Your job contains 1 sequence.
>001615
MSPRFLGATKSIFSRSKYLLVVAAPITRPRVLSTSSVSFPLKTAKPPVMSYRPNYQGGQR
RGGGGPSTSGRGGRRGGRGGGGGRGGGGGGRGEQRWWDPVWRAERLRQQAAEMEVFDQNE
WWGKLEQMKRGEEQEMIIKRKFSRADQQTLADMAHQLGLHFHAYNKGKALAVSKVPLPMY
RPDLDERHGSTEKELQMSIETERRVGNLLNSSQGNVPVNDSGIESSEVARRPKLSVKVAN
TISPPQSDSAKERLNVILKERQEKLKSSDSGKAMLSFREKLPAFKMKAEFLKAVAENQVL
VVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQPRRISAISVAARVSSERGENLGE
TVGYQIRLESKRSAQTRLLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFLLII
LRDLLPRRPDLRLILMSATINADLFSKYFGNAPTVHIPGLTFPVTDLFLEDVLEKTRYKM
NSKLDSFQGNSRRSRRQDSKKDHLTALFEDVDIDSNYKNYRASTRASLEAWSAEQIDLGL
VESTIEYICRHEGDGAILVFLTGWNDISKLLDQIKVNKFLGDPNKFLVLPLHGSMPTINQ
REIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISK
ASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQLPEILRTPLQELCLHIKSLQLGTVGS
FLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGKMLLMGAIFQ
CLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAKRNR
RERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYSHDLEMVCAILC
AGLYPNVVQCKRKGKRAVFYTKEVGQVALHPSSVNANQNNFPLPYMVYSEMVKTNNINVY
DSTNISEYALLLFGGNLIPSKTGEGIEMLGGYLHFSASKTVLELIRKLRGELDKLLNRKI
EDPRVDLSVEGKAVVSAVVELLHG
The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 001615
(1044 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2039280 - symbol:AT2G35920 species:3702 "Arabi... 3650 0. 1
TAIR|locus:504954904 - symbol:ABO6 "ABA overly sensitive ... 2158 1.5e-223 1
TAIR|locus:2008144 - symbol:AT1G48650 species:3702 "Arabi... 2138 2.0e-221 1
TAIR|locus:2038796 - symbol:AT2G01130 species:3702 "Arabi... 2014 2.8e-208 1
UNIPROTKB|Q9H2U1 - symbol:DHX36 "Probable ATP-dependent R... 1670 8.0e-172 1
MGI|MGI:1919412 - symbol:Dhx36 "DEAH (Asp-Glu-Ala-His) bo... 1665 2.7e-171 1
UNIPROTKB|Q05B79 - symbol:DHX36 "Uncharacterized protein"... 1662 5.6e-171 1
UNIPROTKB|F6V8H1 - symbol:DHX36 "Uncharacterized protein"... 1661 7.2e-171 1
RGD|1308767 - symbol:Dhx36 "DEAH (Asp-Glu-Ala-His) box po... 1658 1.5e-170 1
UNIPROTKB|E1C550 - symbol:DHX36 "Uncharacterized protein"... 1612 1.1e-165 1
UNIPROTKB|F5GZS0 - symbol:DHX36 "Probable ATP-dependent R... 1575 9.3e-162 1
UNIPROTKB|E2QTL7 - symbol:DHX36 "Uncharacterized protein"... 1570 3.1e-161 1
UNIPROTKB|E7EWK3 - symbol:DHX36 "Probable ATP-dependent R... 1530 5.5e-157 1
ZFIN|ZDB-GENE-030131-4078 - symbol:dhx57 "DEAH (Asp-Glu-A... 760 1.7e-153 4
UNIPROTKB|E2QX71 - symbol:DHX57 "Uncharacterized protein"... 729 7.7e-145 3
TAIR|locus:2196265 - symbol:AT1G58060 species:3702 "Arabi... 796 4.8e-144 3
UNIPROTKB|F1N1A2 - symbol:DHX57 "Uncharacterized protein"... 725 2.4e-143 3
UNIPROTKB|Q6P158 - symbol:DHX57 "Putative ATP-dependent R... 728 1.7e-142 3
UNIPROTKB|F1M8G5 - symbol:Dhx57 "Protein Dhx57" species:1... 721 1.4e-141 3
UNIPROTKB|F1LSC4 - symbol:Dhx57 "Protein Dhx57" species:1... 721 2.1e-141 3
MGI|MGI:2147067 - symbol:Dhx57 "DEAH (Asp-Glu-Ala-Asp/His... 719 1.1e-140 3
ZFIN|ZDB-GENE-050419-20 - symbol:si:dkey-119o24.1 "si:dke... 1369 6.3e-140 1
UNIPROTKB|E1C9G0 - symbol:DHX57 "Uncharacterized protein"... 704 1.3e-139 4
FB|FBgn0032883 - symbol:CG9323 species:7227 "Drosophila m... 1341 5.8e-137 1
TAIR|locus:2196255 - symbol:AT1G58050 species:3702 "Arabi... 1155 2.8e-135 2
UNIPROTKB|Q9H6S0 - symbol:YTHDC2 "Probable ATP-dependent ... 855 1.6e-131 3
UNIPROTKB|F1NS70 - symbol:YTHDC2 "Uncharacterized protein... 833 1.9e-131 3
MGI|MGI:2448561 - symbol:Ythdc2 "YTH domain containing 2"... 861 2.8e-131 3
UNIPROTKB|J9P6V4 - symbol:DHX29 "Uncharacterized protein"... 865 3.3e-131 3
UNIPROTKB|F1SLN0 - symbol:DHX29 "Uncharacterized protein"... 842 4.5e-130 3
UNIPROTKB|I3LQ47 - symbol:DHX29 "Uncharacterized protein"... 842 4.6e-130 3
UNIPROTKB|E2QZR7 - symbol:YTHDC2 "Uncharacterized protein... 857 7.3e-130 2
DICTYBASE|DDB_G0267516 - symbol:dhx57 "RWD domain-contain... 1095 8.2e-130 3
UNIPROTKB|I3LG95 - symbol:DHX29 "Uncharacterized protein"... 835 2.9e-129 3
UNIPROTKB|J9PAM3 - symbol:YTHDC2 "Uncharacterized protein... 841 2.1e-128 2
TAIR|locus:2052841 - symbol:HVT1 "helicase in vascular ti... 839 3.3e-128 2
FB|FBgn0030246 - symbol:CG1582 species:7227 "Drosophila m... 711 2.0e-127 3
UNIPROTKB|F1MNU7 - symbol:YTHDC2 "Uncharacterized protein... 846 4.3e-127 2
UNIPROTKB|Q08211 - symbol:DHX9 "ATP-dependent RNA helicas... 1200 5.1e-122 1
UNIPROTKB|Q5R874 - symbol:DHX9 "ATP-dependent RNA helicas... 1200 5.1e-122 1
UNIPROTKB|Q68FK8 - symbol:dhx9 "ATP-dependent RNA helicas... 1199 6.5e-122 1
TAIR|locus:2009200 - symbol:NIH "nuclear DEIH-boxhelicase... 798 1.4e-121 3
UNIPROTKB|G5E5N3 - symbol:DHX9 "ATP-dependent RNA helicas... 1195 1.7e-121 1
UNIPROTKB|Q28141 - symbol:DHX9 "ATP-dependent RNA helicas... 1195 1.7e-121 1
RGD|1308548 - symbol:Dhx9 "DEAH (Asp-Glu-Ala-His) box pol... 1195 1.7e-121 1
UNIPROTKB|E2RNT3 - symbol:DHX9 "Uncharacterized protein" ... 1188 9.5e-121 1
MGI|MGI:108177 - symbol:Dhx9 "DEAH (Asp-Glu-Ala-His) box ... 1182 4.1e-120 1
FB|FBgn0002774 - symbol:mle "maleless" species:7227 "Dros... 1179 8.5e-120 1
RGD|2318361 - symbol:Dhx29 "DEAH (Asp-Glu-Ala-His) box po... 1138 1.5e-119 2
ZFIN|ZDB-GENE-070912-171 - symbol:dhx9 "DEAH (Asp-Glu-Ala... 1174 2.9e-119 1
UNIPROTKB|F1P1F4 - symbol:DHX30 "Putative ATP-dependent R... 791 3.9e-119 2
UNIPROTKB|Q5ZI74 - symbol:DHX30 "Putative ATP-dependent R... 791 4.9e-119 2
MGI|MGI:2145374 - symbol:Dhx29 "DEAH (Asp-Glu-Ala-His) bo... 1127 1.4e-118 2
RGD|1308888 - symbol:Dhx30 "DEAH (Asp-Glu-Ala-His) box po... 778 7.0e-118 2
UNIPROTKB|Q5BJS0 - symbol:Dhx30 "Putative ATP-dependent R... 778 7.0e-118 2
UNIPROTKB|J9P3P6 - symbol:DHX30 "Uncharacterized protein"... 771 7.7e-118 2
MGI|MGI:1920081 - symbol:Dhx30 "DEAH (Asp-Glu-Ala-His) bo... 778 9.6e-118 2
UNIPROTKB|D4A1V3 - symbol:Dhx30 "Putative ATP-dependent R... 778 1.0e-117 2
UNIPROTKB|F1N0J0 - symbol:DHX30 "Putative ATP-dependent R... 771 2.3e-117 2
UNIPROTKB|J9P264 - symbol:DHX30 "Uncharacterized protein"... 771 2.9e-117 2
UNIPROTKB|E2RL62 - symbol:DHX30 "Uncharacterized protein"... 771 3.0e-117 2
UNIPROTKB|H7BXY3 - symbol:DHX30 "Putative ATP-dependent R... 772 4.6e-117 2
UNIPROTKB|F1SLI4 - symbol:DHX30 "Uncharacterized protein"... 774 4.6e-117 2
UNIPROTKB|Q2NKY8 - symbol:DHX30 "Putative ATP-dependent R... 771 6.0e-117 2
UNIPROTKB|Q7L2E3 - symbol:DHX30 "Putative ATP-dependent R... 772 7.0e-117 2
UNIPROTKB|E2RID8 - symbol:DHX29 "Uncharacterized protein"... 1103 1.4e-116 2
UNIPROTKB|Q5R607 - symbol:DHX30 "Putative ATP-dependent R... 763 3.5e-116 2
UNIPROTKB|E1B9N7 - symbol:DHX29 "Uncharacterized protein"... 1098 1.6e-115 2
UNIPROTKB|I3LHZ6 - symbol:DHX9 "Uncharacterized protein" ... 1130 1.3e-114 1
UNIPROTKB|Q7Z478 - symbol:DHX29 "ATP-dependent RNA helica... 1096 1.8e-114 2
UNIPROTKB|G4MR96 - symbol:MGG_04709 "Uncharacterized prot... 1024 6.4e-112 2
UNIPROTKB|E1C388 - symbol:DHX29 "Uncharacterized protein"... 1103 9.7e-112 1
DICTYBASE|DDB_G0275313 - symbol:dhx9 "ATP-dependent RNA h... 591 7.8e-108 3
WB|WBGene00004355 - symbol:rha-1 species:6239 "Caenorhabd... 1064 1.3e-107 1
UNIPROTKB|G4MZR9 - symbol:MGG_07059 "Pre-mRNA-splicing fa... 630 2.6e-105 3
UNIPROTKB|F1RLG0 - symbol:YTHDC2 "Uncharacterized protein... 847 1.9e-104 2
UNIPROTKB|H7C109 - symbol:DHX57 "Putative ATP-dependent R... 872 1.2e-100 2
ASPGD|ASPL0000008624 - symbol:AN5839 species:162425 "Emer... 985 9.3e-99 1
POMBASE|SPBC15C4.05 - symbol:SPBC15C4.05 "ATP-dependent R... 910 1.4e-98 2
CGD|CAL0005664 - symbol:orf19.6818 species:5476 "Candida ... 631 8.1e-98 4
UNIPROTKB|Q5ADM3 - symbol:CaO19.14110 "Putative uncharact... 631 8.1e-98 4
UNIPROTKB|E1BJ90 - symbol:DHX34 "Uncharacterized protein"... 631 1.0e-94 4
UNIPROTKB|Q14147 - symbol:DHX34 "Probable ATP-dependent R... 634 1.3e-94 4
UNIPROTKB|I3LCY3 - symbol:DHX36 "Uncharacterized protein"... 921 2.6e-94 2
UNIPROTKB|E2RTK4 - symbol:DHX34 "Uncharacterized protein"... 636 4.1e-94 3
UNIPROTKB|E2RTK2 - symbol:DHX34 "Uncharacterized protein"... 636 6.0e-94 3
POMBASE|SPCC895.09c - symbol:ucp12 "ATP-dependent RNA hel... 565 2.1e-93 3
MGI|MGI:1918973 - symbol:Dhx34 "DEAH (Asp-Glu-Ala-His) bo... 610 3.1e-91 3
UNIPROTKB|F1RLY9 - symbol:DHX34 "Uncharacterized protein"... 586 5.1e-88 3
ZFIN|ZDB-GENE-061207-30 - symbol:dhx34 "DEAH (Asp-Glu-Ala... 579 2.6e-87 4
ASPGD|ASPL0000059403 - symbol:AN0133 species:162425 "Emer... 575 8.6e-87 2
DICTYBASE|DDB_G0285213 - symbol:dhx15 "putative RNA splic... 566 2.0e-86 2
SGD|S000004411 - symbol:YLR419W "Putative helicase with l... 526 4.1e-86 4
TAIR|locus:2065210 - symbol:AT2G47250 species:3702 "Arabi... 582 1.1e-85 2
WB|WBGene00009922 - symbol:F52B5.3 species:6239 "Caenorha... 393 5.4e-85 3
TAIR|locus:2095989 - symbol:AT3G62310 species:3702 "Arabi... 579 1.7e-84 2
POMBASE|SPBC16H5.10c - symbol:prp43 "ATP-dependent RNA he... 538 7.9e-84 2
UNIPROTKB|J3KR71 - symbol:DHX34 "Probable ATP-dependent R... 494 1.7e-82 3
CGD|CAL0000153 - symbol:orf19.1687 species:5476 "Candida ... 547 1.8e-82 2
SGD|S000003088 - symbol:PRP43 "RNA helicase in the DEAH-b... 531 9.5e-82 2
WARNING: Descriptions of 215 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2039280 [details] [associations]
symbol:AT2G35920 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0006499
"N-terminal protein myristoylation" evidence=RCA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CP002685 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K14442 OMA:RIRNRSY IPI:IPI00520060
RefSeq:NP_850255.1 UniGene:At.27892 ProteinModelPortal:F4ILR7
SMR:F4ILR7 PRIDE:F4ILR7 EnsemblPlants:AT2G35920.1 GeneID:818165
KEGG:ath:AT2G35920 Uniprot:F4ILR7
Length = 995
Score = 3650 (1289.9 bits), Expect = 0., P = 0.
Identities = 699/955 (73%), Positives = 815/955 (85%)
Query: 93 EQRWWDPVWRAERLRQQAAEMEVFDQNEWWGKLEQMKRGEEQEMIIKRKFSRADQQTLAD 152
EQRWWDPVWRAERLRQQ AEMEV D+NEWW K+EQ K G EQEM+IKR FSR DQQTL+D
Sbjct: 39 EQRWWDPVWRAERLRQQQAEMEVLDENEWWNKIEQWKTGGEQEMLIKRNFSRGDQQTLSD 98
Query: 153 MAHQLGLHFHAYNKGKALAVSKVPLPMYRPDLDERHGSTEKELQMSIETERRVGNLLNSS 212
MA Q+GL+FHAYNKGKAL VSKVPLP YR DLDERHGST+KE++MS ETER++G+LL ++
Sbjct: 99 MALQMGLYFHAYNKGKALVVSKVPLPDYRADLDERHGSTQKEIKMSTETERKLGSLLKTT 158
Query: 213 Q--GNVPVNDSGIESSEVARRPKLSVKVANTISPPQSDSAKERLNVILKERQEKLKSSDS 270
Q G+ + S + R L +K ++ S KE+ + LKERQEKLK+++S
Sbjct: 159 QESGSSGASASAFNDQQ-DRTSTLGLKRPDSASKLPDSLEKEKFSFALKERQEKLKATES 217
Query: 271 GKAMLSFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGAD 330
KA+ +FREKLPAFKMK EFL +V++NQVLVVSGETGCGKTTQLPQFILEEE+SSLRGAD
Sbjct: 218 VKALKAFREKLPAFKMKEEFLNSVSQNQVLVVSGETGCGKTTQLPQFILEEEISSLRGAD 277
Query: 331 CNIICTQPXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQL 390
CNIICTQP ERGE++GE+VGYQIRLESKRS QTRLLFCTTGVLLR+L
Sbjct: 278 CNIICTQPRRISAISVASRISAERGESIGESVGYQIRLESKRSDQTRLLFCTTGVLLRRL 337
Query: 391 VEDPDLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYFG 450
+EDP+L+ VSHLLVDEIHERGMNEDF MSATINAD+FS YFG
Sbjct: 338 IEDPNLTNVSHLLVDEIHERGMNEDFLLIILRDLLPRRPDLRLILMSATINADMFSTYFG 397
Query: 451 NAPTVHIPGLTFPVTDLFLEDVLEKTRYKMNSKLDS--FQGNXXXXXXQ-DSKKDHLTAL 507
N+PT+HIPG TFPV +LFLEDVLEK+RY + S DS +QG+ + +SKKD LT L
Sbjct: 398 NSPTMHIPGFTFPVAELFLEDVLEKSRYNIKSS-DSGNYQGSSRGRRRESESKKDDLTTL 456
Query: 508 FEDVDIDSNYKNYRASTRASLEAWSAEQIDLGLVESTIEYICRHEGDGAILVFLTGWNDI 567
FED+DI+S+YK+Y ++TR SLEAWS QID+ LVE+TIE+ICR EG GAILVFLTGW++I
Sbjct: 457 FEDIDINSHYKSYSSATRNSLEAWSGAQIDVDLVEATIEHICRLEGGGAILVFLTGWDEI 516
Query: 568 SKLLDQIKVNKFLGDPNKFLVLPLHGSMPTINQREIFDRPPPNKRKIVLATNIAESSITI 627
SKLL++I +N FLGD +KFLVLPLHGSMPT+NQREIFDRPPPNKRKIVLATNIAESSITI
Sbjct: 517 SKLLEKINMNNFLGDSSKFLVLPLHGSMPTVNQREIFDRPPPNKRKIVLATNIAESSITI 576
Query: 628 DDVVYVVDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIH 687
DDVVYVVDCGKAKETSYDALNK+ACLLPSWISKASAHQRRGRAGRVQ GVCY+LYP++I+
Sbjct: 577 DDVVYVVDCGKAKETSYDALNKVACLLPSWISKASAHQRRGRAGRVQAGVCYRLYPKVIY 636
Query: 688 DAMLPYQLPEILRTPLQELCLHIKSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGAL 747
DA YQLPEI+RTPLQELCLHIKSLQ+G++GSFL+KALQPPD LAV+NAIELLKTIGAL
Sbjct: 637 DAFPQYQLPEIIRTPLQELCLHIKSLQVGSIGSFLAKALQPPDALAVENAIELLKTIGAL 696
Query: 748 DDMENLTPLGRHLCTLPVDPNIGKMLLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKE 807
+D+E LTPLGRHLCTLPVDPNIGKMLL+GAIFQC+NPALTIAAALA+R+PFVLP+N ++E
Sbjct: 697 NDVEELTPLGRHLCTLPVDPNIGKMLLIGAIFQCVNPALTIAAALAYRSPFVLPLNRKEE 756
Query: 808 VDEAKRSFAGDSCSDHIALLKAFDGYKDAKRNRRERDFCWENFLSPITLQMMEDMRSQFL 867
DEAKR FAGDSCSDHIALLKA++GY+DAKR E+DFCW+NFLSP+TL+MMEDMR+QFL
Sbjct: 757 ADEAKRYFAGDSCSDHIALLKAYEGYRDAKRGGNEKDFCWQNFLSPVTLRMMEDMRNQFL 816
Query: 868 DLLSDIGFVDKSKGPSAYNRYSHDLEMVCAILCAGLYPNVVQCKRKGKRAVFYTKEVGQV 927
DLLSDIGFVDKSK P+AYN+YS+D+EM+ A+LCAGLYPNVVQCKR+GKR FYTKE+G+V
Sbjct: 817 DLLSDIGFVDKSK-PNAYNQYSYDMEMISAVLCAGLYPNVVQCKRRGKRTAFYTKELGKV 875
Query: 928 ALHPSSVNANQNNFPLPYMVYSEMVKTNNINVYDSTNISEYALLLFGGNLIPSKTGEGIE 987
+HP SVNA N F LPY+VYSE VKT ++ + DSTNIS+YALL+FGGNLIPSKTGEGIE
Sbjct: 876 DIHPGSVNARVNLFSLPYLVYSEKVKTTSVYIRDSTNISDYALLMFGGNLIPSKTGEGIE 935
Query: 988 MLGGYLHFSASKTVLELIRKLRGELDKLLNRKIEDPRVDLSVEGKAVVSAVVELL 1042
MLGGYLHFSASK +LELI++LRGE+DKLLN+KIEDP +D++VEGK VVSAVVELL
Sbjct: 936 MLGGYLHFSASKNILELIQRLRGEVDKLLNKKIEDPSLDITVEGKGVVSAVVELL 990
>TAIR|locus:504954904 [details] [associations]
symbol:ABO6 "ABA overly sensitive 6" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA;ISS] [GO:0003725 "double-stranded RNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA;ISS]
[GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00358
SMART:SM00490 SMART:SM00847 InterPro:IPR014720 GO:GO:0005524
EMBL:CP002688 GenomeReviews:BA000015_GR Gene3D:3.30.160.20
GO:GO:0005622 GO:GO:0003725 EMBL:AB005245 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 EMBL:AB008271 HOGENOM:HOG000247063
KO:K14442 EMBL:AB025625 IPI:IPI00533344 RefSeq:NP_680142.2
UniGene:At.45659 ProteinModelPortal:Q9FF84 SMR:Q9FF84 PaxDb:Q9FF84
PRIDE:Q9FF84 EnsemblPlants:AT5G04895.1 GeneID:830371
KEGG:ath:AT5G04895 TAIR:At5g04895 InParanoid:Q9FF84 OMA:MRAGHSP
PhylomeDB:Q9FF84 ProtClustDB:CLSN2680421 Genevestigator:Q9FF84
Uniprot:Q9FF84
Length = 1161
Score = 2158 (764.7 bits), Expect = 1.5e-223, P = 1.5e-223
Identities = 454/966 (46%), Positives = 619/966 (64%)
Query: 94 QRWWDPVWRAERLRQQAAEMEVFDQNEWWGKLEQMKRGE-EQEMIIKRKFSRADQQTLAD 152
+++ D + E + A V + +EW KL + + EQE++ + K R D + +++
Sbjct: 71 EQFSDDEYECE-FEEHKASSSVANVDEWKWKLGILLANDSEQEIVSRDKRDRRDYEQISN 129
Query: 153 MAHQLGLHFHAYNKGKALAVSKVPLPMYRPDLDERHGSTEKELQMSIETERRVGNLLNSS 212
+A ++GL+ Y GK + SKVPLP YRPDLD++ E L +S++ RRV LL
Sbjct: 130 LAKRMGLYSEIY--GKVVVASKVPLPNYRPDLDDKRPQREVVLPLSLQ--RRVEGLLQEH 185
Query: 213 QGNVPVNDSGIESSEVA--RRPKLSVKVANTISPPQSDSAK-----ERLNVILKERQEKL 265
+ ++ SG + VA + PK + ++ + S D + +R ++ ++ Q
Sbjct: 186 LDSQQLS-SGKANECVADSQPPKQTEELPDENSDSFLDGSVMEKVLQRRSMRMRNMQRTW 244
Query: 266 KSSDSGKAMLSFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSS 325
+ S G+ ML FR+ LP+FK K L+A+A NQV+VVSGETGCGKTTQLPQ+ILE E+ S
Sbjct: 245 QESPEGRTMLEFRKTLPSFKDKERLLQAIARNQVIVVSGETGCGKTTQLPQYILESEIES 304
Query: 326 LRGADCNIICTQPXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLLFCTTGV 385
RGA CNIICTQP ERGE LGETVG+++RLE R T LLFCT+G+
Sbjct: 305 GRGAFCNIICTQPRRISAMAVSERVSAERGEPLGETVGFKVRLEGMRGKNTHLLFCTSGI 364
Query: 386 LLRQLVEDPDLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINADLF 445
LLR+L+ D +L+ V+H+ VDEIHERGMNEDF MSAT+NA+LF
Sbjct: 365 LLRRLLSDRNLNGVTHVFVDEIHERGMNEDFLIIVLKELLPRRPDLRLVLMSATLNAELF 424
Query: 446 SKYFGNAPTVHIPGLTFPVTDLFLEDVLEKTRYKMNS--KLDSFQGNXXXXXXQDS---- 499
S Y+G APT+HIPG T PV FLEDVLE T YK+ S ++D + G Q
Sbjct: 425 SNYYGGAPTIHIPGFTHPVKAHFLEDVLEITGYKLTSFNQVDDY-GQEKTWKTQKQLMPR 483
Query: 500 -KKDHLTALFEDVDIDSNYKNYRASTRASLEAWSAEQIDLGLVESTIEYICRHEGDGAIL 558
+K+ +T L E+ SN+++Y + TR SL +W + I L+E+ + +ICR E GA+L
Sbjct: 484 KRKNQITTLVEEALSKSNFESYNSRTRDSLSSWMPDCIGFNLIEAVLCHICRKERPGAVL 543
Query: 559 VFLTGWNDISKLLDQIKVNKFLGDPNKFLVLPLHGSMPTINQREIFDRPPPNKRKIVLAT 618
VFLTGW+DI L DQIK + LGDPN+ L+L HGSM T QR IF+R PPN RKIVLAT
Sbjct: 544 VFLTGWDDIRSLSDQIKAHPLLGDPNRVLLLMCHGSMATAEQRLIFERAPPNIRKIVLAT 603
Query: 619 NIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPGVC 678
N+AE+SITI+DVV+VVDCGKAKET+YDALN CLLPSWIS+ASA QRRGRAGR+ PG C
Sbjct: 604 NMAEASITINDVVFVVDCGKAKETTYDALNNTPCLLPSWISQASARQRRGRAGRLFPGEC 663
Query: 679 YKLYPRIIHDAMLPYQLPEILRTPLQELCLHIKSLQLGTVGSFLSKALQPPDPLAVQNAI 738
Y LYP+ ++DA YQLPE+LRTPL LCL IKSLQ+ ++ FLS ALQ P+ LAVQNAI
Sbjct: 664 YHLYPKCVYDAFAEYQLPELLRTPLNSLCLQIKSLQVESIAEFLSAALQAPESLAVQNAI 723
Query: 739 ELLKTIGALDDMENLTPLGRHLCTLPVDPNIGKMLLMGAIFQCLNPALTIAAALAHRNPF 798
LK IGALD+ ENLT LG+ L LPVDP +GKML+MGAIF+C +P LTI + L+ R+PF
Sbjct: 724 GFLKMIGALDEKENLTDLGKLLSILPVDPKLGKMLIMGAIFRCFDPILTIVSGLSVRDPF 783
Query: 799 VLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAKRNRRERDFCWENFLSPITLQM 858
+LP + + AK F+ SDH+AL++AF+G+KDA+R +FCW NFLS TLQ
Sbjct: 784 LLPQDKKDLALSAKLRFSAKDYSDHMALVRAFEGWKDAEREGSAYEFCWRNFLSAQTLQA 843
Query: 859 MEDMRSQFLDLLSDIGFVDKSKGPSAYNRYSHDLEMVCAILCAGLYPNVVQCKRKGKRAV 918
+ +R QF +L + G V + N+ SH+ +V A++C+GL+P + +
Sbjct: 844 IHSLRKQFNYILKEAGLVHDDLALN--NKLSHNQSLVRAVICSGLFPGIASVVHRETSMS 901
Query: 919 FYTKEVGQVALHPSSVNANQNNFPLPYMVYSEMVKTNNINVYDSTNISEYALLLFGGNLI 978
F T + GQV+L+ +SVN+ P P++V+ E VK N + + DST + + +L+LFGG+L
Sbjct: 902 FKTMDDGQVSLYANSVNSRFPTIPYPWLVFGEKVKVNAVLIRDSTGVPDSSLILFGGSLS 961
Query: 979 PSKTGEGIEMLGGYLHFSASKTVLELIRKLRGELDKLLNRKIEDPRVDLSVEGKAVVSAV 1038
++ML GY+ F + E KL+ ELDKLL +K+EDP +D+ EGK ++ AV
Sbjct: 962 TGVQVGHLKMLDGYIDFFMDPNLAESYVKLKEELDKLLQKKLEDPSMDIHKEGKYLMLAV 1021
Query: 1039 VELLHG 1044
EL+ G
Sbjct: 1022 QELVAG 1027
>TAIR|locus:2008144 [details] [associations]
symbol:AT1G48650 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
EMBL:CP002684 GO:GO:0005524 Gene3D:3.30.160.20 GO:GO:0005622
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K14442
IPI:IPI00938568 RefSeq:NP_001154411.1 UniGene:At.22775
ProteinModelPortal:F4HYJ6 SMR:F4HYJ6 PRIDE:F4HYJ6
EnsemblPlants:AT1G48650.2 GeneID:841287 KEGG:ath:AT1G48650
OMA:GRIAYND Uniprot:F4HYJ6
Length = 1206
Score = 2138 (757.7 bits), Expect = 2.0e-221, P = 2.0e-221
Identities = 436/943 (46%), Positives = 607/943 (64%)
Query: 108 QQAAEMEVFDQNEWWGKLEQMKRG-EEQEMIIKRKFSRADQQTLADMAHQLGLHFHAYNK 166
QQ A + + ++W KL + R E+QE++ + + R D ++ +A ++GLH Y+K
Sbjct: 124 QQMAGSTLDNIDQWRFKLTMLLRNKEDQEVVSRERKDRRDFDHISALATRMGLHSRQYSK 183
Query: 167 GKALAVSKVPLPMYRPDLDERHGSTEKELQMSIETE--RRVGNLLNSSQGNVPVNDSGIE 224
+ +SK PLP YRPDLD++ E L +++E + + L+ + +P
Sbjct: 184 --IVVISKAPLPNYRPDLDDKRPQREVVLPFGLQSEVDAHLHSFLDQKKTLIPEMPRQ-N 240
Query: 225 SSEVARRPKLSVKVANTISPPQSDSAKERL----NVILKERQEKLKSSDSGKAMLSFREK 280
SSE + + T+ Q+ A+ER+ ++ LK +Q++ S G+ M+ FR+
Sbjct: 241 SSESLANGYGNYETPETVM--QNSLARERILRPRSLQLKSKQQQWVDSPEGQKMVGFRKT 298
Query: 281 LPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQPXX 340
LPA+K K LKA+A NQV+VVSGETGCGKTTQLPQ+ILE E+ + RGA C+IICTQP
Sbjct: 299 LPAYKEKDALLKAIAANQVVVVSGETGCGKTTQLPQYILESEIEAARGATCSIICTQPRR 358
Query: 341 XXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVEDPDLSCVS 400
ERGE +GE+VGY++RLE R TRLLFCTTGVLLR+L+ D L V+
Sbjct: 359 ISAISVSERVAAERGEQIGESVGYKVRLEGMRGRDTRLLFCTTGVLLRRLLVDRSLKGVT 418
Query: 401 HLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGNAPTVHIPGL 460
H++VDEIHERGMNEDF MSAT+NA+LFS YFG AP +HIPG
Sbjct: 419 HVVVDEIHERGMNEDFLLIVLKDLLPRRPDLKLILMSATLNAELFSSYFGGAPAMHIPGF 478
Query: 461 TFPVTDLFLEDVLEKTRYKMNS--KLDSFQGNXXXXXXQDS-----KKDHLTALFEDVDI 513
T+PV FLED LE + Y++ + ++D + G Q +K +++ ED
Sbjct: 479 TYPVRAHFLEDYLETSGYRLTTYNQIDDY-GEEKTWKMQKQAQFKKRKSLISSAVEDALE 537
Query: 514 DSNYKNYRASTRASLEAWSAEQIDLGLVESTIEYICRHEGDGAILVFLTGWNDISKLLDQ 573
+++K Y TR SL WS + I L+E+ + +I + E GA+LVF+TGW+DI+ L +Q
Sbjct: 538 AADFKGYNFRTRDSLSCWSPDSIGFNLIENVLCHIVKGERPGAVLVFMTGWDDINSLKNQ 597
Query: 574 IKVNKFLGDPNKFLVLPLHGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYV 633
++ + LGDPNK L+L HGSM + QR IFDRPP RKIVLATN+AE+SITI+DVVYV
Sbjct: 598 LEAHSLLGDPNKVLLLACHGSMASSEQRLIFDRPPEGIRKIVLATNMAETSITINDVVYV 657
Query: 634 VDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPY 693
+DCGKAKETSYDALN CLLPSWISKA+A QRRGRAGRV PG CY LYPR +++A Y
Sbjct: 658 IDCGKAKETSYDALNNTPCLLPSWISKAAARQRRGRAGRVMPGECYHLYPRCVYEAFADY 717
Query: 694 QLPEILRTPLQELCLHIKSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENL 753
Q PE+LRTPLQ LCL IKSL LG++ FLS+ALQPP+ L+VQNA+E LK IGALDD ENL
Sbjct: 718 QQPELLRTPLQSLCLQIKSLGLGSISEFLSRALQPPEALSVQNAVEYLKIIGALDDDENL 777
Query: 754 TPLGRHLCTLPVDPNIGKMLLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKR 813
TPLG++L LPV+P +GKML++GAIF CL+P +T+ A L+ R+PF++P + + + A+
Sbjct: 778 TPLGKNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAETARS 837
Query: 814 SFAGDSCSDHIALLKAFDGYKDAKRNRRERDFCWENFLSPITLQMMEDMRSQFLDLLSDI 873
F+G SDH+ L++A++G+KDA+R D+CW+NFLS TL+ M+ MR QF +LL +
Sbjct: 838 KFSGRDYSDHLTLVRAYNGWKDAERTHSGYDYCWKNFLSSQTLKAMDSMRKQFFNLLKEA 897
Query: 874 GFVDKSKGPSAYNRYSHDLEMVCAILCAGLYPNVVQCKRKGKRAVFYTKEVGQVALHPSS 933
+D +G S + SHD +V AI+CAG++P V K K T E GQV L+ SS
Sbjct: 898 SLIDNIEGCS---KLSHDEHLVRAIICAGMFPGVCSVVNKEKSITLKTMEDGQVLLYSSS 954
Query: 934 VNANQNNFPLPYMVYSEMVKTNNINVYDSTNISEYALLLFGGNLIPSKTGEGIEMLGGYL 993
VN N P P++V+++ VK N++ + DST +S+ LLLFG + ++MLGGYL
Sbjct: 955 VNGNVPMIPFPWLVFNDKVKVNSVFLRDSTAVSDSVLLLFGDKISSGGFDGHLKMLGGYL 1014
Query: 994 HFSASKTVLELIRKLRGELDKLLNRKIEDPRVDLSVEGKAVVS 1036
F T+ L+ ELD+L+ K+ +P++D+ + K + +
Sbjct: 1015 EFFMKPTLAYTYLSLKRELDELIQNKLVNPKLDIQLYDKLMTA 1057
>TAIR|locus:2038796 [details] [associations]
symbol:AT2G01130 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00358
SMART:SM00490 SMART:SM00847 InterPro:IPR014720 GO:GO:0005524
EMBL:CP002685 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K14442 IPI:IPI00528464
RefSeq:NP_178223.2 UniGene:At.42514 ProteinModelPortal:F4IM84
SMR:F4IM84 PRIDE:F4IM84 EnsemblPlants:AT2G01130.1 GeneID:814642
KEGG:ath:AT2G01130 OMA:PSWISKV Uniprot:F4IM84
Length = 1113
Score = 2014 (714.0 bits), Expect = 2.8e-208, P = 2.8e-208
Identities = 416/945 (44%), Positives = 591/945 (62%)
Query: 103 AERLRQQAAEMEVFDQNEWWGKLEQM-KRGEEQEMIIKRKFSRADQQTLADMAHQLGLHF 161
+E + Q D ++W + + K +QE+I + K R D LA +A LGL+
Sbjct: 42 SEDRQPQEGTFHCADLDDWNKRFSMLLKDSLKQEVISREKKDRRDFDKLAALATTLGLYS 101
Query: 162 HAYNKGKALAVSKVPLPMYRPDLDERHGSTEKELQMSIETERRVGNLLNSSQGNVPVNDS 221
HAY K + SK+PLP YR DLD++ ++E+ + + +RV L
Sbjct: 102 HAY--AKVVVFSKIPLPNYRFDLDDK--KPQREVNLHTDLLQRVEAYLTEYLSKSSNRID 157
Query: 222 GIESSEVARRPKLSVKVANTISPPQSDSAKERL---NVILKERQEKLKSSDSGKAMLSFR 278
+ ++ V+R +S P SA + L ++ L++RQ+ ++S G+ ML R
Sbjct: 158 RVPANSVSRTSSISSTDEWFSEQPLPISATKILWQRSLQLRDRQQYWQASVEGQRMLDSR 217
Query: 279 EKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQP 338
LPAFK + L A+++NQV+V+SGETGCGKTTQ+PQFILE E+ + RGA +IICTQP
Sbjct: 218 TSLPAFKQRHSVLTAISQNQVIVISGETGCGKTTQIPQFILESEIEANRGAFSSIICTQP 277
Query: 339 XXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVEDPDLSC 398
ERGE LGE+VGY++RLE + TRLLFCTTG+LLR+L+ D +L
Sbjct: 278 RRISAMSVSERVAYERGEQLGESVGYKVRLEGVKGRDTRLLFCTTGILLRRLLVDRNLRG 337
Query: 399 VSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGNAPTVHIP 458
V+H++VDEIHERGMNEDF MSAT++A+LFS YFG A ++IP
Sbjct: 338 VTHVIVDEIHERGMNEDFLLIILKDLLSRRSELKLILMSATLDAELFSSYFGGAGVIYIP 397
Query: 459 GLTFPVTDLFLEDVLEKTRYKMN--SKLDSF-QGNXXXXXXQDSKK--DHLTALFEDVDI 513
G T+PV FLED+LE TRY++ +++D + Q Q KK +T + ED
Sbjct: 398 GFTYPVRSHFLEDILEMTRYRLTPYNQIDDYGQERTWKMNKQIPKKRKSQITFVVEDALR 457
Query: 514 DSNYKNYRASTRASLEAWSAEQIDLGLVESTIEYICRHEGDGAILVFLTGWNDISKLLDQ 573
+++K + TR SL W + I L+E + IC +EG G IL+FLTGW+DIS L ++
Sbjct: 458 AADFKEFSPETRESLSCWYPDCIGFNLIEFLLCNICENEGPGGILIFLTGWDDISSLKEK 517
Query: 574 IKVNKFLGDPNKFLVLPLHGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYV 633
++++ G+P+ ++L HGSM T QR IF+ P RKIVLATNIAE+SITI+DV +V
Sbjct: 518 LQIHPIFGNPDLVMLLACHGSMETFEQRLIFEEPASGVRKIVLATNIAETSITINDVAFV 577
Query: 634 VDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPY 693
+DCGKAKETSYDALN CLLPSWISK SA QRRGRAGRV+PG CY LYP+ ++DA Y
Sbjct: 578 IDCGKAKETSYDALNNTPCLLPSWISKVSAQQRRGRAGRVRPGQCYHLYPKCVYDAFAEY 637
Query: 694 QLPEILRTPLQELCLHIKSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENL 753
QLPEILRTPL LCL IKSL LG++ FLS+ALQ P+ LAVQ AI LK IGALD+ E+L
Sbjct: 638 QLPEILRTPLHSLCLQIKSLNLGSISEFLSRALQSPELLAVQKAIAFLKIIGALDENEDL 697
Query: 754 TPLGRHLCTLPVDPNIGKMLLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKR 813
T LGR+L LP++P +GKML++GAI CL+P LT+AA L+ R+PF+ P + + + AK
Sbjct: 698 TTLGRYLSKLPMEPKLGKMLILGAILGCLDPILTVAAGLSVRDPFLTPQDKKDLAEAAKS 757
Query: 814 SFAGDSCSDHIALLKAFDGYKDAKRNRRERDFCWENFLSPITLQMMEDMRSQFLDLLSDI 873
F+ D SDH+AL++A++G+K A+ D+CW+NFLS +L+ ++ +R +F LL D
Sbjct: 758 QFSRDH-SDHLALVRAYEGWKKAEEESAVYDYCWKNFLSIQSLRAIDSLRKEFFSLLKDT 816
Query: 874 GFVDKSKGPSAYNRYSHDLEMVCAILCAGLYPNVVQCKRKGKRAVFYTKEVGQVALHPSS 933
G +D + PS N +D + A++C G+YP + + T E GQV L+ +S
Sbjct: 817 GLIDGN--PSICNSEGNDANLTRAVICYGMYPGICSVVHNERSFSLKTMEDGQVLLYSNS 874
Query: 934 VNANQNNFPLPYMVYSEMVKTNNINVYDSTNISEYALLLFGGNLIPSKTGEGIEMLGGYL 993
NA + P P++V++E +K N++ + DST S+ L+LFGG++ T ++MLGGYL
Sbjct: 875 ENARETKIPYPWLVFNEKIKVNSVFLRDSTACSDSTLILFGGSISKGDTDGHLKMLGGYL 934
Query: 994 HFSASKTVLELIRKLRGELDKLLNRKIEDPRVDLSVEGKAVVSAV 1038
F V E+ + L+ ELD+L+ K+ +P+VD+ + ++SA+
Sbjct: 935 EFFMKPDVAEIYQTLKKELDELIQNKLLNPKVDMQAH-RELLSAI 978
>UNIPROTKB|Q9H2U1 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:CH471052 GO:GO:0009615 GO:GO:0003725 EMBL:AC018452
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 GO:GO:0043330
HOGENOM:HOG000247063 EMBL:AF217190 EMBL:AJ577133 EMBL:AJ577134
EMBL:AK314435 EMBL:AC134026 EMBL:BC036035 EMBL:AB040921
IPI:IPI00027415 IPI:IPI00217760 IPI:IPI00784170 PIR:D56236
RefSeq:NP_001107869.1 RefSeq:NP_065916.2 UniGene:Hs.446270
ProteinModelPortal:Q9H2U1 SMR:Q9H2U1 IntAct:Q9H2U1
MINT:MINT-3066797 STRING:Q9H2U1 PhosphoSite:Q9H2U1 DMDM:74762733
PaxDb:Q9H2U1 PRIDE:Q9H2U1 DNASU:170506 Ensembl:ENST00000308361
Ensembl:ENST00000329463 Ensembl:ENST00000496811 GeneID:170506
KEGG:hsa:170506 UCSC:uc003ezy.4 UCSC:uc003ezz.4 UCSC:uc010hvq.3
CTD:170506 GeneCards:GC03M153990 HGNC:HGNC:14410 HPA:HPA035399
MIM:612767 neXtProt:NX_Q9H2U1 PharmGKB:PA27223 HOVERGEN:HBG081438
InParanoid:Q9H2U1 KO:K14442 OMA:RIRNRSY OrthoDB:EOG4K6G3J
PhylomeDB:Q9H2U1 GenomeRNAi:170506 NextBio:88959
ArrayExpress:Q9H2U1 Bgee:Q9H2U1 CleanEx:HS_DHX36
Genevestigator:Q9H2U1 GermOnline:ENSG00000174953 Uniprot:Q9H2U1
Length = 1008
Score = 1670 (592.9 bits), Expect = 8.0e-172, P = 8.0e-172
Identities = 352/807 (43%), Positives = 506/807 (62%)
Query: 257 ILKERQEKLKSSDSGKAMLSFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQ 316
+L++ Q+K K+ M FREKLP++ M+ E + + +QV V+SGETGCGKTTQ+ Q
Sbjct: 184 LLEDLQKK-KNDLRYIEMQHFREKLPSYGMQKELVNLIDNHQVTVISGETGCGKTTQVTQ 242
Query: 317 FILEEELSSLRGADCNIICTQPXXXXXXXXXXXXXXERGENLGE--TVGYQIRLESKRSA 374
FIL+ + +G+ C I+CTQP ER E+ G + GYQIRL+S+
Sbjct: 243 FILDNYIERGKGSACRIVCTQPRRISAISVAERVAAERAESCGSGNSTGYQIRLQSRLPR 302
Query: 375 -QTRLLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXX 433
Q +L+CTTG++L+ L DP LS VSH+++DEIHER + D
Sbjct: 303 KQGSILYCTTGIILQWLQSDPYLSSVSHIVLDEIHERNLQSDVLMTVVKDLLNFRSDLKV 362
Query: 434 XXMSATINADLFSKYFGNAPTVHIPGLTFPVTDLFLEDVLEKTRYKMNSK--LDSFQGNX 491
MSAT+NA+ FS+YFGN P +HIPG TFPV + LEDV+EK RY K F+
Sbjct: 363 ILMSATLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDVIEKIRYVPEQKEHRSQFKRGF 422
Query: 492 XXXXXQDSKKDHLTALFED--VD-IDSNYKNYRASTRASLEAWSAEQIDLGLVESTIEYI 548
+K+ A++++ D + + Y AST +E +++DL L+ + I YI
Sbjct: 423 MQGHVNRQEKEEKEAIYKERWPDYVRELRRRYSASTVDVIEMMEDDKVDLNLIVALIRYI 482
Query: 549 CRHEGDGAILVFLTGWNDISKLLDQIKVNKFLGDPNKFLVLPLHGSMPTINQREIFDRPP 608
E DGAILVFL GW++IS L D + +++ + +KFL++PLH MPT+NQ ++F R P
Sbjct: 483 VLEEEDGAILVFLPGWDNISTLHDLL-MSQVMFKSDKFLIIPLHSLMPTVNQTQVFKRTP 541
Query: 609 PNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASAHQRRG 668
P RKIV+ATNIAE+SITIDDVVYV+D GK KET +D N ++ + W+SKA+A QR+G
Sbjct: 542 PGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKG 601
Query: 669 RAGRVQPGVCYKLYPRIIHDAMLPYQLPEILRTPLQELCLHIKSLQLGTVGSFLSKALQP 728
RAGRVQPG CY LY + + YQLPEILRTPL+ELCL IK L+LG + FLS+ + P
Sbjct: 602 RAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYFLSRLMDP 661
Query: 729 PDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGKMLLMGAIFQCLNPALTI 788
P AV +I L + ALD E LTPLG HL LPV+P+IGKM+L GA+F CL+P LTI
Sbjct: 662 PSNEAVLLSIRHLMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTI 721
Query: 789 AAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAKRN--RRERDFC 846
AA+L+ ++PFV+P+ +K D ++ A D+ SDH+ ++ AF+G+++A+R R E+D+C
Sbjct: 722 AASLSFKDPFVIPLGKEKIADARRKELAKDTRSDHLTVVNAFEGWEEARRRGFRYEKDYC 781
Query: 847 WENFLSPITLQMMEDMRSQFLDLLSDIGFVDKS--KGPSAYNRYSHDLEMVCAILCAGLY 904
WE FLS TLQM+ +M+ QF + L GFV K P + N S + +++ A++CAGLY
Sbjct: 782 WEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPKDPES-NINSDNEKIIKAVICAGLY 840
Query: 905 PNVVQCK----RKGKRAVFYTKEVGQVALHPSSVNANQNNFPLPYMVYSEMVKTNNINVY 960
P V + + +K K YTK G VA+HP SVN Q +F +++Y ++T++I +Y
Sbjct: 841 PKVAKIRLNLGKKRKMVKVYTKTDGLVAVHPKSVNVEQTDFHYNWLIYHLKMRTSSIYLY 900
Query: 961 DSTNISEYALLLFGGNLIPSKTGEGIEM-LGGYLHFSASKTVLELIRKLRGELDKLLNRK 1019
D T +S Y LL FGG++ K + + + ++ F + + L+++LR ELD LL K
Sbjct: 901 DCTEVSPYCLLFFGGDISIQKDNDQETIAVDEWIVFQSPARIAHLVKELRKELDILLQEK 960
Query: 1020 IEDPR-VDLS-VEGK--AVVSAVVELL 1042
IE P VD + + + AV+SA+++L+
Sbjct: 961 IESPHPVDWNDTKSRDCAVLSAIIDLI 987
>MGI|MGI:1919412 [details] [associations]
symbol:Dhx36 "DEAH (Asp-Glu-Ala-His) box polypeptide 36"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IDA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009615 "response to virus"
evidence=IMP] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0043330 "response to exogenous dsRNA" evidence=IMP]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
MGI:MGI:1919412 GO:GO:0005524 GO:GO:0005634 GO:GO:0009615
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GO:GO:0043330 EMBL:CH466530 HOGENOM:HOG000247063
GeneTree:ENSGT00550000074257 CTD:170506 HOVERGEN:HBG081438
KO:K14442 OMA:RIRNRSY OrthoDB:EOG4K6G3J EMBL:AF448804 EMBL:AC114424
EMBL:AK129373 EMBL:AK013031 IPI:IPI00351266 RefSeq:NP_082412.2
UniGene:Mm.224233 ProteinModelPortal:Q8VHK9 DIP:DIP-48576N
STRING:Q8VHK9 PhosphoSite:Q8VHK9 PaxDb:Q8VHK9 PRIDE:Q8VHK9
Ensembl:ENSMUST00000029336 GeneID:72162 KEGG:mmu:72162
UCSC:uc008pjn.2 InParanoid:Q8VHK9 ChiTaRS:DHX36 NextBio:335597
CleanEx:MM_DHX36 Genevestigator:Q8VHK9
GermOnline:ENSMUSG00000027770 Uniprot:Q8VHK9
Length = 1001
Score = 1665 (591.2 bits), Expect = 2.7e-171, P = 2.7e-171
Identities = 374/949 (39%), Positives = 555/949 (58%)
Query: 121 WWGK--LEQMKRGEEQEMIIKRKFSRADQQTLADMAHQLGLHFHAYNKGKALAVSKVPLP 178
W+ K ++ K E QE + R ++Q + + + + + K S+ +
Sbjct: 58 WYAKKQTQKNKEAERQERAVVHMDERREEQ-IVQLLNSV--------QAKTDKDSEAQIS 108
Query: 179 MYRPDLDERHGSTEKELQMSIETERRVGN----LLNSSQGNVPVNDSGIESSEVARRPKL 234
+ P+ D +G TE + I +E+++ N LLN + + D S + R +
Sbjct: 109 WFAPE-DHGYG-TEVSSEKKINSEKKLDNQEKKLLNQEKKTFRITDK----SYIDRDSEY 162
Query: 235 SVKVANTISPPQSDSAKERLNVILKERQEKLKSSDSGKAMLSFREKLPAFKMKAEFLKAV 294
++ + P S + L L++ Q K K+ M FR+KLP++ M+ E + +
Sbjct: 163 LLQE----NEPNL-SLDQHL---LEDLQRK-KTDPRYIEMQRFRKKLPSYGMQKELVNLI 213
Query: 295 AENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQPXXXXXXXXXXXXXXER 354
+QV V+SGETGCGKTTQ+ QFIL+ + +G+ C I+CTQP ER
Sbjct: 214 NNHQVTVISGETGCGKTTQVTQFILDNYIERGKGSACRIVCTQPRRISAISVAERVATER 273
Query: 355 GENLGE--TVGYQIRLESKRSA-QTRLLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERG 411
E+ G + GYQIRL+S+ Q +L+CTTG++L+ L D LS VSH+++DEIHER
Sbjct: 274 AESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSDSRLSSVSHIVLDEIHERN 333
Query: 412 MNEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGNAPTVHIPGLTFPVTDLFLED 471
+ D MSAT+NA+ FS+YFGN P +HIPG TFPV + LED
Sbjct: 334 LQSDVLMTVIKDLLHFRSDLKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLED 393
Query: 472 VLEKTRYKMNSK--LDSFQGNXXXXXXQDSKKDHLTALFED---VDIDSNYKNYRASTRA 526
++EK RY + K F+ +K+ A++++ I Y AST
Sbjct: 394 IIEKIRYVPDQKEHRSQFKRGFMQGHVNRQEKEEKEAIYKERWPAYIKELRTRYSASTVD 453
Query: 527 SLEAWSAEQIDLGLVESTIEYICRHEGDGAILVFLTGWNDISKLLDQIKVNKFLGDPNKF 586
L+ +++DL L+ + I YI E DGAILVFL GW++IS L D + +++ + +KF
Sbjct: 454 VLQMMDDDKVDLNLIAALIRYIVLEEEDGAILVFLPGWDNISTLHDLL-MSQVMFKSDKF 512
Query: 587 LVLPLHGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDA 646
L++PLH MPT+NQ ++F + PP RKIV+ATNIAE+SITIDDVVYV+D GK KET +D
Sbjct: 513 LIIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDT 572
Query: 647 LNKLACLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQLPEILRTPLQEL 706
N ++ + W+SKA+A QR+GRAGRVQPG CY LY + + YQLPEILRTPL+EL
Sbjct: 573 QNNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEEL 632
Query: 707 CLHIKSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVD 766
CL IK L+LG + FLS+ + PP AV +I+ L + ALD E LTPLG HL LPV+
Sbjct: 633 CLQIKILRLGGIAYFLSRLMDPPSNEAVVLSIKHLMELSALDKQEELTPLGVHLARLPVE 692
Query: 767 PNIGKMLLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIAL 826
P+IGKM+L GA+F CL+P LTIAA+L+ ++PFV+P+ +K D ++ A ++ SDH+ +
Sbjct: 693 PHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKIADARRKELAKETRSDHLTV 752
Query: 827 LKAFDGYKDAKRN--RRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKS--KGP 882
+ AF+G+++AKR R E+D+CWE FLS TLQM+ +M+ QF + L GFV K P
Sbjct: 753 VNAFEGWEEAKRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRSPKDP 812
Query: 883 SAYNRYSHDLEMVCAILCAGLYPNVVQCK----RKGKRAVFYTKEVGQVALHPSSVNANQ 938
A N S + +++ A++CAGLYP V + + +K K +TK G V++HP SVN Q
Sbjct: 813 KA-NINSDNEKIIKAVICAGLYPKVAKIRLNLGKKRKMVKVHTKSDGLVSIHPKSVNVEQ 871
Query: 939 NNFPLPYMVYSEMVKTNNINVYDSTNISEYALLLFGGNL-IPSKTGEGIEMLGGYLHFSA 997
+F +++Y ++T++I +YD T +S Y LL FGG++ I + I + ++ F +
Sbjct: 872 TDFHYNWLIYHLKMRTSSIYLYDCTEVSPYCLLFFGGDISIQKDKDQEIIAVDEWIVFQS 931
Query: 998 SKTVLELIRKLRGELDKLLNRKIEDPRV----DLSVEGKAVVSAVVELL 1042
+ + L++ LR ELD LL KIE P D AV+SA+++L+
Sbjct: 932 PERIAHLVKGLRKELDSLLQEKIESPHPVDWDDTKSRDCAVLSAILDLI 980
>UNIPROTKB|Q05B79 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043330 "response to exogenous dsRNA" evidence=IEA]
[GO:0009615 "response to virus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0009615 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0043330 HOGENOM:HOG000247063
GeneTree:ENSGT00550000074257 CTD:170506 HOVERGEN:HBG081438
KO:K14442 OMA:RIRNRSY OrthoDB:EOG4K6G3J EMBL:DAAA02002574
EMBL:DAAA02002573 EMBL:BC122652 IPI:IPI00686397
RefSeq:NP_001073720.1 UniGene:Bt.103344 Ensembl:ENSBTAT00000008082
GeneID:509583 KEGG:bta:509583 InParanoid:Q05B79 NextBio:20869030
Uniprot:Q05B79
Length = 1010
Score = 1662 (590.1 bits), Expect = 5.6e-171, P = 5.6e-171
Identities = 351/818 (42%), Positives = 500/818 (61%)
Query: 246 QSDSAKERLNVILKERQEKLKSSDSGKAMLSFREKLPAFKMKAEFLKAVAENQVLVVSGE 305
Q + L+ L E +K K+ M FREKLP++ M+ E + + +QV V+SGE
Sbjct: 174 QENEPDATLDQQLLEDLQKKKTDLRYIEMQRFREKLPSYGMQKELVNMIDNHQVTVISGE 233
Query: 306 TGCGKTTQLPQFILEEELSSLRGADCNIICTQPXXXXXXXXXXXXXXERGENLGE--TVG 363
TGCGKTTQ+ QFIL+ + +G+ C I+CTQP ER E+ G + G
Sbjct: 234 TGCGKTTQVTQFILDNYIERGKGSACRIVCTQPRRISAISVAERVAAERAESCGNGNSTG 293
Query: 364 YQIRLESKRSA-QTRLLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFXXXXXX 422
YQIRL+S+ Q +L+CTTG++L+ L DP LS VSH+++DEIHER + D
Sbjct: 294 YQIRLQSRLPRKQGSILYCTTGIILQWLQSDPHLSSVSHIVLDEIHERNLQSDVLMTVVK 353
Query: 423 XXXXXXXXXXXXXMSATINADLFSKYFGNAPTVHIPGLTFPVTDLFLEDVLEKTRYKMNS 482
MSAT+NA+ FS+YFGN P +HIPG TFPV + LED++EK RY
Sbjct: 354 DLLSYRPDLKVVLMSATLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEKIRYVPEQ 413
Query: 483 K--LDSFQGNXXXXXXQDSKKDHLTALFEDV---DIDSNYKNYRASTRASLEAWSAEQID 537
K F+ +K+ A++++ + + Y AST +E E++D
Sbjct: 414 KEHRSQFKKGFMQGHVNRQEKEEKEAIYKERWPGYLRELRQRYSASTVDVVEMMDDEKVD 473
Query: 538 LGLVESTIEYICRHEGDGAILVFLTGWNDISKLLDQIKVNKFLGDPNKFLVLPLHGSMPT 597
L L+ + I YI E DGAILVFL GW++IS L D + +++ + +KF+++PLH MPT
Sbjct: 474 LNLIAALIRYIVLEEEDGAILVFLPGWDNISTLHDLL-MSQVMFKSDKFIIIPLHSLMPT 532
Query: 598 INQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSW 657
+NQ ++F R PP RKIV+ATNIAE+SITIDDVVYV+D GK KET +D N ++ + W
Sbjct: 533 VNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEW 592
Query: 658 ISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQLPEILRTPLQELCLHIKSLQLGT 717
+SKA+A QR+GRAGRVQPG CY LY + + YQLPEILRTPL+ELCL IK L+LG
Sbjct: 593 VSKANAKQRKGRAGRVQPGHCYHLYNSLRASLLDDYQLPEILRTPLEELCLQIKILRLGG 652
Query: 718 VGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGKMLLMGA 777
+ FLS+ + PP AV +I+ L + ALD E LTPLG HL LPV+P+IGKM+L GA
Sbjct: 653 IAHFLSRLMDPPSNEAVLLSIKHLMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGA 712
Query: 778 IFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAK 837
+F CL+P LTIAA+L+ ++PFV+P+ +K D ++ A D+ SDH+ ++ AF G++ AK
Sbjct: 713 LFCCLDPVLTIAASLSFKDPFVIPLGKEKVADARRKELAKDTKSDHLTVVNAFKGWEKAK 772
Query: 838 RN--RRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPS--AYNRYSHDLE 893
+ R E+D+CWE FLS TLQM+ +M+ QF + L GFV S+ P N S + +
Sbjct: 773 QRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVS-SRNPQDPESNINSDNEK 831
Query: 894 MVCAILCAGLYPNVVQCK----RKGKRAVFYTKEVGQVALHPSSVNANQNNFPLPYMVYS 949
++ A++CAGLYP V + + +K K YTK G VA+HP SVN Q F +++Y
Sbjct: 832 IIKAVICAGLYPKVAKIRLNLGKKRKMVKVYTKTDGVVAIHPKSVNVEQTEFNYNWLIYH 891
Query: 950 EMVKTNNINVYDSTNISEYALLLFGGNLIPSKTGEGIEM-LGGYLHFSASKTVLELIRKL 1008
++T++I +YD T +S Y LL FGG++ K + + + ++ F + + L+++L
Sbjct: 892 LKMRTSSIYLYDCTEVSPYCLLFFGGDISIQKDNDQETIAVDEWIIFQSPARIAHLVKEL 951
Query: 1009 RGELDKLLNRKIEDPRV----DLSVEGKAVVSAVVELL 1042
R ELD LL KIE P D AV+SA+++L+
Sbjct: 952 RKELDILLQEKIESPHPVDWKDTKSRDCAVLSAIIDLI 989
>UNIPROTKB|F6V8H1 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 OMA:RIRNRSY Ensembl:ENSCAFT00000013769
EMBL:AAEX03013695 Uniprot:F6V8H1
Length = 1122
Score = 1661 (589.8 bits), Expect = 7.2e-171, P = 7.2e-171
Identities = 349/818 (42%), Positives = 503/818 (61%)
Query: 246 QSDSAKERLNVILKERQEKLKSSDSGKAMLSFREKLPAFKMKAEFLKAVAENQVLVVSGE 305
Q + L+ L E K KS M FREKLP++ M+ E + + +QV V+SGE
Sbjct: 286 QENEPDVALDQQLLEDLRKKKSDLRYIEMQHFREKLPSYGMQKELVNMIDNHQVTVISGE 345
Query: 306 TGCGKTTQLPQFILEEELSSLRGADCNIICTQPXXXXXXXXXXXXXXERGENLGE--TVG 363
TGCGKTTQ+ QFIL++ + +G+ C I+CTQP ER E+ G + G
Sbjct: 346 TGCGKTTQVTQFILDDYIERGKGSACRIVCTQPRRISAISVAERVAAERAESCGNGNSTG 405
Query: 364 YQIRLESKRSA-QTRLLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFXXXXXX 422
YQIRL+S+ Q +L+CTTG++L+ L D LS VSH+++DEIHER + D
Sbjct: 406 YQIRLQSRLPRKQGSILYCTTGIILQWLQSDSHLSSVSHIVLDEIHERNLQSDVLMTVIK 465
Query: 423 XXXXXXXXXXXXXMSATINADLFSKYFGNAPTVHIPGLTFPVTDLFLEDVLEKTRY--KM 480
MSAT+NA+ FS+YFGN P +HIPG TFPV + LED++EK RY +
Sbjct: 466 DLLNFRPDLKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEKIRYVPEQ 525
Query: 481 NSKLDSFQGNXXXXXXQDSKKDHLTALFED--VD-IDSNYKNYRASTRASLEAWSAEQID 537
+ F+ +K+ A++++ D + K Y AST +E +++D
Sbjct: 526 KEQRSQFKRGFMQGHVNRQEKEEKEAIYKERWPDYVRELRKRYSASTVDVMEMIDDDKVD 585
Query: 538 LGLVESTIEYICRHEGDGAILVFLTGWNDISKLLDQIKVNKFLGDPNKFLVLPLHGSMPT 597
L L+ + I +I E DGAILVFL GW++IS L D + +++ + ++FL++PLH MPT
Sbjct: 586 LNLIAALIRHIVLEEEDGAILVFLPGWDNISTLHDLL-MSQVMFKSDRFLIIPLHSLMPT 644
Query: 598 INQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSW 657
+NQ ++F + PP RKIV+ATNIAE+SITIDDVVYV+D GK KET +D N ++ + W
Sbjct: 645 VNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEW 704
Query: 658 ISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQLPEILRTPLQELCLHIKSLQLGT 717
+SKA+A QR+GRAGRVQPG CY LY + + YQLPEILRTPL+ELCL IK L+LG
Sbjct: 705 VSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGG 764
Query: 718 VGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGKMLLMGA 777
+ FLS+ + PP AV +I+ L + ALD E LTPLG HL LPV+P+IGKM+L GA
Sbjct: 765 IAYFLSRLMDPPSDEAVSLSIKHLMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGA 824
Query: 778 IFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAK 837
+F CL+P LTIAA+L+ ++PFV+P+ +K D ++ A D+ SDH+ ++ AF+G+++A+
Sbjct: 825 LFCCLDPVLTIAASLSFKDPFVIPLGKEKIADARRKELAKDTKSDHLTVVNAFEGWEEAR 884
Query: 838 RN--RRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKS--KGPSAYNRYSHDLE 893
R R E+D+CWE FLS TLQM+ +M+ QF + L GFV K P + N S + +
Sbjct: 885 RRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPKDPKS-NINSDNEK 943
Query: 894 MVCAILCAGLYPNVVQCK----RKGKRAVFYTKEVGQVALHPSSVNANQNNFPLPYMVYS 949
++ A++CAGLYP V + + +K K YTK G VA+HP SVN Q F +++Y
Sbjct: 944 IIKAVICAGLYPKVAKIRLNLGKKRKMVKVYTKTDGLVAIHPKSVNVEQTEFHYNWLIYH 1003
Query: 950 EMVKTNNINVYDSTNISEYALLLFGGNLIPSKTGEGIEM-LGGYLHFSASKTVLELIRKL 1008
++T++I +YD T +S Y LL FGG++ K + + + ++ F + + L+++L
Sbjct: 1004 LKMRTSSIYLYDCTEVSPYCLLFFGGDISIQKDNDQETIAVDEWIVFQSPARIAHLVKEL 1063
Query: 1009 RGELDKLLNRKIEDPRV----DLSVEGKAVVSAVVELL 1042
R ELD LL KIE P D AV+SA+++L+
Sbjct: 1064 RKELDTLLQEKIESPHPVDWKDTKSRDCAVLSAIIDLI 1101
>RGD|1308767 [details] [associations]
symbol:Dhx36 "DEAH (Asp-Glu-Ala-His) box polypeptide 36"
species:10116 "Rattus norvegicus" [GO:0003725 "double-stranded RNA
binding" evidence=IEA;ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009615 "response to virus" evidence=IEA;ISO]
[GO:0043330 "response to exogenous dsRNA" evidence=IEA;ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1308767 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0009615
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 GO:GO:0043330
GeneTree:ENSGT00550000074257 CTD:170506 KO:K14442 OMA:RIRNRSY
OrthoDB:EOG4K6G3J EMBL:CH474003 IPI:IPI00367998
RefSeq:NP_001101148.1 UniGene:Rn.2744 Ensembl:ENSRNOT00000019824
GeneID:310461 KEGG:rno:310461 UCSC:RGD:1308767 NextBio:662035
Uniprot:D4A2Z8
Length = 1000
Score = 1658 (588.7 bits), Expect = 1.5e-170, P = 1.5e-170
Identities = 377/949 (39%), Positives = 553/949 (58%)
Query: 121 WWGK--LEQMKRGEEQEMIIKRKFSRADQQTLADMAHQLGLHFHAYNKGKALAVSKVPLP 178
W+ K ++ K E QE + R ++Q + QL A N S+ +
Sbjct: 57 WYAKKQTQKNKEAERQERAVVHMDERREEQIV-----QLLNSVQAKNDKD----SEAQIS 107
Query: 179 MYRPDLDERHGSTEKELQMSIETERRVGN----LLNSSQGNVPVNDSGIESSEVARRPKL 234
+ P+ D +G TE + I +E+++ N LLN + + D S + R +
Sbjct: 108 WFAPE-DHGYG-TEVSSEKKINSEKKLDNQEKKLLNQEKKTYRITDK----SYIDRDSEY 161
Query: 235 SVKVANTISPPQSDSAKERLNVILKERQEKLKSSDSGKAMLSFREKLPAFKMKAEFLKAV 294
+ Q + L+ L E +K K+ M FR+KLP++ M+ E + +
Sbjct: 162 LL---------QQNEPNLGLDQQLLEDLQKKKTDPRYIEMQRFRKKLPSYGMQKELVNLI 212
Query: 295 AENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQPXXXXXXXXXXXXXXER 354
+QV V+SGETGCGKTTQ+ QFIL+ + G+ C I+CTQP ER
Sbjct: 213 NNHQVTVISGETGCGKTTQVTQFILDNYIERGIGSACRIVCTQPRRISAISVAERVAAER 272
Query: 355 GENLGE--TVGYQIRLESKRSA-QTRLLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERG 411
E+ G + GYQIRL+S+ Q +L+CTTG++L+ L D LS VSH+++DEIHER
Sbjct: 273 AESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSDSRLSSVSHIVLDEIHERN 332
Query: 412 MNEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGNAPTVHIPGLTFPVTDLFLED 471
+ D MSAT+NA+ FS+YFGN P +HIPG TFPV + LED
Sbjct: 333 LQSDVLMTVIKDLLHFRSDLKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLED 392
Query: 472 VLEKTRYKMNSK--LDSFQGNXXXXXXQDSKKDHLTALFED---VDIDSNYKNYRASTRA 526
++EK RY K F+ +K+ A++++ I Y AST
Sbjct: 393 IIEKIRYFPEQKEHRSQFKRGFMQGHVNRQEKEEKEAIYKERWPAYIKELQTRYSASTID 452
Query: 527 SLEAWSAEQIDLGLVESTIEYICRHEGDGAILVFLTGWNDISKLLDQIKVNKFLGDPNKF 586
LE +++DL L+ + I YI E DGAILVFL GW++IS L D + +++ + ++F
Sbjct: 453 VLEMMDDDKVDLNLIAALIRYIVLEEEDGAILVFLPGWDNISTLHDLL-MSQVMFKSDRF 511
Query: 587 LVLPLHGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDA 646
L++PLH MPT+NQ ++F + PP RKIV+ATNIAE+SITIDDVVYV+D GK KET +D
Sbjct: 512 LIIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDT 571
Query: 647 LNKLACLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQLPEILRTPLQEL 706
N ++ + W+SKA+A QR+GRAGRVQPG CY LY + + YQLPEILRTPL+EL
Sbjct: 572 QNNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEEL 631
Query: 707 CLHIKSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVD 766
CL IK L+LG + FLS+ + PP AV +I+ L + ALD E LTPLG HL LPV+
Sbjct: 632 CLQIKILRLGGIAYFLSRLMDPPSDEAVVLSIKHLMELSALDKQEELTPLGVHLARLPVE 691
Query: 767 PNIGKMLLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIAL 826
P+IGKM+L GA+F CL+P LTIAA+L+ ++PFV+P+ +K D ++ A ++ SDH+ +
Sbjct: 692 PHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKIADARRKELAKETRSDHLTV 751
Query: 827 LKAFDGYKDAKRN--RRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKS--KGP 882
+ AF+G+++AKR R E+D+CWE FLS TLQM+ +M+ QF + L GFV K P
Sbjct: 752 VNAFEGWEEAKRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRSPKDP 811
Query: 883 SAYNRYSHDLEMVCAILCAGLYPNVVQCK----RKGKRAVFYTKEVGQVALHPSSVNANQ 938
A N S + +++ A++CAGLYP V + + +K K +TK G V++HP SVN Q
Sbjct: 812 KA-NINSDNEKIIKAVICAGLYPKVAKIRLNLGKKRKMVKVHTKSDGLVSIHPKSVNVEQ 870
Query: 939 NNFPLPYMVYSEMVKTNNINVYDSTNISEYALLLFGGNL-IPSKTGEGIEMLGGYLHFSA 997
+F +++Y ++T++I +YD T +S Y LL FGG++ I + I + ++ F +
Sbjct: 871 TDFHYNWLIYHLKMRTSSIYLYDCTEVSPYCLLFFGGDISIQKDKDQEIIAVDEWIVFQS 930
Query: 998 SKTVLELIRKLRGELDKLLNRKIEDPR-VDLS-VEGK--AVVSAVVELL 1042
+ + L++ LR ELD LL KIE P VD + + + AV+SA+++L+
Sbjct: 931 PERIAHLVKGLRKELDILLQEKIECPHPVDWNDTKSRDCAVLSAILDLI 979
>UNIPROTKB|E1C550 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003725 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0043330 GeneTree:ENSGT00550000074257
OMA:GRIAYND EMBL:AADN02021100 IPI:IPI00601151
Ensembl:ENSGALT00000016841 Uniprot:E1C550
Length = 985
Score = 1612 (572.5 bits), Expect = 1.1e-165, P = 1.1e-165
Identities = 343/810 (42%), Positives = 493/810 (60%)
Query: 258 LKERQEKLKSSDSGKAMLSFREKLPAFKM--KAEFLKAVAENQVLVVSGETGCGKTTQLP 315
LKE K KS M FREKLP++ M K E + + N+V V+SGETGCGKTTQ+
Sbjct: 163 LKEDLRKKKSDPRYIEMQRFREKLPSYGMRQKQELVNLINNNRVTVISGETGCGKTTQVT 222
Query: 316 QFILEEELSSLRGADCNIICTQPXXXXXXXXXXXXXXERGENLG--ETVGYQIRLESKRS 373
QFIL++ + +G+ C I+CTQP ER E G ++ GYQIRL+S+
Sbjct: 223 QFILDDYIERGKGSTCRIVCTQPRRISAISVAERVAAERAEACGNGKSTGYQIRLQSRLP 282
Query: 374 A-QTRLLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXX 432
Q +L+CTTG++L+ L D LS +SH+++DEIHER + D
Sbjct: 283 RKQGSILYCTTGIVLQWLQSDKHLSSISHVVLDEIHERNLQSDVLMSIIKDLLNVRLDLK 342
Query: 433 XXXMSATINADLFSKYFGNAPTVHIPGLTFPVTDLFLEDVLEKTRYKMNS-------KLD 485
MSAT+NA+ FS+YF N P +HIPG TFPV + LEDV+EK RY + K
Sbjct: 343 VILMSATLNAEKFSEYFDNCPMIHIPGFTFPVVEYLLEDVIEKLRYTPENTDRRPRWKKG 402
Query: 486 SFQGNXXXXXXQDSKKDHLTALFEDVDIDSNYKNYRASTRASLEAWSAEQIDLGLVESTI 545
QG+ ++ K++ + + + Y A T +LE +++DL L+ + I
Sbjct: 403 FMQGHISRPEKEE-KEEIYRERWPEY-LRQLRGRYSAGTIDALEMMDDDKVDLDLIAALI 460
Query: 546 EYICRHEGDGAILVFLTGWNDISKLLDQIKVNKFLGDPNKFLVLPLHGSMPTINQREIFD 605
+I E DGAILVFL GW++IS L D + +++ + ++F+++PLH MPT+NQ ++F
Sbjct: 461 RHIVLEEEDGAILVFLPGWDNISTLHDLL-MSQVMFKSDRFIIIPLHSLMPTVNQTQVFK 519
Query: 606 RPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASAHQ 665
+ PP RKIV+ATNIAE+SITIDDVV+V+D GK KET +D N ++ + W+SKA+A Q
Sbjct: 520 KTPPGVRKIVIATNIAETSITIDDVVFVIDGGKIKETHFDTQNNISTMAAEWVSKANAKQ 579
Query: 666 RRGRAGRVQPGVCYKLYPRIIHDAMLPYQLPEILRTPLQELCLHIKSLQLGTVGSFLSKA 725
R+GRAGRVQPG CY LY + + YQLPEILRTPL+ELCL IK L+LG + FLSK
Sbjct: 580 RKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILKLGGIAYFLSKL 639
Query: 726 LQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGKMLLMGAIFQCLNPA 785
+ PP AV AI L + ALD E LTPLG HL LPV+P+IGKM+L GA+F CL+P
Sbjct: 640 MDPPSRDAVMLAINHLMELNALDRQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPV 699
Query: 786 LTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAKRN--RRER 843
LTIAA+L+ ++PFV+P+ +K D ++ + ++ SDH+ ++ AF G+++ +R R E+
Sbjct: 700 LTIAASLSFKDPFVIPLGKEKVADARRKELSKNTKSDHLTVVNAFTGWEETRRRGFRTEK 759
Query: 844 DFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKS--KGPSAYNRYSHDLEMVCAILCA 901
D+CWE FLSP TLQM+ +M+ QF + L GFV+ K P + N S + +++ A++CA
Sbjct: 760 DYCWEYFLSPNTLQMLHNMKGQFAEHLLAAGFVNSRDPKDPKS-NTNSDNEKLLKAVICA 818
Query: 902 GLYPNVVQCK----RKGKRAVFYTKEVGQVALHPSSVNANQNNFPLPYMVYSEMVKTNNI 957
GLYP V + + +K K TK G V +HP SVN + F ++VY ++T++I
Sbjct: 819 GLYPKVAKIRPSFSKKRKMVKVCTKTDGTVNIHPKSVNVEETEFHYNWLVYHLKMRTSSI 878
Query: 958 NVYDSTNISEYALLLFGGNL-IPSKTGEGIEMLGGYLHFSASKTVLELIRKLRGELDKLL 1016
+YD T +S Y LL FGG++ I + + ++ F + + L++ LR ELD LL
Sbjct: 879 YLYDCTEVSPYCLLFFGGDISIQKDKDQDTIAVDEWIVFQSPARIAHLVKNLRQELDDLL 938
Query: 1017 NRKIEDPRV----DLSVEGKAVVSAVVELL 1042
KIE+P D AVV+A+++L+
Sbjct: 939 QEKIENPHPVDWNDTKSRDSAVVAAIIDLI 968
>UNIPROTKB|F5GZS0 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0003676
EMBL:AC018452 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AC134026
HGNC:HGNC:14410 IPI:IPI00922725 ProteinModelPortal:F5GZS0
SMR:F5GZS0 PRIDE:F5GZS0 Ensembl:ENST00000544526 ArrayExpress:F5GZS0
Bgee:F5GZS0 Uniprot:F5GZS0
Length = 994
Score = 1575 (559.5 bits), Expect = 9.3e-162, P = 9.3e-162
Identities = 344/807 (42%), Positives = 492/807 (60%)
Query: 257 ILKERQEKLKSSDSGKAMLSFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQ 316
+L++ Q+K K+ M FREKLP++ M+ E + + +QV V+SGETGCGKTTQ+ Q
Sbjct: 184 LLEDLQKK-KNDLRYIEMQHFREKLPSYGMQKELVNLIDNHQVTVISGETGCGKTTQVTQ 242
Query: 317 FILEEELSSLRGADCNIICTQPXXXXXXXXXXXXXXERGENLGE--TVGYQIRLESKRSA 374
FIL+ + +G+ C I+CTQP ER E+ G + GYQIRL+S+
Sbjct: 243 FILDNYIERGKGSACRIVCTQPRRISAISVAERVAAERAESCGSGNSTGYQIRLQSRLPR 302
Query: 375 -QTRLLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXX 433
Q +L+CTTG++L+ L DP LS VSH+++DEIHER + D
Sbjct: 303 KQGSILYCTTGIILQWLQSDPYLSSVSHIVLDEIHERNLQSDVLMTVVKDLLNFRSDLKV 362
Query: 434 XXMSATINADLFSKYFGNAPTVHIPGLTFPVTDLFLEDVLEKTRYKMNSK--LDSFQGNX 491
MSAT+NA+ FS+YFGN P +HIPG TFPV + LEDV+EK RY K F+
Sbjct: 363 ILMSATLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDVIEKIRYVPEQKEHRSQFKRGF 422
Query: 492 XXXXXQDSKKDHLTALFED--VD-IDSNYKNYRASTRASLEAWSAEQIDLGLVESTIEYI 548
+K+ A++++ D + + Y AST +E +++DL L+ + I YI
Sbjct: 423 MQGHVNRQEKEEKEAIYKERWPDYVRELRRRYSASTVDVIEMMEDDKVDLNLIVALIRYI 482
Query: 549 CRHEGDGAILVFLTGWNDISKLLDQIKVNKFLGDPNKFLVLPLHGSMPTINQREIFDRPP 608
E DGAILVFL GW++IS L D + V+ G+M ++F R P
Sbjct: 483 VLEEEDGAILVFLPGWDNISTLHDLLMSQ----------VMFKSGTMS-----QVFKRTP 527
Query: 609 PNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASAHQRRG 668
P RKIV+ATNIAE+SITIDDVVYV+D GK KET +D N ++ + W+SKA+A QR+G
Sbjct: 528 PGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKG 587
Query: 669 RAGRVQPGVCYKLYPRIIHDAMLPYQLPEILRTPLQELCLHIKSLQLGTVGSFLSKALQP 728
RAGRVQPG CY LY + + YQLPEILRTPL+ELCL IK L+LG + FLS+ + P
Sbjct: 588 RAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYFLSRLMDP 647
Query: 729 PDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGKMLLMGAIFQCLNPALTI 788
P AV +I L + ALD E LTPLG HL LPV+P+IGKM+L GA+F CL+P LTI
Sbjct: 648 PSNEAVLLSIRHLMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTI 707
Query: 789 AAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAKRN--RRERDFC 846
AA+L+ ++PFV+P+ +K D ++ A D+ SDH+ ++ AF+G+++A+R R E+D+C
Sbjct: 708 AASLSFKDPFVIPLGKEKIADARRKELAKDTRSDHLTVVNAFEGWEEARRRGFRYEKDYC 767
Query: 847 WENFLSPITLQMMEDMRSQFLDLLSDIGFVDKS--KGPSAYNRYSHDLEMVCAILCAGLY 904
WE FLS TLQM+ +M+ QF + L GFV K P + N S + +++ A++CAGLY
Sbjct: 768 WEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPKDPES-NINSDNEKIIKAVICAGLY 826
Query: 905 PNVVQCK----RKGKRAVFYTKEVGQVALHPSSVNANQNNFPLPYMVYSEMVKTNNINVY 960
P V + + +K K YTK G VA+HP SVN Q +F +++Y ++T++I +Y
Sbjct: 827 PKVAKIRLNLGKKRKMVKVYTKTDGLVAVHPKSVNVEQTDFHYNWLIYHLKMRTSSIYLY 886
Query: 961 DSTNISEYALLLFGGNLIPSKTGEGIEM-LGGYLHFSASKTVLELIRKLRGELDKLLNRK 1019
D T +S Y LL FGG++ K + + + ++ F + + L+++LR ELD LL K
Sbjct: 887 DCTEVSPYCLLFFGGDISIQKDNDQETIAVDEWIVFQSPARIAHLVKELRKELDILLQEK 946
Query: 1020 IEDPR-VDLS-VEGK--AVVSAVVELL 1042
IE P VD + + + AV+SA+++L+
Sbjct: 947 IESPHPVDWNDTKSRDCAVLSAIIDLI 973
>UNIPROTKB|E2QTL7 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
Ensembl:ENSCAFT00000013769 Uniprot:E2QTL7
Length = 988
Score = 1570 (557.7 bits), Expect = 3.1e-161, P = 3.1e-161
Identities = 343/818 (41%), Positives = 488/818 (59%)
Query: 246 QSDSAKERLNVILKERQEKLKSSDSGKAMLSFREKLPAFKMKAEFLKAVAENQVLVVSGE 305
Q + L+ L E K KS M FREKLP++ M+ E + + +QV V+SGE
Sbjct: 166 QENEPDVALDQQLLEDLRKKKSDLRYIEMQHFREKLPSYGMQKELVNMIDNHQVTVISGE 225
Query: 306 TGCGKTTQLPQFILEEELSSLRGADCNIICTQPXXXXXXXXXXXXXXERGENLGE--TVG 363
TGCGKTTQ+ QFIL++ + +G+ C I+CTQP ER E+ G + G
Sbjct: 226 TGCGKTTQVTQFILDDYIERGKGSACRIVCTQPRRISAISVAERVAAERAESCGNGNSTG 285
Query: 364 YQIRLESKRSA-QTRLLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFXXXXXX 422
YQIRL+S+ Q +L+CTTG++L+ L D LS VSH+++DEIHER + D
Sbjct: 286 YQIRLQSRLPRKQGSILYCTTGIILQWLQSDSHLSSVSHIVLDEIHERNLQSDVLMTVIK 345
Query: 423 XXXXXXXXXXXXXMSATINADLFSKYFGNAPTVHIPGLTFPVTDLFLEDVLEKTRY--KM 480
MSAT+NA+ FS+YFGN P +HIPG TFPV + LED++EK RY +
Sbjct: 346 DLLNFRPDLKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEKIRYVPEQ 405
Query: 481 NSKLDSFQGNXXXXXXQDSKKDHLTALFED--VD-IDSNYKNYRASTRASLEAWSAEQID 537
+ F+ +K+ A++++ D + K Y AST +E +++D
Sbjct: 406 KEQRSQFKRGFMQGHVNRQEKEEKEAIYKERWPDYVRELRKRYSASTVDVMEMIDDDKVD 465
Query: 538 LGLVESTIEYICRHEGDGAILVFLTGWNDISKLLDQIKVNKFLGDPNKFLVLPLHGSMPT 597
L L+ + I +I E DGAILVFL GW++IS L D L+ + T
Sbjct: 466 LNLIAALIRHIVLEEEDGAILVFLPGWDNISTLHD-------------LLMSQVMFKSDT 512
Query: 598 INQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSW 657
I Q +F + PP RKIV+ATNIAE+SITIDDVVYV+D GK KET +D N ++ + W
Sbjct: 513 IGQ--VFKKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEW 570
Query: 658 ISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQLPEILRTPLQELCLHIKSLQLGT 717
+SKA+A QR+GRAGRVQPG CY LY + + YQLPEILRTPL+ELCL IK L+LG
Sbjct: 571 VSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGG 630
Query: 718 VGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGKMLLMGA 777
+ FLS+ + PP AV +I+ L + ALD E LTPLG HL LPV+P+IGKM+L GA
Sbjct: 631 IAYFLSRLMDPPSDEAVSLSIKHLMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGA 690
Query: 778 IFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAK 837
+F CL+P LTIAA+L+ ++PFV+P+ +K D ++ A D+ SDH+ ++ AF+G+++A+
Sbjct: 691 LFCCLDPVLTIAASLSFKDPFVIPLGKEKIADARRKELAKDTKSDHLTVVNAFEGWEEAR 750
Query: 838 RN--RRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKS--KGPSAYNRYSHDLE 893
R R E+D+CWE FLS TLQM+ +M+ QF + L GFV K P + N S + +
Sbjct: 751 RRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPKDPKS-NINSDNEK 809
Query: 894 MVCAILCAGLYPNVVQCK----RKGKRAVFYTKEVGQVALHPSSVNANQNNFPLPYMVYS 949
++ A++CAGLYP V + + +K K YTK G VA+HP SVN Q F +++Y
Sbjct: 810 IIKAVICAGLYPKVAKIRLNLGKKRKMVKVYTKTDGLVAIHPKSVNVEQTEFHYNWLIYH 869
Query: 950 EMVKTNNINVYDSTNISEYALLLFGGNLIPSKTGEGIEM-LGGYLHFSASKTVLELIRKL 1008
++T++I +YD T +S Y LL FGG++ K + + + ++ F + + L+++L
Sbjct: 870 LKMRTSSIYLYDCTEVSPYCLLFFGGDISIQKDNDQETIAVDEWIVFQSPARIAHLVKEL 929
Query: 1009 RGELDKLLNRKIEDPRV----DLSVEGKAVVSAVVELL 1042
R ELD LL KIE P D AV+SA+++L+
Sbjct: 930 RKELDTLLQEKIESPHPVDWKDTKSRDCAVLSAIIDLI 967
>UNIPROTKB|E7EWK3 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0009615 GO:GO:0003725
EMBL:AC018452 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 GO:GO:0043330
EMBL:AC134026 HGNC:HGNC:14410 IPI:IPI00945848
ProteinModelPortal:E7EWK3 SMR:E7EWK3 Ensembl:ENST00000481941
ArrayExpress:E7EWK3 Bgee:E7EWK3 Uniprot:E7EWK3
Length = 797
Score = 1530 (543.6 bits), Expect = 5.5e-157, P = 5.5e-157
Identities = 318/701 (45%), Positives = 443/701 (63%)
Query: 257 ILKERQEKLKSSDSGKAMLSFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQ 316
+L++ Q+K K+ M FREKLP++ M+ E + + +QV V+SGETGCGKTTQ+ Q
Sbjct: 98 LLEDLQKK-KNDLRYIEMQHFREKLPSYGMQKELVNLIDNHQVTVISGETGCGKTTQVTQ 156
Query: 317 FILEEELSSLRGADCNIICTQPXXXXXXXXXXXXXXERGENLGE--TVGYQIRLESKRSA 374
FIL+ + +G+ C I+CTQP ER E+ G + GYQIRL+S+
Sbjct: 157 FILDNYIERGKGSACRIVCTQPRRISAISVAERVAAERAESCGSGNSTGYQIRLQSRLPR 216
Query: 375 -QTRLLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXX 433
Q +L+CTTG++L+ L DP LS VSH+++DEIHER + D
Sbjct: 217 KQGSILYCTTGIILQWLQSDPYLSSVSHIVLDEIHERNLQSDVLMTVVKDLLNFRSDLKV 276
Query: 434 XXMSATINADLFSKYFGNAPTVHIPGLTFPVTDLFLEDVLEKTRYKMNSK--LDSFQGNX 491
MSAT+NA+ FS+YFGN P +HIPG TFPV + LEDV+EK RY K F+
Sbjct: 277 ILMSATLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDVIEKIRYVPEQKEHRSQFKRGF 336
Query: 492 XXXXXQDSKKDHLTALFED--VD-IDSNYKNYRASTRASLEAWSAEQIDLGLVESTIEYI 548
+K+ A++++ D + + Y AST +E +++DL L+ + I YI
Sbjct: 337 MQGHVNRQEKEEKEAIYKERWPDYVRELRRRYSASTVDVIEMMEDDKVDLNLIVALIRYI 396
Query: 549 CRHEGDGAILVFLTGWNDISKLLDQIKVNKFLGDPNKFLVLPLHGSMPTINQREIFDRPP 608
E DGAILVFL GW++IS L D + +++ + +KFL++PLH MPT+NQ ++F R P
Sbjct: 397 VLEEEDGAILVFLPGWDNISTLHDLL-MSQVMFKSDKFLIIPLHSLMPTVNQTQVFKRTP 455
Query: 609 PNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASAHQRRG 668
P RKIV+ATNIAE+SITIDDVVYV+D GK KET +D N ++ + W+SKA+A QR+G
Sbjct: 456 PGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKG 515
Query: 669 RAGRVQPGVCYKLYPRIIHDAMLPYQLPEILRTPLQELCLHIKSLQLGTVGSFLSKALQP 728
RAGRVQPG CY LY + + YQLPEILRTPL+ELCL IK L+LG + FLS+ + P
Sbjct: 516 RAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYFLSRLMDP 575
Query: 729 PDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGKMLLMGAIFQCLNPALTI 788
P AV +I L + ALD E LTPLG HL LPV+P+IGKM+L GA+F CL+P LTI
Sbjct: 576 PSNEAVLLSIRHLMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTI 635
Query: 789 AAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAKRN--RRERDFC 846
AA+L+ ++PFV+P+ +K D ++ A D+ SDH+ ++ AF+G+++A+R R E+D+C
Sbjct: 636 AASLSFKDPFVIPLGKEKIADARRKELAKDTRSDHLTVVNAFEGWEEARRRGFRYEKDYC 695
Query: 847 WENFLSPITLQMMEDMRSQFLDLLSDIGFVDKS--KGPSAYNRYSHDLEMVCAILCAGLY 904
WE FLS TLQM+ +M+ QF + L GFV K P + N S + +++ A++CAGLY
Sbjct: 696 WEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPKDPES-NINSDNEKIIKAVICAGLY 754
Query: 905 PNVVQCK----RKGKRAVFYTKEVGQVALHPSSVNANQNNF 941
P V + + +K K YTK G VA+HP SVN Q +F
Sbjct: 755 PKVAKIRLNLGKKRKMVKVYTKTDGLVAVHPKSVNVEQTDF 795
>ZFIN|ZDB-GENE-030131-4078 [details] [associations]
symbol:dhx57 "DEAH (Asp-Glu-Ala-Asp/His) box
polypeptide 57" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001650 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00642 Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-030131-4078 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00550000074257
EMBL:BX248102 EMBL:AL935288 EMBL:CT998560 IPI:IPI00513320
Ensembl:ENSDART00000080351 ArrayExpress:F1QCB1 Bgee:F1QCB1
Uniprot:F1QCB1
Length = 1430
Score = 760 (272.6 bits), Expect = 1.7e-153, Sum P(4) = 1.7e-153
Identities = 172/408 (42%), Positives = 258/408 (63%)
Query: 485 DSFQG-NXXXXXXQDSKKDHLT-ALFEDVDIDSNYKNYRASTRASLEAWSAEQIDLGLVE 542
D + G + ++S KD + D+ Y NY S +L A ++I++ LVE
Sbjct: 816 DDYGGWSFTSFRNKESVKDSVPDQQLSQQDLTVRYSNYSKSVVKTLAAMDLDKINMDLVE 875
Query: 543 STIEYICRHEGD-----GAILVFLTGWNDISKLLDQIKVNKFLGD--PNKFLVLPLHGSM 595
S +E+I +GD GA+LVFL G +I +L +Q++ N+ + N+ +V PLH S+
Sbjct: 876 SLLEWIV--DGDHSYPPGAVLVFLPGLAEIKQLYEQLQSNRMFNNRRTNRCVVYPLHSSL 933
Query: 596 PTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLP 655
Q+ +F RP KI+++TNIAE+S+TIDDVVYV+D G+ KE YDA + L
Sbjct: 934 SNEEQQAVFTRPQNGVTKIIISTNIAETSVTIDDVVYVIDSGRMKEKRYDASRSMESLED 993
Query: 656 SWISKASAHQRRGRAGRVQPGVCYKLYP--RIIHDAMLPYQLPEILRTPLQELCLHIKSL 713
W+S+A+A QR+GRAGRV GVC+ L+ R H + QLPEI R PL++LCL +K L
Sbjct: 994 VWVSRANALQRKGRAGRVASGVCFHLFTSHRFEHH-LSQQQLPEIQRVPLEQLCLRVKVL 1052
Query: 714 QLGT---VGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIG 770
++ + S S+ ++PP +++ A + L +GAL D E+LTPLG HL LPVD IG
Sbjct: 1053 EVFAERPLDSVFSQLIEPPTEGSLEAAKQRLCALGALTDEESLTPLGWHLACLPVDVRIG 1112
Query: 771 KMLLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAF 830
K++L+GAIF+CL+PALTIAA+LA ++PFV P + ++E +E K +F+ + SDH+AL++A+
Sbjct: 1113 KLMLLGAIFRCLDPALTIAASLAFKSPFVSPWDKREEANEKKLAFSLAN-SDHLALMQAY 1171
Query: 831 DGYKDAKRN--RRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFV 876
G+ +A ++ + +C ENFLS LQ + ++ QF +LLSDIGFV
Sbjct: 1172 KGWCNAAQSGFKAGYQYCRENFLSIRGLQEIACLKRQFAELLSDIGFV 1219
Score = 530 (191.6 bits), Expect = 1.7e-153, Sum P(4) = 1.7e-153
Identities = 111/234 (47%), Positives = 146/234 (62%)
Query: 246 QSDSAKERLNVILKERQEKLKSSDSGKAMLSFREKLPAFKMKAEFLKAVAENQVLVVSGE 305
+++ +E + +E + K +SS +M R+KLPA++ + L+ + +NQVLV+SG
Sbjct: 548 RTEQMQEENKKLCREFKRK-RSSRRYISMQEQRQKLPAWQKREAILECLVKNQVLVISGM 606
Query: 306 TGCGKTTQLPQFILEEELSSLR-GADCNIICTQPXXXXXXXXXXXXXXERGENLGETVGY 364
TGCGKTTQ+PQFIL+ L + R NIICTQP ER E LG + GY
Sbjct: 607 TGCGKTTQIPQFILDNFLQTGRPDRVANIICTQPRRISAIAVATRVAQERAEALGHSTGY 666
Query: 365 QIRLESKRSAQTRLLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFXXXXXXXX 424
QIRLE+ RS+ TRL+FCTTGVLLR+L DP+LS V+H++VDE+HER DF
Sbjct: 667 QIRLETVRSSITRLMFCTTGVLLRRLEGDPELSGVTHVIVDEVHERTEESDFLLLVLKDL 726
Query: 425 XXXXXXXXXXXMSATINADLFSKYFGNAPTVHIPGLTFPVTDLFLEDVLEKTRY 478
MSAT+NA+LFS+YF N P +HIPG TFPV FLED + KTRY
Sbjct: 727 IVKRTDLKVIMMSATLNAELFSQYFNNCPCIHIPGRTFPVEQFFLEDAIAKTRY 780
Score = 223 (83.6 bits), Expect = 1.7e-153, Sum P(4) = 1.7e-153
Identities = 50/136 (36%), Positives = 80/136 (58%)
Query: 913 KGKRAVFYTKEVGQVALHPSSVNANQNNFPLPYMVYSEMVKTNNINVYDSTNISEYALLL 972
K + F TK G V +HPSSVN + ++ PY+VY E VKT+ + + D + + Y ++L
Sbjct: 1292 KAEEQRFMTKSDGAVHIHPSSVNFSVRHYDSPYLVYHEKVKTSRVFIRDCSMVCVYPMVL 1351
Query: 973 FGGNLIPSKTGEG---IEMLGGYLHFSA-SKTVLELIRKLRGELDKLLNRKIEDPRVDL- 1027
FGG + + G I + G++ F+A S V EL+++LR ELD+LL KI++P +DL
Sbjct: 1352 FGGGQVNVELQRGQFIISLDDGWIKFAAASHEVAELVKELRWELDQLLEEKIKNPSMDLI 1411
Query: 1028 -SVEGKAVVSAVVELL 1042
G ++ +V L+
Sbjct: 1412 SCPRGSRIIHTIVSLI 1427
Score = 73 (30.8 bits), Expect = 1.7e-153, Sum P(4) = 1.7e-153
Identities = 26/94 (27%), Positives = 49/94 (52%)
Query: 842 ERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGF--VDKSKGPSAYNRYSHDLEMVCAIL 899
+R F LS I + + ++++ ++ +S G V ++ G A N S + +++ A+L
Sbjct: 1206 KRQFA--ELLSDIGF-VKDGLKARVIEKMSSKGSDGVLEATGYEA-NLNSDNTKLMSAML 1261
Query: 900 CAGLYPNVVQCKRKGKRAVFYTKEVGQVALHPSS 933
CA LYPNVVQ + + +K G + + P +
Sbjct: 1262 CAALYPNVVQVRSPQMKYKLTSK--GAMKMQPKA 1293
Score = 46 (21.3 bits), Expect = 8.2e-16, Sum P(3) = 8.2e-16
Identities = 20/83 (24%), Positives = 35/83 (42%)
Query: 157 LGLHFHAYNKGKALAVSKV-PLPMYRPDLDERHGSTEKELQMSIETERRVGNLLNSSQGN 215
LG F + +A S P P D+R + EK+L S+ + L+ + +G
Sbjct: 1117 LGAIFRCLDPALTIAASLAFKSPFVSP-WDKREEANEKKLAFSLANSDHLA-LMQAYKGW 1174
Query: 216 VPVNDSGIESS-EVARRPKLSVK 237
SG ++ + R LS++
Sbjct: 1175 CNAAQSGFKAGYQYCRENFLSIR 1197
Score = 39 (18.8 bits), Expect = 5.7e-102, Sum P(4) = 5.7e-102
Identities = 9/32 (28%), Positives = 16/32 (50%)
Query: 456 HIPGLTFPVTDLFLEDVLEKTRYKMNSKLDSF 487
H G+ + TD ++ED +E+ K + F
Sbjct: 170 HDDGVEYAETDDWMEDPVEEKHKKPEPVISLF 201
>UNIPROTKB|E2QX71 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR001650 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR009060 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00642 Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940
SMART:SM00165 PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 SUPFAM:SSF46934 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00550000074257 CTD:90957 KO:K13026
OMA:RAYKGWQ EMBL:AAEX03010868 RefSeq:XP_540155.1
Ensembl:ENSCAFT00000010087 GeneID:483040 KEGG:cfa:483040
Uniprot:E2QX71
Length = 1382
Score = 729 (261.7 bits), Expect = 7.7e-145, Sum P(3) = 7.7e-145
Identities = 165/392 (42%), Positives = 251/392 (64%)
Query: 497 QDSKKDHLTALFEDV-DIDSNYKNYRASTRASLEAWSAEQIDLGLVESTIEYIC--RHE- 552
QDS KD + D + + YK S ++ E+++L L+E+ +E+I +H
Sbjct: 782 QDSVKDAVPDQQLDFKQLLARYKGVSKSVIKTMSIMDFEKVNLELIEALLEWIVDGKHSY 841
Query: 553 GDGAILVFLTGWNDISKLLDQIKVNKFLGD--PNKFLVLPLHGSMPTINQREIFDRPPPN 610
GAILVFL G +I L +Q++ N + ++ +V PLH S+ + Q+ +F +PP
Sbjct: 842 PPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVVHPLHSSLSSEEQQAVFVKPPVG 901
Query: 611 KRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRA 670
KI+++TNIAE+SITIDDVVYV+D GK KE YDA + L +++S+A+A QR+GRA
Sbjct: 902 VTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRA 961
Query: 671 GRVQPGVCYKLYP-RIIHDAMLPYQLPEILRTPLQELCLHIKSLQLGT---VGSFLSKAL 726
GRV GVC+ L+ + +L QLPEI R PL++LCL IK L++ + + S S+ +
Sbjct: 962 GRVASGVCFHLFTSHHFNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSTHNLQSVFSRLI 1021
Query: 727 QPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGKMLLMGAIFQCLNPAL 786
+PP +++ + L+ +GAL E LTPLG HL +LPVD IGK++L G+IF+CL+PAL
Sbjct: 1022 EPPHTDSLRASKIRLRDLGALTPDEKLTPLGYHLASLPVDVRIGKLMLFGSIFRCLDPAL 1081
Query: 787 TIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAKRN--RRERD 844
TIAA+LA ++PFV P + ++E ++ K FA + SD++ALL+A+ G++ + + R +
Sbjct: 1082 TIAASLAFKSPFVSPWDKKEEANQKKLEFAFAN-SDYLALLRAYKGWQLSMKEGMRASYN 1140
Query: 845 FCWENFLSPITLQMMEDMRSQFLDLLSDIGFV 876
+C +NFLS LQ M ++ QF +LLSDIGFV
Sbjct: 1141 YCRQNFLSGRVLQEMASLKRQFTELLSDIGFV 1172
Score = 513 (185.6 bits), Expect = 7.7e-145, Sum P(3) = 7.7e-145
Identities = 129/366 (35%), Positives = 192/366 (52%)
Query: 173 SKVPLPMYRPDLDERHGSTEKELQMSIETERRVGNLLNSSQGNVPVNDSGIES-SEVARR 231
+++ P+ R + + T ++ +E E + +G PV +E+ S V +
Sbjct: 441 TRINNPICRKPVIPNNSFTSSQIA-EVEKESEPEEETDEDEGPAPVI---VENESYVNLK 496
Query: 232 PKLSVKVANTISPPQSDSAKERLNVILKERQEKLKSSDSGKAMLSFREKLPAFKMKAEFL 291
K+S + +++AK I K+ + K ++S +++L R+ LPA++ + L
Sbjct: 497 KKISKRYDWQAKSVYAENAK-----ICKQFRIK-QASRQFQSILQERQSLPAWEERETIL 550
Query: 292 KAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQPXXXXXXXXXXXXX 351
K ++E+QVLV+SG TGCGKTTQ+PQFIL++ LS NIICTQP
Sbjct: 551 KLLSEHQVLVISGMTGCGKTTQIPQFILDDSLSGPPEKVANIICTQPRRISAISVAERVA 610
Query: 352 XERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERG 411
ER E +G TVGYQIRLES +S+ TRLL+CTTGVLLR+L D L V+H++VDE+HER
Sbjct: 611 KERTERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRLEGDTSLQGVTHIIVDEVHERT 670
Query: 412 MNEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGNAPTVHIPGLTFPVTDLFLED 471
DF MSAT+NA+LFS+YF + P + IPG TFPV FLED
Sbjct: 671 EESDFLLLVLKDIVLQRPNLQVILMSATLNAELFSEYFSSCPVITIPGRTFPVDQFFLED 730
Query: 472 VLEKTRYKMNSKLDSFQGNXXXXXXQDSKKDHLTALFEDVDIDSNYKNYRASTRASLEAW 531
+ TRY + + + + K FE+V+ D + + +A
Sbjct: 731 AIAVTRYVLQDG-SPYMRSMKQMTKEKLKARRSRTAFEEVEEDLRLSLHLQHQDSVKDAV 789
Query: 532 SAEQID 537
+Q+D
Sbjct: 790 PDQQLD 795
Score = 240 (89.5 bits), Expect = 7.7e-145, Sum P(3) = 7.7e-145
Identities = 53/141 (37%), Positives = 84/141 (59%)
Query: 908 VQCKRKGKRAVFYTKEVGQVALHPSSVNANQNNFPLPYMVYSEMVKTNNINVYDSTNISE 967
V+ + K F TK G V +HPSSVN +F PY+VY E +KT+ + + D + +S
Sbjct: 1239 VRMQPKSDELKFVTKNDGYVHIHPSSVNYQVRHFDSPYLVYHEKIKTSRVFIRDCSMVSV 1298
Query: 968 YALLLFGGNLIPSKTGEG---IEMLGGYLHFSA-SKTVLELIRKLRGELDKLLNRKIEDP 1023
Y L+LFGG + + G + + G++ F+A S V EL+++LR ELD+LL KI++P
Sbjct: 1299 YPLVLFGGGQVSVQLQRGEFVVSLDDGWIRFAAASHQVAELVKELRCELDQLLQDKIKNP 1358
Query: 1024 RVDLSV--EGKAVVSAVVELL 1042
+DL G ++S +V+L+
Sbjct: 1359 SIDLCTCPRGSRIISTIVKLV 1379
Score = 87 (35.7 bits), Expect = 1.0e-128, Sum P(3) = 1.0e-128
Identities = 24/61 (39%), Positives = 34/61 (55%)
Query: 874 GFVDKSKGPSAYNRYSHDLEMVCAILCAGLYPNVVQCKR-KGKRAVFYTKEVGQVALHPS 932
G +D + G A N + + +++ A+LCA LYPNVVQ K +GK F G V + P
Sbjct: 1190 GILDAT-GEEA-NSNAENPKLISAMLCAALYPNVVQVKSPEGK---FQKTSTGAVRMQPK 1244
Query: 933 S 933
S
Sbjct: 1245 S 1245
Score = 38 (18.4 bits), Expect = 2.6e-14, Sum P(2) = 2.6e-14
Identities = 15/48 (31%), Positives = 18/48 (37%)
Query: 679 YKLYPRIIHDAMLPYQLPEILRTPLQE----LC-LHIKSLQLGTVGSF 721
Y+L R D PYQ P + E C LHI G +F
Sbjct: 348 YELEIRFSKDHKYPYQAPLVAFYSTNENLPLACRLHISEFLYGKALTF 395
>TAIR|locus:2196265 [details] [associations]
symbol:AT1G58060 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
IPI:IPI00533149 RefSeq:NP_176103.2 UniGene:At.27872
ProteinModelPortal:F4I9Q5 SMR:F4I9Q5 PRIDE:F4I9Q5
EnsemblPlants:AT1G58060.1 GeneID:842173 KEGG:ath:AT1G58060
OMA:FLSYKSP Uniprot:F4I9Q5
Length = 1459
Score = 796 (285.3 bits), Expect = 4.8e-144, Sum P(3) = 4.8e-144
Identities = 175/399 (43%), Positives = 250/399 (62%)
Query: 513 IDSNYKNYRASTRASLEAWSAEQIDLGLVESTIEYICRHEGDGAILVFLTGWNDISKLLD 572
+ SNY +Y T+ +L+ + ++ID L+E I +I +GAIL+FL G +I LLD
Sbjct: 874 VSSNYNSYSDQTQQNLKRLNEDRIDYELLEELICHIDDTCEEGAILIFLPGVAEIYMLLD 933
Query: 573 QIKVN-KFLGDPNKFLVLPLHGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVV 631
+ + +F G +L LPLH S+ + QR++F RPP RK++ ATNIAE+SITIDDVV
Sbjct: 934 MLAASYRFRGPAADWL-LPLHSSIASSEQRKVFLRPPKGLRKVIAATNIAETSITIDDVV 992
Query: 632 YVVDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAML 691
YV+D GK KE Y+ KL+ ++ WIS+A+A QR GRAGRV+PG+C+ LY R + ++
Sbjct: 993 YVIDSGKHKENRYNPQKKLSSMVEDWISQANARQRTGRAGRVKPGICFSLYTRYRFEKLM 1052
Query: 692 -PYQLPEILRTPLQELCLHIKSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDM 750
PYQ+PE+LR PL ELCL IK L LG + FLS+AL+PP A+ +AI LL +GA++
Sbjct: 1053 RPYQVPEMLRMPLVELCLQIKLLGLGHIKPFLSRALEPPSEGAMTSAISLLHEVGAVEGD 1112
Query: 751 ENLTPLGRHLCTLPVDPNIGKMLLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDE 810
E LTPLG HL LPVD IGKMLL G IF CL+P L+IAA L++++PF+ P + ++ VD
Sbjct: 1113 EELTPLGHHLAKLPVDVLIGKMLLYGGIFGCLSPILSIAAFLSYKSPFIYPKDEKQNVDR 1172
Query: 811 AKRSFAGDSC------------SDHIALLKAFDGYKDAKRNR---RERDFCWENFLSPIT 855
K + D+ SDH+ ++ A+D + + R + FC FLS
Sbjct: 1173 VKLALLSDNGVSSSDLNNNDRQSDHLLMMVAYDKWVKILQERGMKAAQRFCESKFLSSSV 1232
Query: 856 LQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYSHDLEM 894
++M+ DMR QF LL+DIG ++ K R +L++
Sbjct: 1233 MRMIRDMRVQFGTLLADIGLINLPKTGEFSGRKKENLDV 1271
Score = 469 (170.2 bits), Expect = 4.8e-144, Sum P(3) = 4.8e-144
Identities = 118/298 (39%), Positives = 161/298 (54%)
Query: 198 SIETERR---VGNLLNSSQGNVPVNDSGIESS----EVARRPKLSVKVANTISPPQSDSA 250
S E +RR V LL ++ + S E+S + + K + V + + + DS
Sbjct: 524 STEEDRRANFVDKLLEEDSFSLTTSSSSFENSLPLVDSYVKDKDDLGVVKSNNRAKRDSY 583
Query: 251 KERLNVILKERQEKLKSSDSGKAMLSFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGK 310
E + L+ +QE K + K ML R LP ++K L+ + E VLVV GETG GK
Sbjct: 584 IEAECLSLQRKQENKKRTQKYKDMLKTRTALPISEVKNGILQHLKEKDVLVVCGETGSGK 643
Query: 311 TTQLPQFILEEELSSLRGADCNIICTQPXXXXXXXXXXXXXXERGEN---LGET-VGYQI 366
TTQ+PQFIL++ + S G CNIICTQP ER E+ L ++ VGYQ+
Sbjct: 644 TTQVPQFILDDMIDSGHGGYCNIICTQPRRIAAISVAQRVADERCESSPGLDDSLVGYQV 703
Query: 367 RLESKRSAQTRLLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFXXXXXXXXXX 426
RLES RS +TRLLFCTTG+LLR+L D L+ V+H++VDE+HER + DF
Sbjct: 704 RLESARSDKTRLLFCTTGILLRKLAGDRTLNDVTHIIVDEVHERSLLGDFLLIILKSLIE 763
Query: 427 XXXXXXXXX------MSATINADLFSKYFGNAPTVHIPGLTFPVTDLFLEDVLEKTRY 478
MSAT++ADLFS+YFG+ P + G T PVT FLE++ E Y
Sbjct: 764 KQSCDNTSRKLKVILMSATVDADLFSRYFGHCPVITAQGRTHPVTTHFLEEIYESINY 821
Score = 209 (78.6 bits), Expect = 4.8e-144, Sum P(3) = 4.8e-144
Identities = 62/187 (33%), Positives = 98/187 (52%)
Query: 872 DIGFVDKSKGPSAYNRYSHDLEMVCAILCAGLYPNVVQCKRKGKRAVF--YTKEVGQ--- 926
D+ F D ++ P +N YS E+V AILCAGLYPN+ + F TK+ Q
Sbjct: 1270 DVWFSDPTQ-P--FNMYSQQPEVVKAILCAGLYPNIAANDKGITETTFNSLTKQGNQTKS 1326
Query: 927 ----------VALHPSSVNANQNNFPLPYMVYSEMVKTNNINVYDSTNISEYALLLFGGN 976
V +HPSS+N+N F P++V+ E V+TN + + D+T +S +++LLFGG+
Sbjct: 1327 YSAWYDGRREVHIHPSSINSNFKAFQNPFLVFLEKVETNKVYLRDTTIVSPFSILLFGGS 1386
Query: 977 L-IPSKTGEGIEMLGGYLHFSASKTVLELIRKLRGELDKLLNRKIEDPRVDLSVEGKAVV 1035
+ + ++G + G+L +A L ++LR L +L I P V + VV
Sbjct: 1387 INVHHQSGS--VTIDGWLKVAAPAQTAVLFKELRLTLHSILKDLIRKPEKSGIVHNE-VV 1443
Query: 1036 SAVVELL 1042
++V LL
Sbjct: 1444 KSMVHLL 1450
Score = 45 (20.9 bits), Expect = 3.2e-101, Sum P(4) = 3.2e-101
Identities = 49/219 (22%), Positives = 86/219 (39%)
Query: 124 KLEQMKRGEEQEMIIKRKFSRADQQTLADMAHQLGLHFHAYNKGKALAVSKVPLPMYRPD 183
K ++ KRG+EQ + RK +Q ++D+ + + + A S P
Sbjct: 243 KEKRDKRGQEQAGLAIRKL----KQEISDLGLSEAMLESEFQREHAFE-SATEQESTCPI 297
Query: 184 LDERHGSTEKE---LQM----SIETERRVGNLLNSSQGN-VPVNDSG---IESSEVARRP 232
D H S + + +QM ++ T Q +P + SG + S E +
Sbjct: 298 SDNLHESVDADDVSVQMLDNLTLNTNPAESYESEEIQTKALPSSSSGQDFVASDEDSEDV 357
Query: 233 KLSVKVANTISPPQSDSAKERLNVILKERQEKLKSSDSGKAMLSFREKLPAFKMKAEFLK 292
+L I PP S E L + +E+ +L+S + + +K A K+ FL
Sbjct: 358 ELGDTFFEEI-PPSEISPHELLELQKEEKMRELRSEKNLGKLDGIWKKGEAQKIPKAFLH 416
Query: 293 AVAEN---QVLVVSGETGCGKTTQLPQFILEEELSSLRG 328
+ + + + ETG G+ IL + +S RG
Sbjct: 417 QLCQRSGWEAPKFNKETGEGRNFSYTVSILRK--ASGRG 453
Score = 37 (18.1 bits), Expect = 3.2e-101, Sum P(4) = 3.2e-101
Identities = 8/37 (21%), Positives = 17/37 (45%)
Query: 468 FLEDVLEKTRYKMNSKLDSFQGNXXXXXXQDSKKDHL 504
F++ +LE+ + + + SF+ + KD L
Sbjct: 533 FVDKLLEEDSFSLTTSSSSFENSLPLVDSYVKDKDDL 569
>UNIPROTKB|F1N1A2 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103 PROSITE:PS51194
SMART:SM00356 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 PROSITE:PS50030
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF46934
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 OMA:RAYKGWQ EMBL:DAAA02030601
EMBL:DAAA02030599 EMBL:DAAA02030600 IPI:IPI00709831
Ensembl:ENSBTAT00000019540 ArrayExpress:F1N1A2 Uniprot:F1N1A2
Length = 1382
Score = 725 (260.3 bits), Expect = 2.4e-143, Sum P(3) = 2.4e-143
Identities = 163/396 (41%), Positives = 254/396 (64%)
Query: 497 QDSKKDHLTALFEDVDIDSNYKNYRASTRASLEAWSA---EQIDLGLVESTIEYIC--RH 551
QDS KD + + +D Y+ +++ ++ S E+++L L+E+ +E+I +H
Sbjct: 779 QDSVKDAVPD--QQLDFKQLLARYQGVSKSVIKTMSVMDFEKVNLELIEALLEWIVDGKH 836
Query: 552 E---GDGAILVFLTGWNDISKLLDQIKVNKFLGD--PNKFLVLPLHGSMPTINQREIFDR 606
GAILVFL G +I L +Q++ N + N+ ++ PLH S+ + Q+ +F +
Sbjct: 837 SYPPDPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVIHPLHSSLSSEEQQAVFVK 896
Query: 607 PPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASAHQR 666
PP KI+++TNIAE+SITIDDVVYV+D GK KE YDA + L +++S+A+A QR
Sbjct: 897 PPMGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQR 956
Query: 667 RGRAGRVQPGVCYKLYP-RIIHDAMLPYQLPEILRTPLQELCLHIKSLQLGT---VGSFL 722
+GRAGRV GVC+ L+ + +L QLPEI R PL++LCL IK L++ + + S
Sbjct: 957 KGRAGRVASGVCFHLFTSHHFNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSTHNLQSVF 1016
Query: 723 SKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGKMLLMGAIFQCL 782
++ ++PP +++ + L+ +GAL E LTPLG HL +LPVD IGK++L G+IF+CL
Sbjct: 1017 ARLIEPPHADSLRASKIRLRDLGALTPDETLTPLGYHLASLPVDVRIGKLMLFGSIFRCL 1076
Query: 783 NPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAKRN--R 840
+PALTIAA+LA ++PFV P + ++E ++ K FA + SD++ALL+A+ G++ + + R
Sbjct: 1077 DPALTIAASLAFKSPFVSPWDKKEEANQKKLEFAFAN-SDYLALLRAYKGWQLSMKEGMR 1135
Query: 841 RERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFV 876
++C +NFLS LQ M ++ QF +LLSDIGFV
Sbjct: 1136 ASYNYCRQNFLSGRVLQEMASLKRQFTELLSDIGFV 1171
Score = 504 (182.5 bits), Expect = 2.4e-143, Sum P(3) = 2.4e-143
Identities = 112/278 (40%), Positives = 157/278 (56%)
Query: 261 RQEKLK-SSDSGKAMLSFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFIL 319
+Q ++K +S +++L R+ LPA++ + LK ++++QVLVVSG TGCGKTTQ+PQFIL
Sbjct: 516 KQFRIKQASRQFQSVLQERQSLPAWEERENILKLLSKHQVLVVSGMTGCGKTTQIPQFIL 575
Query: 320 EEELSSLRGADCNIICTQPXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLL 379
++ L+ NIICTQP ER E +G TVGYQIRLES +S+ TRLL
Sbjct: 576 DDSLNGPPEKVANIICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLL 635
Query: 380 FCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSAT 439
+CTTGVLLR+L D L V+H++VDE+HER DF MSAT
Sbjct: 636 YCTTGVLLRRLEGDTALQGVTHIIVDEVHERTEESDFLLLVLKDIVLQRPTLQVILMSAT 695
Query: 440 INADLFSKYFGNAPTVHIPGLTFPVTDLFLEDVLEKTRYKMNSKLDSFQGNXXXXXXQDS 499
+NA+LFS+YF + P + IPG TFPV FLED + TRY + + + +
Sbjct: 696 LNAELFSEYFNSCPVITIPGRTFPVDQFFLEDAIAVTRYVLQDG-SPYARSMKQMSKEKL 754
Query: 500 KKDHLTALFEDVDIDSNYKNYRASTRASLEAWSAEQID 537
K FE+V+ D + + +A +Q+D
Sbjct: 755 KARRSRTAFEEVEEDLRLSLHLQDQDSVKDAVPDQQLD 792
Score = 239 (89.2 bits), Expect = 2.4e-143, Sum P(3) = 2.4e-143
Identities = 53/141 (37%), Positives = 85/141 (60%)
Query: 908 VQCKRKGKRAVFYTKEVGQVALHPSSVNANQNNFPLPYMVYSEMVKTNNINVYDSTNISE 967
V+ + K F TK G V +HPSSVN +F PY+VY E +KT+ + + D + +S
Sbjct: 1239 VRMQPKSDELKFVTKNDGYVHIHPSSVNYQVRHFDSPYLVYHEKIKTSRVFIRDCSMVSV 1298
Query: 968 YALLLFGGNLIPSKTGEG---IEMLGGYLHFSA-SKTVLELIRKLRGELDKLLNRKIEDP 1023
Y L+LFGG + + +G + + G++ F+A S V EL+++LR ELD+LL KI++P
Sbjct: 1299 YPLVLFGGGQVNVQLQKGEFVVSLDDGWIRFAAASHQVAELVKELRCELDQLLQDKIKNP 1358
Query: 1024 RVDLSV--EGKAVVSAVVELL 1042
+DL G ++S +V+L+
Sbjct: 1359 SIDLCTCPRGSRIISMIVKLV 1379
Score = 87 (35.7 bits), Expect = 2.5e-127, Sum P(3) = 2.5e-127
Identities = 24/61 (39%), Positives = 34/61 (55%)
Query: 874 GFVDKSKGPSAYNRYSHDLEMVCAILCAGLYPNVVQCKR-KGKRAVFYTKEVGQVALHPS 932
G +D + G A N + + +++ A+LCA LYPNVVQ K +GK F G V + P
Sbjct: 1190 GILDAT-GEEA-NSNAENPKLISAMLCAALYPNVVQVKSPEGK---FQKTSTGAVRMQPK 1244
Query: 933 S 933
S
Sbjct: 1245 S 1245
Score = 38 (18.4 bits), Expect = 3.3e-14, Sum P(2) = 3.3e-14
Identities = 15/48 (31%), Positives = 18/48 (37%)
Query: 679 YKLYPRIIHDAMLPYQLPEILRTPLQE----LC-LHIKSLQLGTVGSF 721
Y+L R D PYQ P + E C LHI G +F
Sbjct: 345 YELEIRFSKDHKYPYQAPLVAFYSTNENLPLACRLHISEFLYGKALTF 392
Score = 37 (18.1 bits), Expect = 4.2e-14, Sum P(2) = 4.2e-14
Identities = 14/48 (29%), Positives = 23/48 (47%)
Query: 748 DDMENLTPLGRHLCTLPVDPNIGKMLLMGAIFQCLNPALTIAAALAHR 795
DD + +P GR +P D + + G + + NP T++A HR
Sbjct: 136 DDEQYWSP-GREASLVP-DSDPLECAGSGLV-EPHNPEFTVSAFAVHR 180
>UNIPROTKB|Q6P158 [details] [associations]
symbol:DHX57 "Putative ATP-dependent RNA helicase DHX57"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR009060 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00642 Pfam:PF04408 Pfam:PF05773
PROSITE:PS00690 PROSITE:PS50103 PROSITE:PS51194 SMART:SM00356
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 PROSITE:PS50030
EMBL:AC018693 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AK057423 EMBL:BC053623 EMBL:BC060778
EMBL:BC065278 EMBL:BC131534 EMBL:AF283512 IPI:IPI00168885
IPI:IPI00399364 IPI:IPI00749029 RefSeq:NP_945314.1
UniGene:Hs.468226 ProteinModelPortal:Q6P158 SMR:Q6P158
IntAct:Q6P158 STRING:Q6P158 PhosphoSite:Q6P158 DMDM:94710252
PaxDb:Q6P158 PeptideAtlas:Q6P158 PRIDE:Q6P158
Ensembl:ENST00000295373 GeneID:90957 KEGG:hsa:90957 UCSC:uc002rre.3
UCSC:uc002rrg.3 CTD:90957 GeneCards:GC02M039025 HGNC:HGNC:20086
HPA:HPA036160 neXtProt:NX_Q6P158 PharmGKB:PA134919698
HOVERGEN:HBG080658 InParanoid:Q6P158 KO:K13026 OMA:RAYKGWQ
OrthoDB:EOG4ZS929 PhylomeDB:Q6P158 ChiTaRS:DHX57 GenomeRNAi:90957
NextBio:77048 ArrayExpress:Q6P158 Bgee:Q6P158 CleanEx:HS_DHX57
Genevestigator:Q6P158 GermOnline:ENSG00000163214 Uniprot:Q6P158
Length = 1386
Score = 728 (261.3 bits), Expect = 1.7e-142, Sum P(3) = 1.7e-142
Identities = 164/391 (41%), Positives = 251/391 (64%)
Query: 497 QDSKKDHLTALFEDV-DIDSNYKNYRASTRASLEAWSAEQIDLGLVESTIEYIC--RHE- 552
QDS KD + D + + YK S ++ E+++L L+E+ +E+I +H
Sbjct: 786 QDSVKDAVPDQQLDFKQLLARYKGVSKSVIKTMSIMDFEKVNLELIEALLEWIVDGKHSY 845
Query: 553 GDGAILVFLTGWNDISKLLDQIKVNKFLGD--PNKFLVLPLHGSMPTINQREIFDRPPPN 610
GAILVFL G +I L +Q++ N + N+ ++ PLH S+ + Q+ +F +PP
Sbjct: 846 PPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVIHPLHSSLSSEEQQAVFVKPPAG 905
Query: 611 KRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRA 670
KI+++TNIAE+SITIDDVVYV+D GK KE YDA + L +++S+A+A QR+GRA
Sbjct: 906 VTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRA 965
Query: 671 GRVQPGVCYKLYPRIIHD-AMLPYQLPEILRTPLQELCLHIKSLQLGT---VGSFLSKAL 726
GRV GVC+ L+ ++ +L QLPEI R PL++LCL IK L++ + + S S+ +
Sbjct: 966 GRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSAHNLQSVFSRLI 1025
Query: 727 QPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGKMLLMGAIFQCLNPAL 786
+PP +++ + L+ +GAL E LTPLG HL +LPVD IGK++L G+IF+CL+PAL
Sbjct: 1026 EPPHTDSLRASKIRLRDLGALTPDERLTPLGYHLASLPVDVRIGKLMLFGSIFRCLDPAL 1085
Query: 787 TIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAKRN--RRERD 844
TIAA+LA ++PFV P + ++E ++ K FA + SD++ALL+A+ G++ + + R +
Sbjct: 1086 TIAASLAFKSPFVSPWDKKEEANQKKLEFAFAN-SDYLALLQAYKGWQLSTKEGVRASYN 1144
Query: 845 FCWENFLSPITLQMMEDMRSQFLDLLSDIGF 875
+C +NFLS LQ M ++ QF +LLSDIGF
Sbjct: 1145 YCRQNFLSGRVLQEMASLKRQFTELLSDIGF 1175
Score = 495 (179.3 bits), Expect = 1.7e-142, Sum P(3) = 1.7e-142
Identities = 114/292 (39%), Positives = 160/292 (54%)
Query: 246 QSDSAKERLNVILKERQEKLKSSDSGKAMLSFREKLPAFKMKAEFLKAVAENQVLVVSGE 305
Q+ S I K+ + K ++S +++L R+ LPA++ + L + ++QV+V+SG
Sbjct: 510 QAKSVHAENGKICKQFRMK-QASRQFQSILQERQSLPAWEERETILNLLRKHQVVVISGM 568
Query: 306 TGCGKTTQLPQFILEEELSSLRGADCNIICTQPXXXXXXXXXXXXXXERGENLGETVGYQ 365
TGCGKTTQ+PQFIL++ L+ NIICTQP ER E +G TVGYQ
Sbjct: 569 TGCGKTTQIPQFILDDSLNGPPEKVANIICTQPRRISAISVAERVAKERAERVGLTVGYQ 628
Query: 366 IRLESKRSAQTRLLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFXXXXXXXXX 425
IRLES +S+ TRLL+CTTGVLLR+L D L VSH++VDE+HER DF
Sbjct: 629 IRLESVKSSATRLLYCTTGVLLRRLEGDTALQGVSHIIVDEVHERTEESDFLLLVLKDIV 688
Query: 426 XXXXXXXXXXMSATINADLFSKYFGNAPTVHIPGLTFPVTDLFLEDVLEKTRYKMNSKLD 485
MSAT+NA+LFS YF + P + IPG TFPV FLED + TRY +
Sbjct: 689 SQRPGLQVILMSATLNAELFSDYFNSCPVITIPGRTFPVDQFFLEDAIAVTRYVLQDGSP 748
Query: 486 SFQGNXXXXXXQDSKKDHLTALFEDVDIDSNYKNYRASTRASLEAWSAEQID 537
+ + + + TA FE+V+ D + + +A +Q+D
Sbjct: 749 YMRSMKQISKEKLKARRNRTA-FEEVEEDLRLSLHLQDQDSVKDAVPDQQLD 799
Score = 237 (88.5 bits), Expect = 1.7e-142, Sum P(3) = 1.7e-142
Identities = 54/141 (38%), Positives = 85/141 (60%)
Query: 908 VQCKRKGKRAVFYTKEVGQVALHPSSVNANQNNFPLPYMVYSEMVKTNNINVYDSTNISE 967
V+ + K F TK G V +HPSSVN +F PY++Y E +KT+ + + D + +S
Sbjct: 1243 VRMQPKSAELKFVTKNDGYVHIHPSSVNYQVRHFDSPYLLYHEKIKTSRVFIRDCSMVSV 1302
Query: 968 YALLLFGGNLI--PSKTGEGIEMLG-GYLHF-SASKTVLELIRKLRGELDKLLNRKIEDP 1023
Y L+LFGG + + GE + L G++ F +AS V EL+++LR ELD+LL KI++P
Sbjct: 1303 YPLVLFGGGQVNVQLQRGEFVVSLDDGWIRFVAASHQVAELVKELRCELDQLLQDKIKNP 1362
Query: 1024 RVDLSV--EGKAVVSAVVELL 1042
+DL G ++S +V+L+
Sbjct: 1363 SIDLCTCPRGSRIISTIVKLV 1383
Score = 86 (35.3 bits), Expect = 1.3e-126, Sum P(3) = 1.3e-126
Identities = 24/61 (39%), Positives = 34/61 (55%)
Query: 874 GFVDKSKGPSAYNRYSHDLEMVCAILCAGLYPNVVQCKR-KGKRAVFYTKEVGQVALHPS 932
G +D + G A N + + +++ A+LCA LYPNVVQ K +GK F G V + P
Sbjct: 1194 GVLDAT-GEEA-NSNAENPKLISAMLCAALYPNVVQVKSPEGK---FQKTSTGAVRMQPK 1248
Query: 933 S 933
S
Sbjct: 1249 S 1249
Score = 38 (18.4 bits), Expect = 5.4e-14, Sum P(2) = 5.4e-14
Identities = 41/175 (23%), Positives = 68/175 (38%)
Query: 679 YKLYPRIIHDAMLPYQLPEILRTPLQE----LC-LHIKSLQLGTVGSFLSKALQPPDPLA 733
Y+L R D PYQ P + E C LHI +F + +P+
Sbjct: 353 YELEIRFSKDHKYPYQAPLVAFYSTNENLPLACRLHISEFLYDKALTFAETS----EPV- 407
Query: 734 VQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGKMLLMGAIFQCLNPALTIAAALA 793
V + I LL+ + ++ LT H + DP + L + + + NPA +
Sbjct: 408 VYSLITLLEEESEI--VKLLTNT-HHKYS---DPPVN-FLPVPSRTRINNPACH--KTVI 458
Query: 794 HRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAKRNRRERDFCWE 848
N FV N EV++A S D ++ + Y + K+ +R + W+
Sbjct: 459 PNNSFVS--NQIPEVEKASESEESDEDDGPAPVIVENESYVNLKKKISKR-YDWQ 510
>UNIPROTKB|F1M8G5 [details] [associations]
symbol:Dhx57 "Protein Dhx57" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103 PROSITE:PS51194
SMART:SM00356 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
RGD:1310340 NextBio:689608 IPI:IPI00391644
Ensembl:ENSRNOT00000037714 ArrayExpress:F1M8G5 Uniprot:F1M8G5
Length = 1338
Score = 721 (258.9 bits), Expect = 1.4e-141, Sum P(3) = 1.4e-141
Identities = 160/371 (43%), Positives = 244/371 (65%)
Query: 517 YKNYRASTRASLEAWSAEQIDLGLVESTIEYIC--RHE-GDGAILVFLTGWNDISKLLDQ 573
YK S ++ E+++L L+E+ +E+I +H GAILVFL G +I L +Q
Sbjct: 759 YKGVSKSVIKTMSVMDFEKVNLELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQ 818
Query: 574 IKVNKFLGD--PNKFLVLPLHGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVV 631
++ N + ++ ++ PLH S+ + Q+ +F +PP KI+++TNIAE+SITIDDVV
Sbjct: 819 LQSNSLFNNRRSHRCVIHPLHSSLSSEEQQAVFVKPPLGVTKIIISTNIAETSITIDDVV 878
Query: 632 YVVDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHD-AM 690
YV+D GK KE YDA + L +++S+A+A QR+GRAGRV GVC+ L+ ++ +
Sbjct: 879 YVIDSGKMKEKRYDAGKGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQL 938
Query: 691 LPYQLPEILRTPLQELCLHIKSLQLGT---VGSFLSKALQPPDPLAVQNAIELLKTIGAL 747
L QLPEI R PL++LCL IK L++ + + S S+ ++PP +++ + L+ +GAL
Sbjct: 939 LKQQLPEIQRVPLEQLCLRIKILEMFSTHNLQSVFSRLIEPPHVDSLRASKVRLRDLGAL 998
Query: 748 DDMENLTPLGRHLCTLPVDPNIGKMLLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKE 807
E LTPLG HL +LPVD IGK++L+G+IF+CL+PALTIAA+LA ++PFV P + ++E
Sbjct: 999 TPDEKLTPLGYHLASLPVDVRIGKLMLLGSIFRCLDPALTIAASLAFKSPFVSPWDKKEE 1058
Query: 808 VDEAKRSFAGDSCSDHIALLKAFDGYK-DAKRNRRER-DFCWENFLSPITLQMMEDMRSQ 865
++ K FA + SD++ALL A+ G++ K + R ++C +NFLS TLQ M ++ Q
Sbjct: 1059 ANQKKLEFAFAN-SDYLALLCAYKGWQLSTKESARASYNYCRQNFLSGRTLQEMASLKRQ 1117
Query: 866 FLDLLSDIGFV 876
F +LLSDIGFV
Sbjct: 1118 FTELLSDIGFV 1128
Score = 490 (177.5 bits), Expect = 1.4e-141, Sum P(3) = 1.4e-141
Identities = 109/255 (42%), Positives = 144/255 (56%)
Query: 261 RQEKLK-SSDSGKAMLSFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFIL 319
RQ ++K +S A+L R+ LPA++ + LK ++++QV+V+SG TGCGKTTQ+PQFIL
Sbjct: 474 RQFQMKQASRQFHAILQERQLLPAWEERETILKLLSKHQVVVISGMTGCGKTTQIPQFIL 533
Query: 320 EEELSSLRGADCNIICTQPXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLL 379
+ L+ NIICTQP ER E +G TVGYQIRLES +S+ TRLL
Sbjct: 534 DNSLNGPPERVANIICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLL 593
Query: 380 FCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSAT 439
+CTTGVLLR+L D L V+H++VDE+HER DF MSAT
Sbjct: 594 YCTTGVLLRRLEGDATLQGVTHIIVDEVHERTEESDFLLLVLKDIVMQRATLQVILMSAT 653
Query: 440 INADLFSKYFGNAPTVHIPGLTFPVTDLFLEDVLEKTRYKMNSKLDSFQGNXXXXXXQDS 499
++A LFSKYF P + IPG FPV FLED L TRY + + + +
Sbjct: 654 LDAGLFSKYFSYCPVITIPGRAFPVDQFFLEDALAVTRYVLQDG-SPYMRSMKQIAKERL 712
Query: 500 KKDHLTALFEDVDID 514
K H E+V+ D
Sbjct: 713 KARHNRTALEEVEED 727
Score = 239 (89.2 bits), Expect = 1.4e-141, Sum P(3) = 1.4e-141
Identities = 53/142 (37%), Positives = 85/142 (59%)
Query: 907 VVQCKRKGKRAVFYTKEVGQVALHPSSVNANQNNFPLPYMVYSEMVKTNNINVYDSTNIS 966
VV+ + K F TK G V +HPSSVN +F PY++Y E +KT+ + + D + +S
Sbjct: 1194 VVRLQPKSAELKFVTKNDGYVHIHPSSVNYQVRHFDSPYLLYHEKIKTSRVFIRDCSMVS 1253
Query: 967 EYALLLFGGNLIPSKTGEG---IEMLGGYLHF-SASKTVLELIRKLRGELDKLLNRKIED 1022
Y L+LFGG + + G + + G++ F +AS V EL+++LR ELD+LL KI++
Sbjct: 1254 VYPLVLFGGGQVSVQLQRGAFVVSLDDGWIRFVAASHQVAELVKELRCELDQLLQDKIKN 1313
Query: 1023 PRVDLSV--EGKAVVSAVVELL 1042
P +DL G ++S +V+L+
Sbjct: 1314 PSMDLCTCPRGSRIISMIVKLI 1335
Score = 87 (35.7 bits), Expect = 1.4e-125, Sum P(3) = 1.4e-125
Identities = 25/61 (40%), Positives = 34/61 (55%)
Query: 874 GFVDKSKGPSAYNRYSHDLEMVCAILCAGLYPNVVQCKR-KGKRAVFYTKEVGQVALHPS 932
G +D + G A N + + +++ A+LCA LYPNVVQ K +GK F G V L P
Sbjct: 1146 GVLDAT-GEEA-NTNAENPKLISAVLCAALYPNVVQVKTPEGK---FQKTSSGVVRLQPK 1200
Query: 933 S 933
S
Sbjct: 1201 S 1201
Score = 42 (19.8 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 17/55 (30%), Positives = 21/55 (38%)
Query: 679 YKLYPRIIHDAMLPYQLPEILRTPLQE----LC-LHIKSLQLGTVGSFLSKALQP 728
Y+L R D PYQ P + E C LHI G F +K +P
Sbjct: 303 YELQIRFSKDHKYPYQAPLVAFYSTNENLPLACRLHISEFLYGKALEF-AKTSEP 356
>UNIPROTKB|F1LSC4 [details] [associations]
symbol:Dhx57 "Protein Dhx57" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103 PROSITE:PS51194
SMART:SM00356 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:90957 KO:K13026 OMA:RAYKGWQ
IPI:IPI00369334 RefSeq:NP_001178836.1 UniGene:Rn.15951
Ensembl:ENSRNOT00000037705 GeneID:366532 KEGG:rno:366532
RGD:1310340 NextBio:689608 ArrayExpress:F1LSC4 Uniprot:F1LSC4
Length = 1391
Score = 721 (258.9 bits), Expect = 2.1e-141, Sum P(3) = 2.1e-141
Identities = 160/371 (43%), Positives = 244/371 (65%)
Query: 517 YKNYRASTRASLEAWSAEQIDLGLVESTIEYIC--RHE-GDGAILVFLTGWNDISKLLDQ 573
YK S ++ E+++L L+E+ +E+I +H GAILVFL G +I L +Q
Sbjct: 812 YKGVSKSVIKTMSVMDFEKVNLELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQ 871
Query: 574 IKVNKFLGD--PNKFLVLPLHGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVV 631
++ N + ++ ++ PLH S+ + Q+ +F +PP KI+++TNIAE+SITIDDVV
Sbjct: 872 LQSNSLFNNRRSHRCVIHPLHSSLSSEEQQAVFVKPPLGVTKIIISTNIAETSITIDDVV 931
Query: 632 YVVDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHD-AM 690
YV+D GK KE YDA + L +++S+A+A QR+GRAGRV GVC+ L+ ++ +
Sbjct: 932 YVIDSGKMKEKRYDAGKGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQL 991
Query: 691 LPYQLPEILRTPLQELCLHIKSLQLGT---VGSFLSKALQPPDPLAVQNAIELLKTIGAL 747
L QLPEI R PL++LCL IK L++ + + S S+ ++PP +++ + L+ +GAL
Sbjct: 992 LKQQLPEIQRVPLEQLCLRIKILEMFSTHNLQSVFSRLIEPPHVDSLRASKVRLRDLGAL 1051
Query: 748 DDMENLTPLGRHLCTLPVDPNIGKMLLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKE 807
E LTPLG HL +LPVD IGK++L+G+IF+CL+PALTIAA+LA ++PFV P + ++E
Sbjct: 1052 TPDEKLTPLGYHLASLPVDVRIGKLMLLGSIFRCLDPALTIAASLAFKSPFVSPWDKKEE 1111
Query: 808 VDEAKRSFAGDSCSDHIALLKAFDGYK-DAKRNRRER-DFCWENFLSPITLQMMEDMRSQ 865
++ K FA + SD++ALL A+ G++ K + R ++C +NFLS TLQ M ++ Q
Sbjct: 1112 ANQKKLEFAFAN-SDYLALLCAYKGWQLSTKESARASYNYCRQNFLSGRTLQEMASLKRQ 1170
Query: 866 FLDLLSDIGFV 876
F +LLSDIGFV
Sbjct: 1171 FTELLSDIGFV 1181
Score = 490 (177.5 bits), Expect = 2.1e-141, Sum P(3) = 2.1e-141
Identities = 109/255 (42%), Positives = 144/255 (56%)
Query: 261 RQEKLK-SSDSGKAMLSFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFIL 319
RQ ++K +S A+L R+ LPA++ + LK ++++QV+V+SG TGCGKTTQ+PQFIL
Sbjct: 527 RQFQMKQASRQFHAILQERQLLPAWEERETILKLLSKHQVVVISGMTGCGKTTQIPQFIL 586
Query: 320 EEELSSLRGADCNIICTQPXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLL 379
+ L+ NIICTQP ER E +G TVGYQIRLES +S+ TRLL
Sbjct: 587 DNSLNGPPERVANIICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLL 646
Query: 380 FCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSAT 439
+CTTGVLLR+L D L V+H++VDE+HER DF MSAT
Sbjct: 647 YCTTGVLLRRLEGDATLQGVTHIIVDEVHERTEESDFLLLVLKDIVMQRATLQVILMSAT 706
Query: 440 INADLFSKYFGNAPTVHIPGLTFPVTDLFLEDVLEKTRYKMNSKLDSFQGNXXXXXXQDS 499
++A LFSKYF P + IPG FPV FLED L TRY + + + +
Sbjct: 707 LDAGLFSKYFSYCPVITIPGRAFPVDQFFLEDALAVTRYVLQDG-SPYMRSMKQIAKERL 765
Query: 500 KKDHLTALFEDVDID 514
K H E+V+ D
Sbjct: 766 KARHNRTALEEVEED 780
Score = 239 (89.2 bits), Expect = 2.1e-141, Sum P(3) = 2.1e-141
Identities = 53/142 (37%), Positives = 85/142 (59%)
Query: 907 VVQCKRKGKRAVFYTKEVGQVALHPSSVNANQNNFPLPYMVYSEMVKTNNINVYDSTNIS 966
VV+ + K F TK G V +HPSSVN +F PY++Y E +KT+ + + D + +S
Sbjct: 1247 VVRLQPKSAELKFVTKNDGYVHIHPSSVNYQVRHFDSPYLLYHEKIKTSRVFIRDCSMVS 1306
Query: 967 EYALLLFGGNLIPSKTGEG---IEMLGGYLHF-SASKTVLELIRKLRGELDKLLNRKIED 1022
Y L+LFGG + + G + + G++ F +AS V EL+++LR ELD+LL KI++
Sbjct: 1307 VYPLVLFGGGQVSVQLQRGAFVVSLDDGWIRFVAASHQVAELVKELRCELDQLLQDKIKN 1366
Query: 1023 PRVDLSV--EGKAVVSAVVELL 1042
P +DL G ++S +V+L+
Sbjct: 1367 PSMDLCTCPRGSRIISMIVKLI 1388
Score = 87 (35.7 bits), Expect = 2.1e-125, Sum P(3) = 2.1e-125
Identities = 25/61 (40%), Positives = 34/61 (55%)
Query: 874 GFVDKSKGPSAYNRYSHDLEMVCAILCAGLYPNVVQCKR-KGKRAVFYTKEVGQVALHPS 932
G +D + G A N + + +++ A+LCA LYPNVVQ K +GK F G V L P
Sbjct: 1199 GVLDAT-GEEA-NTNAENPKLISAVLCAALYPNVVQVKTPEGK---FQKTSSGVVRLQPK 1253
Query: 933 S 933
S
Sbjct: 1254 S 1254
Score = 42 (19.8 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 17/55 (30%), Positives = 21/55 (38%)
Query: 679 YKLYPRIIHDAMLPYQLPEILRTPLQE----LC-LHIKSLQLGTVGSFLSKALQP 728
Y+L R D PYQ P + E C LHI G F +K +P
Sbjct: 356 YELQIRFSKDHKYPYQAPLVAFYSTNENLPLACRLHISEFLYGKALEF-AKTSEP 409
>MGI|MGI:2147067 [details] [associations]
symbol:Dhx57 "DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 SMART:SM00847
MGI:MGI:2147067 GO:GO:0005524 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF46934
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:90957 HOVERGEN:HBG080658 KO:K13026
OMA:RAYKGWQ OrthoDB:EOG4ZS929 EMBL:AK035344 EMBL:AK053628
EMBL:AK162192 EMBL:BC026474 EMBL:BC062952 EMBL:BC065169
EMBL:BC066091 IPI:IPI00420351 IPI:IPI00453609 IPI:IPI00752611
IPI:IPI00753147 IPI:IPI00755243 RefSeq:NP_001157231.1
RefSeq:NP_945180.2 UniGene:Mm.12412 ProteinModelPortal:Q6P5D3
SMR:Q6P5D3 PhosphoSite:Q6P5D3 PaxDb:Q6P5D3 PRIDE:Q6P5D3
Ensembl:ENSMUST00000038166 Ensembl:ENSMUST00000086555 GeneID:106794
KEGG:mmu:106794 UCSC:uc008dqx.2 UCSC:uc008dqy.2 UCSC:uc008dqz.2
UCSC:uc008dra.2 UCSC:uc008drb.1 InParanoid:Q6P5D3 NextBio:358388
Bgee:Q6P5D3 CleanEx:MM_DHX57 Genevestigator:Q6P5D3
GermOnline:ENSMUSG00000035051 Uniprot:Q6P5D3
Length = 1388
Score = 719 (258.2 bits), Expect = 1.1e-140, Sum P(3) = 1.1e-140
Identities = 159/371 (42%), Positives = 244/371 (65%)
Query: 517 YKNYRASTRASLEAWSAEQIDLGLVESTIEYIC--RHE-GDGAILVFLTGWNDISKLLDQ 573
YK S ++ E+++L L+E+ +E+I +H GA+LVFL G +I L +Q
Sbjct: 809 YKGVSKSVIKTMSVMDFEKVNLELIEALLEWIVDGKHAYPPGAVLVFLPGLAEIKMLYEQ 868
Query: 574 IKVNKFLGD--PNKFLVLPLHGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVV 631
++ N + ++ ++ PLH S+ + Q+ +F +PP KI+++TNIAE+SITIDDVV
Sbjct: 869 LQSNSLFNNRRSHRCVIHPLHSSLSSEEQQAVFVKPPMGVTKIIISTNIAETSITIDDVV 928
Query: 632 YVVDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHD-AM 690
YV+D GK KE YDA + L +++S+A+A QR+GRAGRV GVC+ L+ ++ +
Sbjct: 929 YVIDSGKMKEKRYDAGKGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQL 988
Query: 691 LPYQLPEILRTPLQELCLHIKSLQLGT---VGSFLSKALQPPDPLAVQNAIELLKTIGAL 747
L QLPEI R PL++LCL IK L++ + + S S+ ++PP +++ + L+ +GAL
Sbjct: 989 LKQQLPEIQRVPLEQLCLRIKILEMFSTHNLQSVFSRLIEPPHIDSLRASKVRLRDLGAL 1048
Query: 748 DDMENLTPLGRHLCTLPVDPNIGKMLLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKE 807
E LTPLG HL +LPVD IGK++L+G+IF+CL+PALTIAA+LA ++PFV P + ++E
Sbjct: 1049 TPDEKLTPLGYHLASLPVDVRIGKLMLLGSIFRCLDPALTIAASLAFKSPFVSPWDKKEE 1108
