Query 001602
Match_columns 1046
No_of_seqs 151 out of 211
Neff 7.0
Searched_HMMs 29240
Date Tue Mar 26 16:17:20 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/001602.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_901-904//hhsearch_pdb/001602hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3n1e_A Vacuolar protein sortin 1.0 1 1 36.0 11.6 123 849-978 6-130 (141)
2 2d2s_A Exocyst complex compone 1.0 1 1 34.5 8.2 71 136-206 13-87 (235)
3 2fji_1 Exocyst complex compone 1.0 1 1 29.4 13.5 329 625-1025 8-350 (399)
4 2a2f_X Exocyst complex compone 1.0 1 1 29.4 9.6 89 885-974 202-292 (325)
5 3fhn_A Protein transport prote 1.0 1 1 26.8 12.5 156 851-1020 502-671 (706)
6 3hr0_A COG4; conserved oligome 1.0 1 1 24.3 11.3 168 851-1026 69-250 (263)
7 3k8p_C DSL1, KLLA0C02695P; int 1.0 1 1 16.1 8.4 13 593-605 218-230 (357)
8 3oa7_A Head morphogenesis prot 1.0 1 1 14.6 11.7 128 58-213 32-163 (206)
9 4akg_A Glutathione S-transfera 1.0 1 1 13.4 9.1 29 7-35 214-242 (2695)
10 2vgl_A Adaptor protein complex 1.0 1 1 13.4 -2.7 32 987-1018 578-609 (621)
No 1
>3n1e_A Vacuolar protein sorting-associated protein 54; spinal muscular atrophy, vesicle trafficking, golgi apparatu tethering complex, GARP.; 1.70A {Mus musculus} PDB: 3n1b_A
Probab=1.00 E-value=1 Score=36.01 Aligned_cols=123 Identities=19% Similarity=0.175 Sum_probs=96.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHH
Q ss_conf 13569999999999999999999999878787500112589877889999978389999979999987740177323242
Q 001602 849 PSRDLASFADEYRKLAIDCLKVLRVEMQLETIFHLQEMTSRDYLEDQDAEEPDDFIISLTSQITRRDEEMAPFIAEEKRN 928 (1046)
Q Consensus 849 ~~~~f~~i~~~f~~La~~~Ll~LrlEiR~~~iy~L~~l~~~~y~~~~~~~EpDp~I~~Ln~eL~~~de~ls~~L~~~e~~ 928 (1046)
+...||.+.+.|++=...+.-=|--=+.-+..-++. +|- ..+.-|.|+.-.|.+++..+++.++..||+...+
T Consensus 6 lL~efDkv~rdy~eH~~eI~~KLv~Im~~r~~~~l~-----~Wd--~k~pvpS~~m~tl~Ke~~kLH~~Ls~~LP~~~v~ 78 (141)
T 3n1e_A 6 MLRHFDHITKDYHDHIAEISAKLVAIMDSLFDKLLS-----KYE--VKAPVPSPCFRNICKQMTKMHEAIFDLLPEEQTQ 78 (141)
T ss_dssp HHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHT-----TCC--CCSSSSCHHHHHHHHHHHHHHHHHTTTSCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHC--CCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHH
T ss_conf 999898999999999999999999999989999998-----725--5899899899999999999999988329999999
Q ss_pred HHHCCHHHHHHHHHHHHCHHHHHHCHHHHHH--HHHHHHHHHHHHHCCCCCC
Q ss_conf 3524489999999997040123420976999--9974999999831078999
Q 001602 929 YIFGGICGIAANASIKALADMKNINLFGVQQ--ICRNSIALEQALAAIPSID 978 (1046)
Q Consensus 929 fIF~GL~~li~~~lI~~~~~i~~iN~~GvkK--m~rNI~~LQQ~L~nI~~~~ 978 (1046)
.||.-+=.-...-|-.....+..-|..|-++ |.+.+.-.+++|++|-+-.
