Query 001595
Match_columns 1048
No_of_seqs 343 out of 802
Neff 4.9
Searched_HMMs 29240
Date Tue Mar 26 17:12:41 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/001595.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_891-895//hhsearch_pdb/001595hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ox0_A JMJC domain-containing 1.0 1 1 702.1 18.6 322 28-431 32-354 (381)
2 3opt_A DNA damage-responsive t 1.0 1 1 677.8 12.7 337 29-418 11-367 (373)
3 3dxt_A JMJC domain-containing 1.0 1 1 675.6 17.4 322 28-431 14-336 (354)
4 3avr_A Lysine-specific demethy 1.0 1 1 460.3 19.7 287 239-555 225-524 (531)
5 4ask_A Lysine-specific demethy 1.0 1 1 417.5 21.9 284 245-556 206-500 (510)
6 2xxz_A Lysine-specific demethy 1.0 1 1 356.6 10.4 160 239-407 166-330 (332)
7 2wzo_A Transforming growth fac 1.0 1 1 313.2 12.6 143 795-950 2-145 (146)
8 2ypd_A Probable JMJC domain-co 1.0 1 1 70.4 9.0 104 303-406 234-344 (392)
9 3kv4_A PHD finger protein 8; e 1.0 1 1 66.8 15.4 148 272-435 234-384 (447)
10 3k3o_A PHF8, PHD finger protei 1.0 1 1 65.6 14.4 148 271-434 149-299 (371)
No 1
>2ox0_A JMJC domain-containing histone demethylation PROT; double-stranded beta helix, demethylase, oxygenase, SGC, STR genomics, structural genomics consortium, oxidoreductase; HET: MLY ALY OGA; 1.95A {Homo sapiens} PDB: 2oq7_A* 2os2_A* 2ot7_A* 2oq6_A* 2vd7_A* 2ybk_A* 2ybp_A* 2ybs_A* 3njy_A* 3pdq_A* 3u4s_A* 2p5b_A* 2q8c_A* 2q8d_A* 2q8e_A* 2gp5_A* 2gp3_A* 2wwj_A* 2pxj_A* 2xml_A*
Probab=1.00 E-value=1 Score=702.13 Aligned_cols=322 Identities=35% Similarity=0.628 Sum_probs=279.5
Q ss_pred CCCCCCCCCCCHHHHHCHHHHHHHHHHH-HHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCHHH
Q ss_conf 9999986689977542799999998974-220491488399999999978433323346544540113310025520222
Q 001595 28 IIDEAPVFYPTVEEFEDTLGYIAKIRSK-AESFGICRIVPPSSWTPPCPLKAKNIWENAKFSTRIQQIDLLQNREPMRKK 106 (1048)
Q Consensus 28 ~i~e~PVF~PT~EEFkDPl~YIekIr~~-AekYGICKIVPP~sWkPp~~l~~k~i~~~~~F~tRvQ~I~~lq~r~p~~k~ 106 (1048)
.-.++||||||+|||+||++||++|+++ |++|||||||||++|+|++.+++ +++++|++++|++...+.+..
T Consensus 32 ~~~~iPVF~PT~EEF~Df~~YI~kIe~~gA~~~GI~KIIPP~~W~p~~~~~~---~~~~~i~~piqQ~~~g~~g~~---- 104 (381)
T 2ox0_A 32 PSARIMTFYPTMEEFRNFSRYIAYIESQGAHRAGLAKVVPPKEWKPRASYDD---IDDLVIPAPIQQLVTGQSGLF---- 104 (381)
T ss_dssp TTCCCEEECCCHHHHSCHHHHHHHHHHTTGGGGSEEEECCCTTCCSCSCSTT---CTTCEESSCEEEEEEEETTEE----
T ss_pred CCCCCCEECCCHHHHHCHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCH---HHHCCCCCCCEEEECCCCCCC----
T ss_conf 9998746827999975999999999755666568610337756787555221---642425776135515887653----
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
Q ss_conf 23455321012334655568898643332334655443128987999999999998885607999977776776655567
Q 001595 107 IRSRKRKRRRQSRMGSTRRNANSSSEANAAETDEKFGFQSGPDLTLEGFQKYAQNFKECYFGMNDSKEDVKSDGFEHKRL 186 (1048)
Q Consensus 107 ~~~~k~k~~~~~~~~~~~r~~~s~s~~~~~~~~e~fgF~~g~~~tL~~F~~~A~~fk~~~f~~~~~~~~~~~~~~~~~~~ 186 (1048)
..|+++ ++.|||++|+++|+.++.+ .+ .
T Consensus 105 ---------------------------------~~~~~~-~k~~tl~~f~~~a~~~~~~---~p---------------~ 132 (381)
T 2ox0_A 105 ---------------------------------TQYNIQ-KKAMTVREFRKIANSDKYC---TP---------------R 132 (381)
T ss_dssp ---------------------------------EEEEEE-CCCEEHHHHHHHHHSTTTS---CC---------------C
T ss_pred ---------------------------------CCCCCC-CCCCCHHHHHHHHCCCCCC---CC---------------C
T ss_conf ---------------------------------334564-4335899999985213447---87---------------6
Q ss_pred CCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 98877789995420069998200001678899877799789899999983012201688778989999996445599888
Q 001595 187 EPSVVDIEGEYWRIIERPTDEVEVYYGADLETGAFASGFPKASSLGTESDLDQYAMSGWNLNNLPRLPGSVLAFEGSDIS 266 (1048)
Q Consensus 187 ~ps~e~iE~eyWr~V~~~~~~veV~YGaDl~ss~~GSgFp~~~~~~~~~~~~~y~~~~WNLnnLp~l~gSLL~~~~~~I~ 266 (1048)
.++.+++|++|||+|+. ++|+||||++++.|+++ .++|||+|||.+.++||++.+.+|+
T Consensus 133 ~~~~~~lE~~fWr~v~~----~~~~YgaD~~gS~f~~~-----------------~~~WNL~~Lp~ll~~ll~~~~~~I~ 191 (381)
T 2ox0_A 133 YSEFEELERKYWKNLTF----NPPIYGADVNGTLYEKH-----------------VDEWNIGRLRTILDLVEKESGITIE 191 (381)
T ss_dssp CSSHHHHHHHHHHHTTS----SCCEEEEEEECCCSCTT-----------------CCSSCTTCCCCGGGHHHHHHCCCCB
T ss_pred CCCHHHHHHHHHHHCCC----CCCEEECCCCCCCCCCC-----------------CCCCCHHHHHHHHHHHHHHCCCCCC
T ss_conf 67788999999864776----88612147776557789-----------------9978153256677788875388787
Q ss_pred CCCCCEEEEECCCCCCCCCCCCCCCEEEEEEEECCCEEEEEECCCCHHHHHHHHHHHCCHHHCCCCHHHHHCCCCCCHHH
Q ss_conf 86323598414666444301586521013443088410897167308999999997373112049011100113569132
Q 001595 267 GVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHASTLEKAMRKHLPDLFEEQPDLLHELVTQLSPSV 346 (1048)
Q Consensus 267 GVttP~LYiGM~fStf~WH~ED~~LySINYlH~GapK~WY~VP~~~~~kfE~llk~~~p~lf~~~p~~L~h~~~~isP~~ 346 (1048)
|||+||||+||+||+||||+||++||||||+|+|+||+||+||++++++||++|++.+|+++..|++||+|+++|++|+.
