BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 001596
(1048 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q03701|CEBPZ_HUMAN CCAAT/enhancer-binding protein zeta OS=Homo sapiens GN=CEBPZ PE=1
SV=3
Length = 1054
Score = 414 bits (1065), Expect = e-114, Method: Compositional matrix adjust.
Identities = 293/861 (34%), Positives = 448/861 (52%), Gaps = 142/861 (16%)
Query: 219 LAATQRSGTAADKVSAFSVIVGDNPMANLRSLDALLGMVSSKVGKRHALTGFEALKELFV 278
+ A SGT D+++A +++ D+ + L+ ++ L+ +V K K+ L + KEL +
Sbjct: 235 MKAIVSSGTLGDRMAAMILLIQDDAVHTLQFVETLVNLVKKKGSKQQCLMALDTFKELLI 294
Query: 279 SSLLPD-RKLKTLVQRPLDNLPETKDGYS-----LLLFWYYEEFLKQRYERFVLALEESS 332
+ LLPD RKL+ QRP D L + G L+ WY+E LK FV LE S
Sbjct: 295 TDLLPDNRKLRIFSQRPFDKLEQLSSGNKDSRDRRLILWYFEHQLKHLVAEFVQVLETLS 354
Query: 333 RDVLPVLKTKALKIVYALLTSKPEQEHRLLSALVNKLGDPQNKGASNADFHLSNLLADHP 392
D L KT+AL + + LL +KPE+E LL +VNKLGDPQN+ A+ A L LL HP
Sbjct: 355 HDTLVTTKTRALTVAHELLCNKPEEEKALLVQVVNKLGDPQNRIATKASHLLETLLCKHP 414
Query: 393 NMKAVVINEVDSFLFRPHLGLRAKYHAVNFLSQIRLSHKGDGPKVAKRLIDVYFALFKVL 452
NMK VV EV+ LFR ++ +A+Y+A+ FL+Q+ LSH + ++A +LI VYF F+
Sbjct: 415 NMKGVVSGEVERLLFRSNISSKAQYYAICFLNQMALSH--EESELANKLITVYFCFFRTC 472
Query: 453 ITEAGAGDKMDKNSKTGNKHISTFSKKSQLKISPEPHIELDSRILSALLMGVNRAFPYVS 512
+ + +++S++LSALL GVNRA+PY
Sbjct: 473 VKKK----------------------------------DVESKMLSALLTGVNRAYPY-- 496
Query: 513 SNEADDIIEVQTPMLFKLVHSKNFNVAVQALMLLDKISSKNHIVSDRFYRALYSKLLLPA 572
S DD + Q LFK++H NFN +VQALMLL ++ + +SDR+Y ALY K+L P
Sbjct: 497 SQTGDDKVREQIDTLFKVLHIVNFNTSVQALMLLFQVMNSQQTISDRYYTALYRKMLDPG 556
Query: 573 AMNSSKAEMFIGLLHRAMKNDVNLKRVAAFSKRLLQVVLQQPPQYACGCLFLLSEVLKAR 632
M SK MF+ L+++++K D+ L+RV AF KRLLQV QQ P + CG L+L+SE+LKA+
Sbjct: 557 LMTCSKQAMFLNLVYKSLKADIVLRRVKAFVKRLLQVTCQQMPPFICGALYLVSEILKAK 616
Query: 633 PPLWNMVLQNESVDEDLEHFEDVVEETDNEP-SDASKTEENDVKLVKRTDDAKSDSESSE 691
P L + L + +D E+F D ++ D E +DA K E +VK+ +
Sbjct: 617 PGLRSQ-LDDHPESDDEENFIDANDDEDMEKFTDADKETE----IVKKLE---------T 662
Query: 692 DEDIPTSDSEEDVSDQPEELFIRDNSKDLQKSKAPSHHVPQPPTSSKSSLPGG-----YN 746
+E +P +D E + +PE A H +L GG Y+
Sbjct: 663 EETVPETDVE---TKKPE--------------VASWVHF--------DNLKGGKQLNKYD 697
Query: 747 PRHREPSYCNADHVSWWELMVLASHVHPSVSTMAGTLLSGANIVYNGNPLSDLTLTAFLD 806
P R P +C A++ S WEL L+ H HPSV+ A T+L G I Y+G+PL D TL FLD
Sbjct: 698 PFSRNPLFCGAENTSLWELKKLSVHFHPSVALFAKTILQGNYIQYSGDPLQDFTLMRFLD 757
Query: 807 KFMEKKPKPTTWHGGSQ------IEPAKK---LDMNHQLI-GQEILSLAEVDVPPEDLVF 856
+F+ + PKP H G + ++P +K D+ H + +E L+ E +P +++ F
Sbjct: 758 RFVYRNPKP---HKGKENTDSVVMQPKRKHFIKDIRHLPVNSKEFLAKEESQIPVDEVFF 814
Query: 857 HKFYMNKVNTTKKPKKKKKKKGAEDEA--------AEELFDVDGDDYEVEGGDESDNEEI 908
H++Y K K+K+K+ A++E+ EEL D DD G
Sbjct: 815 HRYY------KKVAVKEKQKRDADEESIEDVDDEEFEELIDTFEDDNCFSSGK------- 861
Query: 909 DNMLDSTDLSLVGDGDYDYDDLDKVADEDDDDLVG-DASDLEMGAPDDS--AEREDFDTN 965
D+M + ++ G D + LD+ ++ DD+L D ++ +G+ DD AE ++
Sbjct: 862 DDMDFAGNVKKRTKGAKD-NTLDEDSEGSDDELGNLDDDEVSLGSMDDEEFAEVDEDGGT 920
Query: 966 YFSHSDDDDDNV-QLNIGAE-----------DDGSDEGSKLGRRKRKRKSHKKAGATPFA 1013
+ DD+ ++V +L + ++ DD GS G RK+KR + ++ F
Sbjct: 921 FMDVLDDESESVPELEVHSKVSTKKSKRKGTDDFDFAGSFQGPRKKKRNLN---DSSLFV 977
Query: 1014 SLEDYQHLLDDNDPSEMKSAG 1034
S E++ HLLD+N S+ + G
Sbjct: 978 SAEEFGHLLDENMGSKFDNIG 998
>sp|P53569|CEBPZ_MOUSE CCAAT/enhancer-binding protein zeta OS=Mus musculus GN=Cebpz PE=2
SV=2
Length = 1052
Score = 406 bits (1044), Expect = e-112, Method: Compositional matrix adjust.
Identities = 289/894 (32%), Positives = 449/894 (50%), Gaps = 145/894 (16%)
Query: 188 VERKRELGERLLWQYVSDYEGSRG--QTGDIKMLAATQRSGTAADKVSAFSVIVGDNPMA 245
V + + L ++L VS ++ + G + A SGT AD+++A +++ D+ +
Sbjct: 202 VSKYKALAQKLYEHEVSLFKSKTNNQKGGSSTWMKAIVSSGTLADRMAAMILLIQDDAVH 261
Query: 246 NLRSLDALLGMVSSKVGKRHALTGFEALKELFVSSLLPD-RKLKTLVQRPLDNLPETKDG 304
L+ ++ L+ +V K K+ L + KEL ++ LLPD RKL+ Q P L E G
Sbjct: 262 TLQFVETLMSLVKKKGSKQQCLMALDTFKELLITDLLPDSRKLRVFSQHPFHKLEEMSSG 321
Query: 305 YS-----LLLFWYYEEFLKQRYERFVLALEESSRDVLPVLKTKALKIVYALLTSKPEQEH 359
L+ WYYE LK FV LE S D L KT+AL + LL KPE+E
Sbjct: 322 NKDSRDRRLILWYYEHQLKHLVAEFVQVLETLSHDSLVTTKTRALVAAHELLCDKPEEEK 381
Query: 360 RLLSALVNKLGDPQNKGASNADFHLSNLLADHPNMKAVVINEVDSFLFRPHLGLRAKYHA 419
LL ++NKLGDPQN+ A+ A L LL HPNMK VV E++ LFR ++ +A+Y+A
Sbjct: 382 ALLVQVINKLGDPQNRIATKASHLLEVLLRKHPNMKGVVCGEIERLLFRSNISPKAQYYA 441
Query: 420 VNFLSQIRLSHKGDGPKVAKRLIDVYFALFKVLITEAGAGDKMDKNSKTGNKHISTFSKK 479
+ FL+Q+ LSH + ++A +LI +YF F+ I +
Sbjct: 442 ICFLNQMVLSH--EESELANKLITLYFCFFRTCIKKK----------------------- 476
Query: 480 SQLKISPEPHIELDSRILSALLMGVNRAFPYVSSNEADDIIEVQTPMLFKLVHSKNFNVA 539
+++S++LSA+L GVNRA+PY S DD + Q LFK++H NFN +
Sbjct: 477 -----------DIESKMLSAILTGVNRAYPY--SQIGDDKVREQVDTLFKVLHVVNFNTS 523
