Your job contains 1 sequence.
>001613
MNCSYSSYTAAPSVTDLETTLIINSLLEDDKKQLINVSKRHFIDNSLDNADQQTAIVTKL
LRVSCIFDSVSCATSLVNGDLGPVALVNEVEESSGMTALHLAAESHTARCVELLLKKRAR
TDIRSKDGRRLLPLELSLSSSRMDVIWNPDEYSVEDLVVILGQKNLTTVKLLSQKTKELD
EVAYANAVGGRIVALAALLIVAADKVNESILVLHDSDLGAKEKTTIYECVIREALALGRA
TKLQRAVKRNSTPTTSQSAEKRKLLLLEIELLQLFGAVANGSCTDKKVGPPLILATQAGD
EDVIEILLKSKNIDINDADADADGNSALHCALKTSMGLSQHILQNRIVGILLKHGAIVSQ
QNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLKTIMMETPLFFAVKNDHMVCAEVLLR
WGANSEVLNLRRERPIDFAKSQDMRFLLKAANTCHTNLAFLNQEKQNASLESDEDISGTC
EALLSMVDDNSNTERICSGTKIEVCKYYESHSGCIRGSKCFYALGEEQHRKMNPGMCMIH
ASTQEFKSKIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFK
HEKSAAAAVQARFVTIMGKEVEIKSAVPKEVLFAELQKQSAQQQESKHEHQARLGAKIPD
ERTMEQIISRNAKEEIQTKKITEEMPCRRVTEEATAEKSWAGRLLYGQPKTSSNESQAYL
VESFEEKSMPKWLRTFKKWLPRFLKDVYRHPLEGKYALSSLKTDFKAVCGLELDHASLGY
SKLSDFLRTLPDLCHVKAGPIGKNGSPNHMVLVPSPPKQKWGALQLSKNGNPSSPVNSAS
DSNECDRNDSKSPQDLRSVSISSTIERKPTNEVPKGSSSQRDTSTSAISASKKVIDYSTI
FSSSKPGLSSSKGNDGGSGGKDNEKGKGLENSKGKNPRPPEDHLVLRWLKGHNNSLFLRE
YDFSHEYNSCFKQKICFRCKKEEMQWANNPCQHLLWCNVCKRETIEAAAGSEHLCVICDK
KVEDIMLISNPEEFPPLSPSDTLQ
The BLAST search returned 5 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 001613
(1044 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2090749 - symbol:AT3G28880 "AT3G28880" species... 467 4.1e-61 2
UNIPROTKB|K7EQ02 - symbol:DAZAP1 "DAZ-associated protein ... 165 5.3e-11 1
ZFIN|ZDB-GENE-060621-2 - symbol:ank3b "ankyrin 3b" specie... 150 5.0e-10 3
UNIPROTKB|J9P972 - symbol:DAZAP1 "Uncharacterized protein... 165 1.8e-09 1
UNIPROTKB|K7EJ88 - symbol:DAZAP1 "DAZ-associated protein ... 165 5.1e-09 1
ASPGD|ASPL0000075867 - symbol:AN8767 species:162425 "Emer... 142 8.9e-09 2
UNIPROTKB|E1BAK6 - symbol:DAZAP1 "Uncharacterized protein... 165 9.1e-09 1
UNIPROTKB|F1NTG9 - symbol:DAZAP1 "Uncharacterized protein... 165 9.2e-09 1
RGD|1305280 - symbol:Dazap1 "DAZ associated protein 1" sp... 165 9.5e-09 1
MGI|MGI:1917498 - symbol:Dazap1 "DAZ associated protein 1... 165 9.6e-09 1
UNIPROTKB|F2Z3S1 - symbol:Dazap1 "Protein Dazap1" species... 165 9.6e-09 1
UNIPROTKB|I3LB68 - symbol:DAZAP1 "Uncharacterized protein... 165 9.6e-09 1
UNIPROTKB|E2R6E4 - symbol:DAZAP1 "Uncharacterized protein... 165 9.6e-09 1
UNIPROTKB|Q96EP5 - symbol:DAZAP1 "DAZ-associated protein ... 165 9.6e-09 1
TAIR|locus:2050992 - symbol:AT2G33410 species:3702 "Arabi... 168 1.1e-08 2
UNIPROTKB|Q98SJ2 - symbol:dazap1 "DAZ-associated protein ... 162 1.5e-08 1
MGI|MGI:3045243 - symbol:Ankrd44 "ankyrin repeat domain 4... 131 1.9e-08 2
DICTYBASE|DDB_G0292422 - symbol:DDB_G0292422 "RNA-binding... 160 2.9e-08 2
DICTYBASE|DDB_G0289189 - symbol:psmD10 "26S proteasome no... 152 3.2e-08 1
UNIPROTKB|Q8N8A2 - symbol:ANKRD44 "Serine/threonine-prote... 128 6.7e-08 3
ZFIN|ZDB-GENE-050522-247 - symbol:ankrd52a "ankyrin repea... 143 9.0e-08 2
UNIPROTKB|B7ZAU7 - symbol:RIPK4 "Receptor-interacting ser... 123 9.1e-08 2
UNIPROTKB|O15084 - symbol:ANKRD28 "Serine/threonine-prote... 124 1.2e-07 2
UNIPROTKB|F1MN41 - symbol:ASB3 "Ankyrin repeat and SOCS b... 149 1.2e-07 2
UNIPROTKB|Q08DV6 - symbol:ASB3 "Ankyrin repeat and SOCS b... 149 1.2e-07 2
FB|FBgn0260943 - symbol:Rbp6 "RNA-binding protein 6" spec... 154 1.3e-07 1
UNIPROTKB|P57078 - symbol:RIPK4 "Receptor-interacting ser... 123 1.3e-07 2
FB|FBgn0011747 - symbol:Ank "Ankyrin" species:7227 "Droso... 145 1.5e-07 2
ZFIN|ZDB-GENE-030131-618 - symbol:hnrnpa0l "heterogeneous... 150 2.1e-07 1
DICTYBASE|DDB_G0287459 - symbol:secG "Arf guanyl-nucleoti... 129 2.4e-07 2
UNIPROTKB|F1M3H8 - symbol:F1M3H8 "Uncharacterized protein... 138 2.4e-07 1
ZFIN|ZDB-GENE-030728-7 - symbol:trpn1 "transient receptor... 148 2.5e-07 2
UNIPROTKB|F1NJR5 - symbol:Gga.55799 "Uncharacterized prot... 155 2.7e-07 3
ZFIN|ZDB-GENE-070212-1 - symbol:dazap1 "DAZ associated pr... 160 2.8e-07 2
UNIPROTKB|F1MY81 - symbol:ANK1 "Uncharacterized protein" ... 142 3.0e-07 2
WB|WBGene00019249 - symbol:H28G03.1 species:6239 "Caenorh... 149 3.6e-07 1
UNIPROTKB|F1SQJ4 - symbol:ASB3 "Uncharacterized protein" ... 140 4.4e-07 2
WB|WBGene00006616 - symbol:trp-4 species:6239 "Caenorhabd... 146 4.7e-07 2
MGI|MGI:2145661 - symbol:Ankrd28 "ankyrin repeat domain 2... 117 4.9e-07 2
MGI|MGI:2444029 - symbol:Ankrd52 "ankyrin repeat domain 5... 118 5.0e-07 2
UNIPROTKB|B4DM51 - symbol:MSI2 "RNA-binding protein Musas... 145 5.0e-07 1
TAIR|locus:2129590 - symbol:AT4G14300 species:3702 "Arabi... 149 5.6e-07 1
UNIPROTKB|F8W646 - symbol:HNRNPA1 "Heterogeneous nuclear ... 127 6.0e-07 1
TAIR|locus:2164082 - symbol:AT5G53720 species:3702 "Arabi... 127 6.0e-07 1
TAIR|locus:2133862 - symbol:AT4G26650 species:3702 "Arabi... 149 6.8e-07 1
TAIR|locus:2173967 - symbol:AT5G55550 species:3702 "Arabi... 149 6.9e-07 1
UNIPROTKB|B4DHE8 - symbol:MSI2 "RNA-binding protein Musas... 145 9.1e-07 1
POMBASE|SPBC660.15 - symbol:SPBC660.15 "mRNA cleavage fac... 148 9.4e-07 1
UNIPROTKB|Q96DH6 - symbol:MSI2 "RNA-binding protein Musas... 145 9.4e-07 1
ZFIN|ZDB-GENE-030826-25 - symbol:msi2a "musashi homolog 2... 146 1.1e-06 1
MGI|MGI:1923876 - symbol:Msi2 "musashi RNA-binding protei... 145 1.1e-06 1
ZFIN|ZDB-GENE-030131-6154 - symbol:hnrnpa0b "heterogeneou... 144 1.1e-06 1
ZFIN|ZDB-GENE-041014-19 - symbol:si:dkey-86e18.2 "si:dkey... 117 1.1e-06 2
WB|WBGene00003423 - symbol:msi-1 species:6239 "Caenorhabd... 144 1.1e-06 1
UNIPROTKB|Q9Y575 - symbol:ASB3 "Ankyrin repeat and SOCS b... 134 1.2e-06 2
UNIPROTKB|F1NJ80 - symbol:ANK3 "Uncharacterized protein" ... 138 1.3e-06 2
UNIPROTKB|F1NNX8 - symbol:ANK3 "Uncharacterized protein" ... 138 1.4e-06 2
ZFIN|ZDB-GENE-040426-1268 - symbol:msi2b "musashi homolog... 145 1.5e-06 1
RGD|620156 - symbol:Ank2 "ankyrin 2, neuronal" species:10... 124 1.8e-06 2
FB|FBgn0011666 - symbol:msi "musashi" species:7227 "Droso... 147 1.9e-06 1
UNIPROTKB|P98179 - symbol:RBM3 "Putative RNA-binding prot... 122 2.0e-06 1
FB|FBgn0004838 - symbol:Hrb27C "Heterogeneous nuclear rib... 144 2.1e-06 1
UNIPROTKB|J9NTH2 - symbol:ANK2 "Uncharacterized protein" ... 125 2.2e-06 3
UNIPROTKB|Q5ZME1 - symbol:HNRNPA2B1 "Uncharacterized prot... 142 2.3e-06 1
UNIPROTKB|H0YHB7 - symbol:MSI1 "RNA-binding protein Musas... 137 2.4e-06 1
TAIR|locus:2037633 - symbol:RBP1 "RNA-binding protein 1" ... 142 2.5e-06 1
RGD|1311691 - symbol:Ripk4 "receptor-interacting serine-t... 117 2.5e-06 2
UNIPROTKB|F6VZ39 - symbol:RBM38 "RNA-binding protein 38" ... 120 3.4e-06 1
UNIPROTKB|J3KTC1 - symbol:MSI2 "RNA-binding protein Musas... 120 3.4e-06 1
UNIPROTKB|I3L5X7 - symbol:RBM3 "Uncharacterized protein" ... 120 3.4e-06 1
MGI|MGI:1099460 - symbol:Rbm3 "RNA binding motif protein ... 120 3.4e-06 1
UNIPROTKB|G3V6P6 - symbol:Rbm3 "Putative RNA-binding prot... 120 3.4e-06 1
RGD|1563684 - symbol:Hnrnpa0 "heterogeneous nuclear ribon... 135 3.6e-06 1
UNIPROTKB|Q13151 - symbol:HNRNPA0 "Heterogeneous nuclear ... 139 3.6e-06 1
FB|FBgn0016920 - symbol:nompC "no mechanoreceptor potenti... 140 4.1e-06 2
CGD|CAL0003460 - symbol:orf19.5989 species:5476 "Candida ... 142 4.2e-06 1
ZFIN|ZDB-GENE-061027-46 - symbol:gabpb1 "GA binding prote... 140 4.3e-06 1
UNIPROTKB|E2R771 - symbol:RBM3 "Uncharacterized protein" ... 119 4.3e-06 1
UNIPROTKB|F1NA51 - symbol:ANK3 "Uncharacterized protein" ... 138 4.7e-06 3
UNIPROTKB|F1NCI5 - symbol:HNRNPA0 "Uncharacterized protei... 145 4.9e-06 2
UNIPROTKB|F1LM82 - symbol:Hnrnpa2b1 "Heterogeneous nuclea... 138 5.0e-06 1
UNIPROTKB|F6RBQ9 - symbol:F6RBQ9 "Uncharacterized protein... 118 5.5e-06 1
UNIPROTKB|F1NNX6 - symbol:ANK3 "Uncharacterized protein" ... 138 5.8e-06 3
UNIPROTKB|Q2HJ60 - symbol:HNRNPA2B1 "Heterogeneous nuclea... 138 6.1e-06 1
UNIPROTKB|Q9TTV2 - symbol:HNRNPA2B1 "Heterogeneous nuclea... 138 6.1e-06 1
UNIPROTKB|F1P9D4 - symbol:RIPK4 "Uncharacterized protein"... 117 6.5e-06 2
UNIPROTKB|F1LNF1 - symbol:Hnrnpa2b1 "Heterogeneous nuclea... 138 6.6e-06 1
UNIPROTKB|F1Q1K6 - symbol:HNRNPA2B1 "Uncharacterized prot... 138 6.6e-06 1
UNIPROTKB|P22626 - symbol:HNRNPA2B1 "Heterogeneous nuclea... 138 6.6e-06 1
UNIPROTKB|F1RX74 - symbol:HNRNPA2B1 "Uncharacterized prot... 138 6.6e-06 1
UNIPROTKB|Q5RBU8 - symbol:HNRNPA2B1 "Heterogeneous nuclea... 138 6.6e-06 1
MGI|MGI:104819 - symbol:Hnrnpa2b1 "heterogeneous nuclear ... 138 6.6e-06 1
RGD|1310403 - symbol:Hnrnpa2b1 "heterogeneous nuclear rib... 138 6.6e-06 1
MGI|MGI:1919638 - symbol:Ripk4 "receptor-interacting seri... 114 6.7e-06 2
UNIPROTKB|F1NNX7 - symbol:ANK3 "Uncharacterized protein" ... 138 6.7e-06 3
UNIPROTKB|F8VTQ5 - symbol:HNRNPA1 "Heterogeneous nuclear ... 117 7.0e-06 1
UNIPROTKB|F1LRH1 - symbol:Msi1 "RNA-binding protein Musas... 137 7.3e-06 1
UNIPROTKB|I3LPG0 - symbol:MSI1 "Uncharacterized protein" ... 137 7.5e-06 1
UNIPROTKB|E2R235 - symbol:ASB3 "Uncharacterized protein" ... 139 7.5e-06 2
ZFIN|ZDB-GENE-030131-2249 - symbol:hnrnpa0a "heterogeneou... 136 7.9e-06 1
WARNING: Descriptions of 302 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2090749 [details] [associations]
symbol:AT3G28880 "AT3G28880" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR002110
PROSITE:PS50088 SMART:SM00248 EMBL:CP002686 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
InterPro:IPR025605 Pfam:PF12872 IPI:IPI00521291 RefSeq:NP_189530.2
UniGene:At.42708 UniGene:At.53549 ProteinModelPortal:F4J0F6
SMR:F4J0F6 PRIDE:F4J0F6 EnsemblPlants:AT3G28880.1 GeneID:822522
KEGG:ath:AT3G28880 OMA:INCASSI Uniprot:F4J0F6
Length = 772
Score = 467 (169.5 bits), Expect = 4.1e-61, Sum P(2) = 4.1e-61
Identities = 117/296 (39%), Positives = 165/296 (55%)
Query: 149 PDEYSVED--LVVILGQKNLTTVKLLSQKTKELDEVAYANXXXXXXXXXXXXXXXXXDKV 206
P E S+ + L+V+LG K+LT VKLL++KTKE+D VAYA K+
Sbjct: 174 PLELSLSNVRLIVLLGDKDLTVVKLLAEKTKEVDVVAYAYAKAGEIVSLTALLIVASGKI 233
Query: 207 NESILVLHDSDLGAKEKTTIYECVIREALALGRATKLQRAVKRNSTPTTSQSAEKRKXXX 266
E+ + L D D + ++ + RE + A +Q A++ NS T S +EKR
Sbjct: 234 REATVALRDDD----DDDSVAK---RERKTIYEAV-IQEALRSNSL-TQSVCSEKRMVLL 284
Query: 267 XXXXXXXXFGAVANGSCTDKKVGPPLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNS 326
FGA DK+ P LI QAGDE V+E+ + + GN+
Sbjct: 285 REIELLQLFGAAVFSESVDKQTSP-LISIVQAGDEAVLELFINTNFDVNEKNIE---GNT 340
Query: 327 ALHCALKTSMGLSQHILQNRIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIR 386
L C+LK S H Q RI+ +L+ HGA V+Q+NKLGL+A+H AA +GN LE L+
Sbjct: 341 VLQCSLKGSS--VPHNQQTRIMNLLIAHGARVNQKNKLGLSAVHFAAANGNLSTLEILLA 398
Query: 387 KEPDCINLKTIMMETPLFFAVKNDHMVCAEVLLRWGANSEVLNLRRERPIDFAKSQ 442
PD +N+KT++ ETPLFFAVKN+H+ C E+LLR GA +E+ NLR+E + A+SQ
Sbjct: 399 ANPDLVNMKTVIKETPLFFAVKNNHLDCVELLLRCGAITEIHNLRKET--ELAQSQ 452
Score = 360 (131.8 bits), Expect = 6.6e-49, Sum P(2) = 6.6e-49
Identities = 88/233 (37%), Positives = 131/233 (56%)
Query: 23 INSLLEDDKKQLINVSKRHFIDNSLDNADQQTAIVTKLLRVSCIFDSVSCATSLVNGDLG 82
+ S L+D+K Q I+ +KR + ++A+ + KLL C +DS++CA+S++NGD+G
Sbjct: 67 LESGLKDNKSQFISYAKRILVG---EDAESERIEDLKLLTACCSYDSINCASSIINGDVG 123
Query: 83 PVALVNEVEESSGMTALHLAAESHTARCVELLLKKRARTDIRSKDGXXXXXXXXXXXXXX 142
V +N++ +G++ LH AAESH CVE+LLK+RARTD+RSKD
Sbjct: 124 SVPYINDICSDTGLSLLHTAAESHAPLCVEMLLKRRARTDMRSKDERALI---------- 173
Query: 143 MDVIWNPDEYSVED--LVVILGQKNLTTVKLLSQKTKELDEVAYANXXXXXXXXXXXXXX 200
P E S+ + L+V+LG K+LT VKLL++KTKE+D VAYA
Sbjct: 174 ------PLELSLSNVRLIVLLGDKDLTVVKLLAEKTKEVDVVAYAYAKAGEIVSLTALLI 227
Query: 201 XXXDKVNESILVLHDSD----LGAKEKTTIYECVIREALALGRATKLQRAVKR 249
K+ E+ + L D D + +E+ TIYE VI+EAL T+ + KR
Sbjct: 228 VASGKIREATVALRDDDDDDSVAKRERKTIYEAVIQEALRSNSLTQSVCSEKR 280
Score = 235 (87.8 bits), Expect = 4.1e-61, Sum P(2) = 4.1e-61
Identities = 60/200 (30%), Positives = 100/200 (50%)
Query: 709 PKTSSNESQAYLVESFEEKSMPKWLRTFKKWLPRFLKDVYRHPLEGKYALSSLKTDFKAV 768
P S E+ +L +S +P WL+TF WLP +L+D + Y LSS K DF+AV
Sbjct: 458 PNASDEETLGFLGDS-----VPTWLKTFVTWLPLYLRDTSANWKGAGYPLSSFKADFRAV 512
Query: 769 CGLELDHASLGYSKLSDFLRTLPDLCHVKAGPIGKNGSPNHMVLVPSPPK------QKWG 822
G++LDH SL + K DF++ P LC +K PIGK G+ H V++P+ K +
Sbjct: 513 FGMDLDHTSLDFPKHIDFVKYFPRLCQMKVVPIGKLGAATHWVMLPTKSKCSQLKERPPE 572
Query: 823 ALQLSKNGNPSSPVNSASDSNECDRNDSKSPQDLRSVSISSTIERKPTNEVPKG-SSSQR 881
L ++KN + +SP + S D + D ++ S + +P + +++QR
Sbjct: 573 PLIITKNDSVASPSKPKALSVPPDFKFIQEAHDSKTFKASPQPKAQPPPPLTASYNNNQR 632
Query: 882 DTSTSAISASKKVIDYSTIF 901
+ K+ + +++F
Sbjct: 633 QLKHPVLETLTKIRNSTSVF 652
Score = 215 (80.7 bits), Expect = 5.2e-59, Sum P(2) = 5.2e-59
Identities = 47/114 (41%), Positives = 64/114 (56%)
Query: 929 LENSKGKNPRPPEDHLVLRWLKGHNNS---LFLREYDFSHEYNSCFKQKICFRCKKEEMQ 985
L S N R + H VL L NS FLRE+DF Y +C K+ +CF C K ++
Sbjct: 623 LTASYNNNQRQLK-HPVLETLTKIRNSTSVFFLREFDFYQSYETCLKEGMCFWCNKNMIR 681
Query: 986 WANNPCQHLLWCNVCKRETIEAAAGSE------HLCVICDKKVEDIMLISNPEE 1033
WAN PC+H LWC+ CK++ ++ +G + H CV+CD KVE +L S P E
Sbjct: 682 WANFPCRHKLWCSSCKQQITQSTSGEKILEEDHHKCVVCDAKVERFVL-SPPFE 734
Score = 49 (22.3 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 97 TALHLAAESHTARCVELLLKKRARTDIRS 125
T L A +++ CVELLL+ A T+I +
Sbjct: 413 TPLFFAVKNNHLDCVELLLRCGAITEIHN 441
Score = 48 (22.0 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 20/76 (26%), Positives = 39/76 (51%)
Query: 42 FIDNSLDNADQQTAIVTKLLRVSCIFDSV--SCATSLVNGDLGPVALVNEVEESSGMTAL 99
FI+ + D +++ +L+ S SV + T ++N + A VN+ + G++A+
Sbjct: 324 FINTNFD-VNEKNIEGNTVLQCSLKGSSVPHNQQTRIMNLLIAHGARVNQ-KNKLGLSAV 381
Query: 100 HLAAESHTARCVELLL 115
H AA + +E+LL
Sbjct: 382 HFAAANGNLSTLEILL 397
Score = 43 (20.2 bits), Expect = 6.4e-41, Sum P(2) = 6.4e-41
Identities = 5/16 (31%), Positives = 11/16 (68%)
Query: 507 YYESHSGCIRGSKCFY 522
+Y+S+ C++ CF+
Sbjct: 659 FYQSYETCLKEGMCFW 674
Score = 39 (18.8 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 35/158 (22%), Positives = 68/158 (43%)
Query: 365 GLTALHIAAGSGNSQALEDLIRKEPDC-INLKTIMMETPLFFAVKNDHMVCAEVLLRWGA 423
GL+ LH AA S +E L+++ + K PL ++ N ++ VLL
Sbjct: 136 GLSLLHTAAESHAPLCVEMLLKRRARTDMRSKDERALIPLELSLSNVRLI---VLLG-DK 191
Query: 424 NSEVLNLRRERP--ID-----FAKSQDM----RFLLKAANTCHTNLAFLNQEKQNASLES 472
+ V+ L E+ +D +AK+ ++ L+ A+ L + + S+
Sbjct: 192 DLTVVKLLAEKTKEVDVVAYAYAKAGEIVSLTALLIVASGKIREATVALRDDDDDDSVAK 251
Query: 473 DEDISGTCEALLS-MVDDNSNTERICSGTKIEVCKYYE 509
E + EA++ + NS T+ +CS ++ + + E
Sbjct: 252 RERKT-IYEAVIQEALRSNSLTQSVCSEKRMVLLREIE 288
>UNIPROTKB|K7EQ02 [details] [associations]
symbol:DAZAP1 "DAZ-associated protein 1" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
Gene3D:3.30.70.330 HGNC:HGNC:2683 EMBL:AC005329 EMBL:AC027307
Ensembl:ENST00000592453 Uniprot:K7EQ02
Length = 225
Score = 165 (63.1 bits), Expect = 5.3e-11, P = 5.3e-11
Identities = 38/83 (45%), Positives = 51/83 (61%)
Query: 548 SKIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKHEKSAAA 607
+KIFVGG+P L YF+K FG + + V + EKQ RGFGF+TF+ E+S
Sbjct: 91 NKIFVGGIPHNCGETELREYFKK-FGVVTEV-VMIYDAEKQR-PRGFGFITFEDEQSVDQ 147
Query: 608 AVQARFVTIMGKEVEIKSAVPKE 630
AV F IMGK+VE+K A P++
Sbjct: 148 AVNMHFHDIMGKKVEVKRAEPRD 170
>ZFIN|ZDB-GENE-060621-2 [details] [associations]
symbol:ank3b "ankyrin 3b" species:7955 "Danio rerio"
[GO:0007165 "signal transduction" evidence=IEA] InterPro:IPR000488
Pfam:PF00531 InterPro:IPR002110 Pfam:PF00023 PRINTS:PR01415
PROSITE:PS50017 PROSITE:PS50088 SMART:SM00005 SMART:SM00248
ZFIN:ZDB-GENE-060621-2 GO:GO:0007165 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
InterPro:IPR000906 Pfam:PF00791 SMART:SM00218 PROSITE:PS51145
GeneTree:ENSGT00700000104348 EMBL:BX548028 EMBL:CABZ01050059
EMBL:CABZ01050060 EMBL:CABZ01050061 EMBL:CABZ01050062
EMBL:CABZ01050063 IPI:IPI00615714 Ensembl:ENSDART00000088100
Uniprot:F1QNB3
Length = 3888
Score = 150 (57.9 bits), Expect = 5.0e-10, Sum P(3) = 5.0e-10
Identities = 69/265 (26%), Positives = 106/265 (40%)
Query: 235 LALGRATKLQRAVKRNSTPTTSQSAEKRKXXXXXXXXXXXFGAVANGSCTDKKVGPPLIL 294
L L + A K TP A K K +GA N + T + + P L L
Sbjct: 579 LLLDQGASPHAAAKNGYTPL--HIAAK-KNQMEIATTLLEYGADTNAA-TRQGISP-LHL 633
Query: 295 ATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKTSMGLSQHILQNRIVGILLKH 354
A Q G+ D++ +LL + G + +H A +Q N + +L+ H
Sbjct: 634 AAQEGNVDMVTLLLAREAAVSLGNKS---GLTPIHLA-------AQEDRVN-VSEVLVNH 682
Query: 355 GAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLKTIMMETPLFFAVKNDHMVC 414
GA V + K+G T LH+A GN + + L++ + +N KT TPL A + H
Sbjct: 683 GATVDPETKMGYTPLHVACHYGNVKMVHFLLKNQAK-VNAKTKNGYTPLHQAAQQGHTHI 741
Query: 415 AEVLLRWGANSEVLNLRRERPIDFAKSQDMRFL---LKAANT-CHTNLAFLNQEKQNASL 470
+LL+ GA+ L + + A+ + LKA HT + + K N
Sbjct: 742 INLLLQHGASPNELTVNGNTALAIARRLGYISVVDTLKAVTEETHTTVTVTEKHKMN--- 798
Query: 471 ESDEDISGTCEALLSMVDDNSNTER 495
+ T +L M DD T R
Sbjct: 799 -----VPETMNEVLDMSDDEDYTVR 818
Score = 112 (44.5 bits), Expect = 4.0e-06, Sum P(3) = 4.0e-06
Identities = 43/149 (28%), Positives = 65/149 (43%)
Query: 291 PLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKTSMGLSQHILQNRIVGI 350
PL ++G E V+E+LL G S LH A + H+ V +
Sbjct: 267 PLHCGARSGHEQVVEMLLDR---GAPILSKTKNGLSPLHMATQ-----GDHL---NCVQL 315
Query: 351 LLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLKTIMMETPLFFAVKND 410
L+ H V LTALH+AA G+ + + L+ K + N K + TPL A K +
Sbjct: 316 LIHHEVPVDDVTNDYLTALHVAAHCGHYKVAKVLVDKRANP-NAKALNGFTPLHIACKKN 374
Query: 411 HMVCAEVLLRWGANSEVLNLRRERPIDFA 439
+ E+LL+ GA+ + + PI A
Sbjct: 375 RIKVMELLLKHGASIQAVTESGLTPIHVA 403
Score = 98 (39.6 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 54/238 (22%), Positives = 94/238 (39%)
Query: 211 LVLHDSDLGAKEKTTIYECVIREALALGRATKLQRAVKRNSTPTTSQSAEKRKXXXXXXX 270
LV + +D+ AK K + + + LG+ +Q+ ++ + P ++ ++
Sbjct: 448 LVANGADVDAKAKDD--QTPLHISSRLGKPDIVQQLLQHGALPDSTTTSGYTPLHLAARD 505
Query: 271 XXXXFGAVA--NGSC---TDKKVGPPLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGN 325
++ NG+ T KK PL +A + G +V +LL+ + G
Sbjct: 506 GHKDVASILLDNGASLGITTKKGFTPLHVAAKYGKMEVANLLLQKRAPPDAA------GK 559
Query: 326 SALHCALKTSMGLSQHILQNRIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLI 385
S L T + ++ H ++ +LL GA K G T LHIAA + L+
Sbjct: 560 SGL-----TPLHVAAHYDNQKVALLLLDQGASPHAAAKNGYTPLHIAAKKNQMEIATTLL 614
Query: 386 RKEPDCINLKTIMMETPLFFAVKNDHMVCAEVLLRWGANSEVLNLRRERPIDFAKSQD 443
D N T +PL A + ++ +LL A + N PI A +D
Sbjct: 615 EYGADT-NAATRQGISPLHLAAQEGNVDMVTLLLAREAAVSLGNKSGLTPIHLAAQED 671
Score = 91 (37.1 bits), Expect = 5.0e-10, Sum P(3) = 5.0e-10
Identities = 33/119 (27%), Positives = 58/119 (48%)
Query: 22 IINSLLEDDKKQLINVSKRHFIDNSLD------------NADQQTAIVTKLLRVSCIFDS 69
+++ LLE+D K + + H D NAD ++ L ++ + +
Sbjct: 151 VVSLLLENDTKGKVRLPALHIAARKDDTKAAALLLQNDHNADIESKSGFTPLHIAAHYGN 210
Query: 70 VSCATSLVNGDLGPVALVNEVEESSGMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
++ AT L+N A V + + + +T LH+A++ A V LLL++ AR D R+KDG
Sbjct: 211 INVATLLLNRG----AAV-DFKARNDITPLHVASKRGNANMVRLLLERGARIDARTKDG 264
Score = 65 (27.9 bits), Expect = 2.0e-07, Sum P(3) = 2.0e-07
Identities = 15/39 (38%), Positives = 19/39 (48%)
Query: 90 VEESSGMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
+ G T LH+AA+ LLL+KRA D K G
Sbjct: 523 ITTKKGFTPLHVAAKYGKMEVANLLLQKRAPPDAAGKSG 561
Score = 64 (27.6 bits), Expect = 2.6e-07, Sum P(3) = 2.6e-07
Identities = 14/33 (42%), Positives = 20/33 (60%)
Query: 95 GMTALHLAAESHTARCVELLLKKRARTDIRSKD 127
G TALH+AA + A V+ L+ A D ++KD
Sbjct: 429 GETALHMAARAGQANVVKFLVANGADVDAKAKD 461
Score = 60 (26.2 bits), Expect = 5.0e-10, Sum P(3) = 5.0e-10
Identities = 30/106 (28%), Positives = 47/106 (44%)
Query: 789 TLPDLCHVKAGPIGKNGSPNHMVLVPSPPKQKWGALQLSKNGNPSSPVNSASDSNECDRN 848
T+P K G + SP++ SP K W +S S + +++ S +
Sbjct: 1477 TVPG--QTKCGLGSLSSSPSNTPSA-SPLKSVWS---ISSASPVKSTLGTSNASPAKSIS 1530
Query: 849 DSKSP-QDLRSVSIS-STIERKPTNEVPKGSS---SQRDTSTSAIS 889
D SP + RS+S T+ ++P N+VP SS S T T +S
Sbjct: 1531 DVASPIRTYRSMSSPIKTVVQQPQNQVPISSSLLSSPGKTGTDPVS 1576
Score = 59 (25.8 bits), Expect = 8.1e-07, Sum P(3) = 8.1e-07
Identities = 17/61 (27%), Positives = 35/61 (57%)
Query: 68 DSVSCATSLVNGDLGPVALVNEVEESSGMTALHLAAESHTARCVELLLKKRARTDIRSKD 127
D ++C L++ ++ PV ++V +TALH+AA + ++L+ KRA + ++ +
Sbjct: 308 DHLNCVQLLIHHEV-PV---DDVTNDY-LTALHVAAHCGHYKVAKVLVDKRANPNAKALN 362
Query: 128 G 128
G
Sbjct: 363 G 363
Score = 59 (25.8 bits), Expect = 8.1e-07, Sum P(3) = 8.1e-07
Identities = 27/108 (25%), Positives = 52/108 (48%)
Query: 35 INVSKRHFIDNSLDNADQQ--TAIVTKLLRVSCIFDSVSCA--TSLVNGDLGPVA----- 85
IN+ ++ + N+L A ++ +VT+L+++ D+ + T+L L A
Sbjct: 30 INICNQNGL-NALHLASKEGHVEVVTELIKLGATVDAATKKGNTALHIASLAGQADVVKE 88
Query: 86 LVNE-----VEESSGMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
LVN + +G T L++AA+ + V+ LL + I ++DG
Sbjct: 89 LVNNGANINAQSQNGFTPLYMAAQENHLDVVKFLLDNGSSQSIATEDG 136
Score = 56 (24.8 bits), Expect = 1.6e-06, Sum P(3) = 1.6e-06
Identities = 12/35 (34%), Positives = 20/35 (57%)
Query: 94 SGMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
+G T LH+A + + + +ELLLK A ++ G
Sbjct: 362 NGFTPLHIACKKNRIKVMELLLKHGASIQAVTESG 396
Score = 55 (24.4 bits), Expect = 2.0e-06, Sum P(3) = 2.0e-06
Identities = 13/40 (32%), Positives = 21/40 (52%)
Query: 89 EVEESSGMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
+ G+T LH A S + VE+LL + A ++K+G
Sbjct: 258 DARTKDGLTPLHCGARSGHEQVVEMLLDRGAPILSKTKNG 297
Score = 53 (23.7 bits), Expect = 3.2e-06, Sum P(3) = 3.2e-06
Identities = 10/34 (29%), Positives = 18/34 (52%)
Query: 94 SGMTALHLAAESHTARCVELLLKKRARTDIRSKD 127
+G++ LH+A + CV+LL+ D + D
Sbjct: 296 NGLSPLHMATQGDHLNCVQLLIHHEVPVDDVTND 329
Score = 53 (23.7 bits), Expect = 3.2e-06, Sum P(3) = 3.2e-06
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 94 SGMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
SG+T LH+AA + LLL + A +K+G
Sbjct: 560 SGLTPLHVAAHYDNQKVALLLLDQGASPHAAAKNG 594
Score = 52 (23.4 bits), Expect = 4.0e-06, Sum P(3) = 4.0e-06
Identities = 14/36 (38%), Positives = 17/36 (47%)
Query: 93 SSGMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
+SG T LHLAA +LL A I +K G
Sbjct: 493 TSGYTPLHLAARDGHKDVASILLDNGASLGITTKKG 528
Score = 41 (19.5 bits), Expect = 4.1e-08, Sum P(3) = 4.1e-08
Identities = 24/89 (26%), Positives = 39/89 (43%)
Query: 811 VLVPSPPKQKWGALQLSKNGNPS-SP------VNSASDSNECDRNDSKSPQDLRSVS-IS 862
+ VP K G+L S + PS SP ++SAS + SP +S+S ++
Sbjct: 1476 ITVPGQTKCGLGSLSSSPSNTPSASPLKSVWSISSASPVKSTLGTSNASPA--KSISDVA 1533
Query: 863 STIERKPTNEVPKGSSSQRDTSTSAISAS 891
S I + P + Q+ + IS+S
Sbjct: 1534 SPIRTYRSMSSPIKTVVQQPQNQVPISSS 1562
Score = 40 (19.1 bits), Expect = 5.1e-08, Sum P(3) = 5.1e-08
Identities = 42/198 (21%), Positives = 71/198 (35%)
Query: 705 LYGQPKTSSNESQAYLVESFEEKSMPKWLRTFKKWL-PRFLKDVYRHPLEGKYALSSLKT 763
L P + + + + +S KS +FK L P + P+ +LSS+K+
Sbjct: 1590 LISSPGSMLDRTFTTVTQSDSIKSTTNTYTSFKSTLAPTSI--AVSSPIRNISSLSSIKS 1647
Query: 764 DFKAVCGLELDHASLGYSKLSDFLRTLPDLCHVKAGPIGKN-GSPNHMVLVPSPPKQKWG 822
A G L +SL S T + + P+ S + L
Sbjct: 1648 TTDAARGTFL--SSLSSSAKPTTASTETVMLNGSVSPLKYPISSSSSSRLFSGGAYSLQE 1705
Query: 823 ALQLSKNGNPSSPVNSASDSNECDRNDSKSPQDLRSVSISSTIERKPTNEVPKGSSSQRD 882
+Q + +S + S++ SKS S+SS + T+ V + S
Sbjct: 1706 RIQATTQAATASVGAAFSEAERTVTGGSKSNYSTLK-SVSSPLRSHLTSSVYESLRSPVT 1764
Query: 883 TSTSAISASKKVIDYSTI 900
T+T S S V +S +
Sbjct: 1765 TTTPMTSVSMSVPVFSVV 1782
Score = 39 (18.8 bits), Expect = 7.1e-07, Sum P(4) = 7.1e-07
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 862 SSTIERKPTNEVPKGSSSQRDTSTSAISA 890
+ T+ER T +P G + + ST + A
Sbjct: 1442 TKTVERSTTRTLPAGYTHKPVFSTRSYQA 1470
Score = 38 (18.4 bits), Expect = 8.1e-08, Sum P(3) = 8.1e-08
Identities = 8/29 (27%), Positives = 13/29 (44%)
Query: 635 ELQKQSAQQQESKHEHQARLGAKIPDERT 663
+++ Q Q + R G + P ERT
Sbjct: 3751 DVRSQVEQSGRDRRRRSRRTGPQTPCERT 3779
Score = 38 (18.4 bits), Expect = 7.1e-07, Sum P(4) = 7.1e-07
Identities = 10/30 (33%), Positives = 13/30 (43%)
Query: 834 SPVNSASDSNECDRNDSKSPQDLRSVSISS 863
S V D+ D + PQDLR + S
Sbjct: 832 SDVEEGEDAMTGDTDKYLGPQDLRELGDDS 861
Score = 38 (18.4 bits), Expect = 9.7e-05, Sum P(3) = 9.7e-05
Identities = 9/19 (47%), Positives = 13/19 (68%)
Query: 85 ALVNEVEESSGMTALHLAA 103
A + V ES G+T +H+AA
Sbjct: 387 ASIQAVTES-GLTPIHVAA 404
Score = 37 (18.1 bits), Expect = 1.0e-07, Sum P(3) = 1.0e-07
Identities = 7/27 (25%), Positives = 13/27 (48%)
Query: 622 EIKSAVPKEVLFAELQKQSAQQQESKH 648
E K + P E+ + + Q++ KH
Sbjct: 3032 EKKGSTPSSEAETEMMEVNLQEEHDKH 3058
Score = 37 (18.1 bits), Expect = 1.0e-07, Sum P(3) = 1.0e-07
Identities = 30/141 (21%), Positives = 47/141 (33%)
Query: 806 SPNHMVLVPSPPKQKWGALQLSKNGNPSSPVNSASDSNECDRNDSKSPQDLRSVSISST- 864
SP+H+ + P Q G L+L K +S S E +D+ S + + S
Sbjct: 2818 SPSHIPTLTRPRVQ--GRLELQKED--ASTTKPEEVSVESKTSDTSSVEKFTVTTRESFK 2873
Query: 865 -IERKPTN-EVPKGSSSQRDTSTSAISASKKVI--DYSTIFXXXXXXXXXXXXXXXXXXX 920
++ P V G S +D KKV + T++
Sbjct: 2874 GLKTLPVYVSVQMGKQSDKDMGGGTNGTIKKVSGSESRTVYAVKQKQPTSPQGSPDDDTL 2933
Query: 921 XXXXXXXXLENSKGKNPRPPE 941
+S GK+P PE
Sbjct: 2934 EQFSFI----DSSGKSPMTPE 2950
Score = 37 (18.1 bits), Expect = 0.00074, Sum P(3) = 0.00074
Identities = 10/43 (23%), Positives = 22/43 (51%)
Query: 462 NQEKQNASLESDEDISGTCEALLSMVDDNSNTERICSGTKIEV 504
+ +K+ + + DE+ S + LS ++S+T R + +V
Sbjct: 3714 SDDKKIQTYDHDEESSTSRNTSLSEALESSSTSRSARDVRSQV 3756
>UNIPROTKB|J9P972 [details] [associations]
symbol:DAZAP1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00700000104255 EMBL:AAEX03012650 EMBL:AAEX03012651
Ensembl:ENSCAFT00000049246 Uniprot:J9P972
Length = 258
Score = 165 (63.1 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 38/83 (45%), Positives = 51/83 (61%)
Query: 548 SKIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKHEKSAAA 607
+KIFVGG+P L YF+K FG + + V + EKQ RGFGF+TF+ E+S
Sbjct: 140 NKIFVGGIPHNCGETELREYFKK-FGVVTEV-VMIYDAEKQR-PRGFGFITFEDEQSVDQ 196
Query: 608 AVQARFVTIMGKEVEIKSAVPKE 630
AV F IMGK+VE+K A P++
Sbjct: 197 AVNMHFHDIMGKKVEVKRAEPRD 219
Score = 118 (46.6 bits), Expect = 0.00054, P = 0.00054
Identities = 37/125 (29%), Positives = 59/125 (47%)
Query: 514 CIRGSKCFYALGEEQHRKMNP-GM--CMIHASTQEFKS------KIFVGGLPFFLDSDSL 564
C+ GS+ G + R P G H+S K+ K+FVGGL + ++L
Sbjct: 12 CLGGSRPRQPTGGRKERLGGPEGTSGAPSHSSVSARKAAQAALRKLFVGGLDWSTTQETL 71
Query: 565 GGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKHEKSAAAAVQARFVTIMGKEVEIK 624
YF + +G + D + + +T QS RGFGFV FK + +R T+ G+ ++ K
Sbjct: 72 RSYFSQ-YGEVVDCVIMKDKTTNQS--RGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPK 128
Query: 625 SAVPK 629
P+
Sbjct: 129 QKGPR 133
>UNIPROTKB|K7EJ88 [details] [associations]
symbol:DAZAP1 "DAZ-associated protein 1" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
Gene3D:3.30.70.330 HGNC:HGNC:2683 EMBL:AC005329 EMBL:AC027307
Ensembl:ENST00000591830 Uniprot:K7EJ88
Length = 321
Score = 165 (63.1 bits), Expect = 5.1e-09, P = 5.1e-09
Identities = 38/83 (45%), Positives = 51/83 (61%)
Query: 548 SKIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKHEKSAAA 607
+KIFVGG+P L YF+K FG + + V + EKQ RGFGF+TF+ E+S
Sbjct: 56 NKIFVGGIPHNCGETELREYFKK-FGVVTEV-VMIYDAEKQR-PRGFGFITFEDEQSVDQ 112
Query: 608 AVQARFVTIMGKEVEIKSAVPKE 630
AV F IMGK+VE+K A P++
Sbjct: 113 AVNMHFHDIMGKKVEVKRAEPRD 135
>ASPGD|ASPL0000075867 [details] [associations]
symbol:AN8767 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR002110 PRINTS:PR01415 PROSITE:PS50088
SMART:SM00248 eggNOG:COG0666 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 EMBL:BN001303
EMBL:AACD01000161 RefSeq:XP_682036.1 ProteinModelPortal:Q5ASG3
EnsemblFungi:CADANIAT00006298 GeneID:2868385 KEGG:ani:AN8767.2
HOGENOM:HOG000178421 OMA:RADNEGS OrthoDB:EOG4M68RS Uniprot:Q5ASG3
Length = 855
Score = 142 (55.0 bits), Expect = 8.9e-09, Sum P(2) = 8.9e-09
Identities = 47/158 (29%), Positives = 74/158 (46%)
Query: 279 ANGSCTDKKVGPPLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKTSMGL 338
A+ + DK PL +AT+ D +++ +L++ G + LH A+ +
Sbjct: 616 ADVNAADKSGQTPLDIATKQNDLELMNVLMEH---GAEIDSVTEEGATPLHQAI-----I 667
Query: 339 SQHILQNRIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLKTIM 398
++ + I +LL+HGA Q+ G LH AA SG + E L+ K D I++
Sbjct: 668 NE---REDIAEVLLEHGADPEAQDSHGDAPLHFAAASGRRKMAELLLDKGVD-IDITNYT 723
Query: 399 METPLFFAVKNDHMVCAEVLLRWGANSEVLNLRRERPI 436
+TPL A N H E LL GA E+ N R+ P+
Sbjct: 724 GDTPLHKAASNGHRKMVEFLLSRGATLEIRNDYRQTPL 761
Score = 131 (51.2 bits), Expect = 0.00015, P = 0.00015
Identities = 47/168 (27%), Positives = 82/168 (48%)
Query: 284 TDKKVGPPLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKTSMGLSQHIL 343
T K+ L LA G + ++++LL + N+ AL G H
Sbjct: 9 TPSKLEVALFLAATQGYDTIVKLLLSTPGVNLNCTDE----NNRTPIALAADEG---H-- 59
Query: 344 QNRIVGILLKHGAIV--SQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLKTIMMET 401
+N +V +LL++G++ SQ +K GLTAL AA G++ + L+ D +N+ +T
Sbjct: 60 EN-VVQLLLENGSVGLNSQDSKNGLTALCSAAKKGHTGVVRRLLESGAD-VNIPDSKGQT 117
Query: 402 PLFFAVKNDHMVCAEVLLRWGANSEVLNLRRERPIDFAKSQDMRFLLK 449
PL +AV+N H ++LL G+N + + P+ A S+ + ++K
Sbjct: 118 PLSWAVENGHQAVVQLLLGHGSNPNTPDPGGQTPLSCAVSKGNQEIVK 165
Score = 129 (50.5 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 47/163 (28%), Positives = 75/163 (46%)
Query: 284 TDK-KVGPPLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKTSMGLSQHI 342
TD+ K G PL A + G +V+ LLK ++L AL ++H
Sbjct: 550 TDRSKFGNPLFQAGRKGHLEVVRYLLKK---GADVNATNGENETSLLLALLNDR--TKH- 603
Query: 343 LQNRIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLKTIMMETP 402
++G++L+ GA V+ +K G T L IA + + + L+ + I+ T TP
Sbjct: 604 -GREVIGLILQKGADVNAADKSGQTPLDIATKQNDLELMNVLMEHGAE-IDSVTEEGATP 661
Query: 403 LFFAVKNDHMVCAEVLLRWGANSEVLNLRRERPIDFAKSQDMR 445
L A+ N+ AEVLL GA+ E + + P+ FA + R
Sbjct: 662 LHQAIINEREDIAEVLLEHGADPEAQDSHGDAPLHFAAASGRR 704
Score = 80 (33.2 bits), Expect = 8.9e-09, Sum P(2) = 8.9e-09
Identities = 17/40 (42%), Positives = 26/40 (65%)
Query: 89 EVEESSGMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
++ ++SG L LAAE+ V+LLLK +A+ D+R K G
Sbjct: 444 DLADNSGRVPLSLAAENGNHEIVQLLLKAKAKPDMRDKKG 483
Score = 54 (24.1 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 12/40 (30%), Positives = 19/40 (47%)
Query: 89 EVEESSGMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
+ + +G L A ES V L+K +A D+ +DG
Sbjct: 378 DAADITGRNPLSYAVESGHLEIVRFLIKAKANPDLADQDG 417
Score = 52 (23.4 bits), Expect = 6.7e-06, Sum P(2) = 6.7e-06
Identities = 19/54 (35%), Positives = 27/54 (50%)
Query: 76 LVNGDLGPVALVNEVEESSGMTALHLAAES-HTARCVELLLKKRARTDIRSKDG 128
L NG +G +N + +G+TAL AA+ HT V LL+ A +I G
Sbjct: 67 LENGSVG----LNSQDSKNGLTALCSAAKKGHTG-VVRRLLESGADVNIPDSKG 115
Score = 44 (20.5 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 12/33 (36%), Positives = 15/33 (45%)
Query: 90 VEESSGMTALHLAAESHTARCVELLLKKRARTD 122
V + +G L AAE LLL+ RA D
Sbjct: 346 VVDRNGRMPLSRAAEKENPEMTRLLLRARADPD 378
Score = 43 (20.2 bits), Expect = 5.5e-05, Sum P(2) = 5.5e-05
Identities = 16/42 (38%), Positives = 21/42 (50%)
Query: 74 TSLVNGDLGPVALVNEVEESSGMTALHLAAESHTARCVELLL 115
T +V L A VN + +S G T L A E+ V+LLL
Sbjct: 95 TGVVRRLLESGADVN-IPDSKGQTPLSWAVENGHQAVVQLLL 135
>UNIPROTKB|E1BAK6 [details] [associations]
symbol:DAZAP1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0005634 GO:GO:0005737 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 OMA:HNLDGRN GeneTree:ENSGT00700000104255
EMBL:DAAA02020260 IPI:IPI00701555 Ensembl:ENSBTAT00000026274
Uniprot:E1BAK6
Length = 396
Score = 165 (63.1 bits), Expect = 9.1e-09, P = 9.1e-09
Identities = 38/83 (45%), Positives = 51/83 (61%)
Query: 548 SKIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKHEKSAAA 607
+KIFVGG+P L YF+K FG + + V + EKQ RGFGF+TF+ E+S
Sbjct: 103 NKIFVGGIPHNCGETELREYFKK-FGVVTEV-VMIYDAEKQR-PRGFGFITFEDEQSVDQ 159
Query: 608 AVQARFVTIMGKEVEIKSAVPKE 630
AV F IMGK+VE+K A P++
Sbjct: 160 AVNMHFHDIMGKKVEVKRAEPRD 182
Score = 120 (47.3 bits), Expect = 0.00078, P = 0.00078
Identities = 27/81 (33%), Positives = 44/81 (54%)
Query: 549 KIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKHEKSAAAA 608
K+FVGGL + ++L YF + +G + D + + +T QS RGFGFV FK
Sbjct: 1 KLFVGGLDWSTTQETLRSYFSQ-YGEVVDCVIMKDKTTNQS--RGFGFVKFKDPNCVGTV 57
Query: 609 VQARFVTIMGKEVEIKSAVPK 629
+ +R T+ G+ ++ K P+
Sbjct: 58 LASRPHTLDGRNIDPKPCTPR 78
>UNIPROTKB|F1NTG9 [details] [associations]
symbol:DAZAP1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005634 GO:GO:0005737 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 OMA:HNLDGRN
GeneTree:ENSGT00700000104255 EMBL:AADN02058490 IPI:IPI00577519
Ensembl:ENSGALT00000024525 ArrayExpress:F1NTG9 Uniprot:F1NTG9
Length = 398
Score = 165 (63.1 bits), Expect = 9.2e-09, P = 9.2e-09
Identities = 38/83 (45%), Positives = 51/83 (61%)
Query: 548 SKIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKHEKSAAA 607
+KIFVGG+P L YF+K FG + + V + EKQ RGFGF+TF+ E+S
Sbjct: 103 NKIFVGGIPHNCGETELREYFKK-FGVVTEV-VMIYDAEKQR-PRGFGFITFEDEQSVDQ 159
Query: 608 AVQARFVTIMGKEVEIKSAVPKE 630
AV F IMGK+VE+K A P++
Sbjct: 160 AVNMHFHDIMGKKVEVKRAEPRD 182
Score = 122 (48.0 bits), Expect = 0.00048, P = 0.00048
Identities = 29/102 (28%), Positives = 53/102 (51%)
Query: 549 KIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKHEKSAAAA 608
K+FVGGL + ++L YF + +G + D + + +T QS RGFGFV FK
Sbjct: 1 KLFVGGLDWSTTQETLRSYFSQ-YGEVVDCVIMKDKTTNQS--RGFGFVKFKDPNCVGTV 57
Query: 609 VQARFVTIMGKEVEIKSAVPKEVLFAELQKQSAQQQESKHEH 650
+ +R T+ G+ ++ K P+ + + + Q+ S+ ++
Sbjct: 58 LASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGSRSDN 99
>RGD|1305280 [details] [associations]
symbol:Dazap1 "DAZ associated protein 1" species:10116 "Rattus
norvegicus" [GO:0001893 "maternal placenta development"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0007283 "spermatogenesis"
evidence=ISO] [GO:0008283 "cell proliferation" evidence=ISO]
[GO:0035613 "RNA stem-loop binding" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] [GO:0005844 "polysome" evidence=ISO]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 RGD:1305280 GO:GO:0005634 GO:GO:0005737 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 EMBL:CH474029 eggNOG:COG0724
CTD:26528 HOGENOM:HOG000234441 HOVERGEN:HBG002295 KO:K14411
OrthoDB:EOG40ZQXT OMA:GGYDMYN IPI:IPI00365961 EMBL:BC098930
RefSeq:NP_001020913.1 UniGene:Rn.16769 SMR:Q4KLZ3 GeneID:362836
KEGG:rno:362836 UCSC:RGD:1305280 InParanoid:Q4KLZ3 NextBio:681451
Genevestigator:Q4KLZ3 Uniprot:Q4KLZ3
Length = 405
Score = 165 (63.1 bits), Expect = 9.5e-09, P = 9.5e-09
Identities = 38/83 (45%), Positives = 51/83 (61%)
Query: 548 SKIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKHEKSAAA 607
+KIFVGG+P L YF+K FG + + V + EKQ RGFGF+TF+ E+S
Sbjct: 112 NKIFVGGIPHNCGETELREYFKK-FGVVTEV-VMIYDAEKQR-PRGFGFITFEDEQSVDQ 168
Query: 608 AVQARFVTIMGKEVEIKSAVPKE 630
AV F IMGK+VE+K A P++
Sbjct: 169 AVNMHFHDIMGKKVEVKRAEPRD 191
Score = 121 (47.7 bits), Expect = 0.00063, P = 0.00063
Identities = 30/92 (32%), Positives = 47/92 (51%)
Query: 538 MIHASTQEFKSKIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFV 597
M A E K+FVGGL + ++L YF + +G + D + + +T QS RGFGFV
Sbjct: 1 MNSAGADEI-GKLFVGGLDWSTTQETLRSYFSQ-YGEVVDCVIMKDKTTNQS--RGFGFV 56
Query: 598 TFKHEKSAAAAVQARFVTIMGKEVEIKSAVPK 629
FK + +R T+ G+ ++ K P+
Sbjct: 57 KFKDPNCVGTVLASRPHTLDGRNIDPKPCTPR 88
>MGI|MGI:1917498 [details] [associations]
symbol:Dazap1 "DAZ associated protein 1" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0001893 "maternal placenta development" evidence=IMP]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=ISA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005844 "polysome"
evidence=IDA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IMP]
[GO:0008283 "cell proliferation" evidence=IMP] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0035613 "RNA stem-loop binding"
evidence=IDA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 MGI:MGI:1917498 GO:GO:0007275
GO:GO:0005634 GO:GO:0005737 GO:GO:0030154 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0007283 GO:GO:0003723 eggNOG:COG0724
CTD:26528 HOGENOM:HOG000234441 HOVERGEN:HBG002295 KO:K14411
ChiTaRS:DAZAP1 EMBL:AF225910 EMBL:BC049355 IPI:IPI00406492
IPI:IPI00406493 RefSeq:NP_001116076.1 RefSeq:NP_001116077.1
RefSeq:NP_573451.2 UniGene:Mm.148693 ProteinModelPortal:Q9JII5
SMR:Q9JII5 STRING:Q9JII5 PhosphoSite:Q9JII5
REPRODUCTION-2DPAGE:Q9JII5 PaxDb:Q9JII5 PRIDE:Q9JII5
Ensembl:ENSMUST00000092305 Ensembl:ENSMUST00000105362 GeneID:70248
KEGG:mmu:70248 UCSC:uc007gcl.2 UCSC:uc007gcm.2
GeneTree:ENSGT00700000104255 InParanoid:Q9JII5 NextBio:331250
Bgee:Q9JII5 CleanEx:MM_DAZAP1 Genevestigator:Q9JII5
GermOnline:ENSMUSG00000069565 Uniprot:Q9JII5
Length = 406
Score = 165 (63.1 bits), Expect = 9.6e-09, P = 9.6e-09
Identities = 38/83 (45%), Positives = 51/83 (61%)
Query: 548 SKIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKHEKSAAA 607
+KIFVGG+P L YF+K FG + + V + EKQ RGFGF+TF+ E+S
Sbjct: 113 NKIFVGGIPHNCGETELREYFKK-FGVVTEV-VMIYDAEKQR-PRGFGFITFEDEQSVDQ 169
Query: 608 AVQARFVTIMGKEVEIKSAVPKE 630
AV F IMGK+VE+K A P++
Sbjct: 170 AVNMHFHDIMGKKVEVKRAEPRD 192
Score = 121 (47.7 bits), Expect = 0.00063, P = 0.00063
Identities = 30/92 (32%), Positives = 47/92 (51%)
Query: 538 MIHASTQEFKSKIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFV 597
M A E K+FVGGL + ++L YF + +G + D + + +T QS RGFGFV
Sbjct: 1 MNSAGADEI-GKLFVGGLDWSTTQETLRSYFSQ-YGEVVDCVIMKDKTTNQS--RGFGFV 56
Query: 598 TFKHEKSAAAAVQARFVTIMGKEVEIKSAVPK 629
FK + +R T+ G+ ++ K P+
Sbjct: 57 KFKDPNCVGTVLASRPHTLDGRNIDPKPCTPR 88
>UNIPROTKB|F2Z3S1 [details] [associations]
symbol:Dazap1 "Protein Dazap1" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
RGD:1305280 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00700000104255 IPI:IPI00365961
ProteinModelPortal:F2Z3S1 SMR:F2Z3S1 PRIDE:F2Z3S1
Ensembl:ENSRNOT00000046886 Uniprot:F2Z3S1
Length = 406
Score = 165 (63.1 bits), Expect = 9.6e-09, P = 9.6e-09
Identities = 38/83 (45%), Positives = 51/83 (61%)
Query: 548 SKIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKHEKSAAA 607
+KIFVGG+P L YF+K FG + + V + EKQ RGFGF+TF+ E+S
Sbjct: 113 NKIFVGGIPHNCGETELREYFKK-FGVVTEV-VMIYDAEKQR-PRGFGFITFEDEQSVDQ 169
Query: 608 AVQARFVTIMGKEVEIKSAVPKE 630
AV F IMGK+VE+K A P++
Sbjct: 170 AVNMHFHDIMGKKVEVKRAEPRD 192
Score = 121 (47.7 bits), Expect = 0.00063, P = 0.00063
Identities = 30/92 (32%), Positives = 47/92 (51%)
Query: 538 MIHASTQEFKSKIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFV 597
M A E K+FVGGL + ++L YF + +G + D + + +T QS RGFGFV
Sbjct: 1 MNSAGADEI-GKLFVGGLDWSTTQETLRSYFSQ-YGEVVDCVIMKDKTTNQS--RGFGFV 56
Query: 598 TFKHEKSAAAAVQARFVTIMGKEVEIKSAVPK 629
FK + +R T+ G+ ++ K P+
Sbjct: 57 KFKDPNCVGTVLASRPHTLDGRNIDPKPCTPR 88
>UNIPROTKB|I3LB68 [details] [associations]
symbol:DAZAP1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0005634 GO:GO:0005737 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 CTD:26528 KO:K14411 OMA:HNLDGRN
GeneTree:ENSGT00700000104255 EMBL:FP325262 RefSeq:NP_001231435.1
UniGene:Ssc.1299 Ensembl:ENSSSCT00000023438 GeneID:100625005
KEGG:ssc:100625005 Uniprot:I3LB68
Length = 406
Score = 165 (63.1 bits), Expect = 9.6e-09, P = 9.6e-09
Identities = 38/83 (45%), Positives = 51/83 (61%)
Query: 548 SKIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKHEKSAAA 607
+KIFVGG+P L YF+K FG + + V + EKQ RGFGF+TF+ E+S
Sbjct: 113 NKIFVGGIPHNCGETELREYFKK-FGVVTEV-VMIYDAEKQR-PRGFGFITFEDEQSVDQ 169
Query: 608 AVQARFVTIMGKEVEIKSAVPKE 630
AV F IMGK+VE+K A P++
Sbjct: 170 AVNMHFHDIMGKKVEVKRAEPRD 192
Score = 120 (47.3 bits), Expect = 0.00081, P = 0.00081
Identities = 27/81 (33%), Positives = 44/81 (54%)
Query: 549 KIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKHEKSAAAA 608
K+FVGGL + ++L YF + +G + D + + +T QS RGFGFV FK
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQ-YGEVVDCVIMKDKTTNQS--RGFGFVKFKDPNCVGTV 67
Query: 609 VQARFVTIMGKEVEIKSAVPK 629
+ +R T+ G+ ++ K P+
Sbjct: 68 LASRPHTLDGRNIDPKPCTPR 88
>UNIPROTKB|E2R6E4 [details] [associations]
symbol:DAZAP1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005634 GO:GO:0005737 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 CTD:26528 KO:K14411 OMA:HNLDGRN
GeneTree:ENSGT00700000104255 EMBL:AAEX03012650 EMBL:AAEX03012651
RefSeq:XP_003432858.1 Ensembl:ENSCAFT00000031038 GeneID:100683271
KEGG:cfa:100683271 Uniprot:E2R6E4
Length = 407
Score = 165 (63.1 bits), Expect = 9.6e-09, P = 9.6e-09
Identities = 38/83 (45%), Positives = 51/83 (61%)
Query: 548 SKIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKHEKSAAA 607
+KIFVGG+P L YF+K FG + + V + EKQ RGFGF+TF+ E+S
Sbjct: 113 NKIFVGGIPHNCGETELREYFKK-FGVVTEV-VMIYDAEKQR-PRGFGFITFEDEQSVDQ 169
Query: 608 AVQARFVTIMGKEVEIKSAVPKE 630
AV F IMGK+VE+K A P++
Sbjct: 170 AVNMHFHDIMGKKVEVKRAEPRD 192
Score = 120 (47.3 bits), Expect = 0.00082, P = 0.00082
Identities = 27/81 (33%), Positives = 44/81 (54%)
Query: 549 KIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKHEKSAAAA 608
K+FVGGL + ++L YF + +G + D + + +T QS RGFGFV FK
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQ-YGEVVDCVIMKDKTTNQS--RGFGFVKFKDPNCVGTV 67
Query: 609 VQARFVTIMGKEVEIKSAVPK 629
+ +R T+ G+ ++ K P+
Sbjct: 68 LASRPHTLDGRNIDPKPCTPR 88
>UNIPROTKB|Q96EP5 [details] [associations]
symbol:DAZAP1 "DAZ-associated protein 1" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0007275 GO:GO:0005634 GO:GO:0005737
GO:GO:0030154 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0007283
GO:GO:0003723 eggNOG:COG0724 EMBL:AF181719 EMBL:BC012062
EMBL:AK056850 IPI:IPI00165230 IPI:IPI00335930 RefSeq:NP_061832.2
RefSeq:NP_733829.1 UniGene:Hs.222510 PDB:2DGS PDB:2DH8 PDBsum:2DGS
PDBsum:2DH8 ProteinModelPortal:Q96EP5 SMR:Q96EP5 IntAct:Q96EP5
STRING:Q96EP5 PhosphoSite:Q96EP5 DMDM:44887869
REPRODUCTION-2DPAGE:IPI00165230 PaxDb:Q96EP5 PRIDE:Q96EP5
DNASU:26528 Ensembl:ENST00000233078 Ensembl:ENST00000336761
GeneID:26528 KEGG:hsa:26528 UCSC:uc002lsm.3 UCSC:uc002lsn.3
CTD:26528 GeneCards:GC19P001407 HGNC:HGNC:2683 HPA:HPA004201
HPA:HPA004631 MIM:607430 neXtProt:NX_Q96EP5 PharmGKB:PA27153
HOGENOM:HOG000234441 HOVERGEN:HBG002295 InParanoid:Q96EP5 KO:K14411
OMA:HNLDGRN OrthoDB:EOG40ZQXT PhylomeDB:Q96EP5 ChiTaRS:DAZAP1
EvolutionaryTrace:Q96EP5 GenomeRNAi:26528 NextBio:48864
ArrayExpress:Q96EP5 Bgee:Q96EP5 CleanEx:HS_DAZAP1
Genevestigator:Q96EP5 GermOnline:ENSG00000071626 Uniprot:Q96EP5
Length = 407
Score = 165 (63.1 bits), Expect = 9.6e-09, P = 9.6e-09
Identities = 38/83 (45%), Positives = 51/83 (61%)
Query: 548 SKIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKHEKSAAA 607
+KIFVGG+P L YF+K FG + + V + EKQ RGFGF+TF+ E+S
Sbjct: 113 NKIFVGGIPHNCGETELREYFKK-FGVVTEV-VMIYDAEKQR-PRGFGFITFEDEQSVDQ 169
Query: 608 AVQARFVTIMGKEVEIKSAVPKE 630
AV F IMGK+VE+K A P++
Sbjct: 170 AVNMHFHDIMGKKVEVKRAEPRD 192
Score = 120 (47.3 bits), Expect = 0.00082, P = 0.00082
Identities = 27/81 (33%), Positives = 44/81 (54%)
Query: 549 KIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKHEKSAAAA 608
K+FVGGL + ++L YF + +G + D + + +T QS RGFGFV FK
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQ-YGEVVDCVIMKDKTTNQS--RGFGFVKFKDPNCVGTV 67
Query: 609 VQARFVTIMGKEVEIKSAVPK 629
+ +R T+ G+ ++ K P+
Sbjct: 68 LASRPHTLDGRNIDPKPCTPR 88
>TAIR|locus:2050992 [details] [associations]
symbol:AT2G33410 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
EMBL:CP002685 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
EMBL:AC002332 HOGENOM:HOG000234441 KO:K14411 HSSP:Q61474
ProtClustDB:CLSN2913105 OMA:GNDSSYG EMBL:AY136298 EMBL:BT000416
IPI:IPI00531202 PIR:B84745 RefSeq:NP_180899.1 UniGene:At.22217
ProteinModelPortal:O22791 SMR:O22791 IntAct:O22791 STRING:O22791
PRIDE:O22791 ProMEX:O22791 EnsemblPlants:AT2G33410.1 GeneID:817905
KEGG:ath:AT2G33410 TAIR:At2g33410 InParanoid:O22791
PhylomeDB:O22791 ArrayExpress:O22791 Genevestigator:O22791
Uniprot:O22791
Length = 404
Score = 168 (64.2 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 38/82 (46%), Positives = 50/82 (60%)
Query: 549 KIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKHEKSAAAA 608
KIFVGGLP L SD YFE +GP+ DA + QT ++ RGFGFV+F E S
Sbjct: 111 KIFVGGLPPALTSDEFRAYFET-YGPVSDAVIMIDQTTQRP--RGFGFVSFDSEDSVDLV 167
Query: 609 VQARFVTIMGKEVEIKSAVPKE 630
+ F + GK+VE+K A+PK+
Sbjct: 168 LHKTFHDLNGKQVEVKRALPKD 189
Score = 42 (19.8 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 11/37 (29%), Positives = 16/37 (43%)
Query: 798 AGPIGKNGSPNHMVLVPSPPKQKWGALQLSKNGNPSS 834
A P G +G P V+ + +G+ GN SS
Sbjct: 307 AAPWGGSGGPGSAVMGQAGASAGYGSQGYGYGGNDSS 343
Score = 38 (18.4 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 8/17 (47%), Positives = 9/17 (52%)
Query: 815 SPPKQKWGALQLSKNGN 831
S P+ WGA S GN
Sbjct: 285 SGPRSSWGAQAPSGYGN 301
>UNIPROTKB|Q98SJ2 [details] [associations]
symbol:dazap1 "DAZ-associated protein 1" species:8355
"Xenopus laevis" [GO:0003723 "RNA binding" evidence=IDA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0007275 GO:GO:0005737 GO:GO:0030154
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0048477 GO:GO:0003723
CTD:26528 HOVERGEN:HBG002295 KO:K14411 EMBL:AY028920
RefSeq:NP_001082088.1 UniGene:Xl.1666 ProteinModelPortal:Q98SJ2
SMR:Q98SJ2 GeneID:398218 KEGG:xla:398218 Xenbase:XB-GENE-864805
Uniprot:Q98SJ2
Length = 360
Score = 162 (62.1 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 39/89 (43%), Positives = 53/89 (59%)
Query: 543 TQEFKS-KIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKH 601
T+ +S KIFVGG+P L YF + FG + + V + EKQ RGFGF+TF+
Sbjct: 108 TENSRSNKIFVGGIPHNCGETELKEYFNR-FGVVTEV-VMIYDAEKQR-PRGFGFITFED 164
Query: 602 EKSAAAAVQARFVTIMGKEVEIKSAVPKE 630
E+S AV F IMGK+VE+K A P++
Sbjct: 165 EQSVDQAVNMHFHDIMGKKVEVKRAEPRD 193
Score = 124 (48.7 bits), Expect = 0.00024, P = 0.00024
Identities = 31/103 (30%), Positives = 55/103 (53%)
Query: 549 KIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKHEKSAAAA 608
K+FVGGL + ++L YF + +G + D + + +T QS RGFGFV FK
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQ-YGEVVDCVIMKDKTTNQS--RGFGFVKFKDPNCVGTV 67
Query: 609 VQARFVTIMGKEVEIKSAVPKEVLFAELQ-KQSAQQQESKHEH 650
+ +R T+ G+ ++ K P+ + + ++ QQ+E + E+
Sbjct: 68 LASRPHTLDGRNIDPKPCTPRGMQPERSRPREGWQQKEPRTEN 110
>MGI|MGI:3045243 [details] [associations]
symbol:Ankrd44 "ankyrin repeat domain 44" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002110 Pfam:PF00023 PRINTS:PR01415
PROSITE:PS50088 SMART:SM00248 MGI:MGI:3045243 eggNOG:COG0666
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 HOGENOM:HOG000033959 HOVERGEN:HBG067697
OrthoDB:EOG4NCMCR GeneTree:ENSGT00700000104124 CTD:91526 KO:K15503
ChiTaRS:ANKRD44 EMBL:BC157918 EMBL:BC157951 EMBL:BC172102
IPI:IPI00755796 RefSeq:NP_001074902.2 UniGene:Mm.397910
ProteinModelPortal:B2RXR6 SMR:B2RXR6 PhosphoSite:B2RXR6
PaxDb:B2RXR6 PRIDE:B2RXR6 Ensembl:ENSMUST00000179030 GeneID:329154
KEGG:mmu:329154 UCSC:uc011wkz.1 InParanoid:B2RXN6 NextBio:398597
Bgee:B2RXR6 Genevestigator:B2RXR6 Uniprot:B2RXR6
Length = 993
Score = 131 (51.2 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 64/264 (24%), Positives = 100/264 (37%)
Query: 279 ANGSCTDKKVGPPLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKTSMGL 338
A +C DKK PL A G V++ LL GN+ALH A
Sbjct: 197 AEVTCKDKKGYTPLHAAASNGQISVVKHLLN---LGVEIDEINVYGNTALHIACYNG--- 250
Query: 339 SQHILQNRIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQ-ALEDLIRKEPDCINLKTI 397
Q+ +V L+ +GA V+Q N G T LH AA S + LE L+ D +N+++
Sbjct: 251 -----QDAVVNELIDYGANVNQPNNSGFTPLHFAAASTHGALCLELLVNNGAD-VNIQSK 304
Query: 398 MMETPLFFAVKNDHMVCAEVLLRWGANSEVLNLRRERPIDFAKSQDMRFLLKAANTCHTN 457
++PL + ++ L++ G + ++ P+ A L+ T +
Sbjct: 305 DGKSPLHMTAVHGRFTRSQTLIQNGGEIDCVDKDGNTPLHVAARHGHELLINTLITSGAD 364
Query: 458 LAFLNQEKQ-NASLESDEDISGTCEALLSMVDDNSNTERICSGTKIEVCKYYESHSGCIR 516
A L + S C LLS S E T C + + G +
Sbjct: 365 TAKCGIHSMFPLHLAALNAHSDCCRKLLS-----SGFEIDTPDTFGRTCLHAAAAGGNVE 419
Query: 517 GSKCFYALGEEQHRKMNPGMCMIH 540
K + G + H+K G +H
Sbjct: 420 CIKLLQSSGADFHKKDKCGRTPLH 443
Score = 122 (48.0 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 55/205 (26%), Positives = 95/205 (46%)
Query: 279 ANGSCTDKKVGPPLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKTSMGL 338
AN S DK+ + A G +E+LL+ G ALK+ + L
Sbjct: 523 ANPSIRDKEGYNSIHYAAAYGHRQCLELLLER----TNTGFEESDGG-----ALKSPLHL 573
Query: 339 SQHILQNRIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLKTIM 398
+ + ++ + +LL+ + +++ G TAL++AA G+++ +E L+ + +
Sbjct: 574 AAYNGHHQALEVLLQSLVDLDIRDEKGRTALYLAAFKGHTECVEALVNQGASIFVKDNVT 633
Query: 399 METPLFFAVKNDHMVCAEVLLRWGANSEVLNLRRERPIDFAKSQDMRFLLKAANTCHTNL 458
TPL +V N H +C +LL N EV++++ D AK Q L A H +
Sbjct: 634 KRTPLHASVINGHTLCLRLLLETADNPEVVDVK-----D-AKGQTPLMLAVAYG--HIDA 685
Query: 459 AFLNQEKQNASLESDEDISGTCEAL 483
L EK+ A++++ DI G C AL
Sbjct: 686 VSLLLEKE-ANVDA-VDIVG-CTAL 707
Score = 116 (45.9 bits), Expect = 8.0e-08, Sum P(2) = 8.0e-08
Identities = 60/242 (24%), Positives = 92/242 (38%)
Query: 278 VANGS---CTDKKVGPPLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKT 334
+ NG C DK PL +A + G E +I L+ S LH A
Sbjct: 326 IQNGGEIDCVDKDGNTPLHVAARHGHELLINTLITSGADTAKCGIHSMF---PLHLA--- 379
Query: 335 SMGLSQHILQNRIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINL 394
L+ H + LL G + + G T LH AA GN + ++ L++ +
Sbjct: 380 --ALNAH---SDCCRKLLSSGFEIDTPDTFGRTCLHAAAAGGNVECIK-LLQSSGADFHK 433
Query: 395 KTIMMETPLFFAVKNDHMVCAEVLLRWGANSEVLNLRRERPIDFAKSQDMRFLLKAANTC 454
K TPL +A N H C + L+ GAN + + +A + DM
Sbjct: 434 KDKCGRTPLHYAAANCHFHCIKALVTTGANVNETDDWGRTALHYAAASDMDRNKMILGNA 493
Query: 455 HTNLAFLNQEKQNASLESDEDISGTCEALLSMVDDNSNTERICSG-TKIEVCKYYESHSG 513
H N ++E + A ++D + E LL +D + + R G I Y H
Sbjct: 494 HDN----SEELERAREVKEKDAALCLEFLLQ--NDANPSIRDKEGYNSIHYAAAY-GHRQ 546
Query: 514 CI 515
C+
Sbjct: 547 CL 548
Score = 108 (43.1 bits), Expect = 5.6e-07, Sum P(2) = 5.6e-07
Identities = 44/173 (25%), Positives = 76/173 (43%)
Query: 283 CTDKKVG-P--PLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKTSMGLS 339
C K +G P PL A G E +LL + G + LH A + G
Sbjct: 796 CFRKFIGNPFTPLHCAIINGHESCASLLLGA-IDPSIVSCRDDKGRTTLHAA---AFGDH 851
Query: 340 QHILQNRIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLKTIMM 399
LQ +LL+H A V+ + G TAL +AA +G + A++ L+ + +K +
Sbjct: 852 AECLQ-----LLLRHDAQVNAVDNSGKTALMMAAENGQAGAVDILVNSAQADLTVKDKDL 906
Query: 400 ETPLFFAVKNDHMVCAEVLLRWGANSEVLNLRR---ERPIDFAKSQDMRFLLK 449
TPL A+ H CA ++L + ++N + + P+ A ++ +++
Sbjct: 907 NTPLHLAISKGHEKCALLILDKIQDESLINAKNSALQTPLHIAARNGLKVVVE 959
Score = 99 (39.9 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 33/95 (34%), Positives = 49/95 (51%)
Query: 35 INVSKRHFIDNSLDNADQQTAIVTKLLRVSCIFDSVSCATSLVNGDLGPVALVNEVEESS 94
I+V K H ++ ++ D+ L ++C + L+ D G A VN+ +S
Sbjct: 219 ISVVK-HLLNLGVE-IDEINVYGNTALHIACYNGQDAVVNELI--DYG--ANVNQ-PNNS 271
Query: 95 GMTALHLAAES-HTARCVELLLKKRARTDIRSKDG 128
G T LH AA S H A C+ELL+ A +I+SKDG
Sbjct: 272 GFTPLHFAAASTHGALCLELLVNNGADVNIQSKDG 306
Score = 88 (36.0 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 37/137 (27%), Positives = 62/137 (45%)
Query: 299 GDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKTSMGLSQHILQNRIVGILLKHGAIV 358
G E+ +++LL+ + G + LH A + G + + N ++ I L
Sbjct: 714 GHEECVQMLLEQEASILCKDSR---GRTPLHYA--AARGHATWL--NELLQIALSEEDCC 766
Query: 359 SQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLKTIMMETPLFFAVKNDHMVCAEVL 418
+ N+ G T LH A +GN +E L+ E C TPL A+ N H CA +L
Sbjct: 767 LKDNQ-GYTPLHWACYNGNENCIEVLL--EQKCFRKFIGNPFTPLHCAIINGHESCASLL 823
Query: 419 LRWGA-NSEVLNLRRER 434
L GA + +++ R ++
Sbjct: 824 L--GAIDPSIVSCRDDK 838
Score = 85 (35.0 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 39/148 (26%), Positives = 69/148 (46%)
Query: 277 AVANGSCT--DKKVGPPLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGN--SALHCAL 332
A++ C D + PL A G+E+ IE+LL+ K GN + LHCA+
Sbjct: 759 ALSEEDCCLKDNQGYTPLHWACYNGNENCIEVLLEQKCFRKFI------GNPFTPLHCAI 812
Query: 333 KTSMGLSQH-ILQNRIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDC 391
++ H + ++G + +IVS ++ G T LH AA +++ L+ L+R +
Sbjct: 813 -----INGHESCASLLLGAI--DPSIVSCRDDKGRTTLHAAAFGDHAECLQLLLRHDAQ- 864
Query: 392 INLKTIMMETPLFFAVKNDHMVCAEVLL 419
+N +T L A +N ++L+
Sbjct: 865 VNAVDNSGKTALMMAAENGQAGAVDILV 892
Score = 83 (34.3 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 40/145 (27%), Positives = 61/145 (42%)
Query: 282 SCTDKKVGPPLILATQAGDE-DVIEILLKSKXXXXXXXXXXXXGNSALHCALKTSMGLSQ 340
SC D K G + A GD + +++LL+ G +AL A + +
Sbjct: 833 SCRDDK-GRTTLHAAAFGDHAECLQLLLRHDAQVNAVDNS---GKTALMMAAENGQAGAV 888
Query: 341 HILQNRIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPD--CINLKTIM 398
IL N A ++ ++K T LH+A G+ + ++ K D IN K
Sbjct: 889 DILVNSAQ-------ADLTVKDKDLNTPLHLAISKGHEKCALLILDKIQDESLINAKNSA 941
Query: 399 METPLFFAVKNDHMVCAEVLLRWGA 423
++TPL A +N V E LL GA
Sbjct: 942 LQTPLHIAARNGLKVVVEELLAKGA 966
Score = 71 (30.1 bits), Expect = 0.00041, Sum P(2) = 0.00040
Identities = 18/61 (29%), Positives = 27/61 (44%)
Query: 68 DSVSCATSLVNGDLGPVALVNEVEESSGMTALHLAAESHTARCVELLLKKRARTDIRSKD 127
D+ C L+ D P + + G ++H AA +C+ELLL+ R T D
Sbjct: 510 DAALCLEFLLQNDANP-----SIRDKEGYNSIHYAAAYGHRQCLELLLE-RTNTGFEESD 563
Query: 128 G 128
G
Sbjct: 564 G 564
Score = 61 (26.5 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 26/95 (27%), Positives = 41/95 (43%)
Query: 32 KQLINVSKRHFIDNSLDNADQQTAIVTKLLRVSCIFDSVSCATSLVNGDLGPVALVNEVE 91
++ + V +H D + + + QT L V+ +V CA ++ P+ V
Sbjct: 87 EEAVQVLIKHSADVNARDKNWQTP-----LHVAAANKAVKCAEVII-----PLLSSVNVS 136
Query: 92 ESSGMTALHLAAESHTARCVELLLKKRARTDIRSK 126
+ G TALH AA + V LLL K A + K
Sbjct: 137 DRGGRTALHHAALNGHMEMVNLLLAKGANINAFDK 171
Score = 58 (25.5 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 15/49 (30%), Positives = 21/49 (42%)
Query: 80 DLGPVALVNEVEESSGMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
D + L N + S + E A C+E LL+ A IR K+G
Sbjct: 484 DRNKMILGNAHDNSEELERAREVKEKDAALCLEFLLQNDANPSIRDKEG 532
Score = 56 (24.8 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 85 ALVNEVEESSGMTALHLAAESHTARCVELLLKKRARTDIRSKD 127
A VN +++ +T LH A S + V++L+K A + R K+
Sbjct: 65 ARVN-AKDNMWLTPLHRAVASRSEEAVQVLIKHSADVNARDKN 106
Score = 55 (24.4 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 13/39 (33%), Positives = 18/39 (46%)
Query: 89 EVEESSGMTALHLAAESHTARCVELLLKKRARTDIRSKD 127
+ ++ G T LH AA C++LL A D KD
Sbjct: 399 DTPDTFGRTCLHAAAAGGNVECIKLLQSSGA--DFHKKD 435
>DICTYBASE|DDB_G0292422 [details] [associations]
symbol:DDB_G0292422 "RNA-binding region RNP-1
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 dictyBase:DDB_G0292422 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AAFI02000190 KO:K14411
eggNOG:NOG289504 RefSeq:XP_629598.1 ProteinModelPortal:Q54D98
EnsemblProtists:DDB0233639 GeneID:8628658 KEGG:ddi:DDB_G0292422
InParanoid:Q54D98 OMA:YYEDESS Uniprot:Q54D98
Length = 687
Score = 160 (61.4 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 40/105 (38%), Positives = 56/105 (53%)
Query: 547 KSKIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKHEKSAA 606
K K+FVGGLP + SD YF + FG I + + TEK +GFGF+ FK E
Sbjct: 193 KQKLFVGGLPKHITSDDFNNYFSE-FGEISEYNLL---TEKNGTIKGFGFICFKDESVNE 248
Query: 607 AAVQARFVTIMGKEVEIKSAVPKEVLFAELQKQSAQQQESKHEHQ 651
+ + I+GK V+I+ A + LQ+Q QQQ+ +H HQ
Sbjct: 249 IILNEQQHIILGKRVDIRIADSQN---KRLQQQQ-QQQQQQHPHQ 289
Score = 149 (57.5 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 41/96 (42%), Positives = 56/96 (58%)
Query: 544 QEFKSKIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKHEK 603
+ KIFVGGL ++ L YF +FG ++++ V + TEK S SRGFGFVTF +
Sbjct: 102 KSISGKIFVGGLLKTSSNEILKDYFS-NFGEVKESIVIK-ATEKASKSRGFGFVTFV-DP 158
Query: 604 SAAAAVQARFVTIMGKEVEIKSAVPKEVLFAELQKQ 639
S V +I GK VEI+ A+PKE + E +KQ
Sbjct: 159 SVIDEVILINHSIEGKNVEIRRAIPKEEMTEEPKKQ 194
Score = 54 (24.1 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 16/59 (27%), Positives = 29/59 (49%)
Query: 807 PNHMVLVPSPPKQ--KWGALQLSKNGNPSSPVNSASDSNECDRNDSKSPQDLRSVSISS 863
P+H L PS + + + + +P SPVN + +N C+ N+S + ++ SS
Sbjct: 325 PHHHQLSPSHLNNGNQASSNSIPPSNSPGSPVNEMNYNN-CNNNNSNGNRTTGTIISSS 382
Score = 49 (22.3 bits), Expect = 9.3e-08, Sum P(2) = 9.3e-08
Identities = 14/62 (22%), Positives = 33/62 (53%)
Query: 825 QLSKN-GNPSSPVNSASDSNECDRNDSKSPQDLRSVSISSTIERKPTNEVPKGSSSQRDT 883
Q SK N ++ +N+ +++N + N++ + + ISS+I +N + ++ Q +
Sbjct: 486 QSSKYYNNNNTNINNNNNNNN-NNNNNNNNNKINDFQISSSIPPTYSNSIHNNNNIQTSS 544
Query: 884 ST 885
S+
Sbjct: 545 SS 546
Score = 43 (20.2 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 9/48 (18%), Positives = 24/48 (50%)
Query: 827 SKNGNPSSPVNSASDSNECDRNDSKSPQDLRSVSISSTIERKPTNEVP 874
+ N N ++ +N+ +++N + N S + + V+ ++I + P
Sbjct: 623 NNNNNNNNNINNNNNNNNNNNNGSSTEKSNEQVTSQNSISPSSSYSSP 670
>DICTYBASE|DDB_G0289189 [details] [associations]
symbol:psmD10 "26S proteasome non-ATPase regulatory
subunit 10" species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR002110 Pfam:PF00023 PRINTS:PR01415
PROSITE:PS50088 SMART:SM00248 dictyBase:DDB_G0289189 eggNOG:COG0666
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GenomeReviews:CM000154_GR EMBL:AAFI02000131
KO:K06694 HSSP:O75832 RefSeq:XP_636328.1 ProteinModelPortal:Q54HW1
STRING:Q54HW1 EnsemblProtists:DDB0232993 GeneID:8627001
KEGG:ddi:DDB_G0289189 OMA:DDAMAVH ProtClustDB:CLSZ2728813
Uniprot:Q54HW1
Length = 232
Score = 152 (58.6 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 48/159 (30%), Positives = 81/159 (50%)
Query: 291 PLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKTSMGLSQHILQNRIVGI 350
PL AT AG ++++LL+ + LH A +S G S IV +
Sbjct: 83 PLTSATSAGHTHMVKLLLE---FGADPNTVNDSKRTPLHYA--SSKGRSD------IVDL 131
Query: 351 LLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLKTIMMETPLFFAVKND 410
LL HGA ++++ G +H A+ +G+ +E L++ E + IN +TPL A + +
Sbjct: 132 LLTHGA-KNRKDDTGSAPIHRASSNGSVATVERLLKGEAN-INSTNNEGDTPLHIAAEYN 189
Query: 411 HMVCAEVLLRWGANSEVLNLRRERPIDFAKSQDMRFLLK 449
H E LL+ GA++ + N + PID + SQ +++L+K
Sbjct: 190 HEDVVECLLKHGADTTIENKDSKTPIDMSSSQTIKYLIK 228
>UNIPROTKB|Q8N8A2 [details] [associations]
symbol:ANKRD44 "Serine/threonine-protein phosphatase 6
regulatory ankyrin repeat subunit B" species:9606 "Homo sapiens"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR002110
Pfam:PF00023 PRINTS:PR01415 PROSITE:PS50088 SMART:SM00248
eggNOG:COG0666 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 HOGENOM:HOG000033959
HOVERGEN:HBG067697 EMBL:AK097086 EMBL:AC010746 EMBL:AC013264
EMBL:AC017035 EMBL:AW629326 EMBL:BC016985 EMBL:BC050586
EMBL:BC063622 EMBL:AL133087 IPI:IPI00167419 IPI:IPI00395999
IPI:IPI00477624 IPI:IPI00761054 IPI:IPI00915264 PIR:T42691
RefSeq:NP_001182073.1 RefSeq:NP_710181.2 UniGene:Hs.432706
ProteinModelPortal:Q8N8A2 SMR:Q8N8A2 IntAct:Q8N8A2 STRING:Q8N8A2
PhosphoSite:Q8N8A2 DMDM:218512105 PaxDb:Q8N8A2 PRIDE:Q8N8A2
DNASU:91526 Ensembl:ENST00000328737 Ensembl:ENST00000409153
Ensembl:ENST00000409919 Ensembl:ENST00000450567 GeneID:91526
KEGG:hsa:91526 UCSC:uc002utz.4 UCSC:uc002uub.3 UCSC:uc002uuc.3
UCSC:uc021vuj.1 CTD:91526 GeneCards:GC02M197832 HGNC:HGNC:25259
HPA:HPA030122 neXtProt:NX_Q8N8A2 PharmGKB:PA142672611 KO:K15503
ChiTaRS:ANKRD44 GenomeRNAi:91526 NextBio:77280 ArrayExpress:Q8N8A2
Bgee:Q8N8A2 CleanEx:HS_ANKRD44 Genevestigator:Q8N8A2
GermOnline:ENSG00000065413 Uniprot:Q8N8A2
Length = 993
Score = 128 (50.1 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 62/264 (23%), Positives = 102/264 (38%)
Query: 279 ANGSCTDKKVGPPLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKTSMGL 338
A +C DKK PL A G +V++ LL GN+ALH A
Sbjct: 197 AEVTCKDKKGYTPLHAAASNGQINVVKHLLN---LGVEIDEINVYGNTALHIACYNG--- 250
Query: 339 SQHILQNRIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQ-ALEDLIRKEPDCINLKTI 397
Q+ +V L+ +GA V+Q N G T LH AA S + LE L+ D +N+++
Sbjct: 251 -----QDAVVNELIDYGANVNQPNNNGFTPLHFAAASTHGALCLELLVNNGAD-VNIQSK 304
Query: 398 MMETPLFFAVKNDHMVCAEVLLRWGANSEVLNLRRERPIDFAKSQDMRFLLKAANTCHTN 457
++PL + ++ L++ G + ++ P+ A L+ T +
Sbjct: 305 DGKSPLHMTAVHGRFTRSQTLIQNGGEIDCVDKDGNTPLHVAARYGHELLINTLITSGAD 364
Query: 458 LAFLNQEKQ-NASLESDEDISGTCEALLSMVDDNSNTERICSGTKIEVCKYYESHSGCIR 516
A L + S C LLS + ++ G C + + G +
Sbjct: 365 TAKCGIHSMFPLHLAALNAHSDCCRKLLSSGFEIDTPDKF--G---RTCLHAAAAGGNVE 419
Query: 517 GSKCFYALGEEQHRKMNPGMCMIH 540
K + G + H+K G +H
Sbjct: 420 CIKLLQSSGADFHKKDKCGRTPLH 443
Score = 123 (48.4 bits), Expect = 6.7e-08, Sum P(3) = 6.7e-08
Identities = 61/241 (25%), Positives = 88/241 (36%)
Query: 278 VANGS---CTDKKVGPPLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKT 334
+ NG C DK PL +A + G E +I L+ S LH A
Sbjct: 326 IQNGGEIDCVDKDGNTPLHVAARYGHELLINTLITSGADTAKCGIHSMF---PLHLA--- 379
Query: 335 SMGLSQHILQNRIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINL 394
L+ H + LL G + +K G T LH AA GN + ++ L++ +
Sbjct: 380 --ALNAH---SDCCRKLLSSGFEIDTPDKFGRTCLHAAAAGGNVECIK-LLQSSGADFHK 433
Query: 395 KTIMMETPLFFAVKNDHMVCAEVLLRWGANSEVLNLRRERPIDFAKSQDMRFLLKAANTC 454
K TPL +A N H C E L+ GAN + + +A + DM
Sbjct: 434 KDKCGRTPLHYAAANCHFHCIETLVTTGANVNETDDWGRTALHYAAASDMDRNKTILGNA 493
Query: 455 HTNLAFLNQEKQNASLESDEDISGTCEALLSMVDDNSNTERICSGTKIEVCKYYESHSGC 514
H N ++E + A E E + C L D N + I Y H C
Sbjct: 494 HDN----SEELERAR-ELKEKEATLCLEFLLQNDANPSIRDKEGYNSIHYAAAY-GHRQC 547
Query: 515 I 515
+
Sbjct: 548 L 548
Score = 114 (45.2 bits), Expect = 5.8e-07, Sum P(3) = 5.8e-07
Identities = 55/205 (26%), Positives = 91/205 (44%)
Query: 279 ANGSCTDKKVGPPLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKTSMGL 338
AN S DK+ + A G +E+LL+ + S LH A
Sbjct: 523 ANPSIRDKEGYNSIHYAAAYGHRQCLELLLE-RTNSGFEESDSGATKSPLHLA-----AY 576
Query: 339 SQHILQNRIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLKTIM 398
+ H ++ + +LL+ + +++ G TAL +AA G+++ +E LI + +
Sbjct: 577 NGH---HQALEVLLQSLVDLDIRDEKGRTALDLAAFKGHTECVEALINQGASIFVKDNVT 633
Query: 399 METPLFFAVKNDHMVCAEVLLRWGANSEVLNLRRERPIDFAKSQDMRFLLKAANTCHTNL 458
TPL +V N H +C +LL N E ++++ D AK Q L A H +
Sbjct: 634 KRTPLHASVINGHTLCLRLLLEIADNPEAVDVK-----D-AKGQTPLMLAVAYG--HIDA 685
Query: 459 AFLNQEKQNASLESDEDISGTCEAL 483
L EK+ A++++ DI G C AL
Sbjct: 686 VSLLLEKE-ANVDT-VDILG-CTAL 707
Score = 110 (43.8 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 74/384 (19%), Positives = 138/384 (35%)
Query: 85 ALVN-EVEESSGMTALHLAA-ESHTARCVELLLKKRARTDI------RSKDGXXXXXXXX 136
+LV+ ++ + G TAL LAA + HT CVE L+ + A + R+
Sbjct: 589 SLVDLDIRDEKGRTALDLAAFKGHT-ECVEALINQGASIFVKDNVTKRTPLHASVINGHT 647
Query: 137 XXXXXXMDVIWNPDEYSVED------LVVILGQKNLTTVKLLSQKTKELDEVAYANXXXX 190
+++ NP+ V+D L++ + ++ V LL +K +D V
Sbjct: 648 LCLRLLLEIADNPEAVDVKDAKGQTPLMLAVAYGHIDAVSLLLEKEANVDTVDILGCTAL 707
Query: 191 XXXXXXXXXXXXXDKVNESILVLHDSDLGAKEKTTIYECVIREALALGRATKLQRAVKRN 250
+ + + +L G +T ++ R A + LQ A+
Sbjct: 708 HRGIMTGHEECVQMLLEQEVSILCKDSRG---RTPLHYAAAR-GHATWLSELLQMALSEE 763
Query: 251 STPTTSQSAEKRKXXXXXXXXXXXFGAVANGSCTDKKVGPPL--ILATQAGDEDVIEILL 308
+ C K +G P + D LL
Sbjct: 764 DCCFKDNQGYTPLHWACYNGNENCIEVLLEQKCFRKFIGNPFTPLHCAIINDHGNCASLL 823
Query: 309 KSKXXXXXXXXXXXXGNSALHCALKTSMGLSQHILQNRIVGILLKHGAIVSQQNKLGLTA 368
G + LH A + H+ + +LL+H A V+ + G TA
Sbjct: 824 LGAIDSSIVSCRDDKGRTPLHAA-----AFADHV---ECLQLLLRHSAPVNAVDNSGKTA 875
Query: 369 LHIAAGSGNSQALEDLIRKEPDCINLKTIMMETPLFFAVKNDHMVCAEVLLRWGANSEVL 428
L +AA +G + A++ L+ + +K + TPL A H CA ++L + ++
Sbjct: 876 LMMAAENGQAGAVDILVNSAQADLTVKDKDLNTPLHLACSKGHEKCALLILDKIQDESLI 935
Query: 429 NLRR---ERPIDFAKSQDMRFLLK 449
N + + P+ A ++ +++
Sbjct: 936 NEKNNALQTPLHVAARNGLKVVVE 959
Score = 101 (40.6 bits), Expect = 6.7e-08, Sum P(3) = 6.7e-08
Identities = 33/95 (34%), Positives = 49/95 (51%)
Query: 35 INVSKRHFIDNSLDNADQQTAIVTKLLRVSCIFDSVSCATSLVNGDLGPVALVNEVEESS 94
INV K H ++ ++ D+ L ++C + L+ D G A VN+ ++
Sbjct: 219 INVVK-HLLNLGVE-IDEINVYGNTALHIACYNGQDAVVNELI--DYG--ANVNQ-PNNN 271
Query: 95 GMTALHLAAES-HTARCVELLLKKRARTDIRSKDG 128
G T LH AA S H A C+ELL+ A +I+SKDG
Sbjct: 272 GFTPLHFAAASTHGALCLELLVNNGADVNIQSKDG 306
Score = 87 (35.7 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 42/152 (27%), Positives = 64/152 (42%)
Query: 276 GAVANG--SCTDKKVGPPLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALK 333
GA+ + SC D K PL A A + +++LL+ G +AL A +
Sbjct: 825 GAIDSSIVSCRDDKGRTPLHAAAFADHVECLQLLLRHSAPVNAVDNS---GKTALMMAAE 881
Query: 334 TSMGLSQHILQNRIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPD--C 391
+ IL N A ++ ++K T LH+A G+ + ++ K D
Sbjct: 882 NGQAGAVDILVNSAQ-------ADLTVKDKDLNTPLHLACSKGHEKCALLILDKIQDESL 934
Query: 392 INLKTIMMETPLFFAVKNDHMVCAEVLLRWGA 423
IN K ++TPL A +N V E LL GA
Sbjct: 935 INEKNNALQTPLHVAARNGLKVVVEELLAKGA 966
Score = 62 (26.9 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 26/95 (27%), Positives = 41/95 (43%)
Query: 32 KQLINVSKRHFIDNSLDNADQQTAIVTKLLRVSCIFDSVSCATSLVNGDLGPVALVNEVE 91
++ + V +H D + + + QT L V+ +V CA ++ P+ V
Sbjct: 87 EEAVQVLIKHSADVNARDKNWQTP-----LHVAAANKAVKCAEVII-----PLLSSVNVS 136
Query: 92 ESSGMTALHLAAESHTARCVELLLKKRARTDIRSK 126
+ G TALH AA + V LLL K A + K
Sbjct: 137 DRGGRTALHHAALNGHVEMVNLLLAKGANINAFDK 171
Score = 56 (24.8 bits), Expect = 0.00059, Sum P(3) = 0.00059
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 85 ALVNEVEESSGMTALHLAAESHTARCVELLLKKRARTDIRSKD 127
A VN +++ +T LH A S + V++L+K A + R K+
Sbjct: 65 ARVN-AKDNMWLTPLHRAVASRSEEAVQVLIKHSADVNARDKN 106
Score = 38 (18.4 bits), Expect = 6.7e-08, Sum P(3) = 6.7e-08
Identities = 10/41 (24%), Positives = 20/41 (48%)
Query: 826 LSKNGNPSSPVNSASDSNECDRNDSKSPQDLRSVSISSTIE 866
++ +GN +S + A DS+ D K L + + + +E
Sbjct: 813 INDHGNCASLLLGAIDSSIVSCRDDKGRTPLHAAAFADHVE 853
>ZFIN|ZDB-GENE-050522-247 [details] [associations]
symbol:ankrd52a "ankyrin repeat domain 52a"
species:7955 "Danio rerio" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR002110
Pfam:PF00023 PRINTS:PR01415 PROSITE:PS50088 SMART:SM00248
ZFIN:ZDB-GENE-050522-247 eggNOG:COG0666 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
HOGENOM:HOG000033959 HOVERGEN:HBG067697 EMBL:BC095664
IPI:IPI00495029 RefSeq:NP_001018164.1 UniGene:Dr.45557
ProteinModelPortal:Q502K3 GeneID:553206 KEGG:dre:553206 CTD:553206
InParanoid:Q502K3 KO:K15504 NextBio:20879996 Uniprot:Q502K3
Length = 1071
Score = 143 (55.4 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 48/173 (27%), Positives = 77/173 (44%)
Query: 282 SCTDKKVGPPLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKTSMGLSQH 341
SC DK+ PL A +G DV++ LL++ GN+ALH A T
Sbjct: 200 SCKDKRGYTPLHAAAASGHVDVVKYLLRN---GAEIDEPNAFGNTALHVACYTG------ 250
Query: 342 ILQNRIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQ-ALEDLIRKEPDCINLKTIMME 400
Q + L+ GA V+Q N G T LH+AA S N LE L+ D +N+++ +
Sbjct: 251 --QEAVANELVNRGANVNQPNHRGYTPLHLAAVSTNGALCLELLVNNGAD-VNMQSKEGK 307
Query: 401 TPLFFAVKNDHMVCAEVLLRWGANSEVLNLRRERPIDFAKSQDMRFLLKAANT 453
+PL A + +++L++ G + ++ P+ A L+ T
Sbjct: 308 SPLHMAAIHGRFTRSQILIQNGGEIDCVDRYGNTPLHVAAKYGHELLISTLMT 360
Score = 124 (48.7 bits), Expect = 9.0e-08, Sum P(2) = 9.0e-08
Identities = 71/277 (25%), Positives = 114/277 (41%)
Query: 278 VANGS---CTDKKVGPPLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCA-LK 333
+ NG C D+ PL +A + G E +I L+ + G LH A L
Sbjct: 326 IQNGGEIDCVDRYGNTPLHVAAKYGHELLISTLMTN---GADTARQGIHGMFPLHLAVLY 382
Query: 334 TSMGLSQHILQN-RIVGILL----KH----GAIVSQQNKLGLTALHIAAGSGNSQALEDL 384
S + +L + ++ I+L +H G ++ + G T LH AA GN + L L
Sbjct: 383 GSSDCCRKLLSSGQLYSIVLSMSKEHVLSAGFDINTPDNFGRTCLHAAASGGNIECLNLL 442
Query: 385 IRKEPDCINLKTIMMETPLFFAVKNDHMVCAEVLLRWGANSEVLNLRRERPIDFAKSQDM 444
+ D +N K TPL +A N C VL+ GA +EV ER D + +
Sbjct: 443 LSSGAD-MNKKDKFGRTPLHYAAANGRYQCVVVLV--GAGAEV----NER--DRSGCTPL 493
Query: 445 RFLLKAANTCHTNLAFLNQEKQNASLESDEDISGTCEALLSMVD--DNSNTERICSGTKI 502
+ AA+T AF ++ +AS +++ G E+ L + DN +C+
Sbjct: 494 HY--SAAST-----AFCRTDRPHASTHQNQE-DGEKESFLCVEHLLDNGADPCLCNTKGY 545
Query: 503 EVCKYYESHSGC----IRGSKCFYALGE-EQHRKMNP 534
Y +H + CF LG+ E + ++P
Sbjct: 546 SAVHYAAAHGNKQNLELLLEMCFNTLGDKESNGSISP 582
Score = 112 (44.5 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 45/149 (30%), Positives = 71/149 (47%)
Query: 291 PLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKTSMGLSQHILQNRIVGI 350
PL LA ++G + + +L++S G S L+ A + G H +R V +
Sbjct: 582 PLHLAVESGHWECVTVLIES---GVCVDVCDPVGRSVLYLA--SQRG---H---SRCVEL 630
Query: 351 LLKHGA---IVSQQNKLGLTALHIAAGSGNSQALEDLIRKE--PDCINLKTIMMETPLFF 405
LL A + ++K G LH+AA +G+S+ L L+ E D +N+ +TPL
Sbjct: 631 LLSQSASCLLAEHRSKWG--PLHVAAANGHSECLRMLLCSEGGADLVNVTDAEGQTPLML 688
Query: 406 AVKNDHMVCAEVLLRWGANSEVLNLRRER 434
AV H C +LL GA ++ + RR R
Sbjct: 689 AVLGGHTDCVHLLLERGACPDMKD-RRGR 716
Score = 109 (43.4 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 51/219 (23%), Positives = 98/219 (44%)
Query: 283 CTDKKVGP--PLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKTSMGLSQ 340
C+ ++ P PL A G E+LL+S G + LH A +++
Sbjct: 810 CSIQEGNPFTPLHCALINGHSGSAELLLESSVCNSLVNIRDAKGRTPLHAA-----AVAE 864
Query: 341 HILQNRIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLKTIMME 400
+ ++V L+ GA + + G +AL +AA G S A+ L+ + ++L +
Sbjct: 865 DVAGLQLV---LRQGADIDAVDHSGRSALMVAADYGQSGAVALLLHRAKADLSLLDVNKN 921
Query: 401 TPLFFAVKNDHMVCAEVLLRWGANSEVLNLRR---ERPIDFAKSQDMRFLLKAA-NTCHT 456
T L A H +CA ++L+ N ++N + P+ A + +++A N T
Sbjct: 922 TALHLACSKAHEMCAMLILKEIHNPILINATNSMLQMPLHIAARNGLATVVQALLNRGAT 981
Query: 457 NLAFLNQEKQNASLE--SDEDISGTCEALLSMVDDNSNT 493
LA +++E +L S++ ++ +LS + +S+T
Sbjct: 982 VLA-VDEEGHTPALACASNKAVADCLALILSTMKPSSST 1019
Score = 91 (37.1 bits), Expect = 9.0e-08, Sum P(2) = 9.0e-08
Identities = 30/90 (33%), Positives = 45/90 (50%)
Query: 40 RHFIDNSLDNADQQTAIVTKLLRVSCIFDSVSCATSLVNGDLGPVALVNEVEESSGMTAL 99
++ + N + D+ A L V+C + A LVN A VN+ G T L
Sbjct: 223 KYLLRNGAE-IDEPNAFGNTALHVACYTGQEAVANELVNRG----ANVNQPNHR-GYTPL 276
Query: 100 HLAAES-HTARCVELLLKKRARTDIRSKDG 128
HLAA S + A C+ELL+ A +++SK+G
Sbjct: 277 HLAAVSTNGALCLELLVNNGADVNMQSKEG 306
Score = 90 (36.7 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 39/140 (27%), Positives = 60/140 (42%)
Query: 284 TDKKVGPPLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKTSMGLSQHIL 343
TD + PL+LA G D + +LL+ G +ALH MG
Sbjct: 678 TDAEGQTPLMLAVLGGHTDCVHLLLER---GACPDMKDRRGRTALHRG--AVMG------ 726
Query: 344 QNRIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLKTIMME--- 400
+ + LL H V ++ G +ALH+AA G++ L +L+ D + + +
Sbjct: 727 REDCLTALLSHNVSVLSRDFQGRSALHLAASCGHADILSNLL-SAADHSQPQDPLTDRHG 785
Query: 401 -TPLFFAVKNDHMVCAEVLL 419
TP +A + H C EVLL
Sbjct: 786 YTPAHWAAYHGHEDCLEVLL 805
Score = 67 (28.6 bits), Expect = 0.00096, Sum P(2) = 0.00096
Identities = 22/68 (32%), Positives = 32/68 (47%)
Query: 61 LRVSCIFDSVSCATSLVNGDLGPVALVNEVEESSGMTALHLAAESHTARCVELLLKKRAR 120
L V+ C L+ + G LVN V ++ G T L LA CV LLL++ A
Sbjct: 650 LHVAAANGHSECLRMLLCSE-GGADLVN-VTDAEGQTPLMLAVLGGHTDCVHLLLERGAC 707
Query: 121 TDIRSKDG 128
D++ + G
Sbjct: 708 PDMKDRRG 715
Score = 60 (26.2 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 15/31 (48%), Positives = 17/31 (54%)
Query: 96 MTALHLAAESHTARCVELLLKKRARTDIRSK 126
+T LH AA S R V LLL+K A R K
Sbjct: 75 LTPLHRAAASRNERAVGLLLRKGADVTARDK 105
Score = 58 (25.5 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 97 TALHLAAESHTARCVELLLKKRARTDIRSKDG 128
T LH+AA + RCVE LL + ++ + G
Sbjct: 109 TPLHIAAANRATRCVETLLPHVSSLNMADRTG 140
Score = 55 (24.4 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 19/54 (35%), Positives = 26/54 (48%)
Query: 73 ATSLVNGDLGPVALVNEVEESSGMTALHLAAESHTARCVELLLKKRARTDIRSK 126
AT V L V+ +N + + +G LH AA+S V+LLL K A K
Sbjct: 119 ATRCVETLLPHVSSLN-MADRTGRAPLHHAAQSGYQEMVKLLLNKGANLSASDK 171
>UNIPROTKB|B7ZAU7 [details] [associations]
symbol:RIPK4 "Receptor-interacting serine/threonine-protein
kinase 4" species:9606 "Homo sapiens" [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR002110
InterPro:IPR000719 InterPro:IPR008271 InterPro:IPR011009
Pfam:PF00069 PRINTS:PR01415 PROSITE:PS00108 PROSITE:PS50011
PROSITE:PS50088 SMART:SM00248 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
HOVERGEN:HBG061582 UniGene:Hs.517310 HGNC:HGNC:496 ChiTaRS:RIPK4
EMBL:AP001615 EMBL:AP001616 EMBL:AK316412 IPI:IPI01011254
SMR:B7ZAU7 STRING:B7ZAU7 Ensembl:ENST00000542057
Ensembl:ENST00000544709 Uniprot:B7ZAU7
Length = 721
Score = 123 (48.4 bits), Expect = 9.1e-08, Sum P(2) = 9.1e-08
Identities = 45/149 (30%), Positives = 67/149 (44%)
Query: 292 LILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKTSMGLSQHILQNRIVGIL 351
L A Q GDE +LL+ G + +H A QH +N IV IL
Sbjct: 445 LHFAAQNGDESSTRLLLEKNASVNEVDFE---GRTPMHVAC-------QHGQEN-IVRIL 493
Query: 352 LKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDC-INLKTIMMETPLFFAVKND 410
L+ G VS Q K LH AA G+ ++ L+ K+P +N +T+ TPL A +
Sbjct: 494 LRRGVDVSLQGKDAWLPLHYAAWQGHLPIVK-LLAKQPGVSVNAQTLDGRTPLHLAAQRG 552
Query: 411 HMVCAEVLLRWGANSEVLNLRRERPIDFA 439
H A +L+ ++ V +L + P+ A
Sbjct: 553 HYRVARILIDLCSDVNVCSLLAQTPLHVA 581
Score = 110 (43.8 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 40/141 (28%), Positives = 63/141 (44%)
Query: 291 PLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKTSMGLSQHILQNRIVGI 350
PL +A + G +LL G +ALH A + H+ V +
Sbjct: 577 PLHVAAETGHTSTARLLLHR---GAGKEAMTSDGYTALHLAARNG-----HLAT---VKL 625
Query: 351 LLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLKTIMMETPLFFAVKND 410
L++ A V + L TALH+AA G+S+ +E+L+ D I+L + L A +
Sbjct: 626 LVEEKADVLARGPLNQTALHLAAAHGHSEVVEELV--SADVIDLFDEQGLSALHLAAQGR 683
Query: 411 HMVCAEVLLRWGANSEVLNLR 431
H E LLR GA+ + +L+
Sbjct: 684 HAQTVETLLRHGAHINLQSLK 704
Score = 106 (42.4 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 42/139 (30%), Positives = 63/139 (45%)
Query: 291 PLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKTSMGLSQHILQNRIVGI 350
P+ +A Q G E+++ ILL+ LH A G H+ IV +
Sbjct: 477 PMHVACQHGQENIVRILLRRGVDVSLQGKDAWL---PLHYA--AWQG---HL---PIVKL 525
Query: 351 LLKH-GAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLKTIMMETPLFFAVKN 409
L K G V+ Q G T LH+AA G+ + LI D +N+ +++ +TPL A +
Sbjct: 526 LAKQPGVSVNAQTLDGRTPLHLAAQRGHYRVARILIDLCSD-VNVCSLLAQTPLHVAAET 584
Query: 410 DHMVCAEVLLRWGANSEVL 428
H A +LL GA E +
Sbjct: 585 GHTSTARLLLHRGAGKEAM 603
Score = 88 (36.0 bits), Expect = 9.1e-08, Sum P(2) = 9.1e-08
Identities = 30/126 (23%), Positives = 56/126 (44%)
Query: 7 SYTAAPSVTDLETT-----LIINSLLEDDKKQLINVSKRHFIDNSLDNADQQTAIVTKLL 61
S+ PS +DL TT ++++++ D +L+ + + +D +LD+ LL
Sbjct: 327 SFEREPSTSDLGTTDVQKKKLVDAIVSGDTSKLMKILQPQDVDLALDSG-------ASLL 379
Query: 62 RVSCIFDSVSCATSLVNGDLGPVALVNEVEESSGMTALHLAAESHTARCVELLLKKRART 121
++ CA L+ + P + G T LH+A E VELLL ++
Sbjct: 380 HLAVEAGQEECAKWLLLNNANP-----NLSNRRGSTPLHMAVERRVRGVVELLLARKISV 434
Query: 122 DIRSKD 127
+ + +D
Sbjct: 435 NAKDED 440
Score = 60 (26.2 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 15/59 (25%), Positives = 30/59 (50%)
Query: 75 SLVNGDLGPVALVNEVEE-----SSGMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
++V+GD + + + ++ SG + LHLA E+ C + LL A ++ ++ G
Sbjct: 350 AIVSGDTSKLMKILQPQDVDLALDSGASLLHLAVEAGQEECAKWLLLNNANPNLSNRRG 408
>UNIPROTKB|O15084 [details] [associations]
symbol:ANKRD28 "Serine/threonine-protein phosphatase 6
regulatory ankyrin repeat subunit A" species:9606 "Homo sapiens"
[GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR002110 Pfam:PF00023
PRINTS:PR01415 PROSITE:PS50088 SMART:SM00248 GO:GO:0005654
eggNOG:COG0666 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 EMBL:AY367056 EMBL:AB002377
EMBL:AK126888 EMBL:AK293770 EMBL:BC106948 EMBL:BC113868
EMBL:BC114476 IPI:IPI00477505 IPI:IPI00514769 IPI:IPI00981632
IPI:IPI01009712 RefSeq:NP_001182027.1 RefSeq:NP_001182028.1
RefSeq:NP_056014.2 UniGene:Hs.335239 ProteinModelPortal:O15084
SMR:O15084 DIP:DIP-27583N IntAct:O15084 MINT:MINT-1150737
STRING:O15084 PhosphoSite:O15084 PaxDb:O15084 PRIDE:O15084
DNASU:23243 Ensembl:ENST00000383777 Ensembl:ENST00000399451
Ensembl:ENST00000412318 GeneID:23243 KEGG:hsa:23243 UCSC:uc003cai.1
UCSC:uc003cal.1 UCSC:uc003cam.2 CTD:23243 GeneCards:GC03M015708
H-InvDB:HIX0003106 HGNC:HGNC:29024 MIM:611122 neXtProt:NX_O15084
PharmGKB:PA134880251 HOGENOM:HOG000033959 HOVERGEN:HBG067697
InParanoid:O15084 KO:K15502 OMA:DMLNDSD OrthoDB:EOG4NCMCR
GenomeRNAi:23243 NextBio:44912 ArrayExpress:O15084 Bgee:O15084
CleanEx:HS_ANKRD28 Genevestigator:O15084 GermOnline:ENSG00000206560
Uniprot:O15084
Length = 1053
Score = 124 (48.7 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 49/182 (26%), Positives = 77/182 (42%)
Query: 279 ANGSCTDKKVGPPLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKTSMGL 338
A +C DKK PL A +G V++ LL GN+ LH A
Sbjct: 197 AEVTCKDKKSYTPLHAAASSGMISVVKYLLD---LGVDMNEPNAYGNTPLHVACYNG--- 250
Query: 339 SQHILQNRIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQ-ALEDLIRKEPDCINLKTI 397
Q+ +V L+ GAIV+Q+N+ G T LH AA S + LE L+ D +N+K+
Sbjct: 251 -----QDVVVNELIDCGAIVNQKNEKGFTPLHFAAASTHGALCLELLVGNGAD-VNMKSK 304
Query: 398 MMETPLFFAVKNDHMVCAEVLLRWGANSEVLNLRRERPIDFAKSQDMRFLLKAANTCHTN 457
+TPL + ++ +++ GA + + P+ A L+ T +
Sbjct: 305 DGKTPLHMTALHGRFSRSQTIIQSGAVIDCEDKNGNTPLHIAARYGHELLINTLITSGAD 364
Query: 458 LA 459
A