Query: 808 VDEAKRSFAGDSCSDHIALLKAFDGYK-DAKRNRRER-DFCWENFLSPITLQMMEDMRSQ 865
++ K FA + SD++ALL A+ G++ K + R ++C +NFLS TLQ M ++ Q
Sbjct: 1109 ANQKKLEFAFAN-SDYLALLCAYKGWQLSTKESARASYNYCRQNFLSGRTLQEMASLKRQ 1167
Query: 866 FLDLLSDIGFV 876
F +LLSDIGFV
Sbjct: 1168 FTELLSDIGFV 1178
Score = 488 (176.8 bits), Expect = 1.1e-140, Sum P(3) = 1.1e-140
Identities = 109/255 (42%), Positives = 144/255 (56%)
Query: 261 RQEKLK-SSDSGKAMLSFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFIL 319
RQ ++K +S A+L R+ LPA++ + LK ++++QV+V+SG TGCGKTTQ+PQFIL
Sbjct: 524 RQFQMKQASRQFHAILQERQLLPAWEERETILKLLSKHQVVVISGMTGCGKTTQIPQFIL 583
Query: 320 EEELSSLRGADCNIICTQPXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLL 379
+ L+ NIICTQP ER E +G TVGYQIRLES +S+ TRLL
Sbjct: 584 DNSLNGPPERVANIICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLL 643
Query: 380 FCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSAT 439
+CTTGVLLR+L D L V+H++VDE+HER DF MSAT
Sbjct: 644 YCTTGVLLRRLEGDATLQGVTHIIVDEVHERTEESDFLLLVLKDIVMQRATLQVILMSAT 703
Query: 440 INADLFSKYFGNAPTVHIPGLTFPVTDLFLEDVLEKTRYKMNSKLDSFQGNXXXXXXQDS 499
++A LFSKYF P + IPG FPV FLED L TRY + + + +
Sbjct: 704 LDAGLFSKYFSYCPVITIPGRAFPVDQFFLEDALAVTRYVLQDG-SPYMRSMKQIAKEKL 762
Query: 500 KKDHLTALFEDVDID 514
K H E+V+ D
Sbjct: 763 KARHNRTAQEEVEED 777
Score = 236 (88.1 bits), Expect = 1.1e-140, Sum P(3) = 1.1e-140
Identities = 53/142 (37%), Positives = 85/142 (59%)
Query: 907 VVQCKRKGKRAVFYTKEVGQVALHPSSVNANQNNFPLPYMVYSEMVKTNNINVYDSTNIS 966
VV+ + K F TK G V +HPSSVN +F PY++Y E +KT+ + + D + +S
Sbjct: 1244 VVRLQPKSAELKFVTKNDGYVHIHPSSVNYQVRHFDSPYLLYHEKIKTSRVFIRDCSMVS 1303
Query: 967 EYALLLFGGNLIPSKTGEG---IEMLGGYLHF-SASKTVLELIRKLRGELDKLLNRKIED 1022
Y L+LFGG + + G + + G++ F +AS V EL+++LR ELD+LL KI++
Sbjct: 1304 VYPLVLFGGGQVNVQLQRGAFVVSLDDGWIRFVAASHQVAELVKELRCELDQLLQDKIKN 1363
Query: 1023 PRVDLSV--EGKAVVSAVVELL 1042
P +DL G ++S +V+L+
Sbjct: 1364 PSMDLCSCPRGSRIISMIVKLI 1385
Score = 87 (35.7 bits), Expect = 5.6e-125, Sum P(3) = 5.6e-125
Identities = 25/61 (40%), Positives = 34/61 (55%)
Query: 874 GFVDKSKGPSAYNRYSHDLEMVCAILCAGLYPNVVQCKR-KGKRAVFYTKEVGQVALHPS 932
G +D + G A N + + +++ A+LCA LYPNVVQ K +GK F G V L P
Sbjct: 1196 GVLDAT-GEEA-NTNAENPKLISAVLCAALYPNVVQVKTPEGK---FQKTSSGVVRLQPK 1250
Query: 933 S 933
S
Sbjct: 1251 S 1251
Score = 42 (19.8 bits), Expect = 2.7e-14, Sum P(2) = 2.7e-14
Identities = 17/55 (30%), Positives = 21/55 (38%)
Query: 679 YKLYPRIIHDAMLPYQLPEILRTPLQE----LC-LHIKSLQLGTVGSFLSKALQP 728
Y+L R D PYQ P + E C LHI G F +K +P
Sbjct: 353 YELQIRFSKDHKYPYQAPLVAFYSTNENLPLACRLHISEFLYGKALEF-AKTSEP 406
>ZFIN|ZDB-GENE-050419-20 [details] [associations]
symbol:si:dkey-119o24.1 "si:dkey-119o24.1"
species:7955 "Danio rerio" [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 ZFIN:ZDB-GENE-050419-20 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000247063 GeneTree:ENSGT00550000074257
HOVERGEN:HBG081438 KO:K14442 OrthoDB:EOG4K6G3J OMA:GRIAYND
EMBL:BX908763 EMBL:BX927166 IPI:IPI00633899 RefSeq:NP_001122016.1
UniGene:Dr.130296 Ensembl:ENSDART00000109467 GeneID:569072
KEGG:dre:569072 InParanoid:A3KQN8 NextBio:20889491 Uniprot:A3KQN8
Length = 1037
Score = 1369 (487.0 bits), Expect = 6.3e-140, P = 6.3e-140
Identities = 303/716 (42%), Positives = 437/716 (61%)
Query: 359 GETVGYQIRLESKRSA-QTRLLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFX 417
G++ GYQIRL+S+ Q LL+CTTGV+L+ L DP LS ++HL++DEIHER + D
Sbjct: 300 GKSCGYQIRLQSRLPRKQGSLLYCTTGVILQWLHSDPYLSSITHLVLDEIHERSVQSDIL 359
Query: 418 XXXXXXXXXXXXXXXXXXMSATINADLFSKYFGNAPTVHIPGLTFPVTDLFLEDVLE--- 474
MSAT+NA+ FSKYF N P +HIPG TFPVT+ LEDV+E
Sbjct: 360 ITIVKDLLTARDDLKVVLMSATLNAEKFSKYFNNCPMIHIPGYTFPVTEYLLEDVVELLG 419
Query: 475 -KTRYKMNSKLDSFQGNXXXXXXQDSKKDHLTALF-EDVDIDSNYKNYRASTRASLEAWS 532
+ RYK + N + K + A + E + R S ++E
Sbjct: 420 FQPRYKQRKPHYRKRNNHGSSARPEKGK--IEAKYHESWPCYARTLRDRFSD-TTIEVLG 476
Query: 533 A----EQIDLGLVESTIEYICRHEGDGAILVFLTGWNDISKLLDQIKVNK-FLGDPNKFL 587
+ IDL L + I +I +E +GAILVFL GW++IS L D + ++ F +F+
Sbjct: 477 MMDDDDNIDLELTAALIRHIAVNENEGAILVFLPGWDNISTLNDLLMSDQMFKSGRYRFI 536
Query: 588 VLPLHGSMPTINQREI-------FDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAK 640
++PLH MPT++Q ++ F +PPP RKIV+ATNIAE+SITIDDVVYV+D GK K
Sbjct: 537 IIPLHSLMPTVSQTQVISLFPQVFKKPPPGVRKIVIATNIAETSITIDDVVYVIDGGKIK 596
Query: 641 ETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQLPEILR 700
ET +D N + + W+S A+A QR+GRAGRV PG CY LY + + YQLPEI R
Sbjct: 597 ETHFDTQNNIRTMTAEWVSIANAKQRKGRAGRVSPGKCYHLYNGLRASLLDNYQLPEIQR 656
Query: 701 TPLQELCLHIKSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHL 760
TPL+ELCL IK L+LG + +FL K + PP A++ AI L + ALD E LTPLG HL
Sbjct: 657 TPLEELCLQIKVLKLGPIATFLQKTMDPPSDRAIELAITHLVDLNALDRDEKLTPLGFHL 716
Query: 761 CTLPVDPNIGKMLLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSC 820
+PV+P+IGKM+L GA+ CL+P LTIAA+L+ ++PF +P+ +K D+ ++ F+ +S
Sbjct: 717 ARMPVEPHIGKMILFGALLGCLDPVLTIAASLSFKDPFFIPLGKEKIADQRRKMFSQNSR 776
Query: 821 SDHIALLKAFDGYKDAKR--NRRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDK 878
SDH++++ AF G++DAKR +R ER++CW+NFLS TLQM+++M+ QF + L GFV+
Sbjct: 777 SDHLSIVNAFLGWEDAKRQGSRFEREYCWDNFLSANTLQMLQNMKGQFAEHLLRAGFVNS 836
Query: 879 S--KGPSAYNRYSHDLEMVCAILCAGLYPNVVQC-----KRKGKRAVFYTKEVGQVALHP 931
K PS+ N S + ++V A++ AGLYP V + K++ YTK G+V +HP
Sbjct: 837 KDPKDPSS-NINSENKKLVKAVIVAGLYPKVAKISPSHNKKRPMPVKVYTKADGKVCIHP 895
Query: 932 SSVNANQNNFPLPYMVYSEMVKTNNINVYDSTNISEYALLLFGGNL-IPSKTGEGIEMLG 990
SVNA + F ++VY +KT +I +YD T +S ++LL FGGN+ I + +
Sbjct: 896 KSVNAEETQFQYKWLVYHLKMKTTSIFLYDCTEVSPFSLLFFGGNISIQRDQDQDTIAVD 955
Query: 991 GYLHFSASKTVLELIRKLRGELDKLLNRKIEDPR-VDLS-VEGK--AVVSAVVELL 1042
++ F + + L++ L+ ELD LL KI+ P VD + K AV+SA+++L+
Sbjct: 956 EWIVFQSPGRIAHLVKDLKKELDVLLEEKIKSPHPVDWKDQQSKDCAVISAIIDLI 1011
Score = 611 (220.1 bits), Expect = 1.2e-56, P = 1.2e-56
Identities = 140/364 (38%), Positives = 206/364 (56%)
Query: 258 LKERQEKLKSSDSGKAMLSFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQF 317
LK+ Q+K + + + ML FR+KLP++ M+ E ++ ++ N+VLV+SGETGCGKTTQ+ QF
Sbjct: 197 LKKDQQKKEDNAAYIEMLKFRKKLPSYGMREELVRLISANRVLVISGETGCGKTTQVTQF 256
Query: 318 ILEEELSSLRGADCNIICTQPXXXXXXXXXXXXXXERGENLGE--TVGYQIRLESKRSA- 374
IL++ + +G+ C ++CTQP ER E +GE + GYQIRL+S+
Sbjct: 257 ILDDFIQRGQGSLCRVVCTQPRRISAISVAERVAVERAEPVGEGKSCGYQIRLQSRLPRK 316
Query: 375 QTRLLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXX 434
Q LL+CTTGV+L+ L DP LS ++HL++DEIHER + D
Sbjct: 317 QGSLLYCTTGVILQWLHSDPYLSSITHLVLDEIHERSVQSDILITIVKDLLTARDDLKVV 376
Query: 435 XMSATINADLFSKYFGNAPTVHIPGLTFPVTDLFLEDVLE----KTRYKMNSKLDSFQGN 490
MSAT+NA+ FSKYF N P +HIPG TFPVT+ LEDV+E + RYK + N
Sbjct: 377 LMSATLNAEKFSKYFNNCPMIHIPGYTFPVTEYLLEDVVELLGFQPRYKQRKPHYRKRNN 436
Query: 491 XXXXXXQDSKKDHLTALF-EDVDIDSNYKNYRASTRASLEAWSA----EQIDLGLVESTI 545
+ K + A + E + R S ++E + IDL L + I
Sbjct: 437 HGSSARPEKGK--IEAKYHESWPCYARTLRDRFSD-TTIEVLGMMDDDDNIDLELTAALI 493
Query: 546 EYICRHEGDGAILVFLTGWNDISKLLDQIKVNK-FLGDPNKFLVLPLHGSMPTINQREIF 604
+I +E +GAILVFL GW++IS L D + ++ F +F+++PLH MPT++Q ++
Sbjct: 494 RHIAVNENEGAILVFLPGWDNISTLNDLLMSDQMFKSGRYRFIIIPLHSLMPTVSQTQVI 553
Query: 605 DRPP 608
P
Sbjct: 554 SLFP 557
>UNIPROTKB|E1C9G0 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00642 Pfam:PF04408 Pfam:PF05773
PROSITE:PS50103 PROSITE:PS51194 SMART:SM00356 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00550000074257 OMA:RAYKGWQ
EMBL:AADN02041257 EMBL:AADN02041258 EMBL:AADN02041259
EMBL:AADN02041260 IPI:IPI00679513 Ensembl:ENSGALT00000023376
Uniprot:E1C9G0
Length = 1380
Score = 704 (252.9 bits), Expect = 1.3e-139, Sum P(4) = 1.3e-139
Identities = 158/388 (40%), Positives = 251/388 (64%)
Query: 500 KKDHLTALFEDVDIDSNYKNYRASTRASLEAWSAEQIDLGLVESTIEYIC--RHE-GDGA 556
+K +LT LF + S T + ++ ++++L L+E+ +E+I +H GA
Sbjct: 788 QKMNLTVLF--LSFSSGVNKTVLKTMSVMDL---DKVNLELIEALLEWIVDGKHSYPPGA 842
Query: 557 ILVFLTGWNDISKLLDQIKVNKFLGDPN--KFLVLPLHGSMPTINQREIFDRPPPNKRKI 614
+L+FL G +I L +Q++ N + + + +V PLH S+ + Q+ +F RPP KI
Sbjct: 843 VLIFLPGLAEIKMLYEQLQSNALFNNRHSKRCVVYPLHSSLSSEEQQSVFLRPPAGVIKI 902
Query: 615 VLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQ 674
+++TNIAE+S+TIDDVVYV+D GK KE YD + L +++S+A+A QR+GRAGRV
Sbjct: 903 IISTNIAETSVTIDDVVYVIDSGKMKEKRYDPSKGMESLEDTFVSRANALQRKGRAGRVA 962
Query: 675 PGVCYKLYPRIIHD-AMLPYQLPEILRTPLQELCLHIKSLQL---GTVGSFLSKALQPPD 730
GVC+ L+ ++ ++ QLPEI R PL++LCL IK L++ ++ S LS+ ++PP
Sbjct: 963 SGVCFHLFSSHHYNHQLIKQQLPEIQRVPLEQLCLRIKILEMFSAQSLHSVLSRLIEPPR 1022
Query: 731 PLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGKMLLMGAIFQCLNPALTIAA 790
+++ + L+ +GAL E LTPLG HL +LPVD IGK++L G IF+CL+PALTIAA
Sbjct: 1023 TESLRASKLRLQDLGALTADEKLTPLGYHLASLPVDVRIGKLMLFGTIFRCLDPALTIAA 1082
Query: 791 ALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAKR--NRRERDFCWE 848
+LA ++PFV P + ++E ++ K FA + SD++ALL+A+ G++ + + ++ ++C E
Sbjct: 1083 SLAFKSPFVSPWDKREEANKKKLDFAVGN-SDYLALLQAYKGWRLSTKEGSQASYNYCRE 1141
Query: 849 NFLSPITLQMMEDMRSQFLDLLSDIGFV 876
NFLS LQ + ++ QF +LLSDIGFV
Sbjct: 1142 NFLSGRVLQEIASLKRQFTELLSDIGFV 1169
Score = 515 (186.3 bits), Expect = 1.3e-139, Sum P(4) = 1.3e-139
Identities = 119/302 (39%), Positives = 162/302 (53%)
Query: 234 LSVKVANTISPPQSDSAKERLNVILKERQEKLKSSDSGKAMLSFREKLPAFKMKAEFLKA 293
L K++ + E + + ++ R +K SS ++ML R+KLPA++ + L
Sbjct: 492 LKKKLSRKYDVHSKSTYNENVKICMQFRLKK--SSRRFQSMLHERQKLPAWQERETILDL 549
Query: 294 VAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQPXXXXXXXXXXXXXXE 353
+ +QVLVVSG TGCGKTTQ+PQFIL+ L A NIICTQP E
Sbjct: 550 LTSHQVLVVSGMTGCGKTTQIPQFILDASLQGSPNAVANIICTQPRRISAISVAERVAKE 609
Query: 354 RGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMN 413
R E +G TVGYQIRLES +S+ TRLL+CTTGVLLR+L D L ++H++VDE+HER
Sbjct: 610 RTERVGVTVGYQIRLESVKSSATRLLYCTTGVLLRRLEGDLTLQGITHVIVDEVHERTEE 669
Query: 414 EDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGNAPTVHIPGLTFPVTDLFLEDVL 473
DF MSAT+NA+LFS+YF + P ++IPG TFPV FLEDV+
Sbjct: 670 SDFLLLVLKDIMVQRPDLRIILMSATLNAELFSQYFHSCPIINIPGRTFPVDQFFLEDVI 729
Query: 474 EKTRYKMNSKLDSFQGNXXXXXXQDSKKDHLTALFEDVDIDSNYKNYRASTRASLEAWSA 533
TRY + DS H FE+V+ D + T +++
Sbjct: 730 AMTRYVLE---DSSPYRRKTKQENKVTARHKRTAFEEVEEDLRHAGLLEDTDTAVKDSDP 786
Query: 534 EQ 535
+Q
Sbjct: 787 DQ 788
Score = 233 (87.1 bits), Expect = 1.3e-139, Sum P(4) = 1.3e-139
Identities = 52/141 (36%), Positives = 85/141 (60%)
Query: 908 VQCKRKGKRAVFYTKEVGQVALHPSSVNANQNNFPLPYMVYSEMVKTNNINVYDSTNISE 967
V+ + K + F TK G V +HPSSVN +F PY+VY E +KT+ + + D + +S
Sbjct: 1237 VKMQPKAEELKFVTKNDGYVHIHPSSVNYQTRHFESPYLVYHEKIKTSRVFIRDCSMVSV 1296
Query: 968 YALLLFGGNLIPSKTGEG---IEMLGGYLHF-SASKTVLELIRKLRGELDKLLNRKIEDP 1023
Y L+L GG + + +G I + G++ F +AS V EL+++LR ELD+LL KI++P
Sbjct: 1297 YPLVLLGGGQVHMQLQKGEFVISLDDGWIRFVAASHQVAELVKELRCELDQLLQDKIKNP 1356
Query: 1024 RVDLSV--EGKAVVSAVVELL 1042
+DL + G ++ +V+L+
Sbjct: 1357 SMDLCMCPRGSRIIGMIVKLV 1377
Score = 86 (35.3 bits), Expect = 3.6e-124, Sum P(4) = 3.6e-124
Identities = 22/61 (36%), Positives = 35/61 (57%)
Query: 874 GFVDKSKGPSAYNRYSHDLEMVCAILCAGLYPNVVQCKR-KGKRAVFYTKEVGQVALHPS 932
G +D + G A N + + +++ A+LCA LYPNVVQ K+ +GK + G V + P
Sbjct: 1188 GVLDAT-GEEA-NSNAENFKLISAMLCAALYPNVVQVKKPEGK---YQKTSTGAVKMQPK 1242
Query: 933 S 933
+
Sbjct: 1243 A 1243
Score = 46 (21.3 bits), Expect = 1.3e-139, Sum P(4) = 1.3e-139
Identities = 13/35 (37%), Positives = 17/35 (48%)
Query: 195 LQMSIETERRVGNLLNSSQGN--VPVNDSGIESSE 227
+ M+ E +RRV LL QG P +D S E
Sbjct: 103 IHMTTENQRRVKELLRELQGQDLAPESDRVAGSGE 137
Score = 39 (18.8 bits), Expect = 4.4e-88, Sum P(3) = 4.4e-88
Identities = 24/94 (25%), Positives = 38/94 (40%)
Query: 195 LQMSIETERRVGNLLNSSQGNVPVNDSGIESSEVARRPKLSVKVANTISPPQSDSA-KER 253
L S+E E +G LL ++ S +S A RP VK+ S + K++
Sbjct: 409 LVTSLEDESEIGELLENTHHKY----SAPPASHPAARP---VKLHPFSSHHYNHQLIKQQ 461
Query: 254 LNVILKERQEKLKSSDSGKAMLSFREKLPAFKMK 287
L I KE + + D + ++ E K K
Sbjct: 462 LPEIQKEEVAEEEEEDEPQQVIVENESYVNLKKK 495
>FB|FBgn0032883 [details] [associations]
symbol:CG9323 species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0002151 "G-quadruplex RNA binding"
evidence=IDA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:AE014134 GO:GO:0002151
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
GeneTree:ENSGT00550000074257 KO:K14442 EMBL:AY095176
RefSeq:NP_610056.1 UniGene:Dm.11353 SMR:Q8SWT2 MINT:MINT-935813
EnsemblMetazoa:FBtr0081459 GeneID:35339 KEGG:dme:Dmel_CG9323
UCSC:CG9323-RA FlyBase:FBgn0032883 InParanoid:Q8SWT2 OMA:PLGMHLA
OrthoDB:EOG4HQC07 GenomeRNAi:35339 NextBio:793041 Uniprot:Q8SWT2
Length = 942
Score = 1341 (477.1 bits), Expect = 5.8e-137, P = 5.8e-137
Identities = 308/808 (38%), Positives = 463/808 (57%)
Query: 252 ERLNVILKERQEKLKSSDSGKAMLSFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKT 311
ERL + L +RQ + ++ K L R+KLP K + ++AV ENQV+++ G TGCGKT
Sbjct: 128 ERLQLELGQRQLE----ENAKKRLEARKKLPTMKYADDIIQAVRENQVILIVGSTGCGKT 183
Query: 312 TQLPQFILEEELSSLRGADCNIICTQPXXXXXXXXXXXXXXERGENLGETVGYQIRLESK 371
TQ+PQ +L++ +S + C IICTQP ER E+LG +VGYQIRLES+
Sbjct: 184 TQVPQILLDDAISRGCASSCRIICTQPRRISAIAIAEWVSYERCESLGNSVGYQIRLESR 243
Query: 372 RSAQ-TRLLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXX 430
++ + + +CTTGVLL+QL DP + +S L++DEIHER + D
Sbjct: 244 KARERASITYCTTGVLLQQLQSDPLMHNLSVLILDEIHERSVETDLLMGLLKVILPHRPD 303
Query: 431 XXXXXMSATINADLFSKYFGNAPTVHIPGLTFPVTDLFLEDVLEKTRYKMNSKLDSFQGN 490
MSAT+ F YF N P I G+ FPV L+LEDVL KT Y+ F+
Sbjct: 304 LKVILMSATVREQDFCDYFNNCPMFRIEGVMFPVKMLYLEDVLSKTNYEFQK----FRDR 359
Query: 491 XXXXXXQDSKKDHLTALFEDV--DIDSNYKNYRASTRASL-EAWSAEQIDLGLVESTIEY 547
+ + H A+ E I ++Y + R + L E+ E ID + + Y
Sbjct: 360 RPKRDPPERRMKH-EAMIEPYLRRIRNSYDS-RVLDKLRLPESEGCEDIDF--IADLVYY 415
Query: 548 ICRHEGDGAILVFLTGWNDISKL---LDQIKVNKFLGDPNKFLVLPLHGSMPTINQREIF 604
IC +E +GAILVFL G++ IS+L LD+ K +K + V PLH M + Q+ +F
Sbjct: 416 ICENEPEGAILVFLPGYDKISQLYNILDKPKTSKGQRWRDHMAVFPLHSLMQSGEQQAVF 475
Query: 605 DRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASAH 664
RPP +RK++++T IAE+S+TIDDVVYV++ G+ K T+YD + L W++KA+
Sbjct: 476 RRPPAGQRKVIISTIIAETSVTIDDVVYVINSGRTKATNYDIETNIQSLDEVWVTKANTQ 535
Query: 665 QRRGRAGRVQPGVCYKLYPRIIHDAMLPYQLPEILRTPLQELCLHIKSLQLGTVGSFLSK 724
QRRGRAGRV+PG+CY L+ R D M PEILR+ L+ + L +K L + FL
Sbjct: 536 QRRGRAGRVRPGICYNLFSRAREDRMDDIPTPEILRSKLESIILSLKLLHIDDPYRFLQT 595
Query: 725 ALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGKMLLMGAIFQCLNP 784
+ P+P A++ +ELLK I ALD LTPLG HL LP+DP +GKM+LM A+F CL+P
Sbjct: 596 LINAPNPEAIKMGVELLKRIEALDQTGTLTPLGMHLAKLPIDPQMGKMILMSALFCCLDP 655
Query: 785 ALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAKRNRRERD 844
+ AAAL+ ++PF P+ + VDE KR A + SDH+ + Y+D++ + ERD
Sbjct: 656 ITSAAAALSFKSPFYSPLGKESRVDEIKRRMARNMRSDHLMVHNTIIAYRDSRYSHAERD 715
Query: 845 FCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSK-GPSAYNRYSHDLEMVCAILCAGL 903
FC++NFLS +TLQ +E M++QF +LL + F+ S +A N+ S + ++ AI+ AGL
Sbjct: 716 FCYKNFLSSMTLQQLERMKNQFSELLYNYKFLASSNCKDAASNKNSEKIPLLRAIIGAGL 775
Query: 904 YPNVVQCKR----KGK-RAV--FYTKEVGQVALHPSSVNANQNNFPLPYMVYSEMVKTNN 956
YPN+ ++ K + RA+ T + +V HPSSVN+ ++ F Y VY + K+ +
Sbjct: 776 YPNMAHLRKSRQIKNRVRAIHTMATDDGRRVNFHPSSVNSGESGFDSAYFVYFQRQKSTD 835
Query: 957 INVYDSTNISEYALLLFGGNLIPSKTGEGIEM-LGGYLHFSASKTVLELIRKLRGELDKL 1015
+ + DST + AL++FG + T + + +F ++ +++ +LR L+KL
Sbjct: 836 LFLLDSTMVFPMALIIFGDGVEAGVTQNTPYLCVAKTYYFKCNRETADVVIQLRSNLEKL 895
Query: 1016 LNRKIEDPR-VDLSVEGKAVVSAVVELL 1042
L +K P ++ + K ++ A+ ELL
Sbjct: 896 LLKKALYPAPIEENGYEKQLIKAI-ELL 922
>TAIR|locus:2196255 [details] [associations]
symbol:AT1G58050 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AC079604
IPI:IPI00531251 PIR:F96613 RefSeq:NP_176102.1 UniGene:At.52250
ProteinModelPortal:Q9C6G0 SMR:Q9C6G0 PaxDb:Q9C6G0 PRIDE:Q9C6G0
EnsemblPlants:AT1G58050.1 GeneID:842172 KEGG:ath:AT1G58050
TAIR:At1g58050 HOGENOM:HOG000240812 InParanoid:Q9C6G0 OMA:ISPENED
PhylomeDB:Q9C6G0 ProtClustDB:CLSN2679369 Genevestigator:Q9C6G0
Uniprot:Q9C6G0
Length = 1417
Score = 1155 (411.6 bits), Expect = 2.8e-135, Sum P(2) = 2.8e-135
Identities = 291/735 (39%), Positives = 409/735 (55%)
Query: 185 DERHGSTEKELQMSIETERRVGNLLNSSQGNVPVNDSGIES------SEVARRPKLSVKV 238
+E G T +E Q E+ V +LL + ++ GI S S V L V
Sbjct: 500 EESLGITSREEQ---RREKFVESLLEADNFSLTTTSRGIHSALPMVDSCVKENDDLDVVK 556
Query: 239 ANTISPPQSDSAKERLNVILKERQEKLKSSDSGKAMLSFREKLPAFKMKAEFLKAVAENQ 298
+N + S A E + LK++QE K K ML R LP ++K + L+ + E
Sbjct: 557 SNHRARRNSSMAAECSS--LKQKQENKKKMQKYKDMLKTRAALPISEVKKDILQKLKEKD 614
Query: 299 VLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQPXXXXXXXXXXXXXXERGENL 358
VLVV GETG GKTTQ+PQFIL++ + S G CNIICTQP E
Sbjct: 615 VLVVCGETGSGKTTQVPQFILDDMIDSGHGGYCNIICTQPRAITVAQRVADERCEPPPGF 674
Query: 359 GETV-GYQIRLESKRSAQTRLLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFX 417
+V YQ+R ++ RS +TRLLFCTTG+LLR+LV D L V+H++VDE+HER + DF
Sbjct: 675 DNSVVAYQVRHQNARSDKTRLLFCTTGILLRKLVGDTTLKDVTHIIVDEVHERSLMGDFL 734
Query: 418 XXXXXXXXXXXXXXXXX------XMSATINADLFSKYFGNAPTVHIPGLTFPVTDLFLED 471
MSAT++A FS+YFG P + G T PVT FLED
Sbjct: 735 LIILKSLIEKQSWDNALPKLKVILMSATVDAHQFSRYFGQCPIITAQGRTHPVTTYFLED 794
Query: 472 VLEKTRYKMNS------KLD-SFQGNXXXXXXQDSKKDHLTALFEDVDIDSNYKNYRAST 524
+ E+T+Y + S D S KK+ + A + D + S ++ ++
Sbjct: 795 IYERTKYLLASDSPAALSSDTSITDKLGSVNVPRGKKNLMLAGWGDSYLVS--EDSLNTS 852
Query: 525 RASLEAWSAEQIDLGLVESTIEYICRHEGDGAILVFLTGWNDISKLLDQIKVN-KFLGDP 583
S++ ++ +D L+E I +I +GAILVFL G ++I+ LL+++ + +F G
Sbjct: 853 YDSIKYIASAVVDYDLLEELICHIDDTCEEGAILVFLPGMSEINMLLNRLAASYRFRGAS 912
Query: 584 NKFLVLPLHGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETS 643
+L LPLH S+ + Q+++F RPP RK+++ATNIAE+SITI+DVVYV+D GK KE
Sbjct: 913 GDWL-LPLHSSIASTEQKKVFLRPPKGIRKVIIATNIAETSITIEDVVYVIDSGKHKENR 971
Query: 644 YDALNKLACLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAML-PYQLPEILRTP 702
Y+ KL+ ++ W+SKA+A QR GRAGRV+PG C+ LY R + ++ PYQ+PE+LR P
Sbjct: 972 YNPHKKLSSMVEDWVSKANARQRMGRAGRVKPGHCFSLYTRHRFEKLMRPYQVPEMLRVP 1031
Query: 703 LQELCLHIKSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCT 762
L ELCLHIK L LG + FLSKAL+PP A+ +AI LL +GAL+ E LTPLG HL
Sbjct: 1032 LVELCLHIKLLGLGQIKPFLSKALEPPSESAINSAILLLHKVGALEGDEELTPLGHHLAK 1091
Query: 763 LPVDPNIGKMLLMGAIFQCLNPALTIAAALAH-RNPFVLPVNMQKEVDEAKRSFAGDSC- 820
LPVD IGKMLL G IF CL+P L+IAA L+ ++PFV + Q VD K + D
Sbjct: 1092 LPVDLLIGKMLLYGGIFGCLSPILSIAAFLSCCKSPFVYAKDEQN-VDRVKLALLSDKLE 1150
Query: 821 -----------SDHIALLKAFDGYKDAKRN---RRERDFCWENFLSPITLQMMEDMRSQF 866
SDH+ ++ A++ + + FC FL+ ++MM + R +F
Sbjct: 1151 SSSNLNNNDRQSDHLLMVVAYEKWVRILHEQGFKAAESFCESKFLNSSVMRMMRERRVEF 1210
Query: 867 LDLLSDIGFVDKSKG 881
LL+DIG ++ KG
Sbjct: 1211 GMLLADIGLINLPKG 1225
Score = 191 (72.3 bits), Expect = 2.8e-135, Sum P(2) = 2.8e-135
Identities = 58/183 (31%), Positives = 100/183 (54%)
Query: 872 DIGFVDKSKGPSAYNRYSHDLEMVCAILCAGLYPNVVQ---------CKRKGKRAVFYTK 922
D+ F DK++ P +N YS + E+V AILCAGL PN+ + + + AV++
Sbjct: 1234 DVWFSDKTQ-P--FNMYSQEPEVVKAILCAGLCPNIAEGLVNRLTKPAEETQRYAVWHDG 1290
Query: 923 EVGQVALHPSSVNANQNNFPLPYMVYSEMVKTNNINVY--DSTNISEYALLLFGGNL-IP 979
+ +V +H +S+N N F P++V+ E ++T + VY D+T +S +++LLFGG++ +
Sbjct: 1291 K-REVHIHRNSINKNCKAFQYPFIVFLEKLETKKV-VYLQDTTVVSPFSILLFGGSINVH 1348
Query: 980 SKTGEGIEMLGGYLHFSASKTVLELIRKLRGELDKLLNRKIEDPRVDLSVEGKAVVSAVV 1039
++G + G+L +A L ++LR L +L I P V + VV ++V
Sbjct: 1349 HQSGS--VTIDGWLKLTAPAQTAVLFKELRLTLHSILKDLIRKPEKSGIVHNE-VVKSMV 1405
Query: 1040 ELL 1042
LL
Sbjct: 1406 HLL 1408
Score = 39 (18.8 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 11/38 (28%), Positives = 20/38 (52%)
Query: 10 KSIFSRSKYLLVVAAPITRPRVLSTSSVSFPLKTAKPP 47
+ I+ R+KYLL +P + S +S++ L + P
Sbjct: 793 EDIYERTKYLLASDSPAA---LSSDTSITDKLGSVNVP 827
Score = 39 (18.8 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 12/48 (25%), Positives = 22/48 (45%)
Query: 539 GLVESTIEYICRHEGDGAILVFLTGWNDISKLLDQIKVNKFLGDPNKF 586
G +++ IE + DGA L W ++ ++ VN F ++F
Sbjct: 84 GFLDNQIELVLSSLRDGATLETALDWLCLNLPSHELPVN-FSNGASRF 130
>UNIPROTKB|Q9H6S0 [details] [associations]
symbol:YTHDC2 "Probable ATP-dependent RNA helicase YTHDC2"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50088 PROSITE:PS51061
PROSITE:PS51194 SMART:SM00248 SMART:SM00490 SMART:SM00847
GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 EMBL:AC093208 EMBL:AC010389 EMBL:BC137285
EMBL:AK025593 IPI:IPI00010200 RefSeq:NP_073739.3 UniGene:Hs.231942
PDB:2YU6 PDBsum:2YU6 ProteinModelPortal:Q9H6S0 SMR:Q9H6S0
IntAct:Q9H6S0 PhosphoSite:Q9H6S0 DMDM:239938805 PaxDb:Q9H6S0
PeptideAtlas:Q9H6S0 PRIDE:Q9H6S0 Ensembl:ENST00000161863
GeneID:64848 KEGG:hsa:64848 UCSC:uc003kqn.3 CTD:64848
GeneCards:GC05P112877 HGNC:HGNC:24721 HPA:HPA037364
neXtProt:NX_Q9H6S0 PharmGKB:PA134912676 HOGENOM:HOG000155703
HOVERGEN:HBG063891 InParanoid:Q9H6S0 OMA:RAFWESS OrthoDB:EOG4JWVCN
PhylomeDB:Q9H6S0 EvolutionaryTrace:Q9H6S0 GenomeRNAi:64848
NextBio:66962 ArrayExpress:Q9H6S0 Bgee:Q9H6S0 CleanEx:HS_YTHDC2
Genevestigator:Q9H6S0 GermOnline:ENSG00000047188 Uniprot:Q9H6S0
Length = 1430
Score = 855 (306.0 bits), Expect = 1.6e-131, Sum P(3) = 1.6e-131
Identities = 189/435 (43%), Positives = 272/435 (62%)
Query: 513 IDSNYKNYRASTRASLEAW----SAEQIDLGLVESTIEYICRHEGD-GAILVFLTGWNDI 567
+ +N + A R L+A+ E++DL L+ + IC H D GA+L+FL G+++I
Sbjct: 577 VQTNGSDLSAEDRELLKAYHHSFDDEKVDLDLIMHLLYNIC-HSCDAGAVLIFLPGYDEI 635
Query: 568 SKLLDQIKVN--KFLGDPNKFLVLPLHGSMPTINQREIFDRPPPNKRKIVLATNIAESSI 625
L D+I + +F +++ V LH +M T +Q+++ PP RKI+L+TNIAE+SI
Sbjct: 636 VGLRDRILFDDKRFADSTHRYQVFMLHSNMQTSDQKKVLKNPPAGVRKIILSTNIAETSI 695
Query: 626 TIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRI 685
T++DVV+V+D GK KE S+DALN + L WISKASA QR+GRAGR +PG+C++L+ R+
Sbjct: 696 TVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGRAGRCRPGICFRLFSRL 755
Query: 686 IHDAMLPYQLPEILRTPLQELCLHIKSLQLGT--VGSFLSKALQPPDPLAVQNAIELLKT 743
ML +Q PE+LR PLQELCLH K L + FL KA +PP L V+NA+++LKT
Sbjct: 756 RFQNMLEFQTPELLRMPLQELCLHTKLLAPVNCPIADFLMKAPEPPPALIVRNAVQMLKT 815
Query: 744 IGALDDMENLTPLGRHLCTLPVDPNIGKMLLMGAIFQCLNPALTIAAALAHRNPFVLPVN 803
I A+D E+LT LG HL LPV+P++GKM+L + +CL+P LTIA LA+R+PFVLP
Sbjct: 816 IDAMDTWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCLDPILTIACTLAYRDPFVLPTQ 875
Query: 804 M-QKEVDE-AKRSFAGDSCSDHIALLKAFDGYKDAKRNRRERDFCWENFLSPITLQMMED 861
QK ++ F + SDH+ALL+AF ++ A+ + ER FC +NFLS T++++
Sbjct: 876 ASQKRAAMLCRKRFTAGAFSDHMALLRAFQAWQKARSDGWERAFCEKNFLSQATMEIIIG 935
Query: 862 MRSQFLDLLSDIGFVDKSKGPSA--YNRYSHDLEMVCAILCAGLYPNVVQCKRKGKRAVF 919
MR+Q L L GFV G N S + +V A L AG+YPN+V R+ V
Sbjct: 936 MRTQLLGQLRASGFVRARGGGDIRDVNTNSENWAVVKAALVAGMYPNLVHVDREN--LVL 993
Query: 920 YTKEVGQVALHPSSV 934
+ +V HP+SV
Sbjct: 994 TGPKEKKVRFHPASV 1008
Score = 440 (159.9 bits), Expect = 1.6e-131, Sum P(3) = 1.6e-131
Identities = 88/204 (43%), Positives = 122/204 (59%)
Query: 276 SFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIIC 335
SFR+ LP F+ + E +K + EN+V+++ GETG GKTTQ+PQF+L++ + G C I C
Sbjct: 188 SFRQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCFKN--GIPCRIFC 245
Query: 336 TQPXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVE-DP 394
TQP ER E +G+T+GYQIRLES+ S +T L FCT GVLLR L+ D
Sbjct: 246 TQPRRLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMAGDS 305
Query: 395 DLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGNAPT 454
LS V+H++VDE+HER DF SA ++ +LF +YFG+ P
Sbjct: 306 TLSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPV 365
Query: 455 VHIPGLTFPVTDLFLEDVLEKTRY 478
++I G F V ++FLED+L T Y
Sbjct: 366 IYIQGRPFEVKEMFLEDILRTTGY 389
Score = 189 (71.6 bits), Expect = 1.7e-52, Sum P(3) = 1.7e-52
Identities = 57/182 (31%), Positives = 91/182 (50%)
Query: 812 KRSFAGDSCSDHIALLKAFDGYKDAKRNRRERDFCWENFLSPITLQMMEDMRSQFLDLLS 871
++ F + SDH+ALL+AF ++ A+ + ER FC +NFLS T++++ MR+Q L L
Sbjct: 886 RKRFTAGAFSDHMALLRAFQAWQKARSDGWERAFCEKNFLSQATMEIIIGMRTQLLGQLR 945
Query: 872 DIGFVDKSKGPSA--YNRYSHDLEMVCAILCAGLYPNVVQCKRKGKRAVFYTKEVGQVAL 929
GFV G N S + +V A L AG+YPN+V R+ V + +V
Sbjct: 946 ASGFVRARGGGDIRDVNTNSENWAVVKAALVAGMYPNLVHVDREN--LVLTGPKEKKVRF 1003
Query: 930 HPSSV--NANQNNFP-----------LP--YMVYSEMVKTNNI-NVYDSTNISEYALLLF 973
HP+SV P LP +++Y EM + + I N+ + ++ +L+F
Sbjct: 1004 HPASVLSQPQYKKIPPANGQAAAIKALPTDWLIYDEMTRAHRIANIRCCSAVTPVTILVF 1063
Query: 974 GG 975
G
Sbjct: 1064 CG 1065
Score = 156 (60.0 bits), Expect = 1.2e-101, Sum P(3) = 1.2e-101
Identities = 50/197 (25%), Positives = 91/197 (46%)
Query: 125 LEQMKRGEEQEMIIKRKFSRADQQTLADMAHQLGLHFHAYNKGKALAVSKVPLPMYRPDL 184
LE+ + G+++EM + ++ + ++ LGL +K K ++ L + + D
Sbjct: 53 LERFRYGDQREMEFPSSLTSTERAFIHRLSQSLGL----VSKSKGKGANRY-LTVKKKD- 106
Query: 185 DERHGSTEKELQMSIETERRVGNLLNSSQGNVPVNDSGIESSEVARRPKLSVKVANTISP 244
GS M+ + + S PV + E +E+ + + A
Sbjct: 107 ----GSETAHAMMTCNLTHNTKHAVRSLIQRFPVTNK--ERTELLPKTERGNVFAVEAEN 160
Query: 245 PQSDSAKERLNVILKERQEKLKSSDSGKAMLSFREKLPAFKMKAEFLKAVAENQVLVVSG 304
+ RLN + + K S+ SFR+ LP F+ + E +K + EN+V+++ G
Sbjct: 161 REMSKTSGRLNNGIPQIPVKRGESEFD----SFRQSLPVFEKQEEIVKIIKENKVVLIVG 216
Query: 305 ETGCGKTTQLPQFILEE 321
ETG GKTTQ+PQF+L++
Sbjct: 217 ETGSGKTTQIPQFLLDD 233
Score = 56 (24.8 bits), Expect = 1.6e-131, Sum P(3) = 1.6e-131
Identities = 14/54 (25%), Positives = 26/54 (48%)
Query: 989 LGGYLHFSASKTVLELIRKLRGELDKLLNRKIEDPRVDLSVEGKAVVSAVVELL 1042
L +LHF+ L+ +LR + L R++ P S +A + A++ +L
Sbjct: 1107 LDEWLHFTLEPEAASLLLQLRQKWHSLFLRRMRAPSKPWSQVDEATIRAIIAVL 1160
>UNIPROTKB|F1NS70 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 OMA:RAFWESS EMBL:AADN02056192 EMBL:AADN02056193
IPI:IPI00591470 Ensembl:ENSGALT00000000247 Uniprot:F1NS70
Length = 1339
Score = 833 (298.3 bits), Expect = 1.9e-131, Sum P(3) = 1.9e-131
Identities = 187/423 (44%), Positives = 264/423 (62%)
Query: 521 RASTRASLEAWSAEQIDLGLVESTIEYICRHEGDGAILVFLTGWNDISKLLDQIKVN--K 578
R +A ++ E++DL L+ + IC GAIL+FL G+++I L D+I + +
Sbjct: 499 RELLKAYHHSFDDEKVDLDLIMHLLYNICNSSDGGAILIFLPGYDEIISLRDRIIFDDKR 558
Query: 579 FLGDPN-KFLVLPLHGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCG 637
F+ + + K+ V LH +M T++Q+ + PP RKI+L+TNIAE+SIT++DVV+V+D G
Sbjct: 559 FVDNAHSKYQVFMLHSNMQTLDQKNVLKTPPSGIRKIILSTNIAETSITVNDVVFVIDSG 618
Query: 638 KAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQLPE 697
K KE S+DAL+ + L WISKASA QRRGRAGR +PGVC+ L+ R+ ML +Q PE
Sbjct: 619 KMKEKSFDALSCVTMLKTVWISKASAIQRRGRAGRCRPGVCFHLFSRLRFQNMLEFQTPE 678
Query: 698 ILRTPLQELCLHIKSLQLGT--VGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTP 755
+ R PLQELCLH K L V FL KA PP L V+NAI++LK I A+D E+LT
Sbjct: 679 LRRMPLQELCLHTKLLAPVNCPVVDFLMKAPDPPPALIVRNAIQMLKKIDAMDVWEDLTE 738
Query: 756 LGRHLCTLPVDPNIGKMLLMGAIFQCLNPALTIAAALAHRNPFVLP-VNMQKEVDE-AKR 813
LG HL LPV+P++GKM+L + +CL+P LTIA LA+R+PFVLP V QK ++
Sbjct: 739 LGYHLAELPVEPHLGKMVLCAVVLKCLDPILTIACTLAYRDPFVLPTVASQKRAAMLCRK 798
Query: 814 SFAGDSCSDHIALLKAFDGYKDAKRNRRERDFCWENFLSPITLQMMEDMRSQFLDLLSDI 873
A + SDH+ LL+AF ++ A+ + ER FC +NFLS T++++ MR+Q L L +
Sbjct: 799 RLAAGTFSDHMVLLRAFQAWQKARSDGWERVFCEKNFLSQATMEIIIGMRTQLLGQLRAL 858
Query: 874 GFVDKSKGPSA--YNRYSHDLEMVCAILCAGLYPNVVQCKRKGKRAVFYTKEVGQVALHP 931
GFV G N S + +V A L AG+YPN+V R+ V + +V HP
Sbjct: 859 GFVRARGGADIRDVNVNSENWAVVKAALVAGMYPNLVHVDREN--LVLTGPKEKKVRFHP 916
Query: 932 SSV 934
+SV
Sbjct: 917 TSV 919
Score = 459 (166.6 bits), Expect = 1.9e-131, Sum P(3) = 1.9e-131
Identities = 107/277 (38%), Positives = 151/277 (54%)
Query: 276 SFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIIC 335
SFR+ LP F+ K E +K + EN+V+++ GETG GKTTQ+PQF+L++ + G C I C
Sbjct: 98 SFRQSLPVFEKKEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCYEN--GVPCRIFC 155
Query: 336 TQPXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVE-DP 394
TQP ER E +G+TVGYQIRLES+ S +T L FCT G+LLR L+ D
Sbjct: 156 TQPRRLAVIAVAERVAAERREKVGQTVGYQIRLESRVSPRTLLTFCTNGILLRTLMAGDS 215
Query: 395 DLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGNAPT 454
LS V+H++VDE+HER DF SA ++A+LF KYFG+ P
Sbjct: 216 ALSTVTHVIVDEVHERDRFSDFLLIKLRDILQNQTNLKLIISSAALDANLFIKYFGSCPV 275
Query: 455 VHIPGLTFPVTDLFLEDVLEKTRYKMNSKLDSFQGNXXXXXXQDSKKDHLTALFEDVDID 514
+HI G F V ++FLED+L T Y N ++ ++ Q +K T L E
Sbjct: 276 IHIQGRPFEVKEMFLEDILRSTGYT-NKEMIKYKKEK-----QREEKQQST-LTEWCCAQ 328
Query: 515 SNYKNYRASTRASLEAWSAEQIDLGLVESTIEYICRH 551
N N + R S+ + S E L++S+ + + H
Sbjct: 329 ENSSNPESRRRRSVASVSEEY---NLLDSSGDTVFNH 362
Score = 190 (71.9 bits), Expect = 9.1e-55, Sum P(3) = 9.1e-55
Identities = 60/182 (32%), Positives = 92/182 (50%)
Query: 812 KRSFAGDSCSDHIALLKAFDGYKDAKRNRRERDFCWENFLSPITLQMMEDMRSQFLDLLS 871
KR AG + SDH+ LL+AF ++ A+ + ER FC +NFLS T++++ MR+Q L L
Sbjct: 798 KRLAAG-TFSDHMVLLRAFQAWQKARSDGWERVFCEKNFLSQATMEIIIGMRTQLLGQLR 856
Query: 872 DIGFVDKSKGPSA--YNRYSHDLEMVCAILCAGLYPNVVQCKRKGKRAVFYTKEVGQVAL 929
+GFV G N S + +V A L AG+YPN+V R+ V + +V
Sbjct: 857 ALGFVRARGGADIRDVNVNSENWAVVKAALVAGMYPNLVHVDREN--LVLTGPKEKKVRF 914
Query: 930 HPSSV--NANQNNFP-----------LP--YMVYSEMVKTNNI-NVYDSTNISEYALLLF 973
HP+SV A P LP +++Y EM + + I N+ + ++ + LF
Sbjct: 915 HPTSVLSQAQYKKIPPSNGQAAAVQALPTDWLIYDEMTRAHRIANIRCCSVVTPVTVALF 974
Query: 974 GG 975
G
Sbjct: 975 SG 976
Score = 55 (24.4 bits), Expect = 1.9e-131, Sum P(3) = 1.9e-131
Identities = 14/54 (25%), Positives = 26/54 (48%)
Query: 989 LGGYLHFSASKTVLELIRKLRGELDKLLNRKIEDPRVDLSVEGKAVVSAVVELL 1042
L +LHF V L+ +L+ + LL R++ P S + + A++ +L
Sbjct: 1018 LDEWLHFKLDSEVAGLLMQLKLKWHSLLLRRMRAPSKPWSQADEITIRAIISVL 1071
Score = 46 (21.3 bits), Expect = 5.4e-88, Sum P(3) = 5.4e-88
Identities = 16/49 (32%), Positives = 20/49 (40%)
Query: 183 DLDERHGSTEK-ELQMSIETERRVGNLLNSSQGNVPVNDSGIESSEVAR 230
D + G TE +L S GNL SS ND G E E+ +
Sbjct: 455 DWAKHFGQTEVVDLLESYSASMESGNLDESSLVQASGNDLGAEDRELLK 503
>MGI|MGI:2448561 [details] [associations]
symbol:Ythdc2 "YTH domain containing 2" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50088 PROSITE:PS51061
PROSITE:PS51194 SMART:SM00248 SMART:SM00490 SMART:SM00847
MGI:MGI:2448561 GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146 PROSITE:PS50882
CTD:64848 HOGENOM:HOG000155703 OMA:RAFWESS OrthoDB:EOG4JWVCN
EMBL:BC138263 EMBL:BC171951 IPI:IPI00343249 RefSeq:NP_001156485.1
UniGene:Mm.244482 ProteinModelPortal:B2RR83 SMR:B2RR83
PhosphoSite:B2RR83 PaxDb:B2RR83 PRIDE:B2RR83
Ensembl:ENSMUST00000037763 GeneID:240255 KEGG:mmu:240255
UCSC:uc008evb.2 InParanoid:B2RR83 ChiTaRS:YTHDC2 NextBio:384522
Bgee:B2RR83 Genevestigator:B2RR83 Uniprot:B2RR83
Length = 1445
Score = 861 (308.1 bits), Expect = 2.8e-131, Sum P(3) = 2.8e-131
Identities = 190/435 (43%), Positives = 274/435 (62%)
Query: 513 IDSNYKNYRASTRASLEAW----SAEQIDLGLVESTIEYICRHEGD-GAILVFLTGWNDI 567
+ +N + A R L+A+ E++DL L+ + IC H D GAIL+FL G+++I
Sbjct: 592 VQTNGNDLSAEDRELLKAYHHSFDDEKVDLDLIMHLLYNIC-HSCDAGAILIFLPGYDEI 650
Query: 568 SKLLDQIKVN--KFLGDPNKFLVLPLHGSMPTINQREIFDRPPPNKRKIVLATNIAESSI 625
L D+I + +F + +++ V LH +M T +Q+++ PP RKI+L+TNIAE+SI
Sbjct: 651 VGLRDRILFDDKRFADNTHRYQVFMLHSNMQTSDQKKVLKNPPAGVRKIILSTNIAETSI 710
Query: 626 TIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRI 685
T++DVV+V+D GK KE S+DALN + L WISKASA QR+GRAGR +PG+C++L+ R+
Sbjct: 711 TVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGRAGRCRPGICFRLFSRL 770
Query: 686 IHDAMLPYQLPEILRTPLQELCLHIKSLQLG--TVGSFLSKALQPPDPLAVQNAIELLKT 743
ML +Q PE+LR PLQELCLH K L T+ FL KA +PP L V+NA+++LKT
Sbjct: 771 RFQNMLEFQTPELLRMPLQELCLHTKLLAPVNCTIADFLMKAPEPPPALIVRNAVQMLKT 830
Query: 744 IGALDDMENLTPLGRHLCTLPVDPNIGKMLLMGAIFQCLNPALTIAAALAHRNPFVLPVN 803
I A+D E+LT LG HL LPV+P++GKM+L + +CL+P LTIA LA+R+PFVLP
Sbjct: 831 IDAMDAWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCLDPILTIACTLAYRDPFVLPTQ 890
Query: 804 M-QKEVDE-AKRSFAGDSCSDHIALLKAFDGYKDAKRNRRERDFCWENFLSPITLQMMED 861
QK ++ F + SDH+ALL+AF ++ A+ + ER FC +NFLS T++++
Sbjct: 891 ASQKRAAMLCRKRFTAGTFSDHMALLRAFQAWQKARSDGWERAFCEKNFLSQATMEIIIG 950
Query: 862 MRSQFLDLLSDIGFVDKSKGPSA--YNRYSHDLEMVCAILCAGLYPNVVQCKRKGKRAVF 919
MR+Q L L GFV G N S + +V A L AG+YPN+V R+ +
Sbjct: 951 MRTQLLGQLRASGFVRARGGGDIRDVNTNSENWAVVKAALVAGMYPNLVHVDREN--VIL 1008
Query: 920 YTKEVGQVALHPSSV 934
+ +V HP+SV
Sbjct: 1009 TGPKEKKVRFHPTSV 1023
Score = 440 (159.9 bits), Expect = 2.8e-131, Sum P(3) = 2.8e-131
Identities = 88/204 (43%), Positives = 122/204 (59%)
Query: 276 SFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIIC 335
SFR+ LP F+ + E +K + EN+V+++ GETG GKTTQ+PQF+L++ + G C I C
Sbjct: 203 SFRQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCFKN--GIPCRIFC 260
Query: 336 TQPXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVE-DP 394
TQP ER E +G+T+GYQIRLES+ S +T L FCT GVLLR L+ D
Sbjct: 261 TQPRRLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMAGDS 320
Query: 395 DLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGNAPT 454
LS V+H++VDE+HER DF SA ++ +LF +YFG+ P
Sbjct: 321 TLSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPV 380
Query: 455 VHIPGLTFPVTDLFLEDVLEKTRY 478
++I G F V ++FLED+L T Y
Sbjct: 381 IYIQGRPFEVKEMFLEDILRTTGY 404
Score = 189 (71.6 bits), Expect = 1.0e-51, Sum P(2) = 1.0e-51
Identities = 68/242 (28%), Positives = 113/242 (46%)
Query: 812 KRSFAGDSCSDHIALLKAFDGYKDAKRNRRERDFCWENFLSPITLQMMEDMRSQFLDLLS 871
++ F + SDH+ALL+AF ++ A+ + ER FC +NFLS T++++ MR+Q L L
Sbjct: 901 RKRFTAGTFSDHMALLRAFQAWQKARSDGWERAFCEKNFLSQATMEIIIGMRTQLLGQLR 960
Query: 872 DIGFVDKSKGPSA--YNRYSHDLEMVCAILCAGLYPNVVQCKRKGKRAVFYTKEVGQVAL 929
GFV G N S + +V A L AG+YPN+V R+ + + +V
Sbjct: 961 ASGFVRARGGGDIRDVNTNSENWAVVKAALVAGMYPNLVHVDREN--VILTGPKEKKVRF 1018
Query: 930 HPSSV--NANQNNFP-----------LP--YMVYSEMVKTNNI-NVYDSTNISEYALLLF 973
HP+SV P LP +++Y EM + + I N+ + ++ +L+F
Sbjct: 1019 HPTSVLSQPQYKKIPPANGQAAAIQALPTDWLIYDEMTRAHRIANIRCCSAVTPVTVLVF 1078
Query: 974 GG--NLIPSKTGEGIEMLGGYLHFSASKTVLE--LIRKLRG-ELDKLLNRKIEDPRVDLS 1028
G L + E + +S + +E L +LD+ LN K+E L
Sbjct: 1079 CGPARLASNALQEPSSFRADGIPNDSSDSEMEDRTTANLAALKLDEWLNFKLEPEAASLL 1138
Query: 1029 VE 1030
++
Sbjct: 1139 LQ 1140
Score = 157 (60.3 bits), Expect = 1.7e-101, Sum P(3) = 1.7e-101
Identities = 51/197 (25%), Positives = 92/197 (46%)
Query: 125 LEQMKRGEEQEMIIKRKFSRADQQTLADMAHQLGLHFHAYNKGKALAVSKVPLPMYRPDL 184
LE+ + G+++EM + ++ + ++ LGL +K K ++ L + + D
Sbjct: 68 LERFRYGDQREMEFPSSLTSTERAFIHRLSQSLGL----VSKSKGKGANRY-LTVKKKD- 121
Query: 185 DERHGSTEKELQMSIETERRVGNLLNSSQGNVPVNDSGIESSEVARRPKLSVKVANTISP 244
GS M+ + + S PV + E +E+ + + A
Sbjct: 122 ----GSETAHAMMTCNLTHNTKHAVRSLIQRFPVTNK--ERTELLPKTERGNVFAVEAEN 175
Query: 245 PQSDSAKERLNVILKERQEKLKSSDSGKAMLSFREKLPAFKMKAEFLKAVAENQVLVVSG 304
+ RLN + Q +K +S SFR+ LP F+ + E +K + EN+V+++ G
Sbjct: 176 REMSKTSGRLNNGIP--QVPVKRGES--EFDSFRQSLPVFEKQEEIVKIIKENKVVLIVG 231
Query: 305 ETGCGKTTQLPQFILEE 321
ETG GKTTQ+PQF+L++
Sbjct: 232 ETGSGKTTQIPQFLLDD 248
Score = 48 (22.0 bits), Expect = 2.8e-131, Sum P(3) = 2.8e-131
Identities = 13/54 (24%), Positives = 25/54 (46%)
Query: 989 LGGYLHFSASKTVLELIRKLRGELDKLLNRKIEDPRVDLSVEGKAVVSAVVELL 1042
L +L+F L+ +LR + L R++ P S +A + A++ +L
Sbjct: 1122 LDEWLNFKLEPEAASLLLQLRQKWHSLFLRRMRAPSKPWSQVDEATIRAIIAVL 1175
>UNIPROTKB|J9P6V4 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 OMA:WLLYQEK
GeneTree:ENSGT00550000074257 EMBL:AAEX03001437
Ensembl:ENSCAFT00000043416 Uniprot:J9P6V4
Length = 1369
Score = 865 (309.6 bits), Expect = 3.3e-131, Sum P(3) = 3.3e-131
Identities = 199/555 (35%), Positives = 322/555 (58%)
Query: 512 DIDSNYKNYRASTRASLEAWSAEQIDLGLVESTIEYICRHEG-------DGAILVFLTGW 564
D++ Y+ Y T+ ++ + +I+L L+ + Y+ + +GA+L+FL G
Sbjct: 818 DLNPFYQKYSNRTQHAILYMNPHKINLDLILELLIYLEIPDRSPQFRNIEGAVLIFLPGL 877
Query: 565 NDISKLLDQIKVNK-FLGDPNKFLVLPLHGSMPTINQREIFDRPPPNKRKIVLATNIAES 623
I +L D + ++ F + ++ V+ LH + T +Q F PPP RKIVLATNIAE+
Sbjct: 878 AHIQQLYDLLSTDRRFFSE--RYKVIALHSILSTQDQAAAFTLPPPGVRKIVLATNIAET 935
Query: 624 SITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPGVCYKLYP 683
ITI DVV+V+D G+ KE Y ++++ L+ +++SKASA QR+GRAGRV+ G C+++Y
Sbjct: 936 GITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGRVRDGFCFRMYT 995
Query: 684 RIIHDAMLPYQLPEILRTPLQELCLHIKSLQLGTVGSFLSKALQPPDPLAVQNAIELLKT 743
R + + Y +PEILR PL+ELCLHI LG+ FLSKAL PP + NA+ LL+
Sbjct: 996 RERFEGFMDYSVPEILRVPLEELCLHIMKCNLGSPEDFLSKALDPPQLQVISNAMNLLRK 1055
Query: 744 IGALDDME-NLTPLGRHLCTLPVDPNIGKMLLMGAIFQCLNPALTIAAALAHRNPFVLPV 802
IGA + E LTPLG+HL LPV+ IGKML+ GAIF CL+P T+AA + ++PF P+
Sbjct: 1056 IGACELNEPTLTPLGQHLAALPVNVKIGKMLIFGAIFGCLDPVATLAAVMTEKSPFTTPI 1115
Query: 803 NMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAKRN---RRERDFCWENFLSPITLQMM 859
+ E D AK + A SDH+ + A+ G+K A++ R E +C NFL+ +L +
Sbjct: 1116 GRKDEADLAKSALAMAD-SDHLTIYNAYLGWKKARQEGGYRSEIAYCRRNFLNRTSLLTL 1174
Query: 860 EDMRSQFLDLLSDIGFVDKSKGPS-AYNRYSH-----DLEMVCAILCAGLYPNV---VQC 910
ED++ + + L+ GF + NR S ++ ++ A+L AGLY NV +
Sbjct: 1175 EDVKQELMKLVKAAGFSSSTTSNDWEENRASQTLPFQEIALLKAVLAAGLYDNVGKIIYT 1234
Query: 911 KRKG---KRAVFYTKEVGQVALHPSSVNANQNNFPLPYMVYSEMVKTNNINVYDSTNISE 967
K K A G+ +HPSSVN + + +++Y E V+ + + ++T I+
Sbjct: 1235 KSVDVTEKLACIVETAQGKAQVHPSSVNRDLQTYG--WLLYQEKVRYTRVYLRETTLITP 1292
Query: 968 YALLLFGGNLIPSKTGEGIEMLGGYLHFSASKTVLELIRKLRGELDKLLNRKIEDPRVDL 1027
+ +LLFGG+ I + E + + G+++F A + + ++LR +D +L +K+E+P+ +
Sbjct: 1293 FPVLLFGGD-IEVQHRERLLSVDGWIYFQAPVKIAVIFKQLRVLIDSVLRKKLENPK--M 1349
Query: 1028 SVEGKAVVSAVVELL 1042
S+E ++ + EL+
Sbjct: 1350 SLENDKILQIITELI 1364
Score = 425 (154.7 bits), Expect = 3.3e-131, Sum P(3) = 3.3e-131
Identities = 116/341 (34%), Positives = 174/341 (51%)
Query: 154 AHQLGLHFHAYNKGKALAVSKVPLPMYRPD-LDERHGSTEKELQMSIETERR----VGNL 208
A LG Y K +V ++ P YR L+ +KE +ET + + L
Sbjct: 433 AQHLGATLALYRLVKGQSVHQLLPPTYRDVWLEWSDAEKKKEELNKMETNKPRDLFIAKL 492
Query: 209 LNS----SQGNVPVNDSGIESSEVARRPKLSVKVANTISPPQSDSAK-ERLNVILKERQE 263
LN Q +++ E+SE ++ S +S K E L + +
Sbjct: 493 LNKLKQQQQQQQQHSENKRENSEDPEESWENLVSDEDFSALSLESEKAEDLEPV-RNLFR 551
Query: 264 KLKSSDSGKAMLSFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEEL 323
KL+S+ + +L R++LP FK + ++ + ++V+VV+GETG GK+TQ+P F+LE+ L
Sbjct: 552 KLQSTPKYQRLLKERQQLPVFKHRNSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLL 611
Query: 324 SSLRGAD-CNIICTQPXXXXXXXXXXXXXXERG-EN----LGETVGYQIRLESKRSAQTR 377
+ G CNI+CTQP E G EN GYQIR+ES+ S TR
Sbjct: 612 LNEWGTSKCNIVCTQPRRISAVSLATRVCDELGCENGPGGRNSLCGYQIRMESRASESTR 671
Query: 378 LLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMS 437
LL+CTTGVLLR+L ED L+ VSH++VDE+HER + DF MS
Sbjct: 672 LLYCTTGVLLRKLQEDGLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDLHLILMS 731
Query: 438 ATINADLFSKYFGNAPTVHIPGLTFPVTDLFLEDVLEKTRY 478
AT++++ FS YF + P + I G ++PV LED++E+T +
Sbjct: 732 ATVDSEKFSTYFTHCPILRISGRSYPVEVFHLEDIVEETGF 772
Score = 66 (28.3 bits), Expect = 6.3e-90, Sum P(2) = 6.3e-90
Identities = 26/93 (27%), Positives = 46/93 (49%)
Query: 209 LNSSQGNVPVNDSG-IESSEVARRPKL-SVKVANTISPP-QSDSAKERLNVILKERQEKL 265
LN S +P S E + RPK S ++ T+SPP QS + K+ I +++EK
Sbjct: 162 LNLSDDALPEGFSQEFEEQQPKSRPKFQSPQIPATVSPPLQSKTKKQEDTKIKPKKEEKN 221
Query: 266 KSSDSGKAMLSFREKLPAFKMKAEFLKAVAENQ 298
+ + +L + E+ + K+E K++ E +
Sbjct: 222 LEVNMKEWILRYAEQQNE-EEKSENSKSLEEEE 253
Score = 54 (24.1 bits), Expect = 3.3e-131, Sum P(3) = 3.3e-131
Identities = 18/60 (30%), Positives = 32/60 (53%)
Query: 93 EQRWWDPVWRAERLRQQAAEMEVFDQNEWWGKLEQMKRGEEQEMIIKRKFSRADQQTLAD 152
E+ +DP + L A ++ +Q + KLE+ K+G+++ RKF R + +TL D
Sbjct: 251 EEEKFDP--KERNLHLAAKLLDAKEQAATF-KLEKNKQGQKEAQEKIRKFQR-EMETLED 306
>UNIPROTKB|F1SLN0 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 EMBL:CU929534
Ensembl:ENSSSCT00000018413 Uniprot:F1SLN0
Length = 1367
Score = 842 (301.5 bits), Expect = 4.5e-130, Sum P(3) = 4.5e-130
Identities = 195/552 (35%), Positives = 321/552 (58%)
Query: 512 DIDSNYKNYRASTRASLEAWSAEQIDLGLVESTIEYICRHEG-------DGAILVFLTGW 564
D++ Y+ Y T+ ++ + +I+L L+ + Y+ + +GA+L+FL G
Sbjct: 818 DLNPFYQKYSNRTQHAILYMNPHKINLDLILELLTYLEITDRSPQFKNVEGAVLIFLPGL 877
Query: 565 NDISKLLDQIKVNK-FLGDPNKFLVLPLHGSMPTINQREIFDRPPPNKRKIVLATNIAES 623
I +L D + ++ F + ++ V+ LH + T +Q F PP RKIVLATNIAE+
Sbjct: 878 AHIQQLYDLLSTDRRFFSE--RYKVIALHSILSTQDQAAAFTLPPQGVRKIVLATNIAET 935
Query: 624 SITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPGVCYKLYP 683
ITI DVV+V+D G+ KE Y ++++ L+ +++SKASA QR+GRAGRV+ G C+++Y
Sbjct: 936 GITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGRVRDGFCFRMYT 995
Query: 684 RIIHDAMLPYQLPEILRTPLQELCLHIKSLQLGTVGSFLSKALQPPDPLAVQNAIELLKT 743
R + + Y +PEILR PL+ELCLHI LG+ FLSKAL PP + NA+ LL+
Sbjct: 996 RERFEGFMDYSVPEILRVPLEELCLHIMKCNLGSPEDFLSKALDPPQLQVISNAMHLLRK 1055
Query: 744 IGALDDME-NLTPLGRHLCTLPVDPNIGKMLLMGAIFQCLNPALTIAAALAHRNPFVLPV 802
IGA + E LTPLG+HL LPV+ IGKML+ GAIF CL+P T+AA + ++PF P+
Sbjct: 1056 IGACELNEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLDPVATLAAVMTEKSPFTTPI 1115
Query: 803 NMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAKRN---RRERDFCWENFLSPITLQMM 859
+ E D AK + A SDH+ + A+ G+K A++ R E +C NFL+ +L +
Sbjct: 1116 GRKDEADLAKSALAMAD-SDHLTIYNAYLGWKKAQQEGGYRSEIAYCRRNFLNRTSLLTL 1174
Query: 860 EDMRSQFLDLLSDIGFVDK---SKGPSAYNRYSHDLEMVCAILCAGLYPNV---VQCKRK 913
E+++ + LL I + K S ++ ++ ++ A+L AGLY NV + K
Sbjct: 1175 EEIKRRRTTLLKLIFYSIKTYYSSSRASQTLSFQEIALLKAVLTAGLYDNVGKIIYTKSV 1234
Query: 914 G---KRAVFYTKEVGQVALHPSSVNANQNNFPLPYMVYSEMVKTNNINVYDSTNISEYAL 970
K A G+ +HPSSVN + + +++Y E ++ + + ++T I+ +++
Sbjct: 1235 DVTEKLACIVETAQGKAQVHPSSVNRDLQTYG--WLLYQEKIRYARVYLRETTLITPFSV 1292
Query: 971 LLFGGNLIPSKTGEGIEMLGGYLHFSASKTVLELIRKLRGELDKLLNRKIEDPRVDLSVE 1030
LLFGG+ I + E + + G+++F A + + ++LR +D +L +K+E+P+ +S+E
Sbjct: 1293 LLFGGD-IEVQHRERLLSVDGWIYFQAPVKIAVIFKQLRVLIDSVLRKKLENPK--MSLE 1349
Query: 1031 GKAVVSAVVELL 1042
++ + EL+
Sbjct: 1350 NDKILQIITELI 1361
Score = 426 (155.0 bits), Expect = 4.5e-130, Sum P(3) = 4.5e-130
Identities = 116/341 (34%), Positives = 174/341 (51%)
Query: 154 AHQLGLHFHAYNKGKALAVSKVPLPMYRPD-LDERHGSTEKELQMSIETERR----VGNL 208
A LG Y K +V ++ P YR L+ +KE +ET + + L
Sbjct: 433 AQHLGATLALYRLVKGQSVHQLLPPTYRDVWLEWSDAEKKKEELNKMETNKPRDLFIAKL 492
Query: 209 LNS----SQGNVPVNDSGIESSEVARRPKLSVKVANTISPPQSDSAK-ERLNVILKERQE 263
LN Q +++ E+SE ++ S +S K E L + +
Sbjct: 493 LNKLKQQQQQQQQHSENKKENSEDPEESWENLVSDEDFSALSLESEKAEDLEPV-RNLFR 551
Query: 264 KLKSSDSGKAMLSFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEEL 323
KL+S+ + +L R++LP FK + ++ + ++V+VV+GETG GK+TQ+P F+LE+ L
Sbjct: 552 KLQSTPKYQRLLKERQQLPVFKHRNSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLL 611
Query: 324 SSLRGAD-CNIICTQPXXXXXXXXXXXXXXERG-EN----LGETVGYQIRLESKRSAQTR 377
+ G CNI+CTQP E G EN GYQIR+ES+ S TR
Sbjct: 612 LNEWGTSKCNIVCTQPRRISAVSLATRVCDELGCENGPGGKNSLCGYQIRMESRASESTR 671
Query: 378 LLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMS 437
LL+CTTGVLLR+L ED L+ VSH++VDE+HER + DF MS
Sbjct: 672 LLYCTTGVLLRKLQEDGLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDLHLILMS 731
Query: 438 ATINADLFSKYFGNAPTVHIPGLTFPVTDLFLEDVLEKTRY 478
AT++++ FS YF + P + I G ++PV LED++E+T +
Sbjct: 732 ATVDSEKFSTYFTHCPILRISGRSYPVEVFHLEDIIEETGF 772
Score = 67 (28.6 bits), Expect = 4.5e-130, Sum P(3) = 4.5e-130
Identities = 20/61 (32%), Positives = 36/61 (59%)
Query: 93 EQRWWDPVWRAERLRQQAAEM-EVFDQNEWWGKLEQMKRGEEQEMIIKRKFSRADQQTLA 151
E+ +DP ER Q AA++ ++ +Q + KLE+ ++G+++ RKF R + +TL
Sbjct: 250 EEEKFDP---NERYLQLAAKLLDIKEQAATF-KLEKNRQGQKEAQEKIRKFQRVEMETLE 305
Query: 152 D 152
D
Sbjct: 306 D 306
>UNIPROTKB|I3LQ47 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 OMA:WLLYQEK GeneTree:ENSGT00550000074257
EMBL:CU929534 Ensembl:ENSSSCT00000025611 Uniprot:I3LQ47
Length = 1370
Score = 842 (301.5 bits), Expect = 4.6e-130, Sum P(3) = 4.6e-130
Identities = 198/555 (35%), Positives = 321/555 (57%)
Query: 512 DIDSNYKNYRASTRASLEAWSAEQIDLGLVESTIEYICRHEG-------DGAILVFLTGW 564
D++ Y+ Y T+ ++ + +I+L L+ + Y+ + +GA+L+FL G
Sbjct: 818 DLNPFYQKYSNRTQHAILYMNPHKINLDLILELLTYLEITDRSPQFKNVEGAVLIFLPGL 877
Query: 565 NDISKLLDQIKVNK-FLGDPNKFLVLPLHGSMPTINQREIFDRPPPNKRKIVLATNIAES 623
I +L D + ++ F + ++ V+ LH + T +Q F PP RKIVLATNIAE+
Sbjct: 878 AHIQQLYDLLSTDRRFFSE--RYKVIALHSILSTQDQAAAFTLPPQGVRKIVLATNIAET 935
Query: 624 SITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPGVCYKLYP 683
ITI DVV+V+D G+ KE Y ++++ L+ +++SKASA QR+GRAGRV+ G C+++Y
Sbjct: 936 GITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGRVRDGFCFRMYT 995
Query: 684 RIIHDAMLPYQLPEILRTPLQELCLHIKSLQLGTVGSFLSKALQPPDPLAVQNAIELLKT 743
R + + Y +PEILR PL+ELCLHI LG+ FLSKAL PP + NA+ LL+
Sbjct: 996 RERFEGFMDYSVPEILRVPLEELCLHIMKCNLGSPEDFLSKALDPPQLQVISNAMHLLRK 1055
Query: 744 IGALDDME-NLTPLGRHLCTLPVDPNIGKMLLMGAIFQCLNPALTIAAALAHRNPFVLPV 802
IGA + E LTPLG+HL LPV+ IGKML+ GAIF CL+P T+AA + ++PF P+
Sbjct: 1056 IGACELNEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLDPVATLAAVMTEKSPFTTPI 1115
Query: 803 NMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAKRN---RRERDFCWENFLSPITLQMM 859
+ E D AK + A SDH+ + A+ G+K A++ R E +C NFL+ +L +
Sbjct: 1116 GRKDEADLAKSALAMAD-SDHLTIYNAYLGWKKAQQEGGYRSEIAYCRRNFLNRTSLLTL 1174
Query: 860 EDMRSQFLDLLSDIGFVDKSKGPSAYN-RYSHDLE-----MVCAILCAGLYPNV---VQC 910
E R+ L L+++ F + Y+ R S L ++ A+L AGLY NV +
Sbjct: 1175 ERRRTTLLKLMNENAFTHIFIAFTFYSSRASQTLSFQEIALLKAVLTAGLYDNVGKIIYT 1234
Query: 911 KRKG---KRAVFYTKEVGQVALHPSSVNANQNNFPLPYMVYSEMVKTNNINVYDSTNISE 967
K K A G+ +HPSSVN + + +++Y E ++ + + ++T I+
Sbjct: 1235 KSVDVTEKLACIVETAQGKAQVHPSSVNRDLQTYG--WLLYQEKIRYARVYLRETTLITP 1292
Query: 968 YALLLFGGNLIPSKTGEGIEMLGGYLHFSASKTVLELIRKLRGELDKLLNRKIEDPRVDL 1027
+++LLFGG+ I + E + + G+++F A + + ++LR +D +L +K+E+P+ +
Sbjct: 1293 FSVLLFGGD-IEVQHRERLLSVDGWIYFQAPVKIAVIFKQLRVLIDSVLRKKLENPK--M 1349
Query: 1028 SVEGKAVVSAVVELL 1042
S+E ++ + EL+
Sbjct: 1350 SLENDKILQIITELI 1364
Score = 426 (155.0 bits), Expect = 4.6e-130, Sum P(3) = 4.6e-130
Identities = 116/341 (34%), Positives = 174/341 (51%)
Query: 154 AHQLGLHFHAYNKGKALAVSKVPLPMYRPD-LDERHGSTEKELQMSIETERR----VGNL 208
A LG Y K +V ++ P YR L+ +KE +ET + + L
Sbjct: 433 AQHLGATLALYRLVKGQSVHQLLPPTYRDVWLEWSDAEKKKEELNKMETNKPRDLFIAKL 492
Query: 209 LNS----SQGNVPVNDSGIESSEVARRPKLSVKVANTISPPQSDSAK-ERLNVILKERQE 263
LN Q +++ E+SE ++ S +S K E L + +
Sbjct: 493 LNKLKQQQQQQQQHSENKKENSEDPEESWENLVSDEDFSALSLESEKAEDLEPV-RNLFR 551
Query: 264 KLKSSDSGKAMLSFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEEL 323
KL+S+ + +L R++LP FK + ++ + ++V+VV+GETG GK+TQ+P F+LE+ L
Sbjct: 552 KLQSTPKYQRLLKERQQLPVFKHRNSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLL 611
Query: 324 SSLRGAD-CNIICTQPXXXXXXXXXXXXXXERG-EN----LGETVGYQIRLESKRSAQTR 377
+ G CNI+CTQP E G EN GYQIR+ES+ S TR
Sbjct: 612 LNEWGTSKCNIVCTQPRRISAVSLATRVCDELGCENGPGGKNSLCGYQIRMESRASESTR 671
Query: 378 LLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMS 437
LL+CTTGVLLR+L ED L+ VSH++VDE+HER + DF MS
Sbjct: 672 LLYCTTGVLLRKLQEDGLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDLHLILMS 731
Query: 438 ATINADLFSKYFGNAPTVHIPGLTFPVTDLFLEDVLEKTRY 478
AT++++ FS YF + P + I G ++PV LED++E+T +
Sbjct: 732 ATVDSEKFSTYFTHCPILRISGRSYPVEVFHLEDIIEETGF 772
Score = 67 (28.6 bits), Expect = 4.6e-130, Sum P(3) = 4.6e-130
Identities = 20/61 (32%), Positives = 36/61 (59%)
Query: 93 EQRWWDPVWRAERLRQQAAEM-EVFDQNEWWGKLEQMKRGEEQEMIIKRKFSRADQQTLA 151
E+ +DP ER Q AA++ ++ +Q + KLE+ ++G+++ RKF R + +TL
Sbjct: 250 EEEKFDP---NERYLQLAAKLLDIKEQAATF-KLEKNRQGQKEAQEKIRKFQRVEMETLE 305
Query: 152 D 152
D
Sbjct: 306 D 306
>UNIPROTKB|E2QZR7 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS50088 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 GO:GO:0008026
InterPro:IPR007275 Pfam:PF04146 PROSITE:PS50882 OMA:RAFWESS
EMBL:AAEX03007702 Ensembl:ENSCAFT00000000357 Uniprot:E2QZR7
Length = 1376
Score = 857 (306.7 bits), Expect = 7.3e-130, Sum P(2) = 7.3e-130
Identities = 211/543 (38%), Positives = 315/543 (58%)
Query: 513 IDSNYKNYRASTRASLEAW----SAEQIDLGLVESTIEYICRHEGDGAILVFLTGWNDIS 568
+ +N + A R L+A+ E++DL L+ + IC AIL+FL G+++I
Sbjct: 577 VHTNGSDLSAEDRELLKAYHHSFDDEKVDLDLIMHLLYNICHGCHKCAILIFLPGYDEIV 636
Query: 569 KLLDQIKVN--KFLGDPNKFLVLPLHGSMPTINQREIFDRPPPNKRKIVLATNIAESSIT 626
L D+I + +F + +++ V LH +M T +Q+++ PP RKI+L+TNIAE+SIT
Sbjct: 637 GLRDRILFDDKRFADNTHRYQVFMLHSNMQTSDQKKVLKNPPAGVRKIILSTNIAETSIT 696
Query: 627 IDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRII 686
++DVV+V+D GK KE S+DALN + L WISKASA QR+GRAGR +PG+C++L+ R+
Sbjct: 697 VNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAVQRKGRAGRCRPGICFRLFSRLR 756
Query: 687 HDAMLPYQLPEILRTPLQELCLHIKSLQLGT--VGSFLSKALQPPDPLAVQNAIELLKTI 744
ML +Q PE+LR PLQELCLH K L + FL KA +PP L V+NA+++LKTI
Sbjct: 757 FQNMLEFQTPELLRMPLQELCLHTKLLAPVNCPIADFLMKAPEPPPALIVRNAVQMLKTI 816
Query: 745 GALDDMENLTPLGRHLCTLPVDPNIGKMLLMGAIFQCLNPALTIAAALAHRNPFVLPVNM 804
A+D E+LT LG HL LPV+P++GKM+L + +CL+P LTIA LA+R+PFVLP
Sbjct: 817 DAMDAWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCLDPILTIACTLAYRDPFVLPTQA 876
Query: 805 -QKEVDE-AKRSFAGDSCSDHIALLKAFDGYKDAKRNRRERDFCWENFLSPITLQMMEDM 862
QK ++ F + SDH+ALL+AF ++ A+ + ER FC +NFLS T++++ M
Sbjct: 877 SQKRAAMLCRKRFTAGTFSDHMALLRAFQAWQKARSDGWERAFCEKNFLSQATMEIIIGM 936
Query: 863 RSQFLDLLSDIGFVDKSKGPSA--YNRYSHDLEMVCAILCAGLYPNVVQCKRKGKRAVFY 920
R+Q L L GFV G N S + +V A L AG+YPN+V R+ V
Sbjct: 937 RTQLLGQLRASGFVRARGGGDIRDVNTNSENWAVVKAALVAGMYPNLVHVDREN--VVLT 994
Query: 921 TKEVGQVALHPS-SVNANQNNFPLPYMVYSEMVKTNNINVYDSTNISEYALLLFGGNLIP 979
+ ++ P+ +V+ + N + + Y EMVK + I DS++ SE NL
Sbjct: 995 GPKDSRIWRTPTQTVSMSVWNVCVYFFCY-EMVKVDGIP-NDSSD-SEMEDRTTA-NLAA 1050
Query: 980 SKTGEGIEMLGGYLHFSASKTVLELIRKLRGELDKLLNRKIEDPRVDLSVEGKAVVSAVV 1039
K E +L+F L+ +LR + L R++ P S +A + A++
Sbjct: 1051 LKLDE-------WLNFKLDPEAASLLLQLRQKWHSLFLRRMRAPSKPWSQVDEATIRAII 1103
Query: 1040 ELL 1042
+L
Sbjct: 1104 AVL 1106
Score = 453 (164.5 bits), Expect = 7.3e-130, Sum P(2) = 7.3e-130
Identities = 115/356 (32%), Positives = 177/356 (49%)
Query: 125 LEQMKRGEEQEMIIKRKFSRADQQTLADMAHQLGLHFHAYNKGKALAVSKVPLPMYRPDL 184
LE+ + G+++EM + ++ + ++ LGL +K K ++ L + + D
Sbjct: 52 LERFRYGDQREMEFPSSLTSTERAFIHRLSQSLGL----VSKSKGKGANRY-LTVKKKD- 105
Query: 185 DERHGSTEKELQMSIETERRVGNLLNSSQGNVPVNDSGIESSEVARRPKLSVKVANTISP 244
GS M+ + + S PV + E +E+ + + A
Sbjct: 106 ----GSETAHAMMTCNLTHNTKHAVRSLIQRFPVTNK--ERTELLPKTERGNVFAVEAEN 159
Query: 245 PQSDSAKERLNVILKERQEKLKSSDSGKAMLSFREKLPAFKMKAEFLKAVAENQVLVVSG 304
+ RLN + + K S+ SFR+ LP F+ + E +K + EN+V+++ G
Sbjct: 160 REMSKTSGRLNNGIPQIPVKRGESEFD----SFRQSLPVFEKQEEIVKIIKENKVVLIVG 215
Query: 305 ETGCGKTTQLPQFILEEELSSLRGADCNIICTQPXXXXXXXXXXXXXXERGENLGETVGY 364
ETG GKTTQ+PQF+L++ + G C I CTQP ER E +G+T+GY
Sbjct: 216 ETGSGKTTQIPQFLLDDCFKN--GIPCRIFCTQPRRLAAIAVAERVAAERRERIGQTIGY 273
Query: 365 QIRLESKR-SAQTRLLFCTTGVLLRQLVE-DPDLSCVSHLLVDEIHERGMNEDFXXXXXX 422
QIRLES+R S +T L FCT GVLLR L+ D LS V+H++VDE+HER DF
Sbjct: 274 QIRLESRRVSPKTLLTFCTNGVLLRTLMAGDSTLSTVTHVIVDEVHERDRFSDFLLTKLR 333
Query: 423 XXXXXXXXXXXXXMSATINADLFSKYFGNAPTVHIPGLTFPVTDLFLEDVLEKTRY 478
SA ++ +LF +YFG+ P ++I G F V ++FLED+L T Y
Sbjct: 334 DLLQKHPTLKLILSSAALDVNLFIRYFGSCPVIYIQGRPFEVKEMFLEDILRTTGY 389
>DICTYBASE|DDB_G0267516 [details] [associations]
symbol:dhx57 "RWD domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50908
PROSITE:PS51194 SMART:SM00490 SMART:SM00591 SMART:SM00847
dictyBase:DDB_G0267516 GO:GO:0005524 GenomeReviews:CM000150_GR
EMBL:AAFI02000003 GO:GO:0003676 InterPro:IPR015940 PROSITE:PS50030
Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K13026
RefSeq:XP_647095.1 ProteinModelPortal:Q55GT9
EnsemblProtists:DDB0235268 GeneID:8615899 KEGG:ddi:DDB_G0267516
OMA:EVHERST Uniprot:Q55GT9
Length = 1451
Score = 1095 (390.5 bits), Expect = 8.2e-130, Sum P(3) = 8.2e-130
Identities = 247/654 (37%), Positives = 388/654 (59%)
Query: 247 SDSAKERLNVILKERQEKLKSSDSGKAMLSFREKLPAFKMKAEFLKAVAENQVLVVSGET 306
++ K ++N LK ++L D G ++ RE LP FK K EFLK + ENQV+V++ ET
Sbjct: 593 NEKEKLKINKELKNEYDRLIKVDKG--VIKKRESLPVFKRKKEFLKCLQENQVVVITAET 650
Query: 307 GCGKTTQLPQFILEEELSSLRGADCNIICTQPXXXXXXXXXXXXXXERG----EN-LGET 361
GCGK+TQ+PQ+ILE +S +G++CNI+CTQP E EN +G
Sbjct: 651 GCGKSTQIPQYILESFISQEKGSECNIVCTQPRRISAIGVAERVSYEWNCGTVENSIGGL 710
Query: 362 VGYQIRLESKRSAQTRLLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFXXXXX 421
VGYQIR ESKRS TRLLFCTTG+LLR++++ ++S +SH+++DE+HER + DF
Sbjct: 711 VGYQIRNESKRSQSTRLLFCTTGILLRRILDVSNISDLSHIIIDEVHERSTDNDFLLIIL 770
Query: 422 XXXXXXXXXXXXXXMSATINADLFSKYFG--NAPTVHIPGLTFPVTDLFLEDVLEK-TRY 478
MSAT+NA + YF + IPG TFPV ++++ +VL +Y
Sbjct: 771 REIISKRKDLKIILMSATLNAKQIANYFKCTDDSIFSIPGFTFPVKNIYINEVLPLINKY 830
Query: 479 KMNSKLDSFQGNXXXXXXQDSKKDHLTALFEDVDIDSNYKNYRASTRASLEAWSAEQIDL 538
N K DS + + ++ +I +N N + S++ ++I+L
Sbjct: 831 NPNYK-DSITTTTTTTTTTTTNDTNE----DEEEILNNKLN---QLKISIDQ---KRINL 879
Query: 539 GLVESTIEYICRH--EGDGAILVFLTGWNDISKLLDQI--KVNKFL-GDPNKFLVLPLHG 593
+VES I ++ + D +ILVF+ G +DI +L ++ ++ F + +PLH
Sbjct: 880 DVVESLILHLVNGVLKKDKSILVFVPGLSDILELCSRLGKPISTFTEAICQRIWCVPLHS 939
Query: 594 SMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACL 653
S+ +Q+++F++ P + K+V+ATNIAE+SITI+DV VVDCG+ + +++++ + +
Sbjct: 940 SLSPKDQQKVFEKAPNGRVKVVIATNIAETSITIEDVEIVVDCGRVNQMTFNSITGNSVM 999
Query: 654 LPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQLPEILRTPLQELCLHIKSL 713
W SKAS QR GRAGR G+C+K++ + + + PEILRT LQ+LCLH+K
Sbjct: 1000 SEEWTSKASCRQRAGRAGRTSSGLCFKVFTKSMESQLQDQDTPEILRTSLQQLCLHVKLF 1059
Query: 714 QLG----TVGSFLSKALQPPDPLAVQNAIELLKTIGAL----DDMENLTPLGRHLCTLPV 765
T+ FL++A++PP +Q++I L +I AL + LTPLG HL +LPV
Sbjct: 1060 LKNNKNTTIQDFLNRAIEPPSSEQIQSSINELISIDALKINQQQQQELTPLGYHLASLPV 1119
Query: 766 DPNIGKMLLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIA 825
D IGKMLL G IF+CL+P LTIAA L +++PF+ P + K + + F+ + SDH
Sbjct: 1120 DVYIGKMLLFGCIFRCLDPILTIAATLNYKSPFLNPPD--KTIRPMDK-FSSPNQSDHQT 1176
Query: 826 LLKAFDGYKDAKRNRRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKS 879
L+ A++ ++ + ++ E FC EN+LS TL+ ++D++ QF+++LS+IGF+ +S
Sbjct: 1177 LINAYNSWRKSIQDGNEYQFCRENYLSIPTLRTIQDLKLQFVEILSEIGFLPQS 1230
Score = 153 (58.9 bits), Expect = 8.2e-130, Sum P(3) = 8.2e-130
Identities = 37/124 (29%), Positives = 70/124 (56%)
Query: 922 KEVGQVALHPSSVNANQNNFPLPYMVYSEMVKTNNINVYDSTNISEYALLLF--GGNLIP 979
K + +V +HP S N + + P+++Y++ VKT+ + ++ TN+S LLLF GGN+
Sbjct: 1325 KPLERVFIHPRSTNFKEGEWVYPFIIYNDKVKTSKLFLHHITNLSPLTLLLFSLGGNIEI 1384
Query: 980 SKTGEGIEMLGGYLHFSA-SKTVLELIRKLRGELDKLLNRKIEDPRVDLSVEGKAVVSAV 1038
K+ + I L +L F A S ++ L++++R + LL +KI+ P S ++ +
Sbjct: 1385 DKSYQTIS-LDKWLKFKATSGKIIVLLKEIRILFNHLLKQKIDQP--SYSTSSSIIIDII 1441
Query: 1039 VELL 1042
+L+
Sbjct: 1442 TKLV 1445
Score = 61 (26.5 bits), Expect = 8.2e-130, Sum P(3) = 8.2e-130
Identities = 9/25 (36%), Positives = 17/25 (68%)
Query: 885 YNRYSHDLEMVCAILCAGLYPNVVQ 909
YN S +++ ++LCAG+YP + +
Sbjct: 1263 YNSNSSKSKIITSVLCAGMYPKIAR 1287
>UNIPROTKB|I3LG95 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 EMBL:CU929534
Ensembl:ENSSSCT00000030291 Uniprot:I3LG95
Length = 1370
Score = 835 (299.0 bits), Expect = 2.9e-129, Sum P(3) = 2.9e-129
Identities = 195/555 (35%), Positives = 321/555 (57%)
Query: 512 DIDSNYKNYRASTRASLEAWSAEQIDLGLVESTIEYICRHEG-------DGAILVFLTGW 564
D++ Y+ Y T+ ++ + +I+L L+ + Y+ + +GA+L+FL G
Sbjct: 818 DLNPFYQKYSNRTQHAILYMNPHKINLDLILELLTYLEITDRSPQFKNVEGAVLIFLPGL 877
Query: 565 NDISKLLDQIKVNK-FLGDPNKFLVLPLHGSMPTINQREIFDRPPPNKRKIVLATNIAES 623
I +L D + ++ F + ++ V+ LH + T +Q F PP RKIVLATNIAE+
Sbjct: 878 AHIQQLYDLLSTDRRFFSE--RYKVIALHSILSTQDQAAAFTLPPQGVRKIVLATNIAET 935
Query: 624 SITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPGVCYKLYP 683
ITI DVV+V+D G+ KE Y ++++ L+ +++SKASA QR+GRAGRV+ G C+++Y
Sbjct: 936 GITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGRVRDGFCFRMYT 995
Query: 684 RIIHDAMLPYQLPEILRTPLQELCLHIKSLQLGTVGSFLSKALQPPDPLAVQNAIELLKT 743
R + + Y +PEILR PL+ELCLHI LG+ FLSKAL PP + NA+ LL+
Sbjct: 996 RERFEGFMDYSVPEILRVPLEELCLHIMKCNLGSPEDFLSKALDPPQLQVISNAMHLLRK 1055
Query: 744 IGALDDME-NLTPLGRHLCTLPVDPNIGKMLLMGAIFQCLNPALTIAAALAHRNPFVLPV 802
IGA + E LTPLG+HL LPV+ IGKML+ GAIF CL+P T+AA + ++PF P+
Sbjct: 1056 IGACELNEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLDPVATLAAVMTEKSPFTTPI 1115
Query: 803 NMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAKRN---RRERDFCWENFLSPITLQMM 859
+ E D AK + A SDH+ + A+ G+K A++ R E +C NFL+ +L +
Sbjct: 1116 GRKDEADLAKSALAMAD-SDHLTIYNAYLGWKKAQQEGGYRSEIAYCRRNFLNRTSLLTL 1174
Query: 860 EDMRSQFLDLLSDIGF-----VDKSKGPSAYNRYS-HDLEMVCAILCAGLYPNV---VQC 910
E+++ F + ++ F + SA S ++ ++ A+L AGLY NV +
Sbjct: 1175 EEIKVSFPETIAIQYFYRFYSIKTYYSSSASQTLSFQEIALLKAVLTAGLYDNVGKIIYT 1234
Query: 911 KRKG---KRAVFYTKEVGQVALHPSSVNANQNNFPLPYMVYSEMVKTNNINVYDSTNISE 967
K K A G+ +HPSSVN + + +++Y E ++ + + ++T I+
Sbjct: 1235 KSVDVTEKLACIVETAQGKAQVHPSSVNRDLQTYG--WLLYQEKIRYARVYLRETTLITP 1292
Query: 968 YALLLFGGNLIPSKTGEGIEMLGGYLHFSASKTVLELIRKLRGELDKLLNRKIEDPRVDL 1027
+++LLFGG+ I + E + + G+++F A + + ++LR +D +L +K+E+P+ +
Sbjct: 1293 FSVLLFGGD-IEVQHRERLLSVDGWIYFQAPVKIAVIFKQLRVLIDSVLRKKLENPK--M 1349
Query: 1028 SVEGKAVVSAVVELL 1042
S+E ++ + EL+
Sbjct: 1350 SLENDKILQIITELI 1364
Score = 426 (155.0 bits), Expect = 2.9e-129, Sum P(3) = 2.9e-129
Identities = 116/341 (34%), Positives = 174/341 (51%)
Query: 154 AHQLGLHFHAYNKGKALAVSKVPLPMYRPD-LDERHGSTEKELQMSIETERR----VGNL 208
A LG Y K +V ++ P YR L+ +KE +ET + + L
Sbjct: 433 AQHLGATLALYRLVKGQSVHQLLPPTYRDVWLEWSDAEKKKEELNKMETNKPRDLFIAKL 492
Query: 209 LNS----SQGNVPVNDSGIESSEVARRPKLSVKVANTISPPQSDSAK-ERLNVILKERQE 263
LN Q +++ E+SE ++ S +S K E L + +
Sbjct: 493 LNKLKQQQQQQQQHSENKKENSEDPEESWENLVSDEDFSALSLESEKAEDLEPV-RNLFR 551
Query: 264 KLKSSDSGKAMLSFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEEL 323
KL+S+ + +L R++LP FK + ++ + ++V+VV+GETG GK+TQ+P F+LE+ L
Sbjct: 552 KLQSTPKYQRLLKERQQLPVFKHRNSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLL 611
Query: 324 SSLRGAD-CNIICTQPXXXXXXXXXXXXXXERG-EN----LGETVGYQIRLESKRSAQTR 377
+ G CNI+CTQP E G EN GYQIR+ES+ S TR
Sbjct: 612 LNEWGTSKCNIVCTQPRRISAVSLATRVCDELGCENGPGGKNSLCGYQIRMESRASESTR 671
Query: 378 LLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMS 437
LL+CTTGVLLR+L ED L+ VSH++VDE+HER + DF MS
Sbjct: 672 LLYCTTGVLLRKLQEDGLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDLHLILMS 731
Query: 438 ATINADLFSKYFGNAPTVHIPGLTFPVTDLFLEDVLEKTRY 478
AT++++ FS YF + P + I G ++PV LED++E+T +
Sbjct: 732 ATVDSEKFSTYFTHCPILRISGRSYPVEVFHLEDIIEETGF 772
Score = 67 (28.6 bits), Expect = 2.9e-129, Sum P(3) = 2.9e-129
Identities = 20/61 (32%), Positives = 36/61 (59%)
Query: 93 EQRWWDPVWRAERLRQQAAEM-EVFDQNEWWGKLEQMKRGEEQEMIIKRKFSRADQQTLA 151
E+ +DP ER Q AA++ ++ +Q + KLE+ ++G+++ RKF R + +TL
Sbjct: 250 EEEKFDP---NERYLQLAAKLLDIKEQAATF-KLEKNRQGQKEAQEKIRKFQRVEMETLE 305
Query: 152 D 152
D
Sbjct: 306 D 306
>UNIPROTKB|J9PAM3 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS50088 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 GO:GO:0008026
EMBL:AAEX03007702 Ensembl:ENSCAFT00000046695 Uniprot:J9PAM3
Length = 1000
Score = 841 (301.1 bits), Expect = 2.1e-128, Sum P(2) = 2.1e-128
Identities = 182/413 (44%), Positives = 262/413 (63%)
Query: 513 IDSNYKNYRASTRASLEAW----SAEQIDLGLVESTIEYICRHEGDGAILVFLTGWNDIS 568
+ +N + A R L+A+ E++DL L+ + IC GAIL+FL G+++I
Sbjct: 576 VHTNGSDLSAEDRELLKAYHHSFDDEKVDLDLIMHLLYNICHGCDAGAILIFLPGYDEIV 635
Query: 569 KLLDQIKVN--KFLGDPNKFLVLPLHGSMPTINQREIFDRPPPNKRKIVLATNIAESSIT 626
L D+I + +F + +++ V LH +M T +Q+++ PP RKI+L+TNIAE+SIT
Sbjct: 636 GLRDRILFDDKRFADNTHRYQVFMLHSNMQTSDQKKVLKNPPAGVRKIILSTNIAETSIT 695
Query: 627 IDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRII 686
++DVV+V+D GK KE S+DALN + L WISKASA QR+GRAGR +PG+C++L+ R+
Sbjct: 696 VNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAVQRKGRAGRCRPGICFRLFSRLR 755
Query: 687 HDAMLPYQLPEILRTPLQELCLHIKSLQLGT--VGSFLSKALQPPDPLAVQNAIELLKTI 744
ML +Q PE+LR PLQELCLH K L + FL KA +PP L V+NA+++LKTI
Sbjct: 756 FQNMLEFQTPELLRMPLQELCLHTKLLAPVNCPIADFLMKAPEPPPALIVRNAVQMLKTI 815
Query: 745 GALDDMENLTPLGRHLCTLPVDPNIGKMLLMGAIFQCLNPALTIAAALAHRNPFVLPVNM 804
A+D E+LT LG HL LPV+P++GKM+L + +CL+P LTIA LA+R+PFVLP
Sbjct: 816 DAMDAWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCLDPILTIACTLAYRDPFVLPTQA 875
Query: 805 -QKEVDE-AKRSFAGDSCSDHIALLKAFDGYKDAKRNRRERDFCWENFLSPITLQMMEDM 862
QK ++ F + SDH+ALL+AF ++ A+ + ER FC +NFLS T++++ M
Sbjct: 876 SQKRAAMLCRKRFTAGTFSDHMALLRAFQAWQKARSDGWERAFCEKNFLSQATMEIIIGM 935
Query: 863 RSQFLDLLSDIGFVDKSKGPSA--YNRYSHDLEMVCAILCAGLYPNVVQCKRK 913
R+Q L L GFV G N S + +V A L AG+YPN+V R+
Sbjct: 936 RTQLLGQLRASGFVRARGGGDIRDVNTNSENWAVVKAALVAGMYPNLVHVDRE 988
Score = 440 (159.9 bits), Expect = 2.1e-128, Sum P(2) = 2.1e-128
Identities = 88/204 (43%), Positives = 122/204 (59%)
Query: 276 SFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIIC 335
SFR+ LP F+ + E +K + EN+V+++ GETG GKTTQ+PQF+L++ + G C I C
Sbjct: 187 SFRQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCFKN--GIPCRIFC 244
Query: 336 TQPXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVE-DP 394
TQP ER E +G+T+GYQIRLES+ S +T L FCT GVLLR L+ D
Sbjct: 245 TQPRRLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMAGDS 304
Query: 395 DLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGNAPT 454
LS V+H++VDE+HER DF SA ++ +LF +YFG+ P
Sbjct: 305 TLSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPV 364
Query: 455 VHIPGLTFPVTDLFLEDVLEKTRY 478
++I G F V ++FLED+L T Y
Sbjct: 365 IYIQGRPFEVKEMFLEDILRTTGY 388
Score = 156 (60.0 bits), Expect = 2.0e-98, Sum P(2) = 2.0e-98
Identities = 50/197 (25%), Positives = 91/197 (46%)
Query: 125 LEQMKRGEEQEMIIKRKFSRADQQTLADMAHQLGLHFHAYNKGKALAVSKVPLPMYRPDL 184
LE+ + G+++EM + ++ + ++ LGL +K K ++ L + + D
Sbjct: 52 LERFRYGDQREMEFPSSLTSTERAFIHRLSQSLGL----VSKSKGKGANRY-LTVKKKD- 105
Query: 185 DERHGSTEKELQMSIETERRVGNLLNSSQGNVPVNDSGIESSEVARRPKLSVKVANTISP 244
GS M+ + + S PV + E +E+ + + A
Sbjct: 106 ----GSETAHAMMTCNLTHNTKHAVRSLIQRFPVTNK--ERTELLPKTERGNVFAVEAEN 159
Query: 245 PQSDSAKERLNVILKERQEKLKSSDSGKAMLSFREKLPAFKMKAEFLKAVAENQVLVVSG 304
+ RLN + + K S+ SFR+ LP F+ + E +K + EN+V+++ G
Sbjct: 160 REMSKTSGRLNNGIPQIPVKRGESEFD----SFRQSLPVFEKQEEIVKIIKENKVVLIVG 215
Query: 305 ETGCGKTTQLPQFILEE 321
ETG GKTTQ+PQF+L++
Sbjct: 216 ETGSGKTTQIPQFLLDD 232
>TAIR|locus:2052841 [details] [associations]
symbol:HVT1 "helicase in vascular tissue and tapetum"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA;ISS] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;ISS] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0000226 "microtubule
cytoskeleton organization" evidence=RCA] [GO:0000911 "cytokinesis
by cell plate formation" evidence=RCA] InterPro:IPR001374
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF01424 Pfam:PF04408 PROSITE:PS51061
PROSITE:PS51194 SMART:SM00393 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 EMBL:CP002685 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 IPI:IPI00521007
RefSeq:NP_850154.2 UniGene:At.19969 ProteinModelPortal:F4INY4
SMR:F4INY4 PRIDE:F4INY4 EnsemblPlants:AT2G30800.1 GeneID:817631
KEGG:ath:AT2G30800 OMA:PYNNVST Uniprot:F4INY4
Length = 1299
Score = 839 (300.4 bits), Expect = 3.3e-128, Sum P(2) = 3.3e-128
Identities = 182/461 (39%), Positives = 272/461 (59%)
Query: 534 EQIDLGLVESTIEYICRHEGDGAILVFLTGWNDISKLLDQIKVNKFLGDPNKFLVLPLHG 593
EQ+D+ L++ + IC DGAILVFL GW+DI+K ++ N F D KF ++ LH
Sbjct: 531 EQVDVSLIQQLMRKICGDSEDGAILVFLPGWDDINKTRQRLLENPFFADSAKFDIICLHS 590
Query: 594 SMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACL 653
+P Q+++F+RPPP RKIVLATNIAES++TIDDVVYV+D G+ KE SYD N ++ L
Sbjct: 591 MVPAGEQKKVFNRPPPGCRKIVLATNIAESAVTIDDVVYVIDSGRMKEKSYDPYNNVSTL 650
Query: 654 LPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQLPEILRTPLQELCLHIKSL 713
SW+SKA+A QR+GRAGR QPG+CY LY R+ +M +++PEI R P++ELCL +K L
Sbjct: 651 QSSWVSKANAKQRQGRAGRCQPGICYHLYSRLRAASMPDFKVPEIKRMPVEELCLQVKIL 710
Query: 714 QLGT-VGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGKM 772
FL K L PP ++ NA+ +L+ IGAL E LT LG LPV P I KM
Sbjct: 711 DPNCKTNDFLQKLLDPPVDQSIANALSILQDIGALTPQEELTELGEKFGHLPVHPLISKM 770
Query: 773 LLMGAIFQCLNPALTIAAALAHRNPFVLPVN-MQKEVDEAKRSFAGDSC---SDHIALLK 828
L + CL+PALT+A A ++ PF +P++ ++++ A + C SDH+A++
Sbjct: 771 LFFAVLVNCLDPALTLACAADYKEPFTMPMSPVERQKAAAAKLELASLCGGDSDHLAVVA 830
Query: 829 AFDGYKDAKRNRRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRY 888
AF+ +K+AK +FC + F+SP ++M++ MRSQ L G + + N
Sbjct: 831 AFECWKNAKGRGLSAEFCSQYFVSPSAMKMLDQMRSQLESELKRHGIIPNDISSCSQN-- 888
Query: 889 SHDLEMVCAILCAGLYPNVVQ-CKRKG--KRAVFYTKEVGQVALHPSSVNANQNN--FPL 943
S D ++ A+L GLYP V + C G +R + T +V +H S N N ++ +
Sbjct: 889 SRDPGILRAVLAVGLYPMVGRLCPAFGNNRRTIVETASGAKVRVHSLSNNFNLSSKKYDE 948
Query: 944 PYMVYSEMVKTNN-INVYDSTNISEYALLLFGGNLIPSKTG 983
+V+ E+ + + +++ + T + LLL + + TG
Sbjct: 949 SLLVFDEITRGDGGMHIRNCTVARDLPLLLISTEIAVAPTG 989
Score = 453 (164.5 bits), Expect = 3.3e-128, Sum P(2) = 3.3e-128
Identities = 98/232 (42%), Positives = 131/232 (56%)
Query: 245 PQSDSAKERLNVILKERQEKLKSSDSGKAMLSFREKLPAFKMKAEFLKAVAENQVLVVSG 304
PQ S++E L + +LK + K + R KLP K AV NQV+++SG
Sbjct: 153 PQI-SSEEILEKVAS-LSSRLKKDKALKEITKLRSKLPITSFKDAITSAVESNQVILISG 210
Query: 305 ETGCGKTTQLPQFILEEELSSLRGADCNIICTQPXXXXXXXXXXXXXXERGENLGETVGY 364
ETGCGKTTQ+PQ++L+ SS R C I+CTQP ERGE++GE +GY
Sbjct: 211 ETGCGKTTQVPQYLLDHMWSSKRET-CKIVCTQPRRISAMSVSERISCERGESIGENIGY 269
Query: 365 QIRLESKRSAQTRLLFCTTGVLLRQLVEDPDLSCVS---HLLVDEIHERGMNEDFXXXXX 421
++RL+SK + ++FCT G+LLR LV +S VS H++VDEIHER DF
Sbjct: 270 KVRLQSKGGRHSSVVFCTNGILLRVLVGKGSVSSVSDITHIIVDEIHERDCYSDFMLAII 329
Query: 422 XXXXXXXXXXXXXXMSATINADLFSKYFGNAPTVHIPGLTFPVTDLFLEDVL 473
MSAT++A+ FS YFG P V +PG T+PV L+LEDVL
Sbjct: 330 RDLLPSNPHLRLILMSATLDAERFSGYFGGCPVVRVPGFTYPVRTLYLEDVL 381
>FB|FBgn0030246 [details] [associations]
symbol:CG1582 species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001650 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00642 Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014298 GO:GO:0008270 GO:GO:0006200 GO:GO:0003676
GO:GO:0004386 Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 KO:K13026 EMBL:AY119481
RefSeq:NP_572663.1 UniGene:Dm.11248 SMR:Q9VZ55
EnsemblMetazoa:FBtr0073403 GeneID:32021 KEGG:dme:Dmel_CG1582
UCSC:CG1582-RA FlyBase:FBgn0030246 InParanoid:Q9VZ55 OMA:IFQCLDS
OrthoDB:EOG4RJDGG ChiTaRS:CG1582 GenomeRNAi:32021 NextBio:776414
Uniprot:Q9VZ55
Length = 1288
Score = 711 (255.3 bits), Expect = 2.0e-127, Sum P(3) = 2.0e-127
Identities = 160/372 (43%), Positives = 231/372 (62%)
Query: 517 YKNYRASTRASLEAWSAEQIDLGLVESTIEYICR--HEG--DGAILVFLTGWNDISKLLD 572
Y Y T S+ I+ L+ES ++YI H+ +G IL+FL G+ +I + D
Sbjct: 711 YAEYSKPTCKSIYLMEPMTINPELIESVLKYIVEGSHDWPREGTILIFLPGFGEIQSVHD 770
Query: 573 QIKVNK-FLGDPNKFLVLPLHGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVV 631
+ N F KF+++PLH ++ +Q +F + PP KRKIVL+TNIAE+S+TIDD V
Sbjct: 771 SLLDNALFSPRAGKFILVPLHSALSGEDQALVFKKAPPGKRKIVLSTNIAETSVTIDDCV 830
Query: 632 YVVDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDA-M 690
+VVDCG KE +D+ + L W+S+A+A QR+GRAGRV PGVC LY + +
Sbjct: 831 FVVDCGLMKEKCFDSNRNMESLDLVWVSRANAKQRKGRAGRVMPGVCIHLYTSYRYQYHI 890
Query: 691 LPYQLPEILRTPLQELCLHIKSLQLGTVGSFLS---KALQPPDPLAVQNAIELLKTIGAL 747
L +PEI R PL+++ L IK+LQ + LS + L+ P +V A+ L+ +GAL
Sbjct: 891 LAQPVPEIQRVPLEQIVLRIKTLQTFASRNTLSVLLETLEAPTEDSVLGALTRLRDVGAL 950
Query: 748 DDMENLTPLGRHLCTLPVDPNIGKMLLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKE 807
D + LTPLG HL LPVD IGK++L GAIFQCL+ LTIAA L++++PFV P+N + E
Sbjct: 951 DAEDQLTPLGHHLAALPVDVRIGKLMLYGAIFQCLDSVLTIAACLSNKSPFVSPLNKRTE 1010
Query: 808 VDEAKRSFAGDSCSDHIALLKAFDGYKD-AKRNR--RERDFCWENFLSPITLQMMEDMRS 864
D+ KR FA + SDH+ +L A+ + D A+R R++ E+FLS TL+ + D++
Sbjct: 1011 ADKCKRMFALGN-SDHLTVLNAYRKWLDVARRGNYAASRNYASEHFLSLNTLETIADLKY 1069
Query: 865 QFLDLLSDIGFV 876
Q+L+LL IGFV
Sbjct: 1070 QYLELLVSIGFV 1081
Score = 465 (168.7 bits), Expect = 2.0e-127, Sum P(3) = 2.0e-127
Identities = 121/343 (35%), Positives = 170/343 (49%)
Query: 149 TLADMAHQLGLHF--HAYNKGKALAVSKVPLPMYRPDLDERHGSTEKELQMS-IETERRV 205
T D+ H+L L + H Y + K + +P DL + + L S + +R
Sbjct: 319 TCHDIPHELRLRYARHLYKEAKEICRDGIPCVYSICDLLQSNEQLAGRLDTSAFPSPKR- 377
Query: 206 GNLLNSSQGNVPVN-DSGIESSEVARRPKLSVKVANTISPPQSDSAKERLNVILKERQEK 264
+L VN D+ S N ++ A+ R N L ++ +
Sbjct: 378 -SLFYDEPAGGGVNPDAEHHQSPKPSHYARGQTSRNDGGHQRNVEAQTRENRRLLQQFVE 436
Query: 265 LKSSDSGKAMLSFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEE--- 321
+ + + ++ R++LPAF L + + V+V+SGETGCGK+TQ+PQFIL+
Sbjct: 437 RRKEERYQKIIDGRKQLPAFAEIERILALIESSPVVVISGETGCGKSTQVPQFILDNWFF 496
Query: 322 ---ELSSLRGAD-CNIICTQPXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTR 377
+L + IICTQP ER + +G+ VGYQIRLE+K S TR
Sbjct: 497 RALQLPAKENLPHVEIICTQPRRLSAIGVAERVAAERLDRIGQLVGYQIRLENKVSQSTR 556
Query: 378 LLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMS 437
L FCTTG+LLR+L DP L V+H++VDE+HER DF MS
Sbjct: 557 LSFCTTGILLRRLASDPLLGSVTHVIVDEVHERSEESDFLLLILKNLLRERKDLKVILMS 616
Query: 438 ATINADLFSKYFGNAPTVHIPGLTFPVTDLFLEDVLEKTRYKM 480
AT+NA LFS YFG AP + IPG TFPV LFLED+LE + + M
Sbjct: 617 ATLNAALFSDYFGGAPVLDIPGRTFPVQQLFLEDILEMSDFVM 659
Score = 321 (118.1 bits), Expect = 4.7e-80, Sum P(3) = 4.7e-80
Identities = 84/229 (36%), Positives = 126/229 (55%)
Query: 720 SFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGKMLLMGAIF 779
S L + L+ P +V A+ L+ +GALD + LTPLG HL LPVD IGK++L GAIF
Sbjct: 923 SVLLETLEAPTEDSVLGALTRLRDVGALDAEDQLTPLGHHLAALPVDVRIGKLMLYGAIF 982
Query: 780 QCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAKRN 839
QCL+ LTIAA L++++PFV P+N + E D+ KR FA + L A+R
Sbjct: 983 QCLDSVLTIAACLSNKSPFVSPLNKRTEADKCKRMFALGNSDHLTVLNAYRKWLDVARRG 1042
Query: 840 R--RERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVD----KSKGPSAYN------- 886
R++ E+FLS TL+ + D++ Q+L+LL IGFV + + + N
Sbjct: 1043 NYAASRNYASEHFLSLNTLETIADLKYQYLELLVSIGFVPIDVPRRRKNACDNILTLTGV 1102
Query: 887 RYSHDLE---MVCAILCAGLYPNVVQCKRKGKRAVFYTKEVGQVALHPS 932
+H+ + ++ ++LCA LYPN+V+ + V+ G V PS
Sbjct: 1103 EQNHNGDNNRLLTSLLCAALYPNIVKIMTPDR--VYIQTAGGAVPREPS 1149
Score = 158 (60.7 bits), Expect = 2.0e-127, Sum P(3) = 2.0e-127
Identities = 41/130 (31%), Positives = 73/130 (56%)
Query: 919 FYTKEVGQVALHPSSVNANQNNFPLPYMVYSEMVKTNNINVYDSTNISEYALLLFGGN-- 976
F T+ G V +HPSSVN+ + F P++V+ E V+T+ I + D + + A++LF G+
Sbjct: 1155 FKTRGDGYVKIHPSSVNSQVSVFQAPFLVFQEKVRTSAIYIRDCSMLPLIAMVLFAGSDF 1214
Query: 977 LIPSKTGEGIEML-GGYLHFSASKT-VLELIRKLRGELDKLLNRKIEDPRVDL--SVEGK 1032
+ G+ + +L G++ A E+++ LR E+ KLL KI DP ++L G
Sbjct: 1215 KVELHDGDFLFLLESGWIILKAHDLETAEMVQCLRAEMIKLLEEKIRDPCLNLLHHKNGC 1274
Query: 1033 AVVSAVVELL 1042
+++ +V L+
Sbjct: 1275 RMIANIVHLI 1284
Score = 38 (18.4 bits), Expect = 8.6e-39, Sum P(2) = 8.6e-39
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 1006 RKLRGELDKLLNRKIEDPRVDLSVEGKA 1033
RKL+ + ++L R++E D+ G+A
Sbjct: 667 RKLKKQEQEILERELE--YADVQASGEA 692
>UNIPROTKB|F1MNU7 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS50088 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 CTD:64848 OMA:RAFWESS EMBL:DAAA02027655
IPI:IPI00689346 RefSeq:NP_001179740.1 UniGene:Bt.24975
ProteinModelPortal:F1MNU7 Ensembl:ENSBTAT00000018745 GeneID:541024
KEGG:bta:541024 NextBio:20878969 Uniprot:F1MNU7
Length = 1429
Score = 846 (302.9 bits), Expect = 4.3e-127, Sum P(2) = 4.3e-127
Identities = 184/422 (43%), Positives = 266/422 (63%)
Query: 521 RASTRASLEAWSAEQIDLGLVESTIEYICRHEGDGAILVFLTGWNDISKLLDQIKVN--K 578
R +A ++ E++DL L+ + IC GAIL+FL G+++I L D+I + +
Sbjct: 588 RELLKAYHHSFDDEKVDLDLIMHLLYNICHSCEAGAILIFLPGYDEIVGLRDRILFDDKR 647
Query: 579 FLGDPNKFLVLPLHGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGK 638
F + +++ V LH +M T +Q+++ PP RKI+L+TNIAE+SIT++DVV+V+D GK
Sbjct: 648 FAENAHRYQVFMLHSNMQTSDQKKVLKNPPAGVRKIILSTNIAETSITVNDVVFVIDSGK 707
Query: 639 AKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQLPEI 698
KE S+DALN + L WISKASA QR+GRAGR +PG+C++L+ R+ ML +Q PE+
Sbjct: 708 VKEKSFDALNFVTMLKMVWISKASAIQRKGRAGRCRPGICFRLFSRLRFQNMLEFQTPEL 767
Query: 699 LRTPLQELCLHIKSLQLGT--VGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPL 756
LR PLQELCLH K L + FL KA +PP L V+NA+++LKTI A+D E+LT L
Sbjct: 768 LRMPLQELCLHTKLLAPVNCAIADFLMKAPEPPPALIVRNAVQMLKTIDAMDAWEDLTEL 827
Query: 757 GRHLCTLPVDPNIGKMLLMGAIFQCLNPALTIAAALAHRNPFVLPVNM-QKEVDE-AKRS 814
G HL LPV+P++GKM+L + +CL+P LTIA LA+R+PFVLP QK ++
Sbjct: 828 GYHLADLPVEPHLGKMVLCAVVLKCLDPILTIACTLAYRDPFVLPTQASQKRAAMLCRKR 887
Query: 815 FAGDSCSDHIALLKAFDGYKDAKRNRRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIG 874
F + SDH+ALL+AF ++ A+ + ER FC +NFLS T++++ MR+Q L L G
Sbjct: 888 FTAGTFSDHMALLRAFQAWQKARSDGWERAFCEKNFLSQATMEIIIGMRTQLLGQLRASG 947
Query: 875 FVDKSKGPSA--YNRYSHDLEMVCAILCAGLYPNVVQCKRKGKRAVFYTKEVGQVALHPS 932
FV G N S + +V A L AG+YP++V R+ V + +V HP+
Sbjct: 948 FVRARGGGDIRDVNTNSENWAVVKAALVAGMYPHLVHVDREN--VVLAGPKEKKVRFHPT 1005
Query: 933 SV 934
SV
Sbjct: 1006 SV 1007
Score = 440 (159.9 bits), Expect = 4.3e-127, Sum P(2) = 4.3e-127
Identities = 88/204 (43%), Positives = 122/204 (59%)
Query: 276 SFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIIC 335
SFR+ LP F+ + E +K + EN+V+++ GETG GKTTQ+PQF+L++ + G C I C
Sbjct: 187 SFRQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCFKN--GIPCRIFC 244
Query: 336 TQPXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVE-DP 394
TQP ER E +G+T+GYQIRLES+ S +T L FCT GVLLR L+ D
Sbjct: 245 TQPRRLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMAGDS 304
Query: 395 DLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGNAPT 454
LS V+H++VDE+HER DF SA ++ +LF +YFG+ P
Sbjct: 305 TLSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPV 364
Query: 455 VHIPGLTFPVTDLFLEDVLEKTRY 478
++I G F V ++FLED+L T Y
Sbjct: 365 IYIQGRPFEVKEMFLEDILRTTGY 388
Score = 186 (70.5 bits), Expect = 2.0e-51, Sum P(2) = 2.0e-51
Identities = 56/182 (30%), Positives = 91/182 (50%)
Query: 812 KRSFAGDSCSDHIALLKAFDGYKDAKRNRRERDFCWENFLSPITLQMMEDMRSQFLDLLS 871
++ F + SDH+ALL+AF ++ A+ + ER FC +NFLS T++++ MR+Q L L
Sbjct: 885 RKRFTAGTFSDHMALLRAFQAWQKARSDGWERAFCEKNFLSQATMEIIIGMRTQLLGQLR 944
Query: 872 DIGFVDKSKGPSA--YNRYSHDLEMVCAILCAGLYPNVVQCKRKGKRAVFYTKEVGQVAL 929
GFV G N S + +V A L AG+YP++V R+ V + +V
Sbjct: 945 ASGFVRARGGGDIRDVNTNSENWAVVKAALVAGMYPHLVHVDREN--VVLAGPKEKKVRF 1002
Query: 930 HPSSV----------NANQNN-----FPLPYMVYSEMVKTNNI-NVYDSTNISEYALLLF 973
HP+SV AN P +++Y EM + + I N+ + ++ +L+F
Sbjct: 1003 HPTSVLSQPQYKKIPPANGQTAAIQALPTDWLIYDEMTRAHRIANIRCCSAVTPVTVLVF 1062
Query: 974 GG 975
G
Sbjct: 1063 CG 1064
Score = 156 (60.0 bits), Expect = 4.2e-97, Sum P(2) = 4.2e-97
Identities = 50/197 (25%), Positives = 91/197 (46%)
Query: 125 LEQMKRGEEQEMIIKRKFSRADQQTLADMAHQLGLHFHAYNKGKALAVSKVPLPMYRPDL 184
LE+ + G+++EM + ++ + ++ LGL +K K ++ L + + D
Sbjct: 52 LERFRYGDQREMEFPSSLTSTERAFIHRLSQSLGL----VSKSKGKGANRY-LTVKKKD- 105
Query: 185 DERHGSTEKELQMSIETERRVGNLLNSSQGNVPVNDSGIESSEVARRPKLSVKVANTISP 244
GS M+ + + S PV + E +E+ + + A
Sbjct: 106 ----GSETAHAMMTCNLTHNTKHAVRSLIQRFPVTNK--ERTELLPKTERGNVFAVEAEN 159
Query: 245 PQSDSAKERLNVILKERQEKLKSSDSGKAMLSFREKLPAFKMKAEFLKAVAENQVLVVSG 304
+ RLN + + K S+ SFR+ LP F+ + E +K + EN+V+++ G
Sbjct: 160 REMSKTSGRLNNGIPQIPVKRGESEFD----SFRQSLPVFEKQEEIVKIIKENKVVLIVG 215
Query: 305 ETGCGKTTQLPQFILEE 321
ETG GKTTQ+PQF+L++
Sbjct: 216 ETGSGKTTQIPQFLLDD 232
>UNIPROTKB|Q08211 [details] [associations]
symbol:DHX9 "ATP-dependent RNA helicase A" species:9606
"Homo sapiens" [GO:0003725 "double-stranded RNA binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IEA] [GO:0034605 "cellular response to heat" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005813
"centrosome" evidence=IDA] [GO:0070937 "CRD-mediated mRNA stability
complex" evidence=IDA] [GO:0070934 "CRD-mediated mRNA
stabilization" evidence=IMP] [GO:0030529 "ribonucleoprotein
complex" evidence=IDA] [GO:0003724 "RNA helicase activity"
evidence=TAS] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=TAS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=TAS] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0001085 "RNA polymerase II transcription factor binding"
evidence=IPI] Reactome:REACT_71 InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 GO:GO:0005813 GO:GO:0005654 GO:GO:0034605
GO:GO:0005730 GO:GO:0003677 Reactome:REACT_1675 Gene3D:3.30.160.20
EMBL:CH471067 GO:GO:0030529 GO:GO:0003725 GO:GO:0004003
GO:GO:0000398 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000247063 CTD:1660 HOVERGEN:HBG039429 KO:K13184
OrthoDB:EOG4HHP1J GO:GO:0070937 OMA:DDWIRLQ EMBL:L13848 EMBL:U03643
EMBL:Y10658 EMBL:AB451248 EMBL:AB451372 EMBL:AL355999 EMBL:AL662837
EMBL:BC025245 EMBL:BC058896 EMBL:BC107881 EMBL:BC137136
IPI:IPI00844578 RefSeq:NP_001348.2 UniGene:Hs.191518 PDB:3LLM
PDBsum:3LLM ProteinModelPortal:Q08211 SMR:Q08211 DIP:DIP-31504N
IntAct:Q08211 MINT:MINT-5000572 STRING:Q08211 PhosphoSite:Q08211
DMDM:116241330 SWISS-2DPAGE:Q08211 PaxDb:Q08211 PRIDE:Q08211
Ensembl:ENST00000367549 GeneID:1660 KEGG:hsa:1660 UCSC:uc001gpr.3
GeneCards:GC01P182808 H-InvDB:HIX0001404 H-InvDB:HIX0149309
HGNC:HGNC:2750 HPA:CAB011819 HPA:HPA028050 MIM:603115
neXtProt:NX_Q08211 PharmGKB:PA27232 InParanoid:Q08211
GenomeRNAi:1660 NextBio:6832 PMAP-CutDB:Q08211 ArrayExpress:Q08211
Bgee:Q08211 CleanEx:HS_DHX9 Genevestigator:Q08211
GermOnline:ENSG00000135829 GO:GO:0070934 Uniprot:Q08211
Length = 1270
Score = 1200 (427.5 bits), Expect = 5.1e-122, P = 5.1e-122
Identities = 288/802 (35%), Positives = 435/802 (54%)
Query: 239 ANTISPPQSDSAKERLNVILK-ERQEKLKSSDSGKAMLSFREKLPAFKMKAEFLKAVAEN 297
+N P + + E++++ LK E +L+ +A+L RE LP K ++E L+A+++N
Sbjct: 345 SNIDEGPLAFATPEQISMDLKNELMYQLEQDHDLQAILQERELLPVKKFESEILEAISQN 404
Query: 298 QVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQPXXXXXXXXXXXXXXERGEN 357
V+++ G TGCGKTTQ+PQFIL++ + + R A+CNI+ TQP ERGE
Sbjct: 405 SVVIIRGATGCGKTTQVPQFILDDFIQNDRAAECNIVVTQPRRISAVSVAERVAFERGEE 464
Query: 358 LGETVGYQIRLES-KRSAQTRLLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDF 416
G++ GY +R ES ++FCT GVLLR+L + + +SH++VDEIHER +N DF
Sbjct: 465 PGKSCGYSVRFESILPRPHASIMFCTVGVLLRKL--EAGIRGISHVIVDEIHERDINTDF 522
Query: 417 XXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGNAPTVHIPGLTFPVTDLFLEDVLEKT 476
MSATI+ +F +YF N P + + G T+PV + FLED ++ T
Sbjct: 523 LLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCPIIEVYGRTYPVQEYFLEDCIQMT 582
Query: 477 RYKMNSKLDSFQGNXXXXXXQDSKKDHLTALFEDVDIDSNY---KNYRASTRASLEAWSA 533
+ K KKD ED D + N Y TR S+ +
Sbjct: 583 HFVPPPK-------------DKKKKDKDDDGGEDDDANCNLICGDEYGPETRLSMSQLNE 629
Query: 534 EQIDLGLVESTIEYICRHEGDGAILVFLTGWNDISKLLDQIKVNKFLGDPNKFLVLPLHG 593
++ L+E+ ++YI GA+LVFL GWN I + +++N G +++ +LPLH
Sbjct: 630 KETPFELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHFGS-HRYQILPLHS 688
Query: 594 SMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACL 653
+P QR++FD P K++L+TNIAE+SITI+DVVYV+D K K + A N +
Sbjct: 689 QIPREEQRKVFDPVPVGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNY 748
Query: 654 LPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQLPEILRTPLQELCLHIKSL 713
W SK + QR+GRAGRV+PG C+ L R + + + PE+ RTPL E+ L IK L
Sbjct: 749 ATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFERLETHMTPEMFRTPLHEIALSIKLL 808
Query: 714 QLGTVGSFLSKALQPPDPL-AVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGKM 772
+LG +G FL+KA++PP PL AV A L+ + ALD + LTPLGR L LP++P GKM
Sbjct: 809 RLGGIGQFLAKAIEPP-PLDAVIEAEHTLRELDALDANDELTPLGRILAKLPIEPRFGKM 867
Query: 773 LLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDG 832
++MG IF + TIAAA PF+ N K + R+FAG+ SDH+ALL F
Sbjct: 868 MIMGCIFYVGDAICTIAAATCFPEPFI---NEGKRLGYIHRNFAGNRFSDHVALLSVFQA 924
Query: 833 YKDAKRNRRERD--FCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYSH 890
+ DA+ E + FC L+ TL+M + + Q ++L + GF + +
Sbjct: 925 WDDARMGGEEAEIRFCEHKRLNMATLRMTWEAKVQLKEILINSGFPEDCLLTQVFTNTGP 984
Query: 891 D--LEMVCAILCAGLYPNVVQCKRKGKRAVFYTKEVGQVAL-HPSSVN---ANQN-NFPL 943
D L++V ++L G+YPNV C K KR + T+ G+ AL H SSVN ++Q+ +P
Sbjct: 985 DNNLDVVISLLAFGVYPNV--CYHKEKRKILTTE--GRNALIHKSSVNCPFSSQDMKYPS 1040
Query: 944 PYMVYSEMVKTNNINVYDSTNISEYALLLFGGNLIPSKTGEGIEMLGGYLHFSASKTVLE 1003
P+ V+ E ++T I+ T ++ LLLF + S G+ I ++ ++ S
Sbjct: 1041 PFFVFGEKIRTRAISAKGMTLVTPLQLLLFASKKVQSD-GQ-IVLVDDWIKLQISHEAAA 1098
Query: 1004 LIRKLRGELDKLLNRKIEDPRV 1025
I LR ++ L+ + P +
Sbjct: 1099 CITGLRAAMEALVVEVTKQPAI 1120
>UNIPROTKB|Q5R874 [details] [associations]
symbol:DHX9 "ATP-dependent RNA helicase A" species:9601
"Pongo abelii" [GO:0030529 "ribonucleoprotein complex"
evidence=ISS] [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=ISS] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 GO:GO:0005524 GO:GO:0005813
GO:GO:0034605 GO:GO:0005730 GO:GO:0003677 Gene3D:3.30.160.20
GO:GO:0030529 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:1660 HOVERGEN:HBG039429 KO:K13184
OrthoDB:EOG4HHP1J GO:GO:0070937 OMA:DDWIRLQ GO:GO:0070934
EMBL:CR859880 RefSeq:XP_002809755.1 UniGene:Pab.8432
ProteinModelPortal:Q5R874 SMR:Q5R874 PRIDE:Q5R874
Ensembl:ENSPPYT00000000510 GeneID:100449914 KEGG:pon:100449914
InParanoid:Q5R874 Uniprot:Q5R874
Length = 1269
Score = 1200 (427.5 bits), Expect = 5.1e-122, P = 5.1e-122
Identities = 288/802 (35%), Positives = 435/802 (54%)
Query: 239 ANTISPPQSDSAKERLNVILK-ERQEKLKSSDSGKAMLSFREKLPAFKMKAEFLKAVAEN 297
+N P + + E++++ LK E +L+ +A+L RE LP K ++E L+A+++N
Sbjct: 345 SNIDEGPLAFATPEQISMDLKNELMYQLEQDHDLQAILQERELLPVKKFESEILEAISQN 404
Query: 298 QVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQPXXXXXXXXXXXXXXERGEN 357
V+++ G TGCGKTTQ+PQFIL++ + + R A+CNI+ TQP ERGE
Sbjct: 405 SVVIIRGATGCGKTTQVPQFILDDFIQNDRAAECNIVVTQPRRISAVSVAERVAFERGEE 464
Query: 358 LGETVGYQIRLES-KRSAQTRLLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDF 416
G++ GY +R ES ++FCT GVLLR+L + + +SH++VDEIHER +N DF
Sbjct: 465 PGKSCGYSVRFESILPRPHASIMFCTVGVLLRKL--EAGIRGISHVIVDEIHERDINTDF 522
Query: 417 XXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGNAPTVHIPGLTFPVTDLFLEDVLEKT 476
MSATI+ +F +YF N P + + G T+PV + FLED ++ T
Sbjct: 523 LLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCPIIEVYGRTYPVQEYFLEDCIQMT 582
Query: 477 RYKMNSKLDSFQGNXXXXXXQDSKKDHLTALFEDVDIDSNY---KNYRASTRASLEAWSA 533
+ K KKD ED D + N Y TR S+ +
Sbjct: 583 HFVPPPK-------------DKKKKDKDDDGGEDDDANCNLICGDEYGPETRLSMSQLNE 629
Query: 534 EQIDLGLVESTIEYICRHEGDGAILVFLTGWNDISKLLDQIKVNKFLGDPNKFLVLPLHG 593
++ L+E+ ++YI GA+LVFL GWN I + +++N G +++ +LPLH
Sbjct: 630 KETPFELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHFGS-HRYQILPLHS 688
Query: 594 SMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACL 653
+P QR++FD P K++L+TNIAE+SITI+DVVYV+D K K + A N +
Sbjct: 689 QIPREEQRKVFDPVPVGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNY 748
Query: 654 LPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQLPEILRTPLQELCLHIKSL 713
W SK + QR+GRAGRV+PG C+ L R + + + PE+ RTPL E+ L IK L
Sbjct: 749 ATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFERLETHMTPEMFRTPLHEIALSIKLL 808
Query: 714 QLGTVGSFLSKALQPPDPL-AVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGKM 772
+LG +G FL+KA++PP PL AV A L+ + ALD + LTPLGR L LP++P GKM
Sbjct: 809 RLGGIGQFLAKAIEPP-PLDAVIEAEHTLRELDALDANDELTPLGRILAKLPIEPRFGKM 867
Query: 773 LLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDG 832
++MG IF + TIAAA PF+ N K + R+FAG+ SDH+ALL F
Sbjct: 868 MIMGCIFYVGDAICTIAAATCFPEPFI---NEGKRLGYIHRNFAGNRFSDHVALLSVFQA 924
Query: 833 YKDAKRNRRERD--FCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYSH 890
+ DA+ E + FC L+ TL+M + + Q ++L + GF + +
Sbjct: 925 WDDARMGGEEAEIRFCEHKRLNMATLRMTWEAKVQLKEILINSGFPEDCLLTQVFTNTGP 984
Query: 891 D--LEMVCAILCAGLYPNVVQCKRKGKRAVFYTKEVGQVAL-HPSSVN---ANQN-NFPL 943
D L++V ++L G+YPNV C K KR + T+ G+ AL H SSVN ++Q+ +P
Sbjct: 985 DNNLDVVISLLAFGVYPNV--CYHKEKRKILTTE--GRNALIHKSSVNCPFSSQDMKYPS 1040
Query: 944 PYMVYSEMVKTNNINVYDSTNISEYALLLFGGNLIPSKTGEGIEMLGGYLHFSASKTVLE 1003
P+ V+ E ++T I+ T ++ LLLF + S G+ I ++ ++ S
Sbjct: 1041 PFFVFGEKIRTRAISAKGMTLVTPLQLLLFASKKVQSD-GQ-IVLVDDWIKLQISHEAAA 1098
Query: 1004 LIRKLRGELDKLLNRKIEDPRV 1025
I LR ++ L+ + P +
Sbjct: 1099 CITGLRAAMEALVVEVTKQPAI 1120
>UNIPROTKB|Q68FK8 [details] [associations]
symbol:dhx9 "ATP-dependent RNA helicase A-like protein"
species:8355 "Xenopus laevis" [GO:0070937 "CRD-mediated mRNA
stability complex" evidence=ISS] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 Gene3D:3.30.160.20
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:1660
HOVERGEN:HBG039429 KO:K13184 GO:GO:0070937 EMBL:BC079701
RefSeq:NP_001087383.1 UniGene:Xl.55621 ProteinModelPortal:Q68FK8
SMR:Q68FK8 PRIDE:Q68FK8 GeneID:447207 KEGG:xla:447207
Xenbase:XB-GENE-967780 Uniprot:Q68FK8
Length = 1262
Score = 1199 (427.1 bits), Expect = 6.5e-122, P = 6.5e-122
Identities = 287/798 (35%), Positives = 434/798 (54%)
Query: 239 ANTISPPQSDSAKERLNVILKERQEKLKSSDSGKAMLSFREKLPAFKMKAEFLKAVAENQ 298
+N P + + +E++++ LK + K +L RE LP K + E + AV +
Sbjct: 348 SNIDEGPLAFATQEQISLELKNEHMYHIQDPNIKQVLIDRESLPVKKFEEEIMHAVHNSP 407
Query: 299 VLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQPXXXXXXXXXXXXXXERGENL 358
V+++ G TGCGKTTQ+PQ+IL+E + + R A CNI+ TQP ERGE +
Sbjct: 408 VVIIRGATGCGKTTQVPQYILDEYIRNDRAAQCNIVVTQPRRISAVSVAERVAFERGEEI 467
Query: 359 GETVGYQIRLESKRSA-QTRLLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFX 417
G++ GY +R ES +LFCT GVLLR+L + + +SH++VDEIHER +N DF
Sbjct: 468 GKSCGYSVRFESVLPRPHASMLFCTVGVLLRKL--ESGIRGISHVIVDEIHERDINTDFL 525
Query: 418 XXXXXXXXXXXXXXXXXXMSATINADLFSKYFGNAPTVHIPGLTFPVTDLFLEDVLEKTR 477
MSATI+ +F +YF N P + + G TFPV + +LED ++ T+
Sbjct: 526 LVVLRDVIQAFPEIRVILMSATIDTSMFCEYFFNCPIIEVFGRTFPVQEYYLEDCIQMTQ 585
Query: 478 YKMNSKLDSFQGNXXXXXXQDSKKDHLTALFEDVDIDSNYKNYRASTRASLEAWSAEQID 537
+ + D + + D + + +D Y TR S+ S ++
Sbjct: 586 F-IPPPRDKKKKDKDEEGGDDEETNCNLVCGDD---------YGPETRRSMSQLSEKETP 635
Query: 538 LGLVESTIEYICRHEGDGAILVFLTGWNDISKLLDQIKVNKFLGDPNKFLVLPLHGSMPT 597
L L+E+ ++YI GA+LVFL GWN I + +++N G + + +LPLH +P
Sbjct: 636 LELIEALLKYIETLNVPGAVLVFLPGWNLIYAMQKHLEMNPHFGS-HSYCILPLHSQIPR 694
Query: 598 INQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSW 657
QR++FD P K++L+TNIAE+SITI+DVVYV+D K K + + N + W
Sbjct: 695 DEQRKVFDPVPDGIIKVILSTNIAETSITINDVVYVIDSCKQKVKLFTSHNNMTNYATVW 754
Query: 658 ISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQLPEILRTPLQELCLHIKSLQLGT 717
SK + QR+GRAGRV+PG C+ L + D + + PEI RTPL E+ L IK L+LG
Sbjct: 755 ASKTNLEQRKGRAGRVRPGFCFHLCSKARFDKLETHLTPEIFRTPLHEVALSIKLLRLGG 814
Query: 718 VGSFLSKALQPPDPL-AVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGKMLLMG 776
+G FLSKA++PP PL AV A L+ + ALD + LTPLGR L LP++P +GKM+++G
Sbjct: 815 IGHFLSKAIEPP-PLDAVIEAEHTLRELDALDSNDELTPLGRILAKLPIEPRLGKMMIIG 873
Query: 777 AIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDA 836
IF + TI+AA PF+ + + + R+FAG+ SDH+ALL F + DA
Sbjct: 874 CIFYVGDALCTISAATCFPEPFI---SEGRRLGYVHRNFAGNRFSDHVALLSVFQAWDDA 930
Query: 837 KRNRRERD--FCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYSHD--L 892
+ + + FC L+ TL+M + + Q D+L + GF ++ +N D L
Sbjct: 931 RMGGEDAETRFCEHKRLNMATLRMTWEAKVQLKDILVNAGFPEECLMNQVFNNTGPDNNL 990
Query: 893 EMVCAILCAGLYPNVVQCKRKGKRAVFYTKEVGQVAL-HPSSVN---ANQN-NFPLPYMV 947
++V ++L G+YPNV C K KR + T+ G+ AL H SSVN +NQ+ +P P+ V
Sbjct: 991 DVVISLLAFGVYPNV--CYHKEKRKILTTE--GRNALIHKSSVNCPFSNQDLKYPSPFFV 1046
Query: 948 YSEMVKTNNINVYDSTNISEYALLLFGGNLIPSKTGEGIEMLGGYLHFSASKTVLELIRK 1007
+SE ++T I+ T +S LLLF + S GE I L ++ S + I
Sbjct: 1047 FSEKIRTRAISAKGMTMVSPLQLLLFASKKVMSD-GEFIH-LDDWIKLSMAHEESACITA 1104
Query: 1008 LRGELDKLLNRKIEDPRV 1025
LR L+ L+ ++P +
Sbjct: 1105 LRAALEALVVEVTKEPEI 1122
>TAIR|locus:2009200 [details] [associations]
symbol:NIH "nuclear DEIH-boxhelicase" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003678
"DNA helicase activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006259 "DNA metabolic process" evidence=ISS]
InterPro:IPR002110 InterPro:IPR001374 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF01424 Pfam:PF04408 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 PROSITE:PS50297
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0008026 IPI:IPI00521146 RefSeq:NP_172152.1 UniGene:At.20810
PRIDE:F4IDQ6 EnsemblPlants:AT1G06670.1 GeneID:837177
KEGG:ath:AT1G06670 OMA:GNMEENT Uniprot:F4IDQ6
Length = 1576
Score = 798 (286.0 bits), Expect = 1.4e-121, Sum P(3) = 1.4e-121
Identities = 177/463 (38%), Positives = 275/463 (59%)
Query: 534 EQIDLGLVESTIEYICRHEGDGAILVFLTGWNDISKLLDQIKVNKFLGDPNKFLVLPLHG 593
E++D+GL+ ++ IC DGAILVFL GW +ISK +++ ++F KF++L LH
Sbjct: 555 EEVDVGLIVKLMKKICSDSKDGAILVFLPGWEEISKTKEKLLDDRFFAHSAKFIILCLHS 614
Query: 594 SMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACL 653
+P Q+++F+RPP RKIVLATNIAES++TIDDVVYV+D G+ KE SYD N ++ L
Sbjct: 615 RVPAEEQKKVFNRPPRGCRKIVLATNIAESAVTIDDVVYVIDSGRMKEKSYDPYNDVSTL 674
Query: 654 LPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLP-YQLPEILRTPLQELCLHIKS 712
SW+SKA+A QR GRAGR Q G+CY LY ++ A LP Y++PE++R P+ ELCL +K
Sbjct: 675 QSSWVSKANAKQRAGRAGRCQAGICYHLYSKL-RAASLPEYRVPEVMRMPVDELCLQVKM 733
Query: 713 LQLG-TVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGK 771
L V FL K + PP +++NA+ +LK IGAL E LT LG+ LPV P I K
Sbjct: 734 LDPNCNVNDFLQKLMDPPVAQSIENALIILKDIGALTPEEELTELGQKFGQLPVHPRISK 793
Query: 772 MLLMGAIFQCLNPALTIAAALAHRNPFVLPVNM--QKEVDEAKRSFA---GDSCSDHIAL 826
M+ + CL+PAL +A A ++PF +P++ +K+ AK A GD SDH+A
Sbjct: 794 MIYFAILVNCLDPALILACAADEKDPFTMPLSPGDRKKAAAAKHELASLYGDH-SDHLAT 852
Query: 827 LKAFDGYKDAKRNRRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYN 886
+ AF +K+AK + + ++FC + F+S + ++ ++D+ + L+ G + S + N
Sbjct: 853 VAAFQCWKNAKASGQAKEFCSKYFISQVVMKRLDDLCRKLQGELNRHGVIPSSSSNCSLN 912
Query: 887 RYSHDLEMVCAILCAGLYPNVVQ-C--KRKGKRAVFYTKEVGQVALHPS---SVNANQNN 940
+HD ++ A++ GLYP + + C + R+V T +V + PS +V+ +
Sbjct: 913 --AHDPGILRAVIAVGLYPMLGRMCPLSKNRTRSVIETIAGAKVRV-PSLSNNVDMSSTK 969
Query: 941 FPLPYMVYSEMVKTN-NINVYDSTNISEYALLLFGGNLIPSKT 982
F +V+ E+ + + + + T + +LLF + S T
Sbjct: 970 FDEALIVFDEITRGDWGVVIRSCTVLPTIPVLLFSREIAVSTT 1012
Score = 428 (155.7 bits), Expect = 1.4e-121, Sum P(3) = 1.4e-121
Identities = 93/253 (36%), Positives = 136/253 (53%)
Query: 264 KLKSSDSGKAMLSFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEEL 323
+LK + + R KLP + + AV NQV++++GETGCGKTTQ+PQ++L+
Sbjct: 200 RLKKERHFREIFEARSKLPIASFRDAIISAVESNQVVLIAGETGCGKTTQVPQYLLDHMW 259
Query: 324 SSLRGADCNIICTQPXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLLFCTT 383
S + A C IICTQP ERGE +G TVGY++RL+S+ ++ ++FCT
Sbjct: 260 HSKKEA-CKIICTQPRRISAISVSDRISWERGETIGRTVGYKVRLQSEGGRESSVVFCTN 318
Query: 384 GVLLRQLVE---DPDLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATI 440
G+LLR L+ + + ++H++VDEIHER DF MSAT+
Sbjct: 319 GILLRVLIGKGVNSSVPDITHIIVDEIHERDSYSDFMLMILRDLLPSNPHLRLILMSATL 378
Query: 441 NADLFSKYFGNAPTVHIPGLTFPVTDLFLEDVLEKTRYKMNSKLDSFQGNXXXXXXQDSK 500
+A+ FS+YFG P V +PG T+PV FL+D L NS L S +D K
Sbjct: 379 DAERFSEYFGGCPVVRVPGFTYPVRTFFLDDALSVLNSDKNSHLLS-------AVKRDFK 431
Query: 501 KDHLTALFEDVDI 513
+ +L E +D+
Sbjct: 432 DEDKVSLDEAIDL 444
Score = 56 (24.8 bits), Expect = 3.1e-35, Sum P(3) = 3.1e-35
Identities = 20/73 (27%), Positives = 31/73 (42%)
Query: 707 CLHIKSLQLGTVG-SFLSKALQPPDPLAVQNAIELLKTIGALD--DMENLTPLGRHLCTL 763
C + ++ LG + +F + PP LA+ N L K LD +ME TP
Sbjct: 1218 CKSLNNVDLGNIEENFGNMEENPPSDLAIGNEQTLPKLASNLDMGNMEENTPSDLANGNE 1277
Query: 764 PVDPNIGKMLLMG 776
+PN + +G
Sbjct: 1278 KTEPNSANSMDLG 1290
Score = 40 (19.1 bits), Expect = 1.4e-33, Sum P(3) = 1.4e-33
Identities = 11/34 (32%), Positives = 19/34 (55%)
Query: 982 TGEGIEMLGGY-LHFSASKTVLELIRKLRGELDK 1014
+G+ E Y + K + +L RKL+GEL++
Sbjct: 865 SGQAKEFCSKYFISQVVMKRLDDLCRKLQGELNR 898
Score = 38 (18.4 bits), Expect = 1.4e-121, Sum P(3) = 1.4e-121
Identities = 19/129 (14%), Positives = 56/129 (43%)
Query: 121 WWGK-LEQMKRGEEQEMIIKRKFSRADQQTLADMAHQLGLHFHAYNKGKALAVSKVPLPM 179
W K LE + + +++ + +++ + M +GL + G+ +S +
Sbjct: 20 WATKVLEDFRASGNDSYVFEQQLTNSERGIIHQMCRTMGLRSKSNGSGEERRLS-----L 74
Query: 180 YRPDLDERHGSTEKELQMSIETERRVGNLLNSSQGNVPVNDSGIESSEVARRPKLSVKVA 239
++ D + S ++ + + + + G+ ++ S ++ + + R+ ++S K
Sbjct: 75 FKGDGISK--SDKRRMYEARNQKEKEGDGISKSYSKHRY-ETRFQKAGGIRKTRISPKKL 131
Query: 240 NTIS-PPQS 247
+S PP++
Sbjct: 132 KCVSFPPEA 140
>UNIPROTKB|G5E5N3 [details] [associations]
symbol:DHX9 "ATP-dependent RNA helicase A" species:9913
"Bos taurus" [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=IEA] [GO:0070934 "CRD-mediated mRNA stabilization"
evidence=IEA] [GO:0034605 "cellular response to heat" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001085
"RNA polymerase II transcription factor binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 GO:GO:0005524 GO:GO:0005813
GO:GO:0034605 GO:GO:0005730 Gene3D:3.30.160.20 GO:GO:0030529
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 UniGene:Bt.5544 GO:GO:0070937
OMA:DDWIRLQ GO:GO:0070934 EMBL:DAAA02043563 EMBL:DAAA02043564
Ensembl:ENSBTAT00000026409 Uniprot:G5E5N3
Length = 1287
Score = 1195 (425.7 bits), Expect = 1.7e-121, P = 1.7e-121
Identities = 288/802 (35%), Positives = 436/802 (54%)
Query: 239 ANTISPPQSDSAKERLNVILK-ERQEKLKSSDSGKAMLSFREKLPAFKMKAEFLKAVAEN 297
+N P + + E++++ LK E +L+ +A+L RE LP K ++E L+A+++N
Sbjct: 342 SNIDEGPLAYATPEQISMDLKNELMYQLEQDRDLQAVLQERELLPVKKFESEILEAISQN 401
Query: 298 QVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQPXXXXXXXXXXXXXXERGEN 357
V+++ G TGCGKTTQ+PQFIL++ + + R A+CNI+ TQP ERGE
Sbjct: 402 PVVIIRGATGCGKTTQVPQFILDDCIQNDRAAECNIVVTQPRRISAVSVAERVAYERGEE 461
Query: 358 LGETVGYQIRLES-KRSAQTRLLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDF 416
G++ GY +R ES ++FCT GVLLR+L + + +SH++VDEIHER +N DF
Sbjct: 462 PGKSCGYSVRFESILPRPHASIMFCTVGVLLRKL--EAGIRGISHVIVDEIHERDINTDF 519