T Consensus 79 ~Im~~Vf~~fk~~l~~~~~~~~i~~~~G~q~g~v~~Dv~ff~~~L~~L~g~~ 130 (141)
T 3n1e_A 79 MLFLRINASYKLHLKKQLSHLNVINDGGPQNGLVTADVAFYTGNLQALKGLK 130 (141)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCSSSSHHHHHHHHHHHHHHHHHHTSTTCT
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC
T ss_conf 9999999999999999999868878776300278999999999862468998
No 2
>2d2s_A Exocyst complex component EXO84; tethering complex, EXO84P, endocytosis/exocytosis complex; 2.85A {Saccharomyces cerevisiae} SCOP: a.118.17.2
Probab=1.00 E-value=1 Score=34.51 Aligned_cols=71 Identities=13% Similarity=0.110 Sum_probs=58.3
Q ss_pred HHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCC----CCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 98997540289999999416799999999999998613398----876660889999999797999999999987
Q 001602 136 DQIEGIAKVPARIEKLIAGKQYYAAVQLHAQSALMLEREGL----QTVGALQDVRSELTKLRGVLFYKVLEDLHA 206 (1046)
Q Consensus 136 ~~Ie~l~~vP~~ie~~i~~k~y~~A~~lL~~~~~~l~~~~L----~~i~aL~~lr~~l~~q~~~L~d~lieEL~~ 206 (1046)
+.+..+...||.++-+|++++|-+|++++.+.-..+.+-.- .+..++..++..+..++..|.+.|++||..
T Consensus 13 ~~~~wl~~~~deLDv~IA~r~feeAv~lle~~~~~l~~~~~~~~~~~~~~~~~l~~ki~eR~~~L~~~L~~~l~~ 87 (235)
T 2d2s_A 13 QRLKFLDEGVEEIDIELARLRFESAVETLLDIESQLEDLSERISDEELMLLNLISLKIEQRREAISSKLSQSILS 87 (235)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTC-------CHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 047888716298899999976999999999999998728444565536789999999999999999999999870
No 3
>2fji_1 Exocyst complex component SEC6; exocytosis, tandem helical bundles, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=1.00 E-value=1 Score=29.42 Aligned_cols=329 Identities=13% Similarity=0.084 Sum_probs=167.7
Q ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC-CCCCCC-CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCH
Q ss_conf 06799999977500010657999999988239-876543-4455565444323698610049999999999999984017
Q 001602 625 GLLAFVENFVKDHLLPTMFVDYRKGVQQAISS-PAAFRP-RAHTAATYVPSIEKGRPVLQGLLAIDFLAKEVLGWAQAMP 702 (1046)
Q Consensus 625 ~l~~Fld~Fv~~vFLPql~~~v~~~~~~~~~~-~daf~~-~~~~~~~~~~~~~~~rPI~k~~~~~~~~i~~l~~ml~t~p 702 (1046)
.....+++|+.. +..++.+-++.++.. ...|.. ...+. .-..+.....+++.+++++.+-.....++-
T Consensus 8 ~~~~L~~~Y~~~-----i~~~~~eW~~nil~~E~~~w~~r~~~P~-----~d~~g~~~t~~~~dvfqml~eql~~a~~~~ 77 (399)
T 2fji_1 8 EKETLFKDYLNL-----IVVKMTEWIGNLEKAEFDVFLERSTPPH-----SDSDGLLFLDGTKTCFQMFTQQVEVAAGTN 77 (399)
T ss_dssp HHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHCCSCCE-----ECTTSCEECHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHCCCCCC-----CCCCCCEECCCHHHHHHHHHHHHHHHHHCC
T ss_conf 599999999999-----9999999999999999999884689998-----699988528864799999999999998479
Q ss_pred H--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 8--89999999999999999999999999772221211006630437740293555578898677776688785245458
Q 001602 703 K--FAADLVKYVQTFLERTYERCRTSYMEAVLEKQSYMLIGRHDIDKLLRLEPASASLPNGQLDSVSSVNDAETPGVESE 780 (1046)
Q Consensus 703 ~--y~~~~~~li~~~L~~yye~c~~~y~~lv~~~~s~~~~~~~d~~~ll~~~~~~~~l~~~~~~~~~~~~~~~l~e~E~~ 780 (1046)
. .-..+...++..|..|...|...+.+-...-.+. + + ..++ .|. .+. ++ ..... .. .|.
