BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 001602
(1046 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q93YU5|EXOC4_ARATH Probable exocyst complex component 4 OS=Arabidopsis thaliana GN=SEC8
PE=1 SV=1
Length = 1053
Score = 1521 bits (3937), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 788/1066 (73%), Positives = 901/1066 (84%), Gaps = 35/1066 (3%)
Query: 1 MDIFDGLPISPEKAYLREELARIEVSWVAPRFDSLPHVVHILTSKDREGEVQILKDQNDI 60
M IF+GLP+ +K YLREELARI+ SW A RFDSLPHVVHILTSKDRE ++ ILK+Q+D+
Sbjct: 1 MGIFNGLPVPSDKTYLREELARIDESWAAARFDSLPHVVHILTSKDREADIHILKEQSDV 60
Query: 61 IEEVVDEVVHAYHTGFNKAIQNYSQILRLFSESAESIKELKVDLAEAKRRLGTRNKQLHQ 120
+EEVVDEVVHAYH GFNKAIQNYSQILRLFSES E I +LK DLAEAK+ LG RNKQLHQ
Sbjct: 61 VEEVVDEVVHAYHGGFNKAIQNYSQILRLFSESTEKIGDLKHDLAEAKQSLGARNKQLHQ 120
Query: 121 LWYRSVTLRHIISLLDQIEGIAKVPARIEKLIAGKQYYAAVQLHAQSALMLEREGLQTVG 180
LWYRSVTLRHIISLLDQIEGIAKVP+RIEKLIA KQ+YAA+Q++ QS+LMLEREGLQTVG
Sbjct: 121 LWYRSVTLRHIISLLDQIEGIAKVPSRIEKLIADKQFYAAIQVYLQSSLMLEREGLQTVG 180
Query: 181 ALQDVRSELTKLRGVLFYKVLEDLHAHLYNRGEYSSAVLSMHEMDDEVPTTVAVAYTTNN 240
ALQDVRSELTKLRG LF+K+L+DLHAHLYNRGEYSS S++E DDEVPTT AVA + +
Sbjct: 181 ALQDVRSELTKLRGALFFKILDDLHAHLYNRGEYSSVASSIYERDDEVPTTTAVAASRMS 240
Query: 241 SQPLSRRTR-LKGDNQFGVHGLADGSH-------SSTFDGHDEDGSLEAHDETSLDGLSI 292
SQPLSRRTR LKGD+QFGV GL +GS+ SS+FDGHDE+ S+E HDE++ D
Sbjct: 241 SQPLSRRTRTLKGDSQFGVRGLTNGSYRTASNDESSSFDGHDEEDSVE-HDESTADTARN 299
Query: 293 G------------WLANSTPDEFVEAIRKSDAPLHVKYLQTMVECLCILGKVAAAGAIIC 340
G WL++STPDEF+EA+RKSD PLHVKYLQT+V+CLC+LGKVAAAGAIIC
Sbjct: 300 GTDSKLLSHQLPPWLSDSTPDEFIEAVRKSDDPLHVKYLQTLVQCLCMLGKVAAAGAIIC 359
Query: 341 QRLRPTIHEIITSKIKAHAQLINSSRSAIGQAAQTGTTGLHFMKGQLRSYQLPKQKRQNG 400
Q+LRPTIHEII SKIKAH + N S+SA Q ++ GLH +KGQ +Y+L K+K QNG
Sbjct: 360 QKLRPTIHEIIISKIKAHLETTNLSKSACSQGDRSVAAGLHLIKGQSEAYRLSKEKPQNG 419
Query: 401 ISLSGTLLAVSPVSALMAPMGKAQAAAKELLDSILDSVVRIFENHVVVGELLESRSSRHD 460
IS SGT LAVSPVS LMAP GKAQAAAKELLDSILD++V+IFENHVV+GELLE ++S+HD
Sbjct: 420 ISNSGTHLAVSPVSPLMAPGGKAQAAAKELLDSILDTIVKIFENHVVIGELLEMKASQHD 479
Query: 461 INTPKSMIADANWNPDSEAS-VTGGYSIGFSMTVLQSECQQLICEILRATPEAASADAAV 519
INTP+S+ D NWN +SEAS TGGY+I F +TVLQSECQQLICEILRATPEAASADAA
Sbjct: 480 INTPRSLPTDVNWNTESEASQATGGYTISFPLTVLQSECQQLICEILRATPEAASADAAA 539
Query: 520 QTARLASKAPSKEKSYAYRDGSEDGLTFAFRFTDATISIPNQGADLIRQGWSRRGTNVLQ 579
QTA+LA KA RD EDGLTF FRFTDAT+SI NQGADLIRQGW +R N
Sbjct: 540 QTAKLAKKA----PKKDKRDAPEDGLTFTFRFTDATVSISNQGADLIRQGWGKRAPNASL 595
Query: 580 EGYGTAAVLPEQGIYLAASIYRPVLQFTDKVASMLPQKYSQLGNDGLLAFVENFVKDHLL 639
EGYG+AAVLPEQGIYLAASIYRPVLQFTDK+ SMLP+K+SQL NDGLL F ENFVKDHLL
Sbjct: 596 EGYGSAAVLPEQGIYLAASIYRPVLQFTDKITSMLPKKHSQLVNDGLLTFTENFVKDHLL 655
Query: 640 PTMFVDYRKGVQQAISSPAAFRPRAHTAATYVPSIEKGRPVLQGLLAIDFLAKEVLGWAQ 699
PTMFVDYRKGVQQAISS AAFRPRAHT TY ++EKGRP+LQGLLAID LAKEVLGWAQ
Sbjct: 656 PTMFVDYRKGVQQAISSAAAFRPRAHT-TTYTATVEKGRPILQGLLAIDLLAKEVLGWAQ 714
Query: 700 AMPKFAADLVKYVQTFLERTYERCRTSYMEAVLEKQSYMLIGRHDIDKLLRLEPASASLP 759
AMPKFA DLVKYVQTFLERT+ERCRTSYMEAVLEK SYMLIGRHDI+KL+RL+ ASA LP
Sbjct: 715 AMPKFATDLVKYVQTFLERTFERCRTSYMEAVLEKLSYMLIGRHDIEKLMRLDAASACLP 774
Query: 760 NGQLDSVSSVNDAETPGVESELRELFLSLRPIRQENLIHDENKLILLASLSDSLEYVADS 819
+ +VS +E G E EL +LFLSLRPI+Q+NLI D+NKLILLASLSDSLEYVADS
Sbjct: 775 STLGHAVSH---SEAVGTEVELSDLFLSLRPIKQDNLIRDDNKLILLASLSDSLEYVADS 831
Query: 820 IERLGRATLRESNLVEESRKPHHNRSSSAPSRDLASFADEYRKLAIDCLKVLRVEMQLET 879
IERLG+A R ++ E ++R+ +A R+LASFADEYRKLA DCLKVLRVEMQLET
Sbjct: 832 IERLGQAVPRVASQAE-----GNSRNQAASPRNLASFADEYRKLATDCLKVLRVEMQLET 886
Query: 880 IFHLQEMTSRDYLEDQDAEEPDDFIISLTSQITRRDEEMAPFIAEEKRNYIFGGICGIAA 939
+FHLQEMT+R+YLED+DAEEPDDF+ISLTSQITRR+E MAPFI+ EKRNY+FGGI GIAA
Sbjct: 887 VFHLQEMTNREYLEDEDAEEPDDFVISLTSQITRREEGMAPFISGEKRNYVFGGISGIAA 946