Query: 417 XXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGNAPTVHIPGLTFPVTDLFLEDVLEKT 476
MSATI+ +F +YF N P + + G TFPV + FLED ++ T
Sbjct: 520 LLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCPIIEVYGRTFPVQEYFLEDCIQMT 579
Query: 477 RYKMNSKLDSFQGNXXXXXXQDSKKDHLTALFEDVDIDSNY---KNYRASTRASLEAWSA 533
+ K KKD ED D + N Y A TR S+ +
Sbjct: 580 HFVPPPK-------------DKKKKDKDDDGGEDDDANCNLICGDEYGAETRISMAQLNE 626
Query: 534 EQIDLGLVESTIEYICRHEGDGAILVFLTGWNDISKLLDQIKVNKFLGDPNKFLVLPLHG 593
++ L+E+ + YI GA+LVFL GWN I + +++N G +++ +LPLH
Sbjct: 627 KETPFELIEALLLYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHFGS-HRYQILPLHS 685
Query: 594 SMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACL 653
+P QR++FD P KI+L+TNIAE+SITI+DVVYV+D K K + A N +
Sbjct: 686 QIPREEQRKVFDPVPSGVTKIILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNY 745
Query: 654 LPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQLPEILRTPLQELCLHIKSL 713
W SK + QR+GRAGRV+PG C+ L R + + + PE+ RTPL E+ L IK L
Sbjct: 746 ATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFERLETHMTPEMFRTPLHEIALSIKLL 805
Query: 714 QLGTVGSFLSKALQPPDPL-AVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGKM 772
+LG +G FL+KA++PP PL AV A L+ + ALD + LTPLGR L LP++P GKM
Sbjct: 806 RLGGIGQFLAKAIEPP-PLDAVIEAEHTLRELDALDANDELTPLGRILAKLPIEPRFGKM 864
Query: 773 LLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDG 832
++MG IF + TI+AA PF+ + K + R+FAG+ SDH+ALL F
Sbjct: 865 MIMGCIFYVGDAICTISAATCFPEPFI---SEGKRLGYIHRNFAGNRFSDHVALLSVFQA 921
Query: 833 YKDAKRNRRERD--FCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYSH 890
+ DA+ E + FC L+ TL+M + + Q ++L + GF ++ +
Sbjct: 922 WDDARMGGEEAEIRFCEHKRLNMATLRMTWEAKVQLKEILINSGFPEECLLTQVFTNTGP 981
Query: 891 D--LEMVCAILCAGLYPNVVQCKRKGKRAVFYTKEVGQVAL-HPSSVN---ANQN-NFPL 943
D L++V ++L G+YPNV C K KR + T+ G+ AL H SSVN ++Q+ +P
Sbjct: 982 DNNLDVVISLLAFGVYPNV--CYHKEKRKILTTE--GRNALIHKSSVNCPFSSQDMKYPS 1037
Query: 944 PYMVYSEMVKTNNINVYDSTNISEYALLLFGGNLIPSKTGEGIEMLGGYLHFSASKTVLE 1003
P+ V+ E ++T I+ T ++ LLLF + S G+ + ++ ++ S
Sbjct: 1038 PFFVFGEKIRTRAISAKGMTLVTPLQLLLFASKKVQSD-GQ-LVLVDDWIRLQISHEAAA 1095
Query: 1004 LIRKLRGELDKLLNRKIEDPRV 1025
I LR ++ L+ + P +
Sbjct: 1096 CITALRAAMEALVVEVTKQPGI 1117
>UNIPROTKB|Q28141 [details] [associations]
symbol:DHX9 "ATP-dependent RNA helicase A" species:9913
"Bos taurus" [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=ISS] [GO:0030529 "ribonucleoprotein complex" evidence=ISS]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 GO:GO:0005730 GO:GO:0003677 Gene3D:3.30.160.20
GO:GO:0030529 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000247063 EMBL:X82829 IPI:IPI00714708
PIR:I46032 RefSeq:NP_776461.1 UniGene:Bt.5544
ProteinModelPortal:Q28141 SMR:Q28141 STRING:Q28141 PRIDE:Q28141
GeneID:281115 KEGG:bta:281115 CTD:1660 HOVERGEN:HBG039429
InParanoid:Q28141 KO:K13184 OrthoDB:EOG4HHP1J NextBio:20805185
GO:GO:0070937 Uniprot:Q28141
Length = 1287
Score = 1195 (425.7 bits), Expect = 1.7e-121, P = 1.7e-121
Identities = 288/802 (35%), Positives = 436/802 (54%)
Query: 239 ANTISPPQSDSAKERLNVILK-ERQEKLKSSDSGKAMLSFREKLPAFKMKAEFLKAVAEN 297
+N P + + E++++ LK E +L+ +A+L RE LP K ++E L+A+++N
Sbjct: 342 SNIDEGPLAYATPEQISMDLKNELMYQLEQDRDLQAVLQERELLPVKKFESEILEAISQN 401
Query: 298 QVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQPXXXXXXXXXXXXXXERGEN 357
V+++ G TGCGKTTQ+PQFIL++ + + R A+CNI+ TQP ERGE
Sbjct: 402 PVVIIRGATGCGKTTQVPQFILDDCIQNDRAAECNIVVTQPRRISAVSVAERVAYERGEE 461
Query: 358 LGETVGYQIRLES-KRSAQTRLLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDF 416
G++ GY +R ES ++FCT GVLLR+L + + +SH++VDEIHER +N DF
Sbjct: 462 PGKSCGYSVRFESILPRPHASIMFCTVGVLLRKL--EAGIRGISHVIVDEIHERDINTDF 519
Query: 417 XXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGNAPTVHIPGLTFPVTDLFLEDVLEKT 476
MSATI+ +F +YF N P + + G TFPV + FLED ++ T
Sbjct: 520 LLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCPIIEVYGRTFPVQEYFLEDCIQMT 579
Query: 477 RYKMNSKLDSFQGNXXXXXXQDSKKDHLTALFEDVDIDSNY---KNYRASTRASLEAWSA 533
+ K KKD ED D + N Y A TR S+ +
Sbjct: 580 HFVPPPK-------------DKKKKDKDDDGGEDDDANCNLICGDEYGAETRISMAQLNE 626
Query: 534 EQIDLGLVESTIEYICRHEGDGAILVFLTGWNDISKLLDQIKVNKFLGDPNKFLVLPLHG 593
++ L+E+ + YI GA+LVFL GWN I + +++N G +++ +LPLH
Sbjct: 627 KETPFELIEALLLYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHFGS-HRYQILPLHS 685
Query: 594 SMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACL 653
+P QR++FD P KI+L+TNIAE+SITI+DVVYV+D K K + A N +
Sbjct: 686 QIPREEQRKVFDPVPSGVTKIILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNY 745
Query: 654 LPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQLPEILRTPLQELCLHIKSL 713
W SK + QR+GRAGRV+PG C+ L R + + + PE+ RTPL E+ L IK L
Sbjct: 746 ATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFERLETHMTPEMFRTPLHEIALSIKLL 805
Query: 714 QLGTVGSFLSKALQPPDPL-AVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGKM 772
+LG +G FL+KA++PP PL AV A L+ + ALD + LTPLGR L LP++P GKM
Sbjct: 806 RLGGIGQFLAKAIEPP-PLDAVIEAEHTLRELDALDANDELTPLGRILAKLPIEPRFGKM 864
Query: 773 LLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDG 832
++MG IF + TI+AA PF+ + K + R+FAG+ SDH+ALL F
Sbjct: 865 MIMGCIFYVGDAICTISAATCFPEPFI---SEGKRLGYIHRNFAGNRFSDHVALLSVFQA 921
Query: 833 YKDAKRNRRERD--FCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYSH 890
+ DA+ E + FC L+ TL+M + + Q ++L + GF ++ +
Sbjct: 922 WDDARMGGEEAEIRFCEHKRLNMATLRMTWEAKVQLKEILINSGFPEECLLTQVFTNTGP 981
Query: 891 D--LEMVCAILCAGLYPNVVQCKRKGKRAVFYTKEVGQVAL-HPSSVN---ANQN-NFPL 943
D L++V ++L G+YPNV C K KR + T+ G+ AL H SSVN ++Q+ +P
Sbjct: 982 DNNLDVVISLLAFGVYPNV--CYHKEKRKILTTE--GRNALIHKSSVNCPFSSQDMKYPS 1037
Query: 944 PYMVYSEMVKTNNINVYDSTNISEYALLLFGGNLIPSKTGEGIEMLGGYLHFSASKTVLE 1003
P+ V+ E ++T I+ T ++ LLLF + S G+ + ++ ++ S
Sbjct: 1038 PFFVFGEKIRTRAISAKGMTLVTPLQLLLFASKKVQSD-GQ-LVLVDDWIRLQISHEAAA 1095
Query: 1004 LIRKLRGELDKLLNRKIEDPRV 1025
I LR ++ L+ + P +
Sbjct: 1096 CITALRAAMEALVVEVTKQPGI 1117
>RGD|1308548 [details] [associations]
symbol:Dhx9 "DEAH (Asp-Glu-Ala-His) box polypeptide 9"
species:10116 "Rattus norvegicus" [GO:0001085 "RNA polymerase II
transcription factor binding" evidence=IEA;ISO] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0007623 "circadian rhythm" evidence=IEA;ISO]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA;ISO]
[GO:0034605 "cellular response to heat" evidence=IEA;ISO]
[GO:0070934 "CRD-mediated mRNA stabilization" evidence=IEA;ISO]
[GO:0070937 "CRD-mediated mRNA stability complex" evidence=IEA;ISO]
InterPro:IPR001159 InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137
PROSITE:PS51194 SMART:SM00358 SMART:SM00490 SMART:SM00847
InterPro:IPR014720 RGD:1308548 GO:GO:0005524 Gene3D:3.30.160.20
GO:GO:0005622 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:1660 KO:K13184 OrthoDB:EOG4HHP1J
EMBL:CH473958 IPI:IPI00947663 RefSeq:NP_001100654.1
UniGene:Rn.107359 Ensembl:ENSRNOT00000064860 GeneID:304859
KEGG:rno:304859 UCSC:RGD:1308548 NextBio:653729 Uniprot:D4A9D6
Length = 1174
Score = 1195 (425.7 bits), Expect = 1.7e-121, P = 1.7e-121
Identities = 285/802 (35%), Positives = 438/802 (54%)
Query: 239 ANTISPPQSDSAKERLNVILK-ERQEKLKSSDSGKAMLSFREKLPAFKMKAEFLKAVAEN 297
+N P + ++ E++++ LK E +++ + +++L RE LP K +AE L+A+++N
Sbjct: 348 SNIDEGPLAYASTEQISMDLKNELAYQMEQDHNLQSVLQERELLPVKKFEAEILEAISQN 407
Query: 298 QVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQPXXXXXXXXXXXXXXERGEN 357
V+++ G TGCGKTTQ+PQ+IL++ + + R A+CNI+ TQP ERGE
Sbjct: 408 SVVIIRGATGCGKTTQVPQYILDDFIQNDRAAECNIVVTQPRRISAVAVAERVAYERGEE 467
Query: 358 LGETVGYQIRLES-KRSAQTRLLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDF 416
G++ GY +R ES ++FCT GVLLR+L + + +SH++VDEIHER +N DF
Sbjct: 468 PGKSCGYSVRFESILPRPHASIMFCTVGVLLRKL--EAGIRGISHVIVDEIHERDINTDF 525
Query: 417 XXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGNAPTVHIPGLTFPVTDLFLEDVLEKT 476
MSATI+ +F +YF N P + + G TFPV + FLED ++ T
Sbjct: 526 LLVVLRDVVLAYPEVRIVLMSATIDTTMFCEYFFNCPIIEVYGRTFPVQEYFLEDCIQMT 585
Query: 477 RYKMNSKLDSFQGNXXXXXXQDSKKDHLTALFEDVDIDSNY---KNYRASTRASLEAWSA 533
++ K KKD ED D + N Y T+ S+ +
Sbjct: 586 QFIPPPK-------------DKKKKDKEDDGGEDDDANCNLICGDEYGPETKLSMSQLNE 632
Query: 534 EQIDLGLVESTIEYICRHEGDGAILVFLTGWNDISKLLDQIKVNKFLGDPNKFLVLPLHG 593
++ L+E+ ++YI GA+LVFL GWN I + ++ N G +++ +LPLH
Sbjct: 633 KETPFELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLENNSHFGS-HRYQILPLHS 691
Query: 594 SMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACL 653
+P QR++FD P K++L+TNIAE+SITI+DVVYV+D K K + A N +
Sbjct: 692 QIPREEQRKVFDPVPDGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNY 751
Query: 654 LPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQLPEILRTPLQELCLHIKSL 713
W SK + QR+GRAGRV+PG C+ L R D + + PE+ RTPL E+ L IK L
Sbjct: 752 ATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFDRLETHMTPEMFRTPLHEIALSIKLL 811
Query: 714 QLGTVGSFLSKALQPPDPL-AVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGKM 772
+LG +G FL+KA++PP PL AV A L+ + ALD + LTPLGR L LP++P GKM
Sbjct: 812 RLGGIGQFLAKAIEPP-PLDAVIEAEHTLRELDALDANDELTPLGRILAKLPIEPRFGKM 870
Query: 773 LLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDG 832
++MG IF + TI+AA PF+ + K + R+FAG+ SDH+ALL F
Sbjct: 871 MIMGCIFYVGDAVCTISAATCFPEPFI---SEGKRLGYIHRNFAGNRFSDHVALLSVFQA 927
Query: 833 YKDAKRNRRERD--FCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYSH 890
+ DA+ + E + FC + L+ TL+M + + Q ++L + GF + +
Sbjct: 928 WDDARMSGEEAEIRFCEQKRLNMATLRMTWEAKVQLKEILINSGFPEDCLLTQVFTNTGP 987
Query: 891 D--LEMVCAILCAGLYPNVVQCKRKGKRAVFYTKEVGQVAL-HPSSVN---ANQN-NFPL 943
D L++V ++L G+YPNV C K KR + T+ G+ AL H SSVN ++Q+ +P
Sbjct: 988 DNNLDVVISLLAFGVYPNV--CYHKEKRKILTTE--GRNALIHKSSVNCPFSSQDMKYPS 1043
Query: 944 PYMVYSEMVKTNNINVYDSTNISEYALLLFGGNLIPSKTGEGIEMLGGYLHFSASKTVLE 1003
P+ V+ E ++T I+ T ++ LLLF + S G+ I + ++ S
Sbjct: 1044 PFFVFGEKIRTRAISAKGMTLVTPLQLLLFASKKVQSD-GQ-IVFIDDWIRLQISHEAAA 1101
Query: 1004 LIRKLRGELDKLLNRKIEDPRV 1025
I LR ++ L+ + P +
Sbjct: 1102 CITALRAAMEALVVEVSKQPNI 1123
>UNIPROTKB|E2RNT3 [details] [associations]
symbol:DHX9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=IEA] [GO:0070934 "CRD-mediated mRNA stabilization"
evidence=IEA] [GO:0034605 "cellular response to heat" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001085
"RNA polymerase II transcription factor binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 GO:GO:0005524 GO:GO:0005813
GO:GO:0034605 GO:GO:0005730 Gene3D:3.30.160.20 GO:GO:0030529
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:1660 KO:K13184 GO:GO:0070937
OMA:DDWIRLQ GO:GO:0070934 EMBL:AAEX03005146 EMBL:AAEX03005147
RefSeq:XP_537154.2 Ensembl:ENSCAFT00000020976 GeneID:480032
KEGG:cfa:480032 NextBio:20855120 Uniprot:E2RNT3
Length = 1276
Score = 1188 (423.3 bits), Expect = 9.5e-121, P = 9.5e-121
Identities = 285/802 (35%), Positives = 434/802 (54%)
Query: 239 ANTISPPQSDSAKERLNVILK-ERQEKLKSSDSGKAMLSFREKLPAFKMKAEFLKAVAEN 297
+N P + + E++++ LK E +L+ A+L RE LP K ++E L+A+++N
Sbjct: 346 SNIDEGPLAYATPEQISMDLKNELMYQLEQDHDLPAILQERELLPVKKFESEILEAISQN 405
Query: 298 QVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQPXXXXXXXXXXXXXXERGEN 357
V+++ G TGCGKTTQ+PQFIL++ + + R A+CNI+ TQP ERGE
Sbjct: 406 SVVIIRGATGCGKTTQVPQFILDDFIQNDRAAECNIVVTQPRRISAVSVAERVAYERGEE 465
Query: 358 LGETVGYQIRLESKRSAQ-TRLLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDF 416
G++ GY +R ES ++FCT GVLLR+L + + +SH++VDEIHER +N DF
Sbjct: 466 PGKSCGYSVRFESVLPRPYASIMFCTVGVLLRKL--EAGIRGISHVIVDEIHERDINTDF 523
Query: 417 XXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGNAPTVHIPGLTFPVTDLFLEDVLEKT 476
MSATI+ +F +YF N P + + G T+PV + FLED ++ T
Sbjct: 524 LLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCPIIEVYGRTYPVQEYFLEDCIQMT 583
Query: 477 RYKMNSKLDSFQGNXXXXXXQDSKKDHLTALFEDVDIDSNY---KNYRASTRASLEAWSA 533
+ K KKD ED D + N Y T+ S+ +
Sbjct: 584 HFIPPPK-------------DKKKKDKEDDGGEDDDANCNLICGDEYGPETKMSMAQLNE 630
Query: 534 EQIDLGLVESTIEYICRHEGDGAILVFLTGWNDISKLLDQIKVNKFLGDPNKFLVLPLHG 593
++ L+E+ ++YI GA+LVFL GWN I + +++N G +++ +LPLH
Sbjct: 631 KETPFELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPDFGS-HRYQILPLHS 689
Query: 594 SMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACL 653
+P QR++FD P K++L+TNIAE+SITI+DVVYV+D K K + A N +
Sbjct: 690 QIPREEQRKVFDPVPAGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNY 749
Query: 654 LPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQLPEILRTPLQELCLHIKSL 713
W SK + QR+GRAGRV+PG C+ L R + + + PE+ RTPL E+ L IK L
Sbjct: 750 ATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFERLETHMTPEMFRTPLHEIALSIKLL 809
Query: 714 QLGTVGSFLSKALQPPDPL-AVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGKM 772
+LG +G FL+KA++PP PL AV A L+ + ALD + LTPLGR L LP++P GKM
Sbjct: 810 RLGGIGQFLAKAIEPP-PLDAVIEAEHTLRELDALDANDELTPLGRILAKLPIEPRFGKM 868
Query: 773 LLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDG 832
++MG IF + TI+AA PF+ + K + R+FAG+ SDH+ALL F
Sbjct: 869 MIMGCIFYVGDAVCTISAATCFPEPFI---SEGKRLGYIHRNFAGNRFSDHVALLSVFQA 925
Query: 833 YKDAKRNRRERD--FCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYSH 890
+ DA+ E + FC L+ TL+M + + Q ++L + GF + +
Sbjct: 926 WDDARMGGEEAEIRFCEHKRLNMATLRMTWEAKVQLKEILINSGFPEDCLLTQVFTNTGP 985
Query: 891 D--LEMVCAILCAGLYPNVVQCKRKGKRAVFYTKEVGQVAL-HPSSVN---ANQN-NFPL 943
D L++V ++L G+YPNV C K KR + T+ G+ AL H SSVN ++Q+ +P
Sbjct: 986 DNNLDVVISLLAFGVYPNV--CYHKEKRKILTTE--GRNALIHKSSVNCPFSSQDMKYPS 1041
Query: 944 PYMVYSEMVKTNNINVYDSTNISEYALLLFGGNLIPSKTGEGIEMLGGYLHFSASKTVLE 1003
P+ V+ E ++T I+ T ++ LLLF + S G+ I ++ ++ S
Sbjct: 1042 PFFVFGEKIRTRAISAKGMTLVTPLQLLLFASKKVQSD-GQ-IVLVDDWIRLQISHEAAA 1099
Query: 1004 LIRKLRGELDKLLNRKIEDPRV 1025
I LR ++ L+ + P +
Sbjct: 1100 CITALRAAMEALVVEVTKQPNI 1121
>MGI|MGI:108177 [details] [associations]
symbol:Dhx9 "DEAH (Asp-Glu-Ala-His) box polypeptide 9"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001085 "RNA polymerase II transcription factor
binding" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005813 "centrosome" evidence=ISO]
[GO:0007623 "circadian rhythm" evidence=IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0030529 "ribonucleoprotein
complex" evidence=ISO] [GO:0034605 "cellular response to heat"
evidence=IDA] [GO:0070934 "CRD-mediated mRNA stabilization"
evidence=ISO] [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=ISO] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 MGI:MGI:108177 GO:GO:0005524
GO:GO:0034605 GO:GO:0005730 GO:GO:0003677 GO:GO:0007623
Gene3D:3.30.160.20 GO:GO:0030529 GO:GO:0003725 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247063 CTD:1660
HOVERGEN:HBG039429 KO:K13184 OrthoDB:EOG4HHP1J GO:GO:0070937
EMBL:U91922 EMBL:AF023530 EMBL:AY512925 EMBL:BC089159 EMBL:AK013423
EMBL:U92080 IPI:IPI00339468 IPI:IPI00607914 IPI:IPI00875791
RefSeq:NP_031868.2 UniGene:Mm.20000 PDB:1UIL PDB:1WHQ PDB:2RS6
PDB:2RS7 PDBsum:1UIL PDBsum:1WHQ PDBsum:2RS6 PDBsum:2RS7
ProteinModelPortal:O70133 SMR:O70133 IntAct:O70133 STRING:O70133
PhosphoSite:O70133 PaxDb:O70133 PRIDE:O70133 GeneID:13211
KEGG:mmu:13211 UCSC:uc007czy.1 InParanoid:O70133 ChiTaRS:DHX9
EvolutionaryTrace:O70133 NextBio:283382 CleanEx:MM_DHX9
Genevestigator:O70133 GermOnline:ENSMUSG00000042699 Uniprot:O70133
Length = 1380
Score = 1182 (421.1 bits), Expect = 4.1e-120, P = 4.1e-120
Identities = 283/802 (35%), Positives = 437/802 (54%)
Query: 239 ANTISPPQSDSAKERLNVILK-ERQEKLKSSDSGKAMLSFREKLPAFKMKAEFLKAVAEN 297
+N P + ++ E++++ LK E +++ + +++L RE LP K +AE L+A++ N
Sbjct: 347 SNIDEGPLAYASTEQISMDLKNELTYQMEQDHNLQSVLQERELLPVKKFEAEILEAISSN 406
Query: 298 QVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQPXXXXXXXXXXXXXXERGEN 357
V+++ G TGCGKTTQ+PQ+IL++ + + R A+CNI+ TQP ERGE
Sbjct: 407 SVVIIRGATGCGKTTQVPQYILDDFIQNDRAAECNIVVTQPRRISAVAVAERVAYERGEE 466
Query: 358 LGETVGYQIRLES-KRSAQTRLLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDF 416
G++ GY +R ES ++FCT GVLLR+L + + +SH++VDEIHER +N DF
Sbjct: 467 PGKSCGYSVRFESILPRPHASIMFCTVGVLLRKL--EAGIRGISHVIVDEIHERDINTDF 524
Query: 417 XXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGNAPTVHIPGLTFPVTDLFLEDVLEKT 476
MSATI+ +F +YF N P + + G TFPV + FLED ++ T
Sbjct: 525 LLVVLRDVVLAYPEVRIVLMSATIDTTMFCEYFFNCPIIEVYGRTFPVQEYFLEDCIQMT 584
Query: 477 RYKMNSKLDSFQGNXXXXXXQDSKKDHLTALFEDVDIDSNY---KNYRASTRASLEAWSA 533
++ K KKD ED D + N Y T+ S+ +
Sbjct: 585 QFIPPPK-------------DKKKKDKEDDGGEDDDANCNLICGDEYGPETKLSMSQLNE 631
Query: 534 EQIDLGLVESTIEYICRHEGDGAILVFLTGWNDISKLLDQIKVNKFLGDPNKFLVLPLHG 593
++ L+E+ ++YI GA+LVFL GWN I + ++ N G +++ +LPLH
Sbjct: 632 KETPFELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLENNSHFGS-HRYQILPLHS 690
Query: 594 SMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACL 653
+P QR++FD P K++L+TNIAE+SITI+DVVYV+D K K + A N +
Sbjct: 691 QIPREEQRKVFDPVPDGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNY 750
Query: 654 LPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQLPEILRTPLQELCLHIKSL 713
W SK + QR+GRAGRV+PG C+ L R D + + PE+ RTPL E+ L IK L
Sbjct: 751 ATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFDRLETHMTPEMFRTPLHEIALSIKLL 810
Query: 714 QLGTVGSFLSKALQPPDPL-AVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGKM 772
+LG +G FL+KA++PP PL A+ A L+ + ALD + LTPLGR L LP++P GKM
Sbjct: 811 RLGGIGQFLAKAIEPP-PLDAIIEAEHTLRELDALDANDELTPLGRILAKLPIEPRFGKM 869
Query: 773 LLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDG 832
++MG IF + TI+AA PF+ + K + R+FAG+ SDH+ALL F
Sbjct: 870 MIMGCIFYVGDAVCTISAATCFPEPFI---SEGKRLGYIHRNFAGNRFSDHVALLSVFQA 926
Query: 833 YKDAKRNRRERD--FCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYSH 890
+ DA+ + E + FC + L+ TL+M + + Q ++L + GF + +
Sbjct: 927 WDDARMSGEEAEIRFCEQKRLNMATLRMTWEAKVQLKEILINSGFPEDCLLTQVFTNTGP 986
Query: 891 D--LEMVCAILCAGLYPNVVQCKRKGKRAVFYTKEVGQVAL-HPSSVN---ANQN-NFPL 943
D L++V ++L G+YPNV C K KR + T+ G+ AL H SSVN ++Q+ +P
Sbjct: 987 DNNLDVVISLLAFGVYPNV--CYHKEKRKILTTE--GRNALIHKSSVNCPFSSQDMKYPS 1042
Query: 944 PYMVYSEMVKTNNINVYDSTNISEYALLLFGGNLIPSKTGEGIEMLGGYLHFSASKTVLE 1003
P+ V+ E ++T I+ T ++ LLLF + S G+ I + ++ S
Sbjct: 1043 PFFVFGEKIRTRAISAKGMTLVTPLQLLLFASKKVQSD-GQ-IVFIDDWIRLQISHEAAA 1100
Query: 1004 LIRKLRGELDKLLNRKIEDPRV 1025
I +R ++ L+ + P +
Sbjct: 1101 CIT-IRAAMEALVVEVSKQPNI 1121
>FB|FBgn0002774 [details] [associations]
symbol:mle "maleless" species:7227 "Drosophila melanogaster"
[GO:0005700 "polytene chromosome" evidence=IDA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;TAS] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0000785 "chromatin"
evidence=IDA] [GO:0007549 "dosage compensation"
evidence=NAS;IMP;TAS] [GO:0009047 "dosage compensation by
hyperactivation of X chromosome" evidence=NAS] [GO:0045433 "male
courtship behavior, veined wing generated song production"
evidence=IGI] [GO:0016456 "X chromosome located dosage compensation
complex, transcription activating" evidence=NAS;TAS] [GO:0005694
"chromosome" evidence=NAS] [GO:0005634 "nucleus" evidence=IDA;NAS]
[GO:0003725 "double-stranded RNA binding" evidence=IEA;ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0016457 "dosage
compensation complex assembly involved in dosage compensation by
hyperactivation of X chromosome" evidence=TAS] [GO:0003724 "RNA
helicase activity" evidence=NAS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0048675 "axon extension" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0000805 "X chromosome" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0005665 "DNA-directed RNA polymerase II, core
complex" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001159 InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137
PROSITE:PS51194 SMART:SM00358 SMART:SM00490 SMART:SM00847
InterPro:IPR014720 EMBL:AE013599 GO:GO:0005524 GO:GO:0008340
Gene3D:3.30.160.20 GO:GO:0045944 GO:GO:0000785 GO:GO:0003682
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0045433 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0048675 GO:GO:0003724
GeneTree:ENSGT00550000074257 KO:K13184 OMA:DDWIRLQ GO:GO:0016456
EMBL:M74121 EMBL:BT003785 EMBL:BT010267 PIR:B40025
RefSeq:NP_476641.1 RefSeq:NP_724440.1 UniGene:Dm.2901
ProteinModelPortal:P24785 SMR:P24785 IntAct:P24785 MINT:MINT-768581
STRING:P24785 PaxDb:P24785 PRIDE:P24785 EnsemblMetazoa:FBtr0086031
GeneID:35523 KEGG:dme:Dmel_CG11680 CTD:35523 FlyBase:FBgn0002774
InParanoid:P24785 OrthoDB:EOG47H44V PhylomeDB:P24785
GenomeRNAi:35523 NextBio:793836 Bgee:P24785 GermOnline:CG11680
GO:GO:0016457 Uniprot:P24785
Length = 1293
Score = 1179 (420.1 bits), Expect = 8.5e-120, P = 8.5e-120
Identities = 280/786 (35%), Positives = 421/786 (53%)
Query: 262 QEKLKSSDSGKAMLSFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEE 321
+++ ++ + + L FREKLP M++E L A+ +N V+++ G TGCGKTTQ+ Q+IL++
Sbjct: 365 RDRRQNDNEYRQFLEFREKLPIAAMRSEILTAINDNPVVIIRGNTGCGKTTQIAQYILDD 424
Query: 322 ELSSLRGADCNIICTQPXXXXXXXXXXXXXXERGENLGETVGYQIRLESK-RSAQTRLLF 380
+ S +G NI TQP ER E LG+TVGY +R ES +LF
Sbjct: 425 YICSGQGGYANIYVTQPRRISAISVAERVARERCEQLGDTVGYSVRFESVFPRPYGAILF 484
Query: 381 CTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATI 440
CT GVLLR+L + L VSH++VDEIHER +N DF MSATI
Sbjct: 485 CTVGVLLRKL--EAGLRGVSHIIVDEIHERDVNSDFLLVILRDMVDTYPDLHVILMSATI 542
Query: 441 NADLFSKYFGNAPTVHIPGLTFPVTDLFLEDVLEKTRYKMNSKLDSFQGNXXXXXXQDSK 500
+ FSKYFG P + +PG FPV FLED+++ T + + S + +D +
Sbjct: 543 DTTKFSKYFGICPVLEVPGRAFPVQQFFLEDIIQMTDF-----VPSAESRRKRKEVEDEE 597
Query: 501 KDHLTALFEDVD-IDSNYKN-----YRASTRASLEAWSAEQIDLGLVESTIEYICRHEGD 554
+ L ED D + NY Y TR ++ S + L+E+ + +I
Sbjct: 598 Q----LLSEDKDEAEINYNKVCEDKYSQKTRNAMAMLSESDVSFELLEALLMHIKSKNIP 653
Query: 555 GAILVFLTGWNDISKLLDQIKVNKFLGDPNKFLVLPLHGSMPTINQREIFDRPPPNKRKI 614
GAILVFL GWN I L+ ++ GD +++ +LP H +P QR++F+ P KI
Sbjct: 654 GAILVFLPGWNLIFALMKFLQNTNIFGDTSQYQILPCHSQIPRDEQRKVFEPVPEGVTKI 713
Query: 615 VLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQ 674
+L+TNIAE+SITIDD+V+V+D KA+ + + N L W SK + QR+GRAGRV+
Sbjct: 714 ILSTNIAETSITIDDIVFVIDICKARMKLFTSHNNLTSYATVWASKTNLEQRKGRAGRVR 773
Query: 675 PGVCYKLYPRIIHDAMLPYQLPEILRTPLQELCLHIKSLQLGTVGSFLSKALQPPDPLAV 734
PG C+ L R A+ PE+ RTPL E+ L IK L+LG++ FLSKAL+PP AV
Sbjct: 774 PGFCFTLCSRARFQALEDNLTPEMFRTPLHEMALTIKLLRLGSIHHFLSKALEPPPVDAV 833
Query: 735 QNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGKMLLMGAIFQCLNPALTIAAALAH 794
A LL+ + LD + LTPLGR L LP++P +GKM+++GA+F C + + I A+ +
Sbjct: 834 IEAEVLLREMRCLDANDELTPLGRLLARLPIEPRLGKMMVLGAVFGCAD-LMAIMASYSS 892
Query: 795 RNPFVLPVNM-QKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAKRN--RRERDFC-WENF 850
V +++ Q+ + +++ +G CSDH+A++ A ++ K+ E FC W+
Sbjct: 893 TFSEVFSLDIGQRRLANHQKALSGTKCSDHVAMIVASQMWRREKQRGEHMEARFCDWKG- 951
Query: 851 LSPITLQMMEDMRSQFLDLLSDIGFVDKSK-GPSAYNRYSHD---LEMVCAILCAGLYPN 906
L T+ ++ D + Q LDLL GF ++ R D L++ A+LC GLYPN
Sbjct: 952 LQMSTMNVIWDAKQQLLDLLQQAGFPEECMISHEVDERIDGDDPVLDVSLALLCLGLYPN 1011
Query: 907 VVQCKRKGKRAVFYTKEVGQVALHPSSVNANQN--NFPLPYMVYSEMVKTNNINVYDSTN 964
+ C K KR V T E LH +SVN + FP P+ V+ E ++T ++ +
Sbjct: 1012 I--CVHKEKRKVL-TTESKAALLHKTSVNCSNLAVTFPYPFFVFGEKIRTRAVSCKQLSM 1068
Query: 965 ISEYALLLFGGNLIPSKTGEGIEMLGGYLHFSASKTVLELIRKLRGELDKLLNRKIEDPR 1024
+S ++LFG I I + +L+F + I L+ L+ L+ ++P
Sbjct: 1069 VSPLQVILFGSRKI-DLAANNIVRVDNWLNFDIEPELAAKIGALKPALEDLITVACDNPS 1127
Query: 1025 VDLSVE 1030
L +E
Sbjct: 1128 DILRLE 1133
>RGD|2318361 [details] [associations]
symbol:Dhx29 "DEAH (Asp-Glu-Ala-His) box polypeptide 29"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=ISO] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:2318361
GO:GO:0005739 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OrthoDB:EOG43FGW2 GeneTree:ENSGT00550000074257
IPI:IPI00372028 Ensembl:ENSRNOT00000013854 Uniprot:D3ZHW0
Length = 1366
Score = 1138 (405.7 bits), Expect = 1.5e-119, Sum P(2) = 1.5e-119
Identities = 262/712 (36%), Positives = 409/712 (57%)
Query: 363 GYQIRLESKRSAQTRLLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFXXXXXX 422
GYQIR+ES+ S TRLL+CTTGVLLR+L ED L+ VSH++VDE+HER + DF
Sbjct: 660 GYQIRMESRASESTRLLYCTTGVLLRKLQEDGLLADVSHVIVDEVHERSVQSDFLLVILK 719
Query: 423 XXXXXXXXXXXXXMSATINADLFSKYFGNAPTVHIPGLTFPVTDLFLEDVLEKTRY---K 479
MSAT+++D FS YF + P + I G ++PV LED++E+T + K
Sbjct: 720 EILQKRSDLHLILMSATVDSDKFSTYFTHCPILRISGRSYPVEVFHLEDIVEETGFILEK 779
Query: 480 MNSKLDSF-QGNXXXXXXQDSKKDHLTALFEDVDIDSN--------YKNYRASTRASLEA 530
+ F + SK + E + + S Y+ Y + T+ ++
Sbjct: 780 DSEYCQKFLEEEEEITINVTSKAGGIKKYQECIPVQSGASPELSPFYQKYSSRTQYAVLY 839
Query: 531 WSAEQIDLGLVESTIEYICRHEG----DGAILVFLTGWNDISKLLDQIKVNK-FLGDPNK 585
+ +I+L L+ + Y+ + +GA+L+FL G I +L D + ++ F + +
Sbjct: 840 MNPHKINLDLILELLVYLDKSPQFRNIEGAVLIFLPGLAHIQQLYDLLSNDRRFYSE--R 897
Query: 586 FLVLPLHGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYD 645
+ ++ LH + T +Q F PPP RKIVLATNIAE+ ITI DVV+V+D G+ KE Y
Sbjct: 898 YQLIALHSVLSTQDQAAAFMLPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYH 957
Query: 646 ALNKLACLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQLPEILRTPLQE 705
++++ L+ +++SKASA QR+GRAGRV+ G C++LY R + L Y +PEILR PL+E
Sbjct: 958 ESSQMSSLVETFVSKASALQRQGRAGRVRDGFCFRLYTRERFEGFLEYSVPEILRVPLEE 1017
Query: 706 LCLHIKSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDME-NLTPLGRHLCTLP 764
LCLHI LG+ FLSKAL PP P + NA+ LL+ IGA + E LTPLG+HL LP
Sbjct: 1018 LCLHIMKCDLGSPEDFLSKALDPPQPQVISNAMNLLRKIGACEPSEPKLTPLGQHLAALP 1077
Query: 765 VDPNIGKMLLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHI 824
V+ IGKML+ GAIF CL P T+AA + ++PF+ P+ + E D AK S A SDH+
Sbjct: 1078 VNVKIGKMLIFGAIFGCLEPVATLAAVMTEKSPFITPIGRKDEADLAKSSLAVAD-SDHL 1136
Query: 825 ALLKAFDGYKDAKRN---RRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKS-- 879
+ A+ G+K A++ R E +C NFL+ +L +ED++ + + L+ GF +
Sbjct: 1137 TIYNAYLGWKKAQQEGGFRSEISYCQRNFLNRTSLLTLEDVKQELMKLVRAAGFSSSTSW 1196
Query: 880 ---KGPSAYNRYSHDLEMVCAILCAGLYPNV--VQCKRK----GKRAVFYTKEVGQVALH 930
KGP A + D+ ++ A+L AGLY +V + C + K A G+ +H
Sbjct: 1197 EGKKGPQALS--FQDIALLKAVLAAGLYDSVGKIMCTKSVDVTEKLACMVETAQGKAQVH 1254
Query: 931 PSSVNANQNNFPLPYMVYSEMVKTNNINVYDSTNISEYALLLFGGNLIPSKTGEGIEMLG 990
PSSVN + + +++Y E V+ + + ++T I+ + +LLFGG+ I + E + +
Sbjct: 1255 PSSVNRDLQTYG--WLLYQEKVRYARVYLRETTLITPFPVLLFGGD-IEVQHRERLLSVD 1311
Query: 991 GYLHFSASKTVLELIRKLRGELDKLLNRKIEDPRVDLSVEGKAVVSAVVELL 1042
G+++F A + + ++LR +D +L +K+E+P+ +S+E ++ + EL+
Sbjct: 1312 GWIYFQAPVKIAVIFKQLRVLIDSVLRKKLENPK--MSLENDKILQIITELI 1361
Score = 420 (152.9 bits), Expect = 5.8e-36, Sum P(2) = 5.8e-36
Identities = 91/221 (41%), Positives = 132/221 (59%)
Query: 264 KLKSSDSGKAMLSFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEEL 323
+L+S+ + +L R++LP FK +A ++ + ++V+VV+GETG GK+TQ+P F+LE+ L
Sbjct: 555 RLQSTPKYQRLLKERQQLPVFKHRASIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLL 614
Query: 324 SSLRGA-DCNIICTQPXXXXXXXXXXXXXXERGENLG-----ETVGYQIRLESKRSAQTR 377
+ GA CNI+CTQP E G G GYQIR+ES+ S TR
Sbjct: 615 LNDCGARKCNIVCTQPRRISAVSLATRVCEELGCEGGPGGRNSLCGYQIRMESRASESTR 674
Query: 378 LLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMS 437
LL+CTTGVLLR+L ED L+ VSH++VDE+HER + DF MS
Sbjct: 675 LLYCTTGVLLRKLQEDGLLADVSHVIVDEVHERSVQSDFLLVILKEILQKRSDLHLILMS 734
Query: 438 ATINADLFSKYFGNAPTVHIPGLTFPVTDLFLEDVLEKTRY 478
AT+++D FS YF + P + I G ++PV LED++E+T +
Sbjct: 735 ATVDSDKFSTYFTHCPILRISGRSYPVEVFHLEDIVEETGF 775
Score = 59 (25.8 bits), Expect = 1.5e-119, Sum P(2) = 1.5e-119
Identities = 20/64 (31%), Positives = 35/64 (54%)
Query: 209 LNSSQGNVPVNDSG-IESSEVARRPKL-SVKVANTISPP-QSDSAKERLNVILKERQEKL 265
LN S +P S E + RPK SV++ T+SPP Q+ + ++ + +K ++E+
Sbjct: 162 LNLSDDALPEGFSQEFEEQQPKSRPKFQSVQIQATLSPPLQTKTKRQEEDPKIKPKKEE- 220
Query: 266 KSSD 269
KS +
Sbjct: 221 KSME 224
>ZFIN|ZDB-GENE-070912-171 [details] [associations]
symbol:dhx9 "DEAH (Asp-Glu-Ala-His) box polypeptide
9" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 ZFIN:ZDB-GENE-070912-171
GO:GO:0005524 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247063
GeneTree:ENSGT00550000074257 HOVERGEN:HBG039429 OrthoDB:EOG4HHP1J
OMA:DDWIRLQ EMBL:BX571812 IPI:IPI00491874 UniGene:Dr.79297
SMR:B0S6Z1 Ensembl:ENSDART00000111661 Ensembl:ENSDART00000134918
Uniprot:B0S6Z1
Length = 1271
Score = 1174 (418.3 bits), Expect = 2.9e-119, P = 2.9e-119
Identities = 280/800 (35%), Positives = 431/800 (53%)
Query: 239 ANTISPPQSDSAKERL-NVILKERQEKLKSSDSGKAMLSFREKLPAFKMKAEFLKAVAEN 297
+N P + E++ N +L E +L+ + + +L+ R +LP + + + + N
Sbjct: 352 SNIDEGPLAFCTPEQISNDLLNELNYQLEQDQNLQTILTERSQLPVKNFQEQIMSTIYNN 411
Query: 298 QVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQPXXXXXXXXXXXXXXERGEN 357
V+++ G TGCGKTTQ+PQ+IL+E + R +DCNI+ TQP ERGE+
Sbjct: 412 PVVIIRGATGCGKTTQVPQYILDEFIKGGRASDCNIVVTQPRRISAVSVAERVSFERGED 471
Query: 358 LGETVGYQIRLES-KRSAQTRLLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDF 416
+G++ GY +R ES +LFCT GVLLR+L + + +SH++VDEIHER +N DF
Sbjct: 472 VGKSCGYSVRFESFLPRPHASILFCTVGVLLRKL--ESGIRGISHVIVDEIHERDINTDF 529
Query: 417 XXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGNAPTVHIPGLTFPVTDLFLEDVLEKT 476
MSATI+ +F +YF N P + + G PV + FLED ++ T
Sbjct: 530 LLVVLRDVVQAYPDVRVILMSATIDTTMFKEYFFNCPVIEVHGRAHPVQEYFLEDCIQMT 589
Query: 477 RYKMNSKLDSFQGNXXXXXXQDSKKDHLTALFEDVDIDSNY---KNYRASTRASLEAWSA 533
++ + +D + K D D D++ N Y T+ ++ +
Sbjct: 590 QF-VPPPMDR---------KRKDKDDE----GGDEDVNCNVICGSEYSPETKRAMSQLNE 635
Query: 534 EQIDLGLVESTIEYICRHEGDGAILVFLTGWNDISKLLDQIKVNKFLGDPNKFLVLPLHG 593
++ L+E+ ++YI E GA+LVFL GWN I + +++N G +++ +LPLH
Sbjct: 636 KETSFELIEALLKYIETLEVPGAVLVFLPGWNLIYFMQKHLEMNPHFGG-HQYRILPLHS 694
Query: 594 SMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACL 653
+P QR +F+ P K++L+TNIAE+SITI+DVV+V+D K K + + N +
Sbjct: 695 QIPREEQRRVFEPVPDGVTKVILSTNIAETSITINDVVFVLDSCKQKVKLFTSHNNMTNY 754
Query: 654 LPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQLPEILRTPLQELCLHIKSL 713
W SK + QR+GRAGRV+PG C+ L R + + + PEI RTPL E+ L IK L
Sbjct: 755 ATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFEKLETHMTPEIFRTPLHEVALSIKLL 814
Query: 714 QLGTVGSFLSKALQPPDPL-AVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGKM 772
+LG +G+FLSKA++PP PL AV A L+ + ALD + LTPLGR L LP++P +GKM
Sbjct: 815 RLGGIGNFLSKAIEPP-PLDAVIEAEHTLRELDALDSNDELTPLGRILAKLPIEPRLGKM 873
Query: 773 LLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDG 832
++MG IF + TI+AA PF+ N K + R+FAG SDH+ALL F
Sbjct: 874 MIMGCIFNVGDAVCTISAATCFPEPFI---NEGKRLGFVHRNFAGSRFSDHVALLSVFQA 930
Query: 833 YKDAKRNRRERD--FCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYSH 890
+ + + + + FC L+ TL+M + + Q ++L ++GF ++ +N
Sbjct: 931 WDEVRVGGEDAEIRFCEHKRLNMPTLRMTWEAKVQLKEILVNVGFPEECLLNQVFNNVGP 990
Query: 891 D--LEMVCAILCAGLYPNVVQCKRKGKRAVFYTKEVGQVAL-HPSSVNANQNN----FPL 943
D L++V ++L G YPNV C K KR + T+ G+ AL H SSVN +N +P
Sbjct: 991 DNNLDLVISLLTFGSYPNV--CYHKEKRKILTTE--GRNALIHKSSVNCPFSNHDLKYPS 1046
Query: 944 PYMVYSEMVKTNNINVYDSTNISEYALLLFGGNLIPSKTGEGIEMLGGYLHFSASKTVLE 1003
P+ V+ E ++T I+ T +S L+LFG I S GE +E L ++ V
Sbjct: 1047 PFFVFGEKIRTRAISAKSMTLVSPLQLILFGSKKITSN-GEVVE-LDDWIKLQIPHDVAA 1104
Query: 1004 LIRKLRGELDKLLNRKIEDP 1023
+ LR L+ L+ +DP
Sbjct: 1105 GVAGLRAGLEALVVEVTKDP 1124
>UNIPROTKB|F1P1F4 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9031 "Gallus gallus" [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0042645
"mitochondrial nucleoid" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0042645
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 IPI:IPI00593383 OMA:LHKEERY EMBL:AADN02000053
Ensembl:ENSGALT00000008045 Uniprot:F1P1F4
Length = 1231
Score = 791 (283.5 bits), Expect = 3.9e-119, Sum P(2) = 3.9e-119
Identities = 184/455 (40%), Positives = 269/455 (59%)
Query: 536 IDLGLVESTIEYICRHEGDGAILVFLTGWNDISKLLDQIKVNKFLGDPN-KFLVLPLHGS 594
+DL L+ + I H G IL FL GW +I + Q ++ + LG N ++LVLP+H +
Sbjct: 693 LDLDLITDLVLQIDAHGEPGGILCFLPGWQEIKGV--QQRLLEMLGSQNSRYLVLPVHSN 750
Query: 595 MPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLL 654
+P ++Q+ IF RPPP RKIVLATNIAE+SITI+D+V+VVD G KE YD K++CL
Sbjct: 751 IPMMDQQNIFQRPPPGVRKIVLATNIAETSITINDIVHVVDSGTHKEERYDLKTKVSCLE 810
Query: 655 PSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQLPEILRTPLQELCLHIK-SL 713
W+SK++ QRRGRAGR Q G Y L+PR D M YQ+PEILRTPL+ L + K +
Sbjct: 811 TVWVSKSNVVQRRGRAGRCQSGFAYHLFPRSRLDKMPTYQVPEILRTPLENLVVQAKIHM 870
Query: 714 QLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGKML 773
T FLSKAL PD AV A+ LL+ IG LD E LT LG+ L + DP + K +
Sbjct: 871 PEKTAVEFLSKALDSPDIKAVDEAVILLQEIGVLDQREALTTLGKRLAQISTDPRLAKAI 930
Query: 774 LMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGY 833
++ +I++CL+P L I + L R+PF + + EVD+AK + +S SDH+A ++A G+
Sbjct: 931 VLASIYRCLHPLLVIVSCLT-RDPFSSSLQNRAEVDKAKAVLSRESGSDHLAFVRAVAGW 989
Query: 834 KDAKRNR--RERD-FCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKG---PSAY-N 886
++ R R R RD + + +L +L+ + + QF + L + V PS+ N
Sbjct: 990 EEVLRRRDSRARDNYLQDYYLYGPSLRFINGLVKQFSENLYEAFLVSSPSDCTMPSSVCN 1049
Query: 887 RYSHDLEMVCAILCAGLYPNVVQCK-----RKGK---RAVFYTKEVGQVALHPSSVNANQ 938
+YS + E+V +L AGLYPN++Q + R+GK + Y + G V LH S++N
Sbjct: 1050 QYSEEEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSYAYRTKAGTVLLHKSTINREA 1109
Query: 939 NNFPLPYMVYSEMVKTNN-INVYDSTNISEYALLL 972
+ ++ Y VK+N + V DS+ + A+LL
Sbjct: 1110 SKLYSRWLTYFMAVKSNGGVFVRDSSQVHPLAVLL 1144
Score = 415 (151.1 bits), Expect = 3.9e-119, Sum P(2) = 3.9e-119
Identities = 84/196 (42%), Positives = 115/196 (58%)
Query: 281 LPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQPXX 340
LP K L A+ +N V+V++G+TGCGKTT++PQ +LE + RGA CN++ TQP
Sbjct: 478 LPVDPHKDTILSAIEQNPVVVIAGDTGCGKTTRIPQLLLEHYILEGRGARCNVVITQPRR 537
Query: 341 XXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQT-RLLFCTTGVLLRQLVEDPDLSCV 399
E G N+ + VGYQ+RLESK A+ LLFCT G+LLR+L +P L V
Sbjct: 538 ISAISVAQRVAQELGPNMRKNVGYQVRLESKPPARGGALLFCTVGILLRKLQGNPSLEGV 597
Query: 400 SHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGNAPTVHIPG 459
SH++VDE+HER +N DF MSAT + FS YFG+ P V +PG
Sbjct: 598 SHVVVDEVHERDVNTDFLLILLKGIQKLNPDLRLVLMSATGDNQRFSHYFGDCPVVKVPG 657
Query: 460 LTFPVTDLFLEDVLEK 475
+PV + +LE++L K
Sbjct: 658 FMYPVKEYYLEEILAK 673
Score = 37 (18.1 bits), Expect = 3.0e-79, Sum P(2) = 3.0e-79
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 26 ITRPRVLSTSSVSFPLKTAKPPVMSYRPNYQ 56
IT+PR +S SV+ + P M YQ
Sbjct: 532 ITQPRRISAISVAQRVAQELGPNMRKNVGYQ 562
>UNIPROTKB|Q5ZI74 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9031 "Gallus gallus" [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=ISS] [GO:0042645
"mitochondrial nucleoid" evidence=ISS] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003682
GO:GO:0042645 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OrthoDB:EOG4VHK5M EMBL:AJ720910 IPI:IPI00593383
RefSeq:NP_001012869.1 UniGene:Gga.2762 ProteinModelPortal:Q5ZI74
SMR:Q5ZI74 GeneID:420376 KEGG:gga:420376 InParanoid:Q5ZI74
NextBio:20823291 Uniprot:Q5ZI74
Length = 1231
Score = 791 (283.5 bits), Expect = 4.9e-119, Sum P(2) = 4.9e-119
Identities = 184/455 (40%), Positives = 269/455 (59%)
Query: 536 IDLGLVESTIEYICRHEGDGAILVFLTGWNDISKLLDQIKVNKFLGDPN-KFLVLPLHGS 594
+DL L+ + I H G IL FL GW +I + Q ++ + LG N ++LVLP+H +
Sbjct: 693 LDLDLITDLVLQIDAHGEPGGILCFLPGWQEIKGV--QQRLLEMLGSQNSRYLVLPVHSN 750
Query: 595 MPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLL 654
+P ++Q+ IF RPPP RKIVLATNIAE+SITI+D+V+VVD G KE YD K++CL
Sbjct: 751 IPMMDQQNIFQRPPPGVRKIVLATNIAETSITINDIVHVVDSGTHKEERYDLKTKVSCLE 810
Query: 655 PSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQLPEILRTPLQELCLHIK-SL 713
W+SK++ QRRGRAGR Q G Y L+PR D M YQ+PEILRTPL+ L + K +
Sbjct: 811 TVWVSKSNVVQRRGRAGRCQSGFAYHLFPRSRLDKMPTYQVPEILRTPLENLVVQAKIHM 870
Query: 714 QLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGKML 773
T FLSKAL PD AV A+ LL+ IG LD E LT LG+ L + DP + K +
Sbjct: 871 PEKTAVEFLSKALDSPDIKAVDEAVILLQEIGVLDQREALTTLGKRLAQISTDPRLAKAI 930
Query: 774 LMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGY 833
++ +I++CL+P L I + L R+PF + + EVD+AK + +S SDH+A ++A G+
Sbjct: 931 VLASIYRCLHPLLVIVSCLT-RDPFSSSLQNRAEVDKAKAVLSRESGSDHLAFVRAVAGW 989
Query: 834 KDAKRNR--RERD-FCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKG---PSAY-N 886
++ R R R RD + + +L +L+ + + QF + L + V PS+ N
Sbjct: 990 EEVLRRRDSRARDNYLQDYYLYGPSLRFINGLVKQFSENLYEAFLVSSPSDCTMPSSVCN 1049
Query: 887 RYSHDLEMVCAILCAGLYPNVVQCK-----RKGK---RAVFYTKEVGQVALHPSSVNANQ 938
+YS + E+V +L AGLYPN++Q + R+GK + Y + G V LH S++N
Sbjct: 1050 QYSEEEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSYAYRTKAGTVLLHKSTINREA 1109
Query: 939 NNFPLPYMVYSEMVKTNN-INVYDSTNISEYALLL 972
+ ++ Y VK+N + V DS+ + A+LL
Sbjct: 1110 SKLYSRWLTYFMAVKSNGGVFVRDSSQVHPLAVLL 1144
Score = 414 (150.8 bits), Expect = 4.9e-119, Sum P(2) = 4.9e-119
Identities = 84/196 (42%), Positives = 114/196 (58%)
Query: 281 LPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQPXX 340
LP K L A+ +N V+V++G+TGCGKTT++PQ +LE + RGA CN++ TQP
Sbjct: 478 LPVDPHKDTILSAIEQNPVVVIAGDTGCGKTTRIPQLLLEHYILEGRGARCNVVITQPRR 537
Query: 341 XXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQT-RLLFCTTGVLLRQLVEDPDLSCV 399
E G N+ + VGYQ+RLESK A+ LLFCT G+LLR+L +P L V
Sbjct: 538 ISAISVAQRVAQELGPNMRKNVGYQVRLESKPPARGGALLFCTVGILLRKLQGNPSLEGV 597
Query: 400 SHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGNAPTVHIPG 459
SH++VDE+HER +N DF MSAT + FS YFG P V +PG
Sbjct: 598 SHVVVDEVHERDVNTDFLLILLKGIQKLNPDLRLVLMSATGDNQRFSHYFGGCPVVKVPG 657
Query: 460 LTFPVTDLFLEDVLEK 475
+PV + +LE++L K
Sbjct: 658 FMYPVKEYYLEEILAK 673
Score = 37 (18.1 bits), Expect = 3.0e-79, Sum P(2) = 3.0e-79
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 26 ITRPRVLSTSSVSFPLKTAKPPVMSYRPNYQ 56
IT+PR +S SV+ + P M YQ
Sbjct: 532 ITQPRRISAISVAQRVAQELGPNMRKNVGYQ 562
>MGI|MGI:2145374 [details] [associations]
symbol:Dhx29 "DEAH (Asp-Glu-Ala-His) box polypeptide 29"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0006412 "translation"
evidence=IEA] [GO:0006413 "translational initiation" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 MGI:MGI:2145374
GO:GO:0005739 GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 CTD:54505 HOGENOM:HOG000247063
HOVERGEN:HBG081436 OMA:WLLYQEK OrthoDB:EOG43FGW2 EMBL:BC057112
EMBL:BC082319 EMBL:AK028342 EMBL:AK042066 EMBL:AK042497
EMBL:AK049530 IPI:IPI00410936 RefSeq:NP_766182.2 UniGene:Mm.35094
ProteinModelPortal:Q6PGC1 SMR:Q6PGC1 STRING:Q6PGC1
PhosphoSite:Q6PGC1 PaxDb:Q6PGC1 PRIDE:Q6PGC1
Ensembl:ENSMUST00000038574 GeneID:218629 KEGG:mmu:218629
UCSC:uc007rwx.1 GeneTree:ENSGT00550000074257 InParanoid:Q6PGC1
NextBio:376359 Bgee:Q6PGC1 CleanEx:MM_DHX29 Genevestigator:Q6PGC1
GermOnline:ENSMUSG00000042426 Uniprot:Q6PGC1
Length = 1365
Score = 1127 (401.8 bits), Expect = 1.4e-118, Sum P(2) = 1.4e-118
Identities = 261/712 (36%), Positives = 406/712 (57%)
Query: 363 GYQIRLESKRSAQTRLLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFXXXXXX 422
GYQIR+ES+ S TRLL+CTTGVLLR+L ED L+ VSH++VDE+HER + DF
Sbjct: 659 GYQIRMESRASESTRLLYCTTGVLLRKLQEDGLLADVSHVIVDEVHERSVQSDFLLVILK 718
Query: 423 XXXXXXXXXXXXXMSATINADLFSKYFGNAPTVHIPGLTFPVTDLFLEDVLEKTRY---K 479
MSAT+++D FS YF + P + I G ++PV LED++E+T + K
Sbjct: 719 EILQKRSDLHLILMSATVDSDKFSTYFTHCPILRISGRSYPVEVFHLEDIVEETGFVLEK 778
Query: 480 MNSKLDSF-QGNXXXXXXQDSKKDHLTALFEDVDIDSN--------YKNYRASTRASLEA 530
+ F + SK + E + + S Y+ Y + T+ ++
Sbjct: 779 DSEYCQKFLEEEEEITINVTSKAGGVKKYQEYIPVQSGASPELNPFYQKYSSRTQHAILY 838
Query: 531 WSAEQIDLGLVESTIEYICRHEG----DGAILVFLTGWNDISKLLDQIKVNK-FLGDPNK 585
+ +I+L L+ + Y+ + +GA+L+FL G I +L D + ++ F + +
Sbjct: 839 MNPHKINLDLILELLVYLDKSPQFRNIEGAVLIFLPGLAHIQQLYDLLSSDRRFYSE--R 896
Query: 586 FLVLPLHGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYD 645
+ V+ LH + T +Q F PPP RKIVLATNIAE+ ITI DVV+V+D G+ KE Y
Sbjct: 897 YQVIALHSVLSTQDQAAAFMFPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYH 956
Query: 646 ALNKLACLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQLPEILRTPLQE 705
++++ L+ +++SKASA QR+GRAGRV+ G C++LY R + L Y +PEILR PL+E
Sbjct: 957 ESSQMSSLVETFVSKASALQRQGRAGRVRDGFCFRLYTRERFEGFLDYSVPEILRVPLEE 1016
Query: 706 LCLHIKSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDME-NLTPLGRHLCTLP 764
LCLHI LG+ FLSKAL PP + NA+ LL+ IGA + E LTPLG+HL LP
Sbjct: 1017 LCLHIMKCDLGSPEDFLSKALDPPQLQVISNAMNLLRKIGACEPNEPKLTPLGQHLAALP 1076
Query: 765 VDPNIGKMLLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHI 824
V+ IGKML+ GAIF CL P T+AA + ++PF+ P+ + E D AK S A SDH+
Sbjct: 1077 VNVKIGKMLIFGAIFGCLEPVATLAAVMTEKSPFITPIGRKDEADLAKSSLAVAD-SDHL 1135
Query: 825 ALLKAFDGYKDAKRN---RRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKS-- 879
+ A+ G+K A++ R E +C NFL+ +L +ED++ + + L+ GF
Sbjct: 1136 TIYNAYLGWKKAQQEGGFRSEISYCQRNFLNRTSLLTLEDVKQELMKLVKAAGFSSSPSW 1195
Query: 880 ---KGPSAYNRYSHDLEMVCAILCAGLYPNV--VQCKRK----GKRAVFYTKEVGQVALH 930
KGP + D+ ++ A+L AGLY +V + C + K A G+ +H
Sbjct: 1196 EGRKGPQTLS--FQDIALLKAVLAAGLYDSVGKIMCTKSVDVTEKLACMVETAQGKAQVH 1253
Query: 931 PSSVNANQNNFPLPYMVYSEMVKTNNINVYDSTNISEYALLLFGGNLIPSKTGEGIEMLG 990
PSSVN + + +++Y E V+ + + ++T I+ + +LLFGG+ I + E + +
Sbjct: 1254 PSSVNRDLQTYG--WLLYQEKVRYTRVYLRETTLITPFPVLLFGGD-IEVQHRERLLSVD 1310
Query: 991 GYLHFSASKTVLELIRKLRGELDKLLNRKIEDPRVDLSVEGKAVVSAVVELL 1042
G+++F A + + ++LR +D +L +K+E+P+ +S+E ++ + EL+
Sbjct: 1311 GWIYFQAPVKIAVIFKQLRVLIDSVLRKKLENPK--MSLENDKILQIITELI 1360
Score = 419 (152.6 bits), Expect = 6.6e-35, Sum P(2) = 6.6e-35
Identities = 120/377 (31%), Positives = 187/377 (49%)
Query: 121 WWGKLEQMKRGEEQEMIIKRKFSRADQQTLADMAHQLGLHFHAYNKGKALAVSKVPLPMY 180
+W ++ R E+ +++ D A LG Y K +V ++ P Y
Sbjct: 405 YWKCRVRVVRSEDDVLVVCPTILTEDGM----QAQHLGATLALYRLVKGQSVHQLLPPTY 460
Query: 181 RPDLDERHGSTEKELQMS-IETERR----VGNLLNS-------SQGNVPVNDSG-IESSE 227
R E +K +++ +ET + + LLN Q P ++ G E E
Sbjct: 461 RDVWLEWSDEEKKREELNKMETNKPRDLFIAKLLNKLKQQQQQQQQQRPESEKGGSEDPE 520
Query: 228 VARRPKLSVKVANTISPPQSDSAKERLNVILKERQEKLKSSDSGKAMLSFREKLPAFKMK 287
+ +S + +S + SA++ V + +L+S+ + +L R++LP FK +
Sbjct: 521 ESWENLVSDEDLAALSL-EPTSAEDLAPV--RSLFRRLQSTPKYQRLLKERQQLPVFKHR 577
Query: 288 AEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGA-DCNIICTQPXXXXXXXX 346
++ + ++V+VV+GETG GK+TQ+P F+LE+ L GA CNI+CTQP
Sbjct: 578 DSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLDECGARKCNIVCTQPRRISAVSL 637
Query: 347 XXXXXXERGENLG-----ETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVEDPDLSCVSH 401
E G G GYQIR+ES+ S TRLL+CTTGVLLR+L ED L+ VSH
Sbjct: 638 ATRVCEELGCESGPGGRNSLCGYQIRMESRASESTRLLYCTTGVLLRKLQEDGLLADVSH 697
Query: 402 LLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGNAPTVHIPGLT 461
++VDE+HER + DF MSAT+++D FS YF + P + I G +
Sbjct: 698 VIVDEVHERSVQSDFLLVILKEILQKRSDLHLILMSATVDSDKFSTYFTHCPILRISGRS 757
Query: 462 FPVTDLFLEDVLEKTRY 478
+PV LED++E+T +
Sbjct: 758 YPVEVFHLEDIVEETGF 774
Score = 61 (26.5 bits), Expect = 1.4e-118, Sum P(2) = 1.4e-118
Identities = 26/94 (27%), Positives = 44/94 (46%)
Query: 209 LNSSQGNVPVNDSG-IESSEVARRPKL-SVKVANTISPPQSDSAK-ERLNVILKERQEKL 265
LN S +P S E + RPK SV++ T+SPPQ K + + +K ++E+
Sbjct: 162 LNLSDDALPEGFSQEFEEQQPKSRPKFQSVQIQATLSPPQQTKTKRQEEDPKIKPKKEET 221
Query: 266 KSSDSGKA-MLSFREKLPAFKMKAEFLKAVAENQ 298
+ K +L + E+ + K E K + E +
Sbjct: 222 TVEVNMKEWILRYAEQQDE-EEKGEGSKGLEEEE 254
Score = 50 (22.7 bits), Expect = 2.0e-117, Sum P(2) = 2.0e-117
Identities = 12/29 (41%), Positives = 19/29 (65%)
Query: 124 KLEQMKRGEEQEMIIKRKFSRADQQTLAD 152
KLE+ K+G+++ RKF R + +TL D
Sbjct: 280 KLEKNKQGQKEAQEKIRKFQR-EMETLED 307
>RGD|1308888 [details] [associations]
symbol:Dhx30 "DEAH (Asp-Glu-Ala-His) box polypeptide 30"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA;ISO;ISS] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=ISO] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0042645
"mitochondrial nucleoid" evidence=IEA;ISO;ISS] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1308888 GO:GO:0005524 GO:GO:0003682 GO:GO:0003723 GO:GO:0042645
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:22907
HOGENOM:HOG000112212 HOVERGEN:HBG081437 KO:K13185 OrthoDB:EOG4VHK5M
EMBL:BC091359 IPI:IPI00949701 RefSeq:NP_001013267.1
UniGene:Rn.163034 ProteinModelPortal:Q5BJS0 SMR:Q5BJS0
PhosphoSite:Q5BJS0 PRIDE:Q5BJS0 Ensembl:ENSRNOT00000064600
GeneID:367172 KEGG:rno:367172 UCSC:RGD:1308888 NextBio:690809
ArrayExpress:Q5BJS0 Genevestigator:Q5BJS0
GermOnline:ENSRNOG00000029194 Uniprot:Q5BJS0
Length = 1194
Score = 778 (278.9 bits), Expect = 7.0e-118, Sum P(2) = 7.0e-118
Identities = 180/455 (39%), Positives = 270/455 (59%)
Query: 536 IDLGLVESTIEYICRHEGDGAILVFLTGWNDISKLLDQIKVNKFLG-DPNKFLVLPLHGS 594
+DL LV + +I G IL FL GW +I + Q ++ + LG +K+L+LP+H +
Sbjct: 650 LDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGV--QQRLQEALGMHESKYLILPVHSN 707
Query: 595 MPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLL 654
+P ++Q+ IF +PP RKIVLATNIAE+SIT++D+V+VVD G KE YD K++CL
Sbjct: 708 IPMMDQKAIFQQPPLGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLE 767
Query: 655 PSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQLPEILRTPLQELCLHIK-SL 713
W+S+A+ QRRGRAGR Q G Y L+PR + M+P+Q+PEILRTPL+ L L K +
Sbjct: 768 TVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKIHM 827
Query: 714 QLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGKML 773
T FLSKA+ P+ AV A+ LL+ IG LD E LT LG+ L + DP + K +
Sbjct: 828 PEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAI 887
Query: 774 LMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGY 833
++ AIF+CL+P L + + L R+PF + + EVD+ K + DS SDH+A ++A G+
Sbjct: 888 VLAAIFRCLHPLLVVVSCLT-RDPFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAGW 946
Query: 834 KDAKR--NRRERD-FCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKG---PSAY-N 886
++ R +R R+ + EN L +L+ + + QF + + + V K PSA N
Sbjct: 947 EEVLRWQDRTSRENYLEENLLYAPSLRFIHGLIKQFSENIYEAFLVGKPSDCTLPSAQCN 1006
Query: 887 RYSHDLEMVCAILCAGLYPNVVQCK-----RKGK---RAVFYTKEVGQVALHPSSVNANQ 938
YS + E+V +L AGLYPN++Q + R+GK +V Y + G + LH S++N
Sbjct: 1007 EYSEEEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSVTYRTKSGNILLHKSTINREA 1066
Query: 939 NNFPLPYMVYSEMVKTN-NINVYDSTNISEYALLL 972
++ Y VK+N ++ V DS+ + A+LL
Sbjct: 1067 TRLRSRWLTYFMAVKSNGSVFVRDSSQVHPLAVLL 1101
Score = 415 (151.1 bits), Expect = 7.0e-118, Sum P(2) = 7.0e-118
Identities = 83/197 (42%), Positives = 117/197 (59%)
Query: 280 KLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQPX 339
+LP + L A+ ++ V+V+SG+TGCGKTT++PQ +LE ++ RGA CN+I TQP
Sbjct: 433 QLPVDPHRDTILSAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTEGRGARCNVIITQPR 492
Query: 340 XXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQT-RLLFCTTGVLLRQLVEDPDLSC 398
E G +L VG+Q+RLESK A+ LLFCT G+LLR+L +P L
Sbjct: 493 RISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSNPSLEG 552
Query: 399 VSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGNAPTVHIP 458
VSH++VDE+HER +N DF MSAT + + FS+YFG P + +P
Sbjct: 553 VSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVP 612
Query: 459 GLTFPVTDLFLEDVLEK 475
G +PV + +LED+L K
Sbjct: 613 GFMYPVKEHYLEDILAK 629
Score = 164 (62.8 bits), Expect = 1.2e-46, Sum P(2) = 1.2e-46
Identities = 60/213 (28%), Positives = 101/213 (47%)
Query: 850 FLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAY-NRYSHDLEMVCAILCAGLYPNVV 908
F+ + Q E++ FL +G PSA N YS + E+V +L AGLYPN++
Sbjct: 974 FIHGLIKQFSENIYEAFL-----VGKPSDCTLPSAQCNEYSEEEELVKGVLMAGLYPNLI 1028
Query: 909 QCK-----RKGK---RAVFYTKEVGQVALHPSSVNANQNNFPLPYMVYSEMVKTN-NINV 959
Q + R+GK +V Y + G + LH S++N ++ Y VK+N ++ V
Sbjct: 1029 QVRQGKVTRQGKFKPNSVTYRTKSGNILLHKSTINREATRLRSRWLTYFMAVKSNGSVFV 1088
Query: 960 YDSTNISEYA-LLLFGGNLIPSKTGEGIEML---GGYLHFSASKTVLELIRKLRGELDKL 1015
DS+ + A LLL G++ G + L + L+R+LR L ++
Sbjct: 1089 RDSSQVHPLAVLLLTDGDVHIRDDGRRATISLSDSDLLRLEGDSRTVRLLRELRRALGRM 1148
Query: 1016 LNRKI--EDPRVDLSVEGK--AVVSAVVELLHG 1044
+ R + E + LSV+ + +++ + ELL G
Sbjct: 1149 VERSLRSELAALPLSVQQEHGQLLALLAELLRG 1181
Score = 43 (20.2 bits), Expect = 6.3e-07, Sum P(2) = 6.3e-07
Identities = 21/79 (26%), Positives = 38/79 (48%)
Query: 713 LQLGTVGSFLSKAL--QPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIG 770
L LG LS + +P PL+ + L +++ L+ P+ + LPVDP+
Sbjct: 384 LPLGKDSGPLSDPITGKPYMPLSEAEEVRLSQSL--LELWRRRGPIWQEAPQLPVDPH-- 439
Query: 771 KMLLMGAIFQCLNPALTIA 789
+ ++ AI Q +P + I+
Sbjct: 440 RDTILSAIEQ--HPVVVIS 456
>UNIPROTKB|Q5BJS0 [details] [associations]
symbol:Dhx30 "Putative ATP-dependent RNA helicase DHX30"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 RGD:1308888 GO:GO:0005524 GO:GO:0003682
GO:GO:0003723 GO:GO:0042645 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OrthoDB:EOG4VHK5M EMBL:BC091359 IPI:IPI00949701
RefSeq:NP_001013267.1 UniGene:Rn.163034 ProteinModelPortal:Q5BJS0
SMR:Q5BJS0 PhosphoSite:Q5BJS0 PRIDE:Q5BJS0
Ensembl:ENSRNOT00000064600 GeneID:367172 KEGG:rno:367172
UCSC:RGD:1308888 NextBio:690809 ArrayExpress:Q5BJS0
Genevestigator:Q5BJS0 GermOnline:ENSRNOG00000029194 Uniprot:Q5BJS0
Length = 1194
Score = 778 (278.9 bits), Expect = 7.0e-118, Sum P(2) = 7.0e-118
Identities = 180/455 (39%), Positives = 270/455 (59%)
Query: 536 IDLGLVESTIEYICRHEGDGAILVFLTGWNDISKLLDQIKVNKFLG-DPNKFLVLPLHGS 594
+DL LV + +I G IL FL GW +I + Q ++ + LG +K+L+LP+H +
Sbjct: 650 LDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGV--QQRLQEALGMHESKYLILPVHSN 707
Query: 595 MPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLL 654
+P ++Q+ IF +PP RKIVLATNIAE+SIT++D+V+VVD G KE YD K++CL
Sbjct: 708 IPMMDQKAIFQQPPLGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLE 767
Query: 655 PSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQLPEILRTPLQELCLHIK-SL 713
W+S+A+ QRRGRAGR Q G Y L+PR + M+P+Q+PEILRTPL+ L L K +
Sbjct: 768 TVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKIHM 827
Query: 714 QLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGKML 773
T FLSKA+ P+ AV A+ LL+ IG LD E LT LG+ L + DP + K +
Sbjct: 828 PEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAI 887
Query: 774 LMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGY 833
++ AIF+CL+P L + + L R+PF + + EVD+ K + DS SDH+A ++A G+
Sbjct: 888 VLAAIFRCLHPLLVVVSCLT-RDPFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAGW 946
Query: 834 KDAKR--NRRERD-FCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKG---PSAY-N 886
++ R +R R+ + EN L +L+ + + QF + + + V K PSA N
Sbjct: 947 EEVLRWQDRTSRENYLEENLLYAPSLRFIHGLIKQFSENIYEAFLVGKPSDCTLPSAQCN 1006
Query: 887 RYSHDLEMVCAILCAGLYPNVVQCK-----RKGK---RAVFYTKEVGQVALHPSSVNANQ 938
YS + E+V +L AGLYPN++Q + R+GK +V Y + G + LH S++N
Sbjct: 1007 EYSEEEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSVTYRTKSGNILLHKSTINREA 1066
Query: 939 NNFPLPYMVYSEMVKTN-NINVYDSTNISEYALLL 972
++ Y VK+N ++ V DS+ + A+LL
Sbjct: 1067 TRLRSRWLTYFMAVKSNGSVFVRDSSQVHPLAVLL 1101
Score = 415 (151.1 bits), Expect = 7.0e-118, Sum P(2) = 7.0e-118
Identities = 83/197 (42%), Positives = 117/197 (59%)
Query: 280 KLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQPX 339
+LP + L A+ ++ V+V+SG+TGCGKTT++PQ +LE ++ RGA CN+I TQP
Sbjct: 433 QLPVDPHRDTILSAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTEGRGARCNVIITQPR 492
Query: 340 XXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQT-RLLFCTTGVLLRQLVEDPDLSC 398
E G +L VG+Q+RLESK A+ LLFCT G+LLR+L +P L
Sbjct: 493 RISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSNPSLEG 552
Query: 399 VSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGNAPTVHIP 458
VSH++VDE+HER +N DF MSAT + + FS+YFG P + +P
Sbjct: 553 VSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVP 612
Query: 459 GLTFPVTDLFLEDVLEK 475
G +PV + +LED+L K
Sbjct: 613 GFMYPVKEHYLEDILAK 629
Score = 164 (62.8 bits), Expect = 1.2e-46, Sum P(2) = 1.2e-46
Identities = 60/213 (28%), Positives = 101/213 (47%)
Query: 850 FLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAY-NRYSHDLEMVCAILCAGLYPNVV 908
F+ + Q E++ FL +G PSA N YS + E+V +L AGLYPN++
Sbjct: 974 FIHGLIKQFSENIYEAFL-----VGKPSDCTLPSAQCNEYSEEEELVKGVLMAGLYPNLI 1028
Query: 909 QCK-----RKGK---RAVFYTKEVGQVALHPSSVNANQNNFPLPYMVYSEMVKTN-NINV 959
Q + R+GK +V Y + G + LH S++N ++ Y VK+N ++ V
Sbjct: 1029 QVRQGKVTRQGKFKPNSVTYRTKSGNILLHKSTINREATRLRSRWLTYFMAVKSNGSVFV 1088
Query: 960 YDSTNISEYA-LLLFGGNLIPSKTGEGIEML---GGYLHFSASKTVLELIRKLRGELDKL 1015
DS+ + A LLL G++ G + L + L+R+LR L ++
Sbjct: 1089 RDSSQVHPLAVLLLTDGDVHIRDDGRRATISLSDSDLLRLEGDSRTVRLLRELRRALGRM 1148
Query: 1016 LNRKI--EDPRVDLSVEGK--AVVSAVVELLHG 1044
+ R + E + LSV+ + +++ + ELL G
Sbjct: 1149 VERSLRSELAALPLSVQQEHGQLLALLAELLRG 1181
Score = 43 (20.2 bits), Expect = 6.3e-07, Sum P(2) = 6.3e-07
Identities = 21/79 (26%), Positives = 38/79 (48%)
Query: 713 LQLGTVGSFLSKAL--QPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIG 770
L LG LS + +P PL+ + L +++ L+ P+ + LPVDP+
Sbjct: 384 LPLGKDSGPLSDPITGKPYMPLSEAEEVRLSQSL--LELWRRRGPIWQEAPQLPVDPH-- 439
Query: 771 KMLLMGAIFQCLNPALTIA 789
+ ++ AI Q +P + I+
Sbjct: 440 RDTILSAIEQ--HPVVVIS 456
>UNIPROTKB|J9P3P6 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AAEX03012236 Ensembl:ENSCAFT00000047198
Uniprot:J9P3P6
Length = 1135
Score = 771 (276.5 bits), Expect = 7.7e-118, Sum P(2) = 7.7e-118
Identities = 179/455 (39%), Positives = 269/455 (59%)
Query: 536 IDLGLVESTIEYICRHEGDGAILVFLTGWNDISKLLDQIKVNKFLG-DPNKFLVLPLHGS 594
+DL LV + +I G IL FL GW +I + Q ++ + LG +K+L+LP+H +
Sbjct: 650 LDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGV--QQRLQEALGMHESKYLILPVHSN 707
Query: 595 MPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLL 654
+P ++Q+ IF +PP RKIVLATNIAE+SIT++D+V+VVD G KE YD K++CL
Sbjct: 708 IPMMDQKAIFQQPPVGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLE 767
Query: 655 PSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQLPEILRTPLQELCLHIK-SL 713
W+S+A+ QRRGRAGR Q G Y L+PR + M+P+Q+PEILRTPL+ L L K +
Sbjct: 768 TVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKIHM 827
Query: 714 QLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGKML 773
T FLSKA+ P+ AV A+ LL+ IG LD E LT LG+ L + DP + K +
Sbjct: 828 PEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAI 887
Query: 774 LMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGY 833
++ AIF+CL+P L + + L R+PF + + EVD+ K + DS SDH+A ++A G+
Sbjct: 888 VLAAIFRCLHPLLVVVSCLT-RDPFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAGW 946
Query: 834 KDAKR--NRRERD-FCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKG---PSAY-N 886
++ R +R R+ + EN L +L+ + + QF + + + V K SA N
Sbjct: 947 EEVLRWQDRSSRENYLEENLLYAPSLRFIHGLIKQFSENIYEAFLVGKPSDCTLASAQCN 1006
Query: 887 RYSHDLEMVCAILCAGLYPNVVQCK-----RKGK---RAVFYTKEVGQVALHPSSVNANQ 938
YS + E+V +L AGLYPN++Q + R+GK +V Y + G + LH S++N
Sbjct: 1007 EYSEEEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSVTYRTKSGNILLHKSTINREA 1066
Query: 939 NNFPLPYMVYSEMVKTN-NINVYDSTNISEYALLL 972
++ Y VK+N ++ V DS+ + A+LL
Sbjct: 1067 TRLRSRWLTYFMAVKSNGSVFVRDSSQVHPLAVLL 1101
Score = 418 (152.2 bits), Expect = 7.7e-118, Sum P(2) = 7.7e-118
Identities = 84/197 (42%), Positives = 117/197 (59%)
Query: 280 KLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQPX 339
+LP + L A+ ++ V+V+SG+TGCGKTT++PQ +LE +S RGA CN+I TQP
Sbjct: 433 QLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYVSEGRGARCNVIITQPR 492
Query: 340 XXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQT-RLLFCTTGVLLRQLVEDPDLSC 398
E G +L VG+Q+RLESK A+ LLFCT G+LLR+L +P L
Sbjct: 493 RISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSNPSLEG 552
Query: 399 VSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGNAPTVHIP 458
VSH++VDE+HER +N DF MSAT + + FS+YFG P + +P
Sbjct: 553 VSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVP 612
Query: 459 GLTFPVTDLFLEDVLEK 475
G +PV + +LED+L K
Sbjct: 613 GFMYPVKEHYLEDILAK 629
>MGI|MGI:1920081 [details] [associations]
symbol:Dhx30 "DEAH (Asp-Glu-Ala-His) box polypeptide 30"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=ISO] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0042645 "mitochondrial
nucleoid" evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 MGI:MGI:1920081 GO:GO:0005524
GO:GO:0003682 GO:GO:0003723 GO:GO:0042645 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OMA:LHKEERY EMBL:AB047557 EMBL:AK146326 EMBL:AK148778
EMBL:AK153969 EMBL:BC004082 EMBL:BC016202 IPI:IPI00127902
IPI:IPI00270064 IPI:IPI00761204 RefSeq:NP_001239611.1
RefSeq:NP_001239612.1 RefSeq:NP_579925.1 UniGene:Mm.276305
ProteinModelPortal:Q99PU8 SMR:Q99PU8 PhosphoSite:Q99PU8
PaxDb:Q99PU8 PRIDE:Q99PU8 Ensembl:ENSMUST00000035056
Ensembl:ENSMUST00000062368 Ensembl:ENSMUST00000111991
Ensembl:ENSMUST00000136969 Ensembl:ENSMUST00000142911
Ensembl:ENSMUST00000148287 Ensembl:ENSMUST00000165596 GeneID:72831
KEGG:mmu:72831 UCSC:uc009rtg.1 UCSC:uc009rth.1 UCSC:uc009rti.1
ChiTaRS:DHX30 NextBio:337009 Bgee:Q99PU8 CleanEx:MM_DHX30
Genevestigator:Q99PU8 GermOnline:ENSMUSG00000032480 Uniprot:Q99PU8
Length = 1217
Score = 778 (278.9 bits), Expect = 9.6e-118, Sum P(2) = 9.6e-118
Identities = 180/455 (39%), Positives = 270/455 (59%)
Query: 536 IDLGLVESTIEYICRHEGDGAILVFLTGWNDISKLLDQIKVNKFLG-DPNKFLVLPLHGS 594
+DL LV + +I G IL FL GW +I + Q ++ + LG +K+L+LP+H +
Sbjct: 673 LDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGV--QQRLQEALGMHESKYLILPVHSN 730
Query: 595 MPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLL 654
+P ++Q+ IF +PP RKIVLATNIAE+SIT++D+V+VVD G KE YD K++CL
Sbjct: 731 IPMMDQKAIFQQPPLGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLE 790
Query: 655 PSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQLPEILRTPLQELCLHIK-SL 713
W+S+A+ QRRGRAGR Q G Y L+PR + M+P+Q+PEILRTPL+ L L K +
Sbjct: 791 TVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKIHM 850
Query: 714 QLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGKML 773
T FLSKA+ P+ AV A+ LL+ IG LD E LT LG+ L + DP + K +
Sbjct: 851 PEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAI 910
Query: 774 LMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGY 833
++ AIF+CL+P L + + L R+PF + + EVD+ K + DS SDH+A ++A G+
Sbjct: 911 VLAAIFRCLHPLLVVVSCLT-RDPFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAGW 969
Query: 834 KDAKR--NRRERD-FCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKG---PSAY-N 886
++ R +R R+ + EN L +L+ + + QF + + + V K PSA N
Sbjct: 970 EEVLRWQDRTSRENYLEENLLYAPSLRFIHGLIKQFSENIYEAFLVGKPSDCTLPSAQCN 1029
Query: 887 RYSHDLEMVCAILCAGLYPNVVQCK-----RKGK---RAVFYTKEVGQVALHPSSVNANQ 938
YS + E+V +L AGLYPN++Q + R+GK +V Y + G + LH S++N
Sbjct: 1030 EYSEEEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSVTYRTKSGNILLHKSTINREA 1089
Query: 939 NNFPLPYMVYSEMVKTN-NINVYDSTNISEYALLL 972
++ Y VK+N ++ V DS+ + A+LL
Sbjct: 1090 TRLRSRWLTYFMAVKSNGSVFVRDSSQVHPLAVLL 1124
Score = 415 (151.1 bits), Expect = 9.6e-118, Sum P(2) = 9.6e-118
Identities = 83/197 (42%), Positives = 117/197 (59%)
Query: 280 KLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQPX 339
+LP + L A+ ++ V+V+SG+TGCGKTT++PQ +LE ++ RGA CN+I TQP
Sbjct: 456 QLPVDPHRDTILSAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTEGRGARCNVIITQPR 515
Query: 340 XXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQT-RLLFCTTGVLLRQLVEDPDLSC 398
E G +L VG+Q+RLESK A+ LLFCT G+LLR+L +P L
Sbjct: 516 RISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSNPSLEG 575
Query: 399 VSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGNAPTVHIP 458
VSH++VDE+HER +N DF MSAT + + FS+YFG P + +P
Sbjct: 576 VSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVP 635
Query: 459 GLTFPVTDLFLEDVLEK 475
G +PV + +LED+L K
Sbjct: 636 GFMYPVKEHYLEDILAK 652
>UNIPROTKB|D4A1V3 [details] [associations]
symbol:Dhx30 "Putative ATP-dependent RNA helicase DHX30"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1308888 GO:GO:0005524 GO:GO:0003682 GO:GO:0003676 GO:GO:0042645
EMBL:CH473954 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 OMA:LHKEERY
UniGene:Rn.163034 IPI:IPI00203041 Ensembl:ENSRNOT00000045878
Uniprot:D4A1V3
Length = 1222
Score = 778 (278.9 bits), Expect = 1.0e-117, Sum P(2) = 1.0e-117
Identities = 180/455 (39%), Positives = 270/455 (59%)
Query: 536 IDLGLVESTIEYICRHEGDGAILVFLTGWNDISKLLDQIKVNKFLG-DPNKFLVLPLHGS 594
+DL LV + +I G IL FL GW +I + Q ++ + LG +K+L+LP+H +
Sbjct: 678 LDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGV--QQRLQEALGMHESKYLILPVHSN 735
Query: 595 MPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLL 654
+P ++Q+ IF +PP RKIVLATNIAE+SIT++D+V+VVD G KE YD K++CL
Sbjct: 736 IPMMDQKAIFQQPPLGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLE 795
Query: 655 PSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQLPEILRTPLQELCLHIK-SL 713
W+S+A+ QRRGRAGR Q G Y L+PR + M+P+Q+PEILRTPL+ L L K +
Sbjct: 796 TVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKIHM 855
Query: 714 QLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGKML 773
T FLSKA+ P+ AV A+ LL+ IG LD E LT LG+ L + DP + K +
Sbjct: 856 PEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAI 915
Query: 774 LMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGY 833
++ AIF+CL+P L + + L R+PF + + EVD+ K + DS SDH+A ++A G+
Sbjct: 916 VLAAIFRCLHPLLVVVSCLT-RDPFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAGW 974
Query: 834 KDAKR--NRRERD-FCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKG---PSAY-N 886
++ R +R R+ + EN L +L+ + + QF + + + V K PSA N
Sbjct: 975 EEVLRWQDRTSRENYLEENLLYAPSLRFIHGLIKQFSENIYEAFLVGKPSDCTLPSAQCN 1034
Query: 887 RYSHDLEMVCAILCAGLYPNVVQCK-----RKGK---RAVFYTKEVGQVALHPSSVNANQ 938
YS + E+V +L AGLYPN++Q + R+GK +V Y + G + LH S++N
Sbjct: 1035 EYSEEEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSVTYRTKSGNILLHKSTINREA 1094
Query: 939 NNFPLPYMVYSEMVKTN-NINVYDSTNISEYALLL 972
++ Y VK+N ++ V DS+ + A+LL
Sbjct: 1095 TRLRSRWLTYFMAVKSNGSVFVRDSSQVHPLAVLL 1129
Score = 415 (151.1 bits), Expect = 1.0e-117, Sum P(2) = 1.0e-117
Identities = 83/197 (42%), Positives = 117/197 (59%)
Query: 280 KLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQPX 339
+LP + L A+ ++ V+V+SG+TGCGKTT++PQ +LE ++ RGA CN+I TQP
Sbjct: 461 QLPVDPHRDTILSAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTEGRGARCNVIITQPR 520
Query: 340 XXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQT-RLLFCTTGVLLRQLVEDPDLSC 398
E G +L VG+Q+RLESK A+ LLFCT G+LLR+L +P L
Sbjct: 521 RISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSNPSLEG 580
Query: 399 VSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGNAPTVHIP 458
VSH++VDE+HER +N DF MSAT + + FS+YFG P + +P
Sbjct: 581 VSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVP 640
Query: 459 GLTFPVTDLFLEDVLEK 475
G +PV + +LED+L K
Sbjct: 641 GFMYPVKEHYLEDILAK 657
Score = 164 (62.8 bits), Expect = 1.3e-46, Sum P(2) = 1.3e-46
Identities = 60/213 (28%), Positives = 101/213 (47%)
Query: 850 FLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAY-NRYSHDLEMVCAILCAGLYPNVV 908
F+ + Q E++ FL +G PSA N YS + E+V +L AGLYPN++
Sbjct: 1002 FIHGLIKQFSENIYEAFL-----VGKPSDCTLPSAQCNEYSEEEELVKGVLMAGLYPNLI 1056
Query: 909 QCK-----RKGK---RAVFYTKEVGQVALHPSSVNANQNNFPLPYMVYSEMVKTN-NINV 959
Q + R+GK +V Y + G + LH S++N ++ Y VK+N ++ V
Sbjct: 1057 QVRQGKVTRQGKFKPNSVTYRTKSGNILLHKSTINREATRLRSRWLTYFMAVKSNGSVFV 1116
Query: 960 YDSTNISEYA-LLLFGGNLIPSKTGEGIEML---GGYLHFSASKTVLELIRKLRGELDKL 1015
DS+ + A LLL G++ G + L + L+R+LR L ++
Sbjct: 1117 RDSSQVHPLAVLLLTDGDVHIRDDGRRATISLSDSDLLRLEGDSRTVRLLRELRRALGRM 1176
Query: 1016 LNRKI--EDPRVDLSVEGK--AVVSAVVELLHG 1044
+ R + E + LSV+ + +++ + ELL G
Sbjct: 1177 VERSLRSELAALPLSVQQEHGQLLALLAELLRG 1209
Score = 43 (20.2 bits), Expect = 6.7e-07, Sum P(2) = 6.7e-07
Identities = 21/79 (26%), Positives = 38/79 (48%)
Query: 713 LQLGTVGSFLSKAL--QPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIG 770
L LG LS + +P PL+ + L +++ L+ P+ + LPVDP+
Sbjct: 412 LPLGKDSGPLSDPITGKPYMPLSEAEEVRLSQSL--LELWRRRGPIWQEAPQLPVDPH-- 467
Query: 771 KMLLMGAIFQCLNPALTIA 789
+ ++ AI Q +P + I+
Sbjct: 468 RDTILSAIEQ--HPVVVIS 484
Score = 38 (18.4 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 714 QLGTVGSFLSKALQPPDPLA 733
+L + + +S L+PPDP A
Sbjct: 6 RLMALAAGVSPRLRPPDPRA 25
>UNIPROTKB|F1N0J0 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9913 "Bos taurus" [GO:0042645 "mitochondrial nucleoid"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0003676
GO:GO:0042645 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 IPI:IPI00717186 UniGene:Bt.24588 OMA:LHKEERY
EMBL:DAAA02054438 Ensembl:ENSBTAT00000030623 Uniprot:F1N0J0
Length = 1220
Score = 771 (276.5 bits), Expect = 2.3e-117, Sum P(2) = 2.3e-117
Identities = 180/455 (39%), Positives = 268/455 (58%)
Query: 536 IDLGLVESTIEYICRHEGDGAILVFLTGWNDISKLLDQIKVNKFLG-DPNKFLVLPLHGS 594
+DL LV + +I G IL FL GW +I + Q ++ + LG +K+L+LP+H +
Sbjct: 676 LDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGV--QQRLQEALGMHESKYLILPVHSN 733
Query: 595 MPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLL 654
+P ++Q+ IF +PP RKIVLATNIAE+SITI+D+V+VVD G KE YD K++CL
Sbjct: 734 IPMMDQKAIFQQPPIGVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLE 793
Query: 655 PSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQLPEILRTPLQELCLHIK-SL 713
W+S+A+ QRRGRAGR Q G Y L+PR + M P+Q+PEILRTPL+ L L K +
Sbjct: 794 TVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMAPFQVPEILRTPLENLVLQAKIHM 853
Query: 714 QLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGKML 773
T FLSKA+ P+ AV A+ LL+ IG LD E LT LG+ L + DP + K +
Sbjct: 854 PEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAI 913
Query: 774 LMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGY 833
++ AIF+CL+P L + + L R+PF + + EVD+ K + DS SDH+A ++A G+
Sbjct: 914 VLAAIFRCLHPLLVVVSCLT-RDPFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVSGW 972
Query: 834 KDAKR--NRRERD-FCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKG---PSAY-N 886
++ R +R R+ + EN L +L+ + + QF + + + V K SA N
Sbjct: 973 EEVLRWQDRSSRENYLEENLLYAPSLRFIHGLIKQFSENIYEAFLVGKPSDCTLASAQCN 1032
Query: 887 RYSHDLEMVCAILCAGLYPNVVQCK-----RKGK---RAVFYTKEVGQVALHPSSVNANQ 938
YS + E+V +L AGLYPN++Q + R+GK +V Y + G + LH S++N
Sbjct: 1033 EYSEEEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSVTYRTKSGNILLHKSTINREA 1092
Query: 939 NNFPLPYMVYSEMVKTN-NINVYDSTNISEYALLL 972
++ Y VK+N ++ V DS+ + A+LL
Sbjct: 1093 TRLRSRWLTYFMAVKSNGSVFVRDSSQVHPLAVLL 1127
Score = 419 (152.6 bits), Expect = 2.3e-117, Sum P(2) = 2.3e-117
Identities = 104/295 (35%), Positives = 156/295 (52%)
Query: 189 GSTEKELQMSIETERRVGNLLNSSQGNVPVNDSGIESSEVARRPKLSVKVANTISPPQSD 248
G T++ +I+ + + + + PV S I SSE+ + + + + S P SD
Sbjct: 365 GETQRR-PCTIQVPEPILRKIETFLNHYPVESSWI-SSELRLQGEDILPLGKD-SGPLSD 421
Query: 249 SAKERLNVILKERQEKLKSSDSGKAMLSFR-------EKLPAFKMKAEFLKAVAENQVLV 301
+ V L E +E L+ S S + R +LP + L A+ ++ V+V
Sbjct: 422 PITGKPYVPLSEAEE-LRLSQSLLELWRRRGPVWQEAPQLPVDPHRDTILNAIEQHPVVV 480
Query: 302 VSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQPXXXXXXXXXXXXXXERGENLGET 361
++G+TGCGKTT++PQ +LE ++ RGA CN+I TQP E G +L
Sbjct: 481 IAGDTGCGKTTRIPQLLLERYVTEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRRN 540
Query: 362 VGYQIRLESKRSAQT-RLLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFXXXX 420
VG+Q+RLESK A+ LLFCT G+LLR+L +P L VSH++VDE+HER +N DF
Sbjct: 541 VGFQVRLESKPPARGGALLFCTVGILLRKLQSNPSLEGVSHVVVDEVHERDVNTDFLLIL 600
Query: 421 XXXXXXXXXXXXXXXMSATINADLFSKYFGNAPTVHIPGLTFPVTDLFLEDVLEK 475
MSAT + + FS+YFG P + +PG +PV + +LED+L K
Sbjct: 601 LKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDILAK 655
Score = 150 (57.9 bits), Expect = 1.4e-45, Sum P(2) = 1.4e-45
Identities = 49/176 (27%), Positives = 82/176 (46%)
Query: 886 NRYSHDLEMVCAILCAGLYPNVVQCK-----RKGK---RAVFYTKEVGQVALHPSSVNAN 937
N YS + E+V +L AGLYPN++Q + R+GK +V Y + G + LH S++N
Sbjct: 1032 NEYSEEEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSVTYRTKSGNILLHKSTINRE 1091
Query: 938 QNNFPLPYMVYSEMVKTN-NINVYDSTNISEYA-LLLFGGNLIPSKTGEGIEML---GGY 992
++ Y VK+N ++ V DS+ + A LLL G++ G +
Sbjct: 1092 ATRLRSRWLTYFMAVKSNGSVFVRDSSQVHPLAVLLLTDGDVHIRDDGRRATISLSDSDL 1151
Query: 993 LHFSASKTVLELIRKLRGELDKLLNRKIEDPRVDL----SVEGKAVVSAVVELLHG 1044
L + L+R+LR L +++ R + L E +++ + ELL G
Sbjct: 1152 LRLEGDSRTVRLLRELRRALGRMVERSLRSELAALPPCVQEEHGQLLALLAELLRG 1207
Score = 44 (20.5 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 21/77 (27%), Positives = 34/77 (44%)
Query: 713 LQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGKM 772
L LG LS + + + A EL + L+ P+ + LPVDP+ +
Sbjct: 410 LPLGKDSGPLSDPITGKPYVPLSEAEELRLSQSLLELWRRRGPVWQEAPQLPVDPH--RD 467
Query: 773 LLMGAIFQCLNPALTIA 789
++ AI Q +P + IA
Sbjct: 468 TILNAIEQ--HPVVVIA 482
>UNIPROTKB|J9P264 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AAEX03012236 Ensembl:ENSCAFT00000047330
Uniprot:J9P264
Length = 1219
Score = 771 (276.5 bits), Expect = 2.9e-117, Sum P(2) = 2.9e-117
Identities = 179/455 (39%), Positives = 269/455 (59%)
Query: 536 IDLGLVESTIEYICRHEGDGAILVFLTGWNDISKLLDQIKVNKFLG-DPNKFLVLPLHGS 594
+DL LV + +I G IL FL GW +I + Q ++ + LG +K+L+LP+H +
Sbjct: 681 LDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGV--QQRLQEALGMHESKYLILPVHSN 738
Query: 595 MPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLL 654
+P ++Q+ IF +PP RKIVLATNIAE+SIT++D+V+VVD G KE YD K++CL
Sbjct: 739 IPMMDQKAIFQQPPVGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLE 798
Query: 655 PSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQLPEILRTPLQELCLHIK-SL 713
W+S+A+ QRRGRAGR Q G Y L+PR + M+P+Q+PEILRTPL+ L L K +
Sbjct: 799 TVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKIHM 858
Query: 714 QLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGKML 773
T FLSKA+ P+ AV A+ LL+ IG LD E LT LG+ L + DP + K +
Sbjct: 859 PEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAI 918
Query: 774 LMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGY 833
++ AIF+CL+P L + + L R+PF + + EVD+ K + DS SDH+A ++A G+
Sbjct: 919 VLAAIFRCLHPLLVVVSCLT-RDPFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAGW 977
Query: 834 KDAKR--NRRERD-FCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKG---PSAY-N 886
++ R +R R+ + EN L +L+ + + QF + + + V K SA N
Sbjct: 978 EEVLRWQDRSSRENYLEENLLYAPSLRFIHGLIKQFSENIYEAFLVGKPSDCTLASAQCN 1037
Query: 887 RYSHDLEMVCAILCAGLYPNVVQCK-----RKGK---RAVFYTKEVGQVALHPSSVNANQ 938
YS + E+V +L AGLYPN++Q + R+GK +V Y + G + LH S++N
Sbjct: 1038 EYSEEEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSVTYRTKSGNILLHKSTINREA 1097
Query: 939 NNFPLPYMVYSEMVKTN-NINVYDSTNISEYALLL 972
++ Y VK+N ++ V DS+ + A+LL
Sbjct: 1098 TRLRSRWLTYFMAVKSNGSVFVRDSSQVHPLAVLL 1132
Score = 418 (152.2 bits), Expect = 2.9e-117, Sum P(2) = 2.9e-117
Identities = 84/197 (42%), Positives = 117/197 (59%)
Query: 280 KLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQPX 339
+LP + L A+ ++ V+V+SG+TGCGKTT++PQ +LE +S RGA CN+I TQP
Sbjct: 461 QLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYVSEGRGARCNVIITQPR 520
Query: 340 XXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQT-RLLFCTTGVLLRQLVEDPDLSC 398
E G +L VG+Q+RLESK A+ LLFCT G+LLR+L +P L
Sbjct: 521 RISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSNPSLEG 580
Query: 399 VSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGNAPTVHIP 458
VSH++VDE+HER +N DF MSAT + + FS+YFG P + +P
Sbjct: 581 VSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVP 640
Query: 459 GLTFPVTDLFLEDVLEK 475
G +PV + +LED+L K
Sbjct: 641 GFMYPVKEHYLEDILAK 657
Score = 150 (57.9 bits), Expect = 1.8e-45, Sum P(2) = 1.8e-45
Identities = 49/176 (27%), Positives = 82/176 (46%)
Query: 886 NRYSHDLEMVCAILCAGLYPNVVQCK-----RKGK---RAVFYTKEVGQVALHPSSVNAN 937
N YS + E+V +L AGLYPN++Q + R+GK +V Y + G + LH S++N
Sbjct: 1037 NEYSEEEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSVTYRTKSGNILLHKSTINRE 1096
Query: 938 QNNFPLPYMVYSEMVKTN-NINVYDSTNISEYA-LLLFGGNLIPSKTGEGIEML---GGY 992
++ Y VK+N ++ V DS+ + A LLL G++ G +
Sbjct: 1097 ATRLRSRWLTYFMAVKSNGSVFVRDSSQVHPLAVLLLTDGDVHIRDDGRRATISLSDSDL 1156
Query: 993 LHFSASKTVLELIRKLRGELDKLLNRKIEDPRVDL----SVEGKAVVSAVVELLHG 1044
L + L+R+LR L +++ R + L E +++ + ELL G
Sbjct: 1157 LRLEGDSRTVRLLRELRRALGRMVERSLRSELAALPPGVQQEHGQLLALLAELLRG 1212
Score = 41 (19.5 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 21/79 (26%), Positives = 37/79 (46%)
Query: 713 LQLGTVGSFLSKAL--QPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIG 770
L LG LS + +P PL+ + L + + L+ P+ + LPVDP+
Sbjct: 412 LPLGKDSGPLSDPITGKPYVPLSEAEEVRLSQNL--LELWRRRGPVWQEAPQLPVDPH-- 467
Query: 771 KMLLMGAIFQCLNPALTIA 789
+ ++ AI Q +P + I+
Sbjct: 468 RDTILNAIEQ--HPVVVIS 484
>UNIPROTKB|E2RL62 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:LHKEERY EMBL:AAEX03012236
Ensembl:ENSCAFT00000020710 NextBio:20852259 Uniprot:E2RL62
Length = 1222
Score = 771 (276.5 bits), Expect = 3.0e-117, Sum P(2) = 3.0e-117
Identities = 179/455 (39%), Positives = 269/455 (59%)
Query: 536 IDLGLVESTIEYICRHEGDGAILVFLTGWNDISKLLDQIKVNKFLG-DPNKFLVLPLHGS 594
+DL LV + +I G IL FL GW +I + Q ++ + LG +K+L+LP+H +
Sbjct: 678 LDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGV--QQRLQEALGMHESKYLILPVHSN 735
Query: 595 MPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLL 654
+P ++Q+ IF +PP RKIVLATNIAE+SIT++D+V+VVD G KE YD K++CL
Sbjct: 736 IPMMDQKAIFQQPPVGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLE 795
Query: 655 PSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQLPEILRTPLQELCLHIK-SL 713
W+S+A+ QRRGRAGR Q G Y L+PR + M+P+Q+PEILRTPL+ L L K +
Sbjct: 796 TVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKIHM 855
Query: 714 QLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGKML 773
T FLSKA+ P+ AV A+ LL+ IG LD E LT LG+ L + DP + K +
Sbjct: 856 PEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAI 915
Query: 774 LMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGY 833
++ AIF+CL+P L + + L R+PF + + EVD+ K + DS SDH+A ++A G+
Sbjct: 916 VLAAIFRCLHPLLVVVSCLT-RDPFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAGW 974
Query: 834 KDAKR--NRRERD-FCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKG---PSAY-N 886
++ R +R R+ + EN L +L+ + + QF + + + V K SA N
Sbjct: 975 EEVLRWQDRSSRENYLEENLLYAPSLRFIHGLIKQFSENIYEAFLVGKPSDCTLASAQCN 1034
Query: 887 RYSHDLEMVCAILCAGLYPNVVQCK-----RKGK---RAVFYTKEVGQVALHPSSVNANQ 938
YS + E+V +L AGLYPN++Q + R+GK +V Y + G + LH S++N
Sbjct: 1035 EYSEEEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSVTYRTKSGNILLHKSTINREA 1094
Query: 939 NNFPLPYMVYSEMVKTN-NINVYDSTNISEYALLL 972
++ Y VK+N ++ V DS+ + A+LL
Sbjct: 1095 TRLRSRWLTYFMAVKSNGSVFVRDSSQVHPLAVLL 1129
Score = 418 (152.2 bits), Expect = 3.0e-117, Sum P(2) = 3.0e-117
Identities = 84/197 (42%), Positives = 117/197 (59%)
Query: 280 KLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQPX 339
+LP + L A+ ++ V+V+SG+TGCGKTT++PQ +LE +S RGA CN+I TQP
Sbjct: 461 QLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYVSEGRGARCNVIITQPR 520
Query: 340 XXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQT-RLLFCTTGVLLRQLVEDPDLSC 398
E G +L VG+Q+RLESK A+ LLFCT G+LLR+L +P L
Sbjct: 521 RISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSNPSLEG 580
Query: 399 VSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGNAPTVHIP 458
VSH++VDE+HER +N DF MSAT + + FS+YFG P + +P
Sbjct: 581 VSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVP 640
Query: 459 GLTFPVTDLFLEDVLEK 475
G +PV + +LED+L K
Sbjct: 641 GFMYPVKEHYLEDILAK 657
Score = 150 (57.9 bits), Expect = 1.8e-45, Sum P(2) = 1.8e-45
Identities = 49/176 (27%), Positives = 82/176 (46%)
Query: 886 NRYSHDLEMVCAILCAGLYPNVVQCK-----RKGK---RAVFYTKEVGQVALHPSSVNAN 937
N YS + E+V +L AGLYPN++Q + R+GK +V Y + G + LH S++N
Sbjct: 1034 NEYSEEEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSVTYRTKSGNILLHKSTINRE 1093
Query: 938 QNNFPLPYMVYSEMVKTN-NINVYDSTNISEYA-LLLFGGNLIPSKTGEGIEML---GGY 992
++ Y VK+N ++ V DS+ + A LLL G++ G +
Sbjct: 1094 ATRLRSRWLTYFMAVKSNGSVFVRDSSQVHPLAVLLLTDGDVHIRDDGRRATISLSDSDL 1153
Query: 993 LHFSASKTVLELIRKLRGELDKLLNRKIEDPRVDL----SVEGKAVVSAVVELLHG 1044
L + L+R+LR L +++ R + L E +++ + ELL G
Sbjct: 1154 LRLEGDSRTVRLLRELRRALGRMVERSLRSELAALPPGVQQEHGQLLALLAELLRG 1209
Score = 41 (19.5 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 21/79 (26%), Positives = 37/79 (46%)
Query: 713 LQLGTVGSFLSKAL--QPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIG 770
L LG LS + +P PL+ + L + + L+ P+ + LPVDP+
Sbjct: 412 LPLGKDSGPLSDPITGKPYVPLSEAEEVRLSQNL--LELWRRRGPVWQEAPQLPVDPH-- 467
Query: 771 KMLLMGAIFQCLNPALTIA 789
+ ++ AI Q +P + I+
Sbjct: 468 RDTILNAIEQ--HPVVVIS 484
>UNIPROTKB|H7BXY3 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HGNC:HGNC:16716 EMBL:AC139667 EMBL:AC026318
ProteinModelPortal:H7BXY3 SMR:H7BXY3 PRIDE:H7BXY3
Ensembl:ENST00000348968 Bgee:H7BXY3 Uniprot:H7BXY3
Length = 1166
Score = 772 (276.8 bits), Expect = 4.6e-117, Sum P(2) = 4.6e-117
Identities = 180/455 (39%), Positives = 269/455 (59%)
Query: 536 IDLGLVESTIEYICRHEGDGAILVFLTGWNDISKLLDQIKVNKFLG-DPNKFLVLPLHGS 594
+DL LV + +I G IL FL GW +I + Q ++ + LG +K+L+LP+H +
Sbjct: 622 LDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGV--QQRLQEALGMHESKYLILPVHSN 679
Query: 595 MPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLL 654
+P ++Q+ IF +PP RKIVLATNIAE+SITI+D+V+VVD G KE YD K++CL
Sbjct: 680 IPMMDQKAIFQQPPVGVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLE 739
Query: 655 PSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQLPEILRTPLQELCLHIK-SL 713
W+S+A+ QRRGRAGR Q G Y L+PR + M+P+Q+PEILRTPL+ L L K +
Sbjct: 740 TVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKIHM 799
Query: 714 QLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGKML 773
T FLSKA+ P+ AV A+ LL+ IG LD E LT LG+ L + DP + K +
Sbjct: 800 PEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAI 859
Query: 774 LMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGY 833
++ AIF+CL+P L + + L R+PF + + EVD+ K + DS SDH+A ++A G+
Sbjct: 860 VLAAIFRCLHPLLVVVSCLT-RDPFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAGW 918
Query: 834 KDAKR--NRRERD-FCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKG---PSAY-N 886
++ R +R R+ + EN L +L+ + + QF + + + V K SA N
Sbjct: 919 EEVLRWQDRSSRENYLEENLLYAPSLRFIHGLIKQFSENIYEAFLVGKPSDCTLASAQCN 978
Query: 887 RYSHDLEMVCAILCAGLYPNVVQCK-----RKGK---RAVFYTKEVGQVALHPSSVNANQ 938
YS + E+V +L AGLYPN++Q + R+GK +V Y + G + LH S++N
Sbjct: 979 EYSEEEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSVTYRTKSGNILLHKSTINREA 1038
Query: 939 NNFPLPYMVYSEMVKTN-NINVYDSTNISEYALLL 972
++ Y VK+N ++ V DS+ + A+LL
Sbjct: 1039 TRLRSRWLTYFMAVKSNGSVFVRDSSQVHPLAVLL 1073
Score = 412 (150.1 bits), Expect = 4.6e-117, Sum P(2) = 4.6e-117
Identities = 82/197 (41%), Positives = 117/197 (59%)
Query: 280 KLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQPX 339
+LP + L A+ ++ V+V+SG+TGCGKTT++PQ +LE ++ RGA CN+I TQP
Sbjct: 405 QLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTEGRGARCNVIITQPR 464
Query: 340 XXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQT-RLLFCTTGVLLRQLVEDPDLSC 398
E G +L VG+Q+RLESK ++ LLFCT G+LLR+L +P L
Sbjct: 465 RISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPSRGGALLFCTVGILLRKLQSNPSLEG 524
Query: 399 VSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGNAPTVHIP 458
VSH++VDE+HER +N DF MSAT + + FS+YFG P + +P
Sbjct: 525 VSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVP 584
Query: 459 GLTFPVTDLFLEDVLEK 475
G +PV + +LED+L K
Sbjct: 585 GFMYPVKEHYLEDILAK 601
>UNIPROTKB|F1SLI4 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0042645 "mitochondrial nucleoid" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0003676
GO:GO:0042645 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:LHKEERY EMBL:CU633694 Ensembl:ENSSSCT00000012419
Uniprot:F1SLI4
Length = 1222
Score = 774 (277.5 bits), Expect = 4.6e-117, Sum P(2) = 4.6e-117
Identities = 180/455 (39%), Positives = 269/455 (59%)
Query: 536 IDLGLVESTIEYICRHEGDGAILVFLTGWNDISKLLDQIKVNKFLG-DPNKFLVLPLHGS 594
+DL LV + +I G IL FL GW +I + Q ++ + LG +K+L+LP+H +
Sbjct: 678 LDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGV--QQRLQEALGMHESKYLILPVHSN 735
Query: 595 MPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLL 654
+P ++Q+ IF +PP RKIVLATNIAE+SITI+D+V+VVD G KE YD K++CL
Sbjct: 736 IPMMDQKAIFQQPPVGVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLE 795
Query: 655 PSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQLPEILRTPLQELCLHIK-SL 713
W+S+A+ QRRGRAGR Q G Y L+PR + M+P+Q+PEILRTPL+ L L K +
Sbjct: 796 TVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKIHM 855
Query: 714 QLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGKML 773
T FLSKA+ P+ AV A+ LL+ IG LD E LT LG+ L + DP + K +
Sbjct: 856 PEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAI 915
Query: 774 LMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGY 833
++ AIF+CL+P L + + L R+PF + + EVD+ K + DS SDH+A ++A G+
Sbjct: 916 VLAAIFRCLHPLLVVVSCLT-RDPFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVSGW 974
Query: 834 KDAKR--NRRERD-FCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKG---PSAY-N 886
++ R +R R+ + EN L +L+ + + QF + + + V K SA N
Sbjct: 975 EEVLRWQDRSSRENYLEENLLYAPSLRFIHGLIKQFSENIYEAFLVGKPSDCTLASAQCN 1034
Query: 887 RYSHDLEMVCAILCAGLYPNVVQCK-----RKGK---RAVFYTKEVGQVALHPSSVNANQ 938
YS + E+V +L AGLYPN++Q + R+GK +V Y + G + LH S++N
Sbjct: 1035 EYSEEEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSVTYRTKSGNILLHKSTINREA 1094
Query: 939 NNFPLPYMVYSEMVKTN-NINVYDSTNISEYALLL 972
++ Y VK+N ++ V DS+ + A+LL
Sbjct: 1095 TRLRSRWLTYFMAVKSNGSVFVRDSSQVHPLAVLL 1129
Score = 413 (150.4 bits), Expect = 4.6e-117, Sum P(2) = 4.6e-117
Identities = 103/295 (34%), Positives = 155/295 (52%)
Query: 189 GSTEKELQMSIETERRVGNLLNSSQGNVPVNDSGIESSEVARRPKLSVKVANTISPPQSD 248
G T++ +I+ + + + + PV++S I S E+ R + S P SD
Sbjct: 367 GETQRR-PCTIQVPEPILRKIETFLNHYPVDNSWI-SPEL-RLQGDDILPLGKDSGPLSD 423
Query: 249 SAKERLNVILKERQEKLKSSDSGKAMLSFR-------EKLPAFKMKAEFLKAVAENQVLV 301
+ V L E +E L+ S + + R +LP + L A+ ++ V+V
Sbjct: 424 PITGKPYVPLSEAEE-LRLSQNLLELWRRRGPVWQEAPQLPVDPHRDTILNAIEQHPVVV 482
Query: 302 VSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQPXXXXXXXXXXXXXXERGENLGET 361
++G+TGCGKTT++PQ +LE ++ RGA CN+I TQP E G +L
Sbjct: 483 IAGDTGCGKTTRIPQLLLERYVTEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRRN 542
Query: 362 VGYQIRLESKRSAQT-RLLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFXXXX 420
VG+Q+RLESK A+ LLFCT G+LLR+L +P L VSH++VDE+HER +N DF
Sbjct: 543 VGFQVRLESKPPARGGALLFCTVGILLRKLQSNPSLEGVSHVIVDEVHERDVNTDFLLIL 602
Query: 421 XXXXXXXXXXXXXXXMSATINADLFSKYFGNAPTVHIPGLTFPVTDLFLEDVLEK 475
MSAT + + FS+YFG P + +PG +PV + +LED+L K
Sbjct: 603 LKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHYLEDILAK 657
Score = 151 (58.2 bits), Expect = 5.0e-45, Sum P(2) = 5.0e-45
Identities = 49/176 (27%), Positives = 82/176 (46%)
Query: 886 NRYSHDLEMVCAILCAGLYPNVVQCK-----RKGK---RAVFYTKEVGQVALHPSSVNAN 937
N YS + E+V +L AGLYPN++Q + R+GK +V Y + G + LH S++N
Sbjct: 1034 NEYSEEEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSVTYRTKSGNILLHKSTINRE 1093
Query: 938 QNNFPLPYMVYSEMVKTN-NINVYDSTNISEYA-LLLFGGNLIPSKTGEGIEML---GGY 992
++ Y VK+N ++ V DS+ + A LLL G++ G +
Sbjct: 1094 ATRLRSRWLTYFMAVKSNGSVFVRDSSQVHPLAVLLLTDGDVHIRDDGRRATISLSDSDL 1153
Query: 993 LHFSASKTVLELIRKLRGELDKLLNRKIEDPRVDL----SVEGKAVVSAVVELLHG 1044
L + L+R+LR L +++ R + L E +++ + ELL G
Sbjct: 1154 LRLEGDSRTVRLLRELRRALGRMVERSLRSELATLPPCVQQEHGQLLALLAELLRG 1209
Score = 44 (20.5 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 21/77 (27%), Positives = 34/77 (44%)
Query: 713 LQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGKM 772
L LG LS + + + A EL + L+ P+ + LPVDP+ +
Sbjct: 412 LPLGKDSGPLSDPITGKPYVPLSEAEELRLSQNLLELWRRRGPVWQEAPQLPVDPH--RD 469
Query: 773 LLMGAIFQCLNPALTIA 789
++ AI Q +P + IA
Sbjct: 470 TILNAIEQ--HPVVVIA 484
>UNIPROTKB|Q2NKY8 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9913 "Bos taurus" [GO:0042645 "mitochondrial nucleoid"
evidence=ISS] [GO:0003682 "chromatin binding" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003682 GO:GO:0003723 GO:GO:0042645
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:BC111349
IPI:IPI00717186 RefSeq:NP_001070003.1 UniGene:Bt.24588
ProteinModelPortal:Q2NKY8 SMR:Q2NKY8 PRIDE:Q2NKY8 GeneID:767607
KEGG:bta:767607 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
InParanoid:Q2NKY8 KO:K13185 OrthoDB:EOG4VHK5M NextBio:20918019
Uniprot:Q2NKY8
Length = 1220
Score = 771 (276.5 bits), Expect = 6.0e-117, Sum P(2) = 6.0e-117
Identities = 180/455 (39%), Positives = 268/455 (58%)
Query: 536 IDLGLVESTIEYICRHEGDGAILVFLTGWNDISKLLDQIKVNKFLG-DPNKFLVLPLHGS 594
+DL LV + +I G IL FL GW +I + Q ++ + LG +K+L+LP+H +
Sbjct: 676 LDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGV--QQRLQEALGMHESKYLILPVHSN 733
Query: 595 MPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLL 654
+P ++Q+ IF +PP RKIVLATNIAE+SITI+D+V+VVD G KE YD K++CL
Sbjct: 734 IPMMDQKAIFQQPPIGVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLE 793
Query: 655 PSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQLPEILRTPLQELCLHIK-SL 713
W+S+A+ QRRGRAGR Q G Y L+PR + M P+Q+PEILRTPL+ L L K +
Sbjct: 794 TVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMAPFQVPEILRTPLENLVLQAKIHM 853
Query: 714 QLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGKML 773
T FLSKA+ P+ AV A+ LL+ IG LD E LT LG+ L + DP + K +
Sbjct: 854 PEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAI 913
Query: 774 LMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGY 833
++ AIF+CL+P L + + L R+PF + + EVD+ K + DS SDH+A ++A G+
Sbjct: 914 VLAAIFRCLHPLLVVVSCLT-RDPFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVSGW 972
Query: 834 KDAKR--NRRERD-FCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKG---PSAY-N 886
++ R +R R+ + EN L +L+ + + QF + + + V K SA N
Sbjct: 973 EEVLRWQDRSSRENYLEENLLYAPSLRFIHGLIKQFSENIYEAFLVGKPSDCTLASAQCN 1032
Query: 887 RYSHDLEMVCAILCAGLYPNVVQCK-----RKGK---RAVFYTKEVGQVALHPSSVNANQ 938
YS + E+V +L AGLYPN++Q + R+GK +V Y + G + LH S++N
Sbjct: 1033 EYSEEEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSVTYRTKSGNILLHKSTINREA 1092
Query: 939 NNFPLPYMVYSEMVKTN-NINVYDSTNISEYALLL 972
++ Y VK+N ++ V DS+ + A+LL
Sbjct: 1093 TRLRSRWLTYFMAVKSNGSVFVRDSSQVHPLAVLL 1127
Score = 415 (151.1 bits), Expect = 6.0e-117, Sum P(2) = 6.0e-117
Identities = 113/326 (34%), Positives = 166/326 (50%)
Query: 163 AYNKGKALAV---SKVPLP--MYRPDLDERHGSTEKELQMSIETERRVGNLLNSSQGNVP 217
A NK K+L + + PL MY G T++ +I+ + + + + P
Sbjct: 334 ACNKLKSLGLVDRNNEPLTHAMYNLASLRELGETQRR-PCTIQVPEPILRKIETFLNHYP 392
Query: 218 VNDSGIESSEVARRPKLSVKVANTISPPQSDSAKERLNVILKERQEKLKSSDSGKAMLSF 277
V S I SSE+ + + + + S P SD + V L E +E L+ S S +
Sbjct: 393 VESSWI-SSELRLQGEDILPLGKD-SGPLSDPITGKPYVPLSEAEE-LRLSQSLLELWRR 449
Query: 278 R-------EKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGAD 330
R +LP + L A+ ++ V+V++G+TGCGKTT++PQ +LE ++ RGA
Sbjct: 450 RGPVWQEAPQLPVDPHRDTILNAIEQHPVVVIAGDTGCGKTTRIPQLLLERYVTEGRGAR 509
Query: 331 CNIICTQPXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQT-RLLFCTTGVLLRQ 389
CN+I TQP E G L VG+Q+RLESK A+ LLFCT G+LLR+
Sbjct: 510 CNVIITQPRRISAVSVAQRVSHELGPTLRRNVGFQVRLESKPPARGGALLFCTVGILLRK 569
Query: 390 LVEDPDLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYF 449
L +P L VSH++VDE HER +N DF MSAT + + FS+YF
Sbjct: 570 LQSNPSLEGVSHVVVDEEHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYF 629
Query: 450 GNAPTVHIPGLTFPVTDLFLEDVLEK 475
G P + +PG +PV + +LED+L K
Sbjct: 630 GGCPVIKVPGFMYPVKEHYLEDILAK 655
Score = 150 (57.9 bits), Expect = 3.8e-45, Sum P(2) = 3.8e-45
Identities = 49/176 (27%), Positives = 82/176 (46%)
Query: 886 NRYSHDLEMVCAILCAGLYPNVVQCK-----RKGK---RAVFYTKEVGQVALHPSSVNAN 937
N YS + E+V +L AGLYPN++Q + R+GK +V Y + G + LH S++N
Sbjct: 1032 NEYSEEEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSVTYRTKSGNILLHKSTINRE 1091
Query: 938 QNNFPLPYMVYSEMVKTN-NINVYDSTNISEYA-LLLFGGNLIPSKTGEGIEML---GGY 992
++ Y VK+N ++ V DS+ + A LLL G++ G +
Sbjct: 1092 ATRLRSRWLTYFMAVKSNGSVFVRDSSQVHPLAVLLLTDGDVHIRDDGRRATISLSDSDL 1151
Query: 993 LHFSASKTVLELIRKLRGELDKLLNRKIEDPRVDL----SVEGKAVVSAVVELLHG 1044
L + L+R+LR L +++ R + L E +++ + ELL G
Sbjct: 1152 LRLEGDSRTVRLLRELRRALGRMVERSLRSELAALPPCVQEEHGQLLALLAELLRG 1207
Score = 44 (20.5 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 21/77 (27%), Positives = 34/77 (44%)
Query: 713 LQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGKM 772
L LG LS + + + A EL + L+ P+ + LPVDP+ +
Sbjct: 410 LPLGKDSGPLSDPITGKPYVPLSEAEELRLSQSLLELWRRRGPVWQEAPQLPVDPH--RD 467
Query: 773 LLMGAIFQCLNPALTIA 789
++ AI Q +P + IA
Sbjct: 468 TILNAIEQ--HPVVVIA 482
>UNIPROTKB|Q7L2E3 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0042645 "mitochondrial nucleoid" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003682
GO:GO:0003723 GO:GO:0042645 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OrthoDB:EOG4VHK5M EMBL:AB020697 EMBL:AK002076
EMBL:AK291266 EMBL:BC014237 EMBL:BC015029 EMBL:BC020126
EMBL:BC038417 IPI:IPI00411733 IPI:IPI00926109 IPI:IPI00927809
PIR:E56236 RefSeq:NP_055781.2 RefSeq:NP_619520.1 UniGene:Hs.517948
PDB:2DB2 PDBsum:2DB2 ProteinModelPortal:Q7L2E3 SMR:Q7L2E3
IntAct:Q7L2E3 MINT:MINT-1186537 STRING:Q7L2E3 PhosphoSite:Q7L2E3
DMDM:74758997 PaxDb:Q7L2E3 PRIDE:Q7L2E3 DNASU:22907
Ensembl:ENST00000445061 Ensembl:ENST00000446256
Ensembl:ENST00000457607 GeneID:22907 KEGG:hsa:22907 UCSC:uc003crt.3
UCSC:uc003cru.3 GeneCards:GC03P047844 HGNC:HGNC:16716 HPA:HPA034806
neXtProt:NX_Q7L2E3 PharmGKB:PA27217 InParanoid:Q7L2E3 OMA:LHKEERY
PhylomeDB:Q7L2E3 EvolutionaryTrace:Q7L2E3 GenomeRNAi:22907
NextBio:43571 ArrayExpress:Q7L2E3 Bgee:Q7L2E3 CleanEx:HS_DHX30
Genevestigator:Q7L2E3 Uniprot:Q7L2E3
Length = 1194
Score = 772 (276.8 bits), Expect = 7.0e-117, Sum P(2) = 7.0e-117
Identities = 180/455 (39%), Positives = 269/455 (59%)
Query: 536 IDLGLVESTIEYICRHEGDGAILVFLTGWNDISKLLDQIKVNKFLG-DPNKFLVLPLHGS 594
+DL LV + +I G IL FL GW +I + Q ++ + LG +K+L+LP+H +
Sbjct: 650 LDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGV--QQRLQEALGMHESKYLILPVHSN 707
Query: 595 MPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLL 654
+P ++Q+ IF +PP RKIVLATNIAE+SITI+D+V+VVD G KE YD K++CL
Sbjct: 708 IPMMDQKAIFQQPPVGVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLE 767
Query: 655 PSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQLPEILRTPLQELCLHIK-SL 713
W+S+A+ QRRGRAGR Q G Y L+PR + M+P+Q+PEILRTPL+ L L K +
Sbjct: 768 TVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKIHM 827
Query: 714 QLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGKML 773
T FLSKA+ P+ AV A+ LL+ IG LD E LT LG+ L + DP + K +
Sbjct: 828 PEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAI 887
Query: 774 LMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGY 833
++ AIF+CL+P L + + L R+PF + + EVD+ K + DS SDH+A ++A G+
Sbjct: 888 VLAAIFRCLHPLLVVVSCLT-RDPFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAGW 946
Query: 834 KDAKR--NRRERD-FCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKG---PSAY-N 886
++ R +R R+ + EN L +L+ + + QF + + + V K SA N
Sbjct: 947 EEVLRWQDRSSRENYLEENLLYAPSLRFIHGLIKQFSENIYEAFLVGKPSDCTLASAQCN 1006
Query: 887 RYSHDLEMVCAILCAGLYPNVVQCK-----RKGK---RAVFYTKEVGQVALHPSSVNANQ 938
YS + E+V +L AGLYPN++Q + R+GK +V Y + G + LH S++N
Sbjct: 1007 EYSEEEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSVTYRTKSGNILLHKSTINREA 1066
Query: 939 NNFPLPYMVYSEMVKTN-NINVYDSTNISEYALLL 972
++ Y VK+N ++ V DS+ + A+LL
Sbjct: 1067 TRLRSRWLTYFMAVKSNGSVFVRDSSQVHPLAVLL 1101
Score = 412 (150.1 bits), Expect = 7.0e-117, Sum P(2) = 7.0e-117
Identities = 82/197 (41%), Positives = 117/197 (59%)
Query: 280 KLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQPX 339
+LP + L A+ ++ V+V+SG+TGCGKTT++PQ +LE ++ RGA CN+I TQP
Sbjct: 433 QLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTEGRGARCNVIITQPR 492
Query: 340 XXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQT-RLLFCTTGVLLRQLVEDPDLSC 398
E G +L VG+Q+RLESK ++ LLFCT G+LLR+L +P L
Sbjct: 493 RISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPSRGGALLFCTVGILLRKLQSNPSLEG 552
Query: 399 VSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGNAPTVHIP 458
VSH++VDE+HER +N DF MSAT + + FS+YFG P + +P
Sbjct: 553 VSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVP 612
Query: 459 GLTFPVTDLFLEDVLEK 475
G +PV + +LED+L K
Sbjct: 613 GFMYPVKEHYLEDILAK 629
>UNIPROTKB|E2RID8 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:54505
GeneTree:ENSGT00550000074257 EMBL:AAEX03001437 RefSeq:XP_535238.2
Ensembl:ENSCAFT00000010821 GeneID:478060 KEGG:cfa:478060
NextBio:20853441 Uniprot:E2RID8
Length = 1367
Score = 1103 (393.3 bits), Expect = 1.4e-116, Sum P(2) = 1.4e-116
Identities = 259/713 (36%), Positives = 405/713 (56%)
Query: 363 GYQIRLESKRSAQTRLLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFXXXXXX 422
GYQIR+ES+ S TRLL+CTTGVLLR+L ED L+ VSH++VDE+HER + DF
Sbjct: 657 GYQIRMESRASESTRLLYCTTGVLLRKLQEDGLLTNVSHVIVDEVHERSVQSDFLLIILK 716
Query: 423 XXXXXXXXXXXXXMSATINADLFSKYFGNAPTVHIPGLTFPVTDLFLEDVLEKTRY---K 479
MSAT++++ FS YF + P + I G ++PV LED++E+T + K
Sbjct: 717 EILQKRSDLHLILMSATVDSEKFSTYFTHCPILRISGRSYPVEVFHLEDIVEETGFVLEK 776
Query: 480 MNSKLDSF-QGNXXXXXXQDSK----KDHLTAL----FEDVDIDSNYKNYRASTRASLEA 530
+ F + SK K H + D++ Y+ Y T+ ++
Sbjct: 777 DSEYCQKFLEEEEEITINVTSKAGGIKKHQEYIPVNTGSSADLNPFYQKYSNRTQHAILY 836
Query: 531 WSAEQIDLGLVESTIEYICRHEG----DGAILVFLTGWNDISKLLDQIKVNK-FLGDPNK 585
