Query 001600
Match_columns 1047
No_of_seqs 40 out of 42
Neff 3.1
Searched_HMMs 29240
Date Tue Mar 26 17:22:40 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/001600.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_896-900//hhsearch_pdb/001600hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1i84_S Smooth muscle myosin he 1.0 1 1 56.0 9.1 306 167-473 856-1163(1184)
2 3vkg_A Dynein heavy chain, cyt 1.0 1 1 29.9 26.9 30 650-680 2392-2421(3245)
3 3na7_A HP0958; flagellar bioge 1.0 1 1 27.1 21.9 72 410-482 3-74 (256)
4 1c1g_A Tropomyosin; contractIl 1.0 1 1 26.8 40.0 280 334-648 1-280 (284)
5 2qag_B Septin-6, protein NEDD5 1.0 1 1 16.8 0.0 20 730-749 46-65 (427)
6 3q8t_A Beclin-1; autophagy, AT 1.0 1 1 16.4 9.8 62 594-655 7-68 (96)
7 3oja_A Leucine-rich immune mol 1.0 1 1 15.7 15.5 117 364-480 357-482 (487)
8 2qag_C Septin-7; cell cycle, c 1.0 1 1 15.4 0.0 63 515-577 315-384 (418)
9 2efr_A General control protein 1.0 1 1 14.5 18.9 149 61-248 2-150 (155)
10 3teq_A Stromal interaction mol 1.0 1 1 14.0 4.3 59 75-133 19-92 (101)
No 1
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=1.00 E-value=1 Score=56.04 Aligned_cols=306 Identities=15% Similarity=0.117 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99879998978887654312257567667987486887999864079989887663121457588876658999999987
Q 001600 167 KKILQQEHERLLDAQTLLNEREDHILSKLQELSRKEKELEASRANVEEKFKALNEEKSNLDLTLVSLLKREEAVIEREAS 246 (1047)
Q Consensus 167 eKkLqe~eeRL~e~qrlLNqREe~~~e~~~~l~~kEkeLEeak~kie~~~~~Lk~ke~dl~~rl~~l~~rEee~~~~~~~ 246 (1047)
.+.+.+-...+.+.+.-|..-+..+.+-...+...+.++..++..+......+...+..+......+..-+..+......
T Consensus 856 ~~El~~L~~eL~el~~~L~~le~~l~ele~~l~~Le~e~~~l~~~L~~e~~~l~~~e~~l~~l~~~~~~Le~~l~ele~e 935 (1184)
T 1i84_S 856 EEEMQAKDEELQRTKERQQKAEAELKELEQKHTQLCEEKNLLQEKLQAETELYAEAEEMRVRLAAKKQELEEILHEMEAR 935 (1184)
T ss_dssp HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 87869868999999754--5447999899975877653345689999999531899999999999762111221277777
Q 001600 247 LQKKEQKLLVSQETLAS--KESNEIQKIIANHESALRVKQSEFEAELAIKYKLAEDEIEKKRRAWELRDLDLGQREESLL 324 (1047)
Q Consensus 247 Le~KEkeLl~leEKL~a--RE~~EIQKLldeh~a~L~~KK~EFElElE~krKs~eeEle~K~~~~E~rEvel~h~Eekl~ 324 (1047)
++.-+..+..++..+.. .+-..+++-+++.+..+..-..+. ..++.+...+..++......+...+..+.+.+..+.
T Consensus 936 lee~ee~l~el~~e~~~le~el~~L~~eleele~~l~~l~~e~-~~le~~l~~l~~el~~lee~l~~l~~e~~~le~~i~ 1014 (1184)
T 1i84_S 936 IEEEEERSQQLQAEKKKMQQQMLDLEEQLEEEEAARQKLQLEK-VTADGKIKKMEDDILIMEDQNNKLTKERKLLEERVS 1014 (1184)
T ss_dssp HHHHHHC-------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999898899999999999999998888889999-999999999999888789999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 56544799788988766669998665499986668889975788887787799999879889974541699988878888
Q 001600 325 EREHDLEVQSRALVDKEKDLVERSHLLEEKENKLIAFEKEADLKKSLLQKEKEEVNIIKSDLQKSLSSLDEKKKQVNCAK 404 (1047)
Q Consensus 325 kREqaLe~k~~~lkEKEkdl~~Ksk~LKEkEksLkaeEK~le~ek~~L~~eKEel~~lK~dlEK~ra~~e~q~~qi~ee~ 404 (1047)
.-+..+......+...++.+...-..+.+-+..+...++.+..-...+..-..++..+...++.....+..-..++....