T Consensus 192 GVn~P~LYiGm~~S~f~WH~ED~~L~SINYlH~GapK~WY~VP~~~~~kfE~l~~~~~P~~~~~~~~~L~h~~~~isP~~ 271 (381)
T 2ox0_A 192 GVNTPYLYFGMWKTSFAWHTEDMDLYSINYLHFGEPKSWYSVPPEHGKRLERLAKGFFPGSAQSCEAFLRHKMTLISPLM 271 (381)
T ss_dssp TTTSCEEEEECTTCEEEEECCGGGCEEEEEEEEESCEEEEEECGGGHHHHHHHHHHHSHHHHHHCTTGGGGSCEEECHHH
T ss_pred CCCCCEEEEECCCCCCCCEECCCCCEEEEEEECCCCEEEEECCHHHHHHHHHHHHHHCHHHHHCCHHHHHCCCCCCCHHH
T ss_conf 86554387414566767331488652567863488638996388999999999998673544205577635540459999
Q ss_pred HHHCCCCEEEEECCCCCEEEECCCCEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
Q ss_conf 75169981674217991999848850132116643034322355314536999999998414989874789999999999
Q 001595 347 LKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLAHGQQAVELYSEQHRKTSLSHDKLLFGSVQAA 426 (1048)
Q Consensus 347 L~~~GIpv~r~vQ~pGEFVVTfP~aYHsgfn~GfN~aEAVNFA~~dWL~~g~~a~e~y~~~~r~~~fS~d~LL~~~A~~~ 426 (1048)
|+++||||++++|+|||||||||+|||+|||+||||+||||||+++|+++|..|.++++. .....++|+.++-+. +..
T Consensus 272 L~~~GIpv~r~vQ~pGEfViTfP~aYH~gfn~GfN~aEAvNFA~~~Wl~~g~~a~~c~c~-~~~v~i~~d~~~~~~-~~~ 349 (381)
T 2ox0_A 272 LKKYGIPFDKVTQEAGEFMITFPYGYHAGFNHGFNCAESTNFATRRWIEYGKQAVLCSCR-KDMVKISMDVFVRKF-QPE 349 (381)
T ss_dssp HHHTTCCCEEEEECTTCEEEECTTCEEEEEECSSEEEEEEEECCTTHHHHHHHCCCCCSS-TTCCCCCCHHHHHHH-CGG
T ss_pred HHHCCCCEEEEEECCCCEEEECCCCEEEEECCCCCHHHHHCCCCHHHHHHHHHHHHCCCC-CCCEEECHHHHHHHH-CHH
T ss_conf 987799648987569988998887378764276238777524737788876766525565-773131499999873-838
Q ss_pred HHHHH
Q ss_conf 99988
Q 001595 427 IKALW 431 (1048)
Q Consensus 427 ~~~l~ 431 (1048)
.+.+|
T Consensus 350 ~~~~w 354 (381)
T 2ox0_A 350 RYKLW 354 (381)
T ss_dssp GHHHH
T ss_pred HHHHH
T ss_conf 88898
No 2
>3opt_A DNA damage-responsive transcriptional repressor R; RPH1, histone demethylase, catalytic core, oxidoreductase; HET: DNA AKG; 2.20A {Saccharomyces cerevisiae} PDB: 3opw_A*
Probab=1.00 E-value=1 Score=677.79 Aligned_cols=337 Identities=31% Similarity=0.585 Sum_probs=270.3
Q ss_pred CCCCCCCCCCHHHHHCHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCC-CCCCCCCCCCCCCCHHH-------HHHCCC
Q ss_conf 9999866899775427999999989742204914883999999999784-33323346544540113-------310025
Q 001595 29 IDEAPVFYPTVEEFEDTLGYIAKIRSKAESFGICRIVPPSSWTPPCPLK-AKNIWENAKFSTRIQQI-------DLLQNR 100 (1048)
Q Consensus 29 i~e~PVF~PT~EEFkDPl~YIekIr~~AekYGICKIVPP~sWkPp~~l~-~k~i~~~~~F~tRvQ~I-------~~lq~r 100 (1048)
.++|||||||+|||+||.+||++|+++|+++||||||||++|+|++... ..+.+++++++++||++ ..+||.
T Consensus 11 ~~~~pVF~PT~eeF~dF~~yi~~i~~~g~~~Gi~KVIPPkeW~~~~~~~~~~~~l~~~~i~~PI~Q~~~G~~G~~~~~ni 90 (373)
T 3opt_A 11 VGGVPVFKPTYEQFEDFYAYCKAINKYGMKSGVVKVIPPKEWKDKLDLPYSAETLQKIKIKSPIQQHISGNKGLFMVQNV 90 (373)
T ss_dssp ESSSEEECCCHHHHTCHHHHHHTTHHHHTTSSEEEECCCHHHHTTSCSSCCHHHHHHCEEESCEEEEEEESSSEEEEEEE
T ss_pred CCCCCEECCCHHHHHCHHHHHHHHHHHCCCCCEEEEECCHHHHHCCCCCCCHHHHHCCCCCCCCEEEECCCCCEEEEEEE
T ss_conf 59987357799998699999999987341168578857544422145787676895073799817985389725888640
Q ss_pred CCCHHHHHHHH------------HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHC
Q ss_conf 52022223455------------321012334655568898643332334655443128987999999999998885607
Q 001595 101 EPMRKKIRSRK------------RKRRRQSRMGSTRRNANSSSEANAAETDEKFGFQSGPDLTLEGFQKYAQNFKECYFG 168 (1048)
Q Consensus 101 ~p~~k~~~~~k------------~k~~~~~~~~~~~r~~~s~s~~~~~~~~e~fgF~~g~~~tL~~F~~~A~~fk~~~f~ 168 (1048)
+..+++...++ +++|+..+.+...+.. ..... ..+..+++++|++++..++.+
T Consensus 91 e~~r~~~~~q~k~l~~~~~~p~~~~~~~~~~~~~~~~~~------~~~~~------~~~~~~~~~~~~~~~~~~~~~--- 155 (373)
T 3opt_A 91 EKNKTYNIIQWKDLSKDYVPPEDPKARRNSRKGSVSKST------KLKLK------NFESSFNIDDFEQFRTEYTID--- 155 (373)
T ss_dssp ECSCEEEHHHHHHHTTSSCCCCC------------------------------------CCCCHHHHHHHTTTSSCC---
T ss_pred CCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC------CCCCC------CCCCCCCHHHHHHHHHHHCCC---
T ss_conf 025666789998765511787544432224566666433------33223------344432267889988760644---
Q ss_pred CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCC
Q ss_conf 99997777677665556798877789995420069998200001678899877799789899999983012201688778
Q 001595 169 MNDSKEDVKSDGFEHKRLEPSVVDIEGEYWRIIERPTDEVEVYYGADLETGAFASGFPKASSLGTESDLDQYAMSGWNLN 248 (1048)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~ps~e~iE~eyWr~V~~~~~~veV~YGaDl~ss~~GSgFp~~~~~~~~~~~~~y~~~~WNLn 248 (1048)
. ++.. .+++.++||++||++|.. .+|+||||+ .||+||.. .++|||+