Sbjct: 365 TA 366
Score = 113 (44.8 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 64/263 (24%), Positives = 117/263 (44%)
Query: 276 GAVANGSCTDKKVGPPL-ILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKT 334
G+ A+ + D++ PL AT D +E LL++ G +A+H +
Sbjct: 459 GSGASVNDLDERGCTPLHYAATSDTDGKCLEYLLRNDANPGIRDKQ---GYNAVHYSAAY 515
Query: 335 SMGLSQHILQNRI-VGILLKHGA---IVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPD 390
L ++ + + +L++ + N+ ++ LH+AA G+ QALE L++ D
Sbjct: 516 GHRLCLQLIASETPLDVLMETSGTDMLSDSDNRATISPLHLAAYHGHHQALEVLVQSLLD 575
Query: 391 CINLKTIMMETPLFFAVKNDHMVCAEVLLRWGANSEVLN-LRRERPIDFAKSQDMRFLLK 449
++++ TPL A H+ C +VL+ GA+ V + + + PI A +
Sbjct: 576 -LDVRNSSGRTPLDLAAFKGHVECVDVLINQGASILVKDYILKRTPIHAAATN------- 627
Query: 450 AANTCHTNLAFLNQEKQNASLESDEDISGTCEALLSMVDDNSNTERICS----GTKIEVC 505
+ C L N E QNA +D +G +LS++ N +T+ + S G ++
Sbjct: 628 GHSEC-LRLLIGNAEPQNAV--DIQDGNGQTPLMLSVL--NGHTDCVYSLLNKGANVDAK 682
Query: 506 -KYYES--HSGCIRG-SKCFYAL 524
K+ + H G + G +C AL
Sbjct: 683 DKWGRTALHRGAVTGHEECVDAL 705
Score = 101 (40.6 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 34/96 (35%), Positives = 50/96 (52%)
Query: 34 LINVSKRHFIDNSLDNADQQTAIVTKLLRVSCIFDSVSCATSLVNGDLGPVALVNEVEES 93
+I+V K + +D +D ++ A L V+C L+ D G A+VN+ E
Sbjct: 218 MISVVK-YLLDLGVD-MNEPNAYGNTPLHVACYNGQDVVVNELI--DCG--AIVNQKNEK 271
Query: 94 SGMTALHLAAES-HTARCVELLLKKRARTDIRSKDG 128
G T LH AA S H A C+ELL+ A +++SKDG
Sbjct: 272 -GFTPLHFAAASTHGALCLELLVGNGADVNMKSKDG 306
Score = 98 (39.6 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 53/194 (27%), Positives = 78/194 (40%)
Query: 291 PLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKTSMGLSQHILQNRIVGI 350
PL LA +G D LL S G + LH A + G + L +
Sbjct: 375 PLHLAALSGFSDCCRKLLSS---GFDIDTPDDFGRTCLHAA---AAGGNLECLN-----L 423
Query: 351 LLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLKTIMMETPLFFAVKND 410
LL GA ++++K G + LH AA + N Q L L+ +L TPL +A +D
Sbjct: 424 LLNTGADFNKKDKFGRSPLHYAAANCNYQCLFALVGSGASVNDLDERGC-TPLHYAATSD 482
Query: 411 -HMVCAEVLLRWGANSEVLNLRRERPIDFAKSQDMRFLLKAANTCHTNLAFLNQEKQNAS 469
C E LLR AN + + + + ++ + R L+ + T L L E
Sbjct: 483 TDGKCLEYLLRNDANPGIRDKQGYNAVHYSAAYGHRLCLQLIAS-ETPLDVL-METSGTD 540
Query: 470 LESDEDISGTCEAL 483
+ SD D T L
Sbjct: 541 MLSDSDNRATISPL 554
Score = 82 (33.9 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 22/76 (28%), Positives = 39/76 (51%)
Query: 351 LLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLKTIMMETPLFFAVKND 410
LL GA V ++K G TALH A +G+ + ++ L++ C+ L+ TP+ +
Sbjct: 672 LLNKGANVDAKDKWGRTALHRGAVTGHEECVDALLQHGAKCL-LRDSRGRTPIHLSAACG 730
Query: 411 HMVCAEVLLRWGANSE 426
H+ LL+ A+ +
Sbjct: 731 HIGVLGALLQSAASMD 746
Score = 81 (33.6 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 37/132 (28%), Positives = 52/132 (39%)
Query: 291 PLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKTSMGLSQHILQNRIVGI 350
PL+L+ G D + LL G +ALH T H V
Sbjct: 656 PLMLSVLNGHTDCVYSLLNK---GANVDAKDKWGRTALHRGAVTG-----H---EECVDA 704
Query: 351 LLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDC-INLKTIMME--TPLFFAV 407
LL+HGA ++ G T +H++A G+ L L++ N T T L +A
Sbjct: 705 LLQHGAKCLLRDSRGRTPIHLSAACGHIGVLGALLQSAASMDANPATADNHGYTALHWAC 764
Query: 408 KNDHMVCAEVLL 419
N H C E+LL
Sbjct: 765 YNGHETCVELLL 776
Score = 81 (33.6 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 34/146 (23%), Positives = 57/146 (39%)
Query: 284 TDKKVGPPLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKTSMGLSQHIL 343
T+ PL A +E E+L+ + G + LH A T H+
Sbjct: 784 TEGNAFSPLHCAVINDNEGAAEMLIDT-LGASIVNATDSKGRTPLHAAAFTD-----HV- 836
Query: 344 QNRIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLKTIMMETPL 403
+ +LL H A V+ + G T L +AA +G + +E L+ + L+ T L
Sbjct: 837 --ECLQLLLSHNAQVNSVDSTGKTPLMMAAENGQTNTVEMLVSSASAELTLQDNSKNTAL 894
Query: 404 FFAVKNDHMVCAEVLLRWGANSEVLN 429
A H A ++L + ++N
Sbjct: 895 HLACSKGHETSALLILEKITDRNLIN 920
Score = 75 (31.5 bits), Expect = 0.00097, Sum P(2) = 0.00097
Identities = 26/95 (27%), Positives = 45/95 (47%)
Query: 333 KTSMGLSQHILQNRIVGILLKHG-AIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPD- 390
KT + ++ Q V +L+ A ++ Q+ TALH+A G+ + ++ K D
Sbjct: 857 KTPLMMAAENGQTNTVEMLVSSASAELTLQDNSKNTALHLACSKGHETSALLILEKITDR 916
Query: 391 -CINLKTIMMETPLFFAVKNDHMVCAEVLLRWGAN 424
IN ++TPL A +N + + LL GA+
Sbjct: 917 NLINATNAALQTPLHVAARNGLTMVVQELLGKGAS 951
Score = 75 (31.5 bits), Expect = 0.00097, Sum P(2) = 0.00097
Identities = 31/116 (26%), Positives = 50/116 (43%)
Query: 324 GNSALHCALKTSMGLSQHILQNRIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALED 383
GN+ LH A + H L ++ L+ GA +++ G+ LH+AA SG S
Sbjct: 339 GNTPLHIAARYG-----HEL---LINTLITSGADTAKRGIHGMFPLHLAALSGFSDCCRK 390
Query: 384 LIRKEPDCINLKTIMMETPLFFAVKNDHMVCAEVLLRWGANSEVLNLRRERPIDFA 439
L+ D I+ T L A ++ C +LL GA+ + P+ +A
Sbjct: 391 LLSSGFD-IDTPDDFGRTCLHAAAAGGNLECLNLLLNTGADFNKKDKFGRSPLHYA 445
Score = 70 (29.7 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 27/95 (28%), Positives = 44/95 (46%)
Query: 32 KQLINVSKRHFIDNSLDNADQQTAIVTKLLRVSCIFDSVSCATSLVNGDLGPVALVNEVE 91
++ + V +H D + + + QT L ++ +V CA +LV P+ V
Sbjct: 87 EEAVQVLLKHSADVNARDKNWQTP-----LHIAAANKAVKCAEALV-----PLLSNVNVS 136
Query: 92 ESSGMTALHLAAESHTARCVELLLKKRARTDIRSK 126
+ +G TALH AA S V+LLL + A + K
Sbjct: 137 DRAGRTALHHAAFSGHGEMVKLLLSRGANINAFDK 171
>UNIPROTKB|F1MN41 [details] [associations]
symbol:ASB3 "Ankyrin repeat and SOCS box protein 3"
species:9913 "Bos taurus" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] InterPro:IPR002110 InterPro:IPR001496 Pfam:PF07525
PRINTS:PR01415 PROSITE:PS50088 PROSITE:PS50225 SMART:SM00248
SMART:SM00969 UniPathway:UPA00143 GO:GO:0035556 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
GO:GO:0016567 GO:GO:0005622 GeneTree:ENSGT00530000063050
IPI:IPI00703324 UniGene:Bt.6801 OMA:HLAYCLK EMBL:DAAA02030893
EMBL:DAAA02030890 EMBL:DAAA02030891 EMBL:DAAA02030892
Ensembl:ENSBTAT00000025921 Uniprot:F1MN41
Length = 525
Score = 149 (57.5 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 48/151 (31%), Positives = 74/151 (49%)
Query: 277 AVANGSCTDKKVGPPLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKTSM 336
A A+ + T + PL LA + G DV+ +LL+ G +ALH A +
Sbjct: 101 AGADPNATTLEETTPLFLAVENGQIDVLRLLLR--YGANVNGSHSMCGWNALHQA--SFQ 156
Query: 337 GLSQHILQNRIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLKT 396
G ++ I+ +LLK GA Q+ G+T L +AA G ++L LI D +N +
Sbjct: 157 GNAE------IIKLLLKKGANKECQDDFGITPLFVAAQYGKLESLSILISSGAD-VNCQA 209
Query: 397 IMMETPLFFAVKNDHMVCAEVLLRWGANSEV 427
+ TPLF A + H C E+LL GA+ ++
Sbjct: 210 LDKATPLFIAAQEGHTECVELLLSSGADPDL 240
Score = 56 (24.8 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 16/52 (30%), Positives = 25/52 (48%)
Query: 68 DSVSCATSLVNGDLGPVALVNEVEESSGMTALHLAAESHTARCVELLLKKRA 119
+SV C L+ D + + E G ALHLAA + +++LL+ A
Sbjct: 54 NSVECLRMLIRADSSENYIKTKTFE--GFCALHLAASQGHWKIIQILLEAGA 103
>UNIPROTKB|Q08DV6 [details] [associations]
symbol:ASB3 "Ankyrin repeat and SOCS box protein 3"
species:9913 "Bos taurus" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] InterPro:IPR002110 InterPro:IPR001496 Pfam:PF07525
PRINTS:PR01415 PROSITE:PS50088 PROSITE:PS50225 SMART:SM00248
SMART:SM00969 UniPathway:UPA00143 GO:GO:0035556 eggNOG:COG0666
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0016567 GO:GO:0005622 EMBL:BC123548
IPI:IPI00703324 RefSeq:NP_001070395.1 UniGene:Bt.6801
ProteinModelPortal:Q08DV6 GeneID:540802 KEGG:bta:540802 CTD:51130
HOGENOM:HOG000022587 HOVERGEN:HBG024356 InParanoid:Q08DV6 KO:K10325
OrthoDB:EOG4NVZK3 NextBio:20878842 Uniprot:Q08DV6
Length = 525
Score = 149 (57.5 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 48/151 (31%), Positives = 74/151 (49%)
Query: 277 AVANGSCTDKKVGPPLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKTSM 336
A A+ + T + PL LA + G DV+ +LL+ G +ALH A +
Sbjct: 101 AGADPNATTLEETTPLFLAVENGQIDVLRLLLR--YGANVNGSHSMCGWNALHQA--SFQ 156
Query: 337 GLSQHILQNRIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLKT 396
G ++ I+ +LLK GA Q+ G+T L +AA G ++L LI D +N +
Sbjct: 157 GNAE------IIKLLLKKGANKECQDDFGITPLFVAAQYGKLESLSILISSGAD-VNCQA 209
Query: 397 IMMETPLFFAVKNDHMVCAEVLLRWGANSEV 427
+ TPLF A + H C E+LL GA+ ++
Sbjct: 210 LDKATPLFIAAQEGHTECVELLLSSGADPDL 240
Score = 56 (24.8 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 16/52 (30%), Positives = 25/52 (48%)
Query: 68 DSVSCATSLVNGDLGPVALVNEVEESSGMTALHLAAESHTARCVELLLKKRA 119
+SV C L+ D + + E G ALHLAA + +++LL+ A
Sbjct: 54 NSVECLRMLIRADSSENYIKTKTFE--GFCALHLAASQGHWKIIQILLEAGA 103
>FB|FBgn0260943 [details] [associations]
symbol:Rbp6 "RNA-binding protein 6" species:7227 "Drosophila
melanogaster" [GO:0003729 "mRNA binding" evidence=NAS] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005737
EMBL:AE014296 GO:GO:0008266 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0005844 eggNOG:COG0724 KO:K14411 GeneTree:ENSGT00700000104255
GO:GO:0048864 OMA:ENYISAA EMBL:AY122226 EMBL:S51715 PIR:F48110
RefSeq:NP_001097631.1 RefSeq:NP_001097632.1 RefSeq:NP_730245.2
UniGene:Dm.22292 HSSP:Q61474 ProteinModelPortal:Q9VVE5 SMR:Q9VVE5
DIP:DIP-19056N IntAct:Q9VVE5 MINT:MINT-918255
EnsemblMetazoa:FBtr0075285 GeneID:39919 KEGG:dme:Dmel_CG32169
UCSC:CG32169-RA CTD:39919 FlyBase:FBgn0260943 InParanoid:Q9VVE5
OrthoDB:EOG4MSBF6 GenomeRNAi:39919 NextBio:816085 Bgee:Q9VVE5
Uniprot:Q9VVE5
Length = 369
Score = 154 (59.3 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 43/95 (45%), Positives = 52/95 (54%)
Query: 549 KIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVA-EFQTEKQSVSRGFGFVTFKHEKSAAA 607
KIFVGGL + + YFE+ FGPIEDA + + QT + RGFGFVTF+ E
Sbjct: 119 KIFVGGLSAPTTLEDVKSYFEQ-FGPIEDAMLMFDKQTNRH---RGFGFVTFQSEDVVDK 174
Query: 608 AVQARFVTIMGKEVEIKSAVPKEVLF-AELQKQSA 641
+ F I K VE K A PKEV+ A L K A
Sbjct: 175 VCEIHFHEINNKMVECKKAQPKEVMLPANLAKTRA 209
Score = 123 (48.4 bits), Expect = 0.00032, P = 0.00032
Identities = 33/104 (31%), Positives = 54/104 (51%)
Query: 526 EEQHRKMNPGMCMIHASTQEFKSKIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQT 585
++Q +++ G C + K+F+GGL + +SL YF + +G I +A V + T
Sbjct: 8 QQQQQQVELGPCS-PSEVPNDPGKMFIGGLSWQTSPESLRDYFGR-YGDISEAMVMKDPT 65
Query: 586 EKQSVSRGFGFVTFKHEKSAAAAVQARFVTIMGKEVEIKSAVPK 629
++S RGFGFVTF S + + GK+V+ K A P+
Sbjct: 66 TRRS--RGFGFVTFSDPNSVDKVLTQGTHELDGKKVDPKVAFPR 107
>UNIPROTKB|P57078 [details] [associations]
symbol:RIPK4 "Receptor-interacting serine/threonine-protein
kinase 4" species:9606 "Homo sapiens" [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0002009 "morphogenesis of
an epithelium" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR002110 InterPro:IPR000719
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00023 Pfam:PF00069 PRINTS:PR01415 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 PROSITE:PS50088 SMART:SM00248
GO:GO:0005524 GO:GO:0002009 GO:GO:0005737 GO:GO:0016020
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
HOGENOM:HOG000294086 HOVERGEN:HBG061582 EMBL:AB047783 EMBL:AP001743
IPI:IPI00025714 IPI:IPI00215935 UniGene:Hs.517310
ProteinModelPortal:P57078 SMR:P57078 IntAct:P57078 STRING:P57078
PhosphoSite:P57078 DMDM:10719883 PaxDb:P57078 PRIDE:P57078
Ensembl:ENST00000332512 Ensembl:ENST00000352483 UCSC:uc002yzn.1
GeneCards:GC21M043159 HGNC:HGNC:496 HPA:HPA021158 MIM:263650
MIM:605706 neXtProt:NX_P57078 Orphanet:1234 InParanoid:P57078
OMA:DLRFRII PhylomeDB:P57078 BindingDB:P57078 ChEMBL:CHEMBL6083
ChiTaRS:RIPK4 ArrayExpress:P57078 Bgee:P57078 CleanEx:HS_RIPK4
Genevestigator:P57078 GermOnline:ENSG00000183421 Uniprot:P57078
Length = 832
Score = 123 (48.4 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 45/149 (30%), Positives = 67/149 (44%)
Query: 292 LILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKTSMGLSQHILQNRIVGIL 351
L A Q GDE +LL+ G + +H A QH +N IV IL
Sbjct: 556 LHFAAQNGDESSTRLLLEKNASVNEVDFE---GRTPMHVAC-------QHGQEN-IVRIL 604
Query: 352 LKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDC-INLKTIMMETPLFFAVKND 410
L+ G VS Q K LH AA G+ ++ L+ K+P +N +T+ TPL A +
Sbjct: 605 LRRGVDVSLQGKDAWLPLHYAAWQGHLPIVK-LLAKQPGVSVNAQTLDGRTPLHLAAQRG 663
Query: 411 HMVCAEVLLRWGANSEVLNLRRERPIDFA 439
H A +L+ ++ V +L + P+ A
Sbjct: 664 HYRVARILIDLCSDVNVCSLLAQTPLHVA 692
Score = 110 (43.8 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 40/141 (28%), Positives = 63/141 (44%)
Query: 291 PLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKTSMGLSQHILQNRIVGI 350
PL +A + G +LL G +ALH A + H+ V +
Sbjct: 688 PLHVAAETGHTSTARLLLHR---GAGKEAMTSDGYTALHLAARNG-----HLAT---VKL 736
Query: 351 LLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLKTIMMETPLFFAVKND 410
L++ A V + L TALH+AA G+S+ +E+L+ D I+L + L A +
Sbjct: 737 LVEEKADVLARGPLNQTALHLAAAHGHSEVVEELV--SADVIDLFDEQGLSALHLAAQGR 794
Query: 411 HMVCAEVLLRWGANSEVLNLR 431
H E LLR GA+ + +L+
Sbjct: 795 HAQTVETLLRHGAHINLQSLK 815
Score = 106 (42.4 bits), Expect = 8.1e-06, Sum P(2) = 8.1e-06
Identities = 42/139 (30%), Positives = 63/139 (45%)
Query: 291 PLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKTSMGLSQHILQNRIVGI 350
P+ +A Q G E+++ ILL+ LH A G H+ IV +
Sbjct: 588 PMHVACQHGQENIVRILLRRGVDVSLQGKDAWL---PLHYA--AWQG---HL---PIVKL 636
Query: 351 LLKH-GAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLKTIMMETPLFFAVKN 409
L K G V+ Q G T LH+AA G+ + LI D +N+ +++ +TPL A +
Sbjct: 637 LAKQPGVSVNAQTLDGRTPLHLAAQRGHYRVARILIDLCSD-VNVCSLLAQTPLHVAAET 695
Query: 410 DHMVCAEVLLRWGANSEVL 428
H A +LL GA E +
Sbjct: 696 GHTSTARLLLHRGAGKEAM 714
Score = 88 (36.0 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 30/126 (23%), Positives = 56/126 (44%)
Query: 7 SYTAAPSVTDLETT-----LIINSLLEDDKKQLINVSKRHFIDNSLDNADQQTAIVTKLL 61
S+ PS +DL TT ++++++ D +L+ + + +D +LD+ LL
Sbjct: 438 SFEREPSTSDLGTTDVQKKKLVDAIVSGDTSKLMKILQPQDVDLALDSG-------ASLL 490
Query: 62 RVSCIFDSVSCATSLVNGDLGPVALVNEVEESSGMTALHLAAESHTARCVELLLKKRART 121
++ CA L+ + P + G T LH+A E VELLL ++
Sbjct: 491 HLAVEAGQEECAKWLLLNNANP-----NLSNRRGSTPLHMAVERRVRGVVELLLARKISV 545
Query: 122 DIRSKD 127
+ + +D
Sbjct: 546 NAKDED 551
Score = 60 (26.2 bits), Expect = 9.5e-05, Sum P(2) = 9.5e-05
Identities = 15/59 (25%), Positives = 30/59 (50%)
Query: 75 SLVNGDLGPVALVNEVEE-----SSGMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
++V+GD + + + ++ SG + LHLA E+ C + LL A ++ ++ G
Sbjct: 461 AIVSGDTSKLMKILQPQDVDLALDSGASLLHLAVEAGQEECAKWLLLNNANPNLSNRRG 519
>FB|FBgn0011747 [details] [associations]
symbol:Ank "Ankyrin" species:7227 "Drosophila melanogaster"
[GO:0045170 "spectrosome" evidence=IDA;TAS] [GO:0045169 "fusome"
evidence=NAS;IDA] [GO:0007016 "cytoskeletal anchoring at plasma
membrane" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005200 "structural constituent of cytoskeleton" evidence=ISS]
[GO:0008092 "cytoskeletal protein binding" evidence=ISS]
[GO:0007165 "signal transduction" evidence=IEA] InterPro:IPR000488
Pfam:PF00531 InterPro:IPR002110 Pfam:PF00023 Pfam:PF13606
PRINTS:PR01415 PROSITE:PS50017 PROSITE:PS50088 SMART:SM00005
SMART:SM00248 GO:GO:0005886 GO:GO:0007165 GO:GO:0008092
eggNOG:COG0666 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0007016 Gene3D:1.10.533.10
InterPro:IPR011029 SUPFAM:SSF47986 KO:K10380 InterPro:IPR000906
Pfam:PF00791 SMART:SM00218 PROSITE:PS51145
GeneTree:ENSGT00700000104348 CTD:11732 EMBL:AE014135 GO:GO:0045169
GO:GO:0045170 EMBL:BT031123 RefSeq:NP_001162819.1
RefSeq:NP_001162820.1 RefSeq:NP_787121.1 RefSeq:NP_787122.1
RefSeq:NP_787123.1 RefSeq:NP_787124.1 UniGene:Dm.1891 SMR:Q0KIE7
STRING:Q0KIE7 EnsemblMetazoa:FBtr0089171 EnsemblMetazoa:FBtr0089172
EnsemblMetazoa:FBtr0089173 GeneID:43770 KEGG:dme:Dmel_CG1651
UCSC:CG1651-RA FlyBase:FBgn0011747 InParanoid:Q0KIE7 OMA:VYLEFAG
OrthoDB:EOG4W6M9S GenomeRNAi:43770 NextBio:835712 Uniprot:Q0KIE7
Length = 1549
Score = 145 (56.1 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 43/138 (31%), Positives = 71/138 (51%)
Query: 291 PLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKTSMGLSQHILQNRIVGI 350
PL LA Q G+ D++++LL+ G + LH A + H+L ++I
Sbjct: 665 PLHLAAQGGNVDMVQLLLE----YGVISAAAKNGLTPLHVAAQEG-----HVLVSQI--- 712
Query: 351 LLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLKTIMMETPLFFAVKND 410
LL+HGA +S++ + G T LH+AA G+ ++ I + D I + + + TPL A +
Sbjct: 713 LLEHGANISERTRNGYTPLHMAAHYGHLDLVKFFIENDAD-IEMSSNIGYTPLHQAAQQG 771
Query: 411 HMVCAEVLLRWGANSEVL 428
H++ +LLR AN L
Sbjct: 772 HIMIINLLLRHKANPNAL 789
Score = 127 (49.8 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 46/148 (31%), Positives = 72/148 (48%)
Query: 280 NGSCTD---KKVGPPLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKTSM 336
NG+ D K PL +AT + ++E+LLK+ G A+H A K
Sbjct: 585 NGASIDFQGKNDVTPLHVATHYNNPSIVELLLKN---GSSPNLCARNGQCAIHIACK--- 638
Query: 337 GLSQHILQNRIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLKT 396
++ L+ I LL+HGA V+ +K G + LH+AA GN ++ L+ E I+
Sbjct: 639 ---KNYLE--IAMQLLQHGADVNIISKSGFSPLHLAAQGGNVDMVQLLL--EYGVISAAA 691
Query: 397 IMMETPLFFAVKNDHMVCAEVLLRWGAN 424
TPL A + H++ +++LL GAN
Sbjct: 692 KNGLTPLHVAAQEGHVLVSQILLEHGAN 719
Score = 120 (47.3 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
Identities = 45/164 (27%), Positives = 74/164 (45%)
Query: 276 GAVANGSCTDKKVGPPLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKTS 335
GA N DK L +A + G E+++++LL++ G + LH A K
Sbjct: 520 GAEINAQSNDKYSA--LHIAAKEGQENIVQVLLEN---GAENNAVTKKGFTPLHLACKYG 574
Query: 336 MGLSQHILQNRIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLK 395
QN +V ILL++GA + Q K +T LH+A N +E L+ K NL
Sbjct: 575 K-------QN-VVQILLQNGASIDFQGKNDVTPLHVATHYNNPSIVE-LLLKNGSSPNLC 625
Query: 396 TIMMETPLFFAVKNDHMVCAEVLLRWGANSEVLNLRRERPIDFA 439
+ + A K +++ A LL+ GA+ +++ P+ A
Sbjct: 626 ARNGQCAIHIACKKNYLEIAMQLLQHGADVNIISKSGFSPLHLA 669
Score = 120 (47.3 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
Identities = 51/174 (29%), Positives = 78/174 (44%)
Query: 291 PLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKTSMGLSQHILQNRIVGI 350
PL LA +A D+I ILL+S G + LH A + +G +I I+ +
Sbjct: 468 PLHLAARANQADIIRILLRS----AKVDAIAREGQTPLHVASR--LG---NI---NIIML 515
Query: 351 LLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLKTIMMETPLFFAVKND 410
LL+HGA ++ Q+ +ALHIAA G ++ L+ + N T TPL A K
Sbjct: 516 LLQHGAEINAQSNDKYSALHIAAKEGQENIVQVLLENGAEN-NAVTKKGFTPLHLACKYG 574
Query: 411 HMVCAEVLLRWGANSEVLNLRRERPIDFAKSQD----MRFLLK---AANTCHTN 457
++LL+ GA+ + P+ A + + LLK + N C N
Sbjct: 575 KQNVVQILLQNGASIDFQGKNDVTPLHVATHYNNPSIVELLLKNGSSPNLCARN 628
Score = 71 (30.1 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 17/45 (37%), Positives = 24/45 (53%)
Query: 84 VALVNEVEESSGMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
V L N+V + ALH+AA+ + +LLL+ DI SK G
Sbjct: 190 VLLENDVRGKVRLPALHIAAKKNDVNAAKLLLQHDPNADIVSKSG 234
Score = 64 (27.6 bits), Expect = 7.6e-07, Sum P(2) = 7.6e-07
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 80 DLGPVALVNEVEESSGMTALHLAA-ESHTARCVELLLKKRARTDIRSKDG 128
D G ++ +N ++G+ ALHLAA + + C ELL ++ + D +K G
Sbjct: 59 DCGEISDINSCN-ANGLNALHLAAKDGYVDICCELL-RRGIKIDNATKKG 106
Score = 62 (26.9 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 15/44 (34%), Positives = 24/44 (54%)
Query: 85 ALVNEVEESSGMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
A VN V+ +G T L++AA+ + C LL A + ++DG
Sbjct: 130 ANVN-VQSLNGFTPLYMAAQENHDNCCRTLLANGANPSLSTEDG 172
Score = 61 (26.5 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 24/85 (28%), Positives = 36/85 (42%)
Query: 47 LDN---ADQQTAIVTKLLRVSCIFDSVSCATSLVNGDLGPVALVNEVEESSGMTALHLAA 103
LDN D+ T L V+ V A L++ P A +G T LH+A
Sbjct: 353 LDNKAPVDEVTVDYLTALHVAAHCGHVKVAKLLLDYKANPNA-----RALNGFTPLHIAC 407
Query: 104 ESHTARCVELLLKKRARTDIRSKDG 128
+ + + VELL+K A ++ G
Sbjct: 408 KKNRIKMVELLIKHGANIGATTESG 432
Score = 59 (25.8 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 13/34 (38%), Positives = 22/34 (64%)
Query: 95 GMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
G T LHLAA ++ A + +LL+ A+ D +++G
Sbjct: 465 GETPLHLAARANQADIIRILLRS-AKVDAIAREG 497
Score = 57 (25.1 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 88 NEVEESSGMTALHLAAESHTARCVELLLKKRARTDIRSKD 127
N G T LHLA + V++LL+ A D + K+
Sbjct: 556 NNAVTKKGFTPLHLACKYGKQNVVQILLQNGASIDFQGKN 595
Score = 55 (24.4 bits), Expect = 6.4e-06, Sum P(2) = 6.4e-06
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 94 SGMTALHLAAESHTARCVELLLKKRARTD 122
+G++ALH+AA+ LLL +A D
Sbjct: 332 NGLSALHMAAQGEHDEAAHLLLDNKAPVD 360
Score = 54 (24.1 bits), Expect = 8.1e-06, Sum P(2) = 8.1e-06
Identities = 22/80 (27%), Positives = 36/80 (45%)
Query: 47 LDNADQQTAIVTKLLRVSCIFDSVSCATSLVNGDLGPVALVNEVEESSGMTALHLAAESH 106
L+N D + + L ++ + V+ A L+ D P A ++ SG T LH+AA
Sbjct: 192 LEN-DVRGKVRLPALHIAAKKNDVNAAKLLLQHD--PNA---DIVSKSGFTPLHIAAHYG 245
Query: 107 TARCVELLLKKRARTDIRSK 126
LLL +A + +K
Sbjct: 246 NVDIATLLLNNKADVNYVAK 265
Score = 53 (23.7 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 19/69 (27%), Positives = 33/69 (47%)
Query: 61 LRVSCIFDSVS-CATSLVNGDLGPVALVNEVEESSGMTALHLAAESHTARCVELLLKKRA 119
L V+C + +S C L G A ++ G+T LH A+ S ++ LL++ A
Sbjct: 271 LHVACKWGKLSLCTLLLCRG-----AKIDAATRD-GLTPLHCASRSGHVEVIKHLLQQNA 324
Query: 120 RTDIRSKDG 128
++K+G
Sbjct: 325 PILTKTKNG 333
Score = 50 (22.7 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 13/44 (29%), Positives = 24/44 (54%)
Query: 85 ALVNEVEESSGMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
A +N + + +ALH+AA+ V++LL+ A + +K G
Sbjct: 521 AEIN-AQSNDKYSALHIAAKEGQENIVQVLLENGAENNAVTKKG 563
Score = 47 (21.6 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 95 GMTALHLAAESHTARCVELLLKKRARTDIRSKD 127
G T LH+A+ + LLL+ A + +S D
Sbjct: 497 GQTPLHVASRLGNINIIMLLLQHGAEINAQSND 529
Score = 45 (20.9 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 94 SGMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
+G A+H+A + + LL+ A +I SK G
Sbjct: 628 NGQCAIHIACKKNYLEIAMQLLQHGADVNIISKSG 662
Score = 44 (20.5 bits), Expect = 8.5e-05, Sum P(2) = 8.5e-05
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 94 SGMTALHLAAESHTARCVELLLKKRARTDI 123
SG+T LH+A+ V LL+ A D+
Sbjct: 431 SGLTPLHVASFMGCINIVIYLLQHEASADL 460
Score = 43 (20.2 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 10/34 (29%), Positives = 19/34 (55%)
Query: 95 GMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
G TALH+A+ + + L+ A +++S +G
Sbjct: 106 GNTALHIASLAGQHDVINQLILYNANVNVQSLNG 139
Score = 42 (19.8 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 17/53 (32%), Positives = 24/53 (45%)
Query: 72 CATSLVNGDLGPVALVNEVEESSGMTALHLAAESHTARCVELLLKKRARTDIR 124
C T L NG P +L E G T L +A + + V +LL+ R +R
Sbjct: 155 CRTLLANG-ANP-SLSTE----DGFTPLAVAMQQGHDKIVAVLLENDVRGKVR 201
>ZFIN|ZDB-GENE-030131-618 [details] [associations]
symbol:hnrnpa0l "heterogeneous nuclear
ribonucleoprotein A0, like" species:7955 "Danio rerio" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 ZFIN:ZDB-GENE-030131-618
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 HOVERGEN:HBG002295
GeneTree:ENSGT00700000104255 HOGENOM:HOG000234442 EMBL:BX088707
EMBL:BC050513 IPI:IPI00489762 UniGene:Dr.75590 UniGene:Dr.79301
SMR:Q7ZU48 STRING:Q7ZU48 Ensembl:ENSDART00000052511
InParanoid:Q7ZU48 OMA:ICRRIAP Uniprot:Q7ZU48
Length = 302
Score = 150 (57.9 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 38/83 (45%), Positives = 51/83 (61%)
Query: 549 KIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQS-VSRGFGFVTFKHEKSAAA 607
KIFVGGL ++ + L YF + FGPIE A+V T+K + RGFGFV F SA
Sbjct: 98 KIFVGGLKDDIEDEHLQDYFSQ-FGPIEKAQVI---TDKDTGKKRGFGFVYFDDNDSADK 153
Query: 608 AVQARFVTIMGKEVEIKSAVPKE 630
AV +F +I G +VE+K A+ K+
Sbjct: 154 AVVMKFHSICGHKVEVKKALTKQ 176
>DICTYBASE|DDB_G0287459 [details] [associations]
symbol:secG "Arf guanyl-nucleotide exchange factor"
species:44689 "Dictyostelium discoideum" [GO:0031589
"cell-substrate adhesion" evidence=IMP] [GO:0006935 "chemotaxis"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0005764
"lysosome" evidence=IDA] [GO:0032012 "regulation of ARF protein
signal transduction" evidence=IEA] [GO:0005543 "phospholipid
binding" evidence=IEA] [GO:0005086 "ARF guanyl-nucleotide exchange
factor activity" evidence=IEA] Pfam:PF00169 InterPro:IPR002110
InterPro:IPR000904 InterPro:IPR001849 Pfam:PF01369 PRINTS:PR01415
PROSITE:PS50003 PROSITE:PS50088 PROSITE:PS50190 SMART:SM00222
SMART:SM00233 SMART:SM00248 dictyBase:DDB_G0287459 GO:GO:0005829
GO:GO:0005543 Gene3D:2.30.29.30 InterPro:IPR011993 eggNOG:COG0666
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GenomeReviews:CM000154_GR GO:GO:0005764
GO:GO:0006935 EMBL:AAFI02000101 GO:GO:0031589 GO:GO:0005086
GO:GO:0032012 Gene3D:1.10.1000.11 InterPro:IPR023394
SUPFAM:SSF48425 HSSP:Q99418 EMBL:U78755 RefSeq:XP_637214.1
ProteinModelPortal:Q54KA7 EnsemblProtists:DDB0191439 GeneID:8626150
KEGG:ddi:DDB_G0287459 Uniprot:Q54KA7
Length = 986
Score = 129 (50.5 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 46/163 (28%), Positives = 71/163 (43%)
Query: 283 CTDKKVGPPLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKTSMGLSQHI 342
C D + L LA G D++++L++ K G + LH K S + H
Sbjct: 330 CRDSRQSTSLHLAAFNGLLDMVDLLIRYKAQINIKDEE---GATPLH---KASF--NGH- 380
Query: 343 LQNRIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLKTIMMETP 402
+ +L+ GA + + G T LH AA +G S+ L LIR + + +K TP
Sbjct: 381 --SSCAKLLVDKGAPICIVDSQGATPLHKAAFNGRSKCLATLIRSGAE-LEVKDSQGGTP 437
Query: 403 LFFAVKNDHMVCAEVLLRWGANSEVLNLRRERPIDFAKSQDMR 445
L A N H C +LL+ GAN ++ P+ A + R
Sbjct: 438 LHNAAYNGHSDCCRILLKKGANVNAVDTHSSTPLHLASAAGAR 480
Score = 127 (49.8 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 33/92 (35%), Positives = 54/92 (58%)
Query: 350 ILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLKTIMMETPLFFAVKN 409
ILLK GA V+ + T LH+A+ +G ++ LI+ + I+ K +TPL +A+K
Sbjct: 452 ILLKKGANVNAVDTHSSTPLHLASAAGARDTVDVLIQFKAR-IDAKNFAGKTPLVYAIKK 510
Query: 410 DHMVCAEVLLRWGANSEVLNLRRERPIDFAKS 441
+H A VL+R GA+ + ++LR +DF K+
Sbjct: 511 NHSDVARVLIRAGADLDQVSLRSS--VDFTKT 540
Score = 95 (38.5 bits), Expect = 0.00087, Sum P(2) = 0.00087
Identities = 37/168 (22%), Positives = 70/168 (41%)
Query: 351 LLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLKTIMMETPLFFAVKND 410
L++ GA ++ +++G T LH AA +G+ + E L+ +P I+ + T L A N
Sbjct: 287 LIELGAKINMVDEMGETPLHKAAFNGHKEVCEYLLYLDPTMIDCRDSRQSTSLHLAAFNG 346
Query: 411 HMVCAEVLLRWGANSEVLNLRRERPIDFAKSQDMRFLLKAANTCHTNLAFLNQEKQNASL 470
+ ++L+R+ A + + P+ A K + + + Q A+
Sbjct: 347 LLDMVDLLIRYKAQINIKDEEGATPLHKASFNGHSSCAKLLVDKGAPICIV--DSQGATP 404
Query: 471 ESDEDISGTCEALLSMVDDNSNTERICS--GTKIEVCKYYESHSGCIR 516
+G + L +++ + E S GT + Y HS C R
Sbjct: 405 LHKAAFNGRSKCLATLIRSGAELEVKDSQGGTPLHNAAY-NGHSDCCR 451
Score = 81 (33.6 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 21/67 (31%), Positives = 33/67 (49%)
Query: 61 LRVSCIFDSVSCATSLVNGDLGPVALVNEVEESSGMTALHLAAESHTARCVELLLKKRAR 120
L + +F S C L+NG P A+ ++G T LH A+ +CVELL+K ++
Sbjct: 140 LHKASLFASAECVLYLLNGKADPRAVT-----TNGETPLHHASAGGNPQCVELLIKADSK 194
Query: 121 TDIRSKD 127
+ D
Sbjct: 195 VNAVDND 201
Score = 74 (31.1 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 22/57 (38%), Positives = 29/57 (50%)
Query: 72 CATSLVNGDLGPVALVNEVEESSGMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
C L+ D + VN V+ +T LH A+ S + CV LLLKK A+ D R G
Sbjct: 184 CVELLIKAD----SKVNAVDNDC-ITPLHQASFSGHSSCVSLLLKKGAKVDPRDIHG 235
Score = 74 (31.1 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 71 SCATSLVNGDLG-PVALVNEVEESSGMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
SCA LV D G P+ +V +S G T LH AA + ++C+ L++ A +++ G
Sbjct: 382 SCAKLLV--DKGAPICIV----DSQGATPLHKAAFNGRSKCLATLIRSGAELEVKDSQG 434
Score = 65 (27.9 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 15/40 (37%), Positives = 21/40 (52%)
Query: 89 EVEESSGMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
+ +S T LH AA +A CV LL K+A +I+ G
Sbjct: 63 DTPDSEKRTPLHHAAFCGSAACVNFLLDKKANANIKDSAG 102
Score = 65 (27.9 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 15/34 (44%), Positives = 21/34 (61%)
Query: 89 EVEESSGMTALHLAAESHTARCVELLLKKRARTD 122
EV++S G T LH AA + + C +LLKK A +
Sbjct: 428 EVKDSQGGTPLHNAAYNGHSDCCRILLKKGANVN 461
Score = 63 (27.2 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 23/87 (26%), Positives = 41/87 (47%)
Query: 41 HFIDNSLDNADQQTAIVTKLLRVSCIFDSVSCATSLVNGDLGPVALVNEVEESSGMTALH 100
+ ++NS + D + L + S +C VN L A N +++S+G T L
Sbjct: 53 NLLNNSATSPDTPDSEKRTPLHHAAFCGSAAC----VNFLLDKKANAN-IKDSAGNTPLQ 107
Query: 101 LAAESHTARCVELLLKKRARTDIRSKD 127
A+ C++LL++K D+ +KD
Sbjct: 108 WASSRGHLECIKLLVEKGG-VDVNTKD 133
Score = 62 (26.9 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 13/40 (32%), Positives = 26/40 (65%)
Query: 89 EVEESSGMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
+ +S T+LHLAA + V+LL++ +A+ +I+ ++G
Sbjct: 329 DCRDSRQSTSLHLAAFNGLLDMVDLLIRYKAQINIKDEEG 368
Score = 52 (23.4 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 14/44 (31%), Positives = 23/44 (52%)
Query: 85 ALVNEVEESSGMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
A +N +++ G T LH A+ + + C +LL+ K A I G
Sbjct: 359 AQIN-IKDEEGATPLHKASFNGHSSCAKLLVDKGAPICIVDSQG 401
Score = 47 (21.6 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 87 VNEVEESSGMTALHLAAESHTARCVELLLKKRA 119
VN ++ +G T LH A+ +A CV LL +A
Sbjct: 129 VNTKDDKNG-TPLHKASLFASAECVLYLLNGKA 160
>UNIPROTKB|F1M3H8 [details] [associations]
symbol:F1M3H8 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0005634 GO:GO:0000166 GO:GO:0032496 GO:GO:0006954
Gene3D:3.30.70.330 GO:GO:0017091 GO:GO:0070935
GeneTree:ENSGT00700000104255 IPI:IPI00777708
ProteinModelPortal:F1M3H8 PRIDE:F1M3H8 Ensembl:ENSRNOT00000061231
Uniprot:F1M3H8
Length = 194
Score = 138 (53.6 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 54/191 (28%), Positives = 82/191 (42%)
Query: 450 AANTCHTNLAFLNQEKQNASLESDEDISGTCEALLSMVDDNSNTERICSG----TKIEVC 505
AA+ C + N + + L + GT + +V+ + R C G + +E
Sbjct: 3 AASLCGVLIGEXNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSR-CFGFVTYSNVEEA 61
Query: 506 KYYESHSG-CIRGSKCFYALGEEQHRKMNPGMCMIHASTQEFKSKIFVGGLPFFLDSDSL 564
+ S + G+ + PG HA + K+FVGGL + L
Sbjct: 62 DAAMAASPHAVDGNTVELKRAVSREDSARPGA---HAKVK----KLFVGGLKGDVAEGDL 114
Query: 565 GGYFEKHFGPIEDARVAEFQTEKQS-VSRGFGFVTFKHEKSAAAAVQARFVTIMGKEVEI 623
+F + FG +E A + +KQS RGFGFV F+ +A A +F I G VE+
Sbjct: 115 IEHFSQ-FGAVEKAEII---ADKQSGKKRGFGFVYFQSHDAADKAAVVKFHPIQGHRVEV 170
Query: 624 KSAVPKEVLFA 634
K AVPKE + A
Sbjct: 171 KKAVPKEDIVA 181
>ZFIN|ZDB-GENE-030728-7 [details] [associations]
symbol:trpn1 "transient receptor potential cation
channel, subfamily N, member 1" species:7955 "Danio rerio"
[GO:0070588 "calcium ion transmembrane transport" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0005262
"calcium channel activity" evidence=IEA] [GO:0008381
"mechanically-gated ion channel activity" evidence=ISS] [GO:0007605
"sensory perception of sound" evidence=IMP] [GO:0050910 "detection
of mechanical stimulus involved in sensory perception of sound"
evidence=IMP] [GO:0006810 "transport" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR002110
InterPro:IPR002153 InterPro:IPR005821 Pfam:PF00023 Pfam:PF00520
PRINTS:PR01097 PRINTS:PR01415 PROSITE:PS50088 SMART:SM00248
ZFIN:ZDB-GENE-030728-7 GO:GO:0016021 eggNOG:COG0666 GO:GO:0005262
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0050910 HSSP:P20749 GO:GO:0008381
EMBL:AY313897 IPI:IPI00511505 RefSeq:NP_899192.1 UniGene:Dr.89462
ProteinModelPortal:Q7T1G6 STRING:Q7T1G6 TCDB:1.A.4.7.1 PRIDE:Q7T1G6
GeneID:368273 KEGG:dre:368273 CTD:368273 HOVERGEN:HBG066316
OrthoDB:EOG4W0XFW ChEMBL:CHEMBL1293245 NextBio:20812843
Uniprot:Q7T1G6
Length = 1614
Score = 148 (57.2 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 83/364 (22%), Positives = 144/364 (39%)
Query: 291 PLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKTSMGLSQHILQNRIVGI 350
PL+LA G +V++ILL++ G +A+H A + H Q+ IV +
Sbjct: 582 PLLLAADQGHTEVVKILLQNNARVDVFDEE---GKAAIHLAAQRG-----H--QD-IVDV 630
Query: 351 LLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLKTIMMETPLFFAVKND 410
LL A V+ + K GLT LH++A +G+++ + L+ ++ ++ +TPL A +
Sbjct: 631 LLSQKAFVNAKTKQGLTPLHLSAQNGSARLVRLLVENHQASVDALSLRKQTPLHLAAMSG 690
Query: 411 HM-VCAEVLLRWGANSEVLNLRRERPIDFAKSQDMRFLLKAANTCHTNLAFLNQEKQNAS 469
+ VC+ LL A+ + R + P+ A D ++K L+ L E ++
Sbjct: 691 QLDVCSS-LLNLRADITATDSRGQTPLHLAAESDHSEVVKLFLRLRPELSTLANE-DGST 748
Query: 470 LESDEDISGTCEALLSMVDDNSNTERICSGTKIEVCKYY-ESHSGCIRGSKCFYALGEEQ 528
G+ + ++ N + +C + + G K G
Sbjct: 749 CTHIAAAKGSVSVIRELLMFNQGGVGTLNHKAHGLCPLHLAAAGGHAEVVKVLLEAGASV 808
Query: 529 HRKMNPGMCMIHASTQEFKSKIFV---GGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQT 585
+ GM +H + + + I G +P + S S G+ H
Sbjct: 809 TEEDAEGMTAVHLAAKHGHTHILEVLRGSVPLKIQS-SKTGFTALH-------------- 853
Query: 586 EKQSVSRGFGFVTFKHE--KSAAAAVQARFVTIMGKEVEIKSAVP-KEVLFAELQKQSAQ 642
V+ FG + F E A +++ F TI GK+ +IK P E F L S
Sbjct: 854 ----VAASFGQMNFVREILTKVPATIRSEFPTISGKD-DIKRQQPLAESGFTPLHLASQS 908
Query: 643 QQES 646
ES
Sbjct: 909 GHES 912
Score = 127 (49.8 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 40/135 (29%), Positives = 63/135 (46%)
Query: 285 DKKVGPPLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALH-CALKTSMGLSQHIL 343
DK PL+LA +AG+ ++ LL S+ G++ALH C + + +++
Sbjct: 148 DKNGCLPLLLAAEAGNVGIVRELLSSQSEPQIRAAKTANGDTALHICCRRRDVEMAK--- 204
Query: 344 QNRIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLKTIMMETPL 403
IL++ GA QN G T LHIAA G+ L+ L + + N+ M +PL
Sbjct: 205 ------ILVEFGANPDSQNDEGQTPLHIAAHEGDENMLKFLYLCKANA-NISDKMDRSPL 257
Query: 404 FFAVKNDHMVCAEVL 418
A + H E+L
Sbjct: 258 HIAAERGHTNVVEIL 272
Score = 66 (28.3 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 94 SGMTALHLAAE-SHTARCVELLLKKRARTDIRSKDG 128
SG LH AA+ HTA V+ LL+K A D ++DG
Sbjct: 319 SGAVCLHAAAKRGHTA-VVKALLQKGAHVDAAARDG 353
Score = 57 (25.1 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 13/42 (30%), Positives = 24/42 (57%)
Query: 87 VNEVEESSGMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
+N+ +G + L LAA+ V++LL+ AR D+ ++G
Sbjct: 572 INK-HSKNGWSPLLLAADQGHTEVVKILLQNNARVDVFDEEG 612
Score = 55 (24.4 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 90 VEESSGMTALHLAAESHTARCVELLLKK-RARTDIRSKDG 128
+ + + LH+AAE VE+L +K R+ R+KDG
Sbjct: 248 ISDKMDRSPLHIAAERGHTNVVEILTEKFRSCVLARTKDG 287
Score = 55 (24.4 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 15/44 (34%), Positives = 25/44 (56%)
Query: 85 ALVNEVEESSGMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
A VN E+ +G TALH+AA + + + L+++ RS+ G
Sbjct: 412 AEVN-AEQENGETALHVAARHGSLQMIRALIQEGGDPRWRSRVG 454
Score = 54 (24.1 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 95 GMTALHLAAESHTARCVELLLKKRARTDIR 124
G TALH+A E+ + V++LL A +R
Sbjct: 353 GQTALHIAVENCRPQVVQMLLGFGAHVQLR 382
Score = 54 (24.1 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 13/40 (32%), Positives = 21/40 (52%)
Query: 89 EVEESSGMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
+ +E SGM+ L LA ++ LL+ A ++KDG
Sbjct: 42 QCDEESGMSLLMLAVRESRLSVLDRLLELGANPSDKTKDG 81
Score = 49 (22.3 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 19/74 (25%), Positives = 28/74 (37%)
Query: 53 QTAIVTKLLRVSCIFDSVSCATSLVNGDLGPVALVNEVEESSGMTALHLAAESHTARCVE 112
+TA L + C V A LV P + + G T LH+AA ++
Sbjct: 183 KTANGDTALHICCRRRDVEMAKILVEFGANP-----DSQNDEGQTPLHIAAHEGDENMLK 237
Query: 113 LLLKKRARTDIRSK 126
L +A +I K
Sbjct: 238 FLYLCKANANISDK 251
Score = 48 (22.0 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 95 GMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
G +ALH+AA V+LL++K TD S G
Sbjct: 81 GRSALHIAAAHSKDEIVKLLVRK---TDPNSPAG 111
Score = 47 (21.6 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 9/42 (21%), Positives = 21/42 (50%)
Query: 87 VNEVEESSGMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
+ + ++G TALH+ ++L++ A D ++ +G
Sbjct: 179 IRAAKTANGDTALHICCRRRDVEMAKILVEFGANPDSQNDEG 220
Score = 47 (21.6 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 17/59 (28%), Positives = 26/59 (44%)
Query: 71 SCATSLVNGDLGPVALVNEVEESSGMTALHLAAE-SHTARCVELLLKKRARTDIRSKDG 128
+C +V LG A V + T LH++A R E+LLK A + ++G
Sbjct: 363 NCRPQVVQMLLGFGAHVQLRGGKAQETPLHISARVKEGERAAEMLLKSGAEVNAEQENG 421
Score = 45 (20.9 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 10/13 (76%), Positives = 10/13 (76%)
Query: 95 GMTALHLAAESHT 107
G TALHLAAE T
Sbjct: 497 GETALHLAAELRT 509
Score = 40 (19.1 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 92 ESSGMTALHLAAESHTARCVELLLKKRARTDIRS 125
+ +G L LAAE+ V LL ++ IR+
Sbjct: 148 DKNGCLPLLLAAEAGNVGIVRELLSSQSEPQIRA 181
>UNIPROTKB|F1NJR5 [details] [associations]
symbol:Gga.55799 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007165 "signal transduction" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0006779
"porphyrin-containing compound biosynthetic process" evidence=IEA]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IEA]
[GO:0014731 "spectrin-associated cytoskeleton" evidence=IEA]
[GO:0015672 "monovalent inorganic cation transport" evidence=IEA]
[GO:0030507 "spectrin binding" evidence=IEA] [GO:0030863 "cortical
cytoskeleton" evidence=IEA] [GO:0048821 "erythrocyte development"
evidence=IEA] [GO:0051117 "ATPase binding" evidence=IEA]
[GO:0072661 "protein targeting to plasma membrane" evidence=IEA]
InterPro:IPR000488 Pfam:PF00531 InterPro:IPR002110 Pfam:PF00023
PRINTS:PR01415 PROSITE:PS50017 PROSITE:PS50088 SMART:SM00005
SMART:SM00248 GO:GO:0005886 GO:GO:0007165 GO:GO:0030863
GO:GO:0014731 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0006779 GO:GO:0006888
Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986 GO:GO:0015672
GO:GO:0072661 InterPro:IPR000906 Pfam:PF00791 SMART:SM00218
PROSITE:PS51145 GeneTree:ENSGT00700000104348 EMBL:AADN02054821
EMBL:AADN02054822 EMBL:AADN02054823 EMBL:AADN02054824
EMBL:AADN02054825 EMBL:AADN02054826 IPI:IPI00814301
Ensembl:ENSGALT00000005683 ArrayExpress:F1NJR5 Uniprot:F1NJR5
Length = 1895
Score = 155 (59.6 bits), Expect = 2.7e-07, Sum P(3) = 2.7e-07
Identities = 48/166 (28%), Positives = 78/166 (46%)
Query: 275 FGAVANGSCTDKKVGPPLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKT 334
+GA AN PL LA+Q G D++ +L + G + LH L
Sbjct: 653 YGASANAESVQGVT--PLHLASQEGHTDMVALLFSKQANGNLGNKS---GLTPLH--LVA 705
Query: 335 SMGLSQHILQNRIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINL 394
G H+ + +L+KHG V ++G T+LHIA+ GN + ++ L++ + D +N
Sbjct: 706 QEG---HV---PVADVLVKHGVTVDATTRMGYTSLHIASHYGNIKLVKFLLQHQAD-VNA 758
Query: 395 KTIMMETPLFFAVKNDHMVCAEVLLRWGANSEVLNLRRERPIDFAK 440
KT + TPL A + H +LL+ GA+ ++ P+ AK
Sbjct: 759 KTKLGYTPLHQAAQQGHTDVVTLLLKHGASPNEISTNGTTPLAIAK 804
Score = 72 (30.4 bits), Expect = 2.7e-07, Sum P(3) = 2.7e-07
Identities = 24/79 (30%), Positives = 41/79 (51%)
Query: 49 NADQQTAIVTKLLRVSCIFDSVSCATSLVNGDLGPVALVNEVEESSGMTALHLAAESHTA 108
NAD + L ++ ++++S A L+N A VN ++ G+T LH+A+
Sbjct: 231 NADVLSKTGFTPLHIAAHYENLSVAQLLLNRG----ASVNFTPQN-GITPLHIASRRGNI 285
Query: 109 RCVELLLKKRARTDIRSKD 127
V LLL + A+ + R+KD
Sbjct: 286 IMVRLLLDRGAQIETRTKD 304
Score = 64 (27.6 bits), Expect = 4.2e-06, Sum P(4) = 4.2e-06
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 94 SGMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
+G T LH+A + + R +ELLLK A D ++ G
Sbjct: 403 NGFTPLHIACKKNHIRVMELLLKTGASIDAVTESG 437
Score = 61 (26.5 bits), Expect = 8.2e-06, Sum P(4) = 8.2e-06
Identities = 14/44 (31%), Positives = 25/44 (56%)
Query: 85 ALVNEVEESSGMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
A VN + G T L++AA+ + V+ LL+ A ++ ++DG
Sbjct: 135 ANVN-AQSQKGFTPLYMAAQENHLEVVKFLLENGANQNVATEDG 177
Score = 60 (26.2 bits), Expect = 1.0e-05, Sum P(4) = 1.0e-05
Identities = 14/25 (56%), Positives = 18/25 (72%)
Query: 94 SGMTALHLAA-ESHTARCVELLLKK 117
+G+ ALHLA+ E HT VELL K+
Sbjct: 77 NGLNALHLASKEGHTKMVVELLHKE 101
Score = 60 (26.2 bits), Expect = 1.0e-05, Sum P(4) = 1.0e-05
Identities = 19/58 (32%), Positives = 28/58 (48%)
Query: 73 ATSLVNGDLGPVA-LVNEVEESS-GMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
A +L G VA L+N + + ALH+AA + R +LL+ D+ SK G
Sbjct: 182 AVALQQGHENVVAHLINYGTKGKVRLPALHIAARNDDTRTAAVLLQNDPNADVLSKTG 239
Score = 59 (25.8 bits), Expect = 1.3e-05, Sum P(4) = 1.3e-05
Identities = 11/34 (32%), Positives = 20/34 (58%)
Query: 89 EVEESSGMTALHLAAESHTARCVELLLKKRARTD 122
+ + +G++ +H+AA+ CV LLL+ A D
Sbjct: 332 QAKTKNGLSPIHMAAQGDHLDCVRLLLQYSAEID 365
Score = 58 (25.5 bits), Expect = 1.6e-05, Sum P(4) = 1.6e-05
Identities = 19/68 (27%), Positives = 30/68 (44%)
Query: 61 LRVSCIFDSVSCATSLVNGDLGPVALVNEVEESSGMTALHLAAESHTARCVELLLKKRAR 120
L ++ D A L+ D P A +V +G T LH+AA +LLL + A
Sbjct: 210 LHIAARNDDTRTAAVLLQND--PNA---DVLSKTGFTPLHIAAHYENLSVAQLLLNRGAS 264
Query: 121 TDIRSKDG 128
+ ++G
Sbjct: 265 VNFTPQNG 272
Score = 54 (24.1 bits), Expect = 3.9e-05, Sum P(4) = 3.9e-05
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 89 EVEESSGMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
E +T LH AA + R E+LL A ++K+G
Sbjct: 299 ETRTKDELTPLHCAARNGHVRIAEILLDHGAPIQAKTKNG 338
Score = 53 (23.7 bits), Expect = 4.8e-05, Sum P(4) = 4.8e-05
Identities = 12/33 (36%), Positives = 21/33 (63%)
Query: 96 MTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
+T LH+AA R +LL++K A+ + R+ +G
Sbjct: 372 LTPLHVAAHCGHHRVAKLLVEKGAKPNSRALNG 404
Score = 52 (23.4 bits), Expect = 6.0e-05, Sum P(4) = 6.0e-05
Identities = 18/57 (31%), Positives = 26/57 (45%)
Query: 61 LRVSCIFDSVSCATSLVNGDLGPVALVNEVEESSGMTALHLAAESHTARCVELLLKK 117
L V+ + V A L+ D P A +G+T LH+A + V+LLL K
Sbjct: 569 LHVAAKYGKVDVAELLLVHDAHPNAA-----GKNGLTPLHVAVHHNNLEIVKLLLPK 620
Score = 51 (23.0 bits), Expect = 7.5e-05, Sum P(4) = 7.5e-05
Identities = 21/62 (33%), Positives = 28/62 (45%)
Query: 71 SCATS----LVNGDLGPVALVNEVEESSGMTALHLAAESHTARCVELLLKKRARTDIRSK 126
SCAT L+ L PV + + G T LH+AA+ ELLL A + K
Sbjct: 539 SCATVYICILLIIPLHPV--MGCLSPQKGFTPLHVAAKYGKVDVAELLLVHDAHPNAAGK 596
Query: 127 DG 128
+G
Sbjct: 597 NG 598
Score = 49 (22.3 bits), Expect = 0.00012, Sum P(4) = 0.00012
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 86 LVNEVEESSGMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
+V E G TALH+AA + V L+ A + +S+ G
Sbjct: 102 IVLETTTKKGNTALHIAALAGQQDVVRELVNYGANVNAQSQKG 144
Score = 48 (22.0 bits), Expect = 0.00014, Sum P(4) = 0.00014
Identities = 14/39 (35%), Positives = 23/39 (58%)
Query: 85 ALVNEVEESSGMTALHLAAESHTARCVELLLKKRARTDI 123
A ++ V ES G+T LH+AA V+ LL++ A ++
Sbjct: 428 ASIDAVTES-GLTPLHVAAFMGHLPIVKTLLQRGASPNV 465
Score = 45 (20.9 bits), Expect = 0.00028, Sum P(4) = 0.00028
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 94 SGMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
+G T LH+AA+ + LL+ A + S G
Sbjct: 630 NGYTPLHIAAKQNQMEVASSLLQYGASANAESVQG 664
Score = 44 (20.5 bits), Expect = 0.00035, Sum P(4) = 0.00035
Identities = 9/32 (28%), Positives = 19/32 (59%)
Query: 97 TALHLAAESHTARCVELLLKKRARTDIRSKDG 128
T LH+AA + + L++ +A+ + ++K G
Sbjct: 472 TPLHMAARAGHMDVAKYLIQNKAKINAKAKVG 503
Score = 40 (19.1 bits), Expect = 7.1e-07, Sum P(4) = 7.1e-07
Identities = 19/88 (21%), Positives = 37/88 (42%)
Query: 779 GYSKLSDFLRTLPDLCHVKAGPIGKNGSPNHMVLVPSPPK--------QKWGALQLSKNG 830
GY+ L D L + L ++ P+ + N + ++ + P + +Q+ +G
Sbjct: 1552 GYASLQDELLSPASLHYMLPSPLRADQYWNEVAIMDAIPMAATEQDALMEMSDMQVWSSG 1611
Query: 831 NPSSPVNSASDSNECDR-NDSKSPQDLR 857
S V + S EC + DS + + R
Sbjct: 1612 LTPSLVTAEDSSLECSKAEDSDATSEGR 1639
Score = 38 (18.4 bits), Expect = 7.1e-07, Sum P(4) = 7.1e-07
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 608 AVQARFVTIMGKEVEIKSAVPKEVLFAEL 636
A F T++ KE+ + K V+FA++
Sbjct: 1259 AEAVHFATVLYKELTAVPYMAKFVVFAKM 1287
Score = 37 (18.1 bits), Expect = 2.7e-07, Sum P(3) = 2.7e-07
Identities = 13/46 (28%), Positives = 23/46 (50%)
Query: 523 ALGEEQHRKMNPGMCMIHASTQE---FKSKIFVGGLPFFLDSDSLG 565
A G+EQ + + P + ++ S+ E ++ + GG P DS G
Sbjct: 1776 AQGQEQEQVLAPDVELMRVSSTEDSDWQPQHPAGGWPEEPDSRCFG 1821
>ZFIN|ZDB-GENE-070212-1 [details] [associations]
symbol:dazap1 "DAZ associated protein 1" species:7955
"Danio rerio" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
ZFIN:ZDB-GENE-070212-1 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 OMA:HNLDGRN GeneTree:ENSGT00700000104255
EMBL:BX255969 EMBL:BX323045 IPI:IPI00961610
Ensembl:ENSDART00000104362 Bgee:F1QBG2 Uniprot:F1QBG2
Length = 407
Score = 160 (61.4 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 37/82 (45%), Positives = 49/82 (59%)
Query: 549 KIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKHEKSAAAA 608
KIFVGG+P L YF + FG + + V + EKQ RGFGF+TF+ E+S A
Sbjct: 114 KIFVGGIPHNCGEAELRDYFNR-FGVVTEV-VMIYDAEKQR-PRGFGFITFEAEQSVDQA 170
Query: 609 VQARFVTIMGKEVEIKSAVPKE 630
V F IMGK+VE+K A P++
Sbjct: 171 VNMHFHDIMGKKVEVKKAEPRD 192
Score = 37 (18.1 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 806 SPNHMVLVPSPPKQKWGALQ 825
SP + LV +PP +GA Q
Sbjct: 262 SPFNAFLVAAPPTGGFGAPQ 281
>UNIPROTKB|F1MY81 [details] [associations]
symbol:ANK1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0072661 "protein targeting to plasma membrane"
evidence=IEA] [GO:0051117 "ATPase binding" evidence=IEA]
[GO:0048821 "erythrocyte development" evidence=IEA] [GO:0030863
"cortical cytoskeleton" evidence=IEA] [GO:0030507 "spectrin
binding" evidence=IEA] [GO:0015672 "monovalent inorganic cation
transport" evidence=IEA] [GO:0014731 "spectrin-associated
cytoskeleton" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0006779
"porphyrin-containing compound biosynthetic process" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] InterPro:IPR002110
Pfam:PF00023 PRINTS:PR01415 PROSITE:PS50088 SMART:SM00248
GO:GO:0005886 GO:GO:0030863 GO:GO:0014731 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
GO:GO:0006779 GO:GO:0006888 GO:GO:0048821 GO:GO:0015672
GO:GO:0072661 InterPro:IPR000906 Pfam:PF00791 SMART:SM00218
PROSITE:PS51145 GeneTree:ENSGT00700000104348 EMBL:DAAA02060935
IPI:IPI00868501 Ensembl:ENSBTAT00000004242 OMA:DIELMEG
Uniprot:F1MY81
Length = 1136
Score = 142 (55.0 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 46/166 (27%), Positives = 76/166 (45%)
Query: 275 FGAVANGSCTDKKVGPPLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKT 334
+G AN PL LA Q G +++ +LL + G + LH L
Sbjct: 623 YGGSANAESVQGVT--PLHLAAQEGHAEMVALLLSKQANGNLGNKS---GLTPLH--LVA 675
Query: 335 SMGLSQHILQNRIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINL 394
G HI + +L+KHG V ++G T LH+A+ GN + ++ L++ + D +N
Sbjct: 676 QEG---HI---PVADVLIKHGVTVDATTRMGYTPLHVASHYGNIKLVKFLLQHKAD-VNA 728
Query: 395 KTIMMETPLFFAVKNDHMVCAEVLLRWGANSEVLNLRRERPIDFAK 440
KT + +PL A + H +LL+ GA+ ++ P+ AK
Sbjct: 729 KTKLGYSPLHQAAQQGHTDIVTLLLKHGASPNEVSSNGTTPLAIAK 774
Score = 130 (50.8 bits), Expect = 5.5e-06, Sum P(2) = 5.5e-06
Identities = 54/179 (30%), Positives = 82/179 (45%)
Query: 291 PLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKTSMGLSQHILQNRIVGI 350
PL +A G V ++LL G + LH A K + HI R++ +
Sbjct: 340 PLHVAAHCGHHRVAKVLLDK---GAKPNSRALNGFTPLHIACKKN-----HI---RVMEL 388
Query: 351 LLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLKTIMMETPLFFAVKND 410
LLK GA + + GLT LH+A+ G+ ++ L+++E N+ + +ETPL A +
Sbjct: 389 LLKMGASIDAVTESGLTPLHVASFMGHLPIVKSLLQREASP-NVSNVKVETPLHMAARAG 447
Query: 411 HMVCAEVLLRWGANSEVLNLRRERPIDFAKSQDMRFLLKAANTCHTNLAFLNQEKQNAS 469
H A+ LL+ N +N + AK D L AA HTN+ L E NA+
Sbjct: 448 HTEVAKYLLQ---NKAKVNAK-------AKD-DQTPLHCAARIGHTNMVKLLLEN-NAN 494
Score = 116 (45.9 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 51/184 (27%), Positives = 81/184 (44%)
Query: 279 ANGSCTDKKVGPPLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKTSMGL 338
A+ + ++ KV PL +A +AG +V + LL++K + LHCA + +G
Sbjct: 427 ASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDD---QTPLHCAAR--IG- 480
Query: 339 SQHILQNRIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPD--CINLKT 396
H +V +LL++ A + G T LHIAA G+ + L+ KE C+ K
Sbjct: 481 --H---TNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETALALLEKEASQTCMTKKG 535
Query: 397 IMMETPLFFAVKNDHMVCAEVLLRWGANSEVLNLRRERPIDFAKSQD----MRFLLKAAN 452
TPL A K + AE+LL A+ P+ A + +R LL
Sbjct: 536 F---TPLHVAAKYGKVRMAELLLEHDAHPNAAGKSGLTPLHVAVHHNHLDVVRLLLPRGG 592
Query: 453 TCHT 456
+ H+
Sbjct: 593 SPHS 596
Score = 68 (29.0 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 20/67 (29%), Positives = 37/67 (55%)
Query: 61 LRVSCIFDSVSCATSLVNGDLGPVALVNEVEESSGMTALHLAAESHTARCVELLLKKRAR 120
L ++ +++++ A L+N A VN ++ G+T LH+A+ V LLL + A+
Sbjct: 209 LHIAAHYENLNVAQLLLNRG----ASVNFTPQN-GITPLHIASRRGNVIMVRLLLDRGAQ 263
Query: 121 TDIRSKD 127
+ R+KD
Sbjct: 264 IETRTKD 270
Score = 64 (27.6 bits), Expect = 7.8e-07, Sum P(2) = 7.8e-07
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 94 SGMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
+G T LH+A + + R +ELLLK A D ++ G
Sbjct: 369 NGFTPLHIACKKNHIRVMELLLKMGASIDAVTESG 403
Score = 62 (26.9 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 18/68 (26%), Positives = 29/68 (42%)
Query: 61 LRVSCIFDSVSCATSLVNGDLGPVALVNEVEESSGMTALHLAAESHTARCVELLLKKRAR 120
L ++ D A L+ D P +V +G T LH+AA +LLL + A
Sbjct: 176 LHIAARNDDTRTAAVLLQNDPNP-----DVLSKTGFTPLHIAAHYENLNVAQLLLNRGAS 230
Query: 121 TDIRSKDG 128
+ ++G
Sbjct: 231 VNFTPQNG 238
Score = 61 (26.5 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 14/44 (31%), Positives = 25/44 (56%)
Query: 85 ALVNEVEESSGMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
A VN + G T L++AA+ + V+ LL+ A ++ ++DG
Sbjct: 101 ANVN-AQSQKGFTPLYMAAQENHLEVVKFLLENGANQNVATEDG 143
Score = 60 (26.2 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 11/34 (32%), Positives = 20/34 (58%)
Query: 89 EVEESSGMTALHLAAESHTARCVELLLKKRARTD 122
+ + +G++ +H+AA+ CV LLL+ A D
Sbjct: 298 QAKTKNGLSPIHMAAQGDHLDCVRLLLQYNAEID 331
Score = 59 (25.8 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 14/34 (41%), Positives = 18/34 (52%)
Query: 95 GMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
G T LH+AA+ R ELLL+ A + K G
Sbjct: 535 GFTPLHVAAKYGKVRMAELLLEHDAHPNAAGKSG 568
Score = 59 (25.8 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 19/58 (32%), Positives = 28/58 (48%)
Query: 73 ATSLVNGDLGPVA-LVNEVEESS-GMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
A +L G VA L+N + + ALH+AA + R +LL+ D+ SK G
Sbjct: 148 AVALQQGHENVVAHLINYGTKGKVRLPALHIAARNDDTRTAAVLLQNDPNPDVLSKTG 205
Score = 54 (24.1 bits), Expect = 8.2e-06, Sum P(2) = 8.2e-06
Identities = 17/60 (28%), Positives = 30/60 (50%)
Query: 72 CATSLVNGDLGPVALVNEVEES----SGMTALHLAA-ESHTARCVELLLKKRARTDIRSK 126
CA + + ++ + L N + +G T LH+AA E H + LL K+ ++T + K
Sbjct: 475 CAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETALALLEKEASQTCMTKK 534
Score = 54 (24.1 bits), Expect = 8.2e-06, Sum P(2) = 8.2e-06
Identities = 17/67 (25%), Positives = 31/67 (46%)
Query: 61 LRVSCIFDSVSCATSLVNGDLGPVALVNEVEESSGMTALHLAAESHTARCVELLLKKRAR 120
L V+ + SL+ + P +VE T LH+AA + + LL+ +A+
Sbjct: 407 LHVASFMGHLPIVKSLLQREASPNVSNVKVE-----TPLHMAARAGHTEVAKYLLQNKAK 461
Query: 121 TDIRSKD 127
+ ++KD
Sbjct: 462 VNAKAKD 468
Score = 51 (23.0 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 94 SGMTALHLAA-ESHTARCVELLLKK 117
+G+ LHLA+ E H VELL K+
Sbjct: 43 NGLNGLHLASKEGHVKMVVELLHKE 67
Score = 51 (23.0 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 96 MTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
+T LH+AA R ++LL K A+ + R+ +G
Sbjct: 338 LTPLHVAAHCGHHRVAKVLLDKGAKPNSRALNG 370
Score = 51 (23.0 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 89 EVEESSGMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
E +T LH AA + R E+LL A ++K+G
Sbjct: 265 ETRTKDELTPLHCAARNGHLRISEILLDHGAPIQAKTKNG 304
Score = 51 (23.0 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 22/74 (29%), Positives = 31/74 (41%)
Query: 47 LDNADQQTAIVTK---LLRVSCIFDSVSCATSLVNGDLGPVALVNEVEESSGMTALHLAA 103
L+ QT + K L V+ + V A L+ D P A SG+T LH+A
Sbjct: 522 LEKEASQTCMTKKGFTPLHVAAKYGKVRMAELLLEHDAHPNAA-----GKSGLTPLHVAV 576
Query: 104 ESHTARCVELLLKK 117
+ V LLL +
Sbjct: 577 HHNHLDVVRLLLPR 590
Score = 49 (22.3 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 13/43 (30%), Positives = 21/43 (48%)
Query: 86 LVNEVEESSGMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
++ E G TALH+AA + V L+ A + +S+ G
Sbjct: 68 IILETTTKKGNTALHIAALAGQDEVVRELVNYGANVNAQSQKG 110
Score = 46 (21.3 bits), Expect = 5.4e-05, Sum P(2) = 5.4e-05
Identities = 13/39 (33%), Positives = 23/39 (58%)
Query: 85 ALVNEVEESSGMTALHLAAESHTARCVELLLKKRARTDI 123
A ++ V ES G+T LH+A+ V+ LL++ A ++
Sbjct: 394 ASIDAVTES-GLTPLHVASFMGHLPIVKSLLQREASPNV 431
Score = 46 (21.3 bits), Expect = 5.4e-05, Sum P(2) = 5.4e-05
Identities = 16/45 (35%), Positives = 22/45 (48%)
Query: 85 ALVNEVEESSGMTALHLAAE-SHTARCVELLLKKRARTDIRSKDG 128
A VN + T LH AA HT V+LLL+ A ++ + G
Sbjct: 460 AKVN-AKAKDDQTPLHCAARIGHT-NMVKLLLENNANPNLATTAG 502
Score = 41 (19.5 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 10/35 (28%), Positives = 16/35 (45%)
Query: 94 SGMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
+G T LH+AA+ + LL+ + S G
Sbjct: 600 NGYTPLHIAAKQNQLEVARSLLQYGGSANAESVQG 634
>WB|WBGene00019249 [details] [associations]
symbol:H28G03.1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00390000002308 EMBL:FO081568 RefSeq:NP_741783.1
UniGene:Cel.17692 ProteinModelPortal:H2L0D0 SMR:H2L0D0 PRIDE:H2L0D0
EnsemblMetazoa:H28G03.1a.1 EnsemblMetazoa:H28G03.1a.2 GeneID:180791
KEGG:cel:CELE_H28G03.1 CTD:180791 WormBase:H28G03.1a OMA:HIVNERK
Uniprot:H2L0D0
Length = 336
Score = 149 (57.5 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 40/103 (38%), Positives = 56/103 (54%)
Query: 528 QHRKMNPGMCMIHASTQEFKSKIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEK 587
Q ++M G H S + + K+F+GGL + LG YF + +GP+ DA V K
Sbjct: 52 QFQQMGMGQYQ-HDSPPQLR-KLFIGGLSHDTTDEQLGNYFSQ-WGPVVDAIVIRDPNTK 108
Query: 588 QSVSRGFGFVTFKHEKSAAAAVQARFVTIMGKEVEIKSAVPKE 630
S RGFGFVTF SA +A+ R + GK V+ K A+P+E
Sbjct: 109 HS--RGFGFVTFASIFSAESAMNDRPHKLGGKTVDSKRAIPRE 149
>UNIPROTKB|F1SQJ4 [details] [associations]
symbol:ASB3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0035556 "intracellular signal transduction" evidence=IEA]
InterPro:IPR002110 InterPro:IPR001496 Pfam:PF00023 Pfam:PF07525
PRINTS:PR01415 PROSITE:PS50088 PROSITE:PS50225 SMART:SM00248
SMART:SM00969 UniPathway:UPA00143 GO:GO:0035556 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
GO:GO:0016567 GO:GO:0005622 GeneTree:ENSGT00530000063050 CTD:51130
KO:K10325 OMA:HLAYCLK EMBL:CU463868 RefSeq:NP_001191971.1
UniGene:Ssc.27198 Ensembl:ENSSSCT00000009215 GeneID:100518009
KEGG:ssc:100518009 Uniprot:F1SQJ4
Length = 525
Score = 140 (54.3 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 47/153 (30%), Positives = 73/153 (47%)
Query: 277 AVANGSCTDKKVGPPLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKTSM 336
A A+ + T + PL LA + G DV+ +LL+ G+ ++ C T
Sbjct: 101 AGADPNATTLEETTPLFLAVENGQIDVLRLLLR--------YGANVNGSHSM-CGWNT-- 149
Query: 337 GLSQHILQNR--IVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINL 394
L Q Q I+ +LLK GA Q+ G+T L +AA G ++L LI + +N
Sbjct: 150 -LHQATFQENAEIIKLLLKKGANKECQDDFGITPLFVAAQYGKLESLSILISSGAN-VNC 207
Query: 395 KTIMMETPLFFAVKNDHMVCAEVLLRWGANSEV 427
+ + TPLF A + H C E+LL GA+ ++
Sbjct: 208 QALDKATPLFIAAQEGHTKCVELLLSSGADPDL 240
Score = 60 (26.2 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 25/92 (27%), Positives = 43/92 (46%)
Query: 28 EDDKKQLINVSKRHFIDNSLDNADQQTAIVTKLLRVSCIFDSVSCATSLVNGDLGPVALV 87
E + K L + KR S+D AD + + + + +SV C L++ D +
Sbjct: 20 EGNVKVLRKLLKR---GRSVDVADNRGWMP---IHEAAYHNSVECLQMLIHADSSENYIK 73
Query: 88 NEVEESSGMTALHLAAESHTARCVELLLKKRA 119
+ E G +ALHLAA + +++LL+ A
Sbjct: 74 TKTFE--GFSALHLAASQGHWKIIQILLEAGA 103
>WB|WBGene00006616 [details] [associations]
symbol:trp-4 species:6239 "Caenorhabditis elegans"
[GO:0005262 "calcium channel activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0070588 "calcium ion transmembrane
transport" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0055085
"transmembrane transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR002110 InterPro:IPR002153
InterPro:IPR005821 Pfam:PF00023 Pfam:PF00520 PRINTS:PR01097
PRINTS:PR01415 PROSITE:PS50088 SMART:SM00248 GO:GO:0016021
eggNOG:COG0666 GO:GO:0005262 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
GeneTree:ENSGT00700000104010 EMBL:AL132902 RefSeq:NP_493429.2
UniGene:Cel.28398 ProteinModelPortal:Q9GRV5 SMR:Q9GRV5
EnsemblMetazoa:Y71A12B.4 GeneID:190574 KEGG:cel:CELE_Y71A12B.4
UCSC:Y71A12B.4 CTD:190574 WormBase:Y71A12B.4 HOGENOM:HOG000010235
InParanoid:Q9GRV5 OMA:HNAVIDI NextBio:946242 Uniprot:Q9GRV5
Length = 1924
Score = 146 (56.5 bits), Expect = 4.7e-07, Sum P(2) = 4.7e-07
Identities = 58/213 (27%), Positives = 91/213 (42%)
Query: 276 GAVANGSCTDKKVG-PPLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKT 334
GAV K G PL+ A G V ILLK G +ALH A
Sbjct: 874 GAVQIVQNKQSKNGWSPLLEACARGHSGVANILLKHHARIDVFDEM---GRTALHLA--- 927
Query: 335 SMGLSQHILQNRIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINL 394
+ H+ +V +LL+H A V+ ++K G LH+AA G+ + + L++ +
Sbjct: 928 --AFNGHL---SLVHLLLQHKAFVNSKSKTGEAPLHLAAQHGHVKVVNVLVQDHGAALEA 982
Query: 395 KTIMMETPLFFAVKNDHMVCAEVLLRWGANSEVLNLRRERPIDFAKSQDMRFLLKAANTC 454
T+ +T L FA K + ++ LL GAN + + + P+ A D ++K
Sbjct: 983 ITLDNQTALHFAAKFGQLAVSQTLLALGANPNARDDKGQTPLHLAAENDFPDVVKL---- 1038
Query: 455 HTNLAFLNQEKQNASLESDEDISG-TCEALLSM 486
FL N S+ + D +G TC + +M
Sbjct: 1039 -----FLKMRNNNRSVLTAIDHNGFTCAHIAAM 1066
Score = 67 (28.6 bits), Expect = 4.7e-07, Sum P(2) = 4.7e-07
Identities = 20/57 (35%), Positives = 28/57 (49%)
Query: 75 SLVNGDLGPVALVNEVEESSGMTALHLAAESHTAR---CVELLLKKRARTDIRSKDG 128
S+V LG A ++ G TALH+AA + A C +LLK + D+ DG
Sbjct: 673 SVVETLLGSGADIHVKGGELGQTALHIAASLNGAESRDCAMMLLKSGGQPDVAQMDG 729
Score = 67 (28.6 bits), Expect = 4.7e-07, Sum P(2) = 4.7e-07
Identities = 21/61 (34%), Positives = 29/61 (47%)
Query: 68 DSVSCATSLVNGDLGPVALVNEVEESSGMTALHLAAESHTARCVELLLKKRARTDIRSKD 127
+S CA L+ P +V + G T LH+AA S + LLL + A + I SK
Sbjct: 707 ESRDCAMMLLKSGGQP-----DVAQMDGETCLHIAARSGNKDIMRLLLDENADSKISSKI 761
Query: 128 G 128
G
Sbjct: 762 G 762
Score = 63 (27.2 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 13/37 (35%), Positives = 23/37 (62%)
Query: 92 ESSGMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
++ G TA LA ++ + V+ +++K AR D +KDG
Sbjct: 350 DNHGFTAFLLAVKAGKDQIVDKMIRKGARVDYSTKDG 386
Score = 57 (25.1 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 17/40 (42%), Positives = 20/40 (50%)
Query: 89 EVEESSGMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
+V TALH+A +S A VE LL A DI K G
Sbjct: 653 DVRTRDNYTALHVAVQSGKASVVETLLGSGA--DIHVKGG 690
Score = 53 (23.7 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 20/95 (21%), Positives = 39/95 (41%)
Query: 12 PSVTDLETTLIINSLLEDDKKQLINVSKRHFIDNSLDNADQQTAIVTKLLRVSCIFDSVS 71
P V ++ ++ K ++ + D+ + + +T + ++ SC F++ S
Sbjct: 722 PDVAQMDGETCLHIAARSGNKDIMRLLLDENADSKISSKIGETPL--QVAAKSCNFEAAS 779
Query: 72 CATSLVNGDLGPVALVNEVEE--SSGMTALHLAAE 104
++ L L V + G TALH AAE
Sbjct: 780 MILKHLSEVLTQEQLKEHVNHRTNDGFTALHYAAE 814
Score = 52 (23.4 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 13/38 (34%), Positives = 17/38 (44%)
Query: 91 EESSGMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
E+ G +HLA + VELLL + R DG
Sbjct: 453 EDGDGSLPIHLAFKFGNVNIVELLLSGPSDEQTRKADG 490
Score = 51 (23.0 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 12/38 (31%), Positives = 19/38 (50%)
Query: 90 VEESSGMTALHLAAESHTARCVELLLKKRARTDIRSKD 127
V+ G T LH AE ++++ K RA +I K+
Sbjct: 521 VQNRVGRTPLHEVAEVGDQNMLKIMFKLRADANIHDKE 558
Score = 50 (22.7 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 16/68 (23%), Positives = 32/68 (47%)
Query: 60 LLRVSCIFDSVSCATSLVNGDLGPVALVNEVEESSGMTALHLAAESHTARCVELLLKKRA 119
LL ++ S A + + + P+ + N+ G LH AA + V++L+ +
Sbjct: 596 LLHIAACSGHTSTALAFLKRGV-PLFMPNK----KGALGLHSAAAAGFNDVVKMLIARGT 650
Query: 120 RTDIRSKD 127
D+R++D
Sbjct: 651 NVDVRTRD 658
Score = 45 (20.9 bits), Expect = 8.4e-05, Sum P(2) = 8.4e-05
Identities = 12/40 (30%), Positives = 20/40 (50%)
Query: 90 VEESSGMTALHLAAESHTARCVELLLKKRART-DIRSKDG 128
+ + T +H+AAE VE L+ K + R++DG
Sbjct: 554 IHDKEDKTPVHVAAERGDTSMVESLIDKFGGSIRARTRDG 593
Score = 44 (20.5 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 27/92 (29%), Positives = 43/92 (46%)
Query: 31 KKQL-INV-----SKRHF--IDNSLDNADQQTAIV---TKLLRVSCIFDSVSCATSLVNG 79
KKQL I+V SK+ F + L++ DQ+ A + + ++ F +V+ L++G
Sbjct: 420 KKQLAIHVACERKSKKAFPIVKRILEDTDQRMAEDGDGSLPIHLAFKFGNVNIVELLLSG 479
Query: 80 DLGPVALVNEVEESSGMTALHLAAESHTARCV 111
P + +G T LHLAA S V
Sbjct: 480 ---PSDEQTRKADGNGDTLLHLAARSGNIEAV 508
Score = 41 (19.5 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 95 GMTALHLAAESHTARCVELLLKK 117
G A H+AA +EL+LK+
Sbjct: 386 GRNATHIAAMYSGVETLELILKR 408
Score = 39 (18.8 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 95 GMTALHLAAES-HTARCVELL 114
G T LH+AA S HT+ + L
Sbjct: 593 GSTLLHIAACSGHTSTALAFL 613
Score = 37 (18.1 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 8/29 (27%), Positives = 15/29 (51%)
Query: 88 NEVEESSGMTALHLAAESHTARCVELLLK 116
+++ G T L +AA+S ++LK
Sbjct: 755 SKISSKIGETPLQVAAKSCNFEAASMILK 783
>MGI|MGI:2145661 [details] [associations]
symbol:Ankrd28 "ankyrin repeat domain 28" species:10090 "Mus
musculus" [GO:0005575 "cellular_component" evidence=ND] [GO:0005634
"nucleus" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002110 Pfam:PF00023 PRINTS:PR01415
PROSITE:PS50088 SMART:SM00248 MGI:MGI:2145661 GO:GO:0005654
eggNOG:COG0666 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 CTD:23243 HOGENOM:HOG000033959
HOVERGEN:HBG067697 KO:K15502 OMA:DMLNDSD OrthoDB:EOG4NCMCR
EMBL:BC094609 EMBL:BC051456 IPI:IPI00405443 RefSeq:NP_001019775.1
UniGene:Mm.37660 ProteinModelPortal:Q505D1 SMR:Q505D1 IntAct:Q505D1
STRING:Q505D1 PhosphoSite:Q505D1 PaxDb:Q505D1 PRIDE:Q505D1
Ensembl:ENSMUST00000014640 GeneID:105522 KEGG:mmu:105522
UCSC:uc007sxz.1 GeneTree:ENSGT00700000104124 InParanoid:Q505D1
NextBio:357754 Bgee:Q505D1 CleanEx:MM_ANKRD28 Genevestigator:Q505D1
GermOnline:ENSMUSG00000014496 Uniprot:Q505D1
Length = 1053
Score = 117 (46.2 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 48/182 (26%), Positives = 76/182 (41%)
Query: 279 ANGSCTDKKVGPPLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKTSMGL 338
A +C DKK PL A +G V++ LL GN+ LH A
Sbjct: 197 AEVTCKDKKSYTPLHAAASSGMISVVKYLLD---LGVDMNEPNAYGNTPLHVACYNG--- 250
Query: 339 SQHILQNRIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQ-ALEDLIRKEPDCINLKTI 397
Q+ +V L+ GA V+Q+N+ G T LH AA S + LE L+ D +N+K+
Sbjct: 251 -----QDVVVNELIDCGANVNQKNEKGFTPLHFAAASTHGALCLELLVGNGAD-VNMKSK 304
Query: 398 MMETPLFFAVKNDHMVCAEVLLRWGANSEVLNLRRERPIDFAKSQDMRFLLKAANTCHTN 457
+TPL + ++ +++ GA + + P+ A L+ T +
Sbjct: 305 DGKTPLHMTALHGRFSRSQTIIQSGAVIDCEDKNGNTPLHIAARYGHELLINTLITSGAD 364
Query: 458 LA 459
A
Sbjct: 365 TA 366
Score = 112 (44.5 bits), Expect = 4.9e-07, Sum P(2) = 4.9e-07
Identities = 65/263 (24%), Positives = 117/263 (44%)
Query: 276 GAVANGSCTDKKVGPPL-ILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKT 334
G+ A+ + D++ PL AT D +E LL++ G +A+H +
Sbjct: 459 GSGASVNDLDERGCTPLHYAATSDTDGKCLEYLLRNDANPGIRDKQ---GYNAVHYSAAY 515
Query: 335 SMGLSQHILQNRI-VGILLKHGA---IVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPD 390
L ++ + + +L++ + N+ ++ LH+AA G+ QALE L++ D
Sbjct: 516 GHRLCLQLIASETPLDVLMETSGTDMLSDSDNRATISPLHLAAYHGHHQALEVLVQSLLD 575
Query: 391 CINLKTIMMETPLFFAVKNDHMVCAEVLLRWGANSEVLNLRRER-PIDFAKSQDMRFLLK 449
++++ TPL A H+ C +VL+ GA+ V + +R PI A +
Sbjct: 576 -LDVRNSSGRTPLDLAAFKGHVECVDVLINQGASILVKDYVLKRTPIHAAATN------- 627
Query: 450 AANTCHTNLAFLNQEKQNASLESDEDISGTCEALLSMVDDNSNTERICS----GTKIEVC 505
+ C L N E QNA +D +G +LS++ N +T+ + S G ++
Sbjct: 628 GHSEC-LRLLIGNAEPQNAV--DIQDGNGQTPLMLSVL--NGHTDCVYSLLNKGANVDAK 682
Query: 506 -KYYES--HSGCIRG-SKCFYAL 524
K+ + H G + G +C AL
Sbjct: 683 DKWGRTALHRGAVTGHEECVDAL 705
Score = 98 (39.6 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 53/194 (27%), Positives = 78/194 (40%)
Query: 291 PLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKTSMGLSQHILQNRIVGI 350
PL LA +G D LL S G + LH A + G + L +
Sbjct: 375 PLHLAALSGFSDCCRKLLSS---GFDIDTPDDFGRTCLHAA---AAGGNLECLN-----L 423
Query: 351 LLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLKTIMMETPLFFAVKND 410
LL GA ++++K G + LH AA + N Q L L+ +L TPL +A +D
Sbjct: 424 LLNTGADFNKKDKFGRSPLHYAAANCNYQCLFALVGSGASVNDLDERGC-TPLHYAATSD 482
Query: 411 -HMVCAEVLLRWGANSEVLNLRRERPIDFAKSQDMRFLLKAANTCHTNLAFLNQEKQNAS 469
C E LLR AN + + + + ++ + R L+ + T L L E
Sbjct: 483 TDGKCLEYLLRNDANPGIRDKQGYNAVHYSAAYGHRLCLQLIAS-ETPLDVL-METSGTD 540
Query: 470 LESDEDISGTCEAL 483
+ SD D T L
Sbjct: 541 MLSDSDNRATISPL 554
Score = 96 (38.9 bits), Expect = 4.9e-07, Sum P(2) = 4.9e-07
Identities = 34/96 (35%), Positives = 49/96 (51%)
Query: 34 LINVSKRHFIDNSLDNADQQTAIVTKLLRVSCIFDSVSCATSLVNGDLGPVALVNEVEES 93
+I+V K + +D +D ++ A L V+C L+ D G A VN+ E
Sbjct: 218 MISVVK-YLLDLGVD-MNEPNAYGNTPLHVACYNGQDVVVNELI--DCG--ANVNQKNEK 271
Query: 94 SGMTALHLAAES-HTARCVELLLKKRARTDIRSKDG 128
G T LH AA S H A C+ELL+ A +++SKDG
Sbjct: 272 -GFTPLHFAAASTHGALCLELLVGNGADVNMKSKDG 306
Score = 86 (35.3 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 28/95 (29%), Positives = 47/95 (49%)
Query: 333 KTSMGLSQHILQNRIVGILLKHG-AIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPD- 390
KT + ++ Q V +L+ A ++ Q+K TALH+A G G+ + ++ K D
Sbjct: 857 KTPLMMAAENGQTNTVEMLVSSASADLTLQDKSKNTALHLACGKGHETSALLILEKITDR 916
Query: 391 -CINLKTIMMETPLFFAVKNDHMVCAEVLLRWGAN 424
IN ++TPL A +N + + LL GA+
Sbjct: 917 NLINATNAALQTPLHVAARNGLTMVVQELLGKGAS 951
Score = 83 (34.3 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 35/133 (26%), Positives = 55/133 (41%)
Query: 291 PLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKTSMGLSQHILQNRIVGI 350
PL+L+ G D + LL G +ALH T H V
Sbjct: 656 PLMLSVLNGHTDCVYSLLNK---GANVDAKDKWGRTALHRGAVTG-----H---EECVDA 704
Query: 351 LLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLKTIMME----TPLFFA 406
LL+HGA ++ G T +H++A G+ L L++ ++ +++ T L +A
Sbjct: 705 LLQHGAKCLLRDSRGRTPIHLSAACGHIGVLGALLQSATS-VDANPAVVDNHGYTALHWA 763
Query: 407 VKNDHMVCAEVLL 419
N H C E+LL
Sbjct: 764 CYNGHETCVELLL 776
Score = 72 (30.4 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 27/95 (28%), Positives = 44/95 (46%)
Query: 32 KQLINVSKRHFIDNSLDNADQQTAIVTKLLRVSCIFDSVSCATSLVNGDLGPVALVNEVE 91
++ + + +H D + + + QT L ++ +V CA SLV P+ V
Sbjct: 87 EEAVQILLKHSADVNARDKNWQTP-----LHIAAANKAVKCAESLV-----PLLSNVNVS 136
Query: 92 ESSGMTALHLAAESHTARCVELLLKKRARTDIRSK 126
+ +G TALH AA S V+LLL + A + K
Sbjct: 137 DRAGRTALHHAAFSGHGEMVKLLLSRGANINAFDK 171
>MGI|MGI:2444029 [details] [associations]
symbol:Ankrd52 "ankyrin repeat domain 52" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002110 Pfam:PF00023 PRINTS:PR01415
PROSITE:PS50088 SMART:SM00248 MGI:MGI:2444029 eggNOG:COG0666
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 HOGENOM:HOG000033959 HOVERGEN:HBG067697
OrthoDB:EOG4NCMCR GeneTree:ENSGT00700000104124 KO:K15504
EMBL:AK090124 EMBL:BC117907 EMBL:BC117908 IPI:IPI00310471
RefSeq:NP_766378.1 UniGene:Mm.440177 ProteinModelPortal:Q8BTI7
SMR:Q8BTI7 IntAct:Q8BTI7 PhosphoSite:Q8BTI7 PaxDb:Q8BTI7
PRIDE:Q8BTI7 Ensembl:ENSMUST00000014642 GeneID:237615
KEGG:mmu:237615 UCSC:uc007hmm.1 CTD:283373 InParanoid:Q148Z3
OMA:KDAVSPF NextBio:383420 Bgee:Q8BTI7 CleanEx:MM_ANKRD52
Genevestigator:Q8BTI7 Uniprot:Q8BTI7
Length = 1076
Score = 118 (46.6 bits), Expect = 5.0e-07, Sum P(2) = 5.0e-07
Identities = 31/102 (30%), Positives = 53/102 (51%)
Query: 333 KTSMGLSQHILQNRIVGILLKHGA-IVSQQNKLGLTALHIAAGSGNSQALEDLIR--KEP 389
+T++ L+ V +L HGA + ++ K T LH AA SG++ +L LI +
Sbjct: 619 RTALFLATERGSTECVEVLTAHGASALIKERKRKWTPLHAAAASGHTDSLHLLIDSGERA 678
Query: 390 DCINLKTIMMETPLFFAVKNDHMVCAEVLLRWGANSEVLNLR 431
D ++ +TPL A+ N H+ C +LL G+ ++ +LR
Sbjct: 679 DITDVMDAYGQTPLMLAIMNGHVDCVHLLLEKGSTADAADLR 720
Score = 109 (43.4 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 46/176 (26%), Positives = 71/176 (40%)
Query: 278 VANGS---CTDKKVGPPLILATQAGDEDVIEILLKSKXXXXXXXXXXXXG-NSAL----- 328
+ NGS C DK PL +A + G E +I L+ + + A+
Sbjct: 326 IQNGSEIDCADKFGNTPLHVAARYGHELLISTLMTNGADTARRGIHDMFPLHLAVLFGFS 385
Query: 329 HCALKT-SMGLSQHILQNRIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRK 387
C K S G I+ + +L G ++ + LG T LH AA GN + L L+
Sbjct: 386 DCCRKLLSSGQLYSIVSSLSNEHVLSAGFDINTPDSLGRTCLHAAASGGNVECLNLLLSS 445
Query: 388 EPDCINLKTIMMETPLFFAVKNDHMVCAEVLLRWGANSEVLNLRRERPIDFAKSQD 443
D + + TPL +A N CA L+ GA + + P+ +A + D
Sbjct: 446 GAD-LRRRDKFGRTPLHYAAANGSYQCAVTLVTAGAGVNEADCKGCSPLHYAAASD 500
Score = 108 (43.1 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 35/145 (24%), Positives = 66/145 (45%)
Query: 351 LLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCI-NLKTIMMETPLFFAVKN 409
LL +GA S +++ G TA+H AA GN Q LE L+ +C+ ++++ + +PL A N
Sbjct: 536 LLDNGADPSLRDRQGYTAVHYAAAYGNRQNLELLLEMSFNCLEDVESTVPVSPLHLAAYN 595
Query: 410 DHMVCAEVLLRWGANSEVLNLRRERPIDFAKSQDMRFLLKAANTCHTNLAFLNQEKQNAS 469
H + L N +V + + + A + ++ T H A + + K+ +
Sbjct: 596 GHCEALKTLAETLVNLDVRDHKGRTALFLATERGSTECVEVL-TAHGASALIKERKRKWT 654
Query: 470 LESDEDISGTCEALLSMVDDNSNTE 494
SG ++L ++D +
Sbjct: 655 PLHAAAASGHTDSLHLLIDSGERAD 679
Score = 92 (37.4 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 54/203 (26%), Positives = 89/203 (43%)
Query: 291 PLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGN--SALHCALKTSMGLSQHILQNRIV 348
P+ A+ G ED +E+LL+ GN + LHCA+ + + +L +
Sbjct: 794 PMHWASYTGHEDCLELLLEHSPFSYLE------GNPFTPLHCAVINNQDSTTEML----L 843
Query: 349 GILLKHGA-IVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLKTIMMETPLFFAV 407
G L GA IV+ ++ G T LH AA + N L L++ + + +N T L A
Sbjct: 844 GAL---GAKIVNSRDAKGRTPLHAAAFADNVSGLRMLLQHQAE-VNATDHTGRTALMTAA 899
Query: 408 KNDHMVCAEVLLRWG-ANSEVLNLRRERPIDFA--KSQDMRFLLKAANTCHTNLAFLNQE 464
++ E LL G A+ VL+ + + A K + L+ A T +L +N
Sbjct: 900 ESGQTAAVEFLLYRGKADLTVLDENKNTALHLACSKGHEKCALMILAET--QDLGLINAT 957
Query: 465 KQNASLESDEDISGTCEALLSMV 487
N++L+ I+ L S+V
Sbjct: 958 --NSALQMPLHIAAR-NGLASVV 977
Score = 90 (36.7 bits), Expect = 5.0e-07, Sum P(2) = 5.0e-07
Identities = 27/79 (34%), Positives = 40/79 (50%)
Query: 51 DQQTAIVTKLLRVSCIFDSVSCATSLVNGDLGPVALVNEVEESSGMTALHLAAES-HTAR 109
D+ A L ++C + A LVN A VN+ + G T LH+AA S + A
Sbjct: 233 DEPNAFGNTALHIACYLGQDAVAIELVNAG----ANVNQPNDK-GFTPLHVAAVSTNGAL 287
Query: 110 CVELLLKKRARTDIRSKDG 128
C+ELL+ A + +SK+G
Sbjct: 288 CLELLVNNGADVNYQSKEG 306
Score = 67 (28.6 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 23/69 (33%), Positives = 30/69 (43%)
Query: 59 KLLRVSCIFDSVSCATSLVNGDLGPVALVNEVEESSGMTALHLAAESHTARCVELLLKKR 118
KLL ++ VS SL N + +S G T LH AA C+ LLL
Sbjct: 390 KLLSSGQLYSIVS---SLSNEHVLSAGFDINTPDSLGRTCLHAAASGGNVECLNLLLSSG 446
Query: 119 ARTDIRSKD 127
A D+R +D
Sbjct: 447 A--DLRRRD 453
Score = 60 (26.2 bits), Expect = 0.00058, Sum P(2) = 0.00058
Identities = 17/46 (36%), Positives = 22/46 (47%)
Query: 81 LGPVALVNEVEESSGMTALHLAAESHTARCVELLLKKRARTDIRSK 126
L P+ V + SG +ALH A S V LLL K A ++ K
Sbjct: 126 LAPLLSSLNVADRSGRSALHHAVHSGHLETVNLLLNKGASLNVCDK 171
>UNIPROTKB|B4DM51 [details] [associations]
symbol:MSI2 "RNA-binding protein Musashi homolog 2"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
HOGENOM:HOG000234441 HOVERGEN:HBG002295 UniGene:Hs.658922
HGNC:HGNC:18585 ChiTaRS:MSI2 EMBL:AC005325 EMBL:AC007431
EMBL:AC015883 EMBL:AC091181 EMBL:AK297295 IPI:IPI00908857
SMR:B4DM51 STRING:B4DM51 Ensembl:ENST00000442934 Uniprot:B4DM51
Length = 267
Score = 145 (56.1 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 37/85 (43%), Positives = 48/85 (56%)
Query: 549 KIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKHEKSAAAA 608
KIFVGGL + + YFE+ FG +EDA + +T + RGFGFVTF++E
Sbjct: 50 KIFVGGLSANTVVEDVKQYFEQ-FGKVEDAMLMFDKTTNRH--RGFGFVTFENEDVVEKV 106
Query: 609 VQARFVTIMGKEVEIKSAVPKEVLF 633
+ F I K VE K A PKEV+F
Sbjct: 107 CEIHFHEINNKMVECKKAQPKEVMF 131
>TAIR|locus:2129590 [details] [associations]
symbol:AT4G14300 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0008150 "biological_process" evidence=ND] [GO:0005829 "cytosol"
evidence=RCA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 EMBL:CP002687 GO:GO:0000166
Gene3D:3.30.70.330 EMBL:Z97335 EMBL:AL161538 GO:GO:0003676
GO:GO:0030529 eggNOG:COG0724 HOGENOM:HOG000234441 KO:K14411
HSSP:Q61474 EMBL:AJ303457 EMBL:AK226323 IPI:IPI00517003 PIR:G71404
RefSeq:NP_193166.2 UniGene:At.33295 ProteinModelPortal:Q8W034
SMR:Q8W034 IntAct:Q8W034 MINT:MINT-1163850 STRING:Q8W034
PaxDb:O23288 PRIDE:Q8W034 EnsemblPlants:AT4G14300.1 GeneID:827071
KEGG:ath:AT4G14300 TAIR:At4g14300 InParanoid:Q8W034 OMA:YGATNIP
PhylomeDB:Q8W034 ProtClustDB:CLSN2913105 Genevestigator:Q8W034
Uniprot:Q8W034
Length = 411
Score = 149 (57.5 bits), Expect = 5.6e-07, P = 5.6e-07
Identities = 33/82 (40%), Positives = 47/82 (57%)
Query: 549 KIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKHEKSAAAA 608
KIFVGGLP L + YFE +GP+ D + Q + RGFGFV+F E + +
Sbjct: 111 KIFVGGLPPTLTDEEFRQYFEV-YGPVTDVAIMYDQATNRP--RGFGFVSFDSEDAVDSV 167
Query: 609 VQARFVTIMGKEVEIKSAVPKE 630
+ F + GK+VE+K A+PK+
Sbjct: 168 LHKTFHDLSGKQVEVKRALPKD 189
>UNIPROTKB|F8W646 [details] [associations]
symbol:HNRNPA1 "Heterogeneous nuclear ribonucleoprotein A1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
EMBL:AC078778 HGNC:HGNC:5031 ChiTaRS:HNRNPA1 IPI:IPI01022306
ProteinModelPortal:F8W646 SMR:F8W646 PRIDE:F8W646
Ensembl:ENST00000547708 ArrayExpress:F8W646 Bgee:F8W646
Uniprot:F8W646
Length = 156
Score = 127 (49.8 bits), Expect = 6.0e-07, P = 6.0e-07
Identities = 33/82 (40%), Positives = 47/82 (57%)
Query: 549 KIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKHEKSAAAA 608
K+F+GGL F +SL +FE+ +G + D V K+S RGFGFVT+ + AA
Sbjct: 15 KLFIGGLSFETTDESLRSHFEQ-WGTLTDCVVMRDPNTKRS--RGFGFVTYATVEEVDAA 71
Query: 609 VQARFVTIMGKEVEIKSAVPKE 630
+ AR + G+ VE K AV +E
Sbjct: 72 MNARPHKVDGRVVEPKRAVSRE 93
>TAIR|locus:2164082 [details] [associations]
symbol:AT5G53720 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 HOGENOM:HOG000276232 EMBL:AB017066
HSSP:Q61474 IPI:IPI00526229 RefSeq:NP_200183.1 UniGene:At.55532
ProteinModelPortal:Q9FI04 SMR:Q9FI04 EnsemblPlants:AT5G53720.1
GeneID:835453 KEGG:ath:AT5G53720 TAIR:At5g53720 eggNOG:NOG297705
InParanoid:Q9FI04 OMA:ATRACEN PhylomeDB:Q9FI04
ProtClustDB:CLSN2916326 Genevestigator:Q9FI04 Uniprot:Q9FI04
Length = 100
Score = 127 (49.8 bits), Expect = 6.0e-07, P = 6.0e-07
Identities = 36/90 (40%), Positives = 53/90 (58%)
Query: 538 MIHASTQEFKSKIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVA-EFQTEKQSVSRGFGF 596
M H + +E +KI+V GLP+ ++ L YFE+ FG I A+V + T++ S+GFGF
Sbjct: 1 MSHPNDRE--TKIYVAGLPWITRTEGLISYFER-FGEIVYAKVVCDGATQR---SKGFGF 54
Query: 597 VTFKHEKSAAAAVQARFVTIMGKEVEIKSA 626
VTF+ +SA A + TI G+ V K A
Sbjct: 55 VTFREVESATRACENPNHTIDGRTVNCKLA 84
>TAIR|locus:2133862 [details] [associations]
symbol:AT4G26650 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0042732 "D-xylose
metabolic process" evidence=RCA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
EMBL:CP002687 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
KO:K14411 HSSP:Q61474 EMBL:AF419605 EMBL:AY097345 IPI:IPI00533249
RefSeq:NP_567753.1 UniGene:At.20416 UniGene:At.67937
ProteinModelPortal:Q8W569 SMR:Q8W569 STRING:Q8W569 PRIDE:Q8W569
EnsemblPlants:AT4G26650.1 GeneID:828772 KEGG:ath:AT4G26650
TAIR:At4g26650 InParanoid:Q8W569 OMA:LVEAVIM PhylomeDB:Q8W569
ProtClustDB:CLSN2689626 Genevestigator:Q8W569 Uniprot:Q8W569
Length = 455
Score = 149 (57.5 bits), Expect = 6.8e-07, P = 6.8e-07
Identities = 36/84 (42%), Positives = 48/84 (57%)
Query: 549 KIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVA-EFQTEKQSVSRGFGFVTFKHEKSAAA 607
KIFVGGLP + YF++ FG I D V + T++ RGFGF+TF E+S
Sbjct: 123 KIFVGGLPSSITEAEFKNYFDQ-FGTIADVVVMYDHNTQRP---RGFGFITFDSEESVDM 178
Query: 608 AVQARFVTIMGKEVEIKSAVPKEV 631
+ F + GK VE+K AVPKE+
Sbjct: 179 VLHKTFHELNGKMVEVKRAVPKEL 202
>TAIR|locus:2173967 [details] [associations]
symbol:AT5G55550 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
EMBL:CP002688 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
KO:K14411 HSSP:Q61474 ProtClustDB:CLSN2689626 EMBL:AY050796
EMBL:AY096460 IPI:IPI00543007 RefSeq:NP_568826.1 RefSeq:NP_974937.1
UniGene:At.6910 ProteinModelPortal:Q949Z3 SMR:Q949Z3 PRIDE:Q949Z3
EnsemblPlants:AT5G55550.2 EnsemblPlants:AT5G55550.3 GeneID:835649
KEGG:ath:AT5G55550 TAIR:At5g55550 InParanoid:Q949Z3 OMA:VSERVIM
PhylomeDB:Q949Z3 Genevestigator:Q949Z3 Uniprot:Q949Z3
Length = 460
Score = 149 (57.5 bits), Expect = 6.9e-07, P = 6.9e-07