T Consensus 1015 ~l~~~l~~~e~k~~~lek~~~~le~el~ele~~le~~e~~~~ele~~~~~le~el~~l~~el~el~~el~~le~~l~~le 1094 (1184)
T 1i84_S 1015 DLTTNLAEEEEKAKNLTKLKNKHESMISELEVRLKKEEKSRQELEKIKRKLEGESSDLHEQIAELQAQIAELKAQLAKKE 1094 (1184)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 546542664456778999989999999999998678657989999977999866389899999999899
Q 001600 405 DKLEAMKSEAGELSVLEIKLKEELDVVRAQKLELMVETDKLQLEKAKFEAEWEMIDEKREELRKEAERV 473 (1047)
Q Consensus 405 E~LkitkeER~E~lrLQseLKeEId~~R~Qke~LlkEae~Lk~eKekFE~EWE~LDEKR~eL~KEa~~I 473 (1047)
..+......-.++-.-..+|..+|..+..+-..|..+.+..+......+.+-..|.....+|......+
T Consensus 1095 ~el~~l~~~le~l~~~~~~le~~l~~Le~eie~L~eeLee~~~~~~~le~q~~~L~~ele~L~~~Ieel 1163 (1184)
T 1i84_S 1095 EELQAALARLEDETSQKNNALKKIRELESHISDLQEDLESEKAARNKAEKQKRDLSEELEALKTELEDT 1163 (1184)
T ss_dssp ---------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999998898789999999999999999999998889999999999999999999999987
No 2
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*
Probab=1.00 E-value=1 Score=29.86 Aligned_cols=30 Identities=23% Similarity=0.242 Sum_probs=15.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 9999999984211247867766758464210
Q 001600 650 EEIQAESERLKKLEDLKIAVDYMAVSEMQRS 680 (1047)
Q Consensus 650 e~f~~~vE~lK~ckncg~~~~~~vLSdlq~s 680 (1047)
..|-..-+.++.+-.-|-++ .|+++||.+.
T Consensus 2392 ~~I~~~R~~YrpvA~r~s~L-yF~i~dL~~i 2421 (3245)
T 3vkg_A 2392 QEISEVSALYNPMALSCSRV-YFAMEELSQF 2421 (3245)
T ss_dssp HHHHHHHHHSHHHHHHHHHH-HHHHTGGGGS
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHHHHCC
T ss_conf 99999999869999999899-9999997307
No 3
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=1.00 E-value=1 Score=27.09 Aligned_cols=72 Identities=14% Similarity=0.101 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 2664456778999989999999999998678657989999977999866389899999999899998999998
Q 001600 410 MKSEAGELSVLEIKLKEELDVVRAQKLELMVETDKLQLEKAKFEAEWEMIDEKREELRKEAERVAVERVVVSK 482 (1047)
Q Consensus 410 tkeER~E~lrLQseLKeEId~~R~Qke~LlkEae~Lk~eKekFE~EWE~LDEKR~eL~KEa~~I~eEre~lek 482 (1047)
|.+.=.-++.||. +-.+|+.++++...|-++.++|..+...+......+...-..+.++...+..+=..+..
T Consensus 3 m~~~L~~L~~LQ~-lD~~i~~l~~~~~~lp~el~~le~~~~~l~~~~~~~~~~l~d~~~~~~~~e~~i~~~~~ 74 (256)
T 3na7_A 3 SNTHLKQLIEISH-LDKEIDSLEPLIREKRKDLDKALNDKEAKNKAILNLEEEKLALKLQVSKNEQTLQDTNA 74 (256)
T ss_dssp CHHHHHHHHHHHH-HHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 6899999999999-99999999999987589999999999999999999999999999999999978999999
No 4
>1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A
Probab=1.00 E-value=1 Score=26.76 Aligned_cols=280 Identities=13% Similarity=0.117 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 88988766669998665499986668889975788887787799999879889974541699988878888546542664
Q 001600 334 SRALVDKEKDLVERSHLLEEKENKLIAFEKEADLKKSLLQKEKEEVNIIKSDLQKSLSSLDEKKKQVNCAKDKLEAMKSE 413 (1047)
Q Consensus 334 ~~~lkEKEkdl~~Ksk~LKEkEksLkaeEK~le~ek~~L~~eKEel~~lK~dlEK~ra~~e~q~~qi~ee~E~LkitkeE 413 (1047)
++.|+.|=.-+......+...=..+...-..+ ...+..-...+..+...+......+..-...+......+.-...+
T Consensus 1 ~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~l---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (284)
T 1c1g_A 1 MDAIKKKMQMLKLDKENALDRADEAEADKKAA---EDRSKQLEDELVSLQKKLKATEDELDKYSEALKDAQEKLELAEKK 77 (284)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 93789999998876888999999999999999---988988899999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 45677899998999999999999867865798999997799986638989999999989999899999865636664599
Q 001600 414 AGELSVLEIKLKEELDVVRAQKLELMVETDKLQLEKAKFEAEWEMIDEKREELRKEAERVAVERVVVSKSLKDERDSLRQ 493 (1047)
Q Consensus 414 R~E~lrLQseLKeEId~~R~Qke~LlkEae~Lk~eKekFE~EWE~LDEKR~eL~KEa~~I~eEre~lek~~~~E~erLK~ 493 (1047)
...+-.-...++..|..+......+..+...+.......+..++.+......+......+..+...+..-+..-...+..