Query: 940 NASIKALADMKNINLFGVQQICRNSIALEQALAAIPSIDSEAVRRRLDRVRTYYELLNMP 999
NASIKALADM++INLFGVQQICRN+IA+EQA+AAIP ID E V++ LDRVRTY+ELLNMP
Sbjct: 947 NASIKALADMRSINLFGVQQICRNTIAVEQAMAAIPYIDGETVQQNLDRVRTYFELLNMP 1006
Query: 1000 FEALLAFVTEHENLFTTTEYASLLKVNVPGREIPSDALDRVSEILS 1045
FEALLAF+ EH+ +FT TEY++LLKVNVPGR+ PSDA R+ EILS
Sbjct: 1007 FEALLAFIAEHDQMFTPTEYSNLLKVNVPGRDTPSDAQSRLLEILS 1052
>sp|Q54P76|EXOC4_DICDI Exocyst complex component 4 OS=Dictyostelium discoideum GN=exoc4 PE=3
SV=1
Length = 1182
Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 111/518 (21%), Positives = 212/518 (40%), Gaps = 101/518 (19%)
Query: 574 GTNVLQEGYGTAAVLP--EQGIYLAASIYRPVLQFTDKVASMLPQK-------------- 617
G + + G AV+ + Y IY +++FTD + L +
Sbjct: 640 GADAIDSNSGGPAVISIFKASQYNVTPIYPMIVKFTDHLDKTLRDRTGTPTTTKTTTTIT 699
Query: 618 -------YSQLGNDGLL-AFVENFVKDHLLPTMFVDYRKGVQQAISSPAAFRPRAHTAAT 669
++Q GLL ++++FV + L + DY+ +I S AF+P
Sbjct: 700 TTTTNSYHNQNSKKGLLRLYIDDFVHRNFLQHIKNDYKDRFAHSIESTEAFKPLERYKLV 759
Query: 670 YVPSIEKGRPVLQGLLAIDFLAKEVLGWAQAMPKFAADLVKYVQTFLERTYERCRTSYME 729
+ +++ +P+L L I E+ AM + + +Q L R YE+C + + +
Sbjct: 760 F--RLKETKPILNSTLQIFQFVIELFSDIVAMSHYVVEFGAIIQVSLLRYYEKCLSKFSQ 817
Query: 730 AVLEKQSYMLIGRHDIDKLLRLEPASASLPNGQLDSVSSVNDAETPGVESELRELFLSL- 788
+ + L+ D+ K L AS ++ + + D V+ D+ E +L +
Sbjct: 818 EIDPTLTNQLLNT-DLYKYLL---ASLAVSSKKQD-VAKFQDSREEEYEFKLESDLFNHP 872
Query: 789 -RPIRQENLIHDENKLILLASLSDSLEYVADSIERL--------------GRATLRESNL 833
+P+ + LI + KL +LA++S SL ++AD I +L + ++
Sbjct: 873 EKPVLKNQLILNIEKLTMLANMSHSLNWLADKIVQLLIVQEDQKEKYTQQQQQQQQQQQQ 932
Query: 834 VEESRKP-----------------HHNRSSSAPSRDLASFADEYRKLAIDCLKV------ 870
V+ + P N S++ S + ++ +I+ LK
Sbjct: 933 VDSIKTPSKLNSGINSGGNSTASNKENNSTTTGSNNFIGTFNQMSAESIEALKTMEEPIK 992
Query: 871 ----------------LRVEMQLETIFHLQEMTSRDYLEDQDAEEPDDFIISLTSQITRR 914
LR+E ++ + L+ Y+ +++ +PD FI+ L ++
Sbjct: 993 DIAQRFKDLSKRCLLALRIEYRIHCFYFLEGFKRAQYMCEEERTDPDSFIVELNKDLSAS 1052
Query: 915 DEEMAPFIAEEKRNYIFGGICGIAANASIKALADMKNINLFGVQQICRNSIALEQALAAI 974
+E M+ ++ +K N++F GI + I L + +IN GV ++C+N L+Q L+ I
Sbjct: 1053 EEMMSIYLTSDKCNFLFSGIAKLIGKLLISKLVHVNSINDNGVAKLCKNVFTLQQNLSNI 1112
Query: 975 PSIDSEAVRRRL--DRVRTYY-------ELLNMPFEAL 1003
V+R + DR+R +Y ELLN E +
Sbjct: 1113 ------IVKREIFFDRIRQFYQALSAEDELLNYLLEKM 1144
Score = 80.5 bits (197), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 102/221 (46%), Gaps = 15/221 (6%)
Query: 19 ELARIEVSWVAPRFDSLPHVVHILTSKDREGEVQILKDQN---------DIIEEV---VD 66
E +++ + ++ S+P H + + R + ++ N D ++EV D
Sbjct: 5 EEKKLDENKISKVLSSIPEQYHKTSFQARRTALDYMRSSNRKELLNQIGDWLDEVNVETD 64
Query: 67 EVVHAYHTGFNKAIQNYSQILRLFSESAESIKELKVDLAEAKRRLGTRNKQLHQLWYRSV 126
+V Y GFNK+I NYS+IL S + + ++ E + + + +LW R++
Sbjct: 65 NIVDVYFQGFNKSIHNYSRILEFMGTSHGNALLMSKEVEETNKLINFNGTGIERLWKRNL 124
Query: 127 TLRHIISLLDQIEGIAKVPARIEKLIAGKQYYAAVQLHAQSALMLEREGLQTVGALQDVR 186
++I +L+++E + KVP + K I G + A + S L L V AL D+R
Sbjct: 125 EYYYMIEILEKMEELKKVPDLLNKYIKGNHFVHAANILVNSISTLNERDLVNVNALMDLR 184
Query: 187 SELTKLRGVLFYKVLEDLHAHLYNRGEYSSAVLSMHEMDDE 227
L + + ++E L+ H+Y + + S L E DDE
Sbjct: 185 QMLVEKKESFKDMLVEKLNDHIYLKTKSS---LKAFEYDDE 222
>sp|Q9VNH6|EXOC4_DROME Exocyst complex component 4 OS=Drosophila melanogaster GN=sec8 PE=1
SV=3
Length = 985
Score = 100 bits (249), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 115/480 (23%), Positives = 222/480 (46%), Gaps = 62/480 (12%)
Query: 589 PEQGIYLAASIYRPVLQFTDKVASMLPQKYSQLGNDGLLAFVENFVKDHLLPTMFVDYRK 648
P+Q I +Y P++ + ++ + + K Q + L F++N++KD L + +
Sbjct: 495 PDQSII--TKVYLPLMGYIKEIENFMKCKPGQPCS--LHDFLDNYIKDTFLTK---GHNR 547
Query: 649 GVQQAISSPAAFRP--RAHTAATYVPSIEKGRPVLQGLLAIDFLAKEVLGWAQAMPKFAA 706
+Q I S + + R + + ++ RP+LQ + ++ E Q +P ++
Sbjct: 548 NLQLTIESLSKNQDAWRTIISPEEIKALNLSRPLLQSTVMVERRLMETKNLIQDLPCYSE 607
