Query 001586
Match_columns 1049
No_of_seqs 634 out of 5237
Neff 7.2
Searched_HMMs 29240
Date Wed Mar 27 01:04:09 2013
Command hhsearch -i /local_scratch/syshi/lefta3m3/001586.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H3_1-1//hhsearch_pdb/001586hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1wyu_A Glycine dehydrogenase ( 1.0 1 1 529.5 43.3 420 100-528 1-434 (438)
2 1wyu_B Glycine dehydrogenase s 1.0 1 1 408.4 39.3 423 547-999 29-457 (474)
3 1wyu_B Glycine dehydrogenase s 1.0 1 1 326.3 37.3 374 129-529 29-436 (474)
4 1wyu_A Glycine dehydrogenase ( 1.0 1 1 314.5 38.5 407 513-969 4-437 (438)
5 3mc6_A Sphingosine-1-phosphate 1.0 1 1 285.7 31.6 421 559-1011 36-477 (497)
6 3mad_A Sphingosine-1-phosphate 1.0 1 1 259.9 34.5 418 558-1010 68-504 (514)
7 2dgk_A GAD-beta, GADB, glutama 1.0 1 1 245.8 36.2 383 560-974 17-436 (452)
8 3mc6_A Sphingosine-1-phosphate 1.0 1 1 241.9 33.4 388 103-529 3-432 (497)
9 2jis_A Cysteine sulfinic acid 1.0 1 1 240.1 27.0 399 549-970 71-513 (515)
10 3vp6_A Glutamate decarboxylase 1.0 1 1 236.4 29.4 389 559-971 67-504 (511)
No 1
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=1.00 E-value=1 Score=529.53 Aligned_cols=420 Identities=34% Similarity=0.528 Sum_probs=382.2
Q ss_pred CCCCCCCHHHHHHHHHHHCCCCHHHHHHCCCCCCC-CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC-CCCCCCCCCCC
Q ss_conf 46899999999999988099998876520299621-12788988889899999999999998617973-32014998899
Q 001586 100 RRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSI-RIDSMKFSKFDEGLTESQMIEHMQKLASMNKV-YKSFIGMGYYN 177 (1049)
Q Consensus 100 ~~~~~~~~~~~~~ml~~~g~~~~~~l~~~~ip~~~-~~~~~~l~~~~~~~~E~e~~~~~~~la~~n~~-~~~~lG~g~~~ 177 (1049)
.+|||||++|+++||++||++|+||||++ ||+++ ++ +++|| +++||.++++++..++++|.. +.+|+|.|+|+
T Consensus 1 ~~~~~~~~~~~~~ml~~~g~~~~~~~~~~-~p~~~~~~-~~~lp---~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~ 75 (438)
T 1wyu_A 1 MDYTPHTEEEIREMLRRVGAASLEDLFAH-LPKEILSP-PIDLP---EPLPEWKVLEELRRLAAQNLPAHKAFLGGGVRS 75 (438)
T ss_dssp CCCCCCCHHHHHHHHHHHTCSSTGGGGTT-SCGGGSSC-CCCCC---CCCCHHHHHHHHHHHHHTSCCCTTCCCCSSCCC
T ss_pred CCCCCCCHHHHHHHHHHCCCCCHHHHHHH-CCHHHHCC-CCCCC---CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
T ss_conf 99899299999999997499988999885-85987458-78989---998999999999999843767651106777658
Q ss_pred CCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHCCCCCCE
Q ss_conf 98909989988829964323598815675149999999999999870999752675156289999999983120599988
Q 001586 178 THVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKT 257 (1049)
Q Consensus 178 ~~~p~~i~~~~~~~~~~~t~ytpyq~e~sqG~le~l~e~q~~ia~L~G~~~an~sl~d~~Ta~~ea~~la~~~~~~~~~~ 257 (1049)
+..|.++ ++++++++|++.|+||||+++||+++.+.++|+++++++|++.+++++++|+|+++|++.++.++. ++++
T Consensus 76 ~~~p~~v-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~~~~~i~~~~g~taa~ea~~~a~~~~--~gd~ 152 (438)
T 1wyu_A 76 HHVPPVV-QALAARGEFLTAYTPYQPEVSQGVLQATFEYQTMIAELAGLEIANASMYDGATALAEGVLLALRET--GRMG 152 (438)
T ss_dssp CCCCHHH-HHHHTSHHHHHCCSCCSGGGCHHHHHHHHHHHHHHHHHHTSSEECSCBSSHHHHHHHHHHHHHHHH--TCCE
T ss_pred CCCCHHH-HHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHCC--CCCE
T ss_conf 7182899-998746312314787760656449999999999999985998325688372789999999997607--9998
Q ss_pred EEECCCCCHHHHHHHHHHHCCCCEEEEEECCCH----HHCCCCCEEEEEEECCCCCEEECCHHHHHHHHHHCCCEEEEEE
Q ss_conf 999299987899999985337991999927300----1034999769999849998245367999999986796999992
Q 001586 258 FIIASNCHPQTIDICITRADGFDIKVVVSDLKD----IDYKSGDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMAT 333 (1049)
Q Consensus 258 viv~~~~Hps~~~~~~~~a~~~gi~v~~i~~~~----l~~l~~~t~~V~v~~pn~~G~i~di~~I~~~ah~~gal~iV~a 333 (1049)
|+++...|+++..+++.+++..|++++.++.++ +++++++|++|++++||.+|.+.|+++|+++||++|++++|++
T Consensus 153 Viv~~~~h~s~~~~~~~~a~~~G~~v~~v~~~~~~~d~~~i~~~t~~v~i~~pn~tG~~~~l~~i~~la~~~g~~vivd~ 232 (438)
T 1wyu_A 153 VLVSQGVHPEYRAVLRAYLEAVGAKLLTLPLEGGRTPLPEVGEEVGAVVVQNPNFLGALEDLGPFAEAAHGAGALFVAVA 232 (438)
T ss_dssp EEEETTSCHHHHHHHHHHHHHTTCEEEEECCBTTBCCCCCCCTTEEEEEEESSCTTSBCCCHHHHHHHHHHTTCEEEEEC
T ss_pred EEECCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHCCCEEEEEEECCCCCEEEECHHHHHHHHHHCCCEEEEEE
T ss_conf 99848658768999999998779789998676786688991887389999879987277029999999998599899986
Q ss_pred CCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEECHHHHHCCCCCEEEEEECCCCCCCEEEECCCCCCCCCC
Q ss_conf 56663578999865530999067433544788997068999726677309992333423189984216641222211000
Q 001586 334 DLLALTILKPPGELGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRR 413 (1049)
Q Consensus 334 ~~~al~~l~~pg~~GaDivvgs~k~lg~P~~~GGP~~Gfl~~~~~l~~~lpgrlvG~s~d~~g~~~~~l~lqtreqhirR 413 (1049)
|..+++.+..++++|+|++++++|+|+.|+++|||++||+++++++.+++|++++|.+.|..|.++|.+++|+|+||+||
T Consensus 233 d~~a~g~~~~~~~~g~D~~~~s~kk~~~~~~~~Gp~~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~l~~~~~~~r~ 312 (438)
T 1wyu_A 233 DPLSLGVLKPPGAYGADIAVGDGQSLGLPMGFGGPHFGFLATKKAFVRQLPGRLVSETVDVEGRRGFILTLQAREQYIRR 312 (438)
T ss_dssp CTTGGGTBCCHHHHTCSEEEEECTTTTCCCGGGCSCCEEEEECGGGGGGCCSCCEEEEEBTTSCEEEEECCGGGSHHHHG
T ss_pred CHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEECHHHHHHCCCCEECCCCCCCCCCCEEEECCCCCCCCCH
T ss_conf 46541075897647998899778646788668998766789769999749986322223568874325632666553201
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCC-CCEEECCC-CCCCEEEEECCC-HHHHHH
Q ss_conf 246877430468999999999998091109999999999999999996139-98697499-975569994399-999999
Q 001586 414 DKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKL-GTVEVQGL-PFFDTVKVKCAD-AHAIAS 490 (1049)
Q Consensus 414 ekaTsnict~~al~a~~aa~y~~~lg~~Gl~~ia~~~~~~a~~l~~~L~~~-G~~~v~~~-~~~~~v~i~~~~-~~~v~~ 490 (1049)
+++|+|+||++.+.++.+++|+.+++++|++++.++..++++++.++|+++ | +++..+ +++..+.+..+. ..++.+
T Consensus 313 ~~~t~~~~~~~~~~a~~aa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (438)
T 1wyu_A 313 AKAKSNITTNAQLTALMGAMYLAALGPEGLREVALKSVEMAHKLHALLLEVPG-VRPFTPKPFFNEFALALPKDPEAVRR 391 (438)
T ss_dssp GGSSCCCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTT-CEECSCSSBCSEEEEECSSCHHHHHH
T ss_pred HCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCC-EEECCCCCEEEEEEEECCCCHHHHHH
T ss_conf 12567734219999999999999968888999999999999999999762898-68778998378999957999999999
Q ss_pred HHHHCCCEE--EEE---CCCEEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 999869702--000---59949999426899999999999993
Q 001586 491 AAYKIEMNL--RVV---DSNTVTASFDETTTLEDVDKLFIVFA 528 (1049)
Q Consensus 491 ~L~~~Gi~~--~~~---~~~~iris~~e~~t~edid~li~~l~ 528 (1049)
+|.++||.+ +.. .++.+|+|+++++|++|+|+++++|+
T Consensus 392 ~L~~~gi~v~~~~~~~~~~~~lRis~~~~~t~edi~~~~~~l~ 434 (438)
T 1wyu_A 392 ALAERGFHGATPVPREYGENLALFAATELHEEEDLLALREALK 434 (438)
T ss_dssp HHHHTTCCCCEECCTTSCSSEEEEECCTTCCHHHHHHHHHHHH
T ss_pred HHHHCCCEECCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHH
T ss_conf 9997895652456624389969999514689999999999999
No 2
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=1.00 E-value=1 Score=408.45 Aligned_cols=423 Identities=39% Similarity=0.695 Sum_probs=340.7
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf 39997557899889953477789999999999993063576744335423003676211103335746656799991222
Q 001586 547 AIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQ 626 (1049)
Q Consensus 547 ~~p~~~~~~~~~~~~p~~~~~~se~ei~~~l~~l~~~d~~~~~~~i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~ 626 (1049)
.||++++|++++ ++| ++||.++++++++++++|.++.++++++|+|+++.++.+......+ |.++|||++.+.