Identities = 37/97 (38%), Positives = 52/97 (53%)
Query: 536 MCMIHASTQEFKSKIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVA-EFQTEKQSVSRGF 594
M +H K KIFVGGLP + + YF++ FG I D V + T++ RGF
Sbjct: 99 MSPVHGGGGRTK-KIFVGGLPSSITEEEFKNYFDQ-FGTIADVVVMYDHNTQRP---RGF 153
Query: 595 GFVTFKHEKSAAAAVQARFVTIMGKEVEIKSAVPKEV 631
GF+TF + + + F + GK VE+K AVPKE+
Sbjct: 154 GFITFDSDDAVDRVLHKTFHELNGKLVEVKRAVPKEI 190
>UNIPROTKB|B4DHE8 [details] [associations]
symbol:MSI2 "RNA-binding protein Musashi homolog 2"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
HOGENOM:HOG000234441 HOVERGEN:HBG002295 UniGene:Hs.658922
HGNC:HGNC:18585 ChiTaRS:MSI2 EMBL:AC005325 EMBL:AC007431
EMBL:AC015883 EMBL:AC091181 EMBL:AK295060 IPI:IPI00910884
SMR:B4DHE8 STRING:B4DHE8 Ensembl:ENST00000416426 UCSC:uc010wnm.1
Uniprot:B4DHE8
Length = 324
Score = 145 (56.1 bits), Expect = 9.1e-07, P = 9.1e-07
Identities = 37/85 (43%), Positives = 48/85 (56%)
Query: 549 KIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKHEKSAAAA 608
KIFVGGL + + YFE+ FG +EDA + +T + RGFGFVTF++E
Sbjct: 89 KIFVGGLSANTVVEDVKQYFEQ-FGKVEDAMLMFDKTTNRH--RGFGFVTFENEDVVEKV 145
Query: 609 VQARFVTIMGKEVEIKSAVPKEVLF 633
+ F I K VE K A PKEV+F
Sbjct: 146 CEIHFHEINNKMVECKKAQPKEVMF 170
>POMBASE|SPBC660.15 [details] [associations]
symbol:SPBC660.15 "mRNA cleavage factor complex subunit
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=ISO] [GO:0003730 "mRNA 3'-UTR binding"
evidence=NAS] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005849 "mRNA cleavage factor
complex" evidence=ISO] [GO:0006378 "mRNA polyadenylation"
evidence=ISO] [GO:0006379 "mRNA cleavage" evidence=ISO]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 PomBase:SPBC660.15 GO:GO:0005737 GO:GO:0000166
EMBL:CU329671 Gene3D:3.30.70.330 GO:GO:0006378 GO:GO:0003730
eggNOG:COG0724 GO:GO:0006379 GO:GO:0005849 KO:K14411 HSSP:Q14103
OrthoDB:EOG4TF3VC PIR:T40627 RefSeq:NP_595094.1
ProteinModelPortal:O94432 SMR:O94432 STRING:O94432
EnsemblFungi:SPBC660.15.1 GeneID:2541150 KEGG:spo:SPBC660.15
OMA:CHKANDG NextBio:20802263 Uniprot:O94432
Length = 474
Score = 148 (57.2 bits), Expect = 9.4e-07, P = 9.4e-07
Identities = 41/136 (30%), Positives = 65/136 (47%)
Query: 516 RGSKCFYALGEEQHR---KMNPGMCMIHASTQEFKSKIFVGGLPFFLDSDSLGGYFEKHF 572
+ KC + ++H K+ I QE +K+FVGG+P + +F + F
Sbjct: 212 KNPKCVNEVMSKEHHLDGKIIDPKRAIPREEQEKTAKMFVGGVPGDCTEEEFRNFFNQ-F 270
Query: 573 GPIEDARVAEFQTEKQSVSRGFGFVTFKHEKSAAAAVQARFVTIMGKEVEIKSAVPKEVL 632
G + DA + + RGFGFVT+++E + A + ++TI GK VE+K A PK
Sbjct: 271 GRVLDATL--MMDKDTGRPRGFGFVTYENESAVEATMSQPYITIHGKPVEVKRATPK--- 325
Query: 633 FAELQKQSAQQQESKH 648
A L+ + Q H
Sbjct: 326 -ASLRDSHDRHQHGYH 340
Score = 130 (50.8 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 33/82 (40%), Positives = 48/82 (58%)
Query: 549 KIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKHEKSAAAA 608
K+F+GGL + DSL YFE+ FG + D V T +S RGFGF+TFK+ K
Sbjct: 164 KMFIGGLNWETTDDSLRDYFEQ-FGEVLDCTVMRDSTTGRS--RGFGFLTFKNPK-CVNE 219
Query: 609 VQARFVTIMGKEVEIKSAVPKE 630
V ++ + GK ++ K A+P+E
Sbjct: 220 VMSKEHHLDGKIIDPKRAIPRE 241
>UNIPROTKB|Q96DH6 [details] [associations]
symbol:MSI2 "RNA-binding protein Musashi homolog 2"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005844 "polysome" evidence=IEA] [GO:0008266
"poly(U) RNA binding" evidence=IEA] [GO:0048864 "stem cell
development" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005737 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003723 eggNOG:COG0724 HOGENOM:HOG000234441
HOVERGEN:HBG002295 KO:K14411 OrthoDB:EOG48GW3J EMBL:BC001526
EMBL:BC017560 EMBL:AK093888 IPI:IPI00073713 IPI:IPI00167806
IPI:IPI00455161 RefSeq:NP_620412.1 RefSeq:NP_733839.1
UniGene:Hs.658922 ProteinModelPortal:Q96DH6 SMR:Q96DH6
IntAct:Q96DH6 STRING:Q96DH6 PhosphoSite:Q96DH6 DMDM:51316513
PaxDb:Q96DH6 PRIDE:Q96DH6 DNASU:124540 Ensembl:ENST00000284073
Ensembl:ENST00000322684 Ensembl:ENST00000579180 GeneID:124540
KEGG:hsa:124540 UCSC:uc002iuz.1 UCSC:uc002iva.3 CTD:124540
GeneCards:GC17P055334 HGNC:HGNC:18585 HPA:CAB022300 MIM:607897
neXtProt:NX_Q96DH6 PharmGKB:PA38590 InParanoid:Q96DH6 OMA:ISDCTIM
PhylomeDB:Q96DH6 ChiTaRS:MSI2 GenomeRNAi:124540 NextBio:81316
ArrayExpress:Q96DH6 Bgee:Q96DH6 CleanEx:HS_MSI2
Genevestigator:Q96DH6 GermOnline:ENSG00000153944 Uniprot:Q96DH6
Length = 328
Score = 145 (56.1 bits), Expect = 9.4e-07, P = 9.4e-07
Identities = 37/85 (43%), Positives = 48/85 (56%)
Query: 549 KIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKHEKSAAAA 608
KIFVGGL + + YFE+ FG +EDA + +T + RGFGFVTF++E
Sbjct: 111 KIFVGGLSANTVVEDVKQYFEQ-FGKVEDAMLMFDKTTNRH--RGFGFVTFENEDVVEKV 167
Query: 609 VQARFVTIMGKEVEIKSAVPKEVLF 633
+ F I K VE K A PKEV+F
Sbjct: 168 CEIHFHEINNKMVECKKAQPKEVMF 192
Score = 118 (46.6 bits), Expect = 0.00092, P = 0.00092
Identities = 32/87 (36%), Positives = 43/87 (49%)
Query: 543 TQEFKSKIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKHE 602
+Q K+F+GGL + DSL YF K FG I + V T K+S RGFGFVTF
Sbjct: 16 SQHDPGKMFIGGLSWQTSPDSLRDYFSK-FGEIRECMVMRDPTTKRS--RGFGFVTFADP 72
Query: 603 KSAAAAVQARFVTIMGKEVEIKSAVPK 629
S + + K ++ K A P+
Sbjct: 73 ASVDKVLGQPHHELDSKTIDPKVAFPR 99
>ZFIN|ZDB-GENE-030826-25 [details] [associations]
symbol:msi2a "musashi homolog 2a (Drosophila)"
species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 ZFIN:ZDB-GENE-030826-25 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 eggNOG:COG0724
HOGENOM:HOG000234441 HOVERGEN:HBG002295 KO:K14411
GeneTree:ENSGT00700000104255 OrthoDB:EOG48GW3J HSSP:Q61474
EMBL:CR931799 EMBL:CR931806 EMBL:BC045335 IPI:IPI00489753
RefSeq:NP_997961.1 UniGene:Dr.32677 SMR:Q7ZW10
Ensembl:ENSDART00000099473 Ensembl:ENSDART00000132096
GeneID:100002680 KEGG:dre:100002680 CTD:100002680 InParanoid:Q7ZW10
OMA:MEADASQ NextBio:20785547 Uniprot:Q7ZW10
Length = 388
Score = 146 (56.5 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 37/85 (43%), Positives = 48/85 (56%)
Query: 549 KIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKHEKSAAAA 608
KIFVGGL + + YFE+ FG +EDA + +T + RGFGFVTF++E
Sbjct: 111 KIFVGGLSASTVVEDVKQYFEQ-FGKVEDAMLMFDKTTNRH--RGFGFVTFENEDIVEKV 167
Query: 609 VQARFVTIMGKEVEIKSAVPKEVLF 633
+ F I K VE K A PKEV+F
Sbjct: 168 CEIHFHEINNKMVECKKAQPKEVMF 192
>MGI|MGI:1923876 [details] [associations]
symbol:Msi2 "musashi RNA-binding protein 2" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0003727 "single-stranded RNA binding"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005844
"polysome" evidence=IDA] [GO:0008266 "poly(U) RNA binding"
evidence=IDA] [GO:0048864 "stem cell development" evidence=IMP]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 MGI:MGI:1923876 GO:GO:0005737 GO:GO:0008266
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0005844 eggNOG:COG0724
HOGENOM:HOG000234441 HOVERGEN:HBG002295 KO:K14411
GeneTree:ENSGT00700000104255 GO:GO:0048864 CTD:124540 ChiTaRS:MSI2
EMBL:AB056102 EMBL:AB056103 EMBL:BK001483 EMBL:AK049637
EMBL:AK049688 EMBL:AK051269 IPI:IPI00120924 IPI:IPI00462899
IPI:IPI00462900 RefSeq:NP_473384.1 UniGene:Mm.400451
UniGene:Mm.428433 UniGene:Mm.474737 ProteinModelPortal:Q920Q6
SMR:Q920Q6 STRING:Q920Q6 PhosphoSite:Q920Q6 PaxDb:Q920Q6
PRIDE:Q920Q6 Ensembl:ENSMUST00000092794 Ensembl:ENSMUST00000107909
GeneID:76626 KEGG:mmu:76626 UCSC:uc007kvn.2 InParanoid:Q920Q6
OMA:ENYISAA NextBio:345476 Bgee:Q920Q6 CleanEx:MM_MSI2
Genevestigator:Q920Q6 GermOnline:ENSMUSG00000069769 Uniprot:Q920Q6
Length = 346
Score = 145 (56.1 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 37/85 (43%), Positives = 48/85 (56%)
Query: 549 KIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKHEKSAAAA 608
KIFVGGL + + YFE+ FG +EDA + +T + RGFGFVTF++E
Sbjct: 111 KIFVGGLSANTVVEDVKQYFEQ-FGKVEDAMLMFDKTTNRH--RGFGFVTFENEDVVEKV 167
Query: 609 VQARFVTIMGKEVEIKSAVPKEVLF 633
+ F I K VE K A PKEV+F
Sbjct: 168 CEIHFHEINNKMVECKKAQPKEVMF 192
Score = 121 (47.7 bits), Expect = 0.00047, P = 0.00047
Identities = 34/97 (35%), Positives = 46/97 (47%)
Query: 533 NPGMCMIHASTQEFKSKIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSR 592
+PG +Q K+F+GGL + DSL YF K FG I + V T K+S R
Sbjct: 6 SPGTSGSANDSQHDPGKMFIGGLSWQTSPDSLRDYFSK-FGEIRECMVMRDPTTKRS--R 62
Query: 593 GFGFVTFKHEKSAAAAVQARFVTIMGKEVEIKSAVPK 629
GFGFVTF S + + K ++ K A P+
Sbjct: 63 GFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPR 99
>ZFIN|ZDB-GENE-030131-6154 [details] [associations]
symbol:hnrnpa0b "heterogeneous nuclear
ribonucleoprotein A0b" species:7955 "Danio rerio" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 ZFIN:ZDB-GENE-030131-6154
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0030529
eggNOG:COG0724 HOVERGEN:HBG002295 HOGENOM:HOG000234442 KO:K12894
EMBL:BC066434 IPI:IPI00507638 RefSeq:NP_999871.1 UniGene:Dr.35374
ProteinModelPortal:Q6NYW8 SMR:Q6NYW8 STRING:Q6NYW8 PRIDE:Q6NYW8
GeneID:334222 KEGG:dre:334222 CTD:334222 InParanoid:Q6NYW8
OrthoDB:EOG4M65KN NextBio:20810313 ArrayExpress:Q6NYW8 Bgee:Q6NYW8
Uniprot:Q6NYW8
Length = 314
Score = 144 (55.7 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 38/89 (42%), Positives = 50/89 (56%)
Query: 542 STQEFKSKIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKH 601
S E K+FVGGL +D L YFE+ FG + D V Q ++ SR FGFVT+
Sbjct: 2 SEMEKLCKLFVGGLNVQTTNDGLRSYFEQ-FGNLTDCVVV--QNDQLQRSRCFGFVTYST 58
Query: 602 EKSAAAAVQARFVTIMGKEVEIKSAVPKE 630
+ A AA+ AR + GK VE+K AV +E
Sbjct: 59 SEEADAAMAARPHVVDGKNVEVKRAVARE 87
Score = 130 (50.8 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 36/87 (41%), Positives = 50/87 (57%)
Query: 549 KIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQS-VSRGFGFVTFKHEKSAAA 607
KIFVGGL ++ L +F + FG IE + V T+K + RGFGFV F+ SA
Sbjct: 100 KIFVGGLKDDIEEKDLTEFFSQ-FGMIEKSEVI---TDKDTGKKRGFGFVHFEDNDSADK 155
Query: 608 AVQARFVTIMGKEVEIKSAVPKEVLFA 634
AV +F I G +VE+K A+ K+ + A
Sbjct: 156 AVVLKFHMINGHKVEVKKALTKQEIQA 182
>ZFIN|ZDB-GENE-041014-19 [details] [associations]
symbol:si:dkey-86e18.2 "si:dkey-86e18.2"
species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] InterPro:IPR002110 InterPro:IPR001315 Pfam:PF00619
PRINTS:PR01415 PROSITE:PS50088 PROSITE:PS50209 SMART:SM00248
ZFIN:ZDB-GENE-041014-19 GO:GO:0042981 eggNOG:COG0666
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029
SUPFAM:SSF47986 GeneTree:ENSGT00700000104010 EMBL:CR392368
IPI:IPI00511372 RefSeq:NP_001020663.1 UniGene:Dr.94142
Ensembl:ENSDART00000140250 GeneID:557416 KEGG:dre:557416
InParanoid:Q5TYM7 OMA:CACKTGH OrthoDB:EOG47PX65 NextBio:20881980
Uniprot:Q5TYM7
Length = 744
Score = 117 (46.2 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 53/191 (27%), Positives = 83/191 (43%)
Query: 276 GAVANGSCTDKKVGPPLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKTS 335
GA +N S +KK PL LA G + LL K G S LH A +
Sbjct: 566 GAYSNASEREKKT--PLHLAAAEGHTKAVSALLAGKAKVGAKDMD---GCSPLHYAARNG 620
Query: 336 MGLSQHILQNRIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLK 395
+ +L + K+ V +N TALH+AA G+ +AL ++ + IN
Sbjct: 621 KERAGSVL---LASSKSKN---VDDKNVWRRTALHLAAEHGH-EALVGILLENKAKINAL 673
Query: 396 TIMMETPLFFAVKNDHMVCAEVLLRWGANSEVLNLRRERPIDFAKSQDMRFLLKAANT-C 454
+TPL A K H+ + L+ W N E NL+ + K ++ + +A +T
Sbjct: 674 DNNKDTPLHCACKTGHLGTVQRLINW-TNGERANLQATNNV---KKNALQ-VAEAGDTEA 728
Query: 455 HTNLAFLNQEK 465
H N++ L ++K
Sbjct: 729 HENISTLLKKK 739
Score = 105 (42.0 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 27/97 (27%), Positives = 51/97 (52%)
Query: 347 IVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLKTIMMETPLFFA 406
+V L++HGA V+ N+LG T + +AA GN +A + L+ K+ M + L A
Sbjct: 393 VVAALIEHGADVNSCNELGYTPVLLAAELGNGEAFKVLVSKKAKLDERLPNQMSS-LHLA 451
Query: 407 VKNDHMVCAEVLLRWGANSEVLNLRRERPIDFAKSQD 443
V++ + A++LL G + + + + P+ + S +
Sbjct: 452 VQSGSIQIAQILLHKGIDPNISGPKDQTPLHLSASHN 488
Score = 105 (42.0 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 28/110 (25%), Positives = 57/110 (51%)
Query: 333 KTSMGLSQHILQNRIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCI 392
+T + LS Q ++ +LL+ GA ++ + G T LH+A+ +G+++A+ L+ + D +
Sbjct: 478 QTPLHLSASHNQPAMMALLLRVGAQLNPVTQDGFTPLHLASQNGHTEAVAQLLEAKAD-V 536
Query: 393 NLKTIMMETPLFFAVKNDHMVCAEVLLRWGANSEVLNLRRERPIDFAKSQ 442
+ K T L +A + + + LL GA S ++ P+ A ++
Sbjct: 537 HAKDKQGRTALHWAAEQGEVAIIQSLLAAGAYSNASEREKKTPLHLAAAE 586
Score = 84 (34.6 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 34/113 (30%), Positives = 52/113 (46%)
Query: 22 IINSLLEDDKKQLINVSKRHFID-NSLDNADQQTAIVTKLLRVS-----CIFDSVSCATS 75
+I LLE DK+ L+ SK I S N + ++L+ I +++S
Sbjct: 112 LIGYLLEKDKQGLVKNSKPERIHPKSTANEPNNEPLNKQILKSESNHHDAILEAISSGDL 171
Query: 76 LVNGDLGPVALVNEVEESSGMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
+ +L VN V SS T LH AAE V LL++ A+ D++ K+G
Sbjct: 172 YLLQELTKELDVNSVL-SSNDTLLHHAAEYGKEAIVYFLLRQGAKLDLKDKEG 223
Score = 63 (27.2 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 17/44 (38%), Positives = 26/44 (59%)
Query: 85 ALVNEVEESSGMTALHLAAES-HTARCVELLLKKRARTDIRSKD 127
A +N V + G T LHLA+++ HT +LL A+ D+ +KD
Sbjct: 501 AQLNPVTQD-GFTPLHLASQNGHTEAVAQLL---EAKADVHAKD 540
Score = 62 (26.9 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 23/71 (32%), Positives = 35/71 (49%)
Query: 58 TKLLRVSCIFDSVSCATSLV-NGDLGPVALVNEVEESSGMTALHLAAESHTARCVELLLK 116
T +L ++ I D+ + A L+ NG ALV + ++ TALH A + +LLK
Sbjct: 287 TTVLHMAAIEDNATLAEVLLRNG-----ALV-DAQDGQRKTALHHAVRHGNEKTAAVLLK 340
Query: 117 KRARTDIRSKD 127
A+ D R D
Sbjct: 341 AGAQVDSRIVD 351
Score = 58 (25.5 bits), Expect = 0.00049, Sum P(2) = 0.00049
Identities = 16/40 (40%), Positives = 23/40 (57%)
Query: 89 EVEESSGMTALHLAAE-SHTARCVELLLKKRARTDIRSKD 127
++++ G TALH AA+ HTA V L +A DI + D
Sbjct: 217 DLKDKEGRTALHRAAQRGHTAVAVALA---KAGADIHATD 253
Score = 58 (25.5 bits), Expect = 0.00049, Sum P(2) = 0.00049
Identities = 26/103 (25%), Positives = 50/103 (48%)
Query: 22 IINSLLEDDKKQLINVSKRHFIDNSLDNADQQTAIVTKLLRVSCIFDSVSCATSLVNGDL 81
I+++ + ++K L+++ +H + S+ + A+ + R D+V A + +G
Sbjct: 349 IVDAAFQLNRKSLLSLFLQH-VHESMSQTEINAALFKAVQRN---LDAVVAAL-IEHG-- 401
Query: 82 GPVALVNEVEESSGMTALHLAAESHTARCVELLLKKRARTDIR 124
A VN E G T + LAAE ++L+ K+A+ D R
Sbjct: 402 ---ADVNSCNEL-GYTPVLLAAELGNGEAFKVLVSKKAKLDER 440
>WB|WBGene00003423 [details] [associations]
symbol:msi-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005737
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 KO:K14411
GeneTree:ENSGT00700000104255 HSSP:Q61474 EMBL:Z35601 EMBL:AB036738
PIR:T24148 RefSeq:NP_497799.1 UniGene:Cel.19474
ProteinModelPortal:G5EFS2 SMR:G5EFS2 EnsemblMetazoa:R10E9.1.1
EnsemblMetazoa:R10E9.1.2 GeneID:175514 KEGG:cel:CELE_R10E9.1
CTD:175514 WormBase:R10E9.1 OMA:VADKVCE NextBio:888480
Uniprot:G5EFS2
Length = 320
Score = 144 (55.7 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 38/94 (40%), Positives = 50/94 (53%)
Query: 549 KIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKHEKSAAAA 608
K+F+GGL + + YFE +G +EDA + F Q RGFGFVTF ++ A
Sbjct: 135 KVFIGGLSATSTLEDMKQYFET-YGKVEDAMLM-FDKATQR-HRGFGFVTFDSDEVADKV 191
Query: 609 VQARFVTIMGKEVEIKSAVPKEVLF-AELQKQSA 641
+ F I GK VE K A PKEV+ +L K A
Sbjct: 192 CEIHFHEINGKMVECKKAQPKEVMLPVQLNKSRA 225
>UNIPROTKB|Q9Y575 [details] [associations]
symbol:ASB3 "Ankyrin repeat and SOCS box protein 3"
species:9606 "Homo sapiens" [GO:0035556 "intracellular signal
transduction" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR002110 InterPro:IPR001496 Pfam:PF07525
PRINTS:PR01415 PROSITE:PS50088 PROSITE:PS50225 SMART:SM00248
SMART:SM00969 UniPathway:UPA00143 Reactome:REACT_6900 EMBL:CH471053
GO:GO:0035556 eggNOG:COG0666 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0016567
GO:GO:0005622 CTD:51130 HOVERGEN:HBG024356 KO:K10325
OrthoDB:EOG4NVZK3 EMBL:AF156778 EMBL:AK000985 EMBL:AK001283
EMBL:AK056069 EMBL:AC007883 EMBL:AC008064 EMBL:AC008068
EMBL:AC069157 EMBL:BC006488 EMBL:BC009569 EMBL:BC110915
IPI:IPI00007215 IPI:IPI00871755 IPI:IPI00921607
RefSeq:NP_001157637.1 RefSeq:NP_001188894.1 RefSeq:NP_057199.1
RefSeq:NP_665862.1 UniGene:Hs.40763 ProteinModelPortal:Q9Y575
SMR:Q9Y575 IntAct:Q9Y575 STRING:Q9Y575 PhosphoSite:Q9Y575
DMDM:20532004 PRIDE:Q9Y575 DNASU:51130 Ensembl:ENST00000263634
Ensembl:ENST00000352846 Ensembl:ENST00000394717
Ensembl:ENST00000406687 GeneID:100302652 GeneID:51130
KEGG:hsa:51130 UCSC:uc002rxg.2 CTD:100302652 GeneCards:GC02M053750
GeneCards:GC02M053759 HGNC:HGNC:16013 HPA:HPA003940 MIM:605760
neXtProt:NX_Q9Y575 PharmGKB:PA25031 InParanoid:Q9Y575 OMA:HLAYCLK
PhylomeDB:Q9Y575 ChiTaRS:ASB3 GenomeRNAi:51130 NextBio:53955
ArrayExpress:Q9Y575 Bgee:Q9Y575 CleanEx:HS_ASB3
Genevestigator:Q9Y575 GermOnline:ENSG00000115239 Uniprot:Q9Y575
Length = 518
Score = 134 (52.2 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 44/151 (29%), Positives = 72/151 (47%)
Query: 277 AVANGSCTDKKVGPPLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKTSM 336
A A+ + T + PL LA + G DV+ +LL+ G ++LH A
Sbjct: 101 AGADPNATTLEETTPLFLAVENGQIDVLRLLLQH--GANVNGSHSMCGWNSLHQA----- 153
Query: 337 GLSQHILQNRIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLKT 396
++ I+ +LL+ GA Q+ G+T L +AA G ++L LI + +N +
Sbjct: 154 SFQENA---EIIKLLLRKGANKECQDDFGITPLFVAAQYGKLESLSILISSGAN-VNCQA 209
Query: 397 IMMETPLFFAVKNDHMVCAEVLLRWGANSEV 427
+ TPLF A + H C E+LL GA+ ++
Sbjct: 210 LDKATPLFIAAQEGHTKCVELLLSSGADPDL 240
Score = 62 (26.9 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 17/52 (32%), Positives = 27/52 (51%)
Query: 68 DSVSCATSLVNGDLGPVALVNEVEESSGMTALHLAAESHTARCVELLLKKRA 119
+SV C L+N D + +++ G ALHLAA + V++LL+ A
Sbjct: 54 NSVECLQMLINADSSENYI--KMKTFEGFCALHLAASQGHWKIVQILLEAGA 103
Score = 44 (20.5 bits), Expect = 8.0e-05, Sum P(2) = 8.0e-05
Identities = 7/27 (25%), Positives = 17/27 (62%)
Query: 89 EVEESSGMTALHLAAESHTARCVELLL 115
+V ++ G +H AA ++ C+++L+
Sbjct: 37 DVADNRGWMPIHEAAYHNSVECLQMLI 63
>UNIPROTKB|F1NJ80 [details] [associations]
symbol:ANK3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007165 "signal transduction" evidence=IEA]
InterPro:IPR000488 Pfam:PF00531 InterPro:IPR002110 PRINTS:PR01415
PROSITE:PS50017 PROSITE:PS50088 SMART:SM00005 SMART:SM00248
GO:GO:0007165 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 Gene3D:1.10.533.10
InterPro:IPR011029 SUPFAM:SSF47986 InterPro:IPR000906 Pfam:PF00791
SMART:SM00218 PROSITE:PS51145 GeneTree:ENSGT00700000104348
EMBL:AADN02035197 EMBL:AADN02035198 EMBL:AADN02035199
IPI:IPI00579703 Ensembl:ENSGALT00000005686 ArrayExpress:F1NJ80
Uniprot:F1NJ80
Length = 1699
Score = 138 (53.6 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 83/354 (23%), Positives = 135/354 (38%)
Query: 95 GMTALHLAAESHTARCVELLLKKRARTDIRSKDGXXXXXXXXXXXXXXMDVIWNPDEYSV 154
G TALH+A+ + A V++L+ RA + +S++G + V + D +
Sbjct: 65 GNTALHIASLAGQAEVVKVLVTNRANVNAQSQNGFTPLYMAAQENHLEV-VKFLLDNGAS 123
Query: 155 EDLVVILGQKNLTTVKLLSQKTKELDEVAYANXXXXXXXXXXXXXXXXXDKVNESILVL- 213
+ L G L L Q ++ + N D + L+L
Sbjct: 124 QSLATEDGFTPLAVA--LQQGHDQVVSLLLENDTKGKVRLPALHIAARKDDTKAAALLLQ 181
Query: 214 --HDSDLGAKEKTTI------YECVIREALALGRATKLQRAVKRNSTPTTSQSAEKRKXX 265
H++D+ +K T Y + L L R + + + TP A KR
Sbjct: 182 NDHNADVESKSGFTPLHIAAHYGNINVATLLLNRGAAVDFTARNDITPL--HVASKRGNA 239
Query: 266 XXXXXXXXXFGAVANGSCTDKKVGPPLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGN 325
GA + D PL ++G E V+E+LL G
Sbjct: 240 NMVKLLLDR-GAKIDAKTRDGLT--PLHCGARSGHEQVVEMLLDR---GAPILSKTKNGL 293
Query: 326 SALHCALKTSMGLSQHILQNRIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLI 385
S LH A + H+ V +L++H V LTALH+AA G+ + + L+
Sbjct: 294 SPLHMATQ-----GDHL---NCVQLLIQHNVPVDDVTNDYLTALHVAAHCGHYKVAKVLL 345
Query: 386 RKEPDCINLKTIMMETPLFFAVKNDHMVCAEVLLRWGANSEVLNLRRERPIDFA 439
K+ + N K + TPL A K + + E+LL+ GA+ + + PI A
Sbjct: 346 DKKANP-NAKALNGFTPLHIACKKNRIKVMELLLKHGASIQAVTESGLTPIHVA 398
Score = 128 (50.1 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 49/166 (29%), Positives = 73/166 (43%)
Query: 275 FGAVANGSCTDKKVGPPLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKT 334
+GA AN + T + + P + LA+Q G D++ +LL G + LH A
Sbjct: 611 YGADAN-AVTRQGIAP-VHLASQDGHVDMVSLLLTRNANVNLSNKS---GLTPLHLA--- 662
Query: 335 SMGLSQHILQNRIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINL 394
+Q N + +L+ GA V Q K+G T LH+ GN + + L++ IN
Sbjct: 663 ----AQEDRVN-VAEVLVNQGAAVDAQTKMGYTPLHVGCHYGNIKIVNFLLQHSAK-INA 716
Query: 395 KTIMMETPLFFAVKNDHMVCAEVLLRWGANSEVLNLRRERPIDFAK 440
KT TPL A + H VLL+ GA L + + AK
Sbjct: 717 KTKNGYTPLHQAAQQGHTHIINVLLQHGAAPNELTVNGNTALAIAK 762
Score = 121 (47.7 bits), Expect = 7.0e-06, Sum P(2) = 7.0e-06
Identities = 56/212 (26%), Positives = 86/212 (40%)
Query: 276 GAVANGSCTDKKVGPPLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKTS 335
GA N + T PL L+ + G EDV +LL+ G + LH A K
Sbjct: 480 GASPNAATTSGYT--PLHLSAREGHEDVASVLLEH---GASLAIITKKGFTPLHVAAKYG 534
Query: 336 MGLSQHILQNRIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLK 395
+ + +LL+ A K GLT LH+AA N Q + L+ + +
Sbjct: 535 --------KIEVANLLLQKNASPDASGKSGLTPLHVAAHYDN-QKVALLLLDQGASPHAS 585
Query: 396 TIMMETPLFFAVKNDHMVCAEVLLRWGANSEVLNLRRERPIDFAKSQDMRF-LLKAANTC 454
TPL A K + M A LL +GA++ + + P+ A SQD ++ T
Sbjct: 586 AKNGYTPLHIAAKKNQMDIATTLLEYGADANAVTRQGIAPVHLA-SQDGHVDMVSLLLTR 644
Query: 455 HTNLAFLNQEKQNA-SLESDEDISGTCEALLS 485
+ N+ N+ L + ED E L++
Sbjct: 645 NANVNLSNKSGLTPLHLAAQEDRVNVAEVLVN 676
Score = 110 (43.8 bits), Expect = 9.8e-05, Sum P(2) = 9.8e-05
Identities = 56/246 (22%), Positives = 98/246 (39%)
Query: 205 KVNESILVLHDSDLGAKEKTTIYECVIREALALGRATKLQRAVKRNSTP-TTSQSAEKRK 263
KV E +L+ H + + A ++ + I A +G + + + ++P TT+ E
Sbjct: 372 KVME-LLLKHGASIQAVTESGLTP--IHVAAFMGHVNIVSQLMHHGASPNTTNVRGETAL 428
Query: 264 XXXXXXXXXXXFG-AVANGSCTDKKVGP---PLILATQAGDEDVIEILLKSKXXXXXXXX 319
V NG+ + K PL ++ + G D+++ LL+
Sbjct: 429 HMAARAGQTEVVRYLVQNGAQVEAKAKDDQTPLHISARLGKADIVQQLLQQ---GASPNA 485
Query: 320 XXXXGNSALHCALKTSMGLSQHILQNRIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQ 379
G + LH + + H + +LL+HGA ++ K G T LH+AA G +
Sbjct: 486 ATTSGYTPLHLSAREG-----H---EDVASVLLEHGASLAIITKKGFTPLHVAAKYGKIE 537
Query: 380 ALEDLIRKE--PDCINLKTIMMETPLFFAVKNDHMVCAEVLLRWGANSEVLNLRRERPID 437
L++K PD + TPL A D+ A +LL GA+ P+
Sbjct: 538 VANLLLQKNASPDASGKSGL---TPLHVAAHYDNQKVALLLLDQGASPHASAKNGYTPLH 594
Query: 438 FAKSQD 443
A ++
Sbjct: 595 IAAKKN 600
Score = 80 (33.2 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 30/119 (25%), Positives = 57/119 (47%)
Query: 22 IINSLLEDDKKQLINVSKRHFIDNSLD------------NADQQTAIVTKLLRVSCIFDS 69
+++ LLE+D K + + H D NAD ++ L ++ + +
Sbjct: 146 VVSLLLENDTKGKVRLPALHIAARKDDTKAAALLLQNDHNADVESKSGFTPLHIAAHYGN 205
Query: 70 VSCATSLVNGDLGPVALVNEVEESSGMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
++ AT L+N A V+ + +T LH+A++ A V+LLL + A+ D +++DG
Sbjct: 206 INVATLLLNRG----AAVDFTARND-ITPLHVASKRGNANMVKLLLDRGAKIDAKTRDG 259
Score = 64 (27.6 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 31/124 (25%), Positives = 49/124 (39%)
Query: 55 AIVTKL----LRVSCIFDSVSCATSLVNGDLGPVALVNEVEESSGMTALHLAAESHTARC 110
AI+TK L V+ + + A L+ + P + SG+T LH+AA +
Sbjct: 517 AIITKKGFTPLHVAAKYGKIEVANLLLQKNASP-----DASGKSGLTPLHVAAHYDNQKV 571
Query: 111 VELLLKKRARTDIRSKDGXXXXXXXXXXXXXXMDVIWNPDEYSVEDLVVILGQKNLTTVK 170
LLL + A +K+G MD+ EY + V ++ + V
Sbjct: 572 ALLLLDQGASPHASAKNGYTPLHIAAKKNQ--MDIATTLLEYGADANAVT--RQGIAPVH 627
Query: 171 LLSQ 174
L SQ
Sbjct: 628 LASQ 631
Score = 59 (25.8 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 12/39 (30%), Positives = 21/39 (53%)
Query: 90 VEESSGMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
+ +G+ ALHLA++ V L+++ A D +K G
Sbjct: 27 ISNQNGLNALHLASKEGHVEVVSELIQRGASVDAATKKG 65
Score = 59 (25.8 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 95 GMTALHLAAESHTARCVELLLKKRARTDIRSKD 127
G TALH+AA + V L++ A+ + ++KD
Sbjct: 424 GETALHMAARAGQTEVVRYLVQNGAQVEAKAKD 456
Score = 57 (25.1 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 14/44 (31%), Positives = 24/44 (54%)
Query: 85 ALVNEVEESSGMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
A VN + +G T L++AA+ + V+ LL A + ++DG
Sbjct: 89 ANVN-AQSQNGFTPLYMAAQENHLEVVKFLLDNGASQSLATEDG 131
Score = 56 (24.8 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 12/35 (34%), Positives = 20/35 (57%)
Query: 94 SGMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
+G T LH+A + + + +ELLLK A ++ G
Sbjct: 357 NGFTPLHIACKKNRIKVMELLLKHGASIQAVTESG 391
Score = 55 (24.4 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 10/34 (29%), Positives = 19/34 (55%)
Query: 94 SGMTALHLAAESHTARCVELLLKKRARTDIRSKD 127
+G++ LH+A + CV+LL++ D + D
Sbjct: 291 NGLSPLHMATQGDHLNCVQLLIQHNVPVDDVTND 324
Score = 55 (24.4 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 13/40 (32%), Positives = 22/40 (55%)
Query: 89 EVEESSGMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
+ + G+T LH A S + VE+LL + A ++K+G
Sbjct: 253 DAKTRDGLTPLHCGARSGHEQVVEMLLDRGAPILSKTKNG 292
>UNIPROTKB|F1NNX8 [details] [associations]
symbol:ANK3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007165 "signal transduction" evidence=IEA]
InterPro:IPR000488 Pfam:PF00531 InterPro:IPR002110 PRINTS:PR01415
PROSITE:PS50017 PROSITE:PS50088 SMART:SM00005 SMART:SM00248
GO:GO:0007165 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 Gene3D:1.10.533.10
InterPro:IPR011029 SUPFAM:SSF47986 InterPro:IPR000906 Pfam:PF00791
SMART:SM00218 PROSITE:PS51145 GeneTree:ENSGT00700000104348
EMBL:AADN02035197 EMBL:AADN02035198 EMBL:AADN02035199
IPI:IPI00821628 Ensembl:ENSGALT00000041032 ArrayExpress:F1NNX8
Uniprot:F1NNX8
Length = 1737
Score = 138 (53.6 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 83/354 (23%), Positives = 135/354 (38%)
Query: 95 GMTALHLAAESHTARCVELLLKKRARTDIRSKDGXXXXXXXXXXXXXXMDVIWNPDEYSV 154
G TALH+A+ + A V++L+ RA + +S++G + V + D +
Sbjct: 65 GNTALHIASLAGQAEVVKVLVTNRANVNAQSQNGFTPLYMAAQENHLEV-VKFLLDNGAS 123
Query: 155 EDLVVILGQKNLTTVKLLSQKTKELDEVAYANXXXXXXXXXXXXXXXXXDKVNESILVL- 213
+ L G L L Q ++ + N D + L+L
Sbjct: 124 QSLATEDGFTPLAVA--LQQGHDQVVSLLLENDTKGKVRLPALHIAARKDDTKAAALLLQ 181
Query: 214 --HDSDLGAKEKTTI------YECVIREALALGRATKLQRAVKRNSTPTTSQSAEKRKXX 265
H++D+ +K T Y + L L R + + + TP A KR
Sbjct: 182 NDHNADVESKSGFTPLHIAAHYGNINVATLLLNRGAAVDFTARNDITPL--HVASKRGNA 239
Query: 266 XXXXXXXXXFGAVANGSCTDKKVGPPLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGN 325
GA + D PL ++G E V+E+LL G
Sbjct: 240 NMVKLLLDR-GAKIDAKTRDGLT--PLHCGARSGHEQVVEMLLDR---GAPILSKTKNGL 293
Query: 326 SALHCALKTSMGLSQHILQNRIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLI 385
S LH A + H+ V +L++H V LTALH+AA G+ + + L+
Sbjct: 294 SPLHMATQ-----GDHL---NCVQLLIQHNVPVDDVTNDYLTALHVAAHCGHYKVAKVLL 345
Query: 386 RKEPDCINLKTIMMETPLFFAVKNDHMVCAEVLLRWGANSEVLNLRRERPIDFA 439
K+ + N K + TPL A K + + E+LL+ GA+ + + PI A
Sbjct: 346 DKKANP-NAKALNGFTPLHIACKKNRIKVMELLLKHGASIQAVTESGLTPIHVA 398
Score = 128 (50.1 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 49/166 (29%), Positives = 73/166 (43%)
Query: 275 FGAVANGSCTDKKVGPPLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKT 334
+GA AN + T + + P + LA+Q G D++ +LL G + LH A
Sbjct: 611 YGADAN-AVTRQGIAP-VHLASQDGHVDMVSLLLTRNANVNLSNKS---GLTPLHLA--- 662
Query: 335 SMGLSQHILQNRIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINL 394
+Q N + +L+ GA V Q K+G T LH+ GN + + L++ IN
Sbjct: 663 ----AQEDRVN-VAEVLVNQGAAVDAQTKMGYTPLHVGCHYGNIKIVNFLLQHSAK-INA 716
Query: 395 KTIMMETPLFFAVKNDHMVCAEVLLRWGANSEVLNLRRERPIDFAK 440
KT TPL A + H VLL+ GA L + + AK
Sbjct: 717 KTKNGYTPLHQAAQQGHTHIINVLLQHGAAPNELTVNGNTALAIAK 762
Score = 121 (47.7 bits), Expect = 7.3e-06, Sum P(2) = 7.3e-06
Identities = 56/212 (26%), Positives = 86/212 (40%)
Query: 276 GAVANGSCTDKKVGPPLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKTS 335
GA N + T PL L+ + G EDV +LL+ G + LH A K
Sbjct: 480 GASPNAATTSGYT--PLHLSAREGHEDVASVLLEH---GASLAIITKKGFTPLHVAAKYG 534
Query: 336 MGLSQHILQNRIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLK 395
+ + +LL+ A K GLT LH+AA N Q + L+ + +
Sbjct: 535 --------KIEVANLLLQKNASPDASGKSGLTPLHVAAHYDN-QKVALLLLDQGASPHAS 585
Query: 396 TIMMETPLFFAVKNDHMVCAEVLLRWGANSEVLNLRRERPIDFAKSQDMRF-LLKAANTC 454
TPL A K + M A LL +GA++ + + P+ A SQD ++ T
Sbjct: 586 AKNGYTPLHIAAKKNQMDIATTLLEYGADANAVTRQGIAPVHLA-SQDGHVDMVSLLLTR 644
Query: 455 HTNLAFLNQEKQNA-SLESDEDISGTCEALLS 485
+ N+ N+ L + ED E L++
Sbjct: 645 NANVNLSNKSGLTPLHLAAQEDRVNVAEVLVN 676
Score = 110 (43.8 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 56/246 (22%), Positives = 98/246 (39%)
Query: 205 KVNESILVLHDSDLGAKEKTTIYECVIREALALGRATKLQRAVKRNSTP-TTSQSAEKRK 263
KV E +L+ H + + A ++ + I A +G + + + ++P TT+ E
Sbjct: 372 KVME-LLLKHGASIQAVTESGLTP--IHVAAFMGHVNIVSQLMHHGASPNTTNVRGETAL 428
Query: 264 XXXXXXXXXXXFG-AVANGSCTDKKVGP---PLILATQAGDEDVIEILLKSKXXXXXXXX 319
V NG+ + K PL ++ + G D+++ LL+
Sbjct: 429 HMAARAGQTEVVRYLVQNGAQVEAKAKDDQTPLHISARLGKADIVQQLLQQ---GASPNA 485
Query: 320 XXXXGNSALHCALKTSMGLSQHILQNRIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQ 379
G + LH + + H + +LL+HGA ++ K G T LH+AA G +
Sbjct: 486 ATTSGYTPLHLSAREG-----H---EDVASVLLEHGASLAIITKKGFTPLHVAAKYGKIE 537
Query: 380 ALEDLIRKE--PDCINLKTIMMETPLFFAVKNDHMVCAEVLLRWGANSEVLNLRRERPID 437
L++K PD + TPL A D+ A +LL GA+ P+
Sbjct: 538 VANLLLQKNASPDASGKSGL---TPLHVAAHYDNQKVALLLLDQGASPHASAKNGYTPLH 594
Query: 438 FAKSQD 443
A ++
Sbjct: 595 IAAKKN 600
Score = 80 (33.2 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 30/119 (25%), Positives = 57/119 (47%)
Query: 22 IINSLLEDDKKQLINVSKRHFIDNSLD------------NADQQTAIVTKLLRVSCIFDS 69
+++ LLE+D K + + H D NAD ++ L ++ + +
Sbjct: 146 VVSLLLENDTKGKVRLPALHIAARKDDTKAAALLLQNDHNADVESKSGFTPLHIAAHYGN 205
Query: 70 VSCATSLVNGDLGPVALVNEVEESSGMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
++ AT L+N A V+ + +T LH+A++ A V+LLL + A+ D +++DG
Sbjct: 206 INVATLLLNRG----AAVDFTARND-ITPLHVASKRGNANMVKLLLDRGAKIDAKTRDG 259
Score = 64 (27.6 bits), Expect = 5.9e-05, Sum P(2) = 5.9e-05
Identities = 31/124 (25%), Positives = 49/124 (39%)
Query: 55 AIVTKL----LRVSCIFDSVSCATSLVNGDLGPVALVNEVEESSGMTALHLAAESHTARC 110
AI+TK L V+ + + A L+ + P + SG+T LH+AA +
Sbjct: 517 AIITKKGFTPLHVAAKYGKIEVANLLLQKNASP-----DASGKSGLTPLHVAAHYDNQKV 571
Query: 111 VELLLKKRARTDIRSKDGXXXXXXXXXXXXXXMDVIWNPDEYSVEDLVVILGQKNLTTVK 170
LLL + A +K+G MD+ EY + V ++ + V
Sbjct: 572 ALLLLDQGASPHASAKNGYTPLHIAAKKNQ--MDIATTLLEYGADANAVT--RQGIAPVH 627
Query: 171 LLSQ 174
L SQ
Sbjct: 628 LASQ 631
Score = 59 (25.8 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 12/39 (30%), Positives = 21/39 (53%)
Query: 90 VEESSGMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
+ +G+ ALHLA++ V L+++ A D +K G
Sbjct: 27 ISNQNGLNALHLASKEGHVEVVSELIQRGASVDAATKKG 65
Score = 59 (25.8 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 95 GMTALHLAAESHTARCVELLLKKRARTDIRSKD 127
G TALH+AA + V L++ A+ + ++KD
Sbjct: 424 GETALHMAARAGQTEVVRYLVQNGAQVEAKAKD 456
Score = 57 (25.1 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 14/44 (31%), Positives = 24/44 (54%)
Query: 85 ALVNEVEESSGMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
A VN + +G T L++AA+ + V+ LL A + ++DG
Sbjct: 89 ANVN-AQSQNGFTPLYMAAQENHLEVVKFLLDNGASQSLATEDG 131
Score = 56 (24.8 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 12/35 (34%), Positives = 20/35 (57%)
Query: 94 SGMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
+G T LH+A + + + +ELLLK A ++ G
Sbjct: 357 NGFTPLHIACKKNRIKVMELLLKHGASIQAVTESG 391
Score = 55 (24.4 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 10/34 (29%), Positives = 19/34 (55%)
Query: 94 SGMTALHLAAESHTARCVELLLKKRARTDIRSKD 127
+G++ LH+A + CV+LL++ D + D
Sbjct: 291 NGLSPLHMATQGDHLNCVQLLIQHNVPVDDVTND 324
Score = 55 (24.4 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 13/40 (32%), Positives = 22/40 (55%)
Query: 89 EVEESSGMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
+ + G+T LH A S + VE+LL + A ++K+G
Sbjct: 253 DAKTRDGLTPLHCGARSGHEQVVEMLLDRGAPILSKTKNG 292
>ZFIN|ZDB-GENE-040426-1268 [details] [associations]
symbol:msi2b "musashi homolog 2b (Drosophila)"
species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 ZFIN:ZDB-GENE-040426-1268 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 eggNOG:COG0724
HOGENOM:HOG000234441 HOVERGEN:HBG002295 KO:K14411
GeneTree:ENSGT00700000104255 HSSP:Q61474 EMBL:BX000438
EMBL:BX510988 EMBL:BX649247 EMBL:CR848815 EMBL:BC055251
IPI:IPI00481779 RefSeq:NP_957403.1 UniGene:Dr.82489 SMR:Q7SXT6
STRING:Q7SXT6 Ensembl:ENSDART00000100194 GeneID:394084
KEGG:dre:394084 CTD:394084 InParanoid:Q7SXT6 OMA:NYISASP
NextBio:20815041 Uniprot:Q7SXT6
Length = 408
Score = 145 (56.1 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 37/85 (43%), Positives = 48/85 (56%)
Query: 549 KIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKHEKSAAAA 608
KIFVGGL + + YFE+ FG +EDA + +T + RGFGFVTF++E
Sbjct: 111 KIFVGGLSANTVVEDVKQYFEQ-FGKVEDAMLMFDKTTNRH--RGFGFVTFENEDVVEKV 167
Query: 609 VQARFVTIMGKEVEIKSAVPKEVLF 633
+ F I K VE K A PKEV+F
Sbjct: 168 CEIHFHEINNKMVECKKAQPKEVMF 192
>RGD|620156 [details] [associations]
symbol:Ank2 "ankyrin 2, neuronal" species:10116 "Rattus
norvegicus" [GO:0002027 "regulation of heart rate" evidence=ISO]
[GO:0003283 "atrial septum development" evidence=ISO] [GO:0005200
"structural constituent of cytoskeleton" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005622 "intracellular"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005856
"cytoskeleton" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=ISO;IDA] [GO:0005887 "integral to plasma membrane"
evidence=ISO] [GO:0006874 "cellular calcium ion homeostasis"
evidence=ISO] [GO:0007399 "nervous system development"
evidence=IEP] [GO:0008104 "protein localization" evidence=ISO]
[GO:0010628 "positive regulation of gene expression" evidence=ISO]
[GO:0010881 "regulation of cardiac muscle contraction by regulation
of the release of sequestered calcium ion" evidence=ISO]
[GO:0010882 "regulation of cardiac muscle contraction by calcium
ion signaling" evidence=ISO] [GO:0014704 "intercalated disc"
evidence=ISO] [GO:0015459 "potassium channel regulator activity"
evidence=ISO] [GO:0016323 "basolateral plasma membrane"
evidence=ISO] [GO:0019899 "enzyme binding" evidence=ISO]
[GO:0019901 "protein kinase binding" evidence=ISO] [GO:0030018 "Z
disc" evidence=ISO] [GO:0030315 "T-tubule" evidence=ISO]
[GO:0030507 "spectrin binding" evidence=ISO] [GO:0030674 "protein
binding, bridging" evidence=ISO] [GO:0030913 "paranodal junction
assembly" evidence=IEP] [GO:0031430 "M band" evidence=ISO]
[GO:0031672 "A band" evidence=ISO] [GO:0033292 "T-tubule
organization" evidence=ISO] [GO:0033365 "protein localization to
organelle" evidence=ISO] [GO:0034394 "protein localization to cell
surface" evidence=ISO] [GO:0034613 "cellular protein localization"
evidence=ISO] [GO:0042383 "sarcolemma" evidence=ISO] [GO:0043005
"neuron projection" evidence=IDA] [GO:0043034 "costamere"
evidence=ISO] [GO:0043268 "positive regulation of potassium ion
transport" evidence=ISO] [GO:0044325 "ion channel binding"
evidence=ISO] [GO:0045121 "membrane raft" evidence=IDA] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO] [GO:0050821
"protein stabilization" evidence=ISO] [GO:0051117 "ATPase binding"
evidence=ISO] [GO:0051279 "regulation of release of sequestered
calcium ion into cytosol" evidence=ISO] [GO:0051597 "response to
methylmercury" evidence=IEP] [GO:0051924 "regulation of calcium ion
transport" evidence=ISO] [GO:0051928 "positive regulation of
calcium ion transport" evidence=ISO] [GO:0055117 "regulation of
cardiac muscle contraction" evidence=ISO] [GO:0060048 "cardiac
muscle contraction" evidence=ISO] [GO:0060307 "regulation of
ventricular cardiac muscle cell membrane repolarization"
evidence=ISO] [GO:0070972 "protein localization to endoplasmic
reticulum" evidence=ISO] [GO:0072659 "protein localization to
plasma membrane" evidence=ISO] [GO:0072661 "protein targeting to
plasma membrane" evidence=ISO] [GO:0086004 "regulation of cardiac
muscle cell contraction" evidence=ISO] [GO:0086005 "regulation of
ventricular cardiac muscle cell action potential" evidence=ISO]
[GO:0086014 "regulation of atrial cardiac muscle cell action
potential" evidence=ISO] [GO:0086015 "regulation of SA node cell
action potential" evidence=ISO] [GO:0086036 "regulation of cardiac
muscle cell membrane potential" evidence=ISO] [GO:0086066 "atrial
cardiac muscle cell to AV node cell communication" evidence=ISO]
[GO:0086070 "SA node cell to atrial cardiac muscle cell
communication" evidence=ISO] [GO:0086091 "regulation of heart rate
by cardiac conduction" evidence=ISO] [GO:1901018 "positive
regulation of potassium ion transmembrane transporter activity"
evidence=ISO] [GO:1901019 "regulation of calcium ion transmembrane
transporter activity" evidence=ISO] [GO:1901021 "positive
regulation of calcium ion transmembrane transporter activity"
evidence=ISO] [GO:2001257 "regulation of cation channel activity"
evidence=ISO] [GO:2001259 "positive regulation of cation channel
activity" evidence=ISO] InterPro:IPR002110 PRINTS:PR01415
PROSITE:PS50088 SMART:SM00248 RGD:620156 GO:GO:0005886
GO:GO:0005856 GO:GO:0005200 eggNOG:COG0666 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
GO:GO:0005102 GO:GO:0043005 GO:GO:0045121 HOGENOM:HOG000169277
HSSP:P16157 GO:GO:0051597 GO:GO:0030913 IPI:IPI00205634 EMBL:U65916
UniGene:Rn.232442 ProteinModelPortal:P97582 DIP:DIP-53073N
STRING:P97582 PhosphoSite:P97582 UCSC:RGD:620156 InParanoid:P97582
Genevestigator:P97582 Uniprot:P97582
Length = 843
Score = 124 (48.7 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 47/166 (28%), Positives = 72/166 (43%)
Query: 275 FGAVANGSCTDKKVGPPLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKT 334
+GA N + T + V PL LA+Q G D++ ++L+ G ++LH A +
Sbjct: 616 YGAETN-TVTKQGV-TPLHLASQEGHTDMVTLVLEK---GANIHMSTKSGLTSLHLAAEE 670
Query: 335 SMGLSQHILQNRIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINL 394
+ + IL KHGA KLG T L +A GN + + L+++ + +N
Sbjct: 671 D--------KVNVADILTKHGADQDAYTKLGYTPLIVACHYGNVKMVNFLLKQGAN-VNA 721
Query: 395 KTIMMETPLFFAVKNDHMVCAEVLLRWGANSEVLNLRRERPIDFAK 440
KT TPL A + H VLL+ GA + AK
Sbjct: 722 KTKNGYTPLHQAAQQGHTHIINVLLQHGAKPNATTANGNTALAIAK 767
Score = 102 (41.0 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 42/148 (28%), Positives = 61/148 (41%)
Query: 277 AVANGSCTDKKVGPPLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKTSM 336
A A S KK PL +A + G DV ++LL+ + G + L T +
Sbjct: 517 AGAAHSLATKKGFTPLHVAAKYGSLDVAKLLLQRRAAADSA------GKNGL-----TPL 565
Query: 337 GLSQHILQNRIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLKT 396
++ H ++ +LL+ GA K G T LHIAA Q L+ + N T
Sbjct: 566 HVAAHYDNQKVALLLLEKGASPHATAKNGYTPLHIAAKKNQMQIASTLLNYGAET-NTVT 624
Query: 397 IMMETPLFFAVKNDHMVCAEVLLRWGAN 424
TPL A + H ++L GAN
Sbjct: 625 KQGVTPLHLASQEGHTDMVTLVLEKGAN 652
Score = 101 (40.6 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 42/167 (25%), Positives = 74/167 (44%)
Query: 291 PLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKTSMGLSQHILQNRIVGI 350
PL +A ++ V +LL+ G + LH A K + Q +I
Sbjct: 564 PLHVAAHYDNQKVALLLLEK---GASPHATAKNGYTPLHIAAKKN--------QMQIAST 612
Query: 351 LLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLKTIMMETPLFFAVKND 410
LL +GA + K G+T LH+A+ G++ + ++ K + I++ T T L A + D
Sbjct: 613 LLNYGAETNTVTKQGVTPLHLASQEGHTDMVTLVLEKGAN-IHMSTKSGLTSLHLAAEED 671
Query: 411 HMVCAEVLLRWGANSEVLNLRRERPI----DFAKSQDMRFLLK-AAN 452
+ A++L + GA+ + P+ + + + FLLK AN
Sbjct: 672 KVNVADILTKHGADQDAYTKLGYTPLIVACHYGNVKMVNFLLKQGAN 718
Score = 76 (31.8 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 25/86 (29%), Positives = 38/86 (44%)
Query: 47 LDNADQQTAIVTKLLRVSCIFDSVSCATSLV----NGDLGPVALVNEVEESSGMTALHLA 102
L+N D + + L ++ D A L+ N D+ +VN ES G T LH+A
Sbjct: 148 LEN-DTKGKVRLPALHIAARKDDTKSAALLLQNDHNADVQSKMMVNRTTES-GFTPLHIA 205
Query: 103 AESHTARCVELLLKKRARTDIRSKDG 128
A LLL + A D +++G
Sbjct: 206 AHYGNVNVATLLLNRGAAVDFTARNG 231
Score = 73 (30.8 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 20/68 (29%), Positives = 38/68 (55%)
Query: 61 LRVSCIFDSVSCATSLVNGDLGPVALVNEVEESSGMTALHLAAESHTARCVELLLKKRAR 120
L ++ + +V+ AT L+N A V + +G+T LH+A++ V+LLL + +
Sbjct: 202 LHIAAHYGNVNVATLLLNRG----AAV-DFTARNGITPLHVASKRGNTNMVKLLLDRGGQ 256
Query: 121 TDIRSKDG 128
D +++DG
Sbjct: 257 IDAKTRDG 264
Score = 66 (28.3 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 16/40 (40%), Positives = 24/40 (60%)
Query: 89 EVEESSGMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
+ + G+T LH AA S + VELLL++ A R+K+G
Sbjct: 258 DAKTRDGLTPLHCAARSGHDQVVELLLERGAPLLARTKNG 297
Score = 64 (27.6 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 14/34 (41%), Positives = 21/34 (61%)
Query: 95 GMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
G T LH+AA+ + +LLL++RA D K+G
Sbjct: 528 GFTPLHVAAKYGSLDVAKLLLQRRAAADSAGKNG 561
Score = 63 (27.2 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 18/53 (33%), Positives = 32/53 (60%)
Query: 76 LVNGDLGPVALVNEVEESSGMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
LV LG + V+ + G TALH+A+ + A V++L+K+ A + +S++G
Sbjct: 44 LVQELLGRGSSVDSATKK-GNTALHIASLAGQAEVVKVLVKEGANINAQSQNG 95
Score = 62 (26.9 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 89 EVEESSGMTALHLAAESHTARCVELLLKKRARTDIRSKD 127
+V G TALH+AA + V LL+ A D R+++
Sbjct: 423 DVTNIRGETALHMAARAGEVEVVRCLLRNGALVDARARE 461
Score = 62 (26.9 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 17/56 (30%), Positives = 28/56 (50%)
Query: 73 ATSLVNGDLGPVALV--NEVEESSGMTALHLAAESHTARCVELLLKKRARTDIRSK 126
A +L G VA++ N+ + + ALH+AA + LLL+ D++SK
Sbjct: 133 AVALQQGHNQAVAILLENDTKGKVRLPALHIAARKDDTKSAALLLQNDHNADVQSK 188
Score = 58 (25.5 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 19/68 (27%), Positives = 30/68 (44%)
Query: 61 LRVSCIFDSVSCATSLVNGDLGPVALVNEVEESSGMTALHLAAESHTARCVELLLKKRAR 120
L V+ +D+ A L+ P A +G T LH+AA+ + + LL A
Sbjct: 565 LHVAAHYDNQKVALLLLEKGASPHATAK-----NGYTPLHIAAKKNQMQIASTLLNYGAE 619
Query: 121 TDIRSKDG 128
T+ +K G
Sbjct: 620 TNTVTKQG 627
Score = 56 (24.8 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 94 SGMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
+G+T LH+AA + LLL+K A +K+G
Sbjct: 560 NGLTPLHVAAHYDNQKVALLLLEKGASPHATAKNG 594
Score = 53 (23.7 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 13/44 (29%), Positives = 24/44 (54%)
Query: 85 ALVNEVEESSGMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
A +N + +G T L++AA+ + V+ LL+ A ++DG
Sbjct: 86 ANIN-AQSQNGFTPLYMAAQENHIDVVKYLLENGANQSTATEDG 128
Score = 51 (23.0 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 11/35 (31%), Positives = 20/35 (57%)
Query: 94 SGMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
+G T LH+A + + + +ELL+K A ++ G
Sbjct: 362 NGFTPLHIACKKNRIKVMELLVKYGAYIQAITESG 396
>FB|FBgn0011666 [details] [associations]
symbol:msi "musashi" species:7227 "Drosophila melanogaster"
[GO:0005634 "nucleus" evidence=IDA] [GO:0022416 "chaeta
development" evidence=IMP] [GO:0003723 "RNA binding" evidence=ISM]
[GO:0003729 "mRNA binding" evidence=ISS;NAS;TAS] [GO:0006397 "mRNA
processing" evidence=ISS] [GO:0017148 "negative regulation of
translation" evidence=IMP;TAS] [GO:0006417 "regulation of
translation" evidence=TAS] [GO:0045182 "translation regulator
activity" evidence=TAS] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001709 "cell fate determination" evidence=TAS]
[GO:0000900 "translation repressor activity, nucleic acid binding"
evidence=TAS] [GO:0019827 "stem cell maintenance" evidence=IMP]
[GO:0042078 "germ-line stem cell division" evidence=IMP]
[GO:0071456 "cellular response to hypoxia" evidence=IMP]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 EMBL:AE014297 GO:GO:0005634 GO:GO:0000166
GO:GO:0003729 Gene3D:3.30.70.330 GO:GO:0071456 GO:GO:0022416
GO:GO:0001709 GO:GO:0019827 GO:GO:0000900 GO:GO:0042078 KO:K14411
GeneTree:ENSGT00700000104255 HSSP:Q61474 ChiTaRS:msi
FlyBase:FBgn0011666 EMBL:BT133366 RefSeq:NP_001247303.1
RefSeq:NP_733108.2 UniGene:Dm.1334 SMR:Q8IMS8 MINT:MINT-296706
STRING:Q8IMS8 EnsemblMetazoa:FBtr0084881 EnsemblMetazoa:FBtr0305218
EnsemblMetazoa:FBtr0333664 GeneID:43087 KEGG:dme:Dmel_CG5099
UCSC:CG5099-RB CTD:43087 InParanoid:Q8IMS8 OMA:PIKAFAC
GenomeRNAi:43087 NextBio:832139 Uniprot:Q8IMS8
Length = 634
Score = 147 (56.8 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 54/189 (28%), Positives = 81/189 (42%)
Query: 549 KIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKHEKSAAAA 608
KIFVGG+ ++ + YF + FGP+E+ + Q K+ RGFGFVTF++E
Sbjct: 292 KIFVGGVSQDTSAEEVKAYFSQ-FGPVEETVMLMDQQTKRH--RGFGFVTFENEDVVDRV 348
Query: 609 VQARFVTIMGKEVEIKSAVPKEVLFAELQKQSAQQQESKHEHQARLGAKIPDERTMEQII 668
+ F TI K+VE K A PKE + A Q K LG ++P Q+I
Sbjct: 349 CEIHFHTIKNKKVECKKAQPKEAV------TPAAQLLQKRIMLGTLGVQLPT--APGQLI 400
Query: 669 -SRNAXXXXXXXXXXXXMPCRRVTEEATAEKSWAGRLLYGQPKTSSNESQAYLVESFEEK 727
+R A P + + A A + L+ P N + A + + +
Sbjct: 401 GARGAGVATMNPLAMLQNPTQLLQSPAAAAAAQQAALISQNPFQVQNAAAAASIAN--QA 458
Query: 728 SMPKWLRTF 736
K L T+
Sbjct: 459 GFGKLLTTY 467
>UNIPROTKB|P98179 [details] [associations]
symbol:RBM3 "Putative RNA-binding protein 3" species:9606
"Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0009409 "response to cold" evidence=IEA]
[GO:0035196 "production of miRNAs involved in gene silencing by
miRNA" evidence=IEA] [GO:0043023 "ribosomal large subunit binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISS] [GO:0030425
"dendrite" evidence=ISS] [GO:0006417 "regulation of translation"
evidence=ISS] [GO:0045727 "positive regulation of translation"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0015934
"large ribosomal subunit" evidence=ISS] [GO:0006396 "RNA
processing" evidence=TAS] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
GO:GO:0005737 GO:GO:0000166 GO:GO:0006412 GO:GO:0030425
GO:GO:0009409 Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0006396
GO:GO:0045727 eggNOG:COG0724 GO:GO:0015934 HOVERGEN:HBG107480
HOGENOM:HOG000276232 OrthoDB:EOG4HHP40 GO:GO:0035196 EMBL:AF196969
GO:GO:0043023 EMBL:U28686 EMBL:BC006825 IPI:IPI00024320 PIR:G01859
RefSeq:NP_006734.1 UniGene:Hs.301404 ProteinModelPortal:P98179
SMR:P98179 IntAct:P98179 MINT:MINT-5002714 STRING:P98179
PhosphoSite:P98179 DMDM:1710620 PaxDb:P98179 PeptideAtlas:P98179
PRIDE:P98179 DNASU:5935 Ensembl:ENST00000376755
Ensembl:ENST00000376759 GeneID:5935 KEGG:hsa:5935 UCSC:uc004dkf.2
CTD:5935 GeneCards:GC0XP048432 HGNC:HGNC:9900 HPA:HPA003624
MIM:300027 neXtProt:NX_P98179 PharmGKB:PA34265 InParanoid:P98179
KO:K13186 OMA:SDAMRAM PhylomeDB:P98179 ChiTaRS:RBM3 GenomeRNAi:5935
NextBio:23136 ArrayExpress:P98179 Bgee:P98179 CleanEx:HS_RBM3
Genevestigator:P98179 GermOnline:ENSG00000102317 Uniprot:P98179
Length = 157
Score = 122 (48.0 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 30/81 (37%), Positives = 48/81 (59%)
Query: 547 KSKIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKHEKSAA 606
+ K+FVGGL F D +L +F FGPI + V + E Q SRGFGF+TF + + A+
Sbjct: 5 EGKLFVGGLNFNTDEQALEDHFSS-FGPISEVVVVK-DRETQR-SRGFGFITFTNPEHAS 61
Query: 607 AAVQA-RFVTIMGKEVEIKSA 626
A++A ++ G+++ + A
Sbjct: 62 VAMRAMNGESLDGRQIRVDHA 82
>FB|FBgn0004838 [details] [associations]
symbol:Hrb27C "Heterogeneous nuclear ribonucleoprotein at
27C" species:7227 "Drosophila melanogaster" [GO:0030529
"ribonucleoprotein complex" evidence=ISS;NAS;IDA;IPI] [GO:0005730
"nucleolus" evidence=IDA] [GO:0003697 "single-stranded DNA binding"
evidence=IDA] [GO:0005654 "nucleoplasm" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0006397 "mRNA processing"
evidence=ISS] [GO:0003729 "mRNA binding" evidence=ISS;NAS]
[GO:0048027 "mRNA 5'-UTR binding" evidence=NAS;TAS] [GO:0007319
"negative regulation of oskar mRNA translation" evidence=TAS]
[GO:0003730 "mRNA 3'-UTR binding" evidence=IDA;TAS] [GO:0007317
"regulation of pole plasm oskar mRNA localization" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0045451 "pole
plasm oskar mRNA localization" evidence=IMP] [GO:0048024
"regulation of mRNA splicing, via spliceosome" evidence=IMP]
[GO:0007298 "border follicle cell migration" evidence=IMP]
[GO:0045727 "positive regulation of translation" evidence=IDA]
[GO:0043234 "protein complex" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0007411 "axon guidance" evidence=IMP]
[GO:0046331 "lateral inhibition" evidence=IMP] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0005737 GO:GO:0007411 GO:GO:0043234 GO:GO:0005654
EMBL:AE014134 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0007298
GO:GO:0048027 GO:GO:0003730 GO:GO:0003697 GO:GO:0030529
GO:GO:0046331 GO:GO:0045727 GO:GO:0048024 GO:GO:0007319
eggNOG:COG0724 GO:GO:0045451 KO:K14411 GeneTree:ENSGT00700000104255
EMBL:X62639 EMBL:DQ062784 EMBL:AY069699 EMBL:AY128430 EMBL:S51720
PIR:D41732 RefSeq:NP_001162897.1 RefSeq:NP_001162898.1
RefSeq:NP_001245917.1 RefSeq:NP_001245918.1 RefSeq:NP_001245919.1
RefSeq:NP_476869.1 RefSeq:NP_723228.1 RefSeq:NP_723229.1
UniGene:Dm.1997 ProteinModelPortal:P48809 SMR:P48809 IntAct:P48809
MINT:MINT-939547 STRING:P48809 PaxDb:P48809
EnsemblMetazoa:FBtr0079346 EnsemblMetazoa:FBtr0079347
EnsemblMetazoa:FBtr0079348 EnsemblMetazoa:FBtr0301403
EnsemblMetazoa:FBtr0301404 EnsemblMetazoa:FBtr0307030
EnsemblMetazoa:FBtr0307031 EnsemblMetazoa:FBtr0307032 GeneID:33968
KEGG:dme:Dmel_CG10377 CTD:33968 FlyBase:FBgn0004838
InParanoid:P48809 OMA:GGYDMYN OrthoDB:EOG4CJSZQ PhylomeDB:P48809
ChiTaRS:Hrb27C GenomeRNAi:33968 NextBio:786189 Bgee:P48809
GermOnline:CG10377 Uniprot:P48809
Length = 421
Score = 144 (55.7 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 30/82 (36%), Positives = 49/82 (59%)
Query: 549 KIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKHEKSAAAA 608
K+F+GGLP + L +F + +G + + V + EK+ SRGFGF++F+ E S
Sbjct: 97 KVFLGGLPSNVTETDLRTFFNR-YGKVTEV-VIMYDQEKKK-SRGFGFLSFEEESSVEHV 153
Query: 609 VQARFVTIMGKEVEIKSAVPKE 630
R++ + GK+VEIK A P++
Sbjct: 154 TNERYINLNGKQVEIKKAEPRD 175
>UNIPROTKB|J9NTH2 [details] [associations]
symbol:ANK2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007165 "signal transduction" evidence=IEA]
InterPro:IPR000488 Pfam:PF00531 InterPro:IPR002110 Pfam:PF00023
PRINTS:PR01415 PROSITE:PS50017 PROSITE:PS50088 SMART:SM00005
SMART:SM00248 GO:GO:0007165 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 Gene3D:1.10.533.10
InterPro:IPR011029 SUPFAM:SSF47986 InterPro:IPR000906 Pfam:PF00791
SMART:SM00218 PROSITE:PS51145 GeneTree:ENSGT00700000104348
EMBL:AAEX03016833 EMBL:AAEX03016831 EMBL:AAEX03016832
Ensembl:ENSCAFT00000044934 Uniprot:J9NTH2
Length = 2063
Score = 125 (49.1 bits), Expect = 2.2e-06, Sum P(3) = 2.2e-06
Identities = 49/166 (29%), Positives = 70/166 (42%)
Query: 275 FGAVANGSCTDKKVGPPLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKT 334
+GA N K+ PL LA+Q G D++ +LL G ++LH A
Sbjct: 668 YGAETN--IVTKQGVTPLHLASQEGHTDMVTLLLDK---GANIHMSTKSGLTSLHLA--- 719
Query: 335 SMGLSQHILQNRIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINL 394
+Q N + IL KHGA KLG T L +A GN + + L+++ + +N
Sbjct: 720 ----AQEDKVN-VADILTKHGADQDAHTKLGYTPLIVACHYGNVKMVNFLLKQGAN-VNA 773
Query: 395 KTIMMETPLFFAVKNDHMVCAEVLLRWGANSEVLNLRRERPIDFAK 440
KT TPL A + H VLL+ GA + AK
Sbjct: 774 KTKNGYTPLHQAAQQGHTHIINVLLQHGAKPNATTANGNTALAIAK 819
Score = 117 (46.2 bits), Expect = 0.00029, Sum P(4) = 0.00029
Identities = 63/261 (24%), Positives = 100/261 (38%)
Query: 291 PLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKT-SMGLSQHILQNRIVG 349
PL ++ + G DV +LL++ G + LH A K S+ +++ +LQ R
Sbjct: 550 PLHISAREGQVDVASVLLEA---GAAHSLATKKGFTPLHVAAKYGSLDVAKLLLQRR--- 603
Query: 350 ILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLKTIMMETPLFFAVKN 409
A K GLT LH+AA N + L+ K + TPL A K
Sbjct: 604 ------AAADSAGKNGLTPLHVAAHYDNQKVALLLLEKGASP-HATAKNGYTPLHIAAKK 656
Query: 410 DHMVCAEVLLRWGANSEVLNLRRERPIDFAKSQ---DMRFLL--KAANTCHTNLAFLNQE 464
+ M A LL +GA + ++ + P+ A + DM LL K AN + + L
Sbjct: 657 NQMQIASTLLNYGAETNIVTKQGVTPLHLASQEGHTDMVTLLLDKGANIHMSTKSGLT-- 714
Query: 465 KQNASLESDEDISGTCEALLSMVDDNSNTERICSGTKIEVCKYYESHSGCIRGSKCFYAL 524
+ L + ED + L D ++ I C Y G ++
Sbjct: 715 --SLHLAAQEDKVNVADILTKHGADQDAHTKLGYTPLIVACHY-----GNVKMVNFLLKQ 767
Query: 525 GEEQHRKMNPGMCMIHASTQE 545
G + K G +H + Q+
Sbjct: 768 GANVNAKTKNGYTPLHQAAQQ 788
Score = 76 (31.8 bits), Expect = 2.2e-06, Sum P(3) = 2.2e-06
Identities = 25/86 (29%), Positives = 38/86 (44%)
Query: 47 LDNADQQTAIVTKLLRVSCIFDSVSCATSLV----NGDLGPVALVNEVEESSGMTALHLA 102
L+N D + + L ++ D A L+ N D+ +VN ES G T LH+A
Sbjct: 200 LEN-DTKGKVRLPALHIAARKDDTKSAALLLQNDHNADVQSKMMVNRTTES-GFTPLHIA 257
Query: 103 AESHTARCVELLLKKRARTDIRSKDG 128
A LLL + A D +++G
Sbjct: 258 AHYGNVNVATLLLNRGAAVDFTARNG 283
Score = 73 (30.8 bits), Expect = 8.9e-05, Sum P(4) = 8.9e-05
Identities = 20/68 (29%), Positives = 38/68 (55%)
Query: 61 LRVSCIFDSVSCATSLVNGDLGPVALVNEVEESSGMTALHLAAESHTARCVELLLKKRAR 120
L ++ + +V+ AT L+N A V + +G+T LH+A++ V+LLL + +
Sbjct: 254 LHIAAHYGNVNVATLLLNRG----AAV-DFTARNGITPLHVASKRGNTNMVKLLLDRGGQ 308
Query: 121 TDIRSKDG 128
D +++DG
Sbjct: 309 IDAKTRDG 316
Score = 65 (27.9 bits), Expect = 0.00052, Sum P(4) = 0.00052
Identities = 15/33 (45%), Positives = 21/33 (63%)
Query: 96 MTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
+TALH+AA R +LLL KRA + R+ +G
Sbjct: 383 LTALHVAAHCGHYRVTKLLLDKRANPNARALNG 415
Score = 64 (27.6 bits), Expect = 0.00064, Sum P(4) = 0.00064
Identities = 14/34 (41%), Positives = 21/34 (61%)
Query: 95 GMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
G T LH+AA+ + +LLL++RA D K+G
Sbjct: 580 GFTPLHVAAKYGSLDVAKLLLQRRAAADSAGKNG 613
Score = 63 (27.2 bits), Expect = 0.00080, Sum P(4) = 0.00080
Identities = 18/53 (33%), Positives = 32/53 (60%)
Query: 76 LVNGDLGPVALVNEVEESSGMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
LV LG + V+ + G TALH+A+ + A V++L+K+ A + +S++G
Sbjct: 96 LVQELLGRGSSVDSATKK-GNTALHIASLAGQAEVVKVLVKEGANINAQSQNG 147
Score = 63 (27.2 bits), Expect = 0.00080, Sum P(4) = 0.00080
Identities = 20/68 (29%), Positives = 31/68 (45%)
Query: 61 LRVSCIFDSVSCATSLVNGDLGPVALVNEVEESSGMTALHLAAESHTARCVELLLKKRAR 120
L V+ +D+ A L+ P A +G T LH+AA+ + + LL A
Sbjct: 617 LHVAAHYDNQKVALLLLEKGASPHATAK-----NGYTPLHIAAKKNQMQIASTLLNYGAE 671
Query: 121 TDIRSKDG 128
T+I +K G
Sbjct: 672 TNIVTKQG 679
Score = 62 (26.9 bits), Expect = 0.00099, Sum P(4) = 0.00099
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 89 EVEESSGMTALHLAAESHTARCVELLLKKRARTDIRSKD 127
+V G TALH+AA + V LL+ A D R+++
Sbjct: 475 DVTNIRGETALHMAARAGQVEVVRCLLRNGALVDARARE 513
Score = 62 (26.9 bits), Expect = 0.00099, Sum P(4) = 0.00099
Identities = 15/40 (37%), Positives = 23/40 (57%)
Query: 89 EVEESSGMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
+ + G+T LH AA S + ELLL++ A R+K+G
Sbjct: 310 DAKTRDGLTPLHCAARSGHDQVAELLLERGAPLLARTKNG 349
Score = 62 (26.9 bits), Expect = 0.00099, Sum P(4) = 0.00099
Identities = 17/56 (30%), Positives = 28/56 (50%)
Query: 73 ATSLVNGDLGPVALV--NEVEESSGMTALHLAAESHTARCVELLLKKRARTDIRSK 126
A +L G VA++ N+ + + ALH+AA + LLL+ D++SK
Sbjct: 185 AVALQQGHNQAVAILLENDTKGKVRLPALHIAARKDDTKSAALLLQNDHNADVQSK 240
Score = 56 (24.8 bits), Expect = 2.2e-06, Sum P(3) = 2.2e-06
Identities = 30/103 (29%), Positives = 43/103 (41%)
Query: 749 RHPLEGKYALSSLKTDFKAVCGLELDHAS-LGYSKLSDFLRTLPDLCHVKAGPIGKNGSP 807
R+ LEG + SL++ F + L HAS L S + D +P H + + K
Sbjct: 922 RYSLEGARS-DSLRS-FSSDRSHTLSHASYLRDSAMIDDTMVIPS--H-QVSTLAKEAER 976
Query: 808 NHMVLVPSPPKQKWGALQLSKNGNPSSPVNSASDSNECDRNDS 850
N L WG L SSP++S S DR++S
Sbjct: 977 NSYRL-------SWGTENLDNVALSSSPIHSGRSSPCLDRDNS 1012
Score = 51 (23.0 bits), Expect = 4.6e-05, Sum P(4) = 4.6e-05
Identities = 23/72 (31%), Positives = 30/72 (41%)
Query: 556 PFFLDSDSLGGY--FEKHFGPIE-DARVAEF--QTEKQSVSRGF-GFVTFKHEKSAAAAV 609
P + D GY F+ E D+ E QT K+ V + F G E+S+
Sbjct: 1638 PIVSEEDISVGYSTFQDCIPKAEGDSSATELFPQTHKEQVQQDFSGKTQGLPEESSLECQ 1697
Query: 610 QARFVTIMGKEV 621
Q FVT G EV
Sbjct: 1698 QEYFVTTPGTEV 1709
Score = 37 (18.1 bits), Expect = 4.6e-05, Sum P(4) = 4.6e-05
Identities = 9/27 (33%), Positives = 13/27 (48%)
Query: 709 PKTSSNESQAYLVESFEEKSMPKWLRT 735
P T +E+Q ES P+ +RT
Sbjct: 1705 PGTEVSETQKPTAESASPSKTPEEIRT 1731
>UNIPROTKB|Q5ZME1 [details] [associations]
symbol:HNRNPA2B1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0043047 "single-stranded telomeric DNA binding"
evidence=IEA] [GO:0048025 "negative regulation of mRNA splicing,
via spliceosome" evidence=IEA] [GO:0050658 "RNA transport"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0097157 "pre-mRNA intronic binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005634 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0097157 GO:GO:0048025 eggNOG:COG0724 HOVERGEN:HBG002295
HOGENOM:HOG000234442 OrthoDB:EOG4HQDKF CTD:3181
GeneTree:ENSGT00700000104376 KO:K13158 OMA:HYSARTS EMBL:AC140791
EMBL:AJ719443 IPI:IPI00651336 RefSeq:NP_001026156.1
UniGene:Gga.22131 SMR:Q5ZME1 IntAct:Q5ZME1 STRING:Q5ZME1
Ensembl:ENSGALT00000017975 GeneID:420627 KEGG:gga:420627
InParanoid:Q5ZME1 NextBio:20823513 Uniprot:Q5ZME1
Length = 349
Score = 142 (55.0 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 37/87 (42%), Positives = 51/87 (58%)
Query: 544 QEFKSKIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKHEK 603
++F+ K+F+GGL F +SL Y+E+ +G + D V K+S RGFGFVTF
Sbjct: 14 EQFR-KLFIGGLSFETTEESLRNYYEQ-WGKLTDCVVMRDPASKRS--RGFGFVTFSSMA 69
Query: 604 SAAAAVQARFVTIMGKEVEIKSAVPKE 630
AA+ AR TI G+ VE K AV +E
Sbjct: 70 EVDAAMAARPHTIDGRVVEPKRAVARE 96
>UNIPROTKB|H0YHB7 [details] [associations]
symbol:MSI1 "RNA-binding protein Musashi homolog 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
EMBL:AC003982 HGNC:HGNC:7330 Ensembl:ENST00000546985 Uniprot:H0YHB7
Length = 233
Score = 137 (53.3 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 35/84 (41%), Positives = 46/84 (54%)
Query: 549 KIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKHEKSAAAA 608
KIFVGGL + + YFE+ FG ++DA + +T + RGFGFVTF+ E
Sbjct: 42 KIFVGGLSVNTTVEDVKQYFEQ-FGKVDDAMLMFDKTTNRH--RGFGFVTFESEDIVEKV 98
Query: 609 VQARFVTIMGKEVEIKSAVPKEVL 632
+ F I K VE K A PKEV+
Sbjct: 99 CEIHFHEINNKMVECKKAQPKEVM 122
>TAIR|locus:2037633 [details] [associations]
symbol:RBP1 "RNA-binding protein 1" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0003727 "single-stranded RNA binding"
evidence=IDA] [GO:0008283 "cell proliferation" evidence=TAS]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 EMBL:CP002684 GO:GO:0000166 GO:GO:0008283
GO:GO:0003727 Gene3D:3.30.70.330 EMBL:AB077822 KO:K14411
EMBL:AC082643 HSSP:Q61474 EMBL:AY054536 EMBL:AY064643
IPI:IPI00548887 PIR:F96618 RefSeq:NP_176143.1 UniGene:At.17236
ProteinModelPortal:Q9C652 SMR:Q9C652 IntAct:Q9C652 STRING:Q9C652
PRIDE:Q9C652 EnsemblPlants:AT1G58470.1 GeneID:842216
KEGG:ath:AT1G58470 TAIR:At1g58470 InParanoid:Q9C652 OMA:VTYDSED
PhylomeDB:Q9C652 ProtClustDB:CLSN2914680 Genevestigator:Q9C652
Uniprot:Q9C652
Length = 360
Score = 142 (55.0 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 39/107 (36%), Positives = 55/107 (51%)
Query: 526 EEQHRKMNPGMCMIHAS--TQEFKSKIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEF 583
E + ++MN G+ + ++ T K KIFVGGL + YFE+ FG D V
Sbjct: 97 ERKVQQMNGGLREMSSNGVTSRTK-KIFVGGLSSNTTEEEFKSYFER-FGRTTDVVVMHD 154
Query: 584 QTEKQSVSRGFGFVTFKHEKSAAAAVQARFVTIMGKEVEIKSAVPKE 630
+ RGFGFVT+ E S +Q+ F + K VE+K A+PKE
Sbjct: 155 GVTNRP--RGFGFVTYDSEDSVEVVMQSNFHELSDKRVEVKRAIPKE 199
>RGD|1311691 [details] [associations]
symbol:Ripk4 "receptor-interacting serine-threonine kinase 4"
species:10116 "Rattus norvegicus" [GO:0002009 "morphogenesis of an
epithelium" evidence=IEA;ISO] [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA;ISO] InterPro:IPR002110 InterPro:IPR000719
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PRINTS:PR01415 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 PROSITE:PS50088 SMART:SM00248 RGD:1311691
GO:GO:0005524 GO:GO:0005634 GO:GO:0002009 GO:GO:0005737
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
GeneTree:ENSGT00550000074536 OMA:DLRFRII OrthoDB:EOG4XD3QJ
IPI:IPI00191644 ProteinModelPortal:D4AAK5
Ensembl:ENSRNOT00000002206 UCSC:RGD:1311691 Uniprot:D4AAK5
Length = 786
Score = 117 (46.2 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 42/149 (28%), Positives = 66/149 (44%)
Query: 292 LILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKTSMGLSQHILQNRIVGIL 351
L A Q GDE +LL+ G + +H A QH +N IV L
Sbjct: 510 LHFAAQNGDEASTRLLLEKNASVNEVDFE---GRTPMHVAC-------QHGQEN-IVRTL 558
Query: 352 LKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDC-INLKTIMMETPLFFAVKND 410
L+ G V Q K LH AA G+ ++ L+ K+P +N +T+ TPL A +
Sbjct: 559 LRRGVDVGLQGKDAWLPLHYAAWQGHLPIVK-LLAKQPGVSVNAQTLDGRTPLHLAAQRG 617
Query: 411 HMVCAEVLLRWGANSEVLNLRRERPIDFA 439
H A +L+ ++ + +L+ + P+ A
Sbjct: 618 HYRVARILIDLSSDINICSLQAQTPLHVA 646
Score = 114 (45.2 bits), Expect = 5.3e-06, Sum P(2) = 5.3e-06
Identities = 39/141 (27%), Positives = 64/141 (45%)
Query: 291 PLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKTSMGLSQHILQNRIVGI 350
PL +A + G +LL G +ALH A + H+ V +
Sbjct: 642 PLHVAAETGHTSTARLLLHR---GAGKEALTSEGYTALHLAARNG-----HLAT---VKL 690
Query: 351 LLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLKTIMMETPLFFAVKND 410
L++ A V + L TALH+AA G+S+ +E+L+ D I+L + L A +
Sbjct: 691 LIEEKADVLARGPLNQTALHLAAARGHSEVVEELV--SADLIDLSDEQGLSALHLAAQGR 748
Query: 411 HMVCAEVLLRWGANSEVLNLR 431
H E+LL+ GA+ + +L+
Sbjct: 749 HSQTVEILLKHGAHINLQSLK 769
Score = 107 (42.7 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 31/83 (37%), Positives = 42/83 (50%)
Query: 347 IVGILLKH-GAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLKTIMMETPLFF 405
IV +L K G V+ Q G T LH+AA G+ + LI D IN+ ++ +TPL
Sbjct: 587 IVKLLAKQPGVSVNAQTLDGRTPLHLAAQRGHYRVARILIDLSSD-INICSLQAQTPLHV 645
Query: 406 AVKNDHMVCAEVLLRWGANSEVL 428
A + H A +LL GA E L
Sbjct: 646 AAETGHTSTARLLLHRGAGKEAL 668
Score = 81 (33.6 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 28/113 (24%), Positives = 53/113 (46%)
Query: 15 TDLETTLIINSLLEDDKKQLINVSKRHFIDNSLDNADQQTAIVTKLLRVSCIFDSVSCAT 74
TD++ ++++++ D +L+ + + +D LD++ LL ++ C
Sbjct: 405 TDIQKKKLVDAIVSGDTNKLMKILQPQDVDLVLDSS-------ASLLHLAVEAGQEECVK 457
Query: 75 SLVNGDLGPVALVNEVEESSGMTALHLAAESHTARCVELLLKKRARTDIRSKD 127
L+ + P L N+ G T LH+A E VELLL ++ T + +KD
Sbjct: 458 WLLLNNANP-NLTNK----KGSTPLHMAVERRGRGIVELLLARK--TSVNAKD 503
Score = 62 (26.9 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 16/59 (27%), Positives = 30/59 (50%)
Query: 75 SLVNGDLGPVALVNEVEE-----SSGMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
++V+GD + + + ++ S + LHLA E+ CV+ LL A ++ +K G
Sbjct: 415 AIVSGDTNKLMKILQPQDVDLVLDSSASLLHLAVEAGQEECVKWLLLNNANPNLTNKKG 473
>UNIPROTKB|F6VZ39 [details] [associations]
symbol:RBM38 "RNA-binding protein 38" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AL109955
HGNC:HGNC:15818 IPI:IPI00927190 ProteinModelPortal:F6VZ39
SMR:F6VZ39 PRIDE:F6VZ39 Ensembl:ENST00000344785 ArrayExpress:F6VZ39
Bgee:F6VZ39 Uniprot:F6VZ39
Length = 123
Score = 120 (47.3 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 35/90 (38%), Positives = 50/90 (55%)
Query: 539 IHASTQEFK-SKIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQS-VSRGFGF 596
+H S ++ +KIFVGGLP+ SL YFE FG IE+A V T++Q+ SRG+GF
Sbjct: 1 MHGSQKDTTFTKIFVGGLPYHTTDASLRKYFEG-FGDIEEAVVI---TDRQTGKSRGYGF 56
Query: 597 VTFKHEKSAAAAVQARFVTIMGKEVEIKSA 626
VT +A A + I G++ + A
Sbjct: 57 VTMADRAAAERACKDPNPIIDGRKANVNLA 86
>UNIPROTKB|J3KTC1 [details] [associations]
symbol:MSI2 "RNA-binding protein Musashi homolog 2"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
HGNC:HGNC:18585 ChiTaRS:MSI2 EMBL:AC005325 EMBL:AC007431
EMBL:AC015883 EMBL:AC091181 Ensembl:ENST00000579590 Uniprot:J3KTC1
Length = 141
Score = 120 (47.3 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 32/82 (39%), Positives = 42/82 (51%)
Query: 548 SKIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKHEKSAAA 607
SK+F+GGL + DSL YF K FG I + V T K+S RGFGFVTF S
Sbjct: 17 SKMFIGGLSWQTSPDSLRDYFSK-FGEIRECMVMRDPTTKRS--RGFGFVTFADPASVDK 73
Query: 608 AVQARFVTIMGKEVEIKSAVPK 629
+ + K ++ K A P+
Sbjct: 74 VLGQPHHELDSKTIDPKVAFPR 95
>UNIPROTKB|I3L5X7 [details] [associations]
symbol:RBM3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00700000104309 CTD:5935 KO:K13186 OMA:SDAMRAM
EMBL:FP325173 RefSeq:NP_001230348.1 UniGene:Ssc.3311
Ensembl:ENSSSCT00000030983 GeneID:100627807 KEGG:ssc:100627807
Uniprot:I3L5X7
Length = 156
Score = 120 (47.3 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 30/81 (37%), Positives = 48/81 (59%)
Query: 547 KSKIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKHEKSAA 606
+ K+FVGGL F D +L +F FGPI + V + E Q SRGFGF+TF + + A+
Sbjct: 5 EGKLFVGGLNFNTDEQALEDHFSS-FGPISEVVVVK-DRETQR-SRGFGFITFTNPEHAS 61
Query: 607 AAVQA-RFVTIMGKEVEIKSA 626
A++A ++ G+++ + A
Sbjct: 62 NAMRAMNGESLDGRQIRVDHA 82
>MGI|MGI:1099460 [details] [associations]
symbol:Rbm3 "RNA binding motif protein 3" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0006412 "translation"
evidence=IDA] [GO:0006417 "regulation of translation" evidence=IDA]
[GO:0006950 "response to stress" evidence=IEA] [GO:0009409
"response to cold" evidence=IDA] [GO:0015934 "large ribosomal
subunit" evidence=ISO] [GO:0030425 "dendrite" evidence=ISO]
[GO:0035196 "production of miRNAs involved in gene silencing by
miRNA" evidence=IDA] [GO:0042995 "cell projection" evidence=IEA]
[GO:0043023 "ribosomal large subunit binding" evidence=IPI]
[GO:0045727 "positive regulation of translation" evidence=ISO]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 MGI:MGI:1099460 GO:GO:0005634 GO:GO:0005737
GO:GO:0000166 GO:GO:0006412 GO:GO:0030425 GO:GO:0009409
Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0045727 eggNOG:COG0724
HOVERGEN:HBG107480 HOGENOM:HOG000276232 OrthoDB:EOG4HHP40
GO:GO:0035196 GO:GO:0043023 CTD:5935 KO:K13186 EMBL:AB016424
EMBL:AY052560 EMBL:BC006580 IPI:IPI00130883 RefSeq:NP_001159882.1
RefSeq:NP_001159883.1 UniGene:Mm.128512 UniGene:Mm.360569
ProteinModelPortal:O89086 SMR:O89086 IntAct:O89086 STRING:O89086
PhosphoSite:O89086 REPRODUCTION-2DPAGE:IPI00130883 PaxDb:O89086
PRIDE:O89086 Ensembl:ENSMUST00000115615 Ensembl:ENSMUST00000115619
Ensembl:ENSMUST00000115621 GeneID:19652 KEGG:mmu:19652
NextBio:296916 Bgee:O89086 CleanEx:MM_RBM3 Genevestigator:O89086
GermOnline:ENSMUSG00000031167 Uniprot:O89086
Length = 153
Score = 120 (47.3 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 30/81 (37%), Positives = 48/81 (59%)
Query: 547 KSKIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKHEKSAA 606
+ K+FVGGL F D +L +F FGPI + V + E Q SRGFGF+TF + + A+
Sbjct: 5 EGKLFVGGLNFNTDEQALEDHFSS-FGPISEVVVVK-DRETQR-SRGFGFITFTNPEHAS 61
Query: 607 AAVQA-RFVTIMGKEVEIKSA 626
A++A ++ G+++ + A
Sbjct: 62 DAMRAMNGESLDGRQIRVDHA 82
>UNIPROTKB|G3V6P6 [details] [associations]
symbol:Rbm3 "Putative RNA-binding protein 3" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0009409 "response to cold"
evidence=IEA] [GO:0035196 "production of miRNAs involved in gene
silencing by miRNA" evidence=IEA] [GO:0043023 "ribosomal large
subunit binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
RGD:620145 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00700000104309 CTD:5935 KO:K13186 OMA:SDAMRAM
RefSeq:NP_446148.1 UniGene:Rn.18057 GeneID:114488 KEGG:rno:114488
NextBio:618509 EMBL:CH474078 Ensembl:ENSRNOT00000007367
Uniprot:G3V6P6
Length = 156
Score = 120 (47.3 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 30/81 (37%), Positives = 48/81 (59%)
Query: 547 KSKIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKHEKSAA 606
+ K+FVGGL F D +L +F FGPI + V + E Q SRGFGF+TF + + A+
Sbjct: 5 EGKLFVGGLNFNTDEQALEDHFSS-FGPISEVVVVK-DRETQR-SRGFGFITFTNPEHAS 61
Query: 607 AAVQA-RFVTIMGKEVEIKSA 626
A++A ++ G+++ + A
Sbjct: 62 DAMRAMNGESLDGRQIRVDHA 82
>RGD|1563684 [details] [associations]
symbol:Hnrnpa0 "heterogeneous nuclear ribonucleoprotein A0"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0006954 "inflammatory response" evidence=ISO]
[GO:0017091 "AU-rich element binding" evidence=ISO] [GO:0019901
"protein kinase binding" evidence=ISO] [GO:0032496 "response to
lipopolysaccharide" evidence=ISO] [GO:0070935 "3'-UTR-mediated mRNA
stabilization" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
REFSEQ:XM_003752953 Ncbi:XP_003753001
Length = 226
Score = 135 (52.6 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 36/87 (41%), Positives = 48/87 (55%)
Query: 549 KIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQS-VSRGFGFVTFKHEKSAAA 607
K+FVGGL + L +F + FG +E A + +KQS RGFGFV F+ +A
Sbjct: 18 KLFVGGLKGDVAEGDLIEHFSQ-FGAVEKAEII---ADKQSGKKRGFGFVYFQSHDAADK 73
Query: 608 AVQARFVTIMGKEVEIKSAVPKEVLFA 634
A +F I G VE+K AVPKE + A
Sbjct: 74 AAVVKFHPIQGHRVEVKKAVPKEDIHA 100
>UNIPROTKB|Q13151 [details] [associations]
symbol:HNRNPA0 "Heterogeneous nuclear ribonucleoprotein A0"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IPI] [GO:0017091
"AU-rich element binding" evidence=IDA] [GO:0070935
"3'-UTR-mediated mRNA stabilization" evidence=ISS;TAS] [GO:0006954
"inflammatory response" evidence=ISS] [GO:0032496 "response to
lipopolysaccharide" evidence=ISS] [GO:0003723 "RNA binding"
evidence=TAS] [GO:0006397 "mRNA processing" evidence=TAS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] Reactome:REACT_71 InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0005654 EMBL:CH471062 GO:GO:0000166 GO:GO:0032496
GO:GO:0006954 Reactome:REACT_1675 Gene3D:3.30.70.330 GO:GO:0017091
GO:GO:0030529 GO:GO:0000398 eggNOG:COG0724 GO:GO:0070935
HOVERGEN:HBG002295 HOGENOM:HOG000234442 EMBL:U23803 EMBL:CR456986
EMBL:BC001008 EMBL:BC007271 EMBL:BC009284 EMBL:BC011972
EMBL:BC012980 EMBL:BC018949 EMBL:BC019271 EMBL:BC028976
EMBL:BC030249 IPI:IPI00011913 RefSeq:NP_006796.1 UniGene:Hs.645902
UniGene:Hs.96996 ProteinModelPortal:Q13151 SMR:Q13151 IntAct:Q13151
MINT:MINT-5001237 STRING:Q13151 PhosphoSite:Q13151 DMDM:8134660
REPRODUCTION-2DPAGE:Q13151 SWISS-2DPAGE:Q13151 PaxDb:Q13151
PeptideAtlas:Q13151 PRIDE:Q13151 DNASU:10949
Ensembl:ENST00000314940 GeneID:10949 KEGG:hsa:10949 UCSC:uc003lbt.3
CTD:10949 GeneCards:GC05M137114 HGNC:HGNC:5030 HPA:HPA036569
MIM:609409 neXtProt:NX_Q13151 PharmGKB:PA162391106
InParanoid:Q13151 KO:K12894 OMA:GPMKQNL OrthoDB:EOG4W6NX4
PhylomeDB:Q13151 GenomeRNAi:10949 NextBio:41601 Bgee:Q13151
CleanEx:HS_HNRNPA0 Genevestigator:Q13151 GermOnline:ENSG00000177733
Uniprot:Q13151
Length = 305
Score = 139 (54.0 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 52/193 (26%), Positives = 85/193 (44%)
Query: 448 LKAANTCHTNLAFLNQEKQNASLESDEDISGTCEALLSMVDDNSNTERICSG----TKIE 503
++ + C + LN + + L + GT + +V+ + R C G + +E
Sbjct: 1 MENSQLCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSR-CFGFVTYSNVE 59
Query: 504 VCKYYESHSG-CIRGSKCFYALGEEQHRKMNPGMCMIHASTQEFKSKIFVGGLPFFLDSD 562
+ S + G+ + PG HA + K+FVGGL +
Sbjct: 60 EADAAMAASPHAVDGNTVELKRAVSREDSARPGA---HAKVK----KLFVGGLKGDVAEG 112
Query: 563 SLGGYFEKHFGPIEDARVAEFQTEKQS-VSRGFGFVTFKHEKSAAAAVQARFVTIMGKEV 621
L +F + FG +E A + +KQS RGFGFV F++ +A A +F I G V
Sbjct: 113 DLIEHFSQ-FGTVEKAEII---ADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRV 168
Query: 622 EIKSAVPKEVLFA 634
E+K AVPKE +++
Sbjct: 169 EVKKAVPKEDIYS 181
>FB|FBgn0016920 [details] [associations]
symbol:nompC "no mechanoreceptor potential C" species:7227
"Drosophila melanogaster" [GO:0005262 "calcium channel activity"
evidence=IEA;ISS] [GO:0006816 "calcium ion transport" evidence=ISS]
[GO:0007638 "mechanosensory behavior" evidence=IMP] [GO:0005216
"ion channel activity" evidence=ISS] [GO:0008381
"mechanically-gated ion channel activity" evidence=NAS;TAS]
[GO:0050954 "sensory perception of mechanical stimulus"
evidence=NAS] [GO:0007605 "sensory perception of sound"
evidence=IMP] [GO:0008092 "cytoskeletal protein binding"
evidence=ISS] [GO:0030506 "ankyrin binding" evidence=NAS]
[GO:0050974 "detection of mechanical stimulus involved in sensory
perception" evidence=TAS] [GO:0070588 "calcium ion transmembrane
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005929 "cilium" evidence=IDA] [GO:0040011 "locomotion"
evidence=IMP] [GO:0050975 "sensory perception of touch"
evidence=IMP] InterPro:IPR002110 InterPro:IPR002153
InterPro:IPR005821 Pfam:PF00023 Pfam:PF00520 PRINTS:PR01097
PRINTS:PR01415 PROSITE:PS50088 SMART:SM00248 GO:GO:0016021
EMBL:AE014134 eggNOG:COG0666 GO:GO:0005262 GO:GO:0005929
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0040011 GO:GO:0007605
GeneTree:ENSGT00700000104010 GO:GO:0050974 GO:GO:0030506
GO:GO:0007638 GO:GO:0008381 RefSeq:NP_001097089.2 UniGene:Dm.3306
ProteinModelPortal:A8DYV6 SMR:A8DYV6 STRING:A8DYV6
EnsemblMetazoa:FBtr0300012 GeneID:33768 KEGG:dme:Dmel_CG11020
CTD:33768 FlyBase:FBgn0016920 OrthoDB:EOG4VMCW5 GenomeRNAi:33768
NextBio:785156 Bgee:A8DYV6 Uniprot:A8DYV6
Length = 1726
Score = 140 (54.3 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 44/168 (26%), Positives = 79/168 (47%)
Query: 291 PLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKTSMGLSQHILQNRIVGI 350
PL++A G +++ LL + G SALH A + H+
Sbjct: 663 PLLIACHRGHMELVNNLLANHARVDVFDTE---GRSALHLAAERGY---LHVCD-----A 711
Query: 351 LLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLKTIMMETPLFFAVKND 410
LL + A ++ ++++G TALH+AA +G + ++ LI+ I++ T+ +TPL A +
Sbjct: 712 LLTNKAFINSKSRVGRTALHLAAMNGFTHLVKFLIKDHNAVIDILTLRKQTPLHLAAASG 771
Query: 411 HMVCAEVLLRWGANSEVLNLRRERPIDFAKSQDMRFLLKAANTCHTNL 458
M ++LL GAN + + ++PI A + + K H +L
Sbjct: 772 QMEVCQLLLELGANIDATDDLGQKPIHVAAQNNYSEVAKLFLQQHPSL 819
Score = 122 (48.0 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 43/135 (31%), Positives = 65/135 (48%)
Query: 291 PLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKTSMGLSQHILQNRIVGI 350
PL LA +G+E+V+ +LL S G + LH A H+ +VG+
Sbjct: 978 PLHLAAFSGNENVVRLLLNS-AGVQVDAATIENGYNPLHLAC-----FGGHM---SVVGL 1028
Query: 351 LLKHGA-IVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLKTIMMETPLFFAVKN 409
LL A ++ Q++ G T LHIAA G+ Q +E L+ + + IN TPL A K
Sbjct: 1029 LLSRSAELLQSQDRNGRTGLHIAAMHGHIQMVEILLGQGAE-INATDRNGWTPLHCAAKA 1087
Query: 410 DHMVCAEVLLRWGAN 424
H+ ++L GA+
Sbjct: 1088 GHLEVVKLLCEAGAS 1102
Score = 64 (27.6 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 25/91 (27%), Positives = 39/91 (42%)
Query: 76 LVNGDLGPVALVNEVEESSGMTALHLAAESHTARCVELLLKKRARTDIRSKDGXXXXXXX 135
LVN L A V +V ++ G +ALHLAAE + LL +A + +S+ G
Sbjct: 675 LVNNLLANHARV-DVFDTEGRSALHLAAERGYLHVCDALLTNKAFINSKSRVGRTALHLA 733
Query: 136 XXXXXXXMDVIWNPDEYSVEDLVVILGQKNL 166
+ D +V D++ + Q L
Sbjct: 734 AMNGFTHLVKFLIKDHNAVIDILTLRKQTPL 764
Score = 63 (27.2 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 90 VEESSGMTALHLAAESHTARCVELLLKK-RARTDIRSKDG 128
+ ++ T +HLAAE+ A +E+L K +A R+KDG
Sbjct: 329 IADNQDRTPMHLAAENGHAHVIEILADKFKASIFERTKDG 368
Score = 59 (25.8 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 12/34 (35%), Positives = 19/34 (55%)
Query: 95 GMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
G T +H+A+ + A C +L KK + +KDG
Sbjct: 368 GSTLMHIASLNGHAECATMLFKKGVYLHMPNKDG 401
Score = 52 (23.4 bits), Expect = 5.4e-05, Sum P(2) = 5.4e-05
Identities = 14/36 (38%), Positives = 18/36 (50%)
Query: 89 EVEESSGMTALHLAAESHTARCVELLLKKRARTDIR 124
+V + TALH+A ES VE LL A +R
Sbjct: 428 DVTTNDNYTALHIAVESAKPAVVETLLGFGADVHVR 463
Score = 52 (23.4 bits), Expect = 5.4e-05, Sum P(2) = 5.4e-05
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 93 SSGMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
++G TALHLAA V +L+ D ++ +G
Sbjct: 266 ANGDTALHLAARRRDVDMVRILVDYGTNVDTQNGEG 301
Score = 51 (23.0 bits), Expect = 6.9e-05, Sum P(2) = 6.9e-05
Identities = 19/77 (24%), Positives = 34/77 (44%)
Query: 52 QQTAIVTKLLRVSCIFDSVSCATSLVNGDLGPVALVNEVEESSGMTALHLAAE-SHTARC 110
++T + L+ ++ + CAT L V L + G ++H AA HT
Sbjct: 363 ERTKDGSTLMHIASLNGHAECATMLFKKG---VYL--HMPNKDGARSIHTAAAYGHTG-I 416
Query: 111 VELLLKKRARTDIRSKD 127
+ LL+K + D+ + D
Sbjct: 417 INTLLQKGEKVDVTTND 433
Score = 47 (21.6 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 12/32 (37%), Positives = 17/32 (53%)
Query: 97 TALHLAAESHTA-RCVELLLKKRARTDIRSKD 127
T LH+AA RC +LLK A ++ + D
Sbjct: 470 TPLHIAARVKDGDRCALMLLKSGASPNLTTDD 501
Score = 46 (21.3 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 15/39 (38%), Positives = 18/39 (46%)
Query: 93 SSGMTALHLAAESHTARCVELL--LKKRARTDIRSK-DG 128
S TA+HL + T +L L A DIR K DG
Sbjct: 193 SRSQTAVHLVSSRQTGTATNILRALLAAAGKDIRLKADG 231
Score = 41 (19.5 bits), Expect = 0.00072, Sum P(2) = 0.00072
Identities = 12/50 (24%), Positives = 28/50 (56%)