T Consensus 78 ~~~l~~~v~~~~~~~L~~f~~~~~~~l~~~~~~~~~~---~-~---~~~~-~~~--~~~-~~----~~~~~-~~--~e~- 138 (399)
T 2fji_1 78 QAKILVGVVERFSDLLTKRQKNWISKISEEIKKQINY---N-H---KYDI-DPE--SIT-PE----DECPG-GL--VEY- 138 (399)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---H-H---TTTT-GGG--SCC-TT----TCCCS-CH--HHH-
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC---C-C---CCCC-CCC--CCC-CC----CCCCC-CH--HHH-
T ss_conf 7300999999999999999999999999999987520---1-0---0012-422--247-65----45654-18--786-
Q ss_pred HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 89875216777777566775799999979998988999999640110257864445788899999980135699999999
Q 001602 781 LRELFLSLRPIRQENLIHDENKLILLASLSDSLEYVADSIERLGRATLRESNLVEESRKPHHNRSSSAPSRDLASFADEY 860 (1046)
Q Consensus 781 l~~~~~~~~~i~~~dli~d~~~l~~La~L~~SL~Wl~~~i~~L~~~~~~~~~~~~~~~~~~~~r~s~~~~~~f~~i~~~f 860 (1046)
+.+++ .+ ..=+...+.+|.+......... ........|+.+...|
T Consensus 139 ----------------------liA~~--Nn-~~~~~e~~~~l~~~~~~~~~~~----------~~~~~~~~l~~~~~~f 183 (399)
T 2fji_1 139 ----------------------LIAVS--ND-QMKAADYAVAISSKYGKLVSKV----------YEKQITNHLEGTLDGF 183 (399)
T ss_dssp ----------------------HHHHH--HH-HHHHHHHHHHHHHHHHTTSCHH----------HHHHHHHHHHTTHHHH
T ss_pred ----------------------HHHHH--CC-HHHHHHHHHHHHHHHHHHCCHH----------HHHHHHHHHHHHHHHH
T ss_conf ----------------------56655--44-8889999999999999862677----------8888899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHH
Q ss_conf 99999999999999878787500112589877889999978389999979999987740177323242352448999999
Q 001602 861 RKLAIDCLKVLRVEMQLETIFHLQEMTSRDYLEDQDAEEPDDFIISLTSQITRRDEEMAPFIAEEKRNYIFGGICGIAAN 940 (1046)
Q Consensus 861 ~~La~~~Ll~LrlEiR~~~iy~L~~l~~~~y~~~~~~~EpDp~I~~Ln~eL~~~de~ls~~L~~~e~~fIF~GL~~li~~ 940 (1046)
.+++..|+..|-=.+=..+=-++..++...|..+. .+-.+...+..+-.-+..+|.+.-++.+..-+-..+-.
T Consensus 184 ~~l~~~~~~~L~~~if~dl~p~~~~lft~~W~~~~-------~v~~i~~ti~dy~~d~~~~L~~~~~~~l~~~~~~~~v~ 256 (399)
T 2fji_1 184 AEVAQCSSLGLITLMFDDLRKPYQEIFSKTWYMGS-------QAQQIADTLDEYLLDIKPQMNSVLFVNFIDNVIGETII 256 (399)
T ss_dssp HHHHHHHHHHHHHHHHHTTHHHHTTTTSGGGTTCC-------HHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCC-------HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999889999985770300876-------79999999999999999980869999999999999999
Q ss_pred HHHHHCHHHHHHC---HHHHHHHHHHHHHHHHHHHCCCCCCHH---HHHHHHHHHHHHHHHCCCCH-HHHHHHH---HHC
Q ss_conf 9997040123420---976999997499999983107899937---99976889999998407999-9999999---837
Q 001602 941 ASIKALADMKNIN---LFGVQQICRNSIALEQALAAIPSIDSE---AVRRRLDRVRTYYELLNMPF-EALLAFV---TEH 1010 (1046)
Q Consensus 941 ~lI~~~~~i~~iN---~~GvkKm~rNI~~LQQ~L~nI~~~~~~---~v~~~l~ra~~yyeL~~~~~-~~ll~~i---~e~ 1010 (1046)
-++.....=.+++ ..|..||.+++-+|.+-+..+...... -+...+.+....=+ +..++ +.+...+ ...