T Consensus 29 ~~p~~~~~~~~~-~lp----~~~e~~~~~~~~~l~~~~~~~~~~~~~lg~~~~~~~p~v~~~~~~~--~~~~~~~~~~~~ 101 (474)
T 1wyu_B 29 LIPKEHLREVPP-RLP----EVDELTLVRHYTGLSRRQVGVDTTFYPLGSCTMKYNPKLHEEAARL--FADLHPYQDPRT 101 (474)
T ss_dssp HSCGGGBCSSCC-CCC----CCCHHHHHHHHHHHHTTCCCTTTSCCCBTTTCCCCCCHHHHHHHHT--TSSCCTTSCGGG
T ss_pred CCCHHHHCCCCC-CCC----CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH--HHHCCCCCCHHH
T ss_conf 399888406899-999----9899999999999983787866586226203322798999999999--973288995245
Q ss_pred HHCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC-CCCCEEEECCCCCCCCHHHHHHCCCEEE
Q ss_conf 111899999999999976299912002591699999999999999996099-9998999949998764988876597999
Q 001586 627 AQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGD-HHRNVCIIPVSAHGTNPATAAMCGMKIV 705 (1049)
Q Consensus 627 ~~G~~~~~~el~~~lael~G~~~~~l~~~sGa~ge~a~l~air~y~~~~G~-~~r~~ILip~saHgt~pa~a~~~G~~Vv 705 (1049)
++|..+++.++++++++++|++...+++++|+++++.++++++.|+..+|+ .++++||++.++|+++...+.+.|++++
T Consensus 102 ~~g~~~l~~~l~~~la~~~g~~~~~~~~~ggt~a~~~al~~~~~~~~~~Gd~~~r~~Vlv~~~~h~~~~~~~~~~G~~vv 181 (474)
T 1wyu_B 102 AQGALRLMWELGEYLKALTGMDAITLEPAAGAHGELTGILIIRAYHEDRGEGRTRRVVLVPDSAHGSNPATASMAGYQVR 181 (474)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCSEEECCCSSHHHHHHHHHHHHHHHHHHTTCTTTCCEEEEETTSCTHHHHHHHHTTCEEE
T ss_pred CHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHCCCEEE
T ss_conf 86999999999999999978996365181799999999999999998547766899899958747346999998798899
Q ss_pred EECCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCC
Q ss_conf 99189999989999999988059984899998489630013368999999998099999966563222476798766775
Q 001586 706 SVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGAD 785 (1049)
Q Consensus 706 ~V~~d~~g~iDle~L~~~i~k~~~~ta~Vvit~Ps~~G~i~~dI~eIa~ia~~~G~~l~vD~A~~~a~~gl~~Pg~~GaD 785 (1049)
.+++++++.+|+++|+++++ +++++|++++||++|.+..++++|+++||++|+++++|+++.....+...++++|+|
T Consensus 182 ~v~~~~~~~~d~~~L~~~i~---~~t~~v~~~~pn~~G~~~~~l~~i~~l~~~~g~~li~Dea~~~~~~g~~~~~~~g~d 258 (474)
T 1wyu_B 182 EIPSGPEGEVDLEALKRELG---PHVAALMLTNPNTLGLFERRILEISRLCKEAGVQLYYDGANLNAIMGWARPGDMGFD 258 (474)
T ss_dssp EECBCTTSSBCHHHHHHHCS---TTEEEEEECSSCTTSCCCTTHHHHHHHHHHHTCEEEEEGGGGGGTTTTCCHHHHTCS
T ss_pred EECCCCCCCCCHHHHHHHHC---CCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEECCHHHHHCCCCCCCCCCCC
T ss_conf 94579999809999997627---884699998999873107789999999998499899967404533367786657874
Q ss_pred EEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 998189742356788888950577774332364999964347899--998878888887841013478999999999997
Q 001586 786 VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGI--PAPEKSQPLGTIAAAPWGSALILPISYTYIAMM 863 (1049)
Q Consensus 786 iv~~s~hKtl~~p~g~GGPg~G~i~~~~~l~~~lp~~~vg~~~~~--~~~~~~~~~~~i~sa~~g~~~~l~~a~a~l~~l 863 (1049)
++++|+||+|+.|+|+||||+|++++++++.++++++.++..... ....++.......+ +.++...+.++|+++..+
T Consensus 259 i~~~s~~K~~~~p~g~gG~~~G~~~~~~~l~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~aa~~~l~~~ 337 (474)
T 1wyu_B 259 VVHLNLHKTFTVPHGGGGPGSGPVGVKAHLAPYLPVPLVERGEEGFYLDFDRPKSIGRVRS-FYGNFLALVRAWAYIRTL 337 (474)
T ss_dssp EEECCTTTTTCCCCTTSCCCCCCEEECGGGGGGCCSCEEEECSSCEEEECCCTTCCCCSSS-TTSCHHHHHHHHHHHHHH
T ss_pred EEEEECCCCCCCCCCCCCCCEEEEEECHHHHHHCCCCEEECCCCEEEECCCCCCCCCCCCC-CCCCHHHHHHHHHHHHHH
T ss_conf 8998173154467878999867999727889768987650468724752557666762415-768599999999999997
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHCC-CCEEECCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCC--
Q ss_conf 64229999999999999999998400-990012688840148999656753458999999999999789604788889--
Q 001586 864 GSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWP-- 940 (1049)
Q Consensus 864 G~eGl~~~~~~~~~~a~~L~~~L~~~-~~i~~~g~~~~~~~e~iv~~~~~~~~~gi~~~~iak~L~~~Gi~~~~~~~p-- 940 (1049)
|.+++++..++..++++++.++|+++ +++.+. +..+++++++++ .+.+..+++++|.++||++++..||
T Consensus 338 g~~~l~~~~~~~~~~~~~l~~~L~~~g~~~~~~---~~~~~~~~~~~~-----~~~~~~~l~~~L~~~Gi~~~~~~~~~~ 409 (474)
T 1wyu_B 338 GLEGLKKAAALAVLNARYLKELLKEKGYRVPYD---GPSMHEFVAQPP-----EGFRALDLAKGLLELGFHPPTVYFPLI 409 (474)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCBCSSC---SSCCSCEEEBCS-----TTCCHHHHHHHHHHTTCCCCEESCSTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCC---CCCCEEEEEECC-----CCCCHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf 788899999999999999999886669575689---970148999747-----998899999999977926222546665
Q ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHH
Q ss_conf 89989998168899999999999999999999976359877788300028653443113
Q 001586 941 VPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKVTCLFLHHGYF 999 (1049)
Q Consensus 941 ~~~~lri~~t~~~t~eeid~fi~aL~~i~~~~~~i~~g~~~~~~~~l~~~ph~~~~~~~ 999 (1049)
..+.+|++++..++++++|+++++|+++.++ +++.++++||+++.+++
T Consensus 410 ~~~~lRis~~~~~t~e~id~~~~~L~~~~~~-----------~~~~l~~~p~~~~~~~~ 457 (474)
T 1wyu_B 410 VKEALMVEPTETEAKETLEAFAEAMGALLKK-----------PKEWLENAPYSTPVRRL 457 (474)
T ss_dssp STTCEEECCCTTSCHHHHHHHHHHHHHHHTS-----------CHHHHHTCCCSSSSCSB
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHH-----------CCHHHHCCCCCCCCCCC
T ss_conf 6987999951678999999999999999984-----------91143139988885764
No 3
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=1.00 E-value=1 Score=326.31 Aligned_cols=374 Identities=18% Similarity=0.202 Sum_probs=294.5
Q ss_pred CCCCCC-CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC---CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHH
Q ss_conf 299621-12788988889899999999999998617973---32014998899989099899888299643235988156
Q 001586 129 TVPKSI-RIDSMKFSKFDEGLTESQMIEHMQKLASMNKV---YKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAE 204 (1049)
Q Consensus 129 ~ip~~~-~~~~~~l~~~~~~~~E~e~~~~~~~la~~n~~---~~~~lG~g~~~~~~p~~i~~~~~~~~~~~t~ytpyq~e 204 (1049)
.||+++ ++.+++|| ++||.|+++++++++++|.. ...|+| |+++++.|.++. .+.++ ++.|+|||++
T Consensus 29 ~~p~~~~~~~~~~lp----~~~e~~~~~~~~~l~~~~~~~~~~~~~lg-~~~~~~~p~v~~-~~~~~---~~~~~~~~~~ 99 (474)
T 1wyu_B 29 LIPKEHLREVPPRLP----EVDELTLVRHYTGLSRRQVGVDTTFYPLG-SCTMKYNPKLHE-EAARL---FADLHPYQDP 99 (474)
T ss_dssp HSCGGGBCSSCCCCC----CCCHHHHHHHHHHHHTTCCCTTTSCCCBT-TTCCCCCCHHHH-HHHHT---TSSCCTTSCG
T ss_pred CCCHHHHCCCCCCCC----CCCHHHHHHHHHHHHHCCCCCCCCCCCCC-CCCCCCCHHHHH-HHHHH---HHHCCCCCCH
T ss_conf 399888406899999----98999999999999837878665862262-033227989999-99999---9732889952
Q ss_pred -HHHHHHHHHHHHHHHHHHHHCCCCCCEEEC-CCHHHHHHHHHHHHH-H--CCC---CCCEEEECCCCCHHHHHHHHHHH
Q ss_conf -751499999999999998709997526751-562899999999831-2--059---99889992999878999999853
Q 001586 205 -IAQGRLESLLNFQTMIADLTGLPMSNASLL-DEGTAAAEAMAMCNN-I--QKG---KKKTFIIASNCHPQTIDICITRA 276 (1049)
Q Consensus 205 -~sqG~le~l~e~q~~ia~L~G~~~an~sl~-d~~Ta~~ea~~la~~-~--~~~---~~~~viv~~~~Hps~~~~~~~~a 276 (1049)
.+||.++...++++++++++|++. .+++ .+||.+..+.+++.+ + .++ ++++|+++...|+++...++
T Consensus 100 ~~~~g~~~l~~~l~~~la~~~g~~~--~~~~~~ggt~a~~~al~~~~~~~~~~Gd~~~r~~Vlv~~~~h~~~~~~~~--- 174 (474)
T 1wyu_B 100 RTAQGALRLMWELGEYLKALTGMDA--ITLEPAAGAHGELTGILIIRAYHEDRGEGRTRRVVLVPDSAHGSNPATAS--- 174 (474)
T ss_dssp GGCHHHHHHHHHHHHHHHHHHTCSE--EECCCSSHHHHHHHHHHHHHHHHHHTTCTTTCCEEEEETTSCTHHHHHHH---
T ss_pred HHCHHHHHHHHHHHHHHHHHHCCCC--EEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHH---
T ss_conf 4586999999999999999978996--36518179999999999999999854776689989995874734699999---
Q ss_pred CCCCEEEEEECCC--------HHHC-CCCCEEEEEEECCCCCEEE-CCHHHHHHHHHHCCCEEEEEECCCCCCC--CCCC
Q ss_conf 3799199992730--------0103-4999769999849998245-3679999999867969999925666357--8999
Q 001586 277 DGFDIKVVVSDLK--------DIDY-KSGDVCGVLVQYPGTEGEV-LDYGDFIKNAHANGVKVVMATDLLALTI--LKPP 344 (1049)
Q Consensus 277 ~~~gi~v~~i~~~--------~l~~-l~~~t~~V~v~~pn~~G~i-~di~~I~~~ah~~gal~iV~a~~~al~~--l~~p 344 (1049)
..|++++.++.+ +|++ ++++|++|++++||++|.+ .|+++|+++||++|+++++|. ..+.+. ..++
T Consensus 175 -~~G~~vv~v~~~~~~~~d~~~L~~~i~~~t~~v~~~~pn~~G~~~~~l~~i~~l~~~~g~~li~De-a~~~~~~g~~~~ 252 (474)
T 1wyu_B 175 -MAGYQVREIPSGPEGEVDLEALKRELGPHVAALMLTNPNTLGLFERRILEISRLCKEAGVQLYYDG-ANLNAIMGWARP 252 (474)
T ss_dssp -HTTCEEEEECBCTTSSBCHHHHHHHCSTTEEEEEECSSCTTSCCCTTHHHHHHHHHHHTCEEEEEG-GGGGGTTTTCCH
T ss_pred -HCCCEEEEECCCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEEC-CHHHHHCCCCCC
T ss_conf -879889994579999809999997627884699998999873107789999999998499899967-404533367786
Q ss_pred CCCCCEEEEECC-CCCCCCCCCCCCCEEEEEECHHHHHCCCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCH
Q ss_conf 865530999067-4335447889970689997266773099923334231899842166412222110002468774304
Q 001586 345 GELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTA 423 (1049)
Q Consensus 345 g~~GaDivvgs~-k~lg~P~~~GGP~~Gfl~~~~~l~~~lpgrlvG~s~d~~g~~~~~l~lqtreqhirRekaTsnict~ 423 (1049)
+++|+|+++++. |+|++|+|+|||++|+++++++++++++++++|+ + | +.|.+++ +++||++|.+++. .