Query: 78 NGDLGPVALVNEVEESSGMTALHLAAESHTARCVELLLKKRARTDIRSKD 127
+G+ P+A V+++ ++GMT L A + + ++ +++ A R+ D
Sbjct: 112 DGNHIPLAGVHDM--NTGMTPLMYATKDNKTAIMDRMIELGADVGARNND 159
>CGD|CAL0003460 [details] [associations]
symbol:orf19.5989 species:5476 "Candida albicans" [GO:0010494
"cytoplasmic stress granule" evidence=IEA] [GO:0005849 "mRNA
cleavage factor complex" evidence=IEA] [GO:0006379 "mRNA cleavage"
evidence=IEA] [GO:0006378 "mRNA polyadenylation" evidence=IEA]
[GO:0003729 "mRNA binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
CGD:CAL0003460 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
EMBL:AACQ01000003 EMBL:AACQ01000004 eggNOG:COG0724 KO:K14411
RefSeq:XP_723052.1 RefSeq:XP_723199.1 ProteinModelPortal:Q5ANB5
SMR:Q5ANB5 STRING:Q5ANB5 GeneID:3635162 GeneID:3635323
KEGG:cal:CaO19.13410 KEGG:cal:CaO19.5989 Uniprot:Q5ANB5
Length = 475
Score = 142 (55.0 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 38/123 (30%), Positives = 63/123 (51%)
Query: 539 IHASTQEFKSKIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSV-SRGFGFV 597
I QE KIFVGG+ + + +F + FG I D ++ +K + SRGFGFV
Sbjct: 237 ISKEDQEKVGKIFVGGIDPMVTEEEFDNFFSQ-FGKIIDCQL---MIDKDTGRSRGFGFV 292
Query: 598 TFKHEKSAAAAVQARFVTIMGKEVEIKSAVPKEVLFAE-LQKQSAQQQESKHEHQARLGA 656
T+ + +++T+ GK +E+K A P+ + + +Q QQQ+ + + QA+ A
Sbjct: 293 TYDSPAAVDKVCVNKYLTLKGKAMEVKRAAPRGQHNQQVMMQQQQQQQQQQAQQQAQQQA 352
Query: 657 KIP 659
P
Sbjct: 353 MYP 355
>ZFIN|ZDB-GENE-061027-46 [details] [associations]
symbol:gabpb1 "GA binding protein transcription
factor, beta subunit 1" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR002110 PRINTS:PR01415
PROSITE:PS50088 SMART:SM00248 ZFIN:ZDB-GENE-061027-46
eggNOG:COG0666 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 CTD:2553 HOGENOM:HOG000231772
HOVERGEN:HBG051686 KO:K09454 OrthoDB:EOG4MCX0P EMBL:BC124537
IPI:IPI00513504 RefSeq:NP_001070918.1 UniGene:Dr.84018
ProteinModelPortal:Q05AI6 SMR:Q05AI6 GeneID:768285 KEGG:dre:768285
InParanoid:Q05AI6 NextBio:20918549 Uniprot:Q05AI6
Length = 363
Score = 140 (54.3 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 48/175 (27%), Positives = 83/175 (47%)
Query: 288 VGPPLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKTSMGLSQHILQNRI 347
+G L+ A +AG +D + IL+ + G S LH L G H +
Sbjct: 6 LGKKLLEAARAGQDDEVRILMAN----GAPFTTDWLGTSPLH--LSAQFG---HYSTTEV 56
Query: 348 VGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLKTIMMETPLFFAV 407
LL+ G + K+ T LH+AA G+ + +E L++ D +N K ++ + L +AV
Sbjct: 57 ---LLRAGVSRDARTKVDRTPLHMAASEGHLRIVELLLKHGAD-VNAKDMLQMSALHWAV 112
Query: 408 KNDHMVCAEVLLRWGANSEVLNLRRERPIDFA---KSQDMRFLLKAA--NTCHTN 457
++ H E+LLR+GA+ L+ + +D A ++ +L+ A N +TN
Sbjct: 113 EHTHTAVVELLLRYGADVHALSKFCKNALDIALDNSCHELAHILQVAMQNQINTN 167
>UNIPROTKB|E2R771 [details] [associations]
symbol:RBM3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00700000104309 CTD:5935 KO:K13186 OMA:SDAMRAM
EMBL:AAEX03026334 RefSeq:XP_863171.1 ProteinModelPortal:E2R771
Ensembl:ENSCAFT00000024556 GeneID:609457 KEGG:cfa:609457
Uniprot:E2R771
Length = 162
Score = 119 (46.9 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 30/81 (37%), Positives = 48/81 (59%)
Query: 547 KSKIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKHEKSAA 606
+ K+FVGGL F D +L +F + FGPI + V + E Q SRGFGF+TF + A+
Sbjct: 5 EGKLFVGGLNFNTDEQALEDHF-RSFGPISEVVVVK-DRETQR-SRGFGFITFTDPEHAS 61
Query: 607 AAVQA-RFVTIMGKEVEIKSA 626
A++A ++ G+++ + A
Sbjct: 62 DAMRAMNGESLDGRQIRVDHA 82
>UNIPROTKB|F1NA51 [details] [associations]
symbol:ANK3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000281 "cytokinesis after mitosis" evidence=IEA]
[GO:0005200 "structural constituent of cytoskeleton" evidence=IEA]
[GO:0005923 "tight junction" evidence=IEA] [GO:0007411 "axon
guidance" evidence=IEA] [GO:0009925 "basal plasma membrane"
evidence=IEA] [GO:0014704 "intercalated disc" evidence=IEA]
[GO:0016328 "lateral plasma membrane" evidence=IEA] [GO:0019228
"regulation of action potential in neuron" evidence=IEA]
[GO:0033268 "node of Ranvier" evidence=IEA] [GO:0042383
"sarcolemma" evidence=IEA] [GO:0043001 "Golgi to plasma membrane
protein transport" evidence=IEA] [GO:0043194 "axon initial segment"
evidence=IEA] [GO:0045202 "synapse" evidence=IEA] [GO:0050808
"synapse organization" evidence=IEA] [GO:0071709 "membrane
assembly" evidence=IEA] [GO:0072660 "maintenance of protein
location in plasma membrane" evidence=IEA] [GO:0072661 "protein
targeting to plasma membrane" evidence=IEA] InterPro:IPR002110
Pfam:PF00023 PRINTS:PR01415 PROSITE:PS50088 SMART:SM00248
GO:GO:0005200 GO:GO:0030424 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0050808
GO:GO:0045202 GO:GO:0042383 GO:GO:0005923 GO:GO:0000281
GO:GO:0016328 GO:GO:0072661 InterPro:IPR000906 Pfam:PF00791
SMART:SM00218 PROSITE:PS51145 GeneTree:ENSGT00700000104348
GO:GO:0043001 GO:GO:0072660 GO:GO:0071709 GO:GO:0009925
EMBL:AADN02035197 EMBL:AADN02035198 EMBL:AADN02035199
IPI:IPI00582908 Ensembl:ENSGALT00000004956 ArrayExpress:F1NA51
Uniprot:F1NA51
Length = 2890
Score = 138 (53.6 bits), Expect = 5.4e-05, Sum P(3) = 5.4e-05
Identities = 83/354 (23%), Positives = 135/354 (38%)
Query: 95 GMTALHLAAESHTARCVELLLKKRARTDIRSKDGXXXXXXXXXXXXXXMDVIWNPDEYSV 154
G TALH+A+ + A V++L+ RA + +S++G + V + D +
Sbjct: 107 GNTALHIASLAGQAEVVKVLVTNRANVNAQSQNGFTPLYMAAQENHLEV-VKFLLDNGAS 165
Query: 155 EDLVVILGQKNLTTVKLLSQKTKELDEVAYANXXXXXXXXXXXXXXXXXDKVNESILVL- 213
+ L G L L Q ++ + N D + L+L
Sbjct: 166 QSLATEDGFTPLAVA--LQQGHDQVVSLLLENDTKGKVRLPALHIAARKDDTKAAALLLQ 223
Query: 214 --HDSDLGAKEKTTI------YECVIREALALGRATKLQRAVKRNSTPTTSQSAEKRKXX 265
H++D+ +K T Y + L L R + + + TP A KR
Sbjct: 224 NDHNADVESKSGFTPLHIAAHYGNINVATLLLNRGAAVDFTARNDITPL--HVASKRGNA 281
Query: 266 XXXXXXXXXFGAVANGSCTDKKVGPPLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGN 325
GA + D PL ++G E V+E+LL G
Sbjct: 282 NMVKLLLDR-GAKIDAKTRDGLT--PLHCGARSGHEQVVEMLLDR---GAPILSKTKNGL 335
Query: 326 SALHCALKTSMGLSQHILQNRIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLI 385
S LH A + H+ V +L++H V LTALH+AA G+ + + L+
Sbjct: 336 SPLHMATQ-----GDHL---NCVQLLIQHNVPVDDVTNDYLTALHVAAHCGHYKVAKVLL 387
Query: 386 RKEPDCINLKTIMMETPLFFAVKNDHMVCAEVLLRWGANSEVLNLRRERPIDFA 439
K+ + N K + TPL A K + + E+LL+ GA+ + + PI A
Sbjct: 388 DKKANP-NAKALNGFTPLHIACKKNRIKVMELLLKHGASIQAVTESGLTPIHVA 440
Score = 128 (50.1 bits), Expect = 4.7e-06, Sum P(3) = 4.7e-06
Identities = 49/166 (29%), Positives = 73/166 (43%)
Query: 275 FGAVANGSCTDKKVGPPLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKT 334
+GA AN + T + + P + LA+Q G D++ +LL G + LH A
Sbjct: 653 YGADAN-AVTRQGIAP-VHLASQDGHVDMVSLLLTRNANVNLSNKS---GLTPLHLA--- 704
Query: 335 SMGLSQHILQNRIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINL 394
+Q N + +L+ GA V Q K+G T LH+ GN + + L++ IN
Sbjct: 705 ----AQEDRVN-VAEVLVNQGAAVDAQTKMGYTPLHVGCHYGNIKIVNFLLQHSAK-INA 758
Query: 395 KTIMMETPLFFAVKNDHMVCAEVLLRWGANSEVLNLRRERPIDFAK 440
KT TPL A + H VLL+ GA L + + AK
Sbjct: 759 KTKNGYTPLHQAAQQGHTHIINVLLQHGAAPNELTVNGNTALAIAK 804
Score = 121 (47.7 bits), Expect = 2.4e-05, Sum P(3) = 2.4e-05
Identities = 56/212 (26%), Positives = 86/212 (40%)
Query: 276 GAVANGSCTDKKVGPPLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKTS 335
GA N + T PL L+ + G EDV +LL+ G + LH A K
Sbjct: 522 GASPNAATTSGYT--PLHLSAREGHEDVASVLLEH---GASLAIITKKGFTPLHVAAKYG 576
Query: 336 MGLSQHILQNRIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLK 395
+ + +LL+ A K GLT LH+AA N Q + L+ + +
Sbjct: 577 --------KIEVANLLLQKNASPDASGKSGLTPLHVAAHYDN-QKVALLLLDQGASPHAS 627
Query: 396 TIMMETPLFFAVKNDHMVCAEVLLRWGANSEVLNLRRERPIDFAKSQDMRF-LLKAANTC 454
TPL A K + M A LL +GA++ + + P+ A SQD ++ T
Sbjct: 628 AKNGYTPLHIAAKKNQMDIATTLLEYGADANAVTRQGIAPVHLA-SQDGHVDMVSLLLTR 686
Query: 455 HTNLAFLNQEKQNA-SLESDEDISGTCEALLS 485
+ N+ N+ L + ED E L++
Sbjct: 687 NANVNLSNKSGLTPLHLAAQEDRVNVAEVLVN 718
Score = 110 (43.8 bits), Expect = 0.00032, Sum P(3) = 0.00032
Identities = 56/246 (22%), Positives = 98/246 (39%)
Query: 205 KVNESILVLHDSDLGAKEKTTIYECVIREALALGRATKLQRAVKRNSTP-TTSQSAEKRK 263
KV E +L+ H + + A ++ + I A +G + + + ++P TT+ E
Sbjct: 414 KVME-LLLKHGASIQAVTESGLTP--IHVAAFMGHVNIVSQLMHHGASPNTTNVRGETAL 470
Query: 264 XXXXXXXXXXXFG-AVANGSCTDKKVGP---PLILATQAGDEDVIEILLKSKXXXXXXXX 319
V NG+ + K PL ++ + G D+++ LL+
Sbjct: 471 HMAARAGQTEVVRYLVQNGAQVEAKAKDDQTPLHISARLGKADIVQQLLQQ---GASPNA 527
Query: 320 XXXXGNSALHCALKTSMGLSQHILQNRIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQ 379
G + LH + + H + +LL+HGA ++ K G T LH+AA G +
Sbjct: 528 ATTSGYTPLHLSAREG-----H---EDVASVLLEHGASLAIITKKGFTPLHVAAKYGKIE 579
Query: 380 ALEDLIRKE--PDCINLKTIMMETPLFFAVKNDHMVCAEVLLRWGANSEVLNLRRERPID 437
L++K PD + TPL A D+ A +LL GA+ P+
Sbjct: 580 VANLLLQKNASPDASGKSGL---TPLHVAAHYDNQKVALLLLDQGASPHASAKNGYTPLH 636
Query: 438 FAKSQD 443
A ++
Sbjct: 637 IAAKKN 642
Score = 80 (33.2 bits), Expect = 4.7e-06, Sum P(3) = 4.7e-06
Identities = 30/119 (25%), Positives = 57/119 (47%)
Query: 22 IINSLLEDDKKQLINVSKRHFIDNSLD------------NADQQTAIVTKLLRVSCIFDS 69
+++ LLE+D K + + H D NAD ++ L ++ + +
Sbjct: 188 VVSLLLENDTKGKVRLPALHIAARKDDTKAAALLLQNDHNADVESKSGFTPLHIAAHYGN 247
Query: 70 VSCATSLVNGDLGPVALVNEVEESSGMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
++ AT L+N A V+ + +T LH+A++ A V+LLL + A+ D +++DG
Sbjct: 248 INVATLLLNRG----AAVDFTARND-ITPLHVASKRGNANMVKLLLDRGAKIDAKTRDG 301
Score = 64 (27.6 bits), Expect = 0.00018, Sum P(3) = 0.00018
Identities = 31/124 (25%), Positives = 49/124 (39%)
Query: 55 AIVTKL----LRVSCIFDSVSCATSLVNGDLGPVALVNEVEESSGMTALHLAAESHTARC 110
AI+TK L V+ + + A L+ + P + SG+T LH+AA +
Sbjct: 559 AIITKKGFTPLHVAAKYGKIEVANLLLQKNASP-----DASGKSGLTPLHVAAHYDNQKV 613
Query: 111 VELLLKKRARTDIRSKDGXXXXXXXXXXXXXXMDVIWNPDEYSVEDLVVILGQKNLTTVK 170
LLL + A +K+G MD+ EY + V ++ + V
Sbjct: 614 ALLLLDQGASPHASAKNGYTPLHIAAKKNQ--MDIATTLLEYGADANAVT--RQGIAPVH 669
Query: 171 LLSQ 174
L SQ
Sbjct: 670 LASQ 673
Score = 59 (25.8 bits), Expect = 5.4e-05, Sum P(3) = 5.4e-05
Identities = 12/39 (30%), Positives = 21/39 (53%)
Query: 90 VEESSGMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
+ +G+ ALHLA++ V L+++ A D +K G
Sbjct: 69 ISNQNGLNALHLASKEGHVEVVSELIQRGASVDAATKKG 107
Score = 59 (25.8 bits), Expect = 0.00056, Sum P(3) = 0.00056
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 95 GMTALHLAAESHTARCVELLLKKRARTDIRSKD 127
G TALH+AA + V L++ A+ + ++KD
Sbjct: 466 GETALHMAARAGQTEVVRYLVQNGAQVEAKAKD 498
Score = 57 (25.1 bits), Expect = 0.00088, Sum P(3) = 0.00088
Identities = 14/44 (31%), Positives = 24/44 (54%)
Query: 85 ALVNEVEESSGMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
A VN + +G T L++AA+ + V+ LL A + ++DG
Sbjct: 131 ANVN-AQSQNGFTPLYMAAQENHLEVVKFLLDNGASQSLATEDG 173
Score = 50 (22.7 bits), Expect = 4.7e-06, Sum P(3) = 4.7e-06
Identities = 26/96 (27%), Positives = 39/96 (40%)
Query: 777 SLGYSKLSDFLRTLPDLCHVKAGPIGK-NGSPNHMVLVPSPPKQKWGALQLSKNGNPSSP 835
SL K +L T P + AG + ++ + P Q W ++ G S
Sbjct: 1462 SLALRKRYSYL-TEPGMIERSAGATRSLPATYSYKPFFSTRPYQSWTTAPITVPGQTKSG 1520
Query: 836 VNSASDSNECDRNDSKSPQDLRSV-SISSTIERKPT 870
S S S+ + SP L+S+ S+SST K T
Sbjct: 1521 FTSLSSSSS--NTPTASP--LKSIWSVSSTSPIKST 1552
Score = 42 (19.8 bits), Expect = 2.9e-05, Sum P(3) = 2.9e-05
Identities = 22/91 (24%), Positives = 37/91 (40%)
Query: 778 LGYSKLSDFLRTLPD--LCHVKAGPIGKNGSPNHM--VLVPSPPK-QKWGALQLSKNGNP 832
LGY + D L+ + + + + K P M VL S + +K A ++ +
Sbjct: 806 LGYISVVDTLKVVTEETMTTITVTEKHKMNVPETMNEVLDMSDDEVRKANAPEILSDAEY 865
Query: 833 SSPVNSASDSNECDRNDSKSPQDLRSVSISS 863
S V D+ D + PQDL+ + S
Sbjct: 866 LSDVEEGEDAMTGDTDKYLGPQDLKELGDDS 896
Score = 41 (19.5 bits), Expect = 3.7e-05, Sum P(3) = 3.7e-05
Identities = 12/41 (29%), Positives = 21/41 (51%)
Query: 629 KEVLFAELQKQSAQQQESKHEHQARLGAKIP--DERTMEQI 667
K +L +L + +ES +H L A+I D+R E++
Sbjct: 2462 KMLLSEKLDVSQSDTEESVTDHALPLSAEIQGSDKRCREKV 2502
Score = 37 (18.1 bits), Expect = 9.2e-05, Sum P(3) = 9.2e-05
Identities = 22/92 (23%), Positives = 39/92 (42%)
Query: 571 HFGPIEDARVAEFQTEKQSVSRGFGFVTFKHEKSAAAAVQARFVTIMGKEVEIKSAVP-K 629
H PI + E +TE V R + + + + A + A E+E K A K
Sbjct: 2153 HDVPIPPV-ITETRTEVVHVIRSYEPSSEEIPEQKAEELPAAKPAPAFMELEQKPAGSIK 2211
Query: 630 EVLFAELQKQSAQQQESKHEHQARLGAKIPDE 661
E + A Q +++ +E H+ G ++ +E
Sbjct: 2212 EKVKA-FQMKASSSEEDDHKCVLSKGVRVKEE 2242
>UNIPROTKB|F1NCI5 [details] [associations]
symbol:HNRNPA0 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006954 "inflammatory
response" evidence=IEA] [GO:0017091 "AU-rich element binding"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0032496 "response to lipopolysaccharide" evidence=IEA]
[GO:0070935 "3'-UTR-mediated mRNA stabilization" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005634 GO:GO:0000166 GO:GO:0006954
Gene3D:3.30.70.330 GO:GO:0017091 GO:GO:0070935
GeneTree:ENSGT00700000104255 OMA:EDNQHAL EMBL:AADN02028465
IPI:IPI00573116 Ensembl:ENSGALT00000009947 Uniprot:F1NCI5
Length = 328
Score = 145 (56.1 bits), Expect = 4.9e-06, Sum P(2) = 4.9e-06
Identities = 36/83 (43%), Positives = 48/83 (57%)
Query: 549 KIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQS-VSRGFGFVTFKHEKSAAA 607
K+FVGGL + L +F + FGP+E A + +KQS RGFGFV F++ +A
Sbjct: 120 KLFVGGLKGDVGEGDLVQHFSQ-FGPVEKAEII---ADKQSGKKRGFGFVYFQNHDAADK 175
Query: 608 AVQARFVTIMGKEVEIKSAVPKE 630
A +F I G VE+K AVPKE
Sbjct: 176 AAVVKFHPIQGHRVEVKKAVPKE 198
Score = 37 (18.1 bits), Expect = 4.9e-06, Sum P(2) = 4.9e-06
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 238 GRATKLQRAVKRNSTPTTSQSAEKRK 263
G + +L+RAV R + A+ +K
Sbjct: 95 GNSVELKRAVSREDSAKPGAHAKVKK 120
>UNIPROTKB|F1LM82 [details] [associations]
symbol:Hnrnpa2b1 "Heterogeneous nuclear ribonucleoproteins
A2/B1" species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 RGD:1310403 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR021662 Pfam:PF11627
GeneTree:ENSGT00700000104376 IPI:IPI00923129
Ensembl:ENSRNOT00000015325 ArrayExpress:F1LM82 Uniprot:F1LM82
Length = 312
Score = 138 (53.6 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 36/87 (41%), Positives = 51/87 (58%)
Query: 544 QEFKSKIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKHEK 603
++F+ K+F+GGL F +SL Y+E+ +G + D V K+S RGFGFVTF
Sbjct: 17 EQFR-KLFIGGLSFETTEESLRNYYEQ-WGKLTDCVVMRDPASKRS--RGFGFVTFSSMA 72
Query: 604 SAAAAVQARFVTIMGKEVEIKSAVPKE 630
AA+ AR +I G+ VE K AV +E
Sbjct: 73 EVDAAMAARPHSIDGRVVEPKRAVARE 99
>UNIPROTKB|F6RBQ9 [details] [associations]
symbol:F6RBQ9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043023 "ribosomal large subunit binding" evidence=IEA]
[GO:0035196 "production of miRNAs involved in gene silencing by
miRNA" evidence=IEA] [GO:0009409 "response to cold" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0000166 GO:GO:0006412
GO:GO:0009409 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00700000104309 GO:GO:0035196 GO:GO:0043023
OMA:SDAMRAM EMBL:DAAA02073061 IPI:IPI00691523
Ensembl:ENSBTAT00000024034 Uniprot:F6RBQ9
Length = 160
Score = 118 (46.6 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 30/81 (37%), Positives = 48/81 (59%)
Query: 547 KSKIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKHEKSAA 606
+ K+FVGGL F D +L +F FGPI + V + E Q SRGFGF+TF + + A+
Sbjct: 5 EGKLFVGGLNFNTDERALEDHFSS-FGPISEVVVVK-DRETQR-SRGFGFITFTNPEHAS 61
Query: 607 AAVQA-RFVTIMGKEVEIKSA 626
A++A ++ G+++ + A
Sbjct: 62 NAMRAMNGESLDGRQIRVDHA 82
>UNIPROTKB|F1NNX6 [details] [associations]
symbol:ANK3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007165 "signal transduction" evidence=IEA]
InterPro:IPR000488 Pfam:PF00531 InterPro:IPR002110 PRINTS:PR01415
PROSITE:PS50017 PROSITE:PS50088 SMART:SM00005 SMART:SM00248
GO:GO:0007165 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 Gene3D:1.10.533.10
InterPro:IPR011029 SUPFAM:SSF47986 InterPro:IPR000906 Pfam:PF00791
SMART:SM00218 PROSITE:PS51145 GeneTree:ENSGT00700000104348
EMBL:AADN02035197 EMBL:AADN02035198 EMBL:AADN02035199
IPI:IPI00819842 Ensembl:ENSGALT00000041034 ArrayExpress:F1NNX6
Uniprot:F1NNX6
Length = 1824
Score = 138 (53.6 bits), Expect = 6.6e-05, Sum P(3) = 6.6e-05
Identities = 83/354 (23%), Positives = 135/354 (38%)
Query: 95 GMTALHLAAESHTARCVELLLKKRARTDIRSKDGXXXXXXXXXXXXXXMDVIWNPDEYSV 154
G TALH+A+ + A V++L+ RA + +S++G + V + D +
Sbjct: 65 GNTALHIASLAGQAEVVKVLVTNRANVNAQSQNGFTPLYMAAQENHLEV-VKFLLDNGAS 123
Query: 155 EDLVVILGQKNLTTVKLLSQKTKELDEVAYANXXXXXXXXXXXXXXXXXDKVNESILVL- 213
+ L G L L Q ++ + N D + L+L
Sbjct: 124 QSLATEDGFTPLAVA--LQQGHDQVVSLLLENDTKGKVRLPALHIAARKDDTKAAALLLQ 181
Query: 214 --HDSDLGAKEKTTI------YECVIREALALGRATKLQRAVKRNSTPTTSQSAEKRKXX 265
H++D+ +K T Y + L L R + + + TP A KR
Sbjct: 182 NDHNADVESKSGFTPLHIAAHYGNINVATLLLNRGAAVDFTARNDITPL--HVASKRGNA 239
Query: 266 XXXXXXXXXFGAVANGSCTDKKVGPPLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGN 325
GA + D PL ++G E V+E+LL G
Sbjct: 240 NMVKLLLDR-GAKIDAKTRDGLT--PLHCGARSGHEQVVEMLLDR---GAPILSKTKNGL 293
Query: 326 SALHCALKTSMGLSQHILQNRIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLI 385
S LH A + H+ V +L++H V LTALH+AA G+ + + L+
Sbjct: 294 SPLHMATQ-----GDHL---NCVQLLIQHNVPVDDVTNDYLTALHVAAHCGHYKVAKVLL 345
Query: 386 RKEPDCINLKTIMMETPLFFAVKNDHMVCAEVLLRWGANSEVLNLRRERPIDFA 439
K+ + N K + TPL A K + + E+LL+ GA+ + + PI A
Sbjct: 346 DKKANP-NAKALNGFTPLHIACKKNRIKVMELLLKHGASIQAVTESGLTPIHVA 398
Score = 128 (50.1 bits), Expect = 5.8e-06, Sum P(3) = 5.8e-06
Identities = 49/166 (29%), Positives = 73/166 (43%)
Query: 275 FGAVANGSCTDKKVGPPLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKT 334
+GA AN + T + + P + LA+Q G D++ +LL G + LH A
Sbjct: 611 YGADAN-AVTRQGIAP-VHLASQDGHVDMVSLLLTRNANVNLSNKS---GLTPLHLA--- 662
Query: 335 SMGLSQHILQNRIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINL 394
+Q N + +L+ GA V Q K+G T LH+ GN + + L++ IN
Sbjct: 663 ----AQEDRVN-VAEVLVNQGAAVDAQTKMGYTPLHVGCHYGNIKIVNFLLQHSAK-INA 716
Query: 395 KTIMMETPLFFAVKNDHMVCAEVLLRWGANSEVLNLRRERPIDFAK 440
KT TPL A + H VLL+ GA L + + AK
Sbjct: 717 KTKNGYTPLHQAAQQGHTHIINVLLQHGAAPNELTVNGNTALAIAK 762
Score = 121 (47.7 bits), Expect = 3.0e-05, Sum P(3) = 3.0e-05
Identities = 56/212 (26%), Positives = 86/212 (40%)
Query: 276 GAVANGSCTDKKVGPPLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKTS 335
GA N + T PL L+ + G EDV +LL+ G + LH A K
Sbjct: 480 GASPNAATTSGYT--PLHLSAREGHEDVASVLLEH---GASLAIITKKGFTPLHVAAKYG 534
Query: 336 MGLSQHILQNRIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLK 395
+ + +LL+ A K GLT LH+AA N Q + L+ + +
Sbjct: 535 --------KIEVANLLLQKNASPDASGKSGLTPLHVAAHYDN-QKVALLLLDQGASPHAS 585
Query: 396 TIMMETPLFFAVKNDHMVCAEVLLRWGANSEVLNLRRERPIDFAKSQDMRF-LLKAANTC 454
TPL A K + M A LL +GA++ + + P+ A SQD ++ T
Sbjct: 586 AKNGYTPLHIAAKKNQMDIATTLLEYGADANAVTRQGIAPVHLA-SQDGHVDMVSLLLTR 644
Query: 455 HTNLAFLNQEKQNA-SLESDEDISGTCEALLS 485
+ N+ N+ L + ED E L++
Sbjct: 645 NANVNLSNKSGLTPLHLAAQEDRVNVAEVLVN 676
Score = 110 (43.8 bits), Expect = 0.00039, Sum P(3) = 0.00039
Identities = 56/246 (22%), Positives = 98/246 (39%)
Query: 205 KVNESILVLHDSDLGAKEKTTIYECVIREALALGRATKLQRAVKRNSTP-TTSQSAEKRK 263
KV E +L+ H + + A ++ + I A +G + + + ++P TT+ E
Sbjct: 372 KVME-LLLKHGASIQAVTESGLTP--IHVAAFMGHVNIVSQLMHHGASPNTTNVRGETAL 428
Query: 264 XXXXXXXXXXXFG-AVANGSCTDKKVGP---PLILATQAGDEDVIEILLKSKXXXXXXXX 319
V NG+ + K PL ++ + G D+++ LL+
Sbjct: 429 HMAARAGQTEVVRYLVQNGAQVEAKAKDDQTPLHISARLGKADIVQQLLQQ---GASPNA 485
Query: 320 XXXXGNSALHCALKTSMGLSQHILQNRIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQ 379
G + LH + + H + +LL+HGA ++ K G T LH+AA G +
Sbjct: 486 ATTSGYTPLHLSAREG-----H---EDVASVLLEHGASLAIITKKGFTPLHVAAKYGKIE 537
Query: 380 ALEDLIRKE--PDCINLKTIMMETPLFFAVKNDHMVCAEVLLRWGANSEVLNLRRERPID 437
L++K PD + TPL A D+ A +LL GA+ P+
Sbjct: 538 VANLLLQKNASPDASGKSGL---TPLHVAAHYDNQKVALLLLDQGASPHASAKNGYTPLH 594
Query: 438 FAKSQD 443
A ++
Sbjct: 595 IAAKKN 600
Score = 80 (33.2 bits), Expect = 5.8e-06, Sum P(3) = 5.8e-06
Identities = 30/119 (25%), Positives = 57/119 (47%)
Query: 22 IINSLLEDDKKQLINVSKRHFIDNSLD------------NADQQTAIVTKLLRVSCIFDS 69
+++ LLE+D K + + H D NAD ++ L ++ + +
Sbjct: 146 VVSLLLENDTKGKVRLPALHIAARKDDTKAAALLLQNDHNADVESKSGFTPLHIAAHYGN 205
Query: 70 VSCATSLVNGDLGPVALVNEVEESSGMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
++ AT L+N A V+ + +T LH+A++ A V+LLL + A+ D +++DG
Sbjct: 206 INVATLLLNRG----AAVDFTARND-ITPLHVASKRGNANMVKLLLDRGAKIDAKTRDG 259
Score = 64 (27.6 bits), Expect = 0.00022, Sum P(3) = 0.00022
Identities = 31/124 (25%), Positives = 49/124 (39%)
Query: 55 AIVTKL----LRVSCIFDSVSCATSLVNGDLGPVALVNEVEESSGMTALHLAAESHTARC 110
AI+TK L V+ + + A L+ + P + SG+T LH+AA +
Sbjct: 517 AIITKKGFTPLHVAAKYGKIEVANLLLQKNASP-----DASGKSGLTPLHVAAHYDNQKV 571
Query: 111 VELLLKKRARTDIRSKDGXXXXXXXXXXXXXXMDVIWNPDEYSVEDLVVILGQKNLTTVK 170
LLL + A +K+G MD+ EY + V ++ + V
Sbjct: 572 ALLLLDQGASPHASAKNGYTPLHIAAKKNQ--MDIATTLLEYGADANAVT--RQGIAPVH 627
Query: 171 LLSQ 174
L SQ
Sbjct: 628 LASQ 631
Score = 59 (25.8 bits), Expect = 6.6e-05, Sum P(3) = 6.6e-05
Identities = 12/39 (30%), Positives = 21/39 (53%)
Query: 90 VEESSGMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
+ +G+ ALHLA++ V L+++ A D +K G
Sbjct: 27 ISNQNGLNALHLASKEGHVEVVSELIQRGASVDAATKKG 65
Score = 59 (25.8 bits), Expect = 0.00068, Sum P(3) = 0.00068
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 95 GMTALHLAAESHTARCVELLLKKRARTDIRSKD 127
G TALH+AA + V L++ A+ + ++KD
Sbjct: 424 GETALHMAARAGQTEVVRYLVQNGAQVEAKAKD 456
Score = 43 (20.2 bits), Expect = 5.8e-06, Sum P(3) = 5.8e-06
Identities = 22/91 (24%), Positives = 38/91 (41%)
Query: 778 LGYSKLSDFLRTLPD--LCHVKAGPIGKNGSPNHM--VLVPSPPK-QKWGALQLSKNGNP 832
LGY + D L+ + + + + K P M VL S + +K A ++ +
Sbjct: 764 LGYISVVDTLKVVTEETMTTITVTEKHKMNVPETMNEVLDMSDDEVRKANAPEILSDAEY 823
Query: 833 SSPVNSASDSNECDRNDSKSPQDLRSVSISS 863
S V + D+ D + PQDL+ + S
Sbjct: 824 LSDVEAGEDAMTGDTDKYLGPQDLKELGDDS 854
>UNIPROTKB|Q2HJ60 [details] [associations]
symbol:HNRNPA2B1 "Heterogeneous nuclear ribonucleoproteins
A2/B1" species:9913 "Bos taurus" [GO:0030529 "ribonucleoprotein
complex" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005654 "nucleoplasm" evidence=IEA] [GO:0097157 "pre-mRNA
intronic binding" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0050658 "RNA transport"
evidence=IEA] [GO:0048025 "negative regulation of mRNA splicing,
via spliceosome" evidence=IEA] [GO:0043047 "single-stranded
telomeric DNA binding" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0008380
"RNA splicing" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0005737 GO:GO:0005654
GO:GO:0008380 GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330
GO:GO:0005681 GO:GO:0030529 GO:GO:0097157 GO:GO:0048025
eggNOG:COG0724 HOVERGEN:HBG002295 HOGENOM:HOG000234442
OrthoDB:EOG4HQDKF EMBL:BC113298 IPI:IPI00695201
RefSeq:NP_001039440.1 UniGene:Bt.48137 ProteinModelPortal:Q2HJ60
SMR:Q2HJ60 STRING:Q2HJ60 PRIDE:Q2HJ60 Ensembl:ENSBTAT00000007527
GeneID:507564 KEGG:bta:507564 CTD:3181 GeneTree:ENSGT00700000104376
KO:K13158 OMA:HYSARTS NextBio:20868121 Uniprot:Q2HJ60
Length = 341
Score = 138 (53.6 bits), Expect = 6.1e-06, P = 6.1e-06
Identities = 36/87 (41%), Positives = 51/87 (58%)
Query: 544 QEFKSKIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKHEK 603
++F+ K+F+GGL F +SL Y+E+ +G + D V K+S RGFGFVTF
Sbjct: 6 EQFR-KLFIGGLSFETTEESLRNYYEQ-WGKLTDCVVMRDPASKRS--RGFGFVTFSSMA 61
Query: 604 SAAAAVQARFVTIMGKEVEIKSAVPKE 630
AA+ AR +I G+ VE K AV +E
Sbjct: 62 EVDAAMAARPHSIDGRVVEPKRAVARE 88
>UNIPROTKB|Q9TTV2 [details] [associations]
symbol:HNRNPA2B1 "Heterogeneous nuclear ribonucleoproteins
A2/B1" species:9490 "Saguinus oedipus" [GO:0030529
"ribonucleoprotein complex" evidence=ISS] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0005737 GO:GO:0005654 GO:GO:0008380 GO:GO:0000166
GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0005681 GO:GO:0003723
GO:GO:0030529 HOVERGEN:HBG002295 HSSP:P22626 EMBL:AF192348
ProteinModelPortal:Q9TTV2 SMR:Q9TTV2 Uniprot:Q9TTV2
Length = 341
Score = 138 (53.6 bits), Expect = 6.1e-06, P = 6.1e-06
Identities = 36/87 (41%), Positives = 51/87 (58%)
Query: 544 QEFKSKIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKHEK 603
++F+ K+F+GGL F +SL Y+E+ +G + D V K+S RGFGFVTF
Sbjct: 6 EQFR-KLFIGGLSFQTTEESLRNYYEQ-WGKLTDCVVMRDPASKRS--RGFGFVTFSSMA 61
Query: 604 SAAAAVQARFVTIMGKEVEIKSAVPKE 630
AA+ AR +I G+ VE K AV +E
Sbjct: 62 EVDAAMAARPHSIDGRVVEPKRAVARE 88
>UNIPROTKB|F1P9D4 [details] [associations]
symbol:RIPK4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] InterPro:IPR002110 InterPro:IPR000719
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PRINTS:PR01415
PROSITE:PS00108 PROSITE:PS50011 PROSITE:PS50088 SMART:SM00248
GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
GeneTree:ENSGT00550000074536 OMA:DLRFRII EMBL:AAEX03016568
EMBL:AAEX03016569 Ensembl:ENSCAFT00000016214 Uniprot:F1P9D4
Length = 713
Score = 117 (46.2 bits), Expect = 6.5e-06, Sum P(2) = 6.5e-06
Identities = 38/116 (32%), Positives = 58/116 (50%)
Query: 326 SALHCALKTSMGLS-QHILQNRIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDL 384
S + C +T M ++ QH Q IV ILL+ G VS + K LH AA G+ + L
Sbjct: 460 SEVDCEGRTPMHVACQHG-QEGIVRILLRRGVDVSLRGKDAWVPLHYAAWQGHLPIVR-L 517
Query: 385 IRKEPDC-INLKTIMMETPLFFAVKNDHMVCAEVLLRWGANSEVLNLRRERPIDFA 439
+ K+P +N +T+ TPL A + H A VL+ ++ V +L + P+ A
Sbjct: 518 LAKQPGVSVNAQTLDGRTPLHLAAQRGHYRVARVLIDLRSDVNVCSLLSQTPLHVA 573
Score = 108 (43.1 bits), Expect = 5.8e-05, Sum P(2) = 5.8e-05
Identities = 42/139 (30%), Positives = 63/139 (45%)
Query: 291 PLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKTSMGLSQHILQNRIVGI 350
P+ +A Q G E ++ ILL+ LH A G H+ IV +
Sbjct: 469 PMHVACQHGQEGIVRILLRRGVDVSLRGKDAWV---PLHYA--AWQG---HL---PIVRL 517
Query: 351 LLKH-GAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLKTIMMETPLFFAVKN 409
L K G V+ Q G T LH+AA G+ + LI D +N+ +++ +TPL A +
Sbjct: 518 LAKQPGVSVNAQTLDGRTPLHLAAQRGHYRVARVLIDLRSD-VNVCSLLSQTPLHVAAET 576
Query: 410 DHMVCAEVLLRWGANSEVL 428
H A +LL GA+ E +
Sbjct: 577 GHTSTARLLLHRGADKEAV 595
Score = 103 (41.3 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 37/141 (26%), Positives = 62/141 (43%)
Query: 291 PLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKTSMGLSQHILQNRIVGI 350
PL +A + G +LL G +ALH A + H+ V +
Sbjct: 569 PLHVAAETGHTSTARLLLHR---GADKEAVTAEGYTALHLASRNG-----HLAT---VKL 617
Query: 351 LLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLKTIMMETPLFFAVKND 410
L++ A V + TALH+AA G+S+ +E+L+ D ++L + L A +
Sbjct: 618 LVEEKADVLARGPRNQTALHLAAARGHSEVVEELV--SADALDLSDEQGLSALHLAAQGK 675
Query: 411 HMVCAEVLLRWGANSEVLNLR 431
H E LL+ GA+ + +L+
Sbjct: 676 HTKTVETLLKHGAHVNLQSLK 696
Score = 76 (31.8 bits), Expect = 6.5e-06, Sum P(2) = 6.5e-06
Identities = 32/126 (25%), Positives = 52/126 (41%)
Query: 7 SYTAAPSVTDLETTLI-----INSLLEDDKKQLINVSKRHFIDNSLDNADQQTAIVTKLL 61
S+ PS DL TT I +++++ D +L+ + + +D LD LL
Sbjct: 319 SFEREPSTGDLGTTDIQKKKLVDAIVSGDTSRLMKILQPQDVDLVLDGG-------ASLL 371
Query: 62 RVSCIFDSVSCATSLVNGDLGPVALVNEVEESSGMTALHLAAESHTARCVELLLKKRART 121
++ C L+ + P L N G T LH+A E VELLL ++
Sbjct: 372 HLAVEAGQEECVKWLLLNNANP-NLTNR----KGSTPLHVAVEKRVRGVVELLLARKISV 426
Query: 122 DIRSKD 127
+ +D
Sbjct: 427 NAADED 432
Score = 60 (26.2 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 15/59 (25%), Positives = 30/59 (50%)
Query: 75 SLVNGDLGPVALVNEVEE-----SSGMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
++V+GD + + + ++ G + LHLA E+ CV+ LL A ++ ++ G
Sbjct: 342 AIVSGDTSRLMKILQPQDVDLVLDGGASLLHLAVEAGQEECVKWLLLNNANPNLTNRKG 400
>UNIPROTKB|F1LNF1 [details] [associations]
symbol:Hnrnpa2b1 "Heterogeneous nuclear ribonucleoproteins
A2/B1" species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 RGD:1310403
GO:GO:0005730 GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330
GO:GO:0003723 GO:GO:0071013 GO:GO:0050658 GO:GO:0043047
GeneTree:ENSGT00700000104376 OMA:HYSARTS IPI:IPI00867934
ProteinModelPortal:F1LNF1 Ensembl:ENSRNOT00000015152
ArrayExpress:F1LNF1 Uniprot:F1LNF1
Length = 352
Score = 138 (53.6 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 36/87 (41%), Positives = 51/87 (58%)
Query: 544 QEFKSKIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKHEK 603
++F+ K+F+GGL F +SL Y+E+ +G + D V K+S RGFGFVTF
Sbjct: 17 EQFR-KLFIGGLSFETTEESLRNYYEQ-WGKLTDCVVMRDPASKRS--RGFGFVTFSSMA 72
Query: 604 SAAAAVQARFVTIMGKEVEIKSAVPKE 630
AA+ AR +I G+ VE K AV +E
Sbjct: 73 EVDAAMAARPHSIDGRVVEPKRAVARE 99
>UNIPROTKB|F1Q1K6 [details] [associations]
symbol:HNRNPA2B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00700000104376 OMA:HYSARTS EMBL:AAEX03009384
Ensembl:ENSCAFT00000004622 Uniprot:F1Q1K6
Length = 353
Score = 138 (53.6 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 36/87 (41%), Positives = 51/87 (58%)
Query: 544 QEFKSKIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKHEK 603
++F+ K+F+GGL F +SL Y+E+ +G + D V K+S RGFGFVTF
Sbjct: 18 EQFR-KLFIGGLSFETTEESLRNYYEQ-WGKLTDCVVMRDPASKRS--RGFGFVTFSSMA 73
Query: 604 SAAAAVQARFVTIMGKEVEIKSAVPKE 630
AA+ AR +I G+ VE K AV +E
Sbjct: 74 EVDAAMAARPHSIDGRVVEPKRAVARE 100
>UNIPROTKB|P22626 [details] [associations]
symbol:HNRNPA2B1 "Heterogeneous nuclear ribonucleoproteins
A2/B1" species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0048025 "negative regulation of mRNA splicing,
via spliceosome" evidence=IEA] [GO:0097157 "pre-mRNA intronic
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0030529 "ribonucleoprotein
complex" evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;TAS] [GO:0006397 "mRNA processing" evidence=IDA]
[GO:0050658 "RNA transport" evidence=IDA] [GO:0043047
"single-stranded telomeric DNA binding" evidence=IDA] [GO:0003723
"RNA binding" evidence=IDA] [GO:0005681 "spliceosomal complex"
evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380
"RNA splicing" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] Reactome:REACT_71 InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0005737 GO:GO:0005654 GO:GO:0005730 GO:GO:0000166
Reactome:REACT_1675 Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0000398
GO:GO:0071013 GO:GO:0050658 eggNOG:COG0724 GO:GO:0043047
HOVERGEN:HBG002295 HOGENOM:HOG000234442 OrthoDB:EOG4HQDKF
HPA:HPA001666 CTD:3181 KO:K13158 OMA:HYSARTS EMBL:M29064
EMBL:M29065 EMBL:U09123 EMBL:U09120 EMBL:U09121 EMBL:U09122
EMBL:D28877 EMBL:AK289429 IPI:IPI00396378 IPI:IPI00414696
PIR:A56845 RefSeq:NP_002128.1 RefSeq:NP_112533.1 UniGene:Hs.487774
PDB:1X4B PDBsum:1X4B ProteinModelPortal:P22626 SMR:P22626
IntAct:P22626 MINT:MINT-4998934 STRING:P22626 PhosphoSite:P22626
DMDM:133257 REPRODUCTION-2DPAGE:IPI00396378
REPRODUCTION-2DPAGE:IPI00414696 REPRODUCTION-2DPAGE:P22626
SWISS-2DPAGE:P22626 UCD-2DPAGE:P22626 PaxDb:P22626 PRIDE:P22626
Ensembl:ENST00000354667 Ensembl:ENST00000356674
Ensembl:ENST00000360787 GeneID:3181 KEGG:hsa:3181 UCSC:uc003sxr.4
UCSC:uc003sxs.4 GeneCards:GC07M026229 HGNC:HGNC:5033 HPA:CAB012403
MIM:600124 neXtProt:NX_P22626 PharmGKB:PA162391140 PhylomeDB:P22626
ChiTaRS:HNRNPA2B1 EvolutionaryTrace:P22626 GenomeRNAi:3181
NextBio:12622 PMAP-CutDB:P22626 Bgee:P22626 CleanEx:HS_HNRNPA2B1
Genevestigator:P22626 GermOnline:ENSG00000122566 Uniprot:P22626
Length = 353
Score = 138 (53.6 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 36/87 (41%), Positives = 51/87 (58%)
Query: 544 QEFKSKIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKHEK 603
++F+ K+F+GGL F +SL Y+E+ +G + D V K+S RGFGFVTF
Sbjct: 18 EQFR-KLFIGGLSFETTEESLRNYYEQ-WGKLTDCVVMRDPASKRS--RGFGFVTFSSMA 73
Query: 604 SAAAAVQARFVTIMGKEVEIKSAVPKE 630
AA+ AR +I G+ VE K AV +E
Sbjct: 74 EVDAAMAARPHSIDGRVVEPKRAVARE 100
>UNIPROTKB|F1RX74 [details] [associations]
symbol:HNRNPA2B1 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0097157 "pre-mRNA intronic binding" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0050658 "RNA transport" evidence=IEA] [GO:0048025 "negative
regulation of mRNA splicing, via spliceosome" evidence=IEA]
[GO:0043047 "single-stranded telomeric DNA binding" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005730 GO:GO:0000166 GO:GO:0006397
Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0071013 GO:GO:0050658
GO:GO:0043047 GeneTree:ENSGT00700000104376 OMA:HYSARTS
EMBL:CU469303 Ensembl:ENSSSCT00000017244 Uniprot:F1RX74
Length = 353
Score = 138 (53.6 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 36/87 (41%), Positives = 51/87 (58%)
Query: 544 QEFKSKIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKHEK 603
++F+ K+F+GGL F +SL Y+E+ +G + D V K+S RGFGFVTF
Sbjct: 18 EQFR-KLFIGGLSFETTEESLRNYYEQ-WGKLTDCVVMRDPASKRS--RGFGFVTFSSMA 73
Query: 604 SAAAAVQARFVTIMGKEVEIKSAVPKE 630
AA+ AR +I G+ VE K AV +E
Sbjct: 74 EVDAAMAARPHSIDGRVVEPKRAVARE 100
>UNIPROTKB|Q5RBU8 [details] [associations]
symbol:HNRNPA2B1 "Heterogeneous nuclear ribonucleoproteins
A2/B1" species:9601 "Pongo abelii" [GO:0030529 "ribonucleoprotein
complex" evidence=ISS] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005737
GO:GO:0005654 GO:GO:0008380 GO:GO:0000166 GO:GO:0006397
Gene3D:3.30.70.330 GO:GO:0005681 GO:GO:0003723 GO:GO:0030529
HOVERGEN:HBG002295 CTD:3181 KO:K13158 EMBL:CR858535
RefSeq:NP_001127331.1 UniGene:Pab.19213 HSSP:P22626
ProteinModelPortal:Q5RBU8 SMR:Q5RBU8 PRIDE:Q5RBU8 GeneID:100174392
KEGG:pon:100174392 InParanoid:Q5RBU8 Uniprot:Q5RBU8
Length = 353
Score = 138 (53.6 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 36/87 (41%), Positives = 51/87 (58%)
Query: 544 QEFKSKIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKHEK 603
++F+ K+F+GGL F +SL Y+E+ +G + D V K+S RGFGFVTF
Sbjct: 18 EQFR-KLFIGGLSFETTEESLRNYYEQ-WGKLTDCVVMRDPASKRS--RGFGFVTFSSMA 73
Query: 604 SAAAAVQARFVTIMGKEVEIKSAVPKE 630
AA+ AR +I G+ VE K AV +E
Sbjct: 74 EVDAAMAARPHSIDGRVVEPKRAVARE 100
>MGI|MGI:104819 [details] [associations]
symbol:Hnrnpa2b1 "heterogeneous nuclear ribonucleoprotein
A2/B1" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=ISO] [GO:0005634
"nucleus" evidence=IDA] [GO:0005681 "spliceosomal complex"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006397
"mRNA processing" evidence=ISO] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=ISO]
[GO:0043047 "single-stranded telomeric DNA binding" evidence=ISO]
[GO:0048025 "negative regulation of mRNA splicing, via spliceosome"
evidence=IMP;IDA] [GO:0050658 "RNA transport" evidence=ISO]
[GO:0071013 "catalytic step 2 spliceosome" evidence=ISO]
[GO:0097157 "pre-mRNA intronic binding" evidence=IDA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 MGI:MGI:104819 GO:GO:0005737 GO:GO:0005654
GO:GO:0008380 GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330
GO:GO:0005681 GO:GO:0097157 GO:GO:0050658 GO:GO:0048025
eggNOG:COG0724 GO:GO:0043047 HOVERGEN:HBG002295 OrthoDB:EOG4HQDKF
CTD:3181 GeneTree:ENSGT00700000104376 KO:K13158 OMA:HYSARTS
ChiTaRS:HNRNPA2B1 EMBL:AF406651 EMBL:AF452567 EMBL:AF073990
EMBL:AF073993 EMBL:AK089012 EMBL:AK137214 EMBL:BC059107
EMBL:BC141253 IPI:IPI00405058 IPI:IPI00622847 IPI:IPI00828488
RefSeq:NP_058086.2 RefSeq:NP_872591.1 RefSeq:XP_001473875.2
UniGene:Mm.155896 ProteinModelPortal:O88569 SMR:O88569
IntAct:O88569 STRING:O88569 PhosphoSite:O88569
REPRODUCTION-2DPAGE:IPI00405058 REPRODUCTION-2DPAGE:O88569
SWISS-2DPAGE:O88569 PaxDb:O88569 PRIDE:O88569
Ensembl:ENSMUST00000069949 Ensembl:ENSMUST00000090002
Ensembl:ENSMUST00000114459 GeneID:100045191 GeneID:53379
KEGG:mmu:100045191 KEGG:mmu:53379 UCSC:uc009bxm.1 UCSC:uc009bxn.1
NextBio:458663 Bgee:O88569 CleanEx:MM_HNRNPA2B1
Genevestigator:O88569 GermOnline:ENSMUSG00000004980 Uniprot:O88569
Length = 353
Score = 138 (53.6 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 36/87 (41%), Positives = 51/87 (58%)
Query: 544 QEFKSKIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKHEK 603
++F+ K+F+GGL F +SL Y+E+ +G + D V K+S RGFGFVTF
Sbjct: 18 EQFR-KLFIGGLSFETTEESLRNYYEQ-WGKLTDCVVMRDPASKRS--RGFGFVTFSSMA 73
Query: 604 SAAAAVQARFVTIMGKEVEIKSAVPKE 630
AA+ AR +I G+ VE K AV +E
Sbjct: 74 EVDAAMAARPHSIDGRVVEPKRAVARE 100
>RGD|1310403 [details] [associations]
symbol:Hnrnpa2b1 "heterogeneous nuclear ribonucleoprotein A2/B1"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005654 "nucleoplasm"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA;ISO]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=ISO;ISS] [GO:0043047
"single-stranded telomeric DNA binding" evidence=IEA;ISO]
[GO:0048025 "negative regulation of mRNA splicing, via spliceosome"
evidence=IEA;ISO] [GO:0050658 "RNA transport" evidence=IEA;ISO]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA;ISO]
[GO:0097157 "pre-mRNA intronic binding" evidence=IEA;ISO]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 RGD:1310403 GO:GO:0005737 GO:GO:0005654 GO:GO:0005730
GO:GO:0008380 GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330
GO:GO:0003723 GO:GO:0030529 GO:GO:0071013 GO:GO:0050658
eggNOG:COG0724 GO:GO:0043047 HOGENOM:HOG000234442 OrthoDB:EOG4HQDKF
CTD:3181 KO:K13158 EMBL:AB006815 EMBL:AB006816 EMBL:AB006817
EMBL:AB006818 IPI:IPI00212969 IPI:IPI00867934 IPI:IPI00923129
IPI:IPI00923135 RefSeq:NP_001098083.1 UniGene:Rn.231911
ProteinModelPortal:A7VJC2 SMR:A7VJC2 STRING:A7VJC2 PRIDE:A7VJC2
GeneID:362361 KEGG:rno:362361 UCSC:RGD:1310403 HOVERGEN:HBG108415
InParanoid:A7VJC2 NextBio:679650 ArrayExpress:A7VJC2
Genevestigator:A7VJC2 Uniprot:A7VJC2
Length = 353
Score = 138 (53.6 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 36/87 (41%), Positives = 51/87 (58%)
Query: 544 QEFKSKIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKHEK 603
++F+ K+F+GGL F +SL Y+E+ +G + D V K+S RGFGFVTF
Sbjct: 18 EQFR-KLFIGGLSFETTEESLRNYYEQ-WGKLTDCVVMRDPASKRS--RGFGFVTFSSMA 73
Query: 604 SAAAAVQARFVTIMGKEVEIKSAVPKE 630
AA+ AR +I G+ VE K AV +E
Sbjct: 74 EVDAAMAARPHSIDGRVVEPKRAVARE 100
>MGI|MGI:1919638 [details] [associations]
symbol:Ripk4 "receptor-interacting serine-threonine kinase
4" species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0002009 "morphogenesis of an epithelium"
evidence=ISO] [GO:0004672 "protein kinase activity" evidence=IEA]
[GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006468 "protein phosphorylation" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016301 "kinase activity"
evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] InterPro:IPR002110 InterPro:IPR000719
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PRINTS:PR01415 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 PROSITE:PS50088 SMART:SM00248 MGI:MGI:1919638
GO:GO:0005524 GO:GO:0005634 GO:GO:0002009 GO:GO:0005737
GO:GO:0016020 eggNOG:COG0666 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 HOGENOM:HOG000294086 HOVERGEN:HBG061582
GeneTree:ENSGT00550000074536 HSSP:O43318 EMBL:AF302127
EMBL:AK145203 EMBL:BC057871 IPI:IPI00112410 RefSeq:NP_076152.2
UniGene:Mm.35290 ProteinModelPortal:Q9ERK0 SMR:Q9ERK0 IntAct:Q9ERK0
STRING:Q9ERK0 PhosphoSite:Q9ERK0 PRIDE:Q9ERK0
Ensembl:ENSMUST00000019386 GeneID:72388 KEGG:mmu:72388
UCSC:uc008adn.1 CTD:54101 InParanoid:Q9ERK0 KO:K08848 OMA:ERHASAD
OrthoDB:EOG4XD3QJ NextBio:336160 Bgee:Q9ERK0 CleanEx:MM_RIPK4
Genevestigator:Q9ERK0 Uniprot:Q9ERK0
Length = 786
Score = 114 (45.2 bits), Expect = 6.7e-06, Sum P(2) = 6.7e-06
Identities = 42/149 (28%), Positives = 66/149 (44%)
Query: 292 LILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKTSMGLSQHILQNRIVGIL 351
L A Q GDE +LL+ G + +H A QH +N IV L
Sbjct: 510 LHFAAQNGDEASTRLLLEKNASVNEVDFE---GRTPMHVAC-------QHGQEN-IVRTL 558
Query: 352 LKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDC-INLKTIMMETPLFFAVKND 410
L+ G V Q K LH AA G+ ++ L+ K+P +N +T+ TPL A +
Sbjct: 559 LRRGVDVGLQGKDAWLPLHYAAWQGHLPIVK-LLAKQPGVSVNAQTLDGRTPLHLAAQRG 617
Query: 411 HMVCAEVLLRWGANSEVLNLRRERPIDFA 439
H A +L+ ++ + +L+ + P+ A
Sbjct: 618 HYRVARILIDLCSDVNICSLQAQTPLHVA 646
Score = 111 (44.1 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 39/141 (27%), Positives = 63/141 (44%)
Query: 291 PLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKTSMGLSQHILQNRIVGI 350
PL +A + G +LL G +ALH A + H+ V +
Sbjct: 642 PLHVAAETGHTSTARLLLHR---GAGKEALTSEGYTALHLAAQNG-----HLAT---VKL 690
Query: 351 LLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLKTIMMETPLFFAVKND 410
L++ A V + L TALH+AA G+S+ +E+L+ D I+L + L A +
Sbjct: 691 LIEEKADVMARGPLNQTALHLAAARGHSEVVEELV--SADLIDLSDEQGLSALHLAAQGR 748
Query: 411 HMVCAEVLLRWGANSEVLNLR 431
H E LL+ GA+ + +L+
Sbjct: 749 HSQTVETLLKHGAHINLQSLK 769
Score = 102 (41.0 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 30/83 (36%), Positives = 42/83 (50%)
Query: 347 IVGILLKH-GAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLKTIMMETPLFF 405
IV +L K G V+ Q G T LH+AA G+ + LI D +N+ ++ +TPL
Sbjct: 587 IVKLLAKQPGVSVNAQTLDGRTPLHLAAQRGHYRVARILIDLCSD-VNICSLQAQTPLHV 645
Query: 406 AVKNDHMVCAEVLLRWGANSEVL 428
A + H A +LL GA E L
Sbjct: 646 AAETGHTSTARLLLHRGAGKEAL 668
Score = 80 (33.2 bits), Expect = 6.7e-06, Sum P(2) = 6.7e-06
Identities = 28/113 (24%), Positives = 52/113 (46%)
Query: 15 TDLETTLIINSLLEDDKKQLINVSKRHFIDNSLDNADQQTAIVTKLLRVSCIFDSVSCAT 74
TD++ ++++++ D +L+ + + +D LD++ LL ++ C
Sbjct: 405 TDIQKKKLVDAIISGDTSRLMKILQPQDVDLVLDSS-------ASLLHLAVEAGQEECVK 457
Query: 75 SLVNGDLGPVALVNEVEESSGMTALHLAAESHTARCVELLLKKRARTDIRSKD 127
L+ + P L N G T LH+A E VELLL ++ T + +KD
Sbjct: 458 WLLLNNANP-NLTNR----KGSTPLHMAVERKGRGIVELLLARK--TSVNAKD 503
>UNIPROTKB|F1NNX7 [details] [associations]
symbol:ANK3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007165 "signal transduction" evidence=IEA]
InterPro:IPR000488 Pfam:PF00531 InterPro:IPR002110 PRINTS:PR01415
PROSITE:PS50017 PROSITE:PS50088 SMART:SM00005 SMART:SM00248
GO:GO:0007165 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 Gene3D:1.10.533.10
InterPro:IPR011029 SUPFAM:SSF47986 InterPro:IPR000906 Pfam:PF00791
SMART:SM00218 PROSITE:PS51145 GeneTree:ENSGT00700000104348
OMA:YDILALE EMBL:AADN02035197 EMBL:AADN02035198 EMBL:AADN02035199
IPI:IPI00819087 Ensembl:ENSGALT00000041033 ArrayExpress:F1NNX7
Uniprot:F1NNX7
Length = 1915
Score = 138 (53.6 bits), Expect = 7.6e-05, Sum P(3) = 7.6e-05
Identities = 83/354 (23%), Positives = 135/354 (38%)
Query: 95 GMTALHLAAESHTARCVELLLKKRARTDIRSKDGXXXXXXXXXXXXXXMDVIWNPDEYSV 154
G TALH+A+ + A V++L+ RA + +S++G + V + D +
Sbjct: 65 GNTALHIASLAGQAEVVKVLVTNRANVNAQSQNGFTPLYMAAQENHLEV-VKFLLDNGAS 123
Query: 155 EDLVVILGQKNLTTVKLLSQKTKELDEVAYANXXXXXXXXXXXXXXXXXDKVNESILVL- 213
+ L G L L Q ++ + N D + L+L
Sbjct: 124 QSLATEDGFTPLAVA--LQQGHDQVVSLLLENDTKGKVRLPALHIAARKDDTKAAALLLQ 181
Query: 214 --HDSDLGAKEKTTI------YECVIREALALGRATKLQRAVKRNSTPTTSQSAEKRKXX 265
H++D+ +K T Y + L L R + + + TP A KR
Sbjct: 182 NDHNADVESKSGFTPLHIAAHYGNINVATLLLNRGAAVDFTARNDITPL--HVASKRGNA 239
Query: 266 XXXXXXXXXFGAVANGSCTDKKVGPPLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGN 325
GA + D PL ++G E V+E+LL G
Sbjct: 240 NMVKLLLDR-GAKIDAKTRDGLT--PLHCGARSGHEQVVEMLLDR---GAPILSKTKNGL 293
Query: 326 SALHCALKTSMGLSQHILQNRIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLI 385
S LH A + H+ V +L++H V LTALH+AA G+ + + L+
Sbjct: 294 SPLHMATQ-----GDHL---NCVQLLIQHNVPVDDVTNDYLTALHVAAHCGHYKVAKVLL 345
Query: 386 RKEPDCINLKTIMMETPLFFAVKNDHMVCAEVLLRWGANSEVLNLRRERPIDFA 439
K+ + N K + TPL A K + + E+LL+ GA+ + + PI A
Sbjct: 346 DKKANP-NAKALNGFTPLHIACKKNRIKVMELLLKHGASIQAVTESGLTPIHVA 398
Score = 128 (50.1 bits), Expect = 6.7e-06, Sum P(3) = 6.7e-06
Identities = 49/166 (29%), Positives = 73/166 (43%)
Query: 275 FGAVANGSCTDKKVGPPLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKT 334
+GA AN + T + + P + LA+Q G D++ +LL G + LH A
Sbjct: 611 YGADAN-AVTRQGIAP-VHLASQDGHVDMVSLLLTRNANVNLSNKS---GLTPLHLA--- 662
Query: 335 SMGLSQHILQNRIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINL 394
+Q N + +L+ GA V Q K+G T LH+ GN + + L++ IN
Sbjct: 663 ----AQEDRVN-VAEVLVNQGAAVDAQTKMGYTPLHVGCHYGNIKIVNFLLQHSAK-INA 716
Query: 395 KTIMMETPLFFAVKNDHMVCAEVLLRWGANSEVLNLRRERPIDFAK 440
KT TPL A + H VLL+ GA L + + AK
Sbjct: 717 KTKNGYTPLHQAAQQGHTHIINVLLQHGAAPNELTVNGNTALAIAK 762
Score = 121 (47.7 bits), Expect = 3.5e-05, Sum P(3) = 3.5e-05
Identities = 56/212 (26%), Positives = 86/212 (40%)
Query: 276 GAVANGSCTDKKVGPPLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKTS 335
GA N + T PL L+ + G EDV +LL+ G + LH A K
Sbjct: 480 GASPNAATTSGYT--PLHLSAREGHEDVASVLLEH---GASLAIITKKGFTPLHVAAKYG 534
Query: 336 MGLSQHILQNRIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLK 395
+ + +LL+ A K GLT LH+AA N Q + L+ + +
Sbjct: 535 --------KIEVANLLLQKNASPDASGKSGLTPLHVAAHYDN-QKVALLLLDQGASPHAS 585
Query: 396 TIMMETPLFFAVKNDHMVCAEVLLRWGANSEVLNLRRERPIDFAKSQDMRF-LLKAANTC 454
TPL A K + M A LL +GA++ + + P+ A SQD ++ T
Sbjct: 586 AKNGYTPLHIAAKKNQMDIATTLLEYGADANAVTRQGIAPVHLA-SQDGHVDMVSLLLTR 644
Query: 455 HTNLAFLNQEKQNA-SLESDEDISGTCEALLS 485
+ N+ N+ L + ED E L++
Sbjct: 645 NANVNLSNKSGLTPLHLAAQEDRVNVAEVLVN 676
Score = 110 (43.8 bits), Expect = 0.00045, Sum P(3) = 0.00045
Identities = 56/246 (22%), Positives = 98/246 (39%)
Query: 205 KVNESILVLHDSDLGAKEKTTIYECVIREALALGRATKLQRAVKRNSTP-TTSQSAEKRK 263
KV E +L+ H + + A ++ + I A +G + + + ++P TT+ E
Sbjct: 372 KVME-LLLKHGASIQAVTESGLTP--IHVAAFMGHVNIVSQLMHHGASPNTTNVRGETAL 428
Query: 264 XXXXXXXXXXXFG-AVANGSCTDKKVGP---PLILATQAGDEDVIEILLKSKXXXXXXXX 319
V NG+ + K PL ++ + G D+++ LL+
Sbjct: 429 HMAARAGQTEVVRYLVQNGAQVEAKAKDDQTPLHISARLGKADIVQQLLQQ---GASPNA 485
Query: 320 XXXXGNSALHCALKTSMGLSQHILQNRIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQ 379
G + LH + + H + +LL+HGA ++ K G T LH+AA G +
Sbjct: 486 ATTSGYTPLHLSAREG-----H---EDVASVLLEHGASLAIITKKGFTPLHVAAKYGKIE 537
Query: 380 ALEDLIRKE--PDCINLKTIMMETPLFFAVKNDHMVCAEVLLRWGANSEVLNLRRERPID 437
L++K PD + TPL A D+ A +LL GA+ P+
Sbjct: 538 VANLLLQKNASPDASGKSGL---TPLHVAAHYDNQKVALLLLDQGASPHASAKNGYTPLH 594
Query: 438 FAKSQD 443
A ++
Sbjct: 595 IAAKKN 600
Score = 80 (33.2 bits), Expect = 6.7e-06, Sum P(3) = 6.7e-06
Identities = 30/119 (25%), Positives = 57/119 (47%)
Query: 22 IINSLLEDDKKQLINVSKRHFIDNSLD------------NADQQTAIVTKLLRVSCIFDS 69
+++ LLE+D K + + H D NAD ++ L ++ + +
Sbjct: 146 VVSLLLENDTKGKVRLPALHIAARKDDTKAAALLLQNDHNADVESKSGFTPLHIAAHYGN 205
Query: 70 VSCATSLVNGDLGPVALVNEVEESSGMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
++ AT L+N A V+ + +T LH+A++ A V+LLL + A+ D +++DG
Sbjct: 206 INVATLLLNRG----AAVDFTARND-ITPLHVASKRGNANMVKLLLDRGAKIDAKTRDG 259
Score = 64 (27.6 bits), Expect = 0.00026, Sum P(3) = 0.00026
Identities = 31/124 (25%), Positives = 49/124 (39%)
Query: 55 AIVTKL----LRVSCIFDSVSCATSLVNGDLGPVALVNEVEESSGMTALHLAAESHTARC 110
AI+TK L V+ + + A L+ + P + SG+T LH+AA +
Sbjct: 517 AIITKKGFTPLHVAAKYGKIEVANLLLQKNASP-----DASGKSGLTPLHVAAHYDNQKV 571
Query: 111 VELLLKKRARTDIRSKDGXXXXXXXXXXXXXXMDVIWNPDEYSVEDLVVILGQKNLTTVK 170
LLL + A +K+G MD+ EY + V ++ + V
Sbjct: 572 ALLLLDQGASPHASAKNGYTPLHIAAKKNQ--MDIATTLLEYGADANAVT--RQGIAPVH 627
Query: 171 LLSQ 174
L SQ
Sbjct: 628 LASQ 631
Score = 59 (25.8 bits), Expect = 7.6e-05, Sum P(3) = 7.6e-05
Identities = 12/39 (30%), Positives = 21/39 (53%)
Query: 90 VEESSGMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
+ +G+ ALHLA++ V L+++ A D +K G
Sbjct: 27 ISNQNGLNALHLASKEGHVEVVSELIQRGASVDAATKKG 65
Score = 59 (25.8 bits), Expect = 0.00079, Sum P(3) = 0.00079
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 95 GMTALHLAAESHTARCVELLLKKRARTDIRSKD 127
G TALH+AA + V L++ A+ + ++KD
Sbjct: 424 GETALHMAARAGQTEVVRYLVQNGAQVEAKAKD 456
Score = 43 (20.2 bits), Expect = 6.7e-06, Sum P(3) = 6.7e-06
Identities = 22/91 (24%), Positives = 38/91 (41%)
Query: 778 LGYSKLSDFLRTLPD--LCHVKAGPIGKNGSPNHM--VLVPSPPK-QKWGALQLSKNGNP 832
LGY + D L+ + + + + K P M VL S + +K A ++ +
Sbjct: 764 LGYISVVDTLKVVTEETMTTITVTEKHKMNVPETMNEVLDMSDDEVRKANAPEILSDAEY 823
Query: 833 SSPVNSASDSNECDRNDSKSPQDLRSVSISS 863
S V + D+ D + PQDL+ + S
Sbjct: 824 LSDVEAGEDAMTGDTDKYLGPQDLKELGDDS 854
>UNIPROTKB|F8VTQ5 [details] [associations]
symbol:HNRNPA1 "Heterogeneous nuclear ribonucleoprotein A1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
EMBL:AC078778 HGNC:HGNC:5031 ChiTaRS:HNRNPA1 IPI:IPI01022641
ProteinModelPortal:F8VTQ5 SMR:F8VTQ5 PRIDE:F8VTQ5
Ensembl:ENST00000551702 ArrayExpress:F8VTQ5 Bgee:F8VTQ5
Uniprot:F8VTQ5
Length = 145
Score = 117 (46.2 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 32/92 (34%), Positives = 47/92 (51%)
Query: 549 KIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQS-VSRGFGFVTFKHEKSAAA 607
KIFVGG+ + L YFE+ +G IE V E T++ S RGF FVTF S
Sbjct: 57 KIFVGGIKEDTEEHHLRDYFEQ-YGKIE---VIEIMTDRGSGKKRGFAFVTFDDHDSVDK 112
Query: 608 AVQARFVTIMGKEVEIKSAVPKEVLFAELQKQ 639
V ++ T+ G E++ A+ K+ + + Q
Sbjct: 113 IVIQKYHTVNGHNCEVRKALSKQEMASASSSQ 144
>UNIPROTKB|F1LRH1 [details] [associations]
symbol:Msi1 "RNA-binding protein Musashi homolog 1"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005844 "polysome" evidence=IEA]
[GO:0008266 "poly(U) RNA binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
RGD:628778 GO:GO:0005634 GO:GO:0005737 GO:GO:0008266 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0005844 GeneTree:ENSGT00700000104255
IPI:IPI00202463 Ensembl:ENSRNOT00000001532 ArrayExpress:F1LRH1
Uniprot:F1LRH1
Length = 329
Score = 137 (53.3 bits), Expect = 7.3e-06, P = 7.3e-06
Identities = 35/84 (41%), Positives = 46/84 (54%)
Query: 549 KIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKHEKSAAAA 608
KIFVGGL + + YFE+ FG ++DA + +T + RGFGFVTF+ E
Sbjct: 77 KIFVGGLSVNTTVEDVKHYFEQ-FGKVDDAMLMFDKTTNRH--RGFGFVTFESEDIVEKV 133
Query: 609 VQARFVTIMGKEVEIKSAVPKEVL 632
+ F I K VE K A PKEV+
Sbjct: 134 CEIHFHEINNKMVECKKAQPKEVM 157
>UNIPROTKB|I3LPG0 [details] [associations]
symbol:MSI1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008266 "poly(U) RNA binding" evidence=IEA] [GO:0005844
"polysome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
GO:GO:0005737 GO:GO:0008266 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0005844 GeneTree:ENSGT00700000104255 OMA:GLPGSHP
EMBL:FP690339 Ensembl:ENSSSCT00000027694 Uniprot:I3LPG0
Length = 332
Score = 137 (53.3 bits), Expect = 7.5e-06, P = 7.5e-06
Identities = 35/84 (41%), Positives = 46/84 (54%)
Query: 549 KIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKHEKSAAAA 608
KIFVGGL + + YFE+ FG ++DA + +T + RGFGFVTF+ E
Sbjct: 77 KIFVGGLSVNTTVEDVKQYFEQ-FGKVDDAMLMFDKTTNRH--RGFGFVTFESEDIVEKV 133
Query: 609 VQARFVTIMGKEVEIKSAVPKEVL 632
+ F I K VE K A PKEV+
Sbjct: 134 CEIHFHEINNKMVECKKAQPKEVM 157
>UNIPROTKB|E2R235 [details] [associations]
symbol:ASB3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] InterPro:IPR002110 InterPro:IPR001496 Pfam:PF07525
PRINTS:PR01415 PROSITE:PS50088 PROSITE:PS50225 SMART:SM00248
SMART:SM00969 UniPathway:UPA00143 GO:GO:0035556 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
GO:GO:0016567 GO:GO:0005622 GeneTree:ENSGT00530000063050
OMA:HLAYCLK EMBL:AAEX03007517 Ensembl:ENSCAFT00000004307
Uniprot:E2R235
Length = 526
Score = 139 (54.0 bits), Expect = 7.5e-06, Sum P(2) = 7.5e-06
Identities = 46/152 (30%), Positives = 73/152 (48%)
Query: 277 AVANGSCTDKKVGPPLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKTSM 336
A A+ + T + PL LA + G DV+ +LL+ G +ALH A
Sbjct: 102 AGADPNATTLEETTPLFLAVENGQIDVLRLLLRH--GANVNGSHSMCGWNALHQAT---- 155
Query: 337 GLSQHILQN-RIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLK 395
+N I+ +LLK GA Q+ G+T L +AA G ++L LI + +N +
Sbjct: 156 -----FQENAEIIKLLLKKGANKECQDDFGITPLFVAAQYGKLESLSILISSGAN-VNCQ 209
Query: 396 TIMMETPLFFAVKNDHMVCAEVLLRWGANSEV 427
+ TPLF A + H+ C E+L+ GA+ ++
Sbjct: 210 ALDKATPLFIAAQEGHIECVELLVSSGADPDL 241
Score = 49 (22.3 bits), Expect = 7.5e-06, Sum P(2) = 7.5e-06
Identities = 17/53 (32%), Positives = 26/53 (49%)
Query: 68 DSVSCATSLVNG-DLGPVALVNEVEESSGMTALHLAAESHTARCVELLLKKRA 119
+SV C L++ D + + E G ALHLAA + V++LL+ A
Sbjct: 54 NSVECLRMLIHAVDSSENYIKTKTFE--GFCALHLAASQGHWKIVQILLEAGA 104
Score = 37 (18.1 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 10/36 (27%), Positives = 15/36 (41%)
Query: 93 SSGMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
S + + LAA + + LLKK D+ G
Sbjct: 8 SDTCSTVGLAAREGNVKVLRKLLKKGRSVDVADNRG 43
>ZFIN|ZDB-GENE-030131-2249 [details] [associations]
symbol:hnrnpa0a "heterogeneous nuclear
ribonucleoprotein A0a" species:7955 "Danio rerio" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 ZFIN:ZDB-GENE-030131-2249
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 eggNOG:COG0724
HOVERGEN:HBG002295 HOGENOM:HOG000234442 OrthoDB:EOG4W6NX4
EMBL:BC066672 IPI:IPI00995382 RefSeq:NP_997810.1 UniGene:Dr.75559
ProteinModelPortal:Q6NYB0 SMR:Q6NYB0 STRING:Q6NYB0 PRIDE:Q6NYB0
GeneID:323529 KEGG:dre:323529 CTD:323529 InParanoid:Q6NYB0
NextBio:20808302 ArrayExpress:Q6NYB0 Bgee:Q6NYB0 Uniprot:Q6NYB0
Length = 305
Score = 136 (52.9 bits), Expect = 7.9e-06, P = 7.9e-06
Identities = 36/87 (41%), Positives = 51/87 (58%)
Query: 549 KIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQS-VSRGFGFVTFKHEKSAAA 607
KIF+GGL ++ D L F + FG +E A V T+K++ RGFGFV F+ SA
Sbjct: 102 KIFIGGLKDDIEEDHLRDCFSQ-FGAVEKAEVI---TDKETGKKRGFGFVYFEDNDSADK 157
Query: 608 AVQARFVTIMGKEVEIKSAVPKEVLFA 634
AV +F I G +VE+K A+ K+ + A
Sbjct: 158 AVVLKFHMINGHKVEVKKALTKQEMQA 184
Score = 125 (49.1 bits), Expect = 0.00013, P = 0.00013
Identities = 33/82 (40%), Positives = 46/82 (56%)
Query: 549 KIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKHEKSAAAA 608
K+FVGGL D L +FE+ +G + D V + Q K+S R FGFVT+ A +A
Sbjct: 11 KLFVGGLNVQTTDDGLRNHFEQ-YGKLTDCVVVQNQQLKRS--RCFGFVTYSSPDEADSA 67
Query: 609 VQARFVTIMGKEVEIKSAVPKE 630
+ AR + G VE+K AV +E
Sbjct: 68 MSARPHILDGNNVELKRAVARE 89
>MGI|MGI:1924384 [details] [associations]
symbol:Hnrnpa0 "heterogeneous nuclear ribonucleoprotein A0"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006954 "inflammatory response" evidence=IDA]
[GO:0017091 "AU-rich element binding" evidence=ISO;IDA] [GO:0019901
"protein kinase binding" evidence=ISO] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0032496 "response to
lipopolysaccharide" evidence=IDA] [GO:0070935 "3'-UTR-mediated mRNA
stabilization" evidence=IDA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 MGI:MGI:1924384
GO:GO:0005634 GO:GO:0000166 GO:GO:0032496 GO:GO:0006954
Gene3D:3.30.70.330 GO:GO:0017091 GO:GO:0030529 eggNOG:COG0724
HSSP:P09651 GO:GO:0070935 HOVERGEN:HBG002295
GeneTree:ENSGT00700000104255 HOGENOM:HOG000234442 CTD:10949
KO:K12894 OrthoDB:EOG4W6NX4 EMBL:AK019388 EMBL:AC165251
IPI:IPI00109813 RefSeq:NP_084148.1 UniGene:Mm.490274
ProteinModelPortal:Q9CX86 SMR:Q9CX86 STRING:Q9CX86
PhosphoSite:Q9CX86 PaxDb:Q9CX86 PRIDE:Q9CX86
Ensembl:ENSMUST00000007980 GeneID:77134 KEGG:mmu:77134
UCSC:uc007qtf.2 InParanoid:Q9CX86 OMA:EDNQHAL ChiTaRS:HNRNPA0
NextBio:346544 Bgee:Q9CX86 Genevestigator:Q9CX86 Uniprot:Q9CX86
Length = 305
Score = 136 (52.9 bits), Expect = 7.9e-06, P = 7.9e-06
Identities = 53/193 (27%), Positives = 83/193 (43%)
Query: 448 LKAANTCHTNLAFLNQEKQNASLESDEDISGTCEALLSMVDDNSNTERICSG----TKIE 503
++ + C + LN + + L + GT + +V+ + R C G + +E
Sbjct: 1 MENSQLCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSR-CFGFVTYSNVE 59
Query: 504 VCKYYESHSG-CIRGSKCFYALGEEQHRKMNPGMCMIHASTQEFKSKIFVGGLPFFLDSD 562
+ S + G+ + PG HA + K+FVGGL +
Sbjct: 60 EADAAMAASPHAVDGNTVELKRAVSREDSARPGA---HAKVK----KLFVGGLKGDVAEG 112
Query: 563 SLGGYFEKHFGPIEDARVAEFQTEKQS-VSRGFGFVTFKHEKSAAAAVQARFVTIMGKEV 621
L +F + FG +E A + +KQS RGFGFV F+ +A A +F I G V
Sbjct: 113 DLIEHFSQ-FGAVEKAEII---ADKQSGKKRGFGFVYFQSHDAADKAAVVKFHPIQGHRV 168
Query: 622 EIKSAVPKEVLFA 634
E+K AVPKE + A
Sbjct: 169 EVKKAVPKEDIHA 181
>UNIPROTKB|F1S2I1 [details] [associations]
symbol:ANKDD1B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007165 "signal transduction" evidence=IEA]
InterPro:IPR000488 Pfam:PF00531 InterPro:IPR002110 PRINTS:PR01415
PROSITE:PS50017 PROSITE:PS50088 SMART:SM00248 GO:GO:0007165
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 Gene3D:1.10.533.10 InterPro:IPR011029
SUPFAM:SSF47986 GeneTree:ENSGT00660000095288 OMA:NESFREH
EMBL:CU466984 EMBL:CU466449 Ensembl:ENSSSCT00000015384
Uniprot:F1S2I1
Length = 549
Score = 123 (48.4 bits), Expect = 8.0e-06, Sum P(2) = 8.0e-06
Identities = 31/81 (38%), Positives = 47/81 (58%)
Query: 359 SQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLKTIMMETPLFFAVKNDHMVCAEVL 418
S+++K G TALH+AA G+S A++ L+ + + IN M ETP F AV+ H C+ VL
Sbjct: 221 SEKDKEGNTALHLAAKHGHSLAVQRLLAQWQE-INETNEMGETPFFLAVEGGHEECSRVL 279
Query: 419 LRWGANSEVLNLRRERPIDFA 439
L G++ + N P+ A
Sbjct: 280 LAAGSDINIPNKLNISPLQTA 300
Score = 106 (42.4 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 30/105 (28%), Positives = 55/105 (52%)
Query: 350 ILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLKTIMMETPLFFAVKN 409
+LL G+ ++ NKL ++ L A +G++ + L+ + D ++ K E+PL AV N
Sbjct: 278 VLLAAGSDINIPNKLNISPLQTATRNGHAPLVGFLLSENVD-LHQKVEPKESPLHLAVSN 336
Query: 410 DHMVCAEVLLRWGANSEVLNLRRERPIDFAKSQD----MRFLLKA 450
+H+ LL + ++LN R++ P+ A + + LLKA
Sbjct: 337 NHITVVNSLLGAQHDVDILNQRQQTPLHVAADRGNVELVEILLKA 381
Score = 66 (28.3 bits), Expect = 8.0e-06, Sum P(2) = 8.0e-06
Identities = 14/37 (37%), Positives = 21/37 (56%)
Query: 91 EESSGMTALHLAAESHTARCVELLLKKRARTDIRSKD 127
+ GM ALHLA++S+ R VE L++ D+ D
Sbjct: 155 KNQDGMNALHLASQSNNVRIVEYLIQDLHLKDLDQPD 191
Score = 60 (26.2 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 14/40 (35%), Positives = 21/40 (52%)
Query: 87 VNEVEESSGMTALHLAAESHTARCVELLLKKRARTDIRSK 126
+N V + TALH A ++ V+ LL +AR D+ K
Sbjct: 85 INAVNHMN-RTALHFAVGANHLSAVDFLLNHKARVDVADK 123
Score = 60 (26.2 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 22/83 (26%), Positives = 39/83 (46%)
Query: 75 SLVNGDLGPVALVNEVEESSGMTALHLAAESHTARCVELLLKKRARTDIRSKDGXXXXXX 134
S V+ L A V+ ++ G+T +HLAA S + + +L+ RA D R+K+
Sbjct: 106 SAVDFLLNHKARVDVADKKHGLTVIHLAAWSGSLEVMLMLV--RAGADQRAKNQDGMNAL 163
Query: 135 XXXXXXXXMDVIWNPDEYSVEDL 157
+ ++ EY ++DL
Sbjct: 164 HLASQSNNVRIV----EYLIQDL 182
>UNIPROTKB|F1MS42 [details] [associations]
symbol:MSI1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008266 "poly(U) RNA binding" evidence=IEA] [GO:0005844
"polysome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
GO:GO:0005737 GO:GO:0008266 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0005844 GeneTree:ENSGT00700000104255 OMA:GLPGSHP
EMBL:DAAA02045450 EMBL:DAAA02045451 IPI:IPI00718423
Ensembl:ENSBTAT00000012926 Uniprot:F1MS42
Length = 342
Score = 137 (53.3 bits), Expect = 8.0e-06, P = 8.0e-06
Identities = 35/84 (41%), Positives = 46/84 (54%)
Query: 549 KIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKHEKSAAAA 608
KIFVGGL + + YFE+ FG ++DA + +T + RGFGFVTF+ E
Sbjct: 90 KIFVGGLSVNTTVEDVKQYFEQ-FGKVDDAMLMFDKTTNRH--RGFGFVTFESEDIVEKV 146
Query: 609 VQARFVTIMGKEVEIKSAVPKEVL 632
+ F I K VE K A PKEV+
Sbjct: 147 CEIHFHEINNKMVECKKAQPKEVM 170
>UNIPROTKB|F6RSR1 [details] [associations]
symbol:HNRNPA0 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070935 "3'-UTR-mediated mRNA stabilization"
evidence=IEA] [GO:0032496 "response to lipopolysaccharide"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0017091 "AU-rich element binding" evidence=IEA] [GO:0006954
"inflammatory response" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005634 GO:GO:0000166 GO:GO:0032496
GO:GO:0006954 Gene3D:3.30.70.330 GO:GO:0017091 GO:GO:0070935
GeneTree:ENSGT00700000104255 OMA:GPMKQNL EMBL:DAAA02020383
IPI:IPI00687625 Ensembl:ENSBTAT00000022514 Uniprot:F6RSR1
Length = 310
Score = 136 (52.9 bits), Expect = 8.2e-06, P = 8.2e-06
Identities = 52/189 (27%), Positives = 82/189 (43%)
Query: 448 LKAANTCHTNLAFLNQEKQNASLESDEDISGTCEALLSMVDDNSNTERICSG----TKIE 503
++ + C + LN + + L + GT + +V+ + R C G + +E
Sbjct: 6 MENSQLCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSR-CFGFVTYSNVE 64
Query: 504 VCKYYESHSG-CIRGSKCFYALGEEQHRKMNPGMCMIHASTQEFKSKIFVGGLPFFLDSD 562
+ S + G+ + PG HA + K+FVGGL +
Sbjct: 65 EADAAMAASPHAVDGNTVELKRAVSREDSARPGA---HAKVK----KLFVGGLKGDVAEG 117
Query: 563 SLGGYFEKHFGPIEDARVAEFQTEKQS-VSRGFGFVTFKHEKSAAAAVQARFVTIMGKEV 621
L +F + FG +E A + +KQS RGFGFV F++ +A A +F I G V
Sbjct: 118 DLIEHFSQ-FGTVEKAEII---ADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRV 173
Query: 622 EIKSAVPKE 630
E+K AVPKE
Sbjct: 174 EVKKAVPKE 182
>UNIPROTKB|E2RBV8 [details] [associations]
symbol:HNRNPA0 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0070935 "3'-UTR-mediated mRNA
stabilization" evidence=IEA] [GO:0032496 "response to
lipopolysaccharide" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0017091 "AU-rich element binding"
evidence=IEA] [GO:0006954 "inflammatory response" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
GO:GO:0000166 GO:GO:0032496 GO:GO:0006954 Gene3D:3.30.70.330
GO:GO:0017091 GO:GO:0070935 GeneTree:ENSGT00700000104255 CTD:10949
KO:K12894 OMA:GPMKQNL EMBL:AAEX03007810 RefSeq:XP_538645.2
ProteinModelPortal:E2RBV8 Ensembl:ENSCAFT00000001730 GeneID:481524
KEGG:cfa:481524 NextBio:20856300 Uniprot:E2RBV8
Length = 310
Score = 136 (52.9 bits), Expect = 8.2e-06, P = 8.2e-06
Identities = 52/189 (27%), Positives = 82/189 (43%)
Query: 448 LKAANTCHTNLAFLNQEKQNASLESDEDISGTCEALLSMVDDNSNTERICSG----TKIE 503
++ + C + LN + + L + GT + +V+ + R C G + +E
Sbjct: 1 MENSQLCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSR-CFGFVTYSNVE 59
Query: 504 VCKYYESHSG-CIRGSKCFYALGEEQHRKMNPGMCMIHASTQEFKSKIFVGGLPFFLDSD 562
+ S + G+ + PG HA + K+FVGGL +
Sbjct: 60 EADAAMAASPHAVDGNTVELKRAVSREDSARPGA---HAKVK----KLFVGGLKGDVAEG 112
Query: 563 SLGGYFEKHFGPIEDARVAEFQTEKQS-VSRGFGFVTFKHEKSAAAAVQARFVTIMGKEV 621
L +F + FG +E A + +KQS RGFGFV F++ +A A +F I G V
Sbjct: 113 DLIEHFSQ-FGTVEKAEII---ADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRV 168
Query: 622 EIKSAVPKE 630
E+K AVPKE
Sbjct: 169 EVKKAVPKE 177
>ZFIN|ZDB-GENE-091113-6 [details] [associations]
symbol:si:ch211-263m18.3 "si:ch211-263m18.3"
species:7955 "Danio rerio" [GO:0007165 "signal transduction"
evidence=IEA] InterPro:IPR000488 Pfam:PF00531 InterPro:IPR002110
Pfam:PF00023 PRINTS:PR01415 PROSITE:PS50017 PROSITE:PS50088
SMART:SM00005 SMART:SM00248 ZFIN:ZDB-GENE-091113-6 GO:GO:0007165
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 Gene3D:1.10.533.10 InterPro:IPR011029
SUPFAM:SSF47986 InterPro:IPR000906 Pfam:PF00791 SMART:SM00218
PROSITE:PS51145 GeneTree:ENSGT00700000104348 EMBL:AL773542
EMBL:BX927332 IPI:IPI00632236 Ensembl:ENSDART00000065998
Uniprot:E7F0U4
Length = 1923
Score = 133 (51.9 bits), Expect = 8.3e-06, Sum P(3) = 8.3e-06
Identities = 47/166 (28%), Positives = 76/166 (45%)
Query: 275 FGAVANGSCTDKKVGPPLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKT 334
+GA AN PL LA+Q G D++ +L+ + G + LH L
Sbjct: 657 YGANANSESLQGIT--PLHLASQEGQPDMVALLISKQANVNLGNKN---GLTPLH--LVA 709
Query: 335 SMGLSQHILQNRIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINL 394
G H+ I +L+K GA V +++G T LH+A GN + ++ L++++ +N
Sbjct: 710 QEG---HV---GIADMLVKQGASVYAASRMGYTPLHVACHYGNIKMVKFLLQQQAH-VNS 762
Query: 395 KTIMMETPLFFAVKNDHMVCAEVLLRWGANSEVLNLRRERPIDFAK 440
KT + TPL A + H +LL+ GA + P+ AK
Sbjct: 763 KTRLGYTPLHQAAQQGHTDIVTLLLKHGALPNEITTNGTSPLGIAK 808
Score = 127 (49.8 bits), Expect = 3.4e-05, Sum P(3) = 3.4e-05
Identities = 44/161 (27%), Positives = 74/161 (45%)
Query: 291 PLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKTSMGLSQHILQNRIVGI 350
PL +A G ++++LL G + LH A K + H+ R + +
Sbjct: 374 PLHVAAHCGHHRMVKVLLDK---GAKANARALNGFTPLHIACKKN-----HM---RSMDL 422
Query: 351 LLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRK--EPDCINLKTIMMETPLFFAVK 408
LLKH A + + GLT LH+AA G+ ++ L+++ P+ N+K +ETPL A +
Sbjct: 423 LLKHSASLEAVTESGLTPLHVAAFMGHLNIVKSLLQRGASPNASNVK---VETPLHMAAR 479
Query: 409 NDHMVCAEVLLRWGANSEVLNLRRERPIDFAKSQDMRFLLK 449
H A+ LL+ A + + P+ A + L+K
Sbjct: 480 AGHCEVAQFLLQNNAQVDAKAKDDQTPLHCAARMGHKELVK 520
Score = 120 (47.3 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 49/164 (29%), Positives = 70/164 (42%)
Query: 276 GAVANGSCTDKKVGPPLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKTS 335
GA N S + KV PL +A +AG +V + LL++ + LHCA +
Sbjct: 460 GASPNAS--NVKVETPLHMAARAGHCEVAQFLLQNNAQVDAKAKDD---QTPLHCAAR-- 512
Query: 336 MGLSQHILQNRIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLK 395
MG H +V +L++H A G T LHIAA G++Q L+ + +
Sbjct: 513 MG---H---KELVKLLMEHKANPDSATTAGHTPLHIAAREGHAQTTRILLDENAQQTKM- 565
Query: 396 TIMMETPLFFAVKNDHMVCAEVLLRWGANSEVLNLRRERPIDFA 439
T TPL A K + E+LL GAN P+ A
Sbjct: 566 TKKGFTPLHVACKYGKVDVVELLLERGANPNAAGKNGLTPLHVA 609
Score = 118 (46.6 bits), Expect = 0.00069, Sum P(3) = 0.00069
Identities = 46/168 (27%), Positives = 74/168 (44%)
Query: 279 ANGSCTDKKVGPPLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKTSMGL 338
AN + T K PL +A++ G+ ++ +LL + LHCA +
Sbjct: 263 ANVNFTPKNGITPLHIASRRGNVIMVRLLLDRGAQIDAKTKDEL---TPLHCAARNG--- 316
Query: 339 SQHILQNRIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLKTIM 398
H+ R+V ILL GA + + K GL+ +H+AA + + L++ + ++ T+
Sbjct: 317 --HV---RVVEILLDQGAPLQAKTKNGLSPIHMAAQGDHMDCVRQLLQYNAEIDDI-TLD 370
Query: 399 METPLFFAVKNDHMVCAEVLLRWGANSEVLNLRRERPIDFA-KSQDMR 445
TPL A H +VLL GA + L P+ A K MR
Sbjct: 371 HLTPLHVAAHCGHHRMVKVLLDKGAKANARALNGFTPLHIACKKNHMR 418
Score = 113 (44.8 bits), Expect = 0.00089, Sum P(3) = 0.00089
Identities = 71/342 (20%), Positives = 134/342 (39%)
Query: 96 MTALHLAAESHTARCVELLLKKRARTDIRSKDGXXXXXXXXXXXXXXMDVIWNPDEYSVE 155
+T LH AA + R VE+LL + A ++K+G MD + +Y+ E
Sbjct: 306 LTPLHCAARNGHVRVVEILLDQGAPLQAKTKNGLSPIHMAAQGDH--MDCVRQLLQYNAE 363
Query: 156 DLVVILGQKNLTTVKLLS-----QKTKEL-DEVAYANXXXXXXXXXXXXXXXXXDKVNES 209
+ L +LT + + + + K L D+ A AN +
Sbjct: 364 IDDITLD--HLTPLHVAAHCGHHRMVKVLLDKGAKANARALNGFTPLHIACKKNHMRSMD 421
Query: 210 ILVLHDSDLGAKEKTTIYECVIREALALGRATKLQRAVKRNSTPTTSQSAEKRKXXXXXX 269
+L+ H + L A ++ + + A +G ++ ++R ++P S +
Sbjct: 422 LLLKHSASLEAVTESGLTP--LHVAAFMGHLNIVKSLLQRGASPNASNVKVETPLHMAAR 479
Query: 270 XXXXXFGA--VANGSCTDKKVGP---PLILATQAGDEDVIEILLKSKXXXXXXXXXXXXG 324
+ N + D K PL A + G ++++++L++ K G
Sbjct: 480 AGHCEVAQFLLQNNAQVDAKAKDDQTPLHCAARMGHKELVKLLMEHKANPDSATTA---G 536
Query: 325 NSALHCALKTSMGLSQHILQNRIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDL 384
++ LH A + H RI LL A ++ K G T LH+A G +E L
Sbjct: 537 HTPLHIAAREG-----HAQTTRI---LLDENAQQTKMTKKGFTPLHVACKYGKVDVVELL 588
Query: 385 IRK--EPDCINLKTIMMETPLFFAVKNDHMVCAEVLLRWGAN 424
+ + P+ + TPL AV ++++ ++L+ G +
Sbjct: 589 LERGANPNAAGKNGL---TPLHVAVHHNNLDVVKLLVSKGGS 627
Score = 70 (29.7 bits), Expect = 8.3e-06, Sum P(3) = 8.3e-06
Identities = 21/67 (31%), Positives = 37/67 (55%)
Query: 61 LRVSCIFDSVSCATSLVNGDLGPVALVNEVEESSGMTALHLAAESHTARCVELLLKKRAR 120
L ++ ++++S A L+N A VN ++ G+T LH+A+ V LLL + A+
Sbjct: 243 LHIAAHYENLSVAQLLLNRG----ANVNFTPKN-GITPLHIASRRGNVIMVRLLLDRGAQ 297
Query: 121 TDIRSKD 127
D ++KD
Sbjct: 298 IDAKTKD 304
Score = 66 (28.3 bits), Expect = 2.1e-05, Sum P(3) = 2.1e-05
Identities = 19/68 (27%), Positives = 29/68 (42%)
Query: 61 LRVSCIFDSVSCATSLVNGDLGPVALVNEVEESSGMTALHLAAESHTARCVELLLKKRAR 120
L ++ D A L+ D P +V +G T LH+AA +LLL + A
Sbjct: 210 LHIAARNDDTRTAAVLLQNDPNP-----DVLSKTGFTPLHIAAHYENLSVAQLLLNRGAN 264
Query: 121 TDIRSKDG 128
+ K+G
Sbjct: 265 VNFTPKNG 272
Score = 62 (26.9 bits), Expect = 5.1e-05, Sum P(3) = 5.1e-05
Identities = 23/85 (27%), Positives = 36/85 (42%)
Query: 47 LDNADQQTAIVTK---LLRVSCIFDSVSCATSLVNGDLGPVALVNEVEESSGMTALHLAA 103
LD QQT + K L V+C + V L+ P A +G+T LH+A
Sbjct: 556 LDENAQQTKMTKKGFTPLHVACKYGKVDVVELLLERGANPNAA-----GKNGLTPLHVAV 610
Query: 104 ESHTARCVELLLKKRARTDIRSKDG 128
+ V+LL+ K +++G
Sbjct: 611 HHNNLDVVKLLVSKGGSPHSTARNG 635
Score = 59 (25.8 bits), Expect = 0.00010, Sum P(3) = 0.00010
Identities = 19/58 (32%), Positives = 28/58 (48%)
Query: 73 ATSLVNGDLGPVAL-VNEVEESS-GMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
A +L G VAL +N + + ALH+AA + R +LL+ D+ SK G
Sbjct: 182 AVALQQGHENVVALLINYGTKGKVRLPALHIAARNDDTRTAAVLLQNDPNPDVLSKTG 239
Score = 58 (25.5 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 12/35 (34%), Positives = 21/35 (60%)
Query: 94 SGMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
+G T LH+A + + R ++LLLK A + ++ G
Sbjct: 403 NGFTPLHIACKKNHMRSMDLLLKHSASLEAVTESG 437
Score = 54 (24.1 bits), Expect = 0.00031, Sum P(3) = 0.00031
Identities = 10/34 (29%), Positives = 19/34 (55%)
Query: 89 EVEESSGMTALHLAAESHTARCVELLLKKRARTD 122
+ + +G++ +H+AA+ CV LL+ A D
Sbjct: 332 QAKTKNGLSPIHMAAQGDHMDCVRQLLQYNAEID 365
Score = 53 (23.7 bits), Expect = 0.00039, Sum P(3) = 0.00039
Identities = 20/86 (23%), Positives = 38/86 (44%)
Query: 43 IDNSLDNADQQTAIVTKLLRVSCIFDSVSCATSLVNGDLGPVALVNEVEESSGMTALHLA 102
+ N +D + T L ++ + L+N G A VN + G + L++A
Sbjct: 98 LHNGID-LETTTKKGNTALHIAALAGQEKVVAELIN--YG--ANVN-AQSQKGFSPLYMA 151
Query: 103 AESHTARCVELLLKKRARTDIRSKDG 128
A+ + V+ LL+ A + ++DG
Sbjct: 152 AQENHLEVVKYLLEHGANQSLPTEDG 177
Score = 52 (23.4 bits), Expect = 0.00049, Sum P(3) = 0.00049
Identities = 12/36 (33%), Positives = 20/36 (55%)
Query: 93 SSGMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
++G T LH+AA A+ +LL + A+ +K G
Sbjct: 534 TAGHTPLHIAAREGHAQTTRILLDENAQQTKMTKKG 569
Score = 47 (21.6 bits), Expect = 8.3e-06, Sum P(3) = 8.3e-06
Identities = 16/60 (26%), Positives = 28/60 (46%)
Query: 823 ALQLSKNGNPSSPVNSASDS----NECDRNDSKSPQDLRSVSISSTIERK-PTNEVPKGS 877
+L S G PSS + AS S E + + D++ +S++ E+ + VPK +
Sbjct: 1649 SLPCSSLGRPSSGASGASGSIMELEEEEEEEEIEEDDIQHEPVSASAEKAWASGAVPKAN 1708
Score = 37 (18.1 bits), Expect = 8.0e-05, Sum P(3) = 8.0e-05
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 694 ATAEKSWAGRLLYGQPKTSSN 714
A+AEK+WA + PK + N
Sbjct: 1693 ASAEKAWASGAV---PKANYN 1710
>UNIPROTKB|F1RH94 [details] [associations]
symbol:HNRNPA0 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070935 "3'-UTR-mediated mRNA stabilization"
evidence=IEA] [GO:0032496 "response to lipopolysaccharide"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0017091 "AU-rich element binding" evidence=IEA] [GO:0006954
"inflammatory response" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005634 GO:GO:0000166 GO:GO:0032496
GO:GO:0006954 Gene3D:3.30.70.330 GO:GO:0017091 GO:GO:0070935
GeneTree:ENSGT00700000104255 OMA:GPMKQNL EMBL:CU468422
Ensembl:ENSSSCT00000015648 Uniprot:F1RH94
Length = 315
Score = 136 (52.9 bits), Expect = 8.5e-06, P = 8.5e-06
Identities = 52/189 (27%), Positives = 82/189 (43%)
Query: 448 LKAANTCHTNLAFLNQEKQNASLESDEDISGTCEALLSMVDDNSNTERICSG----TKIE 503
++ + C + LN + + L + GT + +V+ + R C G + +E
Sbjct: 6 MENSQLCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSR-CFGFVTYSNVE 64
Query: 504 VCKYYESHSG-CIRGSKCFYALGEEQHRKMNPGMCMIHASTQEFKSKIFVGGLPFFLDSD 562
+ S + G+ + PG HA + K+FVGGL +
Sbjct: 65 EADAAMAASPHAVDGNTVELKRAVSREDSARPGA---HAKVK----KLFVGGLKGDVAEG 117
Query: 563 SLGGYFEKHFGPIEDARVAEFQTEKQS-VSRGFGFVTFKHEKSAAAAVQARFVTIMGKEV 621
L +F + FG +E A + +KQS RGFGFV F++ +A A +F I G V
Sbjct: 118 DLIEHFSQ-FGTVEKAEII---ADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRV 173
Query: 622 EIKSAVPKE 630
E+K AVPKE
Sbjct: 174 EVKKAVPKE 182
>UNIPROTKB|Q3ZC44 [details] [associations]
symbol:HNRNPAB "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0030529
eggNOG:COG0724 HOGENOM:HOG000234441 HOVERGEN:HBG002295
GeneTree:ENSGT00700000104347 KO:K13044 InterPro:IPR012956
Pfam:PF08143 CTD:3182 OMA:FILFKDP EMBL:DAAA02020063
EMBL:DAAA02020062 EMBL:BC102923 IPI:IPI00843025
RefSeq:NP_001035612.1 UniGene:Bt.58979 SMR:Q3ZC44
Ensembl:ENSBTAT00000018114 GeneID:513410 KEGG:bta:513410
NextBio:20870841 Uniprot:Q3ZC44
Length = 285
Score = 135 (52.6 bits), Expect = 8.6e-06, P = 8.6e-06
Identities = 40/112 (35%), Positives = 58/112 (51%)
Query: 524 LGEEQHRK----MNPGMCMIHASTQEFKSKIFVGGLPFFLDSDSLGGYFEKHFGPIEDAR 579
L +++HR ++P M A ++ KIFVGGL + + YF + FG IE
Sbjct: 128 LDQKEHRLDGRVIDPKKAM--AMKKDPVKKIFVGGLNPEATEEKIREYFGE-FGEIEAIE 184
Query: 580 VAEFQTEKQSVSRGFGFVTFKHEKSAAAAVQARFVTIMGKEVEIKSAVPKEV 631
+ K + RGF F+TFK E+ ++ +F TI G + EIK A PKEV
Sbjct: 185 LP--MDPKSNKRRGFVFITFKEEEPVKKVLEKKFHTISGSKCEIKVAQPKEV 234
>RGD|620145 [details] [associations]
symbol:Rbm3 "RNA binding motif (RNP1, RRM) protein 3"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0006412 "translation"
evidence=ISO] [GO:0006417 "regulation of translation"
evidence=ISO;ISS] [GO:0006950 "response to stress" evidence=IEA]
[GO:0009409 "response to cold" evidence=ISO] [GO:0015934 "large
ribosomal subunit" evidence=IDA] [GO:0030425 "dendrite"
evidence=IDA] [GO:0035196 "production of miRNAs involved in gene
silencing by miRNA" evidence=ISO] [GO:0043023 "ribosomal large
subunit binding" evidence=ISO] [GO:0045727 "positive regulation of
translation" evidence=IDA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 RGD:620145 GO:GO:0005634
GO:GO:0005737 GO:GO:0000166 GO:GO:0006412 GO:GO:0030425
GO:GO:0009409 Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0045727
eggNOG:COG0724 HOVERGEN:HBG107480 HSSP:P09651 HOGENOM:HOG000276232
OrthoDB:EOG4HHP40 GO:GO:0035196 GO:GO:0043023 CTD:5935 KO:K13186
EMBL:FM093406 EMBL:AF355190 IPI:IPI00367437 IPI:IPI00955177
RefSeq:NP_446148.1 UniGene:Rn.18057 ProteinModelPortal:Q925G0
MINT:MINT-4611770 STRING:Q925G0 PRIDE:Q925G0 GeneID:114488
KEGG:rno:114488 UCSC:RGD:620145 InParanoid:Q925G0 NextBio:618509
Genevestigator:Q925G0 Uniprot:Q925G0
Length = 155
Score = 116 (45.9 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 29/81 (35%), Positives = 47/81 (58%)
Query: 547 KSKIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKHEKSAA 606
+ K+FVGGL F D +L +F FGPI + V + E Q SRGFGF+TF + + A+
Sbjct: 5 EGKLFVGGLNFNTDEQALEDHFSS-FGPISEVVVVK-DRETQR-SRGFGFITFTNPEHAS 61
Query: 607 AAVQA-RFVTIMGKEVEIKSA 626
++A ++ G+++ + A
Sbjct: 62 DVMRAMNGESLDGRQIRVDHA 82
>UNIPROTKB|O43347 [details] [associations]
symbol:MSI1 "RNA-binding protein Musashi homolog 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005844 "polysome" evidence=IEA] [GO:0008266
"poly(U) RNA binding" evidence=IEA] [GO:0009725 "response to
hormone stimulus" evidence=IEA] [GO:0030855 "epithelial cell
differentiation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0003723 "RNA binding"
evidence=TAS] [GO:0007399 "nervous system development"
evidence=TAS] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0005737
GO:GO:0007399 GO:GO:0008266 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003723 GO:GO:0009725 GO:GO:0005844 GO:GO:0030855
eggNOG:COG0724 HOGENOM:HOG000234441 HOVERGEN:HBG002295 KO:K14411
EMBL:AB012851 EMBL:AC003982 EMBL:AB072590 EMBL:AB072591
EMBL:AB072592 EMBL:AB073212 IPI:IPI00001007 RefSeq:NP_002433.1
UniGene:Hs.158311 ProteinModelPortal:O43347 SMR:O43347
IntAct:O43347 MINT:MINT-1432501 STRING:O43347 PhosphoSite:O43347
PaxDb:O43347 PRIDE:O43347 DNASU:4440 Ensembl:ENST00000257552
GeneID:4440 KEGG:hsa:4440 UCSC:uc001tye.1 CTD:4440
GeneCards:GC12M120779 HGNC:HGNC:7330 HPA:CAB022337 MIM:603328
neXtProt:NX_O43347 PharmGKB:PA31137 InParanoid:O43347 OMA:GLPGSHP
OrthoDB:EOG48GW3J GenomeRNAi:4440 NextBio:17313 ArrayExpress:O43347
Bgee:O43347 CleanEx:HS_MSI1 Genevestigator:O43347
GermOnline:ENSG00000135097 Uniprot:O43347
Length = 362
Score = 137 (53.3 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 35/84 (41%), Positives = 46/84 (54%)
Query: 549 KIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKHEKSAAAA 608
KIFVGGL + + YFE+ FG ++DA + +T + RGFGFVTF+ E
Sbjct: 110 KIFVGGLSVNTTVEDVKQYFEQ-FGKVDDAMLMFDKTTNRH--RGFGFVTFESEDIVEKV 166
Query: 609 VQARFVTIMGKEVEIKSAVPKEVL 632
+ F I K VE K A PKEV+
Sbjct: 167 CEIHFHEINNKMVECKKAQPKEVM 190
>MGI|MGI:107376 [details] [associations]
symbol:Msi1 "musashi RNA-binding protein 1" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0003727 "single-stranded RNA binding"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005844 "polysome" evidence=IDA]
[GO:0008266 "poly(U) RNA binding" evidence=IDA] [GO:0009725
"response to hormone stimulus" evidence=ISO] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
MGI:MGI:107376 GO:GO:0005634 GO:GO:0005737 GO:GO:0008266
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0009725 GO:GO:0005844
GO:GO:0030855 eggNOG:COG0724 HOVERGEN:HBG002295 KO:K14411
GeneTree:ENSGT00700000104255 CTD:4440 OMA:GLPGSHP OrthoDB:EOG48GW3J
EMBL:D49654 EMBL:AK084019 IPI:IPI00121300 IPI:IPI00462260
RefSeq:NP_032655.1 UniGene:Mm.5077 PDB:1UAW PDB:2MSS PDB:2MST
PDB:2RS2 PDBsum:1UAW PDBsum:2MSS PDBsum:2MST PDBsum:2RS2
ProteinModelPortal:Q61474 SMR:Q61474 STRING:Q61474
PhosphoSite:Q61474 PaxDb:Q61474 PRIDE:Q61474 DNASU:17690
Ensembl:ENSMUST00000150779 GeneID:17690 KEGG:mmu:17690
UCSC:uc008zdu.1 UCSC:uc008zdv.1 InParanoid:Q61474 ChiTaRS:MSI1
EvolutionaryTrace:Q61474 NextBio:292270 Bgee:Q61474 CleanEx:MM_MSI1
Genevestigator:Q61474 GermOnline:ENSMUSG00000054256 Uniprot:Q61474