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 157 (284)
T 1c1g_A 78 ATDAEADVASLNRRIQLFEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAED 157 (284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 98779889999999998898899889889999999999998888899999988877751066799999999999998888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999975345565638999886454556687899888997644567632104899999899987679999999999
Q 001600 494 ERDAMRDQHKRDVDSLNREREEFMNKMVHEHSEWFTKIQQERADFLLGIEMQKRDLENCIEKRREELESSFREREKAFEE 573 (1047)
Q Consensus 494 Ek~~~r~~~krelEsL~~ekEsF~~kMehErs~~~eKiq~Erad~l~diElqkreLE~~i~~R~EEiE~~L~EREk~FEe 573 (1047)
-....... ...+..+......+.+.+. .+.-+...+...+..-..++ .
T Consensus 158 ~~~~~~~~-~~~~~~l~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~------------~ 205 (284)
T 1c1g_A 158 ADRKYEEV-ARKLVIIESDLERAEERAE-------------------LSEGKCAELEEEIKTVTNNL------------K 205 (284)
T ss_dssp HHHHHHHH-THHHHHHHHHHHHHHHHHH-------------------HHHHHHHHHHHHHHHHHHHH------------H
T ss_pred HHHHHHHH-HHHHHHHHHHHHHHHHHHH-------------------HHHHHHHHHHHHHHHHHHHH------------H
T ss_conf 99889999-9889988888998999898-------------------78879999999999999999------------9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999895531458999999999799999976799887643464446879998750999999999899999998984
Q 001600 574 EKMREFQQISSLKEKAEKELEQVTLEIKRLDLERMEINMDRQRRDREWAELNNSIEELMVQRQKLEEQRQLLHAD 648 (1047)
Q Consensus 574 ek~~EL~~IN~lkE~a~kElEev~lE~~rLekER~Ei~~~ke~le~e~aEm~kdIeeL~~ls~KLk~QRE~~~~E 648 (1047)
.....+..+......+...+..+.-++..+......+......+......+...+..+.....++..+.+.+...
T Consensus 206 ~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (284)
T 1c1g_A 206 SLEAQAEKYSQKEDKYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLKYKAISEELDHALND 280 (284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999758778889999999999999888989988999998899999999999999999998899999999999997
No 5
>2qag_B Septin-6, protein NEDD5; cell cycle, cell division, GTP-binding, nucleotide-binding, phosphorylation, acetylation, alternative splicing, coiled coil; HET: GDP GTP; 4.00A {Homo sapiens}
Probab=1.00 E-value=1 Score=16.79 Aligned_cols=20 Identities=5% Similarity=0.135 Sum_probs=12.4
Q ss_pred CCCCCCCCCCHHHHHHHHHH
Q ss_conf 66688887622699987998
Q 001600 730 ASASPPSLARFSWIKRFADL 749 (1047)
Q Consensus 730 ~~~SP~s~g~~SWlrKCTsk 749 (1047)
+.+-|+.+|.-++|+-.+..