Query: 707 DLVKYVQTFLERTYERCRTSYMEAVL----EKQSYML--IGRHDIDKLLRLEP------- 753
DL+K V L+ E C+ +Y V +K+ Y + + DI + L+ P
Sbjct: 608 DLLKMVCALLKAYREICQAAYRGIVQPDSEDKRIYSVAWLKDEDISRFLKTLPNWTDLKT 667
Query: 754 -ASASLPNGQLDSVS-SVNDAETPGV-------ESELRELFLSLRPIRQENLIHDENKLI 804
+ S N +L S ++ E+P E+E+ L I Q+ ++ + + L
Sbjct: 668 YSQKSRHNRKLHRGSFEPSEEESPLQVQQRNIREAEMLTSNLGEGGITQQEILVEISVLK 727
Query: 805 LLASLSDSLEYVADSIERLGRATLRESNLVEESRKPHHNRSSSAPS-------------R 851
LA L +S+E+ + R S + R+P N ++ P+ +
Sbjct: 728 ELAILQESMEWF----------SCRVSEFANDLRRPLVNGLNAVPAECGADIAVKDGTIK 777
Query: 852 DLASFADEYRKLAIDCLKVLRVEMQLETIFHLQEMTS---RDYLEDQD-AEEPDDFIISL 907
+ + A E+ +LA CL VL +E++++ +L+ +S Y+ +D EPD + L
Sbjct: 778 VMTNLALEFDELANTCLLVLHLEVRVQCFHYLRSKSSVRTNSYVGSKDDILEPDRQVQVL 837
Query: 908 TSQITRRDEEMAPFIAEEKRNYIFGGICGIAANASIKALADMKNINLFGVQQICRNSIAL 967
T +++ DE + + K YIF G+ +A+ I+A +++I+ VQ++CRN+IAL
Sbjct: 838 TKRLSEMDEAFSATLHPRKTRYIFEGLAHLASRILIQASNYLEHIDQITVQRMCRNAIAL 897
Query: 968 EQALAAIPSIDSEAVRRRLDRVRTYYELLNMPFEALLAFVTEHENLFTTTEYASLLKVNV 1027
+Q L+ I + A LD+ R +YELL M + +L + E F+ + + L+++
Sbjct: 898 QQTLSNITASREVA----LDQARHFYELLCMEPDEILNALLERGTQFSEMQLLNALQLSC 953
Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 90/171 (52%), Gaps = 9/171 (5%)
Query: 43 TSKDREGEVQILKDQNDIIEEVVDEVVHAYHTGFNKAIQNYSQILRLFSESAESIKELKV 102
T+++R+ E Q ++ + + ++E+V + + + +SQ+ + S E I +K
Sbjct: 38 TTEERQKEKQKIEAEFKRSDLRLNELVSRHDQQLTQVLPLFSQVSSEVTASRERIHAVKE 97
Query: 103 DLAEAKRRLGTRNKQLHQLWYRSVTLRHIISLLDQIEGIAKVPARIEKLIAGKQYYAAVQ 162
+L KR L R +L ++W +V ++++ +L+QI+ + KVP R+ A +QY
Sbjct: 98 NLGVCKRLLQCRRDELRKMWMDAVQHKYVLEMLEQIQELRKVPQRVVGYTAKRQY----- 152
Query: 163 LHAQSAL---MLEREG-LQTVGALQDVRSELTKLRGVLFYKVLEDLHAHLY 209
LHA AL + G LQ V L D+R++L R L+ ++ E+L +Y
Sbjct: 153 LHASKALTDALTTLNGPLQAVEGLSDLRTDLQTRRQQLYQRLHEELVTQVY 203
>sp|Q62824|EXOC4_RAT Exocyst complex component 4 OS=Rattus norvegicus GN=Exoc4 PE=1 SV=1
Length = 975
Score = 93.2 bits (230), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 131/576 (22%), Positives = 252/576 (43%), Gaps = 72/576 (12%)
Query: 519 VQTARLASKAPSKEKSYAYRDGSEDGLTFA-----------FRFTDAT--ISIPNQGADL 565
++ R AS+ PS + SYA G E FA F+F ++ IS+ +
Sbjct: 404 MKNTRTASE-PSAQLSYA-STGREFAAFFAKKKPQRPKNSLFKFESSSHAISMSAYLREQ 461
Query: 566 IRQGWSRRGT------NVLQEGYGTAAVLPEQGIYLAASIYRPVLQFTDKVASML---PQ 616
R+ +SR G + L EG GT V + G I+ P+L+F ++ L P
Sbjct: 462 RRELYSRSGELQGGPDDNLIEGGGTKFVC-KPGARNITVIFHPLLRFIQEIEHALGLGPA 520
Query: 617 KYSQLGNDGLLAFVENFVKDHLLPTMFVDYRKGVQQAISSPAAFRPRAHTAATYVPSIEK 676
K L F+ ++K+ L + + K ++ + + A+ V ++
Sbjct: 521 KQCLLRE-----FLTIYIKNIFLNQVLTEINKEIEGVTKTSDPLKILANADTMKVLGVQ- 574
Query: 677 GRPVLQGLLAIDFLAKEVLGWAQAMPKFAADLVKYVQTFLERTYERCRTSYMEAVLEKQS 736
RP+LQ + ++ ++++ + ++ + V L+ + C T+Y +++ +
Sbjct: 575 -RPLLQSTIIVEKTVQDLMNLMHDLSAYSDQFLNMVCVKLQEYKDTCSTAY-RGIVQSEE 632
Query: 737 YMLIGRH-----DIDKLLRLEPASASLPN----GQLDSVSSVNDAETP------GVESEL 781
++I DI +LL+ SLPN Q + + E G ESE+
Sbjct: 633 KLVISASWAKDDDISRLLK------SLPNWTNMAQPKQLRPKREEEEDFIRAAFGKESEV 686
Query: 782 RELFLSLRPIRQENLIHDENKLILLASLSDSLEYVADSIERLGRATLRESNLVEESRKPH 841
L + I ++++ D + L LA++ +SLE++A + ++L S ++ +++ H
Sbjct: 687 LIGNLGDKLIPPQDILRDVSDLKALANMHESLEWLAGRTKS-AFSSLSASQMLSPAQESH 745
Query: 842 HNRS----SSAPSRDLASFADEYRKLAIDCLKVLRVEMQLETIFHLQEMTSR-DY--LED 894
N S + L+ A ++ +A CL VL +E+++ +L + +Y + +
Sbjct: 746 VNMDLPPVSEQIMQTLSELAKSFQDMADRCLLVLHLEVRVHCFHYLIPLAKEGNYAIVAN 805
Query: 895 QDAEEPDDFIISLTSQITRRDEEMAPFIAEEKRNYIFGGICGIAANASIKALADMKNINL 954
++ + D ++ L I+ +E M+ + + K YIF G+ + + I + I+
Sbjct: 806 VESMDYDPLVVKLNKDISAMEEAMSASLQQHKFQYIFEGLGHLISCILINGAQYFRRISE 865
Query: 955 FGVQQICRNSIALEQALAAIPSIDSEAVRRRLDRVRTYYELLNMPFEALLAFVTEHENLF 1014