+ +I+L L+ + Y+ R +GA+L+FL G I +L D + ++ F + +
Sbjct: 837 MNPHKINLDLILELLIYLDRSPQFRNIEGAVLIFLPGLAHIQQLYDLLSTDRRFFSE--R 894
Query: 586 FLVLPLHGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYD 645
+ V+ LH + T +Q F PPP RKIVLATNIAE+ ITI DVV+V+D G+ KE Y
Sbjct: 895 YKVIALHSILSTQDQAAAFTLPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYH 954
Query: 646 ALNKLACLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQLPEILRTPLQE 705
++++ L+ +++SKASA QR+GRAGRV+ G C+++Y R + + Y +PEILR PL+E
Sbjct: 955 ESSQMSSLVETFVSKASALQRQGRAGRVRDGFCFRMYTRERFEGFMDYSVPEILRVPLEE 1014
Query: 706 LCLHIKSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDME-NLTPLGRHLCTLP 764
LCLHI LG+ FLSKAL PP + NA+ LL+ IGA + E LTPLG+HL LP
Sbjct: 1015 LCLHIMKCNLGSPEDFLSKALDPPQLQVISNAMNLLRKIGACELNEPTLTPLGQHLAALP 1074
Query: 765 VDPNIGKMLLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHI 824
V+ IGKML+ GAIF CL+P T+AA + ++PF P+ + E D AK + A SDH+
Sbjct: 1075 VNVKIGKMLIFGAIFGCLDPVATLAAVMTEKSPFTTPIGRKDEADLAKSALAMAD-SDHL 1133
Query: 825 ALLKAFDGYKDAKRN---RRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKG 881
+ A+ G+K A++ R E +C NFL+ +L +ED++ + + L+ GF +
Sbjct: 1134 TIYNAYLGWKKARQEGGYRSEIAYCRRNFLNRTSLLTLEDVKQELMKLVKAAGFSSSTTS 1193
Query: 882 PS-AYNRYSH-----DLEMVCAILCAGLYPNV---VQCKRKG---KRAVFYTKEVGQVAL 929
NR S ++ ++ A+L AGLY NV + K K A G+ +
Sbjct: 1194 NDWEENRASQTLPFQEIALLKAVLAAGLYDNVGKIIYTKSVDVTEKLACIVETAQGKAQV 1253
Query: 930 HPSSVNANQNNFPLPYMVYSEMVKTNNINVYDSTNISEYALLLFGGNLIPSKTGEGIEML 989
HPSSVN + + +++Y E V+ + + ++T I+ + +LLFGG+ I + E + +
Sbjct: 1254 HPSSVNRDLQTYG--WLLYQEKVRYTRVYLRETTLITPFPVLLFGGD-IEVQHRERLLSV 1310
Query: 990 GGYLHFSASKTVLELIRKLRGELDKLLNRKIEDPRVDLSVEGKAVVSAVVELL 1042
G+++F A + + ++LR +D +L +K+E+P+ +S+E ++ + EL+
Sbjct: 1311 DGWIYFQAPVKIAVIFKQLRVLIDSVLRKKLENPK--MSLENDKILQIITELI 1361
Score = 425 (154.7 bits), Expect = 7.0e-36, Sum P(2) = 7.0e-36
Identities = 116/341 (34%), Positives = 174/341 (51%)
Query: 154 AHQLGLHFHAYNKGKALAVSKVPLPMYRPD-LDERHGSTEKELQMSIETERR----VGNL 208
A LG Y K +V ++ P YR L+ +KE +ET + + L
Sbjct: 433 AQHLGATLALYRLVKGQSVHQLLPPTYRDVWLEWSDAEKKKEELNKMETNKPRDLFIAKL 492
Query: 209 LNS----SQGNVPVNDSGIESSEVARRPKLSVKVANTISPPQSDSAK-ERLNVILKERQE 263
LN Q +++ E+SE ++ S +S K E L + +
Sbjct: 493 LNKLKQQQQQQQQHSENKRENSEDPEESWENLVSDEDFSALSLESEKAEDLEPV-RNLFR 551
Query: 264 KLKSSDSGKAMLSFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEEL 323
KL+S+ + +L R++LP FK + ++ + ++V+VV+GETG GK+TQ+P F+LE+ L
Sbjct: 552 KLQSTPKYQRLLKERQQLPVFKHRNSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLL 611
Query: 324 SSLRGAD-CNIICTQPXXXXXXXXXXXXXXERG-EN----LGETVGYQIRLESKRSAQTR 377
+ G CNI+CTQP E G EN GYQIR+ES+ S TR
Sbjct: 612 LNEWGTSKCNIVCTQPRRISAVSLATRVCDELGCENGPGGRNSLCGYQIRMESRASESTR 671
Query: 378 LLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMS 437
LL+CTTGVLLR+L ED L+ VSH++VDE+HER + DF MS
Sbjct: 672 LLYCTTGVLLRKLQEDGLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDLHLILMS 731
Query: 438 ATINADLFSKYFGNAPTVHIPGLTFPVTDLFLEDVLEKTRY 478
AT++++ FS YF + P + I G ++PV LED++E+T +
Sbjct: 732 ATVDSEKFSTYFTHCPILRISGRSYPVEVFHLEDIVEETGF 772
Score = 66 (28.3 bits), Expect = 1.4e-116, Sum P(2) = 1.4e-116
Identities = 26/93 (27%), Positives = 46/93 (49%)
Query: 209 LNSSQGNVPVNDSG-IESSEVARRPKL-SVKVANTISPP-QSDSAKERLNVILKERQEKL 265
LN S +P S E + RPK S ++ T+SPP QS + K+ I +++EK
Sbjct: 162 LNLSDDALPEGFSQEFEEQQPKSRPKFQSPQIPATVSPPLQSKTKKQEDTKIKPKKEEKN 221
Query: 266 KSSDSGKAMLSFREKLPAFKMKAEFLKAVAENQ 298
+ + +L + E+ + K+E K++ E +
Sbjct: 222 LEVNMKEWILRYAEQQNE-EEKSENSKSLEEEE 253
Score = 53 (23.7 bits), Expect = 3.3e-115, Sum P(2) = 3.3e-115
Identities = 19/60 (31%), Positives = 31/60 (51%)
Query: 93 EQRWWDPVWRAERLRQQAAEMEVFDQNEWWGKLEQMKRGEEQEMIIKRKFSRADQQTLAD 152
E+ +DP ER AA++ + KLE+ K+G+++ RKF R + +TL D
Sbjct: 251 EEEKFDP---NERYLHLAAKLLDAKEQAATFKLEKNKQGQKEAQEKIRKFQR-EMETLED 306
>UNIPROTKB|Q5R607 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9601 "Pongo abelii" [GO:0003682 "chromatin binding"
evidence=ISS] [GO:0042645 "mitochondrial nucleoid" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0003723
GO:GO:0042645 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:22907
HOVERGEN:HBG081437 KO:K13185 EMBL:CR858337 EMBL:CR860693
RefSeq:NP_001125306.1 UniGene:Pab.19257 ProteinModelPortal:Q5R607
SMR:Q5R607 PRIDE:Q5R607 GeneID:100172205 KEGG:pon:100172205
InParanoid:Q5R607 Uniprot:Q5R607
Length = 1194
Score = 763 (273.6 bits), Expect = 3.5e-116, Sum P(2) = 3.5e-116
Identities = 178/455 (39%), Positives = 268/455 (58%)
Query: 536 IDLGLVESTIEYICRHEGDGAILVFLTGWNDISKLLDQIKVNKFLG-DPNKFLVLPLHGS 594
+DL LV + +I G IL FL GW +I + Q ++ + LG +K+L+LP+H +
Sbjct: 650 LDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGV--QQRLQEALGMHESKYLILPVHSN 707
Query: 595 MPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLL 654
+P ++Q+ IF +PP RKIVLATNIAE+S TI+D+V+VVD G KE YD K++CL
Sbjct: 708 IPMMDQKAIFQQPPVGVRKIVLATNIAETSTTINDIVHVVDSGLHKEERYDLKTKVSCLE 767
Query: 655 PSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQLPEILRTPLQELCLHIK-SL 713
W+S+A+ QRRGRAGR Q G Y L+PR + M+P+Q+PEILRTPL+ L L K +
Sbjct: 768 TVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKIHM 827
Query: 714 QLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGKML 773
T FLSKA+ P+ AV A+ LL+ IG LD E LT LG+ L + +P + K +
Sbjct: 828 PEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTEPRLAKAI 887
Query: 774 LMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGY 833
++ AIF+CL+P L + + L R+PF + + EVD+ K + DS SDH+A ++A G+
Sbjct: 888 VLAAIFRCLHPLLVVVSCLT-RDPFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAGW 946
Query: 834 KDAKR--NRRERD-FCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKG---PSAY-N 886
++ R +R R+ + EN L +L+ + + QF + + + V K SA N
Sbjct: 947 EEVLRWQDRSSRENYLEENLLYAPSLRFIHGLIKQFSENIYEAFLVGKPSDCTLASAQCN 1006
Query: 887 RYSHDLEMVCAILCAGLYPNVVQCK-----RKGK---RAVFYTKEVGQVALHPSSVNANQ 938
YS + E+V +L AGLYPN++Q + R+GK +V Y + G + LH S++N
Sbjct: 1007 EYSEEEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSVTYRTKSGNILLHKSTINREA 1066
Query: 939 NNFPLPYMVYSEMVKTN-NINVYDSTNISEYALLL 972
++ Y VK+N ++ V DS+ + A+LL
Sbjct: 1067 TRLRSRWLTYFMAVKSNGSVFVRDSSQVHPLAVLL 1101
Score = 415 (151.1 bits), Expect = 3.5e-116, Sum P(2) = 3.5e-116
Identities = 83/197 (42%), Positives = 117/197 (59%)
Query: 280 KLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQPX 339
+LP + L A+ ++ V+V+SG+TGCGKTT++PQ +LE ++ RGA CN+I TQP
Sbjct: 433 QLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTEGRGARCNVIITQPR 492
Query: 340 XXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQT-RLLFCTTGVLLRQLVEDPDLSC 398
E G +L VG+Q+RLESK A+ LLFCT G+LLR+L +P L
Sbjct: 493 RISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSNPSLEG 552
Query: 399 VSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGNAPTVHIP 458
VSH++VDE+HER +N DF MSAT + + FS+YFG P + +P
Sbjct: 553 VSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVP 612
Query: 459 GLTFPVTDLFLEDVLEK 475
G +PV + +LED+L K
Sbjct: 613 GFMYPVKEHYLEDILAK 629
>UNIPROTKB|E1B9N7 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 OMA:WLLYQEK GeneTree:ENSGT00550000074257
EMBL:DAAA02050346 IPI:IPI00907457 Ensembl:ENSBTAT00000013897
ArrayExpress:E1B9N7 Uniprot:E1B9N7
Length = 1367
Score = 1098 (391.6 bits), Expect = 1.6e-115, Sum P(2) = 1.6e-115
Identities = 255/713 (35%), Positives = 404/713 (56%)
Query: 363 GYQIRLESKRSAQTRLLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFXXXXXX 422
GYQIR+ES+ S TRLL+CTTGVLLR+L ED L+ VSH++VDE+HER + DF
Sbjct: 657 GYQIRMESRASESTRLLYCTTGVLLRKLQEDGLLTNVSHVIVDEVHERSVQSDFLLIILK 716
Query: 423 XXXXXXXXXXXXXMSATINADLFSKYFGNAPTVHIPGLTFPVTDLFLEDVLEKTRYKMNS 482
MSAT++ + FS YF + P + I G ++PV LED++E+T + +
Sbjct: 717 EILQKRSDLHLILMSATVDCEKFSTYFTHCPILRISGRSYPVEVFHLEDIIEETGFVLEK 776
Query: 483 KLDSFQG----------NXXXXXXQDSKKDHLTALFEDVDIDSN--YKNYRASTRASLEA 530
+ Q N K + D N Y+ Y + T+ ++
Sbjct: 777 DSEYCQKFLEEEEEITINVTTKAGGIKKYQEYIPVQTGTSADLNPFYQKYSSRTQHAILY 836
Query: 531 WSAEQIDLGLVESTIEYICRHEG----DGAILVFLTGWNDISKLLDQIKVNK-FLGDPNK 585
+ +I+L L+ + Y+ R +GA+L+FL G I +L D + ++ F + +
Sbjct: 837 MNPHKINLDLILELLTYLDRSPQFKNVEGAVLIFLPGLAHIQQLYDLLSTDRRFFSE--R 894
Query: 586 FLVLPLHGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYD 645
+ V+ LH + T +Q F PP RKIVLATNIAE+ ITI DVV+V+D G+ KE Y
Sbjct: 895 YKVIALHSILSTQDQAAAFTLPPQGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYH 954
Query: 646 ALNKLACLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQLPEILRTPLQE 705
++++ L+ +++SKASA QR+GRAGRV+ G C+++Y R + + Y +PEILR PL+E
Sbjct: 955 ESSQMSSLVETFVSKASALQRQGRAGRVRDGFCFRMYTRERFEGFMDYSVPEILRVPLEE 1014
Query: 706 LCLHIKSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDME-NLTPLGRHLCTLP 764
LCLHI LG+ FLSKAL PP + NA+ LL+ IGA + E LTPLG+HL LP
Sbjct: 1015 LCLHIMKCNLGSPEDFLSKALDPPQLQVISNAMNLLRKIGACELNEPKLTPLGQHLAALP 1074
Query: 765 VDPNIGKMLLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHI 824
V+ IGKML+ GAIF CL+P T+AA + ++PF+ P+ + E D AK + A SDH+
Sbjct: 1075 VNVKIGKMLIFGAIFGCLDPVATLAAVMTEKSPFITPIGRKDEADLAKSALAMAD-SDHL 1133
Query: 825 ALLKAFDGYKDAKRN---RRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKS-- 879
+ A+ G+K A++ R E +C +NFL+ +L +ED++ + + L+ GF+ +
Sbjct: 1134 TIYNAYLGWKKARQEGGYRSEIAYCRKNFLNRTSLLTLEDVKQELIKLVKAAGFLSSTTS 1193
Query: 880 ---KGPSAYNRYS-HDLEMVCAILCAGLYPNV---VQCKRKG---KRAVFYTKEVGQVAL 929
+G A S ++ ++ A+L AGLY NV + K K A G+ +
Sbjct: 1194 NSFEGNRATQTLSFQEIALLKAVLTAGLYDNVGKIIYTKSVDITEKLACIVETAQGKAQV 1253
Query: 930 HPSSVNANQNNFPLPYMVYSEMVKTNNINVYDSTNISEYALLLFGGNLIPSKTGEGIEML 989
HPSSVN + + +++Y E ++ + + ++T I+ + +LLFGG+ I + E + +
Sbjct: 1254 HPSSVNRDLQIYG--WLLYQEKIRYARVYLRETTLITPFPVLLFGGD-IEVQHRERLISV 1310
Query: 990 GGYLHFSASKTVLELIRKLRGELDKLLNRKIEDPRVDLSVEGKAVVSAVVELL 1042
G+++F A + + ++LR +D +L +K+E+P+ +S+E ++ + EL+
Sbjct: 1311 DGWIYFQAPVKIAVIFKQLRVLIDSVLRKKLENPK--MSLENDKILQIITELI 1361
Score = 426 (155.0 bits), Expect = 7.9e-37, Sum P(2) = 7.9e-37
Identities = 116/341 (34%), Positives = 174/341 (51%)
Query: 154 AHQLGLHFHAYNKGKALAVSKVPLPMYRPD-LDERHGSTEKELQMSIETERR----VGNL 208
A LG Y K +V ++ P YR L+ +KE +ET + + L
Sbjct: 433 AQHLGATLALYRLVKGQSVHQLLPPTYRDVWLEWSDAEKKKEELNKMETNKPRDLFIAKL 492
Query: 209 LNS----SQGNVPVNDSGIESSEVARRPKLSVKVANTISPPQSDSAK-ERLNVILKERQE 263
LN Q +++ E+SE ++ S +S K E L + +
Sbjct: 493 LNKLKQQQQQQQQHSENKRENSEDPEESWENLVSDEDFSALSLESEKVEDLEPV-RNLFR 551
Query: 264 KLKSSDSGKAMLSFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEEL 323
KL+S+ + +L R++LP FK ++ ++ + ++V+VV+GETG GK+TQ+P F+LE+ L
Sbjct: 552 KLQSTPKYQRLLKERQQLPVFKHRSSVVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLL 611
Query: 324 SSLRGAD-CNIICTQPXXXXXXXXXXXXXXERG-EN----LGETVGYQIRLESKRSAQTR 377
+ G CNI+CTQP E G EN GYQIR+ES+ S TR
Sbjct: 612 LNEWGTTKCNIVCTQPRRISAVSLATRVCDELGCENGPGGKNSLCGYQIRMESRASESTR 671
Query: 378 LLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMS 437
LL+CTTGVLLR+L ED L+ VSH++VDE+HER + DF MS
Sbjct: 672 LLYCTTGVLLRKLQEDGLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDLHLILMS 731
Query: 438 ATINADLFSKYFGNAPTVHIPGLTFPVTDLFLEDVLEKTRY 478
AT++ + FS YF + P + I G ++PV LED++E+T +
Sbjct: 732 ATVDCEKFSTYFTHCPILRISGRSYPVEVFHLEDIIEETGF 772
Score = 61 (26.5 bits), Expect = 1.6e-115, Sum P(2) = 1.6e-115
Identities = 19/60 (31%), Positives = 31/60 (51%)
Query: 93 EQRWWDPVWRAERLRQQAAEMEVFDQNEWWGKLEQMKRGEEQEMIIKRKFSRADQQTLAD 152
E+ +DP ER AA++ + KLE+ K+G+++ RKF R + +TL D
Sbjct: 250 EEEKFDP---NERYLHLAAKLLDAKEQAAAFKLEKNKQGQKEAQEKIRKFQRVEMETLED 306
Score = 55 (24.4 bits), Expect = 6.9e-115, Sum P(2) = 6.9e-115
Identities = 25/94 (26%), Positives = 42/94 (44%)
Query: 209 LNSSQGNVPVNDSG-IESSEVARRPKLSV-KVANTISPPQSDSAKERLN--VILKERQEK 264
LN S +P S E + RPK + TISPP K+R I+ ++ EK
Sbjct: 162 LNLSDDALPEGFSQEFEEQQPKSRPKFQYPQTQATISPPLQPKTKKREEDPKIMPKKDEK 221
Query: 265 LKSSDSGKAMLSFREKLPAFKMKAEFLKAVAENQ 298
+ + +L + E+ + K+E K++ E +
Sbjct: 222 KLEVNMKEWILRYAEQQN--EEKSETSKSLEEEK 253
>UNIPROTKB|I3LHZ6 [details] [associations]
symbol:DHX9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00550000074257 OMA:DDWIRLQ
Ensembl:ENSSSCT00000025297 Uniprot:I3LHZ6
Length = 1274
Score = 1130 (402.8 bits), Expect = 1.3e-114, P = 1.3e-114
Identities = 281/801 (35%), Positives = 428/801 (53%)
Query: 239 ANTISPPQSDSAKERLNVILK-ERQEKLKSSDSGKAMLSFREKLPAFKMKAEFLKAVAEN 297
+N P + + E+++V +K E +L+ +A+L RE LP K ++E L+A+++N
Sbjct: 341 SNIDEGPLAFATPEQISVEIKNELMYQLEQDRDLQAILQERELLPVKKFESEILEAISQN 400
Query: 298 QVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQPXXXXXXXXXXXXXXERGEN 357
V++V G TGCGKTTQ+PQFIL++ + + R A+CNI+ TQP ERGE
Sbjct: 401 PVVIVRGATGCGKTTQVPQFILDDFIQNDRAAECNIVVTQPRRISAVSVAERVAYERGEE 460
Query: 358 LGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFX 417
G++ GY +R ES + T +L + +E + +SH++VDEIHER +N DF
Sbjct: 461 PGKSCGYSVRFESILPRPHASIMFCTVGVLLRKLE-AGIRGISHVIVDEIHERDINTDFL 519
Query: 418 XXXXXXXXXXXXXXXXXXMSATINADLFSKYFGNAPTVHIPGLTFPVTDLFLEDVLEKTR 477
MSATI+ +F +YF N P + + G T+PV + FLED ++ T
Sbjct: 520 LVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCPIIEVYGRTYPVQEYFLEDCIQMTH 579
Query: 478 YKMNSKLDSFQGNXXXXXXQDSKKDHLTALFEDVDIDSNY---KNYRASTRASLEAWSAE 534
+ K KKD ED D + N Y A L + +
Sbjct: 580 FIPPPK-------------DKKKKDKDDDGSEDDDANCNLICGDEY-GLXMAQL---NEK 622
Query: 535 QIDLGLVESTIEYICRHEGDGAILVFLTGWNDISKLLDQIKVNKFLGDPNKFLVLPLHGS 594
+ L+E+ ++YI GA+LVFL GWN I + +++N G+ +++ +LPLH
Sbjct: 623 ETPFELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHFGN-HRYQILPLHSQ 681
Query: 595 MPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLL 654
+P QR++FD P K++L+TNIAE+SITI+DVVYV+D K K + A N +
Sbjct: 682 IPREEQRKVFDPVPAGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYA 741
Query: 655 PSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQLPEILRTPLQELCLHIKSLQ 714
W SK + QR+GRAGRV+PG C+ L R D + + PE+ RTPL E+ L IK L+
Sbjct: 742 TVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFDRLETHMTPEMFRTPLHEIALSIKLLR 801
Query: 715 LGTVGSFLSKALQPPDPL-AVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGKML 773
LG +G FL+KA++PP PL AV A L+ + ALD + LTPLGR L LP++P GKM+
Sbjct: 802 LGGIGQFLAKAIEPP-PLDAVIEAEHTLRELDALDANDELTPLGRILAKLPIEPRFGKMM 860
Query: 774 LMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGY 833
+MG IF + TI+AA PF+ + K + R+FAG+ SDH+ALL F +
Sbjct: 861 IMGCIFYVGDAICTISAATCFPEPFI---SEGKRLGYIHRNFAGNRFSDHVALLSVFQAW 917
Query: 834 KDAKRNRRERD--FCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYSHD 891
DA+ E + FC L+ TL+M + + Q ++L + GF + + D
Sbjct: 918 DDARMGGEEAEIRFCEHKRLNMATLRMTWEAKVQLKEILINSGFPEDCLLTQVFTNTGPD 977
Query: 892 --LEMVCAILCAGLYPNVVQCKRKGKRAVFYTKEVGQVAL-HPSSVN---ANQN-NFPLP 944
L++V ++L G+YPNV C K KR + T+ G+ AL H SSVN ++Q+ +P P
Sbjct: 978 NNLDVVISLLAFGVYPNV--CYHKEKRKILTTE--GRNALIHKSSVNCPFSSQDMKYPSP 1033
Query: 945 YMVYSEMVKTNNINVYDSTNISEYALLLFGGNLIPSKTGEGIEMLGGYLHFSASKTVLEL 1004
+ V+ E ++T I+ T ++ LLLF + S G+ I ++ ++ S
Sbjct: 1034 FFVFGEKIRTRAISAKGMTLVTPLQLLLFASKKVQSD-GQ-IVLVDDWIRLQISHEAAAC 1091
Query: 1005 IRKLRGELDKLLNRKIEDPRV 1025
I LR ++ L+ + P +
Sbjct: 1092 ITALRAAMEALVVEVTKQPDI 1112
>UNIPROTKB|Q7Z478 [details] [associations]
symbol:DHX29 "ATP-dependent RNA helicase DHX29"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005739
GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AY036974 EMBL:BC056219 EMBL:AL834496
EMBL:BX648101 EMBL:BX648269 EMBL:AL079292 EMBL:AF070639
IPI:IPI00217413 RefSeq:NP_061903.2 UniGene:Hs.740463
ProteinModelPortal:Q7Z478 SMR:Q7Z478 IntAct:Q7Z478
MINT:MINT-1376685 STRING:Q7Z478 PhosphoSite:Q7Z478 DMDM:110278938
PaxDb:Q7Z478 PeptideAtlas:Q7Z478 PRIDE:Q7Z478
Ensembl:ENST00000251636 GeneID:54505 KEGG:hsa:54505 UCSC:uc003jpx.3
CTD:54505 GeneCards:GC05M054552 H-InvDB:HIX0004866 HGNC:HGNC:15815
HPA:HPA038317 HPA:HPA038318 MIM:612720 neXtProt:NX_Q7Z478
PharmGKB:PA27215 HOGENOM:HOG000247063 HOVERGEN:HBG081436
InParanoid:Q7Z478 OMA:WLLYQEK OrthoDB:EOG43FGW2 PhylomeDB:Q7Z478
ChiTaRS:DHX29 GenomeRNAi:54505 NextBio:56869 Bgee:Q7Z478
CleanEx:HS_DHX29 Genevestigator:Q7Z478 GermOnline:ENSG00000067248
Uniprot:Q7Z478
Length = 1369
Score = 1096 (390.9 bits), Expect = 1.8e-114, Sum P(2) = 1.8e-114
Identities = 259/713 (36%), Positives = 404/713 (56%)
Query: 363 GYQIRLESKRSAQTRLLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFXXXXXX 422
GYQIR+ES+ TRLL+CTTGVLLR+L ED LS VSH++VDE+HER + DF
Sbjct: 660 GYQIRMESRACESTRLLYCTTGVLLRKLQEDGLLSNVSHVIVDEVHERSVQSDFLLIILK 719
Query: 423 XXXXXXXXXXXXXMSATINADLFSKYFGNAPTVHIPGLTFPVTDLFLEDVLEKTRY---K 479
MSAT++++ FS YF + P + I G ++PV LED++E+T + K
Sbjct: 720 EILQKRSDLHLILMSATVDSEKFSTYFTHCPILRISGRSYPVEVFHLEDIIEETGFVLEK 779
Query: 480 MNSKLDSF-QGNXXXXXXQDSKKDHLTALFEDVDI------DSN--YKNYRASTRASLEA 530
+ F + SK + E + + D N Y+ Y + T+ ++
Sbjct: 780 DSEYCQKFLEEEEEVTINVTSKAGGIKKYQEYIPVQTGAHADLNPFYQKYSSRTQHAILY 839
Query: 531 WSAEQIDLGLVESTIEYICRHEG----DGAILVFLTGWNDISKLLDQIKVNK-FLGDPNK 585
+ +I+L L+ + Y+ + +GA+L+FL G I +L D + ++ F + +
Sbjct: 840 MNPHKINLDLILELLAYLDKSPQFRNIEGAVLIFLPGLAHIQQLYDLLSNDRRFYSE--R 897
Query: 586 FLVLPLHGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYD 645
+ V+ LH + T +Q F PPP RKIVLATNIAE+ ITI DVV+V+D G+ KE Y
Sbjct: 898 YKVIALHSILSTQDQAAAFTLPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYH 957
Query: 646 ALNKLACLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQLPEILRTPLQE 705
++++ L+ +++SKASA QR+GRAGRV+ G C+++Y R + + Y +PEILR PL+E
Sbjct: 958 ESSQMSSLVETFVSKASALQRQGRAGRVRDGFCFRMYTRERFEGFMDYSVPEILRVPLEE 1017
Query: 706 LCLHIKSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDME-NLTPLGRHLCTLP 764
LCLHI LG+ FLSKAL PP + NA+ LL+ IGA + E LTPLG+HL LP
Sbjct: 1018 LCLHIMKCNLGSPEDFLSKALDPPQLQVISNAMNLLRKIGACELNEPKLTPLGQHLAALP 1077
Query: 765 VDPNIGKMLLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHI 824
V+ IGKML+ GAIF CL+P T+AA + ++PF P+ + E D AK + A SDH+
Sbjct: 1078 VNVKIGKMLIFGAIFGCLDPVATLAAVMTEKSPFTTPIGRKDEADLAKSALAMAD-SDHL 1136
Query: 825 ALLKAFDGYKDAKRN---RRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKG 881
+ A+ G+K A++ R E +C NFL+ +L +ED++ + + L+ GF +
Sbjct: 1137 TIYNAYLGWKKARQEGGYRSEITYCRRNFLNRTSLLTLEDVKQELIKLVKAAGFSSSTTS 1196
Query: 882 PS-AYNRYSHDLE-----MVCAILCAGLYPNV---VQCKRKG---KRAVFYTKEVGQVAL 929
S NR S L ++ A+L AGLY NV + K K A G+ +
Sbjct: 1197 TSWEGNRASQTLSFQEIALLKAVLVAGLYDNVGKIIYTKSVDVTEKLACIVETAQGKAQV 1256
Query: 930 HPSSVNANQNNFPLPYMVYSEMVKTNNINVYDSTNISEYALLLFGGNLIPSKTGEGIEML 989
HPSSVN + +++Y E ++ + + ++T I+ + +LLFGG+ I + E + +
Sbjct: 1257 HPSSVNRDLQTHG--WLLYQEKIRYARVYLRETTLITPFPVLLFGGD-IEVQHRERLLSI 1313
Query: 990 GGYLHFSASKTVLELIRKLRGELDKLLNRKIEDPRVDLSVEGKAVVSAVVELL 1042
G+++F A + + ++LR +D +L +K+E+P+ +S+E ++ + EL+
Sbjct: 1314 DGWIYFQAPVKIAVIFKQLRVLIDSVLRKKLENPK--MSLENDKILQIITELI 1364
Score = 421 (153.3 bits), Expect = 1.9e-35, Sum P(2) = 1.9e-35
Identities = 115/342 (33%), Positives = 176/342 (51%)
Query: 154 AHQLGLHFHAYNKGKALAVSKVPLPMYRPDLDERHGSTEKELQMS-IETERR----VGNL 208
A LG Y K +V ++ P YR E + +K +++ +ET + + L
Sbjct: 436 AQHLGATLALYRLVKGQSVHQLLPPTYRDVWLEWSDAEKKREELNKMETNKPRDLFIAKL 495
Query: 209 LNSSQGNVPVNDSGIESS-EVARRPKLSVKVANTISPPQ-SDSAKERLNVI----LKERQ 262
LN + E+ E + P+ S + N +S S + E NV ++
Sbjct: 496 LNKLKQQQQQQQQHSENKRENSEDPEESWE--NLVSDEDFSALSLESANVEDLEPVRNLF 553
Query: 263 EKLKSSDSGKAMLSFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEE 322
KL+S+ + +L R++LP FK + ++ + ++V+VV+GETG GK+TQ+P F+LE+
Sbjct: 554 RKLQSTPKYQKLLKERQQLPVFKHRDSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDL 613
Query: 323 L-SSLRGADCNIICTQPXXXXXXXXXXXXXXERG-EN----LGETVGYQIRLESKRSAQT 376
L + + CNI+CTQP E G EN GYQIR+ES+ T
Sbjct: 614 LLNEWEASKCNIVCTQPRRISAVSLANRVCDELGCENGPGGRNSLCGYQIRMESRACEST 673
Query: 377 RLLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXM 436
RLL+CTTGVLLR+L ED LS VSH++VDE+HER + DF M
Sbjct: 674 RLLYCTTGVLLRKLQEDGLLSNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDLHLILM 733
Query: 437 SATINADLFSKYFGNAPTVHIPGLTFPVTDLFLEDVLEKTRY 478
SAT++++ FS YF + P + I G ++PV LED++E+T +
Sbjct: 734 SATVDSEKFSTYFTHCPILRISGRSYPVEVFHLEDIIEETGF 775
Score = 53 (23.7 bits), Expect = 1.8e-114, Sum P(2) = 1.8e-114
Identities = 19/60 (31%), Positives = 31/60 (51%)
Query: 93 EQRWWDPVWRAERLRQQAAEMEVFDQNEWWGKLEQMKRGEEQEMIIKRKFSRADQQTLAD 152
E+ +DP ER AA++ + KLE+ K+G+++ RKF R + +TL D
Sbjct: 254 EEEKFDP---NERYLHLAAKLLDAKEQAATFKLEKNKQGQKEAQEKIRKFQR-EMETLED 309
>UNIPROTKB|G4MR96 [details] [associations]
symbol:MGG_04709 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
EMBL:CM001231 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 RefSeq:XP_003710833.1
EnsemblFungi:MGG_04709T0 GeneID:2677908 KEGG:mgr:MGG_04709
Uniprot:G4MR96
Length = 1504
Score = 1024 (365.5 bits), Expect = 6.4e-112, Sum P(2) = 6.4e-112
Identities = 263/736 (35%), Positives = 396/736 (53%)
Query: 171 AVSKVPLPMYRPDLDERHGSTEKELQMSIETE--RRVGNLLNSSQGNVPVNDSGIESSEV 228
A K+P P++R DL +K + + E + + L+ Q + D I
Sbjct: 581 AAMKLP-PVWR-DLWSELAEAKKSKADAADREILKELRALVRKKQDQ-ELEDGVIIQGAF 637
Query: 229 ARRPKLSVKVANTISPPQSDSAKERLNVILKERQEKL----KSSDSGKAMLSFREKLPAF 284
R + A T S SD + + + E +++ SS + ML R +LP +
Sbjct: 638 RGR---GARAAATDSAENSDHDRNKAAAVGPEYYQRIWYDKSSSPRYQNMLRSRMQLPMW 694
Query: 285 KMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQPXXXXXX 344
+ + L AV ++QV++V GETGCGK+TQ+P F+LE +L+ +G C I CT+P
Sbjct: 695 AFREQVLSAVDQHQVVIVCGETGCGKSTQVPSFLLEHQLA--QGKACKIYCTEPRRISAI 752
Query: 345 XXXXXXXXERGE---NLGET---VGYQIRLESKRSAQTRLLFCTTGVLLRQLVEDPDLSC 398
E GE +LG + VGY IRLE+ S +TRL+F TTG+++R L DL
Sbjct: 753 SLARRVSEELGEGRNDLGTSRSLVGYSIRLEANTSRETRLVFATTGIVMRMLEGSNDLRD 812
Query: 399 VSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGNAPTVHIP 458
++HL++DE+HER ++ DF MSAT++AD FS Y AP +++P
Sbjct: 813 ITHLVLDEVHERSIDSDFLLIVLKKLMTRRKDLKVVLMSATVDADRFSNYLDGAPVLNVP 872
Query: 459 GLTFPVTDLFLEDVLEKTRYKMNSKLDSFQGNXXXXXXQDSKKDHLTALFEDVDIDSNYK 518
G TFPV FLED +E T Y ++ K+ +D++ + ++ ++ + K
Sbjct: 873 GRTFPVQVNFLEDAVELTGYTIDQKVPQ---ERLVEIDEDAEVEPESS--SKTELLKSLK 927
Query: 519 NYRASTRASLEAWSAEQIDLGLVESTIEYICR----HEGDGAILVFLTGWNDISKLLDQI 574
Y TR +L +ID L+ I I + AILVFL G +I L D +
Sbjct: 928 GYSTRTRNTLAQMDEYKIDFDLIVQLISRIASDPNYQDYSKAILVFLPGIAEIRTLNDLL 987
Query: 575 KVNKFLGDPN---KFLVLPLHGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVV 631
LGD + +LV PLH ++ T Q F PP RKIVLATNIAE+ ITI DV
Sbjct: 988 -----LGDRSFQQNWLVYPLHSTIATEEQEAAFLVPPHGMRKIVLATNIAETGITIPDVT 1042
Query: 632 YVVDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDA-M 690
V+D GK +E +D +++ L+ ++IS+A+A QRRGRAGRVQ G+C+ ++ + HDA M
Sbjct: 1043 CVIDTGKHREMRFDERRQMSRLIDTFISRANAKQRRGRAGRVQQGLCFHMFTKYRHDAIM 1102
Query: 691 LPYQLPEILRTPLQELCLHIKSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDM 750
Q PE+LR LQ+L + +K ++G + LSKAL PP ++ AI+ L + AL
Sbjct: 1103 ADQQTPEMLRLSLQDLAIRVKICKIGGIEETLSKALDPPSAKNIRRAIDALIDVRALTQG 1162
Query: 751 ENLTPLGRHLCTLPVDPNIGKMLLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDE 810
E+LTPLG L LP+D +GK++L+G+IF+CL+ A+T+AA L+ ++PFV P + + D
Sbjct: 1163 EDLTPLGNQLARLPLDVFLGKLILLGSIFKCLDMAITVAAILSSKSPFVAPFGQRSQADT 1222
Query: 811 AKRSFA-GDSCSDHIALLKAFDGYKD----AKRNR-RERDFCWENFLSPITLQMMEDMRS 864
+ F GDS D + + A+ +K A N +E FC +NFLS TL +ED++
Sbjct: 1223 VRLGFRRGDS--DILTVYNAYLSWKRVCLAATGNSSQEFQFCRKNFLSQQTLANIEDLKG 1280
Query: 865 QFLDLLSDIGFVDKSK 880
Q L L D F+ ++
Sbjct: 1281 QLLVSLVDSKFLSMTE 1296
Score = 111 (44.1 bits), Expect = 6.4e-112, Sum P(2) = 6.4e-112
Identities = 35/131 (26%), Positives = 63/131 (48%)
Query: 897 AILCAGLYPNVVQCKRKGKRAVFYTKEVGQVALHPSSVNANQNNFPLPYMVYSEMVKTNN 956
A+L YP ++ G + + ++LH SSVN N + +M Y M+++
Sbjct: 1338 AVLSWSFYPKLLVRDVAGGKGLRNVGNNQNISLHRSSVNRGHNE--IRWMSYYHMMQSTK 1395
Query: 957 --INVYDSTNISEYALLLFGGNLIPSKTGEGIEMLGGYLHFSAS--KTVLELIRKLRGEL 1012
+N +++T + +A+ L G++ M G F+A KTVL +++ LR L
Sbjct: 1396 SALNAHETTAVEPFAIALLCGDVRCDMYSGVFVMDGNRARFAAPDWKTVL-VVKTLRSRL 1454
Query: 1013 DKLLNRKIEDP 1023
+LL R ++P
Sbjct: 1455 RELLTRSFKNP 1465
>UNIPROTKB|E1C388 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 CTD:54505 OMA:WLLYQEK
GeneTree:ENSGT00550000074257 EMBL:AADN02054528 EMBL:AADN02054529
EMBL:AADN02054530 IPI:IPI00580778 RefSeq:XP_424728.2
UniGene:Gga.12357 Ensembl:ENSGALT00000023700 GeneID:427136
KEGG:gga:427136 NextBio:20828443 Uniprot:E1C388
Length = 1372
Score = 1103 (393.3 bits), Expect = 9.7e-112, P = 9.7e-112
Identities = 258/712 (36%), Positives = 403/712 (56%)
Query: 363 GYQIRLESKRSAQTRLLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFXXXXXX 422
GYQIR+ES+ TRLL+CTTGVLLR+L ED LS +SH++VDE+HER ++ DF
Sbjct: 661 GYQIRMESRTGEATRLLYCTTGVLLRKLQEDGLLSSISHVIVDEVHERSVHSDFLLVILK 720
Query: 423 XXXXXXXXXXXXXMSATINADLFSKYFGNAPTVHIPGLTFPVTDLFLEDVLEKTRY---K 479
MSAT++++ FS YF + P + I G ++PV +EDV+E T Y K
Sbjct: 721 EILHKRSDLHLILMSATVDSEKFSSYFAHCPILRISGRSYPVEVFHVEDVIEATGYVLEK 780
Query: 480 MNSKLDSFQGNXXXXXXQDSKKDHLTALFED---------VDIDSNYKNYRASTRASLEA 530
+ F + K T +++ +D+ Y+ Y + T+ ++
Sbjct: 781 DSEYCQKFLEEEEEIMINVTTKGGGTTKYQEYVPVQSGSGIDLSPYYQKYSSRTQQAVFY 840
Query: 531 WSAEQIDLGLVESTIEYICRH----EGDGAILVFLTGWNDISKLLDQIKVNKFLGDPNKF 586
+ +I+L L+ + Y+ R +GA+L+FL G I +L D I ++ ++
Sbjct: 841 MNPYKINLELILELLAYLDRSPQFKNTEGAVLIFLPGLAHIQQLYDLISTDRRFSLCDRH 900
Query: 587 LVLPLHGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDA 646
++ LH + T +Q F PP RKIVLATNIAE+ ITI DVV+V+D G+ KE Y
Sbjct: 901 RLIALHSVLSTQDQAAAFTVPPLGVRKIVLATNIAETGITIPDVVFVIDSGRTKENRYHE 960
Query: 647 LNKLACLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQLPEILRTPLQEL 706
++++ L +++SKASA QR+GRAGRV+ G C+++Y R ++ + Y +PEILR PL+EL
Sbjct: 961 SSQMSSLEETFVSKASALQRQGRAGRVRDGFCFRMYTRDRFESFMEYSVPEILRVPLEEL 1020
Query: 707 CLHIKSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDME-NLTPLGRHLCTLPV 765
CLHI LG+ FLS+AL PP P + NA+ LL+ IGA E LTPLG+HL LPV
Sbjct: 1021 CLHIMKCNLGSPEDFLSRALDPPQPQVIGNAMNLLRKIGACQLNEPKLTPLGQHLAALPV 1080
Query: 766 DPNIGKMLLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIA 825
+ IGKML+ GAIF CL+P T+AA + ++PF P+ + E D AK S A + SDH+
Sbjct: 1081 NVKIGKMLIFGAIFGCLDPVATLAAVMTEKSPFTTPIGRKDEADLAKSSIAL-AVSDHLT 1139
Query: 826 LLKAFDGYKDAKR---NRRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFV-----D 877
+ A+ G+K A++ +R E +C NFL+ +L +ED++ + + L+ GF
Sbjct: 1140 IYNAYLGWKKARQEGGHRAEMTYCRRNFLNRTSLLTLEDVKQELIKLVRAAGFTAPTTQH 1199
Query: 878 KSKGPSAYNRYS-HDLEMVCAILCAGLYPNVVQCK-RKG-----KRAVFYTKEVGQVALH 930
+ G S H++ ++ A+L AGLY NV + K K A G+ +H
Sbjct: 1200 RLDGNGGTQSLSLHEIALLKAVLTAGLYDNVGKIMYTKSVDITEKLACLVETAQGKAQVH 1259
Query: 931 PSSVNANQNNFPLPYMVYSEMVKTNNINVYDSTNISEYALLLFGGNLIPSKTGEGIEMLG 990
PSSVN + +++Y E V+ + + ++T IS + +LLFGG+ I + E + +
Sbjct: 1260 PSSVNRDLQVHG--WLLYQEKVRYAKVYLRETTLISPFPILLFGGD-IEVQHREHLLTVD 1316
Query: 991 GYLHFSASKTVLELIRKLRGELDKLLNRKIEDPRVDLSVEGKAVVSAVVELL 1042
G++HF A + + ++LR ++ +L +K+E+P+ +S+E V+ + EL+
Sbjct: 1317 GWIHFQAPVKIAVIFKQLRVLIESVLQKKLENPK--MSLEDDKVLHIIKELI 1366
Score = 425 (154.7 bits), Expect = 6.3e-36, P = 6.3e-36
Identities = 119/374 (31%), Positives = 187/374 (50%)
Query: 121 WWGKLEQMKRGEEQEMIIKRKFSRADQQTLADMAHQLGLHFHAYNKGKALAVSKVPLPMY 180
+W ++ R + M + D +A L L +H KG++ V ++ P Y
Sbjct: 412 YWKCRVRVTRSSDDVMTMCPTIVTEDSMQAQHLAATLAL-YHL-TKGQS--VHQLLPPTY 467
Query: 181 RPD-LDERHGSTEKELQMSIETERR----VGNLLNSSQGNVPVNDSGIESSEVARRPK-- 233
R L+ +KE + IET + + LLN + + + ++V+ P+
Sbjct: 468 RDVWLEWSDIEKKKEEENKIETNKPRDNFIAKLLNKLKQQQQLQSE--KQTKVSEGPEDS 525
Query: 234 ----LSVKVANTISPPQSDSAKERLNVILKERQEKLKSSDSGKAMLSFREKLPAFKMKAE 289
+S + N +S +D+ + L + KL+SS + L R++LP FK +
Sbjct: 526 WENLVSDEDFNNLSLETADT--DNLEPS-RNLFRKLQSSSRYQKFLKERQELPVFKHRHS 582
Query: 290 FLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQPXXXXXXXXXXX 349
++ + +++V+VV+GETG GK+TQ+P F+LE+ L CNI+CTQP
Sbjct: 583 IVETLKKHRVVVVAGETGSGKSTQVPHFLLEDLLLDEGTRKCNIVCTQPRRISAVSLATR 642
Query: 350 XXXERGENLG-----ETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVEDPDLSCVSHLLV 404
E G G GYQIR+ES+ TRLL+CTTGVLLR+L ED LS +SH++V
Sbjct: 643 VCEELGCESGPGGKNSLCGYQIRMESRTGEATRLLYCTTGVLLRKLQEDGLLSSISHVIV 702
Query: 405 DEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGNAPTVHIPGLTFPV 464
DE+HER ++ DF MSAT++++ FS YF + P + I G ++PV
Sbjct: 703 DEVHERSVHSDFLLVILKEILHKRSDLHLILMSATVDSEKFSSYFAHCPILRISGRSYPV 762
Query: 465 TDLFLEDVLEKTRY 478
+EDV+E T Y
Sbjct: 763 EVFHVEDVIEATGY 776
>DICTYBASE|DDB_G0275313 [details] [associations]
symbol:dhx9 "ATP-dependent RNA helicase"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISS] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 dictyBase:DDB_G0275313 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GenomeReviews:CM000151_GR EMBL:AAFI02000013
GO:GO:0003725 GO:GO:0004003 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 RefSeq:XP_643861.1 ProteinModelPortal:Q869Z1
EnsemblProtists:DDB0233740 GeneID:8619912 KEGG:ddi:DDB_G0275313
InParanoid:Q869Z1 OMA:CEYLLEN Uniprot:Q869Z1
Length = 1472
Score = 591 (213.1 bits), Expect = 7.8e-108, Sum P(3) = 7.8e-108
Identities = 119/251 (47%), Positives = 167/251 (66%)
Query: 554 DGAILVFLTGWNDISKLLDQIKVNKFLGDPNKFLVLPLHGSMPTINQREIFDRPPPNKRK 613
+ +IL+FL GW DIS+ + ++ + L + N+FL+LPLH S+ Q ++F++PPP RK
Sbjct: 949 EDSILIFLPGWEDISQTRELMRRHPMLRNENEFLILPLHSSVSMQLQAKVFEKPPPKIRK 1008
Query: 614 IVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRV 673
IVL+TNIAE+SITI+DVVYV+D K K ++ L W K+S QRRGRAGRV
Sbjct: 1009 IVLSTNIAETSITINDVVYVIDSAKVKLKYHETQRDLTLFQTVWACKSSLKQRRGRAGRV 1068
Query: 674 QP-GVCYKLYPRIIHDAMLPYQLPEILRTPLQELCLHIKSLQLGTVGSFLSKALQPPDPL 732
+ GVCY + R ++ + +QL E+ R PL ELCL +K L LG V FLS+AL+PP+
Sbjct: 1069 RKDGVCYHMVSRDRYNTLEEFQLSEMRRMPLHELCLQVKVLVLGDVIGFLSEALEPPETK 1128
Query: 733 AVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGKMLLMGAIFQCLNPALTIAAAL 792
++ NAI LL +GAL+ + LTPLG L +PVDP IGKM+++G+ F+CL+P LTIA+
Sbjct: 1129 SIDNAINLLIDLGALNANQELTPLGLQLSFIPVDPRIGKMIILGSYFRCLDPILTIASFS 1188
Query: 793 AHRNPFVLPVN 803
+NP N
Sbjct: 1189 NQKNPITTLYN 1199
Score = 391 (142.7 bits), Expect = 7.8e-108, Sum P(3) = 7.8e-108
Identities = 84/247 (34%), Positives = 136/247 (55%)
Query: 233 KLSVKVANTISPPQS--D--SAKERLNVILKER--QEKLKSSDSGKAMLSFREKLPAFKM 286
+L+ K+ NT +P Q+ D S +E ++ ++ R + + + K + R +LP FK
Sbjct: 664 QLNKKI-NTYTPQQTLLDVKSFEELSDIGIERRAYEHNKRQTAEYKRIYQKRTELPIFKQ 722
Query: 287 KAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQPXXXXXXXX 346
++ ++++ NQ++++ G+TGCGKTTQ+PQF++E+ + S CNI+ TQP
Sbjct: 723 RSHLIESIKNNQIIIIMGDTGCGKTTQIPQFVIEDMIDSGHAPYCNIVMTQPRRISVLGA 782
Query: 347 XXXXXXERGENLGETVGYQIRLESKRSAQT-RLLFCTTGVLLRQLVEDPDLSCVSHLLVD 405
ER E +G+TVGYQIR ++ + T +LL CT G+LL+++ D L VSHL +D
Sbjct: 783 AERMAYERLEKVGDTVGYQIRFDNVQPLGTSKLLVCTPGILLKRMYSDMKLHNVSHLFID 842
Query: 406 EIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGNAPTVHIPGLTFPVT 465
E+HER ++ DF MSAT++ L S YFG P + +
Sbjct: 843 EVHERDIHTDFLLIILKKLLADNNNLRVILMSATMDNSLVSAYFGTCPVIKLTSYHHIAQ 902
Query: 466 DLFLEDV 472
+ FLED+
Sbjct: 903 EYFLEDI 909
Score = 218 (81.8 bits), Expect = 7.8e-108, Sum P(3) = 7.8e-108
Identities = 62/212 (29%), Positives = 109/212 (51%)
Query: 821 SDHIALLKAFDGYKDAKRNRRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFV---- 876
SDH++ L F+G+ ++ + E +C ++FLS LQ + ++ Q L ++D+G +
Sbjct: 1237 SDHLSFLNIFNGWLQSRMDGTEDQYC-QDFLSIPLLQQILKVKKQLLSTINDLGIINAQL 1295
Query: 877 -DKSKGPSAYNRYSHDLEMVCAILCAGLYPNVVQCKRKGKRAVFYTKEVGQVALHPSSV- 934
D S +N S++L+++ AI+C+GL+PN+ R+ K+ F T LHPSS+
Sbjct: 1296 RDGFVNNSFFNENSNNLDIIRAIICSGLFPNIA---RQRKKREFKTLSENTF-LHPSSIV 1351
Query: 935 -NANQNNFPLP-YMVYSEMVKTNNINVYDSTNISEYALLLFGGNLIPSKTG---EGIEML 989
N Q P ++++ E KT + T I E +LLLFG I ++T + +
Sbjct: 1352 YNLFQELNPKENWVIFEEKFKTKLTFIKTITRIPEISLLLFGSTPIFNQTSTENSTVSIN 1411
Query: 990 GGYLHFSASKTVLELIRKLRGELDKLLNRKIE 1021
G + F L+ +R +++K L + IE
Sbjct: 1412 GTQIKFYIPTLSCHLLLSIREQMEKSLQKYIE 1443
>WB|WBGene00004355 [details] [associations]
symbol:rha-1 species:6239 "Caenorhabditis elegans"
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0000003 "reproduction"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0007281 "germ cell development"
evidence=IMP] [GO:0045814 "negative regulation of gene expression,
epigenetic" evidence=IMP] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 GO:GO:0005524 GO:GO:0005634
GO:GO:0009792 GO:GO:0051301 GO:GO:0007067 GO:GO:0006355
GO:GO:0003677 Gene3D:3.30.160.20 GO:GO:0006351 GO:GO:0007281
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000247063 GeneTree:ENSGT00550000074257 KO:K13184
EMBL:Z50071 PIR:T24664 RefSeq:NP_495890.2 ProteinModelPortal:Q22307
SMR:Q22307 STRING:Q22307 PaxDb:Q22307 EnsemblMetazoa:T07D4.3.1
EnsemblMetazoa:T07D4.3.2 GeneID:174417 KEGG:cel:CELE_T07D4.3
UCSC:T07D4.3 CTD:174417 WormBase:T07D4.3 InParanoid:Q22307
OMA:DDWIRLQ NextBio:883938 GO:GO:0045814 Uniprot:Q22307
Length = 1301
Score = 1064 (379.6 bits), Expect = 1.3e-107, P = 1.3e-107
Identities = 263/807 (32%), Positives = 426/807 (52%)
Query: 237 KVANTISPPQSDSAKERLNVILKERQEKLKSSDSGKAMLSFREKLPAFKMKAEFLKAVAE 296
+ +N P + + E+++ + E+++ K ++ + + R +LP + + ++ VAE
Sbjct: 338 RASNIDEEPLAFMSMEQISQRIMEKED-FKRGEALDKITAQRGELPVAQYRENIVQTVAE 396
Query: 297 NQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQPXXXXXXXXXXXXXXERGE 356
N+V ++ GETGCGK+TQ+ QF+LE L + GA N + +QP ERGE
Sbjct: 397 NRVTLIKGETGCGKSTQVAQFLLESFLENSNGASFNAVVSQPRRISAISLAERVANERGE 456
Query: 357 NLGETVGYQIRLESKRSAQT-RLLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNED 415
+GET GY +R +S ++FCT GVLLR + + L +SH+++DEIHER ++ D
Sbjct: 457 EVGETCGYNVRFDSATPRPYGSIMFCTVGVLLRMM--ENGLRGISHVIIDEIHERDVDTD 514
Query: 416 FXXXXXXXXXXXXXXXXXXXMSATINADLFSKYF------GNAPTVHIPGLTFPVTDLFL 469
F MSATI+ DLF+ +F G P + + G TFPV +L
Sbjct: 515 FVLIVLREMISTYRDLRVVLMSATIDTDLFTNFFSSIPDVGPTPVITMHGRTFPVQSFYL 574
Query: 470 EDVLEKTRYKMNSKLDSFQGNXXXXXXQDSKK--DHLTALFEDVDIDSNYKNYRASTRAS 527
ED+L ++ M + D + D + + + +++I ++ + S + +
Sbjct: 575 EDILHNLQH-MPEEPDQKKRKKGGPPPPDDDEGDEEVDDKGRNMNILTD-PSINESLKTA 632
Query: 528 LEAWSAEQIDLGLVESTIEYICRHEGDGAILVFLTGWNDISKLLDQIKVNKFLGDPNKFL 587
+ S + I G++E+ + I DGA+LVFL GW +I L +++ ++ G NK+
Sbjct: 633 MSRISEKDIPFGVIEAILNDIASRGVDGAVLVFLPGWAEIMTLCNRLLEHQEFGQANKYE 692
Query: 588 VLPLHGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDAL 647
+LPLH + + QR++F+ P KRKI+++TNIAE+SITIDDVVYV+D KAKE Y +
Sbjct: 693 ILPLHSQLTSQEQRKVFNHYP-GKRKIIVSTNIAETSITIDDVVYVIDSCKAKERMYTSN 751
Query: 648 NKLACLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQLPEILRTPLQELC 707
N + W SK + QRRGRAGRV+ G + L ++ +A+ + E+LR PL ++
Sbjct: 752 NNMVHFATVWASKTNVIQRRGRAGRVRAGYAFHLCSKMRFEALDDHGTAEMLRIPLHQIA 811
Query: 708 LHIKSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDP 767
L IK L+LG+VG FL KALQPP V + +L+ +GALD LT LG+ L +P++P
Sbjct: 812 LTIKLLRLGSVGEFLGKALQPPPYDMVVESEAVLQAMGALDRNLELTSLGKMLARMPIEP 871
Query: 768 NIGKMLLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALL 827
I K+L++G + +A+A++ PFV + +R FAG+ SDH+A++
Sbjct: 872 VIAKVLILGTALGAGSVMCDVASAMSFPTPFVPREKHHSRLSGTQRKFAGNKFSDHVAIV 931
Query: 828 KAFDGYKDAKR---NRRERDFCWENFLSPITLQMMEDMRSQFLDLL-SDIGFVDKSKGPS 883
GY++A + + ER+FC LS L+M + R Q +D+L + F +
Sbjct: 932 SVIQGYREAVQMGASAAEREFCERYSLSNPVLKMTDGARRQLIDVLRNQCSFPEDILFDI 991
Query: 884 AYNRYSHD--LEMVCAILCAGLYPNVVQCKRKGKRAVFYTKEVGQVALHPSSVNANQNN- 940
+ N D L ++ ++L LYPNV GKR V T E ++ S+ NN
Sbjct: 992 SVNVNGPDRELNLMRSLLVMALYPNVAYYV--GKRKVL-TIEQSSALINKYSMLVPMNNR 1048
Query: 941 ----FPLPYMVYSEMVKTNNINVYDSTNISEYALLLFGGNLIPSKTGEGIEMLGGYLHFS 996
FP P +V++E V+T I+ + IS LL+FG + GEG+ + +
Sbjct: 1049 QEMDFPSPLLVFTEKVRTRCISCKQMSVISAIQLLVFGSRKVEC-VGEGLVRIDETITIR 1107
Query: 997 ASKTVLELIRKLRGELDKLLNRKIEDP 1023
+ + + LR ++ LL + E+P
Sbjct: 1108 MNVSTAAALIGLRPCIEALLVKSCENP 1134
>UNIPROTKB|G4MZR9 [details] [associations]
symbol:MGG_07059 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp22" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR009060 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00591 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR015940 SMART:SM00165 Gene3D:3.10.110.10
InterPro:IPR016135 SUPFAM:SSF54495 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:CM001232 SUPFAM:SSF46934 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 RefSeq:XP_003715240.1
ProteinModelPortal:G4MZR9 EnsemblFungi:MGG_07059T0 GeneID:2682944
KEGG:mgr:MGG_07059 Uniprot:G4MZR9
Length = 1404
Score = 630 (226.8 bits), Expect = 2.6e-105, Sum P(3) = 2.6e-105
Identities = 158/427 (37%), Positives = 236/427 (55%)
Query: 535 QIDLGLVESTIEYICRH----EGDGAILVFLTGWNDISKLLDQIKVNKFLGDPNKFLVLP 590
+I+ L+ T E I + G IL+FL G +I++ ++ N VLP
Sbjct: 864 RINYNLLVETTEAIDNELSLAQKSGGILIFLPGVAEINRACGMLR------SLNCLHVLP 917
Query: 591 LHGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKL 650
LH S+ T QR++F PP KRK+V+ATN+AE+SITIDD++ VVD GK KETSYDA N +
Sbjct: 918 LHASLETKEQRKVFVPPPSGKRKVVVATNVAETSITIDDIIVVVDTGKVKETSYDAANNM 977
Query: 651 ACLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQLPEILRTPLQELCLHI 710
L ++ S A+ QRRGRAGRVQ G CYKLY R + M PE+ R PL++LCL +
Sbjct: 978 RRLEETFASLAACKQRRGRAGRVQAGECYKLYTRKLESQMAERPEPEMRRVPLEQLCLSV 1037
Query: 711 KSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIG 770
+++ + V FL++A PP+ AV+ AI +L+ +G LD E LT LGR L +P D G
Sbjct: 1038 RAMGIADVRGFLARAPTPPEAAAVEGAITMLRRMGCLDG-EELTALGRQLAAIPADLRCG 1096
Query: 771 KMLLMGAIFQCLNPALTIAAALAH-RNPFVLPVNMQKEVDEAKRSFA---GDSCSDHIAL 826
K+++ GA+F CL +++AA L+ R FV P + + + EA+ FA GD +D +
Sbjct: 1097 KLMVYGAVFGCLEDCVSVAALLSSGRGVFVSPPDKRDQAREARARFAAGDGDLLTD-LRA 1155
Query: 827 LKAFDGY-KDAK-RNRRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFV---D---K 878
+A+D +D + R R FC +NFLS +TL + R+Q+ L ++G V D
Sbjct: 1156 FQAWDAMMRDPSVQQRHVRSFCDDNFLSYLTLSDVASARTQYFTSLVELGLVRPGDAGYS 1215
Query: 879 SKGP--SAYNRYSHDLEMVCAILCAGLYPNVVQCKRKGKRAVFYTKEVGQVALHPSSVNA 936
++GP S + ++ A+ + P + + + K+ F G V + P +
Sbjct: 1216 NRGPPPSTSEGGASSKYLLRALTASAFAPQIARIQYPDKK--FAASMSGAVEIDPEAKTI 1273
Query: 937 ---NQNN 940
NQ N
Sbjct: 1274 RYYNQEN 1280
Score = 374 (136.7 bits), Expect = 2.6e-105, Sum P(3) = 2.6e-105
Identities = 103/276 (37%), Positives = 148/276 (53%)
Query: 225 SSEV-ARRPKLSVKVANTISPPQSDSAKERLNVILKERQEKLKSSDSGKAMLSFREKLPA 283
S+++ ARR + K N + P S S E L RQE + + ML R+KLPA
Sbjct: 587 STQIRARRKQRRPK--NIVWNPDSASKNEWLR-----RQE----TPEYRKMLGQRQKLPA 635
Query: 284 FKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQPXXXXX 343
+ ++ E ++ VAE+QV +++GETG GK+TQ QFIL++ G NI+ TQP
Sbjct: 636 WLLRDEIVRTVAEHQVTIIAGETGSGKSTQSVQFILDDLYGRGLGHAANILVTQPRRISA 695
Query: 344 XXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQL------VED--PD 395
ER +G+ VGY IR ES+ +TR+ F TTGVLLR+L VED
Sbjct: 696 LGLADRVSDERCSQVGQEVGYIIRGESRTGPKTRITFVTTGVLLRRLQVSGGRVEDVVAS 755
Query: 396 LSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYF---G-N 451
L+ VSH+++DE+HER ++ DF MSAT+++ F+ YF G
Sbjct: 756 LADVSHVVIDEVHERSLDTDFLLSIIRDVLKQRRDLKLVLMSATLDSATFASYFVQDGIR 815
Query: 452 APTVHIPGLTFPVTDLFLEDVLEKTRY-KMNSKLDS 486
V I G TFPVTD +L+DV+ T++ N + D+
Sbjct: 816 VGQVEIAGRTFPVTDYYLDDVIRMTQFGTANIRADA 851
Score = 165 (63.1 bits), Expect = 2.6e-105, Sum P(3) = 2.6e-105
Identities = 39/137 (28%), Positives = 73/137 (53%)
Query: 908 VQCKRKGKRAVFYTKEVGQVALHPSSVNANQNNFP--LPYMVYSEMVKTNNINVYDSTNI 965
V+ + K +Y +E G+V +HPSS + F ++ Y ++ T+ + V D T
Sbjct: 1264 VEIDPEAKTIRYYNQENGRVFVHPSSTLFDSQGFSGNAAFLSYFSIISTSKVFVRDLTPF 1323
Query: 966 SEYALLLFGGNLIPSKTGEGIEMLGGYLHFSASKTVLELIRKLRGELDKLLNRKIEDPRV 1025
+ Y LLLF G + G G+ ++ G+L + L+ +LRG +D ++ K++DP +
Sbjct: 1324 NAYTLLLFAGAIELDTLGRGL-VVDGWLRLRGWARIGVLVSRLRGMVDDVIALKVDDPSL 1382
Query: 1026 DLSVEGKAVVSAVVELL 1042
DL+ ++ AV++L+
Sbjct: 1383 DLA--DNDIIRAVIKLI 1397
Score = 37 (18.1 bits), Expect = 6.3e-70, Sum P(3) = 6.3e-70
Identities = 8/34 (23%), Positives = 17/34 (50%)
Query: 356 ENLGETVGYQIRLESKRSAQTRLLFC--TTGVLL 387
+NLG + Y + +E+ + L + G+L+
Sbjct: 859 QNLGTRINYNLLVETTEAIDNELSLAQKSGGILI 892
>UNIPROTKB|F1RLG0 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR002110 InterPro:IPR001650
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS50088
PROSITE:PS51194 SMART:SM00248 SMART:SM00490 SMART:SM00847
GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676 GO:GO:0004386
InterPro:IPR014001 PROSITE:PS51192 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 OMA:RAFWESS EMBL:CU462841
Ensembl:ENSSSCT00000015529 Uniprot:F1RLG0
Length = 1151
Score = 847 (303.2 bits), Expect = 1.9e-104, Sum P(2) = 1.9e-104
Identities = 190/436 (43%), Positives = 272/436 (62%)
Query: 513 IDSNYKNYRASTRASLEAW----SAEQIDLGLVESTIEYICRHEGD-GAILVFLTGWNDI 567
+ +N + A R L+A+ E++DL L+ + IC H D GA+L+FL G+++I
Sbjct: 297 VQTNGSDLSAEDRELLKAYHHSFDDEKVDLDLIMHLLYNIC-HSCDAGAVLIFLPGYDEI 355
Query: 568 SKLLDQIKVN-KFLGDP--NKFLVLPLHGSMPTINQREIFDRPPPNKRKIVLATNIAESS 624
L D+I + K D +++ V LH +M T +Q+++ PP RKI+L+TNIAE+S
Sbjct: 356 VGLRDRILFDDKRFADNTHSRYQVFMLHSNMQTSDQKKVLKNPPAGVRKIILSTNIAETS 415
Query: 625 ITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPGVCYKLYPR 684
IT++DVV+V+D GK KE S+DALN + L WISKASA QR+GRAGR +PG+C++L+ R
Sbjct: 416 ITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGRAGRCRPGICFRLFSR 475
Query: 685 IIHDAMLPYQLPEILRTPLQELCLHIKSLQLGT--VGSFLSKALQPPDPLAVQNAIELLK 742
+ ML +Q PE+LR PLQELCLH K L + FL KA +PP L V+NA+++LK
Sbjct: 476 LRFQNMLEFQTPELLRMPLQELCLHTKLLAPVNCPIADFLMKAPEPPPALIVRNAVQMLK 535
Query: 743 TIGALDDMENLTPLGRHLCTLPVDPNIGKMLLMGAIFQCLNPALTIAAALAHRNPFVLPV 802
TI A+D E+LT LG HL LPV+P++GKM+L + +CL+P LTIA LA+R+PFVLP
Sbjct: 536 TIDAMDAWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCLDPILTIACTLAYRDPFVLPT 595
Query: 803 NM-QKEVDE-AKRSFAGDSCSDHIALLKAFDGYKDAKRNRRERDFCWENFLSPITLQMME 860
QK ++ F + SDH+ALL+AF ++ A+ + ER FC +NFLS T++++
Sbjct: 596 QASQKRAAMLCRKRFTAGTFSDHMALLRAFQAWQKARSDGWERAFCEKNFLSQATMEIII 655
Query: 861 DMRSQFLDLLSDIGFVDKSKGPSA--YNRYSHDLEMVCAILCAGLYPNVVQCKRKGKRAV 918
MR+Q L L GFV G N S + +V A L AG+YPN+V R+ V
Sbjct: 656 GMRTQLLGQLRASGFVRARGGGDIRDVNTNSENWAVVKAALVAGMYPNLVHVDREN--VV 713
Query: 919 FYTKEVGQVALHPSSV 934
+ +V HP+SV
Sbjct: 714 LTGPKEKKVRFHPTSV 729
Score = 207 (77.9 bits), Expect = 1.9e-104, Sum P(2) = 1.9e-104
Identities = 44/107 (41%), Positives = 60/107 (56%)
Query: 373 SAQTRLLFCTTGVLLRQLVE-DPDLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXX 431
S +T L FCT GVLLR L+ D LS V+H++VDE+HER DF
Sbjct: 3 SPKTLLTFCTNGVLLRTLMAGDSTLSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTL 62
Query: 432 XXXXMSATINADLFSKYFGNAPTVHIPGLTFPVTDLFLEDVLEKTRY 478
SA ++ +LF +YFG+ P ++I G F V ++FLED+L T Y
Sbjct: 63 KLILSSAALDVNLFIRYFGSCPVIYIQGRPFEVKEMFLEDILRTTGY 109
Score = 189 (71.6 bits), Expect = 1.0e-26, Sum P(2) = 1.0e-26
Identities = 57/182 (31%), Positives = 91/182 (50%)
Query: 812 KRSFAGDSCSDHIALLKAFDGYKDAKRNRRERDFCWENFLSPITLQMMEDMRSQFLDLLS 871
++ F + SDH+ALL+AF ++ A+ + ER FC +NFLS T++++ MR+Q L L
Sbjct: 607 RKRFTAGTFSDHMALLRAFQAWQKARSDGWERAFCEKNFLSQATMEIIIGMRTQLLGQLR 666
Query: 872 DIGFVDKSKGPSA--YNRYSHDLEMVCAILCAGLYPNVVQCKRKGKRAVFYTKEVGQVAL 929
GFV G N S + +V A L AG+YPN+V R+ V + +V
Sbjct: 667 ASGFVRARGGGDIRDVNTNSENWAVVKAALVAGMYPNLVHVDREN--VVLTGPKEKKVRF 724
Query: 930 HPSSV--NANQNNFP-----------LP--YMVYSEMVKTNNI-NVYDSTNISEYALLLF 973
HP+SV P LP +++Y EM + + I N+ + ++ +L+F
Sbjct: 725 HPTSVLSQPQYKKIPPANGQAAAIQALPTDWLIYDEMTRAHRIANIRCCSAVTPVTVLVF 784
Query: 974 GG 975
G
Sbjct: 785 CG 786
>UNIPROTKB|H7C109 [details] [associations]
symbol:DHX57 "Putative ATP-dependent RNA helicase DHX57"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
GO:GO:0004386 EMBL:AC018693 InterPro:IPR011709 Pfam:PF07717
HGNC:HGNC:20086 ChiTaRS:DHX57 Ensembl:ENST00000452978
Uniprot:H7C109
Length = 665
Score = 872 (312.0 bits), Expect = 1.2e-100, Sum P(2) = 1.2e-100
Identities = 214/564 (37%), Positives = 337/564 (59%)
Query: 497 QDSKKDHLTALFEDV-DIDSNYKNYRASTRASLEAWSAEQIDLGLVESTIEYIC--RHE- 552
QDS KD + D + + YK S ++ E+++L L+E+ +E+I +H
Sbjct: 110 QDSVKDAVPDQQLDFKQLLARYKGVSKSVIKTMSIMDFEKVNLELIEALLEWIVDGKHSY 169
Query: 553 GDGAILVFLTGWNDISKLLDQIKVNKFLGD--PNKFLVLPLHGSMPTINQREIFDRPPPN 610
GAILVFL G +I L +Q++ N + N+ ++ PLH S+ + Q+ +F +PP
Sbjct: 170 PPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVIHPLHSSLSSEEQQAVFVKPPAG 229
Query: 611 KRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRA 670
KI+++TNIAE+SITIDDVVYV+D GK KE YDA + L +++S+A+A QR+GRA
Sbjct: 230 VTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRA 289
Query: 671 GRVQPGVCYKLYPRIIHD-AMLPYQLPEILRTPLQELCLHIKSLQLGT---VGSFLSKAL 726
GRV GVC+ L+ ++ +L QLPEI R PL++LCL IK L++ + + S S+ +
Sbjct: 290 GRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSAHNLQSVFSRLI 349
Query: 727 QPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGKMLLMGAIFQCLNPAL 786
+PP +++ + L+ +GAL E LTPLG HL +LPVD IGK++L G+IF+CL+PAL
Sbjct: 350 EPPHTDSLRASKIRLRDLGALTPDERLTPLGYHLASLPVDVRIGKLMLFGSIFRCLDPAL 409
Query: 787 TIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAKRN--RRERD 844
TIAA+LA ++PFV P + ++E ++ K FA + SD++ALL+A+ G++ + + R +
Sbjct: 410 TIAASLAFKSPFVSPWDKKEEANQKKLEFAFAN-SDYLALLQAYKGWQLSTKEGVRASYN 468
Query: 845 FCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYSHDLEMVCAILCAGLY 904
+C +NFLS LQ M ++ QF +LLSDIGF + + + + V + G
Sbjct: 469 YCRQNFLSGRVLQEMASLKRQFTELLSDIGFAREGLRAREIEKRAQGGDGV--LDATGEE 526
Query: 905 PNVVQCKRKGKRAVFYTKEVGQVALHPSSVNANQNNFPLPYMVYSEMVKTNNINVYDSTN 964
N K A+ AL+P+ V +F PY++Y E +KT+ + + D +
Sbjct: 527 ANSNAENPKLISAMLCA------ALYPNVVQVR--HFDSPYLLYHEKIKTSRVFIRDCSM 578
Query: 965 ISEYALLLFGGNLI--PSKTGEGIEMLG-GYLHF-SASKTVLELIRKLRGELDKLLNRKI 1020
+S Y L+LFGG + + GE + L G++ F +AS V EL+++LR ELD+LL KI
Sbjct: 579 VSVYPLVLFGGGQVNVQLQRGEFVVSLDDGWIRFVAASHQVAELVKELRCELDQLLQDKI 638
Query: 1021 EDPRVDLSV--EGKAVVSAVVELL 1042
++P +DL G ++S +V+L+
Sbjct: 639 KNPSIDLCTCPRGSRIISTIVKLV 662
Score = 146 (56.5 bits), Expect = 1.2e-100, Sum P(2) = 1.2e-100
Identities = 35/102 (34%), Positives = 52/102 (50%)
Query: 436 MSATINADLFSKYFGNAPTVHIPGLTFPVTDLFLEDVLEKTRYKMNSKLDSFQGNXXXXX 495
MSAT+NA+LFS YF + P + IPG TFPV FLED + TRY + +
Sbjct: 23 MSATLNAELFSDYFNSCPVITIPGRTFPVDQFFLEDAIAVTRYVLQDGSPYMRSMKQISK 82
Query: 496 XQDSKKDHLTALFEDVDIDSNYKNYRASTRASLEAWSAEQID 537
+ + + TA FE+V+ D + + +A +Q+D
Sbjct: 83 EKLKARRNRTA-FEEVEEDLRLSLHLQDQDSVKDAVPDQQLD 123
>ASPGD|ASPL0000008624 [details] [associations]
symbol:AN5839 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005829 "cytosol"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:BN001301 EMBL:AACD01000100
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
GO:GO:0008026 OrthoDB:EOG4TXG12 RefSeq:XP_663443.1
EnsemblFungi:CADANIAT00007203 GeneID:2870747 KEGG:ani:AN5839.2
HOGENOM:HOG000213693 OMA:KNIRRAI Uniprot:Q5B0U1
Length = 1436
Score = 985 (351.8 bits), Expect = 9.3e-99, P = 9.3e-99
Identities = 277/862 (32%), Positives = 440/862 (51%)
Query: 122 WGKLEQMKRGEEQEMIIKRKFSRADQQTLADMAHQLGLHFHAYNKGKALAV-----SK-- 174
W K ++M E + ++ S A ++ +A AY AL + SK
Sbjct: 479 WSKPQEMPSPFSHEAVTQKSTSYATFVSMDKIATPTSQQAEAYASTFALFILFPQNSKEG 538
Query: 175 ---VPLPMYRPDLDERHGSTEKELQMSIETERRVGNLLNSSQGNVPVNDSGIESSEVARR 231
+ LP DL E + +K +Q ++ V +L Q N + + S+ R+
Sbjct: 539 KAYMRLPAAWRDLWEEFANAKK-VQDDEADKQVVKSLRKLIQENHGTFEDDVVLSDNFRK 597
Query: 232 PKLSVKVANTISPPQSDSAKER--LNVILKERQEKLKSSDSGKAMLSFREKLPAFKMKAE 289
+ + N SP ++ AKE +N L + + S+ + + M+ R +LP + K E
Sbjct: 598 RNGTPR--NR-SPVRA-GAKEAPGINEQLSQIWMEKASTPAFQYMVQSRMQLPIWTFKNE 653
Query: 290 FLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQPXXXXXXXXXXX 349
L + ++ L++ ETG GK+TQ+P FILE E+ L G C I T+P
Sbjct: 654 ILNTLNSHRALIICSETGSGKSTQIPSFILEHEM--LSGRPCKIYVTEPRRISAISLARR 711
Query: 350 XXXERGENLGET------VGYQIRLESKRSAQTRLLFCTTGVLLRQLVEDPDLSCVSHLL 403
E GE+ + +G+ +RLESK S TRL+F TTGV++R L D ++H++
Sbjct: 712 VSEELGESKNDVGTSRSLIGFAVRLESKVSPATRLVFATTGVVVRMLERPDDFQDITHVV 771
Query: 404 VDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGNAPTVHIPGLTFP 463
+DE+HER ++ DF MSAT++A+ FS Y G P ++IPG TFP
Sbjct: 772 LDEVHERSIDSDFLLIVLRRLMQKRQDLKLILMSATVDANRFSTYLGGVPVLNIPGRTFP 831
Query: 464 VTDLFLEDVLEKTRYKMNSKLDSFQGNXXXXXXQDSKKDHLTALFEDVDIDSNYKNYRAS 523
V FLED +E T+Y+ + N +D D T+ E + + +NY
Sbjct: 832 VETKFLEDAIELTQYRTTEN----ESNVADDEYED---DAETSQGETTGVAATLENYSKQ 884
Query: 524 TRASLEAWSAEQIDLGLVESTIEYICRHEG----DGAILVFLTGWNDISKLLDQIKVNKF 579
TR ++ + ++D L++ + + AILVFL G +I +L D++
Sbjct: 885 TRETIMNFDEYRLDYQLIKKLLMKLATAPEMEYYSKAILVFLPGMAEIRRLNDEL----- 939
Query: 580 LGDP---NKFLVLPLHGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDC 636
L +P + +++ LH S+ + Q + F PP RKIV+ATNIAE+ ITI D+ V+D
Sbjct: 940 LSEPTFQHGWIIHALHSSIASDEQEKAFVVPPDGMRKIVIATNIAETGITIPDITAVIDA 999
Query: 637 GKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLP-YQL 695
GK K +D +L+ L+ ++IS+A+A QRRGRAGRVQ G+C+ ++ + HD +L Q
Sbjct: 1000 GKEKTMRFDERRQLSRLVEAFISRANAKQRRGRAGRVQRGICFHMFTKHRHDNLLAEQQT 1059
Query: 696 PEILRTPLQELCLHIKSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTP 755
PE+LR LQ+L L +K +LG V L +AL PP ++ AI+ LK + AL ENLTP
Sbjct: 1060 PEMLRLSLQDLVLRVKICKLGEVEPTLLEALDPPSSKNIRRAIDALKEVKALTSTENLTP 1119
Query: 756 LGRHLCTLPVDPNIGKMLLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSF 815
LG+ L LP+D +GK+++ GA F+CL+ A++IAA L+ ++PFV + + + + F
Sbjct: 1120 LGQQLAKLPLDVFLGKLIIHGAFFKCLDAAISIAAILSCKSPFVNTMGSNAQKEAVRLGF 1179
Query: 816 A-GDSCSDHIALLKAFDGYKDAKRN--RRERDFCWENFLSPITLQMMEDMRSQFLDLLSD 872
GDS D + + A+ +K + E FC +NFLSP TL +ED++ Q + ++D
Sbjct: 1180 RRGDS--DLLTVYNAYCAWKRTRSTPGANEYAFCRKNFLSPQTLLNIEDVKLQLMVSIAD 1237
Query: 873 IGFV--DKS------KGPSAYNRY------SHDLE-----MVCAILCAGLYPNVVQCKRK 913
G V D + + S R+ SHD ++ +++ YP ++ + K
Sbjct: 1238 AGLVTLDTNQKASLNRARSTRQRHFFTTPPSHDTNNANDTLIQSVIAWSFYPKLLTREGK 1297
Query: 914 GKRAVFYTKEVGQVALHPSSVN 935
G R + + V LHP+SVN
Sbjct: 1298 GWRNIANNQSV---TLHPTSVN 1316
>POMBASE|SPBC15C4.05 [details] [associations]
symbol:SPBC15C4.05 "ATP-dependent RNA/DNA helicase
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
PomBase:SPBC15C4.05 GO:GO:0005829 GO:GO:0005524 EMBL:CU329671
GO:GO:0003676 GO:GO:0004003 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 PIR:T39475 RefSeq:NP_595925.1
ProteinModelPortal:O60114 EnsemblFungi:SPBC15C4.05.1 GeneID:2539831
KEGG:spo:SPBC15C4.05 OrthoDB:EOG4TXG12 NextBio:20800979
Uniprot:O60114
Length = 1428
Score = 910 (325.4 bits), Expect = 1.4e-98, Sum P(2) = 1.4e-98
Identities = 244/708 (34%), Positives = 375/708 (52%)
Query: 193 KELQMSIETERRVGNLLNSSQGNVPVNDSGIESSEVARRPKLSVKVANTISPPQSD---S 249
KE+ E++ +L ++ + + DS I+S E+ P S + ++P + S
Sbjct: 543 KEVYGKFSAEKQNTDLAEDAKISEKL-DSIIKSKEL-ETPT-SATTSKLMAPMDNIGKFS 599
Query: 250 AKERL-NVILKERQEKLKSSDSGKAMLSFREKLPAFKMKAEFLKAVAENQVLVVSGETGC 308
ER +L + +++L+S + K + FR +LPA + + AV +Q+L++SG+TGC
Sbjct: 600 GFERPPETLLNKWRQQLESESAEKFKV-FRNQLPATMFRETIIDAVNNSQLLIISGDTGC 658
Query: 309 GKTTQLPQFILEEELSSLRGADCNIICTQPXXXXXXXXXXXXXXERGEN-----LGETVG 363
GK+TQ+P F+LE S+ G I T+P E G N E VG
Sbjct: 659 GKSTQIPAFLLEN--STKNGKAVKIYVTEPRRISAISLANRVSQELGGNPPSARSHELVG 716
Query: 364 YQIRLESKRSAQTRLLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFXXXXXXX 423
Y +RL+SK + T L + TTG LR L ++ V+HL++DE+HER ++ D
Sbjct: 717 YSVRLDSKCTPLTPLTYVTTGTFLRLLEVGNEIESVTHLIIDEVHERSIDSDLLLIHVLH 776
Query: 424 XXXXXXXXXXXXMSATINADLFSKYFGNAPTVHIPGLTFPVTDLFLEDVLEKTRYKMNSK 483
MSAT+NA+ F YF + + IPG T+PV +LED+L + N K
Sbjct: 777 LLKQHPHLKIIIMSATLNAEKFQLYFEGSNLITIPGKTYPVHRFYLEDILSQFG---NDK 833
Query: 484 LDSFQGNXXXXXXQDS-KKDHLTALFEDVDIDSNYKNYRASTRASL-EAWSAEQ-IDLGL 540
SF GN QD ++D +D I SN A +L AW E+ I+ GL
Sbjct: 834 --SF-GNAAG---QDVIEEDDYETDQQDASI-SNKSAEDAIVEMNLIPAWYNEKAINYGL 886
Query: 541 VESTIEYICRHEGDG----AILVFLTGWNDISKLLDQIKVNKFLGDPNKFLVLPLHGSMP 596
+ ++YI EGD +LVFL G ++I ++ I+ + KF + LH ++
Sbjct: 887 IVYLLKYIFT-EGDPKFSKCVLVFLPGISEILRVKSLIEDMPMFRNHRKFCIYMLHSTLS 945
Query: 597 TINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPS 656
+ Q+ +F+ PP RKIVL+TNIAE+ +TI DV V+D G +E Y++ L+ L +
Sbjct: 946 SAQQQSVFNIPPKGCRKIVLSTNIAETGVTIPDVTCVIDTGVHREMRYNSRRHLSRLTDT 1005
Query: 657 WISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAM-LPYQLPEILRTPLQELCLHIKSLQL 715
++SKA+A QR GRAGRVQ G+CY L+ + HD L YQ PEILR LQE+ L +K Q+
Sbjct: 1006 FVSKANAKQRSGRAGRVQEGICYHLFSKFKHDTQFLSYQTPEILRLNLQEVVLRVKMCQM 1065
Query: 716 GTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGKMLLM 775
G V L KAL PP + A+E L +GAL + E LT LG+ L LPVD N+GK+L++
Sbjct: 1066 GDVQDVLGKALDPPSSTNIIRALEKLHQVGALSENEKLTKLGKFLSQLPVDANLGKILVL 1125
Query: 776 GAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSC-SDHIALLKAFDGYK 834
G ++C++ A +I A L +PF V+ + ++A+ SFA ++ SD + + A+ ++
Sbjct: 1126 GCFYKCVDAASSIVAMLTIGSPFRKSVDNEFSANKARLSFAKENTRSDLVLMYYAYCAWR 1185
Query: 835 D---AKRNRRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKS 879
+ + E F E +L+ L M E ++ Q L L D+ + S
Sbjct: 1186 EICLSPLGPDEDSFAKEKYLNLEALSMTESLKIQLLSELKDMKLLGAS 1233
Score = 103 (41.3 bits), Expect = 1.4e-98, Sum P(2) = 1.4e-98
Identities = 38/170 (22%), Positives = 80/170 (47%)
Query: 882 PSAYNRYSHDLEMVCAILCAGLYPNVVQCK-RKGKRAVFYTKEVGQVALHPSSVNANQN- 939
P ++ S + E++C ++ A LYPN+++ K + + T + +V + SVN
Sbjct: 1253 PKEHDINSGNAEILCGVIAASLYPNILRYDYEKRQWSTLSTNK--RVRILDVSVNNRSEL 1310
Query: 940 -NFPLPYMVYSEMVKTNNINVY--DSTNISEYALLLFGGNLIPSKTGEGIEMLGGYLHFS 996
N P ++ Y+ M+ + + Y ++T ++ LL+ G + ++ G L + +
Sbjct: 1311 PNMPSKFVAYTNMMSSTRASEYVNETTMVTLRQLLMMCGLKVENRVSVGQAKLDNFTVYF 1370
Query: 997 ASKTVLELIRKLRGELDKLLNRKIEDP--RVDLSVEGKAVVSAVVELLHG 1044
+ V + LR ++ LN +P R+ L+ + +V+ V L +G
Sbjct: 1371 ENVYVSASLSILRRFIETSLNEFFAEPDKRL-LNSHLEVIVNIVSRLNYG 1419
>CGD|CAL0005664 [details] [associations]
symbol:orf19.6818 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50908 PROSITE:PS51194
SMART:SM00490 SMART:SM00591 SMART:SM00847 CGD:CAL0005664
GO:GO:0005524 GO:GO:0003676 Gene3D:3.10.110.10 InterPro:IPR016135
SUPFAM:SSF54495 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
EMBL:AACQ01000029 EMBL:AACQ01000028 RefSeq:XP_719795.1
RefSeq:XP_719912.1 ProteinModelPortal:Q5ADM3 GeneID:3638543
GeneID:3638643 KEGG:cal:CaO19.14110 KEGG:cal:CaO19.6818
Uniprot:Q5ADM3
Length = 1370
Score = 631 (227.2 bits), Expect = 8.1e-98, Sum P(4) = 8.1e-98
Identities = 140/380 (36%), Positives = 214/380 (56%)
Query: 554 DGAILVFLTGWNDISKLLDQIKVNKFLGDPNKFLVLPLHGSMPTINQREIFDRPPPNKRK 613
DG+IL+FL G +IS + +I NK NKF+ LPLH + + Q+ IF P KRK
Sbjct: 820 DGSILIFLPGVLEISSTIKEI--NK--SSDNKFMALPLHSGLTSAEQKSIFKTAPKGKRK 875
Query: 614 IVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRV 673
+V++TNIAE+SITI D V V+D GK+K +D L+ SW S+A QRRGRAGRV
Sbjct: 876 VVVSTNIAETSITIPDCVAVIDTGKSKNLFFDHKLNTTKLIESWCSQAEVRQRRGRAGRV 935
Query: 674 QPGVCYKLYPRIIHDAMLPYQLPEILRTPLQELCLHIKSLQLGTVGSFLSKALQPPDPLA 733
G CY LY + +AM +PEI RT L+ L L +KS+ + V FLS L PD +
Sbjct: 936 TAGTCYHLYTKETFEAMQKQPIPEIKRTRLENLYLVVKSMGISNVNEFLSSGLDAPDKSS 995
Query: 734 VQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGKMLLMGAIFQCLNPALTIAAALA 793
+ A + L IGAL + +LT LG ++ LP DP K+L++G IF CL+ LT+AA +
Sbjct: 996 LDKANQFLHEIGALQE-NSLTKLGNYISYLPTDPQSAKLLILGCIFGCLDICLTLAAISS 1054
Query: 794 HRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAKRNRRERDFCWENFLSP 853
+PF+ + ++ + ++ F G+ D I++ A++ Y K R F EN+LS
Sbjct: 1055 TGSPFINSYEQRDKLKQIQKKF-GNGQGDFISMANAYNAYMSNKSKR----FLTENYLSY 1109
Query: 854 ITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYSHDLEMVCAILCAGLYPNVVQCKRK 913
T++ + RSQ+L LL ++GFV++ S N+ + + ++ I+ YP V + +
Sbjct: 1110 TTIKDITSTRSQYLSLLVELGFVNRKLDDSC-NKNAENWPLIRGIIAGAFYPQVARIQYP 1168
Query: 914 GKRAVFYTKEVGQVALHPSS 933
+ ++ G + + P +
Sbjct: 1169 DPK--YFKSSSGSIEIDPDA 1186
Score = 379 (138.5 bits), Expect = 8.1e-98, Sum P(4) = 8.1e-98
Identities = 86/235 (36%), Positives = 124/235 (52%)
Query: 257 ILKERQEKLKSSDSGKAMLSFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQ 316
++KE +K K SD K ML R KLPAF + + A+ QV +++GETG GK+TQ+ Q
Sbjct: 549 LVKESYKKRKHSDEFKEMLIQRSKLPAFAKQESLMTAINSGQVTLITGETGSGKSTQVVQ 608
Query: 317 FILEEELSSLRGADCNIICTQPXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQT 376
FI+++ L S IICTQP ER + +G GY IR E+K S+ T
Sbjct: 609 FIMDD-LYSKGDFTTKIICTQPRRLSAVSLADRISKERVDEVGSETGYIIRGENKTSSNT 667
Query: 377 RLLFCTTGVLLRQLVEDPD---LSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXX 433
R+ F TTGVLLR L L + ++L+DE+HER ++ DF
Sbjct: 668 RITFATTGVLLRMLQSSKKNGVLKNIGYILIDEVHERSVDADFLLILLKKMIKSMPKLKI 727
Query: 434 XXMSATINADLFSKYFGNAPT-VHIPGLTFPVTDLFLEDVLEKTRYKMNSKLDSF 487
+SATI+ D F +F T +HI G T+P+ D +L+ +L ++ YK + F
Sbjct: 728 ILLSATISVDTFINFFEKPLTPLHIEGRTYPIQDFYLDSILAESEYKFQNSDGEF 782
Score = 82 (33.9 bits), Expect = 8.1e-98, Sum P(4) = 8.1e-98
Identities = 27/103 (26%), Positives = 47/103 (45%)
Query: 945 YMVYSEMVKTNNINVYDSTNISEYALLLFGG------NLIPSKTGEGIEMLGGYLHFSAS 998
++ Y T + V D T S +A LLFGG N+ +T GI ++ +L
Sbjct: 1269 FVAYRSSHHTTKLYVRDLTPTSTFATLLFGGDFSYDLNITLGQTSPGI-VIDNWLPIRTW 1327
Query: 999 KTVLELIRKLRGELDKLLNRKIEDPRVDLSVEGKAVVSAVVEL 1041
LI+ LR +D +++ K+ +P L + V+ ++ L
Sbjct: 1328 CKNGVLIKHLRRLIDSVIDEKLSNPESPLDEDIFKVIERIINL 1370
Score = 47 (21.6 bits), Expect = 3.8e-63, Sum P(4) = 3.8e-63
Identities = 11/41 (26%), Positives = 20/41 (48%)
Query: 533 AEQIDLGLVESTIEYICRHEGDGAILVFLTGWND-ISKLLD 572
A I L +V ++Y+ H G I ND ++K+++
Sbjct: 469 ANYIKLAIVRELLKYLTDHIGQCMIYTIFEWLNDHVNKIIE 509
Score = 45 (20.9 bits), Expect = 8.1e-98, Sum P(4) = 8.1e-98
Identities = 9/15 (60%), Positives = 11/15 (73%)
Query: 926 QVALHPSSVNANQNN 940
+V +HPSSV N NN
Sbjct: 1203 RVFIHPSSVLFNDNN 1217
>UNIPROTKB|Q5ADM3 [details] [associations]
symbol:CaO19.14110 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50908 PROSITE:PS51194
SMART:SM00490 SMART:SM00591 SMART:SM00847 CGD:CAL0005664
GO:GO:0005524 GO:GO:0003676 Gene3D:3.10.110.10 InterPro:IPR016135
SUPFAM:SSF54495 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
EMBL:AACQ01000029 EMBL:AACQ01000028 RefSeq:XP_719795.1
RefSeq:XP_719912.1 ProteinModelPortal:Q5ADM3 GeneID:3638543
GeneID:3638643 KEGG:cal:CaO19.14110 KEGG:cal:CaO19.6818
Uniprot:Q5ADM3
Length = 1370
Score = 631 (227.2 bits), Expect = 8.1e-98, Sum P(4) = 8.1e-98
Identities = 140/380 (36%), Positives = 214/380 (56%)
Query: 554 DGAILVFLTGWNDISKLLDQIKVNKFLGDPNKFLVLPLHGSMPTINQREIFDRPPPNKRK 613
DG+IL+FL G +IS + +I NK NKF+ LPLH + + Q+ IF P KRK
Sbjct: 820 DGSILIFLPGVLEISSTIKEI--NK--SSDNKFMALPLHSGLTSAEQKSIFKTAPKGKRK 875
Query: 614 IVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRV 673
+V++TNIAE+SITI D V V+D GK+K +D L+ SW S+A QRRGRAGRV
Sbjct: 876 VVVSTNIAETSITIPDCVAVIDTGKSKNLFFDHKLNTTKLIESWCSQAEVRQRRGRAGRV 935
Query: 674 QPGVCYKLYPRIIHDAMLPYQLPEILRTPLQELCLHIKSLQLGTVGSFLSKALQPPDPLA 733
G CY LY + +AM +PEI RT L+ L L +KS+ + V FLS L PD +
Sbjct: 936 TAGTCYHLYTKETFEAMQKQPIPEIKRTRLENLYLVVKSMGISNVNEFLSSGLDAPDKSS 995
Query: 734 VQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGKMLLMGAIFQCLNPALTIAAALA 793
+ A + L IGAL + +LT LG ++ LP DP K+L++G IF CL+ LT+AA +
Sbjct: 996 LDKANQFLHEIGALQE-NSLTKLGNYISYLPTDPQSAKLLILGCIFGCLDICLTLAAISS 1054
Query: 794 HRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAKRNRRERDFCWENFLSP 853
+PF+ + ++ + ++ F G+ D I++ A++ Y K R F EN+LS
Sbjct: 1055 TGSPFINSYEQRDKLKQIQKKF-GNGQGDFISMANAYNAYMSNKSKR----FLTENYLSY 1109
Query: 854 ITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYSHDLEMVCAILCAGLYPNVVQCKRK 913
T++ + RSQ+L LL ++GFV++ S N+ + + ++ I+ YP V + +
Sbjct: 1110 TTIKDITSTRSQYLSLLVELGFVNRKLDDSC-NKNAENWPLIRGIIAGAFYPQVARIQYP 1168
Query: 914 GKRAVFYTKEVGQVALHPSS 933
+ ++ G + + P +
Sbjct: 1169 DPK--YFKSSSGSIEIDPDA 1186
Score = 379 (138.5 bits), Expect = 8.1e-98, Sum P(4) = 8.1e-98
Identities = 86/235 (36%), Positives = 124/235 (52%)
Query: 257 ILKERQEKLKSSDSGKAMLSFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQ 316
++KE +K K SD K ML R KLPAF + + A+ QV +++GETG GK+TQ+ Q
Sbjct: 549 LVKESYKKRKHSDEFKEMLIQRSKLPAFAKQESLMTAINSGQVTLITGETGSGKSTQVVQ 608
Query: 317 FILEEELSSLRGADCNIICTQPXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQT 376
FI+++ L S IICTQP ER + +G GY IR E+K S+ T
Sbjct: 609 FIMDD-LYSKGDFTTKIICTQPRRLSAVSLADRISKERVDEVGSETGYIIRGENKTSSNT 667
Query: 377 RLLFCTTGVLLRQLVEDPD---LSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXX 433
R+ F TTGVLLR L L + ++L+DE+HER ++ DF
Sbjct: 668 RITFATTGVLLRMLQSSKKNGVLKNIGYILIDEVHERSVDADFLLILLKKMIKSMPKLKI 727
Query: 434 XXMSATINADLFSKYFGNAPT-VHIPGLTFPVTDLFLEDVLEKTRYKMNSKLDSF 487
+SATI+ D F +F T +HI G T+P+ D +L+ +L ++ YK + F
Sbjct: 728 ILLSATISVDTFINFFEKPLTPLHIEGRTYPIQDFYLDSILAESEYKFQNSDGEF 782
Score = 82 (33.9 bits), Expect = 8.1e-98, Sum P(4) = 8.1e-98
Identities = 27/103 (26%), Positives = 47/103 (45%)
Query: 945 YMVYSEMVKTNNINVYDSTNISEYALLLFGG------NLIPSKTGEGIEMLGGYLHFSAS 998
++ Y T + V D T S +A LLFGG N+ +T GI ++ +L
Sbjct: 1269 FVAYRSSHHTTKLYVRDLTPTSTFATLLFGGDFSYDLNITLGQTSPGI-VIDNWLPIRTW 1327
Query: 999 KTVLELIRKLRGELDKLLNRKIEDPRVDLSVEGKAVVSAVVEL 1041
LI+ LR +D +++ K+ +P L + V+ ++ L
Sbjct: 1328 CKNGVLIKHLRRLIDSVIDEKLSNPESPLDEDIFKVIERIINL 1370
Score = 47 (21.6 bits), Expect = 3.8e-63, Sum P(4) = 3.8e-63
Identities = 11/41 (26%), Positives = 20/41 (48%)
Query: 533 AEQIDLGLVESTIEYICRHEGDGAILVFLTGWND-ISKLLD 572
A I L +V ++Y+ H G I ND ++K+++
Sbjct: 469 ANYIKLAIVRELLKYLTDHIGQCMIYTIFEWLNDHVNKIIE 509
Score = 45 (20.9 bits), Expect = 8.1e-98, Sum P(4) = 8.1e-98
Identities = 9/15 (60%), Positives = 11/15 (73%)
Query: 926 QVALHPSSVNANQNN 940
+V +HPSSV N NN
Sbjct: 1203 RVFIHPSSVLFNDNN 1217
>UNIPROTKB|E1BJ90 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 InterPro:IPR015880
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00355 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:DSDQVFH GeneTree:ENSGT00700000104421
EMBL:DAAA02047415 IPI:IPI00713665 UniGene:Bt.42016
Ensembl:ENSBTAT00000008999 NextBio:20867826 Uniprot:E1BJ90
Length = 1146
Score = 631 (227.2 bits), Expect = 1.0e-94, Sum P(4) = 1.0e-94
Identities = 140/340 (41%), Positives = 196/340 (57%)
Query: 552 EGDGAILVFLTGWNDISKLLDQIKVNKFLGDPNKFLVLPLHGSMPTINQREIFDRPPPNK 611
E G +LVFL+G +IS +L+ + + +++VLPLH ++ +Q ++FD PP
Sbjct: 376 EERGDLLVFLSGMAEISAVLEPAQA--YASHTQRWVVLPLHSALSVADQDKVFDVAPPGV 433
Query: 612 RKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAG 671
RK +L+TNIAE+S+TID + +VVD GK KE SYD KL L WIS+ASA QR+GRAG
Sbjct: 434 RKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAG 493
Query: 672 RVQPGVCYKLYPRIIHDAMLPYQLPEILRTPLQELCLHIKSLQLGTVGSFLSKALQPPDP 731
R PGVC++LY +DA PY +PEI R L L L +KS+ +G +F ++PP P
Sbjct: 494 RTGPGVCFRLYAESDYDAFAPYPVPEIRRVALDALVLQMKSMSVGDPRTF--PFIEPPPP 551
Query: 732 LAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGKMLLMGAIFQCLNPALTIAAA 791
+++ AI L+ GALD E LTP+G L LPVD IGKML++G++F P LTIAAA
Sbjct: 552 TSLETAILYLRDQGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFHLAEPVLTIAAA 611
Query: 792 LAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAK--RNRRERDFCWEN 849
L+ + PF E +R D D LL F+ + K R R R +C
Sbjct: 612 LSVQTPFTRSAQSNPECAATRRPLESDQ-GDPFTLLNVFNTWVQVKSERGRNSRKWCRHR 670
Query: 850 FLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYS 889
+ L M ++R QF +LL D G + ++ P + YS
Sbjct: 671 GIEEHRLYEMANLRRQFKELLEDHGLLAGAQAPQPGDSYS 710
Score = 372 (136.0 bits), Expect = 1.0e-94, Sum P(4) = 1.0e-94
Identities = 85/209 (40%), Positives = 113/209 (54%)
Query: 278 REKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCN-IICT 336
R LP + L+ + E+QV+VV+G+TGCGK+TQ+PQ++L A C+ + CT
Sbjct: 159 RAALPIAQYGHHILQMLKEHQVVVVAGDTGCGKSTQVPQYLL--------AAGCSHVACT 210
Query: 337 QPXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVEDPDL 396
QP E G VGYQIR ES RSA T+++F T G+LLRQ+ +P L
Sbjct: 211 QPRRIACISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLRQMQREPSL 270
Query: 397 SCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGNAPTVH 456
L+VDE+HER ++ DF MSATIN LFS YFGNAP V
Sbjct: 271 PQYQVLIVDEVHERHLHNDFLLGVLQRLLPQRPDLKVVLMSATINISLFSSYFGNAPVVQ 330
Query: 457 IPGLTFPVTDLFLEDVLEKTRYKMNSKLD 485
+PG FP+T ++ E T K + KLD
Sbjct: 331 VPGRLFPITVVYQPQEAEPTTSK-SEKLD 358
Score = 56 (24.8 bits), Expect = 1.0e-94, Sum P(4) = 1.0e-94
Identities = 15/45 (33%), Positives = 21/45 (46%)
Query: 898 ILCAGLYPNVV-----QCKRKGKRAVFYTKEVGQVALHPSSVNAN 937
+L GLYP + RK +F+T+ V LHP+ V N
Sbjct: 803 VLGRGLYPQLAVPDPFNSSRKDSDQIFHTQTKQGVVLHPTCVFTN 847
Score = 39 (18.8 bits), Expect = 1.0e-94, Sum P(4) = 1.0e-94
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 99 PVWRAERLRQQAAEMEVFDQNEWWGKLEQMKR 130
P RA RQ F Q + +G+L +++R
Sbjct: 126 PPERASEFRQALLHYLDFCQKQAFGRLAKLQR 157
>UNIPROTKB|Q14147 [details] [associations]
symbol:DHX34 "Probable ATP-dependent RNA helicase DHX34"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00355
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0008270
GO:GO:0003723 GO:GO:0005622 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:D50924 EMBL:AC008754 EMBL:AK297692
IPI:IPI00382739 RefSeq:NP_055496.2 UniGene:Hs.151706
ProteinModelPortal:Q14147 SMR:Q14147 IntAct:Q14147
PhosphoSite:Q14147 DMDM:311033371 PaxDb:Q14147 PRIDE:Q14147
DNASU:9704 Ensembl:ENST00000328771 GeneID:9704 KEGG:hsa:9704
UCSC:uc010xyn.2 CTD:9704 GeneCards:GC19P047853 HGNC:HGNC:16719
HPA:HPA042159 HPA:HPA043558 neXtProt:NX_Q14147 PharmGKB:PA27221
HOGENOM:HOG000232193 OMA:DSDQVFH OrthoDB:EOG4GB75B PhylomeDB:Q14147
ChiTaRS:DHX34 GenomeRNAi:9704 NextBio:36469 Bgee:Q14147
CleanEx:HS_DHX34 Genevestigator:Q14147 GermOnline:ENSG00000134815
Uniprot:Q14147
Length = 1143
Score = 634 (228.2 bits), Expect = 1.3e-94, Sum P(4) = 1.3e-94
Identities = 143/354 (40%), Positives = 206/354 (58%)
Query: 538 LGLVESTIEYICRHEGDGAILVFLTGWNDISKLLDQIKVNKFLGDPNKFLVLPLHGSMPT 597
L ++ES I++ E G +LVFL+G +IS +L+ + + +++VLPLH ++
Sbjct: 363 LRVLES-IDHKYPPEERGDLLVFLSGMAEISAVLEAAQT--YASHTQRWVVLPLHSALSV 419
Query: 598 INQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSW 657
+Q ++FD PP RK +L+TNIAE+S+TID + +VVD GK KE SYD KL L W
Sbjct: 420 ADQDKVFDVAPPGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFW 479
Query: 658 ISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQLPEILRTPLQELCLHIKSLQLGT 717
IS+ASA QR+GRAGR PGVC++LY +DA PY +PEI R L L L +KS+ +G
Sbjct: 480 ISQASAEQRKGRAGRTGPGVCFRLYAESDYDAFAPYPVPEIRRVALDSLVLQMKSMSVGD 539
Query: 718 VGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGKMLLMGA 777
+F ++PP P +++ AI L+ GALD E LTP+G L LPVD IGKML++G+
Sbjct: 540 PRTF--PFIEPPPPASLETAILYLRDQGALDSSEALTPIGSLLAQLPVDVVIGKMLILGS 597
Query: 778 IFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAK 837
+F + P LTIAAAL+ ++PF E A+R D D L F+ + K
Sbjct: 598 MFSLVEPVLTIAAALSVQSPFTRSAQSSPECAAARRPLESDQ-GDPFTLFNVFNAWVQVK 656
Query: 838 --RNRRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYS 889
R+R R +C + L M ++R QF +LL D G + ++ + YS
Sbjct: 657 SERSRNSRKWCRRRGIEEHRLYEMANLRRQFKELLEDHGLLAGAQAAQVGDSYS 710
Score = 367 (134.2 bits), Expect = 1.3e-94, Sum P(4) = 1.3e-94
Identities = 83/208 (39%), Positives = 111/208 (53%)
Query: 278 REKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQ 337
R LP + L+ + E+QV+VV+G+TGCGK+TQ+PQ++L S ++ CTQ
Sbjct: 159 RAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFS-------HVACTQ 211
Query: 338 PXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVEDPDLS 397
P E G VGYQIR ES RSA T+++F T G+LLRQ+ +P L
Sbjct: 212 PRRIACISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLRQIQREPSLP 271
Query: 398 CVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGNAPTVHI 457
L+VDE+HER ++ DF MSATIN LFS YF NAP V +
Sbjct: 272 QYEVLIVDEVHERHLHNDFLLGVLQRLLPTRPDLKVILMSATINISLFSSYFSNAPVVQV 331
Query: 458 PGLTFPVTDLFLEDVLEKTRYKMNSKLD 485
PG FP+T ++ E T K + KLD
Sbjct: 332 PGRLFPITVVYQPQEAEPTTSK-SEKLD 358
Score = 57 (25.1 bits), Expect = 1.3e-94, Sum P(4) = 1.3e-94
Identities = 19/79 (24%), Positives = 36/79 (45%)
Query: 883 SAYNRYSHDLEMVCAILCAGLYPNVV-----QCKRKGKRAVFYTKEVGQVALHPSSVNAN 937
SA + L ++ +L GLYP + RK +F+T+ LHP+ V A
Sbjct: 788 SAQDLSREQLALLKLVLGRGLYPQLAVPDAFNSSRKDSDQIFHTQAKQGAVLHPTCVFAG 847
Query: 938 QNNFPLPYMVYSEMVKTNN 956
P +++++ ++ +N
Sbjct: 848 S-----PEVLHAQELEASN 861
Score = 38 (18.4 bits), Expect = 1.3e-94, Sum P(4) = 1.3e-94
Identities = 16/59 (27%), Positives = 28/59 (47%)
Query: 99 PVWRAERLRQQAAEMEVFDQNEWWGKLEQMKRGEEQEMIIKRKFSRADQQTLADMAHQL 157
P R R+ F Q + +G+L +++R E + I + +R QTL + HQ+
Sbjct: 126 PAERVAEFRRALLHYLDFGQKQAFGRLAKLQR-ERAALPIAQYGNRI-LQTLKE--HQV 180
>UNIPROTKB|I3LCY3 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043330 "response to exogenous dsRNA" evidence=IEA]
[GO:0009615 "response to virus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0009615
GO:GO:0003725 GO:GO:0004386 GO:GO:0043330
GeneTree:ENSGT00550000074257 EMBL:FP312685
Ensembl:ENSSSCT00000023601 Uniprot:I3LCY3
Length = 987
Score = 921 (329.3 bits), Expect = 2.6e-94, Sum P(2) = 2.6e-94
Identities = 201/481 (41%), Positives = 294/481 (61%)
Query: 561 LTGWNDISKLLDQIKVNKFLGDPNKF-LVLPLHGSMPTINQREIFDRPPPNKRKIVLATN 619
L GW I + V+ F+ + KF ++ H ++ +N ++F R PP RKIV+ATN
Sbjct: 469 LPGWLVILTYM----VSAFVKN-RKFKIIFKYHSNLCYLNILQVFKRTPPGVRKIVIATN 523
Query: 620 IAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPGVCY 679
IAE+SITIDDVVYV+D GK KET +D N ++ + W+SKA+A QR+GRAGRVQPG CY
Sbjct: 524 IAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGHCY 583
Query: 680 KLYPRIIHDAMLPYQLPEILRTPLQELCLHIKSLQLGTVGSFLSKALQPPDPLAVQNAIE 739
LY + + YQLPEILRTPL+ELCL IK L+LG + FLS+ + PP AV +I+
Sbjct: 584 HLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYFLSRLMDPPSNEAVSLSIK 643
Query: 740 LLKTIGALDDMENLTPLGRHLCTLPVDPNIGKMLLMGAIFQCLNPALTIAAALAHRNPFV 799
L + ALD E LTPLG HL LPV+P+IGKM+L GA+F CL+P LTIAA+L+ ++PFV
Sbjct: 644 HLMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFV 703
Query: 800 LPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAKRN--RRERDFCWENFLSPITLQ 857
+P+ +K D ++ A D+ SDH+ ++ AF+G+++A+R R E+D+CWE FLS TLQ
Sbjct: 704 IPLGKEKVADARRKELAKDTKSDHLTVVNAFEGWEEARRRGFRYEKDYCWEYFLSSNTLQ 763
Query: 858 MMEDMRSQFLDLLSDIGFVDKSKGPS--AYNRYSHDLEMVCAILCAGLYPNVVQCKRK-G 914
M+ +M+ QF + L GFV +S+ P N S + +++ A++CAGLYP V + + G
Sbjct: 764 MLHNMKGQFAEHLLGAGFV-RSRNPKDPESNINSDNEKIIKAVICAGLYPKVAKIRLNLG 822
Query: 915 KRAVFYTKEVGQVALHPSSVNANQNNFPLPYMVYSEMVKTNN-----------INVYDST 963
K+ + V + N+ + + + + + N I +YD T
Sbjct: 823 KKRKIFLIHVPKSTDDLIETKQNKYKYLYSFAIMGRLYEKNVVFFGLMLCFGLIYLYDCT 882
Query: 964 NISEYALLLFGGNL-IPSKTGEGIEMLGGYLHFSASKTVLELIRKLRGELDKLLNRKIED 1022
+S Y LL FGG++ I + + + ++ F + + L+++LR ELD LL KIE
Sbjct: 883 EVSPYCLLFFGGDISIQKDSDQETIAVDEWIIFQSPARIAHLVKELRKELDILLQEKIES 942
Query: 1023 P 1023
P
Sbjct: 943 P 943
Score = 37 (18.1 bits), Expect = 2.6e-94, Sum P(2) = 2.6e-94
Identities = 6/8 (75%), Positives = 7/8 (87%)
Query: 175 VPLPMYRP 182
+PLPM RP
Sbjct: 461 IPLPMIRP 468
>UNIPROTKB|E2RTK4 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00355 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 EMBL:AAEX03000836
Ensembl:ENSCAFT00000006692 Uniprot:E2RTK4
Length = 1140
Score = 636 (228.9 bits), Expect = 4.1e-94, Sum P(3) = 4.1e-94
Identities = 146/369 (39%), Positives = 211/369 (57%)
Query: 530 AWSAEQIDLGLVESTIEYICRH---EGDGAILVFLTGWNDISKLLDQIKVNKFLGDPNKF 586
A +E++D G +E I E G +LVFL+G +IS +L+ + + ++
Sbjct: 350 ASKSEKLDPGPFLRVLEAIDNKYPPEERGDLLVFLSGMAEISSVLEAAQT--YASRTQRW 407
Query: 587 LVLPLHGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDA 646
+VLPLH ++ +Q ++FD PP RK +L+TNIAE+S+TID + +VVD GK KE YD
Sbjct: 408 VVLPLHSALSVADQDKVFDVAPPGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMGYDP 467
Query: 647 LNKLACLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQLPEILRTPLQEL 706
KL L WIS+ASA QR+GRAGR PGVC++LY +DA PY +PEI R L L
Sbjct: 468 QAKLHRLQEFWISQASAEQRKGRAGRTGPGVCFRLYAESDYDAFAPYPVPEIRRVALDAL 527
Query: 707 CLHIKSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVD 766
L +KS+ +G +F ++PP P +++ AI L+ GALD E LTP+G L LPVD
Sbjct: 528 VLQMKSMSVGDPRTF--PFIEPPPPASLETAILYLQDQGALDSSEALTPIGSLLAQLPVD 585
Query: 767 PNIGKMLLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIAL 826
IGKML++G++F P LTIAAAL+ ++PF E A+R D D L
Sbjct: 586 VVIGKMLILGSMFHLAEPVLTIAAALSVQSPFTRSAQSNPECAAARRPLESDQ-GDPFTL 644
Query: 827 LKAFDGYKDAK--RNRRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSA 884
F+ + K R+R R +C + L M ++R QF +LL D G + +++ P+
Sbjct: 645 FNVFNAWVQVKSERSRNSRKWCRHRGIEEHRLYEMANLRRQFKELLEDHGLLARAQAPTP 704
Query: 885 YNRYSHDLE 893
+ Y H L+
Sbjct: 705 GDSY-HRLQ 712
Score = 359 (131.4 bits), Expect = 4.1e-94, Sum P(3) = 4.1e-94
Identities = 81/208 (38%), Positives = 110/208 (52%)
Query: 278 REKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQ 337
R LP + L+ + E+QV+VV+G+TGCGK+TQ+PQ++L S ++ CTQ
Sbjct: 158 RAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFS-------HVACTQ 210
Query: 338 PXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVEDPDLS 397
P E G VGYQIR ES R+A T+++F T G+LLRQ+ +P L
Sbjct: 211 PRRIACISLAKRVSFESLSQYGSQVGYQIRFESTRTAATKIVFLTVGLLLRQIQREPSLP 270
Query: 398 CVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGNAPTVHI 457
L+VDE+HER ++ DF MSATIN LFS YFG AP V +
Sbjct: 271 QYQVLIVDEVHERHLHNDFLLGVLRRLLPKRPDLKVILMSATINISLFSSYFGTAPVVQV 330
Query: 458 PGLTFPVTDLFLEDVLEKTRYKMNSKLD 485
PG FP+T ++ E K + KLD
Sbjct: 331 PGRLFPITVVYQPQEAEPVASK-SEKLD 357
Score = 58 (25.5 bits), Expect = 4.1e-94, Sum P(3) = 4.1e-94
Identities = 16/60 (26%), Positives = 27/60 (45%)
Query: 883 SAYNRYSHDLEMVCAILCAGLYPNVV-----QCKRKGKRAVFYTKEVGQVALHPSSVNAN 937
SA + + ++ +L GLYP + RK +F+T+ LHP+ + AN
Sbjct: 781 SAQDLTRDQMALLKLVLGRGLYPQLAVPDPFNSSRKDSDQIFHTQSKQGTVLHPTCIFAN 840
>UNIPROTKB|E2RTK2 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00355 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 OMA:DSDQVFH
GeneTree:ENSGT00700000104421 EMBL:AAEX03000836
Ensembl:ENSCAFT00000006694 Uniprot:E2RTK2
Length = 1177
Score = 636 (228.9 bits), Expect = 6.0e-94, Sum P(3) = 6.0e-94
Identities = 146/369 (39%), Positives = 211/369 (57%)
Query: 530 AWSAEQIDLGLVESTIEYICRH---EGDGAILVFLTGWNDISKLLDQIKVNKFLGDPNKF 586
A +E++D G +E I E G +LVFL+G +IS +L+ + + ++
Sbjct: 355 ASKSEKLDPGPFLRVLEAIDNKYPPEERGDLLVFLSGMAEISSVLEAAQT--YASRTQRW 412
Query: 587 LVLPLHGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDA 646
+VLPLH ++ +Q ++FD PP RK +L+TNIAE+S+TID + +VVD GK KE YD
Sbjct: 413 VVLPLHSALSVADQDKVFDVAPPGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMGYDP 472
Query: 647 LNKLACLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQLPEILRTPLQEL 706
KL L WIS+ASA QR+GRAGR PGVC++LY +DA PY +PEI R L L
Sbjct: 473 QAKLHRLQEFWISQASAEQRKGRAGRTGPGVCFRLYAESDYDAFAPYPVPEIRRVALDAL 532
Query: 707 CLHIKSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVD 766
L +KS+ +G +F ++PP P +++ AI L+ GALD E LTP+G L LPVD
Sbjct: 533 VLQMKSMSVGDPRTF--PFIEPPPPASLETAILYLQDQGALDSSEALTPIGSLLAQLPVD 590
Query: 767 PNIGKMLLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIAL 826
IGKML++G++F P LTIAAAL+ ++PF E A+R D D L
Sbjct: 591 VVIGKMLILGSMFHLAEPVLTIAAALSVQSPFTRSAQSNPECAAARRPLESDQ-GDPFTL 649
Query: 827 LKAFDGYKDAK--RNRRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSA 884
F+ + K R+R R +C + L M ++R QF +LL D G + +++ P+
Sbjct: 650 FNVFNAWVQVKSERSRNSRKWCRHRGIEEHRLYEMANLRRQFKELLEDHGLLARAQAPTP 709
Query: 885 YNRYSHDLE 893
+ Y H L+
Sbjct: 710 GDSY-HRLQ 717
Score = 359 (131.4 bits), Expect = 6.0e-94, Sum P(3) = 6.0e-94
Identities = 81/208 (38%), Positives = 110/208 (52%)
Query: 278 REKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQ 337
R LP + L+ + E+QV+VV+G+TGCGK+TQ+PQ++L S ++ CTQ
Sbjct: 163 RAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFS-------HVACTQ 215
Query: 338 PXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVEDPDLS 397
P E G VGYQIR ES R+A T+++F T G+LLRQ+ +P L
Sbjct: 216 PRRIACISLAKRVSFESLSQYGSQVGYQIRFESTRTAATKIVFLTVGLLLRQIQREPSLP 275
Query: 398 CVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGNAPTVHI 457
L+VDE+HER ++ DF MSATIN LFS YFG AP V +
Sbjct: 276 QYQVLIVDEVHERHLHNDFLLGVLRRLLPKRPDLKVILMSATINISLFSSYFGTAPVVQV 335
Query: 458 PGLTFPVTDLFLEDVLEKTRYKMNSKLD 485
PG FP+T ++ E K + KLD
Sbjct: 336 PGRLFPITVVYQPQEAEPVASK-SEKLD 362
Score = 58 (25.5 bits), Expect = 6.0e-94, Sum P(3) = 6.0e-94
Identities = 16/60 (26%), Positives = 27/60 (45%)
Query: 883 SAYNRYSHDLEMVCAILCAGLYPNVV-----QCKRKGKRAVFYTKEVGQVALHPSSVNAN 937
SA + + ++ +L GLYP + RK +F+T+ LHP+ + AN
Sbjct: 786 SAQDLTRDQMALLKLVLGRGLYPQLAVPDPFNSSRKDSDQIFHTQSKQGTVLHPTCIFAN 845
>POMBASE|SPCC895.09c [details] [associations]
symbol:ucp12 "ATP-dependent RNA helicase Ucp12
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=ISS] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008150 "biological_process" evidence=ND] [GO:0043130
"ubiquitin binding" evidence=ISM] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR009060 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50908
PROSITE:PS51194 SMART:SM00490 SMART:SM00591 SMART:SM00847
PomBase:SPCC895.09c GO:GO:0005829 GO:GO:0005524 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0003676 PROSITE:PS50030
InterPro:IPR016135 SUPFAM:SSF54495 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0043130 SUPFAM:SSF46934 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 PIR:T41647
RefSeq:NP_588050.1 ProteinModelPortal:O94536
EnsemblFungi:SPCC895.09c.1 GeneID:2539263 KEGG:spo:SPCC895.09c
HOGENOM:HOG000167651 OMA:GWARIGV OrthoDB:EOG4Z65WS NextBio:20800433
Uniprot:O94536
Length = 1327
Score = 565 (203.9 bits), Expect = 2.1e-93, Sum P(3) = 2.1e-93
Identities = 147/402 (36%), Positives = 221/402 (54%)
Query: 535 QIDLGLVESTIEYICRHEGD--GAILVFLTGWNDISKLLDQIKVNKFLGDPNKFLVLPLH 592
+ID L+ + I G G+ILVFL G ++I++ + +IK +K D +KF VLPLH
Sbjct: 792 EIDYHLISRLVSSIDAELGSSSGSILVFLPGVSNIARCIREIK-SK---DGSKFEVLPLH 847
Query: 593 GSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLAC 652
S+ T QR F KRKI+ ATNIAE+SITIDDVV V+D G+ K+ YD L
Sbjct: 848 ASLNTSEQRRCFKTY--TKRKIICATNIAETSITIDDVVAVIDSGRVKQIDYDVERDLVT 905
Query: 653 LLPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHD-AMLPYQLPEILRTPLQELCLHI- 710
+W S+A+ QRRGRAGRV+ G+CYKLY R + ML PE+LRT L ++CL++
Sbjct: 906 FKETWASRAACQQRRGRAGRVKKGICYKLYTRGFEEKGMLGQTPPEVLRTALSQVCLNVV 965
Query: 711 ----------KSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHL 760
S+ G++ F++ + PP+ V A++ L +GAL E+LT LG +L
Sbjct: 966 PLVKRFSSAGNSVNQGSIKKFMNSLIDPPNDATVDLALKKLIQVGALTVSEDLTGLGEYL 1025
Query: 761 CTLPVDPNIGKMLLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSC 820
+LP+D +GK+L+ G+IF L PALTI A L+ ++PF L + +E+ RS
Sbjct: 1026 VSLPIDLKLGKLLVFGSIFGYLEPALTITAILSTKSPF-LGDDEAREI----RSKQSQGW 1080
Query: 821 SDHIALLKAFDGYKDAKRNRRER---DFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVD 877
D +A + + + + R + +C E L TLQ + R++ + +
Sbjct: 1081 GDVLADARVYHNWLEILETRGVKKTVQWCEEMHLHYTTLQQIRQNRNELSEAAQLLELTT 1140
Query: 878 KSKGPSAYNRYS-HDLEMVCAILCAGLYPNVVQCKRKGKRAV 918
K K ++ YS +L ++ ++ A L PNVV+C K+ V
Sbjct: 1141 K-KLTGNFDWYSTENLTVLSTLIAAALSPNVVKCVYPDKKFV 1181
Score = 402 (146.6 bits), Expect = 2.1e-93, Sum P(3) = 2.1e-93
Identities = 101/284 (35%), Positives = 150/284 (52%)
Query: 195 LQMSIETE-RRVGNLLNSSQGNVPVNDSGIESSEVARRPKLSVKVANTISPPQSDSAKER 253
LQ +IE + +G+LLN S + V+ SS+ P + K N+ P ++E
Sbjct: 497 LQENIEDFLQNIGSLLNISAATIGVS----LSSQNKSAP--TAKKNNSFKPKLFRRSREL 550
Query: 254 LNVILKERQEKLKSSDSGKAMLSFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQ 313
+ E++KS S + + REKLPA++ + + + A+ +QV+V+SGETG GK+TQ
Sbjct: 551 SEKLCNNWSERVKSP-SYQLKVREREKLPAWESRRKIMDAIQHSQVVVISGETGSGKSTQ 609
Query: 314 LPQFILEEELSSLRGADCNIICTQPXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRS 373
+ QFIL+ LSS ++CTQP ER +G+ VGY + E S
Sbjct: 610 VVQFILDHYLSSGEKDLQTVVCTQPRRISAISLAERVAFERDTTVGKEVGYSVHGEKSIS 669
Query: 374 AQTRLLFCTTGVLLRQLVEDP--DLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXX 431
+T L FCTTG+LLR++ + LS +S ++VDE+HER + D
Sbjct: 670 KETLLEFCTTGLLLRRIQQHGLGFLSTLSCVVVDEVHERSIENDILLTLLKLVISRIPNL 729
Query: 432 XXXXMSATINADLFSKYFGNAPTVHIPGLTFPVTDLFLEDVLEK 475
MSAT+N+D F YFGNA +HI G TFP+ D ++ED K
Sbjct: 730 KVILMSATVNSDTFKYYFGNAGHLHIHGRTFPIKDYYIEDFAPK 773
Score = 96 (38.9 bits), Expect = 2.1e-93, Sum P(3) = 2.1e-93
Identities = 29/118 (24%), Positives = 62/118 (52%)
Query: 908 VQCKRKGKRAVFYTKEVGQVALHPSS---VNANQNNFPLPYMVYSEMVKTNNINVYDSTN 964
++ +++ + FY + ++ +HPSS VN+ N ++ Y + V+T + + T
Sbjct: 1188 LEMEQEARLTKFYDQNNQRLFIHPSSTMFVNS-PNASRCTFVAYEQKVETTKPFLRNCTP 1246
Query: 965 ISEYALLLFGGN-LIPSKTGEGIEMLGGYLHFSASKTVLELIRKLRGELDKLLNRKIE 1021
I+ Y ++L G N ++ G+G+ + Y + K V+ L++ L+ LD L+ ++E
Sbjct: 1247 INTYGMILLGANDILIDPLGKGLILDQAYCIKAWPKVVI-LLKMLKRCLDASLHERLE 1303
>MGI|MGI:1918973 [details] [associations]
symbol:Dhx34 "DEAH (Asp-Glu-Ala-His) box polypeptide 34"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005622
"intracellular" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 InterPro:IPR015880
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00355 SMART:SM00490 SMART:SM00847
MGI:MGI:1918973 GO:GO:0005524 GO:GO:0008270 GO:GO:0003723
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
CTD:9704 HOGENOM:HOG000232193 ChiTaRS:DHX34 EMBL:AK129062
EMBL:AK004733 IPI:IPI00113303 RefSeq:NP_082159.3 UniGene:Mm.75259
ProteinModelPortal:Q9DBV3 SMR:Q9DBV3 PhosphoSite:Q9DBV3
PaxDb:Q9DBV3 PRIDE:Q9DBV3 Ensembl:ENSMUST00000094816
Ensembl:ENSMUST00000163968 GeneID:71723 KEGG:mmu:71723
GeneTree:ENSGT00700000104421 HOVERGEN:HBG051355 NextBio:334335
Bgee:Q9DBV3 CleanEx:MM_DHX34 Genevestigator:Q9DBV3
GermOnline:ENSMUSG00000006019 Uniprot:Q9DBV3
Length = 1145
Score = 610 (219.8 bits), Expect = 3.1e-91, Sum P(3) = 3.1e-91
Identities = 139/340 (40%), Positives = 195/340 (57%)
Query: 552 EGDGAILVFLTGWNDISKLLDQIKVNKFLGDPNKFLVLPLHGSMPTINQREIFDRPPPNK 611
E G +LVFL+G +I+ +LD + L +++VLPLH ++ +Q ++FD P
Sbjct: 378 EERGDLLVFLSGMAEITTVLDAAQAYASL--TQRWVVLPLHSALSVSDQDKVFDVAPAGV 435
Query: 612 RKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAG 671
RK +L+TNIAE+S+TID + +VVD GK KE SYD KL L WIS+ASA QR+GRAG
Sbjct: 436 RKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAG 495
Query: 672 RVQPGVCYKLYPRIIHDAMLPYQLPEILRTPLQELCLHIKSLQLGTVGSFLSKALQPPDP 731
R PGVCY+LY +DA PY +PEI R L L L +KS+ +G +F ++PP P
Sbjct: 496 RTGPGVCYRLYAESDYDAFAPYPVPEIRRVALDALVLQMKSMSVGDPRTF--PFIEPPPP 553
Query: 732 LAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGKMLLMGAIFQCLNPALTIAAA 791
+V+ AI L+ GALD E LTP+G L LPVD IGKML++G++F P LTIAAA
Sbjct: 554 ASVETAILYLQEQGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFSLAEPVLTIAAA 613
Query: 792 LAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAKRNR--RERDFCWEN 849
L+ ++PF + A+R D D L F+ + K R R +C
Sbjct: 614 LSVQSPFTRSAQSNLDCATARRPLESDQ-GDPFTLFNVFNAWVQVKSERSGNSRKWCRRR 672
Query: 850 FLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYS 889
+ L M ++R QF +LL D G + ++ + + YS
Sbjct: 673 GVEEHRLYEMANLRRQFKELLEDHGLLSGAQVVAPGDSYS 712
Score = 363 (132.8 bits), Expect = 3.1e-91, Sum P(3) = 3.1e-91
Identities = 88/242 (36%), Positives = 123/242 (50%)
Query: 244 PPQSDSAKERLNVILKERQEKLKSSDSGKAMLSFREKLPAFKMKAEFLKAVAENQVLVVS 303
PP+ S R + + Q+K K R LP + L+ + E+QV+VV+
Sbjct: 128 PPERVSEFRRALLHYLDFQQKQAFGRLAKLQRE-RAALPIAQYGNRILQTLKEHQVVVVA 186
Query: 304 GETGCGKTTQLPQFILEEELSSLRGADCNIICTQPXXXXXXXXXXXXXXERGENLGETVG 363
G+TGCGK+TQ+PQ++L S ++ CTQP E G VG
Sbjct: 187 GDTGCGKSTQVPQYLLAAGFS-------HVACTQPRRIACISLAKRVGFESLSQYGSQVG 239
Query: 364 YQIRLESKRSAQTRLLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFXXXXXXX 423
YQIR ES RSA T+++F T G+LLRQ+ +P L L+VDE+HER ++ DF
Sbjct: 240 YQIRFESTRSAATKIVFLTVGLLLRQIQREPSLPQYQVLIVDEVHERHLHNDFLLGVLQR 299
Query: 424 XXXXXXXXXXXXMSATINADLFSKYFGNAPTVHIPGLTFPVTDLFLEDVLEKTRYKMNSK 483
MSATIN LFS YF +AP V +PG FP+T ++ ++T K + K
Sbjct: 300 LLPQRPDLKVILMSATINISLFSSYFSHAPVVQVPGRLFPITVVYQPQEADQTASK-SEK 358
Query: 484 LD 485
LD
Sbjct: 359 LD 360
Score = 58 (25.5 bits), Expect = 3.1e-91, Sum P(3) = 3.1e-91
Identities = 18/60 (30%), Positives = 27/60 (45%)
Query: 883 SAYNRYSHDLEMVCAILCAGLYPNVV-----QCKRKGKRAVFYTKEVGQVALHPSSVNAN 937
SA + L ++ +L GLYP + RK +F+T+ LHP+ V AN
Sbjct: 788 SAQDLTRDQLALLKLVLGRGLYPQLAVPDAFNSGRKDSDQIFHTQAKQGTVLHPTCVFAN 847
Score = 38 (18.4 bits), Expect = 3.6e-57, Sum P(3) = 3.6e-57
Identities = 16/59 (27%), Positives = 28/59 (47%)
Query: 99 PVWRAERLRQQAAEMEVFDQNEWWGKLEQMKRGEEQEMIIKRKFSRADQQTLADMAHQL 157
P R R+ F Q + +G+L +++R E + I + +R QTL + HQ+
Sbjct: 128 PPERVSEFRRALLHYLDFQQKQAFGRLAKLQR-ERAALPIAQYGNRI-LQTLKE--HQV 182
>UNIPROTKB|F1RLY9 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 InterPro:IPR015880
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00355 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:9704 OMA:DSDQVFH GeneTree:ENSGT00700000104421
EMBL:FP102420 RefSeq:XP_003127294.1 Ensembl:ENSSSCT00000003454
GeneID:100515780 KEGG:ssc:100515780 Uniprot:F1RLY9
Length = 1146
Score = 586 (211.3 bits), Expect = 5.1e-88, Sum P(3) = 5.1e-88
Identities = 135/340 (39%), Positives = 194/340 (57%)
Query: 552 EGDGAILVFLTGWNDISKLLDQIKVNKFLGDPNKFLVLPLHGSMPTINQREIFDRPPPNK 611
E G +LVFL+G +I +L+ + + +++VLPLH ++ Q ++FD PP
Sbjct: 376 EERGDLLVFLSGLAEIGAVLEAAQAHARRS--GRWVVLPLHSTLSVAAQDKVFDVAPPGV 433
Query: 612 RKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAG 671
RK +L+TNIAE+S+TID + +VVD GK KE SYD KL L WIS+ASA QR+GRAG
Sbjct: 434 RKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAG 493
Query: 672 RVQPGVCYKLYPRIIHDAMLPYQLPEILRTPLQELCLHIKSLQLGTVGSFLSKALQPPDP 731
R PGVC++LY +DA PY +PEI R L L L +KS+ +G +F ++PP
Sbjct: 494 RTGPGVCFRLYAESDYDAFAPYPVPEIRRVALDALVLQMKSMSVGDPRTF--PFIEPPPA 551
Query: 732 LAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGKMLLMGAIFQCLNPALTIAAA 791
+++ AI L+ GALD E LTP+G L LPVD IGKML++G++ P LTIAAA
Sbjct: 552 ASLETAILYLRDQGALDGSEALTPIGSLLAQLPVDIVIGKMLVLGSVLHLAEPVLTIAAA 611
Query: 792 LAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAKRNR--RERDFCWEN 849
L+ ++PF + A R+ D D L F+ + K +R + R +C
Sbjct: 612 LSVQSPFTRSTRSNPKC--AWRALESDH-GDPFTLFNVFNNWVQVKSDRSTKSRRWCRRE 668
Query: 850 FLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYS 889
+ L M ++R QF +LL D G + ++ P + YS
Sbjct: 669 GIEEHRLYEMANLRRQFKELLEDHGLLAGTQAPKPGDSYS 708
Score = 356 (130.4 bits), Expect = 5.1e-88, Sum P(3) = 5.1e-88
Identities = 80/208 (38%), Positives = 110/208 (52%)
Query: 278 REKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQ 337
R LP + + L+ + E+QV+VV+G+TGCGK+TQ+PQ++L S ++ CTQ
Sbjct: 159 RAALPISQYRDRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFS-------HVACTQ 211
Query: 338 PXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVEDPDLS 397
P E G VGYQIR ES RSA T+++F T G+LLR + +P L
Sbjct: 212 PRRIACISLAKRVGLESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLRHVQREPTLP 271
Query: 398 CVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGNAPTVHI 457
L+VDE+HER ++ DF MSAT+N LFS YFG AP V +
Sbjct: 272 QYRVLIVDEVHERHLHNDFLLGVLQRLLPRRPDLKVILMSATVNTSLFSAYFGQAPVVQV 331
Query: 458 PGLTFPVTDLFLEDVLEKTRYKMNSKLD 485
PG FP+T ++ E T + KLD
Sbjct: 332 PGRLFPITVVYQPQEAEPTASTLE-KLD 358
Score = 62 (26.9 bits), Expect = 5.1e-88, Sum P(3) = 5.1e-88
Identities = 18/60 (30%), Positives = 26/60 (43%)
Query: 883 SAYNRYSHDLEMVCAILCAGLYPNVV-----QCKRKGKRAVFYTKEVGQVALHPSSVNAN 937
SA R + ++ +L GLYP RK +F+T+ LHP+ V AN
Sbjct: 785 SAQVRTRDQMTLLKLVLARGLYPQFAIPDPFNSSRKDSDQIFHTQAKQGAVLHPTCVFAN 844
>ZFIN|ZDB-GENE-061207-30 [details] [associations]
symbol:dhx34 "DEAH (Asp-Glu-Ala-His) box polypeptide
34" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IMP] [GO:0009790 "embryo
development" evidence=IMP] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR015880
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00355
SMART:SM00490 SMART:SM00847 ZFIN:ZDB-GENE-061207-30 GO:GO:0005524
GO:GO:0000184 GO:GO:0008270 GO:GO:0003676 GO:GO:0005622
GO:GO:0009790 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
CTD:9704 HOGENOM:HOG000232193 OMA:DSDQVFH OrthoDB:EOG4GB75B
GeneTree:ENSGT00700000104421 HOVERGEN:HBG051355 EMBL:BX908775
IPI:IPI00503372 RefSeq:NP_001121805.1 UniGene:Dr.50626
Ensembl:ENSDART00000086943 GeneID:555838 KEGG:dre:555838
InParanoid:A2BIE5 NextBio:20881188 Uniprot:A2BIE5
Length = 1150
Score = 579 (208.9 bits), Expect = 2.6e-87, Sum P(4) = 2.6e-87
Identities = 128/332 (38%), Positives = 191/332 (57%)
Query: 552 EGDGAILVFLTGWNDISKLLDQIKVNKFLGDPNKFLVLPLHGSMPTINQREIFDRPPPNK 611
E G +L+FL+G +IS + + + + +++VLPLH ++ Q ++FD PP
Sbjct: 376 EERGDLLLFLSGVAEISTIQEACQT--YATHTQRWIVLPLHSTLSLAQQDKVFDIAPPGV 433
Query: 612 RKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAG 671
RK +++TNIAE+S+TID V +VVD GK KE S+D K+ L WIS+AS+ QR+GRAG
Sbjct: 434 RKCIISTNIAETSVTIDGVRFVVDSGKVKEMSFDPKAKMQRLQEFWISRASSEQRKGRAG 493
Query: 672 RVQPGVCYKLYPRIIHDAMLPYQLPEILRTPLQELCLHIKSLQLGTVGSFLSKALQPPDP 731
R PGVCY+LY +DA PY +PEI R L L L +KS+ LG +F + PP
Sbjct: 494 RTGPGVCYRLYSESDYDAFAPYPVPEIHRVALDSLILQMKSMGLGDPRTFTF--IDPPPA 551
Query: 732 LAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGKMLLMGAIFQCLNPALTIAAA 791
++Q A+ L+ GALD+ LT +GR L LPVD IGKML++G++F + P LT+AAA
Sbjct: 552 SSIQTAVTYLREQGALDEHGELTSIGRLLAQLPVDVVIGKMLVLGSVFNLVEPVLTVAAA 611
Query: 792 LAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAKRNRRE--RDFCWEN 849
L+ ++PF+ + A++ + D L+ F+ + K +R R +C
Sbjct: 612 LSVQSPFLRSAQHNPDCSTARQPLNSNH-GDPFTLMNTFNAWVQVKADRGSGSRKWCRRR 670
Query: 850 FLSPITLQMMEDMRSQFLDLLSDIGFVDKSKG 881
L L M ++R QF +LL G ++ G
Sbjct: 671 GLEEQRLYEMVNLRRQFKELLRSHGLLEDDTG 702
Score = 346 (126.9 bits), Expect = 2.6e-87, Sum P(4) = 2.6e-87
Identities = 80/221 (36%), Positives = 118/221 (53%)
Query: 266 KSSDSGKAMLSFREK-LPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELS 324
K S S + L +K LP F+ + + ++ V + V+VV+G+TGCGK+TQ+PQ++L ++
Sbjct: 146 KQSFSKLSKLRREQKSLPIFQYRDKIVELVRTHPVVVVAGDTGCGKSTQVPQYLLASGIN 205
Query: 325 SLRGADCNIICTQPXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLLFCTTG 384
NI CTQP E G VGYQIR E+ R+ T+LLF T G
Sbjct: 206 -------NIACTQPRRIACISLAKRVSFESLNQYGSKVGYQIRFETSRTLATKLLFLTEG 258
Query: 385 VLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINADL 444
+LLRQ+ +D L L+VDE+HER ++ DF MSATIN L
Sbjct: 259 LLLRQIQQDASLGQYQVLIVDEVHERHLHCDFLLGVLRSLLSLRPDLRLVLMSATINIKL 318
Query: 445 FSKYFGNAPTVHIPGLTFPVTDLFLEDVLEKTRYKMNSKLD 485
FS YF +AP + +PG FP+ ++ + + + + + KLD
Sbjct: 319 FSSYFNDAPVLQVPGRLFPIQVIY-QPIPPEEQVSRSEKLD 358
Score = 73 (30.8 bits), Expect = 2.6e-87, Sum P(4) = 2.6e-87
Identities = 21/64 (32%), Positives = 31/64 (48%)
Query: 898 ILCAGLYPNVV-----QCKRKGKRAVFYTKEVGQVALHPSSVNANQNN-FPLPYMVYSEM 951
+LC GLYP + RK VF+T+ V +HP+SV A+ +P SE
Sbjct: 812 LLCRGLYPQLAIPDEHNATRKDSDQVFHTRNKQGVVIHPTSVFASDPEVLHVPEHETSEF 871
Query: 952 VKTN 955
++N
Sbjct: 872 GQSN 875
Score = 42 (19.8 bits), Expect = 2.1e-55, Sum P(3) = 2.1e-55
Identities = 15/65 (23%), Positives = 29/65 (44%)
Query: 247 SDSAKERLNVILKERQEKLKS-SDSGKAMLSFREKLPAFKMKAEFLKAVAENQVLVVSGE 305
S + +L+ + + + +++ S K SF E+ +FK K E + + Q V+
Sbjct: 15 SPRCRAQLDEVFFRQHDYIQAGSAEHKEFWSFFERFQSFKAKKEMTASKSSRQEKHVALR 74
Query: 306 TGCGK 310
G K
Sbjct: 75 EGKAK 79
Score = 41 (19.5 bits), Expect = 2.6e-87, Sum P(4) = 2.6e-87
Identities = 11/28 (39%), Positives = 14/28 (50%)
Query: 246 QSDSAKERLNVILKERQEKLKSSDSGKA 273
QS AK+ + RQEK + GKA
Sbjct: 51 QSFKAKKEMTASKSSRQEKHVALREGKA 78
>ASPGD|ASPL0000059403 [details] [associations]
symbol:AN0133 species:162425 "Emericella nidulans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000390 "spliceosomal complex disassembly" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0030686 "90S preribosome" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0071014 "post-mRNA release
spliceosomal complex" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:BN001308 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACD01000004 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820
OMA:TVLQIHA OrthoDB:EOG4S7NZ4 RefSeq:XP_657737.1 STRING:Q5BH47
EnsemblFungi:CADANIAT00002613 GeneID:2875910 KEGG:ani:AN0133.2
Uniprot:Q5BH47
Length = 769
Score = 575 (207.5 bits), Expect = 8.6e-87, Sum P(2) = 8.6e-87
Identities = 151/431 (35%), Positives = 228/431 (52%)
Query: 541 VESTIEYICR-H--EGDGAILVFLTGWNDISKLLDQIKV--NKFL--GDPNKFLVLPLHG 593
VE+ I + + H E +G IL+FLTG +I +I + ++ + D V L+G
Sbjct: 293 VEAAIRTVLQIHATEDEGDILLFLTGEEEIEDAARKISLEGDEMIREADAGPLKVYTLYG 352
Query: 594 SMPTINQREIFD-RPPPNK------RKIVLATNIAESSITIDDVVYVVDCGKAKETSYDA 646
S+P Q+ IF+ PPP + RK++++TNIAE+S+TID +VYVVD G +K+ Y+
Sbjct: 353 SLPPHMQQRIFEPAPPPRRPGGRPGRKVIVSTNIAETSLTIDGIVYVVDPGFSKQKIYNP 412
Query: 647 LNKLACLLPSWISKASAHQRRGRAGRVQPGVCYKLYPR-IIHDAMLPYQLPEILRTPLQE 705
++ LL S ISKASA QR GRAGR +PG C++LY ++ PEILR+ L
Sbjct: 413 RIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTESAFKKELIDQTYPEILRSNLSS 472
Query: 706 LCLHIKSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPV 765
L +K L + + F + PP P + A+E L + LDD NLTPLGR P+
Sbjct: 473 TVLELKKLGIDDLVHF--DLMDPPAPETLMRALEELNYLACLDDDGNLTPLGRLASEFPL 530
Query: 766 DPNIGKMLLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIA 825
DP + ML+ F C N L+I A L+ FV P + +K DE K FA DH+
Sbjct: 531 DPALAVMLISSPEFYCSNEILSITALLSVPQIFVRPASQRKRADEMKNLFAHPD-GDHLT 589
Query: 826 LLKAFDGYKDAKRNRRERDFCWENFLSPITLQMMEDMRSQFLDLLS--DIGFVDKSKGPS 883
LL A+ +K + + +C ++FLS +LQ +++R Q L ++ ++ + S
Sbjct: 590 LLNAYHAFKSPEAQENPKQWCHDHFLSLRSLQSADNVRMQLLRIMEREELEMISTSFEDK 649
Query: 884 AYNRYSHDLEMVCAILCAGLYPNVVQCKRKGKRAVFYTKEVGQVALHPSSVNANQNNFPL 943