T Consensus 257 ~Yl~~l~~~~~~~~~~~~~~~~l~~D~~~l~~~f~~~~~~~~~~~~~v~~~~~~l~~l~~-L~~d~~~~i~~~~~~l~~~ 335 (399)
T 2fji_1 257 KFLTALSFEHSFKNKNNKFLEAMKRDFEIFYQLFVKVLDGNESKDTLITQNFTVMEFFMD-LSCEPIDSILDIWQKYLEV 335 (399)
T ss_dssp HHHHGGGGCCCCCCGGGHHHHHHHHHHHHHHHHHHHHTTTCTTHHHHHHHHHHHHHHHHH-HHHSCGGGHHHHHHHHHTT
T ss_pred HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH-HCCCCHHHHHHHHHHHHHH
T ss_conf 999998467777840599999999999999999998556532025778779999999997-3689577799999999986
Q ss_pred CCCCCHHHHHHHHHC
Q ss_conf 999999999997620
Q 001602 1011 ENLFTTTEYASLLKV 1025 (1046)
Q Consensus 1011 ~~~Fs~~Ey~~ll~L 1025 (1046)
=+..+.+..+++|.+
T Consensus 336 ypD~~~~~V~aiL~~ 350 (399)
T 2fji_1 336 YWDSRIDLLVGILKC 350 (399)
T ss_dssp CTTCCSHHHHHHHTT
T ss_pred CCCCCHHHHHHHHHH
T ss_conf 899999999999982
No 4
>2a2f_X Exocyst complex component SEC15; all helical structure, protein transport; 2.50A {Drosophila melanogaster}
Probab=1.00 E-value=1 Score=29.39 Aligned_cols=89 Identities=18% Similarity=0.105 Sum_probs=68.2
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHH-HHCCHHHHHHHHHHHHC-HHHHHHCHHHHHHHHH
Q ss_conf 125898778899999783899999799999877401773232423-52448999999999704-0123420976999997
Q 001602 885 EMTSRDYLEDQDAEEPDDFIISLTSQITRRDEEMAPFIAEEKRNY-IFGGICGIAANASIKAL-ADMKNINLFGVQQICR 962 (1046)
Q Consensus 885 ~l~~~~y~~~~~~~EpDp~I~~Ln~eL~~~de~ls~~L~~~e~~f-IF~GL~~li~~~lI~~~-~~i~~iN~~GvkKm~r 962 (1046)
.+..-+|.+...+++|+.+|.+|..-|..+=.. -..||+.-+.. +|.-+.|+.+.++=--. ..+++||.+|++.+-.