Length = 362
Score = 137 (53.3 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 35/84 (41%), Positives = 46/84 (54%)
Query: 549 KIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKHEKSAAAA 608
KIFVGGL + + YFE+ FG ++DA + +T + RGFGFVTF+ E
Sbjct: 110 KIFVGGLSVNTTVEDVKHYFEQ-FGKVDDAMLMFDKTTNRH--RGFGFVTFESEDIVEKV 166
Query: 609 VQARFVTIMGKEVEIKSAVPKEVL 632
+ F I K VE K A PKEV+
Sbjct: 167 CEIHFHEINNKMVECKKAQPKEVM 190
>RGD|628778 [details] [associations]
symbol:Msi1 "musashi RNA-binding protein 1" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=NAS] [GO:0003727 "single-stranded RNA binding"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0005844 "polysome"
evidence=IEA;ISO] [GO:0008266 "poly(U) RNA binding"
evidence=IEA;ISO] [GO:0009725 "response to hormone stimulus"
evidence=IMP] [GO:0030855 "epithelial cell differentiation"
evidence=IEP] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 RGD:628778 GO:GO:0005634
GO:GO:0005737 GO:GO:0008266 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003723 GO:GO:0009725 GO:GO:0005844 GO:GO:0030855
eggNOG:COG0724 HOGENOM:HOG000234441 HOVERGEN:HBG002295 KO:K14411
CTD:4440 OrthoDB:EOG48GW3J EMBL:AY043393 IPI:IPI00202463
RefSeq:NP_683688.1 UniGene:Rn.162146 ProteinModelPortal:Q8K3P4
SMR:Q8K3P4 STRING:Q8K3P4 PhosphoSite:Q8K3P4 GeneID:259272
KEGG:rno:259272 NextBio:624325 ArrayExpress:Q8K3P4
Genevestigator:Q8K3P4 Uniprot:Q8K3P4
Length = 362
Score = 137 (53.3 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 35/84 (41%), Positives = 46/84 (54%)
Query: 549 KIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKHEKSAAAA 608
KIFVGGL + + YFE+ FG ++DA + +T + RGFGFVTF+ E
Sbjct: 110 KIFVGGLSVNTTVEDVKHYFEQ-FGKVDDAMLMFDKTTNRH--RGFGFVTFESEDIVEKV 166
Query: 609 VQARFVTIMGKEVEIKSAVPKEVL 632
+ F I K VE K A PKEV+
Sbjct: 167 CEIHFHEINNKMVECKKAQPKEVM 190
>UNIPROTKB|Q8K3P4 [details] [associations]
symbol:Msi1 "RNA-binding protein Musashi homolog 1"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 RGD:628778 GO:GO:0005634
GO:GO:0005737 GO:GO:0008266 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003723 GO:GO:0009725 GO:GO:0005844 GO:GO:0030855
eggNOG:COG0724 HOGENOM:HOG000234441 HOVERGEN:HBG002295 KO:K14411
CTD:4440 OrthoDB:EOG48GW3J EMBL:AY043393 IPI:IPI00202463
RefSeq:NP_683688.1 UniGene:Rn.162146 ProteinModelPortal:Q8K3P4
SMR:Q8K3P4 STRING:Q8K3P4 PhosphoSite:Q8K3P4 GeneID:259272
KEGG:rno:259272 NextBio:624325 ArrayExpress:Q8K3P4
Genevestigator:Q8K3P4 Uniprot:Q8K3P4
Length = 362
Score = 137 (53.3 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 35/84 (41%), Positives = 46/84 (54%)
Query: 549 KIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKHEKSAAAA 608
KIFVGGL + + YFE+ FG ++DA + +T + RGFGFVTF+ E
Sbjct: 110 KIFVGGLSVNTTVEDVKHYFEQ-FGKVDDAMLMFDKTTNRH--RGFGFVTFESEDIVEKV 166
Query: 609 VQARFVTIMGKEVEIKSAVPKEVL 632
+ F I K VE K A PKEV+
Sbjct: 167 CEIHFHEINNKMVECKKAQPKEVM 190
>TAIR|locus:2077392 [details] [associations]
symbol:AT3G07810 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0005576 "extracellular region" evidence=ISM] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
EMBL:CP002686 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
KO:K14411 IPI:IPI00546643 RefSeq:NP_850539.1 UniGene:At.19375
ProteinModelPortal:F4JFN7 SMR:F4JFN7 PRIDE:F4JFN7
EnsemblPlants:AT3G07810.2 GeneID:819972 KEGG:ath:AT3G07810
OMA:YYIGNTN Uniprot:F4JFN7
Length = 495
Score = 139 (54.0 bits), Expect = 9.6e-06, P = 9.6e-06
Identities = 34/84 (40%), Positives = 47/84 (55%)
Query: 549 KIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVA-EFQTEKQSVSRGFGFVTFKHEKSAAA 607
KIFVGGLP + YFE+ FG D V + T++ RGFGF+T+ E++
Sbjct: 109 KIFVGGLPSSVTESDFKTYFEQ-FGTTTDVVVMYDHNTQRP---RGFGFITYDSEEAVEK 164
Query: 608 AVQARFVTIMGKEVEIKSAVPKEV 631
+ F + GK VE+K AVPKE+
Sbjct: 165 VLLKTFHELNGKMVEVKRAVPKEL 188
>ZFIN|ZDB-GENE-081104-19 [details] [associations]
symbol:si:ch211-173b16.3 "si:ch211-173b16.3"
species:7955 "Danio rerio" [GO:0007165 "signal transduction"
evidence=IEA] InterPro:IPR000488 Pfam:PF00531 InterPro:IPR002110
Pfam:PF00023 PRINTS:PR01415 PROSITE:PS50017 PROSITE:PS50088
SMART:SM00005 SMART:SM00248 ZFIN:ZDB-GENE-081104-19 GO:GO:0007165
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 Gene3D:1.10.533.10 InterPro:IPR011029
SUPFAM:SSF47986 InterPro:IPR000906 Pfam:PF00791 SMART:SM00218
PROSITE:PS51145 GeneTree:ENSGT00700000104348 EMBL:CT033825
EMBL:CABZ01065994 EMBL:CABZ01065995 EMBL:CABZ01065996
IPI:IPI00483377 Ensembl:ENSDART00000090092 Bgee:F1R4Z7
Uniprot:F1R4Z7
Length = 1929
Score = 144 (55.7 bits), Expect = 9.7e-06, Sum P(3) = 9.7e-06
Identities = 52/153 (33%), Positives = 75/153 (49%)
Query: 276 GAVANGSCTDKKVGPPLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKTS 335
GA AN PL LA+Q G D++ +LL SK G + LH L
Sbjct: 618 GASANAESLQGVT--PLHLASQEGQPDMV-LLLISKQANVNLGNKS--GLTPLH--LVAQ 670
Query: 336 MGLSQHILQNRIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLK 395
G H+ I IL+KHGA V ++G T LH+A GN + ++ L++++ + +N K
Sbjct: 671 EG---HV---GIADILVKHGASVYAATRMGYTPLHVACHYGNIKMVKFLLQQQAN-VNCK 723
Query: 396 TIMMETPLFFAVKNDHMVCAEVLLRWGAN-SEV 427
T M TPL A + H +LL+ GA +EV
Sbjct: 724 TRMSYTPLHQAAQQGHTDIVTLLLKHGAQPNEV 756
Score = 132 (51.5 bits), Expect = 0.00016, Sum P(3) = 0.00016
Identities = 54/189 (28%), Positives = 88/189 (46%)
Query: 287 KVG-PPLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKTSMGLSQHILQN 345
KVG PL +A + DV+ +LL SK G + LH A K + Q
Sbjct: 560 KVGLTPLHVAVHHNNLDVVNLLL-SKGGSPHSAARN--GYTPLHIASKQN--------QA 608
Query: 346 RIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLKTIMMETPLFF 405
+ LL+HGA + ++ G+T LH+A+ G + LI K+ + +NL TPL
Sbjct: 609 EVASSLLQHGASANAESLQGVTPLHLASQEGQPDMVLLLISKQAN-VNLGNKSGLTPLHL 667
Query: 406 AVKNDHMVCAEVLLRWGANSEVLNLRRERPIDFA----KSQDMRFLLKA-ANT-CHTNLA 459
+ H+ A++L++ GA+ P+ A + ++FLL+ AN C T ++
Sbjct: 668 VAQEGHVGIADILVKHGASVYAATRMGYTPLHVACHYGNIKMVKFLLQQQANVNCKTRMS 727
Query: 460 F--LNQEKQ 466
+ L+Q Q
Sbjct: 728 YTPLHQAAQ 736
Score = 67 (28.6 bits), Expect = 9.7e-06, Sum P(3) = 9.7e-06
Identities = 20/67 (29%), Positives = 37/67 (55%)
Query: 61 LRVSCIFDSVSCATSLVNGDLGPVALVNEVEESSGMTALHLAAESHTARCVELLLKKRAR 120
L ++ +++++ A L+N A VN ++ G+T LH+A+ V LLL + A+
Sbjct: 204 LHIAAHYENLNVAQLLLNRG----ADVNFTPKN-GITPLHIASRRGNVIMVRLLLDRGAK 258
Query: 121 TDIRSKD 127
D ++KD
Sbjct: 259 IDAKTKD 265
Score = 65 (27.9 bits), Expect = 1.5e-05, Sum P(3) = 1.5e-05
Identities = 19/68 (27%), Positives = 29/68 (42%)
Query: 61 LRVSCIFDSVSCATSLVNGDLGPVALVNEVEESSGMTALHLAAESHTARCVELLLKKRAR 120
L ++ D A L+ D P +V +G T LH+AA +LLL + A
Sbjct: 171 LHIAARNDDTRTAAVLLQNDPNP-----DVLSKTGFTPLHIAAHYENLNVAQLLLNRGAD 225
Query: 121 TDIRSKDG 128
+ K+G
Sbjct: 226 VNFTPKNG 233
Score = 63 (27.2 bits), Expect = 2.4e-05, Sum P(3) = 2.4e-05
Identities = 21/68 (30%), Positives = 32/68 (47%)
Query: 61 LRVSCIFDSVSCATSLVNGDLGPVALVNEVEESSGMTALHLAAESHTARCVELLLKKRAR 120
L ++ + T LVN G A VN + G T L++AA+ + V+ LL A
Sbjct: 76 LHIAALAGQEQVVTELVN--YG--ANVN-AQSQKGFTPLYMAAQENHLEVVKFLLDNGAN 130
Query: 121 TDIRSKDG 128
I ++DG
Sbjct: 131 QTIPTEDG 138
Score = 61 (26.5 bits), Expect = 3.8e-05, Sum P(3) = 3.8e-05
Identities = 19/58 (32%), Positives = 28/58 (48%)
Query: 73 ATSLVNGDLGPVAL-VNEVEESS-GMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
A +L G VAL +N + + ALH+AA + R +LL+ D+ SK G
Sbjct: 143 AVALQQGHENVVALLINHGTKGKVRLPALHIAARNDDTRTAAVLLQNDPNPDVLSKTG 200
Score = 58 (25.5 bits), Expect = 7.5e-05, Sum P(3) = 7.5e-05
Identities = 12/35 (34%), Positives = 21/35 (60%)
Query: 94 SGMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
+G T LH+A + + R ++LLLK A + ++ G
Sbjct: 364 NGFTPLHIACKKNHMRVMDLLLKHSASLEAVTESG 398
Score = 57 (25.1 bits), Expect = 9.4e-05, Sum P(3) = 9.4e-05
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 96 MTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
+T LH AA + R +E+LL + A ++K+G
Sbjct: 267 LTPLHCAARNGHVRIIEILLDQGAPIQAKTKNG 299
Score = 56 (24.8 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 29/117 (24%), Positives = 49/117 (41%)
Query: 72 CATSLVNGDLGPVALVNEVEESS----GMTALHLAA-ESHTARCVELLLKKRARTDIRSK 126
CA+ + + ++ + L ++ +S G T LH+AA E HT + +LL A+ +K
Sbjct: 469 CASRMGHNEMVKLLLEHKANSNSTTTAGHTPLHIAAREGHT-QTASILLDMNAQLTKMTK 527
Query: 127 DGXXXXXXXXXXXXXXMDVIW-----NPD---EYSVEDLVVILGQKNLTTVKLLSQK 175
G + V+ NP+ + + L V + NL V LL K
Sbjct: 528 KGFTPLHVAAKYGKVDVAVLLLERGANPNAAGKVGLTPLHVAVHHNNLDVVNLLLSK 584
Score = 54 (24.1 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 22/68 (32%), Positives = 30/68 (44%)
Query: 61 LRVSCIFDSVSCATSLVNGDLGPVALVNEVEESSGMTALHLAAESHTARC-VELLLKKRA 119
L VS ++ L+ P A +VE T LH+A S C VE LL+ A
Sbjct: 402 LHVSSFMGHLNIVKILMQKGASPNASNVKVE-----TPLHMA--SRAGHCEVEFLLQNAA 454
Query: 120 RTDIRSKD 127
D ++KD
Sbjct: 455 PVDAKAKD 462
Score = 53 (23.7 bits), Expect = 0.00023, Sum P(3) = 0.00023
Identities = 9/34 (26%), Positives = 19/34 (55%)
Query: 89 EVEESSGMTALHLAAESHTARCVELLLKKRARTD 122
+ + +G++ +H+AA+ C+ LL+ A D
Sbjct: 293 QAKTKNGLSPIHMAAQGDHLDCIRQLLQYNAEID 326
Score = 52 (23.4 bits), Expect = 0.00029, Sum P(3) = 0.00029
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 96 MTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
+T LH+AA R ++LL K A+ + R+ +G
Sbjct: 333 LTPLHVAAHCGHHRVAKVLLDKGAKPNTRALNG 365
Score = 51 (23.0 bits), Expect = 0.00037, Sum P(3) = 0.00037
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 86 LVNEVEESSGMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
+V E G TALH+AA + + V L+ A + +S+ G
Sbjct: 63 IVLETTTKKGNTALHIAALAGQEQVVTELVNYGANVNAQSQKG 105
Score = 51 (23.0 bits), Expect = 0.00037, Sum P(3) = 0.00037
Identities = 19/68 (27%), Positives = 29/68 (42%)
Query: 61 LRVSCIFDSVSCATSLVNGDLGPVALVNEVEESSGMTALHLAAESHTARCVELLLKKRAR 120
L V+ + V A L+ P A +V G+T LH+A + V LLL K
Sbjct: 533 LHVAAKYGKVDVAVLLLERGANPNA-AGKV----GLTPLHVAVHHNNLDVVNLLLSKGGS 587
Query: 121 TDIRSKDG 128
+++G
Sbjct: 588 PHSAARNG 595
Score = 48 (22.0 bits), Expect = 0.00072, Sum P(3) = 0.00072
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 94 SGMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
+G T LH+A++ + A LL+ A + S G
Sbjct: 594 NGYTPLHIASKQNQAEVASSLLQHGASANAESLQG 628
Score = 38 (18.4 bits), Expect = 9.7e-06, Sum P(3) = 9.7e-06
Identities = 12/39 (30%), Positives = 16/39 (41%)
Query: 824 LQLSKNGNPSSPVNSASDSNECDRNDSKSPQDLRSVSIS 862
+Q+ +GN S V S EC D RS+ S
Sbjct: 1595 VQVWPSGNSPSIVAVEDSSLECSNADDSEALQNRSLGHS 1633
>TAIR|locus:2115169 [details] [associations]
symbol:AT4G36960 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 eggNOG:COG0724 KO:K14411
HSSP:Q14103 UniGene:At.4642 UniGene:At.4643 EMBL:AY048286
EMBL:BT000573 IPI:IPI00527793 RefSeq:NP_001154290.1
RefSeq:NP_568011.1 ProteinModelPortal:Q94AC3 SMR:Q94AC3
IntAct:Q94AC3 PaxDb:Q94AC3 PRIDE:Q94AC3 EnsemblPlants:AT4G36960.1
EnsemblPlants:AT4G36960.2 GeneID:829850 KEGG:ath:AT4G36960
TAIR:At4g36960 HOGENOM:HOG000070627 InParanoid:Q94AC3 OMA:EITDLYM
PhylomeDB:Q94AC3 ProtClustDB:CLSN2689792 Genevestigator:Q94AC3
Uniprot:Q94AC3
Length = 379
Score = 137 (53.3 bits), Expect = 9.9e-06, P = 9.9e-06
Identities = 39/87 (44%), Positives = 48/87 (55%)
Query: 542 STQEFKSKIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKH 601
+T+ +KIFVG LP D L YF + FG I+DA + + K+S RGFGFVTF
Sbjct: 234 TTRGIGNKIFVGRLPQEASVDDLRDYFGR-FGHIQDAYIPK--DPKRSGHRGFGFVTFA- 289
Query: 602 EKSAAAAVQARFVTIMGKEVEIKSAVP 628
E A V R I G+EV I SA P
Sbjct: 290 ENGVADRVARRSHEICGQEVAIDSATP 316
Score = 124 (48.7 bits), Expect = 0.00026, P = 0.00026
Identities = 32/83 (38%), Positives = 48/83 (57%)
Query: 549 KIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKHEKSAAAA 608
K+ V G+P+ +DSD L Y K FG +ED V + ++ +S RGFG+VTF + A A
Sbjct: 4 KLVVLGIPWDIDSDGLKDYMSK-FGDLEDCIVMKDRSTGRS--RGFGYVTFASAEDAKNA 60
Query: 609 VQARFVTIMGKEV-EIKSAVPKE 630
++ +G + E+K A PKE
Sbjct: 61 LKGEH--FLGNRILEVKVATPKE 81
>RGD|1306679 [details] [associations]
symbol:Ankrd11 "ankyrin repeat domain 11" species:10116 "Rattus
norvegicus" [GO:0001701 "in utero embryonic development"
evidence=ISO] [GO:0001894 "tissue homeostasis" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0035264 "multicellular
organism growth" evidence=ISO] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=ISO] [GO:0048705 "skeletal system
morphogenesis" evidence=ISO] [GO:0060323 "head morphogenesis"
evidence=ISO] [GO:0060325 "face morphogenesis" evidence=ISO]
[GO:0060348 "bone development" evidence=ISO] InterPro:IPR002110
Pfam:PF00023 PROSITE:PS50088 SMART:SM00248 RGD:1306679
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GeneTree:ENSGT00550000074487 IPI:IPI00360573
ProteinModelPortal:D3ZSU6 Ensembl:ENSRNOT00000031389
UCSC:RGD:1306679 ArrayExpress:D3ZSU6 Uniprot:D3ZSU6
Length = 2630
Score = 142 (55.0 bits), Expect = 1.0e-05, Sum P(3) = 1.0e-05
Identities = 46/153 (30%), Positives = 70/153 (45%)
Query: 351 LLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLKTIMMETPLFFAVKND 410
L+ GA V+ ++ G TALH A G + L+ + +N K + +TPL A N
Sbjct: 187 LISEGADVNVKDFAGWTALHEACNRGYYDIAKQLLAAGAE-VNTKGLDDDTPLHDAANNG 245
Query: 411 HMVCAEVLLRWGANSEVLNLRRERPIDFAKSQDMRFLLKAANTCHTNLAFLNQEKQNASL 470
H ++LLR+G N + N + E P+ A S M LL T +T+ + +S
Sbjct: 246 HYKVVKLLLRYGGNPQQSNRKGETPLKVANSPTMVNLLLGKGT-YTS-------SEESST 297
Query: 471 ESDEDISGTCEALLSMVDDNSNTERICSGTKIE 503
ES E+ A S VD N+ G K++
Sbjct: 298 ESSEEEDAPSFAPSSSVDGNNTDSEFEKGLKLK 330
Score = 66 (28.3 bits), Expect = 1.0e-05, Sum P(3) = 1.0e-05
Identities = 23/100 (23%), Positives = 45/100 (45%)
Query: 796 VKAGPIGKNGSPNHMVLVPSPPKQK---WGALQLSKNGNPSSPVNSASDSNECDRNDSKS 852
V A S +++V PSPP+Q+ G + ++ +PS+ A D D +++
Sbjct: 2199 VLADDSAPEASISNLVPAPSPPEQQRPAGGGDEETEAEDPSAAPCCAPDGPTTD-GLAQA 2257
Query: 853 PQDLRSVSISSTIERKPTNEVPKGSSSQRDTSTSAISASK 892
P + + + +E P N P+ + + ++ A A K
Sbjct: 2258 PNSAEAACVVAAVEGPPGNIQPEATDPEPKPTSEAPKAPK 2297
Score = 45 (20.9 bits), Expect = 1.0e-05, Sum P(3) = 1.0e-05
Identities = 16/41 (39%), Positives = 22/41 (53%)
Query: 87 VNEVEESSGMTALHLAAESHTARCVELLLKKRARTDIRSKD 127
VN+ E G T LH AA AR ++ L+ + A D+ KD
Sbjct: 161 VNKRNER-GETRLHRAAIRGDARRIKELISEGA--DVNVKD 198
>UNIPROTKB|Q9XSY6 [details] [associations]
symbol:Q9XSY6 "HnRNP A/B related protein" species:9685
"Felis catus" [GO:0001837 "epithelial to mesenchymal transition"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=ISS] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0005737
GO:GO:0045893 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0001837 HOVERGEN:HBG002295 HSSP:Q14103 InterPro:IPR012956
Pfam:PF08143 EMBL:AF153444 ProteinModelPortal:Q9XSY6 Uniprot:Q9XSY6
Length = 279
Score = 134 (52.2 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 40/112 (35%), Positives = 58/112 (51%)
Query: 524 LGEEQHRK----MNPGMCMIHASTQEFKSKIFVGGLPFFLDSDSLGGYFEKHFGPIEDAR 579
L +++HR ++P M A ++ KIFVGGL + + YF + FG IE
Sbjct: 122 LDQKEHRLDGRVIDPKKAM--AMKKDPVKKIFVGGLNPEATEEKIREYFGE-FGEIEAIE 178
Query: 580 VAEFQTEKQSVSRGFGFVTFKHEKSAAAAVQARFVTIMGKEVEIKSAVPKEV 631
+ K + RGF F+TFK E+ ++ +F TI G + EIK A PKEV
Sbjct: 179 LP--MDPKTNKRRGFVFITFKEEEPVKKVLEKKFHTISGSKCEIKVAQPKEV 228
>ZFIN|ZDB-GENE-050320-86 [details] [associations]
symbol:msi1 "musashi homolog 1 (Drosophila)"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0007417 "central
nervous system development" evidence=IMP] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
ZFIN:ZDB-GENE-050320-86 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0007417 GO:GO:0003676 EMBL:AB698464 Uniprot:J4C3V8
Length = 349
Score = 136 (52.9 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 34/84 (40%), Positives = 47/84 (55%)
Query: 549 KIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKHEKSAAAA 608
KIFVGGL + + YF++ FG ++DA + +T + RGFGFVTF++E
Sbjct: 110 KIFVGGLSVNTTIEDVKQYFDQ-FGKVDDAMLMFDKTTNRH--RGFGFVTFENEDVVEKV 166
Query: 609 VQARFVTIMGKEVEIKSAVPKEVL 632
+ F I K VE K A PKEV+
Sbjct: 167 CEIHFHEINNKMVECKKAQPKEVM 190
>UNIPROTKB|F1NSZ7 [details] [associations]
symbol:MSI1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00700000104255 EMBL:AADN02043198 EMBL:AADN02043199
EMBL:AADN02043200 EMBL:AADN02043201 IPI:IPI00576372
Ensembl:ENSGALT00000008924 ArrayExpress:F1NSZ7 Uniprot:F1NSZ7
Length = 262
Score = 133 (51.9 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 35/84 (41%), Positives = 46/84 (54%)
Query: 549 KIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKHEKSAAAA 608
KIFVGGL + + YFE+ FG + +++ F EK+S R FGFVTF+ E
Sbjct: 21 KIFVGGLSVNTTVEDVKQYFEQ-FGKVT-SKILGFDREKKSF-RWFGFVTFESEDIVEKV 77
Query: 609 VQARFVTIMGKEVEIKSAVPKEVL 632
+ F I K VE K A PKEV+
Sbjct: 78 CEIHFHEINNKMVECKKAQPKEVM 101
>UNIPROTKB|F1SG49 [details] [associations]
symbol:RIPK4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0002009 "morphogenesis of an epithelium"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004674
"protein serine/threonine kinase activity" evidence=IEA]
InterPro:IPR002110 InterPro:IPR000719 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00069 PRINTS:PR01415
PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011 PROSITE:PS50088
SMART:SM00248 GO:GO:0005524 GO:GO:0005634 GO:GO:0002009
GO:GO:0005737 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
GeneTree:ENSGT00550000074536 OMA:DLRFRII KO:K08848 EMBL:CU928443
RefSeq:XP_003132829.1 UniGene:Ssc.79691 Ensembl:ENSSSCT00000013217
GeneID:100518276 KEGG:ssc:100518276 Uniprot:F1SG49
Length = 789
Score = 119 (46.9 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 45/159 (28%), Positives = 68/159 (42%)
Query: 282 SCTDKKVGPPLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKTSMGLSQH 341
+ TD+ L A Q GDE +LL+ G + +H A QH
Sbjct: 503 NATDEDQWTALHFAAQNGDEGSTRLLLEKNASVHEADCE---GRTPMHVAC-------QH 552
Query: 342 ILQNRIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDC-INLKTIMME 400
Q +V ILL+ G V K LH AA G+ ++ L+ K+P +N +T+
Sbjct: 553 G-QEGVVRILLRRGVDVGLPGKDAWAPLHYAAWQGHLPIVK-LLAKQPGVSVNAQTLDGR 610
Query: 401 TPLFFAVKNDHMVCAEVLLRWGANSEVLNLRRERPIDFA 439
TPL A + H A VL+ ++ + NL + P+ A
Sbjct: 611 TPLHLAAQRGHYRVARVLIDLHSDVNMCNLLAQTPLHVA 649
Score = 108 (43.1 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 43/139 (30%), Positives = 63/139 (45%)
Query: 291 PLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKTSMGLSQHILQNRIVGI 350
P+ +A Q G E V+ ILL+ + LH A G H+ IV +
Sbjct: 545 PMHVACQHGQEGVVRILLRRGVDVGLPGKDAW---APLHYA--AWQG---HL---PIVKL 593
Query: 351 LLKH-GAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLKTIMMETPLFFAVKN 409
L K G V+ Q G T LH+AA G+ + LI D +N+ ++ +TPL A +
Sbjct: 594 LAKQPGVSVNAQTLDGRTPLHLAAQRGHYRVARVLIDLHSD-VNMCNLLAQTPLHVAAET 652
Query: 410 DHMVCAEVLLRWGANSEVL 428
H A +LL GA+ E +
Sbjct: 653 GHTSTARLLLHRGAHREAV 671
Score = 103 (41.3 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 39/141 (27%), Positives = 63/141 (44%)
Query: 291 PLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKTSMGLSQHILQNRIVGI 350
PL +A + G +LL G +ALH A + S H+ V +
Sbjct: 645 PLHVAAETGHTSTARLLLHR---GAHREAVTAEGCTALHLASR-----SGHLAT---VKL 693
Query: 351 LLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLKTIMMETPLFFAVKND 410
LL+ A + + TALH+AA G+S+ +E+L+ D ++L + L A +
Sbjct: 694 LLEEKADLLARGPRSQTALHLAAAGGHSEVVEELVCA--DVLDLSDEQGLSALHLAAQGR 751
Query: 411 HMVCAEVLLRWGANSEVLNLR 431
H E LLR GA+ + +L+
Sbjct: 752 HTKTVETLLRHGAHVNLQSLK 772
Score = 72 (30.4 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 26/119 (21%), Positives = 50/119 (42%)
Query: 9 TAAPSVTDLETTLIINSLLEDDKKQLINVSKRHFIDNSLDNADQQTAIVTKLLRVSCIFD 68
T+ +D++ ++++++ D +L+ + + +D LD LL ++
Sbjct: 402 TSELGTSDVQKRKLVDAIVNGDTSRLMKILQPQDVDLVLDGG-------ASLLHLAVEAG 454
Query: 69 SVSCATSLVNGDLGPVALVNEVEESSGMTALHLAAESHTARCVELLLKKRARTDIRSKD 127
C L+ + P L N G T LH+A E VELLL ++ + +D
Sbjct: 455 QEDCVKWLLLNNANP-NLTNR----KGSTPLHVAVEKRVRGVVELLLARKISVNATDED 508
Score = 63 (27.2 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 16/59 (27%), Positives = 30/59 (50%)
Query: 75 SLVNGDLGPVALVNEVEE-----SSGMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
++VNGD + + + ++ G + LHLA E+ CV+ LL A ++ ++ G
Sbjct: 418 AIVNGDTSRLMKILQPQDVDLVLDGGASLLHLAVEAGQEDCVKWLLLNNANPNLTNRKG 476
>MGI|MGI:88024 [details] [associations]
symbol:Ank1 "ankyrin 1, erythroid" species:10090 "Mus
musculus" [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=ISO] [GO:0006779
"porphyrin-containing compound biosynthetic process" evidence=IMP]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=ISO]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0008093
"cytoskeletal adaptor activity" evidence=ISO] [GO:0010638 "positive
regulation of organelle organization" evidence=ISO] [GO:0014731
"spectrin-associated cytoskeleton" evidence=ISO;IMP] [GO:0015672
"monovalent inorganic cation transport" evidence=IMP] [GO:0016020
"membrane" evidence=IDA] [GO:0016529 "sarcoplasmic reticulum"
evidence=ISO] [GO:0019899 "enzyme binding" evidence=ISO]
[GO:0030018 "Z disc" evidence=ISO] [GO:0030507 "spectrin binding"
evidence=ISO] [GO:0030673 "axolemma" evidence=ISO] [GO:0030863
"cortical cytoskeleton" evidence=IDA] [GO:0031430 "M band"
evidence=ISO] [GO:0031672 "A band" evidence=ISO] [GO:0042383
"sarcolemma" evidence=ISO] [GO:0043005 "neuron projection"
evidence=ISO] [GO:0045211 "postsynaptic membrane" evidence=ISO]
[GO:0048821 "erythrocyte development" evidence=IMP] [GO:0051117
"ATPase binding" evidence=ISO] [GO:0072661 "protein targeting to
plasma membrane" evidence=ISO] InterPro:IPR000488 Pfam:PF00531
InterPro:IPR002110 Pfam:PF00023 PRINTS:PR01415 PROSITE:PS50017
PROSITE:PS50088 SMART:SM00005 SMART:SM00248 MGI:MGI:88024
GO:GO:0005886 GO:GO:0007165 GO:GO:0016020 GO:GO:0030863
GO:GO:0014731 eggNOG:COG0666 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0006779
GO:GO:0006888 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
GO:GO:0016529 CTD:286 HOVERGEN:HBG004234 KO:K10380 GO:GO:0048821
GO:GO:0015672 GO:GO:0072661 InterPro:IPR000906 Pfam:PF00791
SMART:SM00218 PROSITE:PS51145 EMBL:M84756 EMBL:X69063 EMBL:X69064
EMBL:U73972 EMBL:AK134267 EMBL:AK147278 EMBL:AK147597 EMBL:AK158131
EMBL:BC061219 EMBL:U76758 IPI:IPI00109307 IPI:IPI00119871
IPI:IPI00474771 IPI:IPI00755019 IPI:IPI00755395 IPI:IPI00755993
IPI:IPI00757184 IPI:IPI00874807 PIR:I49502 PIR:S37771 PIR:S37772
RefSeq:NP_001104253.1 RefSeq:NP_112435.2 UniGene:Mm.334444
ProteinModelPortal:Q02357 SMR:Q02357 MINT:MINT-255055 STRING:Q02357
PhosphoSite:Q02357 PaxDb:Q02357 PRIDE:Q02357
Ensembl:ENSMUST00000033947 Ensembl:ENSMUST00000110688
Ensembl:ENSMUST00000121075 Ensembl:ENSMUST00000121802 GeneID:11733
KEGG:mmu:11733 UCSC:uc009lee.2 UCSC:uc009lef.2 UCSC:uc009leg.1
UCSC:uc009lei.1 UCSC:uc009lel.1 UCSC:uc009lem.1
GeneTree:ENSGT00700000104348 NextBio:279431 Bgee:Q02357
CleanEx:MM_ANK1 Genevestigator:Q02357 GermOnline:ENSMUSG00000031543
Uniprot:Q02357
Length = 1862
Score = 141 (54.7 bits), Expect = 1.4e-05, Sum P(3) = 1.4e-05
Identities = 45/166 (27%), Positives = 77/166 (46%)
Query: 275 FGAVANGSCTDKKVGPPLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKT 334
+G AN PL LA Q G +++ +LL + G + LH L +
Sbjct: 620 YGGSANAESVQGVT--PLHLAAQEGHTEMVALLLSKQANGNLGNKS---GLTPLH--LVS 672
Query: 335 SMGLSQHILQNRIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINL 394
G H+ + +L+KHG V ++G T LH+A+ GN + ++ L++ + D +N
Sbjct: 673 QEG---HV---PVADVLIKHGVTVDATTRMGYTPLHVASHYGNIKLVKFLLQHQAD-VNA 725
Query: 395 KTIMMETPLFFAVKNDHMVCAEVLLRWGANSEVLNLRRERPIDFAK 440
KT + +PL A + H +LL+ GA+ ++ P+ AK
Sbjct: 726 KTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSNGTTPLAIAK 771
Score = 68 (29.0 bits), Expect = 1.4e-05, Sum P(3) = 1.4e-05
Identities = 20/67 (29%), Positives = 37/67 (55%)
Query: 61 LRVSCIFDSVSCATSLVNGDLGPVALVNEVEESSGMTALHLAAESHTARCVELLLKKRAR 120
L ++ +++++ A L+N A VN ++ G+T LH+A+ V LLL + A+
Sbjct: 206 LHIAAHYENLNVAQLLLNRG----ASVNFTPQN-GITPLHIASRRGNVIMVRLLLDRGAQ 260
Query: 121 TDIRSKD 127
+ R+KD
Sbjct: 261 IETRTKD 267
Score = 64 (27.6 bits), Expect = 3.5e-05, Sum P(3) = 3.5e-05
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 94 SGMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
+G T LH+A + + R +ELLLK A D ++ G
Sbjct: 366 NGFTPLHIACKKNHIRVMELLLKTGASIDAVTESG 400
Score = 62 (26.9 bits), Expect = 5.5e-05, Sum P(3) = 5.5e-05
Identities = 18/68 (26%), Positives = 29/68 (42%)
Query: 61 LRVSCIFDSVSCATSLVNGDLGPVALVNEVEESSGMTALHLAAESHTARCVELLLKKRAR 120
L ++ D A L+ D P +V +G T LH+AA +LLL + A
Sbjct: 173 LHIAARNDDTRTAAVLLQNDPNP-----DVLSKTGFTPLHIAAHYENLNVAQLLLNRGAS 227
Query: 121 TDIRSKDG 128
+ ++G
Sbjct: 228 VNFTPQNG 235
Score = 61 (26.5 bits), Expect = 6.9e-05, Sum P(3) = 6.9e-05
Identities = 14/44 (31%), Positives = 25/44 (56%)
Query: 85 ALVNEVEESSGMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
A VN + G T L++AA+ + V+ LL+ A ++ ++DG
Sbjct: 98 ANVN-AQSQKGFTPLYMAAQENHLEVVKFLLENGANQNVATEDG 140
Score = 60 (26.2 bits), Expect = 8.6e-05, Sum P(3) = 8.6e-05
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 95 GMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
G T LH+AA+ R ELLL+ A + K+G
Sbjct: 532 GFTPLHVAAKYGKVRLAELLLEHDAHPNAAGKNG 565
Score = 60 (26.2 bits), Expect = 8.6e-05, Sum P(3) = 8.6e-05
Identities = 11/34 (32%), Positives = 20/34 (58%)
Query: 89 EVEESSGMTALHLAAESHTARCVELLLKKRARTD 122
+ + +G++ +H+AA+ CV LLL+ A D
Sbjct: 295 QAKTKNGLSPIHMAAQGDHLDCVRLLLQYNAEID 328
Score = 59 (25.8 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 19/58 (32%), Positives = 28/58 (48%)
Query: 73 ATSLVNGDLGPVA-LVNEVEESS-GMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
A +L G VA L+N + + ALH+AA + R +LL+ D+ SK G
Sbjct: 145 AVALQQGHENVVAHLINYGTKGKVRLPALHIAARNDDTRTAAVLLQNDPNPDVLSKTG 202
Score = 53 (23.7 bits), Expect = 0.00042, Sum P(3) = 0.00042
Identities = 10/31 (32%), Positives = 19/31 (61%)
Query: 97 TALHLAAESHTARCVELLLKKRARTDIRSKD 127
T LH+AA + + LL+ +A+ + ++KD
Sbjct: 435 TPLHMAARAGHTEVAKYLLQNKAKANAKAKD 465
Score = 52 (23.4 bits), Expect = 0.00053, Sum P(3) = 0.00053
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 89 EVEESSGMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
E +T LH AA + R E+LL A ++K+G
Sbjct: 262 ETRTKDELTPLHCAARNGHVRISEILLDHGAPIQAKTKNG 301
Score = 51 (23.0 bits), Expect = 0.00066, Sum P(3) = 0.00066
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 94 SGMTALHLAA-ESHTARCVELLLKK 117
+G+ LHLA+ E H VELL K+
Sbjct: 40 NGLNGLHLASKEGHVKMVVELLHKE 64
Score = 51 (23.0 bits), Expect = 0.00066, Sum P(3) = 0.00066
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 96 MTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
+T LH+AA R ++LL K A+ + R+ +G
Sbjct: 335 LTPLHVAAHCGHHRVAKVLLDKGAKPNSRALNG 367
Score = 38 (18.4 bits), Expect = 1.4e-05, Sum P(3) = 1.4e-05
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 608 AVQARFVTIMGKEVEIKSAVPKEVLFAEL 636
A F T++ KE+ + K V+FA++
Sbjct: 1216 AEAVHFATLLYKELTAVPYMAKFVIFAKM 1244
>UNIPROTKB|H9KYW8 [details] [associations]
symbol:H9KYW8 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0042803
"protein homodimerization activity" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] InterPro:IPR002110
Pfam:PF13606 PRINTS:PR01415 PROSITE:PS50088 SMART:SM00248
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GeneTree:ENSGT00660000095543 EMBL:AADN02010486
Ensembl:ENSGALT00000001145 OMA:EVNEREA Uniprot:H9KYW8
Length = 344
Score = 134 (52.2 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 42/152 (27%), Positives = 73/152 (48%)
Query: 288 VGPPLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKTSMGLSQHILQNRI 347
+G L+ A + G++D + L+ S G S LH A +QH +
Sbjct: 6 LGKQLLEAARRGEDDEVRTLMAS----GAPFTTDWLGTSPLHLA-------AQHGHYST- 53
Query: 348 VGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLKTIMMETPLFFAV 407
+LL+ G + K+ T LH+AA G++ ++ LIR D +N K ++ T L +A
Sbjct: 54 AEVLLRAGVSRDARTKVDRTPLHMAAADGHAHVVDLLIRNGAD-VNAKDMLKMTALHWAA 112
Query: 408 KNDHMVCAEVLLRWGANSEVLNLRRERPIDFA 439
+++H E+L+R+GA+ + + P D A
Sbjct: 113 EHNHRDVVELLVRYGADVHAFSKFDKSPFDIA 144
>UNIPROTKB|D6R9P3 [details] [associations]
symbol:HNRNPAB "Heterogeneous nuclear ribonucleoprotein
A/B" species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 HOGENOM:HOG000234441
InterPro:IPR012956 Pfam:PF08143 EMBL:AC136632 HGNC:HGNC:5034
ChiTaRS:HNRNPAB IPI:IPI00964686 ProteinModelPortal:D6R9P3
SMR:D6R9P3 Ensembl:ENST00000515193 ArrayExpress:D6R9P3 Bgee:D6R9P3
Uniprot:D6R9P3
Length = 280
Score = 132 (51.5 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 39/112 (34%), Positives = 58/112 (51%)
Query: 524 LGEEQHRK----MNPGMCMIHASTQEFKSKIFVGGLPFFLDSDSLGGYFEKHFGPIEDAR 579
L +++HR ++P M A ++ KIFVGGL + + YF + FG IE
Sbjct: 128 LDQKEHRLDGRVIDPKKAM--AMKKDPVKKIFVGGLNPEATEEKIREYFGE-FGEIEAIE 184
Query: 580 VAEFQTEKQSVSRGFGFVTFKHEKSAAAAVQARFVTIMGKEVEIKSAVPKEV 631
+ K + RGF F+TFK E+ ++ +F T+ G + EIK A PKEV
Sbjct: 185 LP--MDPKLNKRRGFVFITFKEEEPVKKVLEKKFHTVSGSKCEIKVAQPKEV 234
>RGD|1309620 [details] [associations]
symbol:Ank1 "ankyrin 1, erythrocytic" species:10116 "Rattus
norvegicus" [GO:0005515 "protein binding" evidence=IPI] [GO:0005634
"nucleus" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=ISO;IDA] [GO:0006779 "porphyrin-containing compound
biosynthetic process" evidence=ISO] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=ISO] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0008093 "cytoskeletal adaptor
activity" evidence=ISO] [GO:0010638 "positive regulation of
organelle organization" evidence=IMP] [GO:0014731
"spectrin-associated cytoskeleton" evidence=ISO] [GO:0015672
"monovalent inorganic cation transport" evidence=ISO] [GO:0016020
"membrane" evidence=ISO] [GO:0016529 "sarcoplasmic reticulum"
evidence=IDA] [GO:0019899 "enzyme binding" evidence=ISO]
[GO:0030018 "Z disc" evidence=IDA] [GO:0030507 "spectrin binding"
evidence=ISO] [GO:0030673 "axolemma" evidence=IDA] [GO:0030863
"cortical cytoskeleton" evidence=ISO] [GO:0031430 "M band"
evidence=IDA] [GO:0031672 "A band" evidence=IDA] [GO:0042383
"sarcolemma" evidence=IDA] [GO:0043005 "neuron projection"
evidence=IDA] [GO:0045211 "postsynaptic membrane" evidence=IDA]
[GO:0048821 "erythrocyte development" evidence=ISO] [GO:0051117
"ATPase binding" evidence=ISO] [GO:0072661 "protein targeting to
plasma membrane" evidence=ISO] InterPro:IPR000488
InterPro:IPR002110 Pfam:PF00023 PRINTS:PR01415 PROSITE:PS50017
PROSITE:PS50088 SMART:SM00248 RGD:1309620 GO:GO:0005634
GO:GO:0007165 GO:GO:0031430 GO:GO:0030018 GO:GO:0045211
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0030673 GO:GO:0042383 Gene3D:1.10.533.10
InterPro:IPR011029 GO:GO:0016529 InterPro:IPR000906 Pfam:PF00791
SMART:SM00218 PROSITE:PS51145 GO:GO:0010638 IPI:IPI00358369
Ensembl:ENSRNOT00000024862 UCSC:RGD:1309620 ArrayExpress:F1MA94
Uniprot:F1MA94
Length = 1864
Score = 140 (54.3 bits), Expect = 1.8e-05, Sum P(3) = 1.8e-05
Identities = 45/166 (27%), Positives = 76/166 (45%)
Query: 275 FGAVANGSCTDKKVGPPLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKT 334
+G AN PL LA Q G +++ +LL + G + LH L
Sbjct: 620 YGGSANAESVQGVT--PLHLAAQEGHTEMVALLLSKQANGNLGNKS---GLTPLH--LVA 672
Query: 335 SMGLSQHILQNRIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINL 394
G H+ + +L+KHG V ++G T LH+A+ GN + ++ L++ + D +N
Sbjct: 673 QEG---HV---PVADVLIKHGVTVDATTRMGYTPLHVASHYGNIKLVKFLLQHQAD-VNA 725
Query: 395 KTIMMETPLFFAVKNDHMVCAEVLLRWGANSEVLNLRRERPIDFAK 440
KT + +PL A + H +LL+ GA+ ++ P+ AK
Sbjct: 726 KTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSNGTTPLAIAK 771
Score = 68 (29.0 bits), Expect = 1.8e-05, Sum P(3) = 1.8e-05
Identities = 20/67 (29%), Positives = 37/67 (55%)
Query: 61 LRVSCIFDSVSCATSLVNGDLGPVALVNEVEESSGMTALHLAAESHTARCVELLLKKRAR 120
L ++ +++++ A L+N A VN ++ G+T LH+A+ V LLL + A+
Sbjct: 206 LHIAAHYENLNVAQLLLNRG----ASVNFTPQN-GITPLHIASRRGNVIMVRLLLDRGAQ 260
Query: 121 TDIRSKD 127
+ R+KD
Sbjct: 261 IETRTKD 267
Score = 64 (27.6 bits), Expect = 0.00020, Sum P(4) = 0.00020
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 94 SGMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
+G T LH+A + + R +ELLLK A D ++ G
Sbjct: 366 NGFTPLHIACKKNHIRVMELLLKTGASIDAVTESG 400
Score = 62 (26.9 bits), Expect = 0.00030, Sum P(4) = 0.00030
Identities = 18/68 (26%), Positives = 29/68 (42%)
Query: 61 LRVSCIFDSVSCATSLVNGDLGPVALVNEVEESSGMTALHLAAESHTARCVELLLKKRAR 120
L ++ D A L+ D P +V +G T LH+AA +LLL + A
Sbjct: 173 LHIAARNDDTRTAAVLLQNDPNP-----DVLSKTGFTPLHIAAHYENLNVAQLLLNRGAS 227
Query: 121 TDIRSKDG 128
+ ++G
Sbjct: 228 VNFTPQNG 235
Score = 61 (26.5 bits), Expect = 0.00038, Sum P(4) = 0.00038
Identities = 14/44 (31%), Positives = 25/44 (56%)
Query: 85 ALVNEVEESSGMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
A VN + G T L++AA+ + V+ LL+ A ++ ++DG
Sbjct: 98 ANVN-AQSQKGFTPLYMAAQENHLEVVKFLLENGANQNVATEDG 140
Score = 60 (26.2 bits), Expect = 0.00047, Sum P(4) = 0.00047
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 95 GMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
G T LH+AA+ R ELLL+ A + K+G
Sbjct: 532 GFTPLHVAAKYGKVRLAELLLEHDAHPNAAGKNG 565
Score = 60 (26.2 bits), Expect = 0.00047, Sum P(4) = 0.00047
Identities = 11/34 (32%), Positives = 20/34 (58%)
Query: 89 EVEESSGMTALHLAAESHTARCVELLLKKRARTD 122
+ + +G++ +H+AA+ CV LLL+ A D
Sbjct: 295 QAKTKNGLSPIHMAAQGDHLDCVRLLLQYNAEID 328
Score = 59 (25.8 bits), Expect = 0.00058, Sum P(4) = 0.00058
Identities = 19/58 (32%), Positives = 28/58 (48%)
Query: 73 ATSLVNGDLGPVA-LVNEVEESS-GMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
A +L G VA L+N + + ALH+AA + R +LL+ D+ SK G
Sbjct: 145 AVALQQGHENVVAHLINYGTKGKVRLPALHIAARNDDTRTAAVLLQNDPNPDVLSKTG 202
Score = 38 (18.4 bits), Expect = 1.8e-05, Sum P(3) = 1.8e-05
Identities = 14/43 (32%), Positives = 23/43 (53%)
Query: 456 TN-LA-FLNQEKQNASLESDEDISGTCEALLSMVDDNSNTERI 496
TN LA L QE+ S + +++SGT + + V S +R+
Sbjct: 1627 TNGLADLLGQEEGQRSEKKSQEVSGTEQDTETEVSLVSGQQRV 1669
Score = 38 (18.4 bits), Expect = 8.1e-05, Sum P(4) = 8.1e-05
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 608 AVQARFVTIMGKEVEIKSAVPKEVLFAEL 636
A F T++ KE+ + K V+FA++
Sbjct: 1216 AEAVHFATLLYKELTAVPYMAKFVIFAKM 1244
Score = 38 (18.4 bits), Expect = 8.1e-05, Sum P(4) = 8.1e-05
Identities = 19/81 (23%), Positives = 33/81 (40%)
Query: 779 GYSKLSDFLRTLPDLCHVKAGPIGKNGSPNHMVLVPSPPKQ--------KWGALQLSKNG 830
GYS L D L + L + P+ + N + ++ + P + +Q+ +G
Sbjct: 1510 GYSSLQDELLSPASLHYALPSPLCADQYWNEVAVIDAIPLAATEHDTMLEMSDMQVWSSG 1569
Query: 831 NPSSPVNSASDSNECDR-NDS 850
S V + S EC + DS
Sbjct: 1570 LTPSLVTAEDSSLECSKAEDS 1590
>UNIPROTKB|D6RD18 [details] [associations]
symbol:HNRNPAB "Heterogeneous nuclear ribonucleoprotein
A/B" species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 HOGENOM:HOG000234441
InterPro:IPR012956 Pfam:PF08143 EMBL:AC136632 HGNC:HGNC:5034
ChiTaRS:HNRNPAB IPI:IPI00966854 ProteinModelPortal:D6RD18
SMR:D6RD18 Ensembl:ENST00000514633 ArrayExpress:D6RD18 Bgee:D6RD18
Uniprot:D6RD18
Length = 283
Score = 132 (51.5 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 39/112 (34%), Positives = 58/112 (51%)
Query: 524 LGEEQHRK----MNPGMCMIHASTQEFKSKIFVGGLPFFLDSDSLGGYFEKHFGPIEDAR 579
L +++HR ++P M A ++ KIFVGGL + + YF + FG IE
Sbjct: 128 LDQKEHRLDGRVIDPKKAM--AMKKDPVKKIFVGGLNPEATEEKIREYFGE-FGEIEAIE 184
Query: 580 VAEFQTEKQSVSRGFGFVTFKHEKSAAAAVQARFVTIMGKEVEIKSAVPKEV 631
+ K + RGF F+TFK E+ ++ +F T+ G + EIK A PKEV
Sbjct: 185 LP--MDPKLNKRRGFVFITFKEEEPVKKVLEKKFHTVSGSKCEIKVAQPKEV 234
>UNIPROTKB|F1M3K5 [details] [associations]
symbol:Ank1 "Protein Ank1" species:10116 "Rattus
norvegicus" [GO:0007165 "signal transduction" evidence=IEA]
InterPro:IPR000488 InterPro:IPR002110 Pfam:PF00023 PRINTS:PR01415
PROSITE:PS50017 PROSITE:PS50088 SMART:SM00248 RGD:1309620
GO:GO:0007165 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 Gene3D:1.10.533.10
InterPro:IPR011029 InterPro:IPR000906 Pfam:PF00791 SMART:SM00218
PROSITE:PS51145 IPI:IPI00950774 Ensembl:ENSRNOT00000066751
ArrayExpress:F1M3K5 Uniprot:F1M3K5
Length = 1881
Score = 140 (54.3 bits), Expect = 1.8e-05, Sum P(3) = 1.8e-05
Identities = 45/166 (27%), Positives = 76/166 (45%)
Query: 275 FGAVANGSCTDKKVGPPLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKT 334
+G AN PL LA Q G +++ +LL + G + LH L
Sbjct: 630 YGGSANAESVQGVT--PLHLAAQEGHTEMVALLLSKQANGNLGNKS---GLTPLH--LVA 682
Query: 335 SMGLSQHILQNRIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINL 394
G H+ + +L+KHG V ++G T LH+A+ GN + ++ L++ + D +N
Sbjct: 683 QEG---HV---PVADVLIKHGVTVDATTRMGYTPLHVASHYGNIKLVKFLLQHQAD-VNA 735
Query: 395 KTIMMETPLFFAVKNDHMVCAEVLLRWGANSEVLNLRRERPIDFAK 440
KT + +PL A + H +LL+ GA+ ++ P+ AK
Sbjct: 736 KTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSNGTTPLAIAK 781
Score = 68 (29.0 bits), Expect = 1.8e-05, Sum P(3) = 1.8e-05
Identities = 20/67 (29%), Positives = 37/67 (55%)
Query: 61 LRVSCIFDSVSCATSLVNGDLGPVALVNEVEESSGMTALHLAAESHTARCVELLLKKRAR 120
L ++ +++++ A L+N A VN ++ G+T LH+A+ V LLL + A+
Sbjct: 216 LHIAAHYENLNVAQLLLNRG----ASVNFTPQN-GITPLHIASRRGNVIMVRLLLDRGAQ 270
Query: 121 TDIRSKD 127
+ R+KD
Sbjct: 271 IETRTKD 277
Score = 64 (27.6 bits), Expect = 0.00036, Sum P(5) = 0.00036
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 94 SGMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
+G T LH+A + + R +ELLLK A D ++ G
Sbjct: 376 NGFTPLHIACKKNHIRVMELLLKTGASIDAVTESG 410
Score = 62 (26.9 bits), Expect = 0.00055, Sum P(5) = 0.00055
Identities = 18/68 (26%), Positives = 29/68 (42%)
Query: 61 LRVSCIFDSVSCATSLVNGDLGPVALVNEVEESSGMTALHLAAESHTARCVELLLKKRAR 120
L ++ D A L+ D P +V +G T LH+AA +LLL + A
Sbjct: 183 LHIAARNDDTRTAAVLLQNDPNP-----DVLSKTGFTPLHIAAHYENLNVAQLLLNRGAS 237
Query: 121 TDIRSKDG 128
+ ++G
Sbjct: 238 VNFTPQNG 245
Score = 61 (26.5 bits), Expect = 0.00068, Sum P(5) = 0.00068
Identities = 14/44 (31%), Positives = 25/44 (56%)
Query: 85 ALVNEVEESSGMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
A VN + G T L++AA+ + V+ LL+ A ++ ++DG
Sbjct: 108 ANVN-AQSQKGFTPLYMAAQENHLEVVKFLLENGANQNVATEDG 150
Score = 60 (26.2 bits), Expect = 0.00084, Sum P(5) = 0.00084
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 95 GMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
G T LH+AA+ R ELLL+ A + K+G
Sbjct: 542 GFTPLHVAAKYGKVRLAELLLEHDAHPNAAGKNG 575
Score = 60 (26.2 bits), Expect = 0.00084, Sum P(5) = 0.00084
Identities = 11/34 (32%), Positives = 20/34 (58%)
Query: 89 EVEESSGMTALHLAAESHTARCVELLLKKRARTD 122
+ + +G++ +H+AA+ CV LLL+ A D
Sbjct: 305 QAKTKNGLSPIHMAAQGDHLDCVRLLLQYNAEID 338
Score = 39 (18.8 bits), Expect = 0.00016, Sum P(5) = 0.00016
Identities = 15/58 (25%), Positives = 27/58 (46%)
Query: 462 NQEKQNASLESDEDISGTCEALLSMVDDNSNTERICSGTKIEVCKYYESHSGCIRGSK 519
+++++ AS E DED S + + DN + T V ++ G +RGS+
Sbjct: 888 SEDQEQASKEYDED-SLIPSSPATETSDNISPVASPVHTGFLVSFMVDARGGSMRGSR 944
Score = 38 (18.4 bits), Expect = 1.8e-05, Sum P(3) = 1.8e-05
Identities = 14/43 (32%), Positives = 23/43 (53%)
Query: 456 TN-LA-FLNQEKQNASLESDEDISGTCEALLSMVDDNSNTERI 496
TN LA L QE+ S + +++SGT + + V S +R+
Sbjct: 1645 TNGLADLLGQEEGQRSEKKSQEVSGTEQDTETEVSLVSGQQRV 1687
Score = 38 (18.4 bits), Expect = 0.00016, Sum P(5) = 0.00016
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 608 AVQARFVTIMGKEVEIKSAVPKEVLFAEL 636
A F T++ KE+ + K V+FA++
Sbjct: 1234 AEAVHFATLLYKELTAVPYMAKFVIFAKM 1262
Score = 38 (18.4 bits), Expect = 0.00016, Sum P(5) = 0.00016
Identities = 19/81 (23%), Positives = 33/81 (40%)
Query: 779 GYSKLSDFLRTLPDLCHVKAGPIGKNGSPNHMVLVPSPPKQ--------KWGALQLSKNG 830
GYS L D L + L + P+ + N + ++ + P + +Q+ +G
Sbjct: 1528 GYSSLQDELLSPASLHYALPSPLCADQYWNEVAVIDAIPLAATEHDTMLEMSDMQVWSSG 1587
Query: 831 NPSSPVNSASDSNECDR-NDS 850
S V + S EC + DS
Sbjct: 1588 LTPSLVTAEDSSLECSKAEDS 1608
>UNIPROTKB|F1S146 [details] [associations]
symbol:ANK2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2001259 "positive regulation of cation channel
activity" evidence=IEA] [GO:1901021 "positive regulation of calcium
ion transmembrane transporter activity" evidence=IEA] [GO:1901018
"positive regulation of potassium ion transmembrane transporter
activity" evidence=IEA] [GO:0086091 "regulation of heart rate by
cardiac conduction" evidence=IEA] [GO:0086015 "regulation of SA
node cell action potential" evidence=IEA] [GO:0086014 "regulation
of atrial cardiac muscle cell action potential" evidence=IEA]
[GO:0086005 "regulation of ventricular cardiac muscle cell action
potential" evidence=IEA] [GO:0072661 "protein targeting to plasma
membrane" evidence=IEA] [GO:0070972 "protein localization to
endoplasmic reticulum" evidence=IEA] [GO:0060307 "regulation of
ventricular cardiac muscle cell membrane repolarization"
evidence=IEA] [GO:0060048 "cardiac muscle contraction"
evidence=IEA] [GO:0051928 "positive regulation of calcium ion
transport" evidence=IEA] [GO:0051117 "ATPase binding" evidence=IEA]
[GO:0050821 "protein stabilization" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0044325 "ion
channel binding" evidence=IEA] [GO:0043268 "positive regulation of
potassium ion transport" evidence=IEA] [GO:0043034 "costamere"
evidence=IEA] [GO:0034394 "protein localization to cell surface"
evidence=IEA] [GO:0033292 "T-tubule organization" evidence=IEA]
[GO:0031430 "M band" evidence=IEA] [GO:0030674 "protein binding,
bridging" evidence=IEA] [GO:0030507 "spectrin binding"
evidence=IEA] [GO:0030315 "T-tubule" evidence=IEA] [GO:0030018 "Z
disc" evidence=IEA] [GO:0019901 "protein kinase binding"
evidence=IEA] [GO:0016323 "basolateral plasma membrane"
evidence=IEA] [GO:0015459 "potassium channel regulator activity"
evidence=IEA] [GO:0014704 "intercalated disc" evidence=IEA]
[GO:0010881 "regulation of cardiac muscle contraction by regulation
of the release of sequestered calcium ion" evidence=IEA]
[GO:0010628 "positive regulation of gene expression" evidence=IEA]
[GO:0006874 "cellular calcium ion homeostasis" evidence=IEA]
[GO:0005887 "integral to plasma membrane" evidence=IEA] [GO:0003283
"atrial septum development" evidence=IEA] InterPro:IPR000488
Pfam:PF00531 InterPro:IPR002110 Pfam:PF00023 PRINTS:PR01415
PROSITE:PS50017 PROSITE:PS50088 SMART:SM00005 SMART:SM00248
GO:GO:0005737 GO:GO:0005887 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0016323
GO:GO:0060048 GO:GO:0010628 Gene3D:1.10.533.10 InterPro:IPR011029
SUPFAM:SSF47986 GO:GO:0002027 GO:GO:0034394 InterPro:IPR000906
Pfam:PF00791 SMART:SM00218 PROSITE:PS51145
GeneTree:ENSGT00700000104348 GO:GO:0003283 GO:GO:0070972
GO:GO:0086014 GO:GO:0010881 GO:GO:0086005 GO:GO:0060307
GO:GO:0086070 OMA:IVSKQYT EMBL:CU582848 EMBL:CU914370 EMBL:FP312625
Ensembl:ENSSSCT00000009992 Uniprot:F1S146
Length = 3896
Score = 125 (49.1 bits), Expect = 1.8e-05, Sum P(3) = 1.8e-05
Identities = 49/166 (29%), Positives = 70/166 (42%)
Query: 275 FGAVANGSCTDKKVGPPLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKT 334
+GA N K+ PL LA+Q G D++ +LL G ++LH A
Sbjct: 629 YGAETN--IVTKQGVTPLHLASQEGHTDMVTLLLDK---GANIHMSTKSGLTSLHLA--- 680
Query: 335 SMGLSQHILQNRIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINL 394
+Q N + IL KHGA KLG T L +A GN + + L+++ + +N
Sbjct: 681 ----AQEDKVN-VADILTKHGADQDAHTKLGYTPLIVACHYGNVKMVNFLLKQGAN-VNA 734
Query: 395 KTIMMETPLFFAVKNDHMVCAEVLLRWGANSEVLNLRRERPIDFAK 440
KT TPL A + H VLL+ GA + AK
Sbjct: 735 KTKNGYTPLHQAAQQGHTHIINVLLQHGAKPNATTANGNTALAIAK 780
Score = 76 (31.8 bits), Expect = 1.8e-05, Sum P(3) = 1.8e-05
Identities = 25/86 (29%), Positives = 38/86 (44%)
Query: 47 LDNADQQTAIVTKLLRVSCIFDSVSCATSLV----NGDLGPVALVNEVEESSGMTALHLA 102
L+N D + + L ++ D A L+ N D+ +VN ES G T LH+A
Sbjct: 161 LEN-DTKGKVRLPALHIAARKDDTKSAALLLQNDHNADVQSKMMVNRTTES-GFTPLHIA 218
Query: 103 AESHTARCVELLLKKRARTDIRSKDG 128
A LLL + A D +++G
Sbjct: 219 AHYGNVNVATLLLNRGAAVDFTARNG 244
Score = 73 (30.8 bits), Expect = 0.00066, Sum P(4) = 0.00065
Identities = 20/68 (29%), Positives = 38/68 (55%)
Query: 61 LRVSCIFDSVSCATSLVNGDLGPVALVNEVEESSGMTALHLAAESHTARCVELLLKKRAR 120
L ++ + +V+ AT L+N A V + +G+T LH+A++ V+LLL + +
Sbjct: 215 LHIAAHYGNVNVATLLLNRG----AAV-DFTARNGITPLHVASKRGNTNMVKLLLDRGGQ 269
Query: 121 TDIRSKDG 128
D +++DG
Sbjct: 270 IDAKTRDG 277
Score = 55 (24.4 bits), Expect = 1.8e-05, Sum P(3) = 1.8e-05
Identities = 20/74 (27%), Positives = 32/74 (43%)
Query: 809 HMVLVPSPPKQKWGALQLSKNGNPSSPVNSASDSNECDRNDSKSPQDLRS-VSISSTIER 867
H + PS +K + S SPV+S+S + + + D S VS ++ ER
Sbjct: 1784 HPPVSPSSKTEKHSPVSPSAKTERHSPVSSSSKTEKHSPVSPSTKPDRHSPVSSATKTER 1843
Query: 868 KPTNEVPKGSSSQR 881
P P G + +R
Sbjct: 1844 HPPVS-PSGKTDKR 1856
Score = 46 (21.3 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 58/224 (25%), Positives = 86/224 (38%)
Query: 692 EEATAEKSWAGRLLYGQPKTSSNESQAYLVESFEEK------SMPKWLRTFKKWLPRFLK 745
EE E+ A +P S+ E +++ VES +EK M + +K F
Sbjct: 2021 EEGAGERGKALNHKTPEPVQSAPEEESHKVESPKEKLADEQGDMDLQISPDRKTSTDF-S 2079
Query: 746 DVYRHPLEG--KYA--LSSLKTDFKAVCGLELDHASLGYSKLS---DFLRT--LPDLCHV 796
DV + LE KY S +T+ KA L LD + D+++ LP L +
Sbjct: 2080 DVIKQELEDNDKYQEFCHSEETE-KAQ--LHLDQVLTSPFNTTFPLDYMKEEFLPALS-L 2135
Query: 797 KAGPI-GKNGSPNHMVLVPSPPKQKWGALQLSKNGNPSSPVNSASDSNECDRNDSKSPQD 855
++G + G + S H SP G+L G P + SP+
Sbjct: 2136 QSGALDGSSESLKHEGAAGSP----CGSLM---EGTPQISSEESYKHEGLAETPETSPES 2188
Query: 856 LRSVSISSTIER-KPTNEVPKGSSSQRDTSTSAISASKKVIDYS 898
L S S T E+ + T E K S S ++K V D S
Sbjct: 2189 L-SFSPKKTEEQTEETKETTKVESPPEIHSEKEDPSTKDVTDSS 2231
Score = 46 (21.3 bits), Expect = 0.00034, Sum P(4) = 0.00034
Identities = 20/61 (32%), Positives = 28/61 (45%)
Query: 837 NSASDSN-ECDRNDSKSPQDLRSVSISSTIERKPTNEVPKGSSSQRDTSTSAISASKKVI 895
+S+SD++ EC D P+ + SV S T E K SSS S ++ KK
Sbjct: 2565 SSSSDADVECSA-DLDEPKCMESVEDKSNAPVVVTAESRKASSSSE--SEPELTQLKKGA 2621
Query: 896 D 896
D
Sbjct: 2622 D 2622
Score = 45 (20.9 bits), Expect = 0.00018, Sum P(3) = 0.00018
Identities = 14/48 (29%), Positives = 27/48 (56%)
Query: 621 VEIKSAVPKEVLFAELQKQSAQQQESKHEHQARLGAKIPDERTMEQII 668
+E +SA P E L ++S Q+ E+K + +++ K P R +Q++
Sbjct: 3260 MECESA-PSEGFLPSLDEES-QEDETKPK--SKIPVKAPVPRVEQQLL 3303
Score = 44 (20.5 bits), Expect = 0.00034, Sum P(4) = 0.00034
Identities = 10/30 (33%), Positives = 19/30 (63%)
Query: 620 EVEIKSAVPKEVLFAELQKQSAQQQESKHE 649
E E+ V K +F EL++++ Q+++ K E
Sbjct: 2529 EEEMFKMVTKIKMFDELEQEAKQKRDYKKE 2558
Score = 42 (19.8 bits), Expect = 0.00081, Sum P(4) = 0.00081
Identities = 16/72 (22%), Positives = 26/72 (36%)
Query: 832 PSSPVNSASDSNECDRNDSKSPQDLRSVSIS---STIERKPTNEVPKGSSSQRDTSTSAI 888
P SP+ S+ DSN P + + T E +E +G S + +
Sbjct: 2635 PPSPLPSSIDSNSSPEEVQFQPIVSKQYTFKMNEDTQEDSGKSEEEEGCESHLPEDSHTV 2694
Query: 889 SASKKVIDYSTI 900
S S + Y +
Sbjct: 2695 STSGPEMSYDDV 2706
Score = 40 (19.1 bits), Expect = 0.00081, Sum P(4) = 0.00081
Identities = 26/91 (28%), Positives = 37/91 (40%)
Query: 749 RHPLEGKYALSSLKTDFKAVCGLELDHAS-LGYSKLSDFLRTLPDLCHVKAGPIGKNGSP 807
R+ LEG + SL++ F + L HAS L S + D +P H + + K
Sbjct: 866 RYSLEGGRS-DSLRS-FSSDRSHTLSHASYLRDSAMIDDTVVIPS--H-QVSALAKEAER 920
Query: 808 NHMVLVPSPPKQKWGALQLSKNGNPSSPVNS 838
N L WG L SSP++S
Sbjct: 921 NSYRL-------SWGTENLDNVALSSSPIHS 944
>UNIPROTKB|F1M651 [details] [associations]
symbol:Ank1 "Protein Ank1" species:10116 "Rattus
norvegicus" [GO:0007165 "signal transduction" evidence=IEA]
InterPro:IPR000488 InterPro:IPR002110 Pfam:PF00023 PRINTS:PR01415
PROSITE:PS50017 PROSITE:PS50088 SMART:SM00248 RGD:1309620
GO:GO:0007165 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 Gene3D:1.10.533.10
InterPro:IPR011029 InterPro:IPR000906 Pfam:PF00791 SMART:SM00218
PROSITE:PS51145 IPI:IPI00949059 Ensembl:ENSRNOT00000066965
ArrayExpress:F1M651 Uniprot:F1M651
Length = 1888
Score = 140 (54.3 bits), Expect = 1.9e-05, Sum P(3) = 1.9e-05
Identities = 45/166 (27%), Positives = 76/166 (45%)
Query: 275 FGAVANGSCTDKKVGPPLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKT 334
+G AN PL LA Q G +++ +LL + G + LH L
Sbjct: 620 YGGSANAESVQGVT--PLHLAAQEGHTEMVALLLSKQANGNLGNKS---GLTPLH--LVA 672
Query: 335 SMGLSQHILQNRIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINL 394
G H+ + +L+KHG V ++G T LH+A+ GN + ++ L++ + D +N
Sbjct: 673 QEG---HV---PVADVLIKHGVTVDATTRMGYTPLHVASHYGNIKLVKFLLQHQAD-VNA 725
Query: 395 KTIMMETPLFFAVKNDHMVCAEVLLRWGANSEVLNLRRERPIDFAK 440
KT + +PL A + H +LL+ GA+ ++ P+ AK
Sbjct: 726 KTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSNGTTPLAIAK 771
Score = 68 (29.0 bits), Expect = 1.9e-05, Sum P(3) = 1.9e-05
Identities = 20/67 (29%), Positives = 37/67 (55%)
Query: 61 LRVSCIFDSVSCATSLVNGDLGPVALVNEVEESSGMTALHLAAESHTARCVELLLKKRAR 120
L ++ +++++ A L+N A VN ++ G+T LH+A+ V LLL + A+
Sbjct: 206 LHIAAHYENLNVAQLLLNRG----ASVNFTPQN-GITPLHIASRRGNVIMVRLLLDRGAQ 260
Query: 121 TDIRSKD 127
+ R+KD
Sbjct: 261 IETRTKD 267
Score = 64 (27.6 bits), Expect = 0.00021, Sum P(4) = 0.00021
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 94 SGMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
+G T LH+A + + R +ELLLK A D ++ G
Sbjct: 366 NGFTPLHIACKKNHIRVMELLLKTGASIDAVTESG 400
Score = 62 (26.9 bits), Expect = 0.00032, Sum P(4) = 0.00032
Identities = 18/68 (26%), Positives = 29/68 (42%)
Query: 61 LRVSCIFDSVSCATSLVNGDLGPVALVNEVEESSGMTALHLAAESHTARCVELLLKKRAR 120
L ++ D A L+ D P +V +G T LH+AA +LLL + A
Sbjct: 173 LHIAARNDDTRTAAVLLQNDPNP-----DVLSKTGFTPLHIAAHYENLNVAQLLLNRGAS 227
Query: 121 TDIRSKDG 128
+ ++G
Sbjct: 228 VNFTPQNG 235
Score = 61 (26.5 bits), Expect = 0.00040, Sum P(4) = 0.00040
Identities = 14/44 (31%), Positives = 25/44 (56%)
Query: 85 ALVNEVEESSGMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
A VN + G T L++AA+ + V+ LL+ A ++ ++DG
Sbjct: 98 ANVN-AQSQKGFTPLYMAAQENHLEVVKFLLENGANQNVATEDG 140
Score = 60 (26.2 bits), Expect = 0.00049, Sum P(4) = 0.00049
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 95 GMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
G T LH+AA+ R ELLL+ A + K+G
Sbjct: 532 GFTPLHVAAKYGKVRLAELLLEHDAHPNAAGKNG 565
Score = 60 (26.2 bits), Expect = 0.00049, Sum P(4) = 0.00049
Identities = 11/34 (32%), Positives = 20/34 (58%)
Query: 89 EVEESSGMTALHLAAESHTARCVELLLKKRARTD 122
+ + +G++ +H+AA+ CV LLL+ A D
Sbjct: 295 QAKTKNGLSPIHMAAQGDHLDCVRLLLQYNAEID 328
Score = 59 (25.8 bits), Expect = 0.00061, Sum P(4) = 0.00061
Identities = 19/58 (32%), Positives = 28/58 (48%)
Query: 73 ATSLVNGDLGPVA-LVNEVEESS-GMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
A +L G VA L+N + + ALH+AA + R +LL+ D+ SK G
Sbjct: 145 AVALQQGHENVVAHLINYGTKGKVRLPALHIAARNDDTRTAAVLLQNDPNPDVLSKTG 202
Score = 38 (18.4 bits), Expect = 1.9e-05, Sum P(3) = 1.9e-05
Identities = 14/43 (32%), Positives = 23/43 (53%)
Query: 456 TN-LA-FLNQEKQNASLESDEDISGTCEALLSMVDDNSNTERI 496
TN LA L QE+ S + +++SGT + + V S +R+
Sbjct: 1627 TNGLADLLGQEEGQRSEKKSQEVSGTEQDTETEVSLVSGQQRV 1669
Score = 38 (18.4 bits), Expect = 8.5e-05, Sum P(4) = 8.5e-05
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 608 AVQARFVTIMGKEVEIKSAVPKEVLFAEL 636
A F T++ KE+ + K V+FA++
Sbjct: 1216 AEAVHFATLLYKELTAVPYMAKFVIFAKM 1244
Score = 38 (18.4 bits), Expect = 8.5e-05, Sum P(4) = 8.5e-05
Identities = 19/81 (23%), Positives = 33/81 (40%)
Query: 779 GYSKLSDFLRTLPDLCHVKAGPIGKNGSPNHMVLVPSPPKQ--------KWGALQLSKNG 830
GYS L D L + L + P+ + N + ++ + P + +Q+ +G
Sbjct: 1510 GYSSLQDELLSPASLHYALPSPLCADQYWNEVAVIDAIPLAATEHDTMLEMSDMQVWSSG 1569
Query: 831 NPSSPVNSASDSNECDR-NDS 850
S V + S EC + DS
Sbjct: 1570 LTPSLVTAEDSSLECSKAEDS 1590
>UNIPROTKB|F1P5I0 [details] [associations]
symbol:LOC100859627 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR021662
Pfam:PF11627 GeneTree:ENSGT00700000104376 EMBL:AADN02020007
EMBL:AADN02020008 EMBL:AADN02020009 EMBL:AADN02020010
EMBL:AADN02020011 EMBL:AADN02020012 EMBL:AADN02020013
IPI:IPI00971390 Ensembl:ENSGALT00000015053 Uniprot:F1P5I0
Length = 288
Score = 132 (51.5 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 35/82 (42%), Positives = 47/82 (57%)
Query: 549 KIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKHEKSAAAA 608
K+F+GGL F DSL +FEK +G + D V K+S RGFGFVT+ + AA
Sbjct: 10 KLFIGGLSFETTDDSLREHFEK-WGTLTDCVVMRDPQTKRS--RGFGFVTYSCVEEVDAA 66
Query: 609 VQARFVTIMGKEVEIKSAVPKE 630
+ AR + G+ VE K AV +E
Sbjct: 67 MSARPHKVDGRVVEPKRAVSRE 88
Score = 127 (49.8 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 37/96 (38%), Positives = 52/96 (54%)
Query: 549 KIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQS-VSRGFGFVTFKHEKSAAA 607
KIFVGG+ + +L YFEK +G IE V E ++QS RGF FVTF +
Sbjct: 101 KIFVGGIKEDTEEYNLREYFEK-YGKIETIEVME---DRQSGKKRGFAFVTFDDHDTVDK 156
Query: 608 AVQARFVTIMGKEVEIKSAVPKEVLFAELQKQSAQQ 643
V ++ TI G E+K A+ K+ E+Q S+Q+
Sbjct: 157 IVVQKYHTINGHNCEVKKALSKQ----EMQTASSQR 188
>UNIPROTKB|E7EQ52 [details] [associations]
symbol:TNKS "Tankyrase-1" species:9606 "Homo sapiens"
[GO:0003950 "NAD+ ADP-ribosyltransferase activity" evidence=IEA]
InterPro:IPR002110 InterPro:IPR001660 InterPro:IPR011510
InterPro:IPR012317 Pfam:PF00023 Pfam:PF00644 Pfam:PF07647
PRINTS:PR01415 PROSITE:PS50088 PROSITE:PS50105 PROSITE:PS51059
SMART:SM00248 SMART:SM00454 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 Gene3D:1.10.150.50
InterPro:IPR013761 SUPFAM:SSF47769 GO:GO:0003950 EMBL:AC103834
EMBL:AC103877 EMBL:AC104052 EMBL:AC021242 HGNC:HGNC:11941
ChiTaRS:TNKS IPI:IPI00982731 ProteinModelPortal:E7EQ52 SMR:E7EQ52
Ensembl:ENST00000518281 ArrayExpress:E7EQ52 Bgee:E7EQ52
Uniprot:E7EQ52
Length = 1090
Score = 138 (53.6 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 37/101 (36%), Positives = 56/101 (55%)
Query: 346 RIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLKTIMMETPLFF 405
RIV +LL+HGA V ++K GL LH A G+ + E L+ K C+N + TPL
Sbjct: 146 RIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEVTE-LLLKHGACVNAMDLWQFTPLHE 204
Query: 406 AV-KNDHMVCAEVLLRWGANSEVLNLRRERPIDFAKSQDMR 445
A KN VC+ +LL GA+ ++N + +D A + ++R
Sbjct: 205 AASKNRVEVCS-LLLSHGADPTLVNCHGKSAVDMAPTPELR 244
Score = 130 (50.8 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 38/99 (38%), Positives = 53/99 (53%)
Query: 351 LLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLKTIMMETPLFFAV-KN 409
LL+HGA V+ Q+K GL LH AA G+ + L+ K C+N TPL A K
Sbjct: 619 LLEHGADVNAQDKGGLIPLHNAASYGHVD-IAALLIKYNTCVNATDKWAFTPLHEAAQKG 677
Query: 410 DHMVCAEVLLRWGANSEVLNLRRERPIDFAKSQDMRFLL 448
+CA +LL GA+ + N + P+D A + D+R LL
Sbjct: 678 RTQLCA-LLLAHGADPTMKNQEGQTPLDLATADDIRALL 715
Score = 119 (46.9 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 30/106 (28%), Positives = 59/106 (55%)
Query: 326 SALHCALKTSMGLSQHILQNRIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLI 385
+ALHCA+ S H + ++ +LL+ GA V+++NK +T LH+AA ++ +E ++
Sbjct: 287 TALHCAVA-----SLHPKRKQVTELLLRKGANVNEKNKDFMTPLHVAAERAHNDVME-VL 340
Query: 386 RKEPDCINLKTIMMETPLFFAVKNDHMVCAEVLLRWGANSEVLNLR 431
K +N + +T L A H+ +LL +G++ +++L+
Sbjct: 341 HKHGAKMNALDTLGQTALHRAALAGHLQTCRLLLSYGSDPSIISLQ 386
Score = 115 (45.5 bits), Expect = 0.00077, Sum P(2) = 0.00076
Identities = 33/98 (33%), Positives = 49/98 (50%)
Query: 347 IVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLKTIMMETPLF-F 405
+V LL HGA V ++K GL LH A G+ + E L+R +N+ + TPL
Sbjct: 462 VVEYLLHHGADVHAKDKGGLVPLHNACSYGHYEVAELLVRHGAS-VNVADLWKFTPLHEA 520
Query: 406 AVKNDHMVCAEVLLRWGANSEVLNLRRERPIDFAKSQD 443
A K + +C ++LL+ GA+ N P+D K D
Sbjct: 521 AAKGKYEIC-KLLLKHGADPTKKNRDGNTPLDLVKEGD 557
Score = 62 (26.9 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 18/45 (40%), Positives = 25/45 (55%)
Query: 86 LVNEVEESSGMTALHLAAES-HTAR--CVELLLKKRARTDIRSKD 127
++N + S TALH A S H R ELLL+K A + ++KD
Sbjct: 276 IINFKQPQSHETALHCAVASLHPKRKQVTELLLRKGANVNEKNKD 320
Score = 59 (25.8 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 17/47 (36%), Positives = 25/47 (53%)
Query: 81 LGPVALVNEVEESSGMTALHLAAESHTARCVELLLKKRARTDIRSKD 127
L P+ + + T LHLAA + R V+LLL+ A D+ +KD
Sbjct: 118 LTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGA--DVHAKD 162
Score = 46 (21.3 bits), Expect = 0.00088, Sum P(2) = 0.00088
Identities = 15/36 (41%), Positives = 20/36 (55%)
Query: 85 ALVNEVEESSGMTALHLAAESHTARCVELLLKKRAR 120
A VNE + MT LH+AAE +E+L K A+
Sbjct: 312 ANVNE-KNKDFMTPLHVAAERAHNDVMEVLHKHGAK 346
Score = 39 (18.8 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 97 TALHLAA-ESHTARCVELLLKKRARTDIRSKDG 128
T LH AA + C+ +LL+ A +IR+ DG
Sbjct: 47 TPLHEAAIKGKIDVCI-VLLQHGADPNIRNTDG 78
>UNIPROTKB|F1M2S4 [details] [associations]
symbol:F1M2S4 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 IPI:IPI00951465
ProteinModelPortal:F1M2S4 Ensembl:ENSRNOT00000050715 Uniprot:F1M2S4
Length = 208
Score = 127 (49.8 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 33/82 (40%), Positives = 47/82 (57%)
Query: 549 KIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKHEKSAAAA 608
K+F+GGL F +SL +FE+ +G + D V K+S RGFGFVT+ + AA
Sbjct: 8 KLFIGGLSFKTTDESLRSHFEQ-WGTLTDCVVMRDPNTKRS--RGFGFVTYATVEEVDAA 64
Query: 609 VQARFVTIMGKEVEIKSAVPKE 630
+ AR + G+ VE K AV +E
Sbjct: 65 MNARPHKVDGRVVEPKRAVSRE 86
>UNIPROTKB|I3LPC2 [details] [associations]
symbol:ANKRD11 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060348 "bone development" evidence=IEA] [GO:0060323
"head morphogenesis" evidence=IEA] [GO:0048705 "skeletal system
morphogenesis" evidence=IEA] [GO:0035264 "multicellular organism
growth" evidence=IEA] [GO:0001894 "tissue homeostasis"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] InterPro:IPR002110 PROSITE:PS50088 SMART:SM00248
GO:GO:0001701 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0001894 GO:GO:0035264
GO:GO:0060348 GO:GO:0048705 GeneTree:ENSGT00550000074487
GO:GO:0060323 EMBL:FP312616 Ensembl:ENSSSCT00000025864 OMA:KNSAMAP
Uniprot:I3LPC2
Length = 444
Score = 140 (54.3 bits), Expect = 2.1e-05, Sum P(3) = 2.1e-05
Identities = 46/151 (30%), Positives = 68/151 (45%)
Query: 351 LLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLKTIMMETPLFFAVKND 410
L+ GA V+ ++ G TALH A G + L+ + +N K + +TPL A N
Sbjct: 156 LISEGADVNVKDFAGWTALHEACNRGYYDVAKQLLAAGAE-VNTKGLDDDTPLHDAANNG 214
Query: 411 HMVCAEVLLRWGANSEVLNLRRERPIDFAKSQDMRFLLKAANTCHTNLAFLNQEKQNASL 470
H ++LLR+G N + N + E P+ A S M LL T +T+ + +S
Sbjct: 215 HYKVVKLLLRYGGNPQQSNRKGETPLKVASSPTMVNLLLGKGT-YTS-------SEESSA 266
Query: 471 ESDEDISGTCEALLSMVDDNSNTERICSGTK 501
ES E+ A S VD N+ G K
Sbjct: 267 ESSEEEDAPSFAPSSSVDGNNTDSEFEKGLK 297
Score = 45 (20.9 bits), Expect = 2.1e-05, Sum P(3) = 2.1e-05
Identities = 16/41 (39%), Positives = 22/41 (53%)
Query: 87 VNEVEESSGMTALHLAAESHTARCVELLLKKRARTDIRSKD 127
VN+ E G T LH AA AR ++ L+ + A D+ KD
Sbjct: 130 VNKRNER-GETRLHRAAIRGDARRIKELISEGA--DVNVKD 167
Score = 37 (18.1 bits), Expect = 2.1e-05, Sum P(3) = 2.1e-05
Identities = 8/30 (26%), Positives = 11/30 (36%)
Query: 822 GALQLSKNGNPSSPVNSASDSNECDRNDSK 851
G +KN P D E D +D +
Sbjct: 295 GLKHKAKNPEPQKTATPVKDEYEFDEDDEQ 324
>GENEDB_PFALCIPARUM|PFD0700c [details] [associations]
symbol:PFD0700c "RNA binding protein, putative"
species:5833 "Plasmodium falciparum" [GO:0016070 "RNA metabolic
process" evidence=ISS] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0016070 EMBL:AL844503
HSSP:Q14103 RefSeq:XP_001351452.1 ProteinModelPortal:Q8I1U3
EnsemblProtists:PFD0700c:mRNA GeneID:812564 KEGG:pfa:PFD0700c
EuPathDB:PlasmoDB:PF3D7_0414500 HOGENOM:HOG000282694
ProtClustDB:CLSZ2431852 Uniprot:Q8I1U3
Length = 358
Score = 136 (52.9 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 41/129 (31%), Positives = 63/129 (48%)
Query: 540 HASTQEFKSKIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTF 599
+ + + + KIFVGGL ++ D+L YF FG I+ V + + SR FGFV F
Sbjct: 190 NTTPSDIQRKIFVGGLNYYWTKDTLESYFST-FGEID---VVQIVLDSSGRSRCFGFVVF 245
Query: 600 KHEKSAAAAVQARFVTIMGKEVEIKSAVPKEVLFAELQKQSAQQQESKHEHQARLGAKIP 659
+E S A ++ + I K VE++ A PK+ + K+S + SK A P
Sbjct: 246 SNENSVAKVLKHKRHKIYDKMVEVRKAEPKKPKMSI--KRSNNKNFSKFPPHIPFMAPFP 303
Query: 660 --DERTMEQ 666
++ TM Q
Sbjct: 304 PCNKETMAQ 312
Score = 42 (19.8 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 13/66 (19%), Positives = 29/66 (43%)
Query: 436 IDFAKSQDMRFLLKAANTCHTNLAFLNQEKQNASLESDEDISGTCEALLSMVDDNSNTER 495
+D + + ++K + H N + +++S++S +I C S +S E+
Sbjct: 27 VDHDEKVHVDSIVKKSECAH-NYEQREKRDRSSSVDSKPEIKKICRCHESNCSKSSKYEK 85
Query: 496 ICSGTK 501
G+K
Sbjct: 86 SSCGSK 91
>UNIPROTKB|Q8I1U3 [details] [associations]
symbol:PFD0700c "RNA binding protein, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0016070 "RNA
metabolic process" evidence=ISS] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0016070
EMBL:AL844503 HSSP:Q14103 RefSeq:XP_001351452.1
ProteinModelPortal:Q8I1U3 EnsemblProtists:PFD0700c:mRNA
GeneID:812564 KEGG:pfa:PFD0700c EuPathDB:PlasmoDB:PF3D7_0414500
HOGENOM:HOG000282694 ProtClustDB:CLSZ2431852 Uniprot:Q8I1U3
Length = 358
Score = 136 (52.9 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 41/129 (31%), Positives = 63/129 (48%)
Query: 540 HASTQEFKSKIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTF 599
+ + + + KIFVGGL ++ D+L YF FG I+ V + + SR FGFV F
Sbjct: 190 NTTPSDIQRKIFVGGLNYYWTKDTLESYFST-FGEID---VVQIVLDSSGRSRCFGFVVF 245
Query: 600 KHEKSAAAAVQARFVTIMGKEVEIKSAVPKEVLFAELQKQSAQQQESKHEHQARLGAKIP 659
+E S A ++ + I K VE++ A PK+ + K+S + SK A P
Sbjct: 246 SNENSVAKVLKHKRHKIYDKMVEVRKAEPKKPKMSI--KRSNNKNFSKFPPHIPFMAPFP 303
Query: 660 --DERTMEQ 666
++ TM Q
Sbjct: 304 PCNKETMAQ 312
Score = 42 (19.8 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 13/66 (19%), Positives = 29/66 (43%)
Query: 436 IDFAKSQDMRFLLKAANTCHTNLAFLNQEKQNASLESDEDISGTCEALLSMVDDNSNTER 495
+D + + ++K + H N + +++S++S +I C S +S E+
Sbjct: 27 VDHDEKVHVDSIVKKSECAH-NYEQREKRDRSSSVDSKPEIKKICRCHESNCSKSSKYEK 85
Query: 496 ICSGTK 501
G+K
Sbjct: 86 SSCGSK 91
>DICTYBASE|DDB_G0287379 [details] [associations]
symbol:DDB_G0287379 "putative GTPase activating
protein (GAP)" species:44689 "Dictyostelium discoideum" [GO:0032851
"positive regulation of Rab GTPase activity" evidence=IEA]
[GO:0032313 "regulation of Rab GTPase activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005097 "Rab GTPase
activator activity" evidence=IEA] InterPro:IPR002110
InterPro:IPR000195 Pfam:PF00023 Pfam:PF00566 PRINTS:PR01415
PROSITE:PS50086 PROSITE:PS50088 SMART:SM00164 SMART:SM00248
dictyBase:DDB_G0287379 eggNOG:COG0666 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
GO:GO:0005622 EMBL:AAFI02000100 GO:GO:0005097 GO:GO:0032851
SUPFAM:SSF47923 RefSeq:XP_637278.1 ProteinModelPortal:Q54KE5
EnsemblProtists:DDB0235320 GeneID:8626109 KEGG:ddi:DDB_G0287379
InParanoid:Q54KE5 OMA:TERYGMS Uniprot:Q54KE5
Length = 1076
Score = 117 (46.2 bits), Expect = 2.3e-05, Sum P(3) = 2.3e-05
Identities = 34/101 (33%), Positives = 52/101 (51%)
Query: 350 ILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDC-INLKTIMM-ETPLFFAV 407
ILL GA Q+ G + LH AA +G L LIR+ +C +++ + T L +A
Sbjct: 393 ILLDKGANPDQRALDGCSPLHYAASNGFEGCLNLLIRR--NCKLDITDVKRGRTALHYAA 450
Query: 408 KNDHMVCAEVLLRWGANSEVLNLRRERPIDFAKSQDMRFLL 448
H+ C E+LLR GA+S + +L + P + K + LL
Sbjct: 451 NKGHIGCVEILLRAGADSNIKDLSNKTPKNLTKDLQIISLL 491
Score = 78 (32.5 bits), Expect = 2.3e-05, Sum P(3) = 2.3e-05
Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 87 VNEVEESSGMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
+N +++ G TALH AA + +CV+LLL A TD+ DG
Sbjct: 202 INSLDDK-GTTALHHAAFNGHKQCVKLLLASNAYTDVPDIDG 242
Score = 62 (26.9 bits), Expect = 0.00085, Sum P(3) = 0.00085
Identities = 22/72 (30%), Positives = 38/72 (52%)
Query: 57 VTKLLRVSCIFDSVSCATSLVNGDLGPVALVNEVEESSGMTALHLAAESHTARCVELLLK 116
+T L++ S + C + L+ + G A VN +++S +ALH A + R V LL++
Sbjct: 309 ITPLIK-SASSKNFKCLSVLI--ERGG-ANVNS-KDNSNSSALHQACYKGSDRSVSLLIQ 363
Query: 117 KRARTDIRSKDG 128
K A + K+G
Sbjct: 364 KGAEVNCFDKEG 375
Score = 43 (20.2 bits), Expect = 2.3e-05, Sum P(3) = 2.3e-05
Identities = 19/90 (21%), Positives = 32/90 (35%)
Query: 804 NGSPNHMVLVPSPPKQKWGALQLSKNGNPSSPVNSASDSNECDRNDSKSPQDLRSVSISS 863
N NH P+ + S N N ++ NS + + N+S SP +
Sbjct: 683 NNHNNHNNTTPN--NNNTTSSSSSNNNNNNTNSNSTTTTTTSSLNNSTSPDTTLKLDKYG 740
Query: 864 TIERKPTNEVPKGSSSQRDTSTSAISASKK 893
+ K N P G + + T + +K
Sbjct: 741 FV--KGNN--PNGGLNDEEVKTKKMEKIEK 766
Score = 38 (18.4 bits), Expect = 7.1e-05, Sum P(3) = 7.1e-05
Identities = 16/64 (25%), Positives = 34/64 (53%)
Query: 837 NSASDSNECDRNDSKSPQDLRSVSISSTIERKPTNEVPKGSSSQRDTSTSAISASKKVID 896
NS +++N + +++ +P + + S SS+ N S+S T+TS+++ S D
Sbjct: 677 NSNNNNNNHNNHNNTTPNNNNTTSSSSS----NNNNNNTNSNSTTTTTTSSLNNSTSP-D 731
Query: 897 YSTI 900
+T+
Sbjct: 732 -TTL 734
>TAIR|locus:2119495 [details] [associations]
symbol:GR-RBP2 "AT4G13850" species:3702 "Arabidopsis
thaliana" [GO:0003723 "RNA binding" evidence=ISS;IDA] [GO:0005739
"mitochondrion" evidence=ISM;IDA] [GO:0009409 "response to cold"
evidence=IGI;IEP;IMP] [GO:0003690 "double-stranded DNA binding"
evidence=IDA] [GO:0003697 "single-stranded DNA binding"
evidence=IDA] [GO:0009414 "response to water deprivation"
evidence=IEP] [GO:0005524 "ATP binding" evidence=IDA] [GO:0001072
"RNA binding transcription antitermination factor activity"
evidence=IDA] [GO:0006970 "response to osmotic stress"
evidence=IMP] [GO:0009631 "cold acclimation" evidence=IMP]
[GO:0009651 "response to salt stress" evidence=IMP] [GO:0009845
"seed germination" evidence=IMP] [GO:0031564 "transcription
antitermination" evidence=IDA] [GO:0005507 "copper ion binding"
evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=RCA]
[GO:0006364 "rRNA processing" evidence=RCA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0005739 GO:GO:0005524 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0009409 Gene3D:3.30.70.330 GO:GO:0005507 GO:GO:0003723
GO:GO:0006970 GO:GO:0009845 GO:GO:0003690 GO:GO:0003697
eggNOG:COG0724 EMBL:AL035528 EMBL:AL161537 HOGENOM:HOG000276232
EMBL:AJ002892 EMBL:AY072361 EMBL:BT002197 EMBL:AY085621 EMBL:X69377
EMBL:Z18189 IPI:IPI00527583 PIR:S31443 PIR:T05254
RefSeq:NP_193121.1 UniGene:At.15585 UniGene:At.2
ProteinModelPortal:Q9SVM8 SMR:Q9SVM8 IntAct:Q9SVM8 STRING:Q9SVM8
PaxDb:Q9SVM8 PRIDE:Q9SVM8 ProMEX:Q9SVM8 EnsemblPlants:AT4G13850.1
GeneID:827019 KEGG:ath:AT4G13850 GeneFarm:3949 TAIR:At4g13850
InParanoid:Q9SVM8 OMA:ISEMDGK PhylomeDB:Q9SVM8 ProtClustDB:PLN03134
Genevestigator:Q9SVM8 Uniprot:Q9SVM8
Length = 158
Score = 115 (45.5 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 31/87 (35%), Positives = 48/87 (55%)
Query: 542 STQEFKSKIFVGGLPFFLDSDSLGGYFEKHFGPIEDARV-AEFQTEKQSVSRGFGFVTFK 600
S + +K+F+GGL + D SL F HFG + DA+V + +T + SRGFGFV F
Sbjct: 29 SLRLMSTKLFIGGLSWGTDDASLRDAFA-HFGDVVDAKVIVDRETGR---SRGFGFVNFN 84
Query: 601 HEKSAAAAV-QARFVTIMGKEVEIKSA 626
E +A AA+ + + G+ + + A
Sbjct: 85 DEGAATAAISEMDGKELNGRHIRVNPA 111
>UNIPROTKB|F1NBB6 [details] [associations]
symbol:LOC100859627 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR021662
Pfam:PF11627 GeneTree:ENSGT00700000104376 EMBL:AADN02020007
EMBL:AADN02020008 EMBL:AADN02020009 EMBL:AADN02020010
EMBL:AADN02020011 EMBL:AADN02020012 EMBL:AADN02020013
IPI:IPI00818847 Ensembl:ENSGALT00000029498 Uniprot:F1NBB6
Length = 310
Score = 132 (51.5 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 35/82 (42%), Positives = 47/82 (57%)
Query: 549 KIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKHEKSAAAA 608
K+F+GGL F DSL +FEK +G + D V K+S RGFGFVT+ + AA
Sbjct: 22 KLFIGGLSFETTDDSLREHFEK-WGTLTDCVVMRDPQTKRS--RGFGFVTYSCVEEVDAA 78
Query: 609 VQARFVTIMGKEVEIKSAVPKE 630
+ AR + G+ VE K AV +E
Sbjct: 79 MSARPHKVDGRVVEPKRAVSRE 100
Score = 127 (49.8 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 37/96 (38%), Positives = 52/96 (54%)
Query: 549 KIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQS-VSRGFGFVTFKHEKSAAA 607
KIFVGG+ + +L YFEK +G IE V E ++QS RGF FVTF +
Sbjct: 113 KIFVGGIKEDTEEYNLREYFEK-YGKIETIEVME---DRQSGKKRGFAFVTFDDHDTVDK 168
Query: 608 AVQARFVTIMGKEVEIKSAVPKEVLFAELQKQSAQQ 643
V ++ TI G E+K A+ K+ E+Q S+Q+
Sbjct: 169 IVVQKYHTINGHNCEVKKALSKQ----EMQTASSQR 200
>ZFIN|ZDB-GENE-060224-1 [details] [associations]
symbol:hnrnpa3 "heterogeneous nuclear
ribonucleoprotein A3" species:7955 "Danio rerio" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 ZFIN:ZDB-GENE-060224-1 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0030529 HOVERGEN:HBG002295
GeneTree:ENSGT00700000104376 EMBL:CR848724 IPI:IPI00863016
UniGene:Dr.85855 SMR:B0V1I7 Ensembl:ENSDART00000135273 OMA:IETIDIM
Uniprot:B0V1I7
Length = 312
Score = 132 (51.5 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 34/82 (41%), Positives = 46/82 (56%)
Query: 549 KIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKHEKSAAAA 608
K+F+GGL F DSL +FE+ +G + D V K+S RGFGFVT+ AA
Sbjct: 14 KLFIGGLSFETTEDSLRAHFEQ-WGKLTDCVVMRDPANKRS--RGFGFVTYSSVSEVDAA 70
Query: 609 VQARFVTIMGKEVEIKSAVPKE 630
+ AR + G+ VE K AV +E
Sbjct: 71 MTARPHKVDGRVVEPKRAVSRE 92
>UNIPROTKB|J3KQA8 [details] [associations]
symbol:HNRNPA1 "Heterogeneous nuclear ribonucleoprotein A1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
EMBL:AC078778 HGNC:HGNC:5031 ChiTaRS:HNRNPA1
ProteinModelPortal:J3KQA8 Ensembl:ENST00000420780 Uniprot:J3KQA8
Length = 102
Score = 112 (44.5 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 29/74 (39%), Positives = 42/74 (56%)
Query: 549 KIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKHEKSAAAA 608
K+F+GGL F +SL +FE+ +G + D V K+S RGFGFVT+ + AA
Sbjct: 15 KLFIGGLSFETTDESLRSHFEQ-WGTLTDCVVMRDPNTKRS--RGFGFVTYATVEEVDAA 71
Query: 609 VQARFVTIMGKEVE 622
+ AR + G+ VE
Sbjct: 72 MNARPHKVDGRVVE 85
>UNIPROTKB|Q7ZYE9 [details] [associations]
symbol:hnrnpab "Hnrpab-prov protein" species:8355 "Xenopus
laevis" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
HOVERGEN:HBG002295 HSSP:Q14103 KO:K13044 InterPro:IPR012956
Pfam:PF08143 CTD:3182 EMBL:BC043814 RefSeq:NP_001080489.1
UniGene:Xl.45404 ProteinModelPortal:Q7ZYE9 SMR:Q7ZYE9 IntAct:Q7ZYE9
GeneID:380181 KEGG:xla:380181 Xenbase:XB-GENE-6043063
Uniprot:Q7ZYE9
Length = 324
Score = 132 (51.5 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 38/102 (37%), Positives = 51/102 (50%)
Query: 530 RKMNPGMCMIHASTQEFKSKIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQS 589
R ++P M A ++ KIFVGGL D + YFE FG IE + K +
Sbjct: 132 RLIDPKKAM--AMKKDPIKKIFVGGLNPEAGEDQIREYFET-FGEIEAIELP--MDPKTN 186
Query: 590 VSRGFGFVTFKHEKSAAAAVQARFVTIMGKEVEIKSAVPKEV 631
RGF F+TFK E ++ +F + G + EIK A PKEV
Sbjct: 187 KRRGFVFITFKEEDPVKKILEKKFHNVSGSKCEIKIAQPKEV 228
>UNIPROTKB|D6RBZ0 [details] [associations]
symbol:HNRNPAB "Heterogeneous nuclear ribonucleoprotein
A/B" species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 HOGENOM:HOG000234441
InterPro:IPR012956 Pfam:PF08143 EMBL:AC136632 HGNC:HGNC:5034
ChiTaRS:HNRNPAB IPI:IPI00964992 ProteinModelPortal:D6RBZ0
SMR:D6RBZ0 Ensembl:ENST00000506339 ArrayExpress:D6RBZ0 Bgee:D6RBZ0
Uniprot:D6RBZ0
Length = 327
Score = 132 (51.5 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 39/112 (34%), Positives = 58/112 (51%)
Query: 524 LGEEQHRK----MNPGMCMIHASTQEFKSKIFVGGLPFFLDSDSLGGYFEKHFGPIEDAR 579
L +++HR ++P M A ++ KIFVGGL + + YF + FG IE
Sbjct: 128 LDQKEHRLDGRVIDPKKAM--AMKKDPVKKIFVGGLNPEATEEKIREYFGE-FGEIEAIE 184
Query: 580 VAEFQTEKQSVSRGFGFVTFKHEKSAAAAVQARFVTIMGKEVEIKSAVPKEV 631
+ K + RGF F+TFK E+ ++ +F T+ G + EIK A PKEV
Sbjct: 185 LP--MDPKLNKRRGFVFITFKEEEPVKKVLEKKFHTVSGSKCEIKVAQPKEV 234
>UNIPROTKB|Q99729 [details] [associations]
symbol:HNRNPAB "Heterogeneous nuclear ribonucleoprotein
A/B" species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IDA]
[GO:0003723 "RNA binding" evidence=TAS] [GO:0003729 "mRNA binding"
evidence=TAS] [GO:0001837 "epithelial to mesenchymal transition"
evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS;IDA] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=ISS]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0005634 GO:GO:0005737 GO:GO:0045893 GO:GO:0000166
GO:GO:0003729 Gene3D:3.30.70.330 GO:GO:0030529 GO:GO:0001837
EMBL:CH471165 eggNOG:COG0724 HOGENOM:HOG000234441
HOVERGEN:HBG002295 KO:K13044 InterPro:IPR012956 Pfam:PF08143
EMBL:M65028 EMBL:U76713 EMBL:AK054600 EMBL:AK097657 EMBL:BC001616
EMBL:BC002625 EMBL:BC004561 EMBL:BC009359 EMBL:BC036708
IPI:IPI00106509 IPI:IPI00329355 IPI:IPI00334587 IPI:IPI00334713
PIR:S17563 RefSeq:NP_004490.2 RefSeq:NP_112556.2 UniGene:Hs.591731
UniGene:Hs.715055 PDB:3S7R PDBsum:3S7R ProteinModelPortal:Q99729
SMR:Q99729 IntAct:Q99729 MINT:MINT-4537784 STRING:Q99729
PhosphoSite:Q99729 DMDM:158523286 SWISS-2DPAGE:Q99729 PaxDb:Q99729
PRIDE:Q99729 Ensembl:ENST00000355836 Ensembl:ENST00000358344
Ensembl:ENST00000504898 Ensembl:ENST00000506259 GeneID:3182
KEGG:hsa:3182 UCSC:uc003miu.3 UCSC:uc003miv.3 CTD:3182
GeneCards:GC05P177631 HGNC:HGNC:5034 HPA:HPA046688 MIM:602688
neXtProt:NX_Q99729 PharmGKB:PA162391196 InParanoid:Q99729
OMA:FILFKDP OrthoDB:EOG42BX9K ChiTaRS:HNRNPAB
EvolutionaryTrace:Q99729 GenomeRNAi:3182 NextBio:12628
ArrayExpress:Q99729 Bgee:Q99729 CleanEx:HS_HNRNPAB
Genevestigator:Q99729 GermOnline:ENSG00000197451 Uniprot:Q99729
Length = 332
Score = 132 (51.5 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 40/113 (35%), Positives = 59/113 (52%)
Query: 524 LGEEQHRK----MNPGMCMIHASTQEFKSKIFVGGL-PFFLDSDSLGGYFEKHFGPIEDA 578
L +++HR ++P M A ++ KIFVGGL P + + YF + FG IE
Sbjct: 127 LDQKEHRLDGRVIDPKKAM--AMKKDPVKKIFVGGLNPESPTEEKIREYFGE-FGEIEAI 183
Query: 579 RVAEFQTEKQSVSRGFGFVTFKHEKSAAAAVQARFVTIMGKEVEIKSAVPKEV 631
+ K + RGF F+TFK E+ ++ +F T+ G + EIK A PKEV
Sbjct: 184 ELP--MDPKLNKRRGFVFITFKEEEPVKKVLEKKFHTVSGSKCEIKVAQPKEV 234
>UNIPROTKB|F1M5N3 [details] [associations]
symbol:Ank2 "Protein Ank2" species:10116 "Rattus
norvegicus" [GO:0007165 "signal transduction" evidence=IEA]
InterPro:IPR000488 Pfam:PF00531 InterPro:IPR002110 Pfam:PF00023
PRINTS:PR01415 PROSITE:PS50017 PROSITE:PS50088 SMART:SM00005
SMART:SM00248 RGD:620156 GO:GO:0007165 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
InterPro:IPR000906 Pfam:PF00791 SMART:SM00218 PROSITE:PS51145
GeneTree:ENSGT00700000104348 IPI:IPI00779223
Ensembl:ENSRNOT00000037255 ArrayExpress:F1M5N3 Uniprot:F1M5N3
Length = 3838
Score = 132 (51.5 bits), Expect = 2.7e-05, Sum P(4) = 2.7e-05
Identities = 60/206 (29%), Positives = 83/206 (40%)
Query: 235 LALGRATKLQRAVKRNSTPTTSQSAEKRKXXXXXXXXXXXFGAVANGSCTDKKVGPPLIL 294
L L R A K TP A K K +GA N + T + V PL L
Sbjct: 559 LLLQRRAAADSAGKNGYTPL--HIAAK-KNQMQIASTLLNYGAETN-TVTKQGV-TPLHL 613
Query: 295 ATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKTSMGLSQHILQNRIVGILLKH 354
A+Q G D++ +LL+ G ++LH A +Q N + IL KH
Sbjct: 614 ASQEGHTDMVTLLLEK---GANIHMSTKSGLTSLHLA-------AQEDKVN-VADILTKH 662
Query: 355 GAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLKTIMMETPLFFAVKNDHMVC 414
GA KLG T L +A GN + + L+++ + +N KT TPL A + H
Sbjct: 663 GADQDAYTKLGYTPLIVACHYGNVKMVNFLLKQGAN-VNAKTKNGYTPLHQAAQQGHTHI 721
Query: 415 AEVLLRWGANSEVLNLRRERPIDFAK 440
VLL+ GA + AK
Sbjct: 722 INVLLQHGAKPNATTANGNTALAIAK 747
Score = 76 (31.8 bits), Expect = 2.7e-05, Sum P(4) = 2.7e-05
Identities = 25/86 (29%), Positives = 38/86 (44%)
Query: 47 LDNADQQTAIVTKLLRVSCIFDSVSCATSLV----NGDLGPVALVNEVEESSGMTALHLA 102
L+N D + + L ++ D A L+ N D+ +VN ES G T LH+A
Sbjct: 161 LEN-DTKGKVRLPALHIAARKDDTKSAALLLQNDHNADVQSKMMVNRTTES-GFTPLHIA 218
Query: 103 AESHTARCVELLLKKRARTDIRSKDG 128
A LLL + A D +++G
Sbjct: 219 AHYGNVNVATLLLNRGAAVDFTARNG 244
Score = 49 (22.3 bits), Expect = 2.7e-05, Sum P(4) = 2.7e-05
Identities = 46/212 (21%), Positives = 74/212 (34%)
Query: 693 EATAEKSWAGRLLYGQPKTSSNESQAYLVESFEEKSMPKWLRTFKKWLPRFLKDVYRHPL 752
E + E S A ++ S A +S +++ P + KK + R LK+ +
Sbjct: 1571 EKSGETSQASAIVKSSESNKGKTSPAEEKQSAQKQVKPSLV--IKKPVRRKLKEKQKQKE 1628
Query: 753 EGKYALSSLKTDFKAVCGLE-LDH-ASLGYSKLSDFLRTLPDLCHVKAGPIGKNGSPNHM 810
E S KT+ K E +D L L T P ++ PIG
Sbjct: 1629 ESPQG-SEEKTELKKGSSEESVDEDRGLAPEPLPTAKATSP---LIEETPIGSIKDKVKA 1684
Query: 811 VLVPSPPKQKWGA-LQLSKNGNPSSPVNSASDSNECDRNDSKSPQDLRSVSISSTIERKP 869
+ +QK + L + G P + ++ SKS + SS
Sbjct: 1685 LQKRVEDEQKGRSKLPVRVKGKEDVPKKTTPRTHPVVSPSSKSSPSSKMERHSSLTSSAK 1744
Query: 870 TNEVPKGSSSQRDTSTSAISASKKVIDYSTIF 901
T S S ++ S +S S K +S +F
Sbjct: 1745 TERHSPVSPSSKNEKHSPVSPSAKAERHSPVF 1776
Score = 47 (21.6 bits), Expect = 0.00024, Sum P(5) = 0.00024
Identities = 18/73 (24%), Positives = 27/73 (36%)
Query: 809 HMVLVPSPPKQKWGALQLSKNGNPSSPVNSASDSNECDRNDSKSPQDLRSVSISSTIERK 868
H + PS +K + S SPV S S S ++ R +SS +
Sbjct: 1748 HSPVSPSSKNEKHSPVSPSAKAERHSPVFSGKPEKHSP--GSPSTKNERHSPVSSIKTER 1805
Query: 869 PTNEVPKGSSSQR 881
T P G + +R
Sbjct: 1806 HTPVSPSGKTDKR 1818
Score = 45 (20.9 bits), Expect = 2.7e-05, Sum P(4) = 2.7e-05
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 1012 EHLCVICDKKVEDIMLISNPEEFPPL 1037
E LC + +KK ++ S + PP+
Sbjct: 3577 EELCAVKEKKEQEASKESESSDHPPM 3602