Y Y E + LCAG + V + + +GK K+ V LHPS+V A+
Sbjct: 650 KY--Y----ENIRRALCAGFFMQVAKKENQGKSMYMTIKDHQNVLLHPSTVLAHDAE--- 700
Query: 944 PYMVYSEMVKT 954
+++Y+E V T
Sbjct: 701 -WVLYNEFVLT 710
Score = 326 (119.8 bits), Expect = 8.6e-87, Sum P(2) = 8.6e-87
Identities = 74/196 (37%), Positives = 104/196 (53%)
Query: 273 AMLSFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCN 332
++L R LP + EFL+ ++Q+LV GETG GKTTQ+PQF+L ++L +
Sbjct: 91 SILKTRRDLPVHAQRDEFLQLYQQSQILVFVGETGSGKTTQIPQFVLLDDLPQTQRK--M 148
Query: 333 IICTQPXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVE 392
I CTQP E LGE VGY IR E S +T L + T G+LLR+ +
Sbjct: 149 IACTQPRRVAAMSVAQRVAAELDVTLGEEVGYSIRFEDMTSPKTLLKYMTDGMLLREAMN 208
Query: 393 DPDLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGNA 452
D +LS S +++DE HER M+ D MSAT++A F +YF +A
Sbjct: 209 DHELSRYSTIILDEAHERTMSTDVLMGLLKEVVQRRPDLKIIIMSATLDAQKFQRYFNDA 268
Query: 453 PTVHIPGLTFPVTDLF 468
P + +PG T PV ++F
Sbjct: 269 PLLAVPGRTHPV-EIF 283
>DICTYBASE|DDB_G0285213 [details] [associations]
symbol:dhx15 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA;ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0285213 GO:GO:0005524
GenomeReviews:CM000153_GR GO:GO:0008380 GO:GO:0006397 GO:GO:0005681
GO:GO:0003676 EMBL:AAFI02000076 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 KO:K12820 OMA:TVLQIHA RefSeq:XP_638323.1
ProteinModelPortal:Q54NJ4 EnsemblProtists:DDB0233403 GeneID:8624993
KEGG:ddi:DDB_G0285213 Uniprot:Q54NJ4
Length = 727
Score = 566 (204.3 bits), Expect = 2.0e-86, Sum P(2) = 2.0e-86
Identities = 157/471 (33%), Positives = 250/471 (53%)
Query: 528 LEAWSAEQIDLGLVESTIEYIC---RHEGDGAILVFLTGWNDISKLLDQI-KVNKFLGDP 583
+E + E+ +ES + + +EG G ILVFLTG +I +I + + G P
Sbjct: 257 VEIFYTEEAAKDYLESAVRTVIDIHTNEGTGDILVFLTGEEEIEDTCAKIQRETRERGLP 316
Query: 584 NKFLVLPLHGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETS 643
LPL+ S+P Q +IFD +RK +++TNIAE+S+TID +V+VVD G +K+ +
Sbjct: 317 -PMKTLPLYSSLPIYQQSKIFDTC--KERKCIVSTNIAETSLTIDGIVFVVDPGFSKQKT 373
Query: 644 YDALNKLACLLPSWISKASAHQRRGRAGRVQPGVCYKLYP-RIIHDAMLPYQLPEILRTP 702
Y+ +++ LL + ISKASA+QR GRAGR +PG C++LY + + M+ PEILR+
Sbjct: 374 YNPRSRVESLLVAPISKASANQRAGRAGRTRPGKCFRLYTEKAFKELMIQQTHPEILRSN 433
Query: 703 LQELCLHIKSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCT 762
L + L + L+LG V + PP P + A+E+L +GALDD LT +G +
Sbjct: 434 LASVVLQL--LKLGVVDLVHFDFMDPPVPDTLIRALEVLHYLGALDDEGQLTEIGSIMSE 491
Query: 763 LPVDPNIGKMLLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSD 822
P+DP + KML++ A C N LTIAA L+ N F+ P + + E D AK+SF D
Sbjct: 492 FPLDPQLSKMLIVSAERSCSNEILTIAAMLSAPNCFMRPKDNRIEADSAKKSFDHFD-GD 550
Query: 823 HIALLKAFDGYKDAKRNRRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGP 882
H+ +L + +K +N + +C++NFL+ ++ + +RSQ +L+ S G
Sbjct: 551 HLTMLNVYHSFK---KNGEDPTWCYDNFLNHRAIKQADSVRSQLARILTRFKLPLVS-GD 606
Query: 883 SAYNRYSHDLEMVCAILCAGLYPNVVQCKRKGKRAVFYTKEVGQ-VALHPSSVNANQNNF 941
Y +++ C + AG + V +C++K +++T Q V HPS+ + F
Sbjct: 607 VNSKFYYENIKK-C--IAAGFFMQVAKCEKKN---IYFTLGDEQSVIFHPSTGLTRRPEF 660
Query: 942 PLPYMVYSEMVKTNNINVYDSTNIS-----EYALLLFGGNLIPSKTGEGIE 987
+Y+E V T+ + T++ E A F P KT E I+
Sbjct: 661 ----CIYNEFVLTSENYIRTITDVKFDWLLELAPSYFKQKSFPKKTKETIQ 707
Score = 332 (121.9 bits), Expect = 2.0e-86, Sum P(2) = 2.0e-86
Identities = 73/198 (36%), Positives = 106/198 (53%)
Query: 274 MLSFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNI 333
+L R++LP +K K +F+K + ENQV+++ GETG GKTTQ+PQF+++ L +R +
Sbjct: 70 ILEKRKELPVWKQKEDFIKVIKENQVVILVGETGSGKTTQIPQFVVDAGL--IRPGKM-V 126
Query: 334 ICTQPXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVED 393
TQP E LGE VGY IR E SA+T + + T G+LLR+ + D
Sbjct: 127 GVTQPRRVAAISVAKRVSEEMDFELGEEVGYSIRFEELSSARTFMKYLTDGMLLRESMSD 186
Query: 394 PDLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGNAP 453
P L+ +++DE HER ++ D MSAT+ A F KYF NAP
Sbjct: 187 PTLNKYDVIILDEAHERTLSTDILFGLIKDILKRRKDLKLIVMSATLEAGKFQKYFENAP 246
Query: 454 TVHIPGLTFPVTDLFLED 471
+ +PG PV + E+
Sbjct: 247 LIKVPGRLHPVEIFYTEE 264
>SGD|S000004411 [details] [associations]
symbol:YLR419W "Putative helicase with limited sequence
similarity to human Rb protein" species:4932 "Saccharomyces
cerevisiae" [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50908 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00591 SMART:SM00847
SGD:S000004411 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
EMBL:BK006945 InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030
Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:U20162
RefSeq:NP_013525.3 GeneID:851140 KEGG:sce:YLR421C KO:K06691
HOGENOM:HOG000167651 OMA:GWARIGV OrthoDB:EOG4Z65WS
RefSeq:NP_013523.3 GeneID:851137 KEGG:sce:YLR419W PIR:S59384
ProteinModelPortal:Q06698 SMR:Q06698 IntAct:Q06698
MINT:MINT-2492948 STRING:Q06698 PaxDb:Q06698 PeptideAtlas:Q06698
PRIDE:Q06698 EnsemblFungi:YLR419W CYGD:YLR419w
GeneTree:ENSGT00680000101018 NextBio:967890 Genevestigator:Q06698
GermOnline:YLR419W Uniprot:Q06698
Length = 1435
Score = 526 (190.2 bits), Expect = 4.1e-86, Sum P(4) = 4.1e-86
Identities = 134/414 (32%), Positives = 233/414 (56%)
Query: 508 FEDVDIDS-NYKNYRASTRASLEAWSAEQIDLGLVESTIEYICRH----EGDGAILVFLT 562
++D +D N + RA + +++ QI+ L+ +EY+ + +G+I+VFL
Sbjct: 812 YDDDSVDERNNDDQYLKPRADSKFFTSGQINYDLLCQVVEYVHKRLKAANDNGSIIVFLP 871
Query: 563 GWNDISKLLDQIKVNKFLGDPNKFLVLPLHGSMPTINQREIFDRPPPNKRKIVLATNIAE 622
G +I+K + + NK + F+VLPLH ++ +Q+ +F + KRK+V++TNIAE
Sbjct: 872 GVGEINKCCNLL-ANK--SNEADFMVLPLHSALTPEDQKRVFKKYH-GKRKVVVSTNIAE 927
Query: 623 SSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPGVCYKLY 682
+SITIDD V +D G+AK Y+ + L+ S+ISKA QRRGRAGRV+ G+ YKL+
Sbjct: 928 TSITIDDCVATIDTGRAKSMFYNPKDNTTKLIESFISKAEVKQRRGRAGRVREGLSYKLF 987
Query: 683 PRIIHDA-MLPYQLPEILRTPLQELCLHIKSLQLGTVGSFLSKALQPPDPLAVQNAIELL 741
+ +++ M+ +PEI R PL+ L L +K++ + V +FLS AL P A+Q A +L
Sbjct: 988 SKNLYENDMISMPIPEIKRIPLESLYLSVKAMGIKDVKAFLSTALDAPPLPALQKAERIL 1047
Query: 742 KTIGALDDME-NLTPLGRHLCTLPV-DPNIGKMLLMGAIFQCLNPALTIAAALAHRN-PF 798
TIG +D+ + +LT LG+ + +PV D GK+L+ G +F C + ++ + + L PF
Sbjct: 1048 TTIGLVDESDKSLTQLGQFISLMPVMDSKHGKLLIYGILFGCTDISVLLVSILGIGVLPF 1107
Query: 799 VLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAKRNRRERDFCWENFLSPITLQM 858
+ ++++ + + +S D A+L+ Y K + +R + +N LS +
Sbjct: 1108 IGGFENREKIKKLLCKY--ESRGDLFAVLEIVRDYFKIKDSSIKRKYLRDNLLSYNKINE 1165
Query: 859 MEDMRSQFLDLLSDIGFV--DKSKGP-SAYNRYSHDLEMVCAILCAGLYPNVVQ 909
++ +Q+ +L D+GF+ D G S NR + +++ AIL YP++ +
Sbjct: 1166 IKSSTAQYYSILKDVGFLPMDYKVGSISDLNRNERNFDILRAILTGAFYPHIAR 1219
Score = 395 (144.1 bits), Expect = 4.1e-86, Sum P(4) = 4.1e-86
Identities = 111/380 (29%), Positives = 186/380 (48%)
Query: 202 ERRVGNLLNSSQGNVPVNDS-GIESSEVARRPKLSVKVANTISPPQSDSAKERLNVILKE 260
+ + ++++ +P +DS G + K S+ +++ ++ +++ L+V+ +E
Sbjct: 525 KENISKIIDNPGPLIPDSDSKGAINKRNISNGKRSINNSSSRKFTKTTISEDTLSVLREE 584
Query: 261 RQEKLKSSDSGKAMLSFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILE 320
+++KSS+ K+M RE+LPA+K + + + +N+V++++GETG GK+TQ+ QFIL+
Sbjct: 585 YTKRIKSSEY-KSMQLVREQLPAWKKQKVIIDIINKNEVVLITGETGSGKSTQVVQFILD 643
Query: 321 EELSSLRG--ADCNIICTQPXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRL 378
L +G I+CTQP ER GE VGY IR +K A TR+
Sbjct: 644 F-LQKEKGDFGKTKIVCTQPRRISAIGLAERVSDERCVTCGEEVGYVIRGVNKTKASTRI 702
Query: 379 LFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSA 438
F TTGVL+R L + + +++DE+HER ++ D MSA
Sbjct: 703 KFMTTGVLVRLLQNARTMLENTIVVIDEVHERSIDTDLIVTLMKNLLHRVRGMKIVLMSA 762
Query: 439 TINADLFSKYFGNAPTVHIPGLTFPVTDLFLEDVLEKTRYKMNSKLDSFQGNXXXXXXQD 498
T+N DLF K+F T HI G TFP+TD FLED+L +K+ + D
Sbjct: 763 TVNVDLFKKFFPGLATCHIEGRTFPITDYFLEDILSDLDFKIKRE--------KALSYDD 814
Query: 499 SKKDHLTALFEDVDIDSNYKNYRASTRASLEAWSAEQIDLGLVESTIEYICRHEGDGAIL 558
D + + D Y RA ++ + +VE + + +G+I+
Sbjct: 815 DSVD-------ERNNDDQYLKPRADSKFFTSGQINYDLLCQVVEYVHKRLKAANDNGSII 867
Query: 559 VFLTGWNDISKLLDQIKVNK 578
VFL G +I+K + + NK
Sbjct: 868 VFLPGVGEINKCCNLL-ANK 886
Score = 81 (33.6 bits), Expect = 4.1e-86, Sum P(4) = 4.1e-86
Identities = 25/84 (29%), Positives = 46/84 (54%)
Query: 944 PYMVYSEMVKTNNINVYDSTNISEYALLLFGGNLIPSKTGEGIEMLGGYL-HFSASKTVL 1002
P+++++ TN + + D T + +LLLFGG I G I G + ++ +T
Sbjct: 1325 PFVLFTTSQVTNKLYLRDLTPTTTLSLLLFGG-AISYDIGGTIHSPGIVVDNWLPIRTWC 1383
Query: 1003 E---LIRKLRGELDKLLNRKIEDP 1023
+ LI++LR +LD+ + +K+E P
Sbjct: 1384 KNGVLIKELRTQLDEAIRKKLESP 1407
Score = 42 (19.8 bits), Expect = 4.1e-86, Sum P(4) = 4.1e-86
Identities = 14/51 (27%), Positives = 24/51 (47%)
Query: 104 ERLRQQAAEMEVFDQNEWWGKLEQMKRGEEQEMIIKRKFSRA--DQQTLAD 152
+R +QQ+ +V W GKL E + KRK+++ D + + D
Sbjct: 41 KRAKQQSNRAKVTSTASWTGKLPHTILHETCQ---KRKWNKVEYDMKKIGD 88
Score = 41 (19.5 bits), Expect = 2.7e-49, Sum P(3) = 2.7e-49
Identities = 13/46 (28%), Positives = 22/46 (47%)
Query: 210 NSSQGNVPVNDSGIESSEVARRPKLSVKVANTISPPQSDSAKERLN 255
N+S+ + PVND + ++ A + K K P AK++ N
Sbjct: 7 NNSKSSTPVND--VPTT--AGKKKAKGKKGQEPEPEDDKRAKQQSN 48
Score = 37 (18.1 bits), Expect = 1.6e-81, Sum P(4) = 1.6e-81
Identities = 7/19 (36%), Positives = 13/19 (68%)
Query: 949 SEMVKTNNINVYDSTNISE 967
S + TN++N+ D+ +SE
Sbjct: 1289 SVLFSTNSVNLEDAKLLSE 1307
>TAIR|locus:2065210 [details] [associations]
symbol:AT2G47250 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020 GO:GO:0008380
GO:GO:0006397 GO:GO:0009941 GO:GO:0003676 EMBL:AC002337
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
EMBL:AY128301 EMBL:BT004534 IPI:IPI00540033 PIR:H84912
RefSeq:NP_182247.1 UniGene:At.36388 ProteinModelPortal:O22899
SMR:O22899 PaxDb:O22899 PRIDE:O22899 EnsemblPlants:AT2G47250.1
GeneID:819338 KEGG:ath:AT2G47250 GeneFarm:1798 TAIR:At2g47250
InParanoid:O22899 KO:K12820 OMA:XEIDEAC PhylomeDB:O22899
ProtClustDB:CLSN2683587 Genevestigator:O22899 GermOnline:AT2G47250
Uniprot:O22899
Length = 729
Score = 582 (209.9 bits), Expect = 1.1e-85, Sum P(2) = 1.1e-85
Identities = 155/429 (36%), Positives = 235/429 (54%)
Query: 547 YICRHEGDGAILVFLTGWNDISKLLDQI-KVNKFLGDP-NKFLVLPLHGSMPTINQREIF 604
++C GD ILVFLTG +I +I K LGD V+PL+ ++P Q++IF
Sbjct: 274 HMCEPPGD--ILVFLTGEEEIEDACRKINKEVSNLGDQVGPVKVVPLYSTLPPAMQQKIF 331
Query: 605 DRPP-------PNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSW 657
D P P RKIV++TNIAE+S+TID +VYV+D G AK+ Y+ ++ LL S
Sbjct: 332 DPAPVPLTEGGPAGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSP 391
Query: 658 ISKASAHQRRGRAGRVQPGVCYKLYP-RIIHDAMLPYQLPEILRTPLQELCLHIKSLQLG 716
ISKASAHQR GRAGR +PG C++LY + ++ + P PEILR+ L L +K L +
Sbjct: 392 ISKASAHQRSGRAGRTRPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGID 451
Query: 717 TVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGKMLLMG 776
+ F + PP P + A+E+L +GALDD NLT G + P+DP + KML++
Sbjct: 452 DLVHF--DFMDPPAPETLMRALEVLNYLGALDDEGNLTKTGEIMSEFPLDPQMSKMLIVS 509
Query: 777 AIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDA 836
F C N L+++A L+ N FV P QK DEAK F G DH+ LL + YK
Sbjct: 510 PEFNCSNEILSVSAMLSVPNCFVRPREAQKAADEAKARF-GHIDGDHLTLLNVYHAYK-- 566
Query: 837 KRNRRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYSHDLEMVC 896
+N + ++C+ENF++ ++ +++R Q + ++S S + +N + + +
Sbjct: 567 -QNNEDPNWCFENFVNNRAMKSADNVRQQLVRIMSRFNLKMCS---TDFNSRDYYVNIRK 622
Query: 897 AILCAGLYPNVVQCKRKGKRAVFYTKEVGQVALHPSSVNANQNNFPLPYMVYSEMVKTNN 956
A+L AG + V +R G +V V LHPS+ ++ P +++Y+E V T
Sbjct: 623 AML-AGYFMQVAHLERTGHYLTVKDNQV--VHLHPSNCLDHK---P-EWVIYNEYVLTTR 675
Query: 957 INVYDSTNI 965
+ T+I
Sbjct: 676 NFIRTVTDI 684
Score = 308 (113.5 bits), Expect = 1.1e-85, Sum P(2) = 1.1e-85
Identities = 69/200 (34%), Positives = 102/200 (51%)
Query: 274 MLSFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELS--SLRGADC 331
+L R LP + K +FL + NQ L++ GETG GKTTQ+PQF+L+ ++ S +G
Sbjct: 58 ILEKRRDLPVWLQKDDFLNTLNSNQTLILVGETGSGKTTQIPQFVLDAVVADNSDKGRKW 117
Query: 332 NIICTQPXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLV 391
+ CTQP E ++GE VGY IR E S++T L + T G+LLR+ +
Sbjct: 118 LVGCTQPRRVAAMSVSRRVADEMDVSIGEEVGYSIRFEDCTSSRTMLKYLTDGMLLREAM 177
Query: 392 EDPDLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGN 451
DP L +++DE HER + D MSAT+ A+ F +YF
Sbjct: 178 ADPLLERYKVIILDEAHERTLATDVLFGLLKEVLRNRPDLKLVVMSATLEAEKFQEYFSG 237
Query: 452 APTVHIPGLTFPVTDLFLED 471
AP + +PG PV + ++
Sbjct: 238 APLMKVPGRLHPVEIFYTQE 257
>WB|WBGene00009922 [details] [associations]
symbol:F52B5.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] InterPro:IPR001374 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF01424 Pfam:PF04408 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00393 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0009792 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:Z75541
PIR:T22493 RefSeq:NP_492260.1 ProteinModelPortal:Q20644 SMR:Q20644
STRING:Q20644 PaxDb:Q20644 EnsemblMetazoa:F52B5.3 GeneID:172615
KEGG:cel:CELE_F52B5.3 UCSC:F52B5.3 CTD:172615 WormBase:F52B5.3
InParanoid:Q20644 OMA:NSMPETQ NextBio:876269 Uniprot:Q20644
Length = 1425
Score = 393 (143.4 bits), Expect = 5.4e-85, Sum P(3) = 5.4e-85
Identities = 91/218 (41%), Positives = 130/218 (59%)
Query: 532 SAEQIDLGLVESTIEYICRHEGDGAILVFLTGWNDISKLLDQIKVNK-FLGDPNKFLVLP 590
S +D L++ I+Y+ G ILVFL G+ DI ++L I K L + +VLP
Sbjct: 622 SNNSVDYVLLDQVIQYLADSPVFGTILVFLPGYEDIQQMLKAIDCWKNSLKNMKNVIVLP 681
Query: 591 LHGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKL 650
LH M +IN +IF P + RKI+LATNIAE+SITI+DV++VVD GK KE S+D KL
Sbjct: 682 LHSQMTSINHGDIFKSVPKDTRKIILATNIAEASITIEDVIFVVDTGKVKEKSFDHEAKL 741
Query: 651 ACLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQLPEILRTPLQELCLHI 710
+ L I++++A QR GRAGRV G C +LY +++M Q+ E+ R + ++ LH
Sbjct: 742 STLTVKPIARSNADQRSGRAGRVANGYCIRLYTEQEYNSMPETQIAEMKRAAIYDVTLHA 801
Query: 711 KSLQLGT--VGSFLSKALQPPDPLAVQNAIELLKTIGA 746
K T + FLS A +PP+ ++ AI L+ IGA
Sbjct: 802 KLFAPKTLKISEFLSLAPEPPEKESILQAITFLEQIGA 839
Score = 382 (139.5 bits), Expect = 5.4e-85, Sum P(3) = 5.4e-85
Identities = 86/216 (39%), Positives = 117/216 (54%)
Query: 268 SDSGKAMLSFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLR 327
S K + R LPA K + LK+++ V+++SG TGCGKTTQ+PQFIL+E + +
Sbjct: 168 SKCSKELQKVRNSLPASKYCDQVLKSISSCNVVIISGGTGCGKTTQVPQFILDEAHENNK 227
Query: 328 GADCNIICTQPXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLL 387
++ TQP ERGE +G TVGYQ+RL+S+RS T L +CTTGVLL
Sbjct: 228 HV--RVMVTQPRRIAAISIAERVARERGEPIGRTVGYQVRLDSRRSDDTVLTYCTTGVLL 285
Query: 388 RQLVEDPDLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATI--NADLF 445
R L DP S ++H+++DEIHER +N D+ MSATI N LF
Sbjct: 286 RMLTSDPVASGITHIVMDEIHEREINTDYLLIALRECLKMRPDLKVILMSATIEGNMQLF 345
Query: 446 SKYFGN--APTVHIPGLTFPVTDLFLEDVLEKTRYK 479
S YF N + I F V +L+ +L T Y+
Sbjct: 346 SNYFENHSMDVIRIESRAFDVKVFYLDQILAMTGYQ 381
Score = 223 (83.6 bits), Expect = 5.4e-85, Sum P(3) = 5.4e-85
Identities = 60/201 (29%), Positives = 101/201 (50%)
Query: 748 DDMENLTPLGRHLCTLPVDPNIGKMLLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKE 807
+D E LT LGR + LP+DP + +MLL G +CL P + + A LA R P+VL ++ ++
Sbjct: 869 EDPE-LTDLGRLMARLPLDPQLSRMLLFGLALKCLTPIVNLVALLASREPYVLALSEDRD 927
Query: 808 VD-EAKRSFAGDSCSDHIALLKAFDGYKDAKRNRRERDFCWENFLSPITLQMMEDMRSQF 866
+ + K A SDH+ ++ + + +K N ++ FC ++FL+ T++M++ R Q
Sbjct: 928 LQSKMKFEMAQQDLSDHLLYIRLCNEFC-SKNNSQQNQFCRDHFLNFSTMRMVQGTRRQL 986
Query: 867 LDLLSDIGFVDKSKGPSA--------YNRYSHDLEMVCAILCAGLYPNV-VQCKRKGKRA 917
L L ++ S +N++S M+ A++ AG YP + V +
Sbjct: 987 LRELVRAKLINISPNRDVLTVLTDHHFNQFSQCWPMIQAVIAAGCYPFIGVSASESNLKK 1046
Query: 918 VFYTKEVGQVALHPSSVNANQ 938
V T LHPSS+ Q
Sbjct: 1047 V-QTFNDKPAFLHPSSMVKKQ 1066
Score = 39 (18.8 bits), Expect = 1.1e-29, Sum P(2) = 1.1e-29
Identities = 13/60 (21%), Positives = 24/60 (40%)
Query: 597 TINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPS 656
T N + F P +K ++ +E S ++ V + C + S K ++PS
Sbjct: 1049 TFNDKPAFLHPSSMVKKQIVKMGKSEKSPRVEYVAFQEMCQMPSDRSLSM--KTVTVIPS 1106
Score = 37 (18.1 bits), Expect = 7.3e-49, Sum P(3) = 7.3e-49
Identities = 7/36 (19%), Positives = 22/36 (61%)
Query: 116 FDQNEWWGKLEQMKRGEEQEMIIKRKFSRADQQTLA 151
+++ +W ++E ++R E+ + K++ + + TL+
Sbjct: 394 YEEEDWKDEIEAVEREEKDKA--KQRAADSSLSTLS 427
>TAIR|locus:2095989 [details] [associations]
symbol:AT3G62310 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009560 "embryo sac egg
cell differentiation" evidence=RCA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005829 GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0005730 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 EMBL:AL162507 KO:K12820
ProtClustDB:CLSN2683587 OMA:TVLQIHA EMBL:AY120782 EMBL:BT010331
IPI:IPI00540868 PIR:T48023 RefSeq:NP_191790.1 UniGene:At.34140
UniGene:At.4777 ProteinModelPortal:Q9LZQ9 SMR:Q9LZQ9 IntAct:Q9LZQ9
PaxDb:Q9LZQ9 PRIDE:Q9LZQ9 EnsemblPlants:AT3G62310.1 GeneID:825404
KEGG:ath:AT3G62310 TAIR:At3g62310 InParanoid:Q9LZQ9
PhylomeDB:Q9LZQ9 ArrayExpress:Q9LZQ9 Genevestigator:Q9LZQ9
Uniprot:Q9LZQ9
Length = 726
Score = 579 (208.9 bits), Expect = 1.7e-84, Sum P(2) = 1.7e-84
Identities = 154/431 (35%), Positives = 237/431 (54%)
Query: 547 YICRHEGDGAILVFLTGWNDISKLLDQIKVNKF---LGDP-NKFLVLPLHGSMPTINQRE 602
++C GD ILVFLTG +I K+NK LGD V+PL+ ++P Q++
Sbjct: 270 HMCEPPGD--ILVFLTGEEEIEDACR--KINKEVGNLGDQVGPIKVVPLYSTLPPAMQQK 325
Query: 603 IFDRPP-------PNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLP 655
IFD P P RKIV++TNIAE+S+TID +VYV+D G AK+ Y+ ++ LL
Sbjct: 326 IFDPAPEPVTEGGPPGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRIRVESLLV 385
Query: 656 SWISKASAHQRRGRAGRVQPGVCYKLYP-RIIHDAMLPYQLPEILRTPLQELCLHIKSLQ 714
S ISKASAHQR GRAGR +PG C++LY + ++ + P PEILR+ L L +K L
Sbjct: 386 SPISKASAHQRSGRAGRTRPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLG 445
Query: 715 LGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGKMLL 774
+ + F + PP P + A+E+L +GALDD NLT G + P+DP + KML+
Sbjct: 446 IDDLVHF--DFMDPPAPETLMRALEVLNYLGALDDDGNLTKTGEIMSEFPLDPQMAKMLI 503
Query: 775 MGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYK 834
+ F C N L+++A L+ N F+ P QK DEAK F G DH+ LL + +K
Sbjct: 504 VSPEFNCSNEILSVSAMLSVPNCFIRPREAQKAADEAKARF-GHIEGDHLTLLNVYHAFK 562
Query: 835 DAKRNRRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYSHDLEM 894
+N + ++C+ENF++ ++ +++R Q + ++S S + +N + + +
Sbjct: 563 ---QNNEDPNWCYENFINNRAMKSADNVRQQLVRIMSRFNLKMCS---TDFNSRDYYINI 616
Query: 895 VCAILCAGLYPNVVQCKRKGKRAVFYTKEVGQVALHPSSVNANQNNFPLPYMVYSEMVKT 954
A+L AG + V +R G +V V LHPS+ ++ P +++Y+E V T
Sbjct: 617 RKAML-AGYFMQVAHLERTGHYLTVKDNQV--VHLHPSNCLDHK---P-EWVIYNEYVLT 669
Query: 955 NNINVYDSTNI 965
+ + T+I
Sbjct: 670 SRNFIRTVTDI 680
Score = 300 (110.7 bits), Expect = 1.7e-84, Sum P(2) = 1.7e-84
Identities = 71/201 (35%), Positives = 98/201 (48%)
Query: 274 MLSFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEE---ELSSLRGAD 330
+L R LP + K EFLK + NQ L++ GETG GKTTQ+PQF+++ E S R
Sbjct: 54 ILEKRRTLPVWLQKEEFLKTLNNNQTLILVGETGSGKTTQIPQFVIDAVDAETSDKR-RK 112
Query: 331 CNIICTQPXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQL 390
+ CTQP E +GE VGY IR E S +T L + T G+LLR+
Sbjct: 113 WLVGCTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSPRTVLKYLTDGMLLREA 172
Query: 391 VEDPDLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYFG 450
+ DP L +++DE HER + D MSAT+ A+ F YF
Sbjct: 173 MADPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQDYFS 232
Query: 451 NAPTVHIPGLTFPVTDLFLED 471
AP + +PG PV + ++
Sbjct: 233 GAPLMKVPGRLHPVEIFYTQE 253
>POMBASE|SPBC16H5.10c [details] [associations]
symbol:prp43 "ATP-dependent RNA helicase Prp43
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000390
"spliceosomal complex disassembly" evidence=ISO] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISO;ISS] [GO:0005524
"ATP binding" evidence=ISM] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005681 "spliceosomal complex" evidence=ISO] [GO:0006364 "rRNA
processing" evidence=ISS] [GO:0030686 "90S preribosome"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 PomBase:SPBC16H5.10c GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0005681 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 GO:GO:0000390 KO:K12820 OMA:TVLQIHA
EMBL:AB027819 PIR:T39615 RefSeq:NP_595937.1
ProteinModelPortal:O42945 IntAct:O42945 STRING:O42945
EnsemblFungi:SPBC16H5.10c.1 GeneID:2540057 KEGG:spo:SPBC16H5.10c
OrthoDB:EOG4S7NZ4 NextBio:20801194 Uniprot:O42945
Length = 735
Score = 538 (194.4 bits), Expect = 7.9e-84, Sum P(2) = 7.9e-84
Identities = 150/432 (34%), Positives = 219/432 (50%)
Query: 544 TIEYICRHEGDGAILVFLTGWNDISKLLDQI--KVNKFL--GDPNKFLVLPLHGSMPTIN 599
T+ I EG G ILVFLTG +I +I + + + G V PL+GS+P
Sbjct: 275 TVLQIHVEEGPGDILVFLTGEEEIEDACRKITLEADDLVREGAAGPLKVYPLYGSLPPNQ 334
Query: 600 QREIFDRPPPNK-----RKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLL 654
Q+ IF+ P + RK+V++TNIAE+S+TID +VYVVD G +K+ Y+ ++ LL
Sbjct: 335 QQRIFEPTPEDTKSGYGRKVVISTNIAETSLTIDGIVYVVDPGFSKQKIYNPRIRVESLL 394
Query: 655 PSWISKASAHQRRGRAGRVQPGVCYKLYPR-IIHDAMLPYQLPEILRTPLQELCLHIKSL 713
S ISKASA QR GRAGR +PG C++LY ++ PEILR+ L L +K L
Sbjct: 395 VSPISKASAQQRAGRAGRTRPGKCFRLYTEEAFRKELIEQTYPEILRSNLSSTVLELKKL 454
Query: 714 QLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGKML 773
+ + F + PP P + A+E L + LDD +LTPLGR P+DPN+ ML
Sbjct: 455 GIDDLVHF--DYMDPPAPETMMRALEELNYLNCLDDNGDLTPLGRKASEFPLDPNLAVML 512
Query: 774 LMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGY 833
+ F C N L++ A L+ N FV P + +K DE ++ F DH+ LL + Y
Sbjct: 513 IRSPEFYCSNEVLSLTALLSVPNVFVRPNSARKLADEMRQQFTHPD-GDHLTLLNVYHAY 571
Query: 834 KDAKRNRRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYSHDLE 893
K + D+CW +FLS L +++R Q L + V+ P Y ++
Sbjct: 572 KSGEGTA---DWCWNHFLSHRALISADNVRKQ-LRRTMERQEVELISTPFDDKNYYVNIR 627
Query: 894 MVCAILCAGLYPNVVQCKRKGKRAVFYTKEVGQVALHPSSVNANQNNFPLPYMVYSEMVK 953
L +G + V + GK V K+ V+LHPS + P ++VY+E V
Sbjct: 628 RA---LVSGFFMQVAKKSANGKNYVTM-KDNQVVSLHPS---CGLSVTP-EWVVYNEFVL 679
Query: 954 TNNINVYDSTNI 965
T + + T I
Sbjct: 680 TTKSFIRNVTAI 691
Score = 350 (128.3 bits), Expect = 7.9e-84, Sum P(2) = 7.9e-84
Identities = 88/252 (34%), Positives = 129/252 (51%)
Query: 220 DSGIESSEVARRPKLSVKVANTISPPQSDSAKERLNVILKERQEKLKSSDSGKAMLSFRE 279
++G +S EV L+ + A T++ Q+ A+E N ++ S + +L R
Sbjct: 21 NNGDDSEEVVSSKGLTRR-ATTVA--QAAKAEEGPNNFFNDKP----FSQNYFKILETRR 73
Query: 280 KLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQPX 339
+LP ++ + EFLK ENQ++V GETG GKTTQ+PQF+L +EL L + I CTQP
Sbjct: 74 ELPVYQQREEFLKIYHENQIIVFVGETGSGKTTQIPQFVLYDELPHL--TNTQIACTQPR 131
Query: 340 XXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVEDPDLSCV 399
E +LGE VGY IR E T L + T G+LLR+ + D LS
Sbjct: 132 RVAAMSVAKRVADEMDVDLGEEVGYNIRFEDCSGPNTLLKYMTDGMLLREAMTDHMLSRY 191
Query: 400 SHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGNAPTVHIPG 459
S +++DE HER + D MSAT++A F KYF +AP + +PG
Sbjct: 192 SCIILDEAHERTLATDILMGLMKRLATRRPDLKIIVMSATLDAKKFQKYFFDAPLLAVPG 251
Query: 460 LTFPVTDLFLED 471
T+PV + ++
Sbjct: 252 RTYPVEIYYTQE 263
>UNIPROTKB|J3KR71 [details] [associations]
symbol:DHX34 "Probable ATP-dependent RNA helicase DHX34"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AC008754 HGNC:HGNC:16719
ChiTaRS:DHX34 ProteinModelPortal:J3KR71 Ensembl:ENST00000466298
Uniprot:J3KR71
Length = 576
Score = 494 (179.0 bits), Expect = 1.7e-82, Sum P(3) = 1.7e-82
Identities = 105/222 (47%), Positives = 137/222 (61%)
Query: 603 IFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKAS 662
+FD PP RK +L+TNIAE+S+TID + +VVD GK KE SYD KL L WIS+AS
Sbjct: 340 VFDVAPPGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQAS 399
Query: 663 AHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQLPEILRTPLQELCLHIKSLQLGTVGSFL 722
A QR+GRAGR PGVC++LY +DA PY +PEI R L L L +KS+ +G +F
Sbjct: 400 AEQRKGRAGRTGPGVCFRLYAESDYDAFAPYPVPEIRRVALDSLVLQMKSMSVGDPRTF- 458
Query: 723 SKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGKMLLMGAIFQCL 782
++PP P +++ AI L+ GALD E LTP+G L LPVD IGKML++G++F +
Sbjct: 459 -PFIEPPPPASLETAILYLRDQGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFSLV 517
Query: 783 NPALTIAAALAHRNPFVLPVNMQKEV-DEAKRSFAGDSCSDH 823
P LTIAAAL+ ++PF E S A C H
Sbjct: 518 EPVLTIAAALSVQSPFTRSAQSSPECCTPPASSLAAPRCCTH 559
Score = 354 (129.7 bits), Expect = 1.7e-82, Sum P(3) = 1.7e-82
Identities = 77/188 (40%), Positives = 102/188 (54%)
Query: 278 REKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQ 337
R LP + L+ + E+QV+VV+G+TGCGK+TQ+PQ++L S ++ CTQ
Sbjct: 159 RAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFS-------HVACTQ 211
Query: 338 PXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVEDPDLS 397
P E G VGYQIR ES RSA T+++F T G+LLRQ+ +P L
Sbjct: 212 PRRIACISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLRQIQREPSLP 271
Query: 398 CVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGNAPTVHI 457
L+VDE+HER ++ DF MSATIN LFS YF NAP V +
Sbjct: 272 QYEVLIVDEVHERHLHNDFLLGVLQRLLPTRPDLKVILMSATINISLFSSYFSNAPVVQV 331
Query: 458 PGLTFPVT 465
PG FP+T
Sbjct: 332 PGRLFPIT 339
Score = 38 (18.4 bits), Expect = 1.7e-82, Sum P(3) = 1.7e-82
Identities = 16/59 (27%), Positives = 28/59 (47%)
Query: 99 PVWRAERLRQQAAEMEVFDQNEWWGKLEQMKRGEEQEMIIKRKFSRADQQTLADMAHQL 157
P R R+ F Q + +G+L +++R E + I + +R QTL + HQ+
Sbjct: 126 PAERVAEFRRALLHYLDFGQKQAFGRLAKLQR-ERAALPIAQYGNRI-LQTLKE--HQV 180
>CGD|CAL0000153 [details] [associations]
symbol:orf19.1687 species:5476 "Candida albicans" [GO:0030686
"90S preribosome" evidence=IEA] [GO:0071014 "post-mRNA release
spliceosomal complex" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000390 "spliceosomal complex disassembly" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0000153 GO:GO:0005524 GO:GO:0003676 EMBL:AACQ01000014
EMBL:AACQ01000013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12820 RefSeq:XP_721644.1
RefSeq:XP_721764.1 STRING:Q5AJA5 GeneID:3636669 GeneID:3636709
KEGG:cal:CaO19.1687 KEGG:cal:CaO19.9255 Uniprot:Q5AJA5
Length = 767
Score = 547 (197.6 bits), Expect = 1.8e-82, Sum P(2) = 1.8e-82
Identities = 144/427 (33%), Positives = 227/427 (53%)
Query: 544 TIEYICRHEGDGAILVFLTGWNDISKLLDQIKV--NKFLGDPN--KFLVLPLHGSMPTIN 599
T+ I EG+G IL+FLTG +I +I + ++ + + N V PL+GS+P
Sbjct: 294 TVLQIHATEGEGDILLFLTGEEEIEDACRKISLEGDELVREQNCGPLKVYPLYGSLPPHQ 353
Query: 600 QREIFDRPP--PNK-----RKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLAC 652
Q++IF+ P PN RK++++TNIAE+S+TID +VYVVD G +K+ Y+ ++
Sbjct: 354 QQKIFEPAPTNPNPNGRPGRKVIISTNIAETSLTIDGIVYVVDPGFSKQKVYNPRVRVES 413
Query: 653 LLPSWISKASAHQRRGRAGRVQPGVCYKLYPR-IIHDAMLPYQLPEILRTPLQELCLHIK 711
LL S ISKASA QR GRAGR +PG C++LY ++ PEILR+ L L +K
Sbjct: 414 LLVSPISKASAQQRAGRAGRTRPGKCFRLYTEEAFKKELIEQSYPEILRSNLSSTVLELK 473
Query: 712 SLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGK 771
L + + F + PP P + A+E L + L D +LT LGR P+DP +
Sbjct: 474 KLGIDDLVHF--DFMDPPAPETMMRALEELNYLQCLSDEGDLTALGRLASQFPLDPMLAV 531
Query: 772 MLLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFD 831
ML+ + C LTI A L+ N FV P + +K DEAK SFA + DH+ L+ ++
Sbjct: 532 MLIGSPAYSCSEEILTIVAMLSVPNVFVRPASARKRADEAKLSFA-QADGDHLTLINVYE 590
Query: 832 GYKDAKRNR-RERDFCWENFLSPITLQMMEDMRSQFLDLLS--DIGFVDKSKGPSAYNRY 888
+ + + +C +NFLS +L +++R+Q L+ D+ + + S + +
Sbjct: 591 AFISPEASEIGTHKWCRDNFLSYRSLTSAKNVRNQLQRLMQKYDLQLISQYNQVSEFEYW 650
Query: 889 SHDLEMVCAILCAGLYPNVVQCKRKGKRAVFYTKEVGQVALHPSSVNANQNNFPLPYMVY 948
E V L AG + V + K+ G + K+ V +HPS+V + + +++Y
Sbjct: 651 ----ENVKKALVAGFFMQVAK-KKSGNKGYLTVKDNQDVLIHPSTVLSKEGE----WLIY 701
Query: 949 SEMVKTN 955
+E V T+
Sbjct: 702 NEFVLTS 708
Score = 341 (125.1 bits), Expect = 1.8e-82, Sum P(2) = 1.8e-82
Identities = 78/205 (38%), Positives = 104/205 (50%)
Query: 274 MLSFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNI 333
+L R LP + EFLK Q++V GETG GKTTQ+PQF+L +E+ L G +
Sbjct: 87 ILKTRRDLPVHAQREEFLKIFHSTQIMVFVGETGSGKTTQIPQFVLYDEMPHLTGKQ--V 144
Query: 334 ICTQPXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVED 393
CTQP E LGE VGY IR E+ +T L + T G+LLR+ +ED
Sbjct: 145 ACTQPRRVAAMSVAARVADEMDVELGEEVGYNIRFENNSGPKTILKYMTDGMLLREAMED 204
Query: 394 PDLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGNAP 453
DL+ S +++DE HER + D MSAT++A+ F YF NAP
Sbjct: 205 HDLTRYSCIILDEAHERTLATDILMGLLKQVSVRRPDLKIIIMSATLDAEKFQNYFNNAP 264
Query: 454 TVHIPGLTFPV----TDLFLEDVLE 474
+ +PG T PV T F D L+
Sbjct: 265 LLAVPGRTHPVEIYYTPEFQRDYLD 289
>SGD|S000003088 [details] [associations]
symbol:PRP43 "RNA helicase in the DEAH-box family"
species:4932 "Saccharomyces cerevisiae" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=IMP;IDA] [GO:0000390 "spliceosomal
complex disassembly" evidence=IGI;IDA] [GO:0030490 "maturation of
SSU-rRNA" evidence=IGI] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0030686 "90S preribosome" evidence=IDA] [GO:0071014 "post-mRNA
release spliceosomal complex" evidence=IMP] [GO:0006364 "rRNA
processing" evidence=IMP] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0042273 "ribosomal large subunit biogenesis" evidence=IMP]
[GO:0000462 "maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 SGD:S000003088
GO:GO:0005739 GO:GO:0005524 EMBL:BK006941 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0000463
GO:GO:0004004 HOGENOM:HOG000175261 GO:GO:0000390 GO:GO:0000466
GO:GO:0000462 KO:K12820 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
OrthoDB:EOG4S7NZ4 GO:GO:0071014 EMBL:U41851 EMBL:Z72642 PIR:S64130
RefSeq:NP_011395.1 PDB:2XAU PDB:3KX2 PDBsum:2XAU PDBsum:3KX2
ProteinModelPortal:P53131 SMR:P53131 DIP:DIP-5152N IntAct:P53131
MINT:MINT-497996 STRING:P53131 PaxDb:P53131 PeptideAtlas:P53131
PRIDE:P53131 EnsemblFungi:YGL120C GeneID:852757 KEGG:sce:YGL120C
CYGD:YGL120c EvolutionaryTrace:P53131 NextBio:972201
Genevestigator:P53131 GermOnline:YGL120C Uniprot:P53131
Length = 767
Score = 531 (192.0 bits), Expect = 9.5e-82, Sum P(2) = 9.5e-82
Identities = 143/433 (33%), Positives = 223/433 (51%)
Query: 544 TIEYICRHEGDGAILVFLTGWNDISKLLDQIKV--NKFLGDPN--KFLVLPLHGSMPTIN 599
T+ I E G IL+FLTG ++I + +I + ++ + + V PL+GS+P
Sbjct: 293 TVLQIHATEEAGDILLFLTGEDEIEDAVRKISLEGDQLVREEGCGPLSVYPLYGSLPPHQ 352
Query: 600 QREIFDRPPPNK-----RKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLL 654
Q+ IF+ P + RK+V++TNIAE+S+TID +VYVVD G +K+ Y+ ++ LL
Sbjct: 353 QQRIFEPAPESHNGRPGRKVVISTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLL 412
Query: 655 PSWISKASAHQRRGRAGRVQPGVCYKLYPR-IIHDAMLPYQLPEILRTPLQELCLHIKSL 713
S ISKASA QR GRAGR +PG C++LY ++ PEILR+ L L +K L
Sbjct: 413 VSPISKASAQQRAGRAGRTRPGKCFRLYTEEAFQKELIEQSYPEILRSNLSSTVLELKKL 472
Query: 714 QLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGKML 773
+ + F + PP P + A+E L + LDD NLTPLGR P+DP + ML
Sbjct: 473 GIDDLVHF--DFMDPPAPETMMRALEELNYLACLDDEGNLTPLGRLASQFPLDPMLAVML 530
Query: 774 LMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGY 833
+ FQC LTI A L+ N F+ P +K D+AK FA DHI LL + +
Sbjct: 531 IGSFEFQCSQEILTIVAMLSVPNVFIRPTKDKKRADDAKNIFAHPD-GDHITLLNVYHAF 589
Query: 834 K-DAKRNRRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYSHDL 892
K D +C +++L+ +L +++RSQ L++ + Y +
Sbjct: 590 KSDEAYEYGIHKWCRDHYLNYRSLSAADNIRSQLERLMNRYNL---ELNTTDYESPKY-F 645
Query: 893 EMVCAILCAGLYPNVVQCKRKGKRAVFYTKEVGQVALHPSSVNANQNNFPLPYMVYSEMV 952
+ + L +G + V + KR G + K+ V +HPS+V + +++Y+E V
Sbjct: 646 DNIRKALASGFFMQVAK-KRSGAKGYITVKDNQDVLIHPSTVLGHDAE----WVIYNEFV 700
Query: 953 KTNNINVYDSTNI 965
T+ + T++
Sbjct: 701 LTSKNYIRTVTSV 713
Score = 356 (130.4 bits), Expect = 9.5e-82, Sum P(2) = 9.5e-82
Identities = 80/205 (39%), Positives = 109/205 (53%)
Query: 274 MLSFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNI 333
+L R +LP + EFLK NQ++V GETG GKTTQ+PQF+L +E+ L +
Sbjct: 86 ILKIRRELPVHAQRDEFLKLYQNNQIMVFVGETGSGKTTQIPQFVLFDEMPHLENTQ--V 143
Query: 334 ICTQPXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVED 393
CTQP E LGE VGY IR E+K S +T L + T G+LLR+ +ED
Sbjct: 144 ACTQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLLREAMED 203
Query: 394 PDLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGNAP 453
DLS S +++DE HER + D MSAT++A+ F +YF +AP
Sbjct: 204 HDLSRYSCIILDEAHERTLATDILMGLLKQVVKRRPDLKIIIMSATLDAEKFQRYFNDAP 263
Query: 454 TVHIPGLTFPV----TDLFLEDVLE 474
+ +PG T+PV T F D L+
Sbjct: 264 LLAVPGRTYPVELYYTPEFQRDYLD 288
>FB|FBgn0030833 [details] [associations]
symbol:CG8915 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS51061 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:AE014298 GO:GO:0006200
GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00680000101018 FlyBase:FBgn0030833 EMBL:BT133099
RefSeq:NP_573208.1 SMR:Q9VX63 IntAct:Q9VX63 MINT:MINT-762262
EnsemblMetazoa:FBtr0074447 GeneID:32715 KEGG:dme:Dmel_CG8915
UCSC:CG8915-RA InParanoid:Q9VX63 OMA:WISQADA GenomeRNAi:32715
NextBio:779983 Uniprot:Q9VX63
Length = 976
Score = 562 (202.9 bits), Expect = 1.2e-81, Sum P(2) = 1.2e-81
Identities = 150/463 (32%), Positives = 249/463 (53%)
Query: 536 IDLGLVESTIEYICRHEGD-GAILVFLTGWNDISKLLDQIKVNKFLGDPNKFLVLPLHGS 594
ID L+ S +E + R +GD GA++V+L G++D++ LL +++ + + ++ LH
Sbjct: 442 IDNDLIVSLLELLLR-QGDAGAVIVYLPGYSDMTSLLARLESSL---PREQITIILLHSQ 497
Query: 595 MPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLL 654
+ QR++F P + KI+L+TNI ++SITI D++YV+D G AK +YD+ + L
Sbjct: 498 VDNSEQRKVFRTYPGVRLKIILSTNIGQTSITIPDLLYVIDTGLAKMKTYDSTIDASQLT 557
Query: 655 PSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQLPEILRTPLQELCLHIK-SL 713
+WIS+A A QR GRAGRV G CY+LY M Y +PEI+R L E+CL K +
Sbjct: 558 LTWISQADAKQRAGRAGRVCHGNCYRLYDNDRMARMNLYTIPEIMRRTLDEICLLTKLAA 617
Query: 714 QLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGKML 773
+ +FL+ AL P AV + LK +G LD+ + +TPLG + LP+ IGK L
Sbjct: 618 PDKKIENFLALALDTPPKDAVMQSCSRLKLLGVLDERDEVTPLGHIVAELPLGVQIGKCL 677
Query: 774 LMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDE--AKRSFAGDSCSDHIALLKAFD 831
+ +CL+ + IAA + R+PFVL + K+ + ++ FAGD SD +A++K ++
Sbjct: 678 VYSIYLRCLDSMIIIAAYHSVRDPFVLNIERGKKSGQQISRVLFAGDGMSDSLAVIKLYE 737
Query: 832 GYKDAKRNRRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYSHD 891
+ + KR + DFC NF+ ++M S D + I ++ A + +++D
Sbjct: 738 EFTNLKR-KDIGDFCERNFICRNAMEMFVSAASTLRDTVYRIFRFSEASARLA-SSFNND 795
Query: 892 LEMVCAILCAGLYPNVVQCKRKGKRAVFYTKE-VGQVALHPSSVNAN--QNNFPLPYMVY 948
M+ L AGLYP + R+ K + + + QV+ S + Q + ++++
Sbjct: 796 TNMIRLALTAGLYPKLAYMDRENKNQLVAEGDPLVQVS-RSSCLRGKKKQKDLASEWILF 854
Query: 949 SEMVKT-NNINVYDSTN-ISEYALLLFGGNLIPSKTGEGIEML 989
E +T + I+ + T +S + L GG ++ G EML
Sbjct: 855 VEKTRTADQISSLEHTTLVSGLMVALAGGKRFITEA-HGSEML 896
Score = 335 (123.0 bits), Expect = 1.2e-81, Sum P(2) = 1.2e-81
Identities = 76/214 (35%), Positives = 110/214 (51%)
Query: 278 REKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQ 337
R LP +K + L + +QVL++ G TG GK+TQLPQ+ILE ++ A I+ +Q
Sbjct: 206 RRSLPIYKQRESILNVLQRDQVLIIKGATGSGKSTQLPQYILE--WAAEHRAPVRIVVSQ 263
Query: 338 PXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVEDPD-- 395
P ERGE G TVGY IR+ + S+ T L+ T+G LLR L D
Sbjct: 264 PRRIAAISVSERISKERGEAPGTTVGYNIRMNRQCSSNTVLMLTTSGCLLRALAMDKKSF 323
Query: 396 LSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGNAPTV 455
+HL++DE HER ++ DF MSAT++ + S YFG +
Sbjct: 324 FKNTTHLIIDEAHERDLDTDFLLLATKLELQKNPHLRLVLMSATMDLEALSNYFGGGTVM 383
Query: 456 HIPGLTFPVTDLFLEDVLEKTRYKMNSKLDSFQG 489
+ G +F V+ LED+L KT Y M+ +++ F G
Sbjct: 384 DVEGRSFEVSIYHLEDILSKTGY-MHPRMEKFLG 416
>POMBASE|SPAC10F6.02c [details] [associations]
symbol:prp22 "ATP-dependent RNA helicase Prp22"
species:4896 "Schizosaccharomyces pombe" [GO:0000390 "spliceosomal
complex disassembly" evidence=ISS] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005681 "spliceosomal complex"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
PomBase:SPAC10F6.02c GO:GO:0005524 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0005681 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GO:GO:0000390 KO:K12818
OMA:NAWCYEN PIR:T37496 RefSeq:NP_593253.1 ProteinModelPortal:O42643
IntAct:O42643 STRING:O42643 PRIDE:O42643
EnsemblFungi:SPAC10F6.02c.1 GeneID:2542978 KEGG:spo:SPAC10F6.02c
OrthoDB:EOG45TGW9 NextBio:20804011 Uniprot:O42643
Length = 1168
Score = 545 (196.9 bits), Expect = 2.0e-80, Sum P(2) = 2.0e-80
Identities = 139/406 (34%), Positives = 217/406 (53%)
Query: 533 AEQIDLGLVESTIEYICRHEGDGAILVFLTGWNDISKLLDQI-KVNKFLGDP-NKFLVLP 590
A+ +D L+ T+ I EG G ILVFLTG +I + + + +K LGD + ++LP
Sbjct: 700 ADYLDAALM--TVMQIHLSEGPGDILVFLTGQEEIDTSCEILYERSKMLGDSIPELVILP 757
Query: 591 LHGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKL 650
++ ++P+ Q IF+ PP RK+V+ATNIAE+S+TID + YVVD G K++ +D +
Sbjct: 758 VYSALPSEIQSRIFEPAPPGGRKVVIATNIAETSLTIDGIYYVVDPGFVKQSCFDPKLGM 817
Query: 651 ACLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIH-DAMLPYQLPEILRTPLQELCLH 709
L+ + IS+A A QR GRAGR PG CY+LY + + MLP +PEI R L L
Sbjct: 818 DSLIVTPISQAQARQRSGRAGRTGPGKCYRLYTESAYRNEMLPSPIPEIQRQNLSHTILM 877
Query: 710 IKSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNI 769
+K++ + + +F + PP + A++ L + ALDD LTPLGR + P++P +
Sbjct: 878 LKAMGINDLLNF--DFMDPPPAQTMIAALQNLYALSALDDEGLLTPLGRKMADFPMEPQL 935
Query: 770 GKMLLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKA 829
K+L+ C L+I A L+ N + P Q+E D + FA SDH+ LL
Sbjct: 936 SKVLITSVELGCSEEMLSIIAMLSVPNIWSRPREKQQEADRQRAQFANPE-SDHLTLLNV 994
Query: 830 FDGYKDAKRNRRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYS 889
+ +K NR ++C+E+++ ++ ED+R Q + L+ D+ + P
Sbjct: 995 YTTWK---MNRCSDNWCYEHYIQARGMRRAEDVRKQLIRLM------DRYRHPVV--SCG 1043
Query: 890 HDLEMVCAILCAGLYPNVVQCKRKGKRAVFYT-KEVGQVALHPSSV 934
E++ LC+G + NV KR + T E V +HPS V
Sbjct: 1044 RKRELILRALCSGYFTNVA--KRDSHEGCYKTIVENAPVYMHPSGV 1087
Score = 347 (127.2 bits), Expect = 2.0e-80, Sum P(2) = 2.0e-80
Identities = 94/278 (33%), Positives = 142/278 (51%)
Query: 206 GNLLNSSQGNVPVNDSGIESSEVARRPKLSVKVANTISPPQS--------DSAKERLNVI 257
G +L + + + ++ ++S + + LS+ +T+S PQ DSA +L
Sbjct: 421 GQILANDRREIRQKEAKLKSEQEMEKQDLSLSWQDTMSNPQDRKFAQDVRDSAARQLTSE 480
Query: 258 LKE-RQEKLKSSDS-GK----AMLSFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKT 311
RQ ++ S GK +M RE LP FK++ +FL+AV++NQ+LV+ GETG GKT
Sbjct: 481 TPSWRQATRNANISYGKRTTLSMKEQREGLPVFKLRKQFLEAVSKNQILVLLGETGSGKT 540
Query: 312 TQLPQFILEEELSSLRGADCNII-CTQPXXXXXXXXXXXXXXERGENLGETVGYQIRLES 370
TQ+ Q++ EE +S D +I CTQP E G +GE VGY IR E
Sbjct: 541 TQITQYLAEEGYTS----DSKMIGCTQPRRVAAMSVAKRVAEEVGCRVGEEVGYTIRFED 596
Query: 371 KRSAQTRLLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXX 430
K S T++ + T G+L R+ + DP LS S +++DE HER + D
Sbjct: 597 KTSRMTQIKYMTDGMLQRECLVDPLLSKYSVIILDEAHERTVATDVLFGLLKGTVLKRPD 656
Query: 431 XXXXXMSATINADLFSKYFGNAPTVHIPGLTFPVTDLF 468
SAT++A+ FS YF P IPG ++PV ++
Sbjct: 657 LKLIVTSATLDAERFSSYFYKCPIFTIPGRSYPVEIMY 694
Score = 41 (19.5 bits), Expect = 3.3e-48, Sum P(2) = 3.3e-48
Identities = 10/42 (23%), Positives = 18/42 (42%)
Query: 480 MNSKLDSFQGNXXXXXXQDSKKDHLTALFEDVDIDSNYKNYR 521
+N+ +S G +D K H +F + I ++ N R
Sbjct: 85 VNNGSNSVNGASHDLDSKDVDKQHQRKMFPGLSIPNSTNNLR 126
>FB|FBgn0033160 [details] [associations]
symbol:CG11107 species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC;ISS] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AE013599
GO:GO:0005524 GO:GO:0022008 GO:GO:0003676 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0016779 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA EMBL:AY058484 RefSeq:NP_610269.1 UniGene:Dm.4189
SMR:Q7K3M5 STRING:Q7K3M5 EnsemblMetazoa:FBtr0088966 GeneID:35654
KEGG:dme:Dmel_CG11107 UCSC:CG11107-RA FlyBase:FBgn0033160
InParanoid:Q7K3M5 OrthoDB:EOG4D254T GenomeRNAi:35654 NextBio:794560
Uniprot:Q7K3M5
Length = 729
Score = 536 (193.7 bits), Expect = 7.3e-80, Sum P(2) = 7.3e-80
Identities = 143/435 (32%), Positives = 231/435 (53%)
Query: 541 VESTIE-YICRHEGDGAILVFLTGWNDISKLLDQIK--VNKFLGDPNKFLVLPLHGSMPT 597
+ + I+ ++C E +G IL+FLTG +I + +IK ++ + + +PL+ ++P
Sbjct: 269 IRTVIQIHMCE-EIEGDILMFLTGQEEIEEACKRIKREIDNLGSEIGELKCIPLYSTLPP 327
Query: 598 INQREIFD-RPPPNK-----RKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLA 651
Q+ IF+ PPPN RK+V++TNIAE+S+TID VV+V+D G AK+ Y+ ++
Sbjct: 328 NLQQRIFEPAPPPNANGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVE 387
Query: 652 CLLPSWISKASAHQRRGRAGRVQPGVCYKLYP-RIIHDAMLPYQLPEILRTPLQELCLHI 710
LL S ISKASA QR GRAGR +PG C++LY + + M PEILR+ L + L +
Sbjct: 388 SLLVSPISKASAQQRSGRAGRTRPGKCFRLYTEKAFKNEMQDNTYPEILRSNLGTVVLQL 447
Query: 711 KSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIG 770
K L + + F + PP P + A+ELL + ALDD NLT LG + P+DP +
Sbjct: 448 KKLGIDDLVHF--DFMDPPAPETLMRALELLNYLAALDDDGNLTDLGAVMSEFPLDPQLA 505
Query: 771 KMLLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAF 830
KML+ C N L+I A L+ FV P +K DEAK FA DH+ LL +
Sbjct: 506 KMLIASCQHNCSNEILSITAMLSVPQCFVRPNEAKKAADEAKMRFAHID-GDHLTLLNVY 564
Query: 831 DGYKDAKRNRRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYSH 890
+K + + ++C+ENF++ +L+ +++R Q ++ S ++ + Y +
Sbjct: 565 HAFKQSSE---DPNWCYENFINFRSLKSADNVRQQLARIMDRFNLRRTSTEFTSKDYYVN 621
Query: 891 DLEMVCAILCAGLYPNVVQCKRKGKRAVFYTKEVGQVALHPSSVNANQNNFPLPYMVYSE 950
+ L G + V +R G K+ V LHPS+ ++ + +++Y+E
Sbjct: 622 ----IRKALVQGFFMQVAHLERTGYYLTI--KDNQNVQLHPSTCLDHKPD----WVIYNE 671
Query: 951 MVKTNNINVYDSTNI 965
V T + T++
Sbjct: 672 FVLTTKNYIRTVTDV 686
Score = 307 (113.1 bits), Expect = 7.3e-80, Sum P(2) = 7.3e-80
Identities = 70/191 (36%), Positives = 102/191 (53%)
Query: 278 REKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQ 337
R LP F+ +A+F++ ++ +Q +V+ GETG GKTTQ+PQ+ ++ +S R + CTQ
Sbjct: 69 RIALPVFEYQADFMRLLSLHQCIVLVGETGSGKTTQIPQWCVDFAVSKGRKG---VSCTQ 125
Query: 338 PXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVEDPDLS 397
P E LGE VGY IR E +A+T L + T G+LLR+ + DP L
Sbjct: 126 PRRVAAMSVAQRVSEEMDVKLGEEVGYSIRFEDCSTAKTLLKYMTDGMLLREAMSDPMLD 185
Query: 398 CVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGNAPTVHI 457
+L+DE HER + D MSAT++A F +YF NAP + +
Sbjct: 186 QYQVILLDEAHERTLATDILMGVLKEVIRQRSDLKLVVMSATLDAGKFQQYFDNAPLMKV 245
Query: 458 PGLTFPVTDLF 468
PG T PV ++F
Sbjct: 246 PGRTHPV-EIF 255
>CGD|CAL0004768 [details] [associations]
symbol:PRP22 species:5476 "Candida albicans" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IEA] [GO:0071021
"U2-type post-spliceosomal complex" evidence=IEA] [GO:0000350
"generation of catalytic spliceosome for second transesterification
step" evidence=IEA] [GO:0000390 "spliceosomal complex disassembly"
evidence=IEA] [GO:0000386 "second spliceosomal transesterification
activity" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0004768 GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AACQ01000012 InterPro:IPR022967 SMART:SM00316
KO:K12818 EMBL:AACQ01000011 RefSeq:XP_721941.1 RefSeq:XP_722102.1
ProteinModelPortal:Q5AJY8 STRING:Q5AJY8 GeneID:3636272
GeneID:3636404 KEGG:cal:CaO19.11516 KEGG:cal:CaO19.4033
Uniprot:Q5AJY8
Length = 996
Score = 532 (192.3 bits), Expect = 1.2e-78, Sum P(2) = 1.2e-78
Identities = 137/396 (34%), Positives = 208/396 (52%)
Query: 541 VESTIEYICRHEGDGAILVFLTGWNDISKLLDQIKVN-KFLGDP-NKFLVLPLHGSMPTI 598
+ES I+ I E G ILVFLTG +I + + K LG+ + ++LP++ ++P+
Sbjct: 536 LESVIQ-IHVSEPAGDILVFLTGQEEIETSCEALHERMKLLGENIPELIILPVYSALPSE 594
Query: 599 NQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWI 658
Q IF+ PP RK++LATNIAE+SITID + YVVD G K YD+ + L + I
Sbjct: 595 MQTRIFEPTPPGSRKVILATNIAETSITIDGIYYVVDPGFVKINMYDSKLGMDSLRVTPI 654
Query: 659 SKASAHQRRGRAGRVQPGVCYKLYPRIIHDA-MLPYQLPEILRTPLQELCLHIKSLQLGT 717
SKA A+QR GRAGR PG CY+LY ++ M+P +PEI R L L +K++ +
Sbjct: 655 SKAQANQRSGRAGRTGPGKCYRLYTEQAYEKEMIPNTIPEIQRQNLSHTILMLKAMGIHD 714
Query: 718 VGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGKMLLMGA 777
+ +F + + PP + A+E L + ALDD NLT LGR + LP++P + K L+
Sbjct: 715 LVNF--EFMDPPSTTTMLTALEDLYILDALDDDGNLTTLGRKMADLPMEPALAKTLIQSV 772
Query: 778 IFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAK 837
++C L+I A L+ + F P + Q D+ K F S DH+ LL F +
Sbjct: 773 EYECTEEILSIVAMLSVQTIFYRPKDKQALADQRKSRFH-HSLGDHLTLLNVFQSWC--- 828
Query: 838 RNRRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYSHDLEMVCA 897
RN + +C +NF+ +++ ++R Q ++ G+ S G +D++ V
Sbjct: 829 RNNYSKTWCRDNFIQERSMRRAMEVRKQLKSIMQRFGYKTMSCG--------NDVDRVRR 880
Query: 898 ILCAGLYPNVVQCKRKGKRAVFYTKEVGQVALHPSS 933
C+G + N KR+ E V LHPSS
Sbjct: 881 TFCSGYFKN--SAKRQEGEGYKTLNENTLVYLHPSS 914
Score = 340 (124.7 bits), Expect = 1.2e-78, Sum P(2) = 1.2e-78
Identities = 80/246 (32%), Positives = 126/246 (51%)
Query: 227 EVARRPKLSVKVANTISPPQSDSAKERLNVILKERQEKLKSSDSGK-AMLSFREK---LP 282
E + +LS + T P ++ + + ++ K+ GK L +E+ LP
Sbjct: 278 EEKMQSELSDPLFQTSEPVKNSDLDPDTESFISKWKKSNKTETFGKRTSLPIQEQRRMLP 337
Query: 283 AFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQPXXXX 342
+ M+++ L+A+ +NQ +V+ GETG GKTTQ+ Q+I EE ++ + G I CTQP
Sbjct: 338 VYAMRSQLLEAIRDNQFVVIVGETGSGKTTQIVQYIYEEGMNKVGGQTKLIGCTQPRRVA 397
Query: 343 XXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVEDPDLSCVSHL 402
E G LG+TVGY IR E S T + + T G+L R+ + DP+++ S +
Sbjct: 398 AESVAKRVSEEVGCKLGDTVGYTIRFEDVTSENTVIKYMTDGMLEREALNDPNMNRYSVI 457
Query: 403 LVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGNAPTVHIPGLTF 462
++DE HER + D SAT++++ FS+YF N P + IPG TF
Sbjct: 458 MLDEAHERTIATDVLFALLKNAAKQNPNLKVIVTSATLDSNKFSRYFNNCPIITIPGRTF 517
Query: 463 PVTDLF 468
PV L+
Sbjct: 518 PVEVLY 523
>ASPGD|ASPL0000014477 [details] [associations]
symbol:AN4032 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 EMBL:BN001302
EMBL:AACD01000065 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12815 OMA:PSRSTWE OrthoDB:EOG4GQTD2
RefSeq:XP_661636.1 EnsemblFungi:CADANIAT00004650 GeneID:2873454
KEGG:ani:AN4032.2 Uniprot:Q5B5Z8
Length = 924
Score = 533 (192.7 bits), Expect = 1.3e-78, Sum P(2) = 1.3e-78
Identities = 144/441 (32%), Positives = 228/441 (51%)
Query: 541 VESTIEYICR-H--EGDGAILVFLTGWNDISKLLDQIKVN-KFLGDPNKFLVLPLHGSMP 596
V+S ++ + H +G G ILVF+TG DI + + K L DP K +LP++ MP
Sbjct: 380 VDSAVKQVLAIHVSQGPGDILVFMTGQEDIEATCELVDERLKLLNDPPKLSILPIYSQMP 439
Query: 597 TINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPS 656
Q +IF+R P RK+++ATNIAE+S+T+D +++VVD G +K Y+ + L +
Sbjct: 440 AEQQAKIFERAAPGVRKVIVATNIAETSLTVDGIMFVVDSGYSKLKVYNPKMGMDTLQIT 499
Query: 657 WISKASAHQRRGRAGRVQPGVCYKLYPRIIH-DAMLPYQLPEILRTPLQELCLHIKSLQL 715
IS+A+A+QR GRAGR PG Y+LY + + + M +PEI RT L L +KSL +
Sbjct: 500 PISQANANQRSGRAGRTGPGKAYRLYTEVAYKNEMYLQTIPEIQRTSLSNTVLLLKSLGV 559
Query: 716 GTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGKMLLM 775
+ F + PP + ++ L ++GALD++ +LT LGR + P+DP + K+++
Sbjct: 560 KDLLDF--DFMDPPPQETISTSLFELWSLGALDNLGDLTHLGRQMTPFPMDPPLAKLIIT 617
Query: 776 GAI-FQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYK 834
A + C LTI + L+ N F P Q+E D A+ F SDH+ LL + +K
Sbjct: 618 AAEQYGCSEEMLTIVSMLSVPNVFYRPKERQEESDAAREKFFVPE-SDHLTLLHVYTQWK 676
Query: 835 DAKRNRRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYSHDLEM 894
N +C ++FL TL+ +++R Q L+DI + K S D +
Sbjct: 677 S---NGYSDHWCTKHFLHAKTLRRAKEVRDQ----LNDIMVMQKLPLISC----GTDWDE 725
Query: 895 VCAILCAGLYPNVVQCKRKGKRAVFYTKEVGQVALHPSSVNANQNNFPLPYMVYSEMVKT 954
+ +C+G Y + K G+ T +ALHP+S P Y+VY E++ T
Sbjct: 726 IRKCICSGFYHQAARVKGIGEFINLRTSV--SMALHPTSALYGLGYVP-EYVVYHELILT 782
Query: 955 NNINVYDSTNISEYALLLFGG 975
+ + T + + L GG
Sbjct: 783 SKEYMSTVTAVDPHWLAELGG 803
Score = 336 (123.3 bits), Expect = 1.3e-78, Sum P(2) = 1.3e-78
Identities = 81/208 (38%), Positives = 110/208 (52%)
Query: 258 LKERQEKLKSSDS-GKAMLSFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQ 316
+K++ E +SS S K + RE LPAF ++ + L+ + +NQV+VV GETG GKTTQL Q
Sbjct: 164 MKKQDEGGQSSFSKSKTLREQREFLPAFAVREDLLRVIRDNQVVVVVGETGSGKTTQLTQ 223
Query: 317 FILEEELSSLRGADCNIICTQPXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQT 376
F+ E+ + G I CTQP E +LG+ VGY IR E T
Sbjct: 224 FLYEDGYAKF-GM---IGCTQPRRVAAMSVAKRVSEEMEVDLGDLVGYAIRFEDCTGPNT 279
Query: 377 RLLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXM 436
+ + T GVLLR+ + DL S +++DE HER +N D
Sbjct: 280 AIKYMTDGVLLRESLVQTDLDKYSCIIMDEAHERALNTDVLMGLLKKILARRRDLKLIVT 339
Query: 437 SATINADLFSKYFGNAPTVHIPGLTFPV 464
SAT+NA+ FS++FG AP IPG TFPV
Sbjct: 340 SATMNAERFSRFFGGAPEFIIPGRTFPV 367
>RGD|1310723 [details] [associations]
symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide 8"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:1310723
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316
HOVERGEN:HBG039428 GeneTree:ENSGT00700000104241 KO:K12818 CTD:1659
OrthoDB:EOG4D26P2 UniGene:Rn.108087 EMBL:AY383690 IPI:IPI00370026
RefSeq:NP_001041309.1 SMR:Q6TXG4 Ensembl:ENSRNOT00000048140
GeneID:287727 KEGG:rno:287727 UCSC:RGD:1310723 NextBio:626887
Genevestigator:Q6TXG4 Uniprot:Q6TXG4
Length = 1210
Score = 538 (194.4 bits), Expect = 1.7e-78, Sum P(3) = 1.7e-78
Identities = 151/446 (33%), Positives = 232/446 (52%)
Query: 534 EQIDLGLVESTIEYICRHEGDGAILVFLTGWNDISKLLDQIKVN-KFLG-DPNKFLVLPL 591
+ +D L+ T+ I E G ILVFLTG +I + + K LG D + ++LP+
Sbjct: 724 DYLDASLI--TVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPV 781
Query: 592 HGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLA 651
+ ++P+ Q IFD PP RK+V+ATNIAE+S+TID + YVVD G K+ Y++ +
Sbjct: 782 YSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGID 841
Query: 652 CLLPSWISKASAHQRRGRAGRVQPGVCYKLYP-RIIHDAMLPYQLPEILRTPLQELCLHI 710
L+ + IS+A A QR GRAGR PG CY+LY R D ML +PEI RT L L +
Sbjct: 842 QLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSL 901
Query: 711 KSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIG 770
K++ + + SF P + L A+E L T+GALDD LT LGR + P++P +
Sbjct: 902 KAMGINDLLSFDFMDAPPMETLIT--AMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLC 959
Query: 771 KMLLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAF 830
KML+M C LTI + L+ +N F P + Q D+ K F DH+ LL +
Sbjct: 960 KMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQTE-GDHLTLLAVY 1018
Query: 831 DGYKDAKRNRRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYSH 890
+ +K+ N+ +C+ENF+ +L+ +D+R Q L G +D+ K +
Sbjct: 1019 NSWKN---NKFSNPWCYENFIQARSLRRAQDIRKQML------GIMDRHK-LDVVSCGKS 1068
Query: 891 DLEMVCAILCAGLYPNVVQCK-RKGKRAVFYTKEVGQVALHPSSVNANQNNFPLPY--MV 947
+ + AI C+G + N + ++G R + ++V V +HPSS N+ + Y +V
Sbjct: 1069 TVRVQKAI-CSGFFRNAAKKDPQEGYRTLI-DQQV--VYIHPSSALFNRQPEWVVYHELV 1124
Query: 948 YSEMVKTNNINVYDSTNISEYALLLF 973
+ + D + E+A F
Sbjct: 1125 LTTKEYMREVTTIDPRWLVEFAPAFF 1150
Score = 329 (120.9 bits), Expect = 1.7e-78, Sum P(3) = 1.7e-78
Identities = 76/199 (38%), Positives = 111/199 (55%)
Query: 273 AMLSFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCN 332
++L RE LP +K+K + ++AV +NQ+L+V GETG GKTTQ+ Q++ E +S RG
Sbjct: 526 SILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTS-RG---K 581
Query: 333 IICTQPXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVE 392
I CTQP E G LG+ VGY IR E S +T + + T G+LLR+ +
Sbjct: 582 IGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLI 641
Query: 393 DPDLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGNA 452
DPDL+ + +++DE HER ++ D SAT++A FS+YF A
Sbjct: 642 DPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEA 701
Query: 453 PTVHIPGLTFPVTDLFLED 471
P IPG T+PV L+ ++
Sbjct: 702 PIFTIPGRTYPVEILYTKE 720
Score = 54 (24.1 bits), Expect = 1.7e-78, Sum P(3) = 1.7e-78
Identities = 23/108 (21%), Positives = 44/108 (40%)
Query: 191 TEKELQMSIETERRVGNLLNSSQGNVPVNDSGIESSEVARRPKLSVKVANTISPPQSDSA 250
T+ L M + ++ G LN ++ V ++ E+S R P ++ +P D +
Sbjct: 298 TKTSLSMK-DVDQETGEDLNPNRRRNLVGETNEETS--MRNPDRPTHLSLVSAPEVEDDS 354
Query: 251 KERLNVILKERQEKLKSSDSGKAMLSFREKLPAFKMKAEFLKAVAENQ 298
ER + EK + A + +E+ P F + L V + +
Sbjct: 355 LERKRLTRISDPEKWEIKQMIAANVLSKEEFPDFDEETGILPKVDDEE 402
>UNIPROTKB|Q14562 [details] [associations]
symbol:DHX8 "ATP-dependent RNA helicase DHX8" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=TAS] [GO:0005681 "spliceosomal complex" evidence=TAS]
[GO:0008380 "RNA splicing" evidence=TAS] [GO:0006396 "RNA
processing" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 EMBL:D50487 GO:GO:0005524 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316
HOVERGEN:HBG039428 KO:K12818 OMA:NAWCYEN IPI:IPI00031508 PIR:A56236
RefSeq:NP_004932.1 UniGene:Hs.463105 PDB:2EQS PDB:3I4U PDBsum:2EQS
PDBsum:3I4U ProteinModelPortal:Q14562 SMR:Q14562 IntAct:Q14562
STRING:Q14562 PhosphoSite:Q14562 DMDM:3023637 PaxDb:Q14562
PeptideAtlas:Q14562 PRIDE:Q14562 Ensembl:ENST00000262415
GeneID:1659 KEGG:hsa:1659 UCSC:uc002idu.1 CTD:1659
GeneCards:GC17P041572 HGNC:HGNC:2749 HPA:HPA049285 MIM:600396
neXtProt:NX_Q14562 PharmGKB:PA27231 InParanoid:Q14562
OrthoDB:EOG4D26P2 PhylomeDB:Q14562 EvolutionaryTrace:Q14562
GenomeRNAi:1659 NextBio:6828 ArrayExpress:Q14562 Bgee:Q14562
CleanEx:HS_DHX8 Genevestigator:Q14562 GermOnline:ENSG00000067596
Uniprot:Q14562
Length = 1220
Score = 538 (194.4 bits), Expect = 1.8e-78, Sum P(3) = 1.8e-78
Identities = 151/446 (33%), Positives = 232/446 (52%)
Query: 534 EQIDLGLVESTIEYICRHEGDGAILVFLTGWNDISKLLDQIKVN-KFLG-DPNKFLVLPL 591
+ +D L+ T+ I E G ILVFLTG +I + + K LG D + ++LP+
Sbjct: 755 DYLDASLI--TVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPV 812
Query: 592 HGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLA 651
+ ++P+ Q IFD PP RK+V+ATNIAE+S+TID + YVVD G K+ Y++ +
Sbjct: 813 YSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGID 872
Query: 652 CLLPSWISKASAHQRRGRAGRVQPGVCYKLYP-RIIHDAMLPYQLPEILRTPLQELCLHI 710
L+ + IS+A A QR GRAGR PG CY+LY R D ML +PEI RT L L +
Sbjct: 873 QLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSL 932
Query: 711 KSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIG 770
K++ + + SF P + L A+E L T+GALDD LT LGR + P++P +
Sbjct: 933 KAMGINDLLSFDFMDAPPMETLIT--AMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLC 990
Query: 771 KMLLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAF 830
KML+M C LTI + L+ +N F P + Q D+ K F DH+ LL +
Sbjct: 991 KMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQTE-GDHLTLLAVY 1049
Query: 831 DGYKDAKRNRRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYSH 890
+ +K+ N+ +C+ENF+ +L+ +D+R Q L G +D+ K +
Sbjct: 1050 NSWKN---NKFSNPWCYENFIQARSLRRAQDIRKQML------GIMDRHK-LDVVSCGKS 1099
Query: 891 DLEMVCAILCAGLYPNVVQCK-RKGKRAVFYTKEVGQVALHPSSVNANQNNFPLPY--MV 947
+ + AI C+G + N + ++G R + ++V V +HPSS N+ + Y +V
Sbjct: 1100 TVRVQKAI-CSGFFRNAAKKDPQEGYRTLI-DQQV--VYIHPSSALFNRQPEWVVYHELV 1155
Query: 948 YSEMVKTNNINVYDSTNISEYALLLF 973
+ + D + E+A F
Sbjct: 1156 LTTKEYMREVTTIDPRWLVEFAPAFF 1181
Score = 329 (120.9 bits), Expect = 1.8e-78, Sum P(3) = 1.8e-78
Identities = 76/199 (38%), Positives = 111/199 (55%)
Query: 273 AMLSFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCN 332
++L RE LP +K+K + ++AV +NQ+L+V GETG GKTTQ+ Q++ E +S RG
Sbjct: 557 SILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTS-RG---K 612
Query: 333 IICTQPXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVE 392
I CTQP E G LG+ VGY IR E S +T + + T G+LLR+ +
Sbjct: 613 IGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLI 672
Query: 393 DPDLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGNA 452
DPDL+ + +++DE HER ++ D SAT++A FS+YF A
Sbjct: 673 DPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEA 732
Query: 453 PTVHIPGLTFPVTDLFLED 471
P IPG T+PV L+ ++
Sbjct: 733 PIFTIPGRTYPVEILYTKE 751
Score = 54 (24.1 bits), Expect = 1.8e-78, Sum P(3) = 1.8e-78
Identities = 23/108 (21%), Positives = 44/108 (40%)
Query: 191 TEKELQMSIETERRVGNLLNSSQGNVPVNDSGIESSEVARRPKLSVKVANTISPPQSDSA 250
T+ L M + ++ G LN ++ V ++ E+S R P ++ +P D +
Sbjct: 329 TKTSLSMK-DVDQETGEDLNPNRRRNLVGETNEETS--MRNPDRPTHLSLVSAPEVEDDS 385
Query: 251 KERLNVILKERQEKLKSSDSGKAMLSFREKLPAFKMKAEFLKAVAENQ 298
ER + EK + A + +E+ P F + L V + +
Sbjct: 386 LERKRLTRISDPEKWEIKQMIAANVLSKEEFPDFDEETGILPKVDDEE 433
Score = 44 (20.5 bits), Expect = 2.1e-77, Sum P(3) = 2.1e-77
Identities = 17/84 (20%), Positives = 36/84 (42%)
Query: 183 DLDERHGSTEKELQMSIETERRVGNLLNSSQGNVPVNDSGIESSEVARRPKLSVKVANTI 242
+LD G +K+L + + ++ + ++ N + S ++ +++ T+
Sbjct: 37 ELDNHLGINDKDLAEFVISLAEKNTTFDTFKASLVKNGAEFTDSLISNL----LRLIQTM 92
Query: 243 SPPQSDSAKERLNVILKERQEKLK 266
PP S + V K +EKLK
Sbjct: 93 RPPAKPSTSKDPVVKPKTEKEKLK 116
>UNIPROTKB|F5H658 [details] [associations]
symbol:DHX8 "ATP-dependent RNA helicase DHX8" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0005634
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
HGNC:HGNC:2749 EMBL:AC068675 EMBL:AC087650 IPI:IPI01010550
ProteinModelPortal:F5H658 SMR:F5H658 Ensembl:ENST00000540306
UCSC:uc010wig.2 ArrayExpress:F5H658 Bgee:F5H658 Uniprot:F5H658
Length = 1181
Score = 537 (194.1 bits), Expect = 1.9e-78, Sum P(3) = 1.9e-78
Identities = 145/409 (35%), Positives = 220/409 (53%)
Query: 534 EQIDLGLVESTIEYICRHEGDGAILVFLTGWNDISKLLDQIKVN-KFLG-DPNKFLVLPL 591
+ +D L+ T+ I E G ILVFLTG +I + + K LG D + ++LP+
Sbjct: 755 DYLDASLI--TVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPV 812
Query: 592 HGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLA 651
+ ++P+ Q IFD PP RK+V+ATNIAE+S+TID + YVVD G K+ Y++ +
Sbjct: 813 YSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGID 872
Query: 652 CLLPSWISKASAHQRRGRAGRVQPGVCYKLYP-RIIHDAMLPYQLPEILRTPLQELCLHI 710
L+ + IS+A A QR GRAGR PG CY+LY R D ML +PEI RT L L +
Sbjct: 873 QLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSL 932
Query: 711 KSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIG 770
K++ + + SF P + L A+E L T+GALDD LT LGR + P++P +
Sbjct: 933 KAMGINDLLSFDFMDAPPMETLIT--AMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLC 990
Query: 771 KMLLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAF 830
KML+M C LTI + L+ +N F P + Q D+ K F DH+ LL +
Sbjct: 991 KMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQTE-GDHLTLLAVY 1049
Query: 831 DGYKDAKRNRRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYSH 890
+ +K+ N+ +C+ENF+ +L+ +D+R Q L G +D+ K +
Sbjct: 1050 NSWKN---NKFSNPWCYENFIQARSLRRAQDIRKQML------GIMDRHK-LDVVSCGKS 1099
Query: 891 DLEMVCAILCAGLYPNVVQCK-RKGKRAVFYTKEVGQVALHPSSVNANQ 938
+ + AI C+G + N + ++G R + ++V V +HPSS N+
Sbjct: 1100 TVRVQKAI-CSGFFRNAAKKDPQEGYRTLI-DQQV--VYIHPSSALFNR 1144
Score = 329 (120.9 bits), Expect = 1.9e-78, Sum P(3) = 1.9e-78
Identities = 76/199 (38%), Positives = 111/199 (55%)
Query: 273 AMLSFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCN 332
++L RE LP +K+K + ++AV +NQ+L+V GETG GKTTQ+ Q++ E +S RG
Sbjct: 557 SILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTS-RG---K 612
Query: 333 IICTQPXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVE 392
I CTQP E G LG+ VGY IR E S +T + + T G+LLR+ +
Sbjct: 613 IGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLI 672
Query: 393 DPDLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGNA 452
DPDL+ + +++DE HER ++ D SAT++A FS+YF A
Sbjct: 673 DPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEA 732
Query: 453 PTVHIPGLTFPVTDLFLED 471
P IPG T+PV L+ ++
Sbjct: 733 PIFTIPGRTYPVEILYTKE 751
Score = 54 (24.1 bits), Expect = 1.9e-78, Sum P(3) = 1.9e-78
Identities = 23/108 (21%), Positives = 44/108 (40%)
Query: 191 TEKELQMSIETERRVGNLLNSSQGNVPVNDSGIESSEVARRPKLSVKVANTISPPQSDSA 250
T+ L M + ++ G LN ++ V ++ E+S R P ++ +P D +
Sbjct: 329 TKTSLSMK-DVDQETGEDLNPNRRRNLVGETNEETS--MRNPDRPTHLSLVSAPEVEDDS 385
Query: 251 KERLNVILKERQEKLKSSDSGKAMLSFREKLPAFKMKAEFLKAVAENQ 298
ER + EK + A + +E+ P F + L V + +
Sbjct: 386 LERKRLTRISDPEKWEIKQMIAANVLSKEEFPDFDEETGILPKVDDEE 433
Score = 44 (20.5 bits), Expect = 2.1e-77, Sum P(3) = 2.1e-77
Identities = 17/84 (20%), Positives = 36/84 (42%)
Query: 183 DLDERHGSTEKELQMSIETERRVGNLLNSSQGNVPVNDSGIESSEVARRPKLSVKVANTI 242
+LD G +K+L + + ++ + ++ N + S ++ +++ T+
Sbjct: 37 ELDNHLGINDKDLAEFVISLAEKNTTFDTFKASLVKNGAEFTDSLISNL----LRLIQTM 92
Query: 243 SPPQSDSAKERLNVILKERQEKLK 266
PP S + V K +EKLK
Sbjct: 93 RPPAKPSTSKDPVVKPKTEKEKLK 116
>UNIPROTKB|D4A805 [details] [associations]
symbol:Dhx8 "Protein Dhx8" species:10116 "Rattus
norvegicus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1310723 GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 EMBL:CH473948 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
OMA:NAWCYEN IPI:IPI00567810 UniGene:Rn.108087
Ensembl:ENSRNOT00000028198 Uniprot:D4A805
Length = 1242
Score = 538 (194.4 bits), Expect = 2.1e-78, Sum P(3) = 2.1e-78
Identities = 151/446 (33%), Positives = 232/446 (52%)
Query: 534 EQIDLGLVESTIEYICRHEGDGAILVFLTGWNDISKLLDQIKVN-KFLG-DPNKFLVLPL 591
+ +D L+ T+ I E G ILVFLTG +I + + K LG D + ++LP+
Sbjct: 777 DYLDASLI--TVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPV 834
Query: 592 HGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLA 651
+ ++P+ Q IFD PP RK+V+ATNIAE+S+TID + YVVD G K+ Y++ +
Sbjct: 835 YSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGID 894
Query: 652 CLLPSWISKASAHQRRGRAGRVQPGVCYKLYP-RIIHDAMLPYQLPEILRTPLQELCLHI 710
L+ + IS+A A QR GRAGR PG CY+LY R D ML +PEI RT L L +
Sbjct: 895 QLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSL 954
Query: 711 KSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIG 770
K++ + + SF P + L A+E L T+GALDD LT LGR + P++P +
Sbjct: 955 KAMGINDLLSFDFMDAPPMETLIT--AMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLC 1012
Query: 771 KMLLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAF 830
KML+M C LTI + L+ +N F P + Q D+ K F DH+ LL +
Sbjct: 1013 KMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQTE-GDHLTLLAVY 1071
Query: 831 DGYKDAKRNRRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYSH 890
+ +K+ N+ +C+ENF+ +L+ +D+R Q L G +D+ K +
Sbjct: 1072 NSWKN---NKFSNPWCYENFIQARSLRRAQDIRKQML------GIMDRHK-LDVVSCGKS 1121
Query: 891 DLEMVCAILCAGLYPNVVQCK-RKGKRAVFYTKEVGQVALHPSSVNANQNNFPLPY--MV 947
+ + AI C+G + N + ++G R + ++V V +HPSS N+ + Y +V
Sbjct: 1122 TVRVQKAI-CSGFFRNAAKKDPQEGYRTLI-DQQV--VYIHPSSALFNRQPEWVVYHELV 1177
Query: 948 YSEMVKTNNINVYDSTNISEYALLLF 973
+ + D + E+A F
Sbjct: 1178 LTTKEYMREVTTIDPRWLVEFAPAFF 1203
Score = 329 (120.9 bits), Expect = 2.1e-78, Sum P(3) = 2.1e-78
Identities = 76/199 (38%), Positives = 111/199 (55%)
Query: 273 AMLSFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCN 332
++L RE LP +K+K + ++AV +NQ+L+V GETG GKTTQ+ Q++ E +S RG
Sbjct: 579 SILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTS-RG---K 634
Query: 333 IICTQPXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVE 392
I CTQP E G LG+ VGY IR E S +T + + T G+LLR+ +
Sbjct: 635 IGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLI 694
Query: 393 DPDLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGNA 452
DPDL+ + +++DE HER ++ D SAT++A FS+YF A
Sbjct: 695 DPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEA 754
Query: 453 PTVHIPGLTFPVTDLFLED 471
P IPG T+PV L+ ++
Sbjct: 755 PIFTIPGRTYPVEILYTKE 773
Score = 54 (24.1 bits), Expect = 2.1e-78, Sum P(3) = 2.1e-78
Identities = 23/108 (21%), Positives = 44/108 (40%)
Query: 191 TEKELQMSIETERRVGNLLNSSQGNVPVNDSGIESSEVARRPKLSVKVANTISPPQSDSA 250
T+ L M + ++ G LN ++ V ++ E+S R P ++ +P D +
Sbjct: 351 TKTSLSMK-DVDQETGEDLNPNRRRNLVGETNEETS--MRNPDRPTHLSLVSAPEVEDDS 407
Query: 251 KERLNVILKERQEKLKSSDSGKAMLSFREKLPAFKMKAEFLKAVAENQ 298
ER + EK + A + +E+ P F + L V + +
Sbjct: 408 LERKRLTRISDPEKWEIKQMIAANVLSKEEFPDFDEETGILPKVDDEE 455
Score = 44 (20.5 bits), Expect = 2.3e-77, Sum P(3) = 2.3e-77
Identities = 17/84 (20%), Positives = 36/84 (42%)
Query: 183 DLDERHGSTEKELQMSIETERRVGNLLNSSQGNVPVNDSGIESSEVARRPKLSVKVANTI 242
+LD G +K+L + + ++ + ++ N + S ++ +++ T+
Sbjct: 37 ELDNHLGINDKDLAEFVISLAEKNTTFDTFKASLVKNGAEFTDSLISNL----LRLIQTM 92
Query: 243 SPPQSDSAKERLNVILKERQEKLK 266
PP S + V K +EKLK
Sbjct: 93 RPPAKPSTSKDPVVKPKTEKEKLK 116
>MGI|MGI:1306823 [details] [associations]
symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide 8"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
MGI:MGI:1306823 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AL590994 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 InterPro:IPR022967 SMART:SM00316 HOVERGEN:HBG039428
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN CTD:1659
OrthoDB:EOG4D26P2 EMBL:BC132445 EMBL:AL591436 IPI:IPI00461304
RefSeq:NP_659080.2 UniGene:Mm.28186 ProteinModelPortal:A2A4P0
SMR:A2A4P0 PaxDb:A2A4P0 PRIDE:A2A4P0 DNASU:217207
Ensembl:ENSMUST00000039152 GeneID:217207 KEGG:mmu:217207
UCSC:uc007lpr.1 InParanoid:A2A4P0 NextBio:375641 Bgee:A2A4P0
Genevestigator:A2A4P0 Uniprot:A2A4P0
Length = 1244
Score = 538 (194.4 bits), Expect = 2.1e-78, Sum P(3) = 2.1e-78
Identities = 151/446 (33%), Positives = 232/446 (52%)
Query: 534 EQIDLGLVESTIEYICRHEGDGAILVFLTGWNDISKLLDQIKVN-KFLG-DPNKFLVLPL 591
+ +D L+ T+ I E G ILVFLTG +I + + K LG D + ++LP+
Sbjct: 779 DYLDASLI--TVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPV 836
Query: 592 HGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLA 651
+ ++P+ Q IFD PP RK+V+ATNIAE+S+TID + YVVD G K+ Y++ +
Sbjct: 837 YSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGID 896
Query: 652 CLLPSWISKASAHQRRGRAGRVQPGVCYKLYP-RIIHDAMLPYQLPEILRTPLQELCLHI 710
L+ + IS+A A QR GRAGR PG CY+LY R D ML +PEI RT L L +
Sbjct: 897 QLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSL 956
Query: 711 KSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIG 770
K++ + + SF P + L A+E L T+GALDD LT LGR + P++P +
Sbjct: 957 KAMGINDLLSFDFMDAPPMETLIT--AMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLC 1014
Query: 771 KMLLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAF 830
KML+M C LTI + L+ +N F P + Q D+ K F DH+ LL +
Sbjct: 1015 KMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQTE-GDHLTLLAVY 1073
Query: 831 DGYKDAKRNRRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYSH 890
+ +K+ N+ +C+ENF+ +L+ +D+R Q L G +D+ K +
Sbjct: 1074 NSWKN---NKFSNPWCYENFIQARSLRRAQDIRKQML------GIMDRHK-LDVVSCGKS 1123
Query: 891 DLEMVCAILCAGLYPNVVQCK-RKGKRAVFYTKEVGQVALHPSSVNANQNNFPLPY--MV 947
+ + AI C+G + N + ++G R + ++V V +HPSS N+ + Y +V
Sbjct: 1124 TVRVQKAI-CSGFFRNAAKKDPQEGYRTLI-DQQV--VYIHPSSALFNRQPEWVVYHELV 1179
Query: 948 YSEMVKTNNINVYDSTNISEYALLLF 973
+ + D + E+A F
Sbjct: 1180 LTTKEYMREVTTIDPRWLVEFAPAFF 1205
Score = 329 (120.9 bits), Expect = 2.1e-78, Sum P(3) = 2.1e-78
Identities = 76/199 (38%), Positives = 111/199 (55%)
Query: 273 AMLSFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCN 332
++L RE LP +K+K + ++AV +NQ+L+V GETG GKTTQ+ Q++ E +S RG
Sbjct: 581 SILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTS-RG---K 636
Query: 333 IICTQPXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVE 392
I CTQP E G LG+ VGY IR E S +T + + T G+LLR+ +
Sbjct: 637 IGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLI 696
Query: 393 DPDLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGNA 452
DPDL+ + +++DE HER ++ D SAT++A FS+YF A
Sbjct: 697 DPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEA 756
Query: 453 PTVHIPGLTFPVTDLFLED 471
P IPG T+PV L+ ++
Sbjct: 757 PIFTIPGRTYPVEILYTKE 775
Score = 54 (24.1 bits), Expect = 2.1e-78, Sum P(3) = 2.1e-78
Identities = 23/108 (21%), Positives = 44/108 (40%)
Query: 191 TEKELQMSIETERRVGNLLNSSQGNVPVNDSGIESSEVARRPKLSVKVANTISPPQSDSA 250
T+ L M + ++ G LN ++ V ++ E+S R P ++ +P D +
Sbjct: 353 TKTSLSMK-DVDQETGEDLNPNRRRNLVGETNEETS--MRNPDRPTHLSLVSAPEVEDDS 409
Query: 251 KERLNVILKERQEKLKSSDSGKAMLSFREKLPAFKMKAEFLKAVAENQ 298
ER + EK + A + +E+ P F + L V + +
Sbjct: 410 LERKRLTRISDPEKWEIKQMIAANVLSKEEFPDFDEETGILPKVDDEE 457
Score = 41 (19.5 bits), Expect = 4.9e-77, Sum P(3) = 4.9e-77
Identities = 16/84 (19%), Positives = 36/84 (42%)
Query: 183 DLDERHGSTEKELQMSIETERRVGNLLNSSQGNVPVNDSGIESSEVARRPKLSVKVANTI 242
+LD G +K+L + + ++ + ++ N + S ++ +++ T+
Sbjct: 37 ELDNHLGINDKDLAEFVISLAEKNTTFDTFKASLVKNGAEFTDSLISNL----LRLIQTM 92
Query: 243 SPPQSDSAKERLNVILKERQEKLK 266
PP S + V K +EKL+
Sbjct: 93 RPPAKPSTSKDPVVKPKTEKEKLR 116
>WB|WBGene00003393 [details] [associations]
symbol:mog-5 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0002009 "morphogenesis
of an epithelium" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0042127
"regulation of cell proliferation" evidence=IMP] [GO:0040020
"regulation of meiosis" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] [GO:0048589 "developmental growth" evidence=IMP]
[GO:0010172 "embryonic body morphogenesis" evidence=IMP]
[GO:0040022 "feminization of hermaphroditic germ-line"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006915
GO:GO:0002119 GO:GO:0008380 GO:GO:0018996 GO:GO:0006397
GO:GO:0040011 GO:GO:0003723 GO:GO:0042127 GO:GO:0007281
GO:GO:0048589 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0040022 GO:GO:0008026 EMBL:FO081042 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN EMBL:AF286899 PIR:T15921 RefSeq:NP_495019.1
UniGene:Cel.7556 ProteinModelPortal:Q09530 SMR:Q09530
DIP:DIP-25759N IntAct:Q09530 MINT:MINT-1046882 STRING:Q09530
PaxDb:Q09530 EnsemblMetazoa:EEED8.5 GeneID:173920
KEGG:cel:CELE_EEED8.5 UCSC:EEED8.5 CTD:173920 WormBase:EEED8.5
InParanoid:Q09530 NextBio:881669 Uniprot:Q09530
Length = 1200
Score = 534 (193.0 bits), Expect = 2.8e-78, Sum P(2) = 2.8e-78
Identities = 138/394 (35%), Positives = 208/394 (52%)
Query: 544 TIEYICRHEGDGAILVFLTGWNDISKLLDQIKVN-KFLG-DPNKFLVLPLHGSMPTINQR 601
T+ I E G +LVFLTG +I + + K +G D + ++LP++G++P+ Q
Sbjct: 738 TVMQIHLTEPPGDVLVFLTGQEEIDTSCEVLYERMKSMGPDVPELIILPVYGALPSEMQT 797
Query: 602 EIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKA 661
IFD P KRK+V+ATNIAE+S+TID + YVVD G K+ Y+ + + L+ + IS+A
Sbjct: 798 RIFDPAPAGKRKVVIATNIAETSLTIDGIFYVVDPGFVKQKIYNPKSGMDSLVVTPISQA 857
Query: 662 SAHQRRGRAGRVQPGVCYKLYP-RIIHDAMLPYQLPEILRTPLQELCLHIKSLQLGTVGS 720
+A QR GRAGR PG CY+LY R D MLP +PEI RT L L +K++ + +
Sbjct: 858 AAKQRSGRAGRTGPGKCYRLYTERAFRDEMLPTPVPEIQRTNLASTLLQLKAMGINNLID 917
Query: 721 FLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGKMLLMGAIFQ 780
F P D + A+ L T+ ALD LT LGR + P++P++ K+L+M
Sbjct: 918 FDFMDAPPLDSMIT--ALNTLHTLSALDGDGLLTKLGRRMAEFPLEPSLSKLLIMSVDLG 975
Query: 781 CLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAKRNR 840
C LTI A L +N F P Q D+ K F DH+ LL ++ +K+ +
Sbjct: 976 CSEEVLTIVAMLNVQNIFYRPKEKQDHADQKKAKFHQPE-GDHLTLLAVYNSWKN---HH 1031
Query: 841 RERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYSHDLEMVCAILC 900
+ +C+ENF+ +++ +D+R Q L G +D+ K D+ V +C
Sbjct: 1032 FSQPWCFENFIQVRSMKRAQDIRKQLL------GIMDRHK--LLMVSCGRDVSRVQKAIC 1083
Query: 901 AGLYPNVVQCKRKGKRAVFYTKEVGQ-VALHPSS 933
+G + N KR + + T GQ V +HPSS
Sbjct: 1084 SGFFRNAA--KRDPQEG-YRTLTDGQNVYIHPSS 1114
Score = 339 (124.4 bits), Expect = 2.8e-78, Sum P(2) = 2.8e-78
Identities = 90/235 (38%), Positives = 121/235 (51%)
Query: 247 SDSAKERLNVILKERQEKLKS-SDSGKA---------MLSFREKLPAFKMKAEFLKAVAE 296
+D +K+R N +KE E LK + GKA M+ RE LP F +K ++A+ +
Sbjct: 497 ADESKDRNNK-MKEMPEWLKHVTAGGKATYGRRTNLSMVEQRESLPIFALKKNLMEAMID 555
Query: 297 NQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQPXXXXXXXXXXXXXXERGE 356
NQ+LVV GETG GKTTQ+ Q+ +E L RG I CTQP E G
Sbjct: 556 NQILVVVGETGSGKTTQMTQYAIEAGLGR-RG---KIGCTQPRRVAAMSVAKRVAEEYGC 611
Query: 357 NLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDF 416
LG VGY IR E S T + + T G+LLR+ + DPDLS S +++DE HER ++ D
Sbjct: 612 KLGTDVGYTIRFEDCTSQDTIIKYMTDGMLLRECLIDPDLSGYSLIMLDEAHERTIHTDV 671
Query: 417 XXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGNAPTVHIPGLTFPVTDLFLED 471
SAT+++ FS+YF AP IPG TFPV L+ +
Sbjct: 672 LFGLLKAAARKRPELKLIITSATLDSVKFSEYFLEAPIFTIPGRTFPVEILYTRE 726
>UNIPROTKB|Q09530 [details] [associations]
symbol:mog-5 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-5" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006915
GO:GO:0002119 GO:GO:0008380 GO:GO:0018996 GO:GO:0006397
GO:GO:0040011 GO:GO:0003723 GO:GO:0042127 GO:GO:0007281
GO:GO:0048589 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0040022 GO:GO:0008026 EMBL:FO081042 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN EMBL:AF286899 PIR:T15921 RefSeq:NP_495019.1
UniGene:Cel.7556 ProteinModelPortal:Q09530 SMR:Q09530
DIP:DIP-25759N IntAct:Q09530 MINT:MINT-1046882 STRING:Q09530
PaxDb:Q09530 EnsemblMetazoa:EEED8.5 GeneID:173920
KEGG:cel:CELE_EEED8.5 UCSC:EEED8.5 CTD:173920 WormBase:EEED8.5
InParanoid:Q09530 NextBio:881669 Uniprot:Q09530
Length = 1200
Score = 534 (193.0 bits), Expect = 2.8e-78, Sum P(2) = 2.8e-78
Identities = 138/394 (35%), Positives = 208/394 (52%)
Query: 544 TIEYICRHEGDGAILVFLTGWNDISKLLDQIKVN-KFLG-DPNKFLVLPLHGSMPTINQR 601
T+ I E G +LVFLTG +I + + K +G D + ++LP++G++P+ Q
Sbjct: 738 TVMQIHLTEPPGDVLVFLTGQEEIDTSCEVLYERMKSMGPDVPELIILPVYGALPSEMQT 797
Query: 602 EIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKA 661
IFD P KRK+V+ATNIAE+S+TID + YVVD G K+ Y+ + + L+ + IS+A
Sbjct: 798 RIFDPAPAGKRKVVIATNIAETSLTIDGIFYVVDPGFVKQKIYNPKSGMDSLVVTPISQA 857
Query: 662 SAHQRRGRAGRVQPGVCYKLYP-RIIHDAMLPYQLPEILRTPLQELCLHIKSLQLGTVGS 720
+A QR GRAGR PG CY+LY R D MLP +PEI RT L L +K++ + +
Sbjct: 858 AAKQRSGRAGRTGPGKCYRLYTERAFRDEMLPTPVPEIQRTNLASTLLQLKAMGINNLID 917
Query: 721 FLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGKMLLMGAIFQ 780
F P D + A+ L T+ ALD LT LGR + P++P++ K+L+M
Sbjct: 918 FDFMDAPPLDSMIT--ALNTLHTLSALDGDGLLTKLGRRMAEFPLEPSLSKLLIMSVDLG 975
Query: 781 CLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAKRNR 840
C LTI A L +N F P Q D+ K F DH+ LL ++ +K+ +
Sbjct: 976 CSEEVLTIVAMLNVQNIFYRPKEKQDHADQKKAKFHQPE-GDHLTLLAVYNSWKN---HH 1031
Query: 841 RERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYSHDLEMVCAILC 900
+ +C+ENF+ +++ +D+R Q L G +D+ K D+ V +C
Sbjct: 1032 FSQPWCFENFIQVRSMKRAQDIRKQLL------GIMDRHK--LLMVSCGRDVSRVQKAIC 1083
Query: 901 AGLYPNVVQCKRKGKRAVFYTKEVGQ-VALHPSS 933
+G + N KR + + T GQ V +HPSS
Sbjct: 1084 SGFFRNAA--KRDPQEG-YRTLTDGQNVYIHPSS 1114
Score = 339 (124.4 bits), Expect = 2.8e-78, Sum P(2) = 2.8e-78
Identities = 90/235 (38%), Positives = 121/235 (51%)
Query: 247 SDSAKERLNVILKERQEKLKS-SDSGKA---------MLSFREKLPAFKMKAEFLKAVAE 296
+D +K+R N +KE E LK + GKA M+ RE LP F +K ++A+ +
Sbjct: 497 ADESKDRNNK-MKEMPEWLKHVTAGGKATYGRRTNLSMVEQRESLPIFALKKNLMEAMID 555
Query: 297 NQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQPXXXXXXXXXXXXXXERGE 356
NQ+LVV GETG GKTTQ+ Q+ +E L RG I CTQP E G
Sbjct: 556 NQILVVVGETGSGKTTQMTQYAIEAGLGR-RG---KIGCTQPRRVAAMSVAKRVAEEYGC 611
Query: 357 NLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDF 416
LG VGY IR E S T + + T G+LLR+ + DPDLS S +++DE HER ++ D
Sbjct: 612 KLGTDVGYTIRFEDCTSQDTIIKYMTDGMLLRECLIDPDLSGYSLIMLDEAHERTIHTDV 671
Query: 417 XXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGNAPTVHIPGLTFPVTDLFLED 471
SAT+++ FS+YF AP IPG TFPV L+ +
Sbjct: 672 LFGLLKAAARKRPELKLIITSATLDSVKFSEYFLEAPIFTIPGRTFPVEILYTRE 726
>DICTYBASE|DDB_G0291183 [details] [associations]
symbol:dhx8 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA;ISS]
[GO:0006396 "RNA processing" evidence=ISS] [GO:0005681
"spliceosomal complex" evidence=IEA;ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
dictyBase:DDB_G0291183 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0005681 GenomeReviews:CM000154_GR GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 EMBL:AAFI02000175
InterPro:IPR022967 SMART:SM00316 KO:K12818 OMA:NAWCYEN
RefSeq:XP_635385.1 HSSP:P05055 ProteinModelPortal:Q54F05
EnsemblProtists:DDB0233399 GeneID:8628033 KEGG:ddi:DDB_G0291183
ProtClustDB:CLSZ2846610 Uniprot:Q54F05
Length = 1160
Score = 533 (192.7 bits), Expect = 3.0e-78, Sum P(2) = 3.0e-78
Identities = 138/412 (33%), Positives = 221/412 (53%)
Query: 533 AEQIDLGLVESTIEYICRHEGDGAILVFLTGWNDISKLLDQIKVN-KFLGD--PNKFLVL 589
A+ +D L+ T+ I E G IL+FLTG +I + K LG P+ ++L
Sbjct: 697 ADYLDASLI--TVMQIHLSEPPGDILLFLTGQEEIDAACQILYERMKSLGSNVPD-LIIL 753
Query: 590 PLHGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNK 649
P++ ++P+ Q +IF+ PP RK+V+ATNIAE+S+TID + YV+D G +K+ ++ N
Sbjct: 754 PVYSALPSEMQTKIFEPAPPGSRKVVIATNIAETSLTIDGIYYVIDPGFSKQKCFNPKNG 813
Query: 650 LACLLPSWISKASAHQRRGRAGRVQPGVCYKLYPR-IIHDAMLPYQLPEILRTPLQELCL 708
+ L+ + IS+A+A QR GRAGR PG CY+LY + ML +PEI RT L L
Sbjct: 814 MDSLVVAPISQAAARQRSGRAGRTGPGKCYRLYTESAFKNEMLASSIPEIQRTNLGNTVL 873
Query: 709 HIKSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPN 768
+K++ + + +F + PP + +A+E L ++GALD+ LT LGR + P+DP
Sbjct: 874 TMKAMGINDLLNF--DFMDPPPVQTLVSAMEQLYSLGALDEEGLLTRLGRKMAEFPLDPQ 931
Query: 769 IGKMLLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLK 828
+ KML+ C + LT+ A L+ +N F P Q D+ K F DH+ LL
Sbjct: 932 LSKMLIASVDLGCSDEILTVVAMLSVQNVFYRPKEKQALADQKKAKFFQPE-GDHLTLLN 990
Query: 829 AFDGYKDAKRNRRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRY 888
++ +K++K + +C+ENF+ +L+ +D+R Q + ++ K SA Y
Sbjct: 991 VYESWKNSKFSN---PWCFENFVQARSLRRAQDVRKQLITIMDRY----KLDIISAGRNY 1043
Query: 889 SHDLEMVCAILCAGLYPNVVQCKRKGKRAVFYTKEVGQ-VALHPSSVNANQN 939
+ + +C+G + N +K + T GQ V +HPSS N+N
Sbjct: 1044 TK----IQKAICSGFFANA---SKKDPNEGYKTLVEGQPVYIHPSSTLFNRN 1088
Score = 339 (124.4 bits), Expect = 3.0e-78, Sum P(2) = 3.0e-78
Identities = 80/194 (41%), Positives = 106/194 (54%)
Query: 278 REKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQ 337
RE LP F ++ FL+AV+E+Q+LVV GETG GKTTQ+ Q++ E + RG I CTQ
Sbjct: 505 RESLPIFPLREAFLQAVSEHQLLVVIGETGSGKTTQMAQYLAEAGYGT-RG---KIGCTQ 560
Query: 338 PXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVEDPDLS 397
P E G LG+ VGY IR E S +T + F T G+LLR+ + DP+LS
Sbjct: 561 PRRVAAMSVSKRVAEEFGCQLGQEVGYAIRFEDCTSPETIIKFMTDGILLRECLLDPNLS 620
Query: 398 CVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGNAPTVHI 457
S +++DE HER ++ D SAT+ A+ FSKYF NA I
Sbjct: 621 AYSVIILDEAHERTISTDVLFGLLKQALQRRPELKVLITSATLEAEKFSKYFMNAQLFII 680
Query: 458 PGLTFPVTDLFLED 471
PG TFPV + +D
Sbjct: 681 PGRTFPVDIRYTKD 694
>UNIPROTKB|G4MTU4 [details] [associations]
symbol:MGG_11351 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp16" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:CM001232 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K12815 RefSeq:XP_003713740.1 EnsemblFungi:MGG_11351T0
GeneID:5051310 KEGG:mgr:MGG_11351 Uniprot:G4MTU4
Length = 999
Score = 517 (187.1 bits), Expect = 3.4e-78, Sum P(2) = 3.4e-78
Identities = 139/425 (32%), Positives = 213/425 (50%)
Query: 553 GDGAILVFLTGWNDISKLLDQIKVN-KFLGDPNKFLVLPLHGSMPTINQREIFDRPPPNK 611
G G ILVF+TG DI + ++ L DP K +LP++ MP Q +IFDR PP
Sbjct: 510 GTGDILVFMTGQEDIEVTCELVRERLDALNDPPKLSILPIYSQMPADLQAKIFDRAPPGV 569
Query: 612 RKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAG 671
RK ++ATNIAE+S+T+D ++YVVD G +K Y+ + L + IS+A+A QR GRAG
Sbjct: 570 RKCIVATNIAETSLTVDGIMYVVDAGYSKLKVYNPKMGMDTLQITPISQANASQRSGRAG 629
Query: 672 RVQPGVCYKLYP-RIIHDAMLPYQLPEILRTPLQELCLHIKSLQLGTVGSFLSKALQPPD 730
R PG ++L+ + D + +PEI RT L L IKSL + + F + PP
Sbjct: 630 RTGPGKAFRLFTEKAFKDELYIQTIPEIQRTNLSNTILLIKSLGVKDMLDF--DFMDPPP 687
Query: 731 PLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGKMLLMGAIFQCLNPALTIAA 790
+ ++ L +GALD++ ++T LGR + P+DP + K+++M + C +TI +
Sbjct: 688 QDTMTTSLFDLWALGALDNLGDMTDLGRKMNFFPMDPPLAKLIIMAEEYGCTEEMITIVS 747
Query: 791 ALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAKRNRRERDFCWENF 850
L+ N F P Q+E D A+ F SDH+ L Y K N +C +F
Sbjct: 748 MLSVPNVFYRPKERQEESDAAREKFFVPE-SDHLTFLHV---YSQWKANGHSDAWCSRHF 803
Query: 851 LSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYSHDLEMVCAILCAGLYPNVVQC 910
L +L+ +++R Q LD++ S G D ++V +C+G Y +
Sbjct: 804 LHSKSLRRAKEVRDQLLDIMKTQKMDIVSCGT--------DWDVVRRCICSGYYHQAAKV 855
Query: 911 KRKGKRAVFYTKEVGQVALHPSSVNANQNNFPLPYMVYSEMVKTNNINVYDSTNISEYAL 970
K G+ T V LHP+S P Y+VY E++ T+ + T++ L
Sbjct: 856 KGIGEYINLRTSVT--VQLHPTSALYGLGFLP-DYVVYHELILTSKEYMSTVTSVDPMWL 912
Query: 971 LLFGG 975
GG
Sbjct: 913 ADLGG 917
Score = 352 (129.0 bits), Expect = 3.4e-78, Sum P(2) = 3.4e-78
Identities = 99/305 (32%), Positives = 145/305 (47%)
Query: 176 PLPMYRPDLDE-----RHGS-TEKELQMSIETERRVGNLLNSSQGNVPVNDSGIESSEVA 229
P+P R + + R GS KE + E +++ + N + G N GI+ E
Sbjct: 195 PVPAVRDNQSDMAVFSRKGSRVVKERRQQRERQKQAQDATNMA-GTALGNLMGIKGEEDG 253
Query: 230 RRPKLSVKVANTISPPQSDSAKERLNVILKERQEKLKSSDSGKAMLSFREKLPAFKMKAE 289
L V + +++ + + + +K+ S + K++ RE LPAF ++ +
Sbjct: 254 DSA-LPVPDDQAPAEVKAEKSDNKFSEHMKKNDGASNFSQT-KSIREQREFLPAFAVRED 311
Query: 290 FLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQPXXXXXXXXXXX 349
++ + +NQV++V GETG GKTTQL QF+ E+ L G I CTQP
Sbjct: 312 LMRVIRDNQVIIVVGETGSGKTTQLTQFLYEDGYGQL-GM---IGCTQPRRVAAMSVAKR 367
Query: 350 XXXERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHE 409
E LG TVGY IR E S T + + T GVLLR+ + +PDL S +++DE HE
Sbjct: 368 VSEEMEVKLGGTVGYAIRFEDCTSKDTVIKYMTDGVLLRESLNEPDLDRYSCIIMDEAHE 427
Query: 410 RGMNEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGNAPTVHIPGLTFPVTDLFL 469
R +N D SAT+NA FS +FG AP IPG TFPV +F
Sbjct: 428 RALNTDVLMGLFKKILQRRRDLKLIVTSATMNAKRFSDFFGGAPDFTIPGRTFPVDVMFS 487
Query: 470 EDVLE 474
+E
Sbjct: 488 RSPVE 492
>ZFIN|ZDB-GENE-030131-650 [details] [associations]
symbol:dhx15 "DEAH (Asp-Glu-Ala-His) box
polypeptide 15" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-030131-650 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA CTD:1665 EMBL:CU651678 IPI:IPI00481686
RefSeq:NP_001108613.1 UniGene:Dr.4024 Ensembl:ENSDART00000081245
GeneID:321931 KEGG:dre:321931 NextBio:20807587 Uniprot:E7F3I8
Length = 769
Score = 553 (199.7 bits), Expect = 6.7e-78, Sum P(2) = 6.7e-78
Identities = 142/435 (32%), Positives = 231/435 (53%)
Query: 541 VESTIE-YICRHEGDGAILVFLTGWNDISKLLDQIK--VNKFLGDPNKFLVLPLHGSMPT 597
+ + I+ ++C E +G +L+FLTG +I + +IK ++ D ++PL+ ++P
Sbjct: 310 IRTVIQIHMCE-EDEGDVLLFLTGQEEIDEACKRIKREIDDLGPDVGDIKIIPLYSTLPP 368
Query: 598 INQREIFDRPPPNK------RKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLA 651
Q+ IF+ PPP K RK+V++TNIAE+S+TID VV+V+D G AK+ Y+ ++
Sbjct: 369 QQQQRIFEPPPPRKPNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVE 428
Query: 652 CLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDA-MLPYQLPEILRTPLQELCLHI 710
LL + ISKASA QR GRAGR +PG C++LY + M PEILR+ L + L +
Sbjct: 429 SLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQL 488
Query: 711 KSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIG 770
K L + + F + PP P + A+ELL + AL+D +LT LG + P+DP +
Sbjct: 489 KKLGIDDLVHF--DFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLA 546
Query: 771 KMLLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAF 830
KM++ F C N L+I A L+ FV P +K DE+K FA DH+ LL +
Sbjct: 547 KMVIASCDFNCSNEVLSITAMLSVPQCFVRPTEAKKAADESKMRFAHID-GDHLTLLNVY 605
Query: 831 DGYKDAKRNRRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYSH 890
+K +N +C++NF++ +L +++R Q ++ +S ++ + Y +
Sbjct: 606 HAFK---QNHESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTEFTSRDYYIN 662
Query: 891 DLEMVCAILCAGLYPNVVQCKRKGKRAVFYTKEVGQVALHPSSVNANQNNFPLPYMVYSE 950
+ L G + V +R G +V V LHPS+V ++ P +++Y+E
Sbjct: 663 ----IRRALVTGFFMQVAHLERTGHYLTVKDNQV--VQLHPSTVLDHK---P-EWVLYNE 712
Query: 951 MVKTNNINVYDSTNI 965
V T + T+I
Sbjct: 713 FVLTTKNYIRTCTDI 727
Score = 289 (106.8 bits), Expect = 6.7e-78, Sum P(2) = 6.7e-78
Identities = 70/195 (35%), Positives = 98/195 (50%)
Query: 274 MLSFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNI 333
+L R +LP ++ K F + +Q V+ GETG GKTTQ+PQ+ ++ + SL G +
Sbjct: 104 ILKKRLQLPVWEYKERFNDILNRHQSFVLVGETGSGKTTQIPQWCVDM-VRSLPGPKRGV 162
Query: 334 ICTQPXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVED 393
CTQP E LG+ VGY IR E SA+T L + T G+LLR+ + D
Sbjct: 163 ACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMND 222
Query: 394 PDLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGNAP 453
P L +++DE HER + D MSAT++A F YF N P
Sbjct: 223 PLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQVYFDNCP 282
Query: 454 TVHIPGLTFPVTDLF 468
+ IPG T PV ++F
Sbjct: 283 LLTIPGRTHPV-EIF 296
Score = 54 (24.1 bits), Expect = 3.8e-53, Sum P(2) = 3.8e-53
Identities = 15/56 (26%), Positives = 30/56 (53%)
Query: 192 EKELQMSI-ETERRVGNLLNSSQGNVPVNDSGIESSEVARRPKLSVKVANTISPPQ 246
+K LQ+ + E + R ++LN Q V V ++G S + + P+ V + ++ P+
Sbjct: 106 KKRLQLPVWEYKERFNDILNRHQSFVLVGETG--SGKTTQIPQWCVDMVRSLPGPK 159
>FB|FBgn0086895 [details] [associations]
symbol:pea "peanuts" species:7227 "Drosophila melanogaster"
[GO:0007286 "spermatid development" evidence=IMP] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC;ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IC] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AE013599
GO:GO:0005524 GO:GO:0022008 GO:GO:0007286 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0000381 InterPro:IPR022967 SMART:SM00316
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN EMBL:BT044222
RefSeq:NP_610928.1 UniGene:Dm.12451 SMR:A1Z9L3 STRING:A1Z9L3
EnsemblMetazoa:FBtr0087518 GeneID:36561 KEGG:dme:Dmel_CG8241
UCSC:CG8241-RA CTD:36561 FlyBase:FBgn0086895 InParanoid:A1Z9L3
OrthoDB:EOG437PVS GenomeRNAi:36561 NextBio:799212 Uniprot:A1Z9L3
Length = 1242
Score = 545 (196.9 bits), Expect = 7.2e-78, Sum P(2) = 7.2e-78
Identities = 143/409 (34%), Positives = 221/409 (54%)
Query: 534 EQIDLGLVESTIEYICRHEGDGAILVFLTGWNDISKLLDQIKVN-KFLG-DPNKFLVLPL 591
+ +D L+ T+ I E G IL+FLTG +I + + K LG D + ++LP+
Sbjct: 776 DYLDASLI--TVMQIHLREPPGDILLFLTGQEEIDTACEILYERMKSLGPDVPELIILPV 833
Query: 592 HGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLA 651
+ ++P+ Q IFD P RK+V+ATNIAE+S+TID + YVVD G K+ Y++ +
Sbjct: 834 YSALPSEMQTRIFDPAPAGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMD 893
Query: 652 CLLPSWISKASAHQRRGRAGRVQPGVCYKLYP-RIIHDAMLPYQLPEILRTPLQELCLHI 710
L+ + IS+A+A QR GRAGR PG Y+LY R D MLP +PEI RT L L +
Sbjct: 894 SLVVTPISQAAAKQRAGRAGRTGPGKTYRLYTERAYRDEMLPTPVPEIQRTNLATTVLQL 953
Query: 711 KSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIG 770
K++ + + F P + L + A+E L ++ ALDD LT LGR + P++PN+
Sbjct: 954 KTMGINDLLHFDFMDAPPVESLVM--ALEQLHSLSALDDEGLLTRLGRRMAEFPLEPNLS 1011
Query: 771 KMLLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAF 830
KML+M QC + LTI + L+ +N F P + Q D+ K F + DH+ LL +
Sbjct: 1012 KMLIMSVALQCSDEILTIVSMLSVQNVFYRPKDKQALADQKKAKF-NQAEGDHLTLLAVY 1070
Query: 831 DGYKDAKRNRRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYSH 890
+ +K+ N+ +C+ENF+ TL+ +D+R Q L G +D+ K + +
Sbjct: 1071 NSWKN---NKFSNAWCYENFVQIRTLKRSQDVRKQLL------GIMDRHK-LDVVSAGKN 1120
Query: 891 DLEMVCAILCAGLYPNVVQCKRKGKRAVFYTKEVGQVA-LHPSSVNANQ 938
+ + AI C+G + N +K + + T QV +HPSS N+
Sbjct: 1121 SVRIQKAI-CSGFFRNAA---KKDPQEGYRTLVDSQVVYIHPSSALFNR 1165
Score = 324 (119.1 bits), Expect = 7.2e-78, Sum P(2) = 7.2e-78
Identities = 89/282 (31%), Positives = 142/282 (50%)
Query: 195 LQMSIETERRVGNLLNSSQG--NVP--VNDSGIESSEVARRPKLSVKVAN-TISPPQSDS 249
+Q ++ ERR +L Q +P +N + I+ L+ + +PP+
Sbjct: 499 MQSALSKERREQKMLQREQEIEAMPTSLNKNWIDPLPEDESRSLAANMRGMAAAPPEVPE 558
Query: 250 AKERLNVILKERQEKLKSSDSGKAMLSFREKLPAFKMKAEFLKAVAENQVLVVSGETGCG 309
K+ +VI ++ K +D ++ R+ LP +K++ + +KAV +NQ+L+V GETG G
Sbjct: 559 WKK--HVIGGKKSSFGKKTDL--TLVEQRQSLPIYKLRDDLIKAVTDNQILIVIGETGSG 614
Query: 310 KTTQLPQFILEEELSSLRGADCNIICTQPXXXXXXXXXXXXXXERGENLGETVGYQIRLE 369
KTTQ+ Q++ E ++ RG I CTQP E G LG+ VGY IR E
Sbjct: 615 KTTQITQYLGECGFTA-RG---KIGCTQPRRVAAMSVAKRVAEEYGCRLGQEVGYTIRFE 670
Query: 370 SKRSAQTRLLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXX 429
S +T + + T G+LLR+ + + +L S +++DE HER ++ D
Sbjct: 671 DCTSPETIIKYMTDGMLLRECLMEAELKSYSVIMLDEAHERTIHTDVLFGLLKTAVQKRP 730
Query: 430 XXXXXXMSATINADLFSKYFGNAPTVHIPGLTFPVTDLFLED 471
SAT++A FS+YF AP IPG TFPV L+ ++
Sbjct: 731 ELKLIVTSATLDAVKFSQYFFKAPIFTIPGRTFPVEVLYTKE 772
Score = 120 (47.3 bits), Expect = 4.8e-32, Sum P(2) = 4.8e-32
Identities = 43/165 (26%), Positives = 80/165 (48%)
Query: 810 EAKRSFAGDSCSDHIALLKAFDGYKDAKRNRRERDFCWENFLSPITLQMMEDMRSQFLDL 869
+ K++ + DH+ LL ++ +K+ N+ +C+ENF+ TL+ +D+R Q L
Sbjct: 1050 DQKKAKFNQAEGDHLTLLAVYNSWKN---NKFSNAWCYENFVQIRTLKRSQDVRKQLL-- 1104
Query: 870 LSDIGFVDKSKGPSAYNRYSHDLEMVCAILCAGLYPNVVQCKRKGKRAVFYTKEVGQVA- 928
G +D+ K + + + + AI C+G + N +K + + T QV
Sbjct: 1105 ----GIMDRHK-LDVVSAGKNSVRIQKAI-CSGFFRNAA---KKDPQEGYRTLVDSQVVY 1155
Query: 929 LHPSSVNANQNNFPLPYMVYSEMVKTNNINVYDSTNISEYALLLF 973
+HPSS N+ P +++Y E+V+T + + T I L+ F
Sbjct: 1156 IHPSSALFNRQ--P-EWVIYHELVQTTKEYMREVTTIDPKWLVEF 1197
Score = 38 (18.4 bits), Expect = 9.4e-48, Sum P(2) = 9.4e-48
Identities = 23/97 (23%), Positives = 38/97 (39%)
Query: 186 ERHGSTEKELQMS-IETERRVGNLLNSSQGNVPVNDSGIESSEVARRPKLSVKVANTISP 244
E+H T K+ MS ++ L +G V SS + + + S
Sbjct: 130 EKHSETHKKTDMSDVDAAMMELEALAPGEGATLVRPHKEVSSRDRHKRRSRDRDTKRRSR 189
Query: 245 PQSD--SAKERLNVILKERQEKLKSSDSGKAMLSFRE 279
+ D S + R KER+ + +S D+ + S RE
Sbjct: 190 SREDRHSDRRRSRSRDKERRRRSRSRDNRRRSRS-RE 225
>UNIPROTKB|F1NHI3 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005689 "U12-type spliceosomal complex"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
GO:GO:0005689 EMBL:AADN02015408 EMBL:AADN02015409 EMBL:AADN02015410
IPI:IPI00577528 Ensembl:ENSGALT00000023259 Uniprot:F1NHI3
Length = 762
Score = 549 (198.3 bits), Expect = 7.2e-78, Sum P(2) = 7.2e-78
Identities = 141/435 (32%), Positives = 231/435 (53%)
Query: 541 VESTIE-YICRHEGDGAILVFLTGWNDISKLLDQIK--VNKFLGDPNKFLVLPLHGSMPT 597
+ + I+ ++C E +G +L+FLTG +I + +IK ++ + ++PL+ ++P
Sbjct: 303 IRTVIQIHMCEEE-EGDLLLFLTGQEEIDEACKRIKREIDDLGPEVGDIKIIPLYSTLPP 361
Query: 598 INQREIFDRPPPNK------RKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLA 651
Q+ IF+ PPP K RK+V++TNIAE+S+TID VV+V+D G AK+ Y+ ++
Sbjct: 362 QQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVE 421
Query: 652 CLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDA-MLPYQLPEILRTPLQELCLHI 710
LL + ISKASA QR GRAGR +PG C++LY + M PEILR+ L + L +
Sbjct: 422 SLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQL 481
Query: 711 KSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIG 770
K L + + F + PP P + A+ELL + AL+D +LT LG + P+DP +
Sbjct: 482 KKLGIDDLVHF--DFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLA 539
Query: 771 KMLLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAF 830
KM++ + C N L+I A L+ FV P +K DEAK FA DH+ LL +
Sbjct: 540 KMVIASCDYNCSNEVLSITAMLSVPQCFVRPTEAKKAADEAKMRFAHID-GDHLTLLNVY 598
Query: 831 DGYKDAKRNRRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYSH 890
+K +N +C++NF++ +L +++R Q ++ +S ++ + Y +
Sbjct: 599 HAFK---QNHESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYIN 655
Query: 891 DLEMVCAILCAGLYPNVVQCKRKGKRAVFYTKEVGQVALHPSSVNANQNNFPLPYMVYSE 950
+ L G + V +R G +V V LHPS+V ++ P +++Y+E
Sbjct: 656 ----IRKALVTGYFMQVAHLERTGHYLTVKDNQV--VQLHPSTVLDHK---P-EWVLYNE 705
Query: 951 MVKTNNINVYDSTNI 965
V T + T+I
Sbjct: 706 FVLTTKNYIRTCTDI 720
Score = 292 (107.8 bits), Expect = 7.2e-78, Sum P(2) = 7.2e-78
Identities = 70/195 (35%), Positives = 98/195 (50%)
Query: 274 MLSFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNI 333
+L R +LP ++ K F + +Q V+ GETG GKTTQ+PQ+ ++ + SL G +
Sbjct: 97 ILKKRLQLPVWEYKERFTDILIRHQSFVLVGETGSGKTTQIPQWCVDY-MRSLPGPKRGV 155
Query: 334 ICTQPXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVED 393
CTQP E LG+ VGY IR E SA+T L + T G+LLR+ + D
Sbjct: 156 ACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMND 215
Query: 394 PDLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGNAP 453
P L +++DE HER + D MSAT++A F YF N P
Sbjct: 216 PLLERYGVIILDEAHERTLATDILMGVLKEVVRQRADLKVIVMSATLDAGKFQIYFDNCP 275
Query: 454 TVHIPGLTFPVTDLF 468
+ IPG T PV ++F
Sbjct: 276 LLTIPGRTHPV-EIF 289
>TAIR|locus:2033723 [details] [associations]
symbol:ESP3 "ENHANCED SILENCING PHENOTYPE 3" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=NAS] [GO:0008380 "RNA splicing" evidence=NAS]
[GO:0035194 "posttranscriptional gene silencing by RNA"
evidence=IMP] [GO:0016020 "membrane" evidence=IDA] [GO:0006306 "DNA
methylation" evidence=RCA] [GO:0006342 "chromatin silencing"
evidence=RCA] [GO:0007267 "cell-cell signaling" evidence=RCA]
[GO:0009616 "virus induced gene silencing" evidence=RCA]
[GO:0010267 "production of ta-siRNAs involved in RNA interference"
evidence=RCA] [GO:0035196 "production of miRNAs involved in gene
silencing by miRNA" evidence=RCA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0008380 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 GO:GO:0035194 OMA:GTLHREF EMBL:AY074318 EMBL:AY133872
IPI:IPI00543041 RefSeq:NP_174527.2 UniGene:At.40132
ProteinModelPortal:Q8VY00 IntAct:Q8VY00 PaxDb:Q8VY00 PRIDE:Q8VY00
EnsemblPlants:AT1G32490.1 GeneID:840143 KEGG:ath:AT1G32490
TAIR:At1g32490 InParanoid:Q8VY00 PhylomeDB:Q8VY00
ProtClustDB:CLSN2685836 ArrayExpress:Q8VY00 Genevestigator:Q8VY00
Uniprot:Q8VY00
Length = 1044
Score = 529 (191.3 bits), Expect = 7.4e-78, Sum P(2) = 7.4e-78
Identities = 148/428 (34%), Positives = 236/428 (55%)
Query: 533 AEQIDLGLVESTIEYICRHEGDGAILVFLTGWNDISKLLDQIKVN-KFLGDPNKFLVL-P 590
A+ +D +V TI I E G ILVF TG +I + +K + LG + L++ P
Sbjct: 593 ADYMDAAIV--TILTIHVREPLGDILVFFTGQEEIETAEEILKHRIRGLGTKIRELIICP 650
Query: 591 LHGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKL 650
++ ++P+ Q +IF+ P RK+VLATNIAE+S+TID + YVVD G +K SY+ +
Sbjct: 651 IYANLPSELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVVDPGFSKMKSYNPRTGM 710
Query: 651 ACLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQ-LPEILRTPLQELCLH 709
LL + ISKASA QR GRAGR PG CY+LY ++ L +PE+ RT L + L
Sbjct: 711 ESLLITPISKASATQRAGRAGRTSPGKCYRLYTAFNYNNDLEENTVPEVQRTNLASVVLA 770
Query: 710 IKSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNI 769
+KSL + + +F + PP A+ ++ELL +GAL+ + LT GR + P+DP +
Sbjct: 771 LKSLGIHDLINF--DFMDPPPAEALVKSLELLFALGALNKLGELTKAGRRMAEFPLDPML 828
Query: 770 GKMLLMGAIFQCLNPALTIAAALAHRNP-FVLPVNMQKEVDEAKRSFAGDSCSDHIALLK 828
KM+++ ++C + ++IAA L+ F P + Q D A+ +F + DHIALLK
Sbjct: 829 SKMIVVSDKYKCSDEIISIAAMLSIGGSIFYRPKDKQVHADNARMNFHTGNVGDHIALLK 888
Query: 829 AFDGYKDAKRNRRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRY 888
+ +K+ + + +C+EN++ +++ D+R Q LL + +D S S N
Sbjct: 889 VYSSWKETNFSTQ---WCYENYIQVRSMKRARDIRDQLEGLLERVE-IDIS---SNLN-- 939
Query: 889 SHDLEMVCAILCAGLYPNVVQCKRKGK-RAVFYTKEVGQVALHPSSVNANQNNFPLPYMV 947
+L+ V + AG +P+ + ++ G R V K V +HP+S +Q P ++V
Sbjct: 940 --ELDSVRKSIVAGFFPHTAKLQKNGSYRTV---KHPQTVHIHPNS-GLSQV-LPR-WVV 991
Query: 948 YSEMVKTN 955
Y E+V T+
Sbjct: 992 YHELVLTS 999
Score = 337 (123.7 bits), Expect = 7.4e-78, Sum P(2) = 7.4e-78
Identities = 111/386 (28%), Positives = 171/386 (44%)
Query: 98 DPVWRAERL-RQQAAEMEVFDQNEWWGKLEQMKRGEEQEMIIKRKFSRADQQTLADMAHQ 156
+ V RA L + + + E+ K EQ K E ++ I ++ ++ +
Sbjct: 205 EAVRRANALEKDDLYSLRKVSRQEYLKKREQKKLDELRDEIEDEQYLFGGEKLTETELRE 264
Query: 157 LGLHFHAYNKGKALAVSKVPLPMYR-PDLDERHGSTEKELQMSIETERRVGNLLNSSQGN 215
Y+ K + + YR PD ++ G ++E + S+ +R +L ++ + N
Sbjct: 265 FRYKKELYDLVKKRTQDEDNVEEYRIPDAYDQEGGVDQEKRFSVAVQR-YRDLDSTEKMN 323
Query: 216 VPVNDSGIESSEVARRP-KLSVKVANT------ISPPQSDSAKERLNVILKERQE----- 263
E ++ + K K + Q + KE +V+ E E
Sbjct: 324 PFAEQEAWEDHQIGKATLKFGAKNKQASDDYQFVFEDQINFIKE--SVMAGENYEDAMDA 381
Query: 264 KLKSSD-SGKAMLS----FREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFI 318
K KS D + K L R LP + + + LKAV E+QVLV+ G+TG GKTTQ+PQ++
Sbjct: 382 KQKSQDLAEKTALEELQEVRRSLPIYTYRDQLLKAVEEHQVLVIVGDTGSGKTTQIPQYL 441
Query: 319 LEEELSSLRGADCNIICTQPXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRL 378
E + RG + CTQP E G LG VGY IR E S +T L
Sbjct: 442 HEAGYTK-RG---KVGCTQPRRVAAMSVAARVAQEMGVKLGHEVGYSIRFEDCTSDKTVL 497
Query: 379 LFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSA 438
+ T G+LLR+L+ +PDL+ S ++VDE HER ++ D SA
Sbjct: 498 KYMTDGMLLRELLGEPDLASYSVVIVDEAHERTLSTDILFGLVKDIARFRPDLKLLISSA 557
Query: 439 TINADLFSKYFGNAPTVHIPGLTFPV 464
T++A+ FS YF AP PG +PV
Sbjct: 558 TMDAEKFSDYFDTAPIFSFPGRRYPV 583
Score = 42 (19.8 bits), Expect = 1.5e-25, Sum P(2) = 1.5e-25
Identities = 13/31 (41%), Positives = 17/31 (54%)
Query: 501 KDHLTALFEDVDID-SNYKNYRASTRASLEA 530
+D L L E V+ID S+ N S R S+ A
Sbjct: 920 RDQLEGLLERVEIDISSNLNELDSVRKSIVA 950
>GENEDB_PFALCIPARUM|PF10_0294 [details] [associations]
symbol:PF10_0294 "RNA helicase, putative"
species:5833 "Plasmodium falciparum" [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0008380 "RNA splicing"
evidence=ISS] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008380 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:AE014185 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
HSSP:P05055 RefSeq:XP_001347578.1 ProteinModelPortal:Q8IJA4
IntAct:Q8IJA4 MINT:MINT-1724156 EnsemblProtists:PF10_0294:mRNA
GeneID:810451 KEGG:pfa:PF10_0294 EuPathDB:PlasmoDB:PF3D7_1030100
OMA:HRHSKEH ProtClustDB:CLSZ2433181 Uniprot:Q8IJA4
Length = 1290
Score = 566 (204.3 bits), Expect = 7.5e-78, Sum P(2) = 7.5e-78
Identities = 152/455 (33%), Positives = 239/455 (52%)
Query: 533 AEQIDLGLVESTIEYICRHEGDGAILVFLTGWNDISKLLDQI--KVNKFLG-DPNKFLVL 589
++ ++ L+ ++ H GD ILVFLTG ++I+ + + ++ K P ++L
Sbjct: 820 SDYVEASLITVLNIHLNEHPGD--ILVFLTGQDEINTACEILHERMKKLESMSPPPLIIL 877
Query: 590 PLHGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNK 649
P++ S+P+ Q IF+ PP RK +LATNIAE+S+TID + +V+D G K YD+
Sbjct: 878 PIYSSLPSEMQSVIFEPAPPGCRKCILATNIAEASLTIDGIFFVIDPGFCKIKKYDSKRD 937
Query: 650 LACLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIH-DAMLPYQLPEILRTPLQELCL 708
+ L+ + ISKA+A QR GRAGR PG CY+LY + + M +PEI R L + L
Sbjct: 938 MDSLIVAPISKANAKQRAGRAGRTGPGKCYRLYTEEAYKNEMSEMSVPEIQRINLGSIVL 997
Query: 709 HIKSLQLGTVGSFLS-KALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDP 767
+K+L G + FL + P + +++E L +GALDD LT LG+ + P++P
Sbjct: 998 LLKAL--G-INDFLHFDFMDSPSVETLIHSLENLYYLGALDDNGYLTKLGKKMANFPMEP 1054
Query: 768 NIGKMLLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALL 827
N+ K+LL F C + +TI + L+ +N F P N D+ K F D I L
Sbjct: 1055 NLSKILLTSLNFNCTDDVVTIVSMLSVQNIFYRPQNKALLADKKKNKFIMPQ-GDLITYL 1113
Query: 828 KAFDGYKDAKRNRRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGF-VDKSKGPSAYN 886
++ +K+ N +C ENF+ L+ +D+R Q L + + V KS +
Sbjct: 1114 NIYNKWKE---NSFSNYWCHENFIQSRALKRAQDVRKQMLSIFEKYNYQVKKSTSKNDAT 1170
Query: 887 RYSHDLEMVCAILCAGLYPNVVQCKRKGKRAVFYTKEVGQVALHPSSVNANQNNFPLPYM 946
+Y + +C +C+G + +V CKR ++ QV +HPSS N+N PL ++
Sbjct: 1171 KYVN----ICKSICSGYFNHV--CKRDTQQGYTTLLTNQQVFIHPSSTLFNKN--PL-FV 1221
Query: 947 VYSEMVKTNNINVYDSTNISEYALLLFGGNL-IPS 980
VY E+V TN + D T I L+ NL IP+
Sbjct: 1222 VYHELVLTNKEYIRDCTIIQPQWLIQLAPNLFIPA 1256
Score = 302 (111.4 bits), Expect = 7.5e-78, Sum P(2) = 7.5e-78
Identities = 69/187 (36%), Positives = 99/187 (52%)
Query: 278 REKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQ 337
R KLP + +K + +KA+ +N VL+V GETG GKTTQ+PQ++ E + +G + CTQ
Sbjct: 628 RSKLPIYNLKNDLMKAIEKNNVLIVIGETGSGKTTQIPQYLHEANYTE-KGI---VGCTQ 683
Query: 338 PXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVEDPDLS 397
P E G LG+ VGY IR + S T + + T G+LLR+ + D L+
Sbjct: 684 PRRVAAMSIAKRVSEEFGCILGQEVGYSIRFDDCTSNDTIIKYLTDGMLLRETLSDTLLT 743
Query: 398 CVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGNAPTVHI 457
S +++DE HER ++ D SAT++A+ FS YF N+P I
Sbjct: 744 KYSFIILDEAHERTISTDILFCLLKDVVRKRADFKLIVTSATLDAEKFSTYFFNSPIFTI 803
Query: 458 PGLTFPV 464
PG FPV
Sbjct: 804 PGKIFPV 810
Score = 46 (21.3 bits), Expect = 6.9e-51, Sum P(2) = 6.9e-51
Identities = 9/35 (25%), Positives = 19/35 (54%)
Query: 482 SKLDSFQGNXXXXXXQDSKKDHLTALFEDVDIDSN 516
S++D G + ++D+ +LF+D++ D N
Sbjct: 401 SEVDQKTGKNLVNDDMNKEEDNYISLFDDINEDFN 435
Score = 40 (19.1 bits), Expect = 2.9e-50, Sum P(2) = 2.9e-50
Identities = 12/38 (31%), Positives = 16/38 (42%)
Query: 466 DLFLEDVLEKTRYKMNSKLDSFQGNXXXXXXQDSKKDH 503
DL +K R K NS S + +D KKD+
Sbjct: 171 DLSDSSYQKKRRKKKNSSGGSSKNTESSFETKDIKKDN 208
>UNIPROTKB|Q8IJA4 [details] [associations]
symbol:PF10_0294 "RNA helicase, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008380 "RNA splicing" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008380 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:AE014185 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
HSSP:P05055 RefSeq:XP_001347578.1 ProteinModelPortal:Q8IJA4
IntAct:Q8IJA4 MINT:MINT-1724156 EnsemblProtists:PF10_0294:mRNA
GeneID:810451 KEGG:pfa:PF10_0294 EuPathDB:PlasmoDB:PF3D7_1030100
OMA:HRHSKEH ProtClustDB:CLSZ2433181 Uniprot:Q8IJA4
Length = 1290
Score = 566 (204.3 bits), Expect = 7.5e-78, Sum P(2) = 7.5e-78
Identities = 152/455 (33%), Positives = 239/455 (52%)
Query: 533 AEQIDLGLVESTIEYICRHEGDGAILVFLTGWNDISKLLDQI--KVNKFLG-DPNKFLVL 589
++ ++ L+ ++ H GD ILVFLTG ++I+ + + ++ K P ++L
Sbjct: 820 SDYVEASLITVLNIHLNEHPGD--ILVFLTGQDEINTACEILHERMKKLESMSPPPLIIL 877
Query: 590 PLHGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNK 649
P++ S+P+ Q IF+ PP RK +LATNIAE+S+TID + +V+D G K YD+
Sbjct: 878 PIYSSLPSEMQSVIFEPAPPGCRKCILATNIAEASLTIDGIFFVIDPGFCKIKKYDSKRD 937
Query: 650 LACLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIH-DAMLPYQLPEILRTPLQELCL 708
+ L+ + ISKA+A QR GRAGR PG CY+LY + + M +PEI R L + L
Sbjct: 938 MDSLIVAPISKANAKQRAGRAGRTGPGKCYRLYTEEAYKNEMSEMSVPEIQRINLGSIVL 997
Query: 709 HIKSLQLGTVGSFLS-KALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDP 767
+K+L G + FL + P + +++E L +GALDD LT LG+ + P++P
Sbjct: 998 LLKAL--G-INDFLHFDFMDSPSVETLIHSLENLYYLGALDDNGYLTKLGKKMANFPMEP 1054
Query: 768 NIGKMLLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALL 827
N+ K+LL F C + +TI + L+ +N F P N D+ K F D I L
Sbjct: 1055 NLSKILLTSLNFNCTDDVVTIVSMLSVQNIFYRPQNKALLADKKKNKFIMPQ-GDLITYL 1113
Query: 828 KAFDGYKDAKRNRRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGF-VDKSKGPSAYN 886
++ +K+ N +C ENF+ L+ +D+R Q L + + V KS +
Sbjct: 1114 NIYNKWKE---NSFSNYWCHENFIQSRALKRAQDVRKQMLSIFEKYNYQVKKSTSKNDAT 1170
Query: 887 RYSHDLEMVCAILCAGLYPNVVQCKRKGKRAVFYTKEVGQVALHPSSVNANQNNFPLPYM 946
+Y + +C +C+G + +V CKR ++ QV +HPSS N+N PL ++
Sbjct: 1171 KYVN----ICKSICSGYFNHV--CKRDTQQGYTTLLTNQQVFIHPSSTLFNKN--PL-FV 1221
Query: 947 VYSEMVKTNNINVYDSTNISEYALLLFGGNL-IPS 980
VY E+V TN + D T I L+ NL IP+
Sbjct: 1222 VYHELVLTNKEYIRDCTIIQPQWLIQLAPNLFIPA 1256
Score = 302 (111.4 bits), Expect = 7.5e-78, Sum P(2) = 7.5e-78
Identities = 69/187 (36%), Positives = 99/187 (52%)
Query: 278 REKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQ 337
R KLP + +K + +KA+ +N VL+V GETG GKTTQ+PQ++ E + +G + CTQ
Sbjct: 628 RSKLPIYNLKNDLMKAIEKNNVLIVIGETGSGKTTQIPQYLHEANYTE-KGI---VGCTQ 683
Query: 338 PXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVEDPDLS 397
P E G LG+ VGY IR + S T + + T G+LLR+ + D L+
Sbjct: 684 PRRVAAMSIAKRVSEEFGCILGQEVGYSIRFDDCTSNDTIIKYLTDGMLLRETLSDTLLT 743
Query: 398 CVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGNAPTVHI 457
S +++DE HER ++ D SAT++A+ FS YF N+P I
Sbjct: 744 KYSFIILDEAHERTISTDILFCLLKDVVRKRADFKLIVTSATLDAEKFSTYFFNSPIFTI 803
Query: 458 PGLTFPV 464
PG FPV
Sbjct: 804 PGKIFPV 810
Score = 46 (21.3 bits), Expect = 6.9e-51, Sum P(2) = 6.9e-51
Identities = 9/35 (25%), Positives = 19/35 (54%)
Query: 482 SKLDSFQGNXXXXXXQDSKKDHLTALFEDVDIDSN 516
S++D G + ++D+ +LF+D++ D N
Sbjct: 401 SEVDQKTGKNLVNDDMNKEEDNYISLFDDINEDFN 435
Score = 40 (19.1 bits), Expect = 2.9e-50, Sum P(2) = 2.9e-50
Identities = 12/38 (31%), Positives = 16/38 (42%)
Query: 466 DLFLEDVLEKTRYKMNSKLDSFQGNXXXXXXQDSKKDH 503
DL +K R K NS S + +D KKD+
Sbjct: 171 DLSDSSYQKKRRKKKNSSGGSSKNTESSFETKDIKKDN 208
>UNIPROTKB|F1S1H3 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN CTD:1659 EMBL:FP102477 RefSeq:XP_003131427.2
Ensembl:ENSSSCT00000018917 GeneID:100517118 KEGG:ssc:100517118
Uniprot:F1S1H3
Length = 1212
Score = 538 (194.4 bits), Expect = 2.0e-77, Sum P(3) = 2.0e-77
Identities = 151/446 (33%), Positives = 232/446 (52%)
Query: 534 EQIDLGLVESTIEYICRHEGDGAILVFLTGWNDISKLLDQIKVN-KFLG-DPNKFLVLPL 591
+ +D L+ T+ I E G ILVFLTG +I + + K LG D + ++LP+
Sbjct: 747 DYLDASLI--TVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPV 804
Query: 592 HGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLA 651
+ ++P+ Q IFD PP RK+V+ATNIAE+S+TID + YVVD G K+ Y++ +
Sbjct: 805 YSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGID 864
Query: 652 CLLPSWISKASAHQRRGRAGRVQPGVCYKLYP-RIIHDAMLPYQLPEILRTPLQELCLHI 710
L+ + IS+A A QR GRAGR PG CY+LY R D ML +PEI RT L L +
Sbjct: 865 QLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSL 924
Query: 711 KSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIG 770
K++ + + SF P + L A+E L T+GALDD LT LGR + P++P +
Sbjct: 925 KAMGINDLLSFDFMDAPPMETLIT--AMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLC 982
Query: 771 KMLLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAF 830
KML+M C LTI + L+ +N F P + Q D+ K F DH+ LL +
Sbjct: 983 KMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQTE-GDHLTLLAVY 1041
Query: 831 DGYKDAKRNRRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYSH 890
+ +K+ N+ +C+ENF+ +L+ +D+R Q L G +D+ K +
Sbjct: 1042 NSWKN---NKFSNPWCYENFIQARSLRRAQDIRKQML------GIMDRHK-LDVVSCGKS 1091
Query: 891 DLEMVCAILCAGLYPNVVQCK-RKGKRAVFYTKEVGQVALHPSSVNANQNNFPLPY--MV 947
+ + AI C+G + N + ++G R + ++V V +HPSS N+ + Y +V
Sbjct: 1092 TVRVQKAI-CSGFFRNAAKKDPQEGYRTLI-DQQV--VYIHPSSALFNRQPEWVVYHELV 1147
Query: 948 YSEMVKTNNINVYDSTNISEYALLLF 973
+ + D + E+A F
Sbjct: 1148 LTTKEYMREVTTIDPRWLVEFAPAFF 1173
Score = 329 (120.9 bits), Expect = 2.0e-77, Sum P(3) = 2.0e-77
Identities = 79/209 (37%), Positives = 114/209 (54%)
Query: 266 KSSDSGKAMLSF---REKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEE 322
K+S K +S RE LP +K+K + ++AV +NQ+L+V GETG GKTTQ+ Q++ E
Sbjct: 539 KASYGKKTQMSIIEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAG 598
Query: 323 LSSLRGADCNIICTQPXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLLFCT 382
+S RG I CTQP E G LG+ VGY IR E S +T + + T
Sbjct: 599 YTS-RG---KIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMT 654
Query: 383 TGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINA 442
G+LLR+ + DPDL+ + +++DE HER ++ D SAT++A
Sbjct: 655 DGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDA 714
Query: 443 DLFSKYFGNAPTVHIPGLTFPVTDLFLED 471
FS+YF AP IPG T+PV L+ ++
Sbjct: 715 VKFSQYFYEAPIFTIPGRTYPVEILYTKE 743
Score = 54 (24.1 bits), Expect = 1.0e-48, Sum P(2) = 1.0e-48
Identities = 23/108 (21%), Positives = 44/108 (40%)
Query: 191 TEKELQMSIETERRVGNLLNSSQGNVPVNDSGIESSEVARRPKLSVKVANTISPPQSDSA 250
T+ L M + ++ G LN ++ V ++ E+S R P ++ +P D +
Sbjct: 321 TKTSLSMK-DVDQETGEDLNPNRRRNLVGETNEETS--MRNPDRPTHLSLVSAPEVEDDS 377
Query: 251 KERLNVILKERQEKLKSSDSGKAMLSFREKLPAFKMKAEFLKAVAENQ 298
ER + EK + A + +E+ P F + L V + +
Sbjct: 378 LERKRLTRISDPEKWEIKQMIAANVLSKEEFPDFDEETGILPKVDDEE 425
Score = 44 (20.5 bits), Expect = 2.0e-77, Sum P(3) = 2.0e-77
Identities = 17/84 (20%), Positives = 36/84 (42%)
Query: 183 DLDERHGSTEKELQMSIETERRVGNLLNSSQGNVPVNDSGIESSEVARRPKLSVKVANTI 242
+LD G +K+L + + ++ + ++ N + S ++ +++ T+
Sbjct: 37 ELDNHLGINDKDLAEFVISLAEKNTTFDTFKASLVKNGAEFTDSLISNL----LRLIQTM 92
Query: 243 SPPQSDSAKERLNVILKERQEKLK 266
PP S + V K +EKLK
Sbjct: 93 RPPAKPSTSKDPVVKPKTEKEKLK 116
>UNIPROTKB|F1MEM4 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
OMA:NAWCYEN EMBL:DAAA02049231 EMBL:DAAA02049230 IPI:IPI00695401
Ensembl:ENSBTAT00000010976 Uniprot:F1MEM4
Length = 1230
Score = 538 (194.4 bits), Expect = 2.2e-77, Sum P(3) = 2.2e-77
Identities = 151/446 (33%), Positives = 232/446 (52%)
Query: 534 EQIDLGLVESTIEYICRHEGDGAILVFLTGWNDISKLLDQIKVN-KFLG-DPNKFLVLPL 591
+ +D L+ T+ I E G ILVFLTG +I + + K LG D + ++LP+
Sbjct: 765 DYLDASLI--TVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPV 822
Query: 592 HGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLA 651
+ ++P+ Q IFD PP RK+V+ATNIAE+S+TID + YVVD G K+ Y++ +
Sbjct: 823 YSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGID 882
Query: 652 CLLPSWISKASAHQRRGRAGRVQPGVCYKLYP-RIIHDAMLPYQLPEILRTPLQELCLHI 710
L+ + IS+A A QR GRAGR PG CY+LY R D ML +PEI RT L L +
Sbjct: 883 QLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSL 942
Query: 711 KSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIG 770
K++ + + SF P + L A+E L T+GALDD LT LGR + P++P +
Sbjct: 943 KAMGINDLLSFDFMDAPPMETLIT--AMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLC 1000
Query: 771 KMLLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAF 830
KML+M C LTI + L+ +N F P + Q D+ K F DH+ LL +
Sbjct: 1001 KMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQTE-GDHLTLLAVY 1059
Query: 831 DGYKDAKRNRRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYSH 890
+ +K+ N+ +C+ENF+ +L+ +D+R Q L G +D+ K +
Sbjct: 1060 NSWKN---NKFSNPWCYENFIQARSLRRAQDIRKQML------GIMDRHK-LDVVSCGKS 1109
Query: 891 DLEMVCAILCAGLYPNVVQCK-RKGKRAVFYTKEVGQVALHPSSVNANQNNFPLPY--MV 947
+ + AI C+G + N + ++G R + ++V V +HPSS N+ + Y +V
Sbjct: 1110 TVRVQKAI-CSGFFRNAAKKDPQEGYRTLI-DQQV--VYIHPSSALFNRQPEWVVYHELV 1165
Query: 948 YSEMVKTNNINVYDSTNISEYALLLF 973
+ + D + E+A F
Sbjct: 1166 LTTKEYMREVTTIDPRWLVEFAPAFF 1191
Score = 329 (120.9 bits), Expect = 2.2e-77, Sum P(3) = 2.2e-77
Identities = 79/209 (37%), Positives = 114/209 (54%)
Query: 266 KSSDSGKAMLSF---REKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEE 322
K+S K +S RE LP +K+K + ++AV +NQ+L+V GETG GKTTQ+ Q++ E
Sbjct: 557 KASYGKKTQMSIIEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAG 616
Query: 323 LSSLRGADCNIICTQPXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLLFCT 382
+S RG I CTQP E G LG+ VGY IR E S +T + + T
Sbjct: 617 YTS-RG---KIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMT 672
Query: 383 TGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINA 442
G+LLR+ + DPDL+ + +++DE HER ++ D SAT++A
Sbjct: 673 DGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDA 732
Query: 443 DLFSKYFGNAPTVHIPGLTFPVTDLFLED 471
FS+YF AP IPG T+PV L+ ++
Sbjct: 733 VKFSQYFYEAPIFTIPGRTYPVEILYTKE 761
Score = 54 (24.1 bits), Expect = 1.1e-48, Sum P(2) = 1.1e-48
Identities = 23/108 (21%), Positives = 44/108 (40%)
Query: 191 TEKELQMSIETERRVGNLLNSSQGNVPVNDSGIESSEVARRPKLSVKVANTISPPQSDSA 250
T+ L M + ++ G LN ++ V ++ E+S R P ++ +P D +
Sbjct: 339 TKTSLSMK-DVDQETGEDLNPNRRRNLVGETNEETS--MRNPDRPTHLSLVSAPEVEDDS 395
Query: 251 KERLNVILKERQEKLKSSDSGKAMLSFREKLPAFKMKAEFLKAVAENQ 298
ER + EK + A + +E+ P F + L V + +
Sbjct: 396 LERKRLTRISDPEKWEIKQMIAANVLSKEEFPDFDEETGILPKVDDEE 443
Score = 44 (20.5 bits), Expect = 2.2e-77, Sum P(3) = 2.2e-77
Identities = 17/84 (20%), Positives = 36/84 (42%)
Query: 183 DLDERHGSTEKELQMSIETERRVGNLLNSSQGNVPVNDSGIESSEVARRPKLSVKVANTI 242
+LD G +K+L + + ++ + ++ N + S ++ +++ T+
Sbjct: 49 ELDNHLGINDKDLAEFVISLAEKNTTFDTFKASLVKNGAEFTDSLISNL----LRLIQTM 104
Query: 243 SPPQSDSAKERLNVILKERQEKLK 266
PP S + V K +EKLK
Sbjct: 105 RPPAKPSTSKDPVVKPKTEKEKLK 128
>UNIPROTKB|A5D7D9 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005689 "U12-type spliceosomal complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820
GeneTree:ENSGT00650000093246 OMA:TVLQIHA CTD:1665
HOVERGEN:HBG039428 OrthoDB:EOG4K6G3N GO:GO:0005689
EMBL:DAAA02017121 EMBL:BC140520 IPI:IPI00709068
RefSeq:NP_001091487.1 UniGene:Bt.58909 Ensembl:ENSBTAT00000011714
GeneID:512327 KEGG:bta:512327 InParanoid:A5D7D9 NextBio:20870343
Uniprot:A5D7D9
Length = 795
Score = 550 (198.7 bits), Expect = 2.2e-77, Sum P(2) = 2.2e-77
Identities = 142/435 (32%), Positives = 231/435 (53%)
Query: 541 VESTIE-YICRHEGDGAILVFLTGWNDISKLLDQIK--VNKFLGDPNKFLVLPLHGSMPT 597
+ + I+ ++C E +G +L+FLTG +I + +IK V+ + ++PL+ ++P
Sbjct: 336 IRTVIQIHMCEEE-EGDLLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPP 394
Query: 598 INQREIFDRPPPNK------RKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLA 651
Q+ IF+ PPP K RK+V++TNIAE+S+TID VV+V+D G AK+ Y+ ++
Sbjct: 395 QQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVE 454
Query: 652 CLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDA-MLPYQLPEILRTPLQELCLHI 710
LL + ISKASA QR GRAGR +PG C++LY + M PEILR+ L + L +
Sbjct: 455 SLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQL 514
Query: 711 KSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIG 770
K L + + F + PP P + A+ELL + AL+D +LT LG + P+DP +
Sbjct: 515 KKLGIDDLVHF--DFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLA 572
Query: 771 KMLLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAF 830
KM++ + C N L+I A L+ FV P +K DEAK FA DH+ LL +
Sbjct: 573 KMVIASCDYNCSNEVLSITAMLSVPQCFVRPTEAKKAADEAKMRFAHID-GDHLTLLNVY 631
Query: 831 DGYKDAKRNRRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYSH 890
+K +N +C++NF++ +L +++R Q ++ +S ++ + Y +
Sbjct: 632 HAFK---QNHESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYIN 688
Query: 891 DLEMVCAILCAGLYPNVVQCKRKGKRAVFYTKEVGQVALHPSSVNANQNNFPLPYMVYSE 950
+ L G + V +R G +V V LHPS+V ++ P +++Y+E
Sbjct: 689 ----IRKALVTGYFMQVAHLERTGHYLTVKDNQV--VQLHPSTVLDHK---P-EWVLYNE 738
Query: 951 MVKTNNINVYDSTNI 965
V T + T+I
Sbjct: 739 FVLTTKNYIRTCTDI 753
Score = 295 (108.9 bits), Expect = 2.2e-77, Sum P(2) = 2.2e-77
Identities = 71/195 (36%), Positives = 98/195 (50%)
Query: 274 MLSFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNI 333
+L R +LP ++ K F + +Q V+ GETG GKTTQ+PQ+ +E + SL G +
Sbjct: 130 ILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEY-MRSLPGPKRGV 188
Query: 334 ICTQPXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVED 393
CTQP E LG+ VGY IR E SA+T L + T G+LLR+ + D
Sbjct: 189 ACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMND 248
Query: 394 PDLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGNAP 453
P L +++DE HER + D MSAT++A F YF N P
Sbjct: 249 PLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCP 308
Query: 454 TVHIPGLTFPVTDLF 468
+ IPG T PV ++F
Sbjct: 309 LLTIPGRTHPV-EIF 322
>UNIPROTKB|E2R2U3 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005689 "U12-type spliceosomal complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
CTD:1665 GO:GO:0005689 EMBL:AAEX03002593 EMBL:AAEX03002594
RefSeq:XP_851535.1 Ensembl:ENSCAFT00000026155 GeneID:488856
KEGG:cfa:488856 NextBio:20862139 Uniprot:E2R2U3
Length = 795
Score = 550 (198.7 bits), Expect = 2.2e-77, Sum P(2) = 2.2e-77
Identities = 142/435 (32%), Positives = 231/435 (53%)
Query: 541 VESTIE-YICRHEGDGAILVFLTGWNDISKLLDQIK--VNKFLGDPNKFLVLPLHGSMPT 597
+ + I+ ++C E +G +L+FLTG +I + +IK V+ + ++PL+ ++P
Sbjct: 336 IRTVIQIHMCEEE-EGDLLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPP 394
Query: 598 INQREIFDRPPPNK------RKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLA 651
Q+ IF+ PPP K RK+V++TNIAE+S+TID VV+V+D G AK+ Y+ ++
Sbjct: 395 QQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVE 454
Query: 652 CLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDA-MLPYQLPEILRTPLQELCLHI 710
LL + ISKASA QR GRAGR +PG C++LY + M PEILR+ L + L +
Sbjct: 455 SLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQL 514
Query: 711 KSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIG 770
K L + + F + PP P + A+ELL + AL+D +LT LG + P+DP +
Sbjct: 515 KKLGIDDLVHF--DFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLA 572
Query: 771 KMLLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAF 830
KM++ + C N L+I A L+ FV P +K DEAK FA DH+ LL +
Sbjct: 573 KMVIASCDYNCSNEVLSITAMLSVPQCFVRPTEAKKAADEAKMRFAHID-GDHLTLLNVY 631
Query: 831 DGYKDAKRNRRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYSH 890
+K +N +C++NF++ +L +++R Q ++ +S ++ + Y +
Sbjct: 632 HAFK---QNHESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYIN 688
Query: 891 DLEMVCAILCAGLYPNVVQCKRKGKRAVFYTKEVGQVALHPSSVNANQNNFPLPYMVYSE 950
+ L G + V +R G +V V LHPS+V ++ P +++Y+E
Sbjct: 689 ----IRKALVTGYFMQVAHLERTGHYLTVKDNQV--VQLHPSTVLDHK---P-EWVLYNE 738
Query: 951 MVKTNNINVYDSTNI 965
V T + T+I
Sbjct: 739 FVLTTKNYIRTCTDI 753
Score = 295 (108.9 bits), Expect = 2.2e-77, Sum P(2) = 2.2e-77
Identities = 71/195 (36%), Positives = 98/195 (50%)
Query: 274 MLSFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNI 333
+L R +LP ++ K F + +Q V+ GETG GKTTQ+PQ+ +E + SL G +
Sbjct: 130 ILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEY-MRSLPGPKRGV 188
Query: 334 ICTQPXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVED 393
CTQP E LG+ VGY IR E SA+T L + T G+LLR+ + D
Sbjct: 189 ACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMND 248
Query: 394 PDLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGNAP 453
P L +++DE HER + D MSAT++A F YF N P
Sbjct: 249 PLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCP 308
Query: 454 TVHIPGLTFPVTDLF 468
+ IPG T PV ++F
Sbjct: 309 LLTIPGRTHPV-EIF 322
>UNIPROTKB|O43143 [details] [associations]
symbol:DHX15 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX15" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=TAS] [GO:0008380 "RNA splicing" evidence=IC]
[GO:0005689 "U12-type spliceosomal complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 EMBL:AB001636 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 GO:GO:0003724
KO:K12820 OMA:TVLQIHA EMBL:AF279891 EMBL:BC035974 IPI:IPI00396435
PIR:JC5785 RefSeq:NP_001349.2 UniGene:Hs.696074
ProteinModelPortal:O43143 SMR:O43143 DIP:DIP-38211N IntAct:O43143
MINT:MINT-5003827 STRING:O43143 PhosphoSite:O43143
SWISS-2DPAGE:O43143 PaxDb:O43143 PRIDE:O43143
Ensembl:ENST00000336812 GeneID:1665 KEGG:hsa:1665 UCSC:uc003gqx.3
CTD:1665 GeneCards:GC04M024519 HGNC:HGNC:2738 HPA:HPA047047
MIM:603403 neXtProt:NX_O43143 PharmGKB:PA27204 HOVERGEN:HBG039428
InParanoid:O43143 OrthoDB:EOG4K6G3N GenomeRNAi:1665 NextBio:6852
ArrayExpress:O43143 Bgee:O43143 CleanEx:HS_DHX15
Genevestigator:O43143 GermOnline:ENSG00000109606 GO:GO:0005689
Uniprot:O43143
Length = 795
Score = 550 (198.7 bits), Expect = 2.2e-77, Sum P(2) = 2.2e-77
Identities = 142/435 (32%), Positives = 231/435 (53%)
Query: 541 VESTIE-YICRHEGDGAILVFLTGWNDISKLLDQIK--VNKFLGDPNKFLVLPLHGSMPT 597
+ + I+ ++C E +G +L+FLTG +I + +IK V+ + ++PL+ ++P
Sbjct: 336 IRTVIQIHMCEEE-EGDLLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPP 394
Query: 598 INQREIFDRPPPNK------RKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLA 651
Q+ IF+ PPP K RK+V++TNIAE+S+TID VV+V+D G AK+ Y+ ++
Sbjct: 395 QQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVE 454
Query: 652 CLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDA-MLPYQLPEILRTPLQELCLHI 710
LL + ISKASA QR GRAGR +PG C++LY + M PEILR+ L + L +
Sbjct: 455 SLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQL 514
Query: 711 KSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIG 770
K L + + F + PP P + A+ELL + AL+D +LT LG + P+DP +
Sbjct: 515 KKLGIDDLVHF--DFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLA 572
Query: 771 KMLLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAF 830
KM++ + C N L+I A L+ FV P +K DEAK FA DH+ LL +
Sbjct: 573 KMVIASCDYNCSNEVLSITAMLSVPQCFVRPTEAKKAADEAKMRFAHID-GDHLTLLNVY 631
Query: 831 DGYKDAKRNRRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYSH 890
+K +N +C++NF++ +L +++R Q ++ +S ++ + Y +
Sbjct: 632 HAFK---QNHESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYIN 688
Query: 891 DLEMVCAILCAGLYPNVVQCKRKGKRAVFYTKEVGQVALHPSSVNANQNNFPLPYMVYSE 950
+ L G + V +R G +V V LHPS+V ++ P +++Y+E
Sbjct: 689 ----IRKALVTGYFMQVAHLERTGHYLTVKDNQV--VQLHPSTVLDHK---P-EWVLYNE 738
Query: 951 MVKTNNINVYDSTNI 965
V T + T+I
Sbjct: 739 FVLTTKNYIRTCTDI 753
Score = 295 (108.9 bits), Expect = 2.2e-77, Sum P(2) = 2.2e-77
Identities = 71/195 (36%), Positives = 98/195 (50%)
Query: 274 MLSFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNI 333
+L R +LP ++ K F + +Q V+ GETG GKTTQ+PQ+ +E + SL G +
Sbjct: 130 ILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEY-MRSLPGPKRGV 188
Query: 334 ICTQPXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVED 393
CTQP E LG+ VGY IR E SA+T L + T G+LLR+ + D
Sbjct: 189 ACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMND 248
Query: 394 PDLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGNAP 453
P L +++DE HER + D MSAT++A F YF N P
Sbjct: 249 PLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCP 308
Query: 454 TVHIPGLTFPVTDLF 468
+ IPG T PV ++F
Sbjct: 309 LLTIPGRTHPV-EIF 322
>UNIPROTKB|F1S5A8 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005689 "U12-type spliceosomal complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00650000093246 OMA:TVLQIHA GO:GO:0005689
EMBL:CU633303 Ensembl:ENSSSCT00000009580 Uniprot:F1S5A8
Length = 795
Score = 550 (198.7 bits), Expect = 2.2e-77, Sum P(2) = 2.2e-77
Identities = 142/435 (32%), Positives = 231/435 (53%)
Query: 541 VESTIE-YICRHEGDGAILVFLTGWNDISKLLDQIK--VNKFLGDPNKFLVLPLHGSMPT 597
+ + I+ ++C E +G +L+FLTG +I + +IK V+ + ++PL+ ++P
Sbjct: 336 IRTVIQIHMCEEE-EGDLLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPP 394
Query: 598 INQREIFDRPPPNK------RKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLA 651
Q+ IF+ PPP K RK+V++TNIAE+S+TID VV+V+D G AK+ Y+ ++
Sbjct: 395 QQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVE 454
Query: 652 CLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDA-MLPYQLPEILRTPLQELCLHI 710
LL + ISKASA QR GRAGR +PG C++LY + M PEILR+ L + L +
Sbjct: 455 SLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQL 514
Query: 711 KSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIG 770
K L + + F + PP P + A+ELL + AL+D +LT LG + P+DP +
Sbjct: 515 KKLGIDDLVHF--DFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLA 572
Query: 771 KMLLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAF 830
KM++ + C N L+I A L+ FV P +K DEAK FA DH+ LL +
Sbjct: 573 KMVIASCDYNCSNEVLSITAMLSVPQCFVRPTEAKKAADEAKMRFAHID-GDHLTLLNVY 631
Query: 831 DGYKDAKRNRRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYSH 890
+K +N +C++NF++ +L +++R Q ++ +S ++ + Y +
Sbjct: 632 HAFK---QNHESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYIN 688
Query: 891 DLEMVCAILCAGLYPNVVQCKRKGKRAVFYTKEVGQVALHPSSVNANQNNFPLPYMVYSE 950
+ L G + V +R G +V V LHPS+V ++ P +++Y+E
Sbjct: 689 ----IRKALVTGYFMQVAHLERTGHYLTVKDNQV--VQLHPSTVLDHK---P-EWVLYNE 738
Query: 951 MVKTNNINVYDSTNI 965
V T + T+I
Sbjct: 739 FVLTTKNYIRTCTDI 753
Score = 295 (108.9 bits), Expect = 2.2e-77, Sum P(2) = 2.2e-77
Identities = 71/195 (36%), Positives = 98/195 (50%)
Query: 274 MLSFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNI 333
+L R +LP ++ K F + +Q V+ GETG GKTTQ+PQ+ +E + SL G +
Sbjct: 130 ILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEY-MRSLPGPKRGV 188
Query: 334 ICTQPXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVED 393
CTQP E LG+ VGY IR E SA+T L + T G+LLR+ + D
Sbjct: 189 ACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMND 248
Query: 394 PDLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGNAP 453
P L +++DE HER + D MSAT++A F YF N P
Sbjct: 249 PLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCP 308
Query: 454 TVHIPGLTFPVTDLF 468
+ IPG T PV ++F
Sbjct: 309 LLTIPGRTHPV-EIF 322
>MGI|MGI:1099786 [details] [associations]
symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) box polypeptide 15"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005689 "U12-type spliceosomal complex" evidence=ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
MGI:MGI:1099786 GO:GO:0005524 GO:GO:0005730 GO:GO:0008380
GO:GO:0006397 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820 OMA:TVLQIHA CTD:1665
HOVERGEN:HBG039428 OrthoDB:EOG4K6G3N GO:GO:0005689 EMBL:AF017153
EMBL:BC003745 IPI:IPI00128818 RefSeq:NP_031865.2 UniGene:Mm.993
ProteinModelPortal:O35286 SMR:O35286 STRING:O35286
PhosphoSite:O35286 PaxDb:O35286 PRIDE:O35286
Ensembl:ENSMUST00000031061 GeneID:13204 KEGG:mmu:13204
InParanoid:O35286 NextBio:283358 Bgee:O35286 CleanEx:MM_DHX15
Genevestigator:O35286 GermOnline:ENSMUSG00000029169 Uniprot:O35286
Length = 795
Score = 550 (198.7 bits), Expect = 2.2e-77, Sum P(2) = 2.2e-77
Identities = 142/435 (32%), Positives = 231/435 (53%)
Query: 541 VESTIE-YICRHEGDGAILVFLTGWNDISKLLDQIK--VNKFLGDPNKFLVLPLHGSMPT 597
+ + I+ ++C E +G +L+FLTG +I + +IK V+ + ++PL+ ++P
Sbjct: 336 IRTVIQIHMCEEE-EGDLLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPP 394
Query: 598 INQREIFDRPPPNK------RKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLA 651
Q+ IF+ PPP K RK+V++TNIAE+S+TID VV+V+D G AK+ Y+ ++
Sbjct: 395 QQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVE 454
Query: 652 CLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDA-MLPYQLPEILRTPLQELCLHI 710
LL + ISKASA QR GRAGR +PG C++LY + M PEILR+ L + L +
Sbjct: 455 SLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQL 514
Query: 711 KSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIG 770
K L + + F + PP P + A+ELL + AL+D +LT LG + P+DP +
Sbjct: 515 KKLGIDDLVHF--DFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLA 572
Query: 771 KMLLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAF 830
KM++ + C N L+I A L+ FV P +K DEAK FA DH+ LL +
Sbjct: 573 KMVIASCDYNCSNEVLSITAMLSVPQCFVRPTEAKKAADEAKMRFAHID-GDHLTLLNVY 631
Query: 831 DGYKDAKRNRRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYSH 890
+K +N +C++NF++ +L +++R Q ++ +S ++ + Y +
Sbjct: 632 HAFK---QNHESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYIN 688
Query: 891 DLEMVCAILCAGLYPNVVQCKRKGKRAVFYTKEVGQVALHPSSVNANQNNFPLPYMVYSE 950
+ L G + V +R G +V V LHPS+V ++ P +++Y+E
Sbjct: 689 ----IRKALVTGYFMQVAHLERTGHYLTVKDNQV--VQLHPSTVLDHK---P-EWVLYNE 738
Query: 951 MVKTNNINVYDSTNI 965
V T + T+I
Sbjct: 739 FVLTTKNYIRTCTDI 753
Score = 295 (108.9 bits), Expect = 2.2e-77, Sum P(2) = 2.2e-77
Identities = 71/195 (36%), Positives = 98/195 (50%)
Query: 274 MLSFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNI 333
+L R +LP ++ K F + +Q V+ GETG GKTTQ+PQ+ +E + SL G +
Sbjct: 130 ILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEY-MRSLPGPKRGV 188
Query: 334 ICTQPXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVED 393
CTQP E LG+ VGY IR E SA+T L + T G+LLR+ + D
Sbjct: 189 ACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMND 248
Query: 394 PDLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGNAP 453
P L +++DE HER + D MSAT++A F YF N P
Sbjct: 249 PLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCP 308
Query: 454 TVHIPGLTFPVTDLF 468
+ IPG T PV ++F
Sbjct: 309 LLTIPGRTHPV-EIF 322
>RGD|1308072 [details] [associations]
symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) box polypeptide 15"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005689 "U12-type
spliceosomal complex" evidence=IEA;ISO] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 RGD:1308072 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA CTD:1665 OrthoDB:EOG4K6G3N GO:GO:0005689 EMBL:CH473963
IPI:IPI00361832 RefSeq:NP_001178526.1 UniGene:Rn.55597
Ensembl:ENSRNOT00000005126 GeneID:289693 KEGG:rno:289693
NextBio:630162 Uniprot:D3ZD97
Length = 795
Score = 550 (198.7 bits), Expect = 2.2e-77, Sum P(2) = 2.2e-77
Identities = 142/435 (32%), Positives = 231/435 (53%)
Query: 541 VESTIE-YICRHEGDGAILVFLTGWNDISKLLDQIK--VNKFLGDPNKFLVLPLHGSMPT 597
+ + I+ ++C E +G +L+FLTG +I + +IK V+ + ++PL+ ++P
Sbjct: 336 IRTVIQIHMCEEE-EGDLLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPP 394
Query: 598 INQREIFDRPPPNK------RKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLA 651
Q+ IF+ PPP K RK+V++TNIAE+S+TID VV+V+D G AK+ Y+ ++
Sbjct: 395 QQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVE 454
Query: 652 CLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDA-MLPYQLPEILRTPLQELCLHI 710
LL + ISKASA QR GRAGR +PG C++LY + M PEILR+ L + L +
Sbjct: 455 SLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQL 514
Query: 711 KSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIG 770
K L + + F + PP P + A+ELL + AL+D +LT LG + P+DP +
Sbjct: 515 KKLGIDDLVHF--DFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLA 572
Query: 771 KMLLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAF 830
KM++ + C N L+I A L+ FV P +K DEAK FA DH+ LL +
Sbjct: 573 KMVIASCDYNCSNEVLSITAMLSVPQCFVRPTEAKKAADEAKMRFAHID-GDHLTLLNVY 631
Query: 831 DGYKDAKRNRRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYSH 890
+K +N +C++NF++ +L +++R Q ++ +S ++ + Y +
Sbjct: 632 HAFK---QNHESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYIN 688
Query: 891 DLEMVCAILCAGLYPNVVQCKRKGKRAVFYTKEVGQVALHPSSVNANQNNFPLPYMVYSE 950
+ L G + V +R G +V V LHPS+V ++ P +++Y+E
Sbjct: 689 ----IRKALVTGYFMQVAHLERTGHYLTVKDNQV--VQLHPSTVLDHK---P-EWVLYNE 738
Query: 951 MVKTNNINVYDSTNI 965
V T + T+I
Sbjct: 739 FVLTTKNYIRTCTDI 753
Score = 295 (108.9 bits), Expect = 2.2e-77, Sum P(2) = 2.2e-77
Identities = 71/195 (36%), Positives = 98/195 (50%)
Query: 274 MLSFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNI 333
+L R +LP ++ K F + +Q V+ GETG GKTTQ+PQ+ +E + SL G +
Sbjct: 130 ILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEY-MRSLPGPKRGV 188
Query: 334 ICTQPXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVED 393
CTQP E LG+ VGY IR E SA+T L + T G+LLR+ + D
Sbjct: 189 ACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMND 248
Query: 394 PDLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGNAP 453
P L +++DE HER + D MSAT++A F YF N P
Sbjct: 249 PLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCP 308
Query: 454 TVHIPGLTFPVTDLF 468
+ IPG T PV ++F
Sbjct: 309 LLTIPGRTHPV-EIF 322
>UNIPROTKB|F1P306 [details] [associations]
symbol:LOC100858239 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967
SMART:SM00316 GeneTree:ENSGT00700000104241 EMBL:AADN02070153
EMBL:AADN02070154 IPI:IPI00591627 Ensembl:ENSGALT00000001801
OMA:AMANTAM Uniprot:F1P306
Length = 1168
Score = 537 (194.1 bits), Expect = 2.5e-77, Sum P(3) = 2.5e-77
Identities = 151/446 (33%), Positives = 232/446 (52%)
Query: 534 EQIDLGLVESTIEYICRHEGDGAILVFLTGWNDISKLLDQIKVN-KFLG-DPNKFLVLPL 591
+ +D L+ T+ I E G ILVFLTG +I + + K LG D + ++LP+
Sbjct: 703 DYLDASLI--TVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPV 760
Query: 592 HGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLA 651
+ ++P+ Q IFD PP RK+V+ATNIAE+S+TID + YVVD G K+ Y++ +
Sbjct: 761 YSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGID 820
Query: 652 CLLPSWISKASAHQRRGRAGRVQPGVCYKLYP-RIIHDAMLPYQLPEILRTPLQELCLHI 710
L+ + IS+A A QR GRAGR PG CY+LY R D ML +PEI RT L L +
Sbjct: 821 QLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSL 880
Query: 711 KSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIG 770
K++ + + SF P + L A+E L T+GALDD LT LGR + P++P +
Sbjct: 881 KAMGINDLLSFDFMDAPPMETLIT--AMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLC 938
Query: 771 KMLLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAF 830
KML+M C LTI + L+ +N F P + Q D+ K F DH+ LL +
Sbjct: 939 KMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQTE-GDHLTLLAVY 997
Query: 831 DGYKDAKRNRRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYSH 890
+ +K+ N+ +C+ENF+ +L+ +D+R Q L G +D+ K +
Sbjct: 998 NSWKN---NKFSNPWCYENFIQARSLRRAQDIRKQML------GIMDRHK-LDVVSCGKA 1047
Query: 891 DLEMVCAILCAGLYPNVVQCK-RKGKRAVFYTKEVGQVALHPSSVNANQNNFPLPY--MV 947
+ + AI C+G + N + ++G R + ++V V +HPSS N+ + Y +V
Sbjct: 1048 TVRVQKAI-CSGFFRNAAKKDPQEGYRTLI-DQQV--VYIHPSSALFNRQPEWVVYHELV 1103
Query: 948 YSEMVKTNNINVYDSTNISEYALLLF 973
+ + D + E+A F
Sbjct: 1104 LTTKEYMREVTTIDPRWLVEFAPAFF 1129
Score = 332 (121.9 bits), Expect = 2.5e-77, Sum P(3) = 2.5e-77
Identities = 80/209 (38%), Positives = 114/209 (54%)
Query: 266 KSSDSGKAMLSF---REKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEE 322
K+S K LS RE LP F++K + ++AV +NQ+L+V GETG GKTTQ+ Q++ E
Sbjct: 495 KASYGKKTQLSIIEQRESLPIFRLKEQLIQAVHDNQILIVIGETGSGKTTQITQYLAEAG 554
Query: 323 LSSLRGADCNIICTQPXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLLFCT 382
+S RG I CTQP E G LG+ VGY IR E S +T + + T
Sbjct: 555 YTS-RG---KIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMT 610
Query: 383 TGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINA 442
G+LLR+ + DPDL+ + +++DE HER ++ D SAT++A
Sbjct: 611 DGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDA 670
Query: 443 DLFSKYFGNAPTVHIPGLTFPVTDLFLED 471
FS+YF AP IPG T+PV L+ ++
Sbjct: 671 VKFSQYFYEAPIFTIPGRTYPVEILYTKE 699
Score = 40 (19.1 bits), Expect = 2.5e-77, Sum P(3) = 2.5e-77
Identities = 8/31 (25%), Positives = 16/31 (51%)
Query: 236 VKVANTISPPQSDSAKERLNVILKERQEKLK 266
+++ T+ PP S + + K +E+LK
Sbjct: 79 LRLIQTMRPPSKPSTSKEVVTKPKSEKERLK 109
>UNIPROTKB|E2R9R9 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN CTD:1659 EMBL:AAEX03006434 EMBL:AAEX03006433
RefSeq:XP_537627.2 ProteinModelPortal:E2R9R9
Ensembl:ENSCAFT00000023129 GeneID:480507 KEGG:cfa:480507
Uniprot:E2R9R9
Length = 1216
Score = 538 (194.4 bits), Expect = 3.3e-77, Sum P(3) = 3.3e-77
Identities = 151/446 (33%), Positives = 232/446 (52%)
Query: 534 EQIDLGLVESTIEYICRHEGDGAILVFLTGWNDISKLLDQIKVN-KFLG-DPNKFLVLPL 591
+ +D L+ T+ I E G ILVFLTG +I + + K LG D + ++LP+
Sbjct: 751 DYLDASLI--TVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPV 808
Query: 592 HGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLA 651
+ ++P+ Q IFD PP RK+V+ATNIAE+S+TID + YVVD G K+ Y++ +
Sbjct: 809 YSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGID 868
Query: 652 CLLPSWISKASAHQRRGRAGRVQPGVCYKLYP-RIIHDAMLPYQLPEILRTPLQELCLHI 710
L+ + IS+A A QR GRAGR PG CY+LY R D ML +PEI RT L L +
Sbjct: 869 QLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSL 928
Query: 711 KSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIG 770
K++ + + SF P + L A+E L T+GALDD LT LGR + P++P +
Sbjct: 929 KAMGINDLLSFDFMDAPPMETLIT--AMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLC 986
Query: 771 KMLLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAF 830
KML+M C LTI + L+ +N F P + Q D+ K F DH+ LL +
Sbjct: 987 KMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQTE-GDHLTLLAVY 1045
Query: 831 DGYKDAKRNRRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYSH 890
+ +K+ N+ +C+ENF+ +L+ +D+R Q L G +D+ K +
Sbjct: 1046 NSWKN---NKFSNPWCYENFIQARSLRRAQDIRKQML------GIMDRHK-LDVVSCGKS 1095
Query: 891 DLEMVCAILCAGLYPNVVQCK-RKGKRAVFYTKEVGQVALHPSSVNANQNNFPLPY--MV 947
+ + AI C+G + N + ++G R + ++V V +HPSS N+ + Y +V
Sbjct: 1096 TVRVQKAI-CSGFFRNAAKKDPQEGYRTLI-DQQV--VYIHPSSALFNRQPEWVVYHELV 1151
Query: 948 YSEMVKTNNINVYDSTNISEYALLLF 973
+ + D + E+A F
Sbjct: 1152 LTTKEYMREVTTIDPRWLVEFAPAFF 1177
Score = 329 (120.9 bits), Expect = 3.3e-77, Sum P(3) = 3.3e-77
Identities = 79/209 (37%), Positives = 114/209 (54%)
Query: 266 KSSDSGKAMLSF---REKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEE 322
K+S K +S RE LP +K+K + ++AV +NQ+L+V GETG GKTTQ+ Q++ E
Sbjct: 543 KASYGKKTQMSIIEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAG 602
Query: 323 LSSLRGADCNIICTQPXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLLFCT 382
+S RG I CTQP E G LG+ VGY IR E S +T + + T
Sbjct: 603 YTS-RG---KIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMT 658
Query: 383 TGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINA 442
G+LLR+ + DPDL+ + +++DE HER ++ D SAT++A
Sbjct: 659 DGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDA 718
Query: 443 DLFSKYFGNAPTVHIPGLTFPVTDLFLED 471
FS+YF AP IPG T+PV L+ ++
Sbjct: 719 VKFSQYFYEAPIFTIPGRTYPVEILYTKE 747
Score = 54 (24.1 bits), Expect = 1.1e-48, Sum P(2) = 1.1e-48
Identities = 23/108 (21%), Positives = 44/108 (40%)
Query: 191 TEKELQMSIETERRVGNLLNSSQGNVPVNDSGIESSEVARRPKLSVKVANTISPPQSDSA 250
T+ L M + ++ G LN ++ V ++ E+S R P ++ +P D +
Sbjct: 325 TKTSLSMK-DVDQETGEDLNPNRRRNLVGETNEETS--MRNPDRPTHLSLVSAPEVEDDS 381
Query: 251 KERLNVILKERQEKLKSSDSGKAMLSFREKLPAFKMKAEFLKAVAENQ 298
ER + EK + A + +E+ P F + L V + +
Sbjct: 382 LERKRLTRISDPEKWEIKQMIAANVLSKEEFPDFDEETGILPKVDDEE 429
Score = 42 (19.8 bits), Expect = 3.3e-77, Sum P(3) = 3.3e-77
Identities = 17/84 (20%), Positives = 36/84 (42%)
Query: 183 DLDERHGSTEKELQMSIETERRVGNLLNSSQGNVPVNDSGIESSEVARRPKLSVKVANTI 242
+LD G +K+L + + ++ + ++ N + S ++ +++ T+
Sbjct: 37 ELDNHLGINDKDLAEFVISLAEKNTTFDTFKASLVKNGAEFTDSLISNL----LRLIQTM 92
Query: 243 SPPQSDSAKERLNVILKERQEKLK 266
PP S + V K +EKLK
Sbjct: 93 RPPAKPSTSKDPVVKPKTGKEKLK 116
>TAIR|locus:2010549 [details] [associations]
symbol:AT1G27900 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007126 "meiosis" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0010332 "response to gamma
radiation" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0032204 "regulation of telomere
maintenance" evidence=RCA] [GO:0033044 "regulation of chromosome
organization" evidence=RCA] [GO:0042138 "meiotic DNA double-strand
break formation" evidence=RCA] [GO:0043247 "telomere maintenance in
response to DNA damage" evidence=RCA] [GO:0045132 "meiotic
chromosome segregation" evidence=RCA] [GO:0045492 "xylan
biosynthetic process" evidence=RCA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12818 EMBL:AY054692
EMBL:AY128718 IPI:IPI00545738 RefSeq:NP_564296.1 UniGene:At.25438
ProteinModelPortal:Q93Y16 SMR:Q93Y16 PaxDb:Q93Y16 PRIDE:Q93Y16
EnsemblPlants:AT1G27900.1 GeneID:839683 KEGG:ath:AT1G27900
TAIR:At1g27900 InParanoid:Q93Y16 OMA:NCRRFIV PhylomeDB:Q93Y16
ProtClustDB:CLSN2688039 ArrayExpress:Q93Y16 Genevestigator:Q93Y16
Uniprot:Q93Y16
Length = 700
Score = 546 (197.3 bits), Expect = 1.0e-76, Sum P(2) = 1.0e-76
Identities = 142/439 (32%), Positives = 231/439 (52%)
Query: 531 WSAEQIDLGLVESTIEY-ICRH--EGDGAILVFLTGWNDISKLLDQI--KVNKFL-GDPN 584
+S E+ + +ES+++ I H E +G IL+F+TG +DI KL+ ++ KV G
Sbjct: 188 YSKER-PVSYIESSLKVAIDIHVREPEGDILIFMTGQDDIEKLVSRLEEKVRSLAEGSCM 246
Query: 585 KFLVLPLHGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSY 644
++ PLHGS+P Q +F PPPN R+ +++TNIAE+S+T+D VVYV+D G K+ Y
Sbjct: 247 DAIIYPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDSGYVKQRQY 306
Query: 645 DALNKLACLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIH-DAMLPYQLPEILRTPL 703
+ + + L ISK A+QR GRAGR +PG CY+LYP ++ D L +PEI RT L
Sbjct: 307 NPSSGMFSLDVIQISKVQANQRAGRAGRTRPGKCYRLYPLAVYRDDFLDATIPEIQRTSL 366
Query: 704 QELCLHIKSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTL 763
L++KSL L + L P ++++A++ L I A+D+ +T +GR + L
Sbjct: 367 AGSVLYLKSLDLPDIDILKFDFLDAPSSESLEDALKQLYFIDAIDENGAITRIGRTMSDL 426
Query: 764 PVDPNIGKMLLMGAIFQCLNPALTIAAALAHRNPFV----LPVNMQKEVDEAKRSFAGDS 819
P++P++ + L+ CL+ ALT+ A L+ + P +++ DE G
Sbjct: 427 PLEPSLSRTLIEANETGCLSQALTVVAMLSAETTLLPARSKPSEKKRKHDEDSNLPNGSG 486
Query: 820 CSDHIALLKAFDGYKDAKRNRRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKS 879
DHI LL+ F+ + R + +C EN + + ++D+R Q ++ I
Sbjct: 487 YGDHIQLLQIFESWD---RTNYDPVWCKENGMQVRGMVFVKDVRRQLCQIMQKISKDRLE 543
Query: 880 KGPSAYNRYSHD-LEMVCAILCAGLYPNVVQ--CKRKGKRAVFYTKEVGQVALHPSSVNA 936
G S D + LC G + + + G R + + ++ QV HPSSV +
Sbjct: 544 VGADGRKSSSRDDYRKLRKALCVGNANQIAERMLRHNGYRTLSFQSQLVQV--HPSSVLS 601
Query: 937 NQNNFPLP-YMVYSEMVKT 954
N+ +P Y+VY E++ T
Sbjct: 602 ADNDGMMPNYVVYHELIST 620
Score = 261 (96.9 bits), Expect = 1.0e-76, Sum P(2) = 1.0e-76
Identities = 62/192 (32%), Positives = 98/192 (51%)
Query: 281 LPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQPXX 340
LP + + + ++ V +N V+V+ GETG GK+TQL Q IL + G I TQP
Sbjct: 4 LPILQFEEKIVETVEKNSVVVIIGETGSGKSTQLSQ-ILHRHGYTKSGV---IAITQPRR 59
Query: 341 XXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVEDPDLSCVS 400
E LGE VGY IR E + +++TR+ + T GVLLR+ + +P L S
Sbjct: 60 VAAVSVARRVAQELDVPLGEDVGYAIRFEDRTTSKTRIKYLTDGVLLRESLSNPMLDDYS 119
Query: 401 HLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXM-SATINADLFSKYFGNAPTVHIPG 459
+++DE HER +N D + SAT++ + S++F P +++PG
Sbjct: 120 VIILDEAHERSLNTDILLGLVKRLVRIRASNFKVLITSATLDGEKVSEFFSGCPVLNVPG 179
Query: 460 LTFPVTDLFLED 471
+PV L+ ++
Sbjct: 180 KLYPVEILYSKE 191
Score = 38 (18.4 bits), Expect = 3.1e-53, Sum P(2) = 3.1e-53
Identities = 6/16 (37%), Positives = 10/16 (62%)
Query: 159 LHFHAYNKGKALAVSK 174
LH H Y K +A+++
Sbjct: 41 LHRHGYTKSGVIAITQ 56
>ZFIN|ZDB-GENE-050809-39 [details] [associations]
symbol:dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide
8" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0051301 "cell division" evidence=IMP] [GO:0060215
"primitive hemopoiesis" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0070054 "mRNA splicing, via endonucleolytic
cleavage and ligation" evidence=IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-050809-39 GO:GO:0005524 GO:GO:0005634 GO:GO:0051301
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN CTD:1659
GO:GO:0060215 InterPro:IPR013957 Pfam:PF08648 EMBL:AL833789
IPI:IPI00498887 RefSeq:XP_002663993.1 UniGene:Dr.159472
ProteinModelPortal:E7F7E3 Ensembl:ENSDART00000066282 GeneID:606595
KEGG:dre:606595 NextBio:20892459 Bgee:E7F7E3 GO:GO:0070054
Uniprot:E7F7E3
Length = 1210
Score = 537 (194.1 bits), Expect = 1.9e-76, Sum P(4) = 1.9e-76
Identities = 151/446 (33%), Positives = 232/446 (52%)
Query: 534 EQIDLGLVESTIEYICRHEGDGAILVFLTGWNDISKLLDQIKVN-KFLG-DPNKFLVLPL 591
+ +D L+ T+ I E G ILVFLTG +I + + K LG D + ++LP+
Sbjct: 745 DYLDASLI--TVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPV 802
Query: 592 HGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLA 651
+ ++P+ Q IFD PP RK+V+ATNIAE+S+TID + YVVD G K+ Y++ +
Sbjct: 803 YSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGID 862
Query: 652 CLLPSWISKASAHQRRGRAGRVQPGVCYKLYP-RIIHDAMLPYQLPEILRTPLQELCLHI 710
L+ + IS+A A QR GRAGR PG CY+LY R D ML +PEI RT L L +
Sbjct: 863 QLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSL 922
Query: 711 KSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIG 770
K++ + + SF P + L A+E L T+GALDD LT LGR + P++P +
Sbjct: 923 KAMGINDLLSFDFMDAPPMETLIT--AMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLC 980
Query: 771 KMLLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAF 830
KML+M C LTI + L+ +N F P + Q D+ K F DH+ LL +
Sbjct: 981 KMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQPE-GDHLTLLAVY 1039
Query: 831 DGYKDAKRNRRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYSH 890
+ +K+ N+ +C+ENF+ +L+ +D+R Q L G +D+ K +
Sbjct: 1040 NSWKN---NKFSNPWCYENFIQARSLRRAQDIRKQML------GIMDRHK-LDVVSCGKA 1089
Query: 891 DLEMVCAILCAGLYPNVVQCK-RKGKRAVFYTKEVGQVALHPSSVNANQNNFPLPY--MV 947
+ + AI C+G + N + ++G R + ++V V +HPSS N+ + Y +V
Sbjct: 1090 TVRVQKAI-CSGFFRNAAKKDPQEGYRTLI-DQQV--VYIHPSSALFNRQPEWVVYHELV 1145
Query: 948 YSEMVKTNNINVYDSTNISEYALLLF 973
+ + D + E+A F
Sbjct: 1146 LTTKEYMREVTTIDPRWLVEFAPAFF 1171
Score = 330 (121.2 bits), Expect = 1.9e-76, Sum P(4) = 1.9e-76
Identities = 79/209 (37%), Positives = 113/209 (54%)
Query: 266 KSSDSGKAMLSF---REKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEE 322
K+S K LS RE LP +K+K + ++AV +NQ+L+V GETG GKTTQ+ Q++ E
Sbjct: 537 KASYGKKTQLSILEQRESLPIYKLKEQLIQAVHDNQILIVIGETGSGKTTQITQYLAEAG 596
Query: 323 LSSLRGADCNIICTQPXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLLFCT 382
++ RG I CTQP E G LG+ VGY IR E S +T + + T
Sbjct: 597 YTT-RG---KIGCTQPRRVAAMSVAKRVSEEYGCCLGQEVGYTIRFEDCTSPETVIKYMT 652
Query: 383 TGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINA 442
G+LLR+ + DPDL + +++DE HER ++ D SAT++A
Sbjct: 653 DGMLLRECLIDPDLGQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRTDMKLIVTSATLDA 712
Query: 443 DLFSKYFGNAPTVHIPGLTFPVTDLFLED 471
FS+YF AP IPG T+PV L+ ++
Sbjct: 713 VKFSQYFYEAPIFTIPGRTYPVEVLYTKE 741
Score = 39 (18.8 bits), Expect = 1.9e-76, Sum P(4) = 1.9e-76
Identities = 12/28 (42%), Positives = 14/28 (50%)
Query: 19 LLVVAAPITRPRVLSTSSVSFPLKTAKP 46
LL + + P STS SFP AKP
Sbjct: 72 LLRLIQTMRPPAKASTSKASFP--AAKP 97
Score = 38 (18.4 bits), Expect = 1.9e-76, Sum P(4) = 1.9e-76
Identities = 23/95 (24%), Positives = 38/95 (40%)
Query: 182 PDLDERHG-----STEKELQMSIETERRVGNLLNSSQGNVPVNDSGIESSEVARRPKLSV 236
PD DE G E++ + IE L +G+ + ++ + P S+
Sbjct: 407 PDFDEETGILPKVDDEEDEDLEIELVEEEPPFL---RGHTK-QSMDMSPVKIVKNPDGSL 462
Query: 237 KVANTISPPQSDSAKERLNVILKERQEKLKSSDSG 271
A + QS AKER V +R+ ++ S G
Sbjct: 463 SQAAMM---QSALAKERREVKQAQREAEMDSIPMG 494
>TAIR|locus:2062492 [details] [associations]
symbol:MEE29 "maternal effect embryo arrest 29"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009793 "embryo development ending in
seed dormancy" evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CP002685 GO:GO:0003676 GO:GO:0009793
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 OMA:RIDDHRD IPI:IPI00520097
RefSeq:NP_181077.3 UniGene:At.53041 ProteinModelPortal:F4IJV4
SMR:F4IJV4 PRIDE:F4IJV4 EnsemblPlants:AT2G35340.1 GeneID:818101
KEGG:ath:AT2G35340 Uniprot:F4IJV4
Length = 1044
Score = 524 (189.5 bits), Expect = 3.1e-76, Sum P(2) = 3.1e-76
Identities = 140/428 (32%), Positives = 238/428 (55%)
Query: 533 AEQIDLGLVESTIEYICRHEGDGAILVFLTGWNDISKLLDQIKVN-KFLGDPNKFLVL-P 590
A+ +D + +T+ I E G +LVFL G +I + + +K + LG + L++ P
Sbjct: 593 ADYMDAAI--TTVLTIHVKEPLGDVLVFLPGQEEIEAVEENLKHKIRGLGTKIRELIICP 650
Query: 591 LHGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKL 650
++ ++P+ Q +IF+ P RK+VLATNIAE+S+TID + YVVD G +K SY+ +
Sbjct: 651 IYANLPSELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVVDPGFSKMKSYNPRTGM 710
Query: 651 ACLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRI-IHDAMLPYQLPEILRTPLQELCLH 709
LL + ISKASA QR GRAGR PG CY+LY ++ + +PEI RT L + L
Sbjct: 711 ESLLVTPISKASATQRTGRAGRTSPGKCYRLYTAFNYYNDLEDNTVPEIQRTNLASVVLS 770
Query: 710 IKSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNI 769
+KSL + + +F + PP A+ ++ELL +GAL+ + LT GR + P+DP +
Sbjct: 771 LKSLGIHNLLNF--DFMDPPPSEALIKSLELLFALGALNQLGELTKAGRRMAEFPLDPML 828
Query: 770 GKMLLMGAIFQCLNPALTIAAALA-HRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLK 828
KM+++ ++C + ++IAA L+ + F P + Q D A ++F + DHIA LK
Sbjct: 829 SKMIVVSDKYKCSDEIISIAAMLSIGPSIFYRPKDKQVHADNAMKNFHVGNVGDHIAFLK 888
Query: 829 AFDGYKDAKRNRRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRY 888
++ +K+ + + +C+EN++ +++ D+R Q LL + +D S
Sbjct: 889 IYNSWKETNYSTQ---WCYENYIQVRSMKRARDIRDQLEGLLERVE-IDVSSN------- 937
Query: 889 SHDLEMVCAILCAGLYPNVVQCKRKGK-RAVFYTKEVGQVALHPSSVNANQNNFPLPYMV 947
+++L+ + + AG +P+ + ++ G R V K V +HP+S +Q P ++V
Sbjct: 938 ANELDSIRKSIVAGFFPHTAKLQKNGSYRTV---KHPQTVHIHPAS-GLSQV-LPR-WVV 991
Query: 948 YSEMVKTN 955
Y ++V T+
Sbjct: 992 YHQLVLTS 999
Score = 327 (120.2 bits), Expect = 3.1e-76, Sum P(2) = 3.1e-76
Identities = 108/368 (29%), Positives = 164/368 (44%)
Query: 116 FDQNEWWGKLEQMKRGEEQEMIIKRKFSRADQQTLADMAHQLGLHFHAYNKGKALAVSKV 175
F E+ K +Q K E ++ I + D++ + Y K +
Sbjct: 225 FSWQEYMKKRKQKKVLELKDDIEDEPYLFGDEKLTEREIREFRYKREIYELIKKSTQEED 284
Query: 176 PLPMYR-PDLDERHGST--EKELQMSIETERRVGNL--LNSSQGNVPVNDSGIESSEV-- 228
+ YR PD ++ GS EK +S++ R +G+ +N D IE++ +
Sbjct: 285 NVGEYRMPDAYDQQGSVDQEKRFAVSVQRYRDMGSAEKMNPFAEQEAWEDHQIENAALKF 344
Query: 229 -ARRPKLSVKVANTISPPQSDSAKERLNV--ILKERQEKLKSSDS-GKA---MLSF-REK 280
A+ ++S + Q D K + ++ S DS GK+ ML R+
Sbjct: 345 GAKNKEVSDNY-EFVFEDQIDFIKASVLAGDNYEDEMHAKPSQDSAGKSAFHMLQEDRKA 403
Query: 281 LPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQPXX 340
LP + + + L AV ++QVL++ GETG GKTTQ+PQ++ E + L G + CTQP
Sbjct: 404 LPIYTYRDQLLNAVKDHQVLIIVGETGSGKTTQIPQYLHEAGYTKL-G---KVGCTQPRR 459
Query: 341 XXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVEDPDLSCVS 400
E G LG VGY IR E S +T L + T G+LLR+L+ +PDL S
Sbjct: 460 VAAMSVAARVAQEMGGKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLRELLGEPDLGSYS 519
Query: 401 HLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGNAPTVHIPGL 460
++VDE HER + D SAT++A+ FS +F AP PG
Sbjct: 520 VIIVDEAHERTLRTDILFGLVKDIARARPDLKLLISSATMDAEKFSDFFDQAPIFRFPGR 579
Query: 461 TFPVTDLF 468
+PV F
Sbjct: 580 RYPVDICF 587
Score = 42 (19.8 bits), Expect = 1.9e-24, Sum P(2) = 1.9e-24
Identities = 13/31 (41%), Positives = 17/31 (54%)
Query: 501 KDHLTALFEDVDID-SNYKNYRASTRASLEA 530
+D L L E V+ID S+ N S R S+ A
Sbjct: 920 RDQLEGLLERVEIDVSSNANELDSIRKSIVA 950
>UNIPROTKB|G4NHA6 [details] [associations]
symbol:MGG_03893 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp43" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:CM001236 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12820 RefSeq:XP_003719983.1
EnsemblFungi:MGG_03893T0 GeneID:2677480 KEGG:mgr:MGG_03893
Uniprot:G4NHA6
Length = 779
Score = 518 (187.4 bits), Expect = 6.7e-76, Sum P(2) = 6.7e-76
Identities = 149/457 (32%), Positives = 237/457 (51%)
Query: 528 LEAWSAEQIDLGLVESTIEYICR-H--EGDGAILVFLTGWNDISKLLDQIK--VNKFLGD 582
+E + + + +E+++ + + H E +G IL+FLTG +I + +++ V++ + D
Sbjct: 288 VEIFYTAEAERDYIEASVRTVLQIHATEAEGDILLFLTGEEEIEDVCRKVRLEVDELIRD 347
Query: 583 PN--KFLVLPLHGSMPTINQREIFDR-PPPNK------RKIVLATNIAESSITIDDVVYV 633
+ V PL+G++P Q++IF+ PPP K RK ++ATNIAE+S+TID +VYV
Sbjct: 348 ADCGPMEVYPLYGTLPPQQQQKIFNAAPPPLKKGGRPGRKCIVATNIAETSLTIDGIVYV 407
Query: 634 VDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPY 693
VD G +K+ Y+A ++ LL + IS+ASA QR GRAGR +PG C++LY L
Sbjct: 408 VDPGFSKQKIYNARIRVESLLVTPISRASAQQRAGRAGRTRPGKCFRLYTEAAFKKELIE 467
Query: 694 QL-PEILRTPLQELCLHIKSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMEN 752
Q PEILR+ L L +K L + + F + PP P + A+E L + L+D +
Sbjct: 468 QTYPEILRSNLSNTILELKKLGVDDLVHF--DFMDPPAPETMMRALEELNYLSCLNDDGD 525
Query: 753 LTPLGRHLCTLPVDPNIGKMLLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAK 812
LT LG P+DP + ML+ F C N L++ + L+ F+ P N +K DE K
Sbjct: 526 LTDLGHMASEYPLDPALAVMLVSSPEFYCSNEMLSVTSLLSVPQVFMRPANNRKRADEMK 585
Query: 813 RSFAGDSCSDHIALLKAFDGYK-DAKRNRRERDFCWENFLSPITLQMMEDMRSQFLDLLS 871
F DH+ LL A+ +K + + + +C E+FLS L +++R+Q ++
Sbjct: 586 EHFKHME-GDHLTLLNAYHAFKSEMAKGTDMKKWCHEHFLSYRHLSSADNVRAQLKGIME 644
Query: 872 --DIGFVDKSKGPSAYNRYSHDLEMVCAILCAGLYPNVVQCKRKGKRAVFYT-KEVGQVA 928
D+ V P Y ++ C L AG + V + GK V++T K+ V
Sbjct: 645 RQDLELVST---PFTDKNYYTNIRR-C--LVAGFFMQVALRETSGK--VYHTIKDNQNVM 696
Query: 929 LHPSSVNANQNNFPLPYMVYSEMVKTNNINVYDSTNI 965
LHPSSV +++Y E V T+ + T I
Sbjct: 697 LHPSSVLTTDYE----WVLYHEFVLTSKQYIRTVTGI 729
Score = 318 (117.0 bits), Expect = 6.7e-76, Sum P(2) = 6.7e-76
Identities = 70/195 (35%), Positives = 101/195 (51%)
Query: 274 MLSFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNI 333
+L R LP + + EFL + Q++V GETG GKTTQ+PQ++L +EL L +
Sbjct: 100 ILKTRRNLPVHQHRQEFLDVYHKTQIMVFVGETGSGKTTQIPQYVLYDELPHLNKK--MV 157
Query: 334 ICTQPXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVED 393
CTQP E LG+ VGY IR E+K + T L + T G LLR+ + D
Sbjct: 158 ACTQPRRVAAMSVAQRVADELDVELGQEVGYSIRFENKTTPSTILKYMTDGQLLRETIHD 217
Query: 394 PDLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGNAP 453
P+++ S +++DE HER + D MSAT++A F +YF AP
Sbjct: 218 PNMTRYSCIIIDEAHERTLATDILMALLKQLSLRRSDLKIIIMSATLDAAKFQRYFFEAP 277
Query: 454 TVHIPGLTFPVTDLF 468
+ +PG T PV ++F
Sbjct: 278 ILAVPGRTHPV-EIF 291
Score = 37 (18.1 bits), Expect = 1.9e-23, Sum P(2) = 1.9e-23
Identities = 7/24 (29%), Positives = 16/24 (66%)
Query: 993 LHFSASKTVLELIRKLRGELDKLL 1016
L + + + ++ RK+R E+D+L+
Sbjct: 322 LFLTGEEEIEDVCRKVRLEVDELI 345
>UNIPROTKB|G4NFJ0 [details] [associations]
symbol:MGG_08807 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp22" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:CM001236 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 KO:K12818 RefSeq:XP_003719164.1
ProteinModelPortal:G4NFJ0 EnsemblFungi:MGG_08807T0 GeneID:2678973
KEGG:mgr:MGG_08807 Uniprot:G4NFJ0
Length = 1207
Score = 511 (184.9 bits), Expect = 8.4e-76, Sum P(3) = 8.4e-76
Identities = 141/406 (34%), Positives = 213/406 (52%)
Query: 533 AEQIDLGLVESTIEYICRHEGDGAILVFLTGWNDISKLLDQI-KVNKFLGDPN--KFLVL 589
++ +D L +T+ I E G IL+FLTG +I + + + K LG P+ + ++L
Sbjct: 731 SDYLDAAL--TTVMQIHIDEPPGDILLFLTGQEEIDTSCEILFERMKALG-PSVPELIIL 787
Query: 590 PLHGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNK 649
P++ ++P Q IFD PP RK+V+ATNIAE+SITID + YVVD G K+ +YD
Sbjct: 788 PVYSALPNEMQSRIFDPAPPGSRKVVIATNIAETSITIDHIYYVVDPGFVKQNAYDPKLG 847
Query: 650 LACLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDA-MLPYQLPEILRTPLQELCL 708
+ L+ + IS+A A+QR GRAGR PG C++LY + MLP +PEI R L L
Sbjct: 848 MDSLVVTPISQAQANQRAGRAGRTGPGKCFRLYTEAAYQTEMLPTSIPEIQRQNLSNTIL 907
Query: 709 HIKSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPN 768
+K++ + + F + PP + A+E L + ALDD LT LGR + P++P+
Sbjct: 908 LLKAMGINDLLHF--DFMDPPPINTMLTALEELYALSALDDEGLLTRLGRKMADFPMEPS 965
Query: 769 IGKMLLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLK 828
+ K+L+ +C + L+I A L N F P Q + D K F D DH+ LL
Sbjct: 966 LSKVLIASVEMRCSDEMLSIVAMLNLPNVFYRPKEKQTQADAKKAKFH-DPNGDHLTLLN 1024
Query: 829 AFDGYKDAKRNRRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRY 888
++ +K ++R + +C ENF+ L D+R+Q ++ + S G S NR
Sbjct: 1025 VYNAWK---QSRYSKPWCAENFIQFRALTRARDVRNQIERIMQRFKYQVMSCG-SDTNR- 1079
Query: 889 SHDLEMVCAILCAGLYPNVVQCKRKGKRAVFYTKEVGQ-VALHPSS 933
V LC+G + N RK ++ + T G V LHPSS
Sbjct: 1080 ------VRQALCSGFFRNAA---RKDQQEGYRTLIEGTPVYLHPSS 1116
Score = 344 (126.2 bits), Expect = 8.4e-76, Sum P(3) = 8.4e-76
Identities = 85/239 (35%), Positives = 118/239 (49%)
Query: 233 KLSVKVANTISPPQSDSAKERLNVILKERQEKLKSSDSGKAMLSFREKLPAFKMKAEFLK 292
K + + T+ S++ E I + Q K ++ + RE LP F + + +K
Sbjct: 496 KFAADMRRTMQNRPSEAVPEWRQAIAPKNQSFGKRTNM--TIKQQRESLPVFAFREQLIK 553
Query: 293 AVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQPXXXXXXXXXXXXXX 352
AV ENQ+++V GETG GKTTQL Q++ E ++ G I CTQP
Sbjct: 554 AVKENQIMIVVGETGSGKTTQLTQYLAEAGFAN-EGV---IGCTQPRRVAAMSVAKRVSE 609
Query: 353 ERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGM 412
E G LG+ VGY IR E S TR+ + T G+L R++V DPDL S +++DE HER +
Sbjct: 610 EVGCELGQEVGYTIRFEDCTSPATRIKYMTDGMLQREIVIDPDLKRYSVIMLDEAHERTI 669
Query: 413 NEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGNAPTVHIPGLTFPVTDLFLED 471
D SAT++AD FS YF P IPG TFPV L+ +D
Sbjct: 670 ATDVLFALLKKATRRRPDLKIIVTSATLDADKFSAYFNECPIFTIPGRTFPVEILYSKD 728
Score = 43 (20.2 bits), Expect = 8.4e-76, Sum P(3) = 8.4e-76
Identities = 8/15 (53%), Positives = 11/15 (73%)
Query: 146 DQQTLADMAHQLGLH 160
DQQT D+A ++G H
Sbjct: 308 DQQTGEDLAPEVGFH 322
Score = 43 (20.2 bits), Expect = 1.6e-44, Sum P(2) = 1.6e-44
Identities = 18/62 (29%), Positives = 27/62 (43%)
Query: 353 ERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVED--PDLSCVSHLLVDEIHER 410
+ GE+L VG+ S L + G+L ED PDLS + + L H++
Sbjct: 310 QTGEDLAPEVGFHSGANSMALGSRHNL--SNGLL-----EDKAPDLSAIKNTLPGRKHKK 362
Query: 411 GM 412
M
Sbjct: 363 RM 364
>WB|WBGene00018967 [details] [associations]
symbol:F56D2.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0016246 "RNA interference" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0042127
"regulation of cell proliferation" evidence=IMP] [GO:0040020
"regulation of meiosis" evidence=IMP] [GO:0040022 "feminization of
hermaphroditic germ-line" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006898
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0016246
GO:GO:0008380 GO:GO:0006397 GO:GO:0040011 GO:GO:0003676
GO:GO:0042127 GO:GO:0040035 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0040022 HOGENOM:HOG000175261 EMBL:FO080358
KO:K12820 PIR:T16482 RefSeq:NP_741147.1 ProteinModelPortal:Q20875
SMR:Q20875 STRING:Q20875 PaxDb:Q20875 PRIDE:Q20875
EnsemblMetazoa:F56D2.6a.1 EnsemblMetazoa:F56D2.6a.2 GeneID:175771
KEGG:cel:CELE_F56D2.6 UCSC:F56D2.6a CTD:175771 WormBase:F56D2.6a
GeneTree:ENSGT00650000093246 InParanoid:Q20875 OMA:TVLQIHA
NextBio:889592 ArrayExpress:Q20875 Uniprot:Q20875
Length = 739
Score = 524 (189.5 bits), Expect = 2.6e-75, Sum P(2) = 2.6e-75
Identities = 142/440 (32%), Positives = 227/440 (51%)
Query: 541 VESTIEYICRHEGDGAILVFLTGWNDISKLLDQI--KVNKFLGDPNKFLVLPLHGSMPTI 598
+ + I+ E +G IL+FLTG +I + +I ++ D +PL+ ++P
Sbjct: 280 IRTVIQIHMVEEVEGDILLFLTGQEEIEEACKRIDREIQALGADAGALSCIPLYSTLPPA 339
Query: 599 NQREIFDRPPPNK------RKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLAC 652
Q+ IF+ PPN+ RK V++TNIAE+S+TID VV+V+D G +K+ Y+ ++
Sbjct: 340 AQQRIFEPAPPNRPNGAISRKCVISTNIAETSLTIDGVVFVIDPGFSKQKVYNPRIRVES 399
Query: 653 LLPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQL-PEILRTPLQELCLHIK 711
LL ISKASA QR GRAGR +PG C++LY + + + Q PEILR+ L + L +K
Sbjct: 400 LLVCPISKASAMQRAGRAGRTKPGKCFRLYTETAYGSEMQDQTYPEILRSNLGSVVLQLK 459
Query: 712 SLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGK 771
+LGT + PP P + A+ELL + A++D LT LG + P+DP + K
Sbjct: 460 --KLGTEDLVHFDFMDPPAPETLMRALELLNYLQAINDDGELTELGSLMAEFPLDPQLAK 517
Query: 772 MLLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFD 831
ML+ C N L+I A L+ +V P M+ E DEAK FA DH+ LL +
Sbjct: 518 MLITSTELNCSNEILSITAMLSVPQCWVRPNEMRTEADEAKARFAHID-GDHLTLLNVYH 576
Query: 832 GYKDAKRNRRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYSHD 891
+K +N+ + +C++NF++ T++ + +R+Q ++ S + + Y +
Sbjct: 577 SFK---QNQEDPQWCYDNFINYRTMKTADTVRTQLSRVMDKYNLRRVSTDFKSRDYYLN- 632
Query: 892 LEMVCAILCAGLYPNVVQCKRKGKRAVFYTKEVGQVALHPSSVNANQNNFPLPYMVYSEM 951
+ L AG + V +R G K+ V LHPS+V ++ + L Y+E
Sbjct: 633 ---IRKALVAGFFMQVAHLERSGHYVT--VKDNQLVNLHPSTVLDHKPEWAL----YNEF 683
Query: 952 VKTNNINVYDSTNISEYALL 971
V T + T++ LL
Sbjct: 684 VLTTKNFIRTVTDVRPEWLL 703
Score = 298 (110.0 bits), Expect = 2.6e-75, Sum P(2) = 2.6e-75
Identities = 69/202 (34%), Positives = 101/202 (50%)
Query: 278 REKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQ----FILEEELSSLRGADCNI 333
R +LP ++ K +F++ + NQ + + GETG GKTTQ+PQ F+ +++ G +
Sbjct: 73 RSQLPVWEYKEKFMELLRNNQCITLVGETGSGKTTQIPQWAVEFMKQQQQGQPPGQARLV 132
Query: 334 ICTQPXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVED 393
CTQP E LG+ VGY IR E S +T L +CT G+LLR+ +
Sbjct: 133 ACTQPRRVAAMSVATRVAEEMDVVLGQEVGYSIRFEDCISERTVLKYCTDGMLLREAMNS 192
Query: 394 PDLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGNAP 453
P L L++DE HER + D MSAT++A F +YF + P
Sbjct: 193 PLLDKYKVLILDEAHERTLATDILMGLIKEIVRNRADIKVVIMSATLDAGKFQRYFEDCP 252
Query: 454 TVHIPGLTFPVTDLFLEDVLEK 475
+ +PG TFPV ++F EK
Sbjct: 253 LLSVPGRTFPV-EIFFTPNAEK 273
>UNIPROTKB|Q20875 [details] [associations]
symbol:F56D2.6 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase F56D2.6" species:6239 "Caenorhabditis
elegans" [GO:0030686 "90S preribosome" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] [GO:0006364 "rRNA processing"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006898
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0016246
GO:GO:0008380 GO:GO:0006397 GO:GO:0040011 GO:GO:0003676
GO:GO:0042127 GO:GO:0040035 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0040022 HOGENOM:HOG000175261 EMBL:FO080358
KO:K12820 PIR:T16482 RefSeq:NP_741147.1 ProteinModelPortal:Q20875
SMR:Q20875 STRING:Q20875 PaxDb:Q20875 PRIDE:Q20875
EnsemblMetazoa:F56D2.6a.1 EnsemblMetazoa:F56D2.6a.2 GeneID:175771
KEGG:cel:CELE_F56D2.6 UCSC:F56D2.6a CTD:175771 WormBase:F56D2.6a
GeneTree:ENSGT00650000093246 InParanoid:Q20875 OMA:TVLQIHA
NextBio:889592 ArrayExpress:Q20875 Uniprot:Q20875
Length = 739
Score = 524 (189.5 bits), Expect = 2.6e-75, Sum P(2) = 2.6e-75
Identities = 142/440 (32%), Positives = 227/440 (51%)
Query: 541 VESTIEYICRHEGDGAILVFLTGWNDISKLLDQI--KVNKFLGDPNKFLVLPLHGSMPTI 598
+ + I+ E +G IL+FLTG +I + +I ++ D +PL+ ++P
Sbjct: 280 IRTVIQIHMVEEVEGDILLFLTGQEEIEEACKRIDREIQALGADAGALSCIPLYSTLPPA 339
Query: 599 NQREIFDRPPPNK------RKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLAC 652
Q+ IF+ PPN+ RK V++TNIAE+S+TID VV+V+D G +K+ Y+ ++
Sbjct: 340 AQQRIFEPAPPNRPNGAISRKCVISTNIAETSLTIDGVVFVIDPGFSKQKVYNPRIRVES 399
Query: 653 LLPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQL-PEILRTPLQELCLHIK 711
LL ISKASA QR GRAGR +PG C++LY + + + Q PEILR+ L + L +K
Sbjct: 400 LLVCPISKASAMQRAGRAGRTKPGKCFRLYTETAYGSEMQDQTYPEILRSNLGSVVLQLK 459
Query: 712 SLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGK 771
+LGT + PP P + A+ELL + A++D LT LG + P+DP + K
Sbjct: 460 --KLGTEDLVHFDFMDPPAPETLMRALELLNYLQAINDDGELTELGSLMAEFPLDPQLAK 517
Query: 772 MLLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFD 831
ML+ C N L+I A L+ +V P M+ E DEAK FA DH+ LL +
Sbjct: 518 MLITSTELNCSNEILSITAMLSVPQCWVRPNEMRTEADEAKARFAHID-GDHLTLLNVYH 576
Query: 832 GYKDAKRNRRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYSHD 891
+K +N+ + +C++NF++ T++ + +R+Q ++ S + + Y +
Sbjct: 577 SFK---QNQEDPQWCYDNFINYRTMKTADTVRTQLSRVMDKYNLRRVSTDFKSRDYYLN- 632
Query: 892 LEMVCAILCAGLYPNVVQCKRKGKRAVFYTKEVGQVALHPSSVNANQNNFPLPYMVYSEM 951
+ L AG + V +R G K+ V LHPS+V ++ + L Y+E
Sbjct: 633 ---IRKALVAGFFMQVAHLERSGHYVT--VKDNQLVNLHPSTVLDHKPEWAL----YNEF 683
Query: 952 VKTNNINVYDSTNISEYALL 971
V T + T++ LL
Sbjct: 684 VLTTKNFIRTVTDVRPEWLL 703
Score = 298 (110.0 bits), Expect = 2.6e-75, Sum P(2) = 2.6e-75
Identities = 69/202 (34%), Positives = 101/202 (50%)
Query: 278 REKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQ----FILEEELSSLRGADCNI 333
R +LP ++ K +F++ + NQ + + GETG GKTTQ+PQ F+ +++ G +
Sbjct: 73 RSQLPVWEYKEKFMELLRNNQCITLVGETGSGKTTQIPQWAVEFMKQQQQGQPPGQARLV 132
Query: 334 ICTQPXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVED 393
CTQP E LG+ VGY IR E S +T L +CT G+LLR+ +
Sbjct: 133 ACTQPRRVAAMSVATRVAEEMDVVLGQEVGYSIRFEDCISERTVLKYCTDGMLLREAMNS 192
Query: 394 PDLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGNAP 453
P L L++DE HER + D MSAT++A F +YF + P
Sbjct: 193 PLLDKYKVLILDEAHERTLATDILMGLIKEIVRNRADIKVVIMSATLDAGKFQRYFEDCP 252
Query: 454 TVHIPGLTFPVTDLFLEDVLEK 475
+ +PG TFPV ++F EK
Sbjct: 253 LLSVPGRTFPV-EIFFTPNAEK 273
>TAIR|locus:2088847 [details] [associations]
symbol:AT3G26560 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA;ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0000226 "microtubule cytoskeleton
organization" evidence=RCA] [GO:0000911 "cytokinesis by cell plate
formation" evidence=RCA] [GO:0006486 "protein glycosylation"
evidence=RCA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005829 GO:GO:0005739 GO:GO:0009506 GO:GO:0005524
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0008380
GO:GO:0006397 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 EMBL:X98130
EMBL:X97970 EMBL:AB028611 IPI:IPI00530246 RefSeq:NP_189288.1
UniGene:At.46918 ProteinModelPortal:Q38953 SMR:Q38953 STRING:Q38953
PaxDb:Q38953 PRIDE:Q38953 EnsemblPlants:AT3G26560.1 GeneID:822264
KEGG:ath:AT3G26560 GeneFarm:1800 TAIR:At3g26560 InParanoid:Q38953
KO:K12818 OMA:NAWCYEN PhylomeDB:Q38953 ProtClustDB:CLSN2684863
Genevestigator:Q38953 GermOnline:AT3G26560 Uniprot:Q38953
Length = 1168
Score = 528 (190.9 bits), Expect = 3.0e-75, Sum P(2) = 3.0e-75
Identities = 128/340 (37%), Positives = 193/340 (56%)
Query: 534 EQIDLGLVESTIEYICRHEGDGAILVFLTGWNDISKLLDQIKVN-KFLG-DPNKFLVLPL 591
+ +D L+ T+ I E +G ILVFLTG +I + K LG + + ++LP+
Sbjct: 705 DYLDAALI--TVLQIHLTEPEGDILVFLTGQEEIDSACQSLYERMKGLGKNVPELIILPV 762
Query: 592 HGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLA 651
+ ++P+ Q IFD PPP KRK+V+ATNIAE+S+TID + YVVD G AK+ Y+ L
Sbjct: 763 YSALPSEMQSRIFDPPPPGKRKVVVATNIAEASLTIDGIYYVVDPGFAKQNVYNPKQGLE 822
Query: 652 CLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIH-DAMLPYQLPEILRTPLQELCLHI 710
L+ + IS+ASA QR GRAGR PG CY+LY + + M P +PEI R L L +
Sbjct: 823 SLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMPPTSIPEIQRINLGMTTLTM 882
Query: 711 KSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIG 770
K++ + + SF + PP P A+ +A+E L ++GALD+ LT LGR + P++P +
Sbjct: 883 KAMGINDLLSF--DFMDPPQPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLEPPLS 940
Query: 771 KMLLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAF 830
KMLL C + LT+ A + N F P Q + D+ + F DH+ LL +
Sbjct: 941 KMLLASVDLGCSDEILTMIAMIQTGNIFYRPREKQAQADQKRAKFFQPE-GDHLTLLAVY 999
Query: 831 DGYKDAKRNRRERDFCWENFLSPITLQMMEDMRSQFLDLL 870
+ +K AK +C+ENF+ +L+ +D+R Q L ++
Sbjct: 1000 EAWK-AKNF--SGPWCFENFIQSRSLRRAQDVRKQLLSIM 1036
Score = 316 (116.3 bits), Expect = 3.0e-75, Sum P(2) = 3.0e-75
Identities = 76/191 (39%), Positives = 103/191 (53%)
Query: 278 REKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQ 337
RE LP +K+K E ++AV +NQVLVV GETG GKTTQ+ Q++ E ++ +G I CTQ
Sbjct: 512 RESLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTT-KG---KIGCTQ 567
Query: 338 PXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVEDPDLS 397
P E G LGE VGY IR E T + + T G+LLR+++ D +LS
Sbjct: 568 PRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLS 627
Query: 398 CVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGNAPTVHI 457
S +++DE HER ++ D SAT++A+ FS YF N I
Sbjct: 628 QYSVIMLDEAHERTIHTDVLFGLLKKLMKRRLDLRLIVTSATLDAEKFSGYFFNCNIFTI 687
Query: 458 PGLTFPVTDLF 468
PG TFPV L+
Sbjct: 688 PGRTFPVEILY 698
>CGD|CAL0005059 [details] [associations]
symbol:orf19.2818 species:5476 "Candida albicans" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IEA] [GO:0000386
"second spliceosomal transesterification activity" evidence=IEA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IEA]
[GO:0000350 "generation of catalytic spliceosome for second
transesterification step" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 CGD:CAL0005059
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACQ01000080 EMBL:AACQ01000079 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12815
RefSeq:XP_715749.1 RefSeq:XP_715799.1 STRING:Q5A227 GeneID:3642531
GeneID:3642595 KEGG:cal:CaO19.10336 KEGG:cal:CaO19.2818
Uniprot:Q5A227
Length = 1070
Score = 483 (175.1 bits), Expect = 3.1e-75, Sum P(2) = 3.1e-75
Identities = 142/440 (32%), Positives = 218/440 (49%)
Query: 554 DGAILVFLTGWNDISKLLDQIKVN-KFLGDPNKFLVLPLHGSMPTINQREIFDRPPPNKR 612
DG ILVF+TG DI D IK L DP + P++ +MP Q++IF++ +R
Sbjct: 582 DGDILVFMTGQEDIEITCDLIKEKLNLLEDPPPLDIFPIYSTMPQDLQKKIFNKTNLQRR 641
Query: 613 KIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGR 672
K+V+ATNIAE+S+T+D + YV+DCG K Y+ + L IS A+A QR GRAGR
Sbjct: 642 KVVVATNIAETSLTVDGIKYVIDCGLVKVKVYNPKLGMDTLQVVPISLANADQRSGRAGR 701
Query: 673 VQPGVCYKLYPRIIH--DAMLPYQLPEILRTPLQELCLHIKSLQLGTVGSFLSKALQPPD 730
G+ Y+LY D+M +PEI R+ L + L +KSL++ + SF L PP
Sbjct: 702 TGAGIAYRLYTEKATEPDSMYVQPIPEIQRSNLSNIMLLLKSLKVNDINSF--PFLDPPP 759
Query: 731 PLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGKMLLMGAI--FQCLNPALTI 788
+ ++ L IGALD++ LT LG + P++P + K++L+ F C +TI
Sbjct: 760 KDLLNCSLYDLWAIGALDNLGELTKLGHSMTQFPIEPTLAKLILLSTQPEFHCSEEVVTI 819
Query: 789 AAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYK----DAKRNRRE-R 843
A L+ N F P E D A+ F S SDH+ LL F+ + K N +
Sbjct: 820 VAMLSVPNIFNRPKERANEADMAREKFI-ISESDHLTLLNVFNQWNINLNKFKGNYTKIN 878
Query: 844 DFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYSHDLEMVCAILCAGL 903
++C +NFL +L +D++ Q + ++ K+K ++ D+ C LCA
Sbjct: 879 NWCNKNFLQLKSLYRAKDIKHQLMLIMK------KNKLAILKSKTDDDIRK-C--LCASF 929
Query: 904 YPNVVQCKR---KGK-RAVFYTKEVGQVALHPSSVNANQNNFPLPYMVYSEMVKT----- 954
Y + + G+ V ++ LHP+S + +N Y++Y E+V T
Sbjct: 930 YQQSAKLTKMNLNGQPEFVNLRHSYMKMFLHPTS-SLLDSNLSTNYVIYHELVLTKKEYM 988
Query: 955 NNINVYDSTNISEYALLLFG 974
N + D + EY FG
Sbjct: 989 NCVTTVDPIWLLEYGYKFFG 1008
Score = 362 (132.5 bits), Expect = 3.1e-75, Sum P(2) = 3.1e-75
Identities = 103/327 (31%), Positives = 163/327 (49%)
Query: 164 YNKGKAL-AVSKVPLP--MYRPDLDERHGSTEKELQMSIETERRVGNLLN------SSQG 214
Y+ K+L ++++P+ ++ P E + +LQ+S + R +G +N S
Sbjct: 229 YDHQKSLNELNRIPITSHVFIPPFLE-NSKQYLQLQISGSSIRGIGPTVNPVKDPTSELA 287
Query: 215 NVPVNDSGIESSEVARRPK-LSVKVANTISPPQSDSAKERLNVILKERQEKLKSSDSGKA 273
++ S + + ++R + L K A + S + N + +QE+ K++D +
Sbjct: 288 SMAKQGSFVVQNRRSKRERALQAKEAAGVENSNIGSIIDTANTTEEIKQEE-KNADVNET 346
Query: 274 ----MLSFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSL--R 327
+ R+ LPAF ++ + L + +NQV +V GETG GKTTQL QF+ E+ + +
Sbjct: 347 KHQDIQQQRKSLPAFAVRNDLLTTIRDNQVTIVIGETGSGKTTQLTQFLYEDGFGANIDK 406
Query: 328 GADCNII-CTQPXXXXXXXXXXXXXXERGENLGETVGYQIRLESKR-SAQTRLLFCTTGV 385
+ II CTQP E LGE VGY IR E K + +T + + T G+
Sbjct: 407 NGEKRIIACTQPRRVAAMSVAKRVSEEMNCKLGEEVGYSIRFEDKTDNKKTVIKYMTEGI 466
Query: 386 LLRQLVEDPDLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINADLF 445
LLR+++ DP L+ S +++DE HER +N D SAT+NA+ F
Sbjct: 467 LLREILADPMLANYSCIIMDEAHERSLNTDILLGLFKNLLAKRKDLKLIVTSATMNANRF 526
Query: 446 SKYFGNAPTVHIPGLTFPVTDLFLEDV 472
+K+FG AP HIPG TFPV F DV
Sbjct: 527 TKFFGVAPQFHIPGRTFPVEVFFNRDV 553
Score = 37 (18.1 bits), Expect = 1.1e-27, Sum P(2) = 1.1e-27
Identities = 11/47 (23%), Positives = 23/47 (48%)
Query: 942 PLP-YMVYSEMVKTNNINVYDSTNISEYALLLFGGNLIPSKTGEGIE 987
PL + +YS M + +++ TN+ +++ S T +GI+
Sbjct: 614 PLDIFPIYSTMPQDLQKKIFNKTNLQRRKVVVATNIAETSLTVDGIK 660
>UNIPROTKB|E2RQN1 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 EMBL:AAEX03013926
Ensembl:ENSCAFT00000014378 NextBio:20859776 Uniprot:E2RQN1
Length = 698
Score = 533 (192.7 bits), Expect = 3.5e-75, Sum P(2) = 3.5e-75
Identities = 143/442 (32%), Positives = 231/442 (52%)
Query: 541 VESTIEYICR-H--EGDGAILVFLTGWNDI----SKLLDQIKVNKFLGDPNKFLVLPLHG 593
++ST+E + + H EGDG IL FLTG ++ S L++Q + G VLP++
Sbjct: 250 IKSTVETVMKIHQTEGDGDILAFLTGQEEVETVVSMLIEQARALGRTGMKRHLRVLPMYA 309
Query: 594 SMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACL 653
+P+ Q ++F+R + RK+++ATN+AE+SITI +VYV+DCG K +Y+ + CL
Sbjct: 310 GLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTTIECL 369
Query: 654 LPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQLPEILRTPLQELCLHIKSL 713
+ + +S+ASA+QR GRAGR + G CY+LY D + +PE+ R+ L + L +K+L
Sbjct: 370 VVAPVSQASANQRAGRAGRSRSGKCYRLYTEEAFDKLPQCTVPEMQRSNLAPVILQLKAL 429
Query: 714 QLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLT-PLGRHLCTLPVDPNIGKM 772
+ V F + PP ++ A+ELL +G LD LT PLG + P++P KM
Sbjct: 430 GIDNVLRF--HFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRVAEFPLNPMFAKM 487
Query: 773 LLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDG 832
LL F C L+IAA + +N FV+P N + + R FA + DH+ +L ++
Sbjct: 488 LLESGNFGCSQEILSIAAMMQIQNIFVVPGNQKSQAIRVHRKFAVEE-GDHLTMLNVYEA 546
Query: 833 YKDAKRNRRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYSHDL 892
+ K N+ + +C E+FL+ L +R Q LL KS D
Sbjct: 547 F--IKHNKNSQ-WCQEHFLNYKGLIRAATVREQLKKLLVKFQVPKKSS--------EGDP 595
Query: 893 EMVCAILCAGLYPNVVQCKRKG--KRAVFYTKEVGQVALHPSSVNANQNNFPLPYMVYSE 950
+ V + +G + N + G R + ++ QV L + V Q+ + ++Y+E
Sbjct: 596 DPVLRCIVSGFFANAARFHSTGAYSRTLAHSGREAQVHLF-TVVPGTQSRYWGFRVIYNE 654
Query: 951 MVKTNNINVYDSTNISEYALLL 972
+++T+ + D T I E A LL
Sbjct: 655 VIQTSKYYMRDVTAI-ESAWLL 675
Score = 260 (96.6 bits), Expect = 3.5e-75, Sum P(2) = 3.5e-75
Identities = 76/245 (31%), Positives = 117/245 (47%)
Query: 235 SVKVANTISPPQSDSAKERLNVILKERQEKLKSSDSGKAMLSFREKLPAFKMKAEFLKAV 294
S+ V T P S S +ER ++ + + + ++ R+KLP FK++ L V
Sbjct: 1 SISVTGTEGPGVSIS-EERQSLAENSATTVVYNPYAALSIEQQRQKLPVFKLRNHILYLV 59
Query: 295 AENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQPXXXXXXXXXXXXXXER 354
Q +V+ GETGCGK+TQ+PQ++ E ++ G + TQP ER
Sbjct: 60 ENYQTVVIVGETGCGKSTQIPQYLAEAGWTA-EGRVVGV--TQPRRVAAVTVAGRVAEER 116
Query: 355 GENLGETVGYQIRLESKRSA-QTRLLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMN 413
G LG VGY IR + TR+ F T G+L+R+++ DP L+ S +++DE HER +
Sbjct: 117 GAVLGHEVGYCIRFDDCTDPLATRIKFLTDGMLVREMMVDPLLTKYSAIMLDEAHERTLY 176
Query: 414 EDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYFG----NAPT------VHIPGLTFP 463
D SAT++A+ F +F + PT + + G TFP
Sbjct: 177 TDIAIGLLKKIQRKRGDLRLLVASATLDAEKFRDFFNQNETSDPTRDTCVILTVEGRTFP 236
Query: 464 VTDLF 468
V D+F
Sbjct: 237 V-DIF 240
>DICTYBASE|DDB_G0285937 [details] [associations]
symbol:dhx16 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR002483 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01480
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0285937 GO:GO:0005524
GO:GO:0005634 GenomeReviews:CM000153_GR GO:GO:0008380 GO:GO:0006397
GO:GO:0003676 EMBL:AAFI02000082 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 Gene3D:1.20.1390.10 KO:K12813 GO:GO:0003724
RefSeq:XP_638017.1 EnsemblProtists:DDB0233398 GeneID:8625368
KEGG:ddi:DDB_G0285937 OMA:YLLEREV Uniprot:Q54MH3
Length = 1106
Score = 519 (187.8 bits), Expect = 1.1e-74, Sum P(3) = 1.1e-74
Identities = 137/421 (32%), Positives = 233/421 (55%)
Query: 518 KNYRASTRASLEAWSAEQIDLGLVESTIEYICRHEGDGAILVFLTGWNDISKLLDQIKVN 577
+ Y +T + +A A+ +D +V T+ I E G ILVFLTG ++ + + ++
Sbjct: 642 RKYEVTTHYT-QAPEADYLDAAVV--TVLQIHITEPLGDILVFLTGQEEVDQAAEMLQTR 698
Query: 578 -KFLGDPNKFLVLP-LHGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVD 635
+ LG K L++ ++ ++PT Q +IF+ PPN RK+VLATNIAE+S+TID ++YV+D
Sbjct: 699 TRGLGTKIKELIITRIYSTLPTDLQAKIFEPTPPNARKVVLATNIAETSLTIDGIIYVID 758
Query: 636 CGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQ- 694
G K+ ++ + L+ + +S+ASA+QR+GRAGRV PG C++L+ D L
Sbjct: 759 PGFCKQKMFNPRTGMESLVITPVSRASANQRKGRAGRVAPGKCFRLFTAWAFDNELEENT 818
Query: 695 LPEILRTPLQELCLHIKSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLT 754
+PEI RT L + L +KS+ + + +F + PP + A+E L +GAL+D LT
Sbjct: 819 IPEIQRTNLGNVVLLLKSMGINDLMNF--DFMDPPPAQTLIAALEQLYALGALNDRGQLT 876
Query: 755 PLGRHLCTLPVDPNIGKMLLMGAIFQCLNPALTIAAALAHRNP-FVLPVNMQKEVDEAKR 813
LGR + PVDP + KM++ ++C LTI A L+ N F P + D A++
Sbjct: 877 KLGRKMAEFPVDPQLSKMIIASEKYKCSEEILTICAMLSVGNTIFYRPKDKAFAADAARK 936
Query: 814 SFAGDSCSDHIALLKAFDGYKDAKRNRRERDFCWENFLSPITLQMMEDMRSQFLDLLSDI 873
F DH+ L+ F+ ++++ + +C+ENF+ +++ +D+R Q L+LL
Sbjct: 937 LFFHPQ-GDHLTLMNVFNQWRESGYAVQ---WCFENFIQHRSMKRAQDVRDQ-LELL--- 988
Query: 874 GFVDKSKGPSAYNRYSHDLEMVCAILCAGLYPNVVQCKRKGKRAVFYTKEVGQ-VALHPS 932
+++ + P N D + + + +G + N + ++ G +F T + Q V +HPS
Sbjct: 989 --LERVEIPLVSN--VDDTDSIRKCIASGFFYNSAKLEKSG---LFRTTKHNQSVQIHPS 1041
Query: 933 S 933
S
Sbjct: 1042 S 1042
Score = 317 (116.6 bits), Expect = 1.1e-74, Sum P(3) = 1.1e-74
Identities = 77/206 (37%), Positives = 103/206 (50%)
Query: 265 LKSSDSGKAMLSF-----REKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFIL 319
LK D G A R+ LP + + + + AV E QVL++ GETG GKTTQ+PQ++
Sbjct: 446 LKPGDDGSAQAKMTIQEVRKSLPVYPYREQLIDAVREYQVLIIVGETGSGKTTQIPQYLH 505
Query: 320 EEELSSLRGADCNIICTQPXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLL 379
E S G I CTQP E G LG VGY IR E S +T L
Sbjct: 506 EAGFSKT-G---KIGCTQPRRVAAMSVAARVAEEVGCKLGNEVGYSIRFEDCTSQKTVLQ 561
Query: 380 FCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSAT 439
+ T G+L+R+ + PDL+ S L++DE HER ++ D SAT
Sbjct: 562 YMTDGMLVREFLTAPDLASYSVLIIDEAHERTLHTDILFGLLKDITRFRPDLKLLISSAT 621
Query: 440 INADLFSKYFGNAPTVHIPGLTFPVT 465
++A+ FS YF APT +IPG + VT
Sbjct: 622 MDAERFSDYFDGAPTFNIPGRKYEVT 647
Score = 48 (22.0 bits), Expect = 1.1e-74, Sum P(3) = 1.1e-74
Identities = 19/75 (25%), Positives = 33/75 (44%)
Query: 191 TEKELQMSIETERRVGNLLNSSQGNVPVNDSGIESSEVARRPKLSVKVANTISPPQSDSA 250
TE++ ++ T+ LLN SQ + S SS S ++++ S D
Sbjct: 49 TEQDFPINSNTKSFAQELLNKSQQKIQNITSSSSSSS-------STSLSSSSS--SKDKE 99
Query: 251 KERLNVILKERQEKL 265
KE++ + K + KL
Sbjct: 100 KEKIEFLKKNKSYKL 114
Score = 43 (20.2 bits), Expect = 3.5e-74, Sum P(3) = 3.5e-74
Identities = 12/43 (27%), Positives = 19/43 (44%)
Query: 238 VANTISPPQSDSAKERLNVILKERQEKLKSSDSGKAMLSFREK 280
+ N+ SDS ER ++++EK D S R+K
Sbjct: 122 IVNSSGSSDSDSDSERKRKKKEKKKEKKDKKDKKDKKSSTRKK 164
>UNIPROTKB|E1C4U5 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0071013 "catalytic step
2 spliceosome" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:AADN02019394
IPI:IPI00591771 Ensembl:ENSGALT00000005796 Uniprot:E1C4U5
Length = 705
Score = 521 (188.5 bits), Expect = 2.2e-74, Sum P(2) = 2.2e-74
Identities = 144/442 (32%), Positives = 232/442 (52%)
Query: 541 VESTIEYICR-H--EGDGAILVFLTGWNDI----SKLLDQIKVNKFLGDPNKFLVLPLHG 593
++ST+E + H E DG IL FLTG ++ S L++Q + G VLP++
Sbjct: 258 IKSTVETAMKIHQMENDGDILAFLTGQEEVETVVSMLIEQARALSRTGMRKHLRVLPMYA 317
Query: 594 SMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACL 653
+P+ +Q ++F+R + RK+++ATN+AE+SITI + YV+DCG K +Y+ + CL
Sbjct: 318 GLPSPDQMKVFERVSRSVRKVIVATNVAETSITIHGIAYVIDCGFVKLRAYNPKTAIECL 377
Query: 654 LPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHD-AMLPYQ-LPEILRTPLQELCLHIK 711
+ +SKASA+QR GRAGR + G CY+LY D LP +PE+ R+ L + L +K
Sbjct: 378 VVVPVSKASANQRAGRAGRNRSGKCYRLYTATEEDFEKLPQSTVPEMQRSNLAPVILQLK 437
Query: 712 SLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLT-PLGRHLCTLPVDPNIG 770
+L + V F L PP ++ A+ELL +G LD LT PLG + P++P
Sbjct: 438 ALGIDNVLRF--PFLSPPPAQSMVQALELLYALGGLDMHCRLTEPLGMRIAEFPLNPMFA 495
Query: 771 KMLLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAF 830
KMLL F C LTIAA + +N F++P N + + R FA + DH+ +L +
Sbjct: 496 KMLLESGNFGCSQEILTIAAMMQIQNIFLIPPNQKSQAARQHRKFAVEE-GDHLTMLNVY 554
Query: 831 DGYKDAKRNRRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYSH 890
+ + ++ + +C E+FL+ L +R Q LL + F K P +
Sbjct: 555 EAFV---KHSKSSQWCQEHFLNYKGLVRASVVREQLKKLL--VCF----KVPKKSSEGDP 605
Query: 891 DLEMVCAILCAGLYPNVVQCKRKGKRAVFYTKEVGQVALHPSSVNANQNNFPLPYMVYSE 950
D + C + +G + N + G A ++ ++ +HP+SV + P ++VY+E
Sbjct: 606 DPVLRCIV--SGFFANAAKFHSTG--AYRTIRDDHELHIHPTSVLYAEK--PPRWVVYNE 659
Query: 951 MVKTNNINVYDSTNISEYALLL 972
+++T + D T I E A L+
Sbjct: 660 VIQTAKYYMRDVTAI-ESAWLV 680
Score = 265 (98.3 bits), Expect = 2.2e-74, Sum P(2) = 2.2e-74
Identities = 78/231 (33%), Positives = 111/231 (48%)
Query: 257 ILKERQEKLKSSD-----SGKAMLSF---REKLPAFKMKAEFLKAVAENQVLVVSGETGC 308
+ +ERQ +SS + A LS R+KLP FK++ L V Q LV+ GETGC
Sbjct: 22 VSEERQSPAESSGVTVVYNPYASLSIEQQRQKLPVFKLRNHILYLVESYQTLVIVGETGC 81
Query: 309 GKTTQLPQFILEEELSSLRGADCNIICTQPXXXXXXXXXXXXXXERGENLGETVGYQIRL 368
GK+TQ+PQ++ E ++ G + TQP ERG LG VGY IR
Sbjct: 82 GKSTQIPQYLAEAGWTA-EGRVVGV--TQPRRVAAVSVAGRVADERGAVLGHEVGYCIRF 138
Query: 369 ESKRSAQ-TRLLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXX 427
+ Q TR+ F T G+L+R+++ DP L+ S L++DE HER + D
Sbjct: 139 DDCTDPQATRIKFLTDGMLVREMMADPLLTRYSVLMLDEAHERTLYTDIAIGLLKKIQKK 198
Query: 428 XXXXXXXXMSATINADLFSKYFGNAPT----------VHIPGLTFPVTDLF 468
SAT++A+ F +F T + + G TFPV D+F
Sbjct: 199 RGDLRLIVASATLDAEKFRDFFNQNDTGDPSKDTSVILTVEGRTFPV-DIF 248
>ASPGD|ASPL0000052850 [details] [associations]
symbol:AN1363 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:BN001308 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K13117
EMBL:AACD01000018 OrthoDB:EOG4BGD47 RefSeq:XP_658967.1
EnsemblFungi:CADANIAT00001248 GeneID:2877144 KEGG:ani:AN1363.2
OMA:VAEEMRC Uniprot:Q5BDL7
Length = 670
Score = 536 (193.7 bits), Expect = 2.4e-74, Sum P(2) = 2.4e-74
Identities = 146/442 (33%), Positives = 230/442 (52%)
Query: 544 TIEYICRHEGDGAILVFLTGWNDISKLLDQIKVNKFLGDPNK--FLVLPLHGSMPTINQR 601
T+ I EG+G IL+FLTG +I + I P L LPL+ + T Q
Sbjct: 236 TVFDIHLQEGEGDILIFLTGREEIETAIQLISERATTLHPKSQSLLPLPLYAGLTTDQQM 295
Query: 602 EIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKA 661
+F+ P N RK+V++TNIAE+S+TI+ +VYVVDCG AK +YD + L ISKA
Sbjct: 296 YVFEPAPENTRKVVVSTNIAEASVTINGIVYVVDCGFAKLRAYDPSTGIETLTAVPISKA 355
Query: 662 SAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQLPEILRTPLQELCLHIKSLQLGTVGSF 721
+A QR GRAGR +PG C++LY + ++ + +PEI R+ L + + +K+L + + F
Sbjct: 356 AAVQRAGRAGRTKPGKCFRLYTQHAYEQLPDATIPEIQRSNLAPVIMQLKALGIDNIVRF 415
Query: 722 LSKALQPPDPLAVQNAIELLKTIGALDDMENLT-PLGRHLCTLPVDPNIGKMLLMGAIFQ 780
PP L ++ A ELL ++GA+DD LT PLG + L VDP + K+LL F
Sbjct: 416 -DFLTSPPADLVIR-AFELLYSLGAIDDYAKLTKPLGMRMAELAVDPMMAKVLLSAQSFG 473
Query: 781 CLNPALTIAAALAHRNP-FVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAKRN 839
CL+ LTIAA ++ + +V +K + ++R FA + DH+ L + + +
Sbjct: 474 CLSEILTIAAMVSLQGAVWVQHDGDKKSSESSRRKFAVEE-GDHLTYLNVYQAF--VTKG 530
Query: 840 RRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGF-VDKSKGPSAYNR--YSHDLEMVC 896
++E +C +N L+ +L +R+Q L G VD++ PS YN+ S E +
Sbjct: 531 KKESKWCRDNLLNYRSLLRAVSVRAQLKRYLERFGIQVDETF-PSHYNKSDLSKPAEKIQ 589
Query: 897 AILCAGLYPNVVQCKRKGKRAVFYTKEVGQVA-LHPSSVNANQNNFPLPYMVYSEMVKTN 955
L G + + + + G F T G HPSS+ N+ ++++ E+++T
Sbjct: 590 RCLTTGYFAHAARMQPDG---TFKTVSGGMTLHAHPSSLMFNRK---ADWVIFHEIMQTG 643
Query: 956 NIN-VYDSTNISEYALLLFGGN 976
+ D T I + LL + N
Sbjct: 644 EKTFIRDITKIEKSYLLEYAPN 665
Score = 249 (92.7 bits), Expect = 2.4e-74, Sum P(2) = 2.4e-74
Identities = 74/209 (35%), Positives = 94/209 (44%)
Query: 281 LPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQPXX 340
LP + K L V V +V G+TG GKTTQLPQ+ L++ G I TQP
Sbjct: 22 LPIARHKQSILYLVETYPVTIVVGQTGSGKTTQLPQY-LDQAGWCTEGKA--IAVTQPRR 78
Query: 341 XXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVEDPDLSCVS 400
E LGE VGY IR E + SA TR+ F T G+LLR+ + DP LS S
Sbjct: 79 VAATTVAARVAEEMRCKLGEDVGYSIRFEDRTSAMTRIKFLTDGMLLREALVDPLLSRYS 138
Query: 401 HLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYF----------- 449
++VDE HER ++ D SAT+ A+ F +YF
Sbjct: 139 VIMVDEAHERSLSTDILLGILKKILKRRPELRIIVSSATLQAEDFLRYFAGDESQQGPNG 198
Query: 450 ---GNA-PTVHIPGLTFPVTDLFLEDVLE 474
GN + I G +PV LFLE E
Sbjct: 199 EVGGNTGKIISIEGRMYPVDTLFLESAAE 227
>UNIPROTKB|Q5THR1 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
EMBL:AL023803 UniGene:Hs.444520 HGNC:HGNC:15861 IPI:IPI00642913
SMR:Q5THR1 Ensembl:ENST00000373325 Uniprot:Q5THR1
Length = 679
Score = 512 (185.3 bits), Expect = 2.6e-74, Sum P(3) = 2.6e-74
Identities = 128/392 (32%), Positives = 205/392 (52%)
Query: 541 VESTIEYICR-H--EGDGAILVFLTGWNDI----SKLLDQIKVNKFLGDPNKFLVLPLHG 593
++ST+E + + H EGDG +L FLTG ++ S L++Q + G VLP++
Sbjct: 258 IKSTVETVVKIHQTEGDGDVLAFLTGQEEVETVVSMLIEQARALARTGMKRHLRVLPMYA 317
Query: 594 SMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACL 653
+P+ Q ++F+R + RK+++ATN+AE+SITI +VYV+DCG K +Y+ + CL
Sbjct: 318 GLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIECL 377
Query: 654 LPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQLPEILRTPLQELCLHIKSL 713
+ +S+ASA+QR GR GR + G CY+LY D + +PE+ R+ L + L +K+L
Sbjct: 378 VVVPVSQASANQRAGRGGRSRSGKCYRLYTEEAFDKLPQSTVPEMQRSNLAPVILQLKAL 437
Query: 714 QLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLT-PLGRHLCTLPVDPNIGKM 772
+ V F + PP ++ A+ELL +G LD LT PLG + P++P KM
Sbjct: 438 GIDNVLRF--HFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEFPLNPMFAKM 495
Query: 773 LLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDG 832
LL F C L+IAA + +N FV+P N + R FA + DH+ +L ++
Sbjct: 496 LLESGNFGCSQEILSIAAMMQIQNIFVVPPNQKSHAIRVHRKFAVEE-GDHLTMLNIYEA 554
Query: 833 YKDAKRNRRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYSHDL 892
+ K N+ + +C E+FL+ L +R Q LL K + P + DL
Sbjct: 555 F--IKHNKDSK-WCQEHFLNYKGLVRAATVREQLKKLLV------KFQVPRKSSEGDPDL 605
Query: 893 EMVCAILCAGLYPNVVQCKRKGKRAVFYTKEV 924
+ C + +G + N + G V Y + +
Sbjct: 606 VLRCIV--SGFFANAARFHSTGAYRVIYNEVI 635
Score = 256 (95.2 bits), Expect = 2.6e-74, Sum P(3) = 2.6e-74
Identities = 67/202 (33%), Positives = 98/202 (48%)
Query: 278 REKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQ 337
R+KLP FK++ L + Q +V+ GETGCGK+TQ+PQ++ E ++ G + TQ
Sbjct: 51 RQKLPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWTA-EGRVVGV--TQ 107
Query: 338 PXXXXXXXXXXXXXXERGENLGETVGYQIRLES-KRSAQTRLLFCTTGVLLRQLVEDPDL 396
P ERG LG VGY IR + TR+ F T G+L+R+++ DP L
Sbjct: 108 PRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLATRIKFLTDGMLVREMMVDPLL 167
Query: 397 SCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGNAPT-- 454
+ S +++DE HER + D SAT++AD F +F T
Sbjct: 168 TKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDADKFRDFFNQNETSD 227
Query: 455 --------VHIPGLTFPVTDLF 468
+ + G TFPV D+F
Sbjct: 228 PARDTCVILTVEGRTFPV-DIF 248
Score = 39 (18.8 bits), Expect = 2.6e-74, Sum P(3) = 2.6e-74
Identities = 10/27 (37%), Positives = 18/27 (66%)
Query: 946 MVYSEMVKTNNINVYDSTNISEYALLL 972
++Y+E+++T+ + D T I E A LL
Sbjct: 629 VIYNEVIQTSKYYMRDVTAI-ESAWLL 654
>ASPGD|ASPL0000006947 [details] [associations]
symbol:AN5827 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:BN001301 EMBL:AACD01000100 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K12813
OMA:RIDDHRD OrthoDB:EOG4SBJ63 RefSeq:XP_663431.1
ProteinModelPortal:Q5B0V3 EnsemblFungi:CADANIAT00007219
GeneID:2871194 KEGG:ani:AN5827.2 Uniprot:Q5B0V3
Length = 1128
Score = 510 (184.6 bits), Expect = 6.5e-74, Sum P(3) = 6.5e-74
Identities = 137/420 (32%), Positives = 218/420 (51%)
Query: 543 STIEYICRHEGDGAILVFLTGWNDISKLLDQIKVN-KFLGDP-NKFLVLPLHGSMPTINQ 600
+T+ I +G G ILVFLTG +I ++ + LG+ + ++ P++ ++P+ Q
Sbjct: 679 TTVFQIHVSQGPGDILVFLTGQEEIEAAEQSLQETARKLGNKIPEMIICPIYANLPSDLQ 738
Query: 601 REIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISK 660
+IF+ PP RK+VLATNIAE+S+TID +VYV+D G KE ++ + L+ + S+
Sbjct: 739 AKIFEPTPPKARKVVLATNIAETSLTIDGIVYVIDPGFVKENVFNPRTGMESLVVTPCSR 798
Query: 661 ASAHQRRGRAGRVQPGVCYKLYPR-IIHDAMLPYQLPEILRTPLQELCLHIKSLQLGTVG 719
ASA+QR GRAGRV PG C++LY + ++ + PEI RT L + L +KSL + +
Sbjct: 799 ASANQRAGRAGRVGPGKCFRLYTKWAYYNELEESTTPEIQRTNLSSVILMLKSLGIDQLL 858
Query: 720 SFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGKMLLMGAIF 779
F + PP + A+E L +GAL+D LT +GR + P DP + K +L
Sbjct: 859 EF--DFMDPPPAETIIRALEQLYALGALNDRGELTKIGRQMAEFPTDPMLAKAILAADKH 916
Query: 780 QCLNPALTIAAALAHRNP-FVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAKR 838
C+ L+I + L + F P + + D A+ F DH+ LL ++ + D+
Sbjct: 917 GCVEEVLSIVSMLGEASALFFRPKDKKIHADSARNRFTVKDGGDHLTLLNIWNQWVDS-- 974
Query: 839 NRRERDFCW--ENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYSHDLEMVC 896
+ + W ENFL +L D+R Q L + S G S+++ +
Sbjct: 975 ---DFSYVWAKENFLQQRSLTRARDVRDQLAKLCDRVEVTVSSCG-------SNNIVPIQ 1024
Query: 897 AILCAGLYPNVVQCKRKGKRAVFYTKEVGQ-VALHPSSVNANQNNFPLPYMVYSEMVKTN 955
+ AG +PN + +R G + T + GQ V LHPSS N P +++Y E+V T+
Sbjct: 1025 KAITAGFFPNAARLQRGGDS--YRTIKTGQTVYLHPSSTLFEVN--PR-WVIYFELVLTS 1079
Score = 327 (120.2 bits), Expect = 6.5e-74, Sum P(3) = 6.5e-74
Identities = 75/204 (36%), Positives = 107/204 (52%)
Query: 262 QEKLKSSDS-GKAMLSFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILE 320
QEKL ++ + + R+KLP ++ + + ++AV ++QVL++ GETG GKTTQLPQ++ E
Sbjct: 461 QEKLDQAEQKAQTIEDTRKKLPIYQFRDQIIQAVHDHQVLIIVGETGSGKTTQLPQYLHE 520
Query: 321 EELSSLRGADCNIICTQPXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLLF 380
+ G + CTQP E G LG VGY IR E S +T L +
Sbjct: 521 AGYTK-NGM--KVGCTQPRRVAAMSVAARVAEEMGVKLGNEVGYSIRFEDNTSDKTVLKY 577
Query: 381 CTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATI 440
T G+LLR+L+ +PDL S L++DE HER + D SAT+
Sbjct: 578 MTDGMLLRELLTEPDLGQYSALMIDEAHERTVPTDIACGLLKDIAKARPDLKLLISSATM 637
Query: 441 NADLFSKYFGNAPTVHIPGLTFPV 464
+A F YF NAP +IPG + V
Sbjct: 638 DAQKFQSYFDNAPIFNIPGRMYNV 661
Score = 41 (19.5 bits), Expect = 6.5e-74, Sum P(3) = 6.5e-74
Identities = 25/99 (25%), Positives = 40/99 (40%)
Query: 183 DLDERHGSTEKELQMSIETERRVGNLLNSSQG--NVPVNDSGIESSEVARRPKLSVKVAN 240
DLD E+E + +E + L S + + + + SE ARR L+
Sbjct: 227 DLDPEERK-ERERKRDLEERDALAKRLASKDDKRSKKIVEDRTKDSEAARRRALADDAK- 284
Query: 241 TISPPQSDSAKERLNVILKERQEKLKSSDSGKAMLSFRE 279
D+A L L+ RQE LK ++ + L R+
Sbjct: 285 -----ARDAAMPDLR--LRSRQEYLKKRETERLALLRRQ 316
>POMBASE|SPBC19C2.01 [details] [associations]
symbol:cdc28 "ATP-dependent RNA helicase Cdc28"
species:4896 "Schizosaccharomyces pombe" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=TAS] [GO:0005524 "ATP binding"
evidence=IC] [GO:0005681 "spliceosomal complex" evidence=IC]
[GO:0005682 "U5 snRNP" evidence=ISO] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IMP] [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPBC19C2.01
GO:GO:0005524 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0005682 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0046540 GO:GO:0004004 EMBL:U48733 PIR:T46568 PIR:T50372
RefSeq:NP_595686.2 ProteinModelPortal:Q10752 STRING:Q10752
EnsemblFungi:SPBC19C2.01.1 GeneID:2540707 KEGG:spo:SPBC19C2.01
HOGENOM:HOG000175261 KO:K12813 OMA:RIDDHRD OrthoDB:EOG4SBJ63
NextBio:20801829 GO:GO:0045292 Uniprot:Q10752
Length = 1055
Score = 490 (177.5 bits), Expect = 1.6e-73, Sum P(3) = 1.6e-73
Identities = 148/464 (31%), Positives = 232/464 (50%)
Query: 520 YRASTRASLEAWSAEQIDLGLVESTIEYICR-H--EGDGAILVFLTGWNDISKLLDQIK- 575
Y R ++ + Q + +++ I I + H + G ILVFLTG ++I + + ++