T Consensus 202 ~la~yDW~~~~~~~~ps~yi~dli~fL~~~f~s-l~~LP~~v~~~~~~~a~~his~~l~~~Ll~~~vk~in~~av~~~~~ 280 (325)
T 2a2f_X 202 ELSAYDWLLVEPPGIASAFITDMISYLKSTFDS-FAFKLPHIAQAACRRTFEHIAEKIYSIMYDEDVKQISTGALTQINL 280 (325)
T ss_dssp TTCCTTCC----CCSCCHHHHHHHHHHHHHHHT-TTTTSHHHHHHHHHHHHHHHHHHHHHHHTC------CCTTHHHHHH
T ss_pred HHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH-HHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHH
T ss_conf 760368878889998568999999999999999-8739999999999999999999999986486114329999998999
Q ss_pred HHHHHHHHHHCC
Q ss_conf 499999983107
Q 001602 963 NSIALEQALAAI 974 (1046)
Q Consensus 963 NI~~LQQ~L~nI 974 (1046)
+|-.|.+-.++-
T Consensus 281 Dv~~lE~fa~~~ 292 (325)
T 2a2f_X 281 DLMQCEFFAASE 292 (325)
T ss_dssp HHHHHHHHHTTC
T ss_pred HHHHHHHHHHHC
T ss_conf 999999998727
No 5
>3fhn_A Protein transport protein TIP20; TIP20P, vesicle tethering, endoplasmic reticulum, ER-golgi transport, membrane, phosphoprotein; 3.00A {Saccharomyces cerevisiae}
Probab=1.00 E-value=1 Score=26.78 Aligned_cols=156 Identities=11% Similarity=0.182 Sum_probs=104.2
Q ss_pred HHHHHHHHHHHHHHHH-HHH----HHHHHHHHHHHHHCCCCCCCCCCCCC--------CCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 5699999999999999-999----99999878787500112589877889--------9999783899999799999877
Q 001602 851 RDLASFADEYRKLAID-CLK----VLRVEMQLETIFHLQEMTSRDYLEDQ--------DAEEPDDFIISLTSQITRRDEE 917 (1046)
Q Consensus 851 ~~f~~i~~~f~~La~~-~Ll----~LrlEiR~~~iy~L~~l~~~~y~~~~--------~~~EpDp~I~~Ln~eL~~~de~ 917 (1046)
.-||..+..|+.|..+ .+- .+.-|++-.+=-|.. ...|.... ....|.+.++..-+-|...=..
T Consensus 502 SIFDetIs~Y~~L~~~~~~~~Iv~~v~~eik~~lK~Y~k---~s~W~s~~~~~~~~~~~~lspSaEL~~~L~~L~~~L~~ 578 (706)
T 3fhn_A 502 SLFQNVENDYEKAMSTDMQNSIVHRIQKLLKETLRNYFK---ISTWSTLEMSVDENIGPSSVPSAELVNSINVLRRLINK 578 (706)
T ss_dssp CTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTHHHHH---CCGGGTCCCC------CCCCCCGGGHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 608999999999998889999999999999999987748---16685667877666555688988899999999999999
Q ss_pred HCCC-CCHHHHHHHHCCHHHHHHHHHHHHCHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHC
Q ss_conf 4017-732324235244899999999970401234209769999974999999831078999379997688999999840
Q 001602 918 MAPF-IAEEKRNYIFGGICGIAANASIKALADMKNINLFGVQQICRNSIALEQALAAIPSIDSEAVRRRLDRVRTYYELL 996 (1046)
Q Consensus 918 ls~~-L~~~e~~fIF~GL~~li~~~lI~~~~~i~~iN~~GvkKm~rNI~~LQQ~L~nI~~~~~~~v~~~l~ra~~yyeL~ 996 (1046)
|... |+..-..-|+..+..-++..|..+.-.-.+.|.+|+.+++..+-+|-..+. +....+ +..|.+.+..--|+
T Consensus 579 L~~~lL~~~~f~~IwR~ia~~Ld~yL~e~IL~~nkFS~~Ga~Qf~~D~~~L~~v~~-lp~~~~---~~~~~~L~E~l~LL 654 (706)
T 3fhn_A 579 LDSMDIPLAISLKVKNELLNVIVNYFTESILKLNKFNQNGLNQFLHDFKSLSSILS-LPSHAT---NYKCMSLHELVKIL 654 (706)
T ss_dssp HHTSCCCHHHHHHHHHHHHHHHHHHHHHTTTTTSCBCHHHHHHHHHHHHHHHTTSC-CCTTCC---CHHHHHHHHHHHHH
T ss_pred HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHC-CCCCCH---HHHHHHHHHHHHHC
T ss_conf 99813777899999999999999999999986086488889999999999999856-888414---56779999999981
Q ss_pred CCCHHHHHHHHHHCCCCCCHHHHH
Q ss_conf 799999999998379999999999
Q 001602 997 NMPFEALLAFVTEHENLFTTTEYA 1020 (1046)
Q Consensus 997 ~~~~~~ll~~i~e~~~~Fs~~Ey~ 1020 (1046)
.++.+ .+...|+..+|.