Score = 43 (20.2 bits), Expect = 0.00030, Sum P(5) = 0.00030
Identities = 19/64 (29%), Positives = 26/64 (40%)
Query: 833 SSPVNSASDSNECDRNDSKSPQDLRSVSISSTIERKPTNEVPKGSSSQRDTSTSAISASK 892
SS S SN + D+ P + S + S I R +V SSS R S A +
Sbjct: 2830 SSSFFSGEPSNF--QTDTCHPTVVHSPEVYSVIIRSSPEDVIMTSSSSRTDSGEASNCEG 2887
Query: 893 KVID 896
+D
Sbjct: 2888 HDLD 2891
Score = 42 (19.8 bits), Expect = 0.00056, Sum P(6) = 0.00056
Identities = 10/30 (33%), Positives = 18/30 (60%)
Query: 620 EVEIKSAVPKEVLFAELQKQSAQQQESKHE 649
E E+ V K F EL++++ Q+++ K E
Sbjct: 2483 EEEMFKMVTKIKTFDELEQEAKQKRDYKRE 2512
Score = 40 (19.1 bits), Expect = 0.00030, Sum P(5) = 0.00030
Identities = 26/91 (28%), Positives = 37/91 (40%)
Query: 749 RHPLEGKYALSSLKTDFKAVCGLELDHAS-LGYSKLSDFLRTLPDLCHVKAGPIGKNGSP 807
R+ LEG + SL++ F + L HAS L S + D +P H + + K
Sbjct: 833 RYSLEGGRS-DSLRS-FSSDRSHTLSHASYLRDSAMIDDTVVIPS--H-QVSALAKEAER 887
Query: 808 NHMVLVPSPPKQKWGALQLSKNGNPSSPVNS 838
N L WG L SSP++S
Sbjct: 888 NSYRL-------SWGTENLDNVALSSSPIHS 911
Score = 38 (18.4 bits), Expect = 0.00056, Sum P(6) = 0.00056
Identities = 10/35 (28%), Positives = 13/35 (37%)
Query: 801 IGKNGSPNHMVLVPSPPKQKWGALQLSKNGNPSSP 835
I N SP P PKQ + +P +P
Sbjct: 2597 IDSNSSPEEAQFQPIVPKQYTFKMNEEVKEDPGNP 2631
Score = 37 (18.1 bits), Expect = 0.00024, Sum P(5) = 0.00024
Identities = 14/47 (29%), Positives = 18/47 (38%)
Query: 598 TFKHEKSAAAAVQARFVTIMGKEVEIKSAVPKEVLFAELQKQSAQQQ 644
T HEK A + T + S K +KQSAQ+Q
Sbjct: 1559 TGTHEKKPQTAPEKSGETSQASAIVKSSESNKGKTSPAEEKQSAQKQ 1605
>MGI|MGI:1924568 [details] [associations]
symbol:Ankrd55 "ankyrin repeat domain 55" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002110 PROSITE:PS50088 SMART:SM00248
MGI:MGI:1924568 eggNOG:COG0666 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 EMBL:AK021066
EMBL:AK045480 EMBL:AK138273 EMBL:AC154639 IPI:IPI00222792
RefSeq:NP_001161875.1 RefSeq:NP_084174.2 UniGene:Mm.159895
HSSP:P07207 ProteinModelPortal:Q8BLD6 SMR:Q8BLD6 PhosphoSite:Q8BLD6
PRIDE:Q8BLD6 Ensembl:ENSMUST00000022275 GeneID:77318 KEGG:mmu:77318
CTD:79722 GeneTree:ENSGT00390000014551 HOGENOM:HOG000285984
HOVERGEN:HBG080859 InParanoid:Q8BLD6 OMA:FDQQKGD OrthoDB:EOG4KKZ2N
NextBio:346753 Bgee:Q8BLD6 CleanEx:MM_ANKRD55 Genevestigator:Q8BLD6
Uniprot:Q8BLD6
Length = 626
Score = 124 (48.7 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 34/101 (33%), Positives = 57/101 (56%)
Query: 345 NRIV-GILLKH--G-AIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLKTIMME 400
NRI+ I+L H G +I++ ++ G T +HIAA SG + DL K P+C NL+ + ++
Sbjct: 206 NRILCSIILSHRQGPSIINYDDESGKTCVHIAAASGFGDIINDLA-KVPEC-NLQALDVD 263
Query: 401 --TPLFFAVKNDHMVCAEVLLRWGANSEVLNLRRERPIDFA 439
TPL +A + C + LL G +S + ++ P+ +A
Sbjct: 264 DRTPLHWAAASGKAECVQSLLDLGMDSNLRDINESTPLAYA 304
Score = 61 (26.5 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 14/37 (37%), Positives = 22/37 (59%)
Query: 91 EESSGMTALHLAAESHTARCVELLLKKRARTDIRSKD 127
+++ GMT LH AA + + ++LLKK A + KD
Sbjct: 157 QDTEGMTPLHWAAFHNRPQHTQMLLKKGADPTLVDKD 193
>WB|WBGene00022235 [details] [associations]
symbol:sqd-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000003
"reproduction" evidence=IMP] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0000003 GO:GO:0003676 EMBL:FO081731
eggNOG:COG0724 GeneTree:ENSGT00700000104255 KO:K03102
RefSeq:NP_001023574.1 ProteinModelPortal:Q4W5P0 SMR:Q4W5P0
STRING:Q4W5P0 PaxDb:Q4W5P0 PRIDE:Q4W5P0 EnsemblMetazoa:Y73B6BL.6b.1
EnsemblMetazoa:Y73B6BL.6b.2 EnsemblMetazoa:Y73B6BL.6b.3
EnsemblMetazoa:Y73B6BL.6b.4 EnsemblMetazoa:Y73B6BL.6b.5
EnsemblMetazoa:Y73B6BL.6b.6 EnsemblMetazoa:Y73B6BL.6b.7
EnsemblMetazoa:Y73B6BL.6b.8 GeneID:177392 KEGG:cel:CELE_Y73B6BL.6
UCSC:Y73B6BL.6a.7 CTD:177392 WormBase:Y73B6BL.6b
HOGENOM:HOG000017794 InParanoid:Q4W5P0 OMA:GHQTGYK NextBio:896614
ArrayExpress:Q4W5P0 Uniprot:Q4W5P0
Length = 308
Score = 131 (51.2 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 39/122 (31%), Positives = 60/122 (49%)
Query: 517 GSKCFYALGEEQHRKMNPGMCMIHASTQEFKSKIFVGGLPFFLDSDSLGGYFEKHFGPIE 576
G C AL + + + A ++E K K+FVGGLP L +FE+ FG ++
Sbjct: 80 GEGCKLALAAREQTIKGKSVEVKPAKSRENK-KVFVGGLPSDYSEQDLRSHFEQ-FGKVD 137
Query: 577 DARVAEFQTEKQSVSR-GFGFVTFKHEKSAAAAVQARFVTIMGKEVEIKSAVPKEVLFAE 635
D E+ +KQ+ +R F F+ F+ E+SA A T +E ++K AVP+ F
Sbjct: 138 DI---EWPFDKQTKARRNFAFIVFEEEESADKASSQTKQTFGTRECDVKKAVPQGKRFPG 194
Query: 636 LQ 637
Q
Sbjct: 195 AQ 196
Score = 127 (49.8 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 37/115 (32%), Positives = 57/115 (49%)
Query: 540 HASTQEFKSKIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTF 599
H++ KIFVGG+ ++++ L +F + +G + A+V +T +S RGF FV F
Sbjct: 21 HSTKGNEDKKIFVGGISPEVNNEDLSSHFTQ-YGEVAQAQVKYDRTNGRS--RGFAFVEF 77
Query: 600 KHEKSAAAAVQARFVTIMGKEVEIKSAVPKE---VLFAELQKQSAQQQESKHEHQ 651
+ A+ AR TI GK VE+K A +E V L ++Q H Q
Sbjct: 78 TTGEGCKLALAAREQTIKGKSVEVKPAKSRENKKVFVGGLPSDYSEQDLRSHFEQ 132
>ZFIN|ZDB-GENE-040426-2516 [details] [associations]
symbol:zgc:77052 "zgc:77052" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
ZFIN:ZDB-GENE-040426-2516 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 eggNOG:COG0724 HOGENOM:HOG000234441
HOVERGEN:HBG002295 GeneTree:ENSGT00700000104347 InterPro:IPR012956
Pfam:PF08143 OrthoDB:EOG42BX9K EMBL:FP085391 EMBL:BC066681
IPI:IPI00497482 RefSeq:NP_998467.1 UniGene:Dr.75633 SMR:Q6NYA1
STRING:Q6NYA1 Ensembl:ENSDART00000098408 GeneID:406594
KEGG:dre:406594 OMA:EIKTYFS NextBio:20818146 Uniprot:Q6NYA1
Length = 309
Score = 131 (51.2 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 38/103 (36%), Positives = 54/103 (52%)
Query: 530 RKMNPGMCMIHASTQEFKSKIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTE-KQ 588
R+++P M A +E KIFVGGL + + YF FG IE E T+ K
Sbjct: 113 RQIDPKRAM--AIKKEPVKKIFVGGLNPETTEEKIREYFGS-FGEIE---TIELPTDPKT 166
Query: 589 SVSRGFGFVTFKHEKSAAAAVQARFVTIMGKEVEIKSAVPKEV 631
S RGF F+TFK E + ++ ++ + G + EIK A PKE+
Sbjct: 167 SKRRGFVFITFKEEFAVKKILEKKYHNVCGSKCEIKIAQPKEI 209
>UNIPROTKB|D4A1X0 [details] [associations]
symbol:D4A1X0 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0005634 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0097157
GO:GO:0048025 OrthoDB:EOG4HQDKF IPI:IPI00778370
ProteinModelPortal:D4A1X0 Ensembl:ENSRNOT00000061082 Uniprot:D4A1X0
Length = 312
Score = 131 (51.2 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 34/82 (41%), Positives = 46/82 (56%)
Query: 549 KIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKHEKSAAAA 608
K+F+GGL F +SL Y+E+ +G + D V K+S RGFGFVTF A
Sbjct: 10 KLFIGGLSFETTEESLRNYYEQ-WGKLTDCVVMRDPASKRS--RGFGFVTFSSMAEVDVA 66
Query: 609 VQARFVTIMGKEVEIKSAVPKE 630
+ AR +I G+ VE K AV +E
Sbjct: 67 MAARPHSIDGRVVEPKRAVARE 88
>UNIPROTKB|D4A491 [details] [associations]
symbol:D4A491 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 OrthoDB:EOG4HQDKF
IPI:IPI00560785 ProteinModelPortal:D4A491
Ensembl:ENSRNOT00000046349 OMA:DNAMEAR Uniprot:D4A491
Length = 239
Score = 128 (50.1 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 33/82 (40%), Positives = 47/82 (57%)
Query: 549 KIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKHEKSAAAA 608
K+F+GGL F +SL +FE+ +G + D V K+S RGFGFVT+ + AA
Sbjct: 8 KLFIGGLSFETTDESLRSHFEQ-WGTLTDCVVMRDPNTKRS--RGFGFVTYATVEEVDAA 64
Query: 609 VQARFVTIMGKEVEIKSAVPKE 630
+ AR + G+ VE K AV +E
Sbjct: 65 MNARPHKVNGRVVEPKRAVSRE 86
>TAIR|locus:2077427 [details] [associations]
symbol:AT3G08000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC013483 eggNOG:COG0724
HOGENOM:HOG000276232 HSSP:Q14103 UniGene:At.40270 UniGene:At.28103
EMBL:BT012118 EMBL:BT012373 IPI:IPI00520412 RefSeq:NP_187457.1
ProteinModelPortal:Q9SFB4 SMR:Q9SFB4 EnsemblPlants:AT3G08000.1
GeneID:819991 KEGG:ath:AT3G08000 TAIR:At3g08000 InParanoid:Q9SFB4
OMA:FCTSSSA PhylomeDB:Q9SFB4 ProtClustDB:CLSN2915579
Genevestigator:Q9SFB4 Uniprot:Q9SFB4
Length = 143
Score = 111 (44.1 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 32/97 (32%), Positives = 49/97 (50%)
Query: 534 PGMCMIHASTQEFKSKIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRG 593
P C +S+ SK+F+GGL + +D SL F FG + + R+A + SRG
Sbjct: 29 PQFCT--SSSASPSSKLFIGGLSWSVDEQSLKDAFSS-FGEVAEVRIA--YDKGSGRSRG 83
Query: 594 FGFVTFKHEKSAAAAVQARFVT-IMGKEVEIKSAVPK 629
FGFV F E A +A A ++G+ + I A+ +
Sbjct: 84 FGFVDFAEEGDALSAKDAMDGKGLLGRPLRISFALER 120
>MGI|MGI:1341087 [details] [associations]
symbol:Tnks "tankyrase, TRF1-interacting ankyrin-related
ADP-ribose polymerase" species:10090 "Mus musculus" [GO:0000209
"protein polyubiquitination" evidence=ISO] [GO:0000775 "chromosome,
centromeric region" evidence=IEA] [GO:0000781 "chromosome,
telomeric region" evidence=ISO] [GO:0000784 "nuclear chromosome,
telomeric region" evidence=ISO] [GO:0003950 "NAD+
ADP-ribosyltransferase activity" evidence=ISO] [GO:0005634
"nucleus" evidence=IEA] [GO:0005643 "nuclear pore" evidence=IEA]
[GO:0005694 "chromosome" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0006471 "protein
ADP-ribosylation" evidence=ISO] [GO:0006810 "transport"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=ISO]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0016757 "transferase activity, transferring
glycosyl groups" evidence=IEA] [GO:0018105 "peptidyl-serine
phosphorylation" evidence=ISO] [GO:0018107 "peptidyl-threonine
phosphorylation" evidence=ISO] [GO:0032212 "positive regulation of
telomere maintenance via telomerase" evidence=ISO] [GO:0043392
"negative regulation of DNA binding" evidence=ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0070198 "protein
localization to chromosome, telomeric region" evidence=ISO]
[GO:0070212 "protein poly-ADP-ribosylation" evidence=ISO]
[GO:0070213 "protein auto-ADP-ribosylation" evidence=ISO]
[GO:0090263 "positive regulation of canonical Wnt receptor
signaling pathway" evidence=ISO] InterPro:IPR002110
InterPro:IPR001660 InterPro:IPR011510 InterPro:IPR012317
Pfam:PF00023 Pfam:PF00644 Pfam:PF07647 PRINTS:PR01415
PROSITE:PS50088 PROSITE:PS50105 PROSITE:PS51059 SMART:SM00248
SMART:SM00454 MGI:MGI:1341087 GO:GO:0005794 GO:GO:0000139
GO:GO:0000775 GO:GO:0051301 GO:GO:0007067 GO:GO:0016055
GO:GO:0046872 eggNOG:COG0666 GO:GO:0015031 GO:GO:0008270
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0045944 GO:GO:0005643 GO:GO:0018105
GO:GO:0070198 GO:GO:0018107 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0000922 GO:GO:0090263 GO:GO:0000209
GeneTree:ENSGT00700000104124 GO:GO:0051028 GO:GO:0000784 PDB:3UTM
PDBsum:3UTM GO:GO:0003950 GO:GO:0043392 GO:GO:0032212 GO:GO:0070213
GO:GO:0070212 CTD:8658 HOGENOM:HOG000246964 HOVERGEN:HBG059472
KO:K10799 OMA:DDKEYQS OrthoDB:EOG45MN4H EMBL:AK048860 EMBL:AC122458
EMBL:BC057370 IPI:IPI00420879 IPI:IPI01018382 RefSeq:NP_780300.2
UniGene:Mm.88364 ProteinModelPortal:Q6PFX9 SMR:Q6PFX9 STRING:Q6PFX9
PhosphoSite:Q6PFX9 PaxDb:Q6PFX9 PRIDE:Q6PFX9
Ensembl:ENSMUST00000033929 GeneID:21951 KEGG:mmu:21951
UCSC:uc009lku.1 InParanoid:Q8BX62 NextBio:301616 Bgee:Q6PFX9
Genevestigator:Q6PFX9 Uniprot:Q6PFX9
Length = 1320
Score = 130 (50.8 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 38/99 (38%), Positives = 53/99 (53%)
Query: 351 LLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLKTIMMETPLFFAV-KN 409
LL+HGA V+ Q+K GL LH AA G+ + L+ K C+N TPL A K
Sbjct: 849 LLEHGADVNAQDKGGLIPLHNAASYGHVD-IAALLIKYNTCVNATDKWAFTPLHEAAQKG 907
Query: 410 DHMVCAEVLLRWGANSEVLNLRRERPIDFAKSQDMRFLL 448
+CA +LL GA+ + N + P+D A + D+R LL
Sbjct: 908 RTQLCA-LLLAHGADPTMKNQEGQTPLDLATADDIRALL 945
Score = 62 (26.9 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 18/45 (40%), Positives = 25/45 (55%)
Query: 86 LVNEVEESSGMTALHLAAES-HTAR--CVELLLKKRARTDIRSKD 127
++N + S TALH A S H R ELLL+K A + ++KD
Sbjct: 506 IINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKD 550
Score = 59 (25.8 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 17/47 (36%), Positives = 25/47 (53%)
Query: 81 LGPVALVNEVEESSGMTALHLAAESHTARCVELLLKKRARTDIRSKD 127
L P+ + + T LHLAA + R V+LLL+ A D+ +KD
Sbjct: 348 LTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGA--DVHAKD 392
>UNIPROTKB|E1B8R5 [details] [associations]
symbol:TNKS "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090263 "positive regulation of canonical Wnt receptor
signaling pathway" evidence=IEA] [GO:0070213 "protein
auto-ADP-ribosylation" evidence=IEA] [GO:0070212 "protein
poly-ADP-ribosylation" evidence=IEA] [GO:0070198 "protein
localization to chromosome, telomeric region" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043392 "negative
regulation of DNA binding" evidence=IEA] [GO:0032212 "positive
regulation of telomere maintenance via telomerase" evidence=IEA]
[GO:0018107 "peptidyl-threonine phosphorylation" evidence=IEA]
[GO:0018105 "peptidyl-serine phosphorylation" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] [GO:0000784 "nuclear chromosome, telomeric
region" evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0003950 "NAD+ ADP-ribosyltransferase activity"
evidence=IEA] InterPro:IPR002110 InterPro:IPR001660
InterPro:IPR011510 InterPro:IPR012317 Pfam:PF00023 Pfam:PF00644
Pfam:PF07647 PRINTS:PR01415 PROSITE:PS50088 PROSITE:PS50105
PROSITE:PS51059 SMART:SM00248 SMART:SM00454 GO:GO:0008270
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0045944 GO:GO:0018105 GO:GO:0070198
GO:GO:0018107 Gene3D:1.10.150.50 InterPro:IPR013761 SUPFAM:SSF47769
GO:GO:0090263 GO:GO:0000209 GeneTree:ENSGT00700000104124
GO:GO:0000784 GO:GO:0003950 GO:GO:0043392 GO:GO:0032212
GO:GO:0070213 GO:GO:0070212 CTD:8658 KO:K10799 OMA:DDKEYQS
EMBL:DAAA02060431 IPI:IPI00707554 RefSeq:NP_001193089.1
UniGene:Bt.42789 ProteinModelPortal:E1B8R5 PRIDE:E1B8R5
Ensembl:ENSBTAT00000001917 GeneID:535030 KEGG:bta:535030
NextBio:20876602 Uniprot:E1B8R5
Length = 1327
Score = 130 (50.8 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 38/99 (38%), Positives = 53/99 (53%)
Query: 351 LLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLKTIMMETPLFFAV-KN 409
LL+HGA V+ Q+K GL LH AA G+ + L+ K C+N TPL A K
Sbjct: 856 LLEHGADVNAQDKGGLIPLHNAASYGHVD-IAALLIKYNTCVNATDKWAFTPLHEAAQKG 914
Query: 410 DHMVCAEVLLRWGANSEVLNLRRERPIDFAKSQDMRFLL 448
+CA +LL GA+ + N + P+D A + D+R LL
Sbjct: 915 RTQLCA-LLLAHGADPTMKNQEGQTPLDLATADDIRALL 952
Score = 119 (46.9 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 30/106 (28%), Positives = 59/106 (55%)
Query: 326 SALHCALKTSMGLSQHILQNRIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLI 385
+ALHCA+ S H + ++ +LL+ GA V+++NK +T LH+AA ++ +E ++
Sbjct: 524 TALHCAVA-----SLHPKRKQVTELLLRKGANVNEKNKDFMTPLHVAAERAHNDVME-VL 577
Query: 386 RKEPDCINLKTIMMETPLFFAVKNDHMVCAEVLLRWGANSEVLNLR 431
K +N + +T L A H+ +LL +G++ +++L+
Sbjct: 578 HKHGAKMNALDTLGQTALHRAALAGHLQTCRLLLSYGSDPSIISLQ 623
Score = 62 (26.9 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 18/45 (40%), Positives = 25/45 (55%)
Query: 86 LVNEVEESSGMTALHLAAES-HTAR--CVELLLKKRARTDIRSKD 127
++N + S TALH A S H R ELLL+K A + ++KD
Sbjct: 513 IINFKQPQSHETALHCAVASLHPKRKQVTELLLRKGANVNEKNKD 557
Score = 59 (25.8 bits), Expect = 6.5e-05, Sum P(2) = 6.5e-05
Identities = 17/47 (36%), Positives = 25/47 (53%)
Query: 81 LGPVALVNEVEESSGMTALHLAAESHTARCVELLLKKRARTDIRSKD 127
L P+ + + T LHLAA + R V+LLL+ A D+ +KD
Sbjct: 355 LTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGA--DVHAKD 399
>UNIPROTKB|E2QU22 [details] [associations]
symbol:TNKS "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0090263 "positive regulation of canonical Wnt
receptor signaling pathway" evidence=IEA] [GO:0070213 "protein
auto-ADP-ribosylation" evidence=IEA] [GO:0070212 "protein
poly-ADP-ribosylation" evidence=IEA] [GO:0070198 "protein
localization to chromosome, telomeric region" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043392 "negative
regulation of DNA binding" evidence=IEA] [GO:0032212 "positive
regulation of telomere maintenance via telomerase" evidence=IEA]
[GO:0018107 "peptidyl-threonine phosphorylation" evidence=IEA]
[GO:0018105 "peptidyl-serine phosphorylation" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] [GO:0000784 "nuclear chromosome, telomeric
region" evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0003950 "NAD+ ADP-ribosyltransferase activity"
evidence=IEA] InterPro:IPR002110 InterPro:IPR001660
InterPro:IPR011510 InterPro:IPR012317 Pfam:PF00023 Pfam:PF00644
Pfam:PF07647 PRINTS:PR01415 PROSITE:PS50088 PROSITE:PS50105
PROSITE:PS51059 SMART:SM00248 SMART:SM00454 GO:GO:0008270
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0045944 GO:GO:0018105 GO:GO:0070198
GO:GO:0018107 Gene3D:1.10.150.50 InterPro:IPR013761 SUPFAM:SSF47769
GO:GO:0090263 GO:GO:0000209 GeneTree:ENSGT00700000104124
GO:GO:0000784 GO:GO:0003950 GO:GO:0043392 GO:GO:0032212
GO:GO:0070213 GO:GO:0070212 CTD:8658 KO:K10799 OMA:DDKEYQS
EMBL:AAEX03010429 RefSeq:XP_849388.1 Ensembl:ENSCAFT00000010746
GeneID:475603 KEGG:cfa:475603 NextBio:20851411 Uniprot:E2QU22
Length = 1327
Score = 130 (50.8 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 38/99 (38%), Positives = 53/99 (53%)
Query: 351 LLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLKTIMMETPLFFAV-KN 409
LL+HGA V+ Q+K GL LH AA G+ + L+ K C+N TPL A K
Sbjct: 856 LLEHGADVNAQDKGGLIPLHNAASYGHVD-IAALLIKYNTCVNATDKWAFTPLHEAAQKG 914
Query: 410 DHMVCAEVLLRWGANSEVLNLRRERPIDFAKSQDMRFLL 448
+CA +LL GA+ + N + P+D A + D+R LL
Sbjct: 915 RTQLCA-LLLAHGADPTMKNQEGQTPLDLATADDIRALL 952
Score = 119 (46.9 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 30/106 (28%), Positives = 59/106 (55%)
Query: 326 SALHCALKTSMGLSQHILQNRIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLI 385
+ALHCA+ S H + ++ +LL+ GA V+++NK +T LH+AA ++ +E ++
Sbjct: 524 TALHCAVA-----SLHPKRKQVTELLLRKGANVNEKNKDFMTPLHVAAERAHNDVME-VL 577
Query: 386 RKEPDCINLKTIMMETPLFFAVKNDHMVCAEVLLRWGANSEVLNLR 431
K +N + +T L A H+ +LL +G++ +++L+
Sbjct: 578 HKHGAKMNALDTLGQTALHRAALAGHLQTCRLLLSYGSDPSIISLQ 623
Score = 62 (26.9 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 18/45 (40%), Positives = 25/45 (55%)
Query: 86 LVNEVEESSGMTALHLAAES-HTAR--CVELLLKKRARTDIRSKD 127
++N + S TALH A S H R ELLL+K A + ++KD
Sbjct: 513 IINFKQPQSHETALHCAVASLHPKRKQVTELLLRKGANVNEKNKD 557
Score = 59 (25.8 bits), Expect = 6.5e-05, Sum P(2) = 6.5e-05
Identities = 17/47 (36%), Positives = 25/47 (53%)
Query: 81 LGPVALVNEVEESSGMTALHLAAESHTARCVELLLKKRARTDIRSKD 127
L P+ + + T LHLAA + R V+LLL+ A D+ +KD
Sbjct: 355 LTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGA--DVHAKD 399
>UNIPROTKB|O95271 [details] [associations]
symbol:TNKS "Tankyrase-1" species:9606 "Homo sapiens"
[GO:0007067 "mitosis" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0000139 "Golgi
membrane" evidence=IEA] [GO:0000775 "chromosome, centromeric
region" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0003950 "NAD+
ADP-ribosyltransferase activity" evidence=IDA] [GO:0000781
"chromosome, telomeric region" evidence=IDA] [GO:0005794 "Golgi
apparatus" evidence=IDA] [GO:0000209 "protein polyubiquitination"
evidence=IDA] [GO:0070213 "protein auto-ADP-ribosylation"
evidence=IDA] [GO:0090263 "positive regulation of canonical Wnt
receptor signaling pathway" evidence=IMP] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0018105 "peptidyl-serine phosphorylation"
evidence=IDA] [GO:0018107 "peptidyl-threonine phosphorylation"
evidence=IDA] [GO:0007052 "mitotic spindle organization"
evidence=TAS] [GO:0051225 "spindle assembly" evidence=TAS]
[GO:0000242 "pericentriolar material" evidence=TAS] [GO:0005643
"nuclear pore" evidence=TAS] [GO:0031965 "nuclear membrane"
evidence=TAS] [GO:0008270 "zinc ion binding" evidence=IDA]
[GO:0070212 "protein poly-ADP-ribosylation" evidence=IDA]
[GO:0006471 "protein ADP-ribosylation" evidence=IDA] [GO:0032210
"regulation of telomere maintenance via telomerase" evidence=IC]
[GO:0043392 "negative regulation of DNA binding" evidence=IDA]
[GO:0032212 "positive regulation of telomere maintenance via
telomerase" evidence=IMP;IDA] [GO:0000784 "nuclear chromosome,
telomeric region" evidence=IDA] [GO:0070198 "protein localization
to chromosome, telomeric region" evidence=IMP] InterPro:IPR002110
InterPro:IPR001660 InterPro:IPR011510 InterPro:IPR012317
Pfam:PF00023 Pfam:PF00644 Pfam:PF07647 PRINTS:PR01415
PROSITE:PS50088 PROSITE:PS50105 PROSITE:PS51059 SMART:SM00248
SMART:SM00454 GO:GO:0005794
Pathway_Interaction_DB:telomerasepathway GO:GO:0000139
GO:GO:0000775 GO:GO:0051301 GO:GO:0007067 GO:GO:0007052
GO:GO:0051225 GO:GO:0016055 GO:GO:0046872 eggNOG:COG0666
GO:GO:0015031 GO:GO:0008270 GO:GO:0031965 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
GO:GO:0045944 GO:GO:0005643 GO:GO:0018105 GO:GO:0070198
GO:GO:0018107 Gene3D:1.10.150.50 InterPro:IPR013761 SUPFAM:SSF47769
GO:GO:0000242 GO:GO:0000922 GO:GO:0090263 GO:GO:0000209
GO:GO:0051028 GO:GO:0000784 GO:GO:0003950 GO:GO:0043392
GO:GO:0032212 GO:GO:0070213 GO:GO:0070212 BRENDA:2.4.2.30
EMBL:AF082556 EMBL:AF082557 EMBL:AF082558 EMBL:AF082559
EMBL:AC103834 EMBL:AC103877 EMBL:AC104052 EMBL:AC021242
EMBL:BC098394 IPI:IPI00021493 IPI:IPI00221159 RefSeq:NP_003738.2
UniGene:Hs.370267 PDB:2RF5 PDB:3UDD PDB:3UH2 PDB:3UH4 PDB:4DVI
PDBsum:2RF5 PDBsum:3UDD PDBsum:3UH2 PDBsum:3UH4 PDBsum:4DVI
ProteinModelPortal:O95271 SMR:O95271 DIP:DIP-36652N IntAct:O95271
STRING:O95271 PhosphoSite:O95271 PaxDb:O95271 PRIDE:O95271
Ensembl:ENST00000310430 Ensembl:ENST00000518635 GeneID:8658
KEGG:hsa:8658 UCSC:uc003wss.3 CTD:8658 GeneCards:GC08P009450
H-InvDB:HIX0034248 HGNC:HGNC:11941 HPA:HPA025690 MIM:603303
neXtProt:NX_O95271 PharmGKB:PA36631 HOGENOM:HOG000246964
HOVERGEN:HBG059472 InParanoid:O95271 KO:K10799 OMA:DDKEYQS
OrthoDB:EOG45MN4H PhylomeDB:O95271 BindingDB:O95271
ChEMBL:CHEMBL6164 ChiTaRS:TNKS EvolutionaryTrace:O95271
GenomeRNAi:8658 NextBio:32469 ArrayExpress:O95271 Bgee:O95271
CleanEx:HS_TNKS Genevestigator:O95271 GermOnline:ENSG00000173273
Uniprot:O95271
Length = 1327
Score = 130 (50.8 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 38/99 (38%), Positives = 53/99 (53%)
Query: 351 LLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLKTIMMETPLFFAV-KN 409
LL+HGA V+ Q+K GL LH AA G+ + L+ K C+N TPL A K
Sbjct: 856 LLEHGADVNAQDKGGLIPLHNAASYGHVD-IAALLIKYNTCVNATDKWAFTPLHEAAQKG 914
Query: 410 DHMVCAEVLLRWGANSEVLNLRRERPIDFAKSQDMRFLL 448
+CA +LL GA+ + N + P+D A + D+R LL
Sbjct: 915 RTQLCA-LLLAHGADPTMKNQEGQTPLDLATADDIRALL 952
Score = 119 (46.9 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 30/106 (28%), Positives = 59/106 (55%)
Query: 326 SALHCALKTSMGLSQHILQNRIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLI 385
+ALHCA+ S H + ++ +LL+ GA V+++NK +T LH+AA ++ +E ++
Sbjct: 524 TALHCAVA-----SLHPKRKQVTELLLRKGANVNEKNKDFMTPLHVAAERAHNDVME-VL 577
Query: 386 RKEPDCINLKTIMMETPLFFAVKNDHMVCAEVLLRWGANSEVLNLR 431
K +N + +T L A H+ +LL +G++ +++L+
Sbjct: 578 HKHGAKMNALDTLGQTALHRAALAGHLQTCRLLLSYGSDPSIISLQ 623
Score = 62 (26.9 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 18/45 (40%), Positives = 25/45 (55%)
Query: 86 LVNEVEESSGMTALHLAAES-HTAR--CVELLLKKRARTDIRSKD 127
++N + S TALH A S H R ELLL+K A + ++KD
Sbjct: 513 IINFKQPQSHETALHCAVASLHPKRKQVTELLLRKGANVNEKNKD 557
Score = 59 (25.8 bits), Expect = 6.5e-05, Sum P(2) = 6.5e-05
Identities = 17/47 (36%), Positives = 25/47 (53%)
Query: 81 LGPVALVNEVEESSGMTALHLAAESHTARCVELLLKKRARTDIRSKD 127
L P+ + + T LHLAA + R V+LLL+ A D+ +KD
Sbjct: 355 LTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGA--DVHAKD 399
>UNIPROTKB|F1RX59 [details] [associations]
symbol:TNKS "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090263 "positive regulation of canonical Wnt receptor
signaling pathway" evidence=IEA] [GO:0070213 "protein
auto-ADP-ribosylation" evidence=IEA] [GO:0070212 "protein
poly-ADP-ribosylation" evidence=IEA] [GO:0070198 "protein
localization to chromosome, telomeric region" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043392 "negative
regulation of DNA binding" evidence=IEA] [GO:0032212 "positive
regulation of telomere maintenance via telomerase" evidence=IEA]
[GO:0018107 "peptidyl-threonine phosphorylation" evidence=IEA]
[GO:0018105 "peptidyl-serine phosphorylation" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] [GO:0000784 "nuclear chromosome, telomeric
region" evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0003950 "NAD+ ADP-ribosyltransferase activity"
evidence=IEA] InterPro:IPR002110 InterPro:IPR001660
InterPro:IPR011510 InterPro:IPR012317 Pfam:PF00023 Pfam:PF00644
Pfam:PF07647 PRINTS:PR01415 PROSITE:PS50088 PROSITE:PS50105
PROSITE:PS51059 SMART:SM00248 SMART:SM00454 GO:GO:0008270
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0045944 GO:GO:0018105 GO:GO:0070198
GO:GO:0018107 Gene3D:1.10.150.50 InterPro:IPR013761 SUPFAM:SSF47769
GO:GO:0090263 GO:GO:0000209 GeneTree:ENSGT00700000104124
GO:GO:0000784 GO:GO:0003950 GO:GO:0043392 GO:GO:0032212
GO:GO:0070213 GO:GO:0070212 CTD:8658 KO:K10799 OMA:DDKEYQS
EMBL:CU861946 EMBL:CU914407 EMBL:FP102456 RefSeq:XP_003133444.2
Ensembl:ENSSSCT00000017259 GeneID:100153228 KEGG:ssc:100153228
Uniprot:F1RX59
Length = 1327
Score = 130 (50.8 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 38/99 (38%), Positives = 53/99 (53%)
Query: 351 LLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLKTIMMETPLFFAV-KN 409
LL+HGA V+ Q+K GL LH AA G+ + L+ K C+N TPL A K
Sbjct: 856 LLEHGADVNAQDKGGLIPLHNAASYGHVD-IAALLIKYNTCVNATDKWAFTPLHEAAQKG 914
Query: 410 DHMVCAEVLLRWGANSEVLNLRRERPIDFAKSQDMRFLL 448
+CA +LL GA+ + N + P+D A + D+R LL
Sbjct: 915 RTQLCA-LLLAHGADPTMKNQEGQTPLDLATADDIRALL 952
Score = 119 (46.9 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 30/106 (28%), Positives = 59/106 (55%)
Query: 326 SALHCALKTSMGLSQHILQNRIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLI 385
+ALHCA+ S H + ++ +LL+ GA V+++NK +T LH+AA ++ +E ++
Sbjct: 524 TALHCAVA-----SLHPKRKQVTELLLRKGANVNEKNKDFMTPLHVAAERAHNDVME-VL 577
Query: 386 RKEPDCINLKTIMMETPLFFAVKNDHMVCAEVLLRWGANSEVLNLR 431
K +N + +T L A H+ +LL +G++ +++L+
Sbjct: 578 HKHGAKMNALDTLGQTALHRAALAGHLQTCRLLLSYGSDPSIISLQ 623
Score = 62 (26.9 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 18/45 (40%), Positives = 25/45 (55%)
Query: 86 LVNEVEESSGMTALHLAAES-HTAR--CVELLLKKRARTDIRSKD 127
++N + S TALH A S H R ELLL+K A + ++KD
Sbjct: 513 IINFKQPQSHETALHCAVASLHPKRKQVTELLLRKGANVNEKNKD 557
Score = 59 (25.8 bits), Expect = 6.5e-05, Sum P(2) = 6.5e-05
Identities = 17/47 (36%), Positives = 25/47 (53%)
Query: 81 LGPVALVNEVEESSGMTALHLAAESHTARCVELLLKKRARTDIRSKD 127
L P+ + + T LHLAA + R V+LLL+ A D+ +KD
Sbjct: 355 LTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGA--DVHAKD 399
>FB|FBgn0001215 [details] [associations]
symbol:Hrb98DE "Heterogeneous nuclear ribonucleoprotein at
98DE" species:7227 "Drosophila melanogaster" [GO:0030529
"ribonucleoprotein complex" evidence=ISS;NAS;IDA;IPI] [GO:0003729
"mRNA binding" evidence=ISS;NAS] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001745 "compound eye morphogenesis"
evidence=IGI] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0000381 "regulation of alternative mRNA splicing,
via spliceosome" evidence=IMP] [GO:0005703 "polytene chromosome
puff" evidence=IDA] [GO:0033119 "negative regulation of RNA
splicing" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA]
[GO:0045727 "positive regulation of translation" evidence=IMP]
[GO:0048477 "oogenesis" evidence=IMP] [GO:0036099 "female germ-line
stem cell maintenance" evidence=IMP] [GO:0048027 "mRNA 5'-UTR
binding" evidence=IDA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 EMBL:AE014297
GO:GO:0005634 GO:GO:0000166 GO:GO:0043565 Gene3D:3.30.70.330
GO:GO:0048477 GO:GO:0048027 GO:GO:0030529 GO:GO:0033119
GO:GO:0045727 eggNOG:COG0724 GO:GO:0005703 GO:GO:0000381
GeneTree:ENSGT00700000104255 GO:GO:0036099 KO:K12741
OrthoDB:EOG46WWRF EMBL:M15766 EMBL:M25545 EMBL:M28871 EMBL:M28872
EMBL:M33955 EMBL:M31560 EMBL:M28870 EMBL:AY061448 PIR:A26459
RefSeq:NP_524543.1 RefSeq:NP_733249.1 RefSeq:NP_733250.1
RefSeq:NP_733251.1 RefSeq:NP_733252.1 RefSeq:NP_733253.1
UniGene:Dm.7147 ProteinModelPortal:P07909 SMR:P07909 DIP:DIP-19217N
IntAct:P07909 MINT:MINT-764040 STRING:P07909 PaxDb:P07909
PRIDE:P07909 EnsemblMetazoa:FBtr0085300 EnsemblMetazoa:FBtr0085301
GeneID:43385 KEGG:dme:Dmel_CG9983 CTD:43385 FlyBase:FBgn0001215
InParanoid:P07909 OMA:INIVIDK PhylomeDB:P07909 ChiTaRS:Hrb98DE
GenomeRNAi:43385 NextBio:833644 Bgee:P07909 GermOnline:CG9983
Uniprot:P07909
Length = 365
Score = 132 (51.5 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 33/86 (38%), Positives = 49/86 (56%)
Query: 545 EFKSKIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKHEKS 604
E K+F+GGL + ++L +FEK +G I D V + K+S RGFGF+T+ H
Sbjct: 28 EHMRKLFIGGLDYRTTDENLKAHFEK-WGNIVDVVVMKDPRTKRS--RGFGFITYSHSSM 84
Query: 605 AAAAVQARFVTIMGKEVEIKSAVPKE 630
A ++R I G+ VE K AVP++
Sbjct: 85 IDEAQKSRPHKIDGRVVEPKRAVPRQ 110
>TAIR|locus:2168848 [details] [associations]
symbol:AT5G40490 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0008150 "biological_process" evidence=ND] [GO:0005829 "cytosol"
evidence=IDA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0005829 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 GO:GO:0030529 EMBL:AB009052 HOGENOM:HOG000234441
HSSP:Q61474 KO:K12741 eggNOG:NOG289504 EMBL:AY136466
IPI:IPI00518075 RefSeq:NP_198865.1 UniGene:At.30284
ProteinModelPortal:Q9FM47 SMR:Q9FM47 PaxDb:Q9FM47 PRIDE:Q9FM47
EnsemblPlants:AT5G40490.1 GeneID:834047 KEGG:ath:AT5G40490
TAIR:At5g40490 InParanoid:Q9FM47 OMA:YESEDMV PhylomeDB:Q9FM47
ProtClustDB:CLSN2916909 ArrayExpress:Q9FM47 Genevestigator:Q9FM47
Uniprot:Q9FM47
Length = 423
Score = 133 (51.9 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 32/91 (35%), Positives = 53/91 (58%)
Query: 542 STQEFKSK-IFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFK 600
S+ +FK+K IFVGG+P +D D +F + FG +++ ++ + SRGFGFVT++
Sbjct: 123 SSNDFKTKKIFVGGIPSSVDDDEFKEFFMQ-FGELKEHQI--MRDHSTGRSRGFGFVTYE 179
Query: 601 HEKSAAAAV-QARFVTIMGKEVEIKSAVPKE 630
E + + + + G +VEIK A PK+
Sbjct: 180 SEDMVDHLLAKGNRIELSGTQVEIKKAEPKK 210
>ZFIN|ZDB-GENE-020507-2 [details] [associations]
symbol:invs "inversin" species:7955 "Danio rerio"
[GO:0001822 "kidney development" evidence=IMP] [GO:0060027
"convergent extension involved in gastrulation" evidence=IGI]
[GO:0005516 "calmodulin binding" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0010171 "body morphogenesis" evidence=IMP] [GO:0035844 "cloaca
development" evidence=IGI] [GO:0072114 "pronephros morphogenesis"
evidence=IGI] [GO:0072372 "primary cilium" evidence=IDA]
[GO:0072116 "pronephros formation" evidence=IGI] [GO:0001947 "heart
looping" evidence=IGI] InterPro:IPR002110 InterPro:IPR000048
Pfam:PF00023 PROSITE:PS50088 PROSITE:PS50096 SMART:SM00015
SMART:SM00248 ZFIN:ZDB-GENE-020507-2 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
GO:GO:0010171 GO:GO:0072372 GO:GO:0035844 GO:GO:0001947
GO:GO:0060027 HOVERGEN:HBG083788 GO:GO:0072116 EMBL:BC162518
IPI:IPI00512719 UniGene:Dr.32732 ProteinModelPortal:B3DGU0
STRING:B3DGU0 ArrayExpress:B3DGU0 Uniprot:B3DGU0
Length = 1025
Score = 106 (42.4 bits), Expect = 3.4e-05, Sum P(3) = 3.4e-05
Identities = 45/165 (27%), Positives = 80/165 (48%)
Query: 291 PLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKTSMGLSQHILQNRIVGI 350
PL A + G DVI L+K G+SALH A ++G + + + +
Sbjct: 386 PLFRACEMGHRDVILTLIKG---GARVDLVDIDGHSALHWA---ALGGNAEVCE-----V 434
Query: 351 LLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLKTIMMETPLFFAVKND 410
L+++G + Q++ G T L AA +G + LI+ + D N++ T L ++ N
Sbjct: 435 LMENGISPNLQDQAGRTPLQCAAYAGYINCMALLIQHDADP-NIQDKEGRTALHWSCNNG 493
Query: 411 HMVCAEVLLRWGANSEVLNLRRER--PIDFA---KSQDM-RFLLK 449
++ ++LL GA + ER P+D+A + Q++ +FLL+
Sbjct: 494 YLDAVKLLLGCGAFPNHMEHTEERYTPLDYALLGEHQELTQFLLE 538
Score = 79 (32.9 bits), Expect = 3.4e-05, Sum P(3) = 3.4e-05
Identities = 24/64 (37%), Positives = 34/64 (53%)
Query: 65 CIF-DSVSCATSLVNGDLGPVALVNEVEESSGMTALHLAAESHTARCVELLLKKRARTDI 123
C+ D + CA L+ A +N+ + S TALHLAA+ R ++LLL + A D
Sbjct: 48 CVLADRLDCAEVLLKAG----AAINKTDHSQ-RTALHLAAQKGNVRFMKLLLSRHA--DW 100
Query: 124 RSKD 127
R KD
Sbjct: 101 RLKD 104
Score = 51 (23.0 bits), Expect = 3.4e-05, Sum P(3) = 3.4e-05
Identities = 20/101 (19%), Positives = 43/101 (42%)
Query: 798 AGPI--GKNGSPNHMVLVPSPPKQKWGALQLSKNGNPSSPV-NSASDSNECDRNDSKSPQ 854
A P+ G + +P HM P+P + SKN + +P N +++ ++ S+
Sbjct: 731 AKPVHTGTHVAPGHMETTPTPKPRPSTTGAHSKNASQDTPQHNETQTTSKGNKPISEHKP 790
Query: 855 DLRSVSISSTIERKPTNEVPKGSSSQRDTSTSAISASKKVI 895
S ++++ R+ K + ++D S K+ +
Sbjct: 791 TGSQPSNNTSVTRQKEKRQEKETHREKD-KRSRTEGDKQTV 830
Score = 42 (19.8 bits), Expect = 0.00026, Sum P(3) = 0.00026
Identities = 12/64 (18%), Positives = 26/64 (40%)
Query: 833 SSPVNSASDSNECDRNDSKSPQDLRSVSISSTIERKPTNEVPKGSSSQRDTSTSAISASK 892
S P N+ S + + ++ K + + +++ E KG+ +RD K
Sbjct: 793 SQPSNNTSVTRQKEKRQEKETHREKDKRSRTEGDKQTVREKQKGTGIERDKERLMGRTRK 852
Query: 893 KVID 896
K+ +
Sbjct: 853 KLAE 856
>UNIPROTKB|F8VZ49 [details] [associations]
symbol:HNRNPA1 "Heterogeneous nuclear ribonucleoprotein A1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0045111
"intermediate filament cytoskeleton" evidence=IDA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005737 GO:GO:0005730 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0045111 EMBL:AC078778
HGNC:HGNC:5031 ChiTaRS:HNRNPA1 IPI:IPI01022460
ProteinModelPortal:F8VZ49 SMR:F8VZ49 PRIDE:F8VZ49
Ensembl:ENST00000548688 ArrayExpress:F8VZ49 Bgee:F8VZ49
Uniprot:F8VZ49
Length = 231
Score = 127 (49.8 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 33/82 (40%), Positives = 47/82 (57%)
Query: 549 KIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKHEKSAAAA 608
K+F+GGL F +SL +FE+ +G + D V K+S RGFGFVT+ + AA
Sbjct: 34 KLFIGGLSFETTDESLRSHFEQ-WGTLTDCVVMRDPNTKRS--RGFGFVTYATVEEVDAA 90
Query: 609 VQARFVTIMGKEVEIKSAVPKE 630
+ AR + G+ VE K AV +E
Sbjct: 91 MNARPHKVDGRVVEPKRAVSRE 112
Score = 117 (46.2 bits), Expect = 0.00050, P = 0.00050
Identities = 32/92 (34%), Positives = 47/92 (51%)
Query: 549 KIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQS-VSRGFGFVTFKHEKSAAA 607
KIFVGG+ + L YFE+ +G IE V E T++ S RGF FVTF S
Sbjct: 125 KIFVGGIKEDTEEHHLRDYFEQ-YGKIE---VIEIMTDRGSGKKRGFAFVTFDDHDSVDK 180
Query: 608 AVQARFVTIMGKEVEIKSAVPKEVLFAELQKQ 639
V ++ T+ G E++ A+ K+ + + Q
Sbjct: 181 IVIQKYHTVNGHNCEVRKALSKQEMASASSSQ 212
>UNIPROTKB|E1BZE6 [details] [associations]
symbol:LOC100859627 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005730
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0071013
GeneTree:ENSGT00700000104376 OMA:QGHDPKE EMBL:AADN02020007
EMBL:AADN02020008 EMBL:AADN02020009 EMBL:AADN02020010
EMBL:AADN02020011 EMBL:AADN02020012 EMBL:AADN02020013
IPI:IPI00812068 ProteinModelPortal:E1BZE6
Ensembl:ENSGALT00000038715 Uniprot:E1BZE6
Length = 380
Score = 132 (51.5 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 35/82 (42%), Positives = 47/82 (57%)
Query: 549 KIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKHEKSAAAA 608
K+F+GGL F DSL +FEK +G + D V K+S RGFGFVT+ + AA
Sbjct: 34 KLFIGGLSFETTDDSLREHFEK-WGTLTDCVVMRDPQTKRS--RGFGFVTYSCVEEVDAA 90
Query: 609 VQARFVTIMGKEVEIKSAVPKE 630
+ AR + G+ VE K AV +E
Sbjct: 91 MSARPHKVDGRVVEPKRAVSRE 112
Score = 127 (49.8 bits), Expect = 0.00012, P = 0.00012
Identities = 37/96 (38%), Positives = 52/96 (54%)
Query: 549 KIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQS-VSRGFGFVTFKHEKSAAA 607
KIFVGG+ + +L YFEK +G IE V E ++QS RGF FVTF +
Sbjct: 125 KIFVGGIKEDTEEYNLREYFEK-YGKIETIEVME---DRQSGKKRGFAFVTFDDHDTVDK 180
Query: 608 AVQARFVTIMGKEVEIKSAVPKEVLFAELQKQSAQQ 643
V ++ TI G E+K A+ K+ E+Q S+Q+
Sbjct: 181 IVVQKYHTINGHNCEVKKALSKQ----EMQTASSQR 212
>UNIPROTKB|G5E5T9 [details] [associations]
symbol:GABPB1 "GA-binding protein subunit beta-1"
species:9913 "Bos taurus" [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR002110 Pfam:PF13606 PRINTS:PR01415 PROSITE:PS50088
SMART:SM00248 GO:GO:0005634 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0045944
GO:GO:0044212 GeneTree:ENSGT00660000095543 EMBL:DAAA02029071
EMBL:DAAA02029072 Ensembl:ENSBTAT00000030952 OMA:GCALAMK
Uniprot:G5E5T9
Length = 232
Score = 127 (49.8 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 44/175 (25%), Positives = 83/175 (47%)
Query: 288 VGPPLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKTSMGLSQHILQNRI 347
+G L+ A +AG +D + IL+ + G S LH A + H +
Sbjct: 6 LGKKLLEAARAGQDDEVRILMAN----GAPFTTDWLGTSPLHLAAQYG-----HYSTTEV 56
Query: 348 VGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLKTIMMETPLFFAV 407
LL+ G + K+ T LH+AA G++ +E L++ D +N K ++ T L +A
Sbjct: 57 ---LLRAGVSRDARTKVDRTPLHMAASEGHASIVEVLLKHGAD-VNAKDMLKMTALHWAT 112
Query: 408 KNDHMVCAEVLLRWGANSEVLNLRRERPIDFA---KSQDMRFLLKAA--NTCHTN 457
+++H E+L+++GA+ + + D + ++D+ +L+ A N +TN
Sbjct: 113 EHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEILQIAMQNQINTN 167
>UNIPROTKB|A6QLV0 [details] [associations]
symbol:RIPK4 "RIPK4 protein" species:9913 "Bos taurus"
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0002009 "morphogenesis of an epithelium"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004674
"protein serine/threonine kinase activity" evidence=IEA]
InterPro:IPR002110 InterPro:IPR000719 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00023 Pfam:PF00069
PRINTS:PR01415 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
PROSITE:PS50088 SMART:SM00248 GO:GO:0005524 GO:GO:0005634
GO:GO:0002009 GO:GO:0005737 eggNOG:COG0515 SUPFAM:SSF56112
GO:GO:0004674 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 HOGENOM:HOG000294086
HOVERGEN:HBG061582 GeneTree:ENSGT00550000074536 OMA:DLRFRII
CTD:54101 KO:K08848 OrthoDB:EOG4XD3QJ EMBL:DAAA02003251
EMBL:BC148094 IPI:IPI00708028 RefSeq:NP_001093797.1
UniGene:Bt.13870 Ensembl:ENSBTAT00000028318 GeneID:508668
KEGG:bta:508668 InParanoid:A6QLV0 NextBio:20868626 Uniprot:A6QLV0
Length = 785
Score = 110 (43.8 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 43/159 (27%), Positives = 67/159 (42%)
Query: 282 SCTDKKVGPPLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKTSMGLSQH 341
+ D+ L A Q GDE + +LL+ G + +H A QH
Sbjct: 499 NAADEDQWTALHFAAQNGDEGSMRLLLEKNASVHEADCE---GRTPMHVAC-------QH 548
Query: 342 ILQNRIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDC-INLKTIMME 400
Q +V ILL+ G K LH AA G+ ++ L+ K+P ++ +T+
Sbjct: 549 G-QEGVVRILLRRGVDAGLPGKDAWVPLHYAAWQGHLPIVK-LLAKQPGVSVDAQTLDGR 606
Query: 401 TPLFFAVKNDHMVCAEVLLRWGANSEVLNLRRERPIDFA 439
TPL A + H A VL+ ++ V NL + P+ A
Sbjct: 607 TPLHLAAQRGHYRVARVLIDLHSDVNVCNLLAQTPLHVA 645
Score = 105 (42.0 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 43/139 (30%), Positives = 61/139 (43%)
Query: 291 PLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKTSMGLSQHILQNRIVGI 350
P+ +A Q G E V+ ILL+ LH A G H+ IV +
Sbjct: 541 PMHVACQHGQEGVVRILLRRGVDAGLPGKDAWV---PLHYA--AWQG---HL---PIVKL 589
Query: 351 LLKH-GAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLKTIMMETPLFFAVKN 409
L K G V Q G T LH+AA G+ + LI D +N+ ++ +TPL A +
Sbjct: 590 LAKQPGVSVDAQTLDGRTPLHLAAQRGHYRVARVLIDLHSD-VNVCNLLAQTPLHVAAET 648
Query: 410 DHMVCAEVLLRWGANSEVL 428
H A +LL GA+ E +
Sbjct: 649 GHTSTARLLLHRGAHREAV 667
Score = 102 (41.0 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 37/141 (26%), Positives = 62/141 (43%)
Query: 291 PLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKTSMGLSQHILQNRIVGI 350
PL +A + G +LL G +ALH A + H+ V +
Sbjct: 641 PLHVAAETGHTSTARLLLHR---GAHREAVTAEGCTALHLAARNG-----HLAT---VKL 689
Query: 351 LLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLKTIMMETPLFFAVKND 410
L++ A + + TALH+AA G+S+ +E+L+ D ++L + L A +
Sbjct: 690 LVEERANMLARGPRSQTALHLAAAGGHSEVVEELV--SADVLDLSDEQGLSALHLAAQGR 747
Query: 411 HMVCAEVLLRWGANSEVLNLR 431
H E LLR GA+ + +L+
Sbjct: 748 HTKTVETLLRHGAHVNLQSLK 768
Score = 77 (32.2 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 32/126 (25%), Positives = 52/126 (41%)
Query: 7 SYTAAPSVTDLETTLI-----INSLLEDDKKQLINVSKRHFIDNSLDNADQQTAIVTKLL 61
S+ PS DL TT I +++++ D +L+ + + +D LD LL
Sbjct: 391 SFEREPSTNDLGTTDIQKKKLVDAIVSGDTSRLMKILQPQDVDLVLDGG-------ASLL 443
Query: 62 RVSCIFDSVSCATSLVNGDLGPVALVNEVEESSGMTALHLAAESHTARCVELLLKKRART 121
++ C L+ + P L N G T LH+A E VELLL ++
Sbjct: 444 HLAVEAGQEDCVKWLLLNNANP-NLTNR----RGSTPLHVAVEKRVRGIVELLLARKISV 498
Query: 122 DIRSKD 127
+ +D
Sbjct: 499 NAADED 504
>UNIPROTKB|F1P6P1 [details] [associations]
symbol:ANK2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0086005 "regulation of ventricular cardiac
muscle cell action potential" evidence=IEA] [GO:0072661 "protein
targeting to plasma membrane" evidence=IEA] [GO:0070972 "protein
localization to endoplasmic reticulum" evidence=IEA] [GO:0060307
"regulation of ventricular cardiac muscle cell membrane
repolarization" evidence=IEA] [GO:0060048 "cardiac muscle
contraction" evidence=IEA] [GO:0051928 "positive regulation of
calcium ion transport" evidence=IEA] [GO:0051117 "ATPase binding"
evidence=IEA] [GO:0050821 "protein stabilization" evidence=IEA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0044325 "ion channel binding" evidence=IEA] [GO:0043268
"positive regulation of potassium ion transport" evidence=IEA]
[GO:0043034 "costamere" evidence=IEA] [GO:0034394 "protein
localization to cell surface" evidence=IEA] [GO:0033292 "T-tubule
organization" evidence=IEA] [GO:0031430 "M band" evidence=IEA]
[GO:0030674 "protein binding, bridging" evidence=IEA] [GO:0030507
"spectrin binding" evidence=IEA] [GO:0030315 "T-tubule"
evidence=IEA] [GO:0030018 "Z disc" evidence=IEA] [GO:0019901
"protein kinase binding" evidence=IEA] [GO:0016323 "basolateral
plasma membrane" evidence=IEA] [GO:0015459 "potassium channel
regulator activity" evidence=IEA] [GO:0014704 "intercalated disc"
evidence=IEA] [GO:0010881 "regulation of cardiac muscle contraction
by regulation of the release of sequestered calcium ion"
evidence=IEA] [GO:0010628 "positive regulation of gene expression"
evidence=IEA] [GO:0006874 "cellular calcium ion homeostasis"
evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=IEA] [GO:0003283 "atrial septum development" evidence=IEA]
[GO:2001259 "positive regulation of cation channel activity"
evidence=IEA] [GO:1901021 "positive regulation of calcium ion
transmembrane transporter activity" evidence=IEA] [GO:1901018
"positive regulation of potassium ion transmembrane transporter
activity" evidence=IEA] [GO:0086091 "regulation of heart rate by
cardiac conduction" evidence=IEA] [GO:0086015 "regulation of SA
node cell action potential" evidence=IEA] [GO:0086014 "regulation
of atrial cardiac muscle cell action potential" evidence=IEA]
InterPro:IPR000488 Pfam:PF00531 InterPro:IPR002110 Pfam:PF00023
PRINTS:PR01415 PROSITE:PS50017 PROSITE:PS50088 SMART:SM00005
SMART:SM00248 GO:GO:0005737 GO:GO:0005887 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
GO:GO:0016323 GO:GO:0060048 GO:GO:0010628 Gene3D:1.10.533.10
InterPro:IPR011029 SUPFAM:SSF47986 GO:GO:0002027 GO:GO:0034394
InterPro:IPR000906 Pfam:PF00791 SMART:SM00218 PROSITE:PS51145
GeneTree:ENSGT00700000104348 GO:GO:0003283 GO:GO:0070972
GO:GO:0086014 GO:GO:0010881 GO:GO:0086005 GO:GO:0060307
GO:GO:0086070 EMBL:AAEX03016833 EMBL:AAEX03016831 EMBL:AAEX03016832
Ensembl:ENSCAFT00000018779 OMA:IVSKQYT Uniprot:F1P6P1
Length = 3863
Score = 125 (49.1 bits), Expect = 3.6e-05, Sum P(3) = 3.6e-05
Identities = 49/166 (29%), Positives = 70/166 (42%)
Query: 275 FGAVANGSCTDKKVGPPLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKT 334
+GA N K+ PL LA+Q G D++ +LL G ++LH A
Sbjct: 592 YGAETN--IVTKQGVTPLHLASQEGHTDMVTLLLDK---GANIHMSTKSGLTSLHLA--- 643
Query: 335 SMGLSQHILQNRIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINL 394
+Q N + IL KHGA KLG T L +A GN + + L+++ + +N
Sbjct: 644 ----AQEDKVN-VADILTKHGADQDAHTKLGYTPLIVACHYGNVKMVNFLLKQGAN-VNA 697
Query: 395 KTIMMETPLFFAVKNDHMVCAEVLLRWGANSEVLNLRRERPIDFAK 440
KT TPL A + H VLL+ GA + AK
Sbjct: 698 KTKNGYTPLHQAAQQGHTHIINVLLQHGAKPNATTANGNTALAIAK 743
Score = 76 (31.8 bits), Expect = 3.6e-05, Sum P(3) = 3.6e-05
Identities = 25/86 (29%), Positives = 38/86 (44%)
Query: 47 LDNADQQTAIVTKLLRVSCIFDSVSCATSLV----NGDLGPVALVNEVEESSGMTALHLA 102
L+N D + + L ++ D A L+ N D+ +VN ES G T LH+A
Sbjct: 124 LEN-DTKGKVRLPALHIAARKDDTKSAALLLQNDHNADVQSKMMVNRTTES-GFTPLHIA 181
Query: 103 AESHTARCVELLLKKRARTDIRSKDG 128
A LLL + A D +++G
Sbjct: 182 AHYGNVNVATLLLNRGAAVDFTARNG 207
Score = 73 (30.8 bits), Expect = 0.00062, Sum P(5) = 0.00062
Identities = 20/68 (29%), Positives = 38/68 (55%)
Query: 61 LRVSCIFDSVSCATSLVNGDLGPVALVNEVEESSGMTALHLAAESHTARCVELLLKKRAR 120
L ++ + +V+ AT L+N A V + +G+T LH+A++ V+LLL + +
Sbjct: 178 LHIAAHYGNVNVATLLLNRG----AAV-DFTARNGITPLHVASKRGNTNMVKLLLDRGGQ 232
Query: 121 TDIRSKDG 128
D +++DG
Sbjct: 233 IDAKTRDG 240
Score = 52 (23.4 bits), Expect = 3.6e-05, Sum P(3) = 3.6e-05
Identities = 23/74 (31%), Positives = 32/74 (43%)
Query: 809 HMVLVPSPPKQKWGALQLSKNGNPSSPVNSASDSNECDRNDSKSPQDLRSVSISST-IER 867
H + PS +K + S SPV+S+S + E S S + R +SST ER
Sbjct: 1749 HPPISPSSKTEKHSPVSPSAKIERHSPVSSSSKT-EKHSPVSPSTKTERHSPVSSTKTER 1807
Query: 868 KPTNEVPKGSSSQR 881
P P G +R
Sbjct: 1808 HPPVS-PSGKMDKR 1820
Score = 51 (23.0 bits), Expect = 0.00033, Sum P(5) = 0.00033
Identities = 23/72 (31%), Positives = 30/72 (41%)
Query: 556 PFFLDSDSLGGY--FEKHFGPIE-DARVAEF--QTEKQSVSRGF-GFVTFKHEKSAAAAV 609
P + D GY F+ E D+ E QT K+ V + F G E+S+
Sbjct: 3617 PIVSEEDISVGYSTFQDCIPKAEGDSSATELFPQTHKEQVQQDFSGKTQGLPEESSLECQ 3676
Query: 610 QARFVTIMGKEV 621
Q FVT G EV
Sbjct: 3677 QEYFVTTPGTEV 3688
Score = 47 (21.6 bits), Expect = 0.00022, Sum P(5) = 0.00022
Identities = 11/40 (27%), Positives = 19/40 (47%)
Query: 459 AFLNQEKQNASLESDEDISGTCEALLSMVDDNSNTERICS 498
A L+ ++ L+ ++D G+C LL+ TE S
Sbjct: 2216 ATLDPSSEDTCLKREDDSLGSCSVLLAKETPKGLTEEASS 2255
Score = 46 (21.3 bits), Expect = 0.00022, Sum P(5) = 0.00022
Identities = 16/42 (38%), Positives = 20/42 (47%)
Query: 840 SDSNECDRNDSKSPQDLRSVSISSTIERKPTNEVPKGSSSQR 881
SD N+ D DS SP++ RSV I P VP S +
Sbjct: 3174 SDRND-DSPDS-SPEEQRSVI---EIPTAPMENVPSAESKSK 3210
Score = 44 (20.5 bits), Expect = 0.00022, Sum P(5) = 0.00022
Identities = 25/113 (22%), Positives = 48/113 (42%)
Query: 619 KEVEIKSAVPKEVLFA---ELQKQSAQQQESKHEHQARLGAKIP----DERTM-EQIISR 670
+EV+ + V K+ F + Q++S + +E K +H++ + + P D M + + R
Sbjct: 2614 EEVQFQPIVSKQYTFKMNEDTQEESGKSEEEK-DHESCVPEESPTISPDGPDMFDDDLDR 2672
Query: 671 NAXXXXXXXXXXXXMPCRRVTEEATAEKSWAGRLLYGQPKTSSNESQAYLVES 723
+A C + ++ +G LY P+ +NE Q ES
Sbjct: 2673 DAAQTEVCDGHG----CETGSPGSSVTPISSG--LYSSPREDTNEQQVIHEES 2719
Score = 43 (20.2 bits), Expect = 0.00041, Sum P(4) = 0.00041
Identities = 26/91 (28%), Positives = 37/91 (40%)
Query: 749 RHPLEGKYALSSLKTDFKAVCGLELDHAS-LGYSKLSDFLRTLPDLCHVKAGPIGKNGSP 807
R+ LEG + SL++ F + L HAS L S + D +P H + + K
Sbjct: 829 RYSLEGARS-DSLRS-FSSDRSHTLSHASYLRDSAMIDDTMVIPS--H-QVSTLAKEAER 883
Query: 808 NHMVLVPSPPKQKWGALQLSKNGNPSSPVNS 838
N L WG L SSP++S
Sbjct: 884 NSYRL-------SWGTENLDNVALSSSPIHS 907
Score = 42 (19.8 bits), Expect = 0.00094, Sum P(5) = 0.00094
Identities = 18/66 (27%), Positives = 27/66 (40%)
Query: 832 PSSPVNSASDSNECDRN-DSKSPQDLRSVSISSTIERKPTNEVPKGSSSQRDTSTSAISA 890
P +S+S + D D + + SV S + T+E K SSS S ++
Sbjct: 2523 PKQEESSSSSDPDADYTADVDESKHMESVEDESDVPVVVTSESRKASSSSE--SEPELAQ 2580
Query: 891 SKKVID 896
KK D
Sbjct: 2581 LKKGAD 2586
Score = 41 (19.5 bits), Expect = 0.00041, Sum P(5) = 0.00041
Identities = 10/30 (33%), Positives = 18/30 (60%)
Query: 620 EVEIKSAVPKEVLFAELQKQSAQQQESKHE 649
E E+ V K F EL++++ Q+++ K E
Sbjct: 2493 EEEMFKMVTKIKTFDELEQEAKQKRDYKKE 2522
Score = 40 (19.1 bits), Expect = 0.00050, Sum P(5) = 0.00050
Identities = 7/37 (18%), Positives = 21/37 (56%)
Query: 633 FAELQKQSAQQQESKHEHQARLGAKIPDERTMEQIIS 669
F ++ ++S ++ S+ + GA++P + T + ++
Sbjct: 3038 FFQIGQESREETVSEDMKEGSPGAELPQQETSAESLA 3074
Score = 40 (19.1 bits), Expect = 0.00054, Sum P(3) = 0.00054
Identities = 15/75 (20%), Positives = 29/75 (38%)
Query: 795 HVKAGPIGKNGSPNHMVLVPSPPKQKWGALQLSKNGNPSSPVNSASDSNECDRNDSKSPQ 854
H P K + H + PS ++ + S SPV+ ++ + S +
Sbjct: 1749 HPPISPSSK--TEKHSPVSPSAKIERHSPVSSSSKTEKHSPVSPSTKTERHSPVSSTKTE 1806
Query: 855 DLRSVSISSTIERKP 869
VS S ++++P
Sbjct: 1807 RHPPVSPSGKMDKRP 1821
Score = 37 (18.1 bits), Expect = 0.00033, Sum P(5) = 0.00033
Identities = 9/27 (33%), Positives = 13/27 (48%)
Query: 709 PKTSSNESQAYLVESFEEKSMPKWLRT 735
P T +E+Q ES P+ +RT
Sbjct: 3684 PGTEVSETQKPTAESASPSKTPEEIRT 3710
>UNIPROTKB|P16157 [details] [associations]
symbol:ANK1 "Ankyrin-1" species:9606 "Homo sapiens"
[GO:0007165 "signal transduction" evidence=IEA] [GO:0006779
"porphyrin-containing compound biosynthetic process" evidence=IEA]
[GO:0015672 "monovalent inorganic cation transport" evidence=IEA]
[GO:0030863 "cortical cytoskeleton" evidence=IEA] [GO:0048821
"erythrocyte development" evidence=IEA] [GO:0016529 "sarcoplasmic
reticulum" evidence=IEA] [GO:0031430 "M band" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IDA;NAS] [GO:0005198
"structural molecule activity" evidence=NAS] [GO:0007010
"cytoskeleton organization" evidence=NAS] [GO:0030507 "spectrin
binding" evidence=IDA;NAS;IPI] [GO:0016323 "basolateral plasma
membrane" evidence=NAS] [GO:0008093 "cytoskeletal adaptor activity"
evidence=IDA;TAS] [GO:0045199 "maintenance of epithelial cell
apical/basal polarity" evidence=TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0019899 "enzyme binding" evidence=TAS;IPI]
[GO:0005856 "cytoskeleton" evidence=NAS] [GO:0006887 "exocytosis"
evidence=NAS] [GO:0005200 "structural constituent of cytoskeleton"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0007411 "axon
guidance" evidence=TAS] [GO:0014731 "spectrin-associated
cytoskeleton" evidence=IDA] [GO:0051117 "ATPase binding"
evidence=IPI] [GO:0072661 "protein targeting to plasma membrane"
evidence=IMP] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=IDA] InterPro:IPR000488 Pfam:PF00531 InterPro:IPR002110
Pfam:PF00023 PRINTS:PR01415 PROSITE:PS50017 PROSITE:PS50088
SMART:SM00005 SMART:SM00248 EMBL:U50092 GO:GO:0005829
Reactome:REACT_111045 GO:GO:0007411 GO:GO:0007165 GO:GO:0007010
GO:GO:0031430 EMBL:CH471080 GO:GO:0030863 GO:GO:0014731
GO:GO:0030507 GO:GO:0005200 eggNOG:COG0666 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0016323
GO:GO:0019899 GO:GO:0006779 GO:GO:0008093 GO:GO:0006887
GO:GO:0006888 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
GO:GO:0016529 EMBL:X16609 EMBL:M28880 EMBL:U50133 EMBL:U50093
EMBL:U50094 EMBL:U50095 EMBL:U50096 EMBL:U50097 EMBL:U50098
EMBL:U50099 EMBL:U50100 EMBL:U50101 EMBL:U50102 EMBL:U50103
EMBL:U50104 EMBL:U50105 EMBL:U50106 EMBL:U50107 EMBL:U50108
EMBL:U50109 EMBL:U50110 EMBL:U50111 EMBL:U50112 EMBL:U50113
EMBL:U50114 EMBL:U50115 EMBL:U50116 EMBL:U50117 EMBL:U50118
EMBL:U50119 EMBL:U50120 EMBL:U50121 EMBL:U50122 EMBL:U50123
EMBL:U50124 EMBL:U50125 EMBL:U50126 EMBL:U50127 EMBL:U50128
EMBL:U50129 EMBL:U50130 EMBL:U50131 EMBL:U50132 EMBL:AF005213
EMBL:AB209418 EMBL:AK223578 EMBL:AC027702 EMBL:AC113133
EMBL:BC030957 EMBL:BC117121 IPI:IPI00007623 IPI:IPI00007625
IPI:IPI00216697 IPI:IPI00297532 IPI:IPI00374973 IPI:IPI00646300
IPI:IPI00654646 IPI:IPI00743884 IPI:IPI00744408 IPI:IPI00744846
IPI:IPI00744895 IPI:IPI00744986 IPI:IPI00745348 IPI:IPI00747536
IPI:IPI00747552 IPI:IPI00748074 IPI:IPI00748154 IPI:IPI00748330
IPI:IPI00748439 IPI:IPI00748895 IPI:IPI00749301 PIR:A35049
PIR:S08275 RefSeq:NP_000028.3 RefSeq:NP_001135918.1
RefSeq:NP_065208.2 RefSeq:NP_065209.2 RefSeq:NP_065210.2
UniGene:Hs.654438 UniGene:Hs.667377 UniGene:Hs.708861 PDB:1N11
PDB:2YQF PDB:2YVI PDB:3F59 PDB:3KBT PDB:3KBU PDB:3UD1 PDB:3UD2
PDBsum:1N11 PDBsum:2YQF PDBsum:2YVI PDBsum:3F59 PDBsum:3KBT
PDBsum:3KBU PDBsum:3UD1 PDBsum:3UD2 ProteinModelPortal:P16157
SMR:P16157 IntAct:P16157 MINT:MINT-254860 STRING:P16157
PhosphoSite:P16157 DMDM:116241246 PaxDb:P16157 PRIDE:P16157
DNASU:286 Ensembl:ENST00000265709 Ensembl:ENST00000289734
Ensembl:ENST00000314214 Ensembl:ENST00000347528
Ensembl:ENST00000348036 Ensembl:ENST00000352337
Ensembl:ENST00000379758 Ensembl:ENST00000396942
Ensembl:ENST00000396945 Ensembl:ENST00000457297 GeneID:286
KEGG:hsa:286 UCSC:uc003xoi.3 UCSC:uc003xoj.3 UCSC:uc003xok.3
UCSC:uc003xol.3 UCSC:uc003xom.3 CTD:286 GeneCards:GC08M041510
HGNC:HGNC:492 HPA:CAB016057 HPA:HPA004842 MIM:182900 MIM:612641
neXtProt:NX_P16157 Orphanet:251066 Orphanet:822 PharmGKB:PA24798
HOVERGEN:HBG004234 KO:K10380 OMA:CRIITTD OrthoDB:EOG418BMG
PhylomeDB:P16157 EvolutionaryTrace:P16157 GenomeRNAi:286
NextBio:1155 PMAP-CutDB:P16157 ArrayExpress:P16157 Bgee:P16157
CleanEx:HS_ANK1 Genevestigator:P16157 GermOnline:ENSG00000029534
GO:GO:0048821 GO:GO:0045199 GO:GO:0015672 GO:GO:0072661
InterPro:IPR000906 Pfam:PF00791 SMART:SM00218 PROSITE:PS51145
Uniprot:P16157
Length = 1881
Score = 140 (54.3 bits), Expect = 3.6e-05, Sum P(3) = 3.6e-05
Identities = 45/166 (27%), Positives = 77/166 (46%)
Query: 275 FGAVANGSCTDKKVGPPLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKT 334
+G AN PL LA Q G +++ +LL + G + LH L
Sbjct: 624 YGGSANAESVQGVT--PLHLAAQEGHAEMVALLLSKQANGNLGNKS---GLTPLH--LVA 676
Query: 335 SMGLSQHILQNRIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINL 394
G H+ + +L+KHG +V ++G T LH+A+ GN + ++ L++ + D +N
Sbjct: 677 QEG---HV---PVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQAD-VNA 729
Query: 395 KTIMMETPLFFAVKNDHMVCAEVLLRWGANSEVLNLRRERPIDFAK 440
KT + +PL A + H +LL+ GA+ ++ P+ AK
Sbjct: 730 KTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAK 775
Score = 65 (27.9 bits), Expect = 3.6e-05, Sum P(3) = 3.6e-05
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 94 SGMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
+G T LH+A + + R +ELLLK A D ++ G
Sbjct: 370 NGFTPLHIACKKNHVRVMELLLKTGASIDAVTESG 404
Score = 65 (27.9 bits), Expect = 3.6e-05, Sum P(3) = 3.6e-05
Identities = 19/67 (28%), Positives = 37/67 (55%)
Query: 61 LRVSCIFDSVSCATSLVNGDLGPVALVNEVEESSGMTALHLAAESHTARCVELLLKKRAR 120
L ++ +++++ A L+N A VN ++ G+T LH+A+ V LLL + A+
Sbjct: 210 LHIAAHYENLNVAQLLLNRG----ASVNFTPQN-GITPLHIASRRGNVIMVRLLLDRGAQ 264
Query: 121 TDIRSKD 127
+ ++KD
Sbjct: 265 IETKTKD 271
Score = 63 (27.2 bits), Expect = 5.7e-05, Sum P(3) = 5.7e-05
Identities = 14/34 (41%), Positives = 20/34 (58%)
Query: 95 GMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
G T LH+AA+ R ELLL++ A + K+G
Sbjct: 536 GFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNG 569
Score = 62 (26.9 bits), Expect = 7.2e-05, Sum P(3) = 7.2e-05
Identities = 18/68 (26%), Positives = 29/68 (42%)
Query: 61 LRVSCIFDSVSCATSLVNGDLGPVALVNEVEESSGMTALHLAAESHTARCVELLLKKRAR 120
L ++ D A L+ D P +V +G T LH+AA +LLL + A
Sbjct: 177 LHIAARNDDTRTAAVLLQNDPNP-----DVLSKTGFTPLHIAAHYENLNVAQLLLNRGAS 231
Query: 121 TDIRSKDG 128
+ ++G
Sbjct: 232 VNFTPQNG 239
Score = 61 (26.5 bits), Expect = 9.0e-05, Sum P(3) = 9.0e-05
Identities = 14/44 (31%), Positives = 25/44 (56%)
Query: 85 ALVNEVEESSGMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
A VN + G T L++AA+ + V+ LL+ A ++ ++DG
Sbjct: 102 ANVN-AQSQKGFTPLYMAAQENHLEVVKFLLENGANQNVATEDG 144
Score = 59 (25.8 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 19/58 (32%), Positives = 28/58 (48%)
Query: 73 ATSLVNGDLGPVA-LVNEVEESS-GMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
A +L G VA L+N + + ALH+AA + R +LL+ D+ SK G
Sbjct: 149 AVALQQGHENVVAHLINYGTKGKVRLPALHIAARNDDTRTAAVLLQNDPNPDVLSKTG 206
Score = 58 (25.5 bits), Expect = 0.00018, Sum P(3) = 0.00018
Identities = 11/34 (32%), Positives = 20/34 (58%)
Query: 89 EVEESSGMTALHLAAESHTARCVELLLKKRARTD 122
+ + +G++ +H+AA+ CV LLL+ A D
Sbjct: 299 QAKTKNGLSPIHMAAQGDHLDCVRLLLQYDAEID 332
Score = 53 (23.7 bits), Expect = 0.00055, Sum P(3) = 0.00055
Identities = 10/31 (32%), Positives = 19/31 (61%)
Query: 97 TALHLAAESHTARCVELLLKKRARTDIRSKD 127
T LH+AA + + LL+ +A+ + ++KD
Sbjct: 439 TPLHMAARAGHTEVAKYLLQNKAKVNAKAKD 469
Score = 53 (23.7 bits), Expect = 0.00055, Sum P(3) = 0.00055
Identities = 13/40 (32%), Positives = 20/40 (50%)
Query: 89 EVEESSGMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
E + +T LH AA + R E+LL A ++K+G
Sbjct: 266 ETKTKDELTPLHCAARNGHVRISEILLDHGAPIQAKTKNG 305
Score = 52 (23.4 bits), Expect = 0.00069, Sum P(3) = 0.00069
Identities = 17/61 (27%), Positives = 31/61 (50%)
Query: 68 DSVSCATSLVNGDLGPVALVNEVEESSGMTALHLAAESHTARCVELLLKKRARTDIRSKD 127
D + C L+ D A ++++ +T LH+AA R ++LL K A+ + R+ +
Sbjct: 316 DHLDCVRLLLQYD----AEIDDITLDH-LTPLHVAAHCGHHRVAKVLLDKGAKPNSRALN 370
Query: 128 G 128
G
Sbjct: 371 G 371
Score = 51 (23.0 bits), Expect = 0.00086, Sum P(3) = 0.00086
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 94 SGMTALHLAA-ESHTARCVELLLKK 117
+G+ LHLA+ E H VELL K+
Sbjct: 44 NGLNGLHLASKEGHVKMVVELLHKE 68
Score = 51 (23.0 bits), Expect = 0.00086, Sum P(3) = 0.00086
Identities = 17/61 (27%), Positives = 27/61 (44%)
Query: 72 CATSLVNGDLGPVALVNEVEES----SGMTALHLAAESHTARCVELLLKKRARTDIRSKD 127
CA + + ++ + L N + +G T LH+AA V LL+K A +K
Sbjct: 476 CAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKK 535
Query: 128 G 128
G
Sbjct: 536 G 536
Score = 38 (18.4 bits), Expect = 3.6e-05, Sum P(3) = 3.6e-05
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 608 AVQARFVTIMGKEVEIKSAVPKEVLFAEL 636
A F T++ KE+ + K V+FA++
Sbjct: 1220 AEAVNFATLLYKELTAVPYMAKFVIFAKM 1248
>DICTYBASE|DDB_G0276013 [details] [associations]
symbol:DDB_G0276013 "cyclin-like F-box containing
protein" species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR002110 InterPro:IPR001810 PRINTS:PR01415
PROSITE:PS50088 PROSITE:PS50181 SMART:SM00248 SMART:SM00256
dictyBase:DDB_G0276013 eggNOG:COG0666 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
SUPFAM:SSF81383 EMBL:AAFI02000013 ProtClustDB:CLSZ2846613
RefSeq:XP_643383.1 ProteinModelPortal:Q552J9
EnsemblProtists:DDB0237862 GeneID:8620268 KEGG:ddi:DDB_G0276013
Uniprot:Q552J9
Length = 748
Score = 136 (52.9 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 34/117 (29%), Positives = 57/117 (48%)
Query: 347 IVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLKTIMMETPLFFA 406
++ LL++GA + + G TALH+A G G+ +A E LI I K TPL A
Sbjct: 460 VIECLLRNGADIETNTRSGFTALHMACGKGHVEAAESLILANAK-IECKNKNGSTPLHTA 518
Query: 407 VKNDHMVCAEVLLRWGANSEVLNLRRERPIDFAKSQDMRFLLKAANTCHTNLAFLNQ 463
+ H+ E+L+ GAN E N+ P++ A +++ + N+ +N+
Sbjct: 519 AQKGHVRVVELLITHGANIEATNINGVTPLNSAAHNGHTEVVRCLLEHNANMEAINK 575
>UNIPROTKB|F1MRL0 [details] [associations]
symbol:DAPK1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000310 "regulation of N-methyl-D-aspartate selective
glutamate receptor activity" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0015629 "actin
cytoskeleton" evidence=IEA] [GO:0007243 "intracellular protein
kinase cascade" evidence=IEA] [GO:0006917 "induction of apoptosis"
evidence=IEA] [GO:0006915 "apoptotic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005516 "calmodulin binding" evidence=IEA]
[GO:0004672 "protein kinase activity" evidence=IEA]
InterPro:IPR000488 Pfam:PF00531 InterPro:IPR002110
InterPro:IPR000719 InterPro:IPR002290 InterPro:IPR011009
Pfam:PF00069 PRINTS:PR01415 PROSITE:PS50011 PROSITE:PS50017
PROSITE:PS50088 SMART:SM00005 SMART:SM00220 SMART:SM00248
GO:GO:0005524 GO:GO:0005737 GO:GO:0006915 GO:GO:0006917
GO:GO:0015629 SUPFAM:SSF56112 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0007243
GO:GO:0004672 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
GO:GO:2000310 InterPro:IPR020676 InterPro:IPR020675
PANTHER:PTHR22964 PANTHER:PTHR22964:SF1
GeneTree:ENSGT00680000099521 OMA:CLAEHGA EMBL:DAAA02023981
EMBL:DAAA02023982 EMBL:DAAA02023983 EMBL:DAAA02023984
EMBL:DAAA02023985 EMBL:DAAA02023986 IPI:IPI00730736
Ensembl:ENSBTAT00000000982 Uniprot:F1MRL0
Length = 1428
Score = 130 (50.8 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 71/333 (21%), Positives = 122/333 (36%)
Query: 149 PDEYSVEDLVVILGQKNLTTVKLLSQKTKELDEVAYANXXXXXXXXXXXXXXXXXDKVNE 208
P+++ L++ G N+ ++LL ++ +D + +NE
Sbjct: 373 PNKHGTPPLLIAAGCGNIQILQLLIKRGSRID-IQDKGGSNAIYWASRHGHVDTLKFLNE 431
Query: 209 SILVLHDSDLGAKEKTTIYECVIREALALGRATKLQRAVKRNSTPTTSQSAEKRKXXXXX 268
+ L K+K+ E + A G A +Q S P E+
Sbjct: 432 N-----KCPLDVKDKSG--ETALHVAARYGHADVVQLLCSFGSNPNFQDKEEETPLHCAA 484
Query: 269 XXXXXXFG-AVANGSCT----DKKVGPPLILATQAGDEDVIEILLKSKXXXXXXXXXXXX 323
A+ C +++ PL+ A+ G +D++E L +
Sbjct: 485 WHGYYSVAKALCEAGCNVNIKNREGETPLLTASARGYQDIVECLAEH---GADLNASDKD 541
Query: 324 GNSALHCALKTSMGLSQHILQNRIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALED 383
G+ ALH A++ Q ++ L+ G+ V Q++ G T LH+A GN +
Sbjct: 542 GHIALHLAVRRC--------QMEVIQTLISQGSSVDFQDRHGNTPLHVACKDGNVPIVLA 593
Query: 384 LIRKEPDC-INLKTIMMETPLFFAVKNDHMVCAEVLLRWGANSEVLNLRRERPIDFAKSQ 442
L E +C ++L TPL A N + L GAN E L + D AKS+
Sbjct: 594 LC--EANCNLDLSNKYGRTPLHLAANNGILDVVRYLCLTGANVEALTSDGKTAEDLAKSE 651
Query: 443 DMR----FLLKAANTCHTNLAFLNQEKQNASLE 471
L + H L F+ Q + +L+
Sbjct: 652 QHEHVAGLLTRLRKDTHRGL-FIQQLRPTQNLQ 683
Score = 62 (26.9 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 24/86 (27%), Positives = 42/86 (48%)
Query: 43 IDNSLDNADQQTAIVTKLLRVSCIFDSVSCATSLVNGDLGPVALVNEVEESSGMTALHLA 102
+ S D D++ + V K + + D+V L+ G L VN+ + G L +A
Sbjct: 328 VARSDDTLDEEDSFVMKAIIHAINDDNVPGLQHLL-GSLSNYD-VNQPNKH-GTPPLLIA 384
Query: 103 AESHTARCVELLLKKRARTDIRSKDG 128
A + ++LL+K+ +R DI+ K G
Sbjct: 385 AGCGNIQILQLLIKRGSRIDIQDKGG 410
>UNIPROTKB|F1SSQ2 [details] [associations]
symbol:BARD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0085020 "protein K6-linked ubiquitination"
evidence=IEA] [GO:0070531 "BRCA1-A complex" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0046826 "negative regulation of protein export from nucleus"
evidence=IEA] [GO:0043066 "negative regulation of apoptotic
process" evidence=IEA] [GO:0043065 "positive regulation of
apoptotic process" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0042325 "regulation of
phosphorylation" evidence=IEA] [GO:0031436 "BRCA1-BARD1 complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR002110 Pfam:PF00023 PRINTS:PR01415
PROSITE:PS50088 PROSITE:PS50089 SMART:SM00184 SMART:SM00248
InterPro:IPR001357 Pfam:PF00533 Prosite:PS00518 GO:GO:0005737
GO:GO:0043066 GO:GO:0042325 GO:GO:0046872 GO:GO:0008270
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003723 GO:GO:0043065 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 SMART:SM00292 SUPFAM:SSF52113
PROSITE:PS50172 GeneTree:ENSGT00550000074487 InterPro:IPR017907
GO:GO:0070531 GO:GO:0031436 OMA:KKNSIKM GO:GO:0046826 GO:GO:0085020
EMBL:CU856276 Ensembl:ENSSSCT00000017605 Uniprot:F1SSQ2
Length = 780
Score = 136 (52.9 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 38/144 (26%), Positives = 74/144 (51%)
Query: 348 VGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLKTIMMETPLFFAV 407
V LL +G+ + ++ G T LH A G+ + +E L++ + +N ++PL AV
Sbjct: 447 VEYLLGNGSDPNVKDHAGWTPLHEACSHGHLKVVELLLQHKA-LVNTTGYQNDSPLHDAV 505
Query: 408 KNDHMVCAEVLLRWGANSEVLNLRRERPIDFAKSQDMRFLL------KAANTCHTNLAFL 461
KN H+ ++LL +GA+ +N+ RP+D+ S++M+ LL ++++T H +
Sbjct: 506 KNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDSENMKSLLLLPEKDESSSTSHCSAVNT 565
Query: 462 NQEKQNASLESDEDISGTCEALLS 485
Q + + +S + +LS
Sbjct: 566 GQRRDGPLVLIGSGLSSEQQKMLS 589
>UNIPROTKB|J3QKT5 [details] [associations]
symbol:MSI2 "RNA-binding protein Musashi homolog 2"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
HGNC:HGNC:18585 ChiTaRS:MSI2 EMBL:AC005325 EMBL:AC007431
EMBL:AC015883 EMBL:AC091181 ProteinModelPortal:J3QKT5
Ensembl:ENST00000581776 Uniprot:J3QKT5
Length = 99
Score = 110 (43.8 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 27/57 (47%), Positives = 33/57 (57%)
Query: 543 TQEFKSKIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTF 599
+Q K+F+GGL + DSL YF K FG I + V T K+S RGFGFVTF
Sbjct: 16 SQHDPGKMFIGGLSWQTSPDSLRDYFSK-FGEIRECMVMRDPTTKRS--RGFGFVTF 69
>UNIPROTKB|Q83D11 [details] [associations]
symbol:CBU_0935 "RNA binding protein" species:227377
"Coxiella burnetii RSA 493" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 EMBL:AE016828 GenomeReviews:AE016828_GR HSSP:Q9V535
RefSeq:NP_819948.1 ProteinModelPortal:Q83D11 GeneID:1208828
KEGG:cbu:CBU_0935 PATRIC:17930577 HOGENOM:HOG000026939 OMA:QVHSANI
ProtClustDB:CLSK914425 BioCyc:CBUR227377:GJ7S-926-MONOMER
Uniprot:Q83D11
Length = 129
Score = 110 (43.8 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 26/83 (31%), Positives = 46/83 (55%)
Query: 549 KIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAE-FQTEKQSVSRGFGFVTFKHEKSAAA 607
+I+VG LP+ + + L YF + FG IE ++ F+T + S+G+ FVT+ K A
Sbjct: 45 QIYVGNLPYHVVENDLHQYFSR-FGAIESVKIVRNFRTGR---SKGYAFVTYVTPKQAVK 100
Query: 608 AVQARFVTIMGKEVEIKSAVPKE 630
A+ A + G+ + ++ A +E
Sbjct: 101 ALDAHGKDLQGRSLVVRIAKSRE 123
>TIGR_CMR|CBU_0935 [details] [associations]
symbol:CBU_0935 "RNA-binding protein" species:227377
"Coxiella burnetii RSA 493" [GO:0008150 "biological_process"
evidence=ND] [GO:0003723 "RNA binding" evidence=ISS]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
EMBL:AE016828 GenomeReviews:AE016828_GR HSSP:Q9V535
RefSeq:NP_819948.1 ProteinModelPortal:Q83D11 GeneID:1208828
KEGG:cbu:CBU_0935 PATRIC:17930577 HOGENOM:HOG000026939 OMA:QVHSANI
ProtClustDB:CLSK914425 BioCyc:CBUR227377:GJ7S-926-MONOMER
Uniprot:Q83D11
Length = 129
Score = 110 (43.8 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 26/83 (31%), Positives = 46/83 (55%)
Query: 549 KIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAE-FQTEKQSVSRGFGFVTFKHEKSAAA 607
+I+VG LP+ + + L YF + FG IE ++ F+T + S+G+ FVT+ K A
Sbjct: 45 QIYVGNLPYHVVENDLHQYFSR-FGAIESVKIVRNFRTGR---SKGYAFVTYVTPKQAVK 100
Query: 608 AVQARFVTIMGKEVEIKSAVPKE 630
A+ A + G+ + ++ A +E
Sbjct: 101 ALDAHGKDLQGRSLVVRIAKSRE 123
>TAIR|locus:505006600 [details] [associations]
symbol:AT5G12320 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR002110 PRINTS:PR01415
PROSITE:PS50088 SMART:SM00248 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 HSSP:Q00420
EMBL:BT005649 EMBL:AK118824 IPI:IPI00539187 RefSeq:NP_568265.2
UniGene:At.32152 ProteinModelPortal:Q8GWI1 SMR:Q8GWI1 IntAct:Q8GWI1
STRING:Q8GWI1 PRIDE:Q8GWI1 EnsemblPlants:AT5G12320.1 GeneID:831107
KEGG:ath:AT5G12320 TAIR:At5g12320 HOGENOM:HOG000242493
InParanoid:Q8GWI1 OMA:NINEQDS PhylomeDB:Q8GWI1
ProtClustDB:CLSN2690982 Genevestigator:Q8GWI1 Uniprot:Q8GWI1
Length = 144
Score = 110 (43.8 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 32/103 (31%), Positives = 50/103 (48%)
Query: 351 LLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLKTIMMETPLFFAVKND 410
L G + ++ G TALH+AA +G+ +E LI + D IN PL +A N
Sbjct: 30 LASDGLSLHSRDSQGRTALHMAAANGHMTIVEYLISEGVD-INALNDENNAPLHWACLNG 88
Query: 411 HMVCAEVLLRWGANSEVLNLRRERPIDFAKSQDMRFLLKAANT 453
H+ + L+ GA+ +LN P+D A + ++ A NT
Sbjct: 89 HVEVVKRLILAGASLSLLNRYERTPMDEAIGAEKMEIIDAINT 131
>UNIPROTKB|F1M6S2 [details] [associations]
symbol:F1M6S2 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 IPI:IPI00782238
ProteinModelPortal:F1M6S2 Ensembl:ENSRNOT00000030712 Uniprot:F1M6S2
Length = 223
Score = 126 (49.4 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 37/96 (38%), Positives = 52/96 (54%)
Query: 549 KIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQS-VSRGFGFVTFKHEKSAAA 607
KIFVGG+ + +L YFEK +G IE + E ++QS RGF FVTF +
Sbjct: 110 KIFVGGIKEDTEEYNLRDYFEK-YGKIE---IIEVMEDRQSGKKRGFAFVTFDDHDTVDK 165
Query: 608 AVQARFVTIMGKEVEIKSAVPKEVLFAELQKQSAQQ 643
VQ ++ TI G E+K AV K+ E+Q +Q+
Sbjct: 166 IVQ-KYHTINGHNYEVKKAVSKQ----EMQSAGSQR 196
>UNIPROTKB|F1M460 [details] [associations]
symbol:F1M460 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 IPI:IPI00569538
ProteinModelPortal:F1M460 Ensembl:ENSRNOT00000043465
ArrayExpress:F1M460 Uniprot:F1M460
Length = 224
Score = 126 (49.4 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 35/82 (42%), Positives = 46/82 (56%)
Query: 549 KIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKHEKSAAAA 608
K+ +GGL F DSL +FEK +G + D V K+S RGFGFVT+ + AA
Sbjct: 9 KLLIGGLSFETTDDSLREHFEK-WGTLTDCVVMRDPQTKRS--RGFGFVTYSCVEEVDAA 65
Query: 609 VQARFVTIMGKEVEIKSAVPKE 630
V AR + G+ VE K AV +E
Sbjct: 66 VCARPHKVDGRVVEPKRAVSRE 87
Score = 119 (46.9 bits), Expect = 0.00027, P = 0.00027
Identities = 35/96 (36%), Positives = 49/96 (51%)
Query: 549 KIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQS-VSRGFGFVTFKHEKSAAA 607
KIFVGG+ + +L YFEK +G IE V E + QS RGF FVTF +
Sbjct: 100 KIFVGGIKEDTEEYNLRDYFEK-YGKIETIEVME---DSQSGKKRGFAFVTFDDHDTVDK 155
Query: 608 AVQARFVTIMGKEVEIKSAVPKEVLFAELQKQSAQQ 643
V ++ I G E+K A+ K+ E+Q +Q+
Sbjct: 156 IVDQKYHIINGHNCEVKKALSKQ----EMQSAGSQR 187
>UNIPROTKB|F1LM13 [details] [associations]
symbol:Ank3 "Protein Ank3" species:10116 "Rattus
norvegicus" [GO:0007165 "signal transduction" evidence=IEA]
InterPro:IPR000488 Pfam:PF00531 InterPro:IPR002110 Pfam:PF00023
PRINTS:PR01415 PROSITE:PS50017 PROSITE:PS50088 SMART:SM00005
SMART:SM00248 RGD:620157 GO:GO:0007165 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
InterPro:IPR000906 Pfam:PF00791 SMART:SM00218 PROSITE:PS51145
IPI:IPI00389129 Ensembl:ENSRNOT00000040256 ArrayExpress:F1LM13
Uniprot:F1LM13
Length = 1783
Score = 131 (51.2 bits), Expect = 4.1e-05, Sum P(3) = 4.1e-05
Identities = 84/350 (24%), Positives = 135/350 (38%)
Query: 95 GMTALHLAAESHTARCVELLLKKRARTDIRSKDGXXXXXXXXXXXXXXMDVIWNPDEYSV 154
G TALH+A+ + A V++L+ A + +S++G + V + D +
Sbjct: 69 GNTALHIASLAGQAEVVKVLVTNGANVNAQSQNGFTPLYMAAQENHLEV-VRFLLDNGAS 127
Query: 155 EDLVVILGQKNLTTVKLLSQKTKELDEVAYANXXXXXXXXXXXXXXXXXDKVNESILVL- 213
+ L G L L Q ++ + N D + L+L
Sbjct: 128 QSLATEDGFTPLAVA--LQQGHDQVVSLLLENDTKGKVRLPALHIAARKDDTKAAALLLQ 185
Query: 214 HDSDLGAKEKTTIYECVIREALA-LGRATKL-QRAVKRNSTPTTS--QSAEKRKXXXXXX 269
+D++ + K+ I + AT L RA + T S QSAE +
Sbjct: 186 NDTNADIESKSGFTPLHIAAHYGNINVATLLLNRAAAVDFTARVSTWQSAESQGISNMVK 245
Query: 270 XXXXXFGAVANGSCTDKKVGPPLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALH 329
GA + D PL ++G E V+E+LL G S LH
Sbjct: 246 LLLDR-GAKIDAKTRDGLT--PLHCGARSGHEQVVEMLLDR---AAPILSKTKNGLSPLH 299
Query: 330 CALKTSMGLSQHILQNRIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEP 389
A + H+ V +LL+H V LTALH+AA G+ + + L+ K+
Sbjct: 300 MATQ-----GDHL---NCVQLLLQHNVPVDDVTNDYLTALHVAAHCGHYKVAKVLLDKKA 351
Query: 390 DCINLKTIMMETPLFFAVKNDHMVCAEVLLRWGANSEVLNLRRERPIDFA 439
+ N K + TPL A K + + E+LL+ GA+ + + PI A
Sbjct: 352 NP-NAKALNGFTPLHIACKKNRIRVMELLLKHGASIQAVTESGLTPIHVA 400
Score = 61 (26.5 bits), Expect = 4.1e-05, Sum P(3) = 4.1e-05
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 94 SGMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
+G+ ALHLA++ V LL++ A D +K G
Sbjct: 35 NGLNALHLASKEGHVEVVSELLQREANVDAATKKG 69
Score = 50 (22.7 bits), Expect = 4.1e-05, Sum P(3) = 4.1e-05
Identities = 18/64 (28%), Positives = 24/64 (37%)
Query: 433 ERPI-DFAKSQDMRFLLKAANTCHTNLAFLNQEKQNASLESDEDISGTCEALLSMVDDNS 491
E PI D+ R N H + E + SLES LL +DD+S
Sbjct: 1484 EGPIFDYGNISGTRSFADENNVFHDPVDGWQNETPSGSLESPAQARRITGGLLDRLDDSS 1543
Query: 492 NTER 495
+ R
Sbjct: 1544 DQVR 1547
>UNIPROTKB|F1NIB4 [details] [associations]
symbol:HNRNPAB "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00700000104347 EMBL:AADN02028501 EMBL:AADN02028502
EMBL:AADN02028503 IPI:IPI00603451 ProteinModelPortal:F1NIB4
Ensembl:ENSGALT00000023233 ArrayExpress:F1NIB4 Uniprot:F1NIB4
Length = 212
Score = 125 (49.1 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 36/102 (35%), Positives = 51/102 (50%)
Query: 530 RKMNPGMCMIHASTQEFKSKIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQS 589
R ++P M A ++ KIFVGGL + + YF + FG IE + K +
Sbjct: 68 RLIDPKKAM--AMKKDPVKKIFVGGLNPEATEEKIREYFGE-FGEIEAIELP--MDPKTN 122
Query: 590 VSRGFGFVTFKHEKSAAAAVQARFVTIMGKEVEIKSAVPKEV 631
RGF F+TFK E ++ +F + G + EIK A PKEV
Sbjct: 123 KRRGFVFITFKEEDPVKKVLEKKFHNVSGSKCEIKVAQPKEV 164
>ZFIN|ZDB-GENE-050112-1 [details] [associations]
symbol:psmd10 "proteasome (prosome, macropain) 26S
subunit, non-ATPase, 10" species:7955 "Danio rerio" [GO:0000502
"proteasome complex" evidence=IEA] [GO:0055088 "lipid homeostasis"
evidence=IMP] InterPro:IPR002110 Pfam:PF00023 PRINTS:PR01415
PROSITE:PS50088 SMART:SM00248 ZFIN:ZDB-GENE-050112-1
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0055088 GO:GO:0000502
GeneTree:ENSGT00560000077131 KO:K06694 HSSP:P20749 CTD:5716
HOVERGEN:HBG053737 OMA:YDRANIL EMBL:BX088535 EMBL:AY398401
EMBL:DQ388034 IPI:IPI00493544 RefSeq:NP_991317.1 UniGene:Dr.79936
SMR:Q6TGV5 STRING:Q6TGV5 Ensembl:ENSDART00000019003 GeneID:403085
KEGG:dre:403085 InParanoid:Q6TGV5 NextBio:20816876 Uniprot:Q6TGV5
Length = 226
Score = 126 (49.4 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 44/150 (29%), Positives = 73/150 (48%)
Query: 291 PLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKTSMGLSQHILQNRIVGI 350
PL +A AG E+++ L+ SK G + LH A S+++ + I I
Sbjct: 76 PLHIAASAGREEIVRSLI-SKGAQLNSVNQN--GCTPLHYAA------SKNLYE--IAQI 124
Query: 351 LLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLKTIMMETPLFFAVKND 410
LL++GA + +KL T LH A+ GN + ++ L+ KE N++ TPL A +
Sbjct: 125 LLENGADPNATDKLQSTPLHRASAKGNYRLIQ-LLLKESASTNIQDSEGNTPLHLACDEE 183
Query: 411 HMVCAEVLLRWGANSEVLNLRRERPIDFAK 440
A++L+ GA+ + N + P+ AK
Sbjct: 184 RAEAAKLLVEHGASIYIENKEKMTPLQVAK 213
>UNIPROTKB|F1NZ05 [details] [associations]
symbol:F1NZ05 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0046875 "ephrin receptor binding" evidence=IEA]
InterPro:IPR002110 InterPro:IPR001660 PRINTS:PR01415
PROSITE:PS50088 PROSITE:PS50105 SMART:SM00248 SMART:SM00454
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 Gene3D:1.10.150.50 InterPro:IPR013761
InterPro:IPR021129 Pfam:PF00536 SUPFAM:SSF47769 OMA:RNGDQWV
GeneTree:ENSGT00530000063104 EMBL:AADN02005972 EMBL:AADN02005973
EMBL:AADN02005974 EMBL:AADN02005975 EMBL:AADN02005976
EMBL:AADN02005977 EMBL:AADN02005978 EMBL:AADN02005979
EMBL:AADN02005980 EMBL:AADN02005981 IPI:IPI00591687
Ensembl:ENSGALT00000018814 Uniprot:F1NZ05
Length = 880
Score = 121 (47.7 bits), Expect = 4.4e-05, Sum P(3) = 4.4e-05
Identities = 60/238 (25%), Positives = 105/238 (44%)
Query: 279 ANGSCTDKKVGPPLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKTSMGL 338
A+ + D K P+ LA GD D+++I + +ALHCA + G
Sbjct: 38 ASTNVADNKGYFPIHLAAWRGDVDIVKIFIHHGPSHSRVNEQNNENETALHCAAQ--YGH 95
Query: 339 SQHILQNRIVGILLKHGAIVS-QQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLKTI 397
S+ +V +LL+ + + NKL T L +AA G + ++ +I+ P+ +N T
Sbjct: 96 SE------VVAVLLEELTDPTIRNNKLE-TPLDLAALYGRLRVVKMIIKAYPNLMNCNT- 147
Query: 398 MMETPLFFAVKNDHMVCAEVLLRWGAN----SEVLNLRRERPIDFAKSQDMRFLLKAANT 453
TPL A +N H +VLL G + +E + E + F K + R LL+
Sbjct: 148 RKHTPLHLAARNGHKAVVQVLLEAGMDVSCQTEKGSALHEAAL-FGKVEVARILLETG-- 204
Query: 454 CHTNL------AFLNQEKQNASLESDEDISGTCEALLSMVDDNSNTERICSGTKIEVC 505
TN+ L+ K++ S +S + I+ + + + + + ER G + + C
Sbjct: 205 VDTNIKDSLGRTVLDILKEHPSQQSLQ-IAALLQEYMETGNASVSEERPLEGAEHQSC 261
Score = 58 (25.5 bits), Expect = 4.4e-05, Sum P(3) = 4.4e-05
Identities = 28/90 (31%), Positives = 42/90 (46%)
Query: 804 NGSPN---HMVLVPSPPKQKWGALQLSKNGNPSSPVNSASDSNECDRND---SKSPQDLR 857
NG N M+ S K++ AL+ + P V S +DS+ CD D +K P L
Sbjct: 370 NGCRNLGFSMLAQESYSKKRGYALEAIPSV-PLDAVPSENDSSLCDLIDIAVTKKPCSLE 428
Query: 858 SVSISSTI-ERKPTNEVPK-GSSSQRDTST 885
+SS+ + P + GS S R++ST
Sbjct: 429 IARVSSSRPDNAPQVAITAPGSGSHRNSST 458
Score = 53 (23.7 bits), Expect = 4.4e-05, Sum P(3) = 4.4e-05
Identities = 15/37 (40%), Positives = 20/37 (54%)
Query: 92 ESSGMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
+SSG TALH AA + V LL+ A T++ G
Sbjct: 11 DSSGYTALHHAALNGHKDIVFKLLQYEASTNVADNKG 47
>WB|WBGene00006321 [details] [associations]
symbol:sup-12 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000380
"alternative mRNA splicing, via spliceosome" evidence=IMP]
[GO:0040012 "regulation of locomotion" evidence=IGI] [GO:0032956
"regulation of actin cytoskeleton organization" evidence=IGI]
[GO:0016607 "nuclear speck" evidence=IDA] [GO:0036002 "pre-mRNA
binding" evidence=IPI] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0097157 "pre-mRNA
intronic binding" evidence=IPI] [GO:0030529 "ribonucleoprotein
complex" evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 GO:GO:0016607 Gene3D:3.30.70.330
GO:GO:0040012 GO:GO:0030529 GO:GO:0032956 GO:GO:0097157
GO:GO:0000380 HSSP:P09651 HOGENOM:HOG000276232
GeneTree:ENSGT00390000002308 EMBL:FO081409 GeneID:180674
KEGG:cel:CELE_T22B2.4 CTD:180674 PIR:T33034 RefSeq:NP_508674.1
ProteinModelPortal:O45189 SMR:O45189 DIP:DIP-24970N IntAct:O45189