Sbjct: 590 YVPGRRYPVDIYYTPQPEANYIQAAITTILQIHTTQPAGDILVFLTGQDEIELMSENMQE 649
Query: 576 VNKFLGDPNKFLVL-PLHGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVV 634
+ + LG ++L P++ ++P+ Q +IFD PP RK+VLATNIAE+SITID V +V+
Sbjct: 650 LCRILGKRIPEIILCPIYANLPSELQAKIFDPTPPGARKVVLATNIAETSITIDGVNFVI 709
Query: 635 DCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQ 694
D G K+ Y+ + L+ S+ASA QR GRAGRV PG C++LY R ++ L
Sbjct: 710 DSGFVKQNMYNPRTGMESLVSVPCSRASADQRAGRAGRVGPGKCFRLYTRRTYNNELDMV 769
Query: 695 L-PEILRTPLQELCLHIKSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENL 753
PEI RT L + L +KSL + + F + P P + ++ELL +GAL++ L
Sbjct: 770 TSPEIQRTNLTNIVLLLKSLGINNLLDF--DFMDAPPPETLMRSLELLYALGALNNRGEL 827
Query: 754 TPLGRHLCTLPVDPNIGKMLLMGAIFQCLNPALTIAAALAHRNP-FVLPVNMQKEVDEAK 812
T LGR + P DP + K L+ + + C+ L+I + L + F P + E D+A+
Sbjct: 828 TKLGRQMAEFPTDPMLSKSLIASSKYGCVEEVLSIVSMLGEASSLFYRPKDKIMEADKAR 887
Query: 813 RSFAGDSCSDHIALLKAFDGYKDAKRNRRERDFCW--ENFLSPITLQMMEDMRSQFLDLL 870
+F DH+ LL ++ + D + + W ENFL +L D+R Q +L
Sbjct: 888 ANFTQPG-GDHLTLLHIWNEWVDT-----DFSYNWARENFLQYKSLCRARDVRDQLANLC 941
Query: 871 S--DIGFVDKSKGPSAYNRYSHDLEMVCAILCAGLYPNVVQCKRKGKRAVFYTKEVGQ-V 927
+I V S S L+ + + AG + N + R G + T + Q V
Sbjct: 942 ERVEIELVTNS---------SESLDPIKKAITAGYFSNAARLDRSGDS--YRTVKSNQTV 990
Query: 928 ALHPSSVNANQNNFPLPYMVYSEMVKTNNINVYDSTNISEYALL 971
+HPSS A + P ++Y E+V T T I LL
Sbjct: 991 YIHPSSSVAEKK--P-KVIIYFELVLTTKEYCRQITEIQPEWLL 1031
Score = 338 (124.0 bits), Expect = 1.6e-73, Sum P(3) = 1.6e-73
Identities = 75/206 (36%), Positives = 111/206 (53%)
Query: 263 EKLKSSDSGKAMLSFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEE 322
+K+ K++ S R+ LP ++ K + LKA+ E QVL++ ETG GKTTQLPQF+ E
Sbjct: 400 DKMTDVKVEKSLESSRKSLPVYQYKDDLLKAINEYQVLLIVAETGSGKTTQLPQFL--HE 457
Query: 323 LSSLRGADCNIICTQPXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLLFCT 382
+G + I CTQP E LG+ VGY IR E+ S +T + + T
Sbjct: 458 AGYTKG-NKKICCTQPRRVAAMSVAARVAKEMDVRLGQEVGYSIRFENATSEKTVIKYLT 516
Query: 383 TGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINA 442
G+LLR+ + +PDL+ S +++DE HER ++ D SATI+A
Sbjct: 517 DGMLLREFLTEPDLASYSVIIIDEAHERTLHTDILFGLVKDIARFRPDLKVLISSATIDA 576
Query: 443 DLFSKYFGNAPTVHIPGLTFPVTDLF 468
+ FS YF AP ++PG +PV D++
Sbjct: 577 EKFSAYFDEAPVFYVPGRRYPV-DIY 601
Score = 46 (21.3 bits), Expect = 1.6e-73, Sum P(3) = 1.6e-73
Identities = 10/22 (45%), Positives = 15/22 (68%)
Query: 103 AERLRQQAAEME---VFDQNEW 121
AE+ R +A ++ +FDQNEW
Sbjct: 344 AEQQRWEAQQINKALLFDQNEW 365
Score = 40 (19.1 bits), Expect = 6.9e-73, Sum P(3) = 6.9e-73
Identities = 12/41 (29%), Positives = 20/41 (48%)
Query: 108 QQAAEMEVFDQNEWWGKLEQMKRGEEQEMIIKRKFSRADQQ 148
++ A ++ D E W KL R + ++ +K RA QQ
Sbjct: 214 EELALRKLADDPESWRKLASELRKKSRQQYLK---PRAQQQ 251
Score = 38 (18.4 bits), Expect = 1.6e-41, Sum P(3) = 1.6e-41
Identities = 19/78 (24%), Positives = 34/78 (43%)
Query: 473 LEK--TRYKMNSKLDSFQGNXXXXXXQDSKKDHLTALFEDVDIDSNYKNYRASTRASLEA 530
LEK T Y+M + QG + K++ L ++D + +N A +
Sbjct: 295 LEKQATEYQMPEDYFTEQGKLD----RKRKEEVLYQRYKDSN--EGEQNEVTMGAAEQQR 348
Query: 531 WSAEQIDLGLVESTIEYI 548
W A+QI+ L+ E++
Sbjct: 349 WEAQQINKALLFDQNEWL 366
>UNIPROTKB|G4NI12 [details] [associations]
symbol:MGG_17793 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0043581 "mycelium development"
evidence=IEP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 GO:GO:0043581
EMBL:CM001236 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 RefSeq:XP_003720239.1 EnsemblFungi:MGG_17793T0
GeneID:12987242 KEGG:mgr:MGG_17793 Uniprot:G4NI12
Length = 1430
Score = 558 (201.5 bits), Expect = 2.3e-73, Sum P(2) = 2.3e-73
Identities = 174/568 (30%), Positives = 277/568 (48%)
Query: 453 PTVHIPGLTFPVTDLFLEDVLEKTRYKMNSKLDSFQGNXXXXXXQDSKKDHLTALFEDVD 512
P + IPG TFPV+ ++L+ +L R K +LD + +D K +A + ++
Sbjct: 782 PILSIPGRTFPVSSIYLDRLLPMIRDKYGEQLDLW--------LED--KPFKSAAIQYLE 831
Query: 513 IDSNYKNYRASTRASLEAWSAEQIDLGLVESTIEYICRHEGDGAILVFLTGWNDISKLLD 572
+++ + S E +A + + LV +TI +I G ILVFL G +I + D
Sbjct: 832 TETS-SEWDISDETLAERHAA-YVPIDLVAATIAHIASSASPGDILVFLPGIKEIRSVND 889
Query: 573 QIKVNK-FLG---------DPNKFLVLPLHGSMPTINQREIFDRPPPNKRKIVLATNIAE 622
++ + LG D +KF + LH ++ Q +IF + P R+I+LA+NIAE
Sbjct: 890 VLRDRQGSLGIDFKDINFNDTSKFRIHFLHSAVSAAEQNKIFQKVPLGCRRIILASNIAE 949
Query: 623 SSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPGVCYKLY 682
+S+TI DVV+VVD GK ++ YD ++ + W +K+ A QR+GRAGR Q G Y LY
Sbjct: 950 TSVTIPDVVHVVDVGKTRDRKYDRSTRITGMYTGWQTKSKAMQRQGRAGRTQEGHYYGLY 1009
Query: 683 PRIIHDAMLPYQLPEILRTPLQELCLHIKSLQL-GTVGSFLSKALQPPDPLAVQNAIELL 741
+M LPE+L+ L CL +K +V FL+ A+ PP P VQ+A+ L
Sbjct: 1010 SEQRRQSMKDDALPEMLKLDLTNTCLSVKGFGFRDSVADFLAAAISPPPPSVVQDAVNSL 1069
Query: 742 KTIGALDDMENLTPLGRHLCTLPVDPNIGKMLLMGAIFQCLNPALTIAAALAHRNPFVLP 801
K + AL + E +T LG L +P+ P +GKM+L+G F+C+ P + + A + F +P
Sbjct: 1070 KAMDALAENEGITSLGHLLLRIPLHPLLGKMILLGVFFRCVGPMIVLCALHGGGSLFEVP 1129
Query: 802 VNMQKEVDEAKRSF-AGDSCSDHIALLKAFDGYKDAKR-NRRER-DFCWENFLSPITLQM 858
A + F DS DH++ +KAF+ + ++ + RE DF L+ +
Sbjct: 1130 PGSPSAAKRAHQQFRVADS--DHLSQMKAFNHLRQLEQISHREAVDFARSEHLNFAKYEE 1187
Query: 859 MEDMRSQFLDLLSDIGFV---DK------SKGPSAYNRYSHDLEMVCAILCAGLYPNV-V 908
+ +Q +L + G V D+ S G N S + +++ A+L GLYPNV V
Sbjct: 1188 AKLTAAQIEQVLINHGLVPPRDELEHRFSSPGGVELNVNSGNEQLLKALLVKGLYPNVAV 1247
Query: 909 QCKRKGKRAVFYTKE--VGQVAL-HPSSVNANQNNFPLPYMVYSEMVKTNNINVYDSTNI 965
+ R R G V L H S V N+ E+ N++ VY
Sbjct: 1248 KVARSPTRMSLKAAAGGSGHVLLGHASVVQPITNH---------ELFPKNSLFVYSELVR 1298
Query: 966 SEYALLLFGGNLIPSKTGEGIEMLGGYL 993
+Y L+F N+ ++ + + GG L
Sbjct: 1299 QDYINLMFLTNVSHLESPLVLALFGGSL 1326
Score = 270 (100.1 bits), Expect = 2.3e-73, Sum P(2) = 2.3e-73
Identities = 75/220 (34%), Positives = 113/220 (51%)
Query: 207 NLLNSSQGNVPVNDSGIESSEVARRPKLSVKVANTISPPQSDS------AKERLNVILKE 260
+L +SS G + V S I S V R P +V+ ++ P S A+ LN L
Sbjct: 506 SLDSSSLGTMTVPRS-IRSQVVQRLPASAVEHFHSNRPGARRSLWMHPLARSSLNRRLAA 564
Query: 261 RQEKLKSSDSGKAMLSFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILE 320
R E ++ + + + R LP K + + L V + +V G TG GK+TQ+PQ IL+
Sbjct: 565 RLEAYQADRHLEHIRAQRASLPMNKHRKQLLNLVEGSHFCIVIGATGSGKSTQVPQIILD 624
Query: 321 EELSSLRGADCNIICTQPXXXXXXXXXXXXXXERGENLGETVGYQIRLESK---RSAQTR 377
+ + RGAD I+C QP ERGE LGE+VG++IR +++ R T
Sbjct: 625 DAIKQGRGADTRILCLQPRRAAAMWVAQRVASERGERLGESVGFRIRFDARLANRQGGT- 683
Query: 378 LLFCTTGVLLRQLVE--DPDLSCVSHLLVDEIHERGMNED 415
+ F T G+LL+QL + L SH+++DE+HER + D
Sbjct: 684 VSFVTLGILLKQLQDGVQETLDMYSHIVIDEVHERSLELD 723
Score = 103 (41.3 bits), Expect = 2.9e-24, Sum P(2) = 2.9e-24
Identities = 40/111 (36%), Positives = 54/111 (48%)
Query: 879 SKGPSAYNRYSHDLEMVCAILCAGLYPNV-VQCKRKGKRAVFYTKE--VGQVAL-HPSSV 934
S G N S + +++ A+L GLYPNV V+ R R G V L H S V
Sbjct: 1217 SPGGVELNVNSGNEQLLKALLVKGLYPNVAVKVARSPTRMSLKAAAGGSGHVLLGHASVV 1276
Query: 935 N--ANQNNFPLPYM-VYSEMVKTNNINVYDSTNISEY----ALLLFGGNLI 978
N FP + VYSE+V+ + IN+ TN+S L LFGG+L+
Sbjct: 1277 QPITNHELFPKNSLFVYSELVRQDYINLMFLTNVSHLESPLVLALFGGSLL 1327
>ZFIN|ZDB-GENE-030131-8589 [details] [associations]
symbol:dhx16 "DEAH (Asp-Glu-Ala-His) box
polypeptide 16" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0035987
"endodermal cell differentiation" evidence=IMP] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-030131-8589 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 HOVERGEN:HBG039428 CTD:8449 OrthoDB:EOG4VHK5Q
GO:GO:0035987 EMBL:BC045393 IPI:IPI00495801 RefSeq:NP_956318.1
UniGene:Dr.76186 ProteinModelPortal:Q7ZVV8 STRING:Q7ZVV8
PRIDE:Q7ZVV8 GeneID:336645 KEGG:dre:336645 InParanoid:Q7ZVV8
NextBio:20811846 ArrayExpress:Q7ZVV8 Bgee:Q7ZVV8 Uniprot:Q7ZVV8
Length = 1054
Score = 485 (175.8 bits), Expect = 3.5e-73, Sum P(2) = 3.5e-73
Identities = 134/410 (32%), Positives = 218/410 (53%)
Query: 529 EAWSAEQIDLGLVESTIEYICRHEGDGAILVFLTGWNDISKLLDQIKVN-KFLGDP-NKF 586
+A A+ ++ +V ++ + GD +LVFLTG +I + ++ + LG ++
Sbjct: 598 KAPEADYLEACVVSVLQIHVTQSPGD--VLVFLTGQEEIEACCELLQERCRRLGSKISEL 655
Query: 587 LVLPLHGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDA 646
LVLP++ ++P+ Q +IF+ PP RK+V+ATNIAE+S+TID ++YV+D G K+ SY+A
Sbjct: 656 LVLPIYANLPSDMQAKIFNPTPPGARKVVVATNIAETSLTIDGIIYVIDPGFCKQKSYNA 715
Query: 647 LNKLACLLPSWISKASAHQRRGRAGRVQPGVCYKLYPR-IIHDAMLPYQLPEILRTPLQE 705
+ L+ + S+ASA+QR GRAGRV G C++LY M +PEI RT L
Sbjct: 716 KTGMESLIVTPCSRASANQRAGRAGRVAAGKCFRLYTAWAFKHEMEETTVPEIQRTNLGN 775
Query: 706 LCLHIKSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPV 765
+ L +KSL + + F + PP + A+E L +GAL+ + LT LGR + LPV
Sbjct: 776 VVLLLKSLGINDLIHF--DFMDPPPHETLVLALEQLYALGALNHLGELTKLGRRMAELPV 833
Query: 766 DPNIGKMLLMGAIFQCLNPALTIAAALAHRNP-FVLPVNMQKEVDEAKRSFAGDSCSDHI 824
DP + KM+L ++C LTIAA L+ N F P + D A+ +F DH+
Sbjct: 834 DPMLSKMILASEQYKCSEEVLTIAAMLSVNNSIFYRPKDKVVHADNARMNFVVPG-GDHL 892
Query: 825 ALLKAFDGYKDAKRNRRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGF-VDKSKGPS 883
LL + + ++ + + +C+ENF+ +++ D+R Q L+ I + S G S
Sbjct: 893 VLLNVYTQWVESGYSTQ---WCFENFIQFRSMKRARDVRDQLEGLMDRIEVELCSSNGDS 949
Query: 884 AYNRYSHDLEMVCAILCAGLYPNVVQCKRKGKRAVFYTKEVGQVALHPSS 933
R + + AG + + + + G + V K V +HP+S
Sbjct: 950 MPIRKA---------VTAGYFYHTARLSKGGYKTV---KHQQTVYVHPNS 987
Score = 340 (124.7 bits), Expect = 3.5e-73, Sum P(2) = 3.5e-73
Identities = 75/211 (35%), Positives = 111/211 (52%)
Query: 259 KERQEKLKSSDSGKAMLS-FREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQF 317
KE + +L ++ K + R LP F + + L A+ ++Q+LV+ GETG GKTTQ+PQ+
Sbjct: 389 KESEPELSQAEKQKQSIQEVRRSLPIFPYREDLLAAIGDHQILVIEGETGSGKTTQIPQY 448
Query: 318 ILEEELSSLRGADCNIICTQPXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTR 377
+LEE + +G I CTQP E LG VGY IR E S +T
Sbjct: 449 LLEEGYT--KGG-MKIGCTQPRRVAAMSVAARVAQEMSVKLGNEVGYSIRFEDCTSERTI 505
Query: 378 LLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMS 437
L + T G+LLR+ + +PDL+ S +++DE HER ++ D S
Sbjct: 506 LKYMTDGMLLREFLTEPDLASYSVIIIDEAHERTLHTDILFGLIKDIARFRPDLKVLVAS 565
Query: 438 ATINADLFSKYFGNAPTVHIPGLTFPVTDLF 468
AT++ + FS +F +AP IPG FPV D++
Sbjct: 566 ATLDTERFSSFFDDAPVFRIPGRRFPV-DIY 595
>WB|WBGene00003389 [details] [associations]
symbol:mog-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0042127 "regulation of cell proliferation"
evidence=IMP] [GO:0040020 "regulation of meiosis" evidence=IMP]
[GO:0007281 "germ cell development" evidence=IMP] [GO:0040022
"feminization of hermaphroditic germ-line" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0006898 GO:GO:0002119
GO:GO:0008380 GO:GO:0006397 GO:GO:0010171 GO:GO:0003676
GO:GO:0042127 GO:GO:0007281 GO:GO:0040020 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0040022 GO:GO:0008026 HOGENOM:HOG000175261
EMBL:Z29560 KO:K12815 EMBL:AF120269 PIR:F88570 PIR:S41025
RefSeq:NP_499212.1 UniGene:Cel.5743 ProteinModelPortal:P34498
SMR:P34498 IntAct:P34498 STRING:P34498 PaxDb:P34498 PRIDE:P34498
EnsemblMetazoa:K03H1.2 GeneID:176409 KEGG:cel:CELE_K03H1.2
UCSC:K03H1.2.1 CTD:176409 WormBase:K03H1.2
GeneTree:ENSGT00700000104877 InParanoid:P34498 OMA:PSRSTWE
NextBio:892452 Uniprot:P34498
Length = 1131
Score = 506 (183.2 bits), Expect = 4.0e-73, Sum P(3) = 4.0e-73
Identities = 134/405 (33%), Positives = 208/405 (51%)
Query: 554 DGAILVFLTGWNDISKLLDQIKVNKF--LGDPNKFLVLPLHGSMPTINQREIFDRPPPNK 611
DG IL+F+ G DI + IK K L + VLP++ +P+ Q +IF R P
Sbjct: 650 DGDILIFMPGQEDIECTCEMIK-EKLGELDEAPPLAVLPIYSQLPSDLQAKIFQRAPGGM 708
Query: 612 RKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAG 671
RK ++ATNIAE+S+T+D +++V+D G K Y+ + L +S+ASA+QR GRAG
Sbjct: 709 RKAIVATNIAETSLTVDGILFVIDPGFCKMKVYNPRIGMDALSIFPVSQASANQRTGRAG 768
Query: 672 RVQPGVCYKLYP-RIIHDAMLPYQLPEILRTPLQELCLHIKSLQLGTVGSFLSKALQPPD 730
R PG CY+LY R D +L +PEI RT L + L +KSL + + F P D
Sbjct: 769 RTGPGQCYRLYTERQFKDELLKSTVPEIQRTNLANVVLLLKSLGVDDLLKFHFMDAPPQD 828
Query: 731 PLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGKMLLMGAIFQCLNPALTIAA 790
+ N++ L T+GALD+ LTP+GR + P+DP + KML+M A C + LTI +
Sbjct: 829 NML--NSMYQLWTLGALDNTGQLTPMGRKMVEFPLDPTLSKMLIMSAEMGCSDEVLTIVS 886
Query: 791 ALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAKRNRRERDFCWENF 850
L+ F P ++E D K F SDH+ L + ++ K + + +C +N+
Sbjct: 887 MLSVPAIFFRPKGREEEADAKKEKFQVPE-SDHLTFLNVYIQWRTHKYSAK---WCADNY 942
Query: 851 LSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYSHDLEMVCAILCAGLYPNVVQC 910
L L+ + ++R+Q +++ D+ K P N D+ C +C+ + N +
Sbjct: 943 LHVKALKKVREVRAQLKEIMQDL------KLPLISNGSEWDIVRKC--ICSAYFHNAARL 994
Query: 911 KRKGKRAVFYTKEVG-QVALHPSSVNANQNNFPLPYMVYSEMVKT 954
K G+ + G LHP+S P Y+VY E++ T
Sbjct: 995 KGIGE---YVNVRTGIPCFLHPTSALFGMGFMP-DYVVYHELIMT 1035
Score = 327 (120.2 bits), Expect = 4.0e-73, Sum P(3) = 4.0e-73
Identities = 82/237 (34%), Positives = 116/237 (48%)
Query: 237 KVANTISPPQSDSAK-ERLNVILKERQEKLKSSDSG--KAMLSFREKLPAFKMKAEFLKA 293
K T P DS + + ++ SD K++ RE LP F + + +
Sbjct: 394 KKDETADPEDDDSGNYKESHQFASHMKDNEAVSDFAMEKSIKQQREYLPVFACRQKMMNV 453
Query: 294 VAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNII-CTQPXXXXXXXXXXXXXX 352
+ EN V+++ GETG GKTTQL Q++LE+ D +I CTQP
Sbjct: 454 IRENNVVIIVGETGSGKTTQLAQYLLEDGFG-----DSGLIGCTQPRRVAAMSVARRVAD 508
Query: 353 ERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGM 412
E G +LG+ VGY IR E S +T + + T G+LLR+ + D L S +++DE HER +
Sbjct: 509 EMGVDLGQDVGYAIRFEDCTSEKTIIKYMTDGILLRECLGDGSLDQYSAIIMDEAHERSL 568
Query: 413 NEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYFG-NAPTVHIPGLTFPVTDLF 468
N D SAT++AD F+ +FG N PT IPG TFPV +LF
Sbjct: 569 NTDVLFGLLREVIAKRADLKLIVTSATMDADKFADFFGGNCPTFTIPGRTFPV-ELF 624
Score = 38 (18.4 bits), Expect = 4.0e-73, Sum P(3) = 4.0e-73
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 183 DLDERHGSTEKELQMSIETER 203
D D+R GS+ K + T R
Sbjct: 140 DQDDREGSSRKRNSWDMPTPR 160
>UNIPROTKB|P34498 [details] [associations]
symbol:mog-1 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-1" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0009792 GO:GO:0006898
GO:GO:0002119 GO:GO:0008380 GO:GO:0006397 GO:GO:0010171
GO:GO:0003676 GO:GO:0042127 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0040022 GO:GO:0008026
HOGENOM:HOG000175261 EMBL:Z29560 KO:K12815 EMBL:AF120269 PIR:F88570
PIR:S41025 RefSeq:NP_499212.1 UniGene:Cel.5743
ProteinModelPortal:P34498 SMR:P34498 IntAct:P34498 STRING:P34498
PaxDb:P34498 PRIDE:P34498 EnsemblMetazoa:K03H1.2 GeneID:176409
KEGG:cel:CELE_K03H1.2 UCSC:K03H1.2.1 CTD:176409 WormBase:K03H1.2
GeneTree:ENSGT00700000104877 InParanoid:P34498 OMA:PSRSTWE
NextBio:892452 Uniprot:P34498
Length = 1131
Score = 506 (183.2 bits), Expect = 4.0e-73, Sum P(3) = 4.0e-73
Identities = 134/405 (33%), Positives = 208/405 (51%)
Query: 554 DGAILVFLTGWNDISKLLDQIKVNKF--LGDPNKFLVLPLHGSMPTINQREIFDRPPPNK 611
DG IL+F+ G DI + IK K L + VLP++ +P+ Q +IF R P
Sbjct: 650 DGDILIFMPGQEDIECTCEMIK-EKLGELDEAPPLAVLPIYSQLPSDLQAKIFQRAPGGM 708
Query: 612 RKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAG 671
RK ++ATNIAE+S+T+D +++V+D G K Y+ + L +S+ASA+QR GRAG
Sbjct: 709 RKAIVATNIAETSLTVDGILFVIDPGFCKMKVYNPRIGMDALSIFPVSQASANQRTGRAG 768
Query: 672 RVQPGVCYKLYP-RIIHDAMLPYQLPEILRTPLQELCLHIKSLQLGTVGSFLSKALQPPD 730
R PG CY+LY R D +L +PEI RT L + L +KSL + + F P D
Sbjct: 769 RTGPGQCYRLYTERQFKDELLKSTVPEIQRTNLANVVLLLKSLGVDDLLKFHFMDAPPQD 828
Query: 731 PLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGKMLLMGAIFQCLNPALTIAA 790
+ N++ L T+GALD+ LTP+GR + P+DP + KML+M A C + LTI +
Sbjct: 829 NML--NSMYQLWTLGALDNTGQLTPMGRKMVEFPLDPTLSKMLIMSAEMGCSDEVLTIVS 886
Query: 791 ALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAKRNRRERDFCWENF 850
L+ F P ++E D K F SDH+ L + ++ K + + +C +N+
Sbjct: 887 MLSVPAIFFRPKGREEEADAKKEKFQVPE-SDHLTFLNVYIQWRTHKYSAK---WCADNY 942
Query: 851 LSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYSHDLEMVCAILCAGLYPNVVQC 910
L L+ + ++R+Q +++ D+ K P N D+ C +C+ + N +
Sbjct: 943 LHVKALKKVREVRAQLKEIMQDL------KLPLISNGSEWDIVRKC--ICSAYFHNAARL 994
Query: 911 KRKGKRAVFYTKEVG-QVALHPSSVNANQNNFPLPYMVYSEMVKT 954
K G+ + G LHP+S P Y+VY E++ T
Sbjct: 995 KGIGE---YVNVRTGIPCFLHPTSALFGMGFMP-DYVVYHELIMT 1035
Score = 327 (120.2 bits), Expect = 4.0e-73, Sum P(3) = 4.0e-73
Identities = 82/237 (34%), Positives = 116/237 (48%)
Query: 237 KVANTISPPQSDSAK-ERLNVILKERQEKLKSSDSG--KAMLSFREKLPAFKMKAEFLKA 293
K T P DS + + ++ SD K++ RE LP F + + +
Sbjct: 394 KKDETADPEDDDSGNYKESHQFASHMKDNEAVSDFAMEKSIKQQREYLPVFACRQKMMNV 453
Query: 294 VAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNII-CTQPXXXXXXXXXXXXXX 352
+ EN V+++ GETG GKTTQL Q++LE+ D +I CTQP
Sbjct: 454 IRENNVVIIVGETGSGKTTQLAQYLLEDGFG-----DSGLIGCTQPRRVAAMSVARRVAD 508
Query: 353 ERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGM 412
E G +LG+ VGY IR E S +T + + T G+LLR+ + D L S +++DE HER +
Sbjct: 509 EMGVDLGQDVGYAIRFEDCTSEKTIIKYMTDGILLRECLGDGSLDQYSAIIMDEAHERSL 568
Query: 413 NEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYFG-NAPTVHIPGLTFPVTDLF 468
N D SAT++AD F+ +FG N PT IPG TFPV +LF
Sbjct: 569 NTDVLFGLLREVIAKRADLKLIVTSATMDADKFADFFGGNCPTFTIPGRTFPV-ELF 624
Score = 38 (18.4 bits), Expect = 4.0e-73, Sum P(3) = 4.0e-73
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 183 DLDERHGSTEKELQMSIETER 203
D D+R GS+ K + T R
Sbjct: 140 DQDDREGSSRKRNSWDMPTPR 160
>SGD|S000001794 [details] [associations]
symbol:PRP16 "DEAH-box RNA helicase involved in second
catalytic step of splicing" species:4932 "Saccharomyces cerevisiae"
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0000350 "generation of catalytic
spliceosome for second transesterification step" evidence=IMP]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0071007 "U2-type catalytic step 2 spliceosome" evidence=IDA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IDA]
[GO:0000386 "second spliceosomal transesterification activity"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 SGD:S000001794 GO:GO:0005524 GO:GO:0003676
EMBL:BK006944 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0071007 EMBL:Z27116 GO:GO:0008186
RefSeq:NP_013012.3 GeneID:853961 KEGG:sce:YKR086W KO:K12815
GO:GO:0000350 GeneTree:ENSGT00700000104877 OrthoDB:EOG4GQTD2
EMBL:M31524 EMBL:Z28311 PIR:S38164 RefSeq:NP_013014.3
ProteinModelPortal:P15938 SMR:P15938 DIP:DIP-2824N IntAct:P15938
MINT:MINT-1699731 STRING:P15938 PaxDb:P15938 PeptideAtlas:P15938
EnsemblFungi:YKR086W GeneID:853963 KEGG:sce:YKR088C CYGD:YKR086w
OMA:IDCGYSK NextBio:975386 Genevestigator:P15938 GermOnline:YKR086W
Uniprot:P15938
Length = 1071
Score = 483 (175.1 bits), Expect = 5.0e-73, Sum P(2) = 5.0e-73
Identities = 144/439 (32%), Positives = 213/439 (48%)
Query: 555 GAILVFLTGWNDISKLLD-------QIKVNKF----LGDPNKFLVLPLHGSMPTINQREI 603
G IL+F+TG DI D Q+ KF + N +LP++ ++P Q +I
Sbjct: 564 GDILIFMTGQEDIETTFDTLQEKFLQVYSKKFGTANFEEINDIEILPIYSALPADLQFKI 623
Query: 604 FDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASA 663
F KRKI++ATNIAE+S+TI + YV+DCG +K Y+ L L+ + ISKA+A
Sbjct: 624 FQDLHGTKRKIIIATNIAETSLTIKGIRYVIDCGYSKLKVYNPKIGLDSLVITPISKANA 683
Query: 664 HQRRGRAGRVQPGVCYKLYPR-IIHDAMLPYQLPEILRTPLQELCLHIKSLQLGTVGSFL 722
QR GRAGR PG Y+LY + M +PEI RT L L +KSL + S
Sbjct: 684 DQRSGRAGRTAPGTAYRLYTEDTFKEDMYLQTIPEIQRTNLSNTLLLLKSLDVTDELSKF 743
Query: 723 SKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGKMLLMGAIFQCL 782
+PP + + EL IGA+D LTPLG + P+ P++ K+LL+ C
Sbjct: 744 PFIDKPPLQTFLSSLYELW-FIGAIDTSGQLTPLGLQMAKFPLQPSLSKILLIAVRNGCS 802
Query: 783 NPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAKRNRRE 842
+ LTI + L+ F P QKE D A+ F + SDH+ LL F+ ++ N
Sbjct: 803 DEMLTIVSMLSVPQVFYRPKERQKEADIARNKFF-IAKSDHLTLLNVFEQWR---ANNFS 858
Query: 843 RDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYSHDLEMVCAILCAG 902
+C ++F+ +L D+R Q L +L K P + D+ C +C+G
Sbjct: 859 SHWCNKHFVQYKSLVRARDIRDQLLTILKS------QKIPVISSGKDWDIIKKC--ICSG 910
Query: 903 LYPNVVQCKRKGKRAVFYTKEVGQVALHPSSVNANQNNFPLPYMVYSEMVKTNNINVYDS 962
K G R + K V LHP+S + P PY+VY E++ T+ +
Sbjct: 911 FAHQAA--KITGLRNYVHLKTGVSVQLHPTSALHGLGDLP-PYVVYHELLMTSKEYICCV 967
Query: 963 TNISEYALLLFGGNLIPSK 981
T++ + L+ +GG L K
Sbjct: 968 TSVDPFWLMEYGGLLYDIK 986
Score = 341 (125.1 bits), Expect = 5.0e-73, Sum P(2) = 5.0e-73
Identities = 75/198 (37%), Positives = 108/198 (54%)
Query: 278 REKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQ 337
+E+LP F+ +++ L + ENQV+V+ GETG GKTTQL Q++ EE ++ RG +I+ TQ
Sbjct: 347 KEQLPVFRCRSQLLSLIRENQVVVIIGETGSGKTTQLAQYLYEEGYANDRGK--SIVVTQ 404
Query: 338 PXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQ-TRLLFCTTGVLLRQLVEDPDL 396
P E LG+ VGY IR E ++ T+L F T G+LLR+ + D L
Sbjct: 405 PRRVAAISVAKRVAMEMQVPLGKEVGYSIRFEDVTDSECTKLKFVTDGILLRETLLDDTL 464
Query: 397 SCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGNAPTVH 456
S +++DE HER +N D SAT+NA FS +FGNAP
Sbjct: 465 DKYSCVIIDEAHERSLNTDILLGFFKILLARRRDLKLIITSATMNAKKFSAFFGNAPQFT 524
Query: 457 IPGLTFPVTDLFLEDVLE 474
IPG TFPV ++ + ++
Sbjct: 525 IPGRTFPVQTIYTSNPVQ 542
>UNIPROTKB|G4N1N4 [details] [associations]
symbol:MGG_07501 "ATP-dependent RNA helicase DHX8"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:CM001233 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12813 RefSeq:XP_003711413.1
EnsemblFungi:MGG_07501T0 GeneID:2683421 KEGG:mgr:MGG_07501
Uniprot:G4N1N4
Length = 1016
Score = 490 (177.5 bits), Expect = 8.9e-73, Sum P(2) = 8.9e-73
Identities = 140/419 (33%), Positives = 215/419 (51%)
Query: 543 STIEYICRHEGDGAILVFLTGWNDISKLLDQI-KVNKFLGDPNKFLVL-PLHGSMPTINQ 600
+T+ I + G IL+FLTG ++I QI + + LG K LV+ P++ ++P+ Q
Sbjct: 571 TTVFQIHTTQPKGDILIFLTGQDEIEAAEMQITETARKLGSRVKELVICPIYANLPSELQ 630
Query: 601 REIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISK 660
+IF+ P N RK+VLATNIAE+S+TID +VYV+D G KE Y+ ++ L+ S+
Sbjct: 631 SKIFEPTPENARKVVLATNIAETSLTIDGIVYVIDPGYVKENVYNPATGMSNLVVVPCSR 690
Query: 661 ASAHQRRGRAGRVQPGVCYKLYPRIIH-DAMLPYQLPEILRTPLQELCLHIKSLQLGTVG 719
ASA+QR GRAGRV PG C++LY + + + M PEI RT L + L +KSL + +
Sbjct: 691 ASANQRSGRAGRVGPGKCFRLYTKYAYMNEMEESTTPEIQRTNLNGVVLQLKSLGINELL 750
Query: 720 SFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGKMLLMGAIF 779
F + + PP A+ A+ L + L+ LT LGR + P DP + K +L
Sbjct: 751 DF--EFMDPPPTEALIGALNQLFALQGLNHKGELTKLGRQMAEFPTDPMLAKAVLAADKE 808
Query: 780 QCLNPALTIAAALAHRNP-FVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAKR 838
C+ L+I A L+ + F P + Q D A+ F DH+ LL ++ + D+
Sbjct: 809 GCVEEVLSIVAMLSEASALFFRPKDKQVHADAARGRFTVKEGGDHVTLLNIWNQWLDSDY 868
Query: 839 NRRERDFCW--ENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYSHDLEMVC 896
+ W ENFL +L D+R Q L + + G + ++ +
Sbjct: 869 SP-----IWSKENFLQQRSLTRARDVREQLSKLCERVEVTLSTCGGIS------NMPPIK 917
Query: 897 AILCAGLYPNVVQCKRKGKRAVFYTKEVGQVALHPSSVNANQNNFPLPYMV-YSEMVKT 954
+ AG +PN + +R G + K V +HPSSV ++ P P MV Y E+V+T
Sbjct: 918 RAITAGFFPNAARMQRSGD-SYRTVKNNTTVYIHPSSVMMQED--PPPRMVIYYELVQT 973
Score = 330 (121.2 bits), Expect = 8.9e-73, Sum P(2) = 8.9e-73
Identities = 73/196 (37%), Positives = 104/196 (53%)
Query: 273 AMLSFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCN 332
+M R+ LP + + EFL A+ + Q+LV+ GETG GKTTQLPQ++ E +
Sbjct: 365 SMQETRKSLPIYVYRDEFLAALEQYQILVIVGETGSGKTTQLPQYLHEAGYTK---DGMR 421
Query: 333 IICTQPXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVE 392
+ CTQP E G +G VGY IR E S +T L + T G+LLR+ +
Sbjct: 422 VGCTQPRRVAAMSVAARVADEMGVKVGNEVGYSIRFEDNTSDKTILKYMTDGMLLREFMT 481
Query: 393 DPDLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGNA 452
+PDLS S L++DE HER ++ D SAT+NA+ F+ YF +A
Sbjct: 482 EPDLSSYSALMIDEAHERTVHTDILLALVKDLARERKDLKLLISSATMNAEKFASYFDDA 541
Query: 453 PTVHIPGLTFPVTDLF 468
P +IPG +PV D++
Sbjct: 542 PIFNIPGRRYPV-DIY 556
Score = 42 (19.8 bits), Expect = 1.8e-42, Sum P(2) = 1.8e-42
Identities = 14/58 (24%), Positives = 29/58 (50%)
Query: 244 PPQSDSA-KERLNVILKERQEKLKSSDSGKAMLSFRE---KLPAFKMKAEFLKAVAEN 297
P Q D +++ K+R++K K S S + S R + PA + ++ ++ A++
Sbjct: 11 PMQDDEVGPQKVKKSSKDRRDKKKESSSSRHSRSHRRSRSRSPARESSSKHYRSRAKD 68
>ASPGD|ASPL0000070923 [details] [associations]
symbol:AN4721 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003723
EMBL:BN001303 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 EMBL:AACD01000080 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
OMA:NAWCYEN OrthoDB:EOG45TGW9 RefSeq:XP_662325.1
ProteinModelPortal:Q5B409 EnsemblFungi:CADANIAT00005708
GeneID:2872518 KEGG:ani:AN4721.2 Uniprot:Q5B409
Length = 1241
Score = 497 (180.0 bits), Expect = 1.1e-72, Sum P(2) = 1.1e-72
Identities = 133/406 (32%), Positives = 211/406 (51%)
Query: 533 AEQIDLGLVESTIEYICRHEGDGAILVFLTGWNDISKLLDQIKVN-KFLGDPN--KFLVL 589
++ +D L+ T+ I E G +L+FLTG +I + + K LG P+ + ++L
Sbjct: 766 SDYLDAALI--TVMQIHLTEPPGDMLLFLTGQEEIDTACEILYERMKALG-PSVPELVIL 822
Query: 590 PLHGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNK 649
P++ ++P+ Q IFD PP RK+V+ATNIAE+SITID++ YV+D G K+ +YD
Sbjct: 823 PVYSALPSEMQSRIFDPAPPGGRKVVIATNIAETSITIDNIYYVIDPGFVKQKAYDPKLG 882
Query: 650 LACLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDA-MLPYQLPEILRTPLQELCL 708
+ L+ + IS+A A QR GRAGR PG C++LY + + MLP +P+I R L L
Sbjct: 883 MDSLVVTPISQAQAKQRAGRAGRTGPGKCFRLYTEAAYQSEMLPTTIPDIQRQNLSHTIL 942
Query: 709 HIKSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPN 768
+K++ + + F + PP + A+E L + ALDD LT LGR + P++P
Sbjct: 943 MLKAMGINDLLHF--DFMDPPPTNTMLTALEELYALSALDDEGLLTRLGRKMADFPMEPA 1000
Query: 769 IGKMLLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLK 828
+ K+L+ C L+I A L+ ++ F P Q++ D+ K F D DH+ LL
Sbjct: 1001 LAKVLIASVDMGCSEEMLSIVAMLSIQSVFYRPKEKQQQADQKKAKFH-DPHGDHLTLLN 1059
Query: 829 AFDGYKDAKRNRRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRY 888
++ +K R+ +C+ENF+ ++ +D+R Q L ++ S G
Sbjct: 1060 VYNAWK---RSGFSNAWCYENFIQARQIRRAQDVRQQLLGIMQRYHHKIVSCG------- 1109
Query: 889 SHDLEMVCAILCAGLYPNVVQCKRKGKRAVFYTKEVGQ-VALHPSS 933
+ V LC G + N RK + + T G V +HPSS
Sbjct: 1110 -RNTTKVRQALCTGFFRNSA---RKDPQEGYKTLVEGTPVYMHPSS 1151
Score = 326 (119.8 bits), Expect = 1.1e-72, Sum P(2) = 1.1e-72
Identities = 74/194 (38%), Positives = 106/194 (54%)
Query: 278 REKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQ 337
RE LP +K + + L+AVAENQ+L+V G+TG GKTTQ+ Q++ E ++ +G I CTQ
Sbjct: 574 RESLPVYKFRQQLLEAVAENQLLIVVGDTGSGKTTQVTQYLAEAGWAN-KGI---IGCTQ 629
Query: 338 PXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVEDPDLS 397
P E G LG VGY IR E S +T++ + T G+L R+++ DPDL
Sbjct: 630 PRRVAAMSVAKRVAEEVGCKLGAEVGYTIRFEDCTSPETKIKYMTDGMLQREVLLDPDLK 689
Query: 398 CVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGNAPTVHI 457
S +++DE HER + D SAT++AD FS+YF P I
Sbjct: 690 KYSVIMLDEAHERTIATDVLFGLLKTTLKRRPDLRLIVTSATLDADKFSEYFYGCPIFSI 749
Query: 458 PGLTFPVTDLFLED 471
PG TFPV ++ ++
Sbjct: 750 PGRTFPVEIMYSKE 763
>RGD|1311165 [details] [associations]
symbol:Dhx35 "DEAH (Asp-Glu-Ala-His) box polypeptide 35"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA;ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 RGD:1311165 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00700000104241 KO:K13117
OMA:NIFVVPP CTD:60625 EMBL:CH474005 IPI:IPI00764730
RefSeq:NP_001102071.1 UniGene:Rn.118078 Ensembl:ENSRNOT00000021435
GeneID:362260 KEGG:rno:362260 UCSC:RGD:1311165 NextBio:679233
Uniprot:D4AEG5
Length = 679
Score = 501 (181.4 bits), Expect = 1.8e-72, Sum P(3) = 1.8e-72
Identities = 125/392 (31%), Positives = 205/392 (52%)
Query: 541 VESTIEYICR-H--EGDGAILVFLTGWNDI----SKLLDQIKVNKFLGDPNKFLVLPLHG 593
+++T++ + + H EGDG IL FLTG ++ S L++Q + G VLP++
Sbjct: 258 IKATVDTVVKIHQTEGDGDILAFLTGQEEVETVVSMLIEQARALARTGMKKHLRVLPMYA 317
Query: 594 SMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACL 653
+P+ Q ++F+R + RK+++ATN+AE+SITI +VYV+DCG K +Y+ + CL
Sbjct: 318 GLPSFEQMKVFERVSHSVRKVIVATNVAETSITISGIVYVIDCGFMKLRAYNPRTAIECL 377
Query: 654 LPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQLPEILRTPLQELCLHIKSL 713
+ +S+ASA+QR GR GR + G CY+LY + + +PE+ R+ L + L +K+L
Sbjct: 378 VVVPVSQASANQRAGRGGRNRSGKCYRLYTEEAFEQLPQSTVPEMQRSNLAPVVLQLKAL 437
Query: 714 QLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLT-PLGRHLCTLPVDPNIGKM 772
+ +V F + PP ++ A+ELL +G LD LT PLG + P++P KM
Sbjct: 438 GIDSVLRF--HFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEFPLNPMFAKM 495
Query: 773 LLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDG 832
LL F C L+IAA + +N FV P N + + R FA + DH+ +L ++
Sbjct: 496 LLESGNFGCSQEILSIAAMMQIQNVFVFPSNQKSQATRVHRKFAVEE-GDHLTMLNVYEA 554
Query: 833 YKDAKRNRRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYSHDL 892
+ K N+ + +C E+FL+ L +R Q LL K + P + D
Sbjct: 555 F--IKHNKSSQ-WCQEHFLNYKGLVRAATVRDQLKKLLV------KFQVPKMSSEGDPDP 605
Query: 893 EMVCAILCAGLYPNVVQCKRKGKRAVFYTKEV 924
+ C + +G + N + G V Y + +
Sbjct: 606 VLRCIV--SGFFANAARFHSTGAYRVIYNEVI 635
Score = 250 (93.1 bits), Expect = 1.8e-72, Sum P(3) = 1.8e-72
Identities = 67/202 (33%), Positives = 98/202 (48%)
Query: 278 REKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQ 337
R+KLP FK++ L V Q +V+ GETGCGK+TQ+PQ++ E ++ G + TQ
Sbjct: 51 RQKLPVFKLRNHILYLVENYQTVVIVGETGCGKSTQVPQYLAEAGWTA-EGRVVGV--TQ 107
Query: 338 PXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSA-QTRLLFCTTGVLLRQLVEDPDL 396
P ERG LG VGY IR + TR+ F T G+L+R+++ DP L
Sbjct: 108 PRRVAAVTVAGRVADERGAVLGHEVGYCIRFDDCTDPLATRIKFLTDGMLVREMMVDPLL 167
Query: 397 SCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGNAPT-- 454
+ S +++DE HER + D SAT++A+ F +F T
Sbjct: 168 TKYSVVMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDAEKFRDFFNQNETSD 227
Query: 455 --------VHIPGLTFPVTDLF 468
+ + G TFPV D+F
Sbjct: 228 PARDTCVILTVEGRTFPV-DIF 248
Score = 39 (18.8 bits), Expect = 1.8e-72, Sum P(3) = 1.8e-72
Identities = 10/27 (37%), Positives = 18/27 (66%)
Query: 946 MVYSEMVKTNNINVYDSTNISEYALLL 972
++Y+E+++T+ + D T I E A LL
Sbjct: 629 VIYNEVIQTSKYYMRDVTAI-ESAWLL 654
>UNIPROTKB|F1PGL2 [details] [associations]
symbol:DHX16 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12813
GeneTree:ENSGT00700000104241 OMA:GTLHREF CTD:8449 EMBL:AAEX03008197
RefSeq:XP_538827.2 Ensembl:ENSCAFT00000000685 GeneID:481706
KEGG:cfa:481706 Uniprot:F1PGL2
Length = 1042
Score = 475 (172.3 bits), Expect = 2.1e-72, Sum P(2) = 2.1e-72
Identities = 136/409 (33%), Positives = 212/409 (51%)
Query: 529 EAWSAEQIDLGLVESTIEYICRHEGDGAILVFLTGWNDISKLLDQIKVN-KFLGDP-NKF 586
+A A+ ++ +V ++ + GD ILVFLTG +I + ++ + LG +
Sbjct: 586 KAPEADYLEACVVSVLQIHVTQPPGD--ILVFLTGQEEIEAACEMLQDRCRRLGSKIREL 643
Query: 587 LVLPLHGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDA 646
LVLP++ ++P+ Q IF PP RK+V+ATNIAE+S+TI+ ++YV+D G K+ SY+
Sbjct: 644 LVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNP 703
Query: 647 LNKLACLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQ-LPEILRTPLQE 705
+ L + SKASA+QR GRAGRV G C++LY + L +PEI RT L
Sbjct: 704 RTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGN 763
Query: 706 LCLHIKSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPV 765
+ L +KSL + + F L PP + A+E L +GAL+ + LT GR + LPV
Sbjct: 764 VVLLLKSLGIHDLMHF--DFLDPPPYETLLLALEQLYALGALNHLGELTTSGRKMAELPV 821
Query: 766 DPNIGKMLLMGAIFQCLNPALTIAAALAHRNP-FVLPVNMQKEVDEAKRSFAGDSCSDHI 824
DP + KM+L + C LT+AA L+ N F P + D A+ +F DH+
Sbjct: 822 DPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNARVNFFLPG-GDHL 880
Query: 825 ALLKAFDGYKDAKRNRRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSA 884
LL + + ++ + + +C+ENF+ +++ D+R Q LL + V S
Sbjct: 881 VLLNVYTQWAESGYSSQ---WCYENFVQFRSMRRARDVREQLEGLLERVE-VGLSSCQGD 936
Query: 885 YNRYSHDLEMVCAILCAGLYPNVVQCKRKGKRAVFYTKEVGQVALHPSS 933
Y R V + AG + + + R G R V K+ V +HP+S
Sbjct: 937 YIR-------VRKAITAGYFYHTARLTRSGYRTV---KQQQTVFIHPNS 975
Score = 343 (125.8 bits), Expect = 2.1e-72, Sum P(2) = 2.1e-72
Identities = 75/197 (38%), Positives = 106/197 (53%)
Query: 272 KAMLSFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADC 331
+++ + R LP F + E L A+A++QVL++ GETG GKTTQ+PQ++ EE + +G
Sbjct: 391 ESVQAVRRSLPVFPFREELLAAIADHQVLIIEGETGSGKTTQIPQYLFEEGYTK-KGM-- 447
Query: 332 NIICTQPXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLV 391
I CTQP E G LG VGY IR E S +T L + T G+LLR+ +
Sbjct: 448 KIACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFL 507
Query: 392 EDPDLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGN 451
+PDL+ S ++VDE HER ++ D SAT++ FS +F +
Sbjct: 508 SEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATLDTARFSTFFDD 567
Query: 452 APTVHIPGLTFPVTDLF 468
AP IPG FPV D+F
Sbjct: 568 APVFRIPGRRFPV-DIF 583
>UNIPROTKB|E1BDN4 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 KO:K13117 OMA:NIFVVPP CTD:60625
EMBL:DAAA02036576 EMBL:DAAA02036577 EMBL:DAAA02036578
IPI:IPI00707123 RefSeq:NP_001179272.1 UniGene:Bt.52291
Ensembl:ENSBTAT00000005281 GeneID:513148 KEGG:bta:513148
NextBio:20870723 Uniprot:E1BDN4
Length = 703
Score = 517 (187.1 bits), Expect = 2.1e-72, Sum P(2) = 2.1e-72
Identities = 131/402 (32%), Positives = 211/402 (52%)
Query: 541 VESTIEYICR-H--EGDGAILVFLTGWNDI----SKLLDQIKVNKFLGDPNKFLVLPLHG 593
++ST+E + + H EGDG IL FLTG ++ S L++Q + G +LP++
Sbjct: 258 IKSTVETVMKIHQTEGDGDILAFLTGQEEVETVVSMLIEQARALGQTGMKRHLRILPMYA 317
Query: 594 SMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACL 653
+P+ Q ++F+R + RK+++ATN+AE+SITI +VYV+DCG K +Y+ + CL
Sbjct: 318 GLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIECL 377
Query: 654 LPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQLPEILRTPLQELCLHIKSL 713
+ +S+ASA+QR GR GR + G CY+LY D + +PE+ R+ L + L +K+L
Sbjct: 378 VVVPVSQASANQRAGRGGRSRSGKCYRLYTEEAFDQLPQSTVPEMQRSNLAPVILQLKAL 437
Query: 714 QLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLT-PLGRHLCTLPVDPNIGKM 772
+ V F + PP ++ A+ELL +G LD LT PLG + P++P KM
Sbjct: 438 GIDNVLRF--HFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEFPLNPMFAKM 495
Query: 773 LLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDG 832
LL F C L+IAA + +N FV+P N + + A R FA + DH+ +L ++
Sbjct: 496 LLESGNFGCSQEILSIAAMMQIQNVFVVPSNQKSQAIRAHRKFAVEE-GDHLTMLNVYEA 554
Query: 833 YKDAKRNRRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYSHDL 892
+ K N+ + +C E+FL+ L +R Q LL KS D
Sbjct: 555 F--IKHNKNSQ-WCQEHFLNYKGLVRAATVREQLKKLLVKFQVPKKSS--------EGDP 603
Query: 893 EMVCAILCAGLYPNVVQCKRKGKRAVFYTKEVGQVALHPSSV 934
+ V + +G + N + G A ++ ++ +HP+SV
Sbjct: 604 DPVLRCIVSGFFANAARFHSTG--AYRTIRDDHELHIHPASV 643
Score = 256 (95.2 bits), Expect = 2.1e-72, Sum P(2) = 2.1e-72
Identities = 67/202 (33%), Positives = 100/202 (49%)
Query: 278 REKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQ 337
R+KLP FK++ L + Q +V+ GETGCGK+TQ+PQ++ E ++ G + TQ
Sbjct: 51 RQKLPVFKLRNHILYLIENYQTVVIIGETGCGKSTQIPQYLAEAGWTA-EGRVVGV--TQ 107
Query: 338 PXXXXXXXXXXXXXXERGENLGETVGYQIRLES-KRSAQTRLLFCTTGVLLRQLVEDPDL 396
P ERG LG VGY IR + TR+ F T G+L+R+++ DP L
Sbjct: 108 PRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTNPLATRIKFLTDGMLVREMMVDPLL 167
Query: 397 SCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGNA---- 452
+ S +++DE HER + D SAT++A+ F +F +
Sbjct: 168 TKYSAIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDAEKFRDFFNHNDTSD 227
Query: 453 PT------VHIPGLTFPVTDLF 468
PT + + G TFPV D+F
Sbjct: 228 PTRDTCVILTVEGRTFPV-DIF 248
Score = 239 (89.2 bits), Expect = 5.9e-38, Sum P(2) = 5.9e-38
Identities = 89/308 (28%), Positives = 141/308 (45%)
Query: 669 RAGRVQPGVCYKLYPRIIHDAMLPYQLPEILRTPLQELCLHIKSLQLGTVG--SFLS-KA 725
RAGR K Y +A QLP+ +Q L LQL +G + L
Sbjct: 390 RAGRGGRSRSGKCYRLYTEEAF--DQLPQSTVPEMQRSNLAPVILQLKALGIDNVLRFHF 447
Query: 726 LQPPDPLAVQNAIELLKTIGALDDMENLT-PLGRHLCTLPVDPNIGKMLLMGAIFQCLNP 784
+ PP ++ A+ELL +G LD LT PLG + P++P KMLL F C
Sbjct: 448 MSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQE 507
Query: 785 ALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAKRNRRERD 844
L+IAA + +N FV+P N + + A R FA + DH+ +L ++ + K N+ +
Sbjct: 508 ILSIAAMMQIQNVFVVPSNQKSQAIRAHRKFAVEE-GDHLTMLNVYEAF--IKHNKNSQ- 563
Query: 845 FCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYSHDLEMVCAILCAGLY 904
+C E+FL+ L +R Q LL KS D + V + +G +
Sbjct: 564 WCQEHFLNYKGLVRAATVREQLKKLLVKFQVPKKSS--------EGDPDPVLRCIVSGFF 615
Query: 905 PNVVQCKRKGKRAVFYTKEVGQVALHPSSVNANQNNFPLPYMVYSEMVKTNNINVYDSTN 964
N + G A ++ ++ +HP+SV + P +++Y+E+++T+ + D T
Sbjct: 616 ANAARFHSTG--AYRTIRDDHELHIHPASVLYAEK--PPRWVIYNEVIQTSKYYMRDVTA 671
Query: 965 ISEYALLL 972
I E A LL
Sbjct: 672 I-ESAWLL 678
>WB|WBGene00003392 [details] [associations]
symbol:mog-4 species:6239 "Caenorhabditis elegans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0018996
"molting cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0040020 "regulation of meiosis" evidence=IMP] [GO:0040022
"feminization of hermaphroditic germ-line" evidence=IMP]
[GO:0007281 "germ cell development" evidence=IMP] [GO:0048589
"developmental growth" evidence=IMP] [GO:0010172 "embryonic body
morphogenesis" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001482 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF00437
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0002119 GO:GO:0008380 GO:GO:0006810 GO:GO:0018996
GO:GO:0006397 GO:GO:0003676 GO:GO:0042127 GO:GO:0040035
GO:GO:0007281 GO:GO:0048589 GO:GO:0010172 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0040022 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12813 EMBL:AF286900 EMBL:Z81462
EMBL:Z81457 PIR:T18832 RefSeq:NP_497027.1 UniGene:Cel.17139
ProteinModelPortal:O45244 SMR:O45244 DIP:DIP-24771N IntAct:O45244
MINT:MINT-1105817 STRING:O45244 PaxDb:O45244 EnsemblMetazoa:C04H5.6
GeneID:175117 KEGG:cel:CELE_C04H5.6 UCSC:C04H5.6 CTD:175117
WormBase:C04H5.6 GeneTree:ENSGT00700000104241 InParanoid:O45244
OMA:GTLHREF NextBio:886834 ArrayExpress:O45244 Uniprot:O45244
Length = 1008
Score = 484 (175.4 bits), Expect = 2.3e-72, Sum P(3) = 2.3e-72
Identities = 124/355 (34%), Positives = 199/355 (56%)
Query: 529 EAWSAEQIDLGLVESTIEYICRHEGDGAILVFLTGWNDISKLLDQI-KVNKFLGDPNKFL 587
+A A+ +D +V + ++ G ILVFLTG +I + + + + +K LG K L
Sbjct: 550 QAPEADYVDAAIV-TIMQIHLTQPLPGDILVFLTGQEEIETVQEALMERSKALGSKIKEL 608
Query: 588 V-LPLHGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDA 646
+ LP++ ++P+ Q +IF+ P + RK+VLATNIAE+S+TID + YV+D G +K+ S+DA
Sbjct: 609 IPLPVYANLPSDLQAKIFEPTPKDARKVVLATNIAETSVTIDGINYVIDPGFSKQNSFDA 668
Query: 647 LNKLACLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQ-LPEILRTPLQE 705
+ + L ISKA+A+QR GRAGR PG C++LY + L Q +PEI RT L
Sbjct: 669 RSGVEHLHVVTISKAAANQRAGRAGRTGPGKCFRLYTAWAYKHELEEQPIPEIQRTNLGN 728
Query: 706 LCLHIKSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPV 765
+ L +KSL + + F L PP + A+E L +GAL+ LT LGR + P
Sbjct: 729 VVLMLKSLGIHDLVHF--DFLDPPPQETLVIALEQLYALGALNHRGELTKLGRRMAEFPC 786
Query: 766 DPNIGKMLLMGAIFQCLNPALTIAAALA-HRNPFVLPVNMQKEVDEAKRSFAGDSCSDHI 824
DP + KM++ ++C +TIAA L+ + F P D A++ F + DHI
Sbjct: 787 DPCMSKMIIASEKYECSEEIVTIAAMLSCNAAVFYRPKAQVIHADSARKGFWSPA-GDHI 845
Query: 825 ALLKAFDGYKDAKRNRRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKS 879
L+ ++ ++++ ++R +C EN++ T++ D+R Q + LL + KS
Sbjct: 846 TLMNVYNKWQESSFSQR---WCVENYVQHRTMKRARDVRDQLVGLLERVEIETKS 897
Score = 331 (121.6 bits), Expect = 2.3e-72, Sum P(3) = 2.3e-72
Identities = 76/209 (36%), Positives = 111/209 (53%)
Query: 263 EKLKSSDSGKAMLSF---REKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFIL 319
E++ +++ K +S R+ LP + + F++AV E+QVL++ GETG GKTTQLPQ++
Sbjct: 343 EEVVETEAEKKKMSIEETRKSLPVYAFRDAFIEAVKEHQVLIIEGETGSGKTTQLPQYLY 402
Query: 320 EEELSSLRGADCNIICTQPXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLL 379
E G I CTQP E G LG VGY IR E S +T L
Sbjct: 403 EAGFCE--GGK-RIGCTQPRRVAAMSVAARVADEVGCKLGTQVGYSIRFEDCTSEKTVLK 459
Query: 380 FCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSAT 439
+ T G+LLR+ + +PDL+ S +++DE HER ++ D SAT
Sbjct: 460 YMTDGMLLREFLNEPDLASYSVMMIDEAHERTLHTDILFGLVKDIARFRKDLKLLISSAT 519
Query: 440 INADLFSKYFGNAPTVHIPGLTFPVTDLF 468
++A+ FS +F +AP IPG FPV D++
Sbjct: 520 LDAEKFSSFFDDAPIFRIPGRRFPV-DIY 547
Score = 47 (21.6 bits), Expect = 2.3e-72, Sum P(3) = 2.3e-72
Identities = 23/99 (23%), Positives = 40/99 (40%)
Query: 187 RHGSTEKEL--QMSIETERRVGNLLNSSQGNVP---VNDSGIESSEVARRPKLSVKVANT 241
+ G T EL Q R VG L + S + V SSE P + K +
Sbjct: 75 QRGPTTAELAEQELNRLNRAVGVLEDYSASSTKTKNVRKRKESSSEDDEAPIKASKPGKS 134
Query: 242 ISPPQSDSAKERLNVILKERQEKLKSSDSGKAMLSFREK 280
+ P +SD ++ + + + + D+ A ++ +EK
Sbjct: 135 VKPSKSDDSESDIEAMEAKLDADIAERDALAARINKKEK 173
Score = 37 (18.1 bits), Expect = 1.6e-24, Sum P(3) = 1.6e-24
Identities = 6/28 (21%), Positives = 16/28 (57%)
Query: 642 TSYDALNKLACLLPSWISKASAHQRRGR 669
TS + + +++ + W+ + + H +GR
Sbjct: 958 TSKEFMREMSEIESGWLLEVAPHYYKGR 985
>UNIPROTKB|O45244 [details] [associations]
symbol:mog-4 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-4" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001482 InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF00437 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0009792 GO:GO:0002119
GO:GO:0008380 GO:GO:0006810 GO:GO:0018996 GO:GO:0006397
GO:GO:0003676 GO:GO:0042127 GO:GO:0040035 GO:GO:0007281
GO:GO:0048589 GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0040022 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 EMBL:AF286900 EMBL:Z81462 EMBL:Z81457 PIR:T18832
RefSeq:NP_497027.1 UniGene:Cel.17139 ProteinModelPortal:O45244
SMR:O45244 DIP:DIP-24771N IntAct:O45244 MINT:MINT-1105817
STRING:O45244 PaxDb:O45244 EnsemblMetazoa:C04H5.6 GeneID:175117
KEGG:cel:CELE_C04H5.6 UCSC:C04H5.6 CTD:175117 WormBase:C04H5.6
GeneTree:ENSGT00700000104241 InParanoid:O45244 OMA:GTLHREF
NextBio:886834 ArrayExpress:O45244 Uniprot:O45244
Length = 1008
Score = 484 (175.4 bits), Expect = 2.3e-72, Sum P(3) = 2.3e-72
Identities = 124/355 (34%), Positives = 199/355 (56%)
Query: 529 EAWSAEQIDLGLVESTIEYICRHEGDGAILVFLTGWNDISKLLDQI-KVNKFLGDPNKFL 587
+A A+ +D +V + ++ G ILVFLTG +I + + + + +K LG K L
Sbjct: 550 QAPEADYVDAAIV-TIMQIHLTQPLPGDILVFLTGQEEIETVQEALMERSKALGSKIKEL 608
Query: 588 V-LPLHGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDA 646
+ LP++ ++P+ Q +IF+ P + RK+VLATNIAE+S+TID + YV+D G +K+ S+DA
Sbjct: 609 IPLPVYANLPSDLQAKIFEPTPKDARKVVLATNIAETSVTIDGINYVIDPGFSKQNSFDA 668
Query: 647 LNKLACLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQ-LPEILRTPLQE 705
+ + L ISKA+A+QR GRAGR PG C++LY + L Q +PEI RT L
Sbjct: 669 RSGVEHLHVVTISKAAANQRAGRAGRTGPGKCFRLYTAWAYKHELEEQPIPEIQRTNLGN 728
Query: 706 LCLHIKSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPV 765
+ L +KSL + + F L PP + A+E L +GAL+ LT LGR + P
Sbjct: 729 VVLMLKSLGIHDLVHF--DFLDPPPQETLVIALEQLYALGALNHRGELTKLGRRMAEFPC 786
Query: 766 DPNIGKMLLMGAIFQCLNPALTIAAALA-HRNPFVLPVNMQKEVDEAKRSFAGDSCSDHI 824
DP + KM++ ++C +TIAA L+ + F P D A++ F + DHI
Sbjct: 787 DPCMSKMIIASEKYECSEEIVTIAAMLSCNAAVFYRPKAQVIHADSARKGFWSPA-GDHI 845
Query: 825 ALLKAFDGYKDAKRNRRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKS 879
L+ ++ ++++ ++R +C EN++ T++ D+R Q + LL + KS
Sbjct: 846 TLMNVYNKWQESSFSQR---WCVENYVQHRTMKRARDVRDQLVGLLERVEIETKS 897
Score = 331 (121.6 bits), Expect = 2.3e-72, Sum P(3) = 2.3e-72
Identities = 76/209 (36%), Positives = 111/209 (53%)
Query: 263 EKLKSSDSGKAMLSF---REKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFIL 319
E++ +++ K +S R+ LP + + F++AV E+QVL++ GETG GKTTQLPQ++
Sbjct: 343 EEVVETEAEKKKMSIEETRKSLPVYAFRDAFIEAVKEHQVLIIEGETGSGKTTQLPQYLY 402
Query: 320 EEELSSLRGADCNIICTQPXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLL 379
E G I CTQP E G LG VGY IR E S +T L
Sbjct: 403 EAGFCE--GGK-RIGCTQPRRVAAMSVAARVADEVGCKLGTQVGYSIRFEDCTSEKTVLK 459
Query: 380 FCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSAT 439
+ T G+LLR+ + +PDL+ S +++DE HER ++ D SAT
Sbjct: 460 YMTDGMLLREFLNEPDLASYSVMMIDEAHERTLHTDILFGLVKDIARFRKDLKLLISSAT 519
Query: 440 INADLFSKYFGNAPTVHIPGLTFPVTDLF 468
++A+ FS +F +AP IPG FPV D++
Sbjct: 520 LDAEKFSSFFDDAPIFRIPGRRFPV-DIY 547
Score = 47 (21.6 bits), Expect = 2.3e-72, Sum P(3) = 2.3e-72
Identities = 23/99 (23%), Positives = 40/99 (40%)
Query: 187 RHGSTEKEL--QMSIETERRVGNLLNSSQGNVP---VNDSGIESSEVARRPKLSVKVANT 241
+ G T EL Q R VG L + S + V SSE P + K +
Sbjct: 75 QRGPTTAELAEQELNRLNRAVGVLEDYSASSTKTKNVRKRKESSSEDDEAPIKASKPGKS 134
Query: 242 ISPPQSDSAKERLNVILKERQEKLKSSDSGKAMLSFREK 280
+ P +SD ++ + + + + D+ A ++ +EK
Sbjct: 135 VKPSKSDDSESDIEAMEAKLDADIAERDALAARINKKEK 173
Score = 37 (18.1 bits), Expect = 1.6e-24, Sum P(3) = 1.6e-24
Identities = 6/28 (21%), Positives = 16/28 (57%)
Query: 642 TSYDALNKLACLLPSWISKASAHQRRGR 669
TS + + +++ + W+ + + H +GR
Sbjct: 958 TSKEFMREMSEIESGWLLEVAPHYYKGR 985
>UNIPROTKB|O60231 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 EMBL:BA000025 GO:GO:0008380 GO:GO:0006397
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AL845353 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12813 GO:GO:0003724
HOVERGEN:HBG039428 OMA:GTLHREF EMBL:AB001601 EMBL:AB011149
EMBL:BC008825 EMBL:BC009392 IPI:IPI00552073 RefSeq:NP_001157711.1
RefSeq:NP_003578.2 UniGene:Hs.485060 ProteinModelPortal:O60231
SMR:O60231 IntAct:O60231 MINT:MINT-5003862 STRING:O60231
PhosphoSite:O60231 PaxDb:O60231 PRIDE:O60231 DNASU:8449
Ensembl:ENST00000376442 Ensembl:ENST00000383577
Ensembl:ENST00000417308 Ensembl:ENST00000421095
Ensembl:ENST00000424672 Ensembl:ENST00000451456
Ensembl:ENST00000458094 GeneID:8449 KEGG:hsa:8449 UCSC:uc003nqz.3
CTD:8449 GeneCards:GC06M030620 HGNC:HGNC:2739 HPA:HPA051455
MIM:603405 neXtProt:NX_O60231 PharmGKB:PA27205 InParanoid:O60231
OrthoDB:EOG4VHK5Q PhylomeDB:O60231 GenomeRNAi:8449 NextBio:31614
ArrayExpress:O60231 Bgee:O60231 CleanEx:HS_DHX16
Genevestigator:O60231 GermOnline:ENSG00000204560 Uniprot:O60231
Length = 1041
Score = 475 (172.3 bits), Expect = 3.4e-72, Sum P(2) = 3.4e-72
Identities = 136/409 (33%), Positives = 212/409 (51%)
Query: 529 EAWSAEQIDLGLVESTIEYICRHEGDGAILVFLTGWNDISKLLDQIKVN-KFLGDP-NKF 586
+A A+ ++ +V ++ + GD ILVFLTG +I + ++ + LG +
Sbjct: 585 KAPEADYLEACVVSVLQIHVTQPPGD--ILVFLTGQEEIEAACEMLQDRCRRLGSKIREL 642
Query: 587 LVLPLHGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDA 646
LVLP++ ++P+ Q IF PP RK+V+ATNIAE+S+TI+ ++YV+D G K+ SY+
Sbjct: 643 LVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNP 702
Query: 647 LNKLACLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQ-LPEILRTPLQE 705
+ L + SKASA+QR GRAGRV G C++LY + L +PEI RT L
Sbjct: 703 RTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGN 762
Query: 706 LCLHIKSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPV 765
+ L +KSL + + F L PP + A+E L +GAL+ + LT GR + LPV
Sbjct: 763 VVLLLKSLGIHDLMHF--DFLDPPPYETLLLALEQLYALGALNHLGELTTSGRKMAELPV 820
Query: 766 DPNIGKMLLMGAIFQCLNPALTIAAALAHRNP-FVLPVNMQKEVDEAKRSFAGDSCSDHI 824
DP + KM+L + C LT+AA L+ N F P + D A+ +F DH+
Sbjct: 821 DPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNARVNFFLPG-GDHL 879
Query: 825 ALLKAFDGYKDAKRNRRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSA 884
LL + + ++ + + +C+ENF+ +++ D+R Q LL + V S
Sbjct: 880 VLLNVYTQWAESGYSSQ---WCYENFVQFRSMRRARDVREQLEGLLERVE-VGLSSCQGD 935
Query: 885 YNRYSHDLEMVCAILCAGLYPNVVQCKRKGKRAVFYTKEVGQVALHPSS 933
Y R V + AG + + + R G R V K+ V +HP+S
Sbjct: 936 YIR-------VRKAITAGYFYHTARLTRSGYRTV---KQQQTVFIHPNS 974
Score = 341 (125.1 bits), Expect = 3.4e-72, Sum P(2) = 3.4e-72
Identities = 75/197 (38%), Positives = 106/197 (53%)
Query: 272 KAMLSFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADC 331
+++ + R LP F + E L A+A +QVL++ GETG GKTTQ+PQ++ EE ++ +G
Sbjct: 390 ESIQAVRRSLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTN-KGM-- 446
Query: 332 NIICTQPXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLV 391
I CTQP E G LG VGY IR E S +T L + T G+LLR+ +
Sbjct: 447 KIACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFL 506
Query: 392 EDPDLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGN 451
+PDL+ S ++VDE HER ++ D SAT++ FS +F +
Sbjct: 507 SEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATMDTARFSTFFDD 566
Query: 452 APTVHIPGLTFPVTDLF 468
AP IPG FPV D+F
Sbjct: 567 APVFRIPGRRFPV-DIF 582
>UNIPROTKB|F1RU83 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9823 "Sus scrofa"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:GTLHREF EMBL:CU480634
Ensembl:ENSSSCT00000001498 Uniprot:F1RU83
Length = 1045
Score = 475 (172.3 bits), Expect = 3.5e-72, Sum P(2) = 3.5e-72
Identities = 136/409 (33%), Positives = 212/409 (51%)
Query: 529 EAWSAEQIDLGLVESTIEYICRHEGDGAILVFLTGWNDISKLLDQIKVN-KFLGDP-NKF 586
+A A+ ++ +V ++ + GD ILVFLTG +I + ++ + LG +
Sbjct: 589 KAPEADYLEACVVSVLQIHVTQPPGD--ILVFLTGQEEIEAACEMLQDRCRRLGSKIREL 646
Query: 587 LVLPLHGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDA 646
LVLP++ ++P+ Q IF PP RK+V+ATNIAE+S+TI+ ++YV+D G K+ SY+
Sbjct: 647 LVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNP 706
Query: 647 LNKLACLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQ-LPEILRTPLQE 705
+ L + SKASA+QR GRAGRV G C++LY + L +PEI RT L
Sbjct: 707 RTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGN 766
Query: 706 LCLHIKSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPV 765
+ L +KSL + + F L PP + A+E L +GAL+ + LT GR + LPV
Sbjct: 767 VVLLLKSLGIHDLMHF--DFLDPPPYETLLLALEQLYALGALNHLGELTTSGRKMAELPV 824
Query: 766 DPNIGKMLLMGAIFQCLNPALTIAAALAHRNP-FVLPVNMQKEVDEAKRSFAGDSCSDHI 824
DP + KM+L + C LT+AA L+ N F P + D A+ +F DH+
Sbjct: 825 DPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNARVNFFLPG-GDHL 883
Query: 825 ALLKAFDGYKDAKRNRRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSA 884
LL + + ++ + + +C+ENF+ +++ D+R Q LL + V S
Sbjct: 884 VLLNVYTQWAESGYSSQ---WCYENFVQFRSMRRARDVREQLEGLLERVE-VGLSSCQGD 939
Query: 885 YNRYSHDLEMVCAILCAGLYPNVVQCKRKGKRAVFYTKEVGQVALHPSS 933
Y R V + AG + + + R G R V K+ V +HP+S
Sbjct: 940 YIR-------VRKAITAGYFYHTARLTRSGYRTV---KQQQTVFIHPNS 978
Score = 341 (125.1 bits), Expect = 3.5e-72, Sum P(2) = 3.5e-72
Identities = 75/197 (38%), Positives = 105/197 (53%)
Query: 272 KAMLSFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADC 331
+++ + R LP F + E L AVA +Q+L++ GETG GKTTQ+PQ++ EE + +G
Sbjct: 394 ESIQAVRRSLPVFPFREELLAAVANHQILIIEGETGSGKTTQIPQYLFEEGYTQ-KGM-- 450
Query: 332 NIICTQPXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLV 391
I CTQP E G LG VGY IR E S +T L + T G+LLR+ +
Sbjct: 451 KIACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFL 510
Query: 392 EDPDLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGN 451
+PDL+ S ++VDE HER ++ D SAT++ FS +F +
Sbjct: 511 SEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATLDTARFSTFFDD 570
Query: 452 APTVHIPGLTFPVTDLF 468
AP IPG FPV D+F
Sbjct: 571 APVFRIPGRRFPV-DIF 586
>UNIPROTKB|Q767K6 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9823 "Sus scrofa"
[GO:0005634 "nucleus" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0008380
GO:GO:0006397 GO:GO:0003676 EMBL:AB113357 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AB113356 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 HOVERGEN:HBG039428 CTD:8449 OrthoDB:EOG4VHK5Q
RefSeq:NP_001116578.1 UniGene:Ssc.15273 ProteinModelPortal:Q767K6
GeneID:100144456 KEGG:ssc:100144456 Uniprot:Q767K6
Length = 1045
Score = 475 (172.3 bits), Expect = 3.5e-72, Sum P(2) = 3.5e-72
Identities = 136/409 (33%), Positives = 212/409 (51%)
Query: 529 EAWSAEQIDLGLVESTIEYICRHEGDGAILVFLTGWNDISKLLDQIKVN-KFLGDP-NKF 586
+A A+ ++ +V ++ + GD ILVFLTG +I + ++ + LG +
Sbjct: 589 KAPEADYLEACVVSVLQIHVTQPPGD--ILVFLTGQEEIEAACEMLQDRCRRLGSKIREL 646
Query: 587 LVLPLHGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDA 646
LVLP++ ++P+ Q IF PP RK+V+ATNIAE+S+TI+ ++YV+D G K+ SY+
Sbjct: 647 LVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNP 706
Query: 647 LNKLACLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQ-LPEILRTPLQE 705
+ L + SKASA+QR GRAGRV G C++LY + L +PEI RT L
Sbjct: 707 RTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGN 766
Query: 706 LCLHIKSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPV 765
+ L +KSL + + F L PP + A+E L +GAL+ + LT GR + LPV
Sbjct: 767 VVLLLKSLGIHDLMHF--DFLDPPPYETLLLALEQLYALGALNHLGELTTSGRKMAELPV 824
Query: 766 DPNIGKMLLMGAIFQCLNPALTIAAALAHRNP-FVLPVNMQKEVDEAKRSFAGDSCSDHI 824
DP + KM+L + C LT+AA L+ N F P + D A+ +F DH+
Sbjct: 825 DPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNARVNFFLPG-GDHL 883
Query: 825 ALLKAFDGYKDAKRNRRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSA 884
LL + + ++ + + +C+ENF+ +++ D+R Q LL + V S
Sbjct: 884 VLLNVYTQWAESGYSSQ---WCYENFVQFRSMRRARDVREQLEGLLERVE-VGLSSCQGD 939
Query: 885 YNRYSHDLEMVCAILCAGLYPNVVQCKRKGKRAVFYTKEVGQVALHPSS 933
Y R V + AG + + + R G R V K+ V +HP+S
Sbjct: 940 YIR-------VRKAITAGYFYHTARLTRSGYRTV---KQQQTVFIHPNS 978
Score = 341 (125.1 bits), Expect = 3.5e-72, Sum P(2) = 3.5e-72
Identities = 75/197 (38%), Positives = 105/197 (53%)
Query: 272 KAMLSFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADC 331
+++ + R LP F + E L AVA +Q+L++ GETG GKTTQ+PQ++ EE + +G
Sbjct: 394 ESIQAVRRSLPVFPFREELLAAVANHQILIIEGETGSGKTTQIPQYLFEEGYTQ-KGM-- 450
Query: 332 NIICTQPXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLV 391
I CTQP E G LG VGY IR E S +T L + T G+LLR+ +
Sbjct: 451 KIACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFL 510
Query: 392 EDPDLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGN 451
+PDL+ S ++VDE HER ++ D SAT++ FS +F +
Sbjct: 511 SEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATLDTARFSTFFDD 570
Query: 452 APTVHIPGLTFPVTDLF 468
AP IPG FPV D+F
Sbjct: 571 APVFRIPGRRFPV-DIF 586
>SGD|S000000815 [details] [associations]
symbol:PRP22 "DEAH-box RNA-dependent ATPase/ATP-dependent RNA
helicase" species:4932 "Saccharomyces cerevisiae" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IMP] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000350 "generation of catalytic spliceosome for second
transesterification step" evidence=IDA;IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000386 "second spliceosomal transesterification
activity" evidence=IMP;IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000390 "spliceosomal complex disassembly"
evidence=IMP] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0071021 "U2-type post-spliceosomal complex"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 SGD:S000000815 GO:GO:0005524 KO:K01897
GO:GO:0003723 EMBL:BK006939 EMBL:U18778 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 HOGENOM:HOG000175261 GO:GO:0071007 InterPro:IPR022967
SMART:SM00316 GO:GO:0000390 GeneTree:ENSGT00700000104241 KO:K12818
GO:GO:0000350 RefSeq:NP_010931.3 GeneID:856734 KEGG:sce:YER015W
OrthoDB:EOG45TGW9 EMBL:X58681 PIR:S13643 RefSeq:NP_010929.3
ProteinModelPortal:P24384 SMR:P24384 DIP:DIP-655N IntAct:P24384
MINT:MINT-648209 STRING:P24384 PaxDb:P24384 EnsemblFungi:YER013W
GeneID:856732 KEGG:sce:YER013W CYGD:YER013w OMA:QITQYLD
NextBio:982846 Genevestigator:P24384 GermOnline:YER013W
GO:GO:0071021 Uniprot:P24384
Length = 1145
Score = 494 (179.0 bits), Expect = 4.2e-72, Sum P(2) = 4.2e-72
Identities = 136/390 (34%), Positives = 206/390 (52%)
Query: 551 HEGDGAILVFLTGWNDISK----LLDQIKVNKFLGDP-NKFLVLPLHGSMPTINQREIFD 605
+EG G ILVFLTG +I L D++K LGD + L+LP++ ++P+ Q +IF+
Sbjct: 688 NEGPGDILVFLTGQEEIDSCCEILYDRVKT---LGDSIGELLILPVYSALPSEIQSKIFE 744
Query: 606 RPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASAHQ 665
P RK+V ATNIAE+SITID + YVVD G AK Y+A + L+ S IS+A A+Q
Sbjct: 745 PTPKGSRKVVFATNIAETSITIDGIYYVVDPGFAKINIYNARAGIEQLIVSPISQAQANQ 804
Query: 666 RRGRAGRVQPGVCYKLYPR-IIHDAMLPYQLPEILRTPLQELCLHIKSLQLGTVGSFLSK 724
R+GRAGR PG CY+LY ++ ML +PEI R L L +K++ + + F
Sbjct: 805 RKGRAGRTGPGKCYRLYTESAFYNEMLENTVPEIQRQNLSHTILMLKAMGINDLLKF--D 862
Query: 725 ALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGKMLLMGAIFQCLNP 784
+ PP + NA+ L + +LDD LT LG+ + P+DP + + LL QC +
Sbjct: 863 FMDPPPKNLMLNALTELYHLQSLDDEGKLTNLGKEMSLFPMDPTLSRSLLSSVDNQCSDE 922
Query: 785 ALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAKRNRRERD 844
+TI + L+ +N F P + Q E D K F DH+ LL + ++ A N E+
Sbjct: 923 IVTIISMLSVQNVFYRPKDRQLEADSKKAKFH-HPYGDHLTLLNVYTRWQQA--NYSEQ- 978
Query: 845 FCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYSHDLEMVCAILCAGLY 904
+C NFL L+ D++SQ + IG K S ++ D +++ +G +
Sbjct: 979 YCKTNFLHFRHLKRARDVKSQISMIFKKIGL----KLISCHS----DPDLIRKTFVSGFF 1030
Query: 905 PNVVQCKRKGKRAVFYTKEVG-QVALHPSS 933
N ++ + + T G +V +HPSS
Sbjct: 1031 MNAA---KRDSQVGYKTINGGTEVGIHPSS 1057
Score = 322 (118.4 bits), Expect = 4.2e-72, Sum P(2) = 4.2e-72
Identities = 73/191 (38%), Positives = 103/191 (53%)
Query: 278 REKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQ 337
R+ LP + M++E ++AV +NQ LV+ GETG GKTTQ+ Q++ EE S+ G I CTQ
Sbjct: 480 RQTLPVYAMRSELIQAVRDNQFLVIVGETGSGKTTQITQYLDEEGFSNY-GM---IGCTQ 535
Query: 338 PXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVEDPDLS 397
P E G +G VGY IR E TR+ + T G+L R+ + DP++S
Sbjct: 536 PRRVAAVSVAKRVAEEVGCKVGHDVGYTIRFEDVTGPDTRIKYMTDGMLQREALLDPEMS 595
Query: 398 CVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGNAPTVHI 457
S +++DE HER + D SAT+N+ FS+YF N P ++I
Sbjct: 596 KYSVIMLDEAHERTVATDVLFALLKKAAIKRPELKVIVTSATLNSAKFSEYFLNCPIINI 655
Query: 458 PGLTFPVTDLF 468
PG TFPV L+
Sbjct: 656 PGKTFPVEVLY 666
Score = 37 (18.1 bits), Expect = 3.0e-23, Sum P(2) = 3.0e-23
Identities = 5/23 (21%), Positives = 14/23 (60%)
Query: 642 TSYDALNKLACLLPSWISKASAH 664
TS + ++++ + P W+ + + H
Sbjct: 1075 TSREYMSQVTSIEPQWLLEVAPH 1097
>UNIPROTKB|E1BF68 [details] [associations]
symbol:DHX16 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12813 GeneTree:ENSGT00700000104241 OMA:GTLHREF
CTD:8449 EMBL:DAAA02055402 IPI:IPI00691986 RefSeq:NP_001193139.1
UniGene:Bt.22201 PRIDE:E1BF68 Ensembl:ENSBTAT00000009148
GeneID:506405 KEGG:bta:506405 NextBio:20867594 Uniprot:E1BF68
Length = 1045
Score = 475 (172.3 bits), Expect = 4.5e-72, Sum P(2) = 4.5e-72
Identities = 136/409 (33%), Positives = 212/409 (51%)
Query: 529 EAWSAEQIDLGLVESTIEYICRHEGDGAILVFLTGWNDISKLLDQIKVN-KFLGDP-NKF 586
+A A+ ++ +V ++ + GD ILVFLTG +I + ++ + LG +
Sbjct: 589 KAPEADYLEACVVSVLQIHVTQPPGD--ILVFLTGQEEIEAACEMLQDRCRRLGSKIREL 646
Query: 587 LVLPLHGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDA 646
LVLP++ ++P+ Q IF PP RK+V+ATNIAE+S+TI+ ++YV+D G K+ SY+
Sbjct: 647 LVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNP 706
Query: 647 LNKLACLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQ-LPEILRTPLQE 705
+ L + SKASA+QR GRAGRV G C++LY + L +PEI RT L
Sbjct: 707 RTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGN 766
Query: 706 LCLHIKSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPV 765
+ L +KSL + + F L PP + A+E L +GAL+ + LT GR + LPV
Sbjct: 767 VVLLLKSLGIHDLMHF--DFLDPPPYETLLLALEQLYALGALNHLGELTTSGRKMAELPV 824
Query: 766 DPNIGKMLLMGAIFQCLNPALTIAAALAHRNP-FVLPVNMQKEVDEAKRSFAGDSCSDHI 824
DP + KM+L + C LT+AA L+ N F P + D A+ +F DH+
Sbjct: 825 DPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNARVNFFLPG-GDHL 883
Query: 825 ALLKAFDGYKDAKRNRRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSA 884
LL + + ++ + + +C+ENF+ +++ D+R Q LL + V S
Sbjct: 884 VLLNVYTQWAESGYSSQ---WCYENFVQFRSMRRARDVREQLEGLLERVE-VGLSSCQGD 939
Query: 885 YNRYSHDLEMVCAILCAGLYPNVVQCKRKGKRAVFYTKEVGQVALHPSS 933
Y R V + AG + + + R G R V K+ V +HP+S
Sbjct: 940 YIR-------VRKAITAGYFYHTARLTRSGYRTV---KQQQTVFIHPNS 978
Score = 340 (124.7 bits), Expect = 4.5e-72, Sum P(2) = 4.5e-72
Identities = 75/197 (38%), Positives = 105/197 (53%)
Query: 272 KAMLSFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADC 331
+++ + R LP F + E L A+A +QVL++ GETG GKTTQ+PQ++ EE + +G
Sbjct: 394 ESIQAVRRSLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTK-KGM-- 450
Query: 332 NIICTQPXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLV 391
I CTQP E G LG VGY IR E S +T L + T G+LLR+ +
Sbjct: 451 KIACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFL 510
Query: 392 EDPDLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGN 451
+PDL+ S ++VDE HER ++ D SAT++ FS +F +
Sbjct: 511 SEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATLDTARFSTFFDD 570
Query: 452 APTVHIPGLTFPVTDLF 468
AP IPG FPV D+F
Sbjct: 571 APIFRIPGRRFPV-DIF 586
>FB|FBgn0086444 [details] [associations]
symbol:l(2)37Cb "lethal (2) 37Cb" species:7227 "Drosophila
melanogaster" [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;ISS] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014134 GO:GO:0022008 GO:GO:0003676 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 KO:K12813 GO:GO:0016779 GeneTree:ENSGT00700000104241
OMA:GTLHREF EMBL:AY061330 RefSeq:NP_609946.1 UniGene:Dm.468
SMR:Q9VIZ3 IntAct:Q9VIZ3 MINT:MINT-318410 STRING:Q9VIZ3
EnsemblMetazoa:FBtr0081163 GeneID:35192 KEGG:dme:Dmel_CG10689
UCSC:CG10689-RA FlyBase:FBgn0086444 InParanoid:Q9VIZ3
OrthoDB:EOG459ZWG GenomeRNAi:35192 NextBio:792305 Uniprot:Q9VIZ3
Length = 894
Score = 484 (175.4 bits), Expect = 6.2e-72, Sum P(2) = 6.2e-72
Identities = 128/383 (33%), Positives = 206/383 (53%)
Query: 555 GAILVFLTGWNDISKLLDQIKVN-KFLGDP-NKFLVLPLHGSMPTINQREIFDRPPPNKR 612
G ILVFLTG ++I + + K LG + +V+P++ ++P+ Q +IF+ PPN R
Sbjct: 462 GDILVFLTGQDEIETCQEVLHDRVKRLGSKIRELIVIPVYANLPSDMQAKIFEPTPPNAR 521
Query: 613 KIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGR 672
K++LATNIAE+S+TID+++YV+D G AK+ ++++ + L+ ISKASA+QR GRAGR
Sbjct: 522 KVILATNIAETSLTIDNIIYVIDPGFAKQNNFNSRTGMESLMVVPISKASANQRAGRAGR 581
Query: 673 VQPGVCYKLYPRIIHDAMLPYQ-LPEILRTPLQELCLHIKSLQLGTVGSFLSKALQPPDP 731
PG C++LY + L +PEI R L L +K+L + + F L PP
Sbjct: 582 TAPGKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLMLKALGINDLIHF--DFLDPPPH 639
Query: 732 LAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGKMLLMGAIFQCLNPALTIAAA 791
+ A+E L +GAL+ LT LGR + PVDP +GKMLL ++C +TIAA
Sbjct: 640 ETLVLALEQLYALGALNHHGELTKLGRRMAEFPVDPMMGKMLLASEKYKCSEEMVTIAAM 699
Query: 792 LAHRNP-FVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAKRNRRERDFCWENF 850
L+ + F P + D A+++F DH++LL+ ++ + + + + +C+ENF
Sbjct: 700 LSVNSAIFYRPKDKIIHADTARKNF-NHMHGDHLSLLQVYNQWAETDYSTQ---WCYENF 755
Query: 851 LSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYSHDLEMVCAILCAGLYPNVVQC 910
+ +++ D+R Q + L+ + S P N V AG + +V +
Sbjct: 756 IQYRSMKRARDVREQLVGLMQRVEIDMVSCLPETVN--------VRKAATAGYFYHVARL 807
Query: 911 KRKGKRAVFYTKEVGQVALHPSS 933
+ G K V +HP+S
Sbjct: 808 SKGGHYKTI--KHNQTVMIHPNS 828
Score = 325 (119.5 bits), Expect = 6.2e-72, Sum P(2) = 6.2e-72
Identities = 75/210 (35%), Positives = 108/210 (51%)
Query: 261 RQEKLKSSDSGKAMLS-FREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFIL 319
RQ +L + + L R LP + K + + AV E+QVL++ GETG GKTTQ+PQ+++
Sbjct: 231 RQPELTEKERKRLTLDETRRSLPVYPFKEDLIAAVKEHQVLIIEGETGSGKTTQVPQYLV 290
Query: 320 EEELSSLRGADCNII-CTQPXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRL 378
E + D +I CTQP E G LG VGY IR E S +T L
Sbjct: 291 EAGFTK----DKKMIGCTQPRRVAAMSVAARVAEEMGVKLGNEVGYSIRFEDCTSDRTIL 346
Query: 379 LFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSA 438
+ T G L R+ + +PDL+ S +++DE HER ++ D SA
Sbjct: 347 KYMTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIARFRPELKLLISSA 406
Query: 439 TINADLFSKYFGNAPTVHIPGLTFPVTDLF 468
T++A+ FS +F +AP IPG +PV D+F
Sbjct: 407 TLDAEKFSAFFDDAPIFRIPGRRYPV-DIF 435
>POMBASE|SPBC1711.17 [details] [associations]
symbol:prp16 "ATP-dependent RNA helicase Prp16
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000350
"generation of catalytic spliceosome for second transesterification
step" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005681 "spliceosomal
complex" evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 PomBase:SPBC1711.17 GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0005681 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
KO:K12815 GO:GO:0000350 OMA:PSRSTWE PIR:T39724 RefSeq:NP_595890.2
ProteinModelPortal:Q9P774 IntAct:Q9P774 EnsemblFungi:SPBC1711.17.1
GeneID:2540006 KEGG:spo:SPBC1711.17 OrthoDB:EOG4GQTD2
NextBio:20801149 Uniprot:Q9P774
Length = 1173
Score = 472 (171.2 bits), Expect = 6.3e-72, Sum P(2) = 6.3e-72
Identities = 117/337 (34%), Positives = 187/337 (55%)
Query: 541 VESTIEYICR-H--EGDGAILVFLTGWNDISKLLDQI--KVNKFLGDPNKFLVLPLHGSM 595
VE+ + + + H + G ILVF+TG DI + I ++N+ L D + +LP++ M
Sbjct: 684 VEAAVRQVLQIHLSQPAGDILVFMTGQEDIEATCEIIADRLNQ-LHDAPRLSILPIYSQM 742
Query: 596 PTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLP 655
P Q +IFD P RK+V+ATNIAE+S+T+ + YVVD G K Y++ + L
Sbjct: 743 PADLQAKIFDSAEPGVRKVVVATNIAETSLTVHGISYVVDTGYCKLKMYNSKLGIDTLQV 802
Query: 656 SWISKASAHQRRGRAGRVQPGVCYKLYPRIIH-DAMLPYQLPEILRTPLQELCLHIKSLQ 714
+ IS+A+A+QR GRAGR PG+ Y+LY + + M LPEI RT L L +KSL
Sbjct: 803 TPISQANANQRAGRAGRTGPGIAYRLYTEMAYIREMFETTLPEIQRTNLSNTVLILKSLG 862
Query: 715 LGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGKMLL 774
+ + F +PP+ + + EL T+GALD+ LT LG+ + P+DP++ K+++
Sbjct: 863 VEEISDF-DFMDRPPNDTLMASLYELW-TLGALDNFGKLTTLGKKMSLFPMDPSLSKLII 920
Query: 775 MGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYK 834
+ ++C +TI + L+ + F P +E D A+ F SDH+ LL Y+
Sbjct: 921 IAEDYKCTEEIITIVSMLSVPSVFYRPKERAEESDAAREKFNVPE-SDHLMLLNI---YQ 976
Query: 835 DAKRNRRERDFCWENFLSPITLQMMEDMRSQFLDLLS 871
+RN +C ++FL TL+ D+R Q ++++S
Sbjct: 977 HWQRNGYSNSWCSKHFLHSKTLKRARDIRQQLVEIMS 1013
Score = 344 (126.2 bits), Expect = 6.3e-72, Sum P(2) = 6.3e-72
Identities = 113/384 (29%), Positives = 170/384 (44%)
Query: 98 DPVWRAERLRQQAAEMEV-----FDQNEWWGKLEQMKRGEEQEMIIKRKFSRADQQTLAD 152
D AE + +Q + + F +N W K + G + ++ +S +++ +
Sbjct: 315 DRAHEAEFIEKQKKHLSIEASDRFKENSMWEKNRMITSGVSKAPGLESDYSLMEERRVHL 374
Query: 153 MAHQLGLHF---HAYNKGKALAVSKVPLPMYRPDLDERHGST----EKELQMSIETERRV 205
+ +L HF ++ K ++ V P ++ R GS +E + +
Sbjct: 375 LVDELRPHFLDGAEFSSKKVGDITSVRDPQSDLAINARLGSRLVRERREFRERQKAASAA 434
Query: 206 GNLLNSSQGNVP-VNDSGIESSEVARRPKLSVKVANTISPPQSDSAKERLNVILKERQEK 264
+L +S GNV + DS E ++ P VKVA E+ N K+ E
Sbjct: 435 TSLAGTSLGNVMGLKDSNDEDAKAGTTP---VKVAGR---------SEQSN---KKDTEF 479
Query: 265 LKSSDSGKAMLSFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELS 324
++ K+ RE LPAF ++ + L + +NQVL+V GETG GKTTQL QF+ E+
Sbjct: 480 ART----KSYREQREFLPAFAVREQLLSVIRDNQVLIVVGETGSGKTTQLAQFLYEDGYH 535
Query: 325 SLRGADCNIICTQPXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLLFCTTG 384
G I CTQP E G LG TVGY IR E T + + T G
Sbjct: 536 R-NGM---IGCTQPRRVAAMSVAKRVSEEMGVRLGSTVGYSIRFEDVTGPDTVIKYMTDG 591
Query: 385 VLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINADL 444
VLLR+ + +L S +++DE HER +N D SAT+N+
Sbjct: 592 VLLRESLMQNNLEKYSVIIMDEAHERSLNTDILMGLLKKVLSRRRDIKLLVTSATMNSQK 651
Query: 445 FSKYFGNAPTVHIPGLTFPVTDLF 468
FS +FG AP IPG T+PV +F
Sbjct: 652 FSDFFGGAPQFTIPGRTYPVDIMF 675
Score = 219 (82.2 bits), Expect = 1.1e-44, Sum P(2) = 1.1e-44
Identities = 67/235 (28%), Positives = 114/235 (48%)
Query: 741 LKTIGALDDMENLTPLGRHLCTLPVDPNIGKMLLMGAIFQCLNPALTIAAALAHRNPFVL 800
L T+GALD+ LT LG+ + P+DP++ K++++ ++C +TI + L+ + F
Sbjct: 887 LWTLGALDNFGKLTTLGKKMSLFPMDPSLSKLIIIAEDYKCTEEIITIVSMLSVPSVFYR 946
Query: 801 PVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAKRNRRERDFCWENFLSPITLQMME 860
P +E D A+ F SDH+ LL Y+ +RN +C ++FL TL+
Sbjct: 947 PKERAEESDAAREKFNVPE-SDHLMLLNI---YQHWQRNGYSNSWCSKHFLHSKTLKRAR 1002
Query: 861 DMRSQFLDLLSDIGFVDKSKGPSAYNRYSHDLEMVCAILCAGLYPNVVQCKRKGKRAVFY 920
D+R Q ++++S K K + S D ++V +LC+ Y + C KG +
Sbjct: 1003 DIRQQLVEIMS------KQK--ISLESVS-DWDIVRRVLCSA-YFHQAACA-KGIGEYVH 1051
Query: 921 TKEVGQVALHPSSVNANQNNFPLPYMVYSEMVKTNNINVYDSTNISEYALLLFGG 975
+ LH +S P Y++Y E+V T+ + T++ Y L FGG
Sbjct: 1052 LRSGMPCHLHVTSSLYGLGYLP-DYVIYHELVLTSKEYMNIVTSVDPYWLAEFGG 1105
Score = 38 (18.4 bits), Expect = 1.0e-39, Sum P(2) = 1.0e-39
Identities = 16/74 (21%), Positives = 33/74 (44%)
Query: 194 ELQMSIETERRVGNLLNSSQGNVPVNDSGIESSEVARRPKLSVKVANTISPPQSDSAKER 253
E + I ++ GN + G V N SG++ E ++ +L + V + + S E
Sbjct: 77 ETNLGISKDKLPGNDGSQVAGLVLSNRSGLKGRE-PKKSQLGLDVL-AVQKKKEKSQVEG 134
Query: 254 LNVILKERQEKLKS 267
+ + + + L+S
Sbjct: 135 RSELSQVENDSLES 148
>UNIPROTKB|Q9H5Z1 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CH471077 GO:GO:0003676 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HOVERGEN:HBG039428 KO:K13117 OMA:NIFVVPP
EMBL:AK026412 EMBL:AK025541 EMBL:AL023803 EMBL:BC132669
IPI:IPI00030288 RefSeq:NP_068750.2 UniGene:Hs.444520
ProteinModelPortal:Q9H5Z1 SMR:Q9H5Z1 IntAct:Q9H5Z1
PhosphoSite:Q9H5Z1 DMDM:20137971 PRIDE:Q9H5Z1 DNASU:60625
Ensembl:ENST00000252011 GeneID:60625 KEGG:hsa:60625 UCSC:uc002xjh.3
CTD:60625 GeneCards:GC20P037590 HGNC:HGNC:15861 neXtProt:NX_Q9H5Z1
PharmGKB:PA27222 InParanoid:Q9H5Z1 PhylomeDB:Q9H5Z1
GenomeRNAi:60625 NextBio:65461 ArrayExpress:Q9H5Z1 Bgee:Q9H5Z1
CleanEx:HS_DHX35 Genevestigator:Q9H5Z1 GermOnline:ENSG00000101452
Uniprot:Q9H5Z1
Length = 703
Score = 515 (186.3 bits), Expect = 1.4e-71, Sum P(2) = 1.4e-71
Identities = 131/402 (32%), Positives = 212/402 (52%)
Query: 541 VESTIEYICR-H--EGDGAILVFLTGWNDI----SKLLDQIKVNKFLGDPNKFLVLPLHG 593
++ST+E + + H EGDG +L FLTG ++ S L++Q + G VLP++
Sbjct: 258 IKSTVETVVKIHQTEGDGDVLAFLTGQEEVETVVSMLIEQARALARTGMKRHLRVLPMYA 317
Query: 594 SMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACL 653
+P+ Q ++F+R + RK+++ATN+AE+SITI +VYV+DCG K +Y+ + CL
Sbjct: 318 GLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIECL 377
Query: 654 LPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQLPEILRTPLQELCLHIKSL 713
+ +S+ASA+QR GR GR + G CY+LY D + +PE+ R+ L + L +K+L
Sbjct: 378 VVVPVSQASANQRAGRGGRSRSGKCYRLYTEEAFDKLPQSTVPEMQRSNLAPVILQLKAL 437
Query: 714 QLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLT-PLGRHLCTLPVDPNIGKM 772
+ V F + PP ++ A+ELL +G LD LT PLG + P++P KM
Sbjct: 438 GIDNVLRF--HFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEFPLNPMFAKM 495
Query: 773 LLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDG 832
LL F C L+IAA + +N FV+P N + R FA + DH+ +L ++
Sbjct: 496 LLESGNFGCSQEILSIAAMMQIQNIFVVPPNQKSHAIRVHRKFAVEE-GDHLTMLNIYEA 554
Query: 833 YKDAKRNRRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYSHDL 892
+ K N+ + +C E+FL+ L +R Q LL K + P + DL
Sbjct: 555 F--IKHNKDSK-WCQEHFLNYKGLVRAATVREQLKKLLV------KFQVPRKSSEGDPDL 605
Query: 893 EMVCAILCAGLYPNVVQCKRKGKRAVFYTKEVGQVALHPSSV 934
+ C + +G + N + G A ++ ++ +HP+SV
Sbjct: 606 VLRCIV--SGFFANAARFHSTG--AYRTIRDDHELHIHPASV 643
Score = 256 (95.2 bits), Expect = 1.4e-71, Sum P(2) = 1.4e-71
Identities = 67/202 (33%), Positives = 98/202 (48%)
Query: 278 REKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQ 337
R+KLP FK++ L + Q +V+ GETGCGK+TQ+PQ++ E ++ G + TQ
Sbjct: 51 RQKLPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWTA-EGRVVGV--TQ 107
Query: 338 PXXXXXXXXXXXXXXERGENLGETVGYQIRLES-KRSAQTRLLFCTTGVLLRQLVEDPDL 396
P ERG LG VGY IR + TR+ F T G+L+R+++ DP L
Sbjct: 108 PRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLATRIKFLTDGMLVREMMVDPLL 167
Query: 397 SCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGNAPT-- 454
+ S +++DE HER + D SAT++AD F +F T
Sbjct: 168 TKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDADKFRDFFNQNETSD 227
Query: 455 --------VHIPGLTFPVTDLF 468
+ + G TFPV D+F
Sbjct: 228 PARDTCVILTVEGRTFPV-DIF 248
Score = 232 (86.7 bits), Expect = 3.2e-37, Sum P(2) = 3.2e-37
Identities = 88/308 (28%), Positives = 142/308 (46%)
Query: 669 RAGRVQPGVCYKLYPRIIHDAMLPYQLPEILRTPLQELCLHIKSLQLGTVG--SFLS-KA 725
RAGR K Y +A +LP+ +Q L LQL +G + L
Sbjct: 390 RAGRGGRSRSGKCYRLYTEEAF--DKLPQSTVPEMQRSNLAPVILQLKALGIDNVLRFHF 447
Query: 726 LQPPDPLAVQNAIELLKTIGALDDMENLT-PLGRHLCTLPVDPNIGKMLLMGAIFQCLNP 784
+ PP ++ A+ELL +G LD LT PLG + P++P KMLL F C
Sbjct: 448 MSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQE 507
Query: 785 ALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAKRNRRERD 844
L+IAA + +N FV+P N + R FA + DH+ +L ++ + K N+ +
Sbjct: 508 ILSIAAMMQIQNIFVVPPNQKSHAIRVHRKFAVEE-GDHLTMLNIYEAF--IKHNKDSK- 563
Query: 845 FCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYSHDLEMVCAILCAGLY 904
+C E+FL+ L +R Q LL K + P + DL + C + +G +
Sbjct: 564 WCQEHFLNYKGLVRAATVREQLKKLLV------KFQVPRKSSEGDPDLVLRCIV--SGFF 615
Query: 905 PNVVQCKRKGKRAVFYTKEVGQVALHPSSVNANQNNFPLPYMVYSEMVKTNNINVYDSTN 964
N + G A ++ ++ +HP+SV + P +++Y+E+++T+ + D T
Sbjct: 616 ANAARFHSTG--AYRTIRDDHELHIHPASVLYAEK--PPRWVIYNEVIQTSKYYMRDVTA 671
Query: 965 ISEYALLL 972
I E A LL
Sbjct: 672 I-ESAWLL 678
>RGD|1302963 [details] [associations]
symbol:Dhx16 "DEAH (Asp-Glu-Ala-His) box polypeptide 16"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1302963 GO:GO:0005524 GO:GO:0003676 EMBL:BX883048
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12813
HOVERGEN:HBG039428 CTD:8449 EMBL:CH474118 IPI:IPI00421973
RefSeq:NP_997661.1 UniGene:Rn.6832 GeneID:294232 KEGG:rno:294232
UCSC:RGD:1302963 NextBio:637799 Genevestigator:Q6MG13
Uniprot:Q6MG13
Length = 1044
Score = 469 (170.2 bits), Expect = 1.6e-71, Sum P(2) = 1.6e-71
Identities = 134/409 (32%), Positives = 212/409 (51%)
Query: 529 EAWSAEQIDLGLVESTIEYICRHEGDGAILVFLTGWNDISKLLDQIKVN-KFLGDP-NKF 586
+A A+ ++ +V ++ + GD ILVFLTG +I + ++ + LG +
Sbjct: 588 KAPEADYLEACVVSVLQIHVTQPPGD--ILVFLTGQEEIEAACEMLQDRCRRLGSKIREL 645
Query: 587 LVLPLHGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDA 646
LVLP++ ++P+ Q IF PP RK+V+ATNIAE+S+TI+ ++YV+D G K+ SY+
Sbjct: 646 LVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNP 705
Query: 647 LNKLACLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQ-LPEILRTPLQE 705
+ L + SKASA+QR GRAGRV G C++LY + L +PEI RT L
Sbjct: 706 RTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGN 765
Query: 706 LCLHIKSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPV 765
+ L +KSL + + F L PP + A+E L +GAL+ + LT GR + LPV
Sbjct: 766 VVLLLKSLGIHDLMHF--DFLDPPPYETLLLALEQLYALGALNHLGELTTSGRKMAELPV 823
Query: 766 DPNIGKMLLMGAIFQCLNPALTIAAALAHRNP-FVLPVNMQKEVDEAKRSFAGDSCSDHI 824
DP + KM+L + C LT+AA L+ N F P + D A+ +F DH+
Sbjct: 824 DPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNARVNFFLPG-GDHL 882
Query: 825 ALLKAFDGYKDAKRNRRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSA 884
LL + + ++ + + +C+ENF+ +++ D+R Q LL + V +
Sbjct: 883 VLLNVYTQWAESGYSSQ---WCYENFVQFRSMRRARDVREQLEGLLERVE-VGLTSCQGD 938
Query: 885 YNRYSHDLEMVCAILCAGLYPNVVQCKRKGKRAVFYTKEVGQVALHPSS 933
Y R V + +G + + + R G R V K+ V +HP+S
Sbjct: 939 YVR-------VRKAITSGYFYHTARLTRSGYRTV---KQQQTVFIHPNS 977
Score = 341 (125.1 bits), Expect = 1.6e-71, Sum P(2) = 1.6e-71
Identities = 75/197 (38%), Positives = 105/197 (53%)
Query: 272 KAMLSFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADC 331
+++ + R LP F + E L A+A +QVL++ GETG GKTTQ+PQ++ EE + +G
Sbjct: 393 ESIQAVRRSLPVFPFREELLTAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTK-KGM-- 449
Query: 332 NIICTQPXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLV 391
I CTQP E G LG VGY IR E S +T L + T G+LLR+ +
Sbjct: 450 KIACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFL 509
Query: 392 EDPDLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGN 451
+PDL+ S ++VDE HER ++ D SAT++ FS +F +
Sbjct: 510 SEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATLDTARFSAFFDD 569
Query: 452 APTVHIPGLTFPVTDLF 468
AP IPG FPV D+F
Sbjct: 570 APVFRIPGRRFPV-DIF 585
>ZFIN|ZDB-GENE-040426-1144 [details] [associations]
symbol:dhx38 "DEAH (Asp-Glu-Ala-His) box
polypeptide 38" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-040426-1144 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
HOVERGEN:HBG039428 KO:K12815 CTD:9785 OrthoDB:EOG4Z62MS
EMBL:BC063744 IPI:IPI00493120 RefSeq:NP_957170.1 UniGene:Dr.38854
ProteinModelPortal:Q6P404 STRING:Q6P404 PRIDE:Q6P404 GeneID:393850
KEGG:dre:393850 NextBio:20814835 ArrayExpress:Q6P404 Bgee:Q6P404
Uniprot:Q6P404
Length = 1258
Score = 454 (164.9 bits), Expect = 5.8e-71, Sum P(2) = 5.8e-71
Identities = 128/404 (31%), Positives = 200/404 (49%)
Query: 555 GAILVFLTGWNDISKLLDQIKVNKF--LGDPNKFLVLPLHGSMPTINQREIFDRPPPNKR 612
G IL+F+ G DI DQI V + L + VLP++ +P+ Q +IF + P R
Sbjct: 772 GDILIFMPGQEDIEVTSDQI-VERLADLENAPALAVLPIYSQLPSDLQAKIFQKAPDGVR 830
Query: 613 KIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGR 672
K ++ATNIAE+S+T+D +++VVD G K ++ + L IS+A+A+QR GRAGR
Sbjct: 831 KCIVATNIAETSLTVDGIMFVVDSGYCKLKVFNPRIGMDALQVYPISQANANQRAGRAGR 890
Query: 673 VQPGVCYKLYPR-IIHDAMLPYQLPEILRTPLQELCLHIKSLQLGTVGSFLSKALQPPDP 731
PG CY+LY + + ML +PEI RT L + L +KSL G L + PP
Sbjct: 891 TGPGQCYRLYTQSAFKNEMLTTTIPEIQRTNLANVVLLLKSL--GVQDLLLFHFMDPPPE 948
Query: 732 LAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGKMLLMGAIFQCLNPALTIAAA 791
+ N++ L +GALD+ LTP GR + P+DP + KML++ C L I +
Sbjct: 949 DNMLNSMYQLWILGALDNTGALTPTGRLMVEFPLDPALSKMLIVSCDMSCSADILIIVSM 1008
Query: 792 LAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAKRNRRERDFCWENFL 851
L+ + F P ++E D+ + F+ SDH+ L Y K N +C ++F+
Sbjct: 1009 LSVPSIFYRPKGREEESDQVREKFSVPE-SDHLTYLNV---YLQWKNNNYSSIWCNDHFI 1064
Query: 852 SPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYSHDLEMVCAILCAGLYPNVVQCK 911
++ + ++R+Q L DI K S D +++ +CA + + K
Sbjct: 1065 HTKAMRKVREVRAQ----LKDIMVQQKMNLISC----GSDWDVIRKCICAAYFHQAAKLK 1116
Query: 912 RKGKRAVFYTKEVGQVA-LHPSSVNANQNNFPLPYMVYSEMVKT 954
G+ + G LHP+S P Y++Y E+V T
Sbjct: 1117 GIGE---YVNVRTGMPCHLHPTSALFGMGYTP-DYIIYHELVMT 1156
Score = 355 (130.0 bits), Expect = 5.8e-71, Sum P(2) = 5.8e-71
Identities = 78/219 (35%), Positives = 114/219 (52%)
Query: 250 AKERLNVILKERQEKLKSSDSGKAMLSFREKLPAFKMKAEFLKAVAENQVLVVSGETGCG 309
A+++ +KE+ E K +L R+ LP F ++ + L + +N +++V GETG G
Sbjct: 532 AEQKFADHMKEKSEASSDFAKKKTLLEQRQYLPIFAVRQQLLNIIRDNNIVIVVGETGSG 591
Query: 310 KTTQLPQFILEEELSSLRGADCNIICTQPXXXXXXXXXXXXXXERGENLGETVGYQIRLE 369
KTTQL Q++ E+ +S G + CTQP E NLGE VGY IR E
Sbjct: 592 KTTQLTQYLHEDGYTSY-GM---VGCTQPRRVAAMSVAKRVSEEMNSNLGEEVGYAIRFE 647
Query: 370 SKRSAQTRLLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXX 429
S +T + + T G+LLR+ + + DL S +++DE HER +N D
Sbjct: 648 DCTSEKTMIKYMTDGILLRESLRESDLDHYSAVIMDEAHERSLNTDVLFGLLREVVSRRS 707
Query: 430 XXXXXXMSATINADLFSKYFGNAPTVHIPGLTFPVTDLF 468
SAT+++D F+ +FGN P HIPG TFPV LF
Sbjct: 708 DLKLIVTSATMDSDKFASFFGNVPIFHIPGRTFPVDILF 746
>UNIPROTKB|G4MKC3 [details] [associations]
symbol:MGG_02518 "ATP-dependent RNA helicase DHX8"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:CM001231 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K13117 RefSeq:XP_003709326.1 EnsemblFungi:MGG_02518T0
GeneID:2681615 KEGG:mgr:MGG_02518 Uniprot:G4MKC3
Length = 671
Score = 515 (186.3 bits), Expect = 1.1e-70, Sum P(2) = 1.1e-70
Identities = 138/420 (32%), Positives = 211/420 (50%)
Query: 543 STIEYICRHEGDGAILVFLTGWNDISKLLDQI--KVNKFLGDPNKFLVLPLHGSMPTINQ 600
ST+ + +E DG ILVFLTG ++I +D + + L LPL + T Q
Sbjct: 235 STVLDVHENEPDGDILVFLTGRDEIEAAVDAVSERTAHLTSQDRGLLPLPLFSGLSTEQQ 294
Query: 601 REIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISK 660
IF+ P N RK++ +TNIAE+S+TI +VYVVD G K +Y+ + L ISK
Sbjct: 295 MYIFEEAPANTRKVIFSTNIAEASVTISGIVYVVDSGFVKLRAYNPKTGIETLTAVPISK 354
Query: 661 ASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQLPEILRTPLQELCLHIKSLQLGTVGS 720
A+A QR GRAGR +PG C++LY + ++ +PE+ R+ L L +K+L + V
Sbjct: 355 AAAAQRAGRAGRTKPGKCFRLYTEESYTSLSDTNIPEVQRSNLAPFILQLKALGIDNVLH 414
Query: 721 FLSKALQPPDPLAVQNAIELLKTIGALDDMENLT-PLGRHLCTLPVDPNIGKMLLMGAIF 779
F L PP + A+ELL ++GALDD LT PLG + L VDP + K LL F
Sbjct: 415 F--DFLTPPPAELMTKALELLYSLGALDDYAKLTKPLGLRMAELAVDPMMAKTLLSAESF 472
Query: 780 QCLNPALTIAAAL-AHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAKR 838
CL+ LTIAA A + ++ +K+ + +R FA DH+ L + + +
Sbjct: 473 GCLSEMLTIAAMTSAGGDVWIQHEGERKQFESRRRKFAAGE-GDHLTFLNVYQAF--VTK 529
Query: 839 NRRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGF-VDKSKGPSAYNRYSHDL--EMV 895
R+E FC EN L+ T+ +R+Q L G VD++ S + E +
Sbjct: 530 GRKESGFCHENLLNYKTMSRAVSIRAQLKRYLERFGIRVDETLASGKTRGASPGVTGEQI 589
Query: 896 CAILCAGLYPNVVQCKRKGKRAVFYTKEVGQVA-LHPSSVNANQNNFPLPYMVYSEMVKT 954
L G + + + + G F T + G HPSS+ N+ ++++ E+++T
Sbjct: 590 RRCLTTGYFAHAARMQADG---TFQTVQGGTTLHAHPSSLMFNRK---ADWVIFHEVMET 643
Score = 236 (88.1 bits), Expect = 1.1e-70, Sum P(2) = 1.1e-70
Identities = 71/211 (33%), Positives = 95/211 (45%)
Query: 281 LPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNII-CTQPX 339
LP + K L V N V VV G+TG GKTTQ+PQF+ + S D +I TQP
Sbjct: 21 LPIARHKDSLLYVVESNPVTVVVGQTGSGKTTQIPQFLEKAGWCS----DGKLIGVTQPR 76
Query: 340 XXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVEDPDLSCV 399
E G +G+ VGY IR E S TR+ F T G+L+R+ + DP LS
Sbjct: 77 RIAATTVALRVAEEYGSEVGKEVGYSIRFEDVTSEATRIKFLTDGLLIREALVDPLLSRY 136
Query: 400 SHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYF---------- 449
S ++VDE HER ++ D SAT+ A+ F +F
Sbjct: 137 SIVMVDEAHERSVSTDILLGLLKKIRKKRPELRIIISSATLQAEQFLAFFSSTLGGSRQD 196
Query: 450 -----GNAPT-VHIPGLTFPVTDLFLEDVLE 474
G T V + G T+P+ L+LE E
Sbjct: 197 REEPQGTIGTIVSLEGRTYPIDILYLESPAE 227
>WB|WBGene00022056 [details] [associations]
symbol:Y67D2.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
GeneTree:ENSGT00700000104241 EMBL:FO081642 RefSeq:NP_497420.1
ProteinModelPortal:Q9BKQ8 SMR:Q9BKQ8 MINT:MINT-1068531
STRING:Q9BKQ8 PaxDb:Q9BKQ8 EnsemblMetazoa:Y67D2.6 GeneID:175308
KEGG:cel:CELE_Y67D2.6 UCSC:Y67D2.6 CTD:175308 WormBase:Y67D2.6
InParanoid:Q9BKQ8 KO:K13117 OMA:NIFVVPP NextBio:887600
Uniprot:Q9BKQ8
Length = 732
Score = 515 (186.3 bits), Expect = 1.3e-70, Sum P(2) = 1.3e-70
Identities = 130/412 (31%), Positives = 216/412 (52%)
Query: 544 TIEYICRHEGDGAILVFLTGWNDISKLLDQIK-VNKFLGDPNKFLVLPLHGSMPTINQRE 602
T+ I +HE G ILVFLTG +++ + ++++ + L + ++ V+P +G++P Q +
Sbjct: 286 TVINIHKHENPGDILVFLTGQDEVEDVCEKLRELAGNLKNCDRLWVVPCYGALPAREQMK 345
Query: 603 IFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKAS 662
FD P RK+V+ATNIAE+SITI + YV+D G K + A N + L+ +SKAS
Sbjct: 346 AFDSTPHGTRKVVVATNIAEASITIPGICYVIDTGYVKLRAQHAANGVETLMRVTVSKAS 405
Query: 663 AHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQLPEILRTPLQELCLHIKSLQLGTVGSFL 722
A QR GRAGR++PG CY+LYP + +PEI R + L +K+L + V F
Sbjct: 406 AEQRAGRAGRIRPGKCYRLYPESEFERFAEGTVPEIQRCQMASTILQLKALGVQNVHRF- 464
Query: 723 SKALQPPDPLAVQNAIELLKTIGALDDMENLT-PLGRHLCTLPVDPNIGKMLLMGAIFQC 781
L PP A+ N +ELL +GA+D+ LT PLG + P+ P K LL A F C
Sbjct: 465 -HYLSPPPSWAMINGLELLYALGAIDETSQLTSPLGLQMAEFPLPPMHSKCLLKSAEFGC 523
Query: 782 LNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAKRNRR 841
+TI A + ++ F+ P + + D ++ FA + DH+ +L F + + N R
Sbjct: 524 STEMVTIVAMMQIQDVFITPYRQRHQADVIRKKFAVEE-GDHMTMLNVFTKFVE---NGR 579
Query: 842 ERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYSHDLEMVCAILCA 901
+ +C ++F++ L +++RSQ + LL ++K N S ++ C L
Sbjct: 580 SKKWCSDHFVNYRGLMRADNVRSQLVRLLKRFE-IEKVSSRGLIN-CSENIRQ-C--LVT 634
Query: 902 GLYPNVVQCKRKGKRAVFYTKEVGQVALHPSSVNANQNNFPLPYMVYSEMVK 953
G + Q GK KE ++ S + ++P +++++E+++
Sbjct: 635 GFFSQAAQYHYTGKYMT--VKESFPFNMYKGSSIMFKKDYP-KWVIFTEVMQ 683
Score = 264 (98.0 bits), Expect = 1.3e-70, Sum P(2) = 1.3e-70
Identities = 69/216 (31%), Positives = 106/216 (49%)
Query: 262 QEKLKSSDSGKAMLSFRE---KLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFI 318
+E+LK ++ A L+ ++ +LP FK + L + +++ GETGCGK+TQ+PQF+
Sbjct: 55 EEQLKVHNNPYASLNIQQQRIRLPIFKNRGHILYMCERYRTIIIVGETGCGKSTQVPQFL 114
Query: 319 LEEELSSLRGADCNIICTQPXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRL 378
LE ++ G I+ TQP E+ LG VGY +R + T++
Sbjct: 115 LEAGWAA-DGRQ--IVITQPRRVAVVTLATRVAEEKDCILGHDVGYTVRFDDVSDKDTKV 171
Query: 379 LFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSA 438
F T G+LLR+++ DP LS S +++DE HER N D SA
Sbjct: 172 KFMTDGLLLREILADPLLSKYSIIMIDEAHERSCNTDILLGLLRKIIQIRNDLRIIVSSA 231
Query: 439 TINADLFSKYF-----GN-----APTVHIPGLTFPV 464
T++A+LF +F GN A + + G T PV
Sbjct: 232 TLDAELFKDFFEMNETGNSDKDTAGIISVEGRTHPV 267
>UNIPROTKB|F1SDW0 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:CU442751
Ensembl:ENSSSCT00000008044 Uniprot:F1SDW0
Length = 719
Score = 519 (187.8 bits), Expect = 1.9e-70, Sum P(2) = 1.9e-70
Identities = 133/403 (33%), Positives = 213/403 (52%)
Query: 541 VESTIEYICR-H--EGDGAILVFLTGWNDI----SKLLDQIKVNKFLGDPNKFLVLPLHG 593
++ST+E + + H EGDG IL FLTG ++ S L++Q + G VLP++
Sbjct: 258 IKSTVETVMKIHQTEGDGDILAFLTGQEEVETVVSMLIEQARALGRTGMKRHLRVLPMYA 317
Query: 594 SMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACL 653
+P+ Q ++F+R + RK+++ATN+AE+SITI +VYV+DCG K +Y+ + CL
Sbjct: 318 GLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIECL 377
Query: 654 LPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQLPEILRTPLQELCLHIKSL 713
+ +S+ASA+QR GRAGR + G CY+LY D + +PE+ R+ L + L +K+L
Sbjct: 378 VVVPVSQASANQRAGRAGRSRSGKCYRLYTEDAFDQLPQSTVPEMQRSNLAPVILQLKAL 437
Query: 714 QLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLT-PLGRHLCTLPVDPNIGKM 772
+ V F + PP ++ A+ELL +G LD LT PLG + P++P KM
Sbjct: 438 GIDNVLRF--HFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEFPLNPMFAKM 495
Query: 773 LLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDG 832
LL F C L+IAA + +N FV+P N + + R FA + DH+ +L ++
Sbjct: 496 LLESGNFGCSQEILSIAAMMQIQNIFVVPSNQKSQAIRVHRKFAVEE-GDHLTMLNVYEA 554
Query: 833 YKDAKRNRRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYSHDL 892
+ K N+ + +C E+FL+ L +R Q LL KS D
Sbjct: 555 F--IKHNKNSQ-WCQEHFLNYKGLVRAATVREQLKKLLVKFQVPKKSS--------EGDP 603
Query: 893 EMVCAILCAGLYPNVVQCKRKGKRAVFYT-KEVGQVALHPSSV 934
+ V + +G + N + G V+ T ++ ++ +HP+SV
Sbjct: 604 DPVLRCIVSGFFANAARFHSTG---VYRTIRDDHELHIHPASV 643
Score = 252 (93.8 bits), Expect = 1.9e-70, Sum P(2) = 1.9e-70
Identities = 67/202 (33%), Positives = 97/202 (48%)
Query: 278 REKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQ 337
R+KLP FK++ L + Q +V+ GETGCGK+TQ+PQ++ E ++ G + TQ
Sbjct: 51 RQKLPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWTA-EGRVVGV--TQ 107
Query: 338 PXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSA-QTRLLFCTTGVLLRQLVEDPDL 396
P ERG LG VGY IR + TR+ F T G+L+R+++ DP L
Sbjct: 108 PRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDPLATRIKFLTDGMLVREMMVDPLL 167
Query: 397 SCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGNAPTVH 456
+ S +++DE HER + D SAT++A+ F +F T
Sbjct: 168 TKYSAIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDAEKFRDFFNQNDTSD 227
Query: 457 IP----------GLTFPVTDLF 468
P G TFPV D+F
Sbjct: 228 PPRDTCVILTVEGRTFPV-DIF 248
Score = 243 (90.6 bits), Expect = 6.8e-38, Sum P(2) = 6.8e-38
Identities = 90/309 (29%), Positives = 142/309 (45%)
Query: 669 RAGRVQPGVCYKLYPRIIHDAMLPYQLPEILRTPLQELCLHIKSLQLGTVG--SFLS-KA 725
RAGR K Y DA QLP+ +Q L LQL +G + L
Sbjct: 390 RAGRAGRSRSGKCYRLYTEDAF--DQLPQSTVPEMQRSNLAPVILQLKALGIDNVLRFHF 447
Query: 726 LQPPDPLAVQNAIELLKTIGALDDMENLT-PLGRHLCTLPVDPNIGKMLLMGAIFQCLNP 784
+ PP ++ A+ELL +G LD LT PLG + P++P KMLL F C
Sbjct: 448 MSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQE 507
Query: 785 ALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAKRNRRERD 844
L+IAA + +N FV+P N + + R FA + DH+ +L ++ + K N+ +
Sbjct: 508 ILSIAAMMQIQNIFVVPSNQKSQAIRVHRKFAVEE-GDHLTMLNVYEAF--IKHNKNSQ- 563
Query: 845 FCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYSHDLEMVCAILCAGLY 904
+C E+FL+ L +R Q LL KS D + V + +G +
Sbjct: 564 WCQEHFLNYKGLVRAATVREQLKKLLVKFQVPKKSS--------EGDPDPVLRCIVSGFF 615
Query: 905 PNVVQCKRKGKRAVFYT-KEVGQVALHPSSVNANQNNFPLPYMVYSEMVKTNNINVYDST 963
N + G V+ T ++ ++ +HP+SV + P +++Y+E+++T+ + D T
Sbjct: 616 ANAARFHSTG---VYRTIRDDHELHIHPASVLYAEK--PPRWVIYNEVIQTSKYYMRDVT 670
Query: 964 NISEYALLL 972
I E A LL
Sbjct: 671 AI-ESAWLL 678
>ZFIN|ZDB-GENE-090313-193 [details] [associations]
symbol:tdrd9 "tudor domain containing 9"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0043046 "DNA methylation
involved in gamete generation" evidence=ISS] [GO:0071547 "piP-body"
evidence=ISS] [GO:0007140 "male meiosis" evidence=ISS] [GO:0009566
"fertilization" evidence=ISS] [GO:0007283 "spermatogenesis"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=IEA;ISS]
[GO:0034587 "piRNA metabolic process" evidence=ISS] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0007126 "meiosis"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0031047 "gene silencing by RNA" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 InterPro:IPR002999 ZFIN:ZDB-GENE-090313-193
GO:GO:0005524 GO:GO:0003676 Pfam:PF00567 SMART:SM00333
PROSITE:PS50304 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 GO:GO:0008026 EMBL:BX072537
IPI:IPI00488074 Ensembl:ENSDART00000124958 Bgee:F1RA66
Uniprot:F1RA66
Length = 1344
Score = 489 (177.2 bits), Expect = 4.3e-70, Sum P(2) = 4.3e-70
Identities = 133/376 (35%), Positives = 197/376 (52%)
Query: 551 HEGDGAILVFLTGWNDISKLLDQIKVNKFLGDPNKFLVLPLHGSMPTINQREIFDRPPPN 610
H G++LVFL G +I + + + +K + + V PLH ++ Q +F P P
Sbjct: 343 HPERGSVLVFLPGLAEIQYMKEAL--SKLVR--KRLQVYPLHSTVTLEEQNGVFLVPVPG 398
Query: 611 KRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRA 670
RKI+L+TNIAESS+T+ DV YV+D ++ + D CL +W SK S +QRRGRA
Sbjct: 399 YRKIILSTNIAESSVTVPDVKYVIDFCLVRQLACDKETNYRCLRITWASKTSCNQRRGRA 458
Query: 671 GRVQPGVCYKLYPRIIHDAMLP-YQLPEILRTPLQELCLHIKSLQLGTVGSFLSKALQPP 729
GRV G CY+L R + +P + +PE+LR+PL L +K L +G S LS AL PP
Sbjct: 459 GRVSKGFCYRLVTRHFWENEIPNFSIPEMLRSPLASTLLKVKLLDMGDPRSVLSTALTPP 518
Query: 730 DPLAVQNAIELLKTIGALDDMEN--------LTPLGRHLCTLPVDPNIGKMLLMGAIFQC 781
++ + LK IGAL N LT LGR L LPVD +GK++++G +F C
Sbjct: 519 ILGDIERTVLQLKQIGALSVQSNSQRQFDGDLTFLGRVLAQLPVDLQLGKLIVLGHVFGC 578
Query: 782 LNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAKRN-- 839
L L IAA+L+ ++ F +P Q +K SFA + SD IA + AF + ++
Sbjct: 579 LEECLIIAASLSLKSFFAMPSLQQLAGYRSKLSFAQNVPSDFIAYVNAFKAWYTSRAKGE 638
Query: 840 -RRERDFC-W--ENFLSPITLQMMEDMRSQFLDLLSDIG-F---VDKSKGPSAYNRYSHD 891
R +D W EN I ++ + ++ F DL + F + S P+ Y H
Sbjct: 639 LRHPKDELEWGKENC---IQIKRIREVAELFEDLKKRVSRFNMHISSSSNPTDYTSL-HK 694
Query: 892 LEMVCAILCAG-LYPN 906
+ ++ AG L+PN
Sbjct: 695 QRFILQVVIAGALFPN 710
Score = 311 (114.5 bits), Expect = 4.3e-70, Sum P(2) = 4.3e-70
Identities = 83/261 (31%), Positives = 123/261 (47%)
Query: 235 SVKVANTISPPQSDSAKERLNVILKERQEKLKSSDSGKAMLSFREK-LPAFKMKAEFLKA 293
S K + +S P+ + + + N K Q S ++ S+ LP K + E +
Sbjct: 43 SDKAFSELSSPEKEKSDDG-NQRRKRAQLPTGPGTSPPSLASYEYPILPITKNRQELVSL 101
Query: 294 VAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQPXXXXXXXXXXXXXXE 353
+ N V+++ G TG GKTTQLPQFIL+ R CN++ TQP E
Sbjct: 102 IENNSVVIIRGATGSGKTTQLPQFILDHYAE--RNIPCNLVVTQPRKIGATSIARWVARE 159
Query: 354 RGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMN 413
R LG VGYQ+ LE + T+L++ TTGVLL++LV L+ SH+ +DE+HER
Sbjct: 160 RKCTLGSLVGYQVGLEKMATEHTKLIYVTTGVLLQKLVSSKTLTEYSHIFIDEVHERSEE 219
Query: 414 EDFXXXXXXXXXXXXXXXXXXX-MSATINADLFSKYFGN--------APTVHIPGLTFPV 464
DF MSATIN F++YFG+ A + G + V
Sbjct: 220 LDFLLLVVRKLLRSNSRYVKVILMSATINCIEFAEYFGSPIRNQMNPAYVFEVEGAPYAV 279
Query: 465 TDLFLEDVLEKTRYKMNSKLD 485
+ +L+++ KT + LD
Sbjct: 280 EEYYLDEL--KTMLPVGVNLD 298
Score = 39 (18.8 bits), Expect = 1.8e-41, Sum P(2) = 1.8e-41
Identities = 11/46 (23%), Positives = 20/46 (43%)
Query: 230 RRPKLSVKVANTISPPQSDSAKERLNVILKERQEKLKSSDSGKAML 275
RR + + SPP S + + I K RQE + ++ ++
Sbjct: 64 RRKRAQLPTGPGTSPPSLASYEYPILPITKNRQELVSLIENNSVVI 109
>UNIPROTKB|E2RQN7 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:AAEX03013926
Ensembl:ENSCAFT00000014371 Uniprot:E2RQN7
Length = 702
Score = 508 (183.9 bits), Expect = 1.1e-69, Sum P(2) = 1.1e-69
Identities = 120/338 (35%), Positives = 189/338 (55%)
Query: 541 VESTIEYICR-H--EGDGAILVFLTGWNDI----SKLLDQIKVNKFLGDPNKFLVLPLHG 593
++ST+E + + H EGDG IL FLTG ++ S L++Q + G VLP++
Sbjct: 258 IKSTVETVMKIHQTEGDGDILAFLTGQEEVETVVSMLIEQARALGRTGMKRHLRVLPMYA 317
Query: 594 SMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACL 653
+P+ Q ++F+R + RK+++ATN+AE+SITI +VYV+DCG K +Y+ + CL
Sbjct: 318 GLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTTIECL 377
Query: 654 LPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQLPEILRTPLQELCLHIKSL 713
+ + +S+ASA+QR GRAGR + G CY+LY D + +PE+ R+ L + L +K+L
Sbjct: 378 VVAPVSQASANQRAGRAGRSRSGKCYRLYTEEAFDKLPQCTVPEMQRSNLAPVILQLKAL 437
Query: 714 QLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLT-PLGRHLCTLPVDPNIGKM 772
+ V F + PP ++ A+ELL +G LD LT PLG + P++P KM
Sbjct: 438 GIDNVLRF--HFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRVAEFPLNPMFAKM 495
Query: 773 LLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDG 832
LL F C L+IAA + +N FV+P N + + R FA + DH+ +L ++
Sbjct: 496 LLESGNFGCSQEILSIAAMMQIQNIFVVPGNQKSQAIRVHRKFAVEE-GDHLTMLNVYEA 554
Query: 833 YKDAKRNRRERDFCWENFLSPITLQMMEDMRSQFLDLL 870
+ K N+ + +C E+FL+ L +R Q LL
Sbjct: 555 F--IKHNKNSQ-WCQEHFLNYKGLIRAATVREQLKKLL 589
Score = 255 (94.8 bits), Expect = 1.1e-69, Sum P(2) = 1.1e-69
Identities = 68/202 (33%), Positives = 100/202 (49%)
Query: 278 REKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQ 337
R+KLP FK++ L V Q +V+ GETGCGK+TQ+PQ++ E ++ G + TQ
Sbjct: 51 RQKLPVFKLRNHILYLVENYQTVVIVGETGCGKSTQIPQYLAEAGWTA-EGRVVGV--TQ 107
Query: 338 PXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSA-QTRLLFCTTGVLLRQLVEDPDL 396
P ERG LG VGY IR + TR+ F T G+L+R+++ DP L
Sbjct: 108 PRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDPLATRIKFLTDGMLVREMMVDPLL 167
Query: 397 SCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYFG----NA 452
+ S +++DE HER + D SAT++A+ F +F +
Sbjct: 168 TKYSAIMLDEAHERTLYTDIAIGLLKKIQRKRGDLRLLVASATLDAEKFRDFFNQNETSD 227
Query: 453 PT------VHIPGLTFPVTDLF 468
PT + + G TFPV D+F
Sbjct: 228 PTRDTCVILTVEGRTFPV-DIF 248
Score = 70 (29.7 bits), Expect = 3.7e-20, Sum P(2) = 3.7e-20
Identities = 35/151 (23%), Positives = 64/151 (42%)
Query: 822 DHIALLKAFDGYKDAKRNRRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKG 881
DH+ +L ++ + K N+ + +C E+FL+ L +R Q LL KS
Sbjct: 544 DHLTMLNVYEAF--IKHNKNSQ-WCQEHFLNYKGLIRAATVREQLKKLLVKFQVPKKSS- 599
Query: 882 PSAYNRYSHDLEMVCAILCAGLYPNVVQCKRKGKRAVFYTKEVGQVALHPSSVNANQNNF 941