T Consensus 655 ~L~~d-------~~~~~f~~~~y~ 671 (706)
T 3fhn_A 655 KLKYD-------PNNQQFLNPEYI 671 (706)
T ss_dssp GGGGC-------GGGTTTTSHHHH
T ss_pred CCCCC-------CCHHHHHHHHHH
T ss_conf 79887-------422067789887
No 6
>3hr0_A COG4; conserved oligomeric golgi complex, intracellular trafficking, vesicle tethering, multisubunit tethering complex, exocyst; 1.90A {Homo sapiens}
Probab=1.00 E-value=1 Score=24.25 Aligned_cols=168 Identities=17% Similarity=0.245 Sum_probs=105.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH-H--HHHHHHHHCCCCCCCCCCCCC------CCCCCCHHHHHHHHHHHHHHHHHCCC
Q ss_conf 56999999999999999999999-9--878787500112589877889------99997838999997999998774017
Q 001602 851 RDLASFADEYRKLAIDCLKVLRV-E--MQLETIFHLQEMTSRDYLEDQ------DAEEPDDFIISLTSQITRRDEEMAPF 921 (1046)
Q Consensus 851 ~~f~~i~~~f~~La~~~Ll~Lrl-E--iR~~~iy~L~~l~~~~y~~~~------~~~EpDp~I~~Ln~eL~~~de~ls~~ 921 (1046)
..|.+....|++|-...+-.|.- = -|++.+ |..+...+|.++. +.. ||++..+...+...=.-+...
T Consensus 69 ~~l~~~~~k~~~ll~~gi~~Lf~~~ikprLr~~--l~~f~~~~y~l~eee~~~~e~~--d~~~~~F~~~w~~ll~p~k~~ 144 (263)
T 3hr0_A 69 SDLAAVSNKFRDLLQEGLTELNSTAIKPQVQPW--INSFFSVSHNIEEEEFNDYEAN--DPWVQQFILNLEQQMAEFKAS 144 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHH--HHGGGGSCBSCCHHHHHHHHHS--CCSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHCCCCCCCHHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999999999999769889999--9987253356777677551016--689999999999999999987
Q ss_pred CCHHHHHHHHCCHHHHHHHHHHHHCHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCC-CH
Q ss_conf 73232423524489999999997040123420976999997499999983107899937999768899999984079-99
Q 001602 922 IAEEKRNYIFGGICGIAANASIKALADMKNINLFGVQQICRNSIALEQALAAIPSIDSEAVRRRLDRVRTYYELLNM-PF 1000 (1046)
Q Consensus 922 L~~~e~~fIF~GL~~li~~~lI~~~~~i~~iN~~GvkKm~rNI~~LQQ~L~nI~~~~~~~v~~~l~ra~~yyeL~~~-~~ 1000 (1046)
|.+.-..-+...+...+.+.+=..... +++|..|.-|+=|.+..|.-.+++++... +...|.|..+--.++.+ .+
T Consensus 145 Lt~~~y~~Ll~~~~~~la~~lE~~i~~-~~fn~lGal~LdrDvr~li~~~~~~~~~~---lRekF~RL~QI~~lLnle~~ 220 (263)
T 3hr0_A 145 LSPVIYDSLTGLMTSLVAVELEKVVLK-STFNRLGGLQFDKELRSLIAYLTTVTTWT---IRDKFARLSQMATILNLERV 220 (263)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHTT-CCBCHHHHHHHHHHHHHHHHHHHTTSCTT---HHHHTHHHHHHHHHHTCSSG
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCCHHHHHHHHHHHHHHHHHHHCCCHH---HHHHHHHHHHHHHHHCCCCH
T ss_conf 185799999999999999999999982-77070558999999999999997046611---66899999999999847976