MINT:MINT-1047167 STRING:O45189 EnsemblMetazoa:T22B2.4a
UCSC:T22B2.4 WormBase:T22B2.4a InParanoid:O45189 OMA:DRNTQKS
NextBio:910400 ArrayExpress:O45189 Uniprot:O45189
Length = 248
Score = 127 (49.8 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 34/80 (42%), Positives = 46/80 (57%)
Query: 548 SKIFVGGLPFFLDSDSLGGYFEKHFGPIEDARV-AEFQTEKQSVSRGFGFVTFKHEKSAA 606
+KIFVGGLP+ +L YFE+ FG IE+A V + T+K SRG+GFVT K SA
Sbjct: 35 TKIFVGGLPYHTSDKTLHEYFEQ-FGDIEEAVVITDRNTQK---SRGYGFVTMKDRASAE 90
Query: 607 AAVQARFVTIMGKEVEIKSA 626
A + I G++ + A
Sbjct: 91 RACKDPNPIIDGRKANVNLA 110
>UNIPROTKB|O45189 [details] [associations]
symbol:sup-12 "Protein SUP-12, isoform a" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0000166 GO:GO:0016607
Gene3D:3.30.70.330 GO:GO:0040012 GO:GO:0030529 GO:GO:0032956
GO:GO:0097157 GO:GO:0000380 HSSP:P09651 HOGENOM:HOG000276232
GeneTree:ENSGT00390000002308 EMBL:FO081409 GeneID:180674
KEGG:cel:CELE_T22B2.4 CTD:180674 PIR:T33034 RefSeq:NP_508674.1
ProteinModelPortal:O45189 SMR:O45189 DIP:DIP-24970N IntAct:O45189
MINT:MINT-1047167 STRING:O45189 EnsemblMetazoa:T22B2.4a
UCSC:T22B2.4 WormBase:T22B2.4a InParanoid:O45189 OMA:DRNTQKS
NextBio:910400 ArrayExpress:O45189 Uniprot:O45189
Length = 248
Score = 127 (49.8 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 34/80 (42%), Positives = 46/80 (57%)
Query: 548 SKIFVGGLPFFLDSDSLGGYFEKHFGPIEDARV-AEFQTEKQSVSRGFGFVTFKHEKSAA 606
+KIFVGGLP+ +L YFE+ FG IE+A V + T+K SRG+GFVT K SA
Sbjct: 35 TKIFVGGLPYHTSDKTLHEYFEQ-FGDIEEAVVITDRNTQK---SRGYGFVTMKDRASAE 90
Query: 607 AAVQARFVTIMGKEVEIKSA 626
A + I G++ + A
Sbjct: 91 RACKDPNPIIDGRKANVNLA 110
>UNIPROTKB|F1P1N0 [details] [associations]
symbol:TNKS "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003950 "NAD+ ADP-ribosyltransferase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0000784 "nuclear chromosome, telomeric region"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0018105
"peptidyl-serine phosphorylation" evidence=IEA] [GO:0018107
"peptidyl-threonine phosphorylation" evidence=IEA] [GO:0032212
"positive regulation of telomere maintenance via telomerase"
evidence=IEA] [GO:0043392 "negative regulation of DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0070198 "protein
localization to chromosome, telomeric region" evidence=IEA]
[GO:0070212 "protein poly-ADP-ribosylation" evidence=IEA]
[GO:0070213 "protein auto-ADP-ribosylation" evidence=IEA]
[GO:0090263 "positive regulation of canonical Wnt receptor
signaling pathway" evidence=IEA] InterPro:IPR002110
InterPro:IPR001660 InterPro:IPR011510 InterPro:IPR012317
Pfam:PF00023 Pfam:PF00644 Pfam:PF07647 PRINTS:PR01415
PROSITE:PS50088 PROSITE:PS50105 PROSITE:PS51059 SMART:SM00248
SMART:SM00454 GO:GO:0008270 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0045944
GO:GO:0018105 GO:GO:0070198 GO:GO:0018107 Gene3D:1.10.150.50
InterPro:IPR013761 SUPFAM:SSF47769 GO:GO:0090263 GO:GO:0000209
GeneTree:ENSGT00700000104124 GO:GO:0000784 GO:GO:0003950
GO:GO:0043392 GO:GO:0032212 GO:GO:0070213 GO:GO:0070212 OMA:DDKEYQS
EMBL:AADN02009122 EMBL:AADN02009123 EMBL:AADN02009124
IPI:IPI00575797 Ensembl:ENSGALT00000018652 Uniprot:F1P1N0
Length = 1269
Score = 138 (53.6 bits), Expect = 0.00094, Sum P(2) = 0.00094
Identities = 37/101 (36%), Positives = 56/101 (55%)
Query: 346 RIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLKTIMMETPLFF 405
RIV +LL+HGA V ++K GL LH A G+ + E L+ K C+N + TPL
Sbjct: 325 RIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEVTE-LLLKHGACVNAMDLWQFTPLHE 383
Query: 406 AV-KNDHMVCAEVLLRWGANSEVLNLRRERPIDFAKSQDMR 445
A KN VC+ +LL GA+ ++N + +D A + ++R
Sbjct: 384 AASKNRVEVCS-LLLSHGADPTLVNCHGKSAVDMAPTPELR 423
Score = 130 (50.8 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 38/99 (38%), Positives = 53/99 (53%)
Query: 351 LLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLKTIMMETPLFFAV-KN 409
LL+HGA V+ Q+K GL LH AA G+ + L+ K C+N TPL A K
Sbjct: 798 LLEHGADVNAQDKGGLIPLHNAASYGHVD-IAALLIKYNTCVNATDKWAFTPLHEAAQKG 856
Query: 410 DHMVCAEVLLRWGANSEVLNLRRERPIDFAKSQDMRFLL 448
+CA +LL GA+ + N + P+D A + D+R LL
Sbjct: 857 RTQLCA-LLLAHGADPTMKNQEGQTPLDLATADDIRALL 894
Score = 60 (26.2 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 18/45 (40%), Positives = 25/45 (55%)
Query: 86 LVNEVEESSGMTALHLA-AESHTAR--CVELLLKKRARTDIRSKD 127
++N + S TALH A A H R ELLL+K A + ++KD
Sbjct: 455 IINFKQPQSHETALHCAVAAVHPKRKQVTELLLRKGANVNEKNKD 499
Score = 59 (25.8 bits), Expect = 5.9e-05, Sum P(2) = 5.9e-05
Identities = 17/47 (36%), Positives = 25/47 (53%)
Query: 81 LGPVALVNEVEESSGMTALHLAAESHTARCVELLLKKRARTDIRSKD 127
L P+ + + T LHLAA + R V+LLL+ A D+ +KD
Sbjct: 297 LTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGA--DVHAKD 341
Score = 47 (21.6 bits), Expect = 0.00098, Sum P(2) = 0.00098
Identities = 15/36 (41%), Positives = 20/36 (55%)
Query: 85 ALVNEVEESSGMTALHLAAESHTARCVELLLKKRAR 120
A VNE + MT LH+AAE +E+L K A+
Sbjct: 491 ANVNE-KNKDFMTPLHVAAEKAHNDVMEVLHKHGAK 525
Score = 39 (18.8 bits), Expect = 0.00094, Sum P(2) = 0.00094
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 97 TALHLAA-ESHTARCVELLLKKRARTDIRSKDG 128
T LH AA + C+ +LL+ A +IR+ DG
Sbjct: 226 TPLHEAAIKGKIDVCI-VLLQHGADPNIRNTDG 257
>UNIPROTKB|K7ENX8 [details] [associations]
symbol:CIRBP "Cold-inducible RNA-binding protein"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 Gene3D:3.30.70.330 EMBL:AC004221 EMBL:AC004258
HGNC:HGNC:1982 Ensembl:ENST00000589266 Uniprot:K7ENX8
Length = 89
Score = 109 (43.4 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 31/87 (35%), Positives = 47/87 (54%)
Query: 547 KSKIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKHEKSAA 606
+ K+FVGGL F + SL F K +G I + V + E Q SRGFGFVTF++ A
Sbjct: 5 EGKLFVGGLSFDTNEQSLEQVFSK-YGQISEVVVVK-DRETQR-SRGFGFVTFENIDDAK 61
Query: 607 AAVQA-RFVTIMGKEVEIKSAVPKEVL 632
A+ A ++ G+++ + + VL
Sbjct: 62 DAMMAMNGKSVDGRQIRVDQPLRPSVL 88
>MGI|MGI:1330294 [details] [associations]
symbol:Hnrnpab "heterogeneous nuclear ribonucleoprotein A/B"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001837 "epithelial to mesenchymal transition"
evidence=IDA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=ISO] [GO:0003688 "DNA
replication origin binding" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=ISO] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 MGI:MGI:1330294 GO:GO:0005634
GO:GO:0005737 GO:GO:0045893 GO:GO:0000166 GO:GO:0003677
Gene3D:3.30.70.330 GO:GO:0006351 GO:GO:0003723 GO:GO:0030529
GO:GO:0001837 UniGene:Mm.490267 eggNOG:COG0724 HOGENOM:HOG000234441
HOVERGEN:HBG002295 GeneTree:ENSGT00700000104347 KO:K13044
InterPro:IPR012956 Pfam:PF08143 CTD:3182 OrthoDB:EOG42BX9K
ChiTaRS:HNRNPAB EMBL:D90151 EMBL:L36663 EMBL:AK076132
IPI:IPI00117288 PIR:JQ0448 RefSeq:NP_034578.1 UniGene:Mm.280842
ProteinModelPortal:Q99020 SMR:Q99020 DIP:DIP-31415N IntAct:Q99020
MINT:MINT-4132837 STRING:Q99020 PhosphoSite:Q99020 PaxDb:Q99020
PRIDE:Q99020 Ensembl:ENSMUST00000074669 GeneID:15384 KEGG:mmu:15384
NextBio:288056 Bgee:Q99020 Genevestigator:Q99020
GermOnline:ENSMUSG00000020358 Uniprot:Q99020
Length = 285
Score = 128 (50.1 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 40/113 (35%), Positives = 58/113 (51%)
Query: 524 LGEEQHRK----MNPGMCMIHASTQEFKSKIFVGGLPFFLDSDSLGGYFEKHFGPIEDAR 579
L +++HR ++P M A ++ KIFVGGL + + YF + FG IE
Sbjct: 133 LDQKEHRLDGRVIDPKKAM--AMKKDPVKKIFVGGLNPEATEEKIREYFGQ-FGEIE--- 186
Query: 580 VAEFQTE-KQSVSRGFGFVTFKHEKSAAAAVQARFVTIMGKEVEIKSAVPKEV 631
E + K + RGF F+TFK E ++ +F T+ G + EIK A PKEV
Sbjct: 187 AIELPIDPKLNKRRGFVFITFKEEDPVKKVLEKKFHTVSGSKCEIKVAQPKEV 239
>UNIPROTKB|Q9QX80 [details] [associations]
symbol:Hnrnpab "Hnrpab protein" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
RGD:69255 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0030529 EMBL:CH473948 HOGENOM:HOG000234441 HOVERGEN:HBG002295
HSSP:Q14103 GeneTree:ENSGT00700000104347 KO:K13044
InterPro:IPR012956 Pfam:PF08143 CTD:3182 EMBL:AC105470
EMBL:AF216753 EMBL:BC066664 EMBL:AJ238855 IPI:IPI00212723
PIR:PC4375 PIR:PC4376 PIR:PC4377 RefSeq:NP_112620.2
RefSeq:XP_003750864.1 UniGene:Rn.1427 UniGene:Rn.217734 SMR:Q9QX80
STRING:Q9QX80 Ensembl:ENSRNOT00000033056 GeneID:100910156
GeneID:83498 KEGG:rno:100910156 KEGG:rno:83498 NextBio:615904
Genevestigator:Q9QX80 Uniprot:Q9QX80
Length = 285
Score = 128 (50.1 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 40/113 (35%), Positives = 58/113 (51%)
Query: 524 LGEEQHRK----MNPGMCMIHASTQEFKSKIFVGGLPFFLDSDSLGGYFEKHFGPIEDAR 579
L +++HR ++P M A ++ KIFVGGL + + YF + FG IE
Sbjct: 133 LDQKEHRLDGRVIDPKKAM--AMKKDPVKKIFVGGLNPEATEEKIREYFGQ-FGEIE--- 186
Query: 580 VAEFQTE-KQSVSRGFGFVTFKHEKSAAAAVQARFVTIMGKEVEIKSAVPKEV 631
E + K + RGF F+TFK E ++ +F T+ G + EIK A PKEV
Sbjct: 187 AIELPIDPKLNKRRGFVFITFKEEDPVKKVLEKKFHTVSGSKCEIKVAQPKEV 239
>UNIPROTKB|G5E5V7 [details] [associations]
symbol:G5E5V7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0051170 "nuclear import" evidence=IEA] [GO:0051168 "nuclear
export" evidence=IEA] [GO:0045111 "intermediate filament
cytoskeleton" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005654 "nucleoplasm"
evidence=IEA] [GO:0003697 "single-stranded DNA binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
InterPro:IPR021662 Pfam:PF11627 GeneTree:ENSGT00550000074566
EMBL:DAAA02007960 Ensembl:ENSBTAT00000036150 OMA:ANTMPIL
Uniprot:G5E5V7
Length = 319
Score = 129 (50.5 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 35/94 (37%), Positives = 55/94 (58%)
Query: 539 IHASTQEFKS--KIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGF 596
++ S +E + K+F+GGL F +SL +FE+ +G + D V + T++ SRGFGF
Sbjct: 12 LNQSPKELEQLRKLFIGGLSFETTDESLRSHFEQ-WGMLTDCVVMDPNTKR---SRGFGF 67
Query: 597 VTFKHEKSAAAAVQARFVTIMGKEVEIKSAVPKE 630
VT+ + AA+ AR + G+ VE K AV +E
Sbjct: 68 VTYTTVEEVDAAMNARPQKMDGRVVEPKRAVSRE 101
>RGD|2321074 [details] [associations]
symbol:LOC100360986 "mCG1035404-like" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
RGD:2321074 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
OrthoDB:EOG4HQDKF InterPro:IPR021662 Pfam:PF11627 IPI:IPI00559028
PRIDE:D4ACQ0 Ensembl:ENSRNOT00000002122 UCSC:RGD:2321074
ArrayExpress:D4ACQ0 Uniprot:D4ACQ0
Length = 320
Score = 129 (50.5 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 35/82 (42%), Positives = 47/82 (57%)
Query: 549 KIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKHEKSAAAA 608
K+F+GGL F DSL +FEK +G + D V K+S RGFGFVT+ + AA
Sbjct: 36 KLFIGGLSFETTDDSLREHFEK-WGTLTDCVVMRDPQTKRS--RGFGFVTYSCVEEVDAA 92
Query: 609 VQARFVTIMGKEVEIKSAVPKE 630
+ AR + G+ VE K AV +E
Sbjct: 93 MCARPHKVDGRVVEPKRAVSRE 114
Score = 125 (49.1 bits), Expect = 0.00015, P = 0.00015
Identities = 36/96 (37%), Positives = 51/96 (53%)
Query: 549 KIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQS-VSRGFGFVTFKHEKSAAA 607
KIFVGG+ + +L YFEK +G IE V E ++QS RGF FVTF +
Sbjct: 127 KIFVGGIKEDTEEYNLRDYFEK-YGKIETIEVME---DRQSGKKRGFAFVTFDDHDTVDK 182
Query: 608 AVQARFVTIMGKEVEIKSAVPKEVLFAELQKQSAQQ 643
V ++ TI G E+K A+ K+ E+Q +Q+
Sbjct: 183 IVVQKYHTINGHNCEVKKALSKQ----EMQSAGSQR 214
>UNIPROTKB|F1MAV4 [details] [associations]
symbol:LOC100848694 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0085020 "protein K6-linked ubiquitination"
evidence=IEA] [GO:0070531 "BRCA1-A complex" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0046826 "negative regulation of protein export from nucleus"
evidence=IEA] [GO:0043066 "negative regulation of apoptotic
process" evidence=IEA] [GO:0043065 "positive regulation of
apoptotic process" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0042325 "regulation of
phosphorylation" evidence=IEA] [GO:0031436 "BRCA1-BARD1 complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR002110 Pfam:PF00023 PRINTS:PR01415
PROSITE:PS50088 PROSITE:PS50089 SMART:SM00184 SMART:SM00248
InterPro:IPR001357 Prosite:PS00518 GO:GO:0005737 GO:GO:0043066
GO:GO:0042325 GO:GO:0046872 GO:GO:0008270 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
GO:GO:0003723 GO:GO:0043065 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172
GeneTree:ENSGT00550000074487 InterPro:IPR017907 GO:GO:0070531
GO:GO:0031436 OMA:KKNSIKM GO:GO:0046826 GO:GO:0085020
EMBL:DAAA02005860 IPI:IPI00842170 Ensembl:ENSBTAT00000047858
Uniprot:F1MAV4
Length = 772
Score = 143 (55.4 bits), Expect = 5.4e-05, Sum P(2) = 5.4e-05
Identities = 34/101 (33%), Positives = 60/101 (59%)
Query: 348 VGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLKTIMMETPLFFAV 407
V LL+ G+ + ++ G T LH A G+ + +E L++ + +N ++PL AV
Sbjct: 440 VEYLLQSGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKA-LVNTTGYQNDSPLHDAV 498
Query: 408 KNDHMVCAEVLLRWGANSEVLNLRRERPIDFAKSQDMRFLL 448
KN H+ ++LL +GA+ E +N+ RP+D+A S++M+ LL
Sbjct: 499 KNGHVDIVKLLLTYGASREAVNIFGLRPVDYADSENMKSLL 539
Score = 41 (19.5 bits), Expect = 5.4e-05, Sum P(2) = 5.4e-05
Identities = 9/15 (60%), Positives = 12/15 (80%)
Query: 212 VLHDSDLG-AKEKTT 225
+LHD+DL KEKT+
Sbjct: 109 LLHDTDLSDLKEKTS 123
>UNIPROTKB|E7EWI9 [details] [associations]
symbol:HNRNPA3 "Heterogeneous nuclear ribonucleoprotein A3"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0005730 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC079305 HGNC:HGNC:24941
ChiTaRS:HNRNPA3 IPI:IPI00939124 ProteinModelPortal:E7EWI9
SMR:E7EWI9 Ensembl:ENST00000416446 ArrayExpress:E7EWI9 Bgee:E7EWI9
Uniprot:E7EWI9
Length = 322
Score = 129 (50.5 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 35/82 (42%), Positives = 47/82 (57%)
Query: 549 KIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKHEKSAAAA 608
K+F+GGL F DSL +FEK +G + D V K+S RGFGFVT+ + AA
Sbjct: 14 KLFIGGLSFETTDDSLREHFEK-WGTLTDCVVMRDPQTKRS--RGFGFVTYSCVEEVDAA 70
Query: 609 VQARFVTIMGKEVEIKSAVPKE 630
+ AR + G+ VE K AV +E
Sbjct: 71 MCARPHKVDGRVVEPKRAVSRE 92
Score = 125 (49.1 bits), Expect = 0.00015, P = 0.00015
Identities = 36/96 (37%), Positives = 51/96 (53%)
Query: 549 KIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQS-VSRGFGFVTFKHEKSAAA 607
KIFVGG+ + +L YFEK +G IE V E ++QS RGF FVTF +
Sbjct: 105 KIFVGGIKEDTEEYNLRDYFEK-YGKIETIEVME---DRQSGKKRGFAFVTFDDHDTVDK 160
Query: 608 AVQARFVTIMGKEVEIKSAVPKEVLFAELQKQSAQQ 643
V ++ TI G E+K A+ K+ E+Q +Q+
Sbjct: 161 IVVQKYHTINGHNCEVKKALSKQ----EMQSAGSQR 192
>UNIPROTKB|A5GFN7 [details] [associations]
symbol:RNPC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 eggNOG:COG0724
HOGENOM:HOG000276232 EMBL:CR956362 HOVERGEN:HBG108399
GeneTree:ENSGT00390000002308 UniGene:Ssc.29738
ProteinModelPortal:A5GFN7 STRING:A5GFN7 Ensembl:ENSSSCT00000033672
ArrayExpress:A5GFN7 Uniprot:A5GFN7
Length = 193
Score = 122 (48.0 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 37/95 (38%), Positives = 52/95 (54%)
Query: 534 PGMCMIHASTQEFK-SKIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQS-VS 591
PG +H S ++ +KIFVGGLP+ SL YFE FG IE+A V T++Q+ S
Sbjct: 21 PGA--MHGSQKDTTFTKIFVGGLPYHTTDASLRKYFEG-FGDIEEAVVI---TDRQTGKS 74
Query: 592 RGFGFVTFKHEKSAAAAVQARFVTIMGKEVEIKSA 626
RG+GFVT +A A + I G++ + A
Sbjct: 75 RGYGFVTMADRAAAERACKDPNPNIDGRKANVNLA 109
>UNIPROTKB|A6NHY2 [details] [associations]
symbol:ANKDD1B "Ankyrin repeat and death domain-containing
protein 1B" species:9606 "Homo sapiens" [GO:0007165 "signal
transduction" evidence=IEA] InterPro:IPR000488 Pfam:PF00531
InterPro:IPR002110 PRINTS:PR01415 PROSITE:PS50017 PROSITE:PS50088
SMART:SM00248 GO:GO:0007165 eggNOG:COG0666 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
HOVERGEN:HBG100885 EMBL:AC010245 IPI:IPI00376587 UniGene:Hs.370455
ProteinModelPortal:A6NHY2 SMR:A6NHY2 PhosphoSite:A6NHY2
PRIDE:A6NHY2 GeneCards:GC05P074907 HGNC:HGNC:32525
neXtProt:NX_A6NHY2 InParanoid:A6NHY2 Genevestigator:A6NHY2
Uniprot:A6NHY2
Length = 467
Score = 117 (46.2 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 28/71 (39%), Positives = 45/71 (63%)
Query: 359 SQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLKTIMMETPLFFAVKNDHMVCAEVL 418
S+++K G TALH+AA G+S A++ L+ + D IN ETP F +V+ H C++VL
Sbjct: 135 SEKDKGGNTALHLAAKHGHSPAVQVLLAQWQD-INEMNENGETPFFLSVEGGHEECSKVL 193
Query: 419 LRWGANSEVLN 429
L G+++ + N
Sbjct: 194 LTAGSDTNIPN 204
Score = 62 (26.9 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 91 EESSGMTALHLAAESHTARCVELLLKKRARTDIRSKD 127
+ GM+ALH A +S+ R VE L++ D+ D
Sbjct: 69 KNQDGMSALHFATQSNHVRIVEYLIQDLHLKDLNQPD 105
Score = 61 (26.5 bits), Expect = 7.1e-05, Sum P(2) = 7.1e-05
Identities = 13/30 (43%), Positives = 17/30 (56%)
Query: 97 TALHLAAESHTARCVELLLKKRARTDIRSK 126
TALH A + V+ LLK +AR D+ K
Sbjct: 8 TALHFAVGRNHLSAVDFLLKHKARVDVADK 37
Score = 61 (26.5 bits), Expect = 7.1e-05, Sum P(2) = 7.1e-05
Identities = 14/44 (31%), Positives = 26/44 (59%)
Query: 85 ALVNEVEESSGMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
A V+ ++ G+T +HLAA S + + +L+K A +++DG
Sbjct: 30 ARVDVADKKHGLTVIHLAAWSGSLEVMLMLVKAGADQRAKNQDG 73
>UNIPROTKB|D4ACJ8 [details] [associations]
symbol:Hnrnpa1 "Heterogeneous nuclear ribonucleoprotein A1"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 RGD:69234 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 IPI:IPI00780243 Ensembl:ENSRNOT00000055282
ArrayExpress:D4ACJ8 Uniprot:D4ACJ8
Length = 268
Score = 127 (49.8 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 33/82 (40%), Positives = 47/82 (57%)
Query: 549 KIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKHEKSAAAA 608
K+F+GGL F +SL +FE+ +G + D V K+S RGFGFVT+ + AA
Sbjct: 15 KLFIGGLSFETTDESLRSHFEQ-WGTLTDCVVMRDPNTKRS--RGFGFVTYATVEEVDAA 71
Query: 609 VQARFVTIMGKEVEIKSAVPKE 630
+ AR + G+ VE K AV +E
Sbjct: 72 MNARPHKVDGRVVEPKRAVSRE 93
Score = 117 (46.2 bits), Expect = 0.00076, P = 0.00076
Identities = 32/92 (34%), Positives = 47/92 (51%)
Query: 549 KIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQS-VSRGFGFVTFKHEKSAAA 607
KIFVGG+ + L YFE+ +G IE V E T++ S RGF FVTF S
Sbjct: 106 KIFVGGIKEDTEEHHLRDYFEQ-YGKIE---VIEIMTDRGSGKKRGFAFVTFDDHDSVDK 161
Query: 608 AVQARFVTIMGKEVEIKSAVPKEVLFAELQKQ 639
V ++ T+ G E++ A+ K+ + + Q
Sbjct: 162 IVIQKYHTVNGHNCEVRKALSKQEMASASSSQ 193
>RGD|69255 [details] [associations]
symbol:Hnrnpab "heterogeneous nuclear ribonucleoprotein A/B"
species:10116 "Rattus norvegicus" [GO:0001837 "epithelial to
mesenchymal transition" evidence=ISO] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0003688 "DNA replication origin binding"
evidence=IDA] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0030529 "ribonucleoprotein complex"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0043565
"sequence-specific DNA binding" evidence=ISO] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
RGD:69255 GO:GO:0045892 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003688 HOVERGEN:HBG002295 HSSP:Q14103 InterPro:IPR012956
Pfam:PF08143 PIR:PC4375 PIR:PC4376 PIR:PC4377 UniGene:Rn.1427
UniGene:Rn.217734 EMBL:AF108653 IPI:IPI00208193
ProteinModelPortal:Q9Z0U8 SMR:Q9Z0U8 IntAct:Q9Z0U8 MINT:MINT-7138483
STRING:Q9Z0U8 PRIDE:Q9Z0U8 UCSC:RGD:69255 Genevestigator:Q9Z0U8
Uniprot:Q9Z0U8
Length = 298
Score = 128 (50.1 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 40/113 (35%), Positives = 58/113 (51%)
Query: 524 LGEEQHRK----MNPGMCMIHASTQEFKSKIFVGGLPFFLDSDSLGGYFEKHFGPIEDAR 579
L +++HR ++P M A ++ KIFVGGL + + YF + FG IE
Sbjct: 146 LDQKEHRLDGRVIDPKKAM--AMKKDPVKKIFVGGLNPEATEEKIREYFGQ-FGEIE--- 199
Query: 580 VAEFQTE-KQSVSRGFGFVTFKHEKSAAAAVQARFVTIMGKEVEIKSAVPKEV 631
E + K + RGF F+TFK E ++ +F T+ G + EIK A PKEV
Sbjct: 200 AIELPIDPKLNKRRGFVFITFKEEDPVKKVLEKKFHTVSGSKCEIKVAQPKEV 252
>UNIPROTKB|E1C2G3 [details] [associations]
symbol:MIB1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0001568 "blood vessel development" evidence=IEA] [GO:0001701
"in utero embryonic development" evidence=IEA] [GO:0001756
"somitogenesis" evidence=IEA] [GO:0001841 "neural tube formation"
evidence=IEA] [GO:0001947 "heart looping" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0045665 "negative regulation
of neuron differentiation" evidence=IEA] [GO:0045807 "positive
regulation of endocytosis" evidence=IEA] InterPro:IPR001841
InterPro:IPR002110 InterPro:IPR000433 InterPro:IPR010606
Pfam:PF00023 Pfam:PF00569 Pfam:PF06701 PRINTS:PR01415
PROSITE:PS01357 PROSITE:PS50088 PROSITE:PS50089 PROSITE:PS50135
PROSITE:PS51416 SMART:SM00184 SMART:SM00248 SMART:SM00291
GO:GO:0005886 GO:GO:0005813 GO:GO:0046872 GO:GO:0008270
GO:GO:0031965 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0031410 GO:GO:0007219
GO:GO:0045807 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GeneTree:ENSGT00660000095288 CTD:57534 KO:K10645 OMA:HDAISKE
EMBL:AADN02021337 EMBL:AADN02021338 EMBL:AADN02021339
IPI:IPI00585018 RefSeq:XP_419157.2 UniGene:Gga.8610
Ensembl:ENSGALT00000024152 GeneID:421069 KEGG:gga:421069
NextBio:20823895 Uniprot:E1C2G3
Length = 1006
Score = 107 (42.7 bits), Expect = 6.2e-05, Sum P(3) = 6.2e-05
Identities = 49/209 (23%), Positives = 85/209 (40%)
Query: 228 ECVIREALALGRATKLQRAVKRNSTPTTSQSAEKRKXXXXXXXXXXXFGAVANGSCTDKK 287
E + E L G A L KR TP K FG + S D +
Sbjct: 509 EGAVIEVLHRGSAD-LNARNKRRQTPL---HIAVNKGHLQVVKTLLDFGC--HPSLQDSE 562
Query: 288 VGPPLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKTSMGLSQHILQNRI 347
PL A +D++ +LL++ G +ALH A + +L ++
Sbjct: 563 GDTPLHDAISKKRDDILAVLLEA---GADVTITNNNGFNALHHAALRGNPSAMRVLLSK- 618
Query: 348 VGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLKTIMMETPLFFAV 407
L IV ++ G TALH+AA + + + E L+ + ++++ + +T L AV
Sbjct: 619 ----LPRPWIVDEKKDDGYTALHLAALNNHVEVAELLVHQGNANLDIQNVNQQTALHLAV 674
Query: 408 KNDHMVCAEVLLRWGANSEVLNLRRERPI 436
+ H +L+R GA ++ + + P+
Sbjct: 675 ERQHTQIVRLLVRAGAKLDIQDKDGDTPL 703
Score = 68 (29.0 bits), Expect = 6.2e-05, Sum P(3) = 6.2e-05
Identities = 16/61 (26%), Positives = 27/61 (44%)
Query: 970 CFKQKICFRCKKEEMQWANNPCQHLLWCNVC---KRETIEAAAGSEHLCVICDKKVEDIM 1026
C K+K+ + NN + L C VC KR+T+ G C +C +V+ +
Sbjct: 792 CHKEKVSGQVGSRSPSMINNDSETLEECMVCSDMKRDTLFGPCGHIATCSLCSPRVKKCL 851
Query: 1027 L 1027
+
Sbjct: 852 I 852
Score = 60 (26.2 bits), Expect = 0.00038, Sum P(3) = 0.00038
Identities = 25/107 (23%), Positives = 41/107 (38%)
Query: 929 LENSKGKNPRP--PEDHLVLRWLKGHNNSLFLREYDFSHEY--NSCFKQKICFRCKKEEM 984
+ N KG++P P+ L K H + + S N + C C +
Sbjct: 768 IRNKKGQSPLDLCPDPSLCKALAKCHKEKVSGQVGSRSPSMINNDSETLEECMVCSDMKR 827
Query: 985 QWANNPCQHLLWCNVCK---------RETIEAAAGSEHLCVIC-DKK 1021
PC H+ C++C +E +++ E CV+C DKK
Sbjct: 828 DTLFGPCGHIATCSLCSPRVKKCLICKEQVQSRTKIEE-CVVCSDKK 873
Score = 58 (25.5 bits), Expect = 6.2e-05, Sum P(3) = 6.2e-05
Identities = 25/101 (24%), Positives = 49/101 (48%)
Query: 37 VSKRHFIDNSLDNA--DQQTAIVTKLLRVSCIFD-SVSCATSLVNGDLGPVA-LVN--EV 90
VSK +++ NA ++ + ++ KL D + + NGD+ V L+ +V
Sbjct: 397 VSKVASAGSAISNASGERLSQLLKKLFETQESGDLNEELVKAAANGDVAKVEDLLKRPDV 456
Query: 91 E---ESSGMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
+ + +G TA+ A+++ ++LLLK+ + KDG
Sbjct: 457 DVNGQCAGHTAMQAASQNGHVDILKLLLKQNVDVEAEDKDG 497
Score = 46 (21.3 bits), Expect = 0.00094, Sum P(3) = 0.00094
Identities = 12/38 (31%), Positives = 19/38 (50%)
Query: 89 EVEESSGMTALHLAAESHTARCVELLLKKRARTDIRSK 126
E E+ G A+H AA +E+L + A + R+K
Sbjct: 491 EAEDKDGDRAVHHAAFGDEGAVIEVLHRGSADLNARNK 528
>TAIR|locus:2159401 [details] [associations]
symbol:GR-RBP3 "glycine-rich RNA-binding protein 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0009409 "response to cold"
evidence=IEP] [GO:0005524 "ATP binding" evidence=IDA] [GO:0005507
"copper ion binding" evidence=IDA] [GO:0006626 "protein targeting
to mitochondrion" evidence=RCA] [GO:0009220 "pyrimidine
ribonucleotide biosynthetic process" evidence=RCA] [GO:0009909
"regulation of flower development" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0034968 "histone lysine methylation"
evidence=RCA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0005739 GO:GO:0005524
EMBL:CP002688 GenomeReviews:BA000015_GR Gene3D:3.30.70.330
GO:GO:0003676 GO:GO:0005507 EMBL:AB006696 eggNOG:COG0724
HSSP:Q14103 KO:K12741 EMBL:AY060565 EMBL:AY125548 EMBL:AB493804
IPI:IPI00542729 RefSeq:NP_200911.1 UniGene:At.24064
ProteinModelPortal:Q9FNR1 SMR:Q9FNR1 STRING:Q9FNR1 PaxDb:Q9FNR1
PRIDE:Q9FNR1 EnsemblPlants:AT5G61030.1 GeneID:836224
KEGG:ath:AT5G61030 GeneFarm:3953 TAIR:At5g61030
HOGENOM:HOG000029199 InParanoid:Q9FNR1 OMA:YANDRTS
ProtClustDB:CLSN2916423 Genevestigator:Q9FNR1 Uniprot:Q9FNR1
Length = 309
Score = 128 (50.1 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 29/65 (44%), Positives = 44/65 (67%)
Query: 548 SKIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVA-EFQTEKQSVSRGFGFVTFKHEKSAA 606
SK+F+GG+ + +D DSL F K +G + D RV + +T + SRGFGFVTF ++A+
Sbjct: 40 SKLFIGGMAYSMDEDSLREAFTK-YGEVVDTRVILDRETGR---SRGFGFVTFTSSEAAS 95
Query: 607 AAVQA 611
+A+QA
Sbjct: 96 SAIQA 100
>UNIPROTKB|K7EJV5 [details] [associations]
symbol:CIRBP "Cold-inducible RNA-binding protein"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 Gene3D:3.30.70.330 EMBL:AC004221 EMBL:AC004258
HGNC:HGNC:1982 Ensembl:ENST00000588411 Uniprot:K7EJV5
Length = 105
Score = 108 (43.1 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 30/81 (37%), Positives = 45/81 (55%)
Query: 547 KSKIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKHEKSAA 606
+ K+FVGGL F + SL F K +G I + V + E Q SRGFGFVTF++ A
Sbjct: 5 EGKLFVGGLSFDTNEQSLEQVFSK-YGQISEVVVVK-DRETQR-SRGFGFVTFENIDDAK 61
Query: 607 AAVQA-RFVTIMGKEVEIKSA 626
A+ A ++ G+++ + A
Sbjct: 62 DAMMAMNGKSVDGRQIRVDQA 82
>TAIR|locus:2076096 [details] [associations]
symbol:GRP4 "glycine-rich RNA-binding protein 4"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS;IDA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0003690
"double-stranded DNA binding" evidence=IDA] [GO:0003697
"single-stranded DNA binding" evidence=IDA] [GO:0006970 "response
to osmotic stress" evidence=IMP] [GO:0009409 "response to cold"
evidence=IEP] [GO:0009414 "response to water deprivation"
evidence=IEP] [GO:0009651 "response to salt stress" evidence=IMP]
[GO:0006364 "rRNA processing" evidence=RCA] [GO:0009664 "plant-type
cell wall organization" evidence=RCA] [GO:0042545 "cell wall
modification" evidence=RCA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005739
EMBL:CP002686 GO:GO:0000166 GO:GO:0009651 Gene3D:3.30.70.330
GO:GO:0003723 GO:GO:0003690 GO:GO:0003697 EMBL:AP001297
eggNOG:COG0724 HOGENOM:HOG000276232 HSSP:Q14103
ProtClustDB:PLN03134 EMBL:AY070755 EMBL:AY097374 EMBL:AY085838
IPI:IPI00523873 RefSeq:NP_189025.1 RefSeq:NP_850629.1
UniGene:At.8272 ProteinModelPortal:Q9LIS2 SMR:Q9LIS2 STRING:Q9LIS2
PaxDb:Q8LDS0 PRIDE:Q9LIS2 EnsemblPlants:AT3G23830.1
EnsemblPlants:AT3G23830.2 GeneID:821966 KEGG:ath:AT3G23830
GeneFarm:3951 TAIR:At3g23830 InParanoid:Q9LIS2 OMA:CEDSANN
PhylomeDB:Q9LIS2 Genevestigator:Q9LIS2 Uniprot:Q9LIS2
Length = 136
Score = 108 (43.1 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 32/90 (35%), Positives = 49/90 (54%)
Query: 542 STQEFKSKIFVGGLPFFLDSDSLGGYFEKHFGPIEDARV-AEFQTEKQSVSRGFGFVTFK 600
S + SK+FVGGL + D SL F FG + +A V A+ +T + SRGFGFV+F
Sbjct: 29 SLRYMSSKLFVGGLSWGTDDSSLKQAFTS-FGEVTEATVIADRETGR---SRGFGFVSFS 84
Query: 601 HEKSAAAAVQARF-VTIMGKEVEIKSAVPK 629
E SA A++ + G+++ + A +
Sbjct: 85 CEDSANNAIKEMDGKELNGRQIRVNLATER 114
>UNIPROTKB|G3N3N0 [details] [associations]
symbol:G3N3N0 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007165 "signal transduction" evidence=IEA]
InterPro:IPR000488 Pfam:PF00531 InterPro:IPR002110 Pfam:PF00023
PRINTS:PR01415 PROSITE:PS50017 PROSITE:PS50088 SMART:SM00005
SMART:SM00248 GO:GO:0007165 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 Gene3D:1.10.533.10
InterPro:IPR011029 SUPFAM:SSF47986 InterPro:IPR000906 Pfam:PF00791
SMART:SM00218 PROSITE:PS51145 GeneTree:ENSGT00700000104348
EMBL:DAAA02016469 EMBL:DAAA02016470 EMBL:DAAA02016471
EMBL:DAAA02016472 EMBL:DAAA02016473 EMBL:DAAA02016474
Ensembl:ENSBTAT00000063062 OMA:IERENDD Uniprot:G3N3N0
Length = 1389
Score = 109 (43.4 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 41/140 (29%), Positives = 60/140 (42%)
Query: 285 DKKVGPPLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKTSMGLSQHILQ 344
DKK PL +A + G DV ++LL+ + G + L T + ++ H
Sbjct: 428 DKKGFTPLHVAAKYGSLDVAKLLLQRRAAADSA------GKNGL-----TPLHVAAHYDN 476
Query: 345 NRIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLKTIMMETPLF 404
++ +LL+ GA K G T LHIAA Q L+ + N+ T TPL
Sbjct: 477 QKVALLLLEKGASPHAMAKNGYTPLHIAAKKNQMQIASTLLSYGAET-NIVTKQGVTPLH 535
Query: 405 FAVKNDHMVCAEVLLRWGAN 424
A + H +LL GAN
Sbjct: 536 LASQEGHTDMVTLLLDKGAN 555
Score = 102 (41.0 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 47/168 (27%), Positives = 69/168 (41%)
Query: 275 FGAVANGSCTDKKVGPPLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKT 334
+GA N K+ PL LA+Q G D++ +LL G ++LH A
Sbjct: 519 YGAETN--IVTKQGVTPLHLASQEGHTDMVTLLLDK---GANIHMSTKSGLTSLHLA--- 570
Query: 335 SMGLSQHILQNRIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINL 394
+Q N + IL KHGA KLG T L +A GN + + L+++ + +N
Sbjct: 571 ----AQEDKVN-VADILTKHGADQDAHTKLGYTPLIVACHYGNVKMVNFLLKQGAN-VNA 624
Query: 395 KT--IMMETPLFFAVKNDHMVCAEVLLRWGANSEVLNLRRERPIDFAK 440
KT + P A + H VLL+ GA + AK
Sbjct: 625 KTKKVGHSAPNELAQRG-HTHIINVLLQHGAKPNATTANGNTALAIAK 671
Score = 100 (40.3 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 35/113 (30%), Positives = 50/113 (44%)
Query: 347 IVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRK--EPDCINLKTIMMETPLF 404
+ +LL+ A K GLT LH+AA N + L+ K P + TPL
Sbjct: 446 VAKLLLQRRAAADSAGKNGLTPLHVAAHYDNQKVALLLLEKGASPHAMAKNGY---TPLH 502
Query: 405 FAVKNDHMVCAEVLLRWGANSEVLNLRRERPIDFAKSQ---DMRFLL--KAAN 452
A K + M A LL +GA + ++ + P+ A + DM LL K AN
Sbjct: 503 IAAKKNQMQIASTLLSYGAETNIVTKQGVTPLHLASQEGHTDMVTLLLDKGAN 555
Score = 81 (33.6 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 24/80 (30%), Positives = 43/80 (53%)
Query: 49 NADQQTAIVTKLLRVSCIFDSVSCATSLVNGDLGPVALVNEVEESSGMTALHLAAESHTA 108
NAD Q+ L ++ + +V+ AT L+N A V + +G+T LH+A++
Sbjct: 90 NADVQSKSGFTPLHIAAHYGNVNVATLLLNRG----AAV-DFTARNGITPLHVASKRGNT 144
Query: 109 RCVELLLKKRARTDIRSKDG 128
V+LLL + + D +++DG
Sbjct: 145 NMVKLLLDRGGQIDAKTRDG 164
Score = 70 (29.7 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 22/82 (26%), Positives = 35/82 (42%)
Query: 47 LDNADQQTAIVTKLLRVSCIFDSVSCATSLVNGDLGPVALVNEVEESSGMTALHLAAESH 106
L+N D + + L ++ D A L+ D +V+ SG T LH+AA
Sbjct: 56 LEN-DTKGKVRLPALHIAARKDDTKSAALLLQNDHNA-----DVQSKSGFTPLHIAAHYG 109
Query: 107 TARCVELLLKKRARTDIRSKDG 128
LLL + A D +++G
Sbjct: 110 NVNVATLLLNRGAAVDFTARNG 131
>UNIPROTKB|F1LNG4 [details] [associations]
symbol:Hnrnpa3 "Heterogeneous nuclear ribonucleoprotein A3"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
IPI:IPI00567786 Ensembl:ENSRNOT00000050735 ArrayExpress:F1LNG4
Uniprot:F1LNG4
Length = 357
Score = 129 (50.5 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 35/82 (42%), Positives = 47/82 (57%)
Query: 549 KIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKHEKSAAAA 608
K+F+GGL F DSL +FEK +G + D V K+S RGFGFVT+ + AA
Sbjct: 14 KLFIGGLSFETTDDSLREHFEK-WGTLTDCVVMRDPQTKRS--RGFGFVTYSCVEEVDAA 70
Query: 609 VQARFVTIMGKEVEIKSAVPKE 630
+ AR + G+ VE K AV +E
Sbjct: 71 MCARPHKVDGRVVEPKRAVSRE 92
Score = 125 (49.1 bits), Expect = 0.00018, P = 0.00018
Identities = 36/96 (37%), Positives = 51/96 (53%)
Query: 549 KIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQS-VSRGFGFVTFKHEKSAAA 607
KIFVGG+ + +L YFEK +G IE V E ++QS RGF FVTF +
Sbjct: 105 KIFVGGIKEDTEEYNLRDYFEK-YGKIETIEVME---DRQSGKKRGFAFVTFDDHDTVDK 160
Query: 608 AVQARFVTIMGKEVEIKSAVPKEVLFAELQKQSAQQ 643
V ++ TI G E+K A+ K+ E+Q +Q+
Sbjct: 161 IVVQKYHTINGHNCEVKKALSKQ----EMQSAGSQR 192
>UNIPROTKB|F1PJ90 [details] [associations]
symbol:ANK3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007165 "signal transduction" evidence=IEA]
InterPro:IPR000488 Pfam:PF00531 InterPro:IPR002110 Pfam:PF00023
PRINTS:PR01415 PROSITE:PS50017 PROSITE:PS50088 SMART:SM00005
SMART:SM00248 GO:GO:0007165 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 Gene3D:1.10.533.10
InterPro:IPR011029 SUPFAM:SSF47986 InterPro:IPR000906 Pfam:PF00791
SMART:SM00218 PROSITE:PS51145 GeneTree:ENSGT00700000104348
EMBL:AAEX03002740 Ensembl:ENSCAFT00000020308 Uniprot:F1PJ90
Length = 1782
Score = 132 (51.5 bits), Expect = 0.00020, Sum P(3) = 0.00020
Identities = 83/354 (23%), Positives = 135/354 (38%)
Query: 95 GMTALHLAAESHTARCVELLLKKRARTDIRSKDGXXXXXXXXXXXXXXMDVIWNPDEYSV 154
G TALH+A+ + A V++L+ A + +S++G + V + D +
Sbjct: 107 GNTALHIASLAGQAEVVKVLVTNGANVNAQSQNGFTPLYMAAQENHLEV-VKFLLDNGAS 165
Query: 155 EDLVVILGQKNLTTVKLLSQKTKELDEVAYANXXXXXXXXXXXXXXXXXDKVNESILVL- 213
+ L G L L Q ++ + N D + L+L
Sbjct: 166 QSLATEDGFTPLAVA--LQQGHDQVVSLLLENDTKGKVRLPALHIAARKDDTKAAALLLQ 223
Query: 214 --HDSDLGAKEKTTI------YECVIREALALGRATKLQRAVKRNSTPTTSQSAEKRKXX 265
+++D+ +K T Y + L L RA + + + TP A KR
Sbjct: 224 NDNNADIESKSGFTPLHIAAHYGNINVATLLLNRAAAVDFTARNDITPL--HVASKRGNA 281
Query: 266 XXXXXXXXXFGAVANGSCTDKKVGPPLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGN 325
GA + D PL ++G E V+E+LL G
Sbjct: 282 NMVKLLLDR-GAKIDAKTRDGLT--PLHCGARSGHEQVVEMLLDR---AAPILSKTKNGL 335
Query: 326 SALHCALKTSMGLSQHILQNRIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLI 385
S LH A + H+ V +LL+H V LTALH+AA G+ + + L+
Sbjct: 336 SPLHMATQ-----GDHL---NCVQLLLQHNVPVDDVTNDYLTALHVAAHCGHYKVAKVLL 387
Query: 386 RKEPDCINLKTIMMETPLFFAVKNDHMVCAEVLLRWGANSEVLNLRRERPIDFA 439
K+ + N K + TPL A K + + E+LL+ GA+ + + PI A
Sbjct: 388 DKKANP-NAKALNGFTPLHIACKKNRIKVMELLLKHGASIQAVTESGLTPIHVA 440
Score = 112 (44.5 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 67/247 (27%), Positives = 98/247 (39%)
Query: 276 GAVANGSCTDKKVGPPLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKTS 335
GA N + T PL L+ + G EDV LL G + LH A K
Sbjct: 522 GASPNAATTSGYT--PLHLSAREGHEDVAAFLLDH---GASLSITTKKGFTPLHVAAKYG 576
Query: 336 MGLSQHILQNRIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLK 395
L+ + +LL+ A K GLT LH+AA N Q + L+ + +
Sbjct: 577 K------LE--VANLLLQKSASPDAAGKSGLTPLHVAAHYDN-QKVALLLLDQGASPHAA 627
Query: 396 TIMMETPLFFAVKNDHMVCAEVLLRWGANSEVLNLRRERPIDFAKSQ---DMRFLLKAAN 452
TPL A K + M A LL +GA++ + + + A + DM LL N
Sbjct: 628 AKNGYTPLHIAAKKNQMDIATTLLEYGADANAVTRQGIASVHLAAQEGHVDMVSLLLGRN 687
Query: 453 TCHTNLAFLNQEKQNA-SLESDEDISGTCEALLSMVDDNSNTERICSGTKIEVCKYYESH 511
+ NL+ N+ L + ED E L V+ +N + + TK+ Y H
Sbjct: 688 A-NVNLS--NKSGLTPLHLAAQEDRVNVAEVL---VNQGANVD---AQTKMG---YTPLH 735
Query: 512 SGCIRGS 518
GC G+
Sbjct: 736 VGCHYGN 742
Score = 108 (43.1 bits), Expect = 0.00073, Sum P(3) = 0.00073
Identities = 43/170 (25%), Positives = 67/170 (39%)
Query: 276 GAVANGSCTDKKVGPPLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKTS 335
GA D + PL ++ + G D+++ LL+ G + LH + +
Sbjct: 489 GAQVEAKAKDDQT--PLHISARLGKADIVQQLLQQ---GASPNAATTSGYTPLHLSAREG 543
Query: 336 MGLSQHILQNRIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKE--PDCIN 393
H + LL HGA +S K G T LH+AA G + L++K PD
Sbjct: 544 -----H---EDVAAFLLDHGASLSITTKKGFTPLHVAAKYGKLEVANLLLQKSASPDAAG 595
Query: 394 LKTIMMETPLFFAVKNDHMVCAEVLLRWGANSEVLNLRRERPIDFAKSQD 443
+ TPL A D+ A +LL GA+ P+ A ++
Sbjct: 596 KSGL---TPLHVAAHYDNQKVALLLLDQGASPHAAAKNGYTPLHIAAKKN 642
Score = 80 (33.2 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 22/81 (27%), Positives = 44/81 (54%)
Query: 48 DNADQQTAIVTKLLRVSCIFDSVSCATSLVNGDLGPVALVNEVEESSGMTALHLAAESHT 107
+NAD ++ L ++ + +++ AT L+N A + + +T LH+A++
Sbjct: 226 NNADIESKSGFTPLHIAAHYGNINVATLLLNR-----AAAVDFTARNDITPLHVASKRGN 280
Query: 108 ARCVELLLKKRARTDIRSKDG 128
A V+LLL + A+ D +++DG
Sbjct: 281 ANMVKLLLDRGAKIDAKTRDG 301
Score = 61 (26.5 bits), Expect = 0.00020, Sum P(3) = 0.00020
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 94 SGMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
+G+ ALHLA++ V LL++ A D +K G
Sbjct: 73 NGLNALHLASKEGHVEVVSELLQREANVDAATKKG 107
Score = 42 (19.8 bits), Expect = 0.00020, Sum P(3) = 0.00020
Identities = 21/78 (26%), Positives = 29/78 (37%)
Query: 433 ERPI-DFAKSQDMRFLLKAANTCHTNLAFLNQEKQNASLESDEDISGTCEALLSMVDDNS 491
E PI D+ R N H + E + +LES LL +DD+
Sbjct: 1575 EGPIFDYGNISGTRSFADENNVFHDPVDGWQNETSSGNLESPAQARRITGGLLERLDDSP 1634
Query: 492 NTER--ICSGTKIEVCKY 507
+ R I S K E K+
Sbjct: 1635 DQCRDSITSYLKGEPGKF 1652
>UNIPROTKB|E2RK48 [details] [associations]
symbol:MSI1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 KO:K14411
GeneTree:ENSGT00700000104255 CTD:4440 EMBL:AAEX03014735
RefSeq:XP_854252.2 Ensembl:ENSCAFT00000016345 GeneID:611488
KEGG:cfa:611488 Uniprot:E2RK48
Length = 362
Score = 129 (50.5 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 34/84 (40%), Positives = 45/84 (53%)
Query: 549 KIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKHEKSAAAA 608
KIFVGGL + + YFE+ F ++DA + +T + RGFGFVTF+ E
Sbjct: 110 KIFVGGLSVNTTVEDVKQYFEQ-FEKVDDAMLMFDKTTNRH--RGFGFVTFESEDIVEKV 166
Query: 609 VQARFVTIMGKEVEIKSAVPKEVL 632
+ F I K VE K A PKEV+
Sbjct: 167 CEIHFHEINNKMVECKKAQPKEVM 190
>TAIR|locus:2007903 [details] [associations]
symbol:AT1G17640 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
EMBL:CP002684 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
KO:K12741 OMA:GHQTGYK IPI:IPI00519530 RefSeq:NP_173208.1
UniGene:At.51654 ProteinModelPortal:F4I906 SMR:F4I906 PRIDE:F4I906
EnsemblPlants:AT1G17640.1 GeneID:838341 KEGG:ath:AT1G17640
Uniprot:F4I906
Length = 369
Score = 129 (50.5 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 37/82 (45%), Positives = 45/82 (54%)
Query: 549 KIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKHEKSAAAA 608
KIFVGGLP L+ D L YF + IE + + T + SRGFGFVTF+ E S
Sbjct: 158 KIFVGGLPPLLEEDELKNYFCVYGDIIEHQIMYDHHTGR---SRGFGFVTFQTEDSVDRL 214
Query: 609 VQARFVTIMG-KEVEIKSAVPK 629
V +G K+VEIK A PK
Sbjct: 215 FSDGKVHELGDKQVEIKRAEPK 236
>UNIPROTKB|F1M9N9 [details] [associations]
symbol:Ank2 "Protein Ank2" species:10116 "Rattus
norvegicus" [GO:0007165 "signal transduction" evidence=IEA]
InterPro:IPR000488 Pfam:PF00531 InterPro:IPR002110 Pfam:PF00023
PRINTS:PR01415 PROSITE:PS50017 PROSITE:PS50088 SMART:SM00005
SMART:SM00248 RGD:620156 GO:GO:0007165 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
InterPro:IPR000906 Pfam:PF00791 PROSITE:PS51145
GeneTree:ENSGT00700000104348 IPI:IPI00205634 PRIDE:F1M9N9
Ensembl:ENSRNOT00000055615 ArrayExpress:F1M9N9 Uniprot:F1M9N9
Length = 3898
Score = 128 (50.1 bits), Expect = 7.2e-05, Sum P(4) = 7.2e-05
Identities = 50/166 (30%), Positives = 73/166 (43%)
Query: 275 FGAVANGSCTDKKVGPPLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKT 334
+GA N + T + V PL LA+Q G D++ +LL+ G ++LH A
Sbjct: 624 YGAETN-TVTKQGV-TPLHLASQEGHTDMVTLLLEK---GANIHMSTKSGLTSLHLA--- 675
Query: 335 SMGLSQHILQNRIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINL 394
+Q N + IL KHGA KLG T L +A GN + + L+++ + +N
Sbjct: 676 ----AQEDKVN-VADILTKHGADQDAYTKLGYTPLIVACHYGNVKMVNFLLKQGAN-VNA 729
Query: 395 KTIMMETPLFFAVKNDHMVCAEVLLRWGANSEVLNLRRERPIDFAK 440
KT TPL A + H VLL+ GA + AK
Sbjct: 730 KTKNGYTPLHQAAQQGHTHIINVLLQHGAKPNATTANGNTALAIAK 775
Score = 76 (31.8 bits), Expect = 7.2e-05, Sum P(4) = 7.2e-05
Identities = 25/86 (29%), Positives = 38/86 (44%)
Query: 47 LDNADQQTAIVTKLLRVSCIFDSVSCATSLV----NGDLGPVALVNEVEESSGMTALHLA 102
L+N D + + L ++ D A L+ N D+ +VN ES G T LH+A
Sbjct: 156 LEN-DTKGKVRLPALHIAARKDDTKSAALLLQNDHNADVQSKMMVNRTTES-GFTPLHIA 213
Query: 103 AESHTARCVELLLKKRARTDIRSKDG 128
A LLL + A D +++G
Sbjct: 214 AHYGNVNVATLLLNRGAAVDFTARNG 239
Score = 49 (22.3 bits), Expect = 7.2e-05, Sum P(4) = 7.2e-05
Identities = 46/212 (21%), Positives = 74/212 (34%)
Query: 693 EATAEKSWAGRLLYGQPKTSSNESQAYLVESFEEKSMPKWLRTFKKWLPRFLKDVYRHPL 752
E + E S A ++ S A +S +++ P + KK + R LK+ +
Sbjct: 1631 EKSGETSQASAIVKSSESNKGKTSPAEEKQSAQKQVKPSLV--IKKPVRRKLKEKQKQKE 1688
Query: 753 EGKYALSSLKTDFKAVCGLE-LDH-ASLGYSKLSDFLRTLPDLCHVKAGPIGKNGSPNHM 810
E S KT+ K E +D L L T P ++ PIG
Sbjct: 1689 ESPQG-SEEKTELKKGSSEESVDEDRGLAPEPLPTAKATSP---LIEETPIGSIKDKVKA 1744
Query: 811 VLVPSPPKQKWGA-LQLSKNGNPSSPVNSASDSNECDRNDSKSPQDLRSVSISSTIERKP 869
+ +QK + L + G P + ++ SKS + SS
Sbjct: 1745 LQKRVEDEQKGRSKLPVRVKGKEDVPKKTTPRTHPVVSPSSKSSPSSKMERHSSLTSSAK 1804
Query: 870 TNEVPKGSSSQRDTSTSAISASKKVIDYSTIF 901
T S S ++ S +S S K +S +F
Sbjct: 1805 TERHSPVSPSSKNEKHSPVSPSAKAERHSPVF 1836
Score = 47 (21.6 bits), Expect = 0.00063, Sum P(5) = 0.00063
Identities = 18/73 (24%), Positives = 27/73 (36%)
Query: 809 HMVLVPSPPKQKWGALQLSKNGNPSSPVNSASDSNECDRNDSKSPQDLRSVSISSTIERK 868
H + PS +K + S SPV S S S ++ R +SS +
Sbjct: 1808 HSPVSPSSKNEKHSPVSPSAKAERHSPVFSGKPEKHSP--GSPSTKNERHSPVSSIKTER 1865
Query: 869 PTNEVPKGSSSQR 881
T P G + +R
Sbjct: 1866 HTPVSPSGKTDKR 1878
Score = 45 (20.9 bits), Expect = 7.2e-05, Sum P(4) = 7.2e-05
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 1012 EHLCVICDKKVEDIMLISNPEEFPPL 1037
E LC + +KK ++ S + PP+
Sbjct: 3637 EELCAVKEKKEQEASKESESSDHPPM 3662
Score = 37 (18.1 bits), Expect = 0.00063, Sum P(5) = 0.00063
Identities = 14/47 (29%), Positives = 18/47 (38%)
Query: 598 TFKHEKSAAAAVQARFVTIMGKEVEIKSAVPKEVLFAELQKQSAQQQ 644
T HEK A + T + S K +KQSAQ+Q
Sbjct: 1619 TGTHEKKPQTAPEKSGETSQASAIVKSSESNKGKTSPAEEKQSAQKQ 1665
>FB|FBgn0010258 [details] [associations]
symbol:Rbp4 "RNA-binding protein 4" species:7227 "Drosophila
melanogaster" [GO:0005737 "cytoplasm" evidence=IDA] [GO:0003727
"single-stranded RNA binding" evidence=IDA] [GO:0006397 "mRNA
processing" evidence=ISS] [GO:0003729 "mRNA binding"
evidence=ISS;NAS] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005737 GO:GO:0000166 GO:GO:0003729
GO:GO:0003727 Gene3D:3.30.70.330 HSSP:P09651 EMBL:U18401
ProteinModelPortal:Q24024 SMR:Q24024 IntAct:Q24024 PRIDE:Q24024
FlyBase:FBgn0010258 eggNOG:NOG289504 InParanoid:Q24024
OrthoDB:EOG4CNP6S Bgee:Q24024 Uniprot:Q24024
Length = 428
Score = 130 (50.8 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 37/96 (38%), Positives = 48/96 (50%)
Query: 535 GMCMIHASTQEFKSKIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGF 594
G I E KIF+GGL ++L G+F + FG + DA V S RGF
Sbjct: 19 GKTAIKEEGYEHLRKIFIGGLSTQTTVETLRGFFSQ-FGIVADAVVLRDPVSNHS--RGF 75
Query: 595 GFVTFKHEKSAAAAVQARFVTIMGKEVEIKSAVPKE 630
GFVT+ KS +AR TI K VE K A+P++
Sbjct: 76 GFVTYVDPKSVEIVQRARPHTIDNKIVETKHALPRQ 111
>UNIPROTKB|E9PTS0 [details] [associations]
symbol:Hnrnpab "Protein Hnrnpab" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
RGD:69255 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
InterPro:IPR012956 Pfam:PF08143 EMBL:AC105470 IPI:IPI00951862
Ensembl:ENSRNOT00000065584 ArrayExpress:E9PTS0 Uniprot:E9PTS0
Length = 331
Score = 128 (50.1 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 40/113 (35%), Positives = 58/113 (51%)
Query: 524 LGEEQHRK----MNPGMCMIHASTQEFKSKIFVGGLPFFLDSDSLGGYFEKHFGPIEDAR 579
L +++HR ++P M A ++ KIFVGGL + + YF + FG IE
Sbjct: 132 LDQKEHRLDGRVIDPKKAM--AMKKDPVKKIFVGGLNPEATEEKIREYFGQ-FGEIE--- 185
Query: 580 VAEFQTE-KQSVSRGFGFVTFKHEKSAAAAVQARFVTIMGKEVEIKSAVPKEV 631
E + K + RGF F+TFK E ++ +F T+ G + EIK A PKEV
Sbjct: 186 AIELPIDPKLNKRRGFVFITFKEEDPVKKVLEKKFHTVSGSKCEIKVAQPKEV 238
>UNIPROTKB|F1LM42 [details] [associations]
symbol:Ank2 "Protein Ank2" species:10116 "Rattus
norvegicus" [GO:0007165 "signal transduction" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IPI] [GO:0044325 "ion
channel binding" evidence=IPI] InterPro:IPR000488 Pfam:PF00531
InterPro:IPR002110 Pfam:PF00023 PRINTS:PR01415 PROSITE:PS50017
PROSITE:PS50088 SMART:SM00005 SMART:SM00248 RGD:620156
GO:GO:0005737 GO:GO:0005887 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0016323
GO:GO:0060048 GO:GO:0010628 Gene3D:1.10.533.10 InterPro:IPR011029
SUPFAM:SSF47986 GO:GO:0002027 GO:GO:0034394 InterPro:IPR000906
Pfam:PF00791 SMART:SM00218 PROSITE:PS51145
GeneTree:ENSGT00700000104348 GO:GO:0003283 GO:GO:0070972
GO:GO:0086014 GO:GO:0010881 GO:GO:0086005 GO:GO:0060307
GO:GO:0086070 IPI:IPI00949126 PRIDE:F1LM42
Ensembl:ENSRNOT00000015386 ArrayExpress:F1LM42 Uniprot:F1LM42
Length = 3927
Score = 128 (50.1 bits), Expect = 7.4e-05, Sum P(4) = 7.4e-05
Identities = 50/166 (30%), Positives = 73/166 (43%)
Query: 275 FGAVANGSCTDKKVGPPLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKT 334
+GA N + T + V PL LA+Q G D++ +LL+ G ++LH A
Sbjct: 624 YGAETN-TVTKQGV-TPLHLASQEGHTDMVTLLLEK---GANIHMSTKSGLTSLHLA--- 675
Query: 335 SMGLSQHILQNRIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINL 394
+Q N + IL KHGA KLG T L +A GN + + L+++ + +N
Sbjct: 676 ----AQEDKVN-VADILTKHGADQDAYTKLGYTPLIVACHYGNVKMVNFLLKQGAN-VNA 729
Query: 395 KTIMMETPLFFAVKNDHMVCAEVLLRWGANSEVLNLRRERPIDFAK 440
KT TPL A + H VLL+ GA + AK
Sbjct: 730 KTKNGYTPLHQAAQQGHTHIINVLLQHGAKPNATTANGNTALAIAK 775
Score = 76 (31.8 bits), Expect = 7.4e-05, Sum P(4) = 7.4e-05
Identities = 25/86 (29%), Positives = 38/86 (44%)
Query: 47 LDNADQQTAIVTKLLRVSCIFDSVSCATSLV----NGDLGPVALVNEVEESSGMTALHLA 102
L+N D + + L ++ D A L+ N D+ +VN ES G T LH+A
Sbjct: 156 LEN-DTKGKVRLPALHIAARKDDTKSAALLLQNDHNADVQSKMMVNRTTES-GFTPLHIA 213
Query: 103 AESHTARCVELLLKKRARTDIRSKDG 128
A LLL + A D +++G
Sbjct: 214 AHYGNVNVATLLLNRGAAVDFTARNG 239
Score = 49 (22.3 bits), Expect = 7.4e-05, Sum P(4) = 7.4e-05
Identities = 46/212 (21%), Positives = 74/212 (34%)
Query: 693 EATAEKSWAGRLLYGQPKTSSNESQAYLVESFEEKSMPKWLRTFKKWLPRFLKDVYRHPL 752
E + E S A ++ S A +S +++ P + KK + R LK+ +
Sbjct: 1599 EKSGETSQASAIVKSSESNKGKTSPAEEKQSAQKQVKPSLV--IKKPVRRKLKEKQKQKE 1656
Query: 753 EGKYALSSLKTDFKAVCGLE-LDH-ASLGYSKLSDFLRTLPDLCHVKAGPIGKNGSPNHM 810
E S KT+ K E +D L L T P ++ PIG
Sbjct: 1657 ESPQG-SEEKTELKKGSSEESVDEDRGLAPEPLPTAKATSP---LIEETPIGSIKDKVKA 1712
Query: 811 VLVPSPPKQKWGA-LQLSKNGNPSSPVNSASDSNECDRNDSKSPQDLRSVSISSTIERKP 869
+ +QK + L + G P + ++ SKS + SS
Sbjct: 1713 LQKRVEDEQKGRSKLPVRVKGKEDVPKKTTPRTHPVVSPSSKSSPSSKMERHSSLTSSAK 1772
Query: 870 TNEVPKGSSSQRDTSTSAISASKKVIDYSTIF 901
T S S ++ S +S S K +S +F
Sbjct: 1773 TERHSPVSPSSKNEKHSPVSPSAKAERHSPVF 1804
Score = 47 (21.6 bits), Expect = 0.00065, Sum P(5) = 0.00065
Identities = 18/73 (24%), Positives = 27/73 (36%)
Query: 809 HMVLVPSPPKQKWGALQLSKNGNPSSPVNSASDSNECDRNDSKSPQDLRSVSISSTIERK 868
H + PS +K + S SPV S S S ++ R +SS +
Sbjct: 1776 HSPVSPSSKNEKHSPVSPSAKAERHSPVFSGKPEKHSP--GSPSTKNERHSPVSSIKTER 1833
Query: 869 PTNEVPKGSSSQR 881
T P G + +R
Sbjct: 1834 HTPVSPSGKTDKR 1846
Score = 45 (20.9 bits), Expect = 7.4e-05, Sum P(4) = 7.4e-05
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 1012 EHLCVICDKKVEDIMLISNPEEFPPL 1037
E LC + +KK ++ S + PP+
Sbjct: 3605 EELCAVKEKKEQEASKESESSDHPPM 3630
Score = 43 (20.2 bits), Expect = 0.00080, Sum P(5) = 0.00080
Identities = 19/64 (29%), Positives = 26/64 (40%)
Query: 833 SSPVNSASDSNECDRNDSKSPQDLRSVSISSTIERKPTNEVPKGSSSQRDTSTSAISASK 892
SS S SN + D+ P + S + S I R +V SSS R S A +
Sbjct: 2858 SSSFFSGEPSNF--QTDTCHPTVVHSPEVYSVIIRSSPEDVIMTSSSSRTDSGEASNCEG 2915
Query: 893 KVID 896
+D
Sbjct: 2916 HDLD 2919
Score = 40 (19.1 bits), Expect = 0.00080, Sum P(5) = 0.00080
Identities = 26/91 (28%), Positives = 37/91 (40%)
Query: 749 RHPLEGKYALSSLKTDFKAVCGLELDHAS-LGYSKLSDFLRTLPDLCHVKAGPIGKNGSP 807
R+ LEG + SL++ F + L HAS L S + D +P H + + K
Sbjct: 861 RYSLEGGRS-DSLRS-FSSDRSHTLSHASYLRDSAMIDDTVVIPS--H-QVSALAKEAER 915
Query: 808 NHMVLVPSPPKQKWGALQLSKNGNPSSPVNS 838
N L WG L SSP++S
Sbjct: 916 NSYRL-------SWGTENLDNVALSSSPIHS 939
Score = 37 (18.1 bits), Expect = 0.00065, Sum P(5) = 0.00065
Identities = 14/47 (29%), Positives = 18/47 (38%)
Query: 598 TFKHEKSAAAAVQARFVTIMGKEVEIKSAVPKEVLFAELQKQSAQQQ 644
T HEK A + T + S K +KQSAQ+Q
Sbjct: 1587 TGTHEKKPQTAPEKSGETSQASAIVKSSESNKGKTSPAEEKQSAQKQ 1633
>ZFIN|ZDB-GENE-060621-1 [details] [associations]
symbol:ank3a "ankyrin 3a" species:7955 "Danio rerio"
[GO:0007165 "signal transduction" evidence=IEA] InterPro:IPR000488
Pfam:PF00531 InterPro:IPR002110 Pfam:PF00023 PRINTS:PR01415
PROSITE:PS50017 PROSITE:PS50088 SMART:SM00005 SMART:SM00248
ZFIN:ZDB-GENE-060621-1 GO:GO:0007165 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
InterPro:IPR000906 Pfam:PF00791 SMART:SM00218 PROSITE:PS51145
GeneTree:ENSGT00700000104348 EMBL:BX927186 EMBL:CU861473
IPI:IPI00898818 Ensembl:ENSDART00000088106 Bgee:F1QNB1
Uniprot:F1QNB1
Length = 3980
Score = 135 (52.6 bits), Expect = 7.4e-05, Sum P(4) = 7.4e-05
Identities = 47/166 (28%), Positives = 71/166 (42%)
Query: 275 FGAVANGSCTDKKVGPPLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKT 334
+GA N + T + + P L LA Q G D++ +LL + G + LH A +
Sbjct: 606 YGAECN-TVTRQGISP-LHLAAQEGSVDLVSLLLTKQANVNMGNKN---GLTPLHLAAQD 660
Query: 335 SMGLSQHILQNRIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINL 394
+ +LL HGA + Q K G T LH+A GN + L+ + N
Sbjct: 661 DKA--------GVTEVLLNHGAEIDAQTKSGYTPLHVACHYGNMKMANFLLENQAKP-NA 711
Query: 395 KTIMMETPLFFAVKNDHMVCAEVLLRWGANSEVLNLRRERPIDFAK 440
KT TPL A + H +LL++GA+ L L + A+
Sbjct: 712 KTKNGYTPLHQAAQQGHTHIINMLLQYGASPNELTLNGNTALSIAR 757
Score = 66 (28.3 bits), Expect = 7.4e-05, Sum P(4) = 7.4e-05
Identities = 22/81 (27%), Positives = 34/81 (41%)
Query: 47 LDNADQQTAIVTKLLRVSCIFDSVSCATSLVNGDLGPVALVNEVEESSGMTALHLAAESH 106
L+N D + + L ++ D A L+ D +VE SG T LH+AA
Sbjct: 156 LEN-DTKGKVRLPALHIAARKDDTKSAALLLQNDHNA-----DVESKSGFTPLHIAAHYG 209
Query: 107 TARCVELLLKKRARTDIRSKD 127
LLL + A D +++
Sbjct: 210 NINVATLLLNRGAAVDFMARN 230
Score = 64 (27.6 bits), Expect = 0.00011, Sum P(4) = 0.00011
Identities = 18/58 (31%), Positives = 28/58 (48%)
Query: 73 ATSLVNGDLGPVALV--NEVEESSGMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
A +L G V+L+ N+ + + ALH+AA + LLL+ D+ SK G
Sbjct: 141 AVALQQGHDQVVSLLLENDTKGKVRLPALHIAARKDDTKSAALLLQNDHNADVESKSG 198
Score = 62 (26.9 bits), Expect = 0.00018, Sum P(4) = 0.00018
Identities = 14/34 (41%), Positives = 18/34 (52%)
Query: 95 GMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
G T LH+AA+ LLL+K+A D K G
Sbjct: 518 GFTPLHVAAKYGQLEVANLLLQKKAAPDAAGKSG 551
Score = 61 (26.5 bits), Expect = 0.00022, Sum P(4) = 0.00022
Identities = 12/34 (35%), Positives = 20/34 (58%)
Query: 94 SGMTALHLAAESHTARCVELLLKKRARTDIRSKD 127
+G++ LH+A + CV+LLL+ A D + D
Sbjct: 296 NGLSPLHMATQGDHLNCVQLLLQHNAPVDDVTND 329
Score = 61 (26.5 bits), Expect = 0.00022, Sum P(4) = 0.00022
Identities = 22/81 (27%), Positives = 35/81 (43%)
Query: 49 NADQQTAIVTKLLRVSCIFDSVSCATSLV-NGDLGPVALVNEVEESSGMTALHLAAESHT 107
N D T L ++ + LV NG A VN + +G T L++AA+ +
Sbjct: 62 NVDAATKKGNTALHIASLAGQTEVVRELVTNG-----ANVN-AQSQNGFTPLYMAAQENH 115
Query: 108 ARCVELLLKKRARTDIRSKDG 128
V LL+ + I ++DG
Sbjct: 116 LDVVRFLLENNSSQSIATEDG 136
Score = 59 (25.8 bits), Expect = 0.00034, Sum P(4) = 0.00034
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 89 EVEESSGMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
E + G+T LH A S + VE+LL + A ++K+G
Sbjct: 258 EAKTKDGLTPLHCGARSGHEQVVEMLLDRGAPILSKTKNG 297
Score = 58 (25.5 bits), Expect = 7.4e-05, Sum P(4) = 7.4e-05
Identities = 20/74 (27%), Positives = 35/74 (47%)
Query: 833 SSPVNSASDSNE------CDRNDSKSPQDLRSVSISSTIERKPTN-EVPKGSSSQRDTST 885
SS VNS DSN C+ D + + V+ + I+ P + G +++T+T
Sbjct: 2826 SSVVNS--DSNRQIVNIVCNGVDENQVEYVEKVTPGADIKPLPVYVSIQVGKQYEKETAT 2883
Query: 886 SAISASKKVIDYST 899
+S KKV+ + +
Sbjct: 2884 GQLSTYKKVVSHES 2897
Score = 58 (25.5 bits), Expect = 0.00043, Sum P(4) = 0.00043
Identities = 14/35 (40%), Positives = 19/35 (54%)
Query: 94 SGMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
+G+ ALHLA++ V LLK A D +K G
Sbjct: 36 NGLNALHLASKEGHVEVVAELLKLGANVDAATKKG 70
Score = 57 (25.1 bits), Expect = 0.00053, Sum P(4) = 0.00053
Identities = 12/35 (34%), Positives = 20/35 (57%)
Query: 94 SGMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
+G T LH+A + + + +ELLLK A ++ G
Sbjct: 362 NGFTPLHIACKKNRVKVMELLLKHGASLQAVTESG 396
Score = 48 (22.0 bits), Expect = 0.00066, Sum P(4) = 0.00066
Identities = 27/94 (28%), Positives = 37/94 (39%)
Query: 811 VLVPSPPKQKWGALQLSKNGNPS-SP------VNSASDSNEC----DRNDSKSPQDLRSV 859
V VP K +G+L S + PS SP VNSAS + KS D+ S
Sbjct: 1471 VNVPIQTKSGFGSLSSSSSNTPSASPLRSVWSVNSASPIKSIIGGSPASSIKSASDVASP 1530
Query: 860 SISSTIERKPTNEVPKGSSSQRDTSTSAISASKK 893
S P V +G+ S + +S+ K
Sbjct: 1531 IRSYRTISSPIKTVVQGAQYPVQASPTLLSSPGK 1564
Score = 47 (21.6 bits), Expect = 0.00099, Sum P(5) = 0.00099
Identities = 26/92 (28%), Positives = 39/92 (42%)
Query: 778 LGYSKLSDFLRTLPDLCHVKAGPIG---KNGSPNHM--VLVPSPPKQKWGA-LQLSKNGN 831
LGY + D LR + D ++ A PI K P M L S + LQ+ + N
Sbjct: 759 LGYISVVDTLRGVTDE-NLTATPITEKHKINVPETMNEFLDMSDDEVNINTYLQMLTHRN 817
Query: 832 PSSPVNSASDSNECDRNDSKSPQDLRSVSISS 863
++ V+ D+ + PQDLR + S
Sbjct: 818 TNTDVHKGEDAMTGETEKYLRPQDLRELGDDS 849
Score = 44 (20.5 bits), Expect = 0.00099, Sum P(5) = 0.00099
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 868 KPTNEVPKGSSSQRDTSTSAISASKKV 894
KP N P+ S ++D ST S K++
Sbjct: 2998 KPANHSPESSKRKQD-STGKRSKDKRI 3023
Score = 39 (18.8 bits), Expect = 7.4e-05, Sum P(4) = 7.4e-05
Identities = 8/24 (33%), Positives = 12/24 (50%)
Query: 1018 CDKKVEDIMLISNPEEFPPLSPSD 1041
C VED + P+ P +P+D
Sbjct: 3315 CALSVEDKSQATTPDTTPARTPTD 3338
>UNIPROTKB|Q9QX81 [details] [associations]
symbol:Hnrnpab "RCG34663, isoform CRA_a" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0001837 "epithelial to mesenchymal transition" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0043565
"sequence-specific DNA binding" evidence=ISS] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
RGD:69255 GO:GO:0005634 GO:GO:0005737 GO:GO:0045893 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0030529 GO:GO:0001837
EMBL:CH473948 HOGENOM:HOG000234441 HOVERGEN:HBG002295 HSSP:Q14103
GeneTree:ENSGT00700000104347 KO:K13044 InterPro:IPR012956
Pfam:PF08143 OMA:FILFKDP OrthoDB:EOG42BX9K EMBL:AC105470 PIR:PC4375
PIR:PC4376 PIR:PC4377 UniGene:Rn.1427 UniGene:Rn.217734
GeneID:100910156 KEGG:rno:100910156 EMBL:AJ238854 IPI:IPI00212724
RefSeq:XP_003750865.1 SMR:Q9QX81 STRING:Q9QX81
Ensembl:ENSRNOT00000004885 InParanoid:Q9QX81 Genevestigator:Q9QX81
Uniprot:Q9QX81
Length = 332
Score = 128 (50.1 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 40/113 (35%), Positives = 58/113 (51%)
Query: 524 LGEEQHRK----MNPGMCMIHASTQEFKSKIFVGGLPFFLDSDSLGGYFEKHFGPIEDAR 579
L +++HR ++P M A ++ KIFVGGL + + YF + FG IE
Sbjct: 133 LDQKEHRLDGRVIDPKKAM--AMKKDPVKKIFVGGLNPEATEEKIREYFGQ-FGEIE--- 186
Query: 580 VAEFQTE-KQSVSRGFGFVTFKHEKSAAAAVQARFVTIMGKEVEIKSAVPKEV 631
E + K + RGF F+TFK E ++ +F T+ G + EIK A PKEV
Sbjct: 187 AIELPIDPKLNKRRGFVFITFKEEDPVKKVLEKKFHTVSGSKCEIKVAQPKEV 239
>ZFIN|ZDB-GENE-030131-4865 [details] [associations]
symbol:si:ch211-155m12.3 "si:ch211-155m12.3"
species:7955 "Danio rerio" [GO:0003950 "NAD+ ADP-ribosyltransferase
activity" evidence=IEA] InterPro:IPR002110 InterPro:IPR001660
InterPro:IPR011510 InterPro:IPR012317 Pfam:PF00023 Pfam:PF00644
Pfam:PF07647 PRINTS:PR01415 PROSITE:PS50088 PROSITE:PS50105
PROSITE:PS51059 SMART:SM00248 SMART:SM00454
ZFIN:ZDB-GENE-030131-4865 eggNOG:COG0666 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
Gene3D:1.10.150.50 InterPro:IPR013761 SUPFAM:SSF47769
GeneTree:ENSGT00700000104124 GO:GO:0003950 EMBL:AL928901
HOGENOM:HOG000246964 HOVERGEN:HBG059472 KO:K10799 EMBL:BC162262
EMBL:BC162268 IPI:IPI00497910 RefSeq:NP_001082884.1
UniGene:Dr.80634 SMR:A3KGU1 Ensembl:ENSDART00000091397
GeneID:567533 KEGG:dre:567533 InParanoid:A3KGU1 OMA:CLLEACR
NextBio:20888723 Uniprot:A3KGU1
Length = 1267
Score = 130 (50.8 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 32/107 (29%), Positives = 60/107 (56%)
Query: 325 NSALHCALKTSMGLSQHILQNRIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDL 384
+SALHCA+ S H + ++ +LL+ GA + ++NK +T H+AA G++ LE +
Sbjct: 464 DSALHCAVA-----SPHPKRKQVTELLLRKGANIHEKNKDFMTPFHVAAERGHNDVLE-V 517
Query: 385 IRKEPDCINLKTIMMETPLFFAVKNDHMVCAEVLLRWGANSEVLNLR 431
++K +N + +T L A H+ +LL +GA+ +++L+
Sbjct: 518 LQKHGAKVNAADTLGQTALHRAALAGHIQTCRLLLSYGADPSIVSLQ 564
Score = 127 (49.8 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 39/102 (38%), Positives = 53/102 (51%)
Query: 351 LLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLKTIMMETPLFFAV-KN 409
LL+HGA V+ Q+K GL LH AA G+ + L+ K C+N TPL A K
Sbjct: 797 LLEHGADVNAQDKGGLIPLHNAASYGHVD-IAALLIKFNTCVNATDKWAFTPLHEAAQKG 855
Query: 410 DHMVCAEVLLRWGANSEVLNLRRERPIDFAKSQDMRFLLKAA 451
+CA +LL GAN + N + +D A + D+R LL A
Sbjct: 856 RTQLCA-LLLAHGANPTMKNQEGQTALDLATADDIRALLMDA 896
Score = 58 (25.5 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 17/47 (36%), Positives = 25/47 (53%)
Query: 81 LGPVALVNEVEESSGMTALHLAAESHTARCVELLLKKRARTDIRSKD 127
L P+ + + T LHLAA + R V+LLL+ A D+ +KD
Sbjct: 297 LTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQYGA--DVHAKD 341
>UNIPROTKB|E2RFV7 [details] [associations]
symbol:HNRNPA3 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
KO:K12741 GeneTree:ENSGT00700000104376 CTD:220988 OMA:QGHDPKE
EMBL:AAEX03017802 RefSeq:XP_543761.2 ProteinModelPortal:E2RFV7
Ensembl:ENSCAFT00000021410 GeneID:608074 KEGG:cfa:608074
Uniprot:E2RFV7
Length = 378
Score = 129 (50.5 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 35/82 (42%), Positives = 47/82 (57%)
Query: 549 KIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKHEKSAAAA 608
K+F+GGL F DSL +FEK +G + D V K+S RGFGFVT+ + AA
Sbjct: 36 KLFIGGLSFETTDDSLREHFEK-WGTLTDCVVMRDPQTKRS--RGFGFVTYSCVEEVDAA 92
Query: 609 VQARFVTIMGKEVEIKSAVPKE 630
+ AR + G+ VE K AV +E
Sbjct: 93 MCARPHKVDGRVVEPKRAVSRE 114
Score = 125 (49.1 bits), Expect = 0.00020, P = 0.00020
Identities = 36/96 (37%), Positives = 51/96 (53%)
Query: 549 KIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQS-VSRGFGFVTFKHEKSAAA 607
KIFVGG+ + +L YFEK +G IE V E ++QS RGF FVTF +
Sbjct: 127 KIFVGGIKEDTEEYNLRDYFEK-YGKIETIEVME---DRQSGKKRGFAFVTFDDHDTVDK 182
Query: 608 AVQARFVTIMGKEVEIKSAVPKEVLFAELQKQSAQQ 643
V ++ TI G E+K A+ K+ E+Q +Q+
Sbjct: 183 IVVQKYHTINGHNCEVKKALSKQ----EMQSAGSQR 214
>UNIPROTKB|P51991 [details] [associations]
symbol:HNRNPA3 "Heterogeneous nuclear ribonucleoprotein A3"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0030529
"ribonucleoprotein complex" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] Reactome:REACT_71
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005654 GO:GO:0005730 GO:GO:0000166
Reactome:REACT_1675 Gene3D:3.30.70.330 GO:GO:0003723 EMBL:CH471058
GO:GO:0000398 GO:GO:0071013 eggNOG:COG0724 HOVERGEN:HBG002295
EMBL:AC079305 HOGENOM:HOG000234442 KO:K12741 OrthoDB:EOG4HQDKF
HPA:HPA001666 EMBL:AY363225 EMBL:BC112027 EMBL:BC113470
IPI:IPI00419373 IPI:IPI00455134 PIR:I52962 RefSeq:NP_919223.1
UniGene:Hs.516539 ProteinModelPortal:P51991 SMR:P51991
IntAct:P51991 MINT:MINT-4999802 STRING:P51991 PhosphoSite:P51991
DMDM:51338779 PaxDb:P51991 PRIDE:P51991 Ensembl:ENST00000392524
Ensembl:ENST00000411529 Ensembl:ENST00000435711 GeneID:220988
KEGG:hsa:220988 UCSC:uc002ulb.1 CTD:220988 GeneCards:GC02P178077
HGNC:HGNC:24941 MIM:605372 neXtProt:NX_P51991 PharmGKB:PA162391169
InParanoid:P51991 OMA:QGHDPKE PhylomeDB:P51991 ChiTaRS:HNRNPA3
GenomeRNAi:220988 NextBio:91133 PMAP-CutDB:P51991
ArrayExpress:P51991 Bgee:P51991 CleanEx:HS_HNRNPA3
Genevestigator:P51991 GermOnline:ENSG00000170144 Uniprot:P51991
Length = 378
Score = 129 (50.5 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 35/82 (42%), Positives = 47/82 (57%)
Query: 549 KIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKHEKSAAAA 608
K+F+GGL F DSL +FEK +G + D V K+S RGFGFVT+ + AA
Sbjct: 36 KLFIGGLSFETTDDSLREHFEK-WGTLTDCVVMRDPQTKRS--RGFGFVTYSCVEEVDAA 92
Query: 609 VQARFVTIMGKEVEIKSAVPKE 630
+ AR + G+ VE K AV +E
Sbjct: 93 MCARPHKVDGRVVEPKRAVSRE 114
Score = 125 (49.1 bits), Expect = 0.00020, P = 0.00020
Identities = 36/96 (37%), Positives = 51/96 (53%)
Query: 549 KIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQS-VSRGFGFVTFKHEKSAAA 607
KIFVGG+ + +L YFEK +G IE V E ++QS RGF FVTF +
Sbjct: 127 KIFVGGIKEDTEEYNLRDYFEK-YGKIETIEVME---DRQSGKKRGFAFVTFDDHDTVDK 182
Query: 608 AVQARFVTIMGKEVEIKSAVPKEVLFAELQKQSAQQ 643
V ++ TI G E+K A+ K+ E+Q +Q+
Sbjct: 183 IVVQKYHTINGHNCEVKKALSKQ----EMQSAGSQR 214
>UNIPROTKB|F2Z5B4 [details] [associations]
symbol:HNRNPA3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0005730 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0071013 KO:K12741
GeneTree:ENSGT00700000104376 OMA:QGHDPKE EMBL:CU862048
RefSeq:XP_003133549.1 ProteinModelPortal:F2Z5B4 SMR:F2Z5B4
Ensembl:ENSSSCT00000017409 GeneID:100516520 KEGG:ssc:100516520
Uniprot:F2Z5B4
Length = 379
Score = 129 (50.5 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 35/82 (42%), Positives = 47/82 (57%)
Query: 549 KIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKHEKSAAAA 608
K+F+GGL F DSL +FEK +G + D V K+S RGFGFVT+ + AA
Sbjct: 36 KLFIGGLSFETTDDSLREHFEK-WGTLTDCVVMRDPQTKRS--RGFGFVTYSCVEEVDAA 92
Query: 609 VQARFVTIMGKEVEIKSAVPKE 630
+ AR + G+ VE K AV +E
Sbjct: 93 MCARPHKVDGRVVEPKRAVSRE 114
Score = 125 (49.1 bits), Expect = 0.00020, P = 0.00020
Identities = 36/96 (37%), Positives = 51/96 (53%)
Query: 549 KIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQS-VSRGFGFVTFKHEKSAAA 607
KIFVGG+ + +L YFEK +G IE V E ++QS RGF FVTF +
Sbjct: 127 KIFVGGIKEDTEEYNLRDYFEK-YGKIETIEVME---DRQSGKKRGFAFVTFDDHDTVDK 182
Query: 608 AVQARFVTIMGKEVEIKSAVPKEVLFAELQKQSAQQ 643
V ++ TI G E+K A+ K+ E+Q +Q+
Sbjct: 183 IVVQKYHTINGHNCEVKKALSKQ----EMQSAGSQR 214
>RGD|727807 [details] [associations]
symbol:Hnrnpa3 "heterogeneous nuclear ribonucleoprotein A3"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003729 "mRNA binding" evidence=IMP] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0005681 "spliceosomal complex"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0035770
"ribonucleoprotein granule" evidence=IDA] [GO:0043005 "neuron
projection" evidence=IDA] [GO:0051028 "mRNA transport"
evidence=IMP] [GO:0051033 "RNA transmembrane transporter activity"
evidence=IMP] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 RGD:727807 GO:GO:0005634
GO:GO:0005737 GO:GO:0008380 GO:GO:0000166 GO:GO:0003729
GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0043005 GO:GO:0005681
GO:GO:0051028 eggNOG:COG0724 HOVERGEN:HBG002295
HOGENOM:HOG000234442 KO:K12741 OrthoDB:EOG4HQDKF CTD:220988
EMBL:AY363226 EMBL:AY363227 EMBL:BC081878 IPI:IPI00382376
IPI:IPI00464458 RefSeq:NP_001104764.1 RefSeq:NP_001104765.1
RefSeq:NP_937765.1 UniGene:Rn.107690 UniGene:Rn.99947
ProteinModelPortal:Q6URK4 SMR:Q6URK4 STRING:Q6URK4
PhosphoSite:Q6URK4 PRIDE:Q6URK4 GeneID:362152 KEGG:rno:362152
UCSC:RGD:727807 InParanoid:Q6URK4 NextBio:678824
ArrayExpress:Q6URK4 Genevestigator:Q6URK4 GO:GO:0035770
GO:GO:0051033 Uniprot:Q6URK4
Length = 379
Score = 129 (50.5 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 35/82 (42%), Positives = 47/82 (57%)
Query: 549 KIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKHEKSAAAA 608
K+F+GGL F DSL +FEK +G + D V K+S RGFGFVT+ + AA
Sbjct: 36 KLFIGGLSFETTDDSLREHFEK-WGTLTDCVVMRDPQTKRS--RGFGFVTYSCVEEVDAA 92
Query: 609 VQARFVTIMGKEVEIKSAVPKE 630
+ AR + G+ VE K AV +E
Sbjct: 93 MCARPHKVDGRVVEPKRAVSRE 114
Score = 125 (49.1 bits), Expect = 0.00020, P = 0.00020
Identities = 36/96 (37%), Positives = 51/96 (53%)
Query: 549 KIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQS-VSRGFGFVTFKHEKSAAA 607
KIFVGG+ + +L YFEK +G IE V E ++QS RGF FVTF +
Sbjct: 127 KIFVGGIKEDTEEYNLRDYFEK-YGKIETIEVME---DRQSGKKRGFAFVTFDDHDTVDK 182
Query: 608 AVQARFVTIMGKEVEIKSAVPKEVLFAELQKQSAQQ 643
V ++ TI G E+K A+ K+ E+Q +Q+
Sbjct: 183 IVVQKYHTINGHNCEVKKALSKQ----EMQSAGSQR 214
>UNIPROTKB|E1BEG2 [details] [associations]
symbol:HNRNPA3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00700000104376 OMA:QGHDPKE EMBL:DAAA02004160
IPI:IPI00690667 Ensembl:ENSBTAT00000028757 Uniprot:E1BEG2
Length = 380
Score = 129 (50.5 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 35/82 (42%), Positives = 47/82 (57%)
Query: 549 KIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKHEKSAAAA 608
K+F+GGL F DSL +FEK +G + D V K+S RGFGFVT+ + AA
Sbjct: 36 KLFIGGLSFETTDDSLREHFEK-WGTLTDCVVMRDPQTKRS--RGFGFVTYSCVEEVDAA 92
Query: 609 VQARFVTIMGKEVEIKSAVPKE 630
+ AR + G+ VE K AV +E
Sbjct: 93 MCARPHKVDGRVVEPKRAVSRE 114
Score = 125 (49.1 bits), Expect = 0.00021, P = 0.00021
Identities = 36/96 (37%), Positives = 51/96 (53%)
Query: 549 KIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQS-VSRGFGFVTFKHEKSAAA 607
KIFVGG+ + +L YFEK +G IE V E ++QS RGF FVTF +
Sbjct: 127 KIFVGGIKEDTEEYNLRDYFEK-YGKIETIEVME---DRQSGKKRGFAFVTFDDHDTVDK 182
Query: 608 AVQARFVTIMGKEVEIKSAVPKEVLFAELQKQSAQQ 643
V ++ TI G E+K A+ K+ E+Q +Q+
Sbjct: 183 IVVQKYHTINGHNCEVKKALSKQ----EMQSAGSQR 214
>ZFIN|ZDB-GENE-030131-7450 [details] [associations]
symbol:tnks "tankyrase, TRF1-interacting
ankyrin-related ADP-ribose polymerase" species:7955 "Danio rerio"
[GO:0003950 "NAD+ ADP-ribosyltransferase activity" evidence=IEA]
InterPro:IPR002110 InterPro:IPR001660 InterPro:IPR011510
InterPro:IPR012317 Pfam:PF00023 Pfam:PF00644 Pfam:PF07647
PRINTS:PR01415 PROSITE:PS50088 PROSITE:PS50105 PROSITE:PS51059
SMART:SM00248 SMART:SM00454 ZFIN:ZDB-GENE-030131-7450
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GeneTree:ENSGT00700000104124 GO:GO:0003950
EMBL:BX248308 EMBL:BX511222 EMBL:BX511228 IPI:IPI00492609
Ensembl:ENSDART00000111694 Bgee:E7FFW3 Uniprot:E7FFW3
Length = 1280
Score = 140 (54.3 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 45/155 (29%), Positives = 76/155 (49%)
Query: 292 LILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKTSMGLSQHILQNRIVGIL 351
L+ A ++G+E+ + LL + + L T + L+ + RIV +L
Sbjct: 285 LLEAARSGNEEKLMALLTPLNVNCHASDGRKSTSQKM---LSTPLHLAAGYNRVRIVQLL 341
Query: 352 LKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLKTIMMETPLFFAV-KND 410
L+HGA V ++K GL LH A G+ + E L+ K C+N + TPL A KN
Sbjct: 342 LQHGADVHAKDKGGLVPLHNACSYGHYEVTE-LLLKHGACVNAMDLWQFTPLHEAASKNR 400
Query: 411 HMVCAEVLLRWGANSEVLNLRRERPIDFAKSQDMR 445
VC+ +LL GA+ ++N + +D A + +++
Sbjct: 401 VEVCS-LLLSHGADPTLVNCHGKSAVDMAPTPELK 434
Score = 130 (50.8 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
Identities = 38/99 (38%), Positives = 53/99 (53%)
Query: 351 LLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLKTIMMETPLFFAV-KN 409
LL+HGA V+ Q+K GL LH AA G+ + L+ K C+N TPL A K
Sbjct: 809 LLEHGADVNAQDKGGLIPLHNAASYGHVD-IAALLIKYNTCVNATDKWAFTPLHEAAQKG 867
Query: 410 DHMVCAEVLLRWGANSEVLNLRRERPIDFAKSQDMRFLL 448
+CA +LL GA+ + N + P+D A + D+R LL
Sbjct: 868 RTQLCA-LLLAHGADPTMKNQEGQTPLDLATADDIRALL 905
Score = 125 (49.1 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 32/106 (30%), Positives = 61/106 (57%)
Query: 326 SALHCALKTSMGLSQHILQNRIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLI 385
+ALHCA+ +S H + ++ +LL+ GA V+++NK +T LH+AA ++ LE ++
Sbjct: 477 TALHCAV-----VSPHPKRKQVTELLLRKGANVNEKNKDFMTPLHVAAERAHNDILE-VL 530
Query: 386 RKEPDCINLKTIMMETPLFFAVKNDHMVCAEVLLRWGANSEVLNLR 431
+K +N + +T L A H+ +LL +GA+ +++L+
Sbjct: 531 QKHGAKMNAVDTLGQTALHRAALAGHLQTCRLLLSYGADPAIVSLQ 576
Score = 58 (25.5 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
Identities = 15/31 (48%), Positives = 20/31 (64%)
Query: 97 TALHLAAESHTARCVELLLKKRARTDIRSKD 127
T LHLAA + R V+LLL+ A D+ +KD
Sbjct: 324 TPLHLAAGYNRVRIVQLLLQHGA--DVHAKD 352
Score = 56 (24.8 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 17/45 (37%), Positives = 24/45 (53%)
Query: 86 LVNEVEESSGMTALHLAAES-HTAR--CVELLLKKRARTDIRSKD 127
++N + TALH A S H R ELLL+K A + ++KD
Sbjct: 466 IINFKHPQTHETALHCAVVSPHPKRKQVTELLLRKGANVNEKNKD 510
Score = 48 (22.0 bits), Expect = 0.00079, Sum P(2) = 0.00079
Identities = 19/45 (42%), Positives = 22/45 (48%)
Query: 85 ALVNEVEESSGMTALHLAA-ESHTARCVELLLKKRARTDIRSKDG 128
A +N V+ + G TALH AA H C LLL A I S G
Sbjct: 535 AKMNAVD-TLGQTALHRAALAGHLQTC-RLLLSYGADPAIVSLQG 577
Score = 47 (21.6 bits), Expect = 0.0010, Sum P(2) = 0.0010
Identities = 15/36 (41%), Positives = 20/36 (55%)
Query: 85 ALVNEVEESSGMTALHLAAESHTARCVELLLKKRAR 120
A VNE + MT LH+AAE +E+L K A+
Sbjct: 502 ANVNE-KNKDFMTPLHVAAERAHNDILEVLQKHGAK 536
Score = 42 (19.8 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 20/58 (34%), Positives = 26/58 (44%)
Query: 78 NGDLGPVA-LVNEV----EESSGM--TALHLAAESHTARCVELLLKKRARTDIRSKDG 128
NGD+ V LV+ V ++ +G T LH AA VE LL+ A R G
Sbjct: 138 NGDVSRVKRLVDSVNVNAKDMAGRKSTPLHFAAGFGRKDVVEHLLQTGANVHARDDGG 195
>UNIPROTKB|F8VXY0 [details] [associations]
symbol:HNRNPA1 "Heterogeneous nuclear ribonucleoprotein A1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0045111
"intermediate filament cytoskeleton" evidence=IDA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005737 GO:GO:0005730 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0045111 InterPro:IPR021662
Pfam:PF11627 EMBL:AC078778 HGNC:HGNC:5031 ChiTaRS:HNRNPA1
IPI:IPI01022801 ProteinModelPortal:F8VXY0 SMR:F8VXY0 PRIDE:F8VXY0
Ensembl:ENST00000547617 ArrayExpress:F8VXY0 Bgee:F8VXY0
Uniprot:F8VXY0
Length = 304
Score = 127 (49.8 bits), Expect = 7.9e-05, P = 7.9e-05
Identities = 33/82 (40%), Positives = 47/82 (57%)
Query: 549 KIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKHEKSAAAA 608
K+F+GGL F +SL +FE+ +G + D V K+S RGFGFVT+ + AA
Sbjct: 15 KLFIGGLSFETTDESLRSHFEQ-WGTLTDCVVMRDPNTKRS--RGFGFVTYATVEEVDAA 71
Query: 609 VQARFVTIMGKEVEIKSAVPKE 630
+ AR + G+ VE K AV +E
Sbjct: 72 MNARPHKVDGRVVEPKRAVSRE 93
>RGD|1560391 [details] [associations]
symbol:Gabpb1 "GA binding protein transcription factor, beta
subunit 1" species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0046982 "protein heterodimerization activity" evidence=ISO]
InterPro:IPR002110 Pfam:PF13606 PRINTS:PR01415 PROSITE:PS50088
SMART:SM00248 RGD:1560391 eggNOG:COG0666 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
CTD:2553 HOGENOM:HOG000231772 HOVERGEN:HBG051686 KO:K09454
OrthoDB:EOG4MCX0P OMA:VKRQCIE GeneTree:ENSGT00660000095543
EMBL:BC098859 IPI:IPI00203561 RefSeq:NP_001034125.1
UniGene:Rn.61149 SMR:Q4KM28 STRING:Q4KM28
Ensembl:ENSRNOT00000045443 GeneID:499883 KEGG:rno:499883
UCSC:RGD:1560391 InParanoid:Q4KM28 NextBio:704304
Genevestigator:Q4KM28 Uniprot:Q4KM28
Length = 304
Score = 127 (49.8 bits), Expect = 7.9e-05, P = 7.9e-05
Identities = 44/175 (25%), Positives = 83/175 (47%)
Query: 288 VGPPLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKTSMGLSQHILQNRI 347
+G L+ A +AG +D + IL+ + G S LH A + H +
Sbjct: 6 LGKKLLEAARAGQDDEVRILMAN----GAPFTTDWLGTSPLHLAAQYG-----HYSTTEV 56
Query: 348 VGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLKTIMMETPLFFAV 407
LL+ G + K+ T LH+AA G++ +E L++ D +N K ++ T L +A
Sbjct: 57 ---LLRAGVSRDARTKVDRTPLHMAASEGHASIVEVLLKHGAD-VNAKDMLKMTALHWAT 112
Query: 408 KNDHMVCAEVLLRWGANSEVLNLRRERPIDFA---KSQDMRFLLKAA--NTCHTN 457
+++H E+L+++GA+ + + D + ++D+ +L+ A N +TN
Sbjct: 113 EHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEILQIAMQNQINTN 167
>UNIPROTKB|D4A6A2 [details] [associations]
symbol:D4A6A2 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 IPI:IPI00949070
ProteinModelPortal:D4A6A2 Ensembl:ENSRNOT00000035567 Uniprot:D4A6A2
Length = 232
Score = 124 (48.7 bits), Expect = 7.9e-05, P = 7.9e-05
Identities = 35/82 (42%), Positives = 48/82 (58%)
Query: 549 KIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKHEKSAAAA 608
K+F+GGL F DSL +F+K +G + D V K+S RGFGFVT+ E+ AA
Sbjct: 14 KLFIGGLSFETTDDSLREHFQK-WGTLTDCVVMRDPQTKRS--RGFGFVTYSCEE-VDAA 69
Query: 609 VQARFVTIMGKEVEIKSAVPKE 630
+ AR + G+ VE K AV +E
Sbjct: 70 MCARPHKVDGRVVEPKRAVSRE 91
Score = 122 (48.0 bits), Expect = 0.00014, P = 0.00014
Identities = 36/96 (37%), Positives = 50/96 (52%)
Query: 549 KIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQS-VSRGFGFVTFKHEKSAAA 607
KIFVGG+ +L YFEK +G IE V E ++QS RGF FVTF +
Sbjct: 104 KIFVGGIKEDTGEYNLRDYFEK-YGKIETIEVME---DRQSGKKRGFAFVTFDDHDTVDK 159
Query: 608 AVQARFVTIMGKEVEIKSAVPKEVLFAELQKQSAQQ 643
V ++ TI G E+K A+ K+ E+Q +Q+
Sbjct: 160 IVVQKYHTINGHNCEVKKALSKQ----EMQSAGSQR 191
>UNIPROTKB|F1LN68 [details] [associations]
symbol:Dapk1 "Protein Dapk1" species:10116 "Rattus
norvegicus" [GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] [GO:0005516 "calmodulin binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006915 "apoptotic process" evidence=IEA]
[GO:0006917 "induction of apoptosis" evidence=IEA] [GO:0007243
"intracellular protein kinase cascade" evidence=IEA] [GO:0015629
"actin cytoskeleton" evidence=IEA] [GO:0043066 "negative regulation
of apoptotic process" evidence=IEA] [GO:2000310 "regulation of
N-methyl-D-aspartate selective glutamate receptor activity"
evidence=IEA] InterPro:IPR000488 Pfam:PF00531 InterPro:IPR002110
InterPro:IPR000719 InterPro:IPR002290 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00069 PRINTS:PR01415
PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011 PROSITE:PS50017
PROSITE:PS50088 SMART:SM00005 SMART:SM00220 SMART:SM00248
RGD:1311629 GO:GO:0005524 GO:GO:0005737 GO:GO:0006915 GO:GO:0006917
GO:GO:0015629 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
GO:GO:0007243 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
GO:GO:2000310 InterPro:IPR020676 InterPro:IPR020675
PANTHER:PTHR22964 PANTHER:PTHR22964:SF1 OMA:CLAEHGA IPI:IPI00193026
Ensembl:ENSRNOT00000024675 ArrayExpress:F1LN68 Uniprot:F1LN68
Length = 1442
Score = 136 (52.9 bits), Expect = 7.9e-05, Sum P(3) = 7.9e-05
Identities = 72/333 (21%), Positives = 123/333 (36%)
Query: 149 PDEYSVEDLVVILGQKNLTTVKLLSQKTKELDEVAYANXXXXXXXXXXXXXXXXXDKVNE 208
P+++ L++ G N+ ++LL ++ +D V +NE
Sbjct: 375 PNKHGTPPLLIAAGCGNIQMLQLLIKRGSRID-VQDKGGSNAIYWASRHGHVDTLKFLNE 433
Query: 209 SILVLHDSDLGAKEKTTIYECVIREALALGRATKLQRAVKRNSTPTTSQSAEKRKXXXXX 268
+ L K+K+ E + A G A +Q S P E+
Sbjct: 434 N-----KCPLDVKDKSG--ETALHVAARYGHADVVQLLCSFGSNPDFQDKEEETPLHCAA 486
Query: 269 XXXXXXFG-AVANGSCT----DKKVGPPLILATQAGDEDVIEILLKSKXXXXXXXXXXXX 323
A+ C +++ PL+ A+ G D++E L +
Sbjct: 487 WHGYYSVARALCEVGCNVNIKNREGETPLLTASARGYHDIVECLAEH---GADLNASDKD 543
Query: 324 GNSALHCALKTSMGLSQHILQNRIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALED 383
G+ ALH A++ Q ++ LL HG +V Q++ G T LH+A G++ +
Sbjct: 544 GHIALHLAVRRC--------QMEVIKTLLGHGCLVDFQDRHGNTPLHVACKDGSAPIVVA 595
Query: 384 LIRKEPDC-INLKTIMMETPLFFAVKNDHMVCAEVLLRWGANSEVLNLRRERPIDFAKSQ 442
L E C +++ TPL A N + L GAN E L L + D AK++
Sbjct: 596 LC--EASCNLDISNKYGRTPLHLAANNGILDVVRYLCLMGANVEALTLDGKTAEDLAKAE 653
Query: 443 DMR----FLLKAANTCHTNLAFLNQEKQNASLE 471
L + H L F+ Q + +L+
Sbjct: 654 QHEHVAGLLARLRKDTHRGL-FIQQLRPTQNLQ 685
Score = 62 (26.9 bits), Expect = 7.9e-05, Sum P(3) = 7.9e-05
Identities = 23/86 (26%), Positives = 42/86 (48%)
Query: 43 IDNSLDNADQQTAIVTKLLRVSCIFDSVSCATSLVNGDLGPVALVNEVEESSGMTALHLA 102
+ S D D++ + V K + + D+V L+ G L VN+ + G L +A
Sbjct: 330 VARSDDTLDEEDSFVMKAIIHAINDDNVPGLQHLL-GSLSSYD-VNQPNKH-GTPPLLIA 386
Query: 103 AESHTARCVELLLKKRARTDIRSKDG 128
A + ++LL+K+ +R D++ K G
Sbjct: 387 AGCGNIQMLQLLIKRGSRIDVQDKGG 412
Score = 38 (18.4 bits), Expect = 7.9e-05, Sum P(3) = 7.9e-05
Identities = 14/48 (29%), Positives = 24/48 (50%)
Query: 446 FLLKAANTCHTNLAFLNQEKQNASLESDEDISGTCEALLSMVDDNSNT 493
FLLKA++ NL QE +S S + + +++S D ++ T
Sbjct: 1391 FLLKASSVFKINLDGNGQEAYASSCNSGTSYN-SISSVVSRRDSHAWT 1437
>MGI|MGI:88026 [details] [associations]
symbol:Ank3 "ankyrin 3, epithelial" species:10090 "Mus
musculus" [GO:0000281 "cytokinesis after mitosis" evidence=ISO]
[GO:0005200 "structural constituent of cytoskeleton" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005764 "lysosome" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=ISO] [GO:0007009 "plasma membrane organization"
evidence=ISO] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0007409 "axonogenesis" evidence=IMP] [GO:0007411 "axon
guidance" evidence=IMP] [GO:0010650 "positive regulation of cell
communication by electrical coupling" evidence=ISO] [GO:0014704
"intercalated disc" evidence=ISO;IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0016323 "basolateral plasma membrane"
evidence=ISO] [GO:0016328 "lateral plasma membrane" evidence=ISO]
[GO:0016529 "sarcoplasmic reticulum" evidence=ISO] [GO:0019228
"regulation of action potential in neuron" evidence=IMP]
[GO:0030018 "Z disc" evidence=ISO] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030424 "axon" evidence=IDA] [GO:0030425
"dendrite" evidence=ISO] [GO:0031594 "neuromuscular junction"
evidence=ISO] [GO:0033268 "node of Ranvier" evidence=ISO;IDA]
[GO:0033270 "paranode region of axon" evidence=IDA] [GO:0034112
"positive regulation of homotypic cell-cell adhesion" evidence=ISO]
[GO:0042383 "sarcolemma" evidence=ISO] [GO:0043001 "Golgi to plasma
membrane protein transport" evidence=ISO] [GO:0043005 "neuron
projection" evidence=ISO] [GO:0043194 "axon initial segment"
evidence=ISO;IDA] [GO:0045184 "establishment of protein
localization" evidence=ISO] [GO:0045202 "synapse" evidence=IDA]