G++++CRN L+Q L I ++ EA LD R YYE+L + LL V + +
Sbjct: 866 SGIKKMCRNIFVLQQNLTNI-TMSREA---DLDFARQYYEMLYNTADELLNLVVDQGVKY 921
Query: 1015 TTTEYASLL------KVNVPGREIPSDALDRVSEIL 1044
T EY L + V + + L R+ EI+
Sbjct: 922 TELEYIHALTLLHRSQTGVGDQTTQNTRLQRLKEII 957
Score = 90.9 bits (224), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 90/165 (54%), Gaps = 1/165 (0%)
Query: 45 KDREGEVQILKDQNDIIEEVVDEVVHAYHTGFNKAIQNYSQILRLFSESAESIKELKVDL 104
+DRE E L++ + + +DE++ ++T AI+ Y I + S IK++K +L
Sbjct: 38 EDRENEKGRLEEAYEKCDRDLDELIVQHYTELTTAIRTYQSITERITNSRNKIKQVKENL 97
Query: 105 AEAKRRLGTRNKQLHQLWYRSVTLRHIISLLDQIEGIAKVPARIEKLIAGKQYYAAVQLH 164
K L + +L +LW + +H+++LLD+IE I +VP ++E+ +A K Y +A +
Sbjct: 98 LSCKMLLHCKRDELRKLWIEGIEHKHVLNLLDEIENIKQVPQKLEQCMASKHYLSATDML 157
Query: 165 AQSALMLEREGLQTVGALQDVRSELTKLRGVLFYKVLEDLHAHLY 209
+ LE LQ G L D+R EL + L ++E+LH HLY
Sbjct: 158 VSAVESLEGPLLQVEG-LSDLRLELHSKKMNLHLVLIEELHRHLY 201
>sp|O35382|EXOC4_MOUSE Exocyst complex component 4 OS=Mus musculus GN=Exoc4 PE=1 SV=2
Length = 975
Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 131/576 (22%), Positives = 250/576 (43%), Gaps = 72/576 (12%)
Query: 519 VQTARLASKAPSKEKSYAYRDGSEDGLTFA-----------FRFTDAT--ISIPNQGADL 565
++ R AS+ PS + SYA G E FA F+F ++ IS+ +
Sbjct: 404 MKNTRTASE-PSAQLSYA-STGREFAAFFAKKKPQRPKNSLFKFESSSHAISMSAYLREQ 461
Query: 566 IRQGWSRRGT------NVLQEGYGTAAVLPEQGIYLAASIYRPVLQFTDKVASML---PQ 616
R+ +SR G + L EG GT V + G I+ P+L+F ++ L P
Sbjct: 462 RRELYSRSGELQGGPDDNLIEGGGTKFVC-KPGARNITVIFHPLLRFIQEIEHALGLGPA 520
Query: 617 KYSQLGNDGLLAFVENFVKDHLLPTMFVDYRKGVQQAISSPAAFRPRAHTAATYVPSIEK 676
K L F+ ++K L + + K ++ + + A+ V ++
Sbjct: 521 KQCPLRE-----FLTVYIKSIFLNQVLAEINKEIEGVTKTSDPLKILANADTMKVLGVQ- 574
Query: 677 GRPVLQGLLAIDFLAKEVLGWAQAMPKFAADLVKYVQTFLERTYERCRTSYMEAVLEKQS 736
RP+LQ + ++ ++++ + ++ + V L+ + C T+Y +++ +
Sbjct: 575 -RPLLQSTIIVEKTVQDLMNLMHDLSAYSDQFLNMVCVKLQEYKDTCSTAY-RGIVQSEE 632
Query: 737 YMLIGRH-----DIDKLLRLEPASASLPN----GQLDSVSSVNDAETP------GVESEL 781
++I DI +LL+ SLPN Q + + E G ESE+
Sbjct: 633 KLVISASWAKDDDISRLLK------SLPNWTNMAQPKQLRPKREEEEDFIRAAFGKESEV 686
Query: 782 RELFLSLRPIRQENLIHDENKLILLASLSDSLEYVADSIERLGRATLRESNLVEESRKPH 841
L + I ++++ D + L LA++ +SLE++A + + L S ++ +++ H
Sbjct: 687 LIGNLGDKLIPPQDILRDVSDLKALANMHESLEWLAGRTKS-AFSNLSTSQMLSPAQESH 745
Query: 842 HNRS----SSAPSRDLASFADEYRKLAIDCLKVLRVEMQLETIFHLQEMTSR-DY--LED 894
N S + L+ A ++ +A CL VL +E+++ +L + +Y + +
Sbjct: 746 VNMDLPPVSEQIMQTLSELAKTFQDMADRCLLVLHLEVRVHCFHYLIPLAKEGNYAIVAN 805
Query: 895 QDAEEPDDFIISLTSQITRRDEEMAPFIAEEKRNYIFGGICGIAANASIKALADMKNINL 954
++ + D ++ L I+ +E M+ + + K YIF G+ + + I + I+
Sbjct: 806 VESMDYDPLVVKLNKDISAMEEAMSASLQQHKFQYIFEGLGHLISCILINGAQYFRRISE 865
Query: 955 FGVQQICRNSIALEQALAAIPSIDSEAVRRRLDRVRTYYELLNMPFEALLAFVTEHENLF 1014
G++++CRN L+Q L I ++ EA LD R YYE+L + LL V + +
Sbjct: 866 SGIKKMCRNIFVLQQNLTNI-TMSREA---DLDFARQYYEMLYNTADELLNLVVDQGVKY 921
Query: 1015 TTTEYASLL------KVNVPGREIPSDALDRVSEIL 1044
T EY L + V + + L R+ EI+
Sbjct: 922 TELEYIHALTLLHRSQTGVGDQTTQNTRLQRLKEII 957
Score = 90.5 bits (223), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 90/165 (54%), Gaps = 1/165 (0%)
Query: 45 KDREGEVQILKDQNDIIEEVVDEVVHAYHTGFNKAIQNYSQILRLFSESAESIKELKVDL 104
+DRE E L++ + + +DE++ ++T AI+ Y I + S IK++K +L
Sbjct: 38 EDRENEKGRLEEAYEKCDRDLDELIVQHYTELTTAIRTYQSITERITNSRNKIKQVKENL 97
Query: 105 AEAKRRLGTRNKQLHQLWYRSVTLRHIISLLDQIEGIAKVPARIEKLIAGKQYYAAVQLH 164
K L + +L +LW + +H+++LLD+IE I +VP ++E+ +A K Y +A +
Sbjct: 98 LSCKMLLHCKRDELRKLWIEGIEHKHVLNLLDEIENIKQVPQKLEQCMASKHYLSATDML 157
Query: 165 AQSALMLEREGLQTVGALQDVRSELTKLRGVLFYKVLEDLHAHLY 209
+ LE LQ G L D+R EL + L ++E+LH HLY
Sbjct: 158 VSAVESLEGPLLQVEG-LSDLRLELHSKKMNLHLVLIEELHRHLY 201
>sp|Q96A65|EXOC4_HUMAN Exocyst complex component 4 OS=Homo sapiens GN=EXOC4 PE=1 SV=1
Length = 974
Score = 91.3 bits (225), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 126/545 (23%), Positives = 239/545 (43%), Gaps = 66/545 (12%)
Query: 519 VQTARLASKAPSKEKSYAYRDGSEDGLTFA-----------FRFTDAT--ISIPNQGADL 565
++ R AS+ PS + SYA G E FA F+F ++ IS+ +
Sbjct: 403 MKNTRTASE-PSAQLSYA-STGREFAAFFAKKKPQRPKNSLFKFESSSHAISMSAYLREQ 460
Query: 566 IRQGWSRRGT------NVLQEGYGTAAVLPEQGIYLAASIYRPVLQFTDKVASML---PQ 616
R+ +SR G + L EG GT V + G I+ P+L+F ++ L P
Sbjct: 461 RRELYSRSGELQGGPDDNLIEGGGTKFVC-KPGARNITVIFHPLLRFIQEIEHALGLGPA 519
Query: 617 KYSQLGNDGLLAFVENFVKDHLLPTMFVDYRKGVQQAISSPAAFRPRAHTAATYVPSIEK 676
K L F+ ++K+ L + + K ++ + + A+ V ++
Sbjct: 520 KQCPLRE-----FLTVYIKNIFLNQVLAEINKEIEGVTKTSDPLKILANADTMKVLGVQ- 573
Query: 677 GRPVLQGLLAIDFLAKEVLGWAQAMPKFAADLVKYVQTFLERTYERCRTSYMEAVLEKQS 736
RP+LQ + ++ +++L + ++ + V L+ + C +Y +++ +
Sbjct: 574 -RPLLQSTIIVEKTVQDLLNLMHDLSAYSDQFLNMVCVKLQEYKDTCTAAY-RGIVQSEE 631
Query: 737 YMLIGRH-----DIDKLLRLEPASASLPN----GQLDSVSSVNDAETP------GVESEL 781
++I DI +LL+ SLPN Q + + E G ESE+
Sbjct: 632 KLVISASWAKDDDISRLLK------SLPNWMNMAQPKQLRPKREEEEDFIRAAFGKESEV 685
Query: 782 RELFLSLRPIRQENLIHDENKLILLASLSDSLEYVADSIERLGRATLRESNLVEESRKPH 841
L + I ++++ D + L LA++ +SLE++A S + + L S ++ ++ H
Sbjct: 686 LIGNLGDKLIPPQDILRDVSDLKALANMHESLEWLA-SRTKSAFSNLSTSQMLSPAQDSH 744
Query: 842 HNRS----SSAPSRDLASFADEYRKLAIDCLKVLRVEMQLETIFHLQEMTSR-DY--LED 894
N S + L+ A ++ +A CL VL +E+++ +L + +Y + +
Sbjct: 745 TNTDLPPVSEQIMQTLSELAKSFQDMADRCLLVLHLEVRVHCFHYLIPLAKEGNYAIVAN 804
Query: 895 QDAEEPDDFIISLTSQITRRDEEMAPFIAEEKRNYIFGGICGIAANASIKALADMKNINL 954
++ + D ++ L I+ +E M+ + + K YIF G+ + + I + I+
Sbjct: 805 VESMDYDPLVVKLNKDISAIEEAMSASLQQHKFQYIFEGLGHLISCILINGAQYFRRISE 864
Query: 955 FGVQQICRNSIALEQALAAIPSIDSEAVRRRLDRVRTYYELLNMPFEALLAFVTEHENLF 1014
G++++CRN L+Q L I ++ EA LD R YYE+L + LL V + +
Sbjct: 865 SGIKKMCRNIFVLQQNLTNI-TMSREA---DLDFARQYYEMLYNTADELLNLVVDQGVKY 920
Query: 1015 TTTEY 1019
T EY
Sbjct: 921 TELEY 925
Score = 90.9 bits (224), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 114/225 (50%), Gaps = 13/225 (5%)
Query: 45 KDREGEVQILKDQNDIIEEVVDEVVHAYHTGFNKAIQNYSQILRLFSESAESIKELKVDL 104
+DRE E L++ + + +DE++ ++T AI+ Y I + S IK++K +L
Sbjct: 38 EDRENEKGRLEEAYEKCDRDLDELIVQHYTELTTAIRTYQSITERITNSRNKIKQVKENL 97
Query: 105 AEAKRRLGTRNKQLHQLWYRSVTLRHIISLLDQIEGIAKVPARIEKLIAGKQYYAAVQLH 164
K L + +L +LW + +H+++LLD+IE I +VP ++E+ +A K Y +A +
Sbjct: 98 LSCKMLLHCKRDELRKLWIEGIEHKHVLNLLDEIENIKQVPQKLEQCMASKHYLSATDML 157
Query: 165 AQSALMLEREGLQTVGALQDVRSELTKLRGVLFYKVLEDLHAHLYNRGEYSSAVLSMHEM 224
+ LE LQ G L D+R EL + L ++++LH HLY + +S V+ ++
Sbjct: 158 VSAVESLEGPLLQVEG-LSDLRLELHSKKMNLHLVLIDELHRHLYIKS--TSRVVQRNKE 214
Query: 225 DDEVPTTVAVAYTTNNSQPLSRRTRLKGDNQFGVHGLADGSHSST 269
++ + V A S PL T L +F D SH ST
Sbjct: 215 KGKISSLVKDA-----SVPLIDVTNLPTPRKF-----LDTSHYST 249
>sp|Q9HE88|SEC8_NEUCR Probable exocyst complex component sec8 OS=Neurospora crassa
(strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257
/ FGSC 987) GN=sec-8 PE=3 SV=1
Length = 1111
Score = 84.7 bits (208), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 89/172 (51%)
Query: 43 TSKDREGEVQILKDQNDIIEEVVDEVVHAYHTGFNKAIQNYSQILRLFSESAESIKELKV 102
+S R E + + + ++E + +VH +H GFN +I + +I S + ++ LK
Sbjct: 115 SSVGRAHEYRNFQQTHQFLQESLKNIVHDHHQGFNSSIGTFHKIQGSIQSSQKKVRALKE 174
Query: 103 DLAEAKRRLGTRNKQLHQLWYRSVTLRHIISLLDQIEGIAKVPARIEKLIAGKQYYAAVQ 162
LA +K L T N +L QL S ++ L++++ + VP ++E I+ K++ AV+
Sbjct: 175 SLAASKTALCTTNPELKQLHATSRMYDGVLQTLNELDDLRTVPDQLEARISEKRFLTAVE 234
Query: 163 LHAQSALMLEREGLQTVGALQDVRSELTKLRGVLFYKVLEDLHAHLYNRGEY 214
+ + L + L +GAL D+RS L L ++E+LH HLY + Y
Sbjct: 235 VLQNALRKLRKPELDNIGALSDLRSYLANQETALMDILVEELHEHLYLKSPY 286
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 103/464 (22%), Positives = 182/464 (39%), Gaps = 49/464 (10%)
Query: 574 GTNVLQEGYGTAAVLPEQGIYLAASIYRPVLQFTDKVASMLPQKYSQLGNDGLLAFVENF 633
G+ Q+ GT L E ++ + + P L F ++ S++P S L L +F++NF
Sbjct: 569 GSGSSQQNSGTYKSLVEPSVFNMSLLLPPTLIFLQRLKSIVPPG-SDLATSTLTSFLDNF 627
Query: 634 VKDHLLPTMFVDYRKGVQQAISSPAAFRPRAHTAATYVPSIEKGRPVLQGLLAIDFLAKE 693
+ + P + K AF+ + A RPV +G A +
Sbjct: 628 LVNVFQPQLDETLGKLSDTVFGEADAFQQDSDWAQV------AKRPVYKGTTAFFTVITA 681
Query: 694 VLGWAQAMPKFAADLVKYVQTFLERTYERCRTSYMEAVLEKQSYMLIGRHDIDKL----- 748
+P A L + T + R Y+RC + Y V + Q + +KL
Sbjct: 682 FCRMLGTIPHDQA-LSTLIITQMVRYYDRCFSWYKALVTKTQEGGDKQIREKEKLRASAI 740
Query: 749 LRLEPASASLPNGQLDSVSSVNDAETPGVESELREL--FLSLRPIRQENLIHDENKLILL 806
L EP+ +L ++ND E + E+ +L + + R + ++I D + + +
Sbjct: 741 LATEPSEVRETIQRLWKSENLNDLEL--LYREVNQLIAWANGRDLDASDIIQDRDMIQSM 798
Query: 807 ASLSDSLEYVADSIERLGRATLRESNLVEES-------------RKPHHNRSSSAPS--- 850
L S+++++ I L T E++ + S P AP
Sbjct: 799 CLLYTSMKWLSVKIHGLRHITRNETDSSKSSFPTKAEKKRWTLLNDPSKATGGEAPVYLP 858
Query: 851 ------RDLASFADEYRKLAIDCLKVLRVEMQLETIFHLQE----MTSRDYLEDQDAEEP 900
+ S Y +LA L L +E++ + LQ +T+ YL DQ+ EP
Sbjct: 859 MTEETVENFDSILVSYDELASTALLTLHLEIRTRILHSLQTALSPLTTAPYLLDQEVNEP 918
Query: 901 DDFIISLTSQITRRDEEMAPFIAEEKRNYIFGGICGIAANASIKALADMKNINLFGVQQI 960
D I+SL S++ DE + + + ++ G+ + IK +N G ++
Sbjct: 919 DPEILSLNSEMVAYDEILVRCLRLREVQFVRNGLGKLINGFLIKNAPMTAPMNAKGCGRM 978
Query: 961 CRNSIALEQALAAIPSIDSEAVRRRLDRVRTYYELLNMPFEALL 1004
N + L+Q L I E V L R Y+E+ +A+L
Sbjct: 979 QLNILVLQQNLKNI----EEGV--DLVRASNYFEMFERGVDAIL 1016
>sp|Q9XWS2|EXOC4_CAEEL Exocyst complex component 4 OS=Caenorhabditis elegans GN=sec-8 PE=2
SV=2
Length = 893
Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 124/526 (23%), Positives = 214/526 (40%), Gaps = 104/526 (19%)
Query: 549 FRFTDATISIPNQGADLIRQGWSRRGTNVLQEGYGTAAVLPEQGIYLAASIYRPVLQFTD 608
FRF + + PN + + T AV+ + Y I+ P+L
Sbjct: 397 FRFENTACATPNANSS----------------SHRTKAVICKPSAYNIKVIF-PIL---- 435
Query: 609 KVASMLPQKYSQLGNDG---LLAFVENFVKDHLLPTMFVDYRKG-----VQQAISSPAAF 660
S L + + ND L F+ +FV + +FV+ KG ++ A+ A
Sbjct: 436 ---SRLMETTEKNINDSPCELRRFMHSFVME-----VFVERVKGELASRIEGALRGGEAV 487
Query: 661 RPRAHTAATYVPSIEK----GRPVLQGLLAIDFLAKEVLG-WAQAMPKFAADLVKYVQTF 715
R T +PS EK + V +++ID A W + + ++
Sbjct: 488 R--VSTNKKILPSCEKVLNLCKEVQDLIVSIDLYADRFAALWLLVLTDYFKNMTDVYDRM 545
Query: 716 LERTYERC--RTSYMEAVLEKQSYMLIGRHDIDKLLRLEPASASLPNGQLDSVSSVNDAE 773
+ + + + +K S DI +LL SLPN S+S +
Sbjct: 546 TPKNPDPSLPNSEALPTRRQKISAAWTADDDISRLL------MSLPNWHAASISPM---- 595
Query: 774 TPGVESEL---------RELFL------SLRPIRQENLIHDENKLILLASLSDSLEYVAD 818
TP VESEL E+ + + + + +LI D N + + ASL +SL + +D
Sbjct: 596 TPAVESELDVGERNKRESEILIGNLGTQAQNSLSESDLITDMNDIKMFASLHESLRWFSD 655
Query: 819 SIERLGRA------TLRESNLVEESRKPHHN-RSSSAPS------RDLASFADEYRKLAI 865
I L + + ++ +V+ K ++S PS R L S AD
Sbjct: 656 EIRELVHSLPANVKMMLDTCMVQVRLKDGQMIDNNSVPSAIEDCVRRLESIAD------- 708
Query: 866 DCLKVLRVEMQLETIFHLQEMTSRDYLEDQDAEEPDDFIISLTSQITRRDEEMAPFIAEE 925
CL +L +E+++ FHL + Y E D +++L + + + + ++
Sbjct: 709 SCLLLLHIEIRVHCFFHLAPLAK--YRNTSSHNEVDPEVVALGKDLHQFHDNLKDVLSPA 766
Query: 926 KRNYIFGGICGIAANASIKALADMKNINLFGVQQICRNSIALEQALAAIPSIDSEAVRRR 985
K +Y+F G+ + A+ I M + +++CRN ++Q L+ I + RR
Sbjct: 767 KLSYVFDGLGHLCASLFIHYSQFMPRLTEAAKKRVCRNVWGVQQRLSRITN------RRE 820
Query: 986 --LDRVRTYYELL--NMPFEALLAFVTEHENLFTTTEYASLLKVNV 1027
LDR R +++LL N P + +LA V E + FT TE LL ++V
Sbjct: 821 SDLDRARAFFDLLLDNTP-DGILAIVPEKRSQFTATELNYLLALSV 865
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/141 (21%), Positives = 65/141 (46%), Gaps = 1/141 (0%)
Query: 64 VVDEVVHAYHTGFNKAIQNYSQILRLFSESAESIKELKVDLAEAKRRLGTRNKQLHQLWY 123
++D +V + K + ++ + S E I ++ L K L R L +LW+
Sbjct: 66 LIDRLVKNHQQDVEKCLVSFRDVSSKISNCRERIHNVRNALHTVKSLLELRRDDLKKLWH 125