Q ss_pred HHHHHHHHHC----CCCCCHHHHHHHHHCC
Q ss_conf 9999999837----9999999999976201
Q 001602 1001 EALLAFVTEH----ENLFTTTEYASLLKVN 1026 (1046)
Q Consensus 1001 ~~ll~~i~e~----~~~Fs~~Ey~~ll~L~ 1026 (1046)
+++.+...+. .-..|.+|.+.++.|=
T Consensus 221 eev~d~~~~~~~~~~W~Ls~~E~r~il~lR 250 (263)
T 3hr0_A 221 TEILDYWGPNSGPLTWRLTPAEVRQVLALR 250 (263)
T ss_dssp GGGGGTSGGGGTTCCCCSCHHHHHHHHTTB
T ss_pred HHHHHHHCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 899987334678853347999999999856
No 7
>3k8p_C DSL1, KLLA0C02695P; intracellular trafficking, DSL1 complex, multisubunit tethering complex, snare proteins; 2.60A {Kluyveromyces lactis}
Probab=1.00 E-value=1 Score=16.11 Aligned_cols=13 Identities=15% Similarity=0.299 Sum_probs=5.8
Q ss_pred CCHHHHHHHHHHH
Q ss_conf 3114553376999
Q 001602 593 IYLAASIYRPVLQ 605 (1046)
Q Consensus 593 ifn~~~Il~P~L~ 605 (1046)
+|.-.-|++|+..
T Consensus 218 P~i~~~i~~pl~k 230 (357)
T 3k8p_C 218 PYLKKTALPTLYK 230 (357)
T ss_dssp HHHHHTHHHHHHT
T ss_pred HHHHHHHHHHHHC
T ss_conf 8899975657644
No 8
>3oa7_A Head morphogenesis protein, chaotic nuclear migra protein 67 fusion protein; coiled coils, structural protein, spindle POLE BODY; 2.30A {Bacillus phage PHI29}
Probab=1.00 E-value=1 Score=14.63 Aligned_cols=128 Identities=11% Similarity=0.142 Sum_probs=78.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC--CHHHHHHH--HHHHHHHHHHH
Q ss_conf 999999999999975877999856069999979999999999999999999871259--36889999--99668999999
Q 001602 58 NDIIEEVVDEVVHAYHTGFNKAIQNYSQILRLFSESAESIKELKVDLAEAKRRLGTR--NKQLHQLW--YRSVTLRHIIS 133 (1046)
Q Consensus 58 ~~~~~~~L~~~V~~h~~~Fn~sI~sy~~i~~~i~~sq~~i~~ik~~L~~~k~~L~~~--~~~L~~L~--~~s~~~~~~i~ 133 (1046)
.+.+...+..+|.++ ++..+ ++...+....++|++|..-++....+ =+.+++.. .....|.. =
T Consensus 32 ~~~~~a~~~s~~s~~-~dl~~----------s~~~l~ae~~~L~~~l~kLeGn~se~ITfe~~~ks~p~i~ke~Y~~--L 98 (206)
T 3oa7_A 32 LQQLRVNYGSFVSEY-NDLTK----------SHNTLSKELDNLRSRFGNLEGNTSERITIKNILQSRPDISAEECNF--L 98 (206)
T ss_dssp HHHHHHHHHHHHHHH-HHHHH----------HHHHHHHHHHHHHHHHHHHHCCGGGCCCHHHHHHHCTTCCHHHHHH--H
T ss_pred HHHHHHHHHHHHHHH-HHHHH----------HHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHCCCCCCHHHHHH--C
T ss_conf 999999999999888-78888----------8999996799999999872498886007999950176548999864--3
Q ss_pred HHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 99989975402899999994167999999999999986133988766608899999997979999999999871513687
Q 001602 134 LLDQIEGIAKVPARIEKLIAGKQYYAAVQLHAQSALMLEREGLQTVGALQDVRSELTKLRGVLFYKVLEDLHAHLYNRGE 213 (1046)
Q Consensus 134 ~L~~Ie~l~~vP~~ie~~i~~k~y~~A~~lL~~~~~~l~~~~L~~i~aL~~lr~~l~~q~~~L~d~lieEL~~~LYlKs~ 213 (1046)
.+|+|+.+ ...+-+.++.+-.-.++- ++..+..--++-.-.-..|..+.-.-+.+||.++|.+.-
T Consensus 99 ~Vd~Vd~l--------------dLVqLQNiiKniillleI-Pf~KL~kKlPLiaI~LrYEk~lL~~FaNrLh~~~y~e~i 163 (206)
T 3oa7_A 99 MVEQIDSA--------------NLTTLQNTVKEIVLAVGI-PYPKLRRKIPLLAIKLKYENIMLSNFAQRLHRQVYSQEM 163 (206)
T ss_dssp TGGGGGGC--------------CHHHHHHHHHHHHHHHTC-CGGGHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHC--CC
T ss_pred CCCCCCCC--------------CHHHHHHHHHHHHHHHCC-CHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 74400221--------------299999999999986107-488973015532468998788999999999999956843
No 9
>4akg_A Glutathione S-transferase class-MU 26 kDa isozyme heavy chain cytoplasmic; motor protein, AAA+ protein, ASCE protein, P-loop ntpase; HET: ATP ADP; 3.30A {Schistosoma japonicum} PDB: 4ai6_A* 4akh_A* 4aki_A* 3qmz_A
Probab=1.00 E-value=1 Score=13.44 Aligned_cols=29 Identities=17% Similarity=0.480 Sum_probs=21.2
Q ss_pred CCCCCCHHHHHHHHHHHHHHCCCCCCCCH
Q ss_conf 88994369999999984840079999957
Q 001602 7 LPISPEKAYLREELARIEVSWVAPRFDSL 35 (1046)
Q Consensus 7 ~~~~~~~~~~~~~l~~i~~~w~~~~f~~~ 35 (1046)
.|+--.+..|++.|+.|+.+|....|+..
T Consensus 214 ~~~AskE~~iE~~L~~i~~~W~~~~f~~~ 242 (2695)
T 4akg_A 214 HPPKSDEFVIEKSLNRIKKFWKEAQYEVI 242 (2695)
T ss_dssp SCC----CHHHHHHHHHHHHHTSCCCEEE
T ss_pred CCCCCHHHHHHHHHHHHHHHHHCEEEEEE
T ss_conf 20000144589999999988646189999
No 10
>2vgl_A Adaptor protein complex AP-2, alpha 2 subunit; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Rattus norvegicus} PDB: 2xa7_A 2jkr_A 2jkt_A
Probab=1.00 E-value=1 Score=13.38 Aligned_cols=32 Identities=28% Similarity=0.326 Sum_probs=0.0
Q ss_pred HHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHH
Q ss_conf 89999998407999999999983799999999
Q 001602 987 DRVRTYYELLNMPFEALLAFVTEHENLFTTTE 1018 (1046)
Q Consensus 987 ~ra~~yyeL~~~~~~~ll~~i~e~~~~Fs~~E 1018 (1046)
+||..||.|+..+++++.+.+.+..+.|...+
T Consensus 578 dRA~~y~~Ll~~~~~~~~~~vl~~~P~~~~~~ 609 (621)
T 2vgl_A 578 QRAVEYLRLSTVASTDILATVLEEMPPFPERE 609 (621)
T ss_dssp HHHHHHHHHHHSSCSTTTTTTSSSCCCCCCC-
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCC
T ss_conf 99999999985699999988851389899764
Done!