[GO:0045211 "postsynaptic membrane" evidence=ISO] [GO:0045760
"positive regulation of action potential" evidence=TAS] [GO:0050808
"synapse organization" evidence=IMP] [GO:0071709 "membrane
assembly" evidence=ISO] [GO:0072659 "protein localization to plasma
membrane" evidence=ISO;IDA;IMP] [GO:0072660 "maintenance of protein
location in plasma membrane" evidence=ISO] [GO:0072661 "protein
targeting to plasma membrane" evidence=ISO;IMP] [GO:0090314
"positive regulation of protein targeting to membrane"
evidence=ISO] InterPro:IPR000488 Pfam:PF00531 InterPro:IPR002110
Pfam:PF00023 PRINTS:PR01415 PROSITE:PS50017 PROSITE:PS50088
SMART:SM00005 SMART:SM00248 EMBL:L40632 MGI:MGI:88026 GO:GO:0007411
GO:GO:0007165 GO:GO:0014704 GO:GO:0016020 GO:GO:0005856
GO:GO:0005200 GO:GO:0045211 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0050808
GO:GO:0045202 EMBL:CH466553 GO:GO:0005764 GO:GO:0042383
GO:GO:0005923 GO:GO:0019228 GO:GO:0000281 GO:GO:0045760
Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986 GO:GO:0016328
KO:K10380 GO:GO:0072661 InterPro:IPR000906 Pfam:PF00791
SMART:SM00218 PROSITE:PS51145 GeneTree:ENSGT00700000104348 CTD:288
ChiTaRS:ANK3 GO:GO:0043194 GO:GO:0033268 GO:GO:0043001
GO:GO:0072660 GO:GO:0071709 EMBL:L40631 EMBL:AK035681 EMBL:AK162007
EMBL:AC100427 EMBL:AC129018 EMBL:AC132435 EMBL:AC156836
EMBL:BC021657 EMBL:U89274 EMBL:U89275 RefSeq:NP_033800.2
RefSeq:NP_666117.2 RefSeq:NP_733788.2 RefSeq:NP_733789.1
RefSeq:NP_733790.2 RefSeq:NP_733791.2 RefSeq:NP_733924.2
RefSeq:NP_733925.2 RefSeq:NP_733926.2 UniGene:Mm.235960
ProteinModelPortal:G5E8K5 SMR:G5E8K5 IntAct:G5E8K5
Ensembl:ENSMUST00000054167 Ensembl:ENSMUST00000092433
Ensembl:ENSMUST00000092434 GeneID:11735 KEGG:mmu:11735 OMA:YDILALE
NextBio:279435 Bgee:G5E8K5 GO:GO:0009925 GO:GO:0033270
Uniprot:G5E8K5
Length = 1961
Score = 129 (50.5 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 82/354 (23%), Positives = 133/354 (37%)
Query: 95 GMTALHLAAESHTARCVELLLKKRARTDIRSKDGXXXXXXXXXXXXXXMDVIWNPDEYSV 154
G TALH+A+ + A V++L+ A + +S++G + V + D +
Sbjct: 90 GNTALHIASLAGQAEVVKVLVTNGANVNAQSQNGFTPLYMAAQENHLEV-VRFLLDNGAS 148
Query: 155 EDLVVILGQKNLTTVKLLSQKTKELDEVAYANXXXXXXXXXXXXXXXXXDKVNESILVL- 213
+ L G L L Q ++ + N D + L+L
Sbjct: 149 QSLATEDGFTPLAVA--LQQGHDQVVSLLLENDTKGKVRLPALHIAARKDDTKAAALLLQ 206
Query: 214 HDSDLGAKEKTTI--------YECVIREALALGRATKLQRAVKRNSTPTTSQSAEKRKXX 265
+D++ + K+ Y + L L RA + + + TP A KR
Sbjct: 207 NDTNADVESKSGFTPLHIAAHYGNINVATLLLNRAAAVDFTARNDITPL--HVASKRGNA 264
Query: 266 XXXXXXXXXFGAVANGSCTDKKVGPPLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGN 325
GA + D PL ++G E V+E+LL G
Sbjct: 265 NMVKLLLDR-GAKIDAKTRDGLT--PLHCGARSGHEQVVEMLLDRSAPILSKTKN---GL 318
Query: 326 SALHCALKTSMGLSQHILQNRIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLI 385
S LH A + H+ V +LL+H V LTALH+AA G+ + + L+
Sbjct: 319 SPLHMATQ-----GDHL---NCVQLLLQHNVPVDDVTNDYLTALHVAAHCGHYKVAKVLL 370
Query: 386 RKEPDCINLKTIMMETPLFFAVKNDHMVCAEVLLRWGANSEVLNLRRERPIDFA 439
K+ N K + TPL A K + + E+LL+ GA+ + + PI A
Sbjct: 371 DKKASP-NAKALNGFTPLHIACKKNRIRVMELLLKHGASIQAVTESGLTPIHVA 423
Score = 111 (44.1 bits), Expect = 7.9e-05, Sum P(3) = 7.9e-05
Identities = 44/170 (25%), Positives = 67/170 (39%)
Query: 276 GAVANGSCTDKKVGPPLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKTS 335
GA D + PL ++ + G D+++ LL+ G + LH A +
Sbjct: 472 GAQVEAKAKDDQT--PLHISARLGKADIVQQLLQQ---GASPNAATTSGYTPLHLAAREG 526
Query: 336 MGLSQHILQNRIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKE--PDCIN 393
H + LL HGA +S K G T LH+AA G + L++K PD
Sbjct: 527 -----H---EDVAAFLLDHGASLSITTKKGFTPLHVAAKYGKLEVASLLLQKSASPDAAG 578
Query: 394 LKTIMMETPLFFAVKNDHMVCAEVLLRWGANSEVLNLRRERPIDFAKSQD 443
+ TPL A D+ A +LL GA+ P+ A ++
Sbjct: 579 KSGL---TPLHVAAHYDNQKVALLLLDQGASPHAAAKNGYTPLHIAAKKN 625
Score = 110 (43.8 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 73/278 (26%), Positives = 110/278 (39%)
Query: 276 GAVANGSCTDKKVGPPLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKTS 335
GA N + T PL LA + G EDV LL G + LH A K
Sbjct: 505 GASPNAATTSGYT--PLHLAAREGHEDVAAFLLDH---GASLSITTKKGFTPLHVAAKYG 559
Query: 336 MGLSQHILQNRIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLK 395
L+ + +LL+ A K GLT LH+AA N Q + L+ + +
Sbjct: 560 K------LE--VASLLLQKSASPDAAGKSGLTPLHVAAHYDN-QKVALLLLDQGASPHAA 610
Query: 396 TIMMETPLFFAVKNDHMVCAEVLLRWGANSEVLNLRRERPIDFAKSQ---DMRFLLKAAN 452
TPL A K + M A LL +GA++ + + + A + DM LL + N
Sbjct: 611 AKNGYTPLHIAAKKNQMDIATSLLEYGADANAVTRQGIASVHLAAQEGHVDMVSLLLSRN 670
Query: 453 TCHTNLAFLNQEKQNA-SLESDEDISGTCEALLSMVDDNSNTERICSGTKIEVCKYYESH 511
+ NL+ N+ L + ED E L V+ ++ + + TK+ Y H
Sbjct: 671 A-NVNLS--NKSGLTPLHLAAQEDRVNVAEVL---VNQGAHVD---AQTKMG---YTPLH 718
Query: 512 SGCIRGS-KCFYALGEEQHR---KMNPGMCMIHASTQE 545
GC G+ K L + + K G +H + Q+
Sbjct: 719 VGCHYGNIKIVNFLLQHSAKVNAKTKNGYTALHQAAQQ 756
Score = 81 (33.6 bits), Expect = 7.9e-05, Sum P(3) = 7.9e-05
Identities = 29/119 (24%), Positives = 56/119 (47%)
Query: 22 IINSLLEDDKKQLINVSKRHFIDNSLD------------NADQQTAIVTKLLRVSCIFDS 69
+++ LLE+D K + + H D NAD ++ L ++ + +
Sbjct: 171 VVSLLLENDTKGKVRLPALHIAARKDDTKAAALLLQNDTNADVESKSGFTPLHIAAHYGN 230
Query: 70 VSCATSLVNGDLGPVALVNEVEESSGMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
++ AT L+N A + + +T LH+A++ A V+LLL + A+ D +++DG
Sbjct: 231 INVATLLLNR-----AAAVDFTARNDITPLHVASKRGNANMVKLLLDRGAKIDAKTRDG 284
Score = 61 (26.5 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 94 SGMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
+G+ ALHLA++ V LL++ A D +K G
Sbjct: 56 NGLNALHLASKEGHVEVVSELLQREANVDAATKKG 90
Score = 49 (22.3 bits), Expect = 7.9e-05, Sum P(3) = 7.9e-05
Identities = 16/56 (28%), Positives = 25/56 (44%)
Query: 440 KSQDMRFLLKAANTCHTNLAFLNQEKQNASLESDEDISGTCEALLSMVDDNSNTER 495
+ Q M ++ A ++LA E + SLES LL +DD+S+ R
Sbjct: 1763 QGQAMLNRVQRAELAMSSLAGWQNETPSGSLESPAQARRLTGGLLDRLDDSSDQAR 1818
>UNIPROTKB|F8VSB5 [details] [associations]
symbol:HNRNPA1 "Heterogeneous nuclear ribonucleoprotein A1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0045111
"intermediate filament cytoskeleton" evidence=IDA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005737 GO:GO:0005730 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0045111 InterPro:IPR021662
Pfam:PF11627 EMBL:AC078778 HGNC:HGNC:5031 ChiTaRS:HNRNPA1
IPI:IPI01022218 ProteinModelPortal:F8VSB5 SMR:F8VSB5 PRIDE:F8VSB5
Ensembl:ENST00000552494 ArrayExpress:F8VSB5 Bgee:F8VSB5
Uniprot:F8VSB5
Length = 306
Score = 127 (49.8 bits), Expect = 8.0e-05, P = 8.0e-05
Identities = 33/82 (40%), Positives = 47/82 (57%)
Query: 549 KIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKHEKSAAAA 608
K+F+GGL F +SL +FE+ +G + D V K+S RGFGFVT+ + AA
Sbjct: 15 KLFIGGLSFETTDESLRSHFEQ-WGTLTDCVVMRDPNTKRS--RGFGFVTYATVEEVDAA 71
Query: 609 VQARFVTIMGKEVEIKSAVPKE 630
+ AR + G+ VE K AV +E
Sbjct: 72 MNARPHKVDGRVVEPKRAVSRE 93
>UNIPROTKB|F8VRQ1 [details] [associations]
symbol:HNRNPA1 "Heterogeneous nuclear ribonucleoprotein A1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0045111
"intermediate filament cytoskeleton" evidence=IDA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005737 GO:GO:0005730 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0045111 InterPro:IPR021662
Pfam:PF11627 EMBL:AC078778 HGNC:HGNC:5031 ChiTaRS:HNRNPA1
IPI:IPI01021093 ProteinModelPortal:F8VRQ1 SMR:F8VRQ1 PRIDE:F8VRQ1
Ensembl:ENST00000551133 ArrayExpress:F8VRQ1 Bgee:F8VRQ1
Uniprot:F8VRQ1
Length = 307
Score = 127 (49.8 bits), Expect = 8.0e-05, P = 8.0e-05
Identities = 33/82 (40%), Positives = 47/82 (57%)
Query: 549 KIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKHEKSAAAA 608
K+F+GGL F +SL +FE+ +G + D V K+S RGFGFVT+ + AA
Sbjct: 15 KLFIGGLSFETTDESLRSHFEQ-WGTLTDCVVMRDPNTKRS--RGFGFVTYATVEEVDAA 71
Query: 609 VQARFVTIMGKEVEIKSAVPKE 630
+ AR + G+ VE K AV +E
Sbjct: 72 MNARPHKVDGRVVEPKRAVSRE 93
>WB|WBGene00001999 [details] [associations]
symbol:hrp-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0040015 "negative regulation of
multicellular organism growth" evidence=IMP] [GO:0048477
"oogenesis" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0000781 "chromosome, telomeric region" evidence=IDA]
[GO:0031581 "hemidesmosome assembly" evidence=IGI] [GO:0000398
"mRNA splicing, via spliceosome" evidence=ISS] [GO:0003723 "RNA
binding" evidence=ISS] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
GO:GO:0008340 GO:GO:0009792 GO:GO:0002009 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0048477 GO:GO:0003723 GO:GO:0040035 GO:GO:0030529
GO:GO:0040015 GO:GO:0000398 GO:GO:0000781 eggNOG:COG0724
GO:GO:0031581 GeneTree:ENSGT00700000104255 KO:K12741 EMBL:D10877
EMBL:FO081370 PIR:S35500 RefSeq:NP_001023199.1
RefSeq:NP_001040944.1 RefSeq:NP_001040945.1 RefSeq:NP_500326.2
UniGene:Cel.7537 ProteinModelPortal:Q22037 SMR:Q22037 IntAct:Q22037
STRING:Q22037 PaxDb:Q22037 PRIDE:Q22037 EnsemblMetazoa:F42A6.7a.1
EnsemblMetazoa:F42A6.7a.2 GeneID:177101 KEGG:cel:CELE_F42A6.7
UCSC:F42A6.7a.1 CTD:177101 WormBase:F42A6.7a WormBase:F42A6.7b
WormBase:F42A6.7c WormBase:F42A6.7d InParanoid:Q22037 OMA:YGGGWGQ
NextBio:895332 Uniprot:Q22037
Length = 346
Score = 128 (50.1 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 35/82 (42%), Positives = 46/82 (56%)
Query: 549 KIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKHEKSAAAA 608
KIFVGGL D + ++ + FG I D V T K+S RGFGFVTF + AA
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQ-FGEITDIIVMRDPTTKRS--RGFGFVTFSGKTEVDAA 80
Query: 609 VQARFVTIMGKEVEIKSAVPKE 630
++ R I GK V+ K AVP++
Sbjct: 81 MKQRPHIIDGKTVDPKRAVPRD 102
>UNIPROTKB|F1PRD8 [details] [associations]
symbol:ANK1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007165 "signal transduction" evidence=IEA]
InterPro:IPR000488 Pfam:PF00531 InterPro:IPR002110 Pfam:PF00023
PRINTS:PR01415 PROSITE:PS50017 PROSITE:PS50088 SMART:SM00005
SMART:SM00248 GO:GO:0007165 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 Gene3D:1.10.533.10
InterPro:IPR011029 SUPFAM:SSF47986 InterPro:IPR000906 Pfam:PF00791
SMART:SM00218 PROSITE:PS51145 GeneTree:ENSGT00700000104348
EMBL:AAEX03010380 Ensembl:ENSCAFT00000009193 Uniprot:F1PRD8
Length = 1857
Score = 138 (53.6 bits), Expect = 8.1e-05, Sum P(4) = 8.1e-05
Identities = 45/166 (27%), Positives = 75/166 (45%)
Query: 275 FGAVANGSCTDKKVGPPLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKT 334
+G AN PL LA Q G +++ +LL + G + LH L
Sbjct: 618 YGGSANAESVQGVT--PLHLAAQEGHAEMVALLLSKQANGNLGNKS---GLTPLH--LVA 670
Query: 335 SMGLSQHILQNRIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINL 394
G H+ + +L+KHG V ++G T LH+A+ GN + ++ L++ + D +N
Sbjct: 671 QEG---HV---PVADVLIKHGVTVDATTRMGYTPLHVASHYGNIKLVKFLLQHQAD-VNA 723
Query: 395 KTIMMETPLFFAVKNDHMVCAEVLLRWGANSEVLNLRRERPIDFAK 440
KT +PL A + H +LL+ GA+ ++ P+ AK
Sbjct: 724 KTKQGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSNGTTPLAIAK 769
Score = 68 (29.0 bits), Expect = 8.1e-05, Sum P(4) = 8.1e-05
Identities = 20/67 (29%), Positives = 37/67 (55%)
Query: 61 LRVSCIFDSVSCATSLVNGDLGPVALVNEVEESSGMTALHLAAESHTARCVELLLKKRAR 120
L ++ +++++ A L+N A VN ++ G+T LH+A+ V LLL + A+
Sbjct: 204 LHIAAHYENLNVAQLLLNRG----ASVNFTPQN-GITPLHIASRRGNVIMVRLLLDRGAQ 258
Query: 121 TDIRSKD 127
+ R+KD
Sbjct: 259 IETRTKD 265
Score = 64 (27.6 bits), Expect = 0.00020, Sum P(4) = 0.00019
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 94 SGMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
+G T LH+A + + R +ELLLK A D ++ G
Sbjct: 364 NGFTPLHIACKKNHIRVMELLLKTGASIDAVTESG 398
Score = 62 (26.9 bits), Expect = 0.00030, Sum P(4) = 0.00030
Identities = 18/68 (26%), Positives = 29/68 (42%)
Query: 61 LRVSCIFDSVSCATSLVNGDLGPVALVNEVEESSGMTALHLAAESHTARCVELLLKKRAR 120
L ++ D A L+ D P +V +G T LH+AA +LLL + A
Sbjct: 171 LHIAARNDDTRTAAVLLQNDPNP-----DVLSKTGFTPLHIAAHYENLNVAQLLLNRGAS 225
Query: 121 TDIRSKDG 128
+ ++G
Sbjct: 226 VNFTPQNG 233
Score = 61 (26.5 bits), Expect = 0.00038, Sum P(4) = 0.00038
Identities = 14/44 (31%), Positives = 25/44 (56%)
Query: 85 ALVNEVEESSGMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
A VN + G T L++AA+ + V+ LL+ A ++ ++DG
Sbjct: 96 ANVN-AQSQKGFTPLYMAAQENHLEVVKFLLENGANQNVATEDG 138
Score = 60 (26.2 bits), Expect = 0.00047, Sum P(4) = 0.00047
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 95 GMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
G T LH+AA+ R ELLL + A + K+G
Sbjct: 530 GFTPLHVAAKYGKVRVAELLLGRDAHPNAAGKNG 563
Score = 60 (26.2 bits), Expect = 0.00047, Sum P(4) = 0.00047
Identities = 11/34 (32%), Positives = 20/34 (58%)
Query: 89 EVEESSGMTALHLAAESHTARCVELLLKKRARTD 122
+ + +G++ +H+AA+ CV LLL+ A D
Sbjct: 293 QAKTKNGLSPIHMAAQGDHLDCVRLLLQYNAEID 326
Score = 59 (25.8 bits), Expect = 0.00058, Sum P(4) = 0.00058
Identities = 19/58 (32%), Positives = 28/58 (48%)
Query: 73 ATSLVNGDLGPVA-LVNEVEESS-GMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
A +L G VA L+N + + ALH+AA + R +LL+ D+ SK G
Sbjct: 143 AVALQQGHENVVAHLINYGTKGKVRLPALHIAARNDDTRTAAVLLQNDPNPDVLSKTG 200
Score = 40 (19.1 bits), Expect = 8.1e-05, Sum P(4) = 8.1e-05
Identities = 16/58 (27%), Positives = 26/58 (44%)
Query: 462 NQEKQNASLESDEDISGTCEALLSMVDDNSNTERICSGTKIEVCKYYESHSGCIRGSK 519
++E + AS E DED S + + DN + T V ++ G +RGS+
Sbjct: 875 SEEPEQASKEYDED-SLIPSSPATETSDNISPVASPVHTGFLVSFMVDARGGSMRGSR 931
Score = 38 (18.4 bits), Expect = 8.1e-05, Sum P(4) = 8.1e-05
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 608 AVQARFVTIMGKEVEIKSAVPKEVLFAEL 636
A F T++ KE+ + K V+FA++
Sbjct: 1221 AEAVNFATLLYKELTAVPYMAKFVIFAKM 1249
>UNIPROTKB|K7GLA8 [details] [associations]
symbol:ANK3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007165 "signal transduction" evidence=IEA]
InterPro:IPR000488 Pfam:PF00531 InterPro:IPR002110 Pfam:PF00023
PRINTS:PR01415 PROSITE:PS50017 PROSITE:PS50088 SMART:SM00005
SMART:SM00248 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 Gene3D:1.10.533.10
InterPro:IPR011029 SUPFAM:SSF47986 InterPro:IPR000906 Pfam:PF00791
SMART:SM00218 PROSITE:PS51145 GeneTree:ENSGT00700000104348
EMBL:CT737293 EMBL:CT954264 EMBL:CU407043 EMBL:FP565261
Ensembl:ENSSSCT00000035859 Uniprot:K7GLA8
Length = 1847
Score = 131 (51.2 bits), Expect = 8.3e-05, Sum P(2) = 8.3e-05
Identities = 82/354 (23%), Positives = 134/354 (37%)
Query: 95 GMTALHLAAESHTARCVELLLKKRARTDIRSKDGXXXXXXXXXXXXXXMDVIWNPDEYSV 154
G TALH+A+ + A V++L+ A + +S++G + V + D +
Sbjct: 69 GNTALHIASLAGQAEVVKVLVTNGANVNAQSQNGFTPLYMAAQENHLEV-VKFLLDNGAS 127
Query: 155 EDLVVILGQKNLTTVKLLSQKTKELDEVAYANXXXXXXXXXXXXXXXXXDKVNESILVL- 213
+ L G L L Q ++ + N D + L+L
Sbjct: 128 QSLATEDGFTPLAVA--LQQGHDQVVSLLLENDTKGKVRLPALHIAARKDDTKAAALLLQ 185
Query: 214 HDSDLGAKEKTTI--------YECVIREALALGRATKLQRAVKRNSTPTTSQSAEKRKXX 265
+D++ + K+ Y + L L RA + + + TP A KR
Sbjct: 186 NDNNADVESKSGFTPLHIAAHYGNINVATLLLNRAAAVDFTARNDITPL--HVASKRGNA 243
Query: 266 XXXXXXXXXFGAVANGSCTDKKVGPPLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGN 325
GA + D PL ++G E V+E+LL G
Sbjct: 244 NMVKLLLDR-GAKIDAKTRDGLT--PLHCGARSGHEQVVEMLLDR---AAPILSKTKNGL 297
Query: 326 SALHCALKTSMGLSQHILQNRIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLI 385
S LH A + H+ V +LL+H V LTALH+AA G+ + + L+
Sbjct: 298 SPLHMATQ-----GDHL---NCVQLLLQHNVPVDDVTNDYLTALHVAAHCGHYKVAKVLL 349
Query: 386 RKEPDCINLKTIMMETPLFFAVKNDHMVCAEVLLRWGANSEVLNLRRERPIDFA 439
K+ + N K + TPL A K + + E+LL+ GA+ + + PI A
Sbjct: 350 DKKANP-NAKALNGFTPLHIACKKNRIKVMELLLKHGASIQAVTESGLTPIHVA 402
Score = 109 (43.4 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 45/166 (27%), Positives = 71/166 (42%)
Query: 275 FGAVANGSCTDKKVGPPLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKT 334
+GA AN + T + + + LA Q G D++ +LL G + LH A
Sbjct: 615 YGADAN-AVTRQGIAS-VHLAAQEGHVDMVSLLLSRNANVNLSNKS---GLTPLHLA--- 666
Query: 335 SMGLSQHILQNRIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINL 394
+Q N + +L+ GA V Q K+G T LH+ GN + + L++ +N
Sbjct: 667 ----AQEDRVN-VAEVLVNQGAHVDAQTKMGYTPLHVGCHYGNIKIVNFLLQHSAK-VNA 720
Query: 395 KTIMMETPLFFAVKNDHMVCAEVLLRWGANSEVLNLRRERPIDFAK 440
KT TPL A + H VLL+ A+ L + + A+
Sbjct: 721 KTKNGYTPLHQAAQQGHTHIINVLLQNDASPNELTVNGNTALAIAR 766
Score = 108 (43.1 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 43/170 (25%), Positives = 67/170 (39%)
Query: 276 GAVANGSCTDKKVGPPLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKTS 335
GA D + PL ++ + G D+++ LL+ G + LH + +
Sbjct: 451 GAQVEAKAKDDQT--PLHISARLGKADIVQQLLQQ---GASPNAATTSGYTPLHLSAREG 505
Query: 336 MGLSQHILQNRIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKE--PDCIN 393
H + LL HGA +S K G T LH+AA G + L++K PD
Sbjct: 506 -----H---EDVAAFLLDHGASLSITTKKGFTPLHVAAKYGKLEVANLLLQKSASPDAAG 557
Query: 394 LKTIMMETPLFFAVKNDHMVCAEVLLRWGANSEVLNLRRERPIDFAKSQD 443
+ TPL A D+ A +LL GA+ P+ A ++
Sbjct: 558 KSGL---TPLHVAAHYDNQKVALLLLDQGASPHAAAKNGYTPLHIAAKKN 604
Score = 108 (43.1 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 66/247 (26%), Positives = 99/247 (40%)
Query: 276 GAVANGSCTDKKVGPPLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKTS 335
GA N + T PL L+ + G EDV LL G + LH A K
Sbjct: 484 GASPNAATTSGYT--PLHLSAREGHEDVAAFLLDH---GASLSITTKKGFTPLHVAAKYG 538
Query: 336 MGLSQHILQNRIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLK 395
L+ + +LL+ A K GLT LH+AA N Q + L+ + +
Sbjct: 539 K------LE--VANLLLQKSASPDAAGKSGLTPLHVAAHYDN-QKVALLLLDQGASPHAA 589
Query: 396 TIMMETPLFFAVKNDHMVCAEVLLRWGANSEVLNLRRERPIDFAKSQ---DMRFLLKAAN 452
TPL A K + M A LL +GA++ + + + A + DM LL + N
Sbjct: 590 AKNGYTPLHIAAKKNQMDIATTLLEYGADANAVTRQGIASVHLAAQEGHVDMVSLLLSRN 649
Query: 453 TCHTNLAFLNQEKQNA-SLESDEDISGTCEALLSMVDDNSNTERICSGTKIEVCKYYESH 511
+ NL+ N+ L + ED E L V+ ++ + + TK+ Y H
Sbjct: 650 A-NVNLS--NKSGLTPLHLAAQEDRVNVAEVL---VNQGAHVD---AQTKMG---YTPLH 697
Query: 512 SGCIRGS 518
GC G+
Sbjct: 698 VGCHYGN 704
Score = 81 (33.6 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 22/81 (27%), Positives = 44/81 (54%)
Query: 48 DNADQQTAIVTKLLRVSCIFDSVSCATSLVNGDLGPVALVNEVEESSGMTALHLAAESHT 107
+NAD ++ L ++ + +++ AT L+N A + + +T LH+A++
Sbjct: 188 NNADVESKSGFTPLHIAAHYGNINVATLLLNR-----AAAVDFTARNDITPLHVASKRGN 242
Query: 108 ARCVELLLKKRARTDIRSKDG 128
A V+LLL + A+ D +++DG
Sbjct: 243 ANMVKLLLDRGAKIDAKTRDG 263
Score = 60 (26.2 bits), Expect = 8.3e-05, Sum P(2) = 8.3e-05
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 94 SGMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
+G+ ALHLA++ V LL++ A D +K G
Sbjct: 35 NGLNALHLASKEGHVEVVSELLQREASVDAATKKG 69
>UNIPROTKB|F1SE30 [details] [associations]
symbol:ANK1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0072661 "protein targeting to plasma membrane"
evidence=IEA] [GO:0051117 "ATPase binding" evidence=IEA]
[GO:0048821 "erythrocyte development" evidence=IEA] [GO:0030863
"cortical cytoskeleton" evidence=IEA] [GO:0030507 "spectrin
binding" evidence=IEA] [GO:0015672 "monovalent inorganic cation
transport" evidence=IEA] [GO:0014731 "spectrin-associated
cytoskeleton" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0006779
"porphyrin-containing compound biosynthetic process" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] InterPro:IPR000488 Pfam:PF00531
InterPro:IPR002110 Pfam:PF00023 PRINTS:PR01415 PROSITE:PS50017
PROSITE:PS50088 SMART:SM00005 SMART:SM00248 GO:GO:0005886
GO:GO:0007165 GO:GO:0030863 GO:GO:0014731 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
GO:GO:0006779 GO:GO:0006888 Gene3D:1.10.533.10 InterPro:IPR011029
SUPFAM:SSF47986 OMA:CRIITTD GO:GO:0048821 GO:GO:0015672
GO:GO:0072661 InterPro:IPR000906 Pfam:PF00791 SMART:SM00218
PROSITE:PS51145 GeneTree:ENSGT00700000104348 EMBL:CU606939
EMBL:CU627979 EMBL:CU407001 Ensembl:ENSSSCT00000007691
Uniprot:F1SE30
Length = 1885
Score = 141 (54.7 bits), Expect = 8.4e-05, Sum P(4) = 8.4e-05
Identities = 52/210 (24%), Positives = 95/210 (45%)
Query: 275 FGAVANGSCTDKKVGPPLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKT 334
+G AN PL LA Q G +++ +LL + G + LH L
Sbjct: 657 YGGSANAESVQGVT--PLHLAAQEGHAEMVALLLSKQANGNLGNKS---GLTPLH--LVA 709
Query: 335 SMGLSQHILQNRIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINL 394
G H+ + +L+KHG V ++G T LH+A+ GN + ++ L++ + D +N
Sbjct: 710 QEG---HV---PVADVLIKHGVTVDATTRMGYTPLHVASHYGNIKLVKFLLQHQAD-VNA 762
Query: 395 KTIMMETPLFFAVKNDHMVCAEVLLRWGANSEVLNLRRERPIDFAKSQ---DMRFLLKAA 451
KT + +PL A + H +LL+ GA+ ++ P+ AK + +LK
Sbjct: 763 KTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSNGTTPLAIAKRLGYISVTDVLKVV 822
Query: 452 NTCHTNLAFLNQEKQNASLESDEDISGTCE 481
T T++ ++ + + + E+ ++I E
Sbjct: 823 -TDETSVVLISDKHRMSFPETVDEILDVSE 851
Score = 68 (29.0 bits), Expect = 8.4e-05, Sum P(4) = 8.4e-05
Identities = 20/67 (29%), Positives = 37/67 (55%)
Query: 61 LRVSCIFDSVSCATSLVNGDLGPVALVNEVEESSGMTALHLAAESHTARCVELLLKKRAR 120
L ++ +++++ A L+N A VN ++ G+T LH+A+ V LLL + A+
Sbjct: 243 LHIAAHYENLNVAQLLLNRG----ASVNFTPQN-GITPLHIASRRGNVIMVRLLLDRGAQ 297
Query: 121 TDIRSKD 127
+ R+KD
Sbjct: 298 IETRTKD 304
Score = 64 (27.6 bits), Expect = 0.00020, Sum P(4) = 0.00020
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 94 SGMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
+G T LH+A + + R +ELLLK A D ++ G
Sbjct: 403 NGFTPLHIACKKNHIRVMELLLKTGASIDAVTESG 437
Score = 62 (26.9 bits), Expect = 0.00031, Sum P(4) = 0.00031
Identities = 18/68 (26%), Positives = 29/68 (42%)
Query: 61 LRVSCIFDSVSCATSLVNGDLGPVALVNEVEESSGMTALHLAAESHTARCVELLLKKRAR 120
L ++ D A L+ D P +V +G T LH+AA +LLL + A
Sbjct: 210 LHIAARNDDTRTAAVLLQNDPNP-----DVLSKTGFTPLHIAAHYENLNVAQLLLNRGAS 264
Query: 121 TDIRSKDG 128
+ ++G
Sbjct: 265 VNFTPQNG 272
Score = 61 (26.5 bits), Expect = 0.00039, Sum P(4) = 0.00039
Identities = 14/44 (31%), Positives = 25/44 (56%)
Query: 85 ALVNEVEESSGMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
A VN + G T L++AA+ + V+ LL+ A ++ ++DG
Sbjct: 135 ANVN-AQSQKGFTPLYMAAQENHLEVVKFLLENGANQNVATEDG 177
Score = 60 (26.2 bits), Expect = 0.00048, Sum P(4) = 0.00048
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 95 GMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
G T LH+AA+ R ELLL+ A + K+G
Sbjct: 569 GFTPLHVAAKYGKVRVAELLLEHDAHPNAAGKNG 602
Score = 60 (26.2 bits), Expect = 0.00048, Sum P(4) = 0.00048
Identities = 11/34 (32%), Positives = 20/34 (58%)
Query: 89 EVEESSGMTALHLAAESHTARCVELLLKKRARTD 122
+ + +G++ +H+AA+ CV LLL+ A D
Sbjct: 332 QAKTKNGLSPIHMAAQGDHLDCVRLLLQYNAEID 365
Score = 59 (25.8 bits), Expect = 0.00060, Sum P(4) = 0.00060
Identities = 19/58 (32%), Positives = 28/58 (48%)
Query: 73 ATSLVNGDLGPVA-LVNEVEESS-GMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
A +L G VA L+N + + ALH+AA + R +LL+ D+ SK G
Sbjct: 182 AVALQQGHENVVAHLINYGTKGKVRLPALHIAARNDDTRTAAVLLQNDPNPDVLSKTG 239
Score = 38 (18.4 bits), Expect = 8.4e-05, Sum P(4) = 8.4e-05
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 608 AVQARFVTIMGKEVEIKSAVPKEVLFAEL 636
A F T++ KE+ + K V+FA++
Sbjct: 1252 AEAVNFATLLYKELTAVPYMAKFVIFAKM 1280
Score = 37 (18.1 bits), Expect = 8.4e-05, Sum P(4) = 8.4e-05
Identities = 10/39 (25%), Positives = 18/39 (46%)
Query: 779 GYSKLSDFLRTLPDLCHVKAGPIGKNGSPNHMVLVPSPP 817
GYS L D L + L + P+ + N + ++ + P
Sbjct: 1536 GYSSLQDELLSPASLHYALPSPLRADQYWNEVAVIDAIP 1574
>UNIPROTKB|F1M5N1 [details] [associations]
symbol:F1M5N1 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 IPI:IPI00567689
ProteinModelPortal:F1M5N1 Ensembl:ENSRNOT00000023344 Uniprot:F1M5N1
Length = 207
Score = 122 (48.0 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 33/82 (40%), Positives = 46/82 (56%)
Query: 549 KIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKHEKSAAAA 608
K+F+GGL F +SL +FE+ +G + D V K+S RGFGFVT+ + AA
Sbjct: 11 KLFIGGLSFETTDESLRSHFEQ-WGTLTDCVVMRDPNTKRS--RGFGFVTYATVEEVDAA 67
Query: 609 VQARFVTIMGKEVEIKSAVPKE 630
+ AR + G+ VE K AV E
Sbjct: 68 MNARPHKVDGRVVEPKRAVSIE 89
>UNIPROTKB|Q28521 [details] [associations]
symbol:HNRNPA1 "Heterogeneous nuclear ribonucleoprotein A1"
species:9544 "Macaca mulatta" [GO:0030529 "ribonucleoprotein
complex" evidence=ISS] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005737
GO:GO:0008380 GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330
GO:GO:0005681 GO:GO:0003723 GO:GO:0030529 GO:GO:0051028
eggNOG:COG0724 HOVERGEN:HBG002295 HOGENOM:HOG000234442 KO:K12741
OrthoDB:EOG4HQDKF InterPro:IPR021662 Pfam:PF11627 CTD:3178
EMBL:M84334 PIR:S30192 RefSeq:NP_001036248.1 UniGene:Mmu.4980
ProteinModelPortal:Q28521 SMR:Q28521 STRING:Q28521 PRIDE:Q28521
GeneID:702977 KEGG:mcc:702977 InParanoid:Q28521 NextBio:19966247
Uniprot:Q28521
Length = 320
Score = 127 (49.8 bits), Expect = 8.8e-05, P = 8.8e-05
Identities = 33/82 (40%), Positives = 47/82 (57%)
Query: 549 KIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKHEKSAAAA 608
K+F+GGL F +SL +FE+ +G + D V K+S RGFGFVT+ + AA
Sbjct: 15 KLFIGGLSFETTDESLRSHFEQ-WGTLTDCVVMRDPNTKRS--RGFGFVTYATVEKVDAA 71
Query: 609 VQARFVTIMGKEVEIKSAVPKE 630
+ AR + G+ VE K AV +E
Sbjct: 72 MNARPHKVDGRVVEPKRAVSRE 93
Score = 118 (46.6 bits), Expect = 0.00088, P = 0.00088
Identities = 32/92 (34%), Positives = 47/92 (51%)
Query: 549 KIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQS-VSRGFGFVTFKHEKSAAA 607
KIFVGG+ + L YFE+ +G IE V E T++ S RGF FVTF S
Sbjct: 106 KIFVGGIKEDTEEHHLRDYFEQ-YGKIE---VIEIMTDRGSGKKRGFAFVTFDDHNSVDK 161
Query: 608 AVQARFVTIMGKEVEIKSAVPKEVLFAELQKQ 639
V ++ T+ G E++ A+ K+ + + Q
Sbjct: 162 IVIQKYHTVNGHNCEVRKALSKQEMASASSSQ 193
>UNIPROTKB|P09867 [details] [associations]
symbol:HNRNPA1 "Heterogeneous nuclear ribonucleoprotein A1"
species:9913 "Bos taurus" [GO:0030529 "ribonucleoprotein complex"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000380
"alternative mRNA splicing, via spliceosome" evidence=IEA]
[GO:0051028 "mRNA transport" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005737 GO:GO:0005654 GO:GO:0005730
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0003697
GO:GO:0030529 GO:GO:0051028 GO:GO:0071013 GO:GO:0051168
eggNOG:COG0724 GO:GO:0000380 HOVERGEN:HBG002295 GO:GO:0051170
HOGENOM:HOG000234442 KO:K12741 OrthoDB:EOG4HQDKF InterPro:IPR021662
Pfam:PF11627 EMBL:BC105413 IPI:IPI00692235 PIR:A27241
RefSeq:NP_001039376.1 UniGene:Bt.88002 ProteinModelPortal:P09867
SMR:P09867 STRING:P09867 PRIDE:P09867 Ensembl:ENSBTAT00000002033
GeneID:505093 KEGG:bta:505093 CTD:3178 GeneTree:ENSGT00550000074566
OMA:IEVEIMT BindingDB:P09867 NextBio:20866978 Uniprot:P09867
Length = 320
Score = 127 (49.8 bits), Expect = 8.8e-05, P = 8.8e-05
Identities = 33/82 (40%), Positives = 47/82 (57%)
Query: 549 KIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKHEKSAAAA 608
K+F+GGL F +SL +FE+ +G + D V K+S RGFGFVT+ + AA
Sbjct: 15 KLFIGGLSFETTDESLRSHFEQ-WGTLTDCVVMRDPNTKRS--RGFGFVTYATVEEVDAA 71
Query: 609 VQARFVTIMGKEVEIKSAVPKE 630
+ AR + G+ VE K AV +E
Sbjct: 72 MNARPHKVDGRVVEPKRAVSRE 93
>UNIPROTKB|F8W6I7 [details] [associations]
symbol:HNRNPA1 "Heterogeneous nuclear ribonucleoprotein A1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0045111
"intermediate filament cytoskeleton" evidence=IDA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005737 GO:GO:0005730 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0045111 InterPro:IPR021662
Pfam:PF11627 EMBL:AC078778 HGNC:HGNC:5031 ChiTaRS:HNRNPA1
IPI:IPI01021324 ProteinModelPortal:F8W6I7 SMR:F8W6I7 PRIDE:F8W6I7
Ensembl:ENST00000330752 ArrayExpress:F8W6I7 Bgee:F8W6I7
Uniprot:F8W6I7
Length = 320
Score = 127 (49.8 bits), Expect = 8.8e-05, P = 8.8e-05
Identities = 33/82 (40%), Positives = 47/82 (57%)
Query: 549 KIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKHEKSAAAA 608
K+F+GGL F +SL +FE+ +G + D V K+S RGFGFVT+ + AA
Sbjct: 15 KLFIGGLSFETTDESLRSHFEQ-WGTLTDCVVMRDPNTKRS--RGFGFVTYATVEEVDAA 71
Query: 609 VQARFVTIMGKEVEIKSAVPKE 630
+ AR + G+ VE K AV +E
Sbjct: 72 MNARPHKVDGRVVEPKRAVSRE 93
>UNIPROTKB|Q32P51 [details] [associations]
symbol:HNRNPA1L2 "Heterogeneous nuclear ribonucleoprotein
A1-like 2" species:9606 "Homo sapiens" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0051028 "mRNA
transport" evidence=IEA] [GO:0000380 "alternative mRNA splicing,
via spliceosome" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0005737 GO:GO:0008380
GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0005681
GO:GO:0003723 GO:GO:0051028 eggNOG:COG0724 HSSP:Q61474
EMBL:CH471124 EMBL:AK123159 EMBL:AL137058 EMBL:BC108266
IPI:IPI00879501 RefSeq:NP_001011724.1 RefSeq:NP_001011725.1
UniGene:Hs.447506 ProteinModelPortal:Q32P51 SMR:Q32P51
IntAct:Q32P51 STRING:Q32P51 PhosphoSite:Q32P51 DMDM:190356061
PaxDb:Q32P51 PRIDE:Q32P51 Ensembl:ENST00000342657
Ensembl:ENST00000357495 Ensembl:ENST00000398039 GeneID:144983
KEGG:hsa:144983 UCSC:uc001vgx.1 CTD:144983 GeneCards:GC13P053192
HGNC:HGNC:27067 neXtProt:NX_Q32P51 PharmGKB:PA164720701
HOGENOM:HOG000234442 InParanoid:Q32P51 KO:K12741 OMA:HYGSIVD
OrthoDB:EOG4HQDKF GenomeRNAi:144983 NextBio:85023 Bgee:Q32P51
Genevestigator:Q32P51 InterPro:IPR021662 Pfam:PF11627
Uniprot:Q32P51
Length = 320
Score = 127 (49.8 bits), Expect = 8.8e-05, P = 8.8e-05
Identities = 33/96 (34%), Positives = 50/96 (52%)
Query: 549 KIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQS-VSRGFGFVTFKHEKSAAA 607
KIFVGG+ + L YFE+ +G IE V E T++ S RGF FVTF S
Sbjct: 106 KIFVGGIKEDTEEHHLRDYFEQ-YGKIE---VIEIMTDRGSGKKRGFAFVTFDDHDSVDK 161
Query: 608 AVQARFVTIMGKEVEIKSAVPKEVLFAELQKQSAQQ 643
V ++ T+ G E++ A+PK+ + + Q ++
Sbjct: 162 IVIQKYHTVKGHNCEVRKALPKQEMASASSSQRGRR 197
>UNIPROTKB|Q06A94 [details] [associations]
symbol:HNRNPA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0000380
"alternative mRNA splicing, via spliceosome" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0005737 GO:GO:0005654 GO:GO:0005730 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003697 GO:GO:0071013 GO:GO:0051168
eggNOG:COG0724 GO:GO:0000380 HOVERGEN:HBG002295 GO:GO:0051170
HOGENOM:HOG000234442 KO:K12741 OrthoDB:EOG4HQDKF InterPro:IPR021662
Pfam:PF11627 CTD:3178 GeneTree:ENSGT00550000074566 OMA:IEVEIMT
EMBL:CU694683 EMBL:DQ972970 RefSeq:NP_001070686.1 UniGene:Ssc.49600
SMR:Q06A94 Ensembl:ENSSSCT00000000309 GeneID:768103 KEGG:ssc:768103
Uniprot:Q06A94
Length = 320
Score = 127 (49.8 bits), Expect = 8.8e-05, P = 8.8e-05
Identities = 33/82 (40%), Positives = 47/82 (57%)
Query: 549 KIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKHEKSAAAA 608
K+F+GGL F +SL +FE+ +G + D V K+S RGFGFVT+ + AA
Sbjct: 15 KLFIGGLSFETTDESLRSHFEQ-WGTLTDCVVMRDPNTKRS--RGFGFVTYATVEEVDAA 71
Query: 609 VQARFVTIMGKEVEIKSAVPKE 630
+ AR + G+ VE K AV +E
Sbjct: 72 MNARPHKVDGRVVEPKRAVSRE 93
>UNIPROTKB|A5A6H4 [details] [associations]
symbol:HNRNPA1 "Heterogeneous nuclear ribonucleoprotein A1"
species:9598 "Pan troglodytes" [GO:0030529 "ribonucleoprotein
complex" evidence=ISS] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005737
GO:GO:0008380 GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330
GO:GO:0005681 GO:GO:0003723 GO:GO:0030529 GO:GO:0051028
eggNOG:COG0724 HOVERGEN:HBG002295 HOGENOM:HOG000234442 KO:K12741
OrthoDB:EOG4HQDKF InterPro:IPR021662 Pfam:PF11627 CTD:3178
GeneTree:ENSGT00550000074566 OMA:IEVEIMT EMBL:AB222102
EMBL:AL954201 RefSeq:NP_001091892.1 RefSeq:NP_001184040.1
RefSeq:XP_003318234.1 RefSeq:XP_003954396.1 UniGene:Ptr.6288
UniGene:Ptr.6435 ProteinModelPortal:A5A6H4 SMR:A5A6H4 PRIDE:A5A6H4
Ensembl:ENSPTRT00000010845 GeneID:100615525 GeneID:739306
GeneID:747284 KEGG:ptr:100615525 KEGG:ptr:739306 KEGG:ptr:747284
CTD:739306 InParanoid:A5A6H4 BindingDB:A5A6H4 NextBio:20906554
Uniprot:A5A6H4
Length = 320
Score = 127 (49.8 bits), Expect = 8.8e-05, P = 8.8e-05
Identities = 33/82 (40%), Positives = 47/82 (57%)
Query: 549 KIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKHEKSAAAA 608
K+F+GGL F +SL +FE+ +G + D V K+S RGFGFVT+ + AA
Sbjct: 15 KLFIGGLSFETTDESLRSHFEQ-WGTLTDCVVMRDPNTKRS--RGFGFVTYATVEEVDAA 71
Query: 609 VQARFVTIMGKEVEIKSAVPKE 630
+ AR + G+ VE K AV +E
Sbjct: 72 MNARPHKVDGRVVEPKRAVSRE 93
>MGI|MGI:104820 [details] [associations]
symbol:Hnrnpa1 "heterogeneous nuclear ribonucleoprotein A1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000380 "alternative mRNA splicing, via
spliceosome" evidence=IDA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003697 "single-stranded DNA binding"
evidence=ISO] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005654 "nucleoplasm" evidence=ISO]
[GO:0005681 "spliceosomal complex" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0008380
"RNA splicing" evidence=IDA] [GO:0030529 "ribonucleoprotein
complex" evidence=ISO] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0051168 "nuclear export" evidence=ISO] [GO:0051170 "nuclear
import" evidence=ISO] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 MGI:MGI:104820 GO:GO:0005737
GO:GO:0005654 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0005681
GO:GO:0003723 GO:GO:0003697 GO:GO:0051028 GO:GO:0051168
eggNOG:COG0724 GO:GO:0000380 HOVERGEN:HBG002295 GO:GO:0051170
HOGENOM:HOG000234442 KO:K12741 OrthoDB:EOG4HQDKF InterPro:IPR021662
Pfam:PF11627 CTD:3178 GeneTree:ENSGT00550000074566 ChiTaRS:HNRNPA1
EMBL:M99167 EMBL:D86729 EMBL:D86728 EMBL:AK007802 EMBL:AK088308
EMBL:AK131999 EMBL:AK135391 EMBL:AK161730 EMBL:AK166901
EMBL:AK167161 EMBL:AK167810 EMBL:AK167913 EMBL:AK168420
EMBL:AK168531 EMBL:BC080675 EMBL:BC083136 IPI:IPI00553777
IPI:IPI00817004 PIR:A44485 RefSeq:NP_034577.1 UniGene:Mm.237064
UniGene:Mm.432031 ProteinModelPortal:P49312 SMR:P49312
IntAct:P49312 STRING:P49312 PhosphoSite:P49312 PaxDb:P49312
PRIDE:P49312 Ensembl:ENSMUST00000087351 GeneID:15382 KEGG:mmu:15382
UCSC:uc007xxp.1 UCSC:uc012aah.1 BindingDB:P49312 NextBio:288050
Bgee:P49312 CleanEx:MM_HNRNPA1 Genevestigator:P49312
GermOnline:ENSMUSG00000058922 Uniprot:P49312
Length = 320
Score = 127 (49.8 bits), Expect = 8.8e-05, P = 8.8e-05
Identities = 33/82 (40%), Positives = 47/82 (57%)
Query: 549 KIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKHEKSAAAA 608
K+F+GGL F +SL +FE+ +G + D V K+S RGFGFVT+ + AA
Sbjct: 15 KLFIGGLSFETTDESLRSHFEQ-WGTLTDCVVMRDPNTKRS--RGFGFVTYATVEEVDAA 71
Query: 609 VQARFVTIMGKEVEIKSAVPKE 630
+ AR + G+ VE K AV +E
Sbjct: 72 MNARPHKVDGRVVEPKRAVSRE 93
>RGD|69234 [details] [associations]
symbol:Hnrnpa1 "heterogeneous nuclear ribonucleoprotein A1"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000380 "alternative mRNA splicing, via
spliceosome" evidence=ISO] [GO:0003697 "single-stranded DNA binding"
evidence=ISO;ISS;TAS] [GO:0003723 "RNA binding" evidence=TAS]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005654 "nucleoplasm"
evidence=ISO;ISS] [GO:0005681 "spliceosomal complex"
evidence=ISO;ISS] [GO:0005730 "nucleolus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO;ISS] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA;ISO]
[GO:0016070 "RNA metabolic process" evidence=TAS] [GO:0030529
"ribonucleoprotein complex" evidence=ISO;ISS] [GO:0045111
"intermediate filament cytoskeleton" evidence=ISO] [GO:0051028 "mRNA
transport" evidence=IEA] [GO:0051168 "nuclear export"
evidence=ISO;ISS] [GO:0051170 "nuclear import" evidence=ISO;ISS]
[GO:0071013 "catalytic step 2 spliceosome" evidence=ISO]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 RGD:69234 GO:GO:0005737 GO:GO:0005654 GO:GO:0008380
GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0005681
GO:GO:0003723 GO:GO:0003697 GO:GO:0016070 GO:GO:0051028
GO:GO:0051168 eggNOG:COG0724 HOVERGEN:HBG002295 GO:GO:0051170
HOGENOM:HOG000234442 KO:K12741 InterPro:IPR021662 Pfam:PF11627
CTD:3178 EMBL:M12156 IPI:IPI00421500 PIR:A38304 RefSeq:NP_058944.1
UniGene:Rn.25771 ProteinModelPortal:P04256 SMR:P04256 IntAct:P04256
STRING:P04256 PhosphoSite:P04256 PRIDE:P04256 GeneID:29578
KEGG:rno:29578 UCSC:RGD:69234 NextBio:609678 ArrayExpress:P04256
Genevestigator:P04256 GermOnline:ENSRNOG00000036839 Uniprot:P04256
Length = 320
Score = 127 (49.8 bits), Expect = 8.8e-05, P = 8.8e-05
Identities = 33/82 (40%), Positives = 47/82 (57%)
Query: 549 KIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKHEKSAAAA 608
K+F+GGL F +SL +FE+ +G + D V K+S RGFGFVT+ + AA
Sbjct: 15 KLFIGGLSFETTDESLRSHFEQ-WGTLTDCVVMRDPNTKRS--RGFGFVTYATVEEVDAA 71
Query: 609 VQARFVTIMGKEVEIKSAVPKE 630
+ AR + G+ VE K AV +E
Sbjct: 72 MNARPHKVDGRVVEPKRAVSRE 93
>UNIPROTKB|Q5I0M7 [details] [associations]
symbol:Hnrnpa1 "Hnrpa1 protein" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
RGD:69234 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
EMBL:CH474035 eggNOG:COG0724 HOVERGEN:HBG002295 InterPro:IPR021662
Pfam:PF11627 GeneTree:ENSGT00550000074566 IPI:IPI00421500
UniGene:Rn.25771 EMBL:BC088150 SMR:Q5I0M7 STRING:Q5I0M7
Ensembl:ENSRNOT00000055285 Genevestigator:Q5I0M7 Uniprot:Q5I0M7
Length = 320
Score = 127 (49.8 bits), Expect = 8.8e-05, P = 8.8e-05
Identities = 33/82 (40%), Positives = 47/82 (57%)
Query: 549 KIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKHEKSAAAA 608
K+F+GGL F +SL +FE+ +G + D V K+S RGFGFVT+ + AA
Sbjct: 15 KLFIGGLSFETTDESLRSHFEQ-WGTLTDCVVMRDPNTKRS--RGFGFVTYATVEEVDAA 71
Query: 609 VQARFVTIMGKEVEIKSAVPKE 630
+ AR + G+ VE K AV +E
Sbjct: 72 MNARPHKVDGRVVEPKRAVSRE 93
>UNIPROTKB|F1NIB2 [details] [associations]
symbol:HNRNPAB "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0030529
GeneTree:ENSGT00700000104347 OMA:FILFKDP EMBL:AADN02028501
EMBL:AADN02028502 EMBL:AADN02028503 IPI:IPI00574172
Ensembl:ENSGALT00000023234 ArrayExpress:F1NIB2 Uniprot:F1NIB2
Length = 263
Score = 125 (49.1 bits), Expect = 9.1e-05, P = 9.1e-05
Identities = 36/102 (35%), Positives = 51/102 (50%)
Query: 530 RKMNPGMCMIHASTQEFKSKIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQS 589
R ++P M A ++ KIFVGGL + + YF + FG IE + K +
Sbjct: 68 RLIDPKKAM--AMKKDPVKKIFVGGLNPEATEEKIREYFGE-FGEIEAIELP--MDPKTN 122
Query: 590 VSRGFGFVTFKHEKSAAAAVQARFVTIMGKEVEIKSAVPKEV 631
RGF F+TFK E ++ +F + G + EIK A PKEV
Sbjct: 123 KRRGFVFITFKEEDPVKKVLEKKFHNVSGSKCEIKVAQPKEV 164
>MGI|MGI:88025 [details] [associations]
symbol:Ank2 "ankyrin 2, brain" species:10090 "Mus musculus"
[GO:0002027 "regulation of heart rate" evidence=ISO;IMP]
[GO:0003283 "atrial septum development" evidence=ISO] [GO:0005515
"protein binding" evidence=IPI] [GO:0005622 "intracellular"
evidence=ISO;IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IMP;IDA] [GO:0005887 "integral to plasma membrane"
evidence=IDA] [GO:0006874 "cellular calcium ion homeostasis"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=RCA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0008104
"protein localization" evidence=IMP] [GO:0010628 "positive
regulation of gene expression" evidence=ISO;IMP] [GO:0010881
"regulation of cardiac muscle contraction by regulation of the
release of sequestered calcium ion" evidence=ISO;IC;IMP]
[GO:0010882 "regulation of cardiac muscle contraction by calcium
ion signaling" evidence=ISO;IMP] [GO:0014704 "intercalated disc"
evidence=IDA] [GO:0015459 "potassium channel regulator activity"
evidence=IMP] [GO:0016020 "membrane" evidence=IEA] [GO:0016323
"basolateral plasma membrane" evidence=ISO] [GO:0019899 "enzyme
binding" evidence=ISO] [GO:0019901 "protein kinase binding"
evidence=ISO] [GO:0030018 "Z disc" evidence=IDA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0030315 "T-tubule" evidence=IDA]
[GO:0030507 "spectrin binding" evidence=ISO] [GO:0030674 "protein
binding, bridging" evidence=IMP;IDA] [GO:0031430 "M band"
evidence=IMP;IDA] [GO:0031647 "regulation of protein stability"
evidence=IC] [GO:0031672 "A band" evidence=IDA] [GO:0033292
"T-tubule organization" evidence=IMP] [GO:0033365 "protein
localization to organelle" evidence=ISO] [GO:0034394 "protein
localization to cell surface" evidence=IMP] [GO:0034613 "cellular
protein localization" evidence=ISO;IDA;IMP] [GO:0042383
"sarcolemma" evidence=IMP;IDA] [GO:0042981 "regulation of apoptotic
process" evidence=RCA] [GO:0043034 "costamere" evidence=IDA]
[GO:0043268 "positive regulation of potassium ion transport"
evidence=IMP] [GO:0044325 "ion channel binding" evidence=ISO;IPI]
[GO:0045202 "synapse" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IDA] [GO:0050821 "protein stabilization"
evidence=IMP] [GO:0051117 "ATPase binding" evidence=IPI]
[GO:0051279 "regulation of release of sequestered calcium ion into
cytosol" evidence=ISO] [GO:0051924 "regulation of calcium ion
transport" evidence=ISO;IMP] [GO:0051928 "positive regulation of
calcium ion transport" evidence=IMP] [GO:0055117 "regulation of
cardiac muscle contraction" evidence=ISO;IMP] [GO:0060048 "cardiac
muscle contraction" evidence=IMP] [GO:0060307 "regulation of
ventricular cardiac muscle cell membrane repolarization"
evidence=ISO] [GO:0070972 "protein localization to endoplasmic
reticulum" evidence=ISO;IMP] [GO:0072659 "protein localization to
plasma membrane" evidence=ISO;IMP] [GO:0072661 "protein targeting
to plasma membrane" evidence=IGI;IMP] [GO:0086004 "regulation of
cardiac muscle cell contraction" evidence=ISO;IMP] [GO:0086005
"regulation of ventricular cardiac muscle cell action potential"
evidence=ISO] [GO:0086014 "regulation of atrial cardiac muscle cell
action potential" evidence=ISO;IMP] [GO:0086015 "regulation of SA
node cell action potential" evidence=IMP] [GO:0086036 "regulation
of cardiac muscle cell membrane potential" evidence=IGI;IMP]
[GO:0086066 "atrial cardiac muscle cell to AV node cell
communication" evidence=IMP] [GO:0086070 "SA node cell to atrial
cardiac muscle cell communication" evidence=ISO;IMP] [GO:0086091
"regulation of heart rate by cardiac conduction" evidence=ISO;IMP]
[GO:1901018 "positive regulation of potassium ion transmembrane
transporter activity" evidence=IMP] [GO:1901019 "regulation of
calcium ion transmembrane transporter activity" evidence=IMP]
[GO:1901021 "positive regulation of calcium ion transmembrane
transporter activity" evidence=IMP] [GO:2001257 "regulation of
cation channel activity" evidence=IMP] [GO:2001259 "positive
regulation of cation channel activity" evidence=IMP]
InterPro:IPR000488 Pfam:PF00531 InterPro:IPR002110 Pfam:PF00023
PRINTS:PR01415 PROSITE:PS50017 PROSITE:PS50088 SMART:SM00005
SMART:SM00248 MGI:MGI:88025 GO:GO:0048471 GO:GO:0014704
GO:GO:0050821 GO:GO:0005887 GO:GO:0031430 GO:GO:0030018
GO:GO:0005856 eggNOG:COG0666 GO:GO:0016324 GO:GO:0045211
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0016323 GO:GO:0043268 GO:GO:0030674
GO:GO:0015459 GO:GO:0030315 GO:GO:0006874 GO:GO:0060048
GO:GO:0043034 GO:GO:1901018 GO:GO:0010628 GO:GO:2001259
Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986 GO:GO:0034394
KO:K10380 GO:GO:0072661 InterPro:IPR000906 Pfam:PF00791
SMART:SM00218 PROSITE:PS51145 GeneTree:ENSGT00700000104348 CTD:287
HOVERGEN:HBG100442 ChiTaRS:Ank2 GO:GO:0003283 GO:GO:1901021
GO:GO:0051928 GO:GO:0070972 GO:GO:0086014 GO:GO:0010881
GO:GO:0086091 GO:GO:0086005 GO:GO:0060307 GO:GO:0033292
EMBL:AK032060 EMBL:AK036018 EMBL:AK044634 EMBL:AK083111
EMBL:AK083826 EMBL:AK084070 EMBL:AK166115 EMBL:AC102480
EMBL:AC102591 EMBL:AC131744 EMBL:BC043123 EMBL:BC059251
IPI:IPI00225231 IPI:IPI00227235 IPI:IPI00228697 IPI:IPI00404055
IPI:IPI00921617 IPI:IPI00921642 IPI:IPI00921659 IPI:IPI01007831
RefSeq:NP_001029340.1 RefSeq:NP_848770.2 UniGene:Mm.220242
UniGene:Mm.461850 UniGene:Mm.484610 HSSP:P16157
ProteinModelPortal:Q8C8R3 SMR:Q8C8R3 DIP:DIP-58645N IntAct:Q8C8R3
STRING:Q8C8R3 PhosphoSite:Q8C8R3 PaxDb:Q8C8R3 PRIDE:Q8C8R3
Ensembl:ENSMUST00000044443 GeneID:109676 KEGG:mmu:109676
UCSC:uc008rgu.1 UCSC:uc008rgy.1 UCSC:uc008rgz.1 UCSC:uc008rha.1
InParanoid:Q8C8R3 OMA:PEMREES NextBio:362559 Bgee:Q8C8R3
Genevestigator:Q8C8R3 GO:GO:0086015 Uniprot:Q8C8R3
Length = 3898
Score = 125 (49.1 bits), Expect = 9.2e-05, Sum P(4) = 9.2e-05
Identities = 50/166 (30%), Positives = 72/166 (43%)
Query: 275 FGAVANGSCTDKKVGPPLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKT 334
+GA N + T + V PL LA+Q G D++ +LL G ++LH A
Sbjct: 651 YGAETN-TVTKQGV-TPLHLASQEGHTDMVTLLLDK---GANIHMSTKSGLTSLHLA--- 702
Query: 335 SMGLSQHILQNRIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINL 394
+Q N + IL KHGA KLG T L +A GN + + L+++ + +N
Sbjct: 703 ----AQEDKVN-VADILTKHGADRDAYTKLGYTPLIVACHYGNVKMVNFLLKQGAN-VNA 756
Query: 395 KTIMMETPLFFAVKNDHMVCAEVLLRWGANSEVLNLRRERPIDFAK 440
KT TPL A + H VLL+ GA + AK
Sbjct: 757 KTKNGYTPLHQAAQQGHTHIINVLLQHGAKPNATTANGNTALAIAK 802
Score = 76 (31.8 bits), Expect = 9.2e-05, Sum P(4) = 9.2e-05
Identities = 25/86 (29%), Positives = 38/86 (44%)
Query: 47 LDNADQQTAIVTKLLRVSCIFDSVSCATSLV----NGDLGPVALVNEVEESSGMTALHLA 102
L+N D + + L ++ D A L+ N D+ +VN ES G T LH+A
Sbjct: 183 LEN-DTKGKVRLPALHIAARKDDTKSAALLLQNDHNADVQSKMMVNRTTES-GFTPLHIA 240
Query: 103 AESHTARCVELLLKKRARTDIRSKDG 128
A LLL + A D +++G
Sbjct: 241 AHYGNVNVATLLLNRGAAVDFTARNG 266
Score = 58 (25.5 bits), Expect = 9.2e-05, Sum P(4) = 9.2e-05
Identities = 53/216 (24%), Positives = 85/216 (39%)
Query: 693 EATAEKSWAGRLLYGQPKTSSNESQAYLVESFEEKSMPKWLR---TFKKWLPRFLKDVYR 749
E + E S A + G+ + SN+ +A E E++S K L+ KK + R LK+ +
Sbjct: 1626 EKSGETSQASAV--GK-SSESNKGKATSAE--EKQSAQKQLKPGLAIKKPVRRKLKEKQK 1680
Query: 750 HPLEGKYALSSLKTDFKAVCGLE-LDH-ASLGYSKLSDFLRTLPDLCHVKAGPIGKNGSP 807
E + S KT+ K E +D L L T P ++ PIG
Sbjct: 1681 QKEESSQS-SEEKTELKKGSSEESVDEDRGLVPEPLPTAKATSP---LIEETPIGSIKDK 1736
Query: 808 NHMVLVPSPPKQKWGA-LQLSKNGNPSSPVNSASDSNECDRNDSKSPQDLRSVSISS-TI 865
+ +QK + L + G P + ++ SKS ++ SS +
Sbjct: 1737 VKALQKRVEDEQKGRSKLPVRVKGKEDVPKRTTPRTHPAVSPSSKSSTSSKAERHSSLSS 1796
Query: 866 ERKPTNEVPKGSSSQRDTSTSAISASKKVIDYSTIF 901
KP P SS+ + S +S S K +S +F
Sbjct: 1797 SAKPERHTPVSPSSKNE-KLSPVSPSAKTERHSPVF 1831
Score = 51 (23.0 bits), Expect = 0.00098, Sum P(5) = 0.00098
Identities = 15/63 (23%), Positives = 29/63 (46%)
Query: 839 ASDSN-ECDRNDSKSPQDLRSVSISSTIERKPTNEVPKGSSSQRDTSTSAISASKKVIDY 897
ASD+N + S S + ++S+ +E PT + S+ + T A+ +D+
Sbjct: 3152 ASDANIDSQVIISASTETPTKEAVSTAVEEPPTTQRSDSLSTVKQTPRPAVPGPVGQLDF 3211
Query: 898 STI 900
S +
Sbjct: 3212 SPV 3214
Score = 41 (19.5 bits), Expect = 0.00098, Sum P(5) = 0.00098
Identities = 10/30 (33%), Positives = 18/30 (60%)
Query: 620 EVEIKSAVPKEVLFAELQKQSAQQQESKHE 649
E E+ V K F EL++++ Q+++ K E
Sbjct: 2544 EEEMFKMVTKIKTFDELEQEAKQKRDYKKE 2573
Score = 38 (18.4 bits), Expect = 9.2e-05, Sum P(4) = 9.2e-05
Identities = 7/26 (26%), Positives = 13/26 (50%)
Query: 1012 EHLCVICDKKVEDIMLISNPEEFPPL 1037
+ LC +KK ++ S + PP+
Sbjct: 3637 DELCAAKEKKEQEASKESESSDHPPM 3662
>UNIPROTKB|F1PRC8 [details] [associations]
symbol:ANK1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006888 "ER to Golgi vesicle-mediated
transport" evidence=IMP] [GO:0005622 "intracellular" evidence=IMP]
[GO:0072661 "protein targeting to plasma membrane" evidence=IMP]
[GO:0007165 "signal transduction" evidence=IEA] InterPro:IPR000488
Pfam:PF00531 InterPro:IPR002110 Pfam:PF00023 PRINTS:PR01415
PROSITE:PS50017 PROSITE:PS50088 SMART:SM00005 SMART:SM00248
GO:GO:0007165 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0005622 GO:GO:0006888
Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986 OMA:CRIITTD
GO:GO:0072661 InterPro:IPR000906 Pfam:PF00791 SMART:SM00218
PROSITE:PS51145 GeneTree:ENSGT00700000104348 EMBL:AAEX03010380
Ensembl:ENSCAFT00000009199 Uniprot:F1PRC8
Length = 1916
Score = 138 (53.6 bits), Expect = 9.2e-05, Sum P(4) = 9.2e-05
Identities = 45/166 (27%), Positives = 75/166 (45%)
Query: 275 FGAVANGSCTDKKVGPPLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKT 334
+G AN PL LA Q G +++ +LL + G + LH L
Sbjct: 628 YGGSANAESVQGVT--PLHLAAQEGHAEMVALLLSKQANGNLGNKS---GLTPLH--LVA 680
Query: 335 SMGLSQHILQNRIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINL 394
G H+ + +L+KHG V ++G T LH+A+ GN + ++ L++ + D +N
Sbjct: 681 QEG---HV---PVADVLIKHGVTVDATTRMGYTPLHVASHYGNIKLVKFLLQHQAD-VNA 733
Query: 395 KTIMMETPLFFAVKNDHMVCAEVLLRWGANSEVLNLRRERPIDFAK 440
KT +PL A + H +LL+ GA+ ++ P+ AK
Sbjct: 734 KTKQGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSNGTTPLAIAK 779
Score = 68 (29.0 bits), Expect = 9.2e-05, Sum P(4) = 9.2e-05
Identities = 20/67 (29%), Positives = 37/67 (55%)
Query: 61 LRVSCIFDSVSCATSLVNGDLGPVALVNEVEESSGMTALHLAAESHTARCVELLLKKRAR 120
L ++ +++++ A L+N A VN ++ G+T LH+A+ V LLL + A+
Sbjct: 214 LHIAAHYENLNVAQLLLNRG----ASVNFTPQN-GITPLHIASRRGNVIMVRLLLDRGAQ 268
Query: 121 TDIRSKD 127
+ R+KD
Sbjct: 269 IETRTKD 275
Score = 64 (27.6 bits), Expect = 0.00022, Sum P(4) = 0.00022
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 94 SGMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
+G T LH+A + + R +ELLLK A D ++ G
Sbjct: 374 NGFTPLHIACKKNHIRVMELLLKTGASIDAVTESG 408
Score = 62 (26.9 bits), Expect = 0.00034, Sum P(4) = 0.00034
Identities = 18/68 (26%), Positives = 29/68 (42%)
Query: 61 LRVSCIFDSVSCATSLVNGDLGPVALVNEVEESSGMTALHLAAESHTARCVELLLKKRAR 120
L ++ D A L+ D P +V +G T LH+AA +LLL + A
Sbjct: 181 LHIAARNDDTRTAAVLLQNDPNP-----DVLSKTGFTPLHIAAHYENLNVAQLLLNRGAS 235
Query: 121 TDIRSKDG 128
+ ++G
Sbjct: 236 VNFTPQNG 243
Score = 61 (26.5 bits), Expect = 0.00043, Sum P(4) = 0.00043
Identities = 14/44 (31%), Positives = 25/44 (56%)
Query: 85 ALVNEVEESSGMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
A VN + G T L++AA+ + V+ LL+ A ++ ++DG
Sbjct: 106 ANVN-AQSQKGFTPLYMAAQENHLEVVKFLLENGANQNVATEDG 148
Score = 60 (26.2 bits), Expect = 0.00053, Sum P(4) = 0.00053
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 95 GMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
G T LH+AA+ R ELLL + A + K+G
Sbjct: 540 GFTPLHVAAKYGKVRVAELLLGRDAHPNAAGKNG 573
Score = 60 (26.2 bits), Expect = 0.00053, Sum P(4) = 0.00053
Identities = 11/34 (32%), Positives = 20/34 (58%)
Query: 89 EVEESSGMTALHLAAESHTARCVELLLKKRARTD 122
+ + +G++ +H+AA+ CV LLL+ A D
Sbjct: 303 QAKTKNGLSPIHMAAQGDHLDCVRLLLQYNAEID 336
Score = 59 (25.8 bits), Expect = 0.00066, Sum P(4) = 0.00066
Identities = 19/58 (32%), Positives = 28/58 (48%)
Query: 73 ATSLVNGDLGPVA-LVNEVEESS-GMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
A +L G VA L+N + + ALH+AA + R +LL+ D+ SK G
Sbjct: 153 AVALQQGHENVVAHLINYGTKGKVRLPALHIAARNDDTRTAAVLLQNDPNPDVLSKTG 210
Score = 40 (19.1 bits), Expect = 9.2e-05, Sum P(4) = 9.2e-05
Identities = 16/58 (27%), Positives = 26/58 (44%)
Query: 462 NQEKQNASLESDEDISGTCEALLSMVDDNSNTERICSGTKIEVCKYYESHSGCIRGSK 519
++E + AS E DED S + + DN + T V ++ G +RGS+
Sbjct: 885 SEEPEQASKEYDED-SLIPSSPATETSDNISPVASPVHTGFLVSFMVDARGGSMRGSR 941
Score = 38 (18.4 bits), Expect = 9.2e-05, Sum P(4) = 9.2e-05
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 608 AVQARFVTIMGKEVEIKSAVPKEVLFAEL 636
A F T++ KE+ + K V+FA++
Sbjct: 1231 AEAVNFATLLYKELTAVPYMAKFVIFAKM 1259
>UNIPROTKB|Q5ZKJ1 [details] [associations]
symbol:BARD1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0031436 "BRCA1-BARD1 complex" evidence=IEA] [GO:0042325
"regulation of phosphorylation" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0043065 "positive
regulation of apoptotic process" evidence=IEA] [GO:0043066
"negative regulation of apoptotic process" evidence=IEA]
[GO:0046826 "negative regulation of protein export from nucleus"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0070531 "BRCA1-A complex" evidence=IEA]
[GO:0085020 "protein K6-linked ubiquitination" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR002110
Pfam:PF00023 PRINTS:PR01415 PROSITE:PS50088 PROSITE:PS50089
SMART:SM00184 SMART:SM00248 InterPro:IPR001357 Pfam:PF00097
Pfam:PF00533 Prosite:PS00518 GO:GO:0005737 GO:GO:0043066
GO:GO:0042325 GO:GO:0046872 eggNOG:COG0666 GO:GO:0008270
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003723 GO:GO:0043065 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 SMART:SM00292 SUPFAM:SSF52113
PROSITE:PS50172 GeneTree:ENSGT00550000074487 InterPro:IPR017907
GO:GO:0070531 GO:GO:0031436 CTD:580 HOGENOM:HOG000237306
HOVERGEN:HBG050662 KO:K10683 OMA:KKNSIKM OrthoDB:EOG4FFD1B
GO:GO:0046826 GO:GO:0085020 EMBL:AADN02034496 EMBL:AJ720093
IPI:IPI00651430 RefSeq:NP_001026417.1 UniGene:Gga.22527 SMR:Q5ZKJ1
STRING:Q5ZKJ1 Ensembl:ENSGALT00000005512 GeneID:424010
KEGG:gga:424010 InParanoid:Q5ZKJ1 NextBio:20826397 Uniprot:Q5ZKJ1
Length = 750
Score = 144 (55.7 bits), Expect = 9.4e-05, Sum P(3) = 9.4e-05
Identities = 33/98 (33%), Positives = 58/98 (59%)
Query: 351 LLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLKTIMMETPLFFAVKND 410
LLK+GA + ++ G T LH A G+ + +E L++ + +N ++PL A KN
Sbjct: 422 LLKNGADPNVKDNAGWTPLHEACNHGHQEVVELLLQHKA-LVNSTGYQNDSPLHDAAKNG 480
Query: 411 HMVCAEVLLRWGANSEVLNLRRERPIDFAKSQDMRFLL 448
H+ E+LL GA+ + +N+ RP+D+A+S+ M+ +L
Sbjct: 481 HVSIVELLLLHGASRDAVNIFGLRPVDYAESEKMKSVL 518
Score = 41 (19.5 bits), Expect = 9.4e-05, Sum P(3) = 9.4e-05
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 698 KSWAGRLLYGQPKTSSNESQAYLVESFEEKS 728
K+ G++L QPK S+ +Q ++ +S
Sbjct: 670 KAGGGQILVRQPKPDSDVTQTINTVAYHAES 700
Score = 40 (19.1 bits), Expect = 9.4e-05, Sum P(3) = 9.4e-05
Identities = 9/35 (25%), Positives = 20/35 (57%)
Query: 229 CVIREALAL-GRATKLQRAVKRNSTPTTSQSAEKR 262
C ++ ++ +A L+R +++ P TSQ+ +R
Sbjct: 275 CAAEKSPSIESKAMHLKRGREQSKLPGTSQTKRRR 309
>TAIR|locus:2063804 [details] [associations]
symbol:AT2G03430 "AT2G03430" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0005618
"cell wall" evidence=IDA] [GO:0000724 "double-strand break repair
via homologous recombination" evidence=RCA] [GO:0006259 "DNA
metabolic process" evidence=RCA] [GO:0007059 "chromosome
segregation" evidence=RCA] [GO:0007062 "sister chromatid cohesion"
evidence=RCA] [GO:0007126 "meiosis" evidence=RCA] [GO:0007129
"synapsis" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0007140 "male meiosis"
evidence=RCA] [GO:0010332 "response to gamma radiation"
evidence=RCA] [GO:0016444 "somatic cell DNA recombination"
evidence=RCA] [GO:0032204 "regulation of telomere maintenance"
evidence=RCA] [GO:0032504 "multicellular organism reproduction"
evidence=RCA] [GO:0033044 "regulation of chromosome organization"
evidence=RCA] [GO:0042023 "DNA endoreduplication" evidence=RCA]
[GO:0042138 "meiotic DNA double-strand break formation"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043247 "telomere maintenance
in response to DNA damage" evidence=RCA] [GO:0043248 "proteasome
assembly" evidence=RCA] [GO:0045132 "meiotic chromosome
segregation" evidence=RCA] [GO:0051510 "regulation of
unidimensional cell growth" evidence=RCA] [GO:0051788 "response to
misfolded protein" evidence=RCA] InterPro:IPR002110 Pfam:PF00023
PRINTS:PR01415 PROSITE:PS50088 SMART:SM00248 GO:GO:0005618
EMBL:CP002685 eggNOG:COG0666 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0000502
KO:K06694 HSSP:O75832 UniGene:At.41394 UniGene:At.41396
EMBL:BT005259 EMBL:AK117252 IPI:IPI00528377 RefSeq:NP_178442.2
ProteinModelPortal:Q8GZ22 SMR:Q8GZ22 IntAct:Q8GZ22 STRING:Q8GZ22
PaxDb:Q8GZ22 PRIDE:Q8GZ22 EnsemblPlants:AT2G03430.1 GeneID:814872
KEGG:ath:AT2G03430 TAIR:At2g03430 InParanoid:Q8GZ22 OMA:YDRANIL
PhylomeDB:Q8GZ22 ProtClustDB:CLSN2690635 Genevestigator:Q8GZ22
Uniprot:Q8GZ22
Length = 240
Score = 116 (45.9 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 43/137 (31%), Positives = 65/137 (47%)
Query: 291 PLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKTSMGLSQHILQNRIVGI 350
PL A G+ +++E+LL G +ALH A S G + I +
Sbjct: 86 PLHSAASIGNAELVEVLL---TRGADVNAKNNGGRTALHYA--ASKGRLE------IAQL 134
Query: 351 LLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLKTIMMETPLFFAVKND 410
LL HGA ++ +K+G T LH AA G + E LI + + I+ M +T L +V D
Sbjct: 135 LLTHGAKINITDKVGCTPLHRAASVGKLEVCEFLIEEGAE-IDATDKMGQTALMHSVICD 193
Query: 411 HMVCAEVLLRWGANSEV 427
A +L+R GA+ +V
Sbjct: 194 DKQVAFLLIRHGADVDV 210
Score = 50 (22.7 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 14/34 (41%), Positives = 20/34 (58%)
Query: 95 GMTALHLAAESHTARCVELLLKK-RARTDIRSKD 127
G + LH+AA ++ V+LL A+T I SKD
Sbjct: 47 GRSLLHVAASFGHSQIVKLLSSSDEAKTVINSKD 80
>UNIPROTKB|F8W1S7 [details] [associations]
symbol:HNRNPA1 "Heterogeneous nuclear ribonucleoprotein A1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0045111
"intermediate filament cytoskeleton" evidence=IDA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005737 GO:GO:0005730 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0045111 InterPro:IPR021662
Pfam:PF11627 EMBL:AC078778 HGNC:HGNC:5031 ChiTaRS:HNRNPA1
IPI:IPI01021812 ProteinModelPortal:F8W1S7 SMR:F8W1S7 PRIDE:F8W1S7
Ensembl:ENST00000552591 ArrayExpress:F8W1S7 Bgee:F8W1S7
Uniprot:F8W1S7
Length = 330
Score = 127 (49.8 bits), Expect = 9.4e-05, P = 9.4e-05
Identities = 33/82 (40%), Positives = 47/82 (57%)
Query: 549 KIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKHEKSAAAA 608
K+F+GGL F +SL +FE+ +G + D V K+S RGFGFVT+ + AA
Sbjct: 15 KLFIGGLSFETTDESLRSHFEQ-WGTLTDCVVMRDPNTKRS--RGFGFVTYATVEEVDAA 71
Query: 609 VQARFVTIMGKEVEIKSAVPKE 630
+ AR + G+ VE K AV +E
Sbjct: 72 MNARPHKVDGRVVEPKRAVSRE 93
>ZFIN|ZDB-GENE-050208-655 [details] [associations]
symbol:ankrd29 "ankyrin repeat domain 29"
species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR002110
PRINTS:PR01415 PROSITE:PS50088 SMART:SM00248
ZFIN:ZDB-GENE-050208-655 eggNOG:COG0666 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
EMBL:BX465190 EMBL:BX957240 EMBL:BC095639 IPI:IPI00510886
RefSeq:NP_001018596.1 UniGene:Dr.45559 ProteinModelPortal:Q502M6
Ensembl:ENSDART00000009360 GeneID:553798 KEGG:dre:553798 CTD:147463
GeneTree:ENSGT00680000099683 HOGENOM:HOG000158359
HOVERGEN:HBG080846 InParanoid:Q502M6 OMA:ELIMQGA OrthoDB:EOG4PC9SQ
NextBio:20880516 Bgee:Q502M6 Uniprot:Q502M6
Length = 298
Score = 109 (43.4 bits), Expect = 9.5e-05, Sum P(2) = 9.5e-05
Identities = 47/158 (29%), Positives = 70/158 (44%)
Query: 292 LILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKTSMGLSQHILQNRIVGIL 351
L LA+Q G ++I LL S G + L A + MG S+ +V +L
Sbjct: 146 LFLASQEGHVNLIRQLLSS---GAKVNQPREDGTAPLWMAAQ--MGHSE------VVKVL 194
Query: 352 LKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLKTIMMETPLFFAVKNDH 411
L GA K G TAL AA G+ +E+L++ P LK T L AV
Sbjct: 195 LLRGADRDADRKDGSTALFKAAHKGHCSVMEELLKFSPSLGILKN--GSTALHAAVMGGS 252
Query: 412 MVCAEVLLRWGANSEVLNLRRERPIDFAKSQDMRFLLK 449
+ ++LL+ A+ + N E P D KS+ + +L+
Sbjct: 253 LKAVDLLLKANADPALPNTNNELPRDLTKSERILRVLR 290
Score = 62 (26.9 bits), Expect = 9.5e-05, Sum P(2) = 9.5e-05
Identities = 22/80 (27%), Positives = 37/80 (46%)
Query: 49 NADQQTAIVTKLLRVSCIFDSVSCATSLVNGDLGPVALVNEVEESSGMTALHLAAESHTA 108
+ D + A T L V+ C L+ A +N ++ +G TAL A++
Sbjct: 35 DVDCKDAYGTTALMVASYSGHYECVRELIMQG----ADIN-LQRETGSTALFFASQQGHN 89
Query: 109 RCVELLLKKRARTDIRSKDG 128
V+LL + A T+ ++KDG
Sbjct: 90 EIVKLLFEFGASTEFQTKDG 109
>ZFIN|ZDB-GENE-060312-43 [details] [associations]
symbol:rbm24b "RNA binding motif protein 24b"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0001947 "heart
looping" evidence=IMP] [GO:0072358 "cardiovascular system
development" evidence=IGI] [GO:0003228 "atrial cardiac muscle
tissue development" evidence=IMP] [GO:0003229 "ventricular cardiac
muscle tissue development" evidence=IMP] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
ZFIN:ZDB-GENE-060312-43 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 GO:GO:0001947 GO:GO:0003229
GeneTree:ENSGT00390000002308 GO:GO:0003228 EMBL:CT027645
IPI:IPI00898048 ProteinModelPortal:E9QCG4
Ensembl:ENSDART00000127556 Bgee:E9QCG4 Uniprot:E9QCG4
Length = 245
Score = 124 (48.7 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 35/90 (38%), Positives = 51/90 (56%)
Query: 539 IHASTQEFK-SKIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQS-VSRGFGF 596
+H+S ++ +KIFVGGLP+ SL YFE FG IE+A V T++Q+ SRG+GF
Sbjct: 1 MHSSQKDTTYTKIFVGGLPYHTTDSSLRKYFEV-FGEIEEAVVI---TDRQTGKSRGYGF 56
Query: 597 VTFKHEKSAAAAVQARFVTIMGKEVEIKSA 626
VT +A A + I G++ + A
Sbjct: 57 VTMADRSAAERACKDPNPIIDGRKANVNLA 86
>RGD|1311629 [details] [associations]
symbol:Dapk1 "death associated protein kinase 1" species:10116
"Rattus norvegicus" [GO:0004672 "protein kinase activity"
evidence=ISO] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] [GO:0005516 "calmodulin binding"
evidence=IEA;ISO] [GO:0005524 "ATP binding" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0006468 "protein
phosphorylation" evidence=ISO] [GO:0006915 "apoptotic process"
evidence=IEA;ISO] [GO:0006917 "induction of apoptosis"
evidence=IEA;ISO] [GO:0007243 "intracellular protein kinase
cascade" evidence=IEA;ISO] [GO:0015629 "actin cytoskeleton"
evidence=IEA;ISO] [GO:0017148 "negative regulation of translation"
evidence=ISO] [GO:0042802 "identical protein binding" evidence=ISO]
[GO:0043065 "positive regulation of apoptotic process"
evidence=ISO] [GO:0043066 "negative regulation of apoptotic
process" evidence=IEA;ISO] [GO:0071346 "cellular response to
interferon-gamma" evidence=ISO] [GO:0097190 "apoptotic signaling
pathway" evidence=ISO] [GO:2000310 "regulation of
N-methyl-D-aspartate selective glutamate receptor activity"
evidence=IEA;ISO] InterPro:IPR000488 Pfam:PF00531
InterPro:IPR002110 InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PRINTS:PR01415 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 PROSITE:PS50017 PROSITE:PS50088 SMART:SM00005
SMART:SM00220 SMART:SM00248 RGD:1311629 GO:GO:0005524 GO:GO:0005737
GO:GO:0006915 GO:GO:0006917 GO:GO:0015629 SUPFAM:SSF56112
GO:GO:0004674 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0007243 Gene3D:1.10.533.10
InterPro:IPR011029 SUPFAM:SSF47986 GO:GO:2000310 CTD:1612 KO:K08803
InterPro:IPR020676 InterPro:IPR020675 PANTHER:PTHR22964
PANTHER:PTHR22964:SF1 GeneTree:ENSGT00680000099521 IPI:IPI00947960
RefSeq:NP_001100805.2 UniGene:Rn.23108 Ensembl:ENSRNOT00000066950
GeneID:306722 KEGG:rno:306722 UCSC:RGD:1311629 NextBio:656433
ArrayExpress:F1LNN8 Uniprot:F1LNN8
Length = 1430
Score = 136 (52.9 bits), Expect = 9.7e-05, Sum P(3) = 9.7e-05
Identities = 72/333 (21%), Positives = 123/333 (36%)
Query: 149 PDEYSVEDLVVILGQKNLTTVKLLSQKTKELDEVAYANXXXXXXXXXXXXXXXXXDKVNE 208
P+++ L++ G N+ ++LL ++ +D V +NE
Sbjct: 375 PNKHGTPPLLIAAGCGNIQMLQLLIKRGSRID-VQDKGGSNAIYWASRHGHVDTLKFLNE 433
Query: 209 SILVLHDSDLGAKEKTTIYECVIREALALGRATKLQRAVKRNSTPTTSQSAEKRKXXXXX 268
+ L K+K+ E + A G A +Q S P E+
Sbjct: 434 N-----KCPLDVKDKSG--ETALHVAARYGHADVVQLLCSFGSNPDFQDKEEETPLHCAA 486
Query: 269 XXXXXXFG-AVANGSCT----DKKVGPPLILATQAGDEDVIEILLKSKXXXXXXXXXXXX 323
A+ C +++ PL+ A+ G D++E L +
Sbjct: 487 WHGYYSVARALCEVGCNVNIKNREGETPLLTASARGYHDIVECLAEH---GADLNASDKD 543
Query: 324 GNSALHCALKTSMGLSQHILQNRIVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALED 383
G+ ALH A++ Q ++ LL HG +V Q++ G T LH+A G++ +
Sbjct: 544 GHIALHLAVRRC--------QMEVIKTLLGHGCLVDFQDRHGNTPLHVACKDGSAPIVVA 595
Query: 384 LIRKEPDC-INLKTIMMETPLFFAVKNDHMVCAEVLLRWGANSEVLNLRRERPIDFAKSQ 442
L E C +++ TPL A N + L GAN E L L + D AK++
Sbjct: 596 LC--EASCNLDISNKYGRTPLHLAANNGILDVVRYLCLMGANVEALTLDGKTAEDLAKAE 653
Query: 443 DMR----FLLKAANTCHTNLAFLNQEKQNASLE 471
L + H L F+ Q + +L+
Sbjct: 654 QHEHVAGLLARLRKDTHRGL-FIQQLRPTQNLQ 685
Score = 62 (26.9 bits), Expect = 9.7e-05, Sum P(3) = 9.7e-05
Identities = 23/86 (26%), Positives = 42/86 (48%)
Query: 43 IDNSLDNADQQTAIVTKLLRVSCIFDSVSCATSLVNGDLGPVALVNEVEESSGMTALHLA 102
+ S D D++ + V K + + D+V L+ G L VN+ + G L +A
Sbjct: 330 VARSDDTLDEEDSFVMKAIIHAINDDNVPGLQHLL-GSLSSYD-VNQPNKH-GTPPLLIA 386
Query: 103 AESHTARCVELLLKKRARTDIRSKDG 128
A + ++LL+K+ +R D++ K G
Sbjct: 387 AGCGNIQMLQLLIKRGSRIDVQDKGG 412
Score = 37 (18.1 bits), Expect = 9.7e-05, Sum P(3) = 9.7e-05
Identities = 11/27 (40%), Positives = 14/27 (51%)
Query: 446 FLLKAANTCHTNLAFLNQEKQNASLES 472
FLLKA++ NL QE +S S
Sbjct: 1391 FLLKASSVFKINLDGNGQEAYASSCNS 1417
>UNIPROTKB|F1N2S1 [details] [associations]
symbol:ASB2 "Ankyrin repeat and SOCS box protein 2"
species:9913 "Bos taurus" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] InterPro:IPR002110 InterPro:IPR001496 Pfam:PF07525
PRINTS:PR01415 PROSITE:PS50088 PROSITE:PS50225 SMART:SM00248
SMART:SM00969 UniPathway:UPA00143 GO:GO:0035556 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
GO:GO:0016567 GO:GO:0005622 GeneTree:ENSGT00530000063050
IPI:IPI00696829 UniGene:Bt.44353 OMA:FLMDLGC EMBL:DAAA02053047
Ensembl:ENSBTAT00000038558 Uniprot:F1N2S1
Length = 633
Score = 131 (51.2 bits), Expect = 0.00010, P = 0.00010
Identities = 31/86 (36%), Positives = 46/86 (53%)
Query: 351 LLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLKTIMMETPLFFAVKND 410
++K G +S+ NK G LH AA G L+ L R P I+ +T+ ET L+ A
Sbjct: 122 MIKAGKNLSEPNKEGWLPLHEAAYYGQLNCLKALHRAYPAVIDQRTLQEETALYLATCRG 181
Query: 411 HMVCAEVLLRWGANSEVLNLRRERPI 436
H+ C + LL+ GA ++ N RE P+
Sbjct: 182 HVDCLQFLLQAGAEPDISNKSRETPL 207
>UNIPROTKB|Q3SX45 [details] [associations]
symbol:ASB2 "Ankyrin repeat and SOCS box protein 2"
species:9913 "Bos taurus" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] InterPro:IPR002110 InterPro:IPR001496 Pfam:PF00023
Pfam:PF07525 PRINTS:PR01415 PROSITE:PS50088 PROSITE:PS50225
SMART:SM00248 SMART:SM00969 UniPathway:UPA00143 GO:GO:0035556
eggNOG:COG0666 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0016567 GO:GO:0005622
PROSITE:PS50330 HOGENOM:HOG000034086 EMBL:BC104497 IPI:IPI00696829
RefSeq:NP_001029841.1 UniGene:Bt.44353 ProteinModelPortal:Q3SX45
PRIDE:Q3SX45 GeneID:539244 KEGG:bta:539244 CTD:51676
HOVERGEN:HBG104037 InParanoid:Q3SX45 KO:K10324 OrthoDB:EOG4BK540
NextBio:20877873 Uniprot:Q3SX45
Length = 633
Score = 131 (51.2 bits), Expect = 0.00010, P = 0.00010
Identities = 31/86 (36%), Positives = 46/86 (53%)
Query: 351 LLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLKTIMMETPLFFAVKND 410
++K G +S+ NK G LH AA G L+ L R P I+ +T+ ET L+ A
Sbjct: 122 MIKAGKNLSEPNKEGWLPLHEAAYYGQLNCLKALHRAYPAVIDQRTLQEETALYLATCRG 181
Query: 411 HMVCAEVLLRWGANSEVLNLRRERPI 436
H+ C + LL+ GA ++ N RE P+
Sbjct: 182 HVDCLQFLLQAGAEPDISNKSRETPL 207
>MGI|MGI:1929749 [details] [associations]
symbol:Asb3 "ankyrin repeat and SOCS box-containing 3"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0035556
"intracellular signal transduction" evidence=IEA]
InterPro:IPR002110 InterPro:IPR001496 Pfam:PF07525 PRINTS:PR01415
PROSITE:PS50088 PROSITE:PS50225 SMART:SM00248 SMART:SM00969
UniPathway:UPA00143 MGI:MGI:1929749 GO:GO:0035556 eggNOG:COG0666
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00530000063050 CTD:51130 HOGENOM:HOG000022587
HOVERGEN:HBG024356 KO:K10325 OrthoDB:EOG4NVZK3 OMA:HLAYCLK
ChiTaRS:ASB3 EMBL:AF155354 EMBL:AK143580 EMBL:AL646095
EMBL:AL662891 EMBL:AL732621 IPI:IPI00322970 RefSeq:NP_076395.2
UniGene:Mm.440539 ProteinModelPortal:Q9WV72 SMR:Q9WV72
STRING:Q9WV72 PhosphoSite:Q9WV72 PaxDb:Q9WV72 PRIDE:Q9WV72
Ensembl:ENSMUST00000020551 GeneID:65257 KEGG:mmu:65257
InParanoid:Q5SSV5 NextBio:320352 Bgee:Q9WV72 CleanEx:MM_ASB3
Genevestigator:Q9WV72 Uniprot:Q9WV72
Length = 525
Score = 134 (52.2 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 42/137 (30%), Positives = 69/137 (50%)
Query: 291 PLILATQAGDEDVIEILLKSKXXXXXXXXXXXXGNSALHCALKTSMGLSQHILQNRIVGI 350
PL LA ++G DV+++LL+ G ++LH A + G ++ I +
Sbjct: 115 PLFLAVESGRIDVLKLLLQH--GANVNGSHSMSGWNSLHQA--SFQGNAETIR------L 164
Query: 351 LLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLKTIMMETPLFFAVKND 410
LLK GA Q+ G+T L +AA G +++ LI + +N + + TPLF A +
Sbjct: 165 LLKQGADRECQDDFGITPLFVAAQYGKLESMSILISSGAN-VNCQALDKATPLFIAAQEG 223
Query: 411 HMVCAEVLLRWGANSEV 427
H C E+LL GA+ ++
Sbjct: 224 HTKCVELLLSSGADPDL 240
Score = 43 (20.2 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 7/27 (25%), Positives = 16/27 (59%)
Query: 89 EVEESSGMTALHLAAESHTARCVELLL 115
+V ++ G +H AA + C+++L+
Sbjct: 37 DVADNRGWMPIHEAAYHNAVECLQMLI 63
Score = 43 (20.2 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 14/52 (26%), Positives = 24/52 (46%)
Query: 68 DSVSCATSLVNGDLGPVALVNEVEESSGMTALHLAAESHTARCVELLLKKRA 119
++V C L++ D + + E G ALHLA + ++LL+ A
Sbjct: 54 NAVECLQMLIHTDSSENYIKAKTFE--GFCALHLAVSQGHWKITQILLEAGA 103
Score = 37 (18.1 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 10/36 (27%), Positives = 15/36 (41%)
Query: 93 SSGMTALHLAAESHTARCVELLLKKRARTDIRSKDG 128
S + + LAA + + LLKK D+ G
Sbjct: 8 SDTCSTVGLAAREGNVKILRKLLKKGRSVDVADNRG 43
>UNIPROTKB|Q90X95 [details] [associations]
symbol:bard1 "BRCA1-associated RING domain protein"
species:8355 "Xenopus laevis" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001841 InterPro:IPR002110 Pfam:PF00023
PRINTS:PR01415 PROSITE:PS50088 PROSITE:PS50089 SMART:SM00184
SMART:SM00248 InterPro:IPR001357 Pfam:PF00533 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 Gene3D:3.30.40.10
InterPro:IPR013083 SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172
InterPro:IPR017907 CTD:580 HOVERGEN:HBG050662 KO:K10683 HSSP:Q99728
EMBL:AF416869 RefSeq:NP_001082131.1 UniGene:Xl.12056
ProteinModelPortal:Q90X95 SMR:Q90X95 IntAct:Q90X95 GeneID:398242
KEGG:xla:398242 Xenbase:XB-GENE-492039 Uniprot:Q90X95
Length = 772
Score = 143 (55.4 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 42/173 (24%), Positives = 84/173 (48%)
Query: 343 LQNRIVGI--LLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLKTIMME 400
++ I G+ LL GA + ++ G T LH A G++ ++ L++ +N +
Sbjct: 429 IKGDIQGVEDLLNSGANPNVKDNAGWTPLHEACNLGHTMVVQLLLQHHA-LMNTTGYQND 487
Query: 401 TPLFFAVKNDHMVCAEVLLRWGANSEVLNLRRERPIDFAKSQDMRFLLKAANTCHTNLAF 460
TPL AVKN H+ ++LL GA+ + +N+ +P+D+A++++M+ +L T L
Sbjct: 488 TPLHDAVKNGHIAIVKLLLSHGASRDAVNIFGLQPVDYAETEEMKSVLLETQTERDRLLL 547
Query: 461 ---LNQEKQNASLESDEDISGTCEALLSMVDDNSNTERICSGTKIEVCKYYES 510
L + ++ +E + LL+ ++ ++ K +C Y+S
Sbjct: 548 HPCLAAPQLSSHQRKEEAVVLIASGLLAT--QRADLTKLAKMLKASICAEYDS 598
Score = 38 (18.4 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 698 KSWAGRLLYGQPKTSSNESQ 717
K+ G++L QPK S+ +Q
Sbjct: 692 KAAGGQILIRQPKPDSDVTQ 711
>MGI|MGI:1097717 [details] [associations]
symbol:Ankrd1 "ankyrin repeat domain 1 (cardiac muscle)"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0001085 "RNA polymerase II transcription factor binding"
evidence=ISO] [GO:0001105 "RNA polymerase II transcription
coactivator activity" evidence=ISO] [GO:0002039 "p53 binding"
evidence=ISO] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003714
"transcription corepressor activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005667 "transcription factor complex"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISO;IDA] [GO:0005829
"cytosol" evidence=ISO] [GO:0006357 "regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0008134
"transcription factor binding" evidence=ISO] [GO:0010976 "positive
regulation of neuron projection development" evidence=ISO]
[GO:0030016 "myofibril" evidence=IDA] [GO:0031432 "titin binding"
evidence=ISO;IPI] [GO:0031674 "I band" evidence=ISO;IDA]
[GO:0035690 "cellular response to drug" evidence=IDA] [GO:0035914
"skeletal muscle cell differentiation" evidence=IMP] [GO:0035994
"response to muscle stretch" evidence=ISO] [GO:0042826 "histone
deacetylase binding" evidence=ISO] [GO:0043065 "positive regulation
of apoptotic process" evidence=ISO] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=ISO] [GO:0044444 "cytoplasmic part"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0050714
"positive regulation of protein secretion" evidence=ISO]
[GO:0055008 "cardiac muscle tissue morphogenesis" evidence=ISO]
[GO:0070412 "R-SMAD binding" evidence=ISO] [GO:0071222 "cellular
response to lipopolysaccharide" evidence=ISO;IDA] [GO:0071260
"cellular response to mechanical stimulus" evidence=ISO]
[GO:0071347 "cellular response to interleukin-1" evidence=ISO]
[GO:0071356 "cellular response to tumor necrosis factor"
evidence=ISO] [GO:0071560 "cellular response to transforming growth
factor beta stimulus" evidence=ISO] [GO:2000279 "negative
regulation of DNA biosynthetic process" evidence=ISO]
InterPro:IPR002110 PROSITE:PS50088 SMART:SM00248 MGI:MGI:1097717
GO:GO:0005829 GO:GO:0003714 GO:GO:0071560 GO:GO:0003677
eggNOG:COG0666 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0050714 GO:GO:0006357
GO:GO:0071222 GO:GO:0005667 GO:GO:0043065 GO:GO:0035690
GO:GO:0031674 GO:GO:0055008 GO:GO:2000279 GO:GO:0071260 CTD:27063
GeneTree:ENSGT00560000077131 HOGENOM:HOG000236321
HOVERGEN:HBG071561 OMA:EGDTPMH OrthoDB:EOG4VDPZW GO:GO:0001105
GO:GO:0071347 GO:GO:0071356 GO:GO:0043517 GO:GO:0035994
EMBL:AF041847 EMBL:AK009655 EMBL:AK009959 EMBL:AK145944
EMBL:AK146471 EMBL:AK146627 EMBL:AK146940 EMBL:BC037138
EMBL:AF041849 IPI:IPI00453998 RefSeq:NP_038496.2 UniGene:Mm.10279
ProteinModelPortal:Q9CR42 SMR:Q9CR42 STRING:Q9CR42
PhosphoSite:Q9CR42 PRIDE:Q9CR42 Ensembl:ENSMUST00000025718
GeneID:107765 KEGG:mmu:107765 UCSC:uc008hhh.1 InParanoid:Q9CR42
NextBio:359408 Bgee:Q9CR42 CleanEx:MM_ANKRD1 Genevestigator:Q9CR42
GermOnline:ENSMUSG00000024803 GO:GO:0035914 Uniprot:Q9CR42
Length = 319
Score = 126 (49.4 bits), Expect = 0.00011, P = 0.00011
Identities = 32/91 (35%), Positives = 53/91 (58%)
Query: 347 IVGILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLKTIMMETPLFFA 406
++ +LL GA +S ++KL TALH+A +G+ + E LI E D +N K +TPL A
Sbjct: 201 VLKLLLNKGAKISARDKLLSTALHVAVRTGHYECAEHLIACEAD-LNAKDREGDTPLHDA 259
Query: 407 VKNDHMVCAEVLLRWGANSEVLNLRRERPID 437
V+ + +L+ +GA+ +V N + P+D
Sbjct: 260 VRLNRYKMIRLLMTFGADLKVKNCAGKTPMD 290
>ZFIN|ZDB-GENE-030912-14 [details] [associations]
symbol:hnrnpa1 "heterogeneous nuclear
ribonucleoprotein A1" species:7955 "Danio rerio" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 ZFIN:ZDB-GENE-030912-14 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0030529 eggNOG:COG0724
HSSP:P09651 HOVERGEN:HBG002295 HOGENOM:HOG000234442 KO:K12741
OrthoDB:EOG4HQDKF CTD:3178 EMBL:BC044442 IPI:IPI00500189
RefSeq:NP_956398.1 UniGene:Dr.67768 ProteinModelPortal:Q803K3
SMR:Q803K3 STRING:Q803K3 PRIDE:Q803K3 GeneID:378453 KEGG:dre:378453
InParanoid:Q803K3 NextBio:20813776 ArrayExpress:Q803K3 Bgee:Q803K3
Uniprot:Q803K3
Length = 422
Score = 128 (50.1 bits), Expect = 0.00012, P = 0.00012
Identities = 33/82 (40%), Positives = 47/82 (57%)
Query: 549 KIFVGGLPFFLDSDSLGGYFEKHFGPIEDARVAEFQTEKQSVSRGFGFVTFKHEKSAAAA 608
K+F+GGL F DSL +FE+ +G + D V + K+S RGFGFVT+ A+
Sbjct: 34 KLFIGGLSFETTDDSLRAHFEQ-WGTLTDCVVMKDPNTKRS--RGFGFVTYSSVDEVNAS 90
Query: 609 VQARFVTIMGKEVEIKSAVPKE 630
+ AR + G+ VE K AV +E
Sbjct: 91 MDARPHKVDGRLVEPKRAVSRE 112
>WB|WBGene00007801 [details] [associations]
symbol:trpa-1 species:6239 "Caenorhabditis elegans"
[GO:0005216 "ion channel activity" evidence=IEA] [GO:0006811 "ion
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] InterPro:IPR002110
InterPro:IPR005821 Pfam:PF00023 Pfam:PF00520 PROSITE:PS50088
SMART:SM00248 GO:GO:0016021 GO:GO:0009792 eggNOG:COG0666
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0000003 GO:GO:0050896 GO:GO:0005216
GeneTree:ENSGT00690000102150 EMBL:Z72504 PIR:T19552
RefSeq:NP_502249.3 ProteinModelPortal:Q18297 SMR:Q18297
PaxDb:Q18297 PRIDE:Q18297 EnsemblMetazoa:C29E6.2 GeneID:178118
KEGG:cel:CELE_C29E6.2 UCSC:C29E6.2 CTD:178118 WormBase:C29E6.2
HOGENOM:HOG000017923 InParanoid:Q18297 KO:K04984 OMA:DEEANTA
NextBio:899788 ArrayExpress:Q18297 Uniprot:Q18297
Length = 1211
Score = 114 (45.2 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 30/90 (33%), Positives = 48/90 (53%)
Query: 350 ILLKHGAIVSQQNKLGLTALHIAAGSGNSQALEDLIRKEPDCINLKTIMMETPLFFAVKN 409
+L KHGA ++Q N+ TALH AA G + A+ L+ + + +K M + L A ++
Sbjct: 492 LLQKHGASITQVNEDEETALHRAAIGGQTGAVRQLLEWDIRLLLMKDEMGNSALHLAARS 551
Query: 410 DHMVCAEVLLRWGANSEVLNLRRERPIDFA 439
H +VLL GA+ E N ++ P+ A
Sbjct: 552 GHDATTKVLLDNGADKEAKNSYQKTPLQVA 581
Score = 72 (30.4 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 25/106 (23%), Positives = 52/106 (49%)
Query: 29 DDKKQLIN-VSKRHFID--NSL----DNADQQTAIVTKLLRVSCIFDSVSCATSLVNGDL 81
D +K+LI+ +++ F++ +L N ++ + L V+ + + + L+ +
Sbjct: 310 DREKELIHFAAEKGFLEVLKALVEAGGNKNELNEVKAVPLHVAAQMNQLEVVSYLIEEEK 369
Query: 82 GPVALVNEVEESSGMTALHLAAESHTARCVELLLKKRARTDIRSKD 127
+ +V+E G+T L +A + +CVE L+ K+A I KD
Sbjct: 370 DNIDVVDE----QGLTPLMMAVTHDSKKCVEYLIAKKANLTITDKD 411
WARNING: HSPs involving 152 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.130 0.377 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1044 951 0.00094 122 3 11 22 0.42 34
38 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 402
No. of states in DFA: 626 (67 KB)
Total size of DFA: 453 KB (2214 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:02
No. of threads or processors used: 24
Search cpu time: 88.49u 0.09s 88.58t Elapsed: 00:00:16
Total cpu time: 88.54u 0.10s 88.64t Elapsed: 00:00:19
Start: Tue May 21 09:01:21 2013 End: Tue May 21 09:01:40 2013
WARNINGS ISSUED: 2