T Consensus 46 aLvG~nGaGKSTLln~L~G~ 65 (427)
T 2qag_B 46 LCVGETGLGKSTLMDTLFNT 65 (427)
T ss_dssp EEECSTTSSSHHHHHHHHTS
T ss_pred EEECCCCCCHHHHHHHHHCC
T ss_conf 99999999999999999571
No 6
>3q8t_A Beclin-1; autophagy, ATG14L uvrag, apoptosis; 1.90A {Rattus norvegicus}
Probab=1.00 E-value=1 Score=16.37 Aligned_cols=62 Identities=16% Similarity=0.336 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 97999999767998876434644468799987509999999998999999989847999999
Q 001600 594 EQVTLEIKRLDLERMEINMDRQRRDREWAELNNSIEELMVQRQKLEEQRQLLHADREEIQAE 655 (1047)
Q Consensus 594 Eev~lE~~rLekER~Ei~~~ke~le~e~aEm~kdIeeL~~ls~KLk~QRE~~~~ERe~f~~~ 655 (1047)
+.+.-+...|..+...+.-.=+.++.+.+.+...|..+-..+..|..+-+.|.++++.|..+
T Consensus 7 ~~l~~eL~~l~~eE~~L~~eL~~lEke~~~l~~el~~le~E~~~L~~eE~~~w~eyn~~~~q 68 (96)
T 3q8t_A 7 EQLQRELKELALEEERLIQELEDVEKNRKVVAENLEKVQAEAERLDQEEAQYQREYSEFKRQ 68 (96)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999997599999999999999999866899999998788999
No 7
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=1.00 E-value=1 Score=15.73 Aligned_cols=117 Identities=11% Similarity=0.049 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 7578888778779999987988997454169998887888854---------6542664456778999989999999999
Q 001600 364 EADLKKSLLQKEKEEVNIIKSDLQKSLSSLDEKKKQVNCAKDK---------LEAMKSEAGELSVLEIKLKEELDVVRAQ 434 (1047)
Q Consensus 364 ~le~ek~~L~~eKEel~~lK~dlEK~ra~~e~q~~qi~ee~E~---------LkitkeER~E~lrLQseLKeEId~~R~Q 434 (1047)
....++.++...+.++...-..+++..++......+.....+. +..+..-..-+-.+..++-.|++..+..
T Consensus 357 ~~~~~~~~l~~~~~~le~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (487)
T 3oja_A 357 LRKQAKITLEQKKKALDEQVSNGRRAHAELDGTLQQAVGQIELQHATEEQSPLQLLRAIVKRYEEMYVEQQSVQNNAIRD 436 (487)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCCCCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHH
T ss_conf 99988899988899999999988888764112687750102100022135728999999999999889999875030133
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9986786579899999779998663898999999998999989999
Q 001600 435 KLELMVETDKLQLEKAKFEAEWEMIDEKREELRKEAERVAVERVVV 480 (1047)
Q Consensus 435 ke~LlkEae~Lk~eKekFE~EWE~LDEKR~eL~KEa~~I~eEre~l 480 (1047)
......+.+.|+.++++-+++-+.+|..=++..-...+...++..+
T Consensus 437 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 482 (487)
T 3oja_A 437 WDMYQHKETQLAEENARLKKLNGEADLALASANATLQELVVREQNL 482 (487)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
T ss_conf 5554347788887765455311044445674543799999999988
No 8
>2qag_C Septin-7; cell cycle, cell division, GTP-binding, nucleotide-binding, phosphorylation, acetylation, alternative splicing, coiled coil; HET: GDP GTP; 4.00A {Homo sapiens}
Probab=1.00 E-value=1 Score=15.40 Aligned_cols=63 Identities=21% Similarity=0.378 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99886454556687899888997644567632-------1048999998999876799999999999998
Q 001600 515 EFMNKMVHEHSEWFTKIQQERADFLLGIEMQK-------RDLENCIEKRREELESSFREREKAFEEEKMR 577 (1047)
Q Consensus 515 sF~~kMehErs~~~eKiq~Erad~l~diElqk-------reLE~~i~~R~EEiE~~L~EREk~FEeek~~ 577 (1047)
++++.|+.++.....+.+..-+.|-.-|+.+- ++.|..++.+++++-+.|.++.+.+++++..