T Consensus 156 ---~-----~~~~----~~~~~~~lE~~yW~~~~~----~~p~YgaD~----~GS~F~~~-------------~~~WNL~ 202 (373)
T 3opt_A 156 ---L-----SDFQ----NTERLKFLEEYYWKTLNF----TTPMYGADT----PGSIFPEG-------------LNVWNVA 202 (373)
T ss_dssp ---C-----TTSS----CHHHHHHHHHHHHHTTTT----SCCEEEEEE----ECCCSCTT-------------CCSSCTT
T ss_pred ---H-----HHCC----CCCHHHHHHHHHHHHCCC----CCCEEECCC----CCCCCCCC-------------CCCCCHH
T ss_conf ---5-----5516----720599999999875567----886675489----88776899-------------8865854
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEEEECCCEEEEEECCCCHHHHHHHHHHHCCHHH
Q ss_conf 98999999644559988886323598414666444301586521013443088410897167308999999997373112
Q 001595 249 NLPRLPGSVLAFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHASTLEKAMRKHLPDLF 328 (1048)
Q Consensus 249 nLp~l~gSLL~~~~~~I~GVttP~LYiGM~fStf~WH~ED~~LySINYlH~GapK~WY~VP~~~~~kfE~llk~~~p~lf 328 (1048)
||| +||++++.+|+|||+||||+||+||+||||+||++||||||+|+|+||+||+||++++++||++|++.+|+++
T Consensus 203 ~Lp----~lL~~l~~~I~GVntP~LYvGm~~Stf~WH~ED~~L~SINYlH~GapK~WY~VP~~~~~kfE~l~k~~~p~~~ 278 (373)
T 3opt_A 203 KLP----NILDHMETKVPGVNDSYLYAGLWKASFSWHLEDQDLYSINYIHFGAPKQWYSIPQEDRFKFYKFMQEQFPEEA 278 (373)
T ss_dssp SCC------------------CCEEEEECTTCEEEEECCGGGCEEEEEEEEESCEEEEECCGGGHHHHHHHHHHSSHHHH
T ss_pred HHH----HHHHHHCCCCCCCCHHHEEECCCCCCCCEEECCCCCEEEEEEECCCCEEEEEECHHHHHHHHHHHHHHCHHHH
T ss_conf 514----5888742667985531066526567865131488453677763288708999488999999999998671544
Q ss_pred CCCCHHHHHCCCCCCHHHHHHCCCCEEEEECCCCCEEEECCCCEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHCC
Q ss_conf 04901110011356913275169981674217991999848850132116643034322355314536999999998414
Q 001595 329 EEQPDLLHELVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLAHGQQAVELYSEQH 408 (1048)
Q Consensus 329 ~~~p~~L~h~~~~isP~~L~~~GIpv~r~vQ~pGEFVVTfP~aYHsgfn~GfN~aEAVNFA~~dWL~~g~~a~e~y~~~~ 408 (1048)
..|++||+|+++|++|+.|+++||||++++|+|||||||||+|||+|||+||||+||||||+++||++|+.|..|.+. .
T Consensus 279 ~~c~~fL~h~~~lisP~~L~~~GIpv~r~vQ~pGEfViTfP~aYH~gfn~Gfn~aEAvNFA~~~Wl~~g~~a~~C~C~-~ 357 (373)
T 3opt_A 279 KNCPEFLRHKMFLASPKLLQENGIRCNEIVHHEGEFMITYPYGYHAGFNYGYNLAESVNFALEEWLPIGKKAGKCHCI-S 357 (373)
T ss_dssp SSCSSCTTTSCEEECHHHHHTTTCCCEEEEECTTCEEEECTTCCEEEEESSSEEEEEEEECCC-----------------
T ss_pred HHCHHHHHCCCCCCCHHHHHHCCCCEEEEEECCCCEEEECCCCEEEEEECCCCHHHHHCCCCHHHHHHHCCCCCCCCC-C
T ss_conf 307788617755589999986699628988779978998788358898667229888744837778762517657355-8
Q ss_pred CCCCCCHHHH
Q ss_conf 9898747899
Q 001595 409 RKTSLSHDKL 418 (1048)
Q Consensus 409 r~~~fS~d~L 418 (1048)
..--|++++|
T Consensus 358 d~v~i~~~~~ 367 (373)
T 3opt_A 358 DSVEIDVKKL 367 (373)
T ss_dssp ----------
T ss_pred CCCEECHHHH
T ss_conf 8520069999
No 3
>3dxt_A JMJC domain-containing histone demethylation PROT; JMJD2D, histone demethylase, H3K9, jumonji domain-CONT protein 2D, oxidoreductase; 1.80A {Homo sapiens} PDB: 3dxu_A* 4hon_A* 4hoo_A 2w2i_A*
Probab=1.00 E-value=1 Score=675.65 Aligned_cols=322 Identities=34% Similarity=0.604 Sum_probs=277.5
Q ss_pred CCCCCCCCCCCHHHHHCHHHHHHHHHHH-HHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCHHH
Q ss_conf 9999986689977542799999998974-220491488399999999978433323346544540113310025520222
Q 001595 28 IIDEAPVFYPTVEEFEDTLGYIAKIRSK-AESFGICRIVPPSSWTPPCPLKAKNIWENAKFSTRIQQIDLLQNREPMRKK 106 (1048)
Q Consensus 28 ~i~e~PVF~PT~EEFkDPl~YIekIr~~-AekYGICKIVPP~sWkPp~~l~~k~i~~~~~F~tRvQ~I~~lq~r~p~~k~ 106 (1048)
...++||||||+|||+||.+||++|+++ |+++||||||||++|+|+..++ ++ +++.+++++|++...+.+...
T Consensus 14 ~~~~ipvF~PT~eEF~df~~Yi~~ie~~Ga~~~Gi~KIIPP~~W~~r~~~~--~~-~~~~i~~pi~q~~~g~~G~~~--- 87 (354)
T 3dxt_A 14 PNCNIMIFHPTKEEFNDFDKYIAYMESQGAHRAGLAKIIPPKEWKARETYD--NI-SEILIATPLQQVASGRAGVFT--- 87 (354)
T ss_dssp TTCCCEEECCCTTGGGCHHHHHHHHHHTTGGGGSEEEECCCTTCCSSSCST--TC-TTCEESSCEEEEEEEETTEEE---
T ss_pred CCCCCCEECCCHHHHHCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC--CH-HCCCCCCCCEEEECCCCCEEE---
T ss_conf 999864366899997699999999985655425850124741036764413--05-225236871555348984577---
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
Q ss_conf 23455321012334655568898643332334655443128987999999999998885607999977776776655567
Q 001595 107 IRSRKRKRRRQSRMGSTRRNANSSSEANAAETDEKFGFQSGPDLTLEGFQKYAQNFKECYFGMNDSKEDVKSDGFEHKRL 186 (1048)
Q Consensus 107 ~~~~k~k~~~~~~~~~~~r~~~s~s~~~~~~~~e~fgF~~g~~~tL~~F~~~A~~fk~~~f~~~~~~~~~~~~~~~~~~~ 186 (1048)
+++ ...+.||+++|+++|+..+ |..+.
T Consensus 88 ----------------------------------~~~-~~~k~~t~~~f~~~a~~~~---~~~p~--------------- 114 (354)
T 3dxt_A 88 ----------------------------------QYH-KKKKAMTVGEYRHLANSKK---YQTPP--------------- 114 (354)
T ss_dssp ----------------------------------EEE-EECCCEEHHHHHHHHTSTT---TSCCC---------------
T ss_pred ----------------------------------EEE-ECCCCCCHHHHHHHHHHHH---CCCCC---------------
T ss_conf ----------------------------------722-0367557999999976633---06998---------------
Q ss_pred CCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 98877789995420069998200001678899877799789899999983012201688778989999996445599888
Q 001595 187 EPSVVDIEGEYWRIIERPTDEVEVYYGADLETGAFASGFPKASSLGTESDLDQYAMSGWNLNNLPRLPGSVLAFEGSDIS 266 (1048)
Q Consensus 187 ~ps~e~iE~eyWr~V~~~~~~veV~YGaDl~ss~~GSgFp~~~~~~~~~~~~~y~~~~WNLnnLp~l~gSLL~~~~~~I~ 266 (1048)
..+.+++|++||+.+... .|+||||++ ||+||.. .++|||+|||.++++||++.+.+|+
T Consensus 115 ~~~~~~lE~~fW~~~~~~----~p~YgaD~~----gS~F~~~-------------~~~WNL~~L~~~~~~Ll~~~~~~I~ 173 (354)
T 3dxt_A 115 HQNFEDLERKYWKNRIYN----SPIYGADIS----GSLFDEN-------------TKQWNLGHLGTIQDLLEKECGVVIE 173 (354)
T ss_dssp CSSHHHHHHHHHHHGGGC----CCEEEEEEE----CCCSCTT-------------CCSSCTTSSCCHHHHHHHHHCCCCC
T ss_pred CCCHHHHHHHHHHHCCCC----CCEEEECCC----CCCCCCC-------------CCHHHHHHCCCHHHHHHHHCCCCCC
T ss_conf 899899999986633468----860231478----7636888-------------5511054433236778751477778
Q ss_pred CCCCCEEEEECCCCCCCCCCCCCCCEEEEEEEECCCEEEEEECCCCHHHHHHHHHHHCCHHHCCCCHHHHHCCCCCCHHH
Q ss_conf 86323598414666444301586521013443088410897167308999999997373112049011100113569132
Q 001595 267 GVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHASTLEKAMRKHLPDLFEEQPDLLHELVTQLSPSV 346 (1048)
Q Consensus 267 GVttP~LYiGM~fStf~WH~ED~~LySINYlH~GapK~WY~VP~~~~~kfE~llk~~~p~lf~~~p~~L~h~~~~isP~~ 346 (1048)
|||+||||+||+||+||||+||++||||||+|+|+||+||+||++++++||++|++.+|+.++.|++||+|++++++|+.
T Consensus 174 GVntP~LYiGm~~Stf~WH~ED~~L~SINYlH~GapK~WY~VP~~~~~kfE~l~k~~~p~~~~~c~~fL~h~~~lisP~~ 253 (354)
T 3dxt_A 174 GVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHLGEPKTWYVVPPEHGQRLERLARELFPGSSRGCGAFLRHKVALISPTV 253 (354)
T ss_dssp CCCCCEEEEECTTCEEEEECCGGGCEEEEEEEEESCEEEEEECGGGHHHHHHHHHHHSHHHHHHCTTGGGGCCEEECHHH
T ss_pred CCCCEEEEECCCCCCCCCEECCCCCEEEEEEECCCCEEEEEECHHHHHHHHHHHHHHCCHHHHHCHHHHHCCCCCCCHHH
T ss_conf 75611065315367875140488555788875288608999388999999999998672122105788736754479999
Q ss_pred HHHCCCCEEEEECCCCCEEEECCCCEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
Q ss_conf 75169981674217991999848850132116643034322355314536999999998414989874789999999999
Q 001595 347 LKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLAHGQQAVELYSEQHRKTSLSHDKLLFGSVQAA 426 (1048)
Q Consensus 347 L~~~GIpv~r~vQ~pGEFVVTfP~aYHsgfn~GfN~aEAVNFA~~dWL~~g~~a~e~y~~~~r~~~fS~d~LL~~~A~~~ 426 (1048)
|+++||||++++|+|||||||||++||+|||+||||+||||||+++||++|+.|.++.+.. ....|++|.++-.. +..
T Consensus 254 L~~~GIpv~~~vQ~pGEfViTfP~aYH~gfn~Gfn~aEAvNFA~~~Wl~~g~~A~~C~C~~-~~v~i~~d~~~~~~-~~~ 331 (354)
T 3dxt_A 254 LKENGIPFNRITQEAGEFMVTFPYGYHAGFNHGFNCAEAINFATPRWIDYGKMASQCSCGE-ARVTFSMDAFVRIL-QPE 331 (354)
T ss_dssp HHHTTCCCEEEEECTTCEEEECTTCEEEEEESSSEEEEEEEECCGGGHHHHHHCCCCCSSS-CCCCHHHHHHHHHH-CHH
T ss_pred HHHCCCCEEEEEECCCCEEEECCCCEEEEEECCCCHHHHHCCCCHHHHHHHHHCCCCCCCC-CCCEECHHHHHHHH-CHH
T ss_conf 9877996189886799589988873677763651476754558677887623040363557-66336399998863-878
Q ss_pred HHHHH
Q ss_conf 99988
Q 001595 427 IKALW 431 (1048)
Q Consensus 427 ~~~l~ 431 (1048)
...+|
T Consensus 332 ~~~~w 336 (354)
T 3dxt_A 332 RYDLW 336 (354)
T ss_dssp HHHHH
T ss_pred HHHHH
T ss_conf 78887
No 4
>3avr_A Lysine-specific demethylase 6A; cupin superfamily, TRI/dimethyllysine demethylase, oxidoredu structural protein complex; HET: M3L OGA EDO; 1.80A {Homo sapiens} PDB: 3avs_A*
Probab=1.00 E-value=1 Score=460.29 Aligned_cols=287 Identities=18% Similarity=0.149 Sum_probs=221.6
Q ss_pred HHHCCCCCCCCCCC-----CCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEEEECCCEEEEEECCCCH
Q ss_conf 22016887789899-----9999644559988886323598414666444301586521013443088410897167308
Q 001595 239 QYAMSGWNLNNLPR-----LPGSVLAFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHA 313 (1048)
Q Consensus 239 ~y~~~~WNLnnLp~-----l~gSLL~~~~~~I~GVttP~LYiGM~fStf~WH~ED~~LySINYlH~GapK~WY~VP~~~~ 313 (1048)
.+....|||++||. ..||||+|++..|+|||+||||+||+||+||||+||++++||||||+|++|+||+||++++
T Consensus 225 ~w~~ql~el~kLP~~lr~~~~gslL~~~~~~I~Gvn~pqLYig~~gS~t~~H~E~~~l~SiNynhggg~~~Wy~VP~e~~ 304 (531)
T 3avr_A 225 KWKLQLHELTKLPAFVRVVSAGNLLSHVGHTILGMNTVQLYMKVPGSRTPGHQENNNFCSVNINIGPGDCEWFVVPEGYW 304 (531)
T ss_dssp TTHHHHHHGGGSCGGGCSSCTTCGGGGSCSCCBTTSSCEEEEECTTCEEEEECCGGGCEEEEEEEEESCEEEEEECGGGH
T ss_pred HHHHHHHHHHHCCHHHCCCCCCCHHHHCCCCCCCCCHHHEEEECCCCCCCCEECCCCCEEEEEECCCCCEEEEEECHHHH
T ss_conf 56999999875889770368644566368878886743357505755566454478451467530788748999678999
Q ss_pred HHHHHHHHHHCCHHHCCCCHHHHHCCCCCCHHHHHHCCCCEEEEECCCCCEEEECCCCEEEEECCCCCEEEEECCCCCCH
Q ss_conf 99999999737311204901110011356913275169981674217991999848850132116643034322355314
Q 001595 314 STLEKAMRKHLPDLFEEQPDLLHELVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDW 393 (1048)
Q Consensus 314 ~kfE~llk~~~p~lf~~~p~~L~h~~~~isP~~L~~~GIpv~r~vQ~pGEFVVTfP~aYHsgfn~GfN~aEAVNFA~~dW 393 (1048)
++||+++++...+ ++ +..+|++|+.|.++||||||++|+|||||||||||||||||+|||++||||||+++|
T Consensus 305 ~k~e~l~~k~~~~-------~~-~~~~~~~p~~L~~~gIPvyr~vQkpGd~Vi~~PgayH~v~n~G~~~n~awN~a~~~~ 376 (531)
T 3avr_A 305 GVLNDFCEKNNLN-------FL-MGSWWPNLEDLYEANVPVYRFIQRPGDLVWINAGTVHWVQAIGWCNNIAWNVGPLTA 376 (531)
T ss_dssp HHHHHHHHHTTCC-------TT-TSCBCCCHHHHHHTTCCCEEEEECTTCEEEECTTCEEEEEESSSEEEEEEEECCSSH
T ss_pred HHHHHHHHHCCCC-------HH-HCEEECCHHHHHHCCCCEEEEEECCCCEEEECCCCEEEEEECCEEEEEEEEECCCCH
T ss_conf 9999999973987-------21-144306889998679975999977898899899843788745345465787056866
Q ss_pred HHHHHHHHHHHH---HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCHHHHHHHHH-HHHHHHH
Q ss_conf 536999999998---414989874789999999999999886632013688872001001341257999999-9997783
Q 001595 394 LAHGQQAVELYS---EQHRKTSLSHDKLLFGSVQAAIKALWELSVLQKKTPGNRKWKDACGKDGVLTKAIKT-RVQMKKE 469 (1048)
Q Consensus 394 L~~g~~a~e~y~---~~~r~~~fS~d~LL~~~A~~~~~~l~e~~l~~k~~~~~~~~~~~c~~d~il~~~~k~-r~~~e~~ 469 (1048)
++++. |.+.|. ..+..++||+++|+|++|+.... .+.....+.+.|+.+ .++. +...+..
T Consensus 377 ~q~~~-A~e~y~~Nk~~~~~sivp~~~L~wn~a~~~~~----------~d~~l~~~ik~~L~r-----sl~~~~~~~~~l 440 (531)
T 3avr_A 377 CQYKL-AVERYEWNKLQSVKSIVPMVHLSWNMARNIKV----------SDPKLFEMIKYCLLR-----TLKQCQTLREAL 440 (531)
T ss_dssp HHHHH-HHHHHHHHHHHTCCCSSCHHHHHHHHHHHCCC----------CCHHHHHHHHHHHHH-----HHHHHHHHHHHH
T ss_pred HHHHH-HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHC----------CCHHHHHHHHHHHHH-----HHHHHHHHHHHH
T ss_conf 77999-99999986440578878889999998865502----------669999999999999-----999999999999
Q ss_pred HCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC----CCCCCCCCCCHHHHCCCCCCCEEEEEECCHHHHH
Q ss_conf 104683134441001235885663355443211101112443----5783200133222159999960899973999999
Q 001595 470 GLQKLPSYFKLQKMEIDFDLKTERECFSCFYDLHLSAAGCKC----SPDRFACLKHANIFCSCEIDHRFVILRYSTDELN 545 (1048)
Q Consensus 470 ~~~~l~~~~~~~k~~~~~d~~~er~C~~Ck~~lfLS~V~C~C----~~~~~~CL~Ha~~lCsC~~~~~~llyRYt~~EL~ 545 (1048)
....+...+. .....++.+.|..|+.+||++.+.|.. ....++|++|+...|.| .++.++++||+++||.
T Consensus 441 ~~~g~~i~~~-----~~~~~~~~~~C~~C~~~lFn~~~v~~~~~~~~~~~v~C~~Ca~~~~~~-l~~~~v~~ry~~eeL~ 514 (531)
T 3avr_A 441 IAAGKEIIWH-----GRTKEEPAHYCSICEVEVFDLLFVTNESNSRKTYIVHCQDCARKTSGN-LENFVVLEQYKMEDLM 514 (531)
T ss_dssp HHTTCCEEEC-----CCCTTCCCEECTTTCCEECSEEEEEECTTCSSEEEEECHHHHHHHCTT-CTTCEEEECSCHHHHH
T ss_pred HHCCCEEEEC-----CCCCCCCCEECCCCCHHHEEEEEEEECCCCCCCCCCCCHHHHHHCCCC-CCCEEEEEECCHHHHH
T ss_conf 8679778764-----656788881622261121211778725777787883986446304835-0454899975899999
Q ss_pred HHHHHHHHCH
Q ss_conf 9999998110
Q 001595 546 TLVEALEGGL 555 (1048)
Q Consensus 546 ~lv~~le~~~ 555 (1048)
.++++|....
T Consensus 515 ~~yd~f~~~~ 524 (531)
T 3avr_A 515 QVYDQFTLAP 524 (531)
T ss_dssp HHHHTCCCCC
T ss_pred HHHHHEEECC
T ss_conf 9997547357
No 5
>4ask_A Lysine-specific demethylase 6B; oxidoreductase, KDM6B, GSK-J1, inhibitor, lysine specific HI demethylase; HET: K0I; 1.86A {Homo sapiens} PDB: 2xue_A* 4eyu_A* 4ez4_A* 4ezh_A*
Probab=1.00 E-value=1 Score=417.54 Aligned_cols=284 Identities=20% Similarity=0.182 Sum_probs=216.7
Q ss_pred CCCCCCCCC-----CCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEEEECCCEEEEEECCCCHHHHHHH
Q ss_conf 877898999-----999644559988886323598414666444301586521013443088410897167308999999
Q 001595 245 WNLNNLPRL-----PGSVLAFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHASTLEKA 319 (1048)
Q Consensus 245 WNLnnLp~l-----~gSLL~~~~~~I~GVttP~LYiGM~fStf~WH~ED~~LySINYlH~GapK~WY~VP~~~~~kfE~l 319 (1048)
.+|++||.. .|+||+|++..|+|||+||||+||+||+||||+||++|+||||||+|++|+||+||++++++||++
T Consensus 206 ~eL~kLP~flr~~~~gslLs~l~~~I~GVNtpqLYigm~gS~t~wH~Ed~~l~SINynhggg~c~WY~VP~e~~~k~e~l 285 (510)
T 4ask_A 206 QELLKLPAFMRVTSTGNMLSHVGHTILGMNTVQLYMKVPGSRTPGHQENNNFCSVNINIGPGDCEWFAVHEHYWETISAF 285 (510)
T ss_dssp HHGGGSCGGGSSSCTTBGGGGSSSCCTTTTSCEEEEECTTCEEEEECCGGGCEEEEEEEEESCEEEEEECGGGHHHHHHH
T ss_pred HHHHHCCHHHCCCCCCCHHHHCCCCCCCCCHHHEEECCCCCCCCCEECCCCCEEEEEEECCCCEEEEEECHHHHHHHHHH
T ss_conf 99850949767588776455188767886763468704666655220677432278752688606999889999999999
Q ss_pred HHHHCCHHHCCCCHHHHHCCCCCCHHHHHHCCCCEEEEECCCCCEEEECCCCEEEEECCCCCEEEEECCCCCCH--HHHH
Q ss_conf 99737311204901110011356913275169981674217991999848850132116643034322355314--5369
Q 001595 320 MRKHLPDLFEEQPDLLHELVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDW--LAHG 397 (1048)
Q Consensus 320 lk~~~p~lf~~~p~~L~h~~~~isP~~L~~~GIpv~r~vQ~pGEFVVTfP~aYHsgfn~GfN~aEAVNFA~~dW--L~~g 397 (1048)
+++..+ ++++ ..+|++|+.|+++||||||++|+||||||||||+||||||.|||+++|||||+++| ++.+
T Consensus 286 ~~k~~~-------d~l~-~~~~pspe~L~kagIPvyr~iQkPGdfVit~PgtyH~Vqs~Gf~~niaWNvap~t~~qlqlA 357 (510)
T 4ask_A 286 CDRHGV-------DYLT-GSWWPILDDLYASNIPVYRFVQRPGDLVWINAGTVHWVQATGWCNNIAWNVGPLTAYQYQLA 357 (510)
T ss_dssp HHHTTC-------CTTT-SCBCCCHHHHHHTTCCCEEEEECTTCEEEECTTCEEEEEESSSEEEEEEEECBSSHHHHHHH
T ss_pred HHHHCC-------CHHH-CCCCCCHHHHHHCCCCEEEEEECCCCEEEECCCCEEEEEECCEEEEEEEEECCCCHHHHHHH
T ss_conf 987481-------2565-15158999997589976999988998899899824789866700146787358988999999
Q ss_pred HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHH
Q ss_conf 99999998414989874789999999999999886632013688872001001341257999999999778310468313
Q 001595 398 QQAVELYSEQHRKTSLSHDKLLFGSVQAAIKALWELSVLQKKTPGNRKWKDACGKDGVLTKAIKTRVQMKKEGLQKLPSY 477 (1048)
Q Consensus 398 ~~a~e~y~~~~r~~~fS~d~LL~~~A~~~~~~l~e~~l~~k~~~~~~~~~~~c~~d~il~~~~k~r~~~e~~~~~~l~~~ 477 (1048)
.++.++|+..++.++|||++|+|+||+..... ++...+..+.|+ ...++. .+++...... .+
T Consensus 358 ~e~y~~n~~~~~~SivPm~~L~Wn~Ar~~k~~----------d~~l~~liK~~L-----~rSL~~-~~~~~d~~~~--~g 419 (510)
T 4ask_A 358 LERYEWNEVKNVKSIVPMIHVSWNVARTVKIS----------DPDLFKMIKFCL-----LQSMKH-CQVQRESLVR--AG 419 (510)
T ss_dssp HHHHHHHHHTTCCCSSCHHHHHHHHHHHCCCC----------CHHHHHHHHHHH-----HHHHHH-HHHHHHHHHH--HT
T ss_pred HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCC----------CHHHHHHHHHHH-----HHHHHH-HHHHHHHHHH--CC
T ss_conf 99999999849686357599999987521015----------989999999999-----999999-9999999986--79
Q ss_pred HHHHHCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCC---CCCCCCCCCHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHH
Q ss_conf 4441001235885663355443211101-1124435---78320013322215999996089997399999999999981
Q 001595 478 FKLQKMEIDFDLKTERECFSCFYDLHLS-AAGCKCS---PDRFACLKHANIFCSCEIDHRFVILRYSTDELNTLVEALEG 553 (1048)
Q Consensus 478 ~~~~k~~~~~d~~~er~C~~Ck~~lfLS-~V~C~C~---~~~~~CL~Ha~~lCsC~~~~~~llyRYt~~EL~~lv~~le~ 553 (1048)
.+. +..+....+..+.|..|...+|.- .|.-.-+ ...++|+.||.... -....++++.+|+++||..+++.|..
T Consensus 420 ~~i-~~~~~~~~~~~~~C~~C~~evFn~l~v~~~~~~~~~~~v~C~~Ca~~~~-~~~~~~~vl~~y~~~~L~~iyD~f~l 497 (510)
T 4ask_A 420 KKI-AYQGRVKDEPAYYCNECDVEVFNILFVTSENGSRNTYLVHCEGCARRRS-AGLQGVVVLEQYRTEELAQAYDAFTL 497 (510)
T ss_dssp CCE-EECCCCTTCCCEECTTTCCEECSEEEEEECC----CEEEECHHHHHHST-TTTTTCEEEESSCHHHHHHHHHHCCC
T ss_pred CEE-EECCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCEECHHHHHHCC-CCCCEEEEEEECCHHHHHHHHHCEEE
T ss_conf 788-6558688876666689984778889997037887753338867541137-87654899997219999998747284
Q ss_pred CHH
Q ss_conf 102
Q 001595 554 GLD 556 (1048)
Q Consensus 554 ~~~ 556 (1048)
...
T Consensus 498 ~~~ 500 (510)
T 4ask_A 498 APA 500 (510)
T ss_dssp CC-
T ss_pred CCC
T ss_conf 357
No 6
>2xxz_A Lysine-specific demethylase 6B; oxidoreductase, histone demethylation, oxygenase, chromatin modification; HET: 8XQ; 1.80A {Homo sapiens}
Probab=1.00 E-value=1 Score=356.57 Aligned_cols=160 Identities=25% Similarity=0.228 Sum_probs=144.9
Q ss_pred HHHCCCCCCCCCCCC-----CCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEEEECCCEEEEEECCCCH
Q ss_conf 220168877898999-----999644559988886323598414666444301586521013443088410897167308
Q 001595 239 QYAMSGWNLNNLPRL-----PGSVLAFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHA 313 (1048)
Q Consensus 239 ~y~~~~WNLnnLp~l-----~gSLL~~~~~~I~GVttP~LYiGM~fStf~WH~ED~~LySINYlH~GapK~WY~VP~~~~ 313 (1048)
.+...-++|+.||.. .++||+|++..|+|||+||||+||+||+||||+||++|+||||||+|++|+||+||++++
T Consensus 166 ~w~~q~~el~kLP~~lr~~~~gslL~~~~~~I~Gvn~pqLYig~~gS~t~~H~Ed~~l~SiNynhgp~~~~Wy~VP~e~~ 245 (332)
T 2xxz_A 166 RWKPQLQELLKLPAFMRVTSTGNMLSHVGHTILGMNTVQLYMKVPGSRTPGHQENNNFCSVNINIGPGDCEWFAVHEHYW 245 (332)
T ss_dssp HHHHHHHHHTTSCGGGCTTTTCCCSEETTEECCCTTSEEEEEECTTCEEEEECCGGGCEEEEEEEEESCEEEEEECGGGH
T ss_pred HHHHHHHHHHHCCHHHCCCCCCCHHHHCCCCCCCCCHHHEEEECCCCCCCCEECCCCCEEEEEECCCCCEEEEEECHHHH
T ss_conf 66999999865859665367532566268767886744557506765555155177343688622787617999779999
Q ss_pred HHHHHHHHHHCCHHHCCCCHHHHHCCCCCCHHHHHHCCCCEEEEECCCCCEEEECCCCEEEEECCCCCEEEEECCCCCCH
Q ss_conf 99999999737311204901110011356913275169981674217991999848850132116643034322355314
Q 001595 314 STLEKAMRKHLPDLFEEQPDLLHELVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDW 393 (1048)
Q Consensus 314 ~kfE~llk~~~p~lf~~~p~~L~h~~~~isP~~L~~~GIpv~r~vQ~pGEFVVTfP~aYHsgfn~GfN~aEAVNFA~~dW 393 (1048)
++||++|++..++ +++ ..+|++|+.|+++||||||++|+|||||||||||||||||+|||++||||||+++|
T Consensus 246 ~~~e~l~~k~~~d-------~~~-~~~~~~p~~L~~~gIPvyr~~QkpGd~Vi~~PgayH~v~n~G~~~n~awN~a~~~~ 317 (332)
T 2xxz_A 246 ETISAFCDRHGVD-------YLT-GSWWPILDDLYASNIPVYRFVQRPGDLVWINAGTVHWVQATGWCNNIAWNVGPLTA 317 (332)
T ss_dssp HHHHHHHHHTTCC-------TTT-SCBCCCHHHHHHTTCCCEEEEECTTCEEEECTTCEEEEEESSSEEEEEEEEESCTT
T ss_pred HHHHHHHHHCCCC-------HHH-CEECCCHHHHHHCCCCEEEEEECCCCEEEECCCCEEEEEECCEEEEEEEEECCCCH
T ss_conf 9999999864976-------321-50217899997689975999977998899899852778745412477797178867
Q ss_pred HHHHHHHHHHHHHC
Q ss_conf 53699999999841
Q 001595 394 LAHGQQAVELYSEQ 407 (1048)
Q Consensus 394 L~~g~~a~e~y~~~ 407 (1048)
+++ +.|+++|+.+
T Consensus 318 ~q~-~~a~erye~n 330 (332)
T 2xxz_A 318 YQY-QLALERYEWN 330 (332)
T ss_dssp GGG-GGC-------
T ss_pred HHH-HHHHHHHHHH
T ss_conf 899-9999998761
No 7
>2wzo_A Transforming growth factor beta regulator 1; nucleus, cell cycle, tumor suppressor; 1.60A {Homo sapiens}
Probab=1.00 E-value=1 Score=313.20 Aligned_cols=143 Identities=22% Similarity=0.423 Sum_probs=131.7
Q ss_pred CCCCCCCCCCCEEEEEEEEEECCC-CCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEEEEEECCCCCCEEEEEECCCCCC
Q ss_conf 533212346621498722243299-8666883227982899884245699940289999943899986399994799998
Q 001595 795 DQRFQKKLETCVEPINFGCVMCGK-LWCSKQAIFPKGFRSRVNFYSVLNPEKVCNYISEVLDAGLLGPLFKVTLEECPSE 873 (1048)
Q Consensus 795 ~~~~p~~~~~sl~ilsLG~Iv~dr-~fHs~~~IyPvGf~S~R~y~S~~dP~~~c~Y~ceIlD~G~~~PlFrVt~ed~P~~ 873 (1048)
.|.+|..++ +++++|||+|++|+ +|||++||||+||+++|+|||++||+++|+|+|+|+|+| .+|+|+|+++|+|++
T Consensus 2 ~p~lP~~~g-~l~v~slG~i~~~~~~fh~~~~IyPvGy~~~R~y~s~~dp~~~~~Y~c~I~d~~-~~P~F~V~~e~~~~~ 79 (146)
T 2wzo_A 2 RPVFPIGLG-GLTVYSLGEIITDRPGFHDESAIYPVGYCSTRIYASMKCPDQKCLYTCQIKDGG-VQPQFEIVPEDDPQN 79 (146)
T ss_dssp CCCCCEEET-TEEEEEEEECCCSSGGGBCSSCBCCEEEEEEEEEECSSCTTSEEEEEEEEEECS-SSEEEEEEETTCGGG
T ss_pred CCEECEEEC-CEEEEEEEEECCCCCCCCCCCCEECCCEEEEEEEECCCCCCCEEEEEEEEEECC-CCCEEEEEECCCCCC
T ss_conf 855268988-999998534816998832897051899999999704408997599999999789-742037876689975
Q ss_pred EEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 08828915799999999999999833765579999998777873324578997999999929998510000111213
Q 001595 874 TFVNVSAQKCWEMVLQRLNQEIERQGGLHERGLPHPQSLQSIDGLEMFGFLSSPIIQAIEALDPNHLCMEYWNHKLL 950 (1048)
Q Consensus 874 ~~~g~Spt~cW~~VlkrIn~~i~~r~~~G~~~Lp~l~~~~sisG~emFGls~P~I~~lIesLP~a~~C~~Y~~~~~~ 950 (1048)
.|+|.||++||++|+++|++.+. +. + +..+++|++||||++|.|+++||+|||+++|++|++.+|+
T Consensus 80 ~~~g~Sp~~~W~~il~~i~~~~~------~~-~----~~~~~sG~~~FGl~~p~V~~lie~Lpg~~~C~~Y~~~~f~ 145 (146)
T 2wzo_A 80 AIVSSSADACHAELLRTISTTMG------KL-M----PNLLPAGADFFGFSHPAIHNLIQSCPGARKCINYQWVKFD 145 (146)
T ss_dssp CEEESSHHHHHHHHHHHHHHHHT------CC-C----TTCCCCHHHHHTTTSHHHHHHHTTSTTGGGCTTCCCCCCC
T ss_pred EEEECCHHHHHHHHHHHHHHHHC------CC-C----CCCCCCHHHEECCCCHHHHHHHHHCCCCHHCCCCCCEEEE
T ss_conf 38948859999999999999864------74-8----8877785255667988999999829990032167857852
No 8
>2ypd_A Probable JMJC domain-containing histone demethyla PROT EIN 2C; oxidoreductase; 2.10A {Homo sapiens}
Probab=1.00 E-value=1 Score=70.39 Aligned_cols=104 Identities=13% Similarity=0.124 Sum_probs=83.4
Q ss_pred EEEEEECCCCHHHHHHHHHHHCCHHH---CCCCHHHHHCCCCCCHH----HHHHCCCCEEEEECCCCCEEEECCCCEEEE
Q ss_conf 10897167308999999997373112---04901110011356913----275169981674217991999848850132
Q 001595 303 KIWYGVPGSHASTLEKAMRKHLPDLF---EEQPDLLHELVTQLSPS----VLKAEGVPVYHVVQHSGEFVLTFPRAYHSG 375 (1048)
Q Consensus 303 K~WY~VP~~~~~kfE~llk~~~p~lf---~~~p~~L~h~~~~isP~----~L~~~GIpv~r~vQ~pGEFVVTfP~aYHsg 375 (1048)
-+|-...+.+++|+.++++++..+.. ....+-++...+.++.. ...+.||..+.++|++||+|++-+|++|.+
T Consensus 234 AlW~Ifr~~D~~klr~~L~~~~~e~~~~~~~~~dPihdq~~yL~~~~r~~L~ee~gv~~~~~~Q~~GeavfiPaG~~HQV 313 (392)
T 2ypd_A 234 ALWHIYAGKDVDKIREFLQKISKEQGLEVLPEHDPIRDQSWYVNKKLRQRLLEEYGVRTCTLIQFLGDAIVLPAGALHQV 313 (392)
T ss_dssp EEEEEECGGGHHHHHHHHHHHHHHHC------CCHHHHTCCCCCHHHHHHHHHHHCCCCEEEEEETTCEEEECTTCEEEE
T ss_pred CEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECHHHHHHHHHHCCCEEEEEEECCCCEEEECCCCHHHH
T ss_conf 45654577669999999999988649876677786768887866999999987519704899973787799669978887
Q ss_pred ECCCCCEEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf 1166430343223553145369999999984
Q 001595 376 FNCGFNCAEAVNVAPVDWLAHGQQAVELYSE 406 (1048)
Q Consensus 376 fn~GfN~aEAVNFA~~dWL~~g~~a~e~y~~ 406 (1048)
.|..-++..|+||..+.-+.....-.+-+|.