Query: 540 VQALMLLDKISSKNHIVSDRFYRALYSKLLLPAAMNSSKAEMFIGLLHRAMKNDVNLKRV 599
VQALMLL ++ + +SDR+Y ALY K+L P SK MF+ L+++++K D+ L+RV
Sbjct: 524 VQALMLLFQVMNSQQTISDRYYTALYRKMLDPGLTTCSKQAMFLNLIYKSLKADIMLRRV 583
Query: 600 AAFSKRLLQVVLQQPPQYACGCLFLLSEVLKARPPLWNMVLQNESVDEDLEHFEDVVEET 659
AF KRLLQV Q P + CG L+L+SE+LKA+P L + + + DE E+F DV +++
Sbjct: 584 KAFVKRLLQVTCTQMPPFICGALYLVSEILKAKPDLRSQLDDHPESDE--ENFVDVGDDS 641
Query: 660 DNEP-SDASKTEENDVKLVKRTDDAKSDSESSEDEDIPTSDSEEDVSDQPEELFIRDNSK 718
D+E +DA K D VK + +++ ESS + + P + S DN K
Sbjct: 642 DDEKFTDADKGTATDA--VKEVESKETEPESSAEAEKPKAASWVHF----------DNLK 689
Query: 719 DLQKSKAPSHHVPQPPTSSKSSLPGGYNPRHREPSYCNADHVSWWELMVLASHVHPSVST 778
++ K Y+P R P +C A++ + WEL L+ H HPSV+
Sbjct: 690 GGKQIKT-------------------YDPFSRNPLFCGAENTTLWELKKLSEHFHPSVAL 730
Query: 779 MAGTLLSGANIVYNGNPLSDLTLTAFLDKFMEKKPKPTTWHGGSQ------IEPAKKLDM 832
A T+L G I Y+G+PL D TL FLD+F+ + PK H G + ++P +K M
Sbjct: 731 FAKTILEGNCIQYSGDPLQDFTLMRFLDRFVYRNPK---LHKGKENTDSVVMQPKRKHFM 787
Query: 833 NH----QLIGQEILSLAEVDVPPEDLVFHKFYMNKVNTTKKPKKKKKKKGAEDEAAEELF 888
+ + +E L+ E +P +++ F+++Y KV K K+K+ A++E+ E++
Sbjct: 788 KNVRDLAVNSKEFLAKEESQIPVDEVFFYRYY-KKVAVV----KDKQKRSADEESIEDI- 841
Query: 889 DVDGDDYEVEGGDESDNEEIDNMLDS-TDLSLVGDGDYDYD-------------DLDKVA 934
D+EE +NM+D+ D + G D D DL+
Sbjct: 842 ---------------DDEEFENMIDTFEDDNCFPPGKDDIDFASNMKKTKGAKADLEDSE 886
Query: 935 DEDDDDLVGDASDLEMGAPDDSAEREDFDTNYFSHSDDD---------DDNVQLNI---- 981
D + D ++ +G+ +D D D F DD D N + N
Sbjct: 887 SSDGELGDLDDDEVSLGSMNDEDFEIDEDGGTFMDVSDDESEDAPEFADANPKANTKKSK 946
Query: 982 -GAEDDGSDEGSKLGRRKRKRKSHKKAGATPFASLEDYQHLLDDNDPSEMKSAG 1034
+EDD GS G++K+K+ + ++ F S E++ HLLD+N S+ + G
Sbjct: 947 RKSEDDFDFAGSFQGQKKKKKSFN---DSSLFVSAEEFGHLLDENMGSKFDTIG 997
>sp|O36021|YEK9_SCHPO Uncharacterized protein C4F10.09c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC4F10.09c PE=1 SV=1
Length = 860
Score = 291 bits (746), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 227/719 (31%), Positives = 360/719 (50%), Gaps = 81/719 (11%)
Query: 180 KRVVDLKYVERKRELGERLLWQYVSDYEGSRGQ-TGDIKMLAATQRSGTAADKVSAFSVI 238
K+ V++ +V G LL + + + G T D +ML SGT +D++SA +++
Sbjct: 51 KKFVNVDHVSELETRGLLLLKEDSERFSETLGHGTADKRMLQTLISSGTTSDRISALTLL 110
Query: 239 VGDNPMANLRSLDALLGMVSSKVGKRHALTGFEALKELFVSSLLPDRKLKTLVQRPLDNL 298
V ++P+ +++L+ LL + S K + A LK+LF+ LLPDRKLK + Q+
Sbjct: 111 VQESPIHAVKALETLLSICSKK-SRNEATQAITTLKDLFIGGLLPDRKLKYMKQQSCLGS 169
Query: 299 PETKDGYSLLLFWYYEEFLKQRYERFVLALEESSRDVLPVLKTKALKIVYALLTSKPEQE 358
D + L+ W +E FLK Y +++ +E S D L +K++ + +Y LL +KPEQE
Sbjct: 170 KNVTDKH--LMVWAFESFLKSFYFKYIQIIEALSFDALLFVKSQMVSTIYDLLKAKPEQE 227
Query: 359 HRLLSALVNKLGDPQNKGASNADFHLSNLLADHPNMKAVVINEVDSFLFRPHLGLRAKYH 418
LL L+NKLGD +NK AS A + + L A HP MK V+ E++ F+F P + Y+
Sbjct: 228 QNLLKLLINKLGDKENKIASKASYSILQLEASHPAMKLVITKEIERFIFAPSTSRTSCYY 287
Query: 419 AVNFLSQIRLSHKGDGPKVAKRLIDVYFALFKVL--------ITEAGAGDKMDKNSKTGN 470
+ L+Q L+HK VA LI++YF F L + +A +K S + N
Sbjct: 288 TLITLNQTVLTHK--QVDVANLLIEIYFVFFTKLLFALEKEEVADAPTLEKKSLQSDSKN 345
Query: 471 KHISTFSKKSQLKISPEPHIELDSRILSALLMGVNRAFPYVSSNEADDIIEVQTPMLFKL 530
K K L+ E ++ +SR++SA+L GVNRA+P+ N + + LF +
Sbjct: 346 KKSQKRKKDEDLRKEAEENV--NSRVISAVLTGVNRAYPFAEVN--SEKFDKHMNTLFAI 401
Query: 531 VHSKNFNVAVQALMLLDKISSKNHIVSDRFYRALYSKLLLPAAMNSSKAEMFIGLLHRAM 590
H+ +FN +VQ LML+ + S+ +SDR+Y++LY LL P SSK +++ LL++++
Sbjct: 402 THTASFNTSVQVLMLIFQASASRDFISDRYYKSLYESLLDPRLTTSSKQSLYLNLLYKSL 461
Query: 591 KNDVNLKRVAAFSKRLLQVVLQQPPQYACGCLFLLSEVLKARPPLWNMVLQNESVDED-- 648
D N+ RV AF KR++QV Q P G ++ +++ A L +M E D D
Sbjct: 462 IIDNNIPRVRAFIKRMVQVSAWQQPPLVTGLFHVMHQLVIATTALRSMFTNAEIHDFDGD 521
Query: 649 -LEHFEDVVEETDNEPSDASKTEENDVKLVKRTDDAKSDSESSEDEDIPTSDSEEDVSDQ 707
E F+DV EE+DV ++D K DS D+D SD Q
Sbjct: 522 EEEVFKDV--------------EEDDV-----SEDQKVDS----DKDGKLSDK------Q 552
Query: 708 PEELFIRDNSKDLQKSKAPSHHVPQPPTSSKSSLPGGYNPRHREPSYCNADHVSWWELMV 767
++ N K + S Y+ R R+P Y NAD WE+
Sbjct: 553 SHSAYVVGNVSVSTKKEHLS-----------------YDGRKRDPQYSNADGSCLWEIHP 595
Query: 768 LASHVHPSVSTMAGTLLSGANIVYNGNP-LSDLTLTAFLDKFMEKKPKPT-TWHGGSQIE 825
+H HP+VS +A +L+ G I+ G P LS TL FLDKF + PK + G S ++
Sbjct: 596 FLNHFHPTVSLLAKSLVYGEKIL--GKPNLSLHTLNHFLDKFAYRNPKKSAAARGHSIMQ 653
Query: 826 P-AKKLDMNHQ---------LIGQEILSLAEVDVPPEDLVFHKFYMNKVNTTKKPKKKK 874
P A L + + ++ S + ++P ++L F++F+ +K K+ +K K
Sbjct: 654 PLAGGLSKGYVPGSTYSGVPMNSEQFTSKKQEEIPVDELFFYRFFNDKYIKGKQARKTK 712
>sp|Q19753|YU0O_CAEEL Uncharacterized protein F23B12.7 OS=Caenorhabditis elegans
GN=F23B12.7 PE=3 SV=1
Length = 953
Score = 243 bits (621), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 202/700 (28%), Positives = 332/700 (47%), Gaps = 80/700 (11%)
Query: 226 GTAADKVSAFSVIVGDNPMANLRSLDALLGMVSSKVGKRHALTGFEALKELFVSSLLPD- 284
GTA DK +A + + +P+ +L ++ L+ K G R + L+++F++ LP+
Sbjct: 163 GTATDKRTAMQLQMHKSPVHSLEYIEKLIASCK-KQGTRDVVDIIPILEDVFINHCLPEN 221
Query: 285 RKLKTLVQRPLDNLPETKDG-----YSLLLFWYYEEFLKQRYERFVLALEESSRDVLPVL 339
RKL +R L L E G +LL W +E LK Y++F+ L E + L +
Sbjct: 222 RKLIPFSKRALRELTELSSGNQRLRRKILLMWAFEHELKILYQQFIETLVEIIKRPLEEV 281
Query: 340 KTKALKIVYALLTSKPEQEHRLLSALVNKLGDPQNKGASNADFHLSNLLADHPNMKAVVI 399
++LK + L +PE E+ +LSALVN G P K + L + HP M+ V++
Sbjct: 282 IKRSLKTLANCLMGRPESENLILSALVNAFGHPNYKIGAFTVVLLEGISRKHPAMRIVMV 341
Query: 400 NEVDSFLFRPHLGLRAKYHAVNFLSQIRLSHKGDGPKVAKRLIDVYFALFKVLITEAGAG 459
E++ FR ++ RA +A+ FLSQ++ S K + RL+ +Y +LFK ++ G
Sbjct: 342 EEIERLAFRKNVNERAHLYAMTFLSQMKFSKKDSD--LCCRLMSIYLSLFKTIV-----G 394
Query: 460 DKMDKNSKTGNKHISTFSKKSQLKISPEPHIELDSRILSALLMGVNRAFPYVSSNEADDI 519
K+ D+R+L +L G NRAFP+ + +AD +
Sbjct: 395 KKIT-----------------------------DNRLLPIILAGANRAFPF--AKDADKL 423
Query: 520 IEVQTPMLFKLVHSKNFNVAVQALMLLDKISSKNHIVSDRFYRALYSKLL--LPAAMNSS 577
+E + F L H+ N+ A+ AL LL + N VSDRFY ALY KLL PA +
Sbjct: 424 LEDVKDVYF-LAHNSNYRTAIPALKLLFQFHKMNDYVSDRFYNALYRKLLDNCPAGAYAQ 482
Query: 578 KAEMFIGLLHRAMKNDVNLKRVAAFSKRLLQVVLQQPPQYACGCLFLLSEVLKARPPLWN 637
+ L+ MK D + +RV F KRLLQV + P + L L+S + K R
Sbjct: 483 ----LLKLMFDTMKEDSSAQRVRTFVKRLLQVAVNSQPDFTASILILISRLQKLRGTTEK 538
Query: 638 MVLQNESVDEDLEHFEDVVEETDNEPSDASKTEENDVKLVKRTDDAKSDSESSEDEDIPT 697
+V+ + +D++ VV + N+ D + + DV+ + + + E E++ +
Sbjct: 539 LVV----LSKDIDPAARVVAQMQNDEDDEERYVDLDVEGNEISRNGVKKEEKEEEDIVIE 594
Query: 698 SDSEEDVSD-QPEELFIRDNSKDLQKSKAPSHHVPQPPTSSKSSLPGGYNPRHREPSYCN 756
+ +ED QP +L + + V + + + P Y+ R P + +
Sbjct: 595 ENEDEDKKKVQPGKL----------GASSSGGWVHRSIGARGAKTP--YDSVARNPLFVD 642
Query: 757 ADHVSWWELMVLASHVHPSVSTMAGTLLSGANIVYNGNPLSDLTLTAFLDKFMEKKPKPT 816
A H + EL++L+ H HPSV+ A L+ G I Y G L+D TL AFLD+F + PK
Sbjct: 643 ASHTADSELLLLSKHYHPSVAVFAKALMEGREINYGGEALNDFTLMAFLDRFAFRNPKDV 702
Query: 817 TWHGGSQIEPAKKLD---MNHQLIG-QEILSLAEVDVPPEDLVFHKFYMNKVNTTKKPKK 872
T G++I K D + +G E ++P ++ H++ ++ +K KK
Sbjct: 703 TKTTGTRIVRKKAHDPWGVRKLAVGSNEYTQKRREEIPADERFLHRY----TSSLQKEKK 758
Query: 873 KKKKKGAED-EAAEELFDVDGDDY--EVEGGDESDNEEID 909
KK+ G +D E AE + + D E G+ ++ +ID
Sbjct: 759 VKKENGDDDWEYAESVSSAEFDQLLERFEPGELNEEFDID 798
>sp|Q12176|MAK21_YEAST Ribosome biogenesis protein MAK21 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=MAK21 PE=1 SV=1
Length = 1025
Score = 243 bits (621), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 162/464 (34%), Positives = 252/464 (54%), Gaps = 34/464 (7%)
Query: 206 YEGSRGQTGDIKMLAATQRSGTAADKVSAFSVIVGDNPMANLRSLDALLGMVSSKVGKRH 265
YE + K ++ GT DK+SA ++++ D+P+ N +SL+ L+ K +
Sbjct: 261 YEEFTKDSSQAKFMSQILSDGTLNDKISAVTLLIQDSPLHNTKSLETLVSYCGKK-SRNS 319
Query: 266 ALTGFEALKELFVSSLLPDRKLKTLVQRPLDNLPETKDGYSLLL------FWYYEEFLKQ 319
AL ALK+LF++ LLP+RKL+ +P G S++L +Y+E++LK+
Sbjct: 320 ALQSLNALKDLFLNGLLPNRKLRYFKNQP---------GLSMMLNKKTLAIFYFEDYLKK 370
Query: 320 RYERFVLALEESSRDVLPVLKTKALKIVYALLTSKPEQEHRLLSALVNKLGDPQNKGASN 379
+ R + LE S D + ++ + L V+ LLT++PEQE LL VNK+GD +K +S
Sbjct: 371 LFFRVLEVLEVLSHDPIIHVRLQILNHVFDLLTNQPEQEFNLLRLGVNKIGDIDSKVSSK 430
Query: 380 ADFHLSNLLADHPNMKAVVINEVDSFLFRPHLGLRAKYHAVNFLSQIRLSHKGDGPKVAK 439
A + L L HPNMK++VI+ + RP+ Y++V L+Q L D VA
Sbjct: 431 ASYLLLKLEQAHPNMKSIVIDAIVDIALRPNADYHTTYYSVITLNQTILKRSEDS--VAN 488
Query: 440 RLIDVYFALF-KVLIT--EAGAGDKMDKNSKTGNKHISTFSKKS-----QLKISPEPHIE 491
+L+ YF LF K LI + + NSK+ + KK +KI +
Sbjct: 489 KLVKTYFTLFEKFLINTDKDNTNGVVKSNSKSYEEKRKKNFKKGKHGGKSVKIEKTENEV 548
Query: 492 LD---SRILSALLMGVNRAFPYVSSNEADDIIEVQTPMLFKLVHSKNFNVAVQALMLLDK 548
LD S++ SALL G+NRAFP+ + + EV LFK+ HS NFN ++QAL+L+++
Sbjct: 549 LDEKNSKLFSALLTGINRAFPFAQIPAS--VYEVHMETLFKITHSSNFNTSIQALVLINQ 606
Query: 549 ISSKNHIVSDRFYRALYSKLLLPAAMNSSKAEMFIGLLHRAMKND-VNLKRVAAFSKRLL 607
++ K + SDR+YR LY L P +NSSK +++ LL++++K D +N++RV AF KR+L
Sbjct: 607 VTVKAKLNSDRYYRTLYESLFDPRLVNSSKQGIYLNLLYKSLKQDALNVERVEAFVKRIL 666
Query: 608 QVVLQQ-PPQYACGCLFLLSEVLKARPPLWNMVLQNESVDEDLE 650
QV G FLL ++ K P + N+ L N VD + E
Sbjct: 667 QVCSHWLNVGTITGFFFLLIQLAKTVPQIKNL-LTNTPVDYEYE 709
Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 68/147 (46%), Gaps = 16/147 (10%)
Query: 745 YNPRHREPSYCNADHVSWWELMVLASHVHPSVSTMAGTLLSGANIVYNGNPLSDLTLTAF 804
Y+ R R+P + NA+ S WE+ +H HP+V T A ++G L TL+ F
Sbjct: 726 YDGRKRDPKFANAEKSSLWEINNFINHFHPTVKTYANAYVTGETEQIAKPDLGLFTLSHF 785
Query: 805 LDKFMEKKPKPT-TWHGGSQIEP------------AKKLDMNHQ---LIGQEILSLAEVD 848
LD+F+ + K T T G S ++P K D+ H + ++ L+ D
Sbjct: 786 LDRFVYRSAKQTNTARGTSIMQPLFSGSRVNDSVLVKASDIMHDQGPVNTEDWLTKKVED 845
Query: 849 VPPEDLVFHKFYMNKVNTTKKPKKKKK 875
+ PED F++++ K K KK K
Sbjct: 846 IKPEDKFFYQYFTTKKTADGKGKKSNK 872
>sp|Q8VI84|NOC3L_MOUSE Nucleolar complex protein 3 homolog OS=Mus musculus GN=Noc3l PE=2
SV=2
Length = 807
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 25/45 (55%)
Query: 743 GGYNPRHREPSYCNADHVSWWELMVLASHVHPSVSTMAGTLLSGA 787
G + P EP YCNA + + WEL L H HP V A LL+GA
Sbjct: 670 GVFLPELEEPEYCNAQNTALWELHTLRRHYHPIVRRFAAHLLAGA 714
>sp|Q91Y26|NOC3L_CRIGR Nucleolar complex protein 3 homolog OS=Cricetulus griseus GN=NOC3L
PE=2 SV=1
Length = 800
Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 25/45 (55%)
Query: 743 GGYNPRHREPSYCNADHVSWWELMVLASHVHPSVSTMAGTLLSGA 787
G + P EP YCNA + + WEL L H HP V A LL+GA
Sbjct: 671 GVFLPELEEPEYCNAQNTALWELHALRRHYHPVVQRFAVHLLAGA 715
>sp|Q8WTT2|NOC3L_HUMAN Nucleolar complex protein 3 homolog OS=Homo sapiens GN=NOC3L PE=1
SV=1
Length = 800
Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 28/51 (54%)
Query: 737 SKSSLPGGYNPRHREPSYCNADHVSWWELMVLASHVHPSVSTMAGTLLSGA 787
S+S G + P EP YCNA + + WEL L H HP V A L++GA
Sbjct: 665 SESQGSGVFLPELDEPEYCNAQNTALWELHALRRHYHPIVQRFAAHLIAGA 715
>sp|Q5XGZ8|NOC3L_XENLA Nucleolar complex protein 3 homolog OS=Xenopus laevis GN=noc3l PE=2
SV=1
Length = 795
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 24/45 (53%)
Query: 743 GGYNPRHREPSYCNADHVSWWELMVLASHVHPSVSTMAGTLLSGA 787
G Y P EP YCNA + + WEL L H HP V A L +GA
Sbjct: 669 GIYLPELDEPEYCNAQNSALWELHTLMRHYHPVVQIFAAHLSAGA 713
>sp|Q5R952|NOC3L_PONAB Nucleolar complex protein 3 homolog OS=Pongo abelii GN=NOC3L PE=2
SV=1
Length = 800
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 28/51 (54%)
Query: 737 SKSSLPGGYNPRHREPSYCNADHVSWWELMVLASHVHPSVSTMAGTLLSGA 787
S+S G + P EP YCNA + + WEL L H HP V A L++GA
Sbjct: 665 SESQGSGVFLPELDEPEYCNAQNTALWELHALRRHYHPIVQRFAVHLIAGA 715
>sp|Q6DRN3|NOC3L_DANRE Nucleolar complex protein 3 homolog OS=Danio rerio GN=noc3l PE=2
SV=1
Length = 800
Score = 48.1 bits (113), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 24/45 (53%)
Query: 743 GGYNPRHREPSYCNADHVSWWELMVLASHVHPSVSTMAGTLLSGA 787
G Y P P YCN + + WEL +L SH HP V A L+ GA
Sbjct: 671 GVYLPELDVPEYCNPQNTALWELHLLKSHYHPVVRKFAAHLMKGA 715
>sp|Q18DN4|HMU_HALWD Halomucin OS=Haloquadratum walsbyi (strain DSM 16790) GN=hmu PE=4
SV=1
Length = 9159
Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats.