D + V + +G + N + G +V + +L+ + F
Sbjct: 600 -------EGDPDPVLRCIVSGFFANAARFHSTGAYSVILSPH----SLYLYYLTLFNRKF 648
Query: 942 PLPYMVYSEMVKTNNINVYDSTNISEYALLL 972
L ++Y+E+++T+ + D T I E A LL
Sbjct: 649 -LQKVIYNEVIQTSKYYMRDVTAI-ESAWLL 677
>UNIPROTKB|F1S3A8 [details] [associations]
symbol:DHX38 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104877 EMBL:CU914723
Ensembl:ENSSSCT00000003045 OMA:IATIPEI Uniprot:F1S3A8
Length = 766
Score = 433 (157.5 bits), Expect = 2.3e-69, Sum P(2) = 2.3e-69
Identities = 123/403 (30%), Positives = 201/403 (49%)
Query: 555 GAILVFLTGWNDISKLLDQIKVN-KFLGDPNKFLVLPLHGSMPTINQREIFDRPPPNKRK 613
G IL+F+ G DI DQI + + L + VLP++ +P+ Q +IF + P RK
Sbjct: 280 GDILIFMPGQEDIEVTSDQIVEHLEELENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRK 339
Query: 614 IVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRV 673
++ATNIAE+S+T+D +++V+D G K ++ + L IS+A+A+QR GRAGR
Sbjct: 340 CIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRT 399
Query: 674 QPGVCYKLYPRIIH-DAMLPYQLPEILRTPLQELCLHIKSLQLGTVGSFLSKALQPPDPL 732
PG C++LY + + + +L +PEI RT L + L +KSL + + F + PP
Sbjct: 400 GPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQF--HFMDPPPED 457
Query: 733 AVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGKMLLMGAIFQCLNPALTIAAAL 792
+ N++ L +GALD+ LT GR + P+DP + KML++ C + L I + L
Sbjct: 458 NMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSML 517
Query: 793 AHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAKRNRRERDFCWENFLS 852
+ F P ++E D+ + FA SDH+ L Y K N +C ++F+
Sbjct: 518 SVPAIFYRPKGREEESDQIREKFAVPE-SDHLTYLNV---YLQWKNNNYSTIWCNDHFIH 573
Query: 853 PITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYSHDLEMVCAILCAGLYPNVVQCKR 912
++ + ++R+Q D++ S G D ++V +CA + + K
Sbjct: 574 AKAMRKVREVRAQLKDIMVQQRMSLASCGT--------DWDIVRKCICAAYFHQAAKLKG 625
Query: 913 KGKRAVFYTKEVGQVA-LHPSSVNANQNNFPLPYMVYSEMVKT 954
G+ + G LHP+S P Y+VY E+V T
Sbjct: 626 IGE---YVNIRTGMPCHLHPTSSLFGMGYTP-DYIVYHELVMT 664
Score = 351 (128.6 bits), Expect = 2.3e-69, Sum P(2) = 2.3e-69
Identities = 78/212 (36%), Positives = 111/212 (52%)
Query: 258 LKERQEKLKSSDSGKAMLSFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQF 317
+K++ E K++L R+ LP F ++ E L + +N +++V GETG GKTTQL Q+
Sbjct: 48 MKKKSEASSEFAKKKSILEQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQY 107
Query: 318 ILEEELSSLRGADCNII-CTQPXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQT 376
+ E+ + D +I CTQP E G NLGE VGY IR E S T
Sbjct: 108 LHEDGYT-----DYGMIGCTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSEST 162
Query: 377 RLLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXM 436
+ + T G+LLR+ + + DL S +++DE HER +N D
Sbjct: 163 LIKYMTDGILLRESLREADLDHYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVT 222
Query: 437 SATINADLFSKYFGNAPTVHIPGLTFPVTDLF 468
SAT++A+ F+ +FGN P HIPG TFPV LF
Sbjct: 223 SATMDAEKFASFFGNVPIFHIPGRTFPVDILF 254
>FB|FBgn0052533 [details] [associations]
symbol:CG32533 species:7227 "Drosophila melanogaster"
[GO:0004386 "helicase activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:AE014298 GO:GO:0006200 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
OMA:DSDQVFH GeneTree:ENSGT00700000104421 EMBL:AY058623
RefSeq:NP_728244.1 UniGene:Dm.4145 SMR:Q9VWI5
EnsemblMetazoa:FBtr0074786 GeneID:32933 KEGG:dme:Dmel_CG32533
UCSC:CG32533-RA FlyBase:FBgn0052533 InParanoid:Q9VWI5
OrthoDB:EOG4V9S5G GenomeRNAi:32933 NextBio:781096 Uniprot:Q9VWI5
Length = 1139
Score = 509 (184.2 bits), Expect = 4.7e-69, Sum P(2) = 4.7e-69
Identities = 125/374 (33%), Positives = 199/374 (53%)
Query: 511 VDIDSNYKNYRASTRASLEAWSAEQIDLGLVESTIEYICRHEGDGAILVFLTGWNDISKL 570
+++ + + S R ++ Q+ L L++ +Y GD +L+F++G N+I +
Sbjct: 334 LELKAGQATSKRSQRNRIDPAPFVQV-LSLIDQ--QYPTSERGD--VLIFVSGVNEIESV 388
Query: 571 LDQIKVNKFLGDPNKFLVLPLHGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDV 630
++ V+++ + +LVLPLH +Q ++FD P RK +++TNIAE+S+T+D V
Sbjct: 389 VEA--VHEYATEQTHWLVLPLHSGQAIADQSKVFDYAPEGMRKCIVSTNIAETSLTVDGV 446
Query: 631 VYVVDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAM 690
+VVD GK KE ++DA K L W+SK+SA QR+GRAGR PGVC++LY ++A
Sbjct: 447 RFVVDSGKVKEMNFDATCKGQRLKEFWVSKSSADQRKGRAGRTGPGVCFRLYTAEQYNAF 506
Query: 691 LPYQLPEILRTPLQELCLHIKSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDM 750
Y PEI R PL + L + S+ L V +F ++ P+ ++ I LK AL
Sbjct: 507 EAYPTPEIYRVPLDTMLLQMVSMGLPDVRAF--PFIEAPETERIEQTILALKQHCALSVE 564
Query: 751 ENLTPLGRHLCTLPVDPNIGKMLLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDE 810
E +TPLGR L LPV+ +IGKMLLMG++F + LT+AA L+ +NP + +
Sbjct: 565 EKITPLGRSLANLPVELSIGKMLLMGSVFPEVEQLLTLAAMLSVQNPLTNRAHTDQRCVR 624
Query: 811 AKRSFAGDSCSDHIALLKAFDGYKDAKRNRR-ERDFCWENFLSPITLQMMEDMRSQFLDL 869
+ S D D L++ ++ + K R R +C + + +R QF +
Sbjct: 625 ERESLESDH-GDLFTLVRLYNVWVQLKMRRDGTRQWCRRLGIEEQRFYEVTKLRQQFQRI 683
Query: 870 LSDIGFVDKSKGPS 883
L G V S S
Sbjct: 684 LESCGMVVASDSDS 697
Score = 277 (102.6 bits), Expect = 4.7e-69, Sum P(2) = 4.7e-69
Identities = 66/189 (34%), Positives = 96/189 (50%)
Query: 278 REKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQ 337
+ LP + + + +A+ ++V++V+G+TGCGK+TQ+PQ++ + S I CTQ
Sbjct: 143 QRNLPIARFRKDLREALDTSRVVIVAGDTGCGKSTQVPQYLYDFGYRS-------IACTQ 195
Query: 338 PXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVEDPDLS 397
P E ++ G V +QIR E R+ T +LF T G+LLRQL +L
Sbjct: 196 PRRLACVSLCKRVAHELLDDYGSRVAFQIRFERSRTKLTNILFITEGLLLRQLAVAANLD 255
Query: 398 CVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGN--APTV 455
L++DEIHER + DF MSATIN +LF YFG A V
Sbjct: 256 QYDALILDEIHERNLFGDFLLGVTKCLLRARPQLKLILMSATINVELFHGYFGEEGARLV 315
Query: 456 HIPGLTFPV 464
+PG FP+
Sbjct: 316 QVPGRLFPI 324
>RGD|1310345 [details] [associations]
symbol:Dhx38 "DEAH (Asp-Glu-Ala-His) box polypeptide 38"
species:10116 "Rattus norvegicus" [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA;ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:1310345
GO:GO:0005524 GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00700000104421 OrthoDB:EOG4Z62MS
IPI:IPI00371467 PRIDE:D4A321 Ensembl:ENSRNOT00000019810
UCSC:RGD:1310345 Uniprot:D4A321
Length = 1228
Score = 433 (157.5 bits), Expect = 1.1e-68, Sum P(2) = 1.1e-68
Identities = 123/403 (30%), Positives = 201/403 (49%)
Query: 555 GAILVFLTGWNDISKLLDQIKVN-KFLGDPNKFLVLPLHGSMPTINQREIFDRPPPNKRK 613
G IL+F+ G DI DQI + + L + VLP++ +P+ Q +IF + P RK
Sbjct: 742 GDILIFMPGQEDIEVTSDQIVEHLEELENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRK 801
Query: 614 IVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRV 673
++ATNIAE+S+T+D +++V+D G K ++ + L IS+A+A+QR GRAGR
Sbjct: 802 CIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRT 861
Query: 674 QPGVCYKLYPRIIH-DAMLPYQLPEILRTPLQELCLHIKSLQLGTVGSFLSKALQPPDPL 732
PG C++LY + + + +L +PEI RT L + L +KSL + + F + PP
Sbjct: 862 GPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQF--HFMDPPPED 919
Query: 733 AVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGKMLLMGAIFQCLNPALTIAAAL 792
+ N++ L +GALD+ LT GR + P+DP + KML++ C + L I + L
Sbjct: 920 NMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSML 979
Query: 793 AHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAKRNRRERDFCWENFLS 852
+ F P ++E D+ + FA SDH+ L Y K N +C ++F+
Sbjct: 980 SVPAIFYRPKGREEESDQIREKFAVPE-SDHLTYLNV---YLQWKNNNYSTIWCNDHFIH 1035
Query: 853 PITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYSHDLEMVCAILCAGLYPNVVQCKR 912
++ + ++R+Q D++ S G D ++V +CA + + K
Sbjct: 1036 AKAMRKVREVRAQLKDIMVQQRMSLASCGT--------DWDIVRKCICAAYFHQAAKLKG 1087
Query: 913 KGKRAVFYTKEVGQVA-LHPSSVNANQNNFPLPYMVYSEMVKT 954
G+ + G LHP+S P Y+VY E+V T
Sbjct: 1088 IGE---YVNIRTGMPCHLHPTSSLFGMGYTP-DYIVYHELVMT 1126
Score = 355 (130.0 bits), Expect = 1.1e-68, Sum P(2) = 1.1e-68
Identities = 79/212 (37%), Positives = 111/212 (52%)
Query: 258 LKERQEKLKSSDSGKAMLSFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQF 317
+KE+ E K++L R+ LP F ++ E L + +N +++V GETG GKTTQL Q+
Sbjct: 510 MKEKSEASSEFAKKKSILEQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQY 569
Query: 318 ILEEELSSLRGADCNII-CTQPXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQT 376
+ ++ + D +I CTQP E G NLGE VGY IR E S T
Sbjct: 570 LHQDGYT-----DYGMIGCTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSENT 624
Query: 377 RLLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXM 436
+ + T G+LLR+ + + DL S +++DE HER +N D
Sbjct: 625 LIKYMTDGILLRESLREADLDHYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVT 684
Query: 437 SATINADLFSKYFGNAPTVHIPGLTFPVTDLF 468
SAT++AD F+ +FGN P HIPG TFPV LF
Sbjct: 685 SATMDADKFAAFFGNVPIFHIPGRTFPVDILF 716
>UNIPROTKB|Q608K8 [details] [associations]
symbol:MCA1482 "ATP-dependent helicase HrpA" species:243233
"Methylococcus capsulatus str. Bath" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR010222
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:AE017282 GenomeReviews:AE017282_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578
OMA:TYQFEPG InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:YP_113939.1 ProteinModelPortal:Q608K8 GeneID:3104911
KEGG:mca:MCA1482 PATRIC:22606802 Uniprot:Q608K8
Length = 1294
Score = 485 (175.8 bits), Expect = 1.2e-68, Sum P(2) = 1.2e-68
Identities = 128/385 (33%), Positives = 206/385 (53%)
Query: 520 YRASTRASLEAWSAEQIDLGLVESTIEYICRHEGDGAILVFLTGWNDISKLLDQIKVNKF 579
YR A E+ E+ + + ++ + R E G IL+FL+G +I + ++ +
Sbjct: 257 YRPPDSAEEESDETERGEQQAILDAVDELHR-ENTGDILIFLSGEREIRDTAESLRKHH- 314
Query: 580 LGDPNKFLVLPLHGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKA 639
P VLPL+ + Q +IF P +R+IVLATN+AE+S+T+ + V+D G A
Sbjct: 315 ---PADCEVLPLYSRLTVSEQEKIFK--PHGRRRIVLATNVAETSLTVPGIRGVIDAGYA 369
Query: 640 KETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQLPEIL 699
+ + Y +KL L IS+ASA+QR GR GRV PGVC +LY + PEIL
Sbjct: 370 RISRYSHRSKLQRLPIEKISRASANQRAGRCGRVGPGVCIRLYSEQDFLNRPEFTDPEIL 429
Query: 700 RTPLQELCLHIKSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRH 759
RT L + L +K+L LG + F ++PPD V++ + L+ I ALD LT LGR
Sbjct: 430 RTNLAAVILQMKALNLGDIRVF--PFVEPPDERLVRDGLRTLQEINALDAQGRLTELGRR 487
Query: 760 LCTLPVDPNIGKMLLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDS 819
L LPVDP +G++LL GA CL+ I AAL+ +P P + + D+ F
Sbjct: 488 LARLPVDPRLGRILLAGAEENCLSEVCIIVAALSVPDPRERPADKAQAADQKHARFRHPD 547
Query: 820 CSDHIALLKAFDGYKDAKRN---RRERDFCWENFLSPITLQMMEDMRSQFLDLLS-DIGF 875
SD +A+L ++ Y++ +++ + R +C +NFLS + ++ D+ Q L+++ ++G
Sbjct: 548 -SDFMAILALWNDYEEQRQHLSGSKLRQYCRDNFLSALRMREWRDIHQQILEVVKGELG- 605
Query: 876 VDKSKGPSAYNRYSHDLEMVCAILC 900
+ ++ P+ Y L + +LC
Sbjct: 606 LRPNQVPADYGEIHRAL--LTGLLC 628
Score = 301 (111.0 bits), Expect = 1.2e-68, Sum P(2) = 1.2e-68
Identities = 78/235 (33%), Positives = 111/235 (47%)
Query: 230 RRPKLSVKVANTISPPQSDSAKERLNVILKERQEKLKSSDSGKAMLSFREKLPAFKMKAE 289
RR +K + SPP + A E + ++ + + L + E+LP + + E
Sbjct: 24 RRRLQRLKASAGKSPPPEE-ALEAIARRIESSMALCSARMAAVPPLEYPEELPVSERRGE 82
Query: 290 FLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQPXXXXXXXXXXX 349
+A+ +NQV++V GETG GKTTQLP+ LE RG I TQP
Sbjct: 83 IAEAIRQNQVVIVCGETGSGKTTQLPKICLEAG----RGIQGYIGHTQPRRIAARSVAAR 138
Query: 350 XXXERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHE 409
E LGETVGY++R + + + T G+LL + D L L+VDE HE
Sbjct: 139 IADELKRPLGETVGYKVRFHDQTRPDSLIKLMTDGILLAETQTDRFLDQYDTLIVDEAHE 198
Query: 410 RGMNEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGNAPTVHIPGLTFPV 464
R +N DF SATI+ + FS++F NAP V +PG T+PV
Sbjct: 199 RSLNIDFLLGYLKWLLPRRHDLKLVITSATIDPERFSRHFDNAPIVRVPGRTYPV 253
Score = 47 (21.6 bits), Expect = 7.2e-22, Sum P(2) = 7.2e-22
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 631 VYVVDCGKAKETSYDALNKLACLLPSWISKASAH 664
V+++ + ETS +A + P WI K AH
Sbjct: 661 VWIISAEQV-ETSRVYARTVARIEPEWIEKCGAH 693
>UNIPROTKB|D3ZZG1 [details] [associations]
symbol:Dhx35 "Protein Dhx35" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1311165 GO:GO:0005524 GO:GO:0003676 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 IPI:IPI00951610
Ensembl:ENSRNOT00000068625 OrthoDB:EOG4V9TQ5 ArrayExpress:D3ZZG1
Uniprot:D3ZZG1
Length = 703
Score = 504 (182.5 bits), Expect = 2.1e-68, Sum P(2) = 2.1e-68
Identities = 128/402 (31%), Positives = 212/402 (52%)
Query: 541 VESTIEYICR-H--EGDGAILVFLTGWNDI----SKLLDQIKVNKFLGDPNKFLVLPLHG 593
+++T++ + + H EGDG IL FLTG ++ S L++Q + G VLP++
Sbjct: 258 IKATVDTVVKIHQTEGDGDILAFLTGQEEVETVVSMLIEQARALARTGMKKHLRVLPMYA 317
Query: 594 SMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACL 653
+P+ Q ++F+R + RK+++ATN+AE+SITI +VYV+DCG K +Y+ + CL
Sbjct: 318 GLPSFEQMKVFERVSHSVRKVIVATNVAETSITISGIVYVIDCGFMKLRAYNPRTAIECL 377
Query: 654 LPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQLPEILRTPLQELCLHIKSL 713
+ +S+ASA+QR GR GR + G CY+LY + + +PE+ R+ L + L +K+L
Sbjct: 378 VVVPVSQASANQRAGRGGRNRSGKCYRLYTEEAFEQLPQSTVPEMQRSNLAPVVLQLKAL 437
Query: 714 QLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLT-PLGRHLCTLPVDPNIGKM 772
+ +V F + PP ++ A+ELL +G LD LT PLG + P++P KM
Sbjct: 438 GIDSVLRF--HFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEFPLNPMFAKM 495
Query: 773 LLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDG 832
LL F C L+IAA + +N FV P N + + R FA + DH+ +L ++
Sbjct: 496 LLESGNFGCSQEILSIAAMMQIQNVFVFPSNQKSQATRVHRKFAVEE-GDHLTMLNVYEA 554
Query: 833 YKDAKRNRRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYSHDL 892
+ K N+ + +C E+FL+ L +R Q LL K + P + D
Sbjct: 555 F--IKHNKSSQ-WCQEHFLNYKGLVRAATVRDQLKKLLV------KFQVPKMSSEGDPDP 605
Query: 893 EMVCAILCAGLYPNVVQCKRKGKRAVFYTKEVGQVALHPSSV 934
+ C + +G + N + G A ++ ++ +HP+SV
Sbjct: 606 VLRCIV--SGFFANAARFHSTG--AYRTIRDDHELHIHPASV 643
Score = 250 (93.1 bits), Expect = 2.1e-68, Sum P(2) = 2.1e-68
Identities = 67/202 (33%), Positives = 98/202 (48%)
Query: 278 REKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQ 337
R+KLP FK++ L V Q +V+ GETGCGK+TQ+PQ++ E ++ G + TQ
Sbjct: 51 RQKLPVFKLRNHILYLVENYQTVVIVGETGCGKSTQVPQYLAEAGWTA-EGRVVGV--TQ 107
Query: 338 PXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSA-QTRLLFCTTGVLLRQLVEDPDL 396
P ERG LG VGY IR + TR+ F T G+L+R+++ DP L
Sbjct: 108 PRRVAAVTVAGRVADERGAVLGHEVGYCIRFDDCTDPLATRIKFLTDGMLVREMMVDPLL 167
Query: 397 SCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGNAPT-- 454
+ S +++DE HER + D SAT++A+ F +F T
Sbjct: 168 TKYSVVMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDAEKFRDFFNQNETSD 227
Query: 455 --------VHIPGLTFPVTDLF 468
+ + G TFPV D+F
Sbjct: 228 PARDTCVILTVEGRTFPV-DIF 248
Score = 239 (89.2 bits), Expect = 2.7e-37, Sum P(2) = 2.7e-37
Identities = 89/308 (28%), Positives = 141/308 (45%)
Query: 669 RAGRVQPGVCYKLYPRIIHDAMLPYQLPEILRTPLQELCLHIKSLQLGTVG--SFLS-KA 725
RAGR K Y +A QLP+ +Q L LQL +G S L
Sbjct: 390 RAGRGGRNRSGKCYRLYTEEAF--EQLPQSTVPEMQRSNLAPVVLQLKALGIDSVLRFHF 447
Query: 726 LQPPDPLAVQNAIELLKTIGALDDMENLT-PLGRHLCTLPVDPNIGKMLLMGAIFQCLNP 784
+ PP ++ A+ELL +G LD LT PLG + P++P KMLL F C
Sbjct: 448 MSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQE 507
Query: 785 ALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAKRNRRERD 844
L+IAA + +N FV P N + + R FA + DH+ +L ++ + K N+ +
Sbjct: 508 ILSIAAMMQIQNVFVFPSNQKSQATRVHRKFAVEE-GDHLTMLNVYEAF--IKHNKSSQ- 563
Query: 845 FCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYSHDLEMVCAILCAGLY 904
+C E+FL+ L +R Q LL K + P + D + C + +G +
Sbjct: 564 WCQEHFLNYKGLVRAATVRDQLKKLLV------KFQVPKMSSEGDPDPVLRCIV--SGFF 615
Query: 905 PNVVQCKRKGKRAVFYTKEVGQVALHPSSVNANQNNFPLPYMVYSEMVKTNNINVYDSTN 964
N + G A ++ ++ +HP+SV + P +++Y+E+++T+ + D T
Sbjct: 616 ANAARFHSTG--AYRTIRDDHELHIHPASVLYAEK--PPRWVIYNEVIQTSKYYMRDVTA 671
Query: 965 ISEYALLL 972
I E A LL
Sbjct: 672 I-ESAWLL 678
>UNIPROTKB|E2RC56 [details] [associations]
symbol:DHX38 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 KO:K12815 OMA:PSRSTWE CTD:9785
EMBL:AAEX03004090 RefSeq:XP_536800.2 ProteinModelPortal:E2RC56
Ensembl:ENSCAFT00000032225 GeneID:479669 KEGG:cfa:479669
NextBio:20854813 Uniprot:E2RC56
Length = 1226
Score = 433 (157.5 bits), Expect = 4.7e-68, Sum P(2) = 4.7e-68
Identities = 123/403 (30%), Positives = 201/403 (49%)
Query: 555 GAILVFLTGWNDISKLLDQIKVN-KFLGDPNKFLVLPLHGSMPTINQREIFDRPPPNKRK 613
G IL+F+ G DI DQI + + L + VLP++ +P+ Q +IF + P RK
Sbjct: 740 GDILIFMPGQEDIEVTSDQIVEHLEELENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRK 799
Query: 614 IVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRV 673
++ATNIAE+S+T+D +++V+D G K ++ + L IS+A+A+QR GRAGR
Sbjct: 800 CIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRT 859
Query: 674 QPGVCYKLYPRIIH-DAMLPYQLPEILRTPLQELCLHIKSLQLGTVGSFLSKALQPPDPL 732
PG C++LY + + + +L +PEI RT L + L +KSL + + F + PP
Sbjct: 860 GPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQF--HFMDPPPED 917
Query: 733 AVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGKMLLMGAIFQCLNPALTIAAAL 792
+ N++ L +GALD+ LT GR + P+DP + KML++ C + L I + L
Sbjct: 918 NMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSML 977
Query: 793 AHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAKRNRRERDFCWENFLS 852
+ F P ++E D+ + FA SDH+ L Y K N +C ++F+
Sbjct: 978 SVPAIFYRPKGREEESDQIREKFAVPE-SDHLTYLNV---YLQWKNNNYSTIWCNDHFIH 1033
Query: 853 PITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYSHDLEMVCAILCAGLYPNVVQCKR 912
++ + ++R+Q D++ S G D ++V +CA + + K
Sbjct: 1034 AKAMRKVREVRAQLKDIMVQQRMSLASCGT--------DWDIVRKCICAAYFHQAAKLKG 1085
Query: 913 KGKRAVFYTKEVGQVA-LHPSSVNANQNNFPLPYMVYSEMVKT 954
G+ + G LHP+S P Y+VY E+V T
Sbjct: 1086 IGE---YVNIRTGMPCHLHPTSSLFGMGYTP-DYIVYHELVMT 1124
Score = 349 (127.9 bits), Expect = 4.7e-68, Sum P(2) = 4.7e-68
Identities = 78/212 (36%), Positives = 111/212 (52%)
Query: 258 LKERQEKLKSSDSGKAMLSFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQF 317
+K++ E K++L R+ LP F ++ E L + +N +++V GETG GKTTQL Q+
Sbjct: 508 MKKKSEASSEFAKKKSILEQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQY 567
Query: 318 ILEEELSSLRGADCNII-CTQPXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQT 376
+ E+ + D +I CTQP E G NLGE VGY IR E S T
Sbjct: 568 LHEDGYT-----DYGMIGCTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSENT 622
Query: 377 RLLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXM 436
+ + T G+LLR+ + + DL S +++DE HER +N D
Sbjct: 623 LIKYMTDGILLRESLREADLDHYSAVIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVT 682
Query: 437 SATINADLFSKYFGNAPTVHIPGLTFPVTDLF 468
SAT++A+ F+ +FGN P HIPG TFPV LF
Sbjct: 683 SATMDAEKFAAFFGNVPIFHIPGRTFPVDILF 714
>UNIPROTKB|Q92620 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9606 "Homo sapiens" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;IDA;TAS]
[GO:0005634 "nucleus" evidence=NAS] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=TAS] [GO:0006406 "mRNA export from nucleus"
evidence=TAS] [GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0031124 "mRNA 3'-end
processing" evidence=TAS] Reactome:REACT_71 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AC004682
GO:GO:0005524 GO:GO:0005654 Reactome:REACT_1675 GO:GO:0003676
GO:GO:0006406 GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:CH471166 Reactome:REACT_1788
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0006369 GO:GO:0031124 Reactome:REACT_78
HOVERGEN:HBG039428 KO:K12815 OMA:PSRSTWE CTD:9785 EMBL:AF038391
EMBL:D86977 EMBL:BC004235 EMBL:BC008340 IPI:IPI00294211
RefSeq:NP_054722.2 UniGene:Hs.151218 ProteinModelPortal:Q92620
SMR:Q92620 IntAct:Q92620 STRING:Q92620 PhosphoSite:Q92620
DMDM:85700389 PaxDb:Q92620 PeptideAtlas:Q92620 PRIDE:Q92620
DNASU:9785 Ensembl:ENST00000268482 GeneID:9785 KEGG:hsa:9785
UCSC:uc002fcb.3 GeneCards:GC16P072127 HGNC:HGNC:17211 HPA:HPA041347
MIM:605584 neXtProt:NX_Q92620 PharmGKB:PA27225 InParanoid:Q92620
OrthoDB:EOG4Z62MS PhylomeDB:Q92620 ChiTaRS:DHX38 GenomeRNAi:9785
NextBio:36846 ArrayExpress:Q92620 Bgee:Q92620 CleanEx:HS_DHX38
Genevestigator:Q92620 GermOnline:ENSG00000140829 Uniprot:Q92620
Length = 1227
Score = 433 (157.5 bits), Expect = 4.7e-68, Sum P(2) = 4.7e-68
Identities = 123/403 (30%), Positives = 201/403 (49%)
Query: 555 GAILVFLTGWNDISKLLDQIKVN-KFLGDPNKFLVLPLHGSMPTINQREIFDRPPPNKRK 613
G IL+F+ G DI DQI + + L + VLP++ +P+ Q +IF + P RK
Sbjct: 741 GDILIFMPGQEDIEVTSDQIVEHLEELENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRK 800
Query: 614 IVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRV 673
++ATNIAE+S+T+D +++V+D G K ++ + L IS+A+A+QR GRAGR
Sbjct: 801 CIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRT 860
Query: 674 QPGVCYKLYPRIIH-DAMLPYQLPEILRTPLQELCLHIKSLQLGTVGSFLSKALQPPDPL 732
PG C++LY + + + +L +PEI RT L + L +KSL + + F + PP
Sbjct: 861 GPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQF--HFMDPPPED 918
Query: 733 AVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGKMLLMGAIFQCLNPALTIAAAL 792
+ N++ L +GALD+ LT GR + P+DP + KML++ C + L I + L
Sbjct: 919 NMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSML 978
Query: 793 AHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAKRNRRERDFCWENFLS 852
+ F P ++E D+ + FA SDH+ L Y K N +C ++F+
Sbjct: 979 SVPAIFYRPKGREEESDQIREKFAVPE-SDHLTYLNV---YLQWKNNNYSTIWCNDHFIH 1034
Query: 853 PITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYSHDLEMVCAILCAGLYPNVVQCKR 912
++ + ++R+Q D++ S G D ++V +CA + + K
Sbjct: 1035 AKAMRKVREVRAQLKDIMVQQRMSLASCGT--------DWDIVRKCICAAYFHQAAKLKG 1086
Query: 913 KGKRAVFYTKEVGQVA-LHPSSVNANQNNFPLPYMVYSEMVKT 954
G+ + G LHP+S P Y+VY E+V T
Sbjct: 1087 IGE---YVNIRTGMPCHLHPTSSLFGMGYTP-DYIVYHELVMT 1125
Score = 349 (127.9 bits), Expect = 4.7e-68, Sum P(2) = 4.7e-68
Identities = 78/212 (36%), Positives = 110/212 (51%)
Query: 258 LKERQEKLKSSDSGKAMLSFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQF 317
+K + E K++L R+ LP F ++ E L + +N +++V GETG GKTTQL Q+
Sbjct: 509 MKRKSEASSEFAKKKSILEQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQY 568
Query: 318 ILEEELSSLRGADCNII-CTQPXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQT 376
+ E+ + D +I CTQP E G NLGE VGY IR E S T
Sbjct: 569 LHEDGYT-----DYGMIGCTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSENT 623
Query: 377 RLLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXM 436
+ + T G+LLR+ + + DL S +++DE HER +N D
Sbjct: 624 LIKYMTDGILLRESLREADLDHYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVT 683
Query: 437 SATINADLFSKYFGNAPTVHIPGLTFPVTDLF 468
SAT++A+ F+ +FGN P HIPG TFPV LF
Sbjct: 684 SATMDAEKFAAFFGNVPIFHIPGRTFPVDILF 715
>UNIPROTKB|F1S9V4 [details] [associations]
symbol:TDRD9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071547 "piP-body" evidence=IEA] [GO:0043046 "DNA
methylation involved in gamete generation" evidence=IEA]
[GO:0034587 "piRNA metabolic process" evidence=IEA] [GO:0009566
"fertilization" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0007140 "male meiosis" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
InterPro:IPR002999 GO:GO:0005524 GO:GO:0005634 GO:GO:0009566
GO:GO:0007283 GO:GO:0003676 GO:GO:0007140 Pfam:PF00567
SMART:SM00333 PROSITE:PS50304 GO:GO:0043046 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0034587
GeneTree:ENSGT00700000104393 GO:GO:0008026 GO:GO:0071547
OMA:INDWFTI EMBL:CU693433 Ensembl:ENSSSCT00000002836
ArrayExpress:F1S9V4 Uniprot:F1S9V4
Length = 1333
Score = 491 (177.9 bits), Expect = 5.2e-68, Sum P(2) = 5.2e-68
Identities = 126/370 (34%), Positives = 194/370 (52%)
Query: 556 AILVFLTGWNDISKLLDQIKVNKFLGDPNKFLVLPLHGSMPTINQREIFDRPPPNKRKIV 615
++LVFL G +I+ + ++ N + V PLH S+ Q +F P P RK++
Sbjct: 394 SVLVFLPGLGEIN-CMHELLTNMV---HKRLQVYPLHSSVTLEEQNNVFLSPVPGYRKVI 449
Query: 616 LATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASAHQRR-GRAGRVQ 674
L+TNIAESS+T+ DV YV+D + D L SW SK S +QR+ GRAGRV
Sbjct: 450 LSTNIAESSVTVPDVKYVIDFCLTRTLVCDEDTNYQSLRLSWASKTSCNQRKEGRAGRVS 509
Query: 675 PGVCYKLYPRIIHDAMLP-YQLPEILRTPLQELCLHIKSLQLGTVGSFLSKALQPPDPLA 733
G CY+L P+ D +P + +PE+LR PL L +K L +G + L+ AL PP
Sbjct: 510 KGYCYRLVPKDFWDTSIPDHVIPEMLRCPLGSTILKLKLLDMGEPRALLATALSPPSLGD 569
Query: 734 VQNAIELLKTIGALD-----DMEN-----LTPLGRHLCTLPVDPNIGKMLLMGAIFQCLN 783
++ I LLK +GAL D EN LT LGR L LPV+ +GK++++G +F CL+
Sbjct: 570 IERTILLLKEVGALAVRGPRDDENPHDGELTFLGRVLAHLPVNQQLGKLIVLGHVFGCLD 629
Query: 784 PALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAKRN---R 840
L IAA+L+ +N F +P + +K +F+G S SD IAL++AF ++ ++ R
Sbjct: 630 ECLIIAASLSLKNFFAMPFRQHLDGYRSKMNFSGSSKSDCIALVEAFKAWQTCRQRGELR 689
Query: 841 RERD-FCWE--NFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYSHDLEMVCA 897
+D W N++ ++ + ++ + +S + P Y H +
Sbjct: 690 HPKDELDWGRLNYIQIKRIREVAELYEELKSRVSQFNMHADCRRPVLDREYPHKQRFILQ 749
Query: 898 ILCAG-LYPN 906
++ AG YPN
Sbjct: 750 VVLAGAFYPN 759
Score = 289 (106.8 bits), Expect = 5.2e-68, Sum P(2) = 5.2e-68
Identities = 83/282 (29%), Positives = 128/282 (45%)
Query: 281 LPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQPXX 340
LP + K E + + N V+++ G TG GK+TQLPQ+IL+ + R CNI+ TQP
Sbjct: 139 LPINRCKEEVISLIESNSVVIIHGATGSGKSTQLPQYILDRSVQ--RSTYCNIVVTQPRK 196
Query: 341 XXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVEDPDLSCVS 400
ER LG VGYQ+ LE + T+L++ TTGVLL+++V L +
Sbjct: 197 IGASSIARWISKERAWTLGGLVGYQVGLEKIATEDTKLIYMTTGVLLQKIVSAKSLMEFT 256
Query: 401 HLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXX-MSATINADLFSKYFG-------NA 452
H+ +DE+HER DF MSATI+ F+ YF N
Sbjct: 257 HIFIDEVHERTEEMDFLLLVVRKLLRTNSRFVKVVLMSATISCKEFADYFAVPVQNELNP 316
Query: 453 PTVH-IPGLTFPVTDLFLEDVLEKTRYKMNSKLDSFQGNXXXXXXQDSKKDHLTALFEDV 511
V+ + G + V + +L+D+ R +++ L + + L LF+D+
Sbjct: 317 ACVYEVEGEPYAVEECYLDDLEHLHRGRLSPHL--LEEPAIPTEIYEVAVS-LIQLFDDL 373
Query: 512 DI-DSNYKNYRASTRASLEAWSAEQIDLGLVESTIEYICRHE 552
D+ +S K + + AW + L + E C HE
Sbjct: 374 DMKESGNKTWSGAP----SAWERSSV-LVFLPGLGEINCMHE 410
Score = 38 (18.4 bits), Expect = 1.3e-41, Sum P(2) = 1.3e-41
Identities = 5/16 (31%), Positives = 12/16 (75%)
Query: 395 DLSCVSHLLVDEIHER 410
+++C+ LL + +H+R
Sbjct: 404 EINCMHELLTNMVHKR 419
>FB|FBgn0031631 [details] [associations]
symbol:CG3225 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:AE014134 GO:GO:0006200
GO:GO:0003676 GO:GO:0004386 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GO:GO:0016779 GeneTree:ENSGT00700000104241 KO:K13117 OMA:NIFVVPP
EMBL:AY069418 RefSeq:NP_608860.1 UniGene:Dm.300 SMR:Q9VR29
DIP:DIP-18193N IntAct:Q9VR29 MINT:MINT-288733
EnsemblMetazoa:FBtr0077416 GeneID:33680 KEGG:dme:Dmel_CG3225
UCSC:CG3225-RA FlyBase:FBgn0031631 InParanoid:Q9VR29
OrthoDB:EOG4H189P GenomeRNAi:33680 NextBio:784751 Uniprot:Q9VR29
Length = 678
Score = 488 (176.8 bits), Expect = 7.6e-68, Sum P(2) = 7.6e-68
Identities = 137/425 (32%), Positives = 216/425 (50%)
Query: 541 VESTIEYICR-HEGD--GAILVFLTGWNDISKLLDQIKVNKFLGDPNKFLVLPLHGSMPT 597
V+ T+E + + H+ + G IL FLTG ++ + LD ++ + VLP++GSM +
Sbjct: 245 VKETVETVWKLHQKEPPGDILAFLTGQEEVLEALDLLREYIASSEQENLKVLPMYGSMSS 304
Query: 598 INQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSW 657
+Q +F PP RK+VLATNIAE+SITI +VYV+DCG K Y+ L+
Sbjct: 305 TDQLSVFFTPPKGTRKVVLATNIAETSITIPGIVYVIDCGYVKVKWYNPKTCSDSLVIVP 364
Query: 658 ISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQLPEILRTPLQELCLHIKSLQLGT 717
+SKASA QR GRAGR++PG Y+LY + ++A+ P Q PE+ R+ L L +K+L +G
Sbjct: 365 VSKASAIQRAGRAGRMRPGKVYRLYTKSDYEALAPRQPPEMRRSELSGAILQLKALGIGN 424
Query: 718 VGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLT-PLGRHLCTLPVDPNIGKMLLMG 776
+ F + PP + +A+E L + A+D+ NLT P+G L LP + KML +
Sbjct: 425 ILRFDFPS--PPPAQNLLSALESLFALDAIDEQGNLTKPVGYLLAELPFSAMLSKMLYVS 482
Query: 777 AIFQCLNPALTIAAALAHRNPFVLPVNM--QKEVDEAKRSFAGDSCSDHIALLKAFDGYK 834
C +TI A L ++ F P + Q+ A R F D I +L A+ G+
Sbjct: 483 GQMGCSEEIITIIALLQVQSIFSRPASAVAQQSGRIAHRKFEVAE-GDFITMLNAYTGFV 541
Query: 835 DAKRNRRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYSHDLEM 894
+ + +FC + FL L+ +R Q + + K G ++ D+E
Sbjct: 542 EEGMTK---EFCGQYFLIYRNLKRAHSLREQLITVAR------KKYGIPIFS-CKGDVEK 591
Query: 895 VCAILCAGLYPNVVQCKRKGKRAVFYTKEVG-QVALHPSSVNANQNNFP-LPYMVYSEMV 952
+C + AG + V G V+ G ++A+HP N+ P Y+VY E++
Sbjct: 592 LCKCITAGFFTQVAYLHHSG---VYRQISSGTELAIHP---NSTLYTLPQAQYVVYGELL 645
Query: 953 KTNNI 957
+T +
Sbjct: 646 QTTKL 650
Score = 260 (96.6 bits), Expect = 7.6e-68, Sum P(2) = 7.6e-68
Identities = 65/204 (31%), Positives = 106/204 (51%)
Query: 274 MLSFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNI 333
++ RE+LP + + + L + ++QV+++ GETG GK+TQ+PQ++ E + +G I
Sbjct: 40 LMEQRERLPIRQYRDQILYCLEKHQVVILVGETGSGKSTQVPQYLYEWGWHT-KGL---I 95
Query: 334 ICTQPXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVED 393
T+P ERGE +G+TVGY +R S+ T++ F T G+LLR+++ D
Sbjct: 96 GITEPRRVSTVTLANRVAQERGELVGDTVGYVVRFLESMSSCTKIKFMTEGILLREVLAD 155
Query: 394 PDLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYF---G 450
P L+ ++VDE HER M D SATI+A FS++F G
Sbjct: 156 PLLTQYGVIIVDEAHERNMLTDMILGLLKKILRKRSSLKLIISSATIDASFFSEFFSWPG 215
Query: 451 NAPT---VHIPGLTFPVTDLFLED 471
+ + I G PV++ +L +
Sbjct: 216 SGEVSVKLSIEGRMHPVSNFYLNE 239
>UNIPROTKB|Q17R09 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9913 "Bos taurus" [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0005681 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428 KO:K12815
EMBL:BC118085 IPI:IPI00690755 RefSeq:NP_001069266.1
UniGene:Bt.42896 ProteinModelPortal:Q17R09 STRING:Q17R09
PRIDE:Q17R09 GeneID:520046 KEGG:bta:520046 CTD:9785
NextBio:20873012 Uniprot:Q17R09
Length = 1227
Score = 434 (157.8 bits), Expect = 3.8e-67, Sum P(3) = 3.8e-67
Identities = 123/403 (30%), Positives = 202/403 (50%)
Query: 555 GAILVFLTGWNDISKLLDQIKVN-KFLGDPNKFLVLPLHGSMPTINQREIFDRPPPNKRK 613
G IL+F+ G DI DQI + + L + VLP++ +P+ Q +IF + P RK
Sbjct: 741 GDILIFMPGQEDIEVTSDQIVEHLEELENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRK 800
Query: 614 IVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRV 673
++ATNIAE+S+T+D +++V+D G K ++ + L IS+A+A+QR GRAGR
Sbjct: 801 CIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRT 860
Query: 674 QPGVCYKLYPRIIH-DAMLPYQLPEILRTPLQELCLHIKSLQLGTVGSFLSKALQPPDPL 732
PG C++LY + + + +L +PEI RT L + L +KSL + + F + PP
Sbjct: 861 GPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQF--HFMDPPPED 918
Query: 733 AVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGKMLLMGAIFQCLNPALTIAAAL 792
+ N++ L +GALD+ LT GR + P+DP + KML++ C + L I + L
Sbjct: 919 NMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSML 978
Query: 793 AHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAKRNRRERDFCWENFLS 852
+ F P ++E D+ + FA SDH++ L Y K N +C ++F+
Sbjct: 979 SVPAIFYRPKGREEESDQIREKFAVPE-SDHLSYLNV---YLQWKNNNYSTIWCNDHFIH 1034
Query: 853 PITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYSHDLEMVCAILCAGLYPNVVQCKR 912
++ + ++R+Q D++ S G D ++V +CA + + K
Sbjct: 1035 AKAMRKVREVRAQLKDIMVQQRMSLASCGT--------DWDIVRKCICAAYFHQAAKLKG 1086
Query: 913 KGKRAVFYTKEVGQVA-LHPSSVNANQNNFPLPYMVYSEMVKT 954
G+ + G LHP+S P Y+VY E+V T
Sbjct: 1087 IGE---YVNIRTGMPCHLHPTSSLFGMGYTP-DYIVYHELVMT 1125
Score = 351 (128.6 bits), Expect = 3.8e-67, Sum P(3) = 3.8e-67
Identities = 78/212 (36%), Positives = 111/212 (52%)
Query: 258 LKERQEKLKSSDSGKAMLSFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQF 317
+K++ E K++L R+ LP F ++ E L + +N +++V GETG GKTTQL Q+
Sbjct: 509 MKKKSEASSEFAKKKSILEQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQY 568
Query: 318 ILEEELSSLRGADCNII-CTQPXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQT 376
+ E+ + D +I CTQP E G NLGE VGY IR E S T
Sbjct: 569 LHEDGYT-----DYGMIGCTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSEST 623
Query: 377 RLLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXM 436
+ + T G+LLR+ + + DL S +++DE HER +N D
Sbjct: 624 LIKYMTDGILLRESLREADLDHYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVT 683
Query: 437 SATINADLFSKYFGNAPTVHIPGLTFPVTDLF 468
SAT++A+ F+ +FGN P HIPG TFPV LF
Sbjct: 684 SATMDAEKFASFFGNVPIFHIPGRTFPVDILF 715
Score = 37 (18.1 bits), Expect = 3.8e-67, Sum P(3) = 3.8e-67
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 259 KERQEKLKSSDSGKAMLS 276
KER+EK D K+ +S
Sbjct: 60 KEREEKDDGEDKKKSRIS 77
>CGD|CAL0002409 [details] [associations]
symbol:orf19.5865 species:5476 "Candida albicans" [GO:0071006
"U2-type catalytic step 1 spliceosome" evidence=IEA] [GO:0000349
"generation of catalytic spliceosome for first transesterification
step" evidence=IEA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
CGD:CAL0002409 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AACQ01000003 EMBL:AACQ01000004
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K12814 RefSeq:XP_722935.1 RefSeq:XP_723081.1 GeneID:3635187
GeneID:3635307 KEGG:cal:CaO19.13287 KEGG:cal:CaO19.5865
Uniprot:Q5ANN5
Length = 865
Score = 429 (156.1 bits), Expect = 4.6e-67, Sum P(2) = 4.6e-67
Identities = 131/429 (30%), Positives = 212/429 (49%)
Query: 555 GAILVFLTGWNDISKLLDQIKVNKF-LGDP-NKFLVLPLHGSMPTINQREIFDRPPPNKR 612
G ILVFLTG ++I + + ++ + LGD + +V ++ ++P Q++IF P N R
Sbjct: 443 GDILVFLTGQDEIETMEEILRDSILKLGDQIDPMIVCSIYANLPQELQQKIFQPTPSNTR 502
Query: 613 KIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGR 672
KIVLATNIAE+SITID + YV+D G K+ Y+ + L+ S+ASA QR GRAGR
Sbjct: 503 KIVLATNIAETSITIDGISYVIDPGYVKQNVYNPTTGMESLVVVPCSRASADQRAGRAGR 562
Query: 673 VQPGVCYKLYPR-IIHDAMLPYQLPEILRTPLQELCLHIKSLQLGTVGSFLSKALQPPDP 731
V PG C++L+ + ++ + Q PEI R L + L + SL + + F + + PP
Sbjct: 563 VGPGKCFRLFTKWSFYNELDSNQQPEIQRVNLTSVILLLLSLGINDLLGF--EFMDPPSK 620
Query: 732 LAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGKMLLMGAIFQCLNPALTIAAA 791
A+ A+ LL +GAL+ LT G+ + P+DP K +L F ++I A
Sbjct: 621 EAIIKALNLLYALGALNTQGKLTKTGKKMSEFPLDPVFTKCILTSDKFDNTKQIISIIAM 680
Query: 792 LAHR-NPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAKRNRRERDFCWENF 850
L N F P + ++ D+ K+ F D D LLK + + D+ + + +C + F
Sbjct: 681 LNESSNLFYRPKDKKELADKRKQEF-NDLQGDQFMLLKIWQQWVDSGYSVQ---WCQDYF 736
Query: 851 LSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSA--YNRYSHDLEMVCAILCAGLYPNVV 908
+ T++ ++++ Q + L IG S+ + + ++ L +G + N+V
Sbjct: 737 IQYKTMKRIKNIYEQLIRLSKKIGIEVNSRHQHRDHLQENTDNNTLLTKCLISGFFNNIV 796
Query: 909 QCKRKGKRAVFYTKEVG----QVALHPSSVNANQNNFPLPYMVYSEMVKTN-----NINV 959
+ G T G +HPSS P Y++Y E+V T+ N +
Sbjct: 797 KLSPMGDCYQKLTNGKGGNNTPCYIHPSSCIYKLKPKP-KYLLYYELVLTSKEYMRNCII 855
Query: 960 YDSTNISEY 968
D I EY
Sbjct: 856 LDEKLIKEY 864
Score = 337 (123.7 bits), Expect = 4.6e-67, Sum P(2) = 4.6e-67
Identities = 79/211 (37%), Positives = 110/211 (52%)
Query: 259 KERQEKLKSSDS--GKAMLSFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQ 316
+E + ++ SDS G R+ LP + + EFLK + ENQ L+V GETG GKTTQLPQ
Sbjct: 205 EEEESGIRDSDSIIGNKYDEVRKSLPVYSYREEFLKIINENQTLIVVGETGSGKTTQLPQ 264
Query: 317 FILEEELSSLRGADCNIICTQPXXXXXXXXXXXXXXERGENLGETVGYQIRLESK-RSAQ 375
++ E S R I CTQP E LGE VGY IR + +
Sbjct: 265 YLHEAGYS--RNNQV-IACTQPRRVAATSVANRVANEMQVKLGEQVGYNIRFDDNCKDGV 321
Query: 376 TRLLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXX 435
T + + T G+LLR+ ++DP L S +++DE HER ++ +
Sbjct: 322 TVIKYVTDGMLLREFLQDPTLGKYSAIMIDEAHERTLSTEILLSLLKDVMMTTRKDDLKI 381
Query: 436 M--SATINADLFSKYFGNAPTVHIPGLTFPV 464
+ SATINA+ FS++F NAP ++IPG FPV
Sbjct: 382 IIASATINAEKFSQFFNNAPILNIPGRRFPV 412
>UNIPROTKB|O83538 [details] [associations]
symbol:TP_0526 "ATP-dependent helicase (HrpA)"
species:243276 "Treponema pallidum subsp. pallidum str. Nichols"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AE000520
GenomeReviews:AE000520_GR PIR:H71312 RefSeq:NP_218966.1
ProteinModelPortal:O83538 IntAct:O83538 GeneID:2610764
KEGG:tpa:TP0526 PATRIC:20531093 OMA:WEYRERF ProtClustDB:CLSK507866
Uniprot:O83538
Length = 668
Score = 476 (172.6 bits), Expect = 5.3e-67, Sum P(2) = 5.3e-67
Identities = 115/354 (32%), Positives = 189/354 (53%)
Query: 524 TRASLEAWSAEQIDLGLVESTIEYICRHEGDGAILVFLTGWNDISKLLDQIKVNKFLGDP 583
T AS AE L + +E + GAIL+FL G I + ++ ++
Sbjct: 195 TPASTHTKEAEAALLEKIVCIVERVIASRDKGAILIFLPGERSIKNCITRLSHERWF--- 251
Query: 584 NKFLVLPLHGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETS 643
K +LPL+G + Q ++F+R P KRK+V+ATNIAE+SITIDDV V+D G K S
Sbjct: 252 RKLFLLPLYGRLSKEEQEQVFNRAPFGKRKVVIATNIAETSITIDDVTTVIDSGLVKLNS 311
Query: 644 YDALNKLACLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQLPEILRTPL 703
Y+ L+ A L + IS+AS +QRRGRAGRV+ G CY+LY R + PY L EI RT L
Sbjct: 312 YNPLSYTASLDETPISQASCNQRRGRAGRVRAGTCYRLYSRDDFEQREPYTLEEIYRTDL 371
Query: 704 QELCLHIKSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTL 763
E+ + + L + F + PP + A + L+ +GAL+D +L+ +G+ +C
Sbjct: 372 SEVVMRMAELGIHDFEHF--DFISPPGTHGIIGAEDTLRLLGALEDDRSLSEIGKMMCLF 429
Query: 764 PVDPNIGKMLL--MGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCS 821
P+ P +M++ + ++ L AA L+ R+P + + +++ +A +F+ D
Sbjct: 430 PLGPRQSRMIVEALRRYPHSIDDVLIAAAFLSARSPLIFSEDQEEKTKKAHGTFS-DPMG 488
Query: 822 DHIALLKAFDGYKDAKRNRRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGF 875
D ++ L+ + Y A+ N + FC +L + + +++ Q ++S +GF
Sbjct: 489 DFVSFLRIYRAY--AQENNKH-SFCQHFYLDERIMAEISNIKEQLELIVSGMGF 539
Score = 267 (99.0 bits), Expect = 5.3e-67, Sum P(2) = 5.3e-67
Identities = 68/195 (34%), Positives = 96/195 (49%)
Query: 274 MLSFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNI 333
M S+++ LP + K + L A+A + V+VV TG GKTTQLP IL E + GA I
Sbjct: 1 MFSYKQ-LPVYSQKDKILSALAHHHVIVVESPTGSGKTTQLP-LILHEAGYNEGGA---I 55
Query: 334 ICTQPXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVED 393
TQP + VGY++R E +T++ T G+LL+++ D
Sbjct: 56 GVTQPRRIAVLSVSEFIAKQVLHVQPGIVGYKMRFEDHTDVETKIKVMTDGILLQEMKLD 115
Query: 394 PDLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGNAP 453
P LS S ++VDE HER +N DF SATIN +FS+YF P
Sbjct: 116 PLLSKYSIIMVDEAHERSLNIDFILGLLKRVLQQRHDFRIVISSATINTAMFSRYFNECP 175
Query: 454 TVHIPGLTFPVTDLF 468
+ I + +PVT +F
Sbjct: 176 VIKIDAVAYPVTVIF 190
Score = 37 (18.1 bits), Expect = 8.4e-43, Sum P(2) = 8.4e-43
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 159 LHFHAYNKGKALAVSK 174
LH YN+G A+ V++
Sbjct: 44 LHEAGYNEGGAIGVTQ 59
>DICTYBASE|DDB_G0285843 [details] [associations]
symbol:helD "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS] [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=ISS] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 dictyBase:DDB_G0285843 GO:GO:0005524
GenomeReviews:CM000153_GR GO:GO:0005681 GO:GO:0003676
EMBL:AAFI02000082 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
KO:K12815 RefSeq:XP_638016.1 EnsemblProtists:DDB0191460
GeneID:8625367 KEGG:ddi:DDB_G0285843 InParanoid:Q54MH4
ProtClustDB:CLSZ2846702 Uniprot:Q54MH4
Length = 1387
Score = 458 (166.3 bits), Expect = 6.3e-67, Sum P(2) = 6.3e-67
Identities = 129/432 (29%), Positives = 218/432 (50%)
Query: 531 WSAEQIDLGLVESTIEYICR-H--EGDGAILVFLTGWNDISKLLDQIKVN-KFLGDPNKF 586
WS + V+S ++ I H +G G ILVF+TG DI ++ K LG
Sbjct: 842 WSKTPCE-DYVDSAVKQILSIHVTQGVGDILVFMTGQEDIETTCATVEERIKQLGPQAPP 900
Query: 587 L-VLPLHGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYD 645
L +LP++ +P+ Q +IF++ RK ++ATNIAE+S+T+D ++YV+D G K Y+
Sbjct: 901 LTLLPIYSQLPSDMQAKIFEKADNGSRKCIIATNIAETSLTVDGILYVIDTGYCKLKVYN 960
Query: 646 ALNKLACLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHD-AMLPYQLPEILRTPLQ 704
+ L + ISKA+A+QR GRAGR PG CY+LY ++ +PEI RT L
Sbjct: 961 PRVGMDSLQVTPISKANANQRSGRAGRTGPGRCYRLYTESAFKYELMDNNIPEIQRTNLG 1020
Query: 705 ELCLHIKSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLP 764
+ L++KS+ + + F + PP + N++ L +GALDD +TPLG+ + P
Sbjct: 1021 NVVLNLKSMGVKNLLDF--DFMDPPPQDNILNSMYQLWVLGALDDQGQITPLGKRMSEFP 1078
Query: 765 VDPNIGKMLLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHI 824
+DP + KM+++ C +TI + L+ + F P ++E D ++ F SDH+
Sbjct: 1079 LDPPLSKMVIVAEQLGCGQDIVTIVSMLSMPSVFYRPKGAEEESDASREKFFVPE-SDHL 1137
Query: 825 ALLKAFDGYKDAKRNRRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSA 884
LL Y+ K N +C E+++ ++ + ++R Q LD++ +S G +
Sbjct: 1138 TLLHV---YQQWKINNYSSQWCAEHYIHIKAMRKVREVRGQLLDIMVQHDMKVESCGSN- 1193
Query: 885 YNRYSHDLEMVCAILCAGLYPNVVQCKRKGKRAVFYTKEVGQVA-LHPSSVNANQNNFPL 943
+++ + + + + + K G+ + G LHP+S P
Sbjct: 1194 -------WDIIRKAITSSYFHHSAKIKGIGE---YVNMRNGMPCFLHPTSALYGLGYAP- 1242
Query: 944 PYMVYSEMVKTN 955
Y+VY E+V T+
Sbjct: 1243 DYIVYHELVMTS 1254
Score = 314 (115.6 bits), Expect = 6.3e-67, Sum P(2) = 6.3e-67
Identities = 72/197 (36%), Positives = 99/197 (50%)
Query: 272 KAMLSFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADC 331
K + RE LP F + + +K + EN V+++ GETG GKTTQL Q++ E+ S G
Sbjct: 650 KTIKEQREFLPIFGCRNDLMKIIRENNVIIIVGETGSGKTTQLVQYLYEDGYSKF-G--- 705
Query: 332 NIICTQPXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLV 391
I CTQP E LG VGY IR E S +T + + T G+LLR+
Sbjct: 706 KIGCTQPRRVAAVSVAKRVSEEMSVTLGNEVGYSIRFEDCTSNETAIKYMTDGILLRESF 765
Query: 392 EDPDLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGN 451
DP+L S +++DE HER +N D SAT+++ FS +FG+
Sbjct: 766 NDPNLDKYSAIIMDEAHERSLNTDVLFGILKKVMSRRYDMKLIVTSATMDSKKFSMFFGD 825
Query: 452 APTVHIPGLTFPVTDLF 468
P IPG TFPV L+
Sbjct: 826 VPVFTIPGRTFPVDVLW 842
>UNIPROTKB|D6RA70 [details] [associations]
symbol:YTHDC2 "Probable ATP-dependent RNA helicase YTHDC2"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF01424 PROSITE:PS50088
PROSITE:PS51061 PROSITE:PS51194 SMART:SM00248 SMART:SM00490
GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 EMBL:AC093208
EMBL:AC010389 HGNC:HGNC:24721 IPI:IPI00964960
ProteinModelPortal:D6RA70 SMR:D6RA70 Ensembl:ENST00000515883
UCSC:uc010jcf.2 HOGENOM:HOG000205632 ArrayExpress:D6RA70
Bgee:D6RA70 Uniprot:D6RA70
Length = 739
Score = 440 (159.9 bits), Expect = 2.0e-66, Sum P(2) = 2.0e-66
Identities = 88/204 (43%), Positives = 122/204 (59%)
Query: 276 SFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIIC 335
SFR+ LP F+ + E +K + EN+V+++ GETG GKTTQ+PQF+L++ + G C I C
Sbjct: 188 SFRQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCFKN--GIPCRIFC 245
Query: 336 TQPXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVE-DP 394
TQP ER E +G+T+GYQIRLES+ S +T L FCT GVLLR L+ D
Sbjct: 246 TQPRRLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMAGDS 305
Query: 395 DLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGNAPT 454
LS V+H++VDE+HER DF SA ++ +LF +YFG+ P
Sbjct: 306 TLSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPV 365
Query: 455 VHIPGLTFPVTDLFLEDVLEKTRY 478
++I G F V ++FLED+L T Y
Sbjct: 366 IYIQGRPFEVKEMFLEDILRTTGY 389
Score = 314 (115.6 bits), Expect = 2.0e-66, Sum P(2) = 2.0e-66
Identities = 70/164 (42%), Positives = 105/164 (64%)
Query: 513 IDSNYKNYRASTRASLEAW----SAEQIDLGLVESTIEYICRHEGD-GAILVFLTGWNDI 567
+ +N + A R L+A+ E++DL L+ + IC H D GA+L+FL G+++I
Sbjct: 577 VQTNGSDLSAEDRELLKAYHHSFDDEKVDLDLIMHLLYNIC-HSCDAGAVLIFLPGYDEI 635
Query: 568 SKLLDQIKVN--KFLGDPNKFLVLPLHGSMPTINQREIFDRPPPNKRKIVLATNIAESSI 625
L D+I + +F +++ V LH +M T +Q+++ PP RKI+L+TNIAE+SI
Sbjct: 636 VGLRDRILFDDKRFADSTHRYQVFMLHSNMQTSDQKKVLKNPPAGVRKIILSTNIAETSI 695
Query: 626 TIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASAHQRRGR 669
T++DVV+V+D GK KE S+DALN + L WISKASA QR+GR
Sbjct: 696 TVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGR 739
Score = 156 (60.0 bits), Expect = 1.5e-35, Sum P(2) = 1.5e-35
Identities = 50/197 (25%), Positives = 91/197 (46%)
Query: 125 LEQMKRGEEQEMIIKRKFSRADQQTLADMAHQLGLHFHAYNKGKALAVSKVPLPMYRPDL 184
LE+ + G+++EM + ++ + ++ LGL +K K ++ L + + D
Sbjct: 53 LERFRYGDQREMEFPSSLTSTERAFIHRLSQSLGL----VSKSKGKGANRY-LTVKKKD- 106
Query: 185 DERHGSTEKELQMSIETERRVGNLLNSSQGNVPVNDSGIESSEVARRPKLSVKVANTISP 244
GS M+ + + S PV + E +E+ + + A
Sbjct: 107 ----GSETAHAMMTCNLTHNTKHAVRSLIQRFPVTNK--ERTELLPKTERGNVFAVEAEN 160
Query: 245 PQSDSAKERLNVILKERQEKLKSSDSGKAMLSFREKLPAFKMKAEFLKAVAENQVLVVSG 304
+ RLN + + K S+ SFR+ LP F+ + E +K + EN+V+++ G
Sbjct: 161 REMSKTSGRLNNGIPQIPVKRGESEFD----SFRQSLPVFEKQEEIVKIIKENKVVLIVG 216
Query: 305 ETGCGKTTQLPQFILEE 321
ETG GKTTQ+PQF+L++
Sbjct: 217 ETGSGKTTQIPQFLLDD 233
>GENEDB_PFALCIPARUM|PFL1525c [details] [associations]
symbol:PFL1525c "pre-mRNA splicing factor RNA
helicase, putative" species:5833 "Plasmodium falciparum"
[GO:0051726 "regulation of cell cycle" evidence=ISS] [GO:0008380
"RNA splicing" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008380 GO:GO:0005681
GO:GO:0003676 GO:GO:0051726 EMBL:AE014188 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 HOGENOM:HOG000175261 KO:K01509 RefSeq:XP_001350711.1
ProteinModelPortal:Q8I5A4 IntAct:Q8I5A4 MINT:MINT-1581184
PRIDE:Q8I5A4 EnsemblProtists:PFL1525c:mRNA GeneID:811357
KEGG:pfa:PFL1525c EuPathDB:PlasmoDB:PF3D7_1231600
ProtClustDB:CLSZ2514931 Uniprot:Q8I5A4
Length = 1168
Score = 417 (151.9 bits), Expect = 2.1e-66, Sum P(3) = 2.1e-66
Identities = 114/369 (30%), Positives = 187/369 (50%)
Query: 611 KRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRA 670
+RKI+L+TNI E+SITID++VYV+D G K+ Y+ + + L+ SKAS +QR GRA
Sbjct: 802 RRKIILSTNICETSITIDNIVYVIDSGLCKQKIYNPNSGIESLVTLPCSKASVNQRTGRA 861
Query: 671 GRVQPGVCYKLYPRIIHDAMLPYQLPEILRTPLQELCLHIKSLQLGTVGSFLSKALQPPD 730
GR + G C++L+ + + +PEI R + + L +KSL + + +F L PP
Sbjct: 862 GRKRDGKCFRLFTKKSFIDLSDNSIPEIQRCEISSMILLLKSLGMDDIINF--DFLDPPS 919
Query: 731 PLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGKMLLMGAI-FQCLNPALTIA 789
P+ + +ELL ++GAL+D NLT GR + P D KM+L A + C++ L +A
Sbjct: 920 PIVIIKGLELLYSLGALNDEGNLTRTGRKMAEFPTDVKSSKMILSAAEKYNCVDEILNVA 979
Query: 790 AALAHRNP-FVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAKRNRRERDFCWE 848
+ L H N F + +KE + K+ F + D + L YK + N FC++
Sbjct: 980 SMLTHANNIFYVQKGKEKEAENIKKMFIIEGGGDFLLFLNI---YKQCEENNFSTSFCYD 1036
Query: 849 NFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYSHDLEMVCAILCAGLYPNVV 908
+FL TL ++D+++Q L + I + G N S + + + + + N
Sbjct: 1037 HFLQYHTLIKVKDVKTQLLSICEKIDIPITTCGIE--NHES--INNIKKSIVSAFFTNAA 1092
Query: 909 QCKRKGKRAVFYTKEVGQVALHPSSV----NANQNNFPLPYMVYSEMVKTNNINVYDSTN 964
K + + +V V+++P+SV N + N + + Y E++K N Y N
Sbjct: 1093 LPVNKTELKIIKLNQV--VSIYPNSVLFKKNIMEENENVCIIFY-EVIKLNKS--YIRHN 1147
Query: 965 ISEYALLLF 973
I LLF
Sbjct: 1148 IPVNKNLLF 1156
Score = 318 (117.0 bits), Expect = 2.1e-66, Sum P(3) = 2.1e-66
Identities = 84/288 (29%), Positives = 147/288 (51%)
Query: 183 DLDE-RHGSTEKELQMSIETERRV-GNLLNSSQGNVPVNDSGIESSEVARRPKLSVKVAN 240
D D+ +H +K+ + + ER V N + + +N++G+ ++V V + +
Sbjct: 349 DSDKIKHEKKKKKKSIMTDEERNVDSNKRSFEKKESELNENGL--TDVVE----FVHLES 402
Query: 241 TISPPQSDSAKERLNVILKERQEKLKSSDSGKAMLSFREKLPAFKMKAEFLKAVAENQVL 300
+ + E+L +K+R+EK K ++ R++LP + + + LKA+ N++L
Sbjct: 403 FYGMNEKEKELEKLFEDIKKRKEKKM-----KKIIDERKRLPIYSYRYDILKAIKNNKIL 457
Query: 301 VVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQPXXXXXXXXXXXXXXERGENLGE 360
++ GETG GK+TQL Q++ E + + G NIICTQP E +G+
Sbjct: 458 ILVGETGSGKSTQLTQYLYECKYH-MYG---NIICTQPRRIACIAIANRVAEEMNVKIGK 513
Query: 361 TVGYQIRLESKRSAQTRLLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFXXXX 420
VGY IR ++K S T++++ T G+ LR L+ +P L +S L++DE HER ++ D
Sbjct: 514 EVGYVIRFQNKTSEATKIMYMTDGMFLRLLLYNPTLEDISVLIIDEAHERALHTDVILPI 573
Query: 421 XXXXXXXXXXXXXXXMSATINADLFSKYFGNAPTVHIPGLTFPVTDLF 468
SAT++A+ S YF AP ++PG + V D++
Sbjct: 574 VKDICNFRENIRVVISSATLDAEKISTYFNCAPIFYVPGRKYNV-DIY 620
Score = 80 (33.2 bits), Expect = 2.1e-66, Sum P(3) = 2.1e-66
Identities = 21/64 (32%), Positives = 34/64 (53%)
Query: 544 TIEYICRHEGDGAILVFLTGWNDISKLLDQI--KVNKFLGDPNKFLVLPLHGSMPTINQR 601
TI I +G G ILVFL G +I + ++ K+N+ ++LP++ S+P Q
Sbjct: 636 TILQIHITQGKGDILVFLPGQYEIELVQQELENKLNELAPKYRNLVILPIYSSLPVEYQA 695
Query: 602 EIFD 605
IF+
Sbjct: 696 RIFE 699
Score = 55 (24.4 bits), Expect = 1.1e-24, Sum P(2) = 1.1e-24
Identities = 14/51 (27%), Positives = 26/51 (50%)
Query: 794 HRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAKRNRRERD 844
+RN +LP+ V+ R F + D++ L+ + KD +RN+ +D
Sbjct: 677 YRNLVILPIYSSLPVEYQARIFEDVTEEDNMKFLEDINDKKD-ERNKNHKD 726
Score = 39 (18.8 bits), Expect = 2.8e-37, Sum P(3) = 2.8e-37
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 497 QDSKKDHLTALFEDVDIDSNYKNY 520
QD K+ T +E+ +D + NY
Sbjct: 138 QDIDKNKKTQTYENDKVDKSLYNY 161
>UNIPROTKB|Q8I5A4 [details] [associations]
symbol:PFL1525c "Pre-mRNA splicing factor RNA helicase,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0008380 "RNA splicing"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0008380 GO:GO:0005681 GO:GO:0003676
GO:GO:0051726 EMBL:AE014188 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 KO:K01509 RefSeq:XP_001350711.1
ProteinModelPortal:Q8I5A4 IntAct:Q8I5A4 MINT:MINT-1581184
PRIDE:Q8I5A4 EnsemblProtists:PFL1525c:mRNA GeneID:811357
KEGG:pfa:PFL1525c EuPathDB:PlasmoDB:PF3D7_1231600
ProtClustDB:CLSZ2514931 Uniprot:Q8I5A4
Length = 1168
Score = 417 (151.9 bits), Expect = 2.1e-66, Sum P(3) = 2.1e-66
Identities = 114/369 (30%), Positives = 187/369 (50%)
Query: 611 KRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRA 670
+RKI+L+TNI E+SITID++VYV+D G K+ Y+ + + L+ SKAS +QR GRA
Sbjct: 802 RRKIILSTNICETSITIDNIVYVIDSGLCKQKIYNPNSGIESLVTLPCSKASVNQRTGRA 861
Query: 671 GRVQPGVCYKLYPRIIHDAMLPYQLPEILRTPLQELCLHIKSLQLGTVGSFLSKALQPPD 730
GR + G C++L+ + + +PEI R + + L +KSL + + +F L PP
Sbjct: 862 GRKRDGKCFRLFTKKSFIDLSDNSIPEIQRCEISSMILLLKSLGMDDIINF--DFLDPPS 919
Query: 731 PLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGKMLLMGAI-FQCLNPALTIA 789
P+ + +ELL ++GAL+D NLT GR + P D KM+L A + C++ L +A
Sbjct: 920 PIVIIKGLELLYSLGALNDEGNLTRTGRKMAEFPTDVKSSKMILSAAEKYNCVDEILNVA 979
Query: 790 AALAHRNP-FVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAKRNRRERDFCWE 848
+ L H N F + +KE + K+ F + D + L YK + N FC++
Sbjct: 980 SMLTHANNIFYVQKGKEKEAENIKKMFIIEGGGDFLLFLNI---YKQCEENNFSTSFCYD 1036
Query: 849 NFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYSHDLEMVCAILCAGLYPNVV 908
+FL TL ++D+++Q L + I + G N S + + + + + N
Sbjct: 1037 HFLQYHTLIKVKDVKTQLLSICEKIDIPITTCGIE--NHES--INNIKKSIVSAFFTNAA 1092
Query: 909 QCKRKGKRAVFYTKEVGQVALHPSSV----NANQNNFPLPYMVYSEMVKTNNINVYDSTN 964
K + + +V V+++P+SV N + N + + Y E++K N Y N
Sbjct: 1093 LPVNKTELKIIKLNQV--VSIYPNSVLFKKNIMEENENVCIIFY-EVIKLNKS--YIRHN 1147
Query: 965 ISEYALLLF 973
I LLF
Sbjct: 1148 IPVNKNLLF 1156
Score = 318 (117.0 bits), Expect = 2.1e-66, Sum P(3) = 2.1e-66
Identities = 84/288 (29%), Positives = 147/288 (51%)
Query: 183 DLDE-RHGSTEKELQMSIETERRV-GNLLNSSQGNVPVNDSGIESSEVARRPKLSVKVAN 240
D D+ +H +K+ + + ER V N + + +N++G+ ++V V + +
Sbjct: 349 DSDKIKHEKKKKKKSIMTDEERNVDSNKRSFEKKESELNENGL--TDVVE----FVHLES 402
Query: 241 TISPPQSDSAKERLNVILKERQEKLKSSDSGKAMLSFREKLPAFKMKAEFLKAVAENQVL 300
+ + E+L +K+R+EK K ++ R++LP + + + LKA+ N++L
Sbjct: 403 FYGMNEKEKELEKLFEDIKKRKEKKM-----KKIIDERKRLPIYSYRYDILKAIKNNKIL 457
Query: 301 VVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQPXXXXXXXXXXXXXXERGENLGE 360
++ GETG GK+TQL Q++ E + + G NIICTQP E +G+
Sbjct: 458 ILVGETGSGKSTQLTQYLYECKYH-MYG---NIICTQPRRIACIAIANRVAEEMNVKIGK 513
Query: 361 TVGYQIRLESKRSAQTRLLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFXXXX 420
VGY IR ++K S T++++ T G+ LR L+ +P L +S L++DE HER ++ D
Sbjct: 514 EVGYVIRFQNKTSEATKIMYMTDGMFLRLLLYNPTLEDISVLIIDEAHERALHTDVILPI 573
Query: 421 XXXXXXXXXXXXXXXMSATINADLFSKYFGNAPTVHIPGLTFPVTDLF 468
SAT++A+ S YF AP ++PG + V D++
Sbjct: 574 VKDICNFRENIRVVISSATLDAEKISTYFNCAPIFYVPGRKYNV-DIY 620
Score = 80 (33.2 bits), Expect = 2.1e-66, Sum P(3) = 2.1e-66
Identities = 21/64 (32%), Positives = 34/64 (53%)
Query: 544 TIEYICRHEGDGAILVFLTGWNDISKLLDQI--KVNKFLGDPNKFLVLPLHGSMPTINQR 601
TI I +G G ILVFL G +I + ++ K+N+ ++LP++ S+P Q
Sbjct: 636 TILQIHITQGKGDILVFLPGQYEIELVQQELENKLNELAPKYRNLVILPIYSSLPVEYQA 695
Query: 602 EIFD 605
IF+
Sbjct: 696 RIFE 699
Score = 55 (24.4 bits), Expect = 1.1e-24, Sum P(2) = 1.1e-24
Identities = 14/51 (27%), Positives = 26/51 (50%)
Query: 794 HRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAKRNRRERD 844
+RN +LP+ V+ R F + D++ L+ + KD +RN+ +D
Sbjct: 677 YRNLVILPIYSSLPVEYQARIFEDVTEEDNMKFLEDINDKKD-ERNKNHKD 726
Score = 39 (18.8 bits), Expect = 2.8e-37, Sum P(3) = 2.8e-37
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 497 QDSKKDHLTALFEDVDIDSNYKNY 520
QD K+ T +E+ +D + NY
Sbjct: 138 QDIDKNKKTQTYENDKVDKSLYNY 161
>UNIPROTKB|Q9H6R0 [details] [associations]
symbol:DHX33 "Putative ATP-dependent RNA helicase DHX33"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IEA]
[GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005654 "nucleoplasm" evidence=IDA] [GO:0000182
"rDNA binding" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:CH471108 GO:GO:0005654
GO:GO:0005730 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0000182 GO:GO:0045943 HOVERGEN:HBG039428
EMBL:AK025625 EMBL:AK026944 EMBL:AK295074 EMBL:AC004148
EMBL:BC030017 EMBL:CR936655 IPI:IPI00302860 IPI:IPI00655950
RefSeq:NP_001186628.1 RefSeq:NP_064547.2 UniGene:Hs.250456
ProteinModelPortal:Q9H6R0 SMR:Q9H6R0 IntAct:Q9H6R0
PhosphoSite:Q9H6R0 DMDM:296434478 PRIDE:Q9H6R0
Ensembl:ENST00000225296 GeneID:56919 KEGG:hsa:56919 UCSC:uc002gbz.3
CTD:56919 GeneCards:GC17M005360 HGNC:HGNC:16718 MIM:614405
neXtProt:NX_Q9H6R0 PharmGKB:PA27220 InParanoid:Q9H6R0 OMA:APDYFRR
OrthoDB:EOG46Q6S1 PhylomeDB:Q9H6R0 ChiTaRS:DHX33 GenomeRNAi:56919
NextBio:62420 ArrayExpress:Q9H6R0 Bgee:Q9H6R0 CleanEx:HS_DHX33
Genevestigator:Q9H6R0 GermOnline:ENSG00000005100 Uniprot:Q9H6R0
Length = 707
Score = 486 (176.1 bits), Expect = 2.9e-66, Sum P(2) = 2.9e-66
Identities = 135/410 (32%), Positives = 207/410 (50%)
Query: 557 ILVFLTGWNDISKLLDQIK-VNKFLGDP-NKFLVLPLHGSMPTINQREIFDRPPPNKRKI 614
ILVFLTG +I + + + K L D LVLPL+ S+P Q +F P RK+
Sbjct: 291 ILVFLTGQEEIEAMSKTCRDIAKHLPDGCPAMLVLPLYASLPYAQQLRVFQGAPKGYRKV 350
Query: 615 VLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQ 674
+++TNIAE+SITI + YVVD G K Y+ + L L +SK A QR GRAGR
Sbjct: 351 IISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRTGRAGRED 410
Query: 675 PGVCYKLYPRIIHDAMLPYQLPEILRTPLQELCLHIKSLQLGTVGSFLSKALQPPDPLAV 734
G+CY+LY + +PEI R L + L + ++++ V +F + P P +
Sbjct: 411 SGICYRLYTEDEFEKFDKMTVPEIQRCNLASVMLQLLAMKVPNVLTF--DFMSKPSPDHI 468
Query: 735 QNAIELLKTIGAL---DDMENLTPLGRHLCTLPVDPNIGKMLLMGAIFQCLNPALTIAAA 791
Q AI L +GAL DD LTP+GR + P++P K +LM F C LTI +
Sbjct: 469 QAAIAQLDLLGALEHKDDQLTLTPMGRKMAAFPLEPKFAKTILMSPKFHCTEEILTIVSL 528
Query: 792 LAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAKRNRRERDFCWENFL 851
L+ + P + ++EV ++ F DH+ LL + +K+ N+ D+C ENF+
Sbjct: 529 LSVDSVLHNPPSRREEVQGVRKKFISSE-GDHMTLLNIYRTFKNLGGNK---DWCKENFV 584
Query: 852 SPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYSHDLEMVCAILCAGLYPNVVQCK 911
+ + ++ ++R+Q D+ K P A +R D+E V L L+ + + +
Sbjct: 585 NSKNMTLVAEVRAQLRDICL------KMSMPIASSR--GDVESVRRCLAHSLFMSTAELQ 636
Query: 912 RKGKRAVFYTKEVGQVALHPSSVNANQNNFPLPYMVYSEMVKTNNINVYD 961
G A T + VA+HPSSV + P +VY+E++ TN + D
Sbjct: 637 PDGTYATTDTHQ--PVAIHPSSVLFHCK--PA-CVVYTELLYTNKCYMRD 681
Score = 256 (95.2 bits), Expect = 2.9e-66, Sum P(2) = 2.9e-66
Identities = 63/192 (32%), Positives = 93/192 (48%)
Query: 278 REKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQ 337
R LP F+ + + L + V+ GETG GKTTQ+PQ++ E +S +G I TQ
Sbjct: 71 RRSLPIFQARGQLLAQLRNLDNAVLIGETGSGKTTQIPQYLYEGGISR-QGI---IAVTQ 126
Query: 338 PXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVEDPDLS 397
P E+ LG+ VGY +R + S TR+ F T G+LLR+ + D L
Sbjct: 127 PRRVAAISLATRVSDEKRTELGKLVGYTVRFDDVTSEDTRIKFLTDGMLLREAISDSLLR 186
Query: 398 CVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXX-----XMSATINADLFSKYFGNA 452
S +++DE HER ++ D MSAT++ DLFS+YF A
Sbjct: 187 KYSCVILDEAHERTIHTDVLFGVVKAAQKRRKELGKLPLKVIVMSATMDVDLFSQYFNGA 246
Query: 453 PTVHIPGLTFPV 464
P +++ G P+
Sbjct: 247 PVLYLEGRQHPI 258
Score = 37 (18.1 bits), Expect = 8.0e-17, Sum P(2) = 8.0e-17
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 918 VFYTKEVGQVALHPSSVNANQ 938
VFYTK+ LH + V+ Q
Sbjct: 260 VFYTKQPQNDYLHAALVSVFQ 280
>ZFIN|ZDB-GENE-070410-11 [details] [associations]
symbol:zgc:158828 "zgc:158828" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 ZFIN:ZDB-GENE-070410-11
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HOVERGEN:HBG039428 OrthoDB:EOG4V9TQ5
EMBL:BC117646 IPI:IPI00851766 UniGene:Dr.86097 Uniprot:Q1ECW4
Length = 691
Score = 490 (177.5 bits), Expect = 4.6e-66, Sum P(2) = 4.6e-66
Identities = 128/402 (31%), Positives = 206/402 (51%)
Query: 541 VESTIEYICR-HE--GDGAILVFLTGWNDISKLL----DQIKVNKFLGDPNKFLVLPLHG 593
V++T+E + + HE DG +L FLTG ++ K++ +Q + G VLP++
Sbjct: 248 VKATVETVLKIHETEDDGDVLAFLTGQEEVEKVVSLLQEQARTLSRYGMKKHLCVLPMYA 307
Query: 594 SMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACL 653
+P Q +F+R P RK+V+ATNIAE+SITI+ VV+V+DC K +Y+ + L
Sbjct: 308 GLPYNEQMRVFERMAPTVRKVVVATNIAETSITINGVVFVIDCAFVKIRAYNPRTAIESL 367
Query: 654 LPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQLPEILRTPLQELCLHIKSL 713
+ + ISKASA QR GRAGR + G C++LY + + +PE+ R+ L + L +K+L
Sbjct: 368 IVTPISKASACQRAGRAGRNRAGKCFRLYTEEDFEKLPESTVPEMQRSNLAPVILQLKAL 427
Query: 714 QLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLT-PLGRHLCTLPVDPNIGKM 772
+ V F L PP ++ A+ELL +G LD LT P+G + P+ P KM
Sbjct: 428 GIDNVLRF--SFLSPPPAQSMVQALELLFALGGLDQYGRLTDPMGVRMAEFPLSPMFAKM 485
Query: 773 LLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDG 832
LL F C +TIAA + +N FV P N +K R FA DH+ +L ++
Sbjct: 486 LLESGNFGCSKEIVTIAAMMQIQNIFVAPHNQRKSAAREHRKFAVAE-GDHLTMLNVYEA 544
Query: 833 YKDAKRNRRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYSHDL 892
+ ++++ +C ++FL+ L +R Q LL+ K K P + D+
Sbjct: 545 FI---KHQKSSQWCQDHFLNYKGLLRATAVREQLRHLLN------KFKVPRTSSEGDPDV 595
Query: 893 EMVCAILCAGLYPNVVQCKRKGKRAVFYTKEVGQVALHPSSV 934
+ C + +G + N + G ++ ++ +HP SV
Sbjct: 596 ILRCIV--SGFFANAARMHHSGSYRTL--RDDRELYIHPDSV 633
Score = 245 (91.3 bits), Expect = 4.6e-66, Sum P(2) = 4.6e-66
Identities = 68/202 (33%), Positives = 97/202 (48%)
Query: 278 REKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQ 337
R++LP FK + L V Q +V+ GETG GK+TQ+PQ++LE ++ G + TQ
Sbjct: 41 RQRLPVFKHRNNILYLVESFQTVVIVGETGSGKSTQIPQYLLEAGWAA-EGKVIGV--TQ 97
Query: 338 PXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQ-TRLLFCTTGVLLRQLVEDPDL 396
P ERG LG VGY IR + TR+ F T G+L+R+++ DP L
Sbjct: 98 PRRVAATSVATRVAEERGAFLGHEVGYTIRFDDCSDPHATRIKFLTDGMLVREMMSDPLL 157
Query: 397 SCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYF-----GN 451
S L++DE HER + D SAT++A F +F G+
Sbjct: 158 KKYSVLILDEAHERTLYTDIAIGLLKKILKKRRDLRLIVASATLDAKKFQDFFNLNESGD 217
Query: 452 APT-----VHIPGLTFPVTDLF 468
A + + G TFPV D+F
Sbjct: 218 ASKDTCGILTVEGRTFPV-DIF 238
>UNIPROTKB|E1BYA5 [details] [associations]
symbol:DHX33 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000182 "rDNA binding"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0033613 "activating transcription
factor binding" evidence=IEA] [GO:0045943 "positive regulation of
transcription from RNA polymerase I promoter" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005654 GO:GO:0005730 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AADN02025994
IPI:IPI00823199 Ensembl:ENSGALT00000002492 ArrayExpress:E1BYA5
Uniprot:E1BYA5
Length = 660
Score = 472 (171.2 bits), Expect = 5.1e-66, Sum P(2) = 5.1e-66
Identities = 130/414 (31%), Positives = 208/414 (50%)
Query: 557 ILVFLTGWNDISKLLDQIK-VNKFLGDP-NKFLVLPLHGSMPTINQREIFDRPPPNKRKI 614
ILVFLTG +I + + + K L D + V+PL+ S+P Q +F P RK+
Sbjct: 241 ILVFLTGQEEIEAMTKTCRDIAKHLPDGCPQMTVMPLYASLPYSQQLRVFQAAPKGCRKV 300
Query: 615 VLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQ 674
+L+TNIAE+SITI + YVVD G K Y+ L L +SKA A QR GRAGR
Sbjct: 301 ILSTNIAETSITISGIKYVVDTGMVKAKKYNPEIGLEVLAVQRVSKAQAWQRTGRAGRED 360
Query: 675 PGVCYKLYPRIIHDAMLPYQLPEI---LRTPLQELCLHIKSLQLGTVGSFLSKALQPPDP 731
G+CY+LY + +PEI R L + L + +L++ + +F + P P
Sbjct: 361 SGICYRLYTEDEFEKFDKMTVPEIQSLCRCNLASVLLQLLALRIPNILTF--DFMSKPSP 418
Query: 732 LAVQNAIELLKTIGALDDMEN---LTPLGRHLCTLPVDPNIGKMLLMGAIFQCLNPALTI 788
A+Q AIE L +GA++ E+ LTPLGR + P++P K +L+ F C LTI
Sbjct: 419 DAIQAAIEQLDLLGAVEQKEDQLVLTPLGRKMAAFPLEPKFSKTILLSPKFHCTEEILTI 478
Query: 789 AAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAKRNRRERDFCWE 848
+ L+ + P + EV ++ F DH+ LL + +K+ N+ ++C E
Sbjct: 479 VSLLSVDSVLYNPPARRDEVQSVRKKFISSE-GDHLTLLNVYRAFKNVSGNK---EWCKE 534
Query: 849 NFLSPITLQMMEDMRSQFLDLLSDIGF-VDKSKGPSAYNRYSHDLEMVCAILCAGLYPNV 907
NF++ + ++ D+R+Q D+ + ++ S+ +A R C L L+ N
Sbjct: 535 NFVNGRNMMLVSDVRAQLRDICVKLSMPMESSRSDTANIRR-------C--LAHSLFMNA 585
Query: 908 VQCKRKGKRAVFYTKEVGQVALHPSSVNANQNNFPLPYMVYSEMVKTNNINVYD 961
+ + G + + ++ VA+HPSSV + P +VY+ ++ TN + D
Sbjct: 586 AELQPDGTYSTVNSHQL--VAIHPSSVLFHCK--P-SCVVYNGLLHTNKCYMRD 634
Score = 261 (96.9 bits), Expect = 5.1e-66, Sum P(2) = 5.1e-66
Identities = 68/228 (29%), Positives = 106/228 (46%)
Query: 276 SFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIIC 335
S R +LP F+ + L + + V+ GETG GKTTQ+PQ++ E + G I
Sbjct: 19 SQRRELPIFQARGPLLSQLRGLECAVLIGETGSGKTTQIPQYLYEAGI----GRQGIIAV 74
Query: 336 TQPXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVEDPD 395
TQP E+ LG+ VGY +R + S +TR+ F T G+LLR+ + DP
Sbjct: 75 TQPRRVAAISLATRVSDEKRTELGKLVGYTVRFDDLTSDETRIKFLTDGMLLREAIGDPI 134
Query: 396 LSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXX-----XMSATINADLFSKYFG 450
L S +++DE HER ++ D MSAT++ D FS+YF
Sbjct: 135 LRKYSVVILDEAHERTIHTDVLFGVVKAAQKKRKELGKLPLKVIVMSATMDVDQFSQYFN 194
Query: 451 NAPTVHIPGLTFPVTDLFLEDVLEKTRYKMNSKLDSFQGNXXXXXXQD 498
AP +++ G P+ + + ++ Y + + FQ + QD
Sbjct: 195 GAPVLYLEGRQHPIQVFYTKQ--PQSDYLQAALVSVFQIHQEAPSSQD 240
>MGI|MGI:1921941 [details] [associations]
symbol:Tdrd9 "tudor domain containing 9" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0007126 "meiosis" evidence=IEA] [GO:0007140 "male meiosis"
evidence=IMP] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IMP]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0009566 "fertilization" evidence=IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
[GO:0034587 "piRNA metabolic process" evidence=IMP] [GO:0043046
"DNA methylation involved in gamete generation" evidence=IMP]
[GO:0071547 "piP-body" evidence=IDA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
InterPro:IPR002999 MGI:MGI:1921941 GO:GO:0007275 GO:GO:0005524
GO:GO:0005634 GO:GO:0030154 GO:GO:0009566 GO:GO:0007283
GO:GO:0003676 GO:GO:0031047 GO:GO:0007140 Pfam:PF00567
SMART:SM00333 PROSITE:PS50304 GO:GO:0043046 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0034587 eggNOG:COG1643
GeneTree:ENSGT00700000104393 GO:GO:0008026 GO:GO:0071547
EMBL:AC112520 OMA:INDWFTI CTD:122402 OrthoDB:EOG4F4S96
EMBL:AB362563 EMBL:AC132623 EMBL:BC115831 EMBL:BC116656
IPI:IPI00749982 IPI:IPI00849630 IPI:IPI00914159 RefSeq:NP_083332.1
UniGene:Mm.60648 ProteinModelPortal:Q14BI7 SMR:Q14BI7 STRING:Q14BI7
PhosphoSite:Q14BI7 PaxDb:Q14BI7 PRIDE:Q14BI7
Ensembl:ENSMUST00000079009 GeneID:74691 KEGG:mmu:74691
UCSC:uc007pei.1 UCSC:uc007pej.1 UCSC:uc011yva.1
HOGENOM:HOG000047965 HOVERGEN:HBG072266 InParanoid:B1Q3J8
NextBio:341402 Bgee:Q14BI7 Genevestigator:Q14BI7 Uniprot:Q14BI7
Length = 1383
Score = 480 (174.0 bits), Expect = 6.9e-66, Sum P(2) = 6.9e-66
Identities = 124/342 (36%), Positives = 185/342 (54%)
Query: 556 AILVFLTGWNDISKLLDQIKVNKFLGDPNKFLVLPLHGSMPTINQREIFDRPPPNKRKIV 615
++LVFL G +I+ + ++ N + V PLH S+ Q +F P P RKI+
Sbjct: 388 SVLVFLPGLGEIN-YMHELLTNMI---HKRLQVYPLHSSVTLEEQNNVFLSPVPGYRKII 443
Query: 616 LATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQP 675
L+TNIAESS+T+ DV YV+D + D L SW SK S QR+GRAGRV
Sbjct: 444 LSTNIAESSVTVPDVKYVIDFCLTRTLVCDEDTNYQSLRLSWASKTSCDQRKGRAGRVSK 503
Query: 676 GVCYKLYPRIIHDAMLP-YQLPEILRTPLQELCLHIKSLQLGTVGSFLSKALQPPDPLAV 734
G CY+L PR D+ +P + +PE+LR PL L +K L +G + L+ AL PP +
Sbjct: 504 GYCYRLIPRDFWDSAIPDHVVPEMLRCPLGSTILKVKLLDMGEPRALLATALSPPSLSDI 563
Query: 735 QNAIELLKTIGALD-----DMEN-----LTPLGRHLCTLPVDPNIGKMLLMGAIFQCLNP 784
+ I LLK +GAL + EN LT LGR L LPV +GK++++G +F CL+
Sbjct: 564 ERTILLLKEVGALAVSGQREDENPHDGELTFLGRVLAQLPVSQQLGKLVVLGHVFGCLDE 623
Query: 785 ALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAKRN---RR 841
L IAAAL+ +N F +P + K F+G S SD +AL++AF ++ ++ RR
Sbjct: 624 CLIIAAALSLKNFFTMPFRQHLDGYRNKVHFSGSSRSDCLALVEAFRAWQACRQRGELRR 683
Query: 842 ERD-FCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGP 882
+D W L+ I ++ + ++ + +L + I + GP
Sbjct: 684 PKDELDWGR-LNYIQIKRIREVAELYEELKNRISQFNMFVGP 724
Score = 281 (104.0 bits), Expect = 6.9e-66, Sum P(2) = 6.9e-66
Identities = 63/170 (37%), Positives = 86/170 (50%)
Query: 281 LPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQPXX 340
LP + K E + + N V+++ G TG GK+TQLPQ++L+ R A CNI+ TQP
Sbjct: 134 LPINRCKEEVISLIESNSVVIIHGATGSGKSTQLPQYVLDHYTQ--RSAFCNIVVTQPRK 191
Query: 341 XXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVEDPDLSCVS 400
ER LG VGYQ+ LE + TRL++ TTGVLL+++V L +
Sbjct: 192 IGASSIARWISKERSWTLGGLVGYQVGLEKIATEDTRLIYMTTGVLLQKIVSAKSLMEFT 251
Query: 401 HLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXX-MSATINADLFSKYF 449
H+ +DE+HER DF MSATIN F+ YF
Sbjct: 252 HIFIDEVHERTEEMDFLLLVVRKLLRTNSRFVKVVLMSATINCKQFADYF 301
Score = 37 (18.1 bits), Expect = 1.4e-18, Sum P(2) = 1.4e-18
Identities = 8/32 (25%), Positives = 17/32 (53%)
Query: 915 KRAVFYTKEVGQVALHPSSVNANQNNFPLPYM 946
+R + KEVG +A+ + N ++ L ++
Sbjct: 564 ERTILLLKEVGALAVSGQREDENPHDGELTFL 595
>FB|FBgn0026713 [details] [associations]
symbol:l(1)G0007 "lethal (1) G0007" species:7227 "Drosophila
melanogaster" [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0002121 "inter-male
aggressive behavior" evidence=IMP] [GO:0007476 "imaginal
disc-derived wing morphogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014298 GO:GO:0005681 GO:GO:0003676 GO:GO:0002121
GO:GO:0007476 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
GO:GO:0000381 KO:K12815 GeneTree:ENSGT00700000104877 OMA:PSRSTWE
UniGene:Dm.4249 GeneID:32373 KEGG:dme:Dmel_CG32604
FlyBase:FBgn0026713 ChiTaRS:l(1)G0007 GenomeRNAi:32373
NextBio:778160 EMBL:AY058553 RefSeq:NP_572947.1 SMR:Q9VY54
MINT:MINT-334469 STRING:Q9VY54 EnsemblMetazoa:FBtr0073900
UCSC:CG32604-RA InParanoid:Q9VY54 Uniprot:Q9VY54
Length = 1222
Score = 423 (154.0 bits), Expect = 8.4e-66, Sum P(2) = 8.4e-66
Identities = 127/431 (29%), Positives = 204/431 (47%)
Query: 547 YICRHEGDGAILVFLTGWNDISKLLDQIKVNKFLGDPNKFL-VLPLHGSMPTINQREIFD 605
++ +EGD +L+F+ G DI + ++ D L +LP++ +P+ Q +IF
Sbjct: 737 HLTPNEGD--MLIFMPGQEDIEVTCEVLEERLAEIDNAPALSILPIYSQLPSDLQAKIFQ 794
Query: 606 RPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASAHQ 665
+ RK V+ATNIAE+S+T+D ++YV+D G K Y+ + L IS+A+A+Q
Sbjct: 795 KSSDGLRKCVVATNIAETSLTVDGIIYVIDSGYCKLKVYNPRIGMDALQIYPISQANANQ 854
Query: 666 RRGRAGRVQPGVCYKLYP-RIIHDAMLPYQLPEILRTPLQELCLHIKSLQLGTVGSFLSK 724
R GRAGR PG Y+LY R D +L +PEI RT L L +KSL G V
Sbjct: 855 RSGRAGRTGPGQAYRLYTQRQYKDELLALTVPEIQRTNLANTVLLLKSL--GVVDLLQFH 912
Query: 725 ALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGKMLLMGAIFQCLNP 784
+ PP + N++ L +GALD LT LGR + P+DP +ML++ C
Sbjct: 913 FMDPPPQDNILNSLYQLWILGALDHTGALTTLGRQMAEFPLDPPQCQMLIVACRMGCSAE 972
Query: 785 ALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAKRNRRERD 844
L I + L+ + F P + E D + F SDH+ L Y+ ++N
Sbjct: 973 VLIIVSMLSVPSIFYRPKGREDEADGVREKFQRPE-SDHLTYLNV---YQQWRQNNYSST 1028
Query: 845 FCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYSHDLEMVCAILCAGLY 904
+C E+F+ ++ + ++R Q D+++ S G D ++V +C+ +
Sbjct: 1029 WCNEHFIHIKAMRKVREVRQQLKDIMTQQNLSVISCGI--------DWDIVRKCICSAYF 1080
Query: 905 PNVVQCKRKGKRAVFYTKEVGQVA-LHPSSVNANQNNFPLPYMVYSEMVKTNNINVYDST 963
+ K G+ + G LHP+S P Y+VY E++ T + +T
Sbjct: 1081 YQAARLKGIGE---YVNLRTGMPCHLHPTSALYGLGTTP-DYVVYHELIMTAKEYMQCAT 1136
Query: 964 NISEYALLLFG 974
+ Y L G
Sbjct: 1137 AVDGYWLAELG 1147
Score = 338 (124.0 bits), Expect = 8.4e-66, Sum P(2) = 8.4e-66
Identities = 78/210 (37%), Positives = 109/210 (51%)
Query: 266 KSSDSGKAMLSFREK-LPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELS 324
KS S K +S + + LP F + E L + EN V+++ GETG GKTTQL Q++ E+ S
Sbjct: 518 KSDFSRKKTISEQRRFLPVFASRQELLNVIRENSVIIIVGETGSGKTTQLTQYLHEDGYS 577
Query: 325 SLRGADCNIICTQPXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLLFCTTG 384
RG I CTQP E LGE VGY IR E S +T + + T G
Sbjct: 578 K-RGM---IGCTQPRRVAAMSVAKRVSDEMDTQLGEDVGYAIRFEDCTSERTVIKYMTDG 633
Query: 385 VLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINADL 444
+LLR+ + DP+L S +++DE HER ++ D SAT+++
Sbjct: 634 ILLRESLRDPELDSYSAIIMDEAHERSLSTDVLFGLLREIVARRHDLKLIVTSATMDSSK 693
Query: 445 FSKYFGNAPTVHIPGLTFPVTDLFLEDVLE 474
F+ +FGN PT IPG TFPV +F ++ E
Sbjct: 694 FATFFGNVPTFTIPGRTFPVDVMFSKNTCE 723
>ZFIN|ZDB-GENE-080507-1 [details] [associations]
symbol:dhx40 "DEAH (Asp-Glu-Ala-His) box polypeptide
40" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-080507-1 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00700000104421
EMBL:CR848791 EMBL:CU861501 IPI:IPI00507978
Ensembl:ENSDART00000101707 Uniprot:E7F7R7
Length = 734
Score = 443 (161.0 bits), Expect = 9.3e-66, Sum P(2) = 9.3e-66
Identities = 134/435 (30%), Positives = 219/435 (50%)
Query: 540 LVESTIEYICRHEGDGAILVFLTGWNDISK----LLDQIKVNKFLGDPNK-----FLVLP 590
+V+ T++ + +E G ILVFLTG ++I K L ++ ++ + D + L+L
Sbjct: 224 VVKMTLD-VHTNEAAGDILVFLTGQSEIEKACDLLFEKAEILDYRYDVHDRSVDGLLILS 282
Query: 591 LHGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKL 650
L+GSMPT QR+IF P RK V+ATNIA +S+TID + Y+VD G K+ ++++ L
Sbjct: 283 LYGSMPTDQQRQIFQPAPKGVRKCVVATNIAATSLTIDGIRYIVDSGFVKQLNHNSRVGL 342
Query: 651 ACLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLP-YQLPEILRTPLQELCLH 709
L ISK+ A QR GRAGR G C+++Y + D +P Y +PEI RT L + L
Sbjct: 343 DILEVVPISKSEAQQRAGRAGRTAAGKCFRIYSKDFWDTCMPEYTIPEIQRTSLTSVILT 402
Query: 710 IKSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNI 769
+K L + V F L P+ + A++ L A+D +T LGR + P+ PN+
Sbjct: 403 LKCLGVHDVIRF--PYLDCPEERFILTALKQLYQYDAIDRRGEVTKLGRLMVEFPLPPNL 460
Query: 770 GKMLLMGAIFQCLNPALTIAAALAHRNPFVLP--VNMQKEVDEAKRSFAGDS--CSDHIA 825
+ LL A C + L +AA L+ N F+ P QKE + + A S +D +
Sbjct: 461 TRALLKAAALGCEDIMLPVAAMLSVENIFIRPGKPEKQKEAEVRHKEIAACSGGSNDFLM 520
Query: 826 LLKAFDGYKDAKRNRRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAY 885
LL F+ + A N +C EN++ ++ + +Q ++L + K + +
Sbjct: 521 LLCVFEKCR-ASENPSA--WCKENWIHWRAVKSAFSVETQLREILLRL----KQQKDFPH 573
Query: 886 NRYSHDL-EMVCAILCAGLYPNVVQCKRKGKRAVFYTKEVGQVALHPSSVNANQNNFPLP 944
R+ E++ LC G + NV + + GK V +HPSS Q L
Sbjct: 574 ERFEGSRSELLRQCLCLGYFTNVAR-RSIGKSFCTMDGHGSSVLIHPSSCLFGQE-LQLD 631
Query: 945 YMVYSEMVKTNNINV 959
++++ +++ T+ + V
Sbjct: 632 WIIFHDVLVTSRVYV 646
Score = 304 (112.1 bits), Expect = 9.3e-66, Sum P(2) = 9.3e-66
Identities = 69/195 (35%), Positives = 100/195 (51%)
Query: 279 EKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQP 338
+KLP ++ K + ++AV EN L+V+GETG GKTTQLPQ++ + LS R + TQP
Sbjct: 16 KKLPIYQYKDKLVQAVEENTFLIVTGETGSGKTTQLPQYLYKAGLS--RNGRIGV--TQP 71
Query: 339 XXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVEDPDLSC 398
E LGE VGYQ+R + + T + + T G LLR+++ DP L+
Sbjct: 72 RRVAAITVAQRVSSEMQVRLGEEVGYQVRFDDCSTKDTMIKYMTDGCLLREILADPSLTQ 131
Query: 399 VSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXX-----XMSATINADLFSKYFGNAP 453
S +++DE HER +N D MSAT+ + S ++GN P
Sbjct: 132 YSIVILDEAHERSLNTDVLLGLLKKTLLKGSRGNKTPLKVVVMSATLETEKLSSFYGNCP 191
Query: 454 TVHIPGLTFPVTDLF 468
IPG T+PV + F
Sbjct: 192 VFTIPGRTYPVKETF 206
>MGI|MGI:2445102 [details] [associations]
symbol:Dhx33 "DEAH (Asp-Glu-Ala-His) box polypeptide 33"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000182 "rDNA binding" evidence=ISO;IDA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=ISO;IDA] [GO:0005730 "nucleolus"
evidence=ISO;IDA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IPI]
[GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=ISO;IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 MGI:MGI:2445102
GO:GO:0005524 GO:GO:0005654 GO:GO:0005730 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 GO:GO:0000182
GO:GO:0045943 HOVERGEN:HBG039428 GeneTree:ENSGT00700000104241
CTD:56919 OMA:APDYFRR ChiTaRS:DHX33 EMBL:AK035177 EMBL:BC052172
IPI:IPI00410764 RefSeq:NP_848144.3 UniGene:Mm.35399
ProteinModelPortal:Q80VY9 SMR:Q80VY9 PhosphoSite:Q80VY9
PRIDE:Q80VY9 Ensembl:ENSMUST00000108527 GeneID:216877
KEGG:mmu:216877 InParanoid:Q80VY9 NextBio:375442 Bgee:Q80VY9
CleanEx:MM_DHX33 Genevestigator:Q80VY9
GermOnline:ENSMUSG00000040620 Uniprot:Q80VY9
Length = 698
Score = 476 (172.6 bits), Expect = 1.6e-65, Sum P(2) = 1.6e-65
Identities = 140/468 (29%), Positives = 229/468 (48%)
Query: 510 DVDIDSNYKN-----YRASTRASLEAWSAEQIDLGLVESTIEYICR-HEGDGA---ILVF 560
DVD+ S Y N Y + ++ + +Q + + + + + H+ A ILVF
Sbjct: 226 DVDLFSQYFNRAPVLYLEGRQHPIQIFYTKQPQQDYLHAALVSVFQIHQEAPASQDILVF 285
Query: 561 LTGWNDISKLLDQIK-VNKFLGD--PNKFLVLPLHGSMPTINQREIFDRPPPNKRKIVLA 617
LTG +I + + + + L D P+ LVLPL+ S+P Q +F P RK++++
Sbjct: 286 LTGQEEIEAMSKTCRDIARHLPDGCPS-MLVLPLYASLPYSQQLRVFQGAPKGYRKVIIS 344
Query: 618 TNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPGV 677
TNIAE+SITI + YVVD G K Y+ + L L +SK A QR GRAGR G+
Sbjct: 345 TNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRTGRAGREDSGI 404
Query: 678 CYKLYPRIIHDAMLPYQLPEILRTPLQELCLHIKSLQLGTVGSFLSKALQPPDPLAVQNA 737
CY+LY + +PEI R L + L + ++++ V +F + P P ++ A
Sbjct: 405 CYRLYTEDEFEKFEKMTVPEIQRCNLASVILQLLAMKVPNVLTF--DFMSKPSPDHIEAA 462
Query: 738 IELLKTIGAL---DDMENLTPLGRHLCTLPVDPNIGKMLLMGAIFQCLNPALTIAAALAH 794
I L +GAL DD LTP+GR + P++P K +L+ + F C LTI + L+
Sbjct: 463 IAQLDLLGALEHKDDQLTLTPIGRKMAAFPLEPRFAKTILLSSKFHCTEEILTIVSLLSV 522
Query: 795 RNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAKRNRRERDFCWENFLSPI 854
+ P + EV ++ F DHI LL + +K+ N+ D+C ENF++
Sbjct: 523 DSVLYNPPARRDEVQSVRKKFISSE-GDHITLLNIYRTFKNIGGNK---DWCKENFVNSK 578
Query: 855 TLQMMEDMRSQFLDLLSDIGF-VDKSKGPSAYNRYSHDLEMVCAILCAGLYPNVVQCKRK 913
+ ++ ++R+Q ++ + + S+G D+E V + L+ N + +
Sbjct: 579 NMLLVAEVRAQLREICLKMSMPIMSSRG---------DMESVRRCMAHSLFMNTAELQTD 629
Query: 914 GKRAVFYTKEVGQVALHPSSVNANQNNFPLPYMVYSEMVKTNNINVYD 961
G A T + VA+HPSSV + P +VY+ ++ TN + D
Sbjct: 630 GTYATTDTHQ--PVAIHPSSVLFHCK--PA-CVVYTSLLYTNKCYMRD 672
Score = 260 (96.6 bits), Expect = 1.6e-65, Sum P(2) = 1.6e-65
Identities = 64/192 (33%), Positives = 93/192 (48%)
Query: 278 REKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQ 337
R LP F+ + + L + V+ GETG GKTTQ+PQ++ E +S +G I TQ
Sbjct: 62 RRSLPIFRARGQLLAQLRNLDNAVLIGETGSGKTTQIPQYLYEGGISR-QGI---IAVTQ 117
Query: 338 PXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVEDPDLS 397
P E+ LG+ VGY +R E S TR+ F T G+LLR+ + D L
Sbjct: 118 PRRVAAISLATRVSDEKRTELGKLVGYTVRFEDVTSEDTRIKFLTDGMLLREAISDSLLR 177
Query: 398 CVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXX-----XMSATINADLFSKYFGNA 452
S +++DE HER ++ D MSAT++ DLFS+YF A
Sbjct: 178 KYSCVILDEAHERTIHTDVLFGVVKTAQKRRKELGKLPLKVIVMSATMDVDLFSQYFNRA 237
Query: 453 PTVHIPGLTFPV 464
P +++ G P+
Sbjct: 238 PVLYLEGRQHPI 249
>UNIPROTKB|F1MWZ4 [details] [associations]
symbol:F1MWZ4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=IEA] [GO:0033613 "activating
transcription factor binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0000182
"rDNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005654 GO:GO:0005730
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:DAAA02048722
IPI:IPI00693412 Ensembl:ENSBTAT00000016932 Uniprot:F1MWZ4
Length = 714
Score = 483 (175.1 bits), Expect = 1.9e-65, Sum P(2) = 1.9e-65
Identities = 130/412 (31%), Positives = 209/412 (50%)
Query: 557 ILVFLTGWNDISKLLDQIK-VNKFLGD--PNKFLVLPLHGSMPTINQREIFDRPPPNKRK 613
ILVFLTG +I + + + K L D P+ LVLPL+ S+P Q +F R P RK
Sbjct: 298 ILVFLTGQEEIEAMSKTCRDIAKHLPDGCPS-MLVLPLYASLPYAQQLRVFQRAPKGYRK 356
Query: 614 IVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRV 673
++++TNIAE+SITI + YVVD G K Y+ + L L +SK A QR GRAGR
Sbjct: 357 VIISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRTGRAGRE 416
Query: 674 QPGVCYKLYPRIIHDAMLPYQLPEILRTPLQELCLHIKSLQLGTVGSFLSKALQPPDPLA 733
G+CY+LY + +PEI R L + L + ++++ V +F + P P
Sbjct: 417 DSGICYRLYTEDEFEKFEKMTVPEIQRCNLASVMLQLLAMKIPNVLTF--DFMSKPSPDH 474
Query: 734 VQNAIELLKTIGALDDMEN---LTPLGRHLCTLPVDPNIGKMLLMGAIFQCLNPALTIAA 790
+Q AI L+ +GAL+ + LTP+GR + P++P K +L+ F C LTI A
Sbjct: 475 IQAAIAQLELLGALEHRDGQLTLTPMGRKMAAFPLEPKFAKTILLSPKFHCTEEILTIVA 534
Query: 791 ALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAKRNRRERDFCWENF 850
L+ + P + + EV ++ F DH+ LL + +K+ N+ ++C ENF
Sbjct: 535 LLSVDSILYNPPSRRDEVQSVRKKFVSSE-GDHLTLLNVYRTFKNTGGNK---EWCKENF 590
Query: 851 LSPITLQMMEDMRSQFLDLLSDIGF-VDKSKGPSAYNRYSHDLEMVCAILCAGLYPNVVQ 909
++ + ++ ++R+Q D+ + + S+G D E + L L+ + +
Sbjct: 591 VNSKNMMLVAEVRAQLRDICIKMSMPIVSSRG---------DTESIRRCLAHSLFTSTAE 641
Query: 910 CKRKGKRAVFYTKEVGQVALHPSSVNANQNNFPLPYMVYSEMVKTNNINVYD 961
+ G A T + VA+HPSSV + P +VY+E++ T+ + D
Sbjct: 642 LQPDGSYATTDTHQ--PVAIHPSSVLFHCK--PA-CVVYTELLFTSKCYMRD 688
Score = 253 (94.1 bits), Expect = 1.9e-65, Sum P(2) = 1.9e-65
Identities = 61/192 (31%), Positives = 91/192 (47%)
Query: 278 REKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQ 337
R LP F+ + + L + V+ GETG GKTTQ+PQ++ E + G I TQ
Sbjct: 78 RRNLPIFQARGQLLAQLRNLDSAVLIGETGSGKTTQIPQYLYEGGI----GRQAIIAVTQ 133
Query: 338 PXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVEDPDLS 397
P E+ LG+ VGY +R + S T++ F T G+LLR+ + D L
Sbjct: 134 PRRVAAISLATRVSDEKRTELGKLVGYTVRFDDVTSDDTKIKFLTDGMLLREAISDCLLR 193
Query: 398 CVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXX-----XMSATINADLFSKYFGNA 452
S +++DE HER ++ D MSAT++ DLFS+YF A
Sbjct: 194 KYSCIILDEAHERTLHTDVLFGVVKAAQKRRKELGKLPLKVLVMSATMDVDLFSQYFNGA 253
Query: 453 PTVHIPGLTFPV 464
P +++ G P+
Sbjct: 254 PVLYLEGRQHPI 265
>RGD|1306942 [details] [associations]
symbol:Tdrd9 "tudor domain containing 9" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;ISS] [GO:0007140 "male meiosis" evidence=ISO;ISS]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=ISO;ISS] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0009566
"fertilization" evidence=ISO;ISS] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0031047 "gene silencing by RNA"
evidence=IEA] [GO:0034587 "piRNA metabolic process"
evidence=ISO;ISS] [GO:0043046 "DNA methylation involved in gamete
generation" evidence=ISO;ISS] [GO:0071547 "piP-body"
evidence=ISO;ISS] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 InterPro:IPR002999
RGD:1306942 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634 GO:GO:0030154
GO:GO:0009566 GO:GO:0007283 GO:GO:0003676 GO:GO:0031047
GO:GO:0007140 Pfam:PF00567 SMART:SM00333 PROSITE:PS50304
GO:GO:0043046 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0034587 eggNOG:COG1643 GeneTree:ENSGT00700000104393
GO:GO:0008026 GO:GO:0071547 CTD:122402 OrthoDB:EOG4F4S96
HOGENOM:HOG000047965 EMBL:AABR03050289 EMBL:AABR03048647
EMBL:AABR03049552 EMBL:AABR03049859 EMBL:AABR03050293
EMBL:AABR03051941 EMBL:BC104675 IPI:IPI00655293 IPI:IPI00895578
RefSeq:XP_001072421.2 UniGene:Rn.126122 STRING:Q3MHU3 PRIDE:Q3MHU3
Ensembl:ENSRNOT00000017118 GeneID:299343 KEGG:rno:299343
UCSC:RGD:1306942 NextBio:645254 Genevestigator:Q3MHU3
Uniprot:Q3MHU3
Length = 1384
Score = 464 (168.4 bits), Expect = 3.2e-64, Sum P(2) = 3.2e-64
Identities = 117/298 (39%), Positives = 165/298 (55%)
Query: 556 AILVFLTGWNDISKLLDQIKVNKFLGDPNKFLVLPLHGSMPTINQREIFDRPPPNKRKIV 615
++LVFL G +I+ + ++ N + V PLH S+ Q +F P P RKI+
Sbjct: 389 SVLVFLPGLGEIN-YMHELLTNMI---HKRLQVYPLHSSVTLEEQNNVFLSPVPGYRKII 444
Query: 616 LATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQP 675
L+TNIAESS+T+ DV YV+D + D L SW SK S QR+GRAGRV
Sbjct: 445 LSTNIAESSVTVPDVKYVIDFCLTRTLVCDEDTNYQSLRLSWASKTSCDQRKGRAGRVSK 504
Query: 676 GVCYKLYPRIIHDAMLP-YQLPEILRTPLQELCLHIKSLQLGTVGSFLSKALQPPDPLAV 734
G CY+L R D+ +P + +PE+LR PL L +K L +G + L+ AL PP +
Sbjct: 505 GYCYRLIHRDFWDSAIPDHVVPEMLRCPLGSTVLKVKLLDMGEPRALLATALSPPSLSDI 564
Query: 735 QNAIELLKTIGALD-----DMEN-----LTPLGRHLCTLPVDPNIGKMLLMGAIFQCLNP 784
+ I LLK +GAL + EN LT LGR L LPV +GK++++G +F CL+
Sbjct: 565 ERTILLLKEVGALAVSGQREDENPHDGELTFLGRVLAQLPVSQQLGKLIVLGHVFGCLDE 624
Query: 785 ALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAKRNRRE 842
L IAAAL+ +N F +P + K F+G S SD +AL++AF ++ A R R E
Sbjct: 625 CLIIAAALSLKNFFTMPFRQHLDGYRNKVHFSGSSRSDCLALVEAFRAWQ-ACRQRGE 681
Score = 282 (104.3 bits), Expect = 3.2e-64, Sum P(2) = 3.2e-64
Identities = 63/170 (37%), Positives = 86/170 (50%)
Query: 281 LPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQPXX 340
LP + K E + + N V+++ G TG GK+TQLPQ++L+ R A CNI+ TQP
Sbjct: 134 LPINRCKEEVISLIESNSVVIIHGATGSGKSTQLPQYVLDHYTQ--RSAFCNIVVTQPRK 191
Query: 341 XXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVEDPDLSCVS 400
ER LG VGYQ+ LE + TRL++ TTGVLL+++V L +
Sbjct: 192 IGASSIARWISKERSWTLGGLVGYQVGLEKTATEDTRLIYMTTGVLLQKIVSAKSLMEFT 251
Query: 401 HLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXX-MSATINADLFSKYF 449
H+ +DE+HER DF MSATIN F+ YF
Sbjct: 252 HVFIDEVHERTEEMDFLLLVVRKLLRTNSRFVKVILMSATINCKQFADYF 301
Score = 40 (19.1 bits), Expect = 5.2e-19, Sum P(2) = 5.2e-19
Identities = 8/24 (33%), Positives = 11/24 (45%)
Query: 631 VYVVDCGKAKETSYDALNKLACLL 654
V+ VD G D L ++ C L
Sbjct: 980 VFFVDYGNRSHVDLDLLREIPCQL 1003
Score = 37 (18.1 bits), Expect = 1.1e-18, Sum P(2) = 1.1e-18
Identities = 8/32 (25%), Positives = 17/32 (53%)
Query: 915 KRAVFYTKEVGQVALHPSSVNANQNNFPLPYM 946
+R + KEVG +A+ + N ++ L ++
Sbjct: 565 ERTILLLKEVGALAVSGQREDENPHDGELTFL 596
>UNIPROTKB|F1PRA1 [details] [associations]
symbol:DHX33 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045943 "positive regulation of transcription
from RNA polymerase I promoter" evidence=IEA] [GO:0033613
"activating transcription factor binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0000182 "rDNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005654 GO:GO:0005730
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AAEX03003580
Ensembl:ENSCAFT00000024626 Uniprot:F1PRA1
Length = 616
Score = 461 (167.3 bits), Expect = 3.9e-64, Sum P(2) = 3.9e-64
Identities = 140/468 (29%), Positives = 226/468 (48%)
Query: 510 DVDIDSNYKN-----YRASTRASLEAWSAEQIDLGLVESTIEYICR-HE---GDGAILVF 560
DVD+ S Y N Y + ++ + +Q + + + + + H+ ILVF
Sbjct: 144 DVDLFSQYFNGASVLYLEGRQHPIQVFYTKQPQQDYLHAALVSVFQIHQEAPSSQDILVF 203
Query: 561 LTGWNDISKLLDQIK-VNKFLGD--PNKFLVLPLHGSMPTINQREIFDRPPPNKRKIVLA 617
LTG +I + + + K L D P+ LVLPL+ S+P Q +F P RK+++A
Sbjct: 204 LTGQEEIEAVSKTCRDIAKHLPDGCPS-MLVLPLYASLPYAQQLRVFQGAPKGCRKVIIA 262
Query: 618 TNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPGV 677
TNIAE+SITI + YVVD G K Y+ + L L +SK A QR GRAGR G+
Sbjct: 263 TNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRAGRAGREDSGI 322
Query: 678 CYKLYPRIIHDAMLPYQLPEILRTPLQELCLHIKSLQLGTVGSFLSKALQPPDPLAVQNA 737
CY+LY + +PEI R L + L + ++++ V +F + P P +Q A
Sbjct: 323 CYRLYTENEFEKFEKMTVPEIQRCNLASVLLQLLAMKVPNVLTF--DFMSKPSPDHMQAA 380
Query: 738 IELLKTIGALDDMEN---LTPLGRHLCTLPVDPNIGKMLLMGAIFQCLNPALTIAAALAH 794
+ L +GAL+ +N LTP+GR + P++P K +L+ F C LTI + L+
Sbjct: 381 VAQLDLLGALERKDNQLTLTPIGRKMAAFPLEPKFAKTILLSPKFHCTEEILTIVSLLSV 440
Query: 795 RNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAKRNRRERDFCWENFLSPI 854
+ P + + EV ++ F DHI LL Y+ K ++D+C ENF++
Sbjct: 441 DSVLYNPPSRRDEVQAMRKKFLSSE-GDHITLLNI---YRTFKSLGGDKDWCRENFVNSR 496
Query: 855 TLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYSHDLEMVCAILCAGLYPNVVQCKRKG 914
+ + ++R+Q D+ K P R D+E + L L+ + + + G
Sbjct: 497 NMMLAAEVRAQLRDICL------KMSMPMVSCR--GDVESIRRCLAHSLFMSAAELQPDG 548
Query: 915 KRAVFYTKEVGQ-VALHPSSVNANQNNFPLPYMVYSEMVKTNNINVYD 961
+ T + Q VA+HPSS + P +VY+E++ T+ + D
Sbjct: 549 ---TYTTTDSRQPVAIHPSSALFHCR--PA-CVVYTELLHTSKCYMRD 590
Score = 230 (86.0 bits), Expect = 3.9e-64, Sum P(2) = 3.9e-64
Identities = 57/168 (33%), Positives = 82/168 (48%)
Query: 302 VSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQPXXXXXXXXXXXXXXERGENLGET 361
+SGETG GKTTQLPQ++ E + +G I TQP E+ LG+
Sbjct: 4 LSGETGSGKTTQLPQYLYEGGIGR-QGV---IAVTQPRRVAAISLATRVSDEKRTELGKL 59
Query: 362 VGYQIRLESKRSAQTRLLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFXXXXX 421
VGY +R + S TR+ F T G+LLR+ + D L S +++DE HER ++ D
Sbjct: 60 VGYTVRFDDVSSEDTRIKFLTDGMLLREAISDSLLRKYSCIILDEAHERTVHTDVLFGVV 119
Query: 422 XXXXXXXXXXXXX-----XMSATINADLFSKYFGNAPTVHIPGLTFPV 464
MSAT++ DLFS+YF A +++ G P+
Sbjct: 120 KAAQRRRKELRKLPLKVIVMSATMDVDLFSQYFNGASVLYLEGRQHPI 167
>DICTYBASE|DDB_G0270110 [details] [associations]
symbol:dhx33 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
dictyBase:DDB_G0270110 GO:GO:0005524 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K14781 RefSeq:XP_646548.1
EnsemblProtists:DDB0233404 GeneID:8617514 KEGG:ddi:DDB_G0270110
InParanoid:Q55CD3 OMA:EICINRE Uniprot:Q55CD3
Length = 730
Score = 430 (156.4 bits), Expect = 4.7e-64, Sum P(2) = 4.7e-64
Identities = 120/387 (31%), Positives = 204/387 (52%)
Query: 552 EGDGAILVFLTGWNDISKLLDQIKVNKFLGDP--NKFLVL-PLHGSMPTINQREIFDRPP 608
E G ILVFLTG ++I L +++ +++ P +K L++ P+ ++P Q ++F++ P
Sbjct: 294 EDGGDILVFLTGRDEIENL-EKLLLDRIPRLPVGSKDLIVCPIFSALPQEQQMKVFEKAP 352
Query: 609 PNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASAHQRRG 668
RK++LATNIAE+S+TI+ + YVVD G K ++ + L ISKASA QR G
Sbjct: 353 KGSRKVILATNIAETSLTINGIRYVVDSGAVKSKIFNPKIGIDSLNIIPISKASAKQRTG 412
Query: 669 RAGRVQPGVCYKLYPRIIHDAMLPYQLPEILRTPLQELCLHIKSLQLGTVGSFLSKALQP 728
RAGR G CY+LY + + + +PEI R+ + + L +K++ + + SF L+
Sbjct: 413 RAGREFEGKCYRLYTQETFEKLDTSSIPEIKRSNIANVILQLKTIGINDILSF--DFLES 470
Query: 729 PDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGKMLLMGAIFQCLNPALTI 788
P +V ++ELL + A+ D +LT LG+ + P+DP K L+ F+C L I
Sbjct: 471 PPVASVIKSLELLFCLDAISDNGSLTELGKKMALFPLDPMYSKTLIKSIEFECSEEVLII 530
Query: 789 AAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAKRNRRERDFCWE 848
+ L+ + F P +KEV++ K+ F DHI L F ++ +K ++++ +C++
Sbjct: 531 ISILSVESIFFTPKEKKKEVEDVKKIFFSPD-GDHITFLNVFREFQKSKPQQQQQ-WCFD 588
Query: 849 NFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYSHDLEMVCAILCAGLYPN-- 906
+F I L+ M + + F L+ + K P D + + G + N
Sbjct: 589 HF---INLKSMIKVLNVFEQLVK---YCISLKLPIV--SCGSDFDRIKKSFIGGFFLNTA 640
Query: 907 VVQCKRKGKRAVFYTKEVGQVALHPSS 933
++Q +K K V KE+ +HP+S
Sbjct: 641 ILQPDKKYKTMVD-NKEI---QIHPTS 663
Score = 302 (111.4 bits), Expect = 4.7e-64, Sum P(2) = 4.7e-64
Identities = 82/257 (31%), Positives = 123/257 (47%)
Query: 219 NDSGIESSEVARRPKLSVKVANTISPPQSDSAKERLNVILKERQEKLKSSDSGKAMLSFR 278
N+ I S + + K +K + Q + K N LK + E K + K + +
Sbjct: 14 NNKVITKSIHSNKGKFELK-KKPVQLQQISNDKINDNNNLKNQLEIPK--EIPKEIKLQK 70
Query: 279 EKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQP 338
E LP F K LK E+ +++ ETG GKTTQ+PQ++ E G I TQP
Sbjct: 71 ESLPVFTAKDALLKNFKEHSTVIIISETGTGKTTQIPQYLYENGYKD-NGI---IAITQP 126
Query: 339 XXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVEDPDLSC 398
E G LG+ VGY +R + K + +T+L + T G+L+R+ + D LS
Sbjct: 127 RRVAAVSISKRVSQEMGVELGDQVGYCVRFDDKTNEKTKLKYMTDGMLVREAMLDSSLSK 186
Query: 399 VSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXX---XXXMSATINADLFSKYFGNAPTV 455
S +++DE HER +N D MSAT++A+LFS+YF NAP +
Sbjct: 187 YSVIILDEAHERTLNTDVLFGLLKSIQKRREKKNPLKIIIMSATLDAELFSQYFNNAPVL 246
Query: 456 HIPGLTFPVTDLFLEDV 472
+I G FPV + E++
Sbjct: 247 YIEGRQFPVQIYYTEEI 263
>SGD|S000005294 [details] [associations]
symbol:PRP2 "RNA-dependent ATPase in the DEAH-box family"
species:4932 "Saccharomyces cerevisiae" [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008186 "RNA-dependent ATPase
activity" evidence=IDA] [GO:0071006 "U2-type catalytic step 1
spliceosome" evidence=IMP;IDA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0000349 "generation of catalytic spliceosome for
first transesterification step" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 SGD:S000005294
GO:GO:0005524 GO:GO:0005634 EMBL:BK006947 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:X77395
GO:GO:0000349 eggNOG:COG1643 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
OrthoDB:EOG4SBJ63 GO:GO:0008186 EMBL:X55936 EMBL:X55999 EMBL:Z71626
PIR:S12334 RefSeq:NP_014408.1 ProteinModelPortal:P20095 SMR:P20095
DIP:DIP-3961N IntAct:P20095 MINT:MINT-496813 STRING:P20095
PaxDb:P20095 EnsemblFungi:YNR011C GeneID:855745 KEGG:sce:YNR011C
CYGD:YNR011c KO:K12814 OMA:DDKIHIN NextBio:980148
Genevestigator:P20095 GermOnline:YNR011C Uniprot:P20095
Length = 876
Score = 438 (159.2 bits), Expect = 8.2e-64, Sum P(3) = 8.2e-64
Identities = 134/450 (29%), Positives = 223/450 (49%)
Query: 555 GAILVFLTGWNDISKLLDQIK-VNKFLGDPNKFLVL-PLHGSMPTINQREIFDRPPPNKR 612
G ILVFLTG +I + +++ + LG K +++ P++ ++P Q +IF P N R
Sbjct: 436 GDILVFLTGQEEIERTKTKLEEIMSKLGSRTKQMIITPIYANLPQEQQLKIFQPTPENCR 495
Query: 613 KIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGR 672
K+VLATNIAE+S+TID + YV+D G KE SY + LL S+AS QR GRAGR
Sbjct: 496 KVVLATNIAETSLTIDGIRYVIDPGFVKENSYVPSTGMTQLLTVPCSRASVDQRAGRAGR 555
Query: 673 VQPGVCYKLYPR--IIHDAMLPYQLPEILRTPLQELCLHIKSLQLGTVGSFLSKALQPPD 730
V PG C++++ + +H+ L + PEI RT L L + L LG + P
Sbjct: 556 VGPGKCFRIFTKWSYLHELELMPK-PEITRTNLSNTVLLL--LSLGVTDLIKFPLMDKPS 612
Query: 731 PLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGKMLLMGAIF-QC---LNPAL 786
++ ++E L +GAL+ +T LG+ +C P +P K+L A QC L L
Sbjct: 613 IPTLRKSLENLYILGALNSKGTITRLGKMMCEFPCEPEFAKVLYTAATHEQCQGVLEECL 672
Query: 787 TIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAKRNRRERDFC 846
TI + L H P + + +++ A S + SDHI L+ F+ ++++K +R +C
Sbjct: 673 TIVSML-HETPSLF-IGQKRD---AAASVLSEVESDHILYLEIFNQWRNSKFSR---SWC 724
Query: 847 WENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAY--NRYSHDLEMVCAILCAGLY 904
++ + T+ + ++R+Q +G V+K+ N + + +G
Sbjct: 725 QDHKIQFKTMLRVRNIRNQLFRCSEKVGLVEKNDQARMKIGNIAGYINARITRCFISGFP 784
Query: 905 PNVVQCKRKGKRAVFYTKEVGQVALHPSS---VNANQN-NFPLPYMVYSEMVKTNNINVY 960
N+VQ G + + + V++HP+S VN + P Y++Y +++ T+ +
Sbjct: 785 MNIVQLGPTGYQTMGRSSGGLNVSVHPTSILFVNHKEKAQRPSKYVLYQQLMLTSKEFIR 844
Query: 961 DSTNISEYALLL-----FGGNLIPSKTGEG 985
D I + L+ +LI KT G
Sbjct: 845 DCLVIPKEEWLIDMVPQIFKDLIDDKTNRG 874
Score = 305 (112.4 bits), Expect = 8.2e-64, Sum P(3) = 8.2e-64
Identities = 70/188 (37%), Positives = 100/188 (53%)
Query: 278 REKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQ 337
R+ LP + K E L+ + +NQVL++ GETG GKTTQLPQ+++E+ + +G I TQ
Sbjct: 220 RKLLPVHQYKDELLQEIKKNQVLIIMGETGSGKTTQLPQYLVEDGFTD-QGK-LQIAITQ 277
Query: 338 PXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSA-QTRLLFCTTGVLLRQLVEDPDL 396
P E LG+ VGYQIR E K + +T L + T G+LLR+ + D L
Sbjct: 278 PRRVAATSVAARVADEMNVVLGKEVGYQIRFEDKTTPNKTVLKYMTDGMLLREFLTDSKL 337
Query: 397 SCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGNAPTVH 456
S S +++DE HER + D SAT+NA FS++F N P +
Sbjct: 338 SKYSCIMIDEAHERTLATDILIGLLKDILPQRPTLKLLISSATMNAKKFSEFFDNCPIFN 397
Query: 457 IPGLTFPV 464
+PG +PV
Sbjct: 398 VPGRRYPV 405
Score = 37 (18.1 bits), Expect = 8.2e-64, Sum P(3) = 8.2e-64
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 114 EVFDQNEWWGKLEQMKRGEEQEMIIKRKFS 143
EV QN+ ++E GEE++ K K S
Sbjct: 18 EVTRQNDNAVRIEPSSLGEEEDKEAKDKNS 47
>UNIPROTKB|I3LRK0 [details] [associations]
symbol:I3LRK0 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 GO:GO:0004386
GeneTree:ENSGT00550000074257 EMBL:FP102731 EMBL:CU694750
Ensembl:ENSSSCT00000027140 Uniprot:I3LRK0
Length = 524
Score = 590 (212.7 bits), Expect = 1.1e-63, Sum P(2) = 1.1e-63
Identities = 127/277 (45%), Positives = 187/277 (67%)
Query: 534 EQIDLGLVESTIEYIC--RHE---GDGAILVFLTGWNDISKLLDQIKVNKFLGD--PNKF 586
E+++L L+E+ +E+I +H GAILVFL G +I L +Q++ N + N+
Sbjct: 16 EKVNLELIEALLEWIVDGKHSYPPDPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRC 75
Query: 587 LVLPLHGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDA 646
+V PLH S+ + Q+ +F +PP KI+++TNIAE+SITIDDVVYV+D GK KE YDA
Sbjct: 76 VVHPLHSSLSSEEQQAVFVKPPVGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDA 135
Query: 647 LNKLACLLPSWISKASAHQRRGRAGRVQPGVCYKLYP-RIIHDAMLPYQLPEILRTPLQE 705
+ L +++S+A+A QR+GRAGRV GVC+ L+ + +L QLPEI R PL++
Sbjct: 136 SKGMESLEDTFVSQANALQRKGRAGRVTSGVCFHLFTSHHFNHQLLKQQLPEIQRVPLEQ 195
Query: 706 LCLHIKSLQLGT---VGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCT 762
LCL IK L++ + + S S+ ++PP P +++ + L+ +GAL E LTPLG HL +
Sbjct: 196 LCLRIKILEMFSTHNLQSVFSRLIEPPHPDSLRASKIRLRDLGALTPDEKLTPLGYHLAS 255
Query: 763 LPVDPNIGKMLLMGAIFQCLNPALTIAAALAHRNPFV 799
LPVD IGK++L G+IF+CL+PALTIAA+LA ++PFV
Sbjct: 256 LPVDVRIGKLMLFGSIFRCLDPALTIAASLAFKSPFV 292
Score = 91 (37.1 bits), Expect = 1.1e-63, Sum P(2) = 1.1e-63
Identities = 19/44 (43%), Positives = 31/44 (70%)
Query: 1001 VLELIRKLRGELDKLLNRKIEDPRVDLSV--EGKAVVSAVVELL 1042
V EL+++LR ELD+LL KI++P +DL G ++S +V+L+
Sbjct: 478 VAELVKELRCELDQLLQDKIKNPSIDLCTCPRGSRIISMIVKLV 521
>GENEDB_PFALCIPARUM|MAL13P1.322 [details] [associations]
symbol:MAL13P1.322 "splicing factor,
putative" species:5833 "Plasmodium falciparum" [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
EMBL:AL844509 HOGENOM:HOG000175261 KO:K12815 RefSeq:XP_002809102.1
ProteinModelPortal:C0H5K5 EnsemblProtists:MAL13P1.322:mRNA
GeneID:813888 KEGG:pfa:MAL13P1.322 EuPathDB:PlasmoDB:PF3D7_1364300
OMA:YFHNAAK ProtClustDB:CLSZ2500787 Uniprot:C0H5K5
Length = 1151
Score = 671 (241.3 bits), Expect = 2.5e-63, P = 2.5e-63
Identities = 206/741 (27%), Positives = 337/741 (45%)
Query: 246 QSDSAKERLNVILKERQEKLKSSDSGKAMLSFREKLPAFKMKAEFLKAVAENQVLVVSGE 305
+ D L I ++K + + +L +E LP +K K E L AV N ++++ GE
Sbjct: 444 KKDKIYSSLFNIENNNKDKKNTLKDKEELLKLKESLPIYKSKHELLDAVYNNNIIIIVGE 503
Query: 306 TGCGKTTQLPQFILEEELSSLRGADCNIICTQPXXXXXXXXXXXXXXERGENLGETVGYQ 365
TG GKTTQ+ Q++ EE G C CTQP E ++G VGY
Sbjct: 504 TGSGKTTQIVQYLYEEGYHR-NGIIC---CTQPRRVAAVSVAYRