHHHHHHHHHhCCCCcceEeccchHHHHHHHHHHh
Q 001586 171 IGMGYYNTHVPPVILRNIMEN--PAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCN 248 (1049)
Q Consensus 171 lG~g~y~~~~p~~i~~~~~~~--~~~~t~ytpyq~e~sqg~le~l~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a~ 248 (1049)
+|.|-.+...|+.+.+.+.+- ..+++.|.+. +| ..++++.+|+++|.++.++.+++|+|.+...++.++
T Consensus 33 l~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~-----~g----~~~lr~~ia~~l~~~~~~v~~~~g~t~al~~~~~~~ 103 (380)
T PRK06225 33 MGQNTNHLGPHEEVREAMIRCIEEGEYCKYPPP-----EG----FPELRELILKDLGLDDDEALITAGATESLYLVMRAF 103 (380)
T ss_pred ccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCC-----cc----hHHHHHHHHHhcCCCCCcEEEeCCHHHHHHHHHHHh
Confidence 355655555566665444321 1223444322 22 456788999999999999999999997766555443
Q ss_pred hhccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc-----------chhhc-cCCCEeEEEEEcC-CCCeeec--
Q 001586 249 NIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL-----------KDIDY-KSGDVCGVLVQYP-GTEGEVL-- 313 (1049)
Q Consensus 249 ~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~~-----------~~l~~-l~~~t~~V~v~~p-n~~G~i~-- 313 (1049)
. ++|++|++++..|+.....+ +..|.+++.++. +++++ +++++++|++.+| |++|.+.
T Consensus 104 ~---~~gd~vl~~~p~y~~~~~~~----~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NptG~~~~~ 176 (380)
T PRK06225 104 L---SPGDNAVTPDPGYLIIDNFA----SRFGAEVIEVPIYSEECNYKLTPELVKENMDENTRLIYLIDPLNPLGSSYTE 176 (380)
T ss_pred c---CCCCEEEEcCCCCcchHHHH----HHhCceEEeeccccccCCccCCHHHHHhhcCCCceEEEEeCCCCCCCcCCCH
Confidence 2 37899999998887655443 345777776654 23444 6778999988888 6899874
Q ss_pred -cHHHHHHHHHhCCcEEEEEeccc--cccCCCCCC--cccceEEEecC-ccccccCCCCCCceEEEEEchhHHhcCCCce
Q 001586 314 -DYGDFIKNAHANGVKVVMATDLL--ALTILKPPG--ELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRI 387 (1049)
Q Consensus 314 -di~~I~~~ah~~galliV~a~~~--alg~l~~p~--~~GaDivvgs~-k~lg~P~~~GGP~~G~l~~~~~l~~~lpgri 387 (1049)
++++|+++|+++|++++++.-.. ..+.. +.. .-...+++.|. |.||.| |-..|++++++++.+.+....
T Consensus 177 ~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~-~~~~~~~~~~i~~~s~SK~~g~~----G~RiG~i~~~~~l~~~~~~~~ 251 (380)
T PRK06225 177 EEIKEFAEIARDNDAFLLHDCTYRDFAREHT-LAAEYAPEHTVTSYSFSKIFGMA----GLRIGAVVATPDLIEVVKSIV 251 (380)
T ss_pred HHHHHHHHHHHHCCcEEEEehhHHHHhccCC-chhhcCCCCEEEEeechhhcCCc----cceeEEEecCHHHHHHHHHHH
Confidence 59999999999999999943110 01100 001 11345677775 877432 334799999888776542100
Q ss_pred eeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHhhcCCCe
Q 001586 388 VGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTV 467 (1049)
Q Consensus 388 vG~s~d~~g~~~~~l~lqtreq~irrekaTsni~t~~~l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~g~~ 467 (1049)
+...+++....+ ++...+.. ..+=++++.+...++.+++.+.|+++.++
T Consensus 252 -----------------------------~~~~~~~~~~~~-~a~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 300 (380)
T PRK06225 252 -----------------------------INDLGTNVIAQE-AAIAGLKV-KDEWIDRIRRTTFKNQKLIKEAVDEIEGV 300 (380)
T ss_pred -----------------------------hcccCCCHHHHH-HHHHHHhc-chHHHHHHHHHHHHHHHHHHHHHHhCcCC
Confidence 001111111111 11111111 11123455555566677788888875224
Q ss_pred EEc-CCCCcceEEEecC----CHHHHHHHHHHcCCeeeee-------cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001586 468 EVQ-GLPFFDTVKVKCA----DAHAIASAAYKIEMNLRVV-------DSNTVTASFDETTTLEDVDKLFIVFAG 529 (1049)
Q Consensus 468 ~v~-~~~~~~~v~i~~~----~~~~v~~~L~~~gI~~~~~-------~~~~vris~~~~~t~edid~lv~aL~~ 529 (1049)
.+. .++...-+.+.++ +..++.++|.++||.+... ..+.+|+|+.. ++||+++++++|+.
T Consensus 301 ~~~~~~~~g~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~g~~~~~~~~~~~iR~s~~~--~~e~l~~~~~~l~~ 372 (380)
T PRK06225 301 FLPVYPSHGNMMVIDISEAGIDPEDLVEYLLERKIFVRQGTYTSKRFGDRYIRVSFSI--PREQVEVFCEEFPD 372 (380)
T ss_pred ccccCCCCCeEEEEEcccccCCHHHHHHHHHHCCEEEcCCcccCcCCCCceEEEEeCC--CHHHHHHHHHHHHH
Confidence 321 1111112333332 2678999999999987542 13589999864 78999999999963
No 457
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.48 E-value=2e-11 Score=142.14 Aligned_cols=264 Identities=18% Similarity=0.211 Sum_probs=165.5
Q ss_pred ccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEE-EcCCCCCccHHHHHhcCCEE---------EEEcCCCCCCCCHHHH
Q 001586 651 SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGMKI---------VSVGTDAKGNINIEEL 720 (1049)
Q Consensus 651 ~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VL-ip~saHg~~pa~a~~~G~~V---------v~V~~d~~g~iD~~~L 720 (1049)
.++.+||+++++++++.+|.| . ++++|| +..+.||+....+...|.+. ..++.. -..|++++
T Consensus 87 ~~~~~SGseA~~~Al~~ar~~---~---~~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~dl~~l 158 (375)
T PRK04260 87 AFFCNSGAEANEAAIKIARKA---T---GKQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHFSYA--IFNDLNSV 158 (375)
T ss_pred EEEcCccHHHHHHHHHHHHHh---c---CCCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCeEEe--CCCCHHHH
Confidence 467889999998888887765 1 345565 56788987655543322211 111110 12489999
Q ss_pred HHHHHhcCCCeEEEEEEcCC-ccccccc---cHHHHHHHHHHcCCEEEEeccccccccCcCCCC---c--cCCcEEEeCC
Q 001586 721 RKAAEANRDNLSTLMVTYPS-THGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPG---Y--IGADVCHLNL 791 (1049)
Q Consensus 721 ~~~i~~~~~~taaV~it~Pn-~~G~i~~---di~eI~~lah~~G~ll~vD~A~~~a~~gl~~Pg---~--~GaDi~~~s~ 791 (1049)
+++++ +++++|+++.++ ..|++.+ .+++|.++|+++|+++++|+++. +++--..+. . ..+|++++
T Consensus 159 ~~~l~---~~~a~vi~e~v~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~-g~g~~g~~~~~~~~~~~pdi~t~-- 232 (375)
T PRK04260 159 KALVN---KNTAAVMLELVQGESGVLPADKDFVKALADYCQETGILLIVDEVQT-GMGRTGKLYAFEHYGIEPDIFTL-- 232 (375)
T ss_pred HHhcC---CCeEEEEECCeECCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-CCCcccchhhhHhhCCCCCEEEe--
Confidence 99886 688999998874 5788753 38999999999999999999863 222111111 1 24677654
Q ss_pred CcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHH
Q 001586 792 HKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEA 871 (1049)
Q Consensus 792 hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~ 871 (1049)
.|.|+ +|-.+|++++++++.+.+... . ..+. +.++++.+.++.+.|..+..+++.+
T Consensus 233 sK~l~-----~G~~ig~~~~~~~~~~~~~~~------------~--~~~t----~~~~~~~~~aa~a~l~~~~~~~~~~- 288 (375)
T PRK04260 233 AKGLA-----NGVPVGAMLAKSSLGGAFGYG------------S--HGST----FGGNKLSMAAASATLDIMLTAGFLE- 288 (375)
T ss_pred ccccc-----CCcceEEEEEcHHHHhhcCCC------------C--CCCC----CCcCHHHHHHHHHHHHHHHhhHHHH-
Confidence 68773 234578888888766544210 0 0011 2234555666777777765555443
Q ss_pred HHHHHHHHHHHHHHHhcc---CC-e-eeccCCCceeeEEEEeccCccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEE
Q 001586 872 SKIAILNANYMAKRLEKH---YP-I-LFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLM 946 (1049)
Q Consensus 872 ~~~~~~~a~yL~~~L~~~---~~-v-~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~p~~~~lr 946 (1049)
+..++.++++++|.+. .. + ...+ .+.+ +.+++. .+...+.++|.++|+.+.... .+.+|
T Consensus 289 --~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~g~~---~~~~~~-------~~~~~~~~~l~~~Gi~v~~~~---~~~lR 352 (375)
T PRK04260 289 --QALENGNYLQEQLQKALQDKETVTTVRG-LGYM---IGIETT-------ADLSQLVEAARDKGLIVLTAG---TNVIR 352 (375)
T ss_pred --HHHHHHHHHHHHHHHHHhhCCCeeEEec-cceE---EEEEec-------CcHHHHHHHHHhCCCEEecCC---CCEEE
Confidence 3344555666666543 22 1 1111 1211 334432 246789999999999874322 37899
Q ss_pred EEccCCCCHHHHHHHHHHHHHH
Q 001586 947 IEPTESESKEELDRYCDALISI 968 (1049)
Q Consensus 947 i~~t~~~t~eeid~fv~aL~~i 968 (1049)
++|+...+++|++++++.|+++
T Consensus 353 ~~~~~~~t~~~i~~~l~~l~~~ 374 (375)
T PRK04260 353 LLPPLTLTKEEIEQGIAILSEV 374 (375)
T ss_pred EcCCCccCHHHHHHHHHHHHHh
Confidence 9999999999999999999765
No 458
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.48 E-value=7.8e-12 Score=146.76 Aligned_cols=319 Identities=18% Similarity=0.238 Sum_probs=193.4
Q ss_pred HHHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCEEEEEcCCC--
Q 001586 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA-- 711 (1049)
Q Consensus 634 i~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~Vv~V~~d~-- 711 (1049)
+.++++.+++++|.+.+ +..++|+.|+..+++++- .++|+| ++.....++.....+.|.+++.+++++
T Consensus 55 ~~~Leeaia~~~g~~~v-v~t~~Gt~Al~la~~al~--------~pGD~V-~~~~~f~~~~~~i~~~Ga~pv~v~i~~~~ 124 (431)
T cd00617 55 FYDLEDAVQDLFGFKHI-IPTHQGRGAENILFSILL--------KPGRTV-PSNMHFDTTRGHIEANGAVPVDLVIDEAH 124 (431)
T ss_pred HHHHHHHHHHHHCCCeE-EEcCCHHHHHHHHHHHhC--------CCCCEE-ccCCcccchHHHHHhCCCEeEEEeccccc
Confidence 34788889999999864 566778877755544331 256766 455433344455778999999999863
Q ss_pred --------CCCCCHHHHHHHHHhc-CCCeEEEEEEcCCc-c-cccc--ccHHHHHHHHHHcCCEEEEeccccc--ccc--
Q 001586 712 --------KGNINIEELRKAAEAN-RDNLSTLMVTYPST-H-GVYE--EGIDEICKIIHDNGGQVYMDGANMN--AQV-- 774 (1049)
Q Consensus 712 --------~g~iD~~~L~~~i~~~-~~~taaV~it~Pn~-~-G~i~--~di~eI~~lah~~G~ll~vD~A~~~--a~~-- 774 (1049)
.|.+|+++|+++|++. .+++++|++++|+. + |..- +++++|+++|+++|++|+.|+|+.. +..
T Consensus 125 ~~~~~~pf~gniD~e~Le~~I~~~~~~~~~~I~v~~p~N~~gG~~~s~~~l~~i~eia~~~gi~li~DaAr~~~na~~i~ 204 (431)
T cd00617 125 DAQELIPFKGNIDVAKLEKLIDEVGAENIPYIVLTITNNTAGGQPVSMANLREVRELAHKYGIPVVLDAARFAENAYFIK 204 (431)
T ss_pred ccccccCCCCCcCHHHHHHHhCcccCCCccEEEEECCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhHhhhhhhh
Confidence 3669999999999743 23588999999954 4 7553 2578999999999999999999642 221
Q ss_pred ----CcC--CCCc------cCCcEEEeCCCcccccCCCCCCCceeEEEEcc-cccccCCCCccccCCCCCCCCCCCCCCC
Q 001586 775 ----GLT--SPGY------IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKK-HLAPFLPSHPVVSTGGIPAPEKSQPLGT 841 (1049)
Q Consensus 775 ----gl~--~Pg~------~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~-~l~~~lpg~~vg~t~~~~~~~~~~~t~~ 841 (1049)
+.. ++++ ...|.+++++||.++. |-+|+++.++ ++...+....+.. . +. ...++
T Consensus 205 ~r~~g~~~~si~ei~~e~~s~sd~~~mS~~K~~~~------~~GG~i~~~d~~l~~~~~~~~~~~-~-----~~-~~~gG 271 (431)
T cd00617 205 EREEGYRDKSIAEIAREMFSYADGCTMSAKKDGLV------NIGGFLALRDDELYEEARQRVVLY-E-----GF-VTYGG 271 (431)
T ss_pred cccccccCCCHHHHHHHhhccCCEEEEEeecCCCC------ccceEEEeCcHHHHHHHHHhcccc-C-----Cc-ccccc
Confidence 221 2222 1579999999997753 4457899886 4665532111000 0 00 00011
Q ss_pred CCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeEEEEeccCccc---cCC
Q 001586 842 IAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKN---TAG 917 (1049)
Q Consensus 842 i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~-~~v~~~g~~g~~~~e~iv~~~~~~~---~~g 917 (1049)
.+ +. ...+....|... .+ . +..+..+.+++||.++|++. +.+.. +.| .|-+.+|.+.|.. ..+
T Consensus 272 ~~----~r--~~~A~A~gL~e~-~~-~-~~l~~~~~~r~~l~~~L~~~G~~v~~--P~G--gh~v~~d~~~~~~~~~~~~ 338 (431)
T cd00617 272 MA----GR--DMEALAQGLREA-VE-E-DYLRHRVEQVRYLGDRLDEAGVPIVE--PAG--GHAVFIDAREFLPHIPQEQ 338 (431)
T ss_pred cc----HH--HHHHHHHHHHhc-cc-H-HHHHHHHHHHHHHHHHHHHCCCCccC--CCc--ceEEEEEhHHhcCCCCccc
Confidence 11 11 111111122111 11 1 23344455779999999985 55542 223 3446778764321 012
Q ss_pred CCHHHHHHHHH-HCCcccC---CCCC---C--------CCCEEEEEccC-CCCHHHHHHHHHHHHHHHHHHHHhhcCCCC
Q 001586 918 IEPEDVAKRLM-DYGFHGP---TMSW---P--------VPGTLMIEPTE-SESKEELDRYCDALISIREEIAQIENGKAD 981 (1049)
Q Consensus 918 ~~~~~v~k~L~-~~Gi~~~---~~~~---p--------~~~~lri~~t~-~~t~eeid~fv~aL~~i~~~i~~i~~g~~~ 981 (1049)
.+...++.+|. +.|+.+. .+.+ | ....+|+.+.- .-|.+++|..+++|+.+.+.-..|..=++.
T Consensus 339 ~~~~~la~~L~~e~gV~~~~~g~~~~~~~~~~~~~~~~~~~~~rl~~prr~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (431)
T cd00617 339 FPAQALAAELYLEAGVRAVELGIFSAGRDPNTGENKYPELELVRLAIPRRVYTQDHMDYVAAAVIALYERREDIRGLRIV 418 (431)
T ss_pred CcHHHHHHHHHHHcCeeEEeecceecccCCCCCcccCCccceeEEeccccccCHHHHHHHHHHHHHHHhhHhhCCCeEEE
Confidence 35778886665 5688742 2221 1 23678988875 568899999999999999887766422233
Q ss_pred CCCcccc
Q 001586 982 IHNNVLK 988 (1049)
Q Consensus 982 ~~~~~l~ 988 (1049)
.+|.+|+
T Consensus 419 ~~~~~lr 425 (431)
T cd00617 419 YEPKLLR 425 (431)
T ss_pred ecCccce
Confidence 4444444
No 459
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.48 E-value=8.7e-12 Score=146.00 Aligned_cols=292 Identities=12% Similarity=0.093 Sum_probs=175.1
Q ss_pred hcHHHHHHHHHHHHHHhhCCC----cc-ccccCchHH-HHHHHHHHHHHHHHhcCCCCCC--EEEEcCCCCCccHHHHHh
Q 001586 628 QGYQEMFNNLGEWLCTITGFD----SF-SLQPNAGAA-GEYAGLMVIRAYHKARGDHHRN--VCIIPVSAHGTNPATAAM 699 (1049)
Q Consensus 628 ~G~~~~i~el~~~la~l~G~~----~~-~l~~~sGa~-ge~a~l~air~y~~~~G~~~r~--~VLip~saHg~~pa~a~~ 699 (1049)
+|..++...+.+++.+.+|.+ .. .+..++|++ |.+ ++++.+. . +++ .|++|...+..+...+.+
T Consensus 64 ~G~~~lr~aia~~~~~~~~~~~~~~~~~~i~it~Ga~~al~---~~~~~l~-~----~gd~~~vlv~~P~y~~~~~~~~~ 135 (393)
T TIGR03538 64 KGLPELRQAIARWLERRFDLPTGVDPERHVLPVNGTREALF---AFAQAVI-N----PGQAPLVVMPNPFYQIYEGAALL 135 (393)
T ss_pred CCCHHHHHHHHHHHHHhhCCcccCCCCceEEECCCcHHHHH---HHHHHHc-C----CCCcceEEecCCCCcchHHHHHh
Confidence 566666666777776665643 32 455555544 433 3333332 1 334 488888766556666888
Q ss_pred cCCEEEEEcCCCC--CCCCHHHHHHHHHhcCCCeEEEEEEcCC-cccccc--ccHHHHHHHHHHcCCEEEEeccccccc-
Q 001586 700 CGMKIVSVGTDAK--GNINIEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQ- 773 (1049)
Q Consensus 700 ~G~~Vv~V~~d~~--g~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~--~di~eI~~lah~~G~ll~vD~A~~~a~- 773 (1049)
.|.+++.++++++ ..+|+++|++++. +++++|++++|+ .+|.+- +.+++|+++|+++|+++++|.++..-.
T Consensus 136 ~g~~~~~v~~~~~~~~~~d~~~l~~~~~---~~~k~i~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~ 212 (393)
T TIGR03538 136 AGAEPYFLNCTAENGFLPDFDAVPESVW---RRCQLLFVCSPGNPTGAVLSLDTLKKLIELADQYGFIIASDECYSELYF 212 (393)
T ss_pred cCCeEEEeeccccCCCCCCHHHHHHHHh---hcceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEECcchhhccc
Confidence 9999999999644 4689999999987 588999999994 689775 248999999999999999999864211
Q ss_pred cC-cCCC------CccCCc-----EEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCC
Q 001586 774 VG-LTSP------GYIGAD-----VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGT 841 (1049)
Q Consensus 774 ~g-l~~P------g~~GaD-----i~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~ 841 (1049)
.+ ...+ ...+.| |++.|+.|.|++ .|.++|++++++++...+-. . ... ..
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~~----~GlRvG~~i~~~~l~~~~~~--~----------~~~--~~ 274 (393)
T TIGR03538 213 DEGNPPAGLLQAAAQLGRDDFRRCLVFHSLSKRSNL----PGLRSGFVAGDAEILKAFLR--Y----------RTY--HG 274 (393)
T ss_pred CCCCCCcCHHHhcccccccccccEEEEecchhhcCC----cccceEEEecCHHHHHHHHH--H----------HHh--hc
Confidence 10 0011 012211 667778887754 47889999988766544310 0 000 01
Q ss_pred CCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeEEEEeccCccccCCCCHH
Q 001586 842 IAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPE 921 (1049)
Q Consensus 842 i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~ 921 (1049)
.+.+...+.. +.+.+ ...+-+++..+...++.+.+.+.|++.+.+.. +.+.. -+.++++ .+..
T Consensus 275 ~~~~~~~q~~----~~~~l--~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~--p~gg~--f~~~~~~-------~~~~ 337 (393)
T TIGR03538 275 CAMPIPTQLA----SIAAW--NDEQHVRENRALYREKFAAVLEILGQVLDLEL--PDAGF--YLWPKVP-------GDDE 337 (393)
T ss_pred cCcCHHHHHH----HHHHh--cChHHHHHHHHHHHHHHHHHHHHHHhhCcccC--CCeeE--EEEEECC-------CCHH
Confidence 1111111111 11111 11233445555556677778888876543321 22222 2445653 2456
Q ss_pred HHHHHHH-HCCcccC-CCCC--------CCCCEEEEEccCCCCHHHHHHHHHHHHH
Q 001586 922 DVAKRLM-DYGFHGP-TMSW--------PVPGTLMIEPTESESKEELDRYCDALIS 967 (1049)
Q Consensus 922 ~v~k~L~-~~Gi~~~-~~~~--------p~~~~lri~~t~~~t~eeid~fv~aL~~ 967 (1049)
+++++|. ++|+.+. +..| +..+++||++.. +.++++..++.|++
T Consensus 338 ~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~~~Ris~~~--~~~~l~~~l~~l~~ 391 (393)
T TIGR03538 338 AFARALYEEENVTVLPGRFLAREAEGVNPGEGRVRIALVA--PLEECVEAAERIRS 391 (393)
T ss_pred HHHHHHHHHCCEEEeCCccccccccCCCCCCCEEEEEecC--CHHHHHHHHHHHHH
Confidence 7888875 6899863 2222 124789999874 57888888877765
No 460
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=99.48 E-value=6.1e-12 Score=141.70 Aligned_cols=354 Identities=15% Similarity=0.203 Sum_probs=223.9
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHhcCCCccc--cccCCCCCCCCCcHHHHHHHHhCCccccccCCChhhHhhhHHHHHHHH
Q 001586 139 MKFSKFDEGLTESQMIEHMQKLASMNKVYK--SFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNF 216 (1049)
Q Consensus 139 ~~lp~~~~~~sE~e~~~~~~~la~~n~~~~--~~lG~g~y~~~~p~~i~~~~~~~~~~~t~ytpyq~e~sqg~le~l~e~ 216 (1049)
..|| ..+++..++++.+++....+-.+. -..|..|+. -|... .+.. +-|.-|+|-.+.+.++.-+.--+.
T Consensus 54 ~~lP--~~gl~~d~v~~~i~~~~~ld~~~~~~~vS~~v~~~--~~~~~--~l~~--~~~~k~N~l~~d~fp~~~~~e~~~ 125 (491)
T KOG1383|consen 54 FTLP--SKGLPKDAVLELINDELMLDGNPRLGLASGVVYWG--EPELD--KLIM--EAYNKFNPLHPDEFPVVRKLEAEC 125 (491)
T ss_pred ecCC--CCCCCHHHHHHHHHHHhccCCCcccCeeeEEEecC--Ccchh--hHHH--HHHhhcCccCccccchhHHHHHHH
Confidence 3577 689999999999988766554322 133455543 22222 2322 124455788888888888888889
Q ss_pred HHHHHHHhCCCCc-ceEeccchHHHHHHHHHHhhhcc-C----CCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCcc-
Q 001586 217 QTMIADLTGLPMS-NASLLDEGTAAAEAMAMCNNIQK-G----KKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK- 289 (1049)
Q Consensus 217 q~~ia~L~G~~~~-n~sl~~~~Ta~~eA~~~a~~~~~-~----~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~~~- 289 (1049)
-.|+|.|++.+.+ ....+.|+|.++.++..+.+..+ . ...+++++.++|.+ |+.+++.++++++.++++
T Consensus 126 Vnm~~~L~~~~~~~~g~~t~G~Ses~l~~~k~~~~~r~~~k~I~~p~iv~~~~v~~a----~eK~a~yf~v~l~~V~~~~ 201 (491)
T KOG1383|consen 126 VNMIANLFNAPSDSCGCGTVGGSESGLAAKKSYRNRRKAQKGIDKPNIVTPQNVHAA----FEKAARYFEVELREVPLDE 201 (491)
T ss_pred HHHHHHHhcCCccccCccccccchHHHHHHHHHHHHHHhccCCCCccccchHHHHHH----HHHHHhhEEEEEEeeeccc
Confidence 9999999999753 44456677744333222222111 1 22345555555544 555577789999998875
Q ss_pred -----hh---hc-cCCCEeEEEEEcCC-CCeeeccHHHHHHHHHh-CCcEEEEEeccccccC---CCCCCcccc-----e
Q 001586 290 -----DI---DY-KSGDVCGVLVQYPG-TEGEVLDYGDFIKNAHA-NGVKVVMATDLLALTI---LKPPGELGA-----D 350 (1049)
Q Consensus 290 -----~l---~~-l~~~t~~V~v~~pn-~~G~i~di~~I~~~ah~-~galliV~a~~~alg~---l~~p~~~Ga-----D 350 (1049)
|+ .+ ++++|++|+...|| ++|.++|+++|.++.-+ ++..++|++-+-++-. ..++.+||. -
T Consensus 202 ~~~~~D~~k~~~~i~eNti~lv~~~~~~p~G~~e~ve~l~~l~~e~w~ipiHvDa~~GgFi~p~~~~~~~~fdFr~p~V~ 281 (491)
T KOG1383|consen 202 GDYRVDPGKVVRMIDENTIMLVGSLPNFPTGEIEDVEKLADLLLEIWDIPIHVDACLGGFINPAGYLNEEEFDFRVPGVT 281 (491)
T ss_pred cceEecHHHHHHHhccceEEEEEEcCCCCccchhhHHHHHHHHHHHhCCceeecccCccccccccccCccccccCCCCce
Confidence 22 23 78999999999996 79999999999999999 9999999653322211 122334543 2
Q ss_pred EEEecCccccccCCCCCCceE-EEEEchhHHhcCCCceeeeeecCCCC--cceeeecccccccccccccCCCccchhHHH
Q 001586 351 IVVGSAQRFGVPMGYGGPHAA-FLATSQEYKRMMPGRIVGVSIDSSGK--PALRVAMQTREQHIRRDKATSNICTAQALL 427 (1049)
Q Consensus 351 ivvgs~k~lg~P~~~GGP~~G-~l~~~~~l~~~lpgrivG~s~d~~g~--~~~~l~lqtreq~irrekaTsni~t~~~l~ 427 (1049)
-.-.+++++|.-+ +|.+ +++..+++ +|-.++- ..|-.|. ..+.++. -++.+++ .
T Consensus 282 Sisa~~HKYGl~~----~G~~~vl~r~k~~---~~~q~~~-~~~w~Gg~y~s~Tlng---------SR~g~~v------a 338 (491)
T KOG1383|consen 282 SISADGHKYGLAP----AGSSWVLYRNKEL---LPHQLFF-HTDWLGGIYASPTLNG---------SRPGSQV------A 338 (491)
T ss_pred eEeeccceeeeee----cCcEEEEEccccc---ccceEEE-eccccCccccCccccc---------CCcccHH------H
Confidence 2233456675421 2343 33333333 2322222 1222222 1223322 1222222 1
Q ss_pred HHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEcCCCCcceEEEecCC--HHHHHHHHHHcCCeeeee-cC
Q 001586 428 ANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD--AHAIASAAYKIEMNLRVV-DS 504 (1049)
Q Consensus 428 a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~g~~~v~~~~~~~~v~i~~~~--~~~v~~~L~~~gI~~~~~-~~ 504 (1049)
+.-|+ +..+|.+|+++..++|.+.+.+|+++|++++++.++++|...-+.+.... -.++.+.|.++||++..+ .+
T Consensus 339 ~~wa~--~~~lG~eGY~~~~~~ive~~~~l~egie~i~~i~i~gkp~vs~~~~~s~~~~i~elsd~l~~~GW~lnalq~P 416 (491)
T KOG1383|consen 339 AQWAA--LMSLGEEGYRENTQNIVETARKLREGIENIKGIKIVGKPLVSFILFGSNDVNIFELSDLLRKKGWILNALQFP 416 (491)
T ss_pred HHHHH--HHHhhHHHHHHHHHHHHHHHHHHHHhhhccccceecCCCcEEEEEccCCccchhhhhHHHHhcCcCccccCCC
Confidence 22222 47899999999999999999999999999966999877543222222222 579999999999999876 36
Q ss_pred CeEEEEeccCCCHHHH-HHHHHHHhC
Q 001586 505 NTVTASFDETTTLEDV-DKLFIVFAG 529 (1049)
Q Consensus 505 ~~vris~~~~~t~edi-d~lv~aL~~ 529 (1049)
..+.+|++-.++.+++ |+|+..+..
T Consensus 417 ~a~Hi~vt~~~~~~~~A~~~v~Di~~ 442 (491)
T KOG1383|consen 417 AAIHICVTRVHAREDVADRFVADIRK 442 (491)
T ss_pred CceEEEEEeeeccHHHHHHHHHHHHH
Confidence 7899999999999985 777777753
No 461
>PRK08175 aminotransferase; Validated
Probab=99.48 E-value=1.2e-11 Score=144.96 Aligned_cols=303 Identities=13% Similarity=0.123 Sum_probs=177.2
Q ss_pred hcHHHHHHHHHHHHHHhhCCC--cc-ccccCchHH-HHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCE
Q 001586 628 QGYQEMFNNLGEWLCTITGFD--SF-SLQPNAGAA-GEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMK 703 (1049)
Q Consensus 628 ~G~~~~i~el~~~la~l~G~~--~~-~l~~~sGa~-ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~ 703 (1049)
+|..++.+.+.+++.+..|.. .. ++..++|++ |.. ++++.+. .++++|+++...+..+...++..|++
T Consensus 67 ~G~~~lr~aia~~~~~~~g~~~~~~~~i~~t~G~~~~l~---~~~~~~~-----~~gd~Vlv~~P~y~~~~~~~~~~g~~ 138 (395)
T PRK08175 67 RGIPRLRRAISRWYQDRYDVDIDPESEAIVTIGSKEGLA---HLMLATL-----DHGDTVLVPNPSYPIHIYGAVIAGAQ 138 (395)
T ss_pred CCCHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHHHH---HHHHHhC-----CCCCEEEEcCCCCcchHHHHHHcCCe
Confidence 566666666677776665653 22 355555553 432 2223221 25688999988777766777889999
Q ss_pred EEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-Ccccccc--ccHHHHHHHHHHcCCEEEEeccccccc-cCcCCC
Q 001586 704 IVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQ-VGLTSP 779 (1049)
Q Consensus 704 Vv~V~~d~~g~iD~~~L~~~i~~~~~~taaV~it~P-n~~G~i~--~di~eI~~lah~~G~ll~vD~A~~~a~-~gl~~P 779 (1049)
++.++.++++ .++++|+++++++.+++++|++++| |.+|.+- +.+++|+++|+++|+++++|.++..-. .+-..+
T Consensus 139 ~~~v~~~~~~-~~~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~ 217 (395)
T PRK08175 139 VRSVPLVEGV-DFFNELERAIRESYPKPKMMILGFPSNPTAQCVELEFFEKVVALAKRYDVLVVHDLAYADIVYDGWKAP 217 (395)
T ss_pred EEEEecccCC-CcHHHHHHHHhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchHhhccCCCCCc
Confidence 9999987653 3689999988755468899999988 4689775 135899999999999999999863211 111011
Q ss_pred ------CccCCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHH
Q 001586 780 ------GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALIL 853 (1049)
Q Consensus 780 ------g~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~ 853 (1049)
+..+..+++.++.|.|+.| |-++|+++.++++.+.+-.. ......+.++ ...
T Consensus 218 ~~~~~~~~~~~~i~~~S~SK~~g~p----GlRiG~~~~~~~l~~~~~~~------------~~~~~~~~~~------~~q 275 (395)
T PRK08175 218 SIMQVPGAKDVAVEFFTLSKSYNMA----GWRIGFMVGNPELVSALARI------------KSYHDYGTFT------PLQ 275 (395)
T ss_pred chhcCCCcccCEEEEeeccccccCc----chhheeeeCCHHHHHHHHHH------------HhhcccCCCc------HHH
Confidence 1112235567888887533 56689999887666543210 0000011111 111
Q ss_pred HHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHH-HCCc
Q 001586 854 PISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-DYGF 932 (1049)
Q Consensus 854 ~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~-~~Gi 932 (1049)
.++.+.+. ...+-+++..+...++.+++.+.|++. .+.+..+.+.. -+.++++... ...+..+++.+|. ++|+
T Consensus 276 ~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~p~~g~--~i~i~l~~~~--~~~~~~~~~~~l~~~~gv 349 (395)
T PRK08175 276 VAAIAALE-GDQQCVRDIAEQYKRRRDVLVKGLHEA-GWMVEMPKASM--YVWAKIPEPY--AAMGSLEFAKKLLNEAKV 349 (395)
T ss_pred HHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHHHHc-CCcccCCCEEE--EEEEECCccc--CCCCHHHHHHHHHHhCCE
Confidence 11122222 122234444555566778888988875 22221222212 2456654210 0124678887765 6899
Q ss_pred ccCCC-CCC--CCCEEEEEccCCCCHHHHHHHHHHHHHHH
Q 001586 933 HGPTM-SWP--VPGTLMIEPTESESKEELDRYCDALISIR 969 (1049)
Q Consensus 933 ~~~~~-~~p--~~~~lri~~t~~~t~eeid~fv~aL~~i~ 969 (1049)
.+... .|+ -.+++|+++. .+.+++...++.|.+++
T Consensus 350 ~v~p~~~f~~~~~~~lRis~~--~~~~~~~~al~~l~~~l 387 (395)
T PRK08175 350 CVSPGIGFGDYGDTHVRFALI--ENRDRIRQAIRGIKAMF 387 (395)
T ss_pred EEeCchhhCcCCCCeEEEEeC--CCHHHHHHHHHHHHHHH
Confidence 86432 232 2468999985 35666666666665554
No 462
>PRK06836 aspartate aminotransferase; Provisional
Probab=99.47 E-value=1.4e-11 Score=144.38 Aligned_cols=297 Identities=15% Similarity=0.194 Sum_probs=176.3
Q ss_pred hcHHHHHHHHHHHHHHhhCC--Ccccc-ccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCEE
Q 001586 628 QGYQEMFNNLGEWLCTITGF--DSFSL-QPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKI 704 (1049)
Q Consensus 628 ~G~~~~i~el~~~la~l~G~--~~~~l-~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~V 704 (1049)
.|..++...+.+++....+. +...+ ..++++++....+ +.+. .++++|+++...+..+...++..|+++
T Consensus 73 ~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~G~~~al~~~~---~~l~-----~~gd~Vli~~p~~~~~~~~~~~~g~~v 144 (394)
T PRK06836 73 AGYPEVREAIAESLNRRFGTPLTADHIVMTCGAAGALNVAL---KAIL-----NPGDEVIVFAPYFVEYRFYVDNHGGKL 144 (394)
T ss_pred CCCHHHHHHHHHHHHHHhCCCCCcCcEEEeCChHHHHHHHH---HHhc-----CCCCEEEEcCCCCccHHHHHHHcCCEE
Confidence 35444444555555544433 33333 3444444443333 3221 256889999887766666778899999
Q ss_pred EEEcCCCC-CCCCHHHHHHHHHhcCCCeEEEEEEcCC-cccccc--ccHHHHHHHHHH------cCCEEEEeccccccc-
Q 001586 705 VSVGTDAK-GNINIEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHD------NGGQVYMDGANMNAQ- 773 (1049)
Q Consensus 705 v~V~~d~~-g~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~--~di~eI~~lah~------~G~ll~vD~A~~~a~- 773 (1049)
+.++++++ +.+|+++|+++++ +++++|++++|+ .+|.+. .++++|+++|++ ||+++++|.++..-.
T Consensus 145 ~~v~~~~~~~~~d~~~l~~~~~---~~~~~v~~~~p~NPtG~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~ 221 (394)
T PRK06836 145 VVVPTDTDTFQPDLDALEAAIT---PKTKAVIINSPNNPTGVVYSEETLKALAALLEEKSKEYGRPIYLISDEPYREIVY 221 (394)
T ss_pred EEEecCCccCcCCHHHHHhhcC---cCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHhhhccCCCeEEEEecccccccc
Confidence 99999776 6899999999997 789999999995 599874 258888889998 899999999864211
Q ss_pred cCcCCC---CccCCcEEEeCCCcccccCCCCCCCceeEEEEccccccc---CCCCccccCCCCCCCCCCCCCCCCCccch
Q 001586 774 VGLTSP---GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPF---LPSHPVVSTGGIPAPEKSQPLGTIAAAPW 847 (1049)
Q Consensus 774 ~gl~~P---g~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~---lpg~~vg~t~~~~~~~~~~~t~~i~sa~~ 847 (1049)
.+-..| ..+.-.+++.|+.|.|+.| |-++|++++++.+... +...... ....+..+.+..
T Consensus 222 ~~~~~~~~~~~~~~~i~~~S~SK~~~~p----GlRiG~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~ 287 (394)
T PRK06836 222 DGAEVPYIFKYYDNSIVVYSFSKSLSLP----GERIGYIAVNPEMEDADDLVAALVFA----------NRILGFVNAPAL 287 (394)
T ss_pred CCCCCCChHHccCcEEEEecchhhccCc----ceeeEEEecCHHHhhhHHHHHHHHHH----------hhccccccCCHH
Confidence 110111 1223357778889988543 5678999987654221 1000000 000011111111
Q ss_pred hhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHH
Q 001586 848 GSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKR 926 (1049)
Q Consensus 848 g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~-~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~ 926 (1049)
.+. +. ...+. ++.. .+...++.+.+.+.|+++ +.+. .+.+.++ +.+.++ ..+..++++.
T Consensus 288 ~q~----~~---~~~l~-~~~~--~~~~~~~r~~l~~~L~~~g~~~~--~~~gg~~--~~~~~~------~~~~~~~~~~ 347 (394)
T PRK06836 288 MQR----VV---AKCLD-ATVD--VSIYKRNRDLLYDGLTELGFECV--KPQGAFY--LFPKSP------EEDDVAFCEK 347 (394)
T ss_pred HHH----HH---HHHhC-ChHH--HHHHHHHHHHHHHHHHhCCCEee--cCCceEE--EEEeCC------CCCHHHHHHH
Confidence 111 11 11221 2211 223345566777888765 3322 2222221 233443 1356788888
Q ss_pred HHHCCcccCC-CCCCCCCEEEEEccCCCCHHHHHHHHHHHHHHHHH
Q 001586 927 LMDYGFHGPT-MSWPVPGTLMIEPTESESKEELDRYCDALISIREE 971 (1049)
Q Consensus 927 L~~~Gi~~~~-~~~p~~~~lri~~t~~~t~eeid~fv~aL~~i~~~ 971 (1049)
|.++|+.+.. -.|..++++||++. .++++++..++.|+++++.
T Consensus 348 l~~~gv~v~~g~~f~~~~~iRi~~~--~~~~~~~~~i~~l~~~l~~ 391 (394)
T PRK06836 348 AKKHNLLLVPGSGFGCPGYFRLSYC--VDTETIERSLPAFEKLAKE 391 (394)
T ss_pred HHhCCEEEECchhcCCCCeEEEEec--CCHHHHHHHHHHHHHHHHH
Confidence 9999997643 23444689999997 4688899988888887754
No 463
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=99.46 E-value=1.9e-12 Score=142.63 Aligned_cols=323 Identities=19% Similarity=0.240 Sum_probs=199.6
Q ss_pred cccccccccCccccccccc-cCcccccCCCCCchhhhhcHHHHHHHHHHHHHHhhCCCc-cccccCchHHHHHHHHHHHH
Q 001586 592 IPLGSCTMKLNATTEMMPV-TWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDS-FSLQPNAGAAGEYAGLMVIR 669 (1049)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~-~~~~f~~~~P~~p~e~~~G~~~~i~el~~~la~l~G~~~-~~l~~~sGa~ge~a~l~air 669 (1049)
..+|+|.+++++.++.+.. -|-.|..|+ . +.+.++.+.|.+++--+. +.++.|||++|++.+++++|
T Consensus 62 vslGHchP~v~~a~~kQl~~l~H~t~~~~--~---------~pi~~~Ae~L~s~~P~~l~~vfF~nsGsEANelal~mar 130 (442)
T KOG1404|consen 62 VSLGHCHPDVVAAAVKQLKKLYHTTSGYL--N---------PPIHDLAEALVSKLPGDLKVVFFVNSGSEANELALKMAR 130 (442)
T ss_pred EEcCCCChHHHHHHHHhhhhhEEeecccc--C---------CcHHHHHHHHHHhCCCCceEEEEecCCchHHHHHHHHHH
Confidence 3789999999888887741 111111121 1 125577788887765443 46889999999999999999
Q ss_pred HHHHhcCCCCCCEEE-EcCCCCCccHHHHHhcCCEEEEEcC-------------CC-C----CC-------CCHHHHHHH
Q 001586 670 AYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGMKIVSVGT-------------DA-K----GN-------INIEELRKA 723 (1049)
Q Consensus 670 ~y~~~~G~~~r~~VL-ip~saHg~~pa~a~~~G~~Vv~V~~-------------d~-~----g~-------iD~~~L~~~ 723 (1049)
.|.. .-+|| ...+.||.-+.++...|+....-++ |. . |. --.++|+..
T Consensus 131 ~Yt~------~~diIa~r~~YHG~t~~t~glt~~~~~k~~~~~~~~~~~~~~~Pdp~r~~~~~~~~~e~~d~~a~~l~d~ 204 (442)
T KOG1404|consen 131 LYTG------NLDIIARRNSYHGNTLYTLGLTGLSPWKQNFPGVASGVHHTMNPDPYRGIFGGSNEEEASDRYAKELEDL 204 (442)
T ss_pred HhcC------CceEEEeeccccCCchhhcccccCCcccccCCCCCCcccccCCCCcccccCCCCchhhhHHHHHHHHHHH
Confidence 8832 33455 7888999887775544433222111 10 0 11 113455555
Q ss_pred HHhcCC-CeEEEEEEcC-Cccccccc---cHHHHHHHHHHcCCEEEEeccccccccCcCCCCcc-C-------CcEEEeC
Q 001586 724 AEANRD-NLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI-G-------ADVCHLN 790 (1049)
Q Consensus 724 i~~~~~-~taaV~it~P-n~~G~i~~---di~eI~~lah~~G~ll~vD~A~~~a~~gl~~Pg~~-G-------aDi~~~s 790 (1049)
+....+ .+++++++.. ..-|++++ .+++..++|+++|+++|.|++ |.|+.+.|.+ | +||+++
T Consensus 205 i~~~~~~~vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~Ggl~IaDEV----qtGfGRtG~~wgfe~h~v~PDIvTm- 279 (442)
T KOG1404|consen 205 ILYDGPETVAAFIAETIQGVGGIVELPPGYLKAAYKVVRKRGGLFIADEV----QTGFGRTGHMWGFESHGVVPDIVTM- 279 (442)
T ss_pred HHhcCCCceeEEEeehhccCCccccCCchHHHHHHHHHHHcCCEEEehhh----hhccccccccccccccCCCccHHHH-
Confidence 543333 4556655554 35688873 489999999999999999986 6788887742 3 577665
Q ss_pred CCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHH
Q 001586 791 LHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTE 870 (1049)
Q Consensus 791 ~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~ 870 (1049)
.|.+ |.| -.+|.+.+.++++.-+..+.. ..++ +.|++..++++.+.+..+-++.+.+
T Consensus 280 -AKgi----GnG-~Pl~AVvtt~EIa~v~~~~~~--------------~fnT---yggnP~a~avg~aVL~Vikee~LqE 336 (442)
T KOG1404|consen 280 -AKGI----GNG-FPLGAVVTTPEIADVLNQKSS--------------HFNT---YGGNPVACAVGLAVLKVIKEENLQE 336 (442)
T ss_pred -Hhhc----cCC-CcceeeecCHHHHHHHHhccc--------------cccc---cCCCchhHHHHHHHHHHHHHHhHHH
Confidence 4766 344 445666667666554321110 0111 2345666777888899888877665
Q ss_pred HHHHHHHHHHHHHHHHhcc---CCeee--ccCCCce-eeEEEEec-cCccccCCCCHHHHHHHHHHCCcccCCCCCCCCC
Q 001586 871 ASKIAILNANYMAKRLEKH---YPILF--RGVNGTV-AHEFIVDL-RGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPG 943 (1049)
Q Consensus 871 ~~~~~~~~a~yL~~~L~~~---~~v~~--~g~~g~~-~~e~iv~~-~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~p~~~ 943 (1049)
.+ .+...||.++|.+. ++++- .|. |.. -.|++=|- +.+. ........+.+.+.+.|+.++.-... ++
T Consensus 337 ~a---a~vG~yl~~~l~~l~d~h~iIGdVRG~-GLm~GvE~V~dk~~~~p-p~~~~~~~i~~~cke~Gvlvg~g~i~-G~ 410 (442)
T KOG1404|consen 337 NA---AEVGSYLLEKLAALKDKHPIIGDVRGR-GLMLGVELVSDKSEPKP-PATAEGAVIGEQCKELGVLVGKGGIH-GN 410 (442)
T ss_pred HH---HHHHHHHHHHHHHHhhcCCceeecccc-eeEEEEEEecccCCCCC-cchHHHHHHHHHHHHhCeeeeccccc-ce
Confidence 44 46788999999875 44431 121 221 22443332 1111 11123456788899999998532211 57
Q ss_pred EEEEEccCCCCHHHHHHHHHHH
Q 001586 944 TLMIEPTESESKEELDRYCDAL 965 (1049)
Q Consensus 944 ~lri~~t~~~t~eeid~fv~aL 965 (1049)
++||.|....|++|+|..++..
T Consensus 411 vfriaPPlciT~edi~f~~~~~ 432 (442)
T KOG1404|consen 411 VFRIAPPLCITKEDIDFAVEYF 432 (442)
T ss_pred EEEecCCeeccHHHHHHHHHHH
Confidence 8999999999999997666655
No 464
>PRK09265 aminotransferase AlaT; Validated
Probab=99.46 E-value=2.1e-11 Score=143.33 Aligned_cols=297 Identities=12% Similarity=0.067 Sum_probs=168.5
Q ss_pred HHHHHHHHhh------CCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCEEEEEcC
Q 001586 636 NLGEWLCTIT------GFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGT 709 (1049)
Q Consensus 636 el~~~la~l~------G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~Vv~V~~ 709 (1049)
++++.+++.+ +.+...+..++|++. +..++++.+. .++++|+++...|......+...|.+++.+++
T Consensus 76 ~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~--~l~~~~~~~~-----~~gd~Vlv~~p~y~~~~~~~~~~g~~~v~~~~ 148 (404)
T PRK09265 76 SARKAIMQYYQQKGIPDVDVDDIYIGNGVSE--LIVMAMQALL-----NNGDEVLVPAPDYPLWTAAVSLSGGKPVHYLC 148 (404)
T ss_pred HHHHHHHHHHhccCCCCCCcccEEEeCChHH--HHHHHHHHhC-----CCCCEEEEeCCCCcChHHHHHHcCCEEEEEec
Confidence 3444455444 455545555555542 2233344331 25688999998887777778889999999887
Q ss_pred CCC--CCCCHHHHHHHHHhcCCCeEEEEEEcCC-cccccc--ccHHHHHHHHHHcCCEEEEeccccccc-cC--cCCCCc
Q 001586 710 DAK--GNINIEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQ-VG--LTSPGY 781 (1049)
Q Consensus 710 d~~--g~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~--~di~eI~~lah~~G~ll~vD~A~~~a~-~g--l~~Pg~ 781 (1049)
+.+ +.+|+++|+++++ +++++|++++|+ .+|.+. +++++|+++|+++|+++++|.++..-. .+ ..+...
T Consensus 149 ~~~~~~~~d~~~l~~~~~---~~~~~v~l~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~ 225 (404)
T PRK09265 149 DEEAGWFPDLDDIRSKIT---PRTKAIVIINPNNPTGAVYSKELLEEIVEIARQHNLIIFADEIYDKILYDGAVHISIAS 225 (404)
T ss_pred ccccCCCCCHHHHHHhcc---ccceEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhhhccCCCCCcCCHHH
Confidence 643 5799999999986 688999999995 699875 139999999999999999998753211 11 001011
Q ss_pred c--CCcE-EEeCCCcccccCCCCCCCceeEEEEc--ccc----cccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHH
Q 001586 782 I--GADV-CHLNLHKTFCIPHGGGGPGMGPIGVK--KHL----APFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALI 852 (1049)
Q Consensus 782 ~--GaDi-~~~s~hK~f~~P~g~GGPg~G~i~~~--~~l----~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~ 852 (1049)
+ ...+ ++.++.|+|++| |-++|++++. +.+ ...+. .. .....+++ ..++..
T Consensus 226 ~~~~~~vi~~~S~SK~~~~p----GlRiG~~v~~~~~~~~~~~~~~~~--~~-----------~~~~~~~~--~~~q~~- 285 (404)
T PRK09265 226 LAPDLLCVTFNGLSKAYRVA----GFRVGWMVLSGPKKHAKGYIEGLD--ML-----------ASMRLCAN--VPAQHA- 285 (404)
T ss_pred cCCCceEEEEecchhhccCc----ccceEEEEEeCchHHHHHHHHHHH--HH-----------hccccCCC--cHHHHH-
Confidence 1 1123 456677887543 6778999863 221 11110 00 00001111 111221
Q ss_pred HHHHHHHHHHHchhhHHHH---HHHHHHHHHHHHHHHhccCCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHHH
Q 001586 853 LPISYTYIAMMGSKGLTEA---SKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMD 929 (1049)
Q Consensus 853 ~~~a~a~l~~lG~eGl~~~---~~~~~~~a~yL~~~L~~~~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~ 929 (1049)
+.+++. ..+.+.+. .+...++.+++.+.|+++..+.+..+.+.++ +.++++.-......+.+.+.+.|.+
T Consensus 286 ---~~~~l~--~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~p~~g~~--l~~~~~~~~~~~~~~~~~~~~~l~~ 358 (404)
T PRK09265 286 ---IQTALG--GYQSINELILPGGRLYEQRDRAWELLNAIPGVSCVKPKGALY--AFPKLDPKVYPIHDDEQFVLDLLLQ 358 (404)
T ss_pred ---HHHHhc--CchhHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCcceE--EEEEecccccCCCCHHHHHHHHHHh
Confidence 122221 11112222 1244456777888887641222222222222 3345431000000123456677888
Q ss_pred CCcccC-CCCCC--CCCEEEEEccCCCCHHHHHHHHHHHHHHHHH
Q 001586 930 YGFHGP-TMSWP--VPGTLMIEPTESESKEELDRYCDALISIREE 971 (1049)
Q Consensus 930 ~Gi~~~-~~~~p--~~~~lri~~t~~~t~eeid~fv~aL~~i~~~ 971 (1049)
+|+.+. +..|+ ..+++|+++. .+.+++++.++.|+++++.
T Consensus 359 ~gv~v~pg~~F~~~~~~~~Ri~~~--~~~e~l~~~l~rl~~~l~~ 401 (404)
T PRK09265 359 EKVLLVQGTGFNWPEPDHFRIVTL--PRVDDLEEAIGRIGRFLSG 401 (404)
T ss_pred CCEEEECchhhCCCCCCeEEEEeC--CCHHHHHHHHHHHHHHHHH
Confidence 999863 32342 3579999994 5788999999999887654
No 465
>PRK09105 putative aminotransferase; Provisional
Probab=99.46 E-value=2.7e-11 Score=140.68 Aligned_cols=264 Identities=14% Similarity=0.094 Sum_probs=172.2
Q ss_pred HHHHHHHHHHHhCCCCcceEeccchHHHHHHHHHHhhhccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCcc---
Q 001586 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK--- 289 (1049)
Q Consensus 213 l~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a~~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~~~--- 289 (1049)
..++++.+++.+|.++.++.++.|++.++..++.++. ++||+|++++-.|+.+...++ ..|++++.++.+
T Consensus 80 ~~~Lr~aia~~~~v~~e~I~it~Gs~~ai~~~~~~l~---~~gd~Vli~~P~y~~~~~~~~----~~g~~~~~v~~~~~~ 152 (370)
T PRK09105 80 EDDLRTLFAAQEGLPADHVMAYAGSSEPLNYAVLAFT---SPTAGLVTADPTYEAGWRAAD----AQGAPVAKVPLRADG 152 (370)
T ss_pred HHHHHHHHHHHhCcChhhEEEcCChHHHHHHHHHHHc---CCCCEEEEeCCChHHHHHHHH----HcCCeEEEecCCCCC
Confidence 4457778999999999999999999977665554442 378999999999998876653 468888887653
Q ss_pred -----hhhccCCCEeEEEEEcC-CCCeeeccHHHHHHHHHh--CCcEEEEEeccccccCCCCCC---cccceEEEe-cC-
Q 001586 290 -----DIDYKSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHA--NGVKVVMATDLLALTILKPPG---ELGADIVVG-SA- 356 (1049)
Q Consensus 290 -----~l~~l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~--~galliV~a~~~alg~l~~p~---~~GaDivvg-s~- 356 (1049)
++++..+++++|++.+| |++|.+.+.++|.++++. +|++++++.-...+....+.. +.+-++++. |.
T Consensus 153 ~~d~~~l~~~~~~~~~v~l~nP~NPTG~~~~~~~l~~l~~~~~~~~~lIvDEaY~~f~~~~s~~~~~~~~~~vi~~~SfS 232 (370)
T PRK09105 153 AHDVKAMLAADPNAGLIYICNPNNPTGTVTPRADIEWLLANKPAGSVLLVDEAYIHFSDAPSVVDLVAQRKDLIVLRTFS 232 (370)
T ss_pred CCCHHHHHhcCCCCCEEEEeCCCCCCCcCcCHHHHHHHHHhCCCCcEEEEECchHHhccCcchHHHHhhCCCEEEEeccc
Confidence 22222356888999998 799999988888777654 488888843111221111111 234566554 43
Q ss_pred ccccccCCCCCCc--eEEEEEchhHHhcCCCceeeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHH
Q 001586 357 QRFGVPMGYGGPH--AAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMY 434 (1049)
Q Consensus 357 k~lg~P~~~GGP~--~G~l~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irrekaTsni~t~~~l~a~~aa~y 434 (1049)
|.||. || .|++++.+++.+.+-. - ...+.+ ... ..+++
T Consensus 233 K~~g~------~GlRiG~~v~~~~~i~~l~~----------------------------~-~~~~~~-~~~---~~aa~- 272 (370)
T PRK09105 233 KLYGM------AGMRLGLAAARPDLLAKLAR----------------------------F-GHNPLP-VPA---AAAGL- 272 (370)
T ss_pred HhhcC------CccceeeeecCHHHHHHHHh----------------------------c-CCCCcC-HHH---HHHHH-
Confidence 76654 44 7899888777655410 0 111111 111 12222
Q ss_pred HHHhCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEcCCCCcceEEEecCC-HHHHHHHHHHcCCeeeee---cCCeEEEE
Q 001586 435 AVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD-AHAIASAAYKIEMNLRVV---DSNTVTAS 510 (1049)
Q Consensus 435 ~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~g~~~v~~~~~~~~v~i~~~~-~~~v~~~L~~~gI~~~~~---~~~~vris 510 (1049)
..+..++-+++..++..++.+++.+.|++.| +++..+ ...-+.+.++. ..++.+.|.++||.++.. .++.+|++
T Consensus 273 ~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~g-~~~~~~-~~~f~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~Ris 350 (370)
T PRK09105 273 ASLRDPKLVPQRRAENAAVREDTIAWLKKKG-YKCTPS-QANCFMVDVKRPAKAVADAMAKQGVFIGRSWPIWPNWVRVT 350 (370)
T ss_pred HHHhCHHHHHHHHHHHHHHHHHHHHHHHHCC-CCcCCC-CCcEEEEeCCCCHHHHHHHHHHCCcEEecCCCCCCCeEEEE
Confidence 1122233356666777788889999999886 776532 11223355543 778999999999988432 25789999
Q ss_pred eccCCCHHHHHHHHHHHh
Q 001586 511 FDETTTLEDVDKLFIVFA 528 (1049)
Q Consensus 511 ~~~~~t~edid~lv~aL~ 528 (1049)
+. +.+++++|+++|.
T Consensus 351 ~~---~~~~~~~l~~al~ 365 (370)
T PRK09105 351 VG---SEEEMAAFRSAFA 365 (370)
T ss_pred cC---CHHHHHHHHHHHH
Confidence 77 6899999999985
No 466
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=99.46 E-value=4.1e-12 Score=141.98 Aligned_cols=296 Identities=18% Similarity=0.137 Sum_probs=183.0
Q ss_pred HHHHHHHHHhccccCcCccccccccccccCccccc----cccccC-cccccCCCCCchhhhhcHHHHHHHHHHHHHHhhC
Q 001586 572 ELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTE----MMPVTW-PSFANIHPFAPADQAQGYQEMFNNLGEWLCTITG 646 (1049)
Q Consensus 572 e~~~~l~~l~~~d~~~~~~~i~lGs~t~~~~~~~~----~~~~~~-~~f~~~~P~~p~e~~~G~~~~i~el~~~la~l~G 646 (1049)
.++-++.+++.+.... .+||-|....++..- +.-+.+ +.+..|++ .-|..++..-+.+++++++|
T Consensus 18 ~vw~e~~~la~e~~~~----~~LgqGfp~~~~P~fv~ea~~~~~~~~~~~qYt~------~~G~p~L~~aL~k~~se~~~ 87 (420)
T KOG0257|consen 18 YVWTEINRLAAEHKVP----NPLGQGFPDFPPPKFVTEAAKNAAKEPSTNQYTR------GYGLPQLRKALAKAYSEFYG 87 (420)
T ss_pred cHHHHHHHHHHhcCCC----CcccCCCCCCCCcHHHHHHHHHHhccchhccccc------cCCchHHHHHHHHHHHHHhc
Confidence 6777777777765432 137766554433211 111122 22333433 23667888888999999887
Q ss_pred CCc---cccccCchHH-HHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCEEEEEcCC--------CCCC
Q 001586 647 FDS---FSLQPNAGAA-GEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTD--------AKGN 714 (1049)
Q Consensus 647 ~~~---~~l~~~sGa~-ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~Vv~V~~d--------~~g~ 714 (1049)
... ..+..++||. +.++.+++ +. ..+|+|+|.+.+.-.+-....|.|...+.|+.. .+..
T Consensus 88 ~~~~~~~eVlVT~GA~~ai~~~~~~---l~-----~~GDeVii~eP~fd~Y~~~~~maG~tpv~v~~~~~~g~~~s~~~~ 159 (420)
T KOG0257|consen 88 GLLDPDDEVLVTAGANEAISSALLG---LL-----NPGDEVIVFEPFFDCYIPQVVMAGGTPVFVPLKPKEGNVSSSDWT 159 (420)
T ss_pred cccCCcccEEEecCchHHHHHHHHH---Hc-----CCCCEEEEecCcchhhhhHHhhcCCcceeeccccccccccCcccc
Confidence 643 2356666654 33333333 22 268999998875544444578999999999875 3478
Q ss_pred CCHHHHHHHHHhcCCCeEEEEEEcCC-cccccc--ccHHHHHHHHHHcCCEEEEecccc-ccccCc------CCCCccCC
Q 001586 715 INIEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANM-NAQVGL------TSPGYIGA 784 (1049)
Q Consensus 715 iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~--~di~eI~~lah~~G~ll~vD~A~~-~a~~gl------~~Pg~~Ga 784 (1049)
+|.++|+.+++ ++|++|++.+|+ .+|-+- +.+++|+++|++||.+|+.|.++- ...-+. ..||.+..
T Consensus 160 ~D~~~le~~~t---~kTk~Ii~ntPhNPtGkvfsReeLe~ia~l~~k~~~lvisDevYe~~v~d~~~h~r~aslPgm~er 236 (420)
T KOG0257|consen 160 LDPEELESKIT---EKTKAIILNTPHNPTGKVFSREELERIAELCKKHGLLVISDEVYEWLVYDGNKHIRIASLPGMYER 236 (420)
T ss_pred CChHHHHhhcc---CCccEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEEhhHhHHHhhCCCcceeeecCCchhhe
Confidence 99999999998 899999999994 689553 469999999999999999999752 111111 13787777
Q ss_pred cEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHc
Q 001586 785 DVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMG 864 (1049)
Q Consensus 785 Di~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG 864 (1049)
-+-++|+.|+|++ -|+.+|+++..+++...+. .+.. .. .-+|+++. |...+.+-..-+.+..