T Consensus 253 ~~~g~di~~~s~~K~~~~p~g~gG~~~G~~~~~~~l~~~l~~~~~~~--~--g-~~~~~~~-~~~~~~~~~~~~~----~ 322 (474)
T 1wyu_B 253 GDMGFDVVHLNLHKTFTVPHGGGGPGSGPVGVKAHLAPYLPVPLVER--G--E-EGFYLDF-DRPKSIGRVRSFY----G 322 (474)
T ss_dssp HHHTCSEEECCTTTTTCCCCTTSCCCCCCEEECGGGGGGCCSCEEEE--C--S-SCEEEEC-CCTTCCCCSSSTT----S
T ss_pred CCCCCCEEEEECCCCCCCCCCCCCCCEEEEEECHHHHHHCCCCEEEC--C--C-CEEEECC-CCCCCCCCCCCCC----C
T ss_conf 65787489981731544678789998679997278897689876504--6--8-7247525-5766676241576----8
Q ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEC-CCCCCCEEEEECC--C-HHHHHHHHHHCCCEE
Q ss_conf 68999999999998091109999999999999999996139986974-9997556999439--9-999999999869702
Q 001586 424 QALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQ-GLPFFDTVKVKCA--D-AHAIASAAYKIEMNL 499 (1049)
Q Consensus 424 ~al~a~~aa~y~~~lg~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~v~-~~~~~~~v~i~~~--~-~~~v~~~L~~~Gi~~ 499 (1049)
+.+....+..++..+|.++++++.++..++++++.+.|++.| +++. +...++++.+..+ . ..++.++|.++||.+
T Consensus 323 ~~~~~~aa~~~l~~~g~~~l~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~Gi~~ 401 (474)
T 1wyu_B 323 NFLALVRAWAYIRTLGLEGLKKAAALAVLNARYLKELLKEKG-YRVPYDGPSMHEFVAQPPEGFRALDLAKGLLELGFHP 401 (474)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CBCSSCSSCCSCEEEBCSTTCCHHHHHHHHHHTTCCC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CEECCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCC
T ss_conf 599999999999997788899999999999999999886669-5756899701489997479988999999999779262
Q ss_pred EEE-----CCCEEEEEECCCCCHHHHHHHHHHHHC
Q ss_conf 000-----599499994268999999999999939
Q 001586 500 RVV-----DSNTVTASFDETTTLEDVDKLFIVFAG 529 (1049)
Q Consensus 500 ~~~-----~~~~iris~~e~~t~edid~li~~l~~ 529 (1049)
... ..+.+|+++++++|++|+|+++++|+.
T Consensus 402 ~~~~~~~~~~~~lRis~~~~~t~e~id~~~~~L~~ 436 (474)
T 1wyu_B 402 PTVYFPLIVKEALMVEPTETEAKETLEAFAEAMGA 436 (474)
T ss_dssp CEESCSTTSTTCEEECCCTTSCHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHH
T ss_conf 22546665698799995167899999999999999
No 4
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=1.00 E-value=1 Score=314.53 Aligned_cols=407 Identities=20% Similarity=0.306 Sum_probs=301.8
Q ss_pred CCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC-CCCCC
Q ss_conf 68999999999999939999986777555543103999755789988995347778999999999999306357-67443
Q 001586 513 ETTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELS-LCHSM 591 (1049)
Q Consensus 513 e~~t~edid~li~~l~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~p~~~~~~se~ei~~~l~~l~~~d~~-~~~~~ 591 (1049)
.-+|++|++..++.+..+ +.++++. +||+++++. ++ .+| .++||.++++++..+++++.. +. ..
T Consensus 4 ~~~~~~~~~~ml~~~g~~-----~~~~~~~----~~p~~~~~~-~~-~lp---~~~~~~~~~~~~~~l~~~~~~~~~-~~ 68 (438)
T 1wyu_A 4 TPHTEEEIREMLRRVGAA-----SLEDLFA----HLPKEILSP-PI-DLP---EPLPEWKVLEELRRLAAQNLPAHK-AF 68 (438)
T ss_dssp CCCCHHHHHHHHHHHTCS-----STGGGGT----TSCGGGSSC-CC-CCC---CCCCHHHHHHHHHHHHHTSCCCTT-CC
T ss_pred CCCCHHHHHHHHHHCCCC-----CHHHHHH----HCCHHHHCC-CC-CCC---CCCCHHHHHHHHHHHHHCCCCCCC-CC
T ss_conf 992999999999974999-----8899988----585987458-78-989---998999999999999843767651-10
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCHHHHHCHHHHHHHHHHHHHHHHCCCCCC--CCCCCHHHHHHHHHHHH
Q ss_conf 354230036762111033357466-567999912221118999999999999762999120--02591699999999999
Q 001586 592 IPLGSCTMKLNATTEMMPVTWPSF-ANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFS--LQPNAGAAGEYAGLMVI 668 (1049)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f-~~~~P~~p~e~~~G~~~~~~el~~~lael~G~~~~~--l~~~sGa~ge~a~l~ai 668 (1049)
...|.+....+..+... ...++| .+|+|++| +.++|..+++.++++++++++|++..+ +..++++ +.+++++++
T Consensus 69 ~~~g~~~~~~p~~v~~~-~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~la~~~g~~~~~i~~~~g~ta-a~ea~~~a~ 145 (438)
T 1wyu_A 69 LGGGVRSHHVPPVVQAL-AARGEFLTAYTPYQP-EVSQGVLQATFEYQTMIAELAGLEIANASMYDGATA-LAEGVLLAL 145 (438)
T ss_dssp CCSSCCCCCCCHHHHHH-HTSHHHHHCCSCCSG-GGCHHHHHHHHHHHHHHHHHHTSSEECSCBSSHHHH-HHHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHH-HHCCHHHHCCCCCCC-HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHH-HHHHHHHHH
T ss_conf 67776587182899998-746312314787760-656449999999999999985998325688372789-999999997
Q ss_pred HHHHHHCCCCCCCEEEECCCCCCCCHHH----HHHCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCC
Q ss_conf 9999960999998999949998764988----876597999991899999899999999880599848999984896300
Q 001586 669 RAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGV 744 (1049)
Q Consensus 669 r~y~~~~G~~~r~~ILip~saHgt~pa~----a~~~G~~Vv~V~~d~~g~iDle~L~~~i~k~~~~ta~Vvit~Ps~~G~ 744 (1049)
+. . ++++||++...|.++... +...|++++.++. +++.+|+++ ++ ++|++|++++||.+|.