Identities = 39/146 (26%), Positives = 66/146 (45%), Gaps = 20/146 (13%)
Query: 890 VDGDDYEVEGGDESDNEEIDNMLDSTDLSLVGDGDYDYDDLDKVADEDDDDLVGDASDLE 949
++ D + GD+S N+ D+ DS+ + GD + D D + ++DD GD S +
Sbjct: 8379 LEDDSSNQDSGDDSSNQ--DSGDDSSSQNDDGDNSSNQDSGDDSSSQNDD---GDNSSNQ 8433
Query: 950 MGAPDDSAEREDFDTNYFSHSDDDDDNVQLNIGAEDDGSDEGSKLGRRKRKRKSHKKAGA 1009
D S++ +D D + S+ D DD+ N DDG D S+ S++ +G
Sbjct: 8434 DSGDDSSSQNDDGDNS--SNQDSGDDSSSQN----DDGDDSSSQ--NDDGDNSSNQDSG- 8484
Query: 1010 TPFASLEDYQHLLDDNDPSEMKSAGE 1035
+D DD D S + +G+
Sbjct: 8485 ------DDSSSQNDDGDNSSNQDSGD 8504
Score = 37.0 bits (84), Expect = 0.75, Method: Composition-based stats.
Identities = 50/214 (23%), Positives = 93/214 (43%), Gaps = 30/214 (14%)
Query: 834 HQLIGQ-----EILSLAEVD----VPPEDLVFHKFYMN-KVNTTKK-PKKKKKKKGAEDE 882
HQL G+ L++ +VD V ++ + Y++ K ++T P+ + + +
Sbjct: 8328 HQLFGEYKSSERNLTVEDVDGGISVDVSNISYSASYVDIKADSTAPVPESALEDDSSNQD 8387
Query: 883 AAEELFDVD-GDDYEVEGGDESDNEEIDNMLDSTDLSLVGDGDYDYDDLDKVADEDDDDL 941
+ ++ + D GDD + D ++ D+ DS+ + GD + D D + ++DD
Sbjct: 8388 SGDDSSNQDSGDDSSSQNDDGDNSSNQDSGDDSSSQNDDGDNSSNQDSGDDSSSQNDD-- 8445
Query: 942 VGDASDLEMGAPDDSAEREDFDTNYFSHSDDDDDNVQLNIGAEDDGSDEGSKLGRRKRKR 1001
GD S + DDS+ + D + S +DD D N +D G D S+
Sbjct: 8446 -GDNSS-NQDSGDDSSSQNDDGDDSSSQNDDGD-----NSSNQDSGDDSSSQ--NDDGDN 8496
Query: 1002 KSHKKAGATPFASLEDYQHLLDDNDPSEMKSAGE 1035
S++ +G +D DD D S + +G+
Sbjct: 8497 SSNQDSG-------DDSSSQNDDGDNSSNQDSGD 8523
Score = 36.6 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 29/110 (26%), Positives = 50/110 (45%), Gaps = 8/110 (7%)
Query: 891 DGDDYEVEGGDESDNEEIDNMLDSTDLSLVGDGDYDYDDLDKVADEDDDDLVGDASDLEM 950
DGD+ + + + + D+ DS+ + GD + D D + ++DD GD S +
Sbjct: 8445 DGDNSSNQDSGDDSSSQNDDGDDSSSQNDDGDNSSNQDSGDDSSSQNDD---GDNSSNQD 8501
Query: 951 GAPDDSAEREDFDTNYFSHSDDD-----DDNVQLNIGAEDDGSDEGSKLG 995
D S++ +D D + S DD DD A G++ GS++G
Sbjct: 8502 SGDDSSSQNDDGDNSSNQDSGDDSSSQNDDGDNKPNSAAAVGAESGSEMG 8551
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.311 0.130 0.365
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 411,475,188
Number of Sequences: 539616
Number of extensions: 19464707
Number of successful extensions: 104252
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 289
Number of HSP's successfully gapped in prelim test: 1123
Number of HSP's that attempted gapping in prelim test: 70461
Number of HSP's gapped (non-prelim): 21116
length of query: 1048
length of database: 191,569,459
effective HSP length: 128
effective length of query: 920
effective length of database: 122,498,611
effective search space: 112698722120
effective search space used: 112698722120
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 67 (30.4 bits)