T Consensus 237 titvgS~gKtf~~----TGWrlGW~igp~~L~~~~~--~vh~----------~~-~~~~~Tp~-q~A~a~a~~~~~~~~~ 298 (420)
T KOG0257|consen 237 TITVGSFGKTFGV----TGWRLGWAIGPKHLYSALF--PVHQ----------NF-VFTCPTPI-QEASAAAFALELACLQ 298 (420)
T ss_pred EEEeccccceeee----eeeeeeeeechHHhhhhHH--HHhh----------cc-ccccCcHH-HHHHHHHHhhhhhccC
Confidence 7889999999964 5899999999877765431 1100 01 11222232 2211111111111222
Q ss_pred hhh--HHH-HHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeEEEEecc
Q 001586 865 SKG--LTE-ASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLR 910 (1049)
Q Consensus 865 ~eG--l~~-~~~~~~~~a~yL~~~L~~~-~~v~~~g~~g~~~~e~iv~~~ 910 (1049)
.+| +.. ..+...++.+.|++.|.++ +++. +++|..+ +++|+.
T Consensus 299 p~~~y~~~~~~~~y~~krdil~k~L~~lg~~v~--~p~gayy--l~adfs 344 (420)
T KOG0257|consen 299 PGGSYFITELVKEYKEKRDILAKALEELGLKVT--GPEGAYY--LWADFS 344 (420)
T ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHhcCCccc--cCCCceE--EEEecc
Confidence 232 222 5566678899999999987 5543 3344332 445654
No 467
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.45 E-value=5.6e-12 Score=146.17 Aligned_cols=209 Identities=20% Similarity=0.198 Sum_probs=142.1
Q ss_pred HHHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccH----HHHHhcCCEEEEEcC
Q 001586 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNP----ATAAMCGMKIVSVGT 709 (1049)
Q Consensus 634 i~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~p----a~a~~~G~~Vv~V~~ 709 (1049)
..++++.++++.|.+.. +..++|.++..++ +++ . .++++||++...++... ..+...|++++.++.
T Consensus 54 ~~~le~~la~l~g~~~~-~~~~sG~~ai~~~-~~l---l-----~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~ 123 (366)
T PRK08247 54 RGVLEQAIADLEGGDQG-FACSSGMAAIQLV-MSL---F-----RSGDELIVSSDLYGGTYRLFEEHWKKWNVRFVYVNT 123 (366)
T ss_pred HHHHHHHHHHHhCCCcE-EEEcCHHHHHHHH-HHH---h-----CCCCEEEEecCCcCcHHHHHHHHhhccCceEEEECC
Confidence 45789999999999775 6677777666332 221 1 24678998876555422 234568999999886
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEEcCC-ccccccccHHHHHHHHHHcCCEEEEeccccccccCcCCCCccCCcEEE
Q 001586 710 DAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1049)
Q Consensus 710 d~~g~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~Pg~~GaDi~~ 788 (1049)
.|+++++++++ ++|++|++++|+ .+|... |+++|+++||++|+++++|.++... .+..|.+.|+|+++
T Consensus 124 -----~d~~~l~~~i~---~~tklv~le~P~NP~~~~~-dl~~I~~la~~~g~~lIvD~t~~~~--~~~~p~~~g~di~i 192 (366)
T PRK08247 124 -----ASLKAIEQAIT---PNTKAIFIETPTNPLMQET-DIAAIAKIAKKHGLLLIVDNTFYTP--VLQRPLEEGADIVI 192 (366)
T ss_pred -----CCHHHHHHhcc---cCceEEEEECCCCCCCcHH-HHHHHHHHHHHcCCEEEEECCCccc--cccCchhcCCcEEE
Confidence 48999999997 789999999995 578777 8999999999999999999886422 23456678999999
Q ss_pred eCCCcccccCCCCCCCceeEEEEc-ccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhh
Q 001586 789 LNLHKTFCIPHGGGGPGMGPIGVK-KHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (1049)
Q Consensus 789 ~s~hK~f~~P~g~GGPg~G~i~~~-~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eG 867 (1049)
.|++|+++ |.++-..|+++++ +.+...+.. . + ...+ .+.+++ .+| +...+-+.
T Consensus 193 ~S~sK~~~---g~~d~~~G~iv~~~~~l~~~~~~--~----------~-~~~g-~~~s~~-------~a~--l~~~~l~t 246 (366)
T PRK08247 193 HSATKYLG---GHNDVLAGLVVAKGQELCERLAY--Y----------Q-NAAG-AVLSPF-------DSW--LLIRGMKT 246 (366)
T ss_pred eecceecc---CCCceeeeEEecChHHHHHHHHH--H----------H-HhcC-CCCChH-------HHH--HHHhccCc
Confidence 99999985 1122246777776 444333210 0 0 0011 111111 122 33334455
Q ss_pred HHHHHHHHHHHHHHHHHHHhcc
Q 001586 868 LTEASKIAILNANYMAKRLEKH 889 (1049)
Q Consensus 868 l~~~~~~~~~~a~yL~~~L~~~ 889 (1049)
+..+.++..+++..+.+.|+++
T Consensus 247 l~~r~~~~~~~a~~l~~~L~~~ 268 (366)
T PRK08247 247 LALRMRQHEENAKAIAAFLNEQ 268 (366)
T ss_pred HHHHHHHHHHHHHHHHHHHHhC
Confidence 6666677788999999999986
No 468
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.45 E-value=4.4e-11 Score=139.94 Aligned_cols=306 Identities=11% Similarity=0.091 Sum_probs=186.6
Q ss_pred ccCCCCCCCCCcHHHHHHHHh---CCccccccCCChhhHhhhHHHHHHHHHHHHHHHhCCC---CcceEeccchHHHHHH
Q 001586 170 FIGMGYYNTHVPPVILRNIME---NPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLP---MSNASLLDEGTAAAEA 243 (1049)
Q Consensus 170 ~lG~g~y~~~~p~~i~~~~~~---~~~~~t~ytpyq~e~sqg~le~l~e~q~~ia~L~G~~---~~n~sl~~~~Ta~~eA 243 (1049)
.+|.|..+...|+.+.+.+.+ ++. ...|.+ .+|..+....+++.+++.+|.+ ..++.+++|++.++..
T Consensus 31 ~l~~g~~~~~~~~~~~~a~~~~~~~~~-~~~Y~~-----~~G~~~lr~~~~~~l~~~~g~~~~~~~~i~~t~G~~~~l~~ 104 (389)
T PRK05957 31 SLGQGVVSYPPPPEAIEALNNFLANPE-NHKYQA-----VQGIPPLLEAITQKLQQDNGIELNNEQAIVVTAGSNMAFMN 104 (389)
T ss_pred EccCCCCCCCCCHHHHHHHHHHHhCCC-CCCCCC-----CCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCChHHHHHH
Confidence 467777765566666544432 221 112332 3666677777888999999974 4578888999877766
Q ss_pred HHHHhhhccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc--------chhhc-cCCCEeEEEEEcC-CCCeeec
Q 001586 244 MAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--------KDIDY-KSGDVCGVLVQYP-GTEGEVL 313 (1049)
Q Consensus 244 ~~~a~~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~~--------~~l~~-l~~~t~~V~v~~p-n~~G~i~ 313 (1049)
+.+++ . ++||+|++++-.|+.....+ +..|++++.++. +++++ +++++++|++.+| |++|.+.
T Consensus 105 ~~~~~-~--~~gd~Vlv~~P~y~~~~~~~----~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~klv~~~~p~NPtG~~~ 177 (389)
T PRK05957 105 AILAI-T--DPGDEIILNTPYYFNHEMAI----TMAGCQPILVPTDDNYQLQPEAIEQAITPKTRAIVTISPNNPTGVVY 177 (389)
T ss_pred HHHHh-c--CCCCEEEEeCCCCcCHHHHH----HhcCCEEEEeecCCCCCcCHHHHHHhcCcCceEEEEeCCCCCCCcCc
Confidence 55554 2 37899999998887765544 346888887755 34555 6778999999888 7899988
Q ss_pred c---HHHHHHHHHhCCcEEEEEecccc---ccC-C-CC----CCcccceEEEecC-ccccccCCCCCCc--eEEEEEchh
Q 001586 314 D---YGDFIKNAHANGVKVVMATDLLA---LTI-L-KP----PGELGADIVVGSA-QRFGVPMGYGGPH--AAFLATSQE 378 (1049)
Q Consensus 314 d---i~~I~~~ah~~galliV~a~~~a---lg~-l-~~----p~~~GaDivvgs~-k~lg~P~~~GGP~--~G~l~~~~~ 378 (1049)
+ +++|+++||++|++++++. ..+ ..- . .+ +...+--|+++|. |.||. || .|++++.++
T Consensus 178 ~~~~~~~i~~~a~~~~~~li~De-~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~------~GlRiG~~~~~~~ 250 (389)
T PRK05957 178 PEALLRAVNQICAEHGIYHISDE-AYEYFTYDGVKHFSPGSIPGSGNHTISLYSLSKAYGF------ASWRIGYMVIPIH 250 (389)
T ss_pred CHHHHHHHHHHHHHcCcEEEEec-cchhccCCCCCccChhhCCCccCcEEEEecchhhccC------ccceeEEEecCHH
Confidence 6 9999999999999999943 211 110 0 01 1112233667775 76643 45 789988887
Q ss_pred HHhcCCCceeeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHH-HHHHhCcchHHHHHHHHHHHHHHH
Q 001586 379 YKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAM-YAVYHGPEGLKTIAQRVHGLAGTF 457 (1049)
Q Consensus 379 l~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irrekaTsni~t~~~l~a~~aa~-y~~~~g~~Gl~~ia~~~~~~a~~l 457 (1049)
+++++... +.+...|++.. +..+++ .+ ..+..-+++..++..++.+++
T Consensus 251 ~~~~~~~~----------------------------~~~~~~~~~~~--~q~~~~~~l-~~~~~~~~~~~~~~~~~r~~l 299 (389)
T PRK05957 251 LLEAIKKI----------------------------QDTILICPPVV--SQYAALGAL-QVGKSYCQQHLPEIAQVRQIL 299 (389)
T ss_pred HHHHHHHH----------------------------HhhcccCCCcH--HHHHHHHHH-hCChHHHHHHHHHHHHHHHHH
Confidence 76655210 11112222211 111111 11 112222566667777888889
Q ss_pred HHHhhcCCCe-EEcCCCCcc-eEEEecC-C--HHHHHHHHH-HcCCeeeee-----c-CCeEEEEeccCCCHHHHHHHHH
Q 001586 458 ALGLKKLGTV-EVQGLPFFD-TVKVKCA-D--AHAIASAAY-KIEMNLRVV-----D-SNTVTASFDETTTLEDVDKLFI 525 (1049)
Q Consensus 458 ~~~L~~~g~~-~v~~~~~~~-~v~i~~~-~--~~~v~~~L~-~~gI~~~~~-----~-~~~vris~~~~~t~edid~lv~ 525 (1049)
.+.|++++++ .+.. +... -+.++++ + ..++.++|. ++||.+... . ++.+|+|+... +++++++.++
T Consensus 300 ~~~L~~~~~~~~~~~-~~gg~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~-~~~~l~~~~~ 377 (389)
T PRK05957 300 LKSLGQLQDRCTLHP-ANGAFYCFLKVNTDLNDFELVKQLIREYRVAVIPGTTFGMKNGCYLRIAYGAL-QKATAKEGIE 377 (389)
T ss_pred HHHHHhcCCCccccC-CCeeEEEEEeCCCCCChHHHHHHHHHHCCEEEccchhhCCCCCCEEEEEEecC-CHHHHHHHHH
Confidence 9999877433 3322 2111 1223433 2 678999986 579987542 1 35899999654 4666666666
Q ss_pred HHh
Q 001586 526 VFA 528 (1049)
Q Consensus 526 aL~ 528 (1049)
.|.
T Consensus 378 ~l~ 380 (389)
T PRK05957 378 RLV 380 (389)
T ss_pred HHH
Confidence 554
No 469
>PTZ00377 alanine aminotransferase; Provisional
Probab=99.45 E-value=3.9e-11 Score=144.18 Aligned_cols=312 Identities=15% Similarity=0.128 Sum_probs=177.3
Q ss_pred hcHHHHHHHHHHHHHHhhCCCc--cccccCchHH-HHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCEE
Q 001586 628 QGYQEMFNNLGEWLCTITGFDS--FSLQPNAGAA-GEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKI 704 (1049)
Q Consensus 628 ~G~~~~i~el~~~la~l~G~~~--~~l~~~sGa~-ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~V 704 (1049)
+|..++.+.+.+++.+..|.+. ..+..++|++ |.. ++++.+.. .++|+|+++...+..+...++..|.++
T Consensus 115 ~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~---~~~~~l~~----~~gD~Vlv~~P~y~~y~~~~~~~g~~~ 187 (481)
T PTZ00377 115 AGYPFVRKAVAAFIERRDGVPKDPSDIFLTDGASSGIK---LLLQLLIG----DPSDGVMIPIPQYPLYSAAITLLGGKQ 187 (481)
T ss_pred cCCHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHHH---HHHHHhcc----CCCCEEEECCCCchhHHHHHHHcCCEE
Confidence 4655666666666666556443 3455555544 443 23333211 257899999887766666788899999
Q ss_pred EEEcCCCC--CCCCHHHHHHHHHhc---CCCeEEEEEEcC-Ccccccc--ccHHHHHHHHHHcCCEEEEeccccc-cc-c
Q 001586 705 VSVGTDAK--GNINIEELRKAAEAN---RDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMN-AQ-V 774 (1049)
Q Consensus 705 v~V~~d~~--g~iD~~~L~~~i~~~---~~~taaV~it~P-n~~G~i~--~di~eI~~lah~~G~ll~vD~A~~~-a~-~ 774 (1049)
+.++++++ ..+|+++|+++++.. ..++++|++.+| |.+|.+- +.+++|+++|+++|+++++|.++.. .+ .
T Consensus 188 v~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~~s~e~~~~i~~~a~~~~~~iI~De~Y~~l~~~~ 267 (481)
T PTZ00377 188 VPYYLDEEKGWSLDQEELEEAYEQAVRNGITPRALVVINPGNPTGQVLTRDVMEEIIKFCYEKGIVLMADEVYQENIYDG 267 (481)
T ss_pred EEEEeccccCCCCCHHHHHHHHHHHHhcCCCeeEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhHhhccCC
Confidence 99998753 479999999998731 127899988999 5699875 2489999999999999999998632 11 1
Q ss_pred C--cCCC----CccCC------c-EEEeCCCccc-ccCCCCCCCceeEEEE---cccccccCCCCccccCCCCCCCCCCC
Q 001586 775 G--LTSP----GYIGA------D-VCHLNLHKTF-CIPHGGGGPGMGPIGV---KKHLAPFLPSHPVVSTGGIPAPEKSQ 837 (1049)
Q Consensus 775 g--l~~P----g~~Ga------D-i~~~s~hK~f-~~P~g~GGPg~G~i~~---~~~l~~~lpg~~vg~t~~~~~~~~~~ 837 (1049)
+ +.+. ..+.. . |++.|+.|+| ++| |.++|++++ .+++...+-.. .
T Consensus 268 ~~~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~----GlRiG~~~~~~~p~~li~~l~~~--------------~ 329 (481)
T PTZ00377 268 EKPFISFRKVLLELPAEYNTDVELVSFHSTSKGIIGEC----GRRGGYFELTNIPPEVREQIYKL--------------A 329 (481)
T ss_pred CCCcccHHHHHHhhcccccCCeEEEEEecCCcccccCC----cCceEEEEEeCCCHHHHHHHHHH--------------h
Confidence 1 1010 01111 1 4556788874 444 789999987 55555433100 0
Q ss_pred CCCCCCccchhhHHHHHHHHHHHHH--Hchhh---HH----HHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeEEEEe
Q 001586 838 PLGTIAAAPWGSALILPISYTYIAM--MGSKG---LT----EASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVD 908 (1049)
Q Consensus 838 ~t~~i~sa~~g~~~~~~~a~a~l~~--lG~eG---l~----~~~~~~~~~a~yL~~~L~~~~~v~~~g~~g~~~~e~iv~ 908 (1049)
. ...+++..++.. +.+++.. .+... +. +..+...++.+++.+.|+++..+.+..+++.++ +.++
T Consensus 330 ~-~~~~~~~~~Q~a----~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~g~~~~~p~gg~f--l~~~ 402 (481)
T PTZ00377 330 S-INLCSNVVGQLM----TGLMCNPPREGDASYPLYKRERDAIFTSLKRRAELLTDELNKIEGVSCQPVEGAMY--AFPR 402 (481)
T ss_pred h-eecCCChHHHHH----HHHHhCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCeeEE--EEee
Confidence 0 111221122221 2222211 01111 11 111223456778888887752232223333222 2223
Q ss_pred cc--C-ccc---cCCC-CHHHHH-HHHHHCCccc-CCCCCC---CCCEEEEEccCCCCHHHHHHHHHHHHHHHHHHH
Q 001586 909 LR--G-LKN---TAGI-EPEDVA-KRLMDYGFHG-PTMSWP---VPGTLMIEPTESESKEELDRYCDALISIREEIA 973 (1049)
Q Consensus 909 ~~--~-~~~---~~g~-~~~~v~-k~L~~~Gi~~-~~~~~p---~~~~lri~~t~~~t~eeid~fv~aL~~i~~~i~ 973 (1049)
++ . +.. ..++ +..+++ +.|.++|+.+ +.-.|. ..+++|+++. .+.+++++.++.|.++++...
T Consensus 403 ~~l~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~F~~~~~~~~~Rls~~--~~~e~l~~~l~rl~~~~~~~~ 477 (481)
T PTZ00377 403 IELPEKAIQEAKERGLAPDVLYCLELLESTGIVVVPGSGFGQKPGTYHFRITIL--PPEEQIEEMVKKIKEFHESFM 477 (481)
T ss_pred ccCchhhHHHHHhcCCCcHHHHHHHHHHHcCEEEeCCcccCCCCCCCEEEEEEC--CCHHHHHHHHHHHHHHHHHHH
Confidence 32 0 000 0001 122333 4566789975 333342 2368999997 567899999999998876644
No 470
>PRK08636 aspartate aminotransferase; Provisional
Probab=99.45 E-value=2.4e-11 Score=142.83 Aligned_cols=306 Identities=12% Similarity=0.150 Sum_probs=182.6
Q ss_pred hhcHHHHHHHHHHHHHHhhCCC--cc-ccccCchHH-HHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCC
Q 001586 627 AQGYQEMFNNLGEWLCTITGFD--SF-SLQPNAGAA-GEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGM 702 (1049)
Q Consensus 627 ~~G~~~~i~el~~~la~l~G~~--~~-~l~~~sGa~-ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~ 702 (1049)
.+|..++...+.+++.+.+|.+ .. .+..++|++ |. .++++.+. .+++.|++++..+..+...+++.|+
T Consensus 70 ~~G~~~lR~~ia~~l~~~~~~~~~~~~~I~it~G~~~al---~~~~~~l~-----~~gd~Vlv~~P~y~~~~~~~~~~g~ 141 (403)
T PRK08636 70 SKGIYKLRLAICNWYKRKYNVDLDPETEVVATMGSKEGY---VHLVQAIT-----NPGDVAIVPDPAYPIHSQAFILAGG 141 (403)
T ss_pred CCCCHHHHHHHHHHHHHHhCCCCCCCCeEEECCChHHHH---HHHHHHhC-----CCCCEEEEcCCCCcchHHHHHhcCC
Confidence 3577677777778887777754 33 355555554 33 33333331 2578999998877666667889999
Q ss_pred EEEEEcCC--CCCCCCHHH----HHHHHHhcCCCeEEEEEEcC-Ccccccc--ccHHHHHHHHHHcCCEEEEeccccc-c
Q 001586 703 KIVSVGTD--AKGNINIEE----LRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMN-A 772 (1049)
Q Consensus 703 ~Vv~V~~d--~~g~iD~~~----L~~~i~~~~~~taaV~it~P-n~~G~i~--~di~eI~~lah~~G~ll~vD~A~~~-a 772 (1049)
+++.++.+ ++..+|+++ ++++++++..++++|++++| |.+|.+- +.+++|.++|+++++++++|.++.. .
T Consensus 142 ~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~i~~~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~ 221 (403)
T PRK08636 142 NVHKMPLEYNEDFELDEDQFFENLEKALRESSPKPKYVVVNFPHNPTTATVEKSFYERLVALAKKERFYIISDIAYADIT 221 (403)
T ss_pred EEEEEeccccccCccChhhhhhHHHHHHhhccCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccchhhc
Confidence 99999875 335788875 46666655568999999998 4689774 3589999999999999999998641 1
Q ss_pred ccCcCCC--Ccc--CCc--EEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccc
Q 001586 773 QVGLTSP--GYI--GAD--VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAP 846 (1049)
Q Consensus 773 ~~gl~~P--g~~--GaD--i~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~ 846 (1049)
..+...| ..+ ..| |.+.|+.|+|+.| |-++|+++.++++...+... ......+.++ +
T Consensus 222 ~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~----GlRiG~iv~~~~li~~~~~~------------~~~~~~~~~~-~ 284 (403)
T PRK08636 222 FDGYKTPSILEVEGAKDVAVESYTLSKSYNMA----GWRVGFVVGNKKLVGALKKI------------KSWLDYGMFT-P 284 (403)
T ss_pred cCCCCCCChhcCCCccccEEEEEecccccCCc----cceeeeeeCCHHHHHHHHHH------------HHHhcccCCh-H
Confidence 1111111 111 123 3456788888544 78899999877665443210 0000011111 1
Q ss_pred hhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeEEEEeccCccccCCCCHHHHHH
Q 001586 847 WGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAK 925 (1049)
Q Consensus 847 ~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~-~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k 925 (1049)
.+ .+++ .++. -..+-+++..+...++.+++.+.|++. +.+. .+.+..+ +.+++++.. .+.+..++++
T Consensus 285 -~q---~~~~-~~~~-~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~--~p~~g~~--~~~~l~~~~--~~~~~~~l~~ 352 (403)
T PRK08636 285 -IQ---VAAT-IALD-GDQSCVEEIRETYRKRRDVLIESFANAGWELQ--KPRASMF--VWAKIPEPA--RHLGSLEFSK 352 (403)
T ss_pred -HH---HHHH-HHHh-CcHHHHHHHHHHHHHHHHHHHHHHHHCCCccc--CCCcceE--EEEECCCcc--CCCCHHHHHH
Confidence 11 1111 1221 122334445555666778888888774 3322 2222222 456664210 0234577887
Q ss_pred HHH-HCCcccC-CCCCC--CCCEEEEEccCCCCHHHHHHHHHHHHHHHHH
Q 001586 926 RLM-DYGFHGP-TMSWP--VPGTLMIEPTESESKEELDRYCDALISIREE 971 (1049)
Q Consensus 926 ~L~-~~Gi~~~-~~~~p--~~~~lri~~t~~~t~eeid~fv~aL~~i~~~ 971 (1049)
.|. ++||.+. .-.|. ..+++||++. .+.+++++.++.|+++++.
T Consensus 353 ~ll~~~gV~v~pg~~f~~~~~~~iRi~~~--~~~~~l~~~~~rl~~~l~~ 400 (403)
T PRK08636 353 QLLTEAKVAVSPGIGFGEYGDEYVRIALI--ENENRIRQAARNIKKFLKE 400 (403)
T ss_pred HHHHhCCEEEecchhhCcCCCCeEEEEec--CCHHHHHHHHHHHHHHHHh
Confidence 654 6898863 32343 2478999996 4677777777777666543
No 471
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.45 E-value=3.3e-12 Score=147.86 Aligned_cols=210 Identities=20% Similarity=0.210 Sum_probs=141.2
Q ss_pred HHHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHH----HHhcCCEEEEEcC
Q 001586 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGT 709 (1049)
Q Consensus 634 i~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~----a~~~G~~Vv~V~~ 709 (1049)
...+++.|++|.|.+.+ +..+||-.|..++++++. +.+++||++....+..... ....|+++.+++.
T Consensus 57 ~~~le~~la~Le~g~~a-~~~~SGmaAi~~~l~~ll--------~~Gd~iv~~~~~Y~~t~~~~~~~l~~~gv~v~~~d~ 127 (386)
T PF01053_consen 57 VRALEQRLAALEGGEDA-LLFSSGMAAISAALLALL--------KPGDHIVASDDLYGGTYRLLEELLPRFGVEVTFVDP 127 (386)
T ss_dssp HHHHHHHHHHHHT-SEE-EEESSHHHHHHHHHHHHS---------TTBEEEEESSSSHHHHHHHHHCHHHTTSEEEEEST
T ss_pred HHHHHHHHHHhhcccce-eeccchHHHHHHHHHhhc--------ccCCceEecCCccCcchhhhhhhhcccCcEEEEeCc
Confidence 44788999999998765 445677666655555442 2467888876544332222 4458999999987
Q ss_pred CCCCCCCHHHHHHHHHhcCCCeEEEEEEcC-CccccccccHHHHHHHHHHcC-CEEEEeccccccccCcCCCCccCCcEE
Q 001586 710 DAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNG-GQVYMDGANMNAQVGLTSPGYIGADVC 787 (1049)
Q Consensus 710 d~~g~iD~~~L~~~i~~~~~~taaV~it~P-n~~G~i~~di~eI~~lah~~G-~ll~vD~A~~~a~~gl~~Pg~~GaDi~ 787 (1049)
.|+++|+++++ ++|++|+++.| |.+.-+. ||++|+++||++| ++++||.+ ++-..+.+|-++|+||+
T Consensus 128 -----~d~~~l~~~l~---~~t~~v~~EspsNP~l~v~-Dl~~i~~~a~~~g~~~~vVDnT--~atp~~~~pL~~GaDiv 196 (386)
T PF01053_consen 128 -----TDLEALEAALR---PNTKLVFLESPSNPTLEVP-DLEAIAKLAKEHGDILVVVDNT--FATPYNQNPLELGADIV 196 (386)
T ss_dssp -----TSHHHHHHHHC---TTEEEEEEESSBTTTTB----HHHHHHHHHHTTT-EEEEECT--TTHTTTC-GGGGT-SEE
T ss_pred -----hhHHHHHhhcc---ccceEEEEEcCCCcccccc-cHHHHHHHHHHhCCceEEeecc--ccceeeeccCcCCceEE
Confidence 58999999998 79999999999 4565554 8999999999999 99999965 33344567889999999
Q ss_pred EeCCCcccccCCCCCCCceeEEEEcc--cccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHch
Q 001586 788 HLNLHKTFCIPHGGGGPGMGPIGVKK--HLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGS 865 (1049)
Q Consensus 788 ~~s~hK~f~~P~g~GGPg~G~i~~~~--~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~ 865 (1049)
+.|..|.++ |.|.--+|.++++. .+...+.. . .+..+...+ . --+|+...|-
T Consensus 197 v~S~TKyl~---Ghsdv~~G~vv~~~~~~~~~~l~~--~-----------~~~~G~~~~--------p--~da~ll~rgl 250 (386)
T PF01053_consen 197 VHSATKYLS---GHSDVMGGAVVVNGSSELYDRLRE--F-----------RRLLGATLS--------P--FDAWLLLRGL 250 (386)
T ss_dssp EEETTTTTT---TSSSE-EEEEEESSHHHHHHHHHH--H-----------HHHHT-B----------H--HHHHHHHHHH
T ss_pred Eeecccccc---CCcceeeEEEEECchhhhhhhhcc--h-----------hhhcCccch--------H--HHHHHHhcCC
Confidence 999999984 12222368888775 34332210 0 001122111 1 1244556677
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhcc
Q 001586 866 KGLTEASKIAILNANYMAKRLEKH 889 (1049)
Q Consensus 866 eGl~~~~~~~~~~a~yL~~~L~~~ 889 (1049)
+.+..+.++..++|..+++.|+++
T Consensus 251 ~Tl~~R~~~~~~nA~~lA~~L~~h 274 (386)
T PF01053_consen 251 RTLPLRMERQNENAEALAEFLEEH 274 (386)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHTS
T ss_pred CcHHHHHHHHHHHHHHHHHHHHhC
Confidence 788888899999999999999987
No 472
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=99.45 E-value=1.5e-11 Score=141.97 Aligned_cols=281 Identities=15% Similarity=0.154 Sum_probs=171.4
Q ss_pred HHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCEEEEEcCCCC--
Q 001586 635 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK-- 712 (1049)
Q Consensus 635 ~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~Vv~V~~d~~-- 712 (1049)
.++++.+++.++.+..++..++|++. +...+++.+ . + +.|+++....+.+...++..|++++.++.+.+
T Consensus 57 ~~lr~~ia~~~~~~~~~i~it~Ga~~--~l~~~~~~~--~----~-~~v~i~~P~y~~~~~~~~~~g~~~~~~~~~~~~~ 127 (354)
T PRK06358 57 LELRKRIASFEQLDLENVILGNGATE--LIFNIVKVT--K----P-KKVLILAPTFAEYERALKAFDAEIEYAELTEETN 127 (354)
T ss_pred HHHHHHHHHHhCCChhhEEECCCHHH--HHHHHHHHh--C----C-CcEEEecCChHHHHHHHHHcCCeeEEEeCccccC
Confidence 36778888888888776666666652 222333332 1 2 45788776555555557789999999998754
Q ss_pred CCCCHHHHHHHHHhcCCCeEEEEEEcCC-cccccc--ccHHHHHHHHHHcCCEEEEeccccccc-cCc-CCCC-cc-CCc
Q 001586 713 GNINIEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQ-VGL-TSPG-YI-GAD 785 (1049)
Q Consensus 713 g~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~--~di~eI~~lah~~G~ll~vD~A~~~a~-~gl-~~Pg-~~-GaD 785 (1049)
..+| +++.+++. +++++|++++|+ .+|.+- +.+++|.++|+++|+++++|.++..-. .+. .++. .. ..+
T Consensus 128 ~~~d-~~~~~~~~---~~~~~v~~~~P~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~ 203 (354)
T PRK06358 128 FAAN-EIVLEEIK---EEIDLVFLCNPNNPTGQLISKEEMKKILDKCEKRNIYLIIDEAFMDFLEENETISMINYLENFK 203 (354)
T ss_pred CCcc-HHHHHhhc---cCCCEEEEeCCCCCCCCccCHHHHHHHHHHHHhcCCEEEEeCcccccCCCccchhHHHhccCCC
Confidence 3688 67666665 568888899995 589775 248899999999999999999863111 110 0110 01 112
Q ss_pred --EEEeCCCcccccCCCCCCCceeEEEEc-ccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHH
Q 001586 786 --VCHLNLHKTFCIPHGGGGPGMGPIGVK-KHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAM 862 (1049)
Q Consensus 786 --i~~~s~hK~f~~P~g~GGPg~G~i~~~-~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~ 862 (1049)
++..|+.|+|++| |-++|++++. +.+...+.. ......+++ ..+ .++.+ .