T Consensus 314 ~Nl~~~i~va~df~spe~~~~c~~lt~E~R~ 344 (392)
T 2ypd_A 314 QNFHSCIQVTEDFVSPEHLVESFHLTQELRL 344 (392)
T ss_dssp EESSEEEEEEEEECCGGGHHHHHHHHHHC--
T ss_pred HCCCCHHHHHHHHCCHHHHHHHHHHHHHHHH
T ss_conf 5202214576522684219999997899862
No 9
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=1.00 E-value=1 Score=66.83 Aligned_cols=148 Identities=11% Similarity=0.008 Sum_probs=107.1
Q ss_pred EEEEECCCCCCCCCCCCCCCEEEEEEEECCCEEEEEECCCCHHHHHHHHHHHCCHHHCCCCHHHHHCCCCCCHHHHHHCC
Q ss_conf 59841466644430158652101344308841089716730899999999737311204901110011356913275169
Q 001595 272 WLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHASTLEKAMRKHLPDLFEEQPDLLHELVTQLSPSVLKAEG 351 (1048)
Q Consensus 272 ~LYiGM~fStf~WH~ED~~LySINYlH~GapK~WY~VP~~~~~kfE~llk~~~p~lf~~~p~~L~h~~~~isP~~L~~~G 351 (1048)
|+++|+.+|.+.+|.+-....+.+.+..| -|.||.+||.... +. +.+..... .+ +...++ + ...
T Consensus 234 ~~~mG~~gS~T~~HiD~~~ts~w~~vi~G-rK~w~L~PPt~~n-l~-~~~~~~~s----~~----~~~~~~-~----~~~ 297 (447)
T 3kv4_A 234 YCLMSVRDSYTDFHIDFGGTSVWYHVLKG-EKIFYLIRPTNAN-LT-LFECWSSS----SN----QNEMFF-G----DQV 297 (447)
T ss_dssp EEEEECTTEEEEEECCGGGCEEEEEEEES-EEEEEEECCCHHH-HH-HHHHHHTC----SS----GGGSCG-G----GGS
T ss_pred EEEEECCCCCCCEEECCCCCCEEEEEEEE-EEEEEEECCCCCC-CC-CHHHCCCC----CC----HHHHHC-C----CCC
T ss_conf 99981899889866899998345898601-7999996987245-44-20111357----53----023340-5----545
Q ss_pred CCEEEEECCCCCEEEECCCCEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCC--CC-CHHHHHHHHHHHHHH
Q ss_conf 981674217991999848850132116643034322355314536999999998414989--87-478999999999999
Q 001595 352 VPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLAHGQQAVELYSEQHRKT--SL-SHDKLLFGSVQAAIK 428 (1048)
Q Consensus 352 Ipv~r~vQ~pGEFVVTfP~aYHsgfn~GfN~aEAVNFA~~dWL~~g~~a~e~y~~~~r~~--~f-S~d~LL~~~A~~~~~ 428 (1048)
...++++|+|||.+++-.|-+|+++|...+++..-||.+..-++.-....+.=+..+.+. -| .++.++|-+|.....
T Consensus 298 ~~~~~v~l~pGetlfIPsGWwH~V~nledsIai~~NF~~~~nl~~~l~~~~~E~~~~~~~~~~~p~f~~~~w~~~~~~~~ 377 (447)
T 3kv4_A 298 DKCYKCSVKQGQTLFIPTGWIHAVLTPVDCLAFGGNFLHSLNIEMQLKAYEIEKRLSTADLFRFPNFETICWYVGKHILD 377 (447)
T ss_dssp SCCEEEEEETTCEEEECTTCEEEEEESSCEEEEEEEECCSTTHHHHHHHHHHHHHTTCCGGGSCTTHHHHHHHHHHHHHH
T ss_pred CCEEEEEECCCCEEECCCCCEEEEECCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 64399998898678638997688863788799815434634799999999999860797423266879999999999999
Q ss_pred HHHHHHH
Q ss_conf 9886632
Q 001595 429 ALWELSV 435 (1048)
Q Consensus 429 ~l~e~~l 435 (1048)
.+.++.-
T Consensus 378 ~~~~~~~ 384 (447)
T 3kv4_A 378 IFRGLRE 384 (447)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
T ss_conf 9887875
No 10
>3k3o_A PHF8, PHD finger protein 8; histone demethylase, chromatin modification, methylated H3K9, mental retardation, metal-BI phosphoprotein, zinc-finger; HET: AKG; 2.10A {Homo sapiens} PDB: 3k3n_A* 4do0_A* 2wwu_A*
Probab=1.00 E-value=1 Score=65.60 Aligned_cols=148 Identities=11% Similarity=0.019 Sum_probs=106.2
Q ss_pred CEEEEECCCCCCCCCCCCCCCEEEEEEEECCCEEEEEECCCCHHHHHHHHHHHCCHHHCCCCHHHHHCCCCCCHHHHHHC
Q ss_conf 35984146664443015865210134430884108971673089999999973731120490111001135691327516
Q 001595 271 PWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHASTLEKAMRKHLPDLFEEQPDLLHELVTQLSPSVLKAE 350 (1048)
Q Consensus 271 P~LYiGM~fStf~WH~ED~~LySINYlH~GapK~WY~VP~~~~~kfE~llk~~~p~lf~~~p~~L~h~~~~isP~~L~~~ 350 (1048)
-|+++|+.+|.+.+|.+-....+-+.+..| -|.||.+||.... +. +.+..... ..+ ...++ +. .
T Consensus 149 r~l~mGp~gS~T~~HiD~~gts~w~~vv~G-rK~w~L~PPt~~n-l~-~y~~~~~s--~~~------~e~~~-~~----~ 212 (371)
T 3k3o_A 149 KYCLMSVRDSYTDFHIDFGGTSVWYHVLKG-EKIFYLIRPTNAN-LT-LFECWSSS--SNQ------NEMFF-GD----Q 212 (371)
T ss_dssp CEEEEECTTEEEEEECCGGGCEEEEEEEEE-EEEEEEECCCHHH-HH-HHHHHHTS--TTG------GGSCG-GG----T
T ss_pred EEEEECCCCCCCCEEECCCCCCEEEEEEEE-EEEEEEECCCCCC-CC-CCCCCCCC--CCC------CHHHC-CC----C
T ss_conf 699980899889867889998434788645-7999997977024-45-45445567--760------03440-66----5
Q ss_pred CCCEEEEECCCCCEEEECCCCEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCC--CC-CHHHHHHHHHHHHH
Q ss_conf 9981674217991999848850132116643034322355314536999999998414989--87-47899999999999
Q 001595 351 GVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLAHGQQAVELYSEQHRKT--SL-SHDKLLFGSVQAAI 427 (1048)
Q Consensus 351 GIpv~r~vQ~pGEFVVTfP~aYHsgfn~GfN~aEAVNFA~~dWL~~g~~a~e~y~~~~r~~--~f-S~d~LL~~~A~~~~ 427 (1048)
....++++|+|||.+++-.|-+|+++|...+++..-||....=++.-..+.+.=+..+.+. -| .++.+.|-+|....
T Consensus 213 ~~~~~ev~l~pGEtLfIPsGWwH~V~nledSIai~~NFl~~~nl~~~l~~~~~E~~~~~~~~f~fp~F~~~~w~~~~~~~ 292 (371)
T 3k3o_A 213 VDKCYKCSVKQGQTLFIPTGWIHAVLTPVDCLAFGGNFLHSLNIEMQLKAYEIEKRLSTADLFRFPNFETICWYVGKHIL 292 (371)
T ss_dssp SSCCEEEEEETTCEEEECTTCEEEEEEEEEEEEEEEEECCSTTHHHHHHHHHHHHHHC----CCCTTHHHHHHHHHHHHH
T ss_pred CCCEEEEEECCCCEEEECCCCEEEEECCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 67449999888857870799759875688869988754663428999999879975399854426667988999999999
Q ss_pred HHHHHHH
Q ss_conf 9988663
Q 001595 428 KALWELS 434 (1048)
Q Consensus 428 ~~l~e~~ 434 (1048)
..+.++.
T Consensus 293 ~~~~~~~ 299 (371)
T 3k3o_A 293 DIFRGLR 299 (371)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
T ss_conf 9999888
Done!