T Consensus 146 ~~---~----~gd~Viv~~~~h~s~~~~~~~~a~~~G~~v~~v~~-~~~~~d~~~----i~---~~t~~v~i~~pn~tG~ 210 (438)
T 1wyu_A 146 RE---T----GRMGVLVSQGVHPEYRAVLRAYLEAVGAKLLTLPL-EGGRTPLPE----VG---EEVGAVVVQNPNFLGA 210 (438)
T ss_dssp HH---H----TCCEEEEETTSCHHHHHHHHHHHHHTTCEEEEECC-BTTBCCCCC----CC---TTEEEEEEESSCTTSB
T ss_pred HC---C----CCCEEEECCCCCHHHHHHHHHHHHHCCCEEEEECC-CCCCCCHHH----HC---CCEEEEEEECCCCCEE
T ss_conf 60---7----99989984865876899999999877978999867-678668899----18---8738999987998727
Q ss_pred CCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCC
Q ss_conf 13368999999998099999966563222476798766775998189742356788888950577774332364999964
Q 001586 745 YEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPV 824 (1049)
Q Consensus 745 i~~dI~eIa~ia~~~G~~l~vD~A~~~a~~gl~~Pg~~GaDiv~~s~hKtl~~p~g~GGPg~G~i~~~~~l~~~lp~~~v 824 (1049)
+. |+++|+++||++|+++++|.. ..+++.+..|+++|+|++++| +|.|++|++++|||+|++++++++.++++++.+
T Consensus 211 ~~-~l~~i~~la~~~g~~vivd~d-~~a~g~~~~~~~~g~D~~~~s-~kk~~~~~~~~Gp~~G~l~~~~~~~~~l~~~~~ 287 (438)
T 1wyu_A 211 LE-DLGPFAEAAHGAGALFVAVAD-PLSLGVLKPPGAYGADIAVGD-GQSLGLPMGFGGPHFGFLATKKAFVRQLPGRLV 287 (438)
T ss_dssp CC-CHHHHHHHHHHTTCEEEEECC-TTGGGTBCCHHHHTCSEEEEE-CTTTTCCCGGGCSCCEEEEECGGGGGGCCSCCE
T ss_pred EE-CHHHHHHHHHHCCCEEEEEEC-HHHCCCCCCCCCCCCCEEEEC-CCCCCCCCCCCCCCEEEEEECHHHHHHCCCCEE
T ss_conf 70-299999999985998999864-654107589764799889977-864678866899876678976999974998632
Q ss_pred CCCCCC-CC------------C-CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCC-
Q ss_conf 347899-99------------8-87888888784101347899999999999764229999999999999999998400-
Q 001586 825 VSTGGI-PA------------P-EKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH- 889 (1049)
Q Consensus 825 g~~~~~-~~------------~-~~~~~~~~i~sa~~g~~~~l~~a~a~l~~lG~eGl~~~~~~~~~~a~~L~~~L~~~- 889 (1049)
|.+.+. +. + .+++++.++|+. +...+..+++++..++.+|+.+..++...+++++.++|+++
T Consensus 288 g~~~~~~~~~~~~~~l~~~~~~~r~~~~t~~~~~~---~~~~a~~aa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~ 364 (438)
T 1wyu_A 288 SETVDVEGRRGFILTLQAREQYIRRAKAKSNITTN---AQLTALMGAMYLAALGPEGLREVALKSVEMAHKLHALLLEVP 364 (438)
T ss_dssp EEEEBTTSCEEEEECCGGGSHHHHGGGSSCCCCSC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTST
T ss_pred CCCCCCCCCCCEEEECCCCCCCCCHHCCCCCCCCH---HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 22235688743256326665532011256773421---999999999999996888899999999999999999976289
Q ss_pred -CCEEECCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCC--C-CCCCCCCCEEEEECCCCCCHHHHHHHHHHH
Q ss_conf -990012688840148999656753458999999999999789604--7-888898998999816889999999999999
Q 001586 890 -YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHG--P-TMSWPVPGTLMIEPTESESKEELDRYCDAL 965 (1049)
Q Consensus 890 -~~i~~~g~~~~~~~e~iv~~~~~~~~~gi~~~~iak~L~~~Gi~~--~-~~~~p~~~~lri~~t~~~t~eeid~fi~aL 965 (1049)
+++. ++ .++++.+.+..+ .+..++.++|.++||.+ + +..++ .+.+|+++++.++++|+|+++++|
T Consensus 365 g~~~~--~~-~~~~~~~~~~~~-------~~~~~~~~~L~~~gi~v~~~~~~~~~-~~~lRis~~~~~t~edi~~~~~~l 433 (438)
T 1wyu_A 365 GVRPF--TP-KPFFNEFALALP-------KDPEAVRRALAERGFHGATPVPREYG-ENLALFAATELHEEEDLLALREAL 433 (438)
T ss_dssp TCEEC--SC-SSBCSEEEEECS-------SCHHHHHHHHHHTTCCCCEECCTTSC-SSEEEEECCTTCCHHHHHHHHHHH
T ss_pred CEEEC--CC-CCEEEEEEEECC-------CCHHHHHHHHHHCCCEECCCCCCCCC-CCEEEEEECCCCCHHHHHHHHHHH
T ss_conf 86877--89-983789999579-------99999999999789565245662438-996999951468999999999999
Q ss_pred HHHH
Q ss_conf 9999
Q 001586 966 ISIR 969 (1049)
Q Consensus 966 ~~i~ 969 (1049)
++++
T Consensus 434 ~~~l 437 (438)
T 1wyu_A 434 KEVL 437 (438)
T ss_dssp HHHC
T ss_pred HHHH
T ss_conf 9985
No 5
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=1.00 E-value=1 Score=285.73 Aligned_cols=421 Identities=15% Similarity=0.140 Sum_probs=298.7
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHCC--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCHHHHHHH
Q ss_conf 8995347778999999999999306--35767443354230036762111033357466567999912221118999999
Q 001586 559 LTHPVFNKYHTEHELLRYIHLLQSK--ELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNN 636 (1049)
Q Consensus 559 ~~~p~~~~~~se~ei~~~l~~l~~~--d~~~~~~~i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~~G~~~~~~e 636 (1049)
..+| ..++++.+++++++++.+. +..+.++.+..+.+... +...+.+...+..|.+.+++++ +.++|..+++.+
T Consensus 36 ~~lp--~~g~~~~~i~~~l~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~ 111 (497)
T 3mc6_A 36 PQLP--SNGIPQDDVIEELNKLNDLIPHTQWKEGKVSGAVYHGG-DDLIHLQTIAYEKYCVANQLHP-DVFPAVRKMESE 111 (497)
T ss_dssp SSCC--SSCCCHHHHHHHHHHHHHSSCCCCGGGTCBSSSCSCCC-HHHHHHHHHHHHHTSSCBTTCT-TTCHHHHHHHHH
T ss_pred CCCC--CCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCC-HHHHHHHHHHHHHHHHCCCCCC-CCCHHHHHHHHH
T ss_conf 6789--89989999999999986503898889998844637893-6799999999997753278882-207579999999
Q ss_pred HHHHHHHHHCCC--C-CCCCCCCHHHHHHHHHHHHHHHHHH-CCCCCCCEEEECCCCCCCCHHHHHHCCCEEEEECCCC-
Q ss_conf 999999762999--1-2002591699999999999999996-0999998999949998764988876597999991899-
Q 001586 637 LGEWLCTITGFD--S-FSLQPNAGAAGEYAGLMVIRAYHKA-RGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA- 711 (1049)
Q Consensus 637 l~~~lael~G~~--~-~~l~~~sGa~ge~a~l~air~y~~~-~G~~~r~~ILip~saHgt~pa~a~~~G~~Vv~V~~d~- 711 (1049)
+++++++++|++ . ..+.+++|++++..++++++.+... +|. .+++|+++...|.++...+...|++++.|++++
T Consensus 112 ~~~~la~~~g~~~~~~~~~~~~ggt~a~~~a~~a~~~~~~~~~g~-~~~~Vi~~~~~h~~~~~~~~~~G~~~~~v~~~~~ 190 (497)
T 3mc6_A 112 VVSMVLRMFNAPSDTGCGTTTSGGTESLLLACLSAKMYALHHRGI-TEPEIIAPVTAHAGFDKAAYYFGMKLRHVELDPT 190 (497)
T ss_dssp HHHHHHHHTTCCTTTCCEEEESSHHHHHHHHHHHHHHHHHHHSCC-SSCEEEEETTSCHHHHHHHHHSCCEEEEECBCTT
T ss_pred HHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCC-CCCEEEEECCCCHHHHHHHHHCCCEEEEEECCCC
T ss_conf 999999984899889849983737899999999999888753899-7764999577407899999985982799951764
Q ss_pred CCCCCHHHHHHHHHHCCCCEEEEEEECCC-CCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCC---------C--CCC
Q ss_conf 99989999999988059984899998489-63001336899999999809999996656322247---------6--798
Q 001586 712 KGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVG---------L--TSP 779 (1049)
Q Consensus 712 ~g~iDle~L~~~i~k~~~~ta~Vvit~Ps-~~G~i~~dI~eIa~ia~~~G~~l~vD~A~~~a~~g---------l--~~P 779 (1049)
++.+|+++|+++++ +++++|++++|+ .+|.++ |+++|+++|+++|+++++|+|+...... + ...
T Consensus 191 ~~~~d~~~l~~~i~---~~~~~v~~~~p~nptG~~~-~l~~i~~la~~~g~~livD~a~~~~~~~f~~~~~~~~~~~~~~ 266 (497)
T 3mc6_A 191 TYQVDLGKVKKFIN---KNTVLLVGSAPNFPHGIAD-DIEGLGKIAQKYKLPLHVDSCLGSFIVSFMEKAGYKNLPLLDF 266 (497)
T ss_dssp TCSBCTTTTGGGCC---SSEEEEEEETTCTTTCCCC-SCTTTTTHHHHTTCCEEEETTTTHHHHGGGTTTTCCSCCCCST
T ss_pred CCCCCHHHHHHHHH---HCCEEEEEECCCCCCCCCC-CHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHCCCCCCCCCC
T ss_conf 58699999999870---4887999978998887577-8999999999839979997764456666444305667763335
Q ss_pred CCCCCCEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 76677599818974235678888895057777433236499996434789999887888888784101347899999999
Q 001586 780 GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTY 859 (1049)
Q Consensus 780 g~~GaDiv~~s~hKtl~~p~g~GGPg~G~i~~~~~l~~~lp~~~vg~~~~~~~~~~~~~~~~i~sa~~g~~~~l~~a~a~ 859 (1049)
...|+|++++++||++. +++++|+++++++.......... . . ..+.......+.++. .....++.|++
T Consensus 267 ~~~g~d~~~~s~~K~l~-----~~~~~g~~~~~~~~~~~~~~~~~-~--~--~~~~~~~~~~~~g~~--~~~~~~a~~aa 334 (497)
T 3mc6_A 267 RVPGVTSISCDTHKYGF-----APKGSSVIMYRNSDLRMHQYYVN-P--A--WTGGLYGSPTLAGSR--PGAIVVGCWAT 334 (497)
T ss_dssp TSTTCCEEEEETTTTTC-----CCSSCEEEECSSHHHHTTTSCCB-T--T--CTTSCBCCSSSCSSC--BHHHHHHHHHH
T ss_pred CCCCCCEEEECCHHHCC-----CCCCCEEEEECCHHHHHHHHCCC-C--C--CCCCCCCCCCCCCCC--CCHHHHHHHHH
T ss_conf 67897189989524157-----78883158863788875301026-6--6--557776786756377--64269999999
Q ss_pred HHHHCHHHHHHHHHHHHHHHHHHHHHHHC-CCCEEECCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCC
Q ss_conf 99976422999999999999999999840-09900126888401489996567534589999999999997896047888
Q 001586 860 IAMMGSKGLTEASKIAILNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMS 938 (1049)
Q Consensus 860 l~~lG~eGl~~~~~~~~~~a~~L~~~L~~-~~~i~~~g~~~~~~~e~iv~~~~~~~~~gi~~~~iak~L~~~Gi~~~~~~ 938 (1049)
+..++.+|+.+..++..++++++.++|++ +..+...++ +....+.+... +.+..++.++|.++||.++...
T Consensus 335 l~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~g~~~~~~--~~~~~v~~~~~------~~~~~~l~~~L~~~Gi~v~~~~ 406 (497)
T 3mc6_A 335 MVNMGENGYIESCQEIVGAAMKFKKYIQENIPDLDIMGN--PRYSVISFSSK------TLNIHELSDRLSKKGWHFNALQ 406 (497)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTCEECSC--CCSSEEEEECT------TTTHHHHHHHHHTTTCBCEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECC--CCEEEEEEECC------CCCHHHHHHHHHHCCEEEECCC
T ss_conf 999828789999999999999999999850999899668--87148999679------9899999999996897986678
Q ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC-CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 89899899981688999999999999999999999763598-77788300028653443113577888677753
Q 001586 939 WPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGK-ADIHNNVLKVTCLFLHHGYFFSYIVKEINICI 1011 (1049)
Q Consensus 939 ~p~~~~lri~~t~~~t~eeid~fi~aL~~i~~~~~~i~~g~-~~~~~~~l~~~ph~~~~~~~~~~~~~~~~~~~ 1011 (1049)
+| ..+|++++ ..+++++|+++++|.++++++......+ .......+++...+.+++..+..+++.+-...