Query: 124 RSVTLRHIISLLDQIEGIAKVPARIEKLIAGKQYYAAVQLHAQSALMLEREGLQTVGALQ 183
+ + + ++ ++E + + P++IE LI+ +QY A +S ++ L V L
Sbjct: 126 ENAQQKSVCEIMAKLEELREAPSKIENLISKEQYQQAADTVTESRELINGR-LSRVEGLS 184
Query: 184 DVRSELTKLRGVLFYKVLEDL 204
+ +E+ + +L K+ + L
Sbjct: 185 HLSAEIERFTKILIDKINDTL 205
>sp|P32855|SEC8_YEAST Exocyst complex component SEC8 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=SEC8 PE=1 SV=1
Length = 1065
Score = 54.7 bits (130), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 95/206 (46%), Gaps = 11/206 (5%)
Query: 15 YLREELARIEVSWVAPRFDSLPHVVHILTSKD--------REGEVQILKDQNDIIEEVVD 66
+L+ +L RI + W D+ + L D R E LK Q I +
Sbjct: 34 HLQNDLNRINLQWNRILSDNTNPLELALAFLDDTSVGLGHRYEEFNQLKSQ---IGSHLQ 90
Query: 67 EVVHAYHTGFNKAIQNYSQILRLFSESAESIKELKVDLAEAKRRLGTRNKQLHQLWYRSV 126
+VV+ + FN + +Y + + ++ E LK L EA ++ T L +L ++
Sbjct: 91 DVVNEHSQVFNTNVASYGKAVSSIMQAQEQTLNLKNCLKEANEKITTDKGSLQELNDNNL 150
Query: 127 TLRHIISLLDQIEGIAKVPARIEKLIAGKQYYAAVQLHAQSALMLEREGLQTVGALQDVR 186
+I +L IE + ++P +IE+ I + ++ L + +++ + L+TV L+ +
Sbjct: 151 KYTKMIDVLVNIEELLQIPEKIEENIRKENFHQVQILLERGFILMNNKSLKTVEILKPIN 210
Query: 187 SELTKLRGVLFYKVLEDLHAHLYNRG 212
+L +LF ++E++H +Y++
Sbjct: 211 QQLELQEHLLFNNLIEEIHDIMYSKS 236
>sp|O74562|SEC8_SCHPO Exocyst complex component sec8 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=sec8 PE=1 SV=2
Length = 1073
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 58/135 (42%), Gaps = 1/135 (0%)
Query: 59 DIIEEVVDEVVHAYHTGFNKAIQNYSQILRLFSESAESIKELKVDLAEAKRRLGTRN-KQ 117
D I + + H + F + I Y +I+ + I LK L ++ +G N K+
Sbjct: 98 DRISAALQTIAHTHKDDFTRGISAYGEIMEGIQKCNSRIIALKQSLEASQECIGNTNSKE 157
Query: 118 LHQLWYRSVTLRHIISLLDQIEGIAKVPARIEKLIAGKQYYAAVQLHAQSALMLEREGLQ 177
L Q RS + +IS+L ++ ++ L+ KQYY A L + L R
Sbjct: 158 LQQTLARSSQYKKVISVLKELNEANQLFDNFHTLVDSKQYYHASDLIRRVWDELSRSDFD 217
Query: 178 TVGALQDVRSELTKL 192
+ ++ +S +T L
Sbjct: 218 GILVVEQFKSRMTGL 232
Score = 41.6 bits (96), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 67/138 (48%), Gaps = 2/138 (1%)
Query: 858 DEYRKLAIDCLKVLRVEMQLETIFHL-QEMTSRDYLEDQDAEEPDDFIISLTSQITRRDE 916
D ++L D L ++R+E++L+ I + Q + DY+ + PD I++L S I +
Sbjct: 866 DSLQRLQFDALLLIRMEVRLQYIHSINQSVNLPDYVVEYRGR-PDASIMALNSTIVTTNL 924
Query: 917 EMAPFIAEEKRNYIFGGICGIAANASIKALADMKNINLFGVQQICRNSIALEQALAAIPS 976
++ + E +R ++F G+ + ++ ++++N Q+ +N A+ Q L +
Sbjct: 925 KLETCLNEWERRFVFQGLSELVDSSLYSIFYKIESMNRGSCLQMLKNMSAMIQILKTVKE 984
Query: 977 IDSEAVRRRLDRVRTYYE 994
I + + RV Y+
Sbjct: 985 IHGDVEFPKSSRVFGIYQ 1002
>sp|P82094|TMF1_HUMAN TATA element modulatory factor OS=Homo sapiens GN=TMF1 PE=1 SV=2
Length = 1093
Score = 38.1 bits (87), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 4/74 (5%)
Query: 54 LKDQNDIIEEVVDEVVHAYHTGFNKAIQNYSQILRLFSESAESIKELKVDLAEAKRRLGT 113
L +QND +EE V E+ T Q Y+ IL+++ E AE +EL++DL + K T
Sbjct: 1024 LTNQNDELEEKVKEIPK-LRTQLRDLDQRYNTILQMYGEKAEEAEELRLDLEDVKNMYKT 1082
Query: 114 RNKQLHQLWYRSVT 127
Q+ +L +S++
Sbjct: 1083 ---QIDELLRQSLS 1093
>sp|B9EKI3|TMF1_MOUSE TATA element modulatory factor OS=Mus musculus GN=Tmf1 PE=1 SV=2
Length = 1091
Score = 35.4 bits (80), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 54 LKDQNDIIEEVVDEVVHAYHTGFNKAIQNYSQILRLFSESAESIKELKVDLAEAKRRLGT 113
L +QND +EE V E+ Q Y+ IL+++ E AE +EL++DL + K T
Sbjct: 1022 LTNQNDELEEKVKEIPK-LRVQLRDLDQRYNTILQMYGEKAEEAEELRLDLEDVKNMYKT 1080
Query: 114 R 114
+
Sbjct: 1081 Q 1081
>sp|Q8CCB4|VPS53_MOUSE Vacuolar protein sorting-associated protein 53 homolog OS=Mus
musculus GN=Vps53 PE=2 SV=1
Length = 832
Score = 35.4 bits (80), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 49/114 (42%), Gaps = 16/114 (14%)
Query: 927 RNYIFGGICGIAANASIKA----LADMKNINLFGVQQICRNSIALEQALAAIPSIDSEAV 982