T Consensus 204 ~vi~~~S~SK~~gl~----G~RiG~lv~~~~~~~~~~~~--------------~~~~~~~~~--~~q----~~~~~---~ 256 (354)
T PRK06358 204 NLIIIRAFTKFFAIP----GLRLGYGLTSNKNLAEKLLQ--------------MREPWSINT--FAD----LAGQT---L 256 (354)
T ss_pred CEEEEEechhhccCc----chhheeeecCCHHHHHHHHH--------------hCCCCcchH--HHH----HHHHH---H
Confidence 5567778887554 7889999874 444333210 000011111 111 11111 2
Q ss_pred Hchhh-HHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHHHCCcccCCC-CCC
Q 001586 863 MGSKG-LTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTM-SWP 940 (1049)
Q Consensus 863 lG~eG-l~~~~~~~~~~a~yL~~~L~~~~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~-~~p 940 (1049)
+..+. +.+..+...++.+++.+.|++...+.+..+.+.+ +++.++ +..+++++|.++||.+... .|+
T Consensus 257 l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~g~f---~~~~~~--------~~~~~~~~l~~~gI~v~~~~~f~ 325 (354)
T PRK06358 257 LDDKEYIKKTIQWIKEEKDFLYNGLSEFKGIKVYKPSVNF---IFFKLE--------KPIDLRKELLKKGILIRSCSNYR 325 (354)
T ss_pred hccHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEcCCcceE---EEEEcC--------chHHHHHHHHHCCeEEEECCCCC
Confidence 22222 2444455566778888999774222221222322 345543 2468999999999987532 343
Q ss_pred --CCCEEEEEccCCCCHHHHHHHHHHHHHHH
Q 001586 941 --VPGTLMIEPTESESKEELDRYCDALISIR 969 (1049)
Q Consensus 941 --~~~~lri~~t~~~t~eeid~fv~aL~~i~ 969 (1049)
..+++||++ .+.++.++|+++|.++.
T Consensus 326 ~~~~~~iRls~---~~~~~~~~l~~~l~~~~ 353 (354)
T PRK06358 326 GLDENYYRVAV---KSREDNKKLLKALEVIL 353 (354)
T ss_pred CCCCCEEEEEe---CCHHHHHHHHHHHHHHh
Confidence 246899998 46899999999998764
No 473
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.45 E-value=7.3e-11 Score=137.48 Aligned_cols=278 Identities=15% Similarity=0.157 Sum_probs=174.7
Q ss_pred hhHHHHHHHHHHHHHHHhC--CCCcceEeccchHHHHHHHHHHhhhccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEE
Q 001586 207 QGRLESLLNFQTMIADLTG--LPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVV 284 (1049)
Q Consensus 207 qg~le~l~e~q~~ia~L~G--~~~~n~sl~~~~Ta~~eA~~~a~~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~ 284 (1049)
+|..+....+.+.+.++.| .++.++.++.|++.+...++.++ .++||+|++++..|+.+...++ ..|++++
T Consensus 61 ~G~~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~al~~~~~~l---~~~gd~vl~~~p~y~~~~~~~~----~~g~~~~ 133 (382)
T PRK06108 61 LGIPELREALARYVSRLHGVATPPERIAVTSSGVQALMLAAQAL---VGPGDEVVAVTPLWPNLVAAPK----ILGARVV 133 (382)
T ss_pred CCCHHHHHHHHHHHHHHhCCCcCcceEEEeCChHHHHHHHHHHh---cCCCCEEEEeCCCccchHHHHH----HCCCEEE
Confidence 3433333334445555667 56678989999987666555443 2378999999999998777654 4688887
Q ss_pred EeCcc-----------hhhc-cCCCEeEEEEEcC-CCCeeec---cHHHHHHHHHhCCcEEEEEeccccccCCC----CC
Q 001586 285 VSDLK-----------DIDY-KSGDVCGVLVQYP-GTEGEVL---DYGDFIKNAHANGVKVVMATDLLALTILK----PP 344 (1049)
Q Consensus 285 ~v~~~-----------~l~~-l~~~t~~V~v~~p-n~~G~i~---di~~I~~~ah~~galliV~a~~~alg~l~----~p 344 (1049)
.++.+ ++++ +++++++|++++| |++|.+. ++++|+++|+++|++++++. ..+..... .+
T Consensus 134 ~v~~~~~~~~~~~d~~~l~~~~~~~~~~i~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De-~y~~~~~~~~~~~~ 212 (382)
T PRK06108 134 CVPLDFGGGGWTLDLDRLLAAITPRTRALFINSPNNPTGWTASRDDLRAILAHCRRHGLWIVADE-VYERLYYAPGGRAP 212 (382)
T ss_pred EeeCCCCCCCccCCHHHHHHhcCccceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEeh-hhhhhccCCCCCCC
Confidence 76552 3334 5678899999988 7899775 57889999999999999942 21111110 01
Q ss_pred ------CcccceEEEecC-ccccccCCCCCCceEEEEEchhHHhcCCCceeeeeecCCCCcceeeecccccccccccccC
Q 001586 345 ------GELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKAT 417 (1049)
Q Consensus 345 ------~~~GaDivvgs~-k~lg~P~~~GGP~~G~l~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irrekaT 417 (1049)
....-.++++|. |.|+.| |-..|++++++++++.+.... ..
T Consensus 213 ~~~~~~~~~~~~i~~~S~SK~~g~~----G~RiG~~~~~~~~~~~~~~~~--------------------------~~-- 260 (382)
T PRK06108 213 SFLDIAEPDDRIIFVNSFSKNWAMT----GWRLGWLVAPPALGQVLEKLI--------------------------EY-- 260 (382)
T ss_pred CHhhcCCCcCCEEEEeechhhccCc----ccceeeeeCCHHHHHHHHHHH--------------------------Hh--
Confidence 011235778786 877543 334799999887776551000 00
Q ss_pred CCccchhHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEcCCCCcceEEEecCC---HHHHHHHHH-
Q 001586 418 SNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD---AHAIASAAY- 493 (1049)
Q Consensus 418 sni~t~~~l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~g~~~v~~~~~~~~v~i~~~~---~~~v~~~L~- 493 (1049)
...|++.. +..++..+...+.+-++++.+++.++.+++.+.|+++.++++..+....-+.+.++. ..++.+.|.
T Consensus 261 ~~~~~~~~--~q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~ll~ 338 (382)
T PRK06108 261 NTSCVAQF--VQRAAVAALDEGEDFVAELVARLRRSRDHLVDALRALPGVEVAKPDGAMYAFFRIPGVTDSLALAKRLVD 338 (382)
T ss_pred cccCCChH--HHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCeeEEEEEeCCCCCCHHHHHHHHHH
Confidence 01111111 112222111233344678888888999999999988733776532111112334442 678888875
Q ss_pred HcCCeeeee------cCCeEEEEeccCCCHHHHHHHHHHHh
Q 001586 494 KIEMNLRVV------DSNTVTASFDETTTLEDVDKLFIVFA 528 (1049)
Q Consensus 494 ~~gI~~~~~------~~~~vris~~~~~t~edid~lv~aL~ 528 (1049)
++||.+... ..+.+|+|++. +.++++..++.|.
T Consensus 339 ~~gV~v~pg~~f~~~~~~~~Ris~~~--~~~~l~~~l~~l~ 377 (382)
T PRK06108 339 EAGLGLAPGTAFGPGGEGFLRWCFAR--DPARLDEAVERLR 377 (382)
T ss_pred hCCEEEeCchhhCCCCCCEEEEEecC--CHHHHHHHHHHHH
Confidence 579987432 14789999997 8899999888875
No 474
>PTZ00376 aspartate aminotransferase; Provisional
Probab=99.44 E-value=5.5e-12 Score=148.29 Aligned_cols=300 Identities=12% Similarity=0.120 Sum_probs=171.3
Q ss_pred hhcHHHHHHHHHHHHHHhhCC--Cccccc---cCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcC
Q 001586 627 AQGYQEMFNNLGEWLCTITGF--DSFSLQ---PNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCG 701 (1049)
Q Consensus 627 ~~G~~~~i~el~~~la~l~G~--~~~~l~---~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G 701 (1049)
.+|..++.+.+.+++....+. +...+. ..+|.+|...++++++.+. .++++|+++...+..+...+++.|
T Consensus 71 ~~G~~~lR~aia~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~~~-----~~Gd~Vlv~~P~y~~~~~~~~~~G 145 (404)
T PTZ00376 71 IEGLQSFIEAAQKLLFGEASYALAEKRIATVQALSGTGALRLGFEFLKRFL-----PAGTTVYVSNPTWPNHVNIFKSAG 145 (404)
T ss_pred CCCCHHHHHHHHHHhcCCCccccccCeEEEeeccCcchHHHHHHHHHHHhc-----CCCCEEEEcCCCchhHHHHHHHcC
Confidence 467666665556655443322 222333 3344445444444444432 257899999887766777789999
Q ss_pred CEEEEEcCC--CCCCCCHHHHHHHHHhcCCCeEEEEEEcC-Ccccccc--ccHHHHHHHHHHcCCEEEEeccccc-cccC
Q 001586 702 MKIVSVGTD--AKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMN-AQVG 775 (1049)
Q Consensus 702 ~~Vv~V~~d--~~g~iD~~~L~~~i~~~~~~taaV~it~P-n~~G~i~--~di~eI~~lah~~G~ll~vD~A~~~-a~~g 775 (1049)
++++.+|.. ++..+|+++++++++++.+++.++++.+| |.+|.+- +++++|+++|++||+++++|.++.. ...+
T Consensus 146 ~~~~~v~l~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~ 225 (404)
T PTZ00376 146 LNVKEYRYYDPKTKGLDFDGMLEDLRTAPNGSVVLLHACAHNPTGVDPTEEQWKEIADVMKRKNLIPFFDMAYQGFASGD 225 (404)
T ss_pred CceeeccccCcccCCcCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEehhhcCccCCC
Confidence 999999983 23679999999999754455677778888 4699774 3688999999999999999997531 1111
Q ss_pred c--C--CCC---ccCCc-EEEeCCCcccccCCCCCCCceeEEE---EcccccccCCCCccccCCCCCCCCCCCCCCCCCc
Q 001586 776 L--T--SPG---YIGAD-VCHLNLHKTFCIPHGGGGPGMGPIG---VKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAA 844 (1049)
Q Consensus 776 l--~--~Pg---~~GaD-i~~~s~hK~f~~P~g~GGPg~G~i~---~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~s 844 (1049)
. . .+. ..+.. +++.|+.|+|++| |.++|++. .++++...+-...... . .. ...+.
T Consensus 226 ~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~----GlRvG~~~~~~~~~~~~~~l~~~~~~~--------~-~~-~~~~~ 291 (404)
T PTZ00376 226 LDKDAYAIRLFAERGVEFLVAQSFSKNMGLY----GERIGALHIVCANKEEAANVLSQLKLI--------I-RP-MYSSP 291 (404)
T ss_pred HHHHHHHHHHHHhcCCcEEEEEeCCCccccc----ccccceEEEEeCCHHHHHHHHHHHHHH--------H-hh-hcCCC
Confidence 0 0 000 11112 5667788988765 78999984 3444322211000000 0 00 00111
Q ss_pred cchhhHHHHHHHHHHHHHHch------hhHHHHHHHHHHHHHHHHHHHhcc-CC--eeeccCCCceeeEEEEeccCcccc
Q 001586 845 APWGSALILPISYTYIAMMGS------KGLTEASKIAILNANYMAKRLEKH-YP--ILFRGVNGTVAHEFIVDLRGLKNT 915 (1049)
Q Consensus 845 a~~g~~~~~~~a~a~l~~lG~------eGl~~~~~~~~~~a~yL~~~L~~~-~~--v~~~g~~g~~~~e~iv~~~~~~~~ 915 (1049)
+...+ .++..++.. +. +-+++..++..++.+.+.+.|+++ .. +.+..+++.++ +.+++
T Consensus 292 ~~~~q----~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~p~gg~f--~~~~~------ 358 (404)
T PTZ00376 292 PIHGA----RIADRILSD-PELRAEWLSELKEMSGRIQNMRQLLYDELKALGSPGDWEHIINQIGMF--SFTGL------ 358 (404)
T ss_pred chHHH----HHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccccCceEE--EecCC------
Confidence 11111 112222211 10 112333445567778888888875 22 11112222221 12222
Q ss_pred CCCCHHHHHHHHHHC-CcccCCCCCCCCCEEEEEccCCCCHHHHHHHHHHHHHHHH
Q 001586 916 AGIEPEDVAKRLMDY-GFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIRE 970 (1049)
Q Consensus 916 ~g~~~~~v~k~L~~~-Gi~~~~~~~p~~~~lri~~t~~~t~eeid~fv~aL~~i~~ 970 (1049)
+ .+++++|.++ |+.+. | +. ||+++- .++++++.++++|++.+.
T Consensus 359 ---~-~~~~~~L~~~~~v~v~----p--~~-Ris~~~-~~~~~~~~~~~~l~~~~~ 402 (404)
T PTZ00376 359 ---T-KEQVERLIEKYHIYLL----D--NG-RISVAG-LTSKNVDYVAEAIHDVVR 402 (404)
T ss_pred ---C-HHHHHHHHHhCCEeec----C--CC-eEEEec-cCHHhHHHHHHHHHHHHh
Confidence 2 4678888866 98753 1 22 888853 578999999999998764
No 475
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=99.44 E-value=2.1e-11 Score=141.80 Aligned_cols=247 Identities=15% Similarity=0.123 Sum_probs=150.7
Q ss_pred CEEEEcCCCCCccHHHHHhcCCEEEEEcCCCC-CCCCHHHHHHHHHhc-CCCeEEEEEEcCC-ccccccc--cHHHHHHH
Q 001586 681 NVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK-GNINIEELRKAAEAN-RDNLSTLMVTYPS-THGVYEE--GIDEICKI 755 (1049)
Q Consensus 681 ~~VLip~saHg~~pa~a~~~G~~Vv~V~~d~~-g~iD~~~L~~~i~~~-~~~taaV~it~Pn-~~G~i~~--di~eI~~l 755 (1049)
++|+++...+..+...+++.|++++.++.+++ ..+|+++|++++++. ..++++|++++|+ .+|.+-+ .+++|.++
T Consensus 117 ~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~k~i~l~~P~NPTG~~~s~~~l~~l~~~ 196 (374)
T PRK02610 117 GSILVAEPTFSMYGILAQTLGIPVVRVGRDPETFEIDLAAAQSAIEQTQNPPVRVVFVVHPNSPTGNPLTAAELEWLRSL 196 (374)
T ss_pred CeEEEcCCChHHHHHHHHHcCCEEEEecCCcccCCCCHHHHHHHHHhhcCCCceEEEEeCCCCCCCCCCCHHHHHHHHhc
Confidence 37899887665556668899999999998654 689999999998731 1478999999995 5998851 34445444
Q ss_pred HHHcCCEEEEeccccccccCcCCCCcc-C-Cc-EEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCC
Q 001586 756 IHDNGGQVYMDGANMNAQVGLTSPGYI-G-AD-VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPA 832 (1049)
Q Consensus 756 ah~~G~ll~vD~A~~~a~~gl~~Pg~~-G-aD-i~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~ 832 (1049)
+ +++++++|.++.. +.....+... . .. |++.|+.|+|++| |-++|+++.++++.+.+-..
T Consensus 197 ~--~~~~iI~De~Y~~-~~~~~~~~~~~~~~~~ivi~SfSK~~g~~----GlRiG~~v~~~~l~~~l~~~---------- 259 (374)
T PRK02610 197 P--EDILVVIDEAYFE-FSQTTLVGELAQHPNWVILRTFSKAFRLA----AHRVGYAIGHPELIAVLEKV---------- 259 (374)
T ss_pred c--CCcEEEEeccccc-cCccchHHHHhcCCCEEEEEecchhccCc----ccceeeeecCHHHHHHHHHh----------
Confidence 4 4899999998631 1111111111 1 12 5667788888654 78899999887765543210
Q ss_pred CCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeEEEEeccCc
Q 001586 833 PEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGL 912 (1049)
Q Consensus 833 ~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~~~v~~~g~~g~~~~e~iv~~~~~ 912 (1049)
+...+++ ...+. ++.+++. ..+.+.+..+...+..+.+.+.|+.+..+... +.+..+ +.++++
T Consensus 260 ----~~~~~~~--~~~q~----a~~~~l~--~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~-p~~g~f--~~~~l~-- 322 (374)
T PRK02610 260 ----RLPYNLP--SFSQL----AAQLALE--HRQELLAAIPEILQERDRLYQALQELPQLRVW-PSAANF--LYLRLS-- 322 (374)
T ss_pred ----cCCCCCC--HHHHH----HHHHHhc--CHHHHHHHHHHHHHHHHHHHHHHHhCCCcEeC-CCcceE--EEEeCC--
Confidence 0001111 11121 1222222 12333333344455566777777654222111 122222 445654
Q ss_pred cccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEccCCCCHHHHHHHHHHHHHHHHH
Q 001586 913 KNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREE 971 (1049)
Q Consensus 913 ~~~~g~~~~~v~k~L~~~Gi~~~~~~~p~~~~lri~~t~~~t~eeid~fv~aL~~i~~~ 971 (1049)
.+.+..++.++|.++|+.+... .+++||++. +.++++++++.|++++..
T Consensus 323 ---~~~~~~~~~~~l~~~gi~v~~~----~~~lRls~~---~~~~~~~~l~~l~~~l~~ 371 (374)
T PRK02610 323 ---QDAALAALHQALKAQGTLVRHT----GGGLRITIG---TPEENQRTLERLQAALTQ 371 (374)
T ss_pred ---CCCCHHHHHHHHHHCCEEEEeC----CCeEEEeCC---CHHHHHHHHHHHHHHHhh
Confidence 2356788999999999987532 478999986 357789999888877543
No 476
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.44 E-value=3.7e-11 Score=141.05 Aligned_cols=276 Identities=16% Similarity=0.154 Sum_probs=171.6
Q ss_pred HHHHHHHHHHHHHhCCCCcceEeccchHHHHHHHHHHhh-hc----c--CCCCEEEEcC-CCCHHHHHHHHHh-------
Q 001586 211 ESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNN-IQ----K--GKKKTFIIAS-NCHPQTIDICITR------- 275 (1049)
Q Consensus 211 e~l~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a~~-~~----~--~~g~~Vlv~~-~~Hps~~~~l~~~------- 275 (1049)
+...++++.+++++|.+ .+.++++||.|.|+++.+.+ +. . .++++||+.. ..|.++...+..-
T Consensus 83 ~~~~~l~~~l~~~~~~~--~~~~~~SGs~A~e~al~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~~ 160 (401)
T PRK00854 83 DQLAPLYEELAALTGSH--KVLPMNSGAEAVETAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDARG 160 (401)
T ss_pred HHHHHHHHHHHhhCCCC--EEEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCceEEEECCCcCCccHHHHhccCCccccc
Confidence 34566778999999875 58888999999998875433 21 0 1235666544 6787766554210
Q ss_pred -hcCCCeEEEEeC---cchhhc-cCCCEeEEEEEcC-CCCeeecc----HHHHHHHHHhCCcEEEEEecccc-ccCCCC-
Q 001586 276 -ADGFDIKVVVSD---LKDIDY-KSGDVCGVLVQYP-GTEGEVLD----YGDFIKNAHANGVKVVMATDLLA-LTILKP- 343 (1049)
Q Consensus 276 -a~~~gi~v~~v~---~~~l~~-l~~~t~~V~v~~p-n~~G~i~d----i~~I~~~ah~~galliV~a~~~a-lg~l~~- 343 (1049)
.......+..++ ++++++ +.+++++|++.+| |++|.+.| +++|.++|+++|++++++ +..+ ++....
T Consensus 161 ~~~~~~~~~~~~~~~d~~~le~~i~~~~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~D-Ev~~g~g~~g~~ 239 (401)
T PRK00854 161 GFGPFTPGFRVVPFGDAEALEAAITPNTVAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILD-EIQTGLGRTGKL 239 (401)
T ss_pred cCCCCCCCeEEeCCCCHHHHHHHhCCCeEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEe-chhhCCCCCchH
Confidence 011122344443 456666 7788999999987 78999886 999999999999999994 2323 332110
Q ss_pred ----CCcccceEEEecCccccccCCCCCCceEEEEEchhHHhcCCCceeeeeecCCCCcceeeecccccccccccccCCC
Q 001586 344 ----PGELGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSN 419 (1049)
Q Consensus 344 ----p~~~GaDivvgs~k~lg~P~~~GGP~~G~l~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irrekaTsn 419 (1049)
......|+++. +|+|++ |.-..|++.+++++.+.+... .. + +.
T Consensus 240 ~~~~~~g~~~D~~~~-~K~l~g----g~~~ig~v~~~~~~~~~l~~~----------~~-----------------~-~t 286 (401)
T PRK00854 240 LAEEHEGIEADVTLI-GKALSG----GFYPVSAVLSNSEVLGVLKPG----------QH-----------------G-ST 286 (401)
T ss_pred hHHhhcCCCCCEEEe-cccccC----CccCeEEEEEcHHHHhcccCC----------CC-----------------C-CC
Confidence 11234688876 488853 221256777888776655210 00 0 01
Q ss_pred ccchh-HHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEcC---C-CCcceEEEecCC--HHHHHHHH
Q 001586 420 ICTAQ-ALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQG---L-PFFDTVKVKCAD--AHAIASAA 492 (1049)
Q Consensus 420 i~t~~-~l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~g~~~v~~---~-~~~~~v~i~~~~--~~~v~~~L 492 (1049)
+|.+. ...+..+++ ..+..+ ++.++..++.+++.+.|++++ ..... . ..+-.+.+..+. ..++.+.|
T Consensus 287 ~~~~~~~~aa~~a~L--~~l~~~---~~~~~~~~~~~~l~~~L~~~~-~~~~~~~~g~g~~~~i~~~~~~~~~~~~~~~L 360 (401)
T PRK00854 287 FGGNPLACAVARAAL--KVLTEE---GMIENAAEMGAYFLEGLRSIR-SNIVREVRGRGLMLAVELEPEAGGARQYCEAL 360 (401)
T ss_pred CCcCHHHHHHHHHHH--HHHHHc---CHHHHHHHHHHHHHHHHHhhc-cCceEEEeccceEEEEEEecCchhHHHHHHHH
Confidence 12111 222223332 333222 245677778899999998875 32221 1 111122232222 57899999
Q ss_pred HHcCCeeeeecCCeEEEEeccCCCHHHHHHHHHHHh
Q 001586 493 YKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFA 528 (1049)
Q Consensus 493 ~~~gI~~~~~~~~~vris~~~~~t~edid~lv~aL~ 528 (1049)
.++||.+.....+.+|++++..+|++|||+++++|.
T Consensus 361 ~~~GV~v~~~~~~~lR~~p~~~~t~e~i~~~i~~l~ 396 (401)
T PRK00854 361 KERGLLAKDTHDHTIRLAPPLVITREQVDWALEQIA 396 (401)
T ss_pred HHCCeEEecCCCCEEEEeCCcccCHHHHHHHHHHHH
Confidence 999999876546799999999999999999999986
No 477
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.44 E-value=4.5e-11 Score=141.39 Aligned_cols=293 Identities=16% Similarity=0.209 Sum_probs=176.4
Q ss_pred HHHHHHHHHhhCCCc--cccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcC--------C--
Q 001586 635 NNLGEWLCTITGFDS--FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCG--------M-- 702 (1049)
Q Consensus 635 ~el~~~la~l~G~~~--~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G--------~-- 702 (1049)
.++.++++++++.+. ..++.+||+++++.++..+|.|. | +++.|.+..+.||....+....+ .
T Consensus 87 ~~la~~l~~~~~~~~~~~~~f~~sGsea~e~Alklar~~~---~--r~~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~~ 161 (425)
T PRK08088 87 LELCEKMNQKVPGDFAKKTLLVTTGSEAVENAVKIARAAT---K--RSGVIAFTGAYHGRTHYTLALTGKVNPYSAGMGL 161 (425)
T ss_pred HHHHHHHHHhCCCCCCCEEEEeCCcHHHHHHHHHHHHHHh---C--CCeEEEECCccCCccHHHHHhhCCCCccccCCCC
Confidence 378888999887532 34778999999999999888762 1 23345578889998766533211 1
Q ss_pred ---EEEE--EcCCCCCCCC----HHHHHHHHH--hcCCCeEEEEEEcC-Ccccccc---ccHHHHHHHHHHcCCEEEEec
Q 001586 703 ---KIVS--VGTDAKGNIN----IEELRKAAE--ANRDNLSTLMVTYP-STHGVYE---EGIDEICKIIHDNGGQVYMDG 767 (1049)
Q Consensus 703 ---~Vv~--V~~d~~g~iD----~~~L~~~i~--~~~~~taaV~it~P-n~~G~i~---~di~eI~~lah~~G~ll~vD~ 767 (1049)
.+.. +|.+.++ .+ +++|+++++ .+.+++++|+++.. +..|.+. ..+++|.++|+++|+++++|.
T Consensus 162 ~~~~~~~~~~p~~~~~-~~~~~~~~~l~~~l~~~~~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~De 240 (425)
T PRK08088 162 MPGHVYRALYPCPLHG-VSEDDAIASIERIFKNDAAPEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLIADE 240 (425)
T ss_pred CCCCcEEcCCCccccC-ccHHHHHHHHHHHHHhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEec
Confidence 1122 2322222 22 567888886 23467888877654 2345543 249999999999999999999
Q ss_pred cccccccCcCCCCc------cC--CcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCC
Q 001586 768 ANMNAQVGLTSPGY------IG--ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPL 839 (1049)
Q Consensus 768 A~~~a~~gl~~Pg~------~G--aDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t 839 (1049)
++. ++.++|. .+ +|+.++ .|.++ +|-.+|++++++++.+.+.... + .
T Consensus 241 v~~----g~g~~g~~~~~~~~~~~pdi~s~--sK~l~-----~G~rig~v~~~~~~~~~~~~~~---------~-----~ 295 (425)
T PRK08088 241 VQT----GAGRTGTLFAMEQMGVAADLTTF--AKSIA-----GGFPLAGVTGRAEVMDAIAPGG---------L-----G 295 (425)
T ss_pred ccc----CCCcCcchhHHhhcCCCCCEEEE--ecccc-----CCCcceeeEecHHHHhhcCCCC---------C-----C
Confidence 754 3333321 22 465544 68874 4566899999887776543110 0 0
Q ss_pred CCCCccchhhHHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc---CCee--eccCCCceeeEEEEeccC-cc
Q 001586 840 GTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRG-LK 913 (1049)
Q Consensus 840 ~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~---~~v~--~~g~~g~~~~e~iv~~~~-~~ 913 (1049)
...+ ++++.+.++.++|..+..+.+.+ +.....+++.+.|+++ +... ..|. |.. +.+.+.. ..
T Consensus 296 ~t~~----~~~~~~~a~~~~l~~~~~~~~~~---~~~~~~~~~~~~l~~l~~~~~~~~~v~g~-G~~---~~l~l~~~~~ 364 (425)
T PRK08088 296 GTYA----GNPIACAAALAVLKVFEQENLLQ---KANALGEKLKDGLLAIAEKHPEIGDVRGL-GAM---IAIELFEDGD 364 (425)
T ss_pred CCCC----cCHHHHHHHHHHHHHHHhcCHHH---HHHHHHHHHHHHHHHHHHhCCCeEEEecc-ceE---EEEEEecCCC
Confidence 1111 23444555666776665444433 3334455666666543 3221 1222 322 3333310 00
Q ss_pred --ccCCCCHHHHHHHHHHCCcccCC-CCCCCCCEEEEEccCCCCHHHHHHHHHHHHHHHHH
Q 001586 914 --NTAGIEPEDVAKRLMDYGFHGPT-MSWPVPGTLMIEPTESESKEELDRYCDALISIREE 971 (1049)
Q Consensus 914 --~~~g~~~~~v~k~L~~~Gi~~~~-~~~p~~~~lri~~t~~~t~eeid~fv~aL~~i~~~ 971 (1049)
.........+.+++.++|+.+.. ..+ ++.+|++|+...+++||++.++.|.+++..
T Consensus 365 ~~~p~~~~~~~l~~~~~~~Gv~~~~~~~~--~~~iRl~~~~~~t~~ei~~~i~~l~~~l~~ 423 (425)
T PRK08088 365 HSKPNAKLTAQIVARARDKGLILLSCGPY--YNVLRILVPLTIEDAQIRQGLEIIAQCFDE 423 (425)
T ss_pred CCCCCHHHHHHHHHHHHhCCCEEecCCCC--CCEEEEECCCCcCHHHHHHHHHHHHHHHHh
Confidence 00112256788889999977532 222 488999999999999999999999988764
No 478
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=99.44 E-value=2.5e-11 Score=138.80 Aligned_cols=270 Identities=16% Similarity=0.137 Sum_probs=165.7
Q ss_pred HHHHHHHHHhhCCCccccccCchHH-HHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCEEEEEcCCCCC
Q 001586 635 NNLGEWLCTITGFDSFSLQPNAGAA-GEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKG 713 (1049)
Q Consensus 635 ~el~~~la~l~G~~~~~l~~~sGa~-ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~Vv~V~~d~~g 713 (1049)
.++++.+++.+|.+. +..++|++ +. .++++. .++++|+++...+..+...+++.|++++.++.+
T Consensus 52 ~~Lr~~ia~~~~~~~--I~it~Gs~~al---~~~~~~-------~~gd~v~v~~P~y~~~~~~~~~~g~~~~~v~~~--- 116 (330)
T PRK05664 52 DGLEAAARAYYGAPQ--LLPVAGSQAAI---QALPRL-------RAPGRVGVLSPCYAEHAHAWRRAGHQVRELDEA--- 116 (330)
T ss_pred HHHHHHHHHHhCCCC--EEECcCHHHHH---HHHHHc-------cCCCEEEEcCCChHHHHHHHHHcCCeEEEechh---
Confidence 367888999998764 44455554 33 122221 256789998876555556688999999998863
Q ss_pred CCCHHHHHHHHHhcCCCeEEEEEEcCC-cccccc--ccHHHHHHHHHHcCCEEEEeccccccccCcCCCCcc-CCc--EE
Q 001586 714 NINIEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI-GAD--VC 787 (1049)
Q Consensus 714 ~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~--~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~Pg~~-GaD--i~ 787 (1049)
+++++++ +++++++++|| .+|.+- .++++|+++|+++|+++++|.++... ....+...+ ..| ++
T Consensus 117 -----~~~~~~~----~~~~v~l~nP~NPTG~~~s~~~l~~l~~~~~~~~~~iI~DE~y~~~-~~~~s~~~~~~~~~vi~ 186 (330)
T PRK05664 117 -----EVEAALD----SLDVLVVVNPNNPTGRRFDPARLLAWHARLAARGGWLVVDEAFMDN-TPQHSLAACAHRPGLIV 186 (330)
T ss_pred -----hHhhhhc----CCCEEEEeCCcCCCCCccCHHHHHHHHHHHHhcCCEEEEECCcccC-CCcccccccccCCCEEE
Confidence 4556553 56678889995 589775 24777888889999999999986321 110111111 112 56
Q ss_pred EeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhh
Q 001586 788 HLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (1049)
Q Consensus 788 ~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eG 867 (1049)
+.++.|+|++| |-++|++++.+++...+-.. ....++++ ....++.+++.. .+-
T Consensus 187 ~~SfSK~~gl~----GlRiG~~v~~~~l~~~~~~~--------------~~~~~~~~------~~~~~~~~~L~~--~~~ 240 (330)
T PRK05664 187 LRSFGKFFGLA----GARLGFVLAEPALLRALAEL--------------LGPWTVSG------PTRWLAQAALAD--TPW 240 (330)
T ss_pred EeeccccccCC----CcceEEEEeCHHHHHHHHHh--------------cCCCCCCH------HHHHHHHHHHhC--hHH
Confidence 66778877544 78899999987766543210 00011221 111112222221 122
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEE
Q 001586 868 LTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMI 947 (1049)
Q Consensus 868 l~~~~~~~~~~a~yL~~~L~~~~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~p~~~~lri 947 (1049)
.++..+....+.+++.+.|+++ .+... +....-+.+..+ +..++.+.|.++||.+.. |...+++||
T Consensus 241 ~~~~~~~~~~~r~~l~~~L~~~-~~~~~---~~~~~f~~~~~~--------~~~~~~~~l~~~gi~v~~--f~~~~~iRi 306 (330)
T PRK05664 241 QRRQRERLLAASQRLAALLRRH-GLTPA---GGCALFQWVRTE--------DAAALHEFLARRGILTRL--FEQPASLRF 306 (330)
T ss_pred HHHHHHHHHHHHHHHHHHHHHC-CCccc---CCcceEEEEecC--------CHHHHHHHHHHCCeEEEE--CCCCCeEEE
Confidence 3334455556778888988875 22111 111111233321 467899999999999863 333589999
Q ss_pred EccCCCCHHHHHHHHHHHHHHHHH
Q 001586 948 EPTESESKEELDRYCDALISIREE 971 (1049)
Q Consensus 948 ~~t~~~t~eeid~fv~aL~~i~~~ 971 (1049)
++.. +.+++++|+++|+++.++
T Consensus 307 s~~~--~~~~~~~l~~al~~~~~~ 328 (330)
T PRK05664 307 GLPA--DEADWARLDQALLAYRKE 328 (330)
T ss_pred ECCC--CHHHHHHHHHHHHHHHhh
Confidence 9864 578899999999988766
No 479
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=99.43 E-value=1.9e-11 Score=139.89 Aligned_cols=276 Identities=14% Similarity=0.133 Sum_probs=168.3
Q ss_pred HHHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCEEEEEcCCCCCC
Q 001586 635 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGN 714 (1049)
Q Consensus 635 ~el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~Vv~V~~d~~g~ 714 (1049)
.++++.+++.+|.+...+..++|++.- ..++++ +. .+++ |+++..........+++.|++++.+|++.. .
T Consensus 43 ~~lr~~ia~~~~~~~~~I~it~Gs~~~--l~~~~~-~~-----~~~~-vv~~~P~y~~y~~~~~~~G~~v~~vp~~~~-~ 112 (332)
T PRK06425 43 TDIEDQIKIYTQGLKIKVLIGPGLTHF--IYRLLS-YI-----NVGN-IIIVEPNFNEYKGYAFTHGIRISALPFNLI-N 112 (332)
T ss_pred HHHHHHHHHHhCCCcceEEECCCHHHH--HHHHHH-Hh-----CCCc-EEEeCCChHHHHHHHHHcCCeEEEEeCCcc-c
Confidence 478899999999988766666666522 222333 21 1333 666665444455558899999999998653 3
Q ss_pred CCHHHHHHHHHhcCCCeEEEEEEcCC-cccccc--ccHHHHHHHHHHcCCEEEEecccccccc-CcCCC----CccCCcE
Q 001586 715 INIEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQV-GLTSP----GYIGADV 786 (1049)
Q Consensus 715 iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~--~di~eI~~lah~~G~ll~vD~A~~~a~~-gl~~P----g~~GaDi 786 (1049)
.|.+.+++ .++++|++++|| .+|.+- +.+++|.++|+++|+++++|.++..-.. +..+. ....--|
T Consensus 113 ~~~~~l~~------~~~k~v~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~DE~Y~~~~~~~~~~~~~~~~~~~~vi 186 (332)
T PRK06425 113 NNPEILNN------YNFDLIFIVSPDNPLGNLISRDSLLTISEICRKKGALLFIDEAFIDFVPNRAEEDVLLNRSYGNVI 186 (332)
T ss_pred CcHHHHhh------cCCCEEEEeCCCCCcCCccCHHHHHHHHHHHHHcCCEEEEecchhccccccchhHHHHhccCCCEE
Confidence 46554431 477889999995 599764 2478888889999999999998531111 10000 1111125
Q ss_pred EEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchh
Q 001586 787 CHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSK 866 (1049)
Q Consensus 787 ~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~e 866 (1049)
++.|+.|+|++| |.++|++++.+++.+.+... .....++. . +..++.....+
T Consensus 187 ~~~SfSK~~~l~----GlRiGy~v~~~~li~~l~~~--------------~~~~~~~~------~----~~~~l~~~~~~ 238 (332)
T PRK06425 187 IGRSLTKILGIP----SLRIGYIATDDYNMKISRKI--------------TEPWSVCD------P----AIDFIRSIDLD 238 (332)
T ss_pred EEeecHHhcCCc----hhhheeeecCHHHHHHHHHc--------------CCCCccCH------H----HHHHHHHhhhH
Confidence 566778887654 78899999987766543210 00011111 1 11122222222
Q ss_pred hH-HHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHHHCCcccCC-CCCC-C-
Q 001586 867 GL-TEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPT-MSWP-V- 941 (1049)
Q Consensus 867 Gl-~~~~~~~~~~a~yL~~~L~~~-~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~-~~~p-~- 941 (1049)
.+ ++..+...++.+++.+.|+++ +.+ +..+.+.+ +.+.++ +..+++++|.++||.+.. ..|+ .
T Consensus 239 ~~~~~~~~~~~~~r~~l~~~L~~~g~~~-~~~~~g~f---~~~~~~--------~~~~~~~~l~~~gi~v~~~~~f~~~~ 306 (332)
T PRK06425 239 YVAKHSLDIMENERSYLINNLEAMGFRA-AGDPSANF---ITFMIP--------DAHDFYSYLLKNGILVRLLDDYECLG 306 (332)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCEE-CCCCCceE---EEEEcC--------CHHHHHHHHHHCCeEEEECCCCCCCC
Confidence 22 234455556778888888875 332 11122222 344442 467899999999998643 3342 2
Q ss_pred CCEEEEEccCCCCHHHHHHHHHHHHHHH
Q 001586 942 PGTLMIEPTESESKEELDRYCDALISIR 969 (1049)
Q Consensus 942 ~~~lri~~t~~~t~eeid~fv~aL~~i~ 969 (1049)
.+++||++. +.++.++|+++|++++
T Consensus 307 ~~~iRis~~---~~~~~~~l~~al~~~~ 331 (332)
T PRK06425 307 EQYIRIAIR---RRSFNIKLVNALRNFL 331 (332)
T ss_pred CCEEEEEeC---CHHHHHHHHHHHHHHh
Confidence 479999984 6889999999998764
No 480
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=99.43 E-value=1.6e-11 Score=141.76 Aligned_cols=280 Identities=18% Similarity=0.255 Sum_probs=177.3
Q ss_pred ccccCCChhhHhhhHHHHHHHHHHHHHHHhC------CCCc-ceEeccchHHHHHHHHHHhhhccCCCCEEEEcCCCCHH
Q 001586 195 YTQYTPYQAEIAQGRLESLLNFQTMIADLTG------LPMS-NASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQ 267 (1049)
Q Consensus 195 ~t~ytpyq~e~sqg~le~l~e~q~~ia~L~G------~~~~-n~sl~~~~Ta~~eA~~~a~~~~~~~g~~Vlv~~~~Hps 267 (1049)
...|.|++. ..++++.+|++++ .+.. ++.+..|++++...+...+.. +++++|++++-.|+.
T Consensus 37 ~~~Y~~~~g---------~~~lr~~ia~~~~~~~~~~~~~~~~i~~~~G~~~~~~~~~~~~~~--~~~~~vlv~~P~y~~ 105 (363)
T PF00155_consen 37 FLGYPPPQG---------YPELREAIADFLGRRYGVPVDPEANILVTSGAQAALFLLLRLLKI--NPGDTVLVPDPCYPS 105 (363)
T ss_dssp CTSSTCTTH---------HHHHHHHHHHHHHHHHTHHTTGGEGEEEESHHHHHHHHHHHHHHS--STTSEEEEEESSSTH
T ss_pred cccCCCchh---------hHHHHHHHHHHhhhccCcccccceEEEEecccccchhhhhhcccc--cccccceecCCcccc
Confidence 456666651 2345678888888 6666 777777777666555544422 278999999999999
Q ss_pred HHHHHHHhhcCCCeEEEEeC----------cchhhc-cCC------CEeEEEEEcC-CCCeeecc---HHHHHHHHHhCC
Q 001586 268 TIDICITRADGFDIKVVVSD----------LKDIDY-KSG------DVCGVLVQYP-GTEGEVLD---YGDFIKNAHANG 326 (1049)
Q Consensus 268 ~~~~l~~~a~~~gi~v~~v~----------~~~l~~-l~~------~t~~V~v~~p-n~~G~i~d---i~~I~~~ah~~g 326 (1049)
+...++. .|++++.++ +++|++ +++ ++++|++.+| |++|.+.+ +++|+++|+++|
T Consensus 106 ~~~~~~~----~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~p~nPtG~~~~~~~l~~l~~~~~~~~ 181 (363)
T PF00155_consen 106 YIEAARL----LGAEVIPVPLDSENDFHLDPEALEEALDELPSKGPRPKAVLICNPNNPTGSVLSLEELRELAELAREYN 181 (363)
T ss_dssp HHHHHHH----TTSEEEEEEEEETTTTEETHHHHHHHHHTSHTTTETEEEEEEESSBTTTTBB--HHHHHHHHHHHHHTT
T ss_pred ccccccc----cCceeeeccccccccccccccccccccccccccccccceeeecccccccccccccccccchhhhhcccc
Confidence 9988764 466666665 344544 433 5788889998 78998864 566666699999
Q ss_pred cEEEEEeccccccCCCCCC--------cccce-EEEecC-ccccccCCCCCCceEEEEEchhHHhcCCCceeeeeecCCC
Q 001586 327 VKVVMATDLLALTILKPPG--------ELGAD-IVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSG 396 (1049)
Q Consensus 327 alliV~a~~~alg~l~~p~--------~~GaD-ivvgs~-k~lg~P~~~GGP~~G~l~~~~~l~~~lpgrivG~s~d~~g 396 (1049)
++++++. ..+......++ +.+.+ |++.|. |.||.| |--.|++++.+++.+.+.
T Consensus 182 ~~ii~De-~y~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~----GlRvG~i~~~~~~~~~l~------------ 244 (363)
T PF00155_consen 182 IIIIVDE-AYSDLIFGDPDFGPIRSLLDEDDNVIVVGSLSKSFGLP----GLRVGYIVAPPELIERLR------------ 244 (363)
T ss_dssp SEEEEEE-TTTTGBSSSSHTHHHHGHHTTTSTEEEEEESTTTTTSG----GGTEEEEEEEHHHHHHHH------------
T ss_pred cceeeee-ceeccccCCCccCcccccccccccceeeeecccccccc----ccccccccchhhhhhhhh------------
Confidence 9999953 33222222110 11233 677776 878654 123689988887766541
Q ss_pred CcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHh-CcchHHHHHHHHHHHHHHHHHHhhcCCCeEEcCCCCc
Q 001586 397 KPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYH-GPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFF 475 (1049)
Q Consensus 397 ~~~~~l~lqtreq~irrekaTsni~t~~~l~a~~aa~y~~~~-g~~Gl~~ia~~~~~~a~~l~~~L~~~g~~~v~~~~~~ 475 (1049)
+-. ++..++ ......+++++.... ..+=++++.++..++.+++.+.|++.| +.+..++ .
T Consensus 245 ----------------~~~-~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~-~~~~~~~-~ 304 (363)
T PF00155_consen 245 ----------------RFQ-RSGLSS-SPMQAAAAAALSDPELVEKWLEELRERLRENRDLLREALEEIG-ITVLPPE-A 304 (363)
T ss_dssp ----------------HHH-HHTTSS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-SEEEHHS-B
T ss_pred ----------------hcc-cccccc-chhhHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHhh-hheeecc-C
Confidence 000 011111 222222232211110 011456788888899999999998886 8876432 1
Q ss_pred ceEEE-ecCC--HHHHHHHHHHc-CCeeeee----cCCeEEEEeccCCCHHHHHHHHHHH
Q 001586 476 DTVKV-KCAD--AHAIASAAYKI-EMNLRVV----DSNTVTASFDETTTLEDVDKLFIVF 527 (1049)
Q Consensus 476 ~~v~i-~~~~--~~~v~~~L~~~-gI~~~~~----~~~~vris~~~~~t~edid~lv~aL 527 (1049)
..+.+ ..+. ..++.+.|.++ ||.+... .++.+|+++ ...+++++++++++|
T Consensus 305 ~~~~~~~~~~~~~~~l~~~L~~~~gi~v~pg~~~~~~~~iRi~~-a~~~~e~~~~~~~~l 363 (363)
T PF00155_consen 305 GFFLWVRLDPNDAEELAQELLEEYGILVRPGSYFGVPGYIRISL-ASHSEEDLEEALERL 363 (363)
T ss_dssp SSEEEEEESHHHHHHHHHHHHHHHTEEEEEGGGGTSTTEEEEEG-GCSCHHHHHHHHHHH
T ss_pred ccEEEEEcccchHHHHHHHHHHhCCEEEEecCCCCCCCEEEEEe-ccCCHHHHHHHHhhC
Confidence 11222 2332 57899999987 9987542 267899999 889999999999875
No 481
>PRK07908 hypothetical protein; Provisional
Probab=99.43 E-value=6.6e-11 Score=136.34 Aligned_cols=297 Identities=14% Similarity=0.115 Sum_probs=182.4
Q ss_pred CCCCCCCCCcHHHHHHHHhCCccccccCCChhhHhhhHHHHHHHHHHHHHHHhCCCCcceEeccchHHHHHHHHHHhhhc
Q 001586 172 GMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQ 251 (1049)
Q Consensus 172 G~g~y~~~~p~~i~~~~~~~~~~~t~ytpyq~e~sqg~le~l~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a~~~~ 251 (1049)
..+.-+...|+.+.+.+.+...-+..|.+. +| ..++++.+|+.+|.++.++.++.|++.++..+.. ..
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~-----~g----~~~lr~aia~~~~~~~~~I~it~Ga~~al~~~~~---l~ 95 (349)
T PRK07908 28 AVNVRHDTPPEWLRERLAARLGDLAAYPST-----ED----ERRARAAVAARHGRTPDEVLLLAGAAEGFALLAR---LR 95 (349)
T ss_pred cCCCCCCCCCHHHHHHHHHHhhHhhcCCCc-----cc----hHHHHHHHHHHhCcChhhEEECCCHHHHHHHHHh---cC
Confidence 344444456776655555432223445432 22 3456789999999999999999999966554333 22
Q ss_pred cCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCcch-----hhccCCCEeEEEEEcC-CCCeeeccHHHHHHHHHhC
Q 001586 252 KGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKD-----IDYKSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHAN 325 (1049)
Q Consensus 252 ~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~~~~-----l~~l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~ 325 (1049)
+ +++++.. |++...+.. ++..|++++.++.++ ++.+.++++++++.+| |++|.+.+.++|.++|+.
T Consensus 96 --~-~~viv~~---P~y~~~~~~-~~~~G~~i~~v~~~~~~~~d~~~l~~~~~~i~l~np~NPTG~~~~~~~l~~l~~~- 167 (349)
T PRK07908 96 --P-RRAAVVH---PSFTEPEAA-LRAAGIPVHRVVLDPPFRLDPAAVPDDADLVVIGNPTNPTSVLHPAEQLLALRRP- 167 (349)
T ss_pred --C-CeEEEeC---CCChHHHHH-HHHcCCEEEeeccCcccCcChhHhccCCCEEEEcCCCCCCCCCcCHHHHHHHHhc-
Confidence 4 4566664 444444332 355799998887642 1225567889999888 799999999999999975
Q ss_pred CcEEEEEecccc---ccCCCCCC--cccceEEEecC-ccccccCCCCCCceEEEEEchhHHhcCCCceeeeeecCCCCcc
Q 001586 326 GVKVVMATDLLA---LTILKPPG--ELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPA 399 (1049)
Q Consensus 326 galliV~a~~~a---lg~l~~p~--~~GaDivvgs~-k~lg~P~~~GGP~~G~l~~~~~l~~~lpgrivG~s~d~~g~~~ 399 (1049)
+.+++++ +..+ .+...+.. +.+--++++|. |.|+.| |.-.||+++++++++.+....
T Consensus 168 ~~~iIvD-e~y~~~~~~~~~~l~~~~~~~~i~i~S~SK~~~l~----GlRiG~~~~~~~~~~~~~~~~------------ 230 (349)
T PRK07908 168 GRILVVD-EAFADAVPGEPESLAGDDLPGVLVLRSLTKTWSLA----GLRVGYALGAPDVLARLTRGR------------ 230 (349)
T ss_pred CCEEEEE-CcchhhccCCccccccccCCCEEEEeecccccCCc----cceeeeeecCHHHHHHHHhcC------------
Confidence 7888883 3221 11111111 12223556665 877543 445799999888776552100
Q ss_pred eeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEcCCCCcceEE
Q 001586 400 LRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVK 479 (1049)
Q Consensus 400 ~~l~lqtreq~irrekaTsni~t~~~l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~g~~~v~~~~~~~~v~ 479 (1049)
...++++.+ ..+. ++ ++.-...+-++++.++..++.+++.+.|+++| +++..++...-+.
T Consensus 231 ----------------~~~~~~~~~-~~a~-~~-~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~-~~~~~p~~g~~~~ 290 (349)
T PRK07908 231 ----------------AHWPVGTLQ-LEAI-AA-CCAPRAVAEAAADAARLAADRAEMVAGLRAVG-ARVVDPAAAPFVL 290 (349)
T ss_pred ----------------CCCCccHHH-HHHH-HH-HhcccchHHHHHHHHHHHHHHHHHHHHHHhCC-cEeccCCCceEEE
Confidence 001222211 1111 11 11101112356677788888889999998886 8776432222244
Q ss_pred EecCCHHHHHHHHHHcCCeeeee------cCCeEEEEeccCCCHHHHHHHHHHHh
Q 001586 480 VKCADAHAIASAAYKIEMNLRVV------DSNTVTASFDETTTLEDVDKLFIVFA 528 (1049)
Q Consensus 480 i~~~~~~~v~~~L~~~gI~~~~~------~~~~vris~~~~~t~edid~lv~aL~ 528 (1049)
+.+++..++.+.|.++||.+... .++.+|+|+. +.+|+++|+++|+
T Consensus 291 ~~~~~~~~~~~~l~~~gI~v~~g~~f~~~~~~~vRis~~---~~~~~~~l~~al~ 342 (349)
T PRK07908 291 VRVPDAELLRKRLRERGIAVRRGDTFPGLDPDYLRLAVR---PRAEVPVLVQALA 342 (349)
T ss_pred EECCcHHHHHHHHHhCCEEEEECCCCCCCCCCeEEEEeC---CCccHHHHHHHHH
Confidence 45555678888898999987542 2478999994 7889999999996
No 482
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.42 E-value=1.2e-11 Score=143.40 Aligned_cols=281 Identities=17% Similarity=0.165 Sum_probs=178.6
Q ss_pred HHHHHHHHHHHHhCCCCcceEeccchHHHHHHHHHHhhhccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCcc--
Q 001586 212 SLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK-- 289 (1049)
Q Consensus 212 ~l~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a~~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~~~-- 289 (1049)
.+.+|++.+++++|.+ ++..+.+||+|.++++.++... +|++|++|...++++..++.. .|.+++++|++
T Consensus 26 ~~~~fE~~~a~~~g~~--~~~~~~sgt~Al~~al~~l~~~--~gdeVi~p~~t~~~~~~ai~~----~G~~pv~~Di~~~ 97 (363)
T PF01041_consen 26 YVEEFEKEFAEYFGVK--YAVAVSSGTSALHLALRALGLG--PGDEVIVPAYTFPATASAILW----AGAEPVFVDIDPE 97 (363)
T ss_dssp HHHHHHHHHHHHHTSS--EEEEESSHHHHHHHHHHHTTGG--TTSEEEEESSS-THHHHHHHH----TT-EEEEE-BETT
T ss_pred HHHHHHHHHHHHhCCC--eEEEeCChhHHHHHHHHhcCCC--cCceEecCCCcchHHHHHHHH----hccEEEEEeccCC
Confidence 3556889999999955 4889999999999999887766 899999999999999998754 59999998874
Q ss_pred -------hhhc-cCCCEeEEEEEcCCCCeeeccHHHHHHHHHhCCcEEEEEeccccccCC---CCCCcccceEEEecC--
Q 001586 290 -------DIDY-KSGDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTIL---KPPGELGADIVVGSA-- 356 (1049)
Q Consensus 290 -------~l~~-l~~~t~~V~v~~pn~~G~i~di~~I~~~ah~~galliV~a~~~alg~l---~~p~~~GaDivvgs~-- 356 (1049)
++++ ++++|++|++++ ++|...|+++|.++|+++|+.++-++ ..++|.. +..|.+| |+.++|.
T Consensus 98 ~~~id~~~~~~~i~~~t~ai~~~h--~~G~~~d~~~i~~~~~~~~i~lIeD~-a~a~g~~~~g~~~G~~g-d~~~fSf~~ 173 (363)
T PF01041_consen 98 TLNIDPEALEKAITPKTKAILVVH--LFGNPADMDAIRAIARKHGIPLIEDA-AQAFGARYKGRPVGSFG-DIAIFSFHP 173 (363)
T ss_dssp TSSB-HHHHHHHHHTTEEEEEEE---GGGB---HHHHHHHHHHTT-EEEEE--TTTTT-EETTEETTSSS-SEEEEESST
T ss_pred cCCcCHHHHHHHhccCccEEEEec--CCCCcccHHHHHHHHHHcCCcEEEcc-ccccCceeCCEeccCCC-CceEecCCC
Confidence 3455 788999999987 89999999999999999999999943 3455532 2456777 9999996
Q ss_pred -ccccccCCCCCCceEEEEEch-hHHhcCC-CceeeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHH
Q 001586 357 -QRFGVPMGYGGPHAAFLATSQ-EYKRMMP-GRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAM 433 (1049)
Q Consensus 357 -k~lg~P~~~GGP~~G~l~~~~-~l~~~lp-grivG~s~d~~g~~~~~l~lqtreq~irrekaTsni~t~~~l~a~~aa~ 433 (1049)
|.+ +. | .+|++.+++ ++.+++. -|-.|...+ .. ++......+..+.-+.-+.|++
T Consensus 174 ~K~i--~~--g--eGG~v~~~~~~~~~~~~~~~~~g~~~~--~~--------------~~~~~~~~~g~n~rm~~~~AAi 231 (363)
T PF01041_consen 174 TKII--TT--G--EGGAVVTNDPELAERARALRNHGRSRD--AF--------------RRYRHELPPGYNFRMSELQAAI 231 (363)
T ss_dssp TSSS---S--S--S-EEEEESTHHHHHHHHHHTBTTEETS--EC--------------STTEESSSS--B-B-BHHHHHH
T ss_pred CCCC--cC--C--CCeeEEecHHHHHHHhhhhhccCcCcc--cc--------------ccccccccCCcccccHHHHHHH
Confidence 444 22 2 346888875 3333331 011121100 00 0000000011111122223333
Q ss_pred HHHHhCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEcCC---C---CcceEEEecCC-----HHHHHHHHHHcCCeeeee
Q 001586 434 YAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL---P---FFDTVKVKCAD-----AHAIASAAYKIEMNLRVV 502 (1049)
Q Consensus 434 y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~g~~~v~~~---~---~~~~v~i~~~~-----~~~v~~~L~~~gI~~~~~ 502 (1049)
-+..+ +-++++.++-.+++.++.+.|.++.++..... . ...-+.+.++. ..++.+.|.++||..+..
T Consensus 232 gl~QL--~~L~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~rd~l~~~L~~~GI~~~~~ 309 (363)
T PF01041_consen 232 GLAQL--KRLDEIIARRRENAQRYREALAGIPGIKPPPIPDGAERSSYYRFPIRLPDEALADRDELVEALRARGIETRPH 309 (363)
T ss_dssp HHHHH--HTHHHHHHHHHHHHHHHHHHHTTGTTEEEEGCGTTTEEBCESSEEEEETCCGCSTHHHHHHHHHHTTBEEBCS
T ss_pred HHHHH--HHhhhhHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccccccccccchHHHHHHHHHHCCCccccc
Confidence 22222 23566667778899999999999865755421 1 12235555442 578999999999964210
Q ss_pred ----------------------------cCCeEEEEeccCCCHHHHHHHHHHHh
Q 001586 503 ----------------------------DSNTVTASFDETTTLEDVDKLFIVFA 528 (1049)
Q Consensus 503 ----------------------------~~~~vris~~~~~t~edid~lv~aL~ 528 (1049)
....+.+-+++.-|.+|+++++++|+
T Consensus 310 ~~~pl~~~~~~~~~~~~~~~~~P~ae~l~~r~l~LP~~~~lt~edv~~I~~~ir 363 (363)
T PF01041_consen 310 YPKPLHRQPVYRSYPYYAPGDLPNAERLSQRLLSLPIHPRLTEEDVDYIAEAIR 363 (363)
T ss_dssp TSSCGGGSGGGTTGEEEETSSSHHHHHHHHHEEEEEHSTTSCHHHHHHHHHHHH
T ss_pred ccCchhhhHHHHhcCccccCCCHHHHHHHhCeEECcCCCCCCHHHHHHHhhccC
Confidence 02457888888999999999999874
No 483
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.41 E-value=3.7e-11 Score=137.44 Aligned_cols=262 Identities=16% Similarity=0.164 Sum_probs=172.5
Q ss_pred HHHHHHHHHHhCCCCcceEeccchHHHHHHHHHHhhhccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeC-cchhh
Q 001586 214 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSD-LKDID 292 (1049)
Q Consensus 214 ~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a~~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~-~~~l~ 292 (1049)
.++|+.+|+++|.++.++.++.|++++..++..++ . +| +|++++-.|+.+...++ ..|++++.++ +++++
T Consensus 50 ~~lr~~la~~~~~~~~~i~~t~G~~~~i~~~~~~l--~--~g-~vl~~~p~y~~~~~~~~----~~g~~~~~~~d~~~l~ 120 (330)
T TIGR01140 50 DELRAAAAAYYGLPAASVLPVNGAQEAIYLLPRLL--A--PG-RVLVLAPTYSEYARAWR----AAGHEVVELPDLDRLP 120 (330)
T ss_pred HHHHHHHHHHhCCChhhEEECCCHHHHHHHHHHHh--C--CC-eEEEeCCCcHHHHHHHH----HcCCEEEEeCCHHHHH
Confidence 45778999999998889999999988777654332 2 55 69999888988877764 4688888885 45565
Q ss_pred c-cCCCEeEEEEEcC-CCCeeecc---HHHHHHHHHhCCcEEEEEeccccccCCCCC----CcccceEEEecC-cccccc
Q 001586 293 Y-KSGDVCGVLVQYP-GTEGEVLD---YGDFIKNAHANGVKVVMATDLLALTILKPP----GELGADIVVGSA-QRFGVP 362 (1049)
Q Consensus 293 ~-l~~~t~~V~v~~p-n~~G~i~d---i~~I~~~ah~~galliV~a~~~alg~l~~p----~~~GaDivvgs~-k~lg~P 362 (1049)
+ + .++++|++++| |++|.+.| +++|+++|+++|++++++.-...+..-.+. ...+-+|+++|. |.||.|
T Consensus 121 ~~~-~~~~~v~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~ 199 (330)
T TIGR01140 121 AAL-EELDVLVLCNPNNPTGRLIPPETLLALAARLRARGGWLVVDEAFIDFTPDASLAPQAARFPGLVVLRSLTKFFGLA 199 (330)
T ss_pred hhc-ccCCEEEEeCCCCCCCCCCCHHHHHHHHHHhHhcCCEEEEECcccccCCccchhhHhccCCCEEEEEecchhhcCc
Confidence 5 5 46788889998 79999988 677888899999999994311111111111 123567889887 877643
Q ss_pred CCCCCCceEEEEEchhHHhcCCCceeeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcch
Q 001586 363 MGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEG 442 (1049)
Q Consensus 363 ~~~GGP~~G~l~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irrekaTsni~t~~~l~a~~aa~y~~~~g~~G 442 (1049)
| =.+|++++++++.+.+... ..+.+++ .. +..++. .++...+
T Consensus 200 -G---~R~G~i~~~~~~~~~l~~~----------------------------~~~~~~s--~~--~q~~~~--~~l~~~~ 241 (330)
T TIGR01140 200 -G---LRLGFVVAHPALLARLREA----------------------------LGPWTVN--GP--ARAAGR--AALADTA 241 (330)
T ss_pred -h---hhhhheeCCHHHHHHHHhc----------------------------CCCCCch--HH--HHHHHH--HHHhchH
Confidence 1 1248899888877655210 0011111 11 111111 2222223
Q ss_pred -HHHHHHHHHHHHHHHHHHhhcCCCeEEcCC-CCcceEEEecCCHHHHHHHHHHcCCeeeee------cCCeEEEEeccC
Q 001586 443 -LKTIAQRVHGLAGTFALGLKKLGTVEVQGL-PFFDTVKVKCADAHAIASAAYKIEMNLRVV------DSNTVTASFDET 514 (1049)
Q Consensus 443 -l~~ia~~~~~~a~~l~~~L~~~g~~~v~~~-~~~~~v~i~~~~~~~v~~~L~~~gI~~~~~------~~~~vris~~~~ 514 (1049)
.+.+.++...+.+++.+.|++++.+++.+. ..| +.+.++...++.++|.++||.+... ..+.+|++++.
T Consensus 242 ~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~f--~~~~~~~~~~l~~~l~~~gi~v~pg~~f~~~~~~~iRi~~~~- 318 (330)
T TIGR01140 242 WQAATRARLAAERARLAALLARLGGLEVVGGTALF--LLVRTPDAAALHEALARRGILIRDFDNFPGLDPRYLRFALPT- 318 (330)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCceECCCCCeE--EEEEcCCHHHHHHHHHHCCEEEEECCCCCCCCCCEEEEEecC-
Confidence 356778888889999999998864555432 222 3344545678999999999987542 13689999874
Q ss_pred CCHHHHHHHHHHHh
Q 001586 515 TTLEDVDKLFIVFA 528 (1049)
Q Consensus 515 ~t~edid~lv~aL~ 528 (1049)
..++ ++|+.+|+
T Consensus 319 -~~~~-~~~~~~l~ 330 (330)
T TIGR01140 319 -DEEN-DRLEEALA 330 (330)
T ss_pred -HHHH-HHHHHhhC
Confidence 3356 99988873
No 484
>PRK07505 hypothetical protein; Provisional
Probab=99.41 E-value=1e-10 Score=137.53 Aligned_cols=317 Identities=15% Similarity=0.157 Sum_probs=176.0
Q ss_pred CCccccccCCCCCC-CCCcHHHHHHHHhCCc-cc-cccCCChhhHhhhHHHHHHHHHHHHHHHhCCCCcceEeccchHHH
Q 001586 164 NKVYKSFIGMGYYN-THVPPVILRNIMENPA-WY-TQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAA 240 (1049)
Q Consensus 164 n~~~~~~lG~g~y~-~~~p~~i~~~~~~~~~-~~-t~ytpyq~e~sqg~le~l~e~q~~ia~L~G~~~~n~sl~~~~Ta~ 240 (1049)
++.|.+|.+.++.+ |.-|.++. ++.+.-. |- + +++.+.. ....+...++++.+++++|. .+.++.+|+.+
T Consensus 45 g~~~ld~~s~~~lgl~~~p~v~~-A~~~~l~~~g~~--~~~~~~~-~~~~~~~~~l~~~la~~~~~---~~~~~~sG~~a 117 (402)
T PRK07505 45 GHTFVNFVSCSYLGLDTHPAIIE-GAVDALKRTGSL--HLSSSRT-RVRSQILKDLEEALSELFGA---SVLTFTSCSAA 117 (402)
T ss_pred CceEEEeecCCccCCCCCHHHHH-HHHHHHHHhCCC--CCCccch-hhhhHHHHHHHHHHHHHhCC---CEEEECChHHH
Confidence 34466777766666 55666653 4443211 10 1 1111111 12355678899999999997 35556666666
Q ss_pred HHHHH-HHhh-hcc-CCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc---chhhc-cCCCEeEEEEEcC-CCCeee
Q 001586 241 AEAMA-MCNN-IQK-GKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---KDIDY-KSGDVCGVLVQYP-GTEGEV 312 (1049)
Q Consensus 241 ~eA~~-~a~~-~~~-~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~~---~~l~~-l~~~t~~V~v~~p-n~~G~i 312 (1049)
.++++ ++.. ... ++++.|+.+...|+++..... ..+ .+.+++.++. +++++ +.++++++++.+| |.+|.+
T Consensus 118 ~~~ai~~~~~~~~~~~~~~vi~~~~~~H~s~~~~~~-~~~-~~~~v~~~~~~d~~~l~~~~~~~~~~~vl~~p~~~~G~~ 195 (402)
T PRK07505 118 HLGILPLLASGHLTGGVPPHMVFDKNAHASLNILKG-ICA-DETEVETIDHNDLDALEDICKTNKTVAYVADGVYSMGGI 195 (402)
T ss_pred HHHHHHHHHhcccCCCCCCEEEEchhhhHhHHhhhh-hhh-cCCeEEEeCCCCHHHHHHHHhcCCCEEEEEecccccCCc
Confidence 66544 3322 111 123334556689997643221 122 2456777665 44555 5666778888887 688999
Q ss_pred ccHHHHHHHHHhCCcEEEEEeccccccCCCCC------Ccccc---e--EEEecC-ccccccCCCCCCceEEEEE-chhH
Q 001586 313 LDYGDFIKNAHANGVKVVMATDLLALTILKPP------GELGA---D--IVVGSA-QRFGVPMGYGGPHAAFLAT-SQEY 379 (1049)
Q Consensus 313 ~di~~I~~~ah~~galliV~a~~~alg~l~~p------~~~Ga---D--ivvgs~-k~lg~P~~~GGP~~G~l~~-~~~l 379 (1049)
.|+++|.++|+++|++++++ +..+++.+.+. ..+|. | +++.|. |.|+++ + |++.+ ++++
T Consensus 196 ~~~~~i~~l~~~~~~~li~D-Ea~~~~~~g~~g~~~~~~~~~~~~~d~~i~~~s~sK~~~~~------G-g~~~~~~~~~ 267 (402)
T PRK07505 196 APVKELLRLQEKYGLFLYID-DAHGLSIYGKNGEGYVRSELDYRLNERTIIAASLGKAFGAS------G-GVIMLGDAEQ 267 (402)
T ss_pred CCHHHHHHHHHHcCCEEEEE-CcccccCcCCCCCchHHHHcCCCCCCCeEEEEechhhhhcc------C-eEEEeCCHHH
Confidence 99999999999999999994 34433222111 12332 4 455564 877532 1 56654 4555
Q ss_pred HhcCCCceeeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHH
Q 001586 380 KRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFAL 459 (1049)
Q Consensus 380 ~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irrekaTsni~t~~~l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~ 459 (1049)
.+.+... ...+.+ . .|+++ .+..+..+++ ..+..+.+.+..++..++..++.+
T Consensus 268 ~~~~~~~----------~~~~t~------------~--~~~~~-~a~aa~~a~l--~~~~~~~~~~~~~~l~~~~~~~~~ 320 (402)
T PRK07505 268 IELILRY----------AGPLAF------------S--QSLNV-AALGAILASA--EIHLSEELDQLQQKLQNNIALFDS 320 (402)
T ss_pred HHHHHHh----------CCCcee------------C--CCCCH-HHHHHHHHHH--HHHhccCcHHHHHHHHHHHHHHHH
Confidence 5443100 000100 0 11111 1222233332 344555666665655555554443
Q ss_pred HhhcCCCeEEcCCCCcceEEEecCC---HHHHHHHHHHcCCeeeeec-------CCeEEEEeccCCCHHHHHHHHHHHhC
Q 001586 460 GLKKLGTVEVQGLPFFDTVKVKCAD---AHAIASAAYKIEMNLRVVD-------SNTVTASFDETTTLEDVDKLFIVFAG 529 (1049)
Q Consensus 460 ~L~~~g~~~v~~~~~~~~v~i~~~~---~~~v~~~L~~~gI~~~~~~-------~~~vris~~~~~t~edid~lv~aL~~ 529 (1049)
.+... ....++....+.++. +.++.++|.++||.++... .+.+|+++...+|+||+|+++++|..
T Consensus 321 ~~~~~-----~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~lRi~~~~~~t~eei~~~~~~l~~ 395 (402)
T PRK07505 321 LIPTE-----QSGSFLPIRLIYIGDEDTAIKAAKQLLDRGFYTSPVFFPVVAKGRAGLRIMFRASHTNDEIKRLCSLLKE 395 (402)
T ss_pred HHHhc-----CCCCCCCEEEEEeCCHHHHHHHHHHHHHCCCeEeeecCCCCCCCCceEEEecCccCCHHHHHHHHHHHHH
Confidence 32211 011222212222222 5689999999999886541 25899999999999999999999963
No 485
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=99.41 E-value=1.2e-10 Score=134.45 Aligned_cols=266 Identities=15% Similarity=0.108 Sum_probs=170.3
Q ss_pred HHHHHHHHHHhCCCCcceEeccchHHHHHHHHHHhhhccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCcc----
Q 001586 214 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK---- 289 (1049)
Q Consensus 214 ~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a~~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~~~---- 289 (1049)
.++++.+|+++|.++.++.+++|+++++..+..++ . ++||+|+++.-.++.+...+ +..|.+++.++.+
T Consensus 62 ~~lr~~ia~~~~~~~~~i~it~G~~~~l~~~~~~l-~--~~gd~Vlv~~p~y~~~~~~~----~~~g~~~~~v~~~~~~~ 134 (351)
T PRK14807 62 EKLREELARYCSVVPTNIFVGNGSDEIIHLIMLAF-I--NKGDVVIYPHPSFAMYSVYS----KIAGAVEIPVKLKEDYT 134 (351)
T ss_pred HHHHHHHHHHhCCCcccEEEecCHHHHHHHHHHHh-c--CCCCEEEEeCCChHHHHHHH----HHcCCeEEEeecCCCCC
Confidence 45778999999999889999999987666554443 2 38899999988887655543 3468888777653
Q ss_pred ----hhhc-cC-CCEeEEEEEcC-CCCeeeccHHHHHHHHHhCCcEEEEEeccccc-cC-CCC-CCcccceEEEecC-cc
Q 001586 290 ----DIDY-KS-GDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLAL-TI-LKP-PGELGADIVVGSA-QR 358 (1049)
Q Consensus 290 ----~l~~-l~-~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~al-g~-l~~-p~~~GaDivvgs~-k~ 358 (1049)
++++ ++ .++++|++.+| |++|.+.+.+++.+++++++.+++++.....+ +- ..+ .....--|+++|. |.
T Consensus 135 ~d~~~l~~~~~~~~~k~v~l~~p~NPtG~~~~~~~l~~l~~~~~~~~ivDe~y~~~~~~~~~~~~~~~~~vi~~~S~SK~ 214 (351)
T PRK14807 135 YDVGSFIKVIEKYQPKLVFLCNPNNPTGSVIEREDIIKIIEKSRGIVVVDEAYFEFYGNTIVDVINEFENLIVLRTLSKA 214 (351)
T ss_pred CCHHHHHHHhhccCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCEEEEeCcchhhcccchHHHhhhCCCEEEEecchHh
Confidence 3334 54 37899999998 79999999999999999988888884322111 10 000 1112234677776 88
Q ss_pred ccccCCCCCCceEEEEEchhHHhcCCCceeeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHh
Q 001586 359 FGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYH 438 (1049)
Q Consensus 359 lg~P~~~GGP~~G~l~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irrekaTsni~t~~~l~a~~aa~y~~~~ 438 (1049)
|+.| |=-+|++...+++.+.+- +.+...+++ .+.-.++. .++
T Consensus 215 ~~~~----GlRiG~~v~~~~~~~~~~----------------------------~~~~~~~~~---~~~q~~~~---~~l 256 (351)
T PRK14807 215 FGLA----GLRVGYAVANENILKYLN----------------------------LVKSPYNIN---SLSQVIAL---KVL 256 (351)
T ss_pred cccc----hhceeeeecCHHHHHHHH----------------------------HccCCCCcC---HHHHHHHH---HHH
Confidence 8644 224688887776665441 000111111 11111111 111
Q ss_pred CcchHHHHHHHHHHHHHHHHHHhhcCCCeEEcCCCCcceEEEecCCHHHHHHHHHHcCCeeeeec-----CCeEEEEecc
Q 001586 439 GPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVVD-----SNTVTASFDE 513 (1049)
Q Consensus 439 g~~Gl~~ia~~~~~~a~~l~~~L~~~g~~~v~~~~~~~~v~i~~~~~~~v~~~L~~~gI~~~~~~-----~~~vris~~~ 513 (1049)
....+++..++..++.+++.+.|+++.|+++.... ..-+.+.++...++.+.|.++||.++... .+.+|+++.
T Consensus 257 ~~~~~~~~~~~~~~~r~~l~~~l~~~~g~~~~~~~-~~~~~i~~~~~~~~~~~l~~~gV~v~~~~~~~~~~~~iRis~~- 334 (351)
T PRK14807 257 RTGVLKERVNYILNERERLIKELSKIPGIKVYPSK-TNFILVKFKDADYVYQGLLERGILVRDFSKVEGLEGALRITVS- 334 (351)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhCCCcEECcCC-ccEEEEEcCCHHHHHHHHHHCCEEEEECCCCCCCCCeEEEEcC-
Confidence 12234555566677777888888876337765321 11133555557788999999999886532 367999987
Q ss_pred CCCHHHHHHHHHHHh
Q 001586 514 TTTLEDVDKLFIVFA 528 (1049)
Q Consensus 514 ~~t~edid~lv~aL~ 528 (1049)
+.++.++|+++|.
T Consensus 335 --~~~~~~~l~~~l~ 347 (351)
T PRK14807 335 --SCEANDYLINGLK 347 (351)
T ss_pred --CHHHHHHHHHHHH
Confidence 6788999999885
No 486
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=99.41 E-value=7.6e-11 Score=141.67 Aligned_cols=306 Identities=14% Similarity=0.208 Sum_probs=178.5
Q ss_pred hcHHHHHHHHHHHHHHhhC----CCccccccCchHH-HHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHH-hcC
Q 001586 628 QGYQEMFNNLGEWLCTITG----FDSFSLQPNAGAA-GEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAA-MCG 701 (1049)
Q Consensus 628 ~G~~~~i~el~~~la~l~G----~~~~~l~~~sGa~-ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~-~~G 701 (1049)
+|..++...+.+++.+..| ++...+..++|++ +.+.. ++.+. .+++.|+++...++.+...+. ..|
T Consensus 94 ~G~~~LR~aiA~~l~~~~g~~v~v~pe~Ivit~Ga~~al~~l---~~~l~-----~pGD~Vlv~~P~Y~~~~~~~~~~~G 165 (496)
T PLN02376 94 HGLKKFRQAIAHFMGKARGGKVTFDPERVVMSGGATGANETI---MFCLA-----DPGDVFLIPSPYYAAFDRDLRWRTG 165 (496)
T ss_pred CCcHHHHHHHHHHHHHHhCCCCcCChhhEEEccchHHHHHHH---HHHhC-----CCCCEEEECCCCccchHHHHHhhCC
Confidence 5766667677777777666 4554555555554 33322 33321 257899999887766666555 589
Q ss_pred CEEEEEcCCC--CCCCCHHHHHHHHHh---cCCCeEEEEEEcCC-cccccc--ccHHHHHHHHHHcCCEEEEeccccccc
Q 001586 702 MKIVSVGTDA--KGNINIEELRKAAEA---NRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQ 773 (1049)
Q Consensus 702 ~~Vv~V~~d~--~g~iD~~~L~~~i~~---~~~~taaV~it~Pn-~~G~i~--~di~eI~~lah~~G~ll~vD~A~~~a~ 773 (1049)
++++.|+++. +..+|++++++++++ ...++++|++++|+ .+|.+- +.+++|.++|+++|+++++|.++....
T Consensus 166 ~~vv~v~~~~~~~~~~~~~~le~a~~~a~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEiY~~~~ 245 (496)
T PLN02376 166 VEIIPVPCSSSDNFKLTVDAADWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIYAATV 245 (496)
T ss_pred CEEEEEeCCCCccCcCCHHHHHHHHHHHHhcCCCeeEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccccc
Confidence 9999999963 467999999876532 23578999999995 699775 247889999999999999999864211
Q ss_pred -cC--cCCC----Ccc-----CCcE--EEeCCCcccccCCCCCCCceeEEEEcc-cccccCCCCccccCCCCCCCCCCCC
Q 001586 774 -VG--LTSP----GYI-----GADV--CHLNLHKTFCIPHGGGGPGMGPIGVKK-HLAPFLPSHPVVSTGGIPAPEKSQP 838 (1049)
Q Consensus 774 -~g--l~~P----g~~-----GaDi--~~~s~hK~f~~P~g~GGPg~G~i~~~~-~l~~~lpg~~vg~t~~~~~~~~~~~ 838 (1049)
.+ +.+. .+. ..|. ++.+++|.|++| |-++|+++... .+...+.. ...
T Consensus 246 f~~~~~~si~~l~~~~~~~~~~~~~v~vv~S~SK~~glp----GlRvG~li~~~~~l~~~~~~--------------~~~ 307 (496)
T PLN02376 246 FAGGDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLP----GFRVGIVYSFNDSVVSCARK--------------MSS 307 (496)
T ss_pred cCCCCcccHHHhhccccccccCCCeEEEEEeccccCCCC----cceEEEEEECCHHHHHHHHH--------------Hhh
Confidence 11 1110 010 1232 356888988655 78899999853 33322100 000
Q ss_pred CCCCCccchhhHHHHHHHHHHHHHHchhhH-----HHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeEEEEeccCc
Q 001586 839 LGTIAAAPWGSALILPISYTYIAMMGSKGL-----TEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGL 912 (1049)
Q Consensus 839 t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl-----~~~~~~~~~~a~yL~~~L~~~-~~v~~~g~~g~~~~e~iv~~~~~ 912 (1049)
...+++ ..+. ++. .++....+ .+..++..++.+.+.+.|++. +.+. .+++..+ +.++++..
T Consensus 308 ~~~vs~--~~Q~----a~~---~~L~d~~~~~~~l~~~r~~l~~r~~~l~~~L~~~gi~~~--~~~aG~f--lwi~l~~~ 374 (496)
T PLN02376 308 FGLVSS--QTQL----MLA---SMLSDDQFVDNFLMESSRRLGIRHKVFTTGIKKADIACL--TSNAGLF--AWMDLRHL 374 (496)
T ss_pred cCCCCH--HHHH----HHH---HHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccc--CCCceEE--EEEEchhh
Confidence 111221 1111 111 22222222 222333445566777888764 3322 2223222 45676532
Q ss_pred ccc-CCC-CHHHHHHHHHH-CCcccC-CCCC--CCCCEEEEEccCCCCHHHHHHHHHHHHHHHHHHH
Q 001586 913 KNT-AGI-EPEDVAKRLMD-YGFHGP-TMSW--PVPGTLMIEPTESESKEELDRYCDALISIREEIA 973 (1049)
Q Consensus 913 ~~~-~g~-~~~~v~k~L~~-~Gi~~~-~~~~--p~~~~lri~~t~~~t~eeid~fv~aL~~i~~~i~ 973 (1049)
... ... ...++.+.|.+ .|+.+. +..| ..++++||++.. .++++++..++.|++++.+.+
T Consensus 375 ~~~~~~~~~e~~l~~~ll~~~gV~v~pGs~F~~~~~g~~Ri~fa~-~~~~~l~~al~rl~~~l~~~~ 440 (496)
T PLN02376 375 LRDRNSFESEIELWHIIIDKVKLNVSPGSSFRCTEPGWFRICFAN-MDDDTLHVALGRIQDFVSKNK 440 (496)
T ss_pred hccCCchhHHHHHHHHHHHcCCEEEeCccccCCCCCCEEEEEeeC-CCHHHHHHHHHHHHHHHHHhh
Confidence 110 001 23567888776 598864 3334 235899999974 246778888888877765433
No 487
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=99.41 E-value=2.5e-11 Score=139.29 Aligned_cols=271 Identities=18% Similarity=0.227 Sum_probs=167.8
Q ss_pred HHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCEEEEEcCCCCCCC
Q 001586 636 NLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNI 715 (1049)
Q Consensus 636 el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~Vv~V~~d~~g~i 715 (1049)
++++.+++.+|.+...+..++|++. +..++++.+ ++++|+++...++.+...+++.|++++.++.++++.+
T Consensus 59 ~lr~~ia~~~~~~~~~I~~t~G~~~--~l~~~~~~~-------~gd~V~v~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~ 129 (337)
T PRK03967 59 PLREAIAEFYGLDAENIAVGNGSDE--LISYLVKLF-------EGKHIVITPPTFGMYSFYAKLNGIPVIDVPLKEDFTI 129 (337)
T ss_pred HHHHHHHHHhCcCcceEEEcCCHHH--HHHHHHHHh-------CCCeEEEeCCChHHHHHHHHHcCCeEEEeecCCCCCc
Confidence 5677888888887766666666552 222333322 3578999887665555557889999999999877889
Q ss_pred CHHHHHHHHHhcCCCeEEEEEEcCC-ccccccccHHHHHHHHHHcCCEEEEeccccccccCcCCC--CccCCc-EEEeCC
Q 001586 716 NIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSP--GYIGAD-VCHLNL 791 (1049)
Q Consensus 716 D~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~P--g~~GaD-i~~~s~ 791 (1049)
|++++++++ ++++++++++|+ .+|.+- +.++|.++++ +|+++++|+++.. +..-..+ .+.... +++.|+
T Consensus 130 d~~~l~~~~----~~~~~v~~~~P~NPtG~~~-~~~~l~~i~~-~~~~ii~De~y~~-~~~~~~~~~~~~~~~vi~l~S~ 202 (337)
T PRK03967 130 DGERIAEKA----KNASAVFICSPNNPTGNLQ-PEEEILKVLE-TGKPVVLDEAYAE-FSGKSLIGLIDEYPNLILLRTF 202 (337)
T ss_pred CHHHHHHhc----cCCCEEEEeCCCCCCCCCC-CHHHHHHHHh-cCCEEEEECchhh-hcccchHHHHhhCCCEEEEecc
Confidence 999998865 467788899994 699887 6899999995 7999999998631 1110000 011112 556778
Q ss_pred CcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhhHHHH
Q 001586 792 HKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEA 871 (1049)
Q Consensus 792 hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~ 871 (1049)
.|+|++| |-++|++++++++...+-.. . ...+++ ...+. ++...+. ..+-+.+.
T Consensus 203 SK~~~l~----GlRiG~iv~~~~~i~~~~~~------------~--~~~~~~--~~~q~----~~~~~l~--~~~~~~~~ 256 (337)
T PRK03967 203 SKAFGLA----GIRAGYAIANEEIIDALYRI------------K--PPFSLN--ILTMK----IVRLALD--HYDLIEER 256 (337)
T ss_pred hHhhcch----hhhheeeecCHHHHHHHHhh------------c--CCCCCC--HHHHH----HHHHHHh--CHHHHHHH
Confidence 8888544 77899999887665443100 0 001111 11111 1122221 22223333
Q ss_pred HHHHHHHHHHHHHHHhccCCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEccC
Q 001586 872 SKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTE 951 (1049)
Q Consensus 872 ~~~~~~~a~yL~~~L~~~~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~p~~~~lri~~t~ 951 (1049)
.+...++.+.+.+.|.+. .+++ .+.+ +++++ .+.+.|.++|+.+..+.....+++|+++.
T Consensus 257 ~~~~~~~r~~l~~~L~~~---~~~~-~~~~---~~~~~------------~~~~~l~~~gi~v~~~~~~~~~~~Ri~~~- 316 (337)
T PRK03967 257 IDYIIKERERVRRELGEY---AYPS-DANF---LLLKL------------DAYDYLLENGIVVRKLSGRLEGHIRVTVG- 316 (337)
T ss_pred HHHHHHHHHHHHHHhccC---cCCC-CCcE---EEEhH------------HHHHHHHHCCEEEEeCCCCCCCeEEEecC-
Confidence 344455666777777653 1211 1211 23332 26788888999875432112578999985
Q ss_pred CCCHHHHHHHHHHHHHHHH
Q 001586 952 SESKEELDRYCDALISIRE 970 (1049)
Q Consensus 952 ~~t~eeid~fv~aL~~i~~ 970 (1049)
+.++.++|+++|+++.+
T Consensus 317 --~~~~~~~l~~~l~~~~~ 333 (337)
T PRK03967 317 --KREENDEFIKALKEIKE 333 (337)
T ss_pred --CHHHHHHHHHHHHHHHH
Confidence 57889999999987654
No 488
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=99.41 E-value=1.1e-10 Score=134.81 Aligned_cols=297 Identities=12% Similarity=0.142 Sum_probs=183.4
Q ss_pred CCCCCCCCCcHHHHHHHHhCCccccccCCChhhHhhhHHHHHHHHHHHHHHHhCCCCcceEeccchHHHHHHHHHHhhhc
Q 001586 172 GMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQ 251 (1049)
Q Consensus 172 G~g~y~~~~p~~i~~~~~~~~~~~t~ytpyq~e~sqg~le~l~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a~~~~ 251 (1049)
+.|-.|+..|+.+.+.+.+.-.-.+.|. + ++ ..++++.+|+++|.++.++.+++|++.++..+..++ .
T Consensus 26 ~~~~~~~~~p~~~~~a~~~~~~~~~~y~----~--~~----~~~lr~~ia~~~~~~~~~i~it~Ga~~~l~~~~~~l--~ 93 (356)
T PRK08056 26 SANINPLGMPVSLKRAIIDNLDCAERYP----D--VE----YRHLHQALARHHQVPASWILAGNGETESIFAVVSGL--K 93 (356)
T ss_pred ccccCCCCCCHHHHHHHHHHHHhcccCc----C--cc----HHHHHHHHHHHhCcChhhEEECCCHHHHHHHHHHHh--C
Confidence 4566666777777655543211122232 1 11 356778999999999999999999887666554443 2
Q ss_pred cCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCcc---------hhhc-cCCCEeEEEEEcC-CCCeeecc---HHH
Q 001586 252 KGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK---------DIDY-KSGDVCGVLVQYP-GTEGEVLD---YGD 317 (1049)
Q Consensus 252 ~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~~~---------~l~~-l~~~t~~V~v~~p-n~~G~i~d---i~~ 317 (1049)
+++ +++..-.++.+...+ +..|++++.++.+ ++.+ +.+++++|++.+| |++|.+.+ +++
T Consensus 94 --~g~-viv~~P~y~~~~~~~----~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~k~v~l~~p~NPTG~~~~~~~~~~ 166 (356)
T PRK08056 94 --PRR-AMIVTPGFAEYRRAL----QQVGCEIRRYSLREADGWQLTDAILEALTPDLDCLFLCTPNNPTGLLPERQLLQA 166 (356)
T ss_pred --CCC-EEEeCCCcHHHHHHH----HHcCCeEEEEecccccCCCccHHHHHhccCCCCEEEEeCCcCCCCCCCCHHHHHH
Confidence 555 555555566655554 4568888887652 1222 5678999999998 79999987 888
Q ss_pred HHHHHHhCCcEEEEEeccccc---c--CCCCCCcccceEEEecC-ccccccCCCCCCceEEEEEc-hhHHhcCCCceeee
Q 001586 318 FIKNAHANGVKVVMATDLLAL---T--ILKPPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATS-QEYKRMMPGRIVGV 390 (1049)
Q Consensus 318 I~~~ah~~galliV~a~~~al---g--~l~~p~~~GaDivvgs~-k~lg~P~~~GGP~~G~l~~~-~~l~~~lpgrivG~ 390 (1049)
|+++|+++|++++++.-...+ + .+.....+.-+|+++|. |.|+.| |=-.||+++. +++.+.+-
T Consensus 167 i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~----G~RiG~~v~~~~~~~~~l~------ 236 (356)
T PRK08056 167 IAERCKSLNIALILDEAFIDFIPDETGFIPQLADNPHLWVLRSLTKFYAIP----GLRLGYLVNSDDAAVARMR------ 236 (356)
T ss_pred HHHHHHhcCCEEEEecchhccCCcchHHHHHhccCCCEEEEEechhhccCc----chhheeeecCCHHHHHHHH------
Confidence 999999999999994311111 1 00111234567888886 888654 2356787763 34433330
Q ss_pred eecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEc
Q 001586 391 SIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQ 470 (1049)
Q Consensus 391 s~d~~g~~~~~l~lqtreq~irrekaTsni~t~~~l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~g~~~v~ 470 (1049)
+-. .+.+. +.+ +..++.. .+.+.+-++++.++..+..+++.+.|++++++.+.
T Consensus 237 ----------------------~~~--~~~~~-~~~-~~~~a~~-~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~ 289 (356)
T PRK08056 237 ----------------------RQQ--MPWSI-NAF-AALAGEV-ILQDRAYQQATWQWLAEEGARFYQALCALPLLTVW 289 (356)
T ss_pred ----------------------HhC--CCCch-hHH-HHHHHHH-HhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEc
Confidence 000 01111 122 2222221 11222234566677778888999999887447765
Q ss_pred CCCCcceEEEecCC-HHHHHHHHHHcCCeeeeec------CCeEEEEeccCCCHHHHHHHHHHHh
Q 001586 471 GLPFFDTVKVKCAD-AHAIASAAYKIEMNLRVVD------SNTVTASFDETTTLEDVDKLFIVFA 528 (1049)
Q Consensus 471 ~~~~~~~v~i~~~~-~~~v~~~L~~~gI~~~~~~------~~~vris~~~~~t~edid~lv~aL~ 528 (1049)
.+. ..-+.++++. ..++.+.|.++||.++... .+.||+++. +.++.++|+++|.
T Consensus 290 ~~~-~~~~~~~~~~~~~~~~~~l~~~gI~v~~~~~f~~~~~~~iRis~~---~~~~~~~l~~~l~ 350 (356)
T PRK08056 290 PGR-ANYLFLRCERPDIDLQRALLTQRILIRSCANYPGLDSRYYRVAIR---SAAENERLLAALR 350 (356)
T ss_pred CCC-CcEEEEEcCCChHHHHHHHHHCCeEEEECCCCCCCCCCEEEEEEc---CHHHHHHHHHHHH
Confidence 321 1123445544 6789999999999875431 368999986 7899999999885
No 489
>PRK05839 hypothetical protein; Provisional
Probab=99.41 E-value=3.8e-11 Score=139.69 Aligned_cols=289 Identities=11% Similarity=0.007 Sum_probs=165.9
Q ss_pred hcHHHHHHHHHHHHHHhhCC--CccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCEEE
Q 001586 628 QGYQEMFNNLGEWLCTITGF--DSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIV 705 (1049)
Q Consensus 628 ~G~~~~i~el~~~la~l~G~--~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~Vv 705 (1049)
+|..++...+++++.+.+|. +...+..++|++.. ...+++.+... ++++.|+++......+...+.+.|++++
T Consensus 60 ~G~~~lr~aia~~l~~~~g~~~~~~~I~it~G~~~a--l~~~~~~~~~~---~~gd~vlv~~P~y~~~~~~~~~~g~~v~ 134 (374)
T PRK05839 60 AGEESLREAQRGFFKRRFKIELKENELIPTFGTREV--LFNFPQFVLFD---KQNPTIAYPNPFYQIYEGAAIASRAKVL 134 (374)
T ss_pred CCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHH--HHHHHHHHhcC---CCCCEEEECCCCchhhHHHHHhcCCEEE
Confidence 56666777778888888784 44556666776532 22222322111 2467899987766566666889999999
Q ss_pred EEcCCCC--CCCCHHHHHHHHHhcCCCeEEEEEEcCC-cccccc--ccHHHHHHHHHHcCCEEEEeccccccccCcCCC-
Q 001586 706 SVGTDAK--GNINIEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSP- 779 (1049)
Q Consensus 706 ~V~~d~~--g~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~--~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~P- 779 (1049)
.++.+++ ..+|+.+. .+ +++++|++++|+ .+|.+- +.+++|+++|+++|+++++|.++..-...-..|
T Consensus 135 ~v~~~~~~~~~~d~~~~--~~----~~~k~v~i~nP~NPTG~~~s~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~~~~~s 208 (374)
T PRK05839 135 LMPLTKENDFTPSLNEK--EL----QEVDLVILNSPNNPTGRTLSLEELIEWVKLALKHDFILINDECYSEIYENTPPPS 208 (374)
T ss_pred EeecccccCCcCCcchh--hh----ccccEEEEeCCCCCcCcccCHHHHHHHHHHHHHcCCEEEeccchhhcccCCCCCC
Confidence 9999754 35555443 23 468899999995 689774 358889999999999999999864211000111
Q ss_pred -Cc-------cCC-c-EEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhh
Q 001586 780 -GY-------IGA-D-VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGS 849 (1049)
Q Consensus 780 -g~-------~Ga-D-i~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~ 849 (1049)
.. ... . +++.++.|+|+. .|-++|++..++++...+-.. ......++++ ..+
T Consensus 209 ~~~~~~~~~~~~~~~vi~~~SfSK~~~~----~GlRiG~ii~~~~~~~~~~~~------------~~~~~~~~~~--~~q 270 (374)
T PRK05839 209 LLEASILVGNESFKNVLVINSISKRSSA----PGLRSGFIAGDASILKKYKAY------------RTYLGCASPL--PLQ 270 (374)
T ss_pred HhhhhcccCccccCcEEEEeccccccCC----ccceeEEEecCHHHHHHHHHH------------HhhcCCCCCh--HHH
Confidence 00 011 1 556778887754 478899999887655433100 0000011111 111
Q ss_pred HHHHHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHhccCCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHHH
Q 001586 850 ALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMD 929 (1049)
Q Consensus 850 ~~~~~~a~a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~ 929 (1049)
. ++.+ .+ ...+-+++..+...++.+++.+.|. +.. +.+..+ +.++++ +..+++++|.+
T Consensus 271 ~---~~~~-~l--~~~~~~~~~~~~~~~~~~~~~~~l~----~~~--p~gg~f--i~~~~~--------~~~~~~~~l~~ 328 (374)
T PRK05839 271 K---AAAV-AW--LDDEHAEFFRNIYAKNLKLAREILG----ITI--PPATFY--VWLPVD--------NDEEFTKKLYQ 328 (374)
T ss_pred H---HHHH-Hh--ccchHHHHHHHHHHHHHHHHHHhcC----CCC--CCeeEE--EEEeCC--------ChHHHHHHHHH
Confidence 1 1111 11 1122233333334444445544442 211 112221 345543 34678888864
Q ss_pred -CCcccCCC-CCC----CCCEEEEEccCCCCHHHHHHHHHHHHHHH
Q 001586 930 -YGFHGPTM-SWP----VPGTLMIEPTESESKEELDRYCDALISIR 969 (1049)
Q Consensus 930 -~Gi~~~~~-~~p----~~~~lri~~t~~~t~eeid~fv~aL~~i~ 969 (1049)
+|+.+... .|. ..+++||+++. +.+++.+.++.|++++
T Consensus 329 ~~gi~v~pg~~f~~~~~~~~~iRis~~~--~~~~~~~~l~~l~~~l 372 (374)
T PRK05839 329 NEGIKVLPGSFLGRNGIGKGYVRIALVY--DTPKLEKALEIIKTYL 372 (374)
T ss_pred HCCEEEeCchhhCCCCCCCCeEEEEecC--CHHHHHHHHHHHHHHh
Confidence 89986432 222 24899999964 5788888888887764
No 490
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=99.41 E-value=1.7e-10 Score=132.97 Aligned_cols=267 Identities=14% Similarity=0.153 Sum_probs=168.9
Q ss_pred HHHHHHHh----CC--CCc-ceEeccchHHHHHHHHHHhhhccC-CCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc
Q 001586 217 QTMIADLT----GL--PMS-NASLLDEGTAAAEAMAMCNNIQKG-KKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL 288 (1049)
Q Consensus 217 q~~ia~L~----G~--~~~-n~sl~~~~Ta~~eA~~~a~~~~~~-~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~~ 288 (1049)
++.+++.+ |. ++. ++.+++|++.++..+.+++. ..+ ++|+|++++-.|+.+...++ ..|++++.++.
T Consensus 42 r~aia~~~~~~~g~~~~~~~~Iiit~Gs~~ai~~~~~~~~-~~g~~~d~Vl~~~p~y~~~~~~~~----~~g~~~~~v~~ 116 (350)
T TIGR03537 42 REAISGWFERRFGVKLDPDAQVLPSAGSKEAIFHFPLVFI-DPEEDRRRVIFGTPGYPVYERGAL----FAGGEPTAVKL 116 (350)
T ss_pred HHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHHHHHHHc-CCCCCCceEEEcCCCCcchHHHHH----hcCCEEEEccc
Confidence 34555543 64 455 79999999877766655542 211 23799999999998888764 36888887765
Q ss_pred c----------hhhc-cCCCEeEEEEEcC-CCCeeecc---HHHHHHHHHhCCcEEEEEeccccccCCC-CC---Ccccc
Q 001586 289 K----------DIDY-KSGDVCGVLVQYP-GTEGEVLD---YGDFIKNAHANGVKVVMATDLLALTILK-PP---GELGA 349 (1049)
Q Consensus 289 ~----------~l~~-l~~~t~~V~v~~p-n~~G~i~d---i~~I~~~ah~~galliV~a~~~alg~l~-~p---~~~Ga 349 (1049)
+ ++++ +.++++++++.+| |++|.+.+ +++|+++|+++|++++++. ..+..... ++ ..++.
T Consensus 117 ~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De-~y~~~~~~~~~~~~~~~~~ 195 (350)
T TIGR03537 117 KKEDGFLLRLEKVEKSILEETKIVWINYPHNPTGATAPRSYLKETIAMCREHGIILCSDE-CYTEIYFGEPPHSALEVGI 195 (350)
T ss_pred CcccCCccCHHHHHHhhhhccEEEEEeCCCCCcCcccCHHHHHHHHHHHHHcCcEEEEec-cccccccCCCCCchhhcCc
Confidence 2 2333 5678999999988 79999887 8999999999999999943 22211111 11 12233
Q ss_pred e--EEEecC-ccccccCCCCCCceEEEEEchhHHhcCCCceeeeeecCCCCcceeeecccccccccccccCCCccchhHH
Q 001586 350 D--IVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQAL 426 (1049)
Q Consensus 350 D--ivvgs~-k~lg~P~~~GGP~~G~l~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irrekaTsni~t~~~l 426 (1049)
| |+++|. |.||.| |=-.|++...+++..++- +-+.+.+++++...
T Consensus 196 ~~~i~~~s~SK~~g~~----GlRiG~~~~~~~~~~~~~----------------------------~~~~~~~~~~~~~~ 243 (350)
T TIGR03537 196 ENVLAFHSLSKRSGMT----GYRSGFVAGDEKLISFLR----------------------------KLRANFGVASPDFV 243 (350)
T ss_pred CCEEEEeecccccCCc----cccceeeecCHHHHHHHH----------------------------HHHHhhccCCCHHH
Confidence 3 667775 877543 113578877666655441 00111233332221
Q ss_pred HHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEcCCCCcce-EEEecCC---HHHHHHHHHHcCCeeeee
Q 001586 427 LANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDT-VKVKCAD---AHAIASAAYKIEMNLRVV 502 (1049)
Q Consensus 427 ~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~g~~~v~~~~~~~~-v~i~~~~---~~~v~~~L~~~gI~~~~~ 502 (1049)
...+.+ .+...+-++++.++..++.+.+.+.|++.| +++..+. ..- +-+.++. ..++.+.|.++||.+...
T Consensus 244 q~~~~~---~l~~~~~~~~~r~~l~~~~~~~~~~l~~~g-~~~~~~~-g~~~~~~~~~~~~~~~~l~~~L~~~gv~v~~g 318 (350)
T TIGR03537 244 QAAAKA---AWSDDNHVLERRKIFKRKRDLFIEFFNKVG-LEYLYPD-ATFYLWVKVPSGIDAKDYALRLLENGIVVAPG 318 (350)
T ss_pred HHHHHH---HhCCcHHHHHHHHHHHHHHHHHHHHHHHCC-CcccCCC-eEEEEEEECCCCCCHHHHHHHHHHCCEEEcCc
Confidence 111111 233344567777888888889999998886 7655321 111 2234443 678999999999987531
Q ss_pred ------cCCeEEEEeccCCCHHHHHHHHHHHh
Q 001586 503 ------DSNTVTASFDETTTLEDVDKLFIVFA 528 (1049)
Q Consensus 503 ------~~~~vris~~~~~t~edid~lv~aL~ 528 (1049)
.++.+|+++. .+.+++++.++.|+
T Consensus 319 ~~f~~~~~~~~Ri~~~--~~~~~~~~~l~~~~ 348 (350)
T TIGR03537 319 ENFGSGEEGYVRVALV--PTLEECEEALRLWE 348 (350)
T ss_pred hhhCCCCCCEEEEEec--CCHHHHHHHHHHHh
Confidence 1478999985 57889999888775
No 491
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.40 E-value=1.3e-10 Score=136.04 Aligned_cols=269 Identities=14% Similarity=0.120 Sum_probs=170.9
Q ss_pred HHHHHHHHHHh------CCCCcceEeccchHHHHHHHHHHhhhccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeC
Q 001586 214 LNFQTMIADLT------GLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSD 287 (1049)
Q Consensus 214 ~e~q~~ia~L~------G~~~~n~sl~~~~Ta~~eA~~~a~~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~ 287 (1049)
.++++.+|+++ +.++.++.+++|++.++..+..++ .. ++++|++++..|+.+...++ ..|++++.++
T Consensus 71 ~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~~-~~--~gd~vl~~~p~y~~~~~~~~----~~g~~~~~~~ 143 (393)
T PRK05764 71 PELREAIAAKLKRDNGLDYDPSQVIVTTGAKQALYNAFMAL-LD--PGDEVIIPAPYWVSYPEMVK----LAGGVPVFVP 143 (393)
T ss_pred HHHHHHHHHHHHHHhCCCCCHHHEEEeCCcHHHHHHHHHHh-cC--CCCEEEecCCCCcchHHHHH----HcCCEEEEEe
Confidence 34556666665 345678999999997777665554 22 78999999999988776654 4588887766
Q ss_pred cc----------hhhc-cCCCEeEEEEEcC-CCCeeec---cHHHHHHHHHhCCcEEEEEeccccccCC-----CC----
Q 001586 288 LK----------DIDY-KSGDVCGVLVQYP-GTEGEVL---DYGDFIKNAHANGVKVVMATDLLALTIL-----KP---- 343 (1049)
Q Consensus 288 ~~----------~l~~-l~~~t~~V~v~~p-n~~G~i~---di~~I~~~ah~~galliV~a~~~alg~l-----~~---- 343 (1049)
.+ ++++ +++++++|++.+| |++|.+. ++++|+++|+++|++++++. ..+.... .+
T Consensus 144 ~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De-~y~~~~~~~~~~~~~~~~ 222 (393)
T PRK05764 144 TGEENGFKLTVEQLEAAITPKTKALILNSPSNPTGAVYSPEELEAIADVAVEHDIWVLSDE-IYEKLVYDGAEFTSIASL 222 (393)
T ss_pred cCcccCCcCCHHHHHHhhCccceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEec-cccceeeCCCCcccHHHc
Confidence 52 3444 6678899999988 7899985 58999999999999999942 2111110 01
Q ss_pred -CCcccceEEEecC-ccccccCCCCCCceEEEEEchhHHhcCCCceeeeeecCCCCcceeeecccccccccccccCCCcc
Q 001586 344 -PGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNIC 421 (1049)
Q Consensus 344 -p~~~GaDivvgs~-k~lg~P~~~GGP~~G~l~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irrekaTsni~ 421 (1049)
+...+-+|+++|. |.|+.| |...|++..++++.+++... +. ..+.+.
T Consensus 223 ~~~~~~~~i~~~s~SK~~~~~----G~RiG~i~~~~~~~~~~~~~-------------------------~~-~~~~~~- 271 (393)
T PRK05764 223 SPELRDRTITVNGFSKAYAMT----GWRLGYAAGPKELIKAMSKL-------------------------QS-HSTSNP- 271 (393)
T ss_pred CCCCcCCEEEEecCcccccCc----cceeEEEecCHHHHHHHHHH-------------------------Hh-hcccCC-
Confidence 2234567888886 877644 23478888888776654100 00 001111
Q ss_pred chhHHHHHHHHH-HHHHhCcchHHHHHHHHHHHHHHHHHHhhcC-CCeEEcCCCCcceEEEecCC--------HHHHHHH
Q 001586 422 TAQALLANMAAM-YAVYHGPEGLKTIAQRVHGLAGTFALGLKKL-GTVEVQGLPFFDTVKVKCAD--------AHAIASA 491 (1049)
Q Consensus 422 t~~~l~a~~aa~-y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~-g~~~v~~~~~~~~v~i~~~~--------~~~v~~~ 491 (1049)
+.+.. .++. .+. ...+-++++.++..++.+++++.|+++ | +++..+...--+.+.++. +.++.+.
T Consensus 272 --~~~~q-~~~~~~l~-~~~~~~~~~~~~~~~~~~~l~~~L~~~~g-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (393)
T PRK05764 272 --TSIAQ-YAAVAALN-GPQDEVEEMRQAFEERRDLMVDGLNEIPG-LECPKPEGAFYVFPNVSKLLGKSITDSLEFAEA 346 (393)
T ss_pred --ChHHH-HHHHHHHc-CChHHHHHHHHHHHHHHHHHHHHHhhCCC-CcccCCCcceEEEEecccccccccCCHHHHHHH
Confidence 11111 1111 111 123445667777778888999999988 5 776532110011222221 3678777
Q ss_pred HH-HcCCeeeee----cCCeEEEEeccCCCHHHHHHHHHHHh
Q 001586 492 AY-KIEMNLRVV----DSNTVTASFDETTTLEDVDKLFIVFA 528 (1049)
Q Consensus 492 L~-~~gI~~~~~----~~~~vris~~~~~t~edid~lv~aL~ 528 (1049)
|. ++||.+..- .++.+|+|+. +++++++++++.|.
T Consensus 347 l~~~~gi~v~~g~~f~~~~~vRis~~--~~~~~~~~~i~~l~ 386 (393)
T PRK05764 347 LLEEAGVAVVPGIAFGAPGYVRLSYA--TSLEDLEEGLERIE 386 (393)
T ss_pred HHHhCCEEEccccccCCCCEEEEEec--CCHHHHHHHHHHHH
Confidence 75 579987532 1478999987 47999999999886
No 492
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.40 E-value=3.3e-11 Score=139.14 Aligned_cols=266 Identities=16% Similarity=0.167 Sum_probs=167.8
Q ss_pred HHHHHHHHHhCCCCcceEeccchHHHHHHHHHHhhhccCCC-CEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCcch---
Q 001586 215 NFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKK-KTFIIASNCHPQTIDICITRADGFDIKVVVSDLKD--- 290 (1049)
Q Consensus 215 e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a~~~~~~~g-~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~~~~--- 290 (1049)
++++.+|+.+|+++.++.+++|++.++..+..++. ++| |+|+++.-.++.+...+ +..|++++.++.++
T Consensus 64 ~Lr~aia~~~~~~~~~I~it~Gs~~~i~~~~~~~~---~~g~d~vlv~~P~y~~y~~~~----~~~g~~v~~v~~~~~~~ 136 (354)
T PRK04635 64 ELINAYSAYAGVAPEQILTSRGADEAIELLIRAFC---EPGQDSIACFGPTYGMYAISA----ETFNVGVKALPLTADYQ 136 (354)
T ss_pred HHHHHHHHHhCcCHHHEEEeCCHHHHHHHHHHHhc---CCCCCeEEEcCCChHHHHHHH----HHcCCEEEEEecCCCCC
Confidence 35678899999999999999999977766555442 256 89999998888766554 45688988887631
Q ss_pred --hhcc--CCCEeEEEEEcC-CCCeeeccHHHHHHHHHhC-CcEEEEEeccccccCCCCCCcc---cce-EEEecC-ccc
Q 001586 291 --IDYK--SGDVCGVLVQYP-GTEGEVLDYGDFIKNAHAN-GVKVVMATDLLALTILKPPGEL---GAD-IVVGSA-QRF 359 (1049)
Q Consensus 291 --l~~l--~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~-galliV~a~~~alg~l~~p~~~---GaD-ivvgs~-k~l 359 (1049)
++.+ .+++++|++.+| |++|.+.+.+++.++++.. +++++++.-...+....+...+ .-. |++.|. |.|
T Consensus 137 ~~~~~l~~~~~~~li~i~nP~NPTG~~~~~~~l~~l~~~~~~~~vivDeay~~~~~~~s~~~~~~~~~~~iv~~S~SK~~ 216 (354)
T PRK04635 137 LPLDYIEQLDGAKLVFICNPNNPTGTVIDRADIEQLIEMTPDAIVVVDEAYIEFCPEYSVADLLASYPNLVVLRTLSKAF 216 (354)
T ss_pred CCHHHHHhccCCCEEEEeCCCCCCCccCCHHHHHHHHHhCCCcEEEEeCchHhhccCcchHHHHhhCCCEEEEechHHHh
Confidence 1111 257899999998 7999999999999998764 6777774211111100010011 011 456665 777
Q ss_pred cccCCCCCCceEEEEEchhHHhcCCCceeeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhC
Q 001586 360 GVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHG 439 (1049)
Q Consensus 360 g~P~~~GGP~~G~l~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irrekaTsni~t~~~l~a~~aa~y~~~~g 439 (1049)
+.| |--+|++++++++.+.+-. + .. ..+.+... ..+++ .++.
T Consensus 217 ~l~----GlRlG~~i~~~~~~~~l~~-~---------------------------~~--~~~~~~~~--~~~a~--~~l~ 258 (354)
T PRK04635 217 ALA----GARCGFTLANEELIEILMR-V---------------------------IA--PYPVPLPV--SEIAT--QALS 258 (354)
T ss_pred hhh----HHHHhhhhCCHHHHHHHHh-h---------------------------cC--CCCCCHHH--HHHHH--HHHh
Confidence 533 2236888888877665410 0 00 01111111 11121 2222
Q ss_pred cchH---HHHHHHHHHHHHHHHHHhhcCCCeEEcCCCCcceEEEecCCHHHHHHHHHHcCCeeeeec----CCeEEEEec
Q 001586 440 PEGL---KTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVVD----SNTVTASFD 512 (1049)
Q Consensus 440 ~~Gl---~~ia~~~~~~a~~l~~~L~~~g~~~v~~~~~~~~v~i~~~~~~~v~~~L~~~gI~~~~~~----~~~vris~~ 512 (1049)
..|. ++..++..+..+++.+.|++++++++..+. ..-+.+++++..++.+.|.++||.++... ++.+|+|+
T Consensus 259 ~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~-g~f~~~~~~~~~~~~~~l~~~gv~v~~~~~~~~~~~lRis~- 336 (354)
T PRK04635 259 EAGLARMKFQVLDLNAQGARLQAALSMYGGAKVLEGN-GNYVLAKFDDVDAVFKALWDAGIVARAYKDPRLANCIRFSF- 336 (354)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHhCCCceECCCC-CcEEEEECCCHHHHHHHHHHCCEEEEECCCCCCCCeEEEEe-
Confidence 2333 344445566668889999988547765321 11233455556788888999999886542 46899996
Q ss_pred cCCCHHHHHHHHHHHhC
Q 001586 513 ETTTLEDVDKLFIVFAG 529 (1049)
Q Consensus 513 ~~~t~edid~lv~aL~~ 529 (1049)
.+.+|+++|+++|+.
T Consensus 337 --~~~e~~~~l~~al~~ 351 (354)
T PRK04635 337 --SNRAETDKLIGLIRN 351 (354)
T ss_pred --CCHHHHHHHHHHHHH
Confidence 489999999999963
No 493
>PRK07049 methionine gamma-lyase; Validated
Probab=99.40 E-value=5.5e-11 Score=140.34 Aligned_cols=211 Identities=17% Similarity=0.129 Sum_probs=144.6
Q ss_pred HHHHHHHHHhCCCCcceEeccchHHHHHHHHHHhhhccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeC----cch
Q 001586 215 NFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSD----LKD 290 (1049)
Q Consensus 215 e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a~~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~----~~~ 290 (1049)
.+++.+|++.|.+. +.++.+|++++.++++++. . +||+||+++..++.+...+...++.+|++++.++ .++
T Consensus 87 ~Le~~lA~leg~~~--~iv~~sG~~Ai~~~l~al~-~--~Gd~Vv~~~p~Y~~~~~~~~~~l~~~Gi~~v~~~~~~d~~~ 161 (427)
T PRK07049 87 IVEDRLAVYEGAES--AALFSSGMSAIATTLLAFV-R--PGDVILHSQPLYGGTETLLAKTFRNFGVGAVGFADGLSEAA 161 (427)
T ss_pred HHHHHHHHHhCCCc--EEEEccHHHHHHHHHHHHh-C--CCCEEEEcCCCcccHHHHHHHHHHhcCcEEEEEeCCCCHHH
Confidence 35579999999763 7788899887776666542 3 8899999999999988877655667899855443 234
Q ss_pred hhc-c-----CCCEeEEEEEcC-CCCeeeccHHHHHHHHHh------CCcEEEEEeccccccCCCCCCcccceEEEecC-
Q 001586 291 IDY-K-----SGDVCGVLVQYP-GTEGEVLDYGDFIKNAHA------NGVKVVMATDLLALTILKPPGELGADIVVGSA- 356 (1049)
Q Consensus 291 l~~-l-----~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~------~galliV~a~~~alg~l~~p~~~GaDivvgs~- 356 (1049)
+++ + .+++++|++.+| |++|.+.|+++|.++++. +|++++|+ +.+.-.....|.++|+||++.|.
T Consensus 162 l~~~l~~~~~~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvD-ety~~~~~~~pl~~g~divv~S~S 240 (427)
T PRK07049 162 IGAAAEAAAAKGRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACD-NTLLGPVFQKPLEHGADLSVYSLT 240 (427)
T ss_pred HHHHHHhhccCCCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEE-CCccccccCCccccCCCEEEEcCc
Confidence 443 3 257999999998 799999999999999998 78888884 44333344556788999999997
Q ss_pred ccccccCCCCCCceEEEEEchhHHhcCCCceeeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHH
Q 001586 357 QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAV 436 (1049)
Q Consensus 357 k~lg~P~~~GGP~~G~l~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irrekaTsni~t~~~l~a~~aa~y~~ 436 (1049)
|.|++ .+|--+|++..++++.+++- +.+...+.|. +++.+ |+.
T Consensus 241 K~~gG---~~glr~G~vv~~~~l~~~l~----------------------------~~~~~~g~~l-s~~~a-----~l~ 283 (427)
T PRK07049 241 KYVGG---HSDLVAGAVLGRKALIRQVR----------------------------ALRSAIGTQL-DPHSC-----WML 283 (427)
T ss_pred eeecC---CCCcEEEEEECCHHHHHHHH----------------------------HHHHhcCCCC-CHHHH-----HHH
Confidence 88863 23446688877766655441 0000011111 12111 123
Q ss_pred HhCcchHHHHHHHHHHHHHHHHHHhhcCCCeE
Q 001586 437 YHGPEGLKTIAQRVHGLAGTFALGLKKLGTVE 468 (1049)
Q Consensus 437 ~~g~~Gl~~ia~~~~~~a~~l~~~L~~~g~~~ 468 (1049)
..+.+-+....++..+++..+++.|++..+++
T Consensus 284 ~r~L~tl~~R~~~~~~~a~~la~~L~~~p~V~ 315 (427)
T PRK07049 284 GRSLETLVLRMERANRNARAVAEFLRDHPKVE 315 (427)
T ss_pred HcCCChHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 33444566666777889999999999874353
No 494
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.40 E-value=1.1e-10 Score=134.82 Aligned_cols=265 Identities=13% Similarity=0.067 Sum_probs=173.0
Q ss_pred HHHHHHHHHHHhCCCCcceEeccchHHHHHHHHHHhhhccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCc----
Q 001586 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---- 288 (1049)
Q Consensus 213 l~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a~~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~~---- 288 (1049)
..++++.+|+++|.+..++.++.|++.++..+..++ .. +||+|+++.-.++.+...++ ..|.++..++.
T Consensus 66 ~~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~~~~-~~--~gd~v~~~~p~y~~~~~~~~----~~g~~~~~~~~~~~~ 138 (359)
T PRK03158 66 APELRTKVAKHLGVDEEQLLFGAGLDEVIQMISRAL-LN--PGTNTVMAEPTFSQYRHNAI----IEGAEVREVPLKDGG 138 (359)
T ss_pred HHHHHHHHHHHhCCCHHHEEECCCHHHHHHHHHHHH-hC--CCCEEEEcCCCHHHHHHHHH----HcCCeEEEEecCCCC
Confidence 345678999999998889999999987776554443 22 78999999998888766653 35778777764
Q ss_pred ---chhhc-cCCCEeEEEEEcC-CCCeeeccHHHHHHHHHh--CCcEEEEEeccccccCCC----CC----CcccceEEE
Q 001586 289 ---KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHA--NGVKVVMATDLLALTILK----PP----GELGADIVV 353 (1049)
Q Consensus 289 ---~~l~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~--~galliV~a~~~alg~l~----~p----~~~GaDivv 353 (1049)
+++++ +++++++|++.+| |++|.+.+.++|.++++. +|++++++ +........ ++ ...+-.|++
T Consensus 139 ~d~~~l~~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~~~~~~~~~~~ii~D-e~y~~~~~~~~~~~~~~~~~~~~~vi~~ 217 (359)
T PRK03158 139 HDLEAMLKAIDEQTKIVWICNPNNPTGTYVNHEELLSFLESVPSHVLVVLD-EAYYEYVTAEDYPDTLPLLEKYENLIVL 217 (359)
T ss_pred cCHHHHHHhcCCCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEE-CchHhhcCCcccccHHHHHHhcCCEEEE
Confidence 33444 6678899999998 799999999999988887 48888884 222111110 11 123456778
Q ss_pred ecC-ccccccCCCCCCceEEEEEchhHHhcCCCceeeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHH
Q 001586 354 GSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAA 432 (1049)
Q Consensus 354 gs~-k~lg~P~~~GGP~~G~l~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irrekaTsni~t~~~l~a~~aa 432 (1049)
.|. |.|+.| |=-.||+++++++.+.+- +.+.+. +++......+++
T Consensus 218 ~S~SK~~g~~----GlRiG~~v~~~~~~~~~~----------------------------~~~~~~--~~~~~~q~~~~~ 263 (359)
T PRK03158 218 RTFSKAYGLA----ALRVGYGIASEELIEKLN----------------------------IARPPF--NTTRIAQYAAIA 263 (359)
T ss_pred EechHhhcCc----chhhehhcCCHHHHHHHH----------------------------HhcCCC--CCCHHHHHHHHH
Confidence 886 877543 112488888777765541 001111 222221111111
Q ss_pred HHHHHhCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEcCC-CCcceEEEecCC-HHHHHHHHHHcCCeeeee----cCCe
Q 001586 433 MYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL-PFFDTVKVKCAD-AHAIASAAYKIEMNLRVV----DSNT 506 (1049)
Q Consensus 433 ~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~g~~~v~~~-~~~~~v~i~~~~-~~~v~~~L~~~gI~~~~~----~~~~ 506 (1049)
+ +...+-++++.+...+..+++.+.|++.| +++... ..| +.+.++. ..++.+.|.++||.+... .++.
T Consensus 264 ~---l~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~g~~--i~~~~~~~~~~~~~~l~~~gv~v~~g~~f~~~~~ 337 (359)
T PRK03158 264 A---LEDQAFLKECVEKNAEGLEQYYAFCKEYG-LFYYPSQTNF--IFVDTGRDANELFEALLKKGYIVRSGAALGFPTG 337 (359)
T ss_pred H---hcCHHHHHHHHHHHHHHHHHHHHHHHHCC-CeeCCCcCcE--EEEECCCCHHHHHHHHHHCCeEEeeCCCCCCCCe
Confidence 1 11112245555666677778888888876 776532 222 3344443 678999999999988653 2578
Q ss_pred EEEEeccCCCHHHHHHHHHHHh
Q 001586 507 VTASFDETTTLEDVDKLFIVFA 528 (1049)
Q Consensus 507 vris~~~~~t~edid~lv~aL~ 528 (1049)
+|+++. +.+|+|+|+++|+
T Consensus 338 iRi~~~---~~~~~~~l~~al~ 356 (359)
T PRK03158 338 VRITIG---LKEQNDKIIELLK 356 (359)
T ss_pred EEEecC---CHHHHHHHHHHHH
Confidence 999977 8999999999986
No 495
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=99.40 E-value=3.7e-10 Score=131.81 Aligned_cols=269 Identities=13% Similarity=0.099 Sum_probs=164.7
Q ss_pred HHHHHHHHHh----CC--CCc-ceEeccchHHHHHHHHHHhhhccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeC
Q 001586 215 NFQTMIADLT----GL--PMS-NASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSD 287 (1049)
Q Consensus 215 e~q~~ia~L~----G~--~~~-n~sl~~~~Ta~~eA~~~a~~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~ 287 (1049)
++++.+|+++ |. +.. ++.+++|++.++..+..++ . ++||+|++++-.++.+...++ ..|++++.++
T Consensus 71 ~lr~~ia~~~~~~~~~~~~~~~~vi~t~G~~~~l~~~~~~~-~--~~gd~vlv~~P~y~~~~~~~~----~~G~~v~~v~ 143 (383)
T TIGR03540 71 AYRQAVADWYKRRFGVELDPETEVLSLIGSKEGIAHIPLAF-V--NPGDIVLVPDPGYPVYRIGTL----FAGGEPYEMP 143 (383)
T ss_pred HHHHHHHHHHHHhhCCCCCCCCeEEECCCcHHHHHHHHHHh-C--CCCCEEEEeCCCCcchHHHHH----hcCCEEEEEe
Confidence 3455556554 54 344 4777788887776655544 2 388999999999998777654 3588887766
Q ss_pred cc----------hhhc-cCCCEeEEEEEcC-CCCeeecc---HHHHHHHHHhCCcEEEEEecccc-c--cC--CCCCCc-
Q 001586 288 LK----------DIDY-KSGDVCGVLVQYP-GTEGEVLD---YGDFIKNAHANGVKVVMATDLLA-L--TI--LKPPGE- 346 (1049)
Q Consensus 288 ~~----------~l~~-l~~~t~~V~v~~p-n~~G~i~d---i~~I~~~ah~~galliV~a~~~a-l--g~--l~~p~~- 346 (1049)
.+ ++++ +.+++++|++.+| |++|.+.+ +++|+++|+++|++++++. ... + .. ..+...