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~e~~~~~~f~~~v~~~~~~~~~~e~~l~~~~~~~~~~l~~~~~~l~~~~~~ 384 (418)
T 2qag_C 315 SPLAQMEEERREHVAKMKKMEMEMEQVFEMKVKEKVQKLKDSEAELQRRHEQMKKNLEAQHKELEEKRRQ 384 (418)
T ss_dssp ----------------------------------------------------------------------
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 8677889999887999999999999999999999999999999989998999999999999999999999
No 9
>2efr_A General control protein GCN4 and tropomyosin 1 Al; destabilizing cluster, hydrophobic core, contractIle protein; 1.80A {Saccharomyces cerevisiae} PDB: 2efs_A 2d3e_A
Probab=1.00 E-value=1 Score=14.50 Aligned_cols=149 Identities=14% Similarity=0.107 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99599999999852222334001215679999997766668999856314677899730004886556787645667878
Q 001600 61 IASLEKAVHEIRAESAETKVAADSKFAEARCMVENAQKKFAEAEAKLHAAESLQAEANRYHRSAERKLQEVVAREDDLSR 140 (1047)
Q Consensus 61 VadLEKAL~Emr~E~AevK~saesKLaEA~aLv~~~eeKs~EvE~KL~aAea~~AEa~Rk~s~aeRKL~eVEaRE~~LrR 140 (1047)
+..||.-|.+. ++-|..||- ++.. ++.-.-.++.++-+|+++..+.---...+...|+.+++++..-.
T Consensus 2 ~~~lE~qlkea-ae~ad~Kye------EvaR----~E~dLEraEERae~aE~k~~eLEeeL~~v~~nlKsLE~seekas- 69 (155)
T 2efr_A 2 MKQLEDKVEEL-LSKNYHLEN------EVAR----LKKLLERAEERAELSEGKSAELEEELKTVTNNLKSLEAQAEKYS- 69 (155)
T ss_dssp HHHHHHHHHHH-HHHHHHHHH------HHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHH-HHHHHHHHH------HHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH-
T ss_conf 77789999999-998587789------9998----98788789999999999899999999988772103033456789-
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
Q ss_conf 78675543467779999987126999998799989788876543122575676679874868879998640799898876
Q 001600 141 RIASFKADCEEKEREIIRERQSLSDRKKILQQEHERLLDAQTLLNEREDHILSKLQELSRKEKELEASRANVEEKFKALN 220 (1047)
Q Consensus 141 erlSf~sE~ea~E~~~~~qRe~L~eweKkLqe~eeRL~e~qrlLNqREe~~~e~~~~l~~kEkeLEeak~kie~~~~~Lk 220 (1047)
.+-..-++.+-....-|..-+-++-.-.+.+..++++++...-.+.......+
T Consensus 70 ---------------------------qrEd~yEeqIk~L~~kLKEAE~RAE~AERsv~kLEk~id~lEd~L~~~Kek~~ 122 (155)
T 2efr_A 70 ---------------------------QKEDKYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLKYK 122 (155)
T ss_dssp ---------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf ---------------------------98999999999999999999998999997899999899999999999999899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 6312145758887665899999998787
Q 001600 221 EEKSNLDLTLVSLLKREEAVIEREASLQ 248 (1047)
Q Consensus 221 ~ke~dl~~rl~~l~~rEee~~~~~~~Le 248 (1047)
.-...+...+..|+.-.-.+......+.
T Consensus 123 ~i~~eLd~tl~el~~~~~~~~~~~~~~~ 150 (155)
T 2efr_A 123 AISEEMKQLEDKVEELLSKNYHLENEVA 150 (155)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCHHHHHHHHH
T ss_conf 9999999999999864630688877998
No 10
>3teq_A Stromal interaction molecule 1; signaling protein; 1.90A {Homo sapiens}
Probab=1.00 E-value=1 Score=14.05 Aligned_cols=59 Identities=20% Similarity=0.210 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH---------------HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
Q ss_conf 2223340012156799999977666---------------6899985631467789973000488655678764
Q 001600 75 SAETKVAADSKFAEARCMVENAQKK---------------FAEAEAKLHAAESLQAEANRYHRSAERKLQEVVA 133 (1047)
Q Consensus 75 ~AevK~saesKLaEA~aLv~~~eeK---------------s~EvE~KL~aAea~~AEa~Rk~s~aeRKL~eVEa 133 (1047)
+..-|..|+.+|..|..-++-+.+| ..+||.++++|...+.++.+-..+--.+-+.+|.
T Consensus 19 ~~~kk~~aekql~~A~e~~eKl~KKrsS~~gs~~~ahs~slD~vD~~Il~Ak~aL~evt~~l~Er~~RW~qIE~ 92 (101)
T 3teq_A 19 YNIKKQNAEKQLMVAKEGAEKIKKKRNTLFGTFHVAHSSSLDDVDHKILTAKQALSEATAALRERLHRWQQIEI 92 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHTCGGGGGTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCHHHHHHHHHHHHHHHHHHHHCHHEEEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 97711007878999999999999865121202310237977789999999999999999999999999999999
Done!