T Consensus 407 ~~--~~~ri~~~-~~t~e~i~~~~~~L~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 477 (497)
T 3mc6_A 407 KP--VALHMAFT-RLSAHVVDEICDILRTTVQELKSESNSKPSPDGTSALYGVAGSVKTAGVADKLIVGFLDAL 477 (497)
T ss_dssp SS--CCEEEECC-TTTTCTHHHHHHHHHHHHHHHTCC-----------------------CCTHHHHHHHHHTT
T ss_pred CC--CEEEEEEE-CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 99--76899985-8999999999999999999998386767788987742331245797579999999999987
No 6
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=1.00 E-value=1 Score=259.94 Aligned_cols=418 Identities=14% Similarity=0.130 Sum_probs=288.9
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCHHHHHHH
Q ss_conf 889953477789999999999993063-5767443354230036762111033357466567999912221118999999
Q 001586 558 YLTHPVFNKYHTEHELLRYIHLLQSKE-LSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNN 636 (1049)
Q Consensus 558 ~~~~p~~~~~~se~ei~~~l~~l~~~d-~~~~~~~i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~~G~~~~~~e 636 (1049)
+..+| ..+.++.++++.++++...+ .++..+. .+|......+.....+...+..+.+.+++++ ..+++..++..+
T Consensus 68 ~~~lp--~~g~~~~~i~~~l~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~~~le~~ 143 (514)
T 3mad_A 68 HARLP--RAGLPRAEILAEIAAMGAAESPAWRDGY-ASGAVYHGDEHHIAFLNEVYALQSQSNPLHP-DLWPSTAKFEAE 143 (514)
T ss_dssp CSSCC--SSCCCHHHHHHHHHHHHHHHHHHHHTTC-BSSSCSCCCHHHHHHHHHHHHHHTTCCTTCT-TTCHHHHHHHHH
T ss_pred CCCCC--CCCCCHHHHHHHHHHHHHCCCCCCCCCC-EEEEECCCCCCHHHHHHHHHHHHHHCCCCCC-CCCHHHHHHHHH
T ss_conf 67889--8899999999999998744688888984-6888518997799999999999852577654-468589999999
Q ss_pred HHHHHHHHHCCCC---CC--CCCCCHHHHHHHHHHHHHHHHH-HCCCCCCCEEEECCCCCCCCHHHHHHCCCEEEEECCC
Q ss_conf 9999997629991---20--0259169999999999999999-6099999899994999876498887659799999189
Q 001586 637 LGEWLCTITGFDS---FS--LQPNAGAAGEYAGLMVIRAYHK-ARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTD 710 (1049)
Q Consensus 637 l~~~lael~G~~~---~~--l~~~sGa~ge~a~l~air~y~~-~~G~~~r~~ILip~saHgt~pa~a~~~G~~Vv~V~~d 710 (1049)
+++++++++|.+. .. +..++|++++..++++++.+.. .+|. ++++||++...|..+...+...|++++.++++
T Consensus 144 l~~~la~~~g~~~~~~~v~~~~t~ggt~a~~~al~a~~~~g~~~~g~-~~d~Vi~~~~~~~~~~~~~~~~G~~v~~v~~~ 222 (514)
T 3mad_A 144 VVAMTAHMLGGDAAGGTVCGTVTSGGTESLLLAMKTYRDWARATKGI-TAPEAVVPVSAHAAFDKAAQYFGIKLVRTPLD 222 (514)
T ss_dssp HHHHHHHHTTGGGGTSCCEEEEESSHHHHHHHHHHHHHHHHHHHHCC-SSCEEEEETTSCTHHHHHHHHHTCEEEEECBC
T ss_pred HHHHHHHHCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHCCC-CCCEEEEECCCCHHHHHHHHHCCCEEEEEEEC
T ss_conf 99999997297976677646985857999999999999876653699-87769996750247899999759746996108
Q ss_pred CCCCCCHHHHHHHHHHCCCCEEEEEEECCCC-CCCCCCCHHHHHHHHHHCCCEEEEECCCCCCC------CCC----CCC
Q ss_conf 9999899999999880599848999984896-30013368999999998099999966563222------476----798
Q 001586 711 AKGNINIEELRKAAEANRDNLSTLMVTYPST-HGVYEEGIDEICKIIHDNGGQVYMDGANMNAQ------VGL----TSP 779 (1049)
Q Consensus 711 ~~g~iDle~L~~~i~k~~~~ta~Vvit~Ps~-~G~i~~dI~eIa~ia~~~G~~l~vD~A~~~a~------~gl----~~P 779 (1049)
+++.+|+++|+++++ +++++|++++|++ +|.++ ++++|+++|+++|+++++|+|+.... .|. ...
T Consensus 223 ~~~~~d~~~Le~~i~---~~~~~v~~~~~~nptG~~~-~l~~i~~la~~~~i~livDea~~~~~~~~~~~~g~~~~~~~~ 298 (514)
T 3mad_A 223 ADYRADVAAMREAIT---PNTVVVAGSAPGYPHGVVD-PIPEIAALAAEHGIGCHVDACLGGFILPWAERLGYPVPPFDF 298 (514)
T ss_dssp TTSCBCHHHHHHHCC---TTEEEEEEETTCTTTCCCC-CHHHHHHHHHHHTCEEEEECTTTTTTHHHHHHTTCCCCCCST
T ss_pred CCCCCCHHHHHHHHC---CCCEEEEEECCCCCCCCCC-CHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHCCCCCCCCCC
T ss_conf 998798999999865---1988999807888885646-899999999981995999633233210037761888876434
Q ss_pred CCCCCCEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 76677599818974235678888895057777433236499996434789999887888888784101347899999999
Q 001586 780 GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTY 859 (1049)
Q Consensus 780 g~~GaDiv~~s~hKtl~~p~g~GGPg~G~i~~~~~l~~~lp~~~vg~~~~~~~~~~~~~~~~i~sa~~g~~~~l~~a~a~ 859 (1049)
...|+|++++++||++. +++++|+++++++.......... .++ .+.........++.. ...+...|+.
T Consensus 299 ~~~g~d~~~~s~~K~l~-----~~~~~g~~~~~~~~~~~~~~~~~---~~~--~~~~~~~~~~~gs~~--~~~~~a~~aa 366 (514)
T 3mad_A 299 RLEGVTSVSADTHKYGY-----GAKGTSVILYRRPDLLHYQYFIA---ADW--PGGLYFSPTFAGSRP--GALSATAWAA 366 (514)
T ss_dssp TSTTCCEEEECTTTTTC-----CCSSCEEEEESSHHHHTTTCEEE---SSC--TTCSEEESSSCSSCC--HHHHHHHHHH
T ss_pred CCCCCCEEEECCHHCCC-----CCCCEEEEEEECHHHHCCCCCCC---CCC--CCCCCCCCCCCCCCC--HHHHHHHHHH
T ss_conf 57898689989100368-----89982799994778830133446---566--777666875577874--4789999999
Q ss_pred HHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCC
Q ss_conf 99976422999999999999999999840099001268884014899965675345899999999999978960478888
Q 001586 860 IAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSW 939 (1049)
Q Consensus 860 l~~lG~eGl~~~~~~~~~~a~~L~~~L~~~~~i~~~g~~~~~~~e~iv~~~~~~~~~gi~~~~iak~L~~~Gi~~~~~~~ 939 (1049)
+..++.+++.+..++..++++++.++|+++..+...++.. . .+.+... +.+..++.++|.++||.++...+
T Consensus 367 l~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~-~--~~~~~~~------~~~~~~l~~~L~~~Gi~v~g~~~ 437 (514)
T 3mad_A 367 MLSLGEEGYLDATRRILQAADRLKAGVRAIPSLKILGDPL-W--VIAVASD------ELNIYQVMEEMAGRGWRLNGLHR 437 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCEESSCCS-S--EEEEECS------SSCHHHHHHHHHTTTCBCEEETT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCE-E--EEEEECC------CCCHHHHHHHHHHCCCEECCCCC
T ss_conf 9997487899999999999999999985089959957976-9--9998189------99999999999966978525778
Q ss_pred CCCCEEEEECCC-CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 989989998168-89999999999999999999997635987778830002865344311357788867775
Q 001586 940 PVPGTLMIEPTE-SESKEELDRYCDALISIREEIAQIENGKADIHNNVLKVTCLFLHHGYFFSYIVKEINIC 1010 (1049)
Q Consensus 940 p~~~~lri~~t~-~~t~eeid~fi~aL~~i~~~~~~i~~g~~~~~~~~l~~~ph~~~~~~~~~~~~~~~~~~ 1010 (1049)
++.+|++++. .++++++|+++++|++++++++.-... ..+...+++...++++ .++.++++.+-..
T Consensus 438 --~~~~Ri~~~~~~~~~e~i~~~l~~L~~~l~~~~~~~~~--~~~~~~~yg~~~~~~~-~~~~~~~~~~~~~ 504 (514)
T 3mad_A 438 --PPAFHVALTLRHTEPGVVDRFLADLQDAVAQVRAHPEK--ATGMAPVYGMAAAAPP-ELVRQVLTGFIDL 504 (514)
T ss_dssp --TTEEEEECCGGGGSTTHHHHHHHHHHHHHHHHHHCTTC--CCTTHHHHHHHHHSCH-HHHHHHHHHHHHH
T ss_pred --CCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCC--CCCCEEHHHHCCCCCH-HHHHHHHHHHHHH
T ss_conf --98699997158799999999999999999999837878--8982204322124877-8999999999999
No 7
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=1.00 E-value=1 Score=245.83 Aligned_cols=383 Identities=11% Similarity=0.010 Sum_probs=256.6
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCHHHHHHHHH
Q ss_conf 99534777899999999999930635767-44335423003676211103335746656799991222111899999999
Q 001586 560 THPVFNKYHTEHELLRYIHLLQSKELSLC-HSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLG 638 (1049)
Q Consensus 560 ~~p~~~~~~se~ei~~~l~~l~~~d~~~~-~~~i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~~G~~~~~~el~ 638 (1049)
.+| .++.+++++++++.++...+.... +...+++ +...+...+.+. +..+.+++++ +.+++..+++.+++
T Consensus 17 ~lp--~~g~~~~~v~~~~~~~~~~~~~~~~~~~~f~~--~~~~~~v~e~~~----~a~~~~~~~~-~~~~~~~~l~~~~~ 87 (452)
T 2dgk_A 17 RFP--LHEMRDDVAFQIINDELYLDGNARQNLATFCQ--TWDDENVHKLMD----LSINKNWIDK-EEYPQSAAIDLRCV 87 (452)
T ss_dssp SCC--CSCCCHHHHHHHHHHHGGGSCCCTTBCSCCSC--CCCCHHHHHHHH----HTTTCBTTCT-TTCHHHHHHHHHHH
T ss_pred CCC--CCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEC--CCCHHHHHHHHH----HHHCCCCCCH-HHCHHHHHHHHHHH
T ss_conf 878--89999999999999985578987667897067--776499999999----9861578973-33765999999999
Q ss_pred HHHHHHHCCCCC------CCCCCCHHHHHHHHHHHHHHHHH----HCCCC-CCCEEEECCCCCCCCHHHHHHCCCEEEEE
Q ss_conf 999976299912------00259169999999999999999----60999-99899994999876498887659799999
Q 001586 639 EWLCTITGFDSF------SLQPNAGAAGEYAGLMVIRAYHK----ARGDH-HRNVCIIPVSAHGTNPATAAMCGMKIVSV 707 (1049)
Q Consensus 639 ~~lael~G~~~~------~l~~~sGa~ge~a~l~air~y~~----~~G~~-~r~~ILip~saHgt~pa~a~~~G~~Vv~V 707 (1049)
+++++++|++.. .+..++|+.++..++++++..+. .+|.. .+++||++. .|.++...+.+.|++++.|
T Consensus 88 ~~la~l~g~~~~~~~~~~~~~t~ggtea~~~al~a~~~~~~~~~~~~G~~~~~~~vi~~~-~h~~~~~~~~~~G~~v~~v 166 (452)
T 2dgk_A 88 NMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGP-VQICWHKFARYWDVELREI 166 (452)
T ss_dssp HHHHHHTTCCCCTTSCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEESS-CCHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECC-CCHHHHHHHHHCCCEEEEE
T ss_conf 999998489933356886499387899999999999999987887548887782799888-7399999998769457997
Q ss_pred CCCC-CCCCCHHHHHHHHHHCCCCEEEEEEECCC-CCCCCCCCHHHHHHHHHHC------CCEEEEECCCCCCCCCC-CC
Q ss_conf 1899-99989999999988059984899998489-6300133689999999980------99999966563222476-79
Q 001586 708 GTDA-KGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDN------GGQVYMDGANMNAQVGL-TS 778 (1049)
Q Consensus 708 ~~d~-~g~iDle~L~~~i~k~~~~ta~Vvit~Ps-~~G~i~~dI~eIa~ia~~~------G~~l~vD~A~~~a~~gl-~~ 778 (1049)
++++ ++.+|+++|+++++ ++|++|++++|+ .+|.++ |+++|+++|+++ |+++|||+|+......+ ..
T Consensus 167 ~~~~~~~~~d~~~l~~~i~---~~t~~v~~~~~~n~tG~~~-~l~~I~~ia~~~~~~~~~~~~l~vD~a~~~~~~~~~~~ 242 (452)
T 2dgk_A 167 PMRPGQLFMDPKRMIEACD---ENTIGVVPTFGVTYTGNYE-FPQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAP 242 (452)
T ss_dssp CCBTTBCSCCHHHHHHHCC---TTEEEEECBBSCTTTCBBC-CHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCT
T ss_pred ECCCCCCEECHHHHHHHHH---HCCEEEEEECCCCCCCCCC-CHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHCC
T ss_conf 4288887397999999986---6888999975886882307-99999999999865107897279974517778774085
Q ss_pred --CC---CCCCCEEEECCCCCCCCCCCCCCCCEEEEEECCC-CC-CCC---CCCCCCCCCCCCCCCCCCCCCCCCCCCHH
Q ss_conf --87---6677599818974235678888895057777433-23-649---99964347899998878888887841013
Q 001586 779 --PG---YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH-LA-PFL---PSHPVVSTGGIPAPEKSQPLGTIAAAPWG 848 (1049)
Q Consensus 779 --Pg---~~GaDiv~~s~hKtl~~p~g~GGPg~G~i~~~~~-l~-~~l---p~~~vg~~~~~~~~~~~~~~~~i~sa~~g 848 (1049)
+. ..++|++++++||++ ++++++|++++++. +. ..+ +....+. .......... .
T Consensus 243 ~~~~~~~~~~~d~~~~~~hK~~-----~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~r---~- 306 (452)
T 2dgk_A 243 DIVWDFRLPRVKSISASGHKFG-----LAPLGCGWVIWRDEEALPQELVFNVDYLGGQ-------IGTFAINFSR---P- 306 (452)
T ss_dssp TCCCSTTSTTEEEEEEETTTTT-----CCCSSCEEEEESSGGGSCGGGCEEECCTTCC-------EEECCSCCSC---B-
T ss_pred CCHHHCCCCCCCEEEECCCCCC-----CCCCCEEEEEECCHHHHHHHHCCCCCCCCCC-------CCCCCCCCCC---H-
T ss_conf 4242227888737987763356-----8988868999859999788744686534899-------8875607897---2-
Q ss_pred HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCC--CCEEECCCCCCEEEEEEEECCCCCCCCCCCHHHHHHH
Q ss_conf 47899999999999764229999999999999999998400--9900126888401489996567534589999999999
Q 001586 849 SALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKR 926 (1049)
Q Consensus 849 ~~~~l~~a~a~l~~lG~eGl~~~~~~~~~~a~~L~~~L~~~--~~i~~~g~~~~~~~e~iv~~~~~~~~~gi~~~~iak~ 926 (1049)
...+...|+.+..+|.+|+.+..++..++++++.++|+++ ++++.++...+..+.+.|.++... ....+..++.++
T Consensus 307 -~~~~~~~~aal~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~~~~v~f~~~~~~-~~~~~~~~l~~~ 384 (452)
T 2dgk_A 307 -AGQVIAQYYEFLRLGREGYTKVQNASYQVAAYLADEIAKLGPYEFICTGRPDEGIPAVCFKLKDGE-DPGYTLYDLSER 384 (452)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSEEEEEECCTTTBSSEEEEEECTTC-CCSCCHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCEEEEEEEECCCC-CCCCCHHHHHHH
T ss_conf -489999999999973999999999999999999999974899699437888887689999955864-344799999999
Q ss_pred HHHCCCCCCCCCCC----CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99789604788889----8998999816889999999999999999999997
Q 001586 927 LMDYGFHGPTMSWP----VPGTLMIEPTESESKEELDRYCDALISIREEIAQ 974 (1049)
Q Consensus 927 L~~~Gi~~~~~~~p----~~~~lri~~t~~~t~eeid~fi~aL~~i~~~~~~ 974 (1049)
|.++||.++....| ..+.+|++++..+|++|+|+|+++|+++.+.++.
T Consensus 385 L~~~Gi~v~~~~~~~~~~~~~~lRis~~~~~t~e~id~li~~l~~~~~~~~~ 436 (452)
T 2dgk_A 385 LRLRGWQVPAFTLGGEATDIVVMRIMCRRGFEMDFAELLLEDYKASLKYLSD 436 (452)
T ss_dssp HHHTTCBCCEEECSTTCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHCCCEEEEEECCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 9964986213507866378289999945888899999999999999999983
No 8
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=1.00 E-value=1 Score=241.93 Aligned_cols=388 Identities=13% Similarity=0.172 Sum_probs=276.0
Q ss_pred CCCCHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC--CCCCC--CCCCCCCCCC
Q ss_conf 9999999999998809999887652029962112788988889899999999999998617--97332--0149988999
Q 001586 103 NSATPEDQAKMSELVGLDNLDSLIDATVPKSIRIDSMKFSKFDEGLTESQMIEHMQKLASM--NKVYK--SFIGMGYYNT 178 (1049)
Q Consensus 103 ~~~~~~~~~~ml~~~g~~~~~~l~~~~ip~~~~~~~~~l~~~~~~~~E~e~~~~~~~la~~--n~~~~--~~lG~g~~~~ 178 (1049)
||++++++++||+.++.+..++|+.. +|... ....+| ++++++.+++++++++... +..+. +|.|..+.+.
T Consensus 3 ~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~lp--~~g~~~~~i~~~l~~~~~~~~~~~~~~~~~~g~~~~~~ 77 (497)
T 3mc6_A 3 SPFLRGTVEKEVTKVKQSIEDELIRS-DSQLM--NFPQLP--SNGIPQDDVIEELNKLNDLIPHTQWKEGKVSGAVYHGG 77 (497)
T ss_dssp -----------------------------CCC--CCSSCC--SSCCCHHHHHHHHHHHHHSSCCCCGGGTCBSSSCSCCC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCCC-CCCCC--CCCCCC--CCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCC
T ss_conf 98367899999999999998742577-66620--026789--89989999999999986503898889998844637893
Q ss_pred CCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC--CCCEEECCCHHHHHHHHHHHHHH-C---C
Q ss_conf 8909989988829964323598815675149999999999999870999--75267515628999999998312-0---5
Q 001586 179 HVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLP--MSNASLLDEGTAAAEAMAMCNNI-Q---K 252 (1049)
Q Consensus 179 ~~p~~i~~~~~~~~~~~t~ytpyq~e~sqG~le~l~e~q~~ia~L~G~~--~an~sl~d~~Ta~~ea~~la~~~-~---~ 252 (1049)
|.+. +.+.+.-..+..+++++++.++|..+...++++++++++|++ ..++.+++|+|.+...++.+.+. . +
T Consensus 78 --~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~~~~ggt~a~~~a~~a~~~~~~~~~ 154 (497)
T 3mc6_A 78 --DDLI-HLQTIAYEKYCVANQLHPDVFPAVRKMESEVVSMVLRMFNAPSDTGCGTTTSGGTESLLLACLSAKMYALHHR 154 (497)
T ss_dssp --HHHH-HHHHHHHHHTSSCBTTCTTTCHHHHHHHHHHHHHHHHHTTCCTTTCCEEEESSHHHHHHHHHHHHHHHHHHHS
T ss_pred --HHHH-HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHCC
T ss_conf --6799-9999999977532788822075799999999999999848998898499837378999999999998887538
Q ss_pred C-CCCEEEECCCCCHHHHHHHHHHHCCCCEEEEEECCC---------HHHC-CCCCEEEEEEECCC-CCEEECCHHHHHH
Q ss_conf 9-998899929998789999998533799199992730---------0103-49997699998499-9824536799999
Q 001586 253 G-KKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK---------DIDY-KSGDVCGVLVQYPG-TEGEVLDYGDFIK 320 (1049)
Q Consensus 253 ~-~~~~viv~~~~Hps~~~~~~~~a~~~gi~v~~i~~~---------~l~~-l~~~t~~V~v~~pn-~~G~i~di~~I~~ 320 (1049)
+ .+++|+++...|+++...++. .|++++.++.+ +|++ +++++++|++++|+ .+|.+.|+++|++
T Consensus 155 g~~~~~Vi~~~~~h~~~~~~~~~----~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~l~~i~~ 230 (497)
T 3mc6_A 155 GITEPEIIAPVTAHAGFDKAAYY----FGMKLRHVELDPTTYQVDLGKVKKFINKNTVLLVGSAPNFPHGIADDIEGLGK 230 (497)
T ss_dssp CCSSCEEEEETTSCHHHHHHHHH----SCCEEEEECBCTTTCSBCTTTTGGGCCSSEEEEEEETTCTTTCCCCSCTTTTT
T ss_pred CCCCCEEEEECCCCHHHHHHHHH----CCCEEEEEECCCCCCCCCHHHHHHHHHHCCEEEEEECCCCCCCCCCCHHHHHH
T ss_conf 99776499957740789999998----59827999517645869999999987048879999789988875778999999
Q ss_pred HHHHCCCEEEEEECCCCC-----------CCC--CCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEECHHHHHCCCCCE
Q ss_conf 998679699999256663-----------578--9998655309990674335447889970689997266773099923
Q 001586 321 NAHANGVKVVMATDLLAL-----------TIL--KPPGELGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRI 387 (1049)
Q Consensus 321 ~ah~~gal~iV~a~~~al-----------~~l--~~pg~~GaDivvgs~k~lg~P~~~GGP~~Gfl~~~~~l~~~lpgrl 387 (1049)
+||++|++++|+. .++- +.+ .....+|+|++++++++++ +||++.|+++++++..+.....+
T Consensus 231 la~~~g~~livD~-a~~~~~~~f~~~~~~~~~~~~~~~~~g~d~~~~s~~K~l----~~~~~~g~~~~~~~~~~~~~~~~ 305 (497)
T 3mc6_A 231 IAQKYKLPLHVDS-CLGSFIVSFMEKAGYKNLPLLDFRVPGVTSISCDTHKYG----FAPKGSSVIMYRNSDLRMHQYYV 305 (497)
T ss_dssp HHHHTTCCEEEET-TTTHHHHGGGTTTTCCSCCCCSTTSTTCCEEEEETTTTT----CCCSSCEEEECSSHHHHTTTSCC
T ss_pred HHHHHCCEEEEEC-CCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCHHHC----CCCCCCEEEEECCHHHHHHHHCC
T ss_conf 9998399799977-644566664443056677633356789718998952415----77888315886378887530102
Q ss_pred EEEEECCCCCCCEEEECCCCCCCCCCCCCCCCC-CCHHH--HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC-
Q ss_conf 334231899842166412222110002468774-30468--99999999999809110999999999999999999613-
Q 001586 388 VGVSIDSSGKPALRVAMQTREQHIRRDKATSNI-CTAQA--LLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKK- 463 (1049)
Q Consensus 388 vG~s~d~~g~~~~~l~lqtreqhirRekaTsni-ct~~a--l~a~~aa~y~~~lg~~Gl~~ia~~~~~~a~~l~~~L~~- 463 (1049)
. .+-.+.. -++.++ ++... ..+..++ +..++.+|++++.+++.++++++++.|.+
T Consensus 306 ~---~~~~~~~----------------~~~~~~~g~~~~~~~~a~~aa--l~~l~~~~~~~~~~~~~~~~~~l~~~L~~~ 364 (497)
T 3mc6_A 306 N---PAWTGGL----------------YGSPTLAGSRPGAIVVGCWAT--MVNMGENGYIESCQEIVGAAMKFKKYIQEN 364 (497)
T ss_dssp B---TTCTTSC----------------BCCSSSCSSCBHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred C---CCCCCCC----------------CCCCCCCCCCCCHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 6---6655777----------------678675637764269999999--999828789999999999999999999850
Q ss_pred CCCEEECCCCCCCEEEEECCC--HHHHHHHHHHCCCEEEEEC-CCEEEEEECCCCCHHHHHHHHHHHHC
Q ss_conf 998697499975569994399--9999999998697020005-99499994268999999999999939
Q 001586 464 LGTVEVQGLPFFDTVKVKCAD--AHAIASAAYKIEMNLRVVD-SNTVTASFDETTTLEDVDKLFIVFAG 529 (1049)
Q Consensus 464 ~G~~~v~~~~~~~~v~i~~~~--~~~v~~~L~~~Gi~~~~~~-~~~iris~~e~~t~edid~li~~l~~ 529 (1049)
+++++++..+....+.+..++ ..++.++|.++||.++... +..+|++++ .+|++|+|+++++|+.
T Consensus 365 ~~g~~~~~~~~~~~v~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~ri~~~-~~t~e~i~~~~~~L~~ 432 (497)
T 3mc6_A 365 IPDLDIMGNPRYSVISFSSKTLNIHELSDRLSKKGWHFNALQKPVALHMAFT-RLSAHVVDEICDILRT 432 (497)
T ss_dssp CTTCEECSCCCSSEEEEECTTTTHHHHHHHHHTTTCBCEECCSSCCEEEECC-TTTTCTHHHHHHHHHH
T ss_pred CCCEEEECCCCEEEEEEECCCCCHHHHHHHHHHCCEEEECCCCCCEEEEEEE-CCCHHHHHHHHHHHHH
T ss_conf 9998996688714899967998999999999968979866789976899985-8999999999999999
No 9
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=1.00 E-value=1 Score=240.06 Aligned_cols=399 Identities=13% Similarity=0.083 Sum_probs=251.2
Q ss_pred CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC---CCCCCCCCCCCCCCCCCCCHH
Q ss_conf 99755789988995347778999999999999306357674433542300367621---110333574665679999122
Q 001586 549 PSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNAT---TEMMPVTWPSFANIHPFAPAD 625 (1049)
Q Consensus 549 p~~~~~~~~~~~~p~~~~~~se~ei~~~l~~l~~~d~~~~~~~i~lGs~t~~~~~~---~~~~~~~~~~f~~~~P~~p~e 625 (1049)
|..++..-+ ..+| ..+.++.+++++++++...+.... +..+++......... .+++ ..+.+.+.++. +
T Consensus 71 p~~l~~~~~-~~~p--~~~~~~~~~~~~~~~~~~~~~~~~-~p~~~~~~~~~~~~~~~~~~~l----~~~~n~~~~~~-~ 141 (515)
T 2jis_A 71 PEELKQLLD-LELR--SQGESQKQILERCRAVIRYSVKTG-HPRFFNQLFSGLDPHALAGRII----TESLNTSQYTY-E 141 (515)
T ss_dssp HHHHHHHHC-CCCC--SSCCCHHHHHHHHHHHHHHSCCTT-STTEESSSCCCCCHHHHHHHHH----HHHHCCCTTCT-T
T ss_pred HHHHHHHCC-CCCC--CCCCCHHHHHHHHHHHHCCCCCCC-CCCEEEEEECCCCHHHHHHHHH----HHHHCCCCCCH-H
T ss_conf 799986445-6789--899999999999999961899899-9994777227998899999999----99865577864-4
Q ss_pred HHHCHHHHHHHHHHHHHHHHCCCCC-CCCCCCHHHHHHHHHHHHHHHH----HHCCC--CCCCEEEECCCCCCCCHHHHH
Q ss_conf 2111899999999999976299912-0025916999999999999999----96099--999899994999876498887
Q 001586 626 QAQGYQEMFNNLGEWLCTITGFDSF-SLQPNAGAAGEYAGLMVIRAYH----KARGD--HHRNVCIIPVSAHGTNPATAA 698 (1049)
Q Consensus 626 ~~~G~~~~~~el~~~lael~G~~~~-~l~~~sGa~ge~a~l~air~y~----~~~G~--~~r~~ILip~saHgt~pa~a~ 698 (1049)
.+++..+++.++++++++++|++.. .+..++|+.++..++.++|.+. ..+|. .++.+|+++..+|.++...+.
T Consensus 142 ~s~~~~~le~~~~~~la~l~g~~~~~~~~t~ggtea~~~al~~ar~~~~~~~~~~G~~~~~~~~vl~s~~~h~s~~~~~~ 221 (515)
T 2jis_A 142 IAPVFVLMEEEVLRKLRALVGWSSGDGIFCPGGSISNMYAVNLARYQRYPDCKQRGLRTLPPLALFTSKECHYSIQKGAA 221 (515)
T ss_dssp TCHHHHHHHHHHHHHHHHHHTCSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHHHHHH
T ss_pred HCHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHH
T ss_conf 46678999999999999984899988698588289999999999998755776427666678699978876189999999
Q ss_pred HCCC---EEEEECCCCCCCCCHHHHHHHHHHC---CCCEEEEEEECCC-CCCCCCCCHHHHHHHHHHCCCEEEEECCCCC
Q ss_conf 6597---9999918999998999999998805---9984899998489-6300133689999999980999999665632
Q 001586 699 MCGM---KIVSVGTDAKGNINIEELRKAAEAN---RDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMN 771 (1049)
Q Consensus 699 ~~G~---~Vv~V~~d~~g~iDle~L~~~i~k~---~~~ta~Vvit~Ps-~~G~i~~dI~eIa~ia~~~G~~l~vD~A~~~ 771 (1049)
..|+ +++.+|+++++.+|+++|++++++. ..++++|++++|+ .+|.++ |+++|+++|+++|+++|||+|+..
T Consensus 222 ~~g~g~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i~-~l~~I~~la~~~g~~l~vD~a~~~ 300 (515)
T 2jis_A 222 FLGLGTDSVRVVKADERGKMVPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAFD-PLEAIADVCQRHGLWLHVDAAWGG 300 (515)
T ss_dssp HTTSCGGGEEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBC-CHHHHHHHHHHHTCEEEEEETTGG
T ss_pred HCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCC-CHHHHHHHHHHCCCEEEEEHHHHH
T ss_conf 7599988389986499986989999999999996899747999968999987856-799999999983996998553256
Q ss_pred CCCCCC-----CCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEEECCC--CCCC----CCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 224767-----9876677599818974235678888895057777433--2364----9999643478999988788888
Q 001586 772 AQVGLT-----SPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH--LAPF----LPSHPVVSTGGIPAPEKSQPLG 840 (1049)
Q Consensus 772 a~~gl~-----~Pg~~GaDiv~~s~hKtl~~p~g~GGPg~G~i~~~~~--l~~~----lp~~~vg~~~~~~~~~~~~~~~ 840 (1049)
...... ..+..++|++++|+||+|+.| .|+|++++++. +.+. .+....+...+.. ......+.
T Consensus 301 ~~~~~~~~~~~~~g~~~aD~v~~s~hK~l~~p-----~g~G~l~~~~~~~~~~~~~~~~~~yl~~~~~~~~-~~~~~~~~ 374 (515)
T 2jis_A 301 SVLLSQTHRHLLDGIQRADSVAWNPHKLLAAG-----LQCSALLLQDTSNLLKRCHGSQASYLFQQDKFYD-VALDTGDK 374 (515)
T ss_dssp GGGGCTTTGGGGTTGGGCSEEEECTTSTTCCC-----SCCEEEEESCCSCHHHHHHCC---------CCSC-GGGCCGGG
T ss_pred HHHHCHHHHHHCCCCCCCCEEEECCCCCCCCC-----CCEEEEEEECHHHHHHHHHCCCCHHCCCCCCCCC-CCCCCCCC
T ss_conf 88859423865379865898998750025998-----7736788847388999874489600167765656-65787888
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCC--CCEEECCCCCCEEEEEEEECCCCC-CC--
Q ss_conf 8784101347899999999999764229999999999999999998400--990012688840148999656753-45--
Q 001586 841 TIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEFIVDLRGLK-NT-- 915 (1049)
Q Consensus 841 ~i~sa~~g~~~~l~~a~a~l~~lG~eGl~~~~~~~~~~a~~L~~~L~~~--~~i~~~g~~~~~~~e~iv~~~~~~-~~-- 915 (1049)
.+. .+....+...|+.++.+|.+|+.+..++...+++++.++|+++ ++++ ++ +....++|...+-. ..
T Consensus 375 ~~~---~~rr~~al~~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~--~~--~~~~~v~f~~~p~~~~~~~ 447 (515)
T 2jis_A 375 VVQ---CGRRVDCLKLWLMWKAQGDQGLERRIDQAFVLARYLVEEMKKREGFELV--ME--PEFVNVCFWFVPPSLRGKQ 447 (515)
T ss_dssp CSC---SSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEES--SC--CSSSEEEEEECCGGGTTCT
T ss_pred CCC---CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE--CC--CCEEEEEEEEECCCCCCCC
T ss_conf 888---8885209999999999849999999999999999999997338997996--79--8705999998575434433
Q ss_pred CCCCH--------HHHHHHHHHCCCCCCCC-CCC-CCCEEEEEC-CCCCCHHHHHHHHHHHHHHHH
Q ss_conf 89999--------99999999789604788-889-899899981-688999999999999999999
Q 001586 916 AGIEP--------EDVAKRLMDYGFHGPTM-SWP-VPGTLMIEP-TESESKEELDRYCDALISIRE 970 (1049)
Q Consensus 916 ~gi~~--------~~iak~L~~~Gi~~~~~-~~p-~~~~lri~~-t~~~t~eeid~fi~aL~~i~~ 970 (1049)
...+. ..+.++|.+.|+..... .++ ..+.+|+++ ++.++++|+|+++++|+++.+
T Consensus 448 ~~~~~~~~l~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~lRis~~~~~~t~edid~~~~~l~~~~~ 513 (515)
T 2jis_A 448 ESPDYHERLSKVAPVLKERMVKEGSMMIGYQPHGTRGNFFRVVVANSALTCADMDFLLNELERLGQ 513 (515)
T ss_dssp TSTTHHHHHHTHHHHHHHHHHHHTSCEEEEEEETTEEEEEEEECCCTTCCHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHH
T ss_conf 434679999999999999999659799997798896389999928999999999999999999995
No 10
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=1.00 E-value=1 Score=236.44 Aligned_cols=389 Identities=14% Similarity=0.092 Sum_probs=251.4
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC--C-CCCCCCCCCCCCCCCCCCCCHHHHHCHHHHHH
Q ss_conf 89953477789999999999993063576744335423003676--2-11103335746656799991222111899999
Q 001586 559 LTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLN--A-TTEMMPVTWPSFANIHPFAPADQAQGYQEMFN 635 (1049)
Q Consensus 559 ~~~p~~~~~~se~ei~~~l~~l~~~d~~~~~~~i~lGs~t~~~~--~-~~~~~~~~~~~f~~~~P~~p~e~~~G~~~~~~ 635 (1049)
+.+| ..+.+++++++++.++...+..+.+ ..++|......+ . ..+++...+ +.+.+.. +.+++..+++.
T Consensus 67 ~~~p--~~~~~~~~~~~~~~~~~~~~~~~~~-p~f~~~~~~~~~~~~~~~e~l~~~~----~~~~~~~-~~~p~~~~le~ 138 (511)
T 3vp6_A 67 LELS--DHPESLEQILVDCRDTLKYGVRTGH-PRFFNQLSTGLDIIGLAGEWLTSTA----NTNMFTY-EIAPVFVLMEQ 138 (511)
T ss_dssp CCCC--SSCCCHHHHHHHHHHHHHTSCCTTS-TTEESSSSCCCCHHHHHHHHHHHHH----CCCSSCT-TTCHHHHHHHH
T ss_pred CCCC--CCCCCHHHHHHHHHHHHHCCCCCCC-CCCEEEECCCCCHHHHHHHHHHHHH----CCCCCCC-CCCCHHHHHHH
T ss_conf 9999--8999999999999998654477899-9815864699868999999999874----5677770-22803899999
Q ss_pred HHHHHHHHHHCCCC---CCCCCCCHHHHHHHHHHHHHHHH----HHCCC--CCCCEEEECCCCCCCCHHHHHHCCC---E
Q ss_conf 99999997629991---20025916999999999999999----96099--9998999949998764988876597---9
Q 001586 636 NLGEWLCTITGFDS---FSLQPNAGAAGEYAGLMVIRAYH----KARGD--HHRNVCIIPVSAHGTNPATAAMCGM---K 703 (1049)
Q Consensus 636 el~~~lael~G~~~---~~l~~~sGa~ge~a~l~air~y~----~~~G~--~~r~~ILip~saHgt~pa~a~~~G~---~ 703 (1049)
++.+|+++++|.+. ..+...+|+.++..++++++... ..+|. .++++|+++..+|.++...+...|+ +
T Consensus 139 ~~~~~l~~~~g~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~G~~~~~~~~v~~s~~~H~s~~~~~~~~g~g~~~ 218 (511)
T 3vp6_A 139 ITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYSIKKAGAALGFGTDN 218 (511)
T ss_dssp HHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTHHHHHCGGGSCCEEEEEETTSCTHHHHHHHHTTSCGGG
T ss_pred HHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCC
T ss_conf 99999999838998788069898459999999999998742366653766688738998797369999999985999774
Q ss_pred EEEECCCCCCCCCHHHHHHHHHHC---CCCEEEEEEECCCC-CCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCC
Q ss_conf 999918999998999999998805---99848999984896-30013368999999998099999966563222476798
Q 001586 704 IVSVGTDAKGNINIEELRKAAEAN---RDNLSTLMVTYPST-HGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSP 779 (1049)
Q Consensus 704 Vv~V~~d~~g~iDle~L~~~i~k~---~~~ta~Vvit~Ps~-~G~i~~dI~eIa~ia~~~G~~l~vD~A~~~a~~gl~~P 779 (1049)
++.+++++++.+|+++|++++++. +..+.+|++++|++ +|.++ |+++|+++|+++|+++|||+|+..+. +..|
T Consensus 219 ~~~v~~d~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~vd-~l~~I~~ia~~~~~~lhvD~a~~~~~--~~~~ 295 (511)
T 3vp6_A 219 VILIKCNERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFD-PIQEIADICEKYNLWLHVDAAWGGGL--LMSR 295 (511)
T ss_dssp EEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCSSSCCBC-CHHHHHHHHHHHTCEEEEEETTGGGG--GGCT
T ss_pred EEEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCC-CHHHHHHHHHHCCCEEEEECCCHHHH--HHCH
T ss_conf 79960587776299999999998886699847999956888885440-29999999998599899985124567--6490
Q ss_pred -------CCCCCCEEEECCCCCCCCCCCCCCCCEEEEEECCC-CCCC----CCCCCCCCCCCC-CCC-CCCCCCCCCCCC
Q ss_conf -------76677599818974235678888895057777433-2364----999964347899-998-878888887841
Q 001586 780 -------GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH-LAPF----LPSHPVVSTGGI-PAP-EKSQPLGTIAAA 845 (1049)
Q Consensus 780 -------g~~GaDiv~~s~hKtl~~p~g~GGPg~G~i~~~~~-l~~~----lp~~~vg~~~~~-~~~-~~~~~~~~i~sa 845 (1049)
|..++|++++++||+|+.|. +.|++++++. +... .+.......... ... ...+... ++.
T Consensus 296 ~~~~~~~g~~~aDsv~~~~hK~l~~p~-----g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~--~~r 368 (511)
T 3vp6_A 296 KHRHKLNGIERANSVTWNPHKMMGVLL-----QCSAILVKEKGILQGCNQMHASYLFQQDKHYDVSYDTGDKAIQ--CGR 368 (511)
T ss_dssp TTGGGGTTGGGCSEEEECTTSTTCCCS-----CCEEEEESSTTHHHHHHCCCCTTTCCSSCSSCGGGCCGGGSSC--SSC
T ss_pred HHHHHCCCCCCCCEEEECCCCCCCCCC-----CEEEEEEECHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC--CCC
T ss_conf 104333687448889988400358986-----7699999388999988536974025766556665576677777--897
Q ss_pred CHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCC--CCEEECCCCCCEEEEEEEECCCCCCC-CCC----
Q ss_conf 01347899999999999764229999999999999999998400--99001268884014899965675345-899----
Q 001586 846 PWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEFIVDLRGLKNT-AGI---- 918 (1049)
Q Consensus 846 ~~g~~~~l~~a~a~l~~lG~eGl~~~~~~~~~~a~~L~~~L~~~--~~i~~~g~~~~~~~e~iv~~~~~~~~-~gi---- 918 (1049)
+ ..+...|++++.+|.+|+.+..++...+++++.+.|+++ ++++.+ ..+....+++.+.+.... .+.
T Consensus 369 ~----~~al~~~~al~~~g~~gl~~~~~~~~~~a~~l~~~L~~~pg~~l~~~--~~p~~~~v~f~~~p~~~~~~~~~~~~ 442 (511)
T 3vp6_A 369 H----VDIFKFWLMWKAKGTVGFENQINKCLELAEYLYAKIKNREEFEMVFN--GEPEHTNVCFWYIPQSLRGVPDSPQR 442 (511)
T ss_dssp C----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTEEESSS--SCCSSSCEEEEECCGGGSSCCCCHHH
T ss_pred C----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEC--CCCCEEEEEEEEECCCCCCCCCCHHH
T ss_conf 2----68999999999876999999999999999999999856898799865--99976899999867522445554567
Q ss_pred ------CHHHHHHHHHHCCCCCCCCCC-CC-CCEEEEEC-CCCCCHHHHHHHHHHHHHHHHH
Q ss_conf ------999999999978960478888-98-99899981-6889999999999999999999
Q 001586 919 ------EPEDVAKRLMDYGFHGPTMSW-PV-PGTLMIEP-TESESKEELDRYCDALISIREE 971 (1049)
Q Consensus 919 ------~~~~iak~L~~~Gi~~~~~~~-p~-~~~lri~~-t~~~t~eeid~fi~aL~~i~~~ 971 (1049)
...++.++|.++|+......+ +. .+.+|+++ +..++.+|||+++++|+++.+.
T Consensus 443 ~~~l~~~~~~l~~~L~~~G~~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~ll~~i~~~~~~ 504 (511)
T 3vp6_A 443 REKLHKVAPKIKALMMESGTTMVGYQPQGDKANFFRMVISNPAATQSDIDFLIEEIERLGQD 504 (511)
T ss_dssp HHHHHHHHHHHHHHHHHHTSCEEEEEEETTEEEEEEECCCCTTCCHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHHHCCCEEEEEEEECCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 88899999999999995697999978848962899999169999999999999999999776
Done!