T Consensus 144 ~~~~~g~~~d~~~l~~~~~~~~~~v~i~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De-~y~~l~~~~~~~~~~~~~ 222 (383)
T TIGR03540 144 LKEENGFLPDFDAIPEDIAKKAKLMFINYPNNPTGAVAPLKFFKELVEFAKEYNIIVCHDN-AYSEITFDGYKAPSFLEV 222 (383)
T ss_pred cCcccCCccCHHHHHhhccccceEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCEEEEEec-chhhhccCCCCCcCcccC
Confidence 52 2333 5678999999988 79999987 7999999999999999942 221 1 10 001111
Q ss_pred ---ccceEEEecC-ccccccCCCCCCceEEEEEchhHHhcCCCceeeeeecCCCCcceeeecccccccccccccCCCccc
Q 001586 347 ---LGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICT 422 (1049)
Q Consensus 347 ---~GaDivvgs~-k~lg~P~~~GGP~~G~l~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irrekaTsni~t 422 (1049)
..-.|+++|. |.||.| |=-.|++..++++.+.+.. .+.+...++
T Consensus 223 ~~~~~~~i~~~SfSK~~g~~----GlRiG~~i~~~~l~~~~~~----------------------------~~~~~~~~~ 270 (383)
T TIGR03540 223 DGAKDVGIEFHSLSKTYNMT----GWRIGMAVGNADLIAGLGK----------------------------VKTNVDSGV 270 (383)
T ss_pred CCcccCEEEEEecccccCCc----cceeeEEeCCHHHHHHHHH----------------------------HHHhcccCC
Confidence 1234667775 877543 1127888887777655410 000011111
Q ss_pred hhHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEcCCCCcceEEEecCC---HHHHHHHHH-HcCCe
Q 001586 423 AQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD---AHAIASAAY-KIEMN 498 (1049)
Q Consensus 423 ~~~l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~g~~~v~~~~~~~~v~i~~~~---~~~v~~~L~-~~gI~ 498 (1049)
+...- .++..+--.+.+-++++.++..++..++.+.|++.| +++..+...--+.+.++. ..++.++|. ++||.
T Consensus 271 ~~~~q--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~ll~~~gi~ 347 (383)
T TIGR03540 271 FQAIQ--YAAIAALNGPQDVVKEIRKIYQRRRDLLLEALKKIG-IDVEKPKATFYVWVPVPEGYTSAEFAARLLEETGVV 347 (383)
T ss_pred ChHHH--HHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhCC-CEecCCCcceEEEEECCCCCCHHHHHHHHHHHCCEE
Confidence 11111 111111112233456677777888899999999886 877632111113344442 678888875 67998
Q ss_pred eeee------cCCeEEEEeccCCCHHHHHHHHHHHh
Q 001586 499 LRVV------DSNTVTASFDETTTLEDVDKLFIVFA 528 (1049)
Q Consensus 499 ~~~~------~~~~vris~~~~~t~edid~lv~aL~ 528 (1049)
+... ..+.+|+++. .+.+++++.++.|+
T Consensus 348 v~~g~~f~~~~~~~~Ris~~--~~~~~l~~~l~~l~ 381 (383)
T TIGR03540 348 VTPGVGFGEYGEGYIRISLT--VPDERLEEAVARIK 381 (383)
T ss_pred EecchhhCccCCCeEEEEec--CCHHHHHHHHHHHh
Confidence 7642 1468999997 45777777777664
No 496
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=99.40 E-value=1.9e-11 Score=144.63 Aligned_cols=294 Identities=11% Similarity=0.073 Sum_probs=166.6
Q ss_pred HHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEc--CCCCCccHHHH----HhcCC------E
Q 001586 636 NLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIP--VSAHGTNPATA----AMCGM------K 703 (1049)
Q Consensus 636 el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip--~saHg~~pa~a----~~~G~------~ 703 (1049)
++.+.|++++......++.+||+++++++++.+|.|. +|.+|+.- .+.|+.+..+. ...|. .
T Consensus 92 ~la~~l~~~~p~~~~v~f~~sGseA~e~AlklAr~~t------gr~~i~~~~~~~~h~~~~~~~g~~~~~~~~~~~~~~~ 165 (431)
T PRK06209 92 DAAESFLELIDGADMVKFCKNGSDATSAAVRLARAYT------GRDLVARCADHPFFSTDDWFIGTTPMSAGIPASVSAL 165 (431)
T ss_pred HHHHHHHHhCCccceEEEecCHHHHHHHHHHHHHHHh------CCCeEEEeccCccccccccccccCCCCCCCChhHhcc
Confidence 6778888887422234778999999999999988872 34566542 33443221110 00111 0
Q ss_pred EEEEcCCCCCCCCHHHHHHHHHhcCCCeEEEEEEcCCcccccc--ccHHHHHHHHHHcCCEEEEeccccccccCcC--CC
Q 001586 704 IVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQVGLT--SP 779 (1049)
Q Consensus 704 Vv~V~~d~~g~iD~~~L~~~i~~~~~~taaV~it~Pn~~G~i~--~di~eI~~lah~~G~ll~vD~A~~~a~~gl~--~P 779 (1049)
+..++. -|+++|+++++++.+++++|+++.. .|... .++++|.++|++||+++++|+++. ++.... .-
T Consensus 166 ~~~~~~-----~d~~~l~~~l~~~~~~~aavi~Epv--~g~~~~~~~l~~l~~lc~~~g~lLI~DEv~t-G~~~~~~g~~ 237 (431)
T PRK06209 166 TVTFRY-----NDIASLEALFEDHPGRIACVILEPA--TADEPQDGFLHEVRRLCHENGALFILDEMIT-GFRWHMRGAQ 237 (431)
T ss_pred ccccCC-----CCHHHHHHHHHhCCCCEEEEEEccc--cCCCCCHHHHHHHHHHHHHcCCEEEEEcccc-cCCcCcchhh
Confidence 112222 3899999999876667888877543 23321 149999999999999999999862 221110 00
Q ss_pred --CccCCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHH
Q 001586 780 --GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISY 857 (1049)
Q Consensus 780 --g~~GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~ 857 (1049)
...-+|++++ .|.++ +|-| +|.+++++++...+.-.... ..... ...+++.|+++.++++.
T Consensus 238 ~~~gv~PDi~t~--gK~lg----gG~p-~~av~~~~~i~~~~~~~~~~---------~~~~~-~~~~T~~~np~~~aaa~ 300 (431)
T PRK06209 238 KLYGIVPDLSCF--GKALG----NGFA-VSALAGKREYMELGGLEHTD---------RERVF-LLSTTHGAETHALAAAI 300 (431)
T ss_pred HHhCCCcceeee--hhhhc----CCcc-cEEEEEHHHHHhhhcccccC---------CCCce-eeccCCCCCHHHHHHHH
Confidence 0123688766 47663 3435 55666777666541100000 00000 00112334566677788
Q ss_pred HHHHHHchhhHHHHHHHHHHHHHHHHHHHhcc---CCee--eccCCCceeeEEEEeccCccccCCCCHHHHHHHHHHCCc
Q 001586 858 TYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGF 932 (1049)
Q Consensus 858 a~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~---~~v~--~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi 932 (1049)
+.|..+..+++. ++...+.++|+++|++. +.+. ..+.......+++.+-+. ......-...+.++|.++|+
T Consensus 301 a~l~~i~~~~~~---~~~~~~g~~l~~~L~~~~~~~~~~~~vr~~G~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~Gi 376 (431)
T PRK06209 301 ATMAIYRDEDVI---ERLHEQGAKLAAGVNEAAAEHGLQDHVRVSGRPCCLTYSTLDGN-GQPSQAFRTLFLQETIRRGV 376 (431)
T ss_pred HHHHHHhccCHH---HHHHHHHHHHHHHHHHHHHhCCCCeEEEeecceEEEEEecCCcc-cCCcHHHHHHHHHHHHHCCc
Confidence 888888776643 44556677888888653 3321 112111122222221110 00000002256788889999
Q ss_pred ccCCCCCCCCCEEEEEccCCCCHHHHHHHHHHHHHHHHHHHH
Q 001586 933 HGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQ 974 (1049)
Q Consensus 933 ~~~~~~~p~~~~lri~~t~~~t~eeid~fv~aL~~i~~~i~~ 974 (1049)
.++. + +++..+|++|||+++++|.+++.++..
T Consensus 377 ~~p~--------l--~is~~ht~~dId~~l~~l~~~l~~~~~ 408 (431)
T PRK06209 377 LMPS--------L--VVSYAHGDADIERTIDAVHGALGVYRK 408 (431)
T ss_pred cccc--------c--cccccCCHHHHHHHHHHHHHHHHHHHH
Confidence 7641 2 334567999999999999999888743
No 497
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.39 E-value=6.6e-11 Score=124.34 Aligned_cols=276 Identities=20% Similarity=0.207 Sum_probs=177.8
Q ss_pred HHHHHHHHHHHHhCCCCcceEeccchHHHHHHHHHHhhhccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCcc--
Q 001586 212 SLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK-- 289 (1049)
Q Consensus 212 ~l~e~q~~ia~L~G~~~~n~sl~~~~Ta~~eA~~~a~~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~~~-- 289 (1049)
.|..|-..+++++|||. +-++.|+-.+-.|+.-++. ++||-|+++.++|-++.-. |++.|.+|..+|-.
T Consensus 62 pI~~F~~dlaeFlg~D~--~R~t~GARe~KfavMhal~---~~gd~vV~D~~aHYttyvA----AEragl~v~eVp~tg~ 132 (382)
T COG1103 62 PIKDFLEDLAEFLGMDE--VRVTAGAREAKFAVMHALC---KEGDWVVVDSLAHYTTYVA----AERAGLNVAEVPNTGY 132 (382)
T ss_pred cHHHHHHHHHHHhCCce--eeecccchhhHHHHHHHhc---cCCCEEEEcCcchHHHHHH----HHhcCCeEEecCCCCC
Confidence 35667778999999998 5567788766666554553 3889999999999776655 45678999888731
Q ss_pred ------------hhhc----cCCCEeEEEEEcCC-CCeeeccHHHHHHHHHhCCcEEEE-EeccccccCC-CCCCcccce
Q 001586 290 ------------DIDY----KSGDVCGVLVQYPG-TEGEVLDYGDFIKNAHANGVKVVM-ATDLLALTIL-KPPGELGAD 350 (1049)
Q Consensus 290 ------------~l~~----l~~~t~~V~v~~pn-~~G~i~di~~I~~~ah~~galliV-~a~~~alg~l-~~p~~~GaD 350 (1049)
-+++ -++.+.+.++++|+ .+|.+.|.+.++++||++|+++++ ++- ..|-+ .+-.+.|||
T Consensus 133 Pey~i~~e~y~~viee~~~~~g~~~~lallTh~Dg~YGNl~Dakkva~ic~e~gvPlllN~AY--t~Grmpvs~ke~g~D 210 (382)
T COG1103 133 PEYKITPEGYAEVIEEVKDEGGDPPALALLTHVDGEYGNLADAKKVAKICREYGVPLLLNCAY--TVGRMPVSGKEIGAD 210 (382)
T ss_pred CceEecHHHHHHHHHHHHhccCCCceEEEEeccCCCcCCchhhHHHHHHHHHcCCceEeecce--eeccccccccccCCC
Confidence 1222 12447788899994 799999999999999999999999 332 44433 345789999
Q ss_pred EEEecC-ccccccCCCCCCceEEEEEchhHHhcCCCceeeeeecCCCCcceeeecccccccccccccCCCccchh--HHH
Q 001586 351 IVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQ--ALL 427 (1049)
Q Consensus 351 ivvgs~-k~lg~P~~~GGP~~G~l~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irrekaTsni~t~~--~l~ 427 (1049)
++|+|+ |++.. .|| .|++++++++.+.+- |.- |+. |. ..|- ----||.. ++.
T Consensus 211 FiVgSGHKsmAA----s~P-iGvl~~~eE~ae~V~-r~S-------g~~-~~----------~KEv-ellGCT~rGapiv 265 (382)
T COG1103 211 FIVGSGHKSMAA----SAP-IGVLAMSEEWAEIVL-RRS-------GRA-FP----------KKEV-ELLGCTVRGAPIV 265 (382)
T ss_pred EEEecCccchhc----cCC-eeEEeehhHHHHHHH-hhc-------ccc-cc----------ccee-eeecccccCchHH
Confidence 999999 77743 232 689999988765431 111 110 10 0010 01235543 344
Q ss_pred HHHHHH-HHHHhCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEcCC-CCc-ceEEEecCCHHHHHHHHHHcCCeee----
Q 001586 428 ANMAAM-YAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL-PFF-DTVKVKCADAHAIASAAYKIEMNLR---- 500 (1049)
Q Consensus 428 a~~aa~-y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~g~~~v~~~-~~~-~~v~i~~~~~~~v~~~L~~~gI~~~---- 500 (1049)
-+||+. +. .+-. ..+....++|+++.++|+++||++.++. |.- +-+.|..|.-.+|++.-..+|+++.
T Consensus 266 TlmASfP~V----~eRV-krWdeEv~kaR~fv~elEkigg~~qlG~rPk~HdLm~Fetp~f~eIakk~~r~gyFlY~ELK 340 (382)
T COG1103 266 TLMASFPHV----VERV-KRWDEEVEKARWFVAELEKIGGVKQLGERPKNHDLMKFETPVFHEIAKKHKRKGYFLYEELK 340 (382)
T ss_pred HHHhcCHHH----HHHH-HHHHHHHHHHHHHHHHHHHhhhHHHhCCCCcccceeeecCchHHHHHHhCcCCceeeHHHHH
Confidence 566654 11 1111 2344567899999999999987887753 433 3355555544455555444455431
Q ss_pred --------eecCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001586 501 --------VVDSNTVTASFDETTTLEDVDKLFIVFAG 529 (1049)
Q Consensus 501 --------~~~~~~vris~~~~~t~edid~lv~aL~~ 529 (1049)
.--...+-+| .+.-+.|+++..+++|+.
T Consensus 341 ~RgI~GI~~G~Tk~~K~s-vyGl~~Eqve~V~~afke 376 (382)
T COG1103 341 KRGIHGIQPGQTKYFKLS-VYGLSWEQVEYVVDAFKE 376 (382)
T ss_pred hcCccccccCceeEEEEE-eecCCHHHHHHHHHHHHH
Confidence 1011234454 345689999999999963
No 498
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.39 E-value=6.6e-12 Score=133.54 Aligned_cols=285 Identities=17% Similarity=0.190 Sum_probs=180.5
Q ss_pred HHHHHHHHhhCCCccccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHH---HHHhcCCEEEEEcCCCC
Q 001586 636 NLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA---TAAMCGMKIVSVGTDAK 712 (1049)
Q Consensus 636 el~~~la~l~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa---~a~~~G~~Vv~V~~d~~ 712 (1049)
++++.+++++|-+.. ++..||+.|+ +++|+..-.. ++.+||+.+-+|-.... ++.+.|+.++.|...+|
T Consensus 60 rLE~~vA~l~GKEAg-LFv~SGTmgN---llaIm~Hc~~----rg~eii~gd~~HI~~~E~gg~s~l~gv~~~tv~~e~d 131 (384)
T KOG1368|consen 60 RLEQRVAELFGKEAG-LFVPSGTMGN---LLAIMVHCHQ----RGSEIIVGDRAHIHRYEQGGISQLAGVHVRTVKNEND 131 (384)
T ss_pred HHHHHHHHHhCccce-eeeccccccc---HHHHHHHhcC----CCceEEeccchheeehhccChhhhccceeEeeeeCCC
Confidence 677889999998775 5667888888 4555543222 45689998888854332 46778999999998889
Q ss_pred CCCCHHHHHHHHHh-----cCCCeEEEEEEcC-Cccc-ccc--ccHHHHHHHHHHcCCEEEEecccc-ccccCcCCCC-c
Q 001586 713 GNINIEELRKAAEA-----NRDNLSTLMVTYP-STHG-VYE--EGIDEICKIIHDNGGQVYMDGANM-NAQVGLTSPG-Y 781 (1049)
Q Consensus 713 g~iD~~~L~~~i~~-----~~~~taaV~it~P-n~~G-~i~--~di~eI~~lah~~G~ll~vD~A~~-~a~~gl~~Pg-~ 781 (1049)
|.+|++++|+++.- |.+-|++|++++- ++.| .+- +.+.+|.++|+++|+.||+|||.. ++.+.+..|- +
T Consensus 132 gtm~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~Gg~vlPle~~~~v~~lak~~glkLH~DGARi~NAavasgV~vk~ 211 (384)
T KOG1368|consen 132 GTMDLEDIEAAIRVPKGDCHMPPTKLICLENTHNNCGGKVLPLEELDRVKALAKRHGLKLHMDGARIFNAAVASGVPVKK 211 (384)
T ss_pred CeeeHHHHHHhhcCCCCCccCCCceEEEeeccccccCceEeeHHHHHHHHHHHhccCCeeecchhhhhhHHHHcCCCHHH
Confidence 99999999999963 2356999999886 3445 443 246778889999999999999852 3333333332 1
Q ss_pred c--CCcEEEeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCC-CCCCccchhhHHHHHHHHH
Q 001586 782 I--GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPL-GTIAAAPWGSALILPISYT 858 (1049)
Q Consensus 782 ~--GaDi~~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t-~~i~sa~~g~~~~~~~a~a 858 (1049)
+ -+|.+...+.|.++.| -..+++.++++..+.. + ..|+. +++. |.++++++
T Consensus 212 i~~~fDSVsiCLSKglgAP------VGSViVG~k~FI~kA~------------~-~RKalGGGmR-----QsGvLaaa-- 265 (384)
T KOG1368|consen 212 ICSAFDSVSICLSKGLGAP------VGSVIVGSKDFIDKAR------------H-FRKALGGGMR-----QSGVLAAA-- 265 (384)
T ss_pred HHHhhhhhhhhhhccCCCC------cccEEEccHHHHHHHH------------H-HHHHhcCchh-----HHHHHHHH--
Confidence 1 4687777778877544 3345555555544311 0 01111 2222 22333222
Q ss_pred HHHHHchhhHHHHHHHHHHHHHHHHHHHhcc--CCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHHHCCcccCC
Q 001586 859 YIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPT 936 (1049)
Q Consensus 859 ~l~~lG~eGl~~~~~~~~~~a~yL~~~L~~~--~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~ 936 (1049)
.+-.+. +.+. ..+...+.|+.|++.++.. +++..+. ...+.+.+.+. ..+++++++.+.|.++|+.+-+
T Consensus 266 aLval~-~~~~-~L~~dHk~A~~lAe~~~~~~~i~v~v~a---~etNiv~~~l~----q~~~~~~~l~~~~~k~gi~lm~ 336 (384)
T KOG1368|consen 266 ALVALD-ENVP-LLRADHKRAKELAEYINTPEEIRVEVPA---VETNIVNMVLC----QARLTAEELCKFLEKNGILLMG 336 (384)
T ss_pred HHHHhh-cchH-HHHHHHHHHHHHHHHhccccceeeecch---hhcceeeeecc----cccCCHHHHHHHHHHCCeEEee
Confidence 122222 2333 3344556777888887754 3332111 01111112211 2367899999999999998642
Q ss_pred CCCCCCCEEEEEccCCCCHHHHHHHHHHHH
Q 001586 937 MSWPVPGTLMIEPTESESKEELDRYCDALI 966 (1049)
Q Consensus 937 ~~~p~~~~lri~~t~~~t~eeid~fv~aL~ 966 (1049)
-. ...+|+.++...|.++++..+..+.
T Consensus 337 ~~---s~r~Rivlh~Qvt~~~ve~~~~~~~ 363 (384)
T KOG1368|consen 337 GA---SRRIRIVLHHQVTDEDVEYVKSVLS 363 (384)
T ss_pred cc---ccceEEEEEEecCHHHHHHHHHHHH
Confidence 21 2458999999999999999999884
No 499
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=99.38 E-value=7.4e-11 Score=135.43 Aligned_cols=272 Identities=16% Similarity=0.125 Sum_probs=163.1
Q ss_pred HHHHHHHHHhhCCCc-cccccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhcCCEEEEEcCCCCC
Q 001586 635 NNLGEWLCTITGFDS-FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKG 713 (1049)
Q Consensus 635 ~el~~~la~l~G~~~-~~l~~~sGa~ge~a~l~air~y~~~~G~~~r~~VLip~saHg~~pa~a~~~G~~Vv~V~~d~~g 713 (1049)
.++++.+++.+|.+. ..+..++|++.....+ .+.+ .+++ |+++......+...+++.|++++.++.+.
T Consensus 56 ~~L~~~ia~~~~~~~~~~I~i~~Gs~e~i~~l--~~~~------~~g~-v~v~~P~y~~y~~~~~~~g~~~~~v~~~~-- 124 (339)
T PRK06959 56 DGLAACAARYYGAPDAAHVLPVAGSQAAIRAL--PALL------PRGR-VGIAPLAYSEYAPAFARHGHRVVPLDEAA-- 124 (339)
T ss_pred HHHHHHHHHHhCCCCcccEEECcCHHHHHHHH--HHhc------CCCe-EEEcCCCcHHHHHHHHHCCCEEEeecccc--
Confidence 378899999999964 4566666655222222 2221 1344 77776544444455788999999988743
Q ss_pred CCCHHHHHHHHHhcCCCeEEEEEEcCC-cccccc--ccHHHHHHHHHHcCCEEEEeccccccccCcCCCCcc-CCc--EE
Q 001586 714 NINIEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI-GAD--VC 787 (1049)
Q Consensus 714 ~iD~~~L~~~i~~~~~~taaV~it~Pn-~~G~i~--~di~eI~~lah~~G~ll~vD~A~~~a~~gl~~Pg~~-GaD--i~ 787 (1049)
+. +. +.++++++++|| .+|.+- ..+++|++.|.+++.++++|.++.. +....+.... ..+ ++
T Consensus 125 ----~~----~~---~~~~~v~l~nPnNPTG~~~s~~~l~~l~~~~~~~~~~vI~DEay~~-~~~~~s~~~~~~~~~vi~ 192 (339)
T PRK06959 125 ----DT----LP---AALTHLIVVNPNNPTAERLPAARLLRWHAQLAARGGTLIVDEAFAD-TLPAASLAAHTDRPGLVV 192 (339)
T ss_pred ----hh----cc---ccCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEECCCcc-CCCcccchhccCCCCEEE
Confidence 22 22 345678999995 599875 1355555556778999999998542 1110010111 112 55
Q ss_pred EeCCCcccccCCCCCCCceeEEEEcccccccCCCCccccCCCCCCCCCCCCCCCCCccchhhHHHHHHHHHHHHHHchhh
Q 001586 788 HLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (1049)
Q Consensus 788 ~~s~hK~f~~P~g~GGPg~G~i~~~~~l~~~lpg~~vg~t~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eG 867 (1049)
+.++.|.|++ .|-++|++++++++.+.+... ...-++++ ....++.+++. ...
T Consensus 193 l~SfSK~~gl----~GlRiGy~v~~~~li~~l~~~--------------~~~~~vs~------~~q~a~~~~L~---~~~ 245 (339)
T PRK06959 193 LRSVGKFFGL----AGVRAGFVLAAPALLAALRDA--------------LGAWTVSG------PARHAVRAAFA---DAA 245 (339)
T ss_pred EecChhhcCC----cchheEEEecCHHHHHHHHHh--------------cCCCCCcH------HHHHHHHHHhC---cHH
Confidence 6667777754 478899999987766554210 00011221 11122233332 222
Q ss_pred H-HHHHHHHHHHHHHHHHHHhcc-CCeeeccCCCceeeEEEEeccCccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEE
Q 001586 868 L-TEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTL 945 (1049)
Q Consensus 868 l-~~~~~~~~~~a~yL~~~L~~~-~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~~v~k~L~~~Gi~~~~~~~p~~~~l 945 (1049)
+ ++..+...+..+++.+.|+++ +.+. . +..+ +.++++ +..++.+.|.++||.+... +..+++
T Consensus 246 ~~~~~~~~~~~~r~~l~~~L~~~g~~~~-~---~~~f--~~~~~~--------~~~~l~~~l~~~GI~vr~~--~~~~~l 309 (339)
T PRK06959 246 WQAAMRERLAADGARLAALLRAHGFAVH-A---TPLF--SWTDDP--------RAAALHAALARRGIWTRYF--APPPSV 309 (339)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCcc-C---cceE--EEEeCC--------CHHHHHHHHHhCCeEEEEC--CCCCeE
Confidence 3 334455556778899999875 3332 1 1111 234432 4578999999999998643 334799
Q ss_pred EEEccCCCCHHHHHHHHHHHHHHHHHHHH
Q 001586 946 MIEPTESESKEELDRYCDALISIREEIAQ 974 (1049)
Q Consensus 946 ri~~t~~~t~eeid~fv~aL~~i~~~i~~ 974 (1049)
||+++ .+.+|+++|+++|+++.+.+..
T Consensus 310 Risi~--~~~~e~~~l~~al~~~~~~~~~ 336 (339)
T PRK06959 310 RFGLP--ADEAEWQRLEDALAECVPTLAA 336 (339)
T ss_pred EEECC--CCHHHHHHHHHHHHHHHHHHhh
Confidence 99974 3568999999999998877653
No 500
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=99.38 E-value=3.7e-10 Score=130.89 Aligned_cols=254 Identities=12% Similarity=0.072 Sum_probs=160.6
Q ss_pred CCCcceEeccchHHHHHHHHHHhhhccCCCCEEEEcCCCCHHHHHHHHHhhcCCCeEEEEeCcchhhcc-CCCEeEEEEE
Q 001586 226 LPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKDIDYK-SGDVCGVLVQ 304 (1049)
Q Consensus 226 ~~~~n~sl~~~~Ta~~eA~~~a~~~~~~~g~~Vlv~~~~Hps~~~~l~~~a~~~gi~v~~v~~~~l~~l-~~~t~~V~v~ 304 (1049)
.++.++.+++|++.++..+..++... +||+|++++-.|+.+...++ ..|++++.++ +++.+ .+++++|++.
T Consensus 84 ~~~~~I~it~G~~~~i~~~~~~l~~~--~gd~Vl~~~p~y~~~~~~~~----~~g~~~~~~~--~~~~l~~~~~~~v~~~ 155 (364)
T PRK07865 84 LDPAAVLPVIGSKELVAWLPTLLGLG--PGDVVVIPELAYPTYEVGAR----LAGATVVRAD--SLTELGPQRPALIWLN 155 (364)
T ss_pred CCcccEEEccChHHHHHHHHHHHcCC--CCCEEEECCCCcccHHHHHH----hcCCEEEecC--ChhhCCcccceEEEEc
Confidence 55678999999997776544443223 88999999999998877764 3588887775 33333 3578899998
Q ss_pred cC-CCCeeecc---HHHHHHHHHhCCcEEEEEeccccccCCC--CCC---------cccceEEEecC-ccccccCCCCCC
Q 001586 305 YP-GTEGEVLD---YGDFIKNAHANGVKVVMATDLLALTILK--PPG---------ELGADIVVGSA-QRFGVPMGYGGP 368 (1049)
Q Consensus 305 ~p-n~~G~i~d---i~~I~~~ah~~galliV~a~~~alg~l~--~p~---------~~GaDivvgs~-k~lg~P~~~GGP 368 (1049)
+| |++|.+.+ +++|.++|+++|++++++. ..+.-... .+. +..-.|+++|. |.|+.| |-
T Consensus 156 ~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De-~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~----Gl 230 (364)
T PRK07865 156 SPSNPTGRVLGVDHLRKVVAWARERGAVVASDE-CYLELGWDAEPVSILDPRVCGGDHTGLLAVHSLSKQSNLA----GY 230 (364)
T ss_pred CCCCCCCccCCHHHHHHHHHHHHHcCCEEEEec-chhhhccCCCCCccccccccCCccceEEEEeechhccCCC----ce
Confidence 88 79998854 6889999999999999942 22210100 011 11223778886 888643 22
Q ss_pred ceEEEEEchhHHhcCCCceeeeeecCCCCcceeeecccccccccccccCCCccchhHHHHHHHHHHHHHhCcchHHHHHH
Q 001586 369 HAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQ 448 (1049)
Q Consensus 369 ~~G~l~~~~~l~~~lpgrivG~s~d~~g~~~~~l~lqtreq~irrekaTsni~t~~~l~a~~aa~y~~~~g~~Gl~~ia~ 448 (1049)
-.|++.+.+++.+.+- +.+...+.|++......++.+ +...+-+++..+
T Consensus 231 RiG~i~~~~~~~~~~~----------------------------~~~~~~~~~~~~~~q~~~~~~---l~~~~~~~~~~~ 279 (364)
T PRK07865 231 RAGFVAGDPALVAELL----------------------------EVRKHAGMMVPAPVQAAMVAA---LGDDAHVREQRE 279 (364)
T ss_pred eeEEEecCHHHHHHHH----------------------------HHHHhcCCCcCHHHHHHHHHH---hCCHHHHHHHHH
Confidence 4688887777665441 001111222222222222221 111233556666
Q ss_pred HHHHHHHHHHHHhhcCCCeEEcCC--CCcceEEEecCC-HHHHHHHHHHcCCeeeee------cCCeEEEEeccCCCHHH
Q 001586 449 RVHGLAGTFALGLKKLGTVEVQGL--PFFDTVKVKCAD-AHAIASAAYKIEMNLRVV------DSNTVTASFDETTTLED 519 (1049)
Q Consensus 449 ~~~~~a~~l~~~L~~~g~~~v~~~--~~~~~v~i~~~~-~~~v~~~L~~~gI~~~~~------~~~~vris~~~~~t~ed 519 (1049)
+..++.+++.+.|++.| +.+..+ .++ +.+..+. ..++.+.|.++||.+... .++.+|+++.. ++++
T Consensus 280 ~~~~~~~~l~~~L~~~g-~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~gv~v~pg~~f~~~~~~~iRi~~~~--~~~~ 354 (364)
T PRK07865 280 RYARRRAVLRPALEAAG-FRVDHSEAGLY--LWATRGEDCWDTVAWLAERGILVAPGDFYGPAGAQHVRVALTA--TDER 354 (364)
T ss_pred HHHHHHHHHHHHHHHcC-CcccCCCccEE--EEEeCCCCHHHHHHHHHHCCEEEeCccccCcCCCCEEEEEecC--CHHH
Confidence 77788888999998876 765432 112 2333333 667888899999987431 24689999975 6899
Q ss_pred HHHHHHHHh
Q 001586 520 VDKLFIVFA 528 (1049)
Q Consensus 520 id~lv~aL~ 528 (1049)
+++.++.|+
T Consensus 355 ~~~~~~~l~ 363 (364)
T PRK07865 355 IAAAVERLA 363 (364)
T ss_pred HHHHHHHhh
Confidence 999998875
Done!