R Y F C AN+ I L K I++ G +Q+ ++ +L+ L +PSI S+ V
Sbjct: 660 RKY-FTQFCIKFANSFIPKFITHLFKCKPISMVGAEQLLLDTHSLKMVLLDLPSIGSQVV 718
Query: 983 RRR-----------LDRVRTYYELLNMPFEALLAFVTEHENLFTTTEYASLLKV 1025
R+ + R +++ P E L+ FV + L T + K+
Sbjct: 719 RKAPASYTKIVVKGMTRAEMILKVVMAPHEPLVVFVDNYIKLLTDCNSETFQKI 772
>sp|Q96DT5|DYH11_HUMAN Dynein heavy chain 11, axonemal OS=Homo sapiens GN=DNAH11 PE=1 SV=3
Length = 4523
Score = 35.0 bits (79), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 687 IDFLAKEVLGWAQAMPKFAADLVKYVQTFLERTYERCRTSY-MEAVLEK-QSYMLIGRHD 744
+D K++L WA + +F D +QT L T E R Y ME +LEK + ML+G
Sbjct: 2461 VDHKTKKLLPWADKIAQFTMDPDVPLQTVLVHTTETARLRYFMELLLEKGKPLMLVGNAG 2520
Query: 745 IDKLLRLEPASASL 758
+ K + + ASL
Sbjct: 2521 VGKTVFVGDTLASL 2534
>sp|Q2SFI6|GCSP_HAHCH Glycine dehydrogenase [decarboxylating] OS=Hahella chejuensis
(strain KCTC 2396) GN=gcvP PE=3 SV=1
Length = 960
Score = 35.0 bits (79), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 60/155 (38%), Gaps = 5/155 (3%)
Query: 38 VVHILTSKDREGEVQILKD--QNDIIEEVVDEVVHAYHTGFNKAIQNYSQI--LRLFSES 93
++H+ S +V L ++ I E+ + HT FN+ + LR S+
Sbjct: 440 LLHVFASGKPVADVATLDSSAKDAIPAELRRQSAFMTHTVFNRYHSETEMLRYLRRLSDK 499
Query: 94 AESIKELKVDLAEAKRRLGTRNKQLHQLWYRSVTLRHIISLLDQIEGIAKVPARIEKLIA 153
++ + L +L + W + H + LDQ EG + A +E++++
Sbjct: 500 DLALDRTMIPLGSCTMKLNATTEMTPVSWDGFCAI-HPFAPLDQTEGYRALIADLERMLS 558
Query: 154 GKQYYAAVQLHAQSALMLEREGLQTVGALQDVRSE 188
YAA L + E GL + A R E
Sbjct: 559 AATGYAAFSLQPNAGSQGEYAGLLAIRAYHHSRGE 593
>sp|Q6W8W5|POL1_ARMVN RNA1 polyprotein OS=Arabis mosaic virus (isolate NW) PE=3 SV=1
Length = 2284
Score = 34.7 bits (78), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 81/201 (40%), Gaps = 7/201 (3%)
Query: 207 HLYNRGEYSSAVLSMHEMDDEVPTTVAVAYTTNNSQPLSRRTRLKGDNQFGVHGLADGSH 266
+L+ EYS +V + +++P TT + +L G++ + GL + SH
Sbjct: 1940 YLHQDREYSESVRDFYL--EKLPPGSYKELTTWYEAQIFHECQLSGESGWKPQGLIEVSH 1997
Query: 267 SSTFDGHDEDGSLEAHDETSLDGLSIGWLANSTPDEFVEAIRKSDAPLHVKYLQTMVECL 326
++F + E GL+I +E + S P + ++ ++C
Sbjct: 1998 GASFASFVQQNGTELERHDICPGLAISGSKYIAREEEILMSLSSLLPGDINAVKLTLKCG 2057
Query: 327 CILGKVAAAGAIICQRLRPTIHEIITSKIKAHAQL-INSSRSAIGQAAQTGTTGLHF--- 382
+G++ + +++ QR + ++ IK L I R IG A G F
Sbjct: 2058 DGIGRLPSKASVLSQRKPGIVMQLCARAIKEKKTLVIRDERPYIGGWAMACICGESFGFS 2117
Query: 383 MKGQLRSY-QLPKQKRQNGIS 402
+K L Y L R+NG++
Sbjct: 2118 IKDTLALYANLMGPNRKNGLA 2138
>sp|Q92570|NR4A3_HUMAN Nuclear receptor subfamily 4 group A member 3 OS=Homo sapiens
GN=NR4A3 PE=2 SV=3
Length = 626
Score = 33.9 bits (76), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 56/120 (46%), Gaps = 15/120 (12%)
Query: 85 QILRLFSESAESIKELKVDLAEAKRRLGTRNKQLHQLWYRSVTLRHIISLLDQIEGIAKV 144
Q LR F E +SIK+ ++L Q L +++ +S++ + G+ K
Sbjct: 505 QCLRGFGEWLDSIKDFSLNL------------QSLNLDIQALACLSALSMITERHGL-KE 551
Query: 145 PARIEKLIAGKQYYAAVQLHAQSALMLEREGLQTVGALQDVRSELTKLRGVLFYKVLEDL 204
P R+E+L + ++++ H LE + +GAL ++R T +FY LEDL
Sbjct: 552 PKRVEELC--NKITSSLKDHQSKGQALEPTESKVLGALVELRKICTLGLQRIFYLKLEDL 609
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.132 0.371
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 362,330,448
Number of Sequences: 539616
Number of extensions: 14975772
Number of successful extensions: 44019
Number of sequences better than 100.0: 46
Number of HSP's better than 100.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 36
Number of HSP's that attempted gapping in prelim test: 43950
Number of HSP's gapped (non-prelim): 87
length of query: 1046
length of database: 191,569,459
effective HSP length: 128
effective length of query: 918
effective length of database: 122,498,611
effective search space: 112453724898
effective search space used: 112453724898
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 67 (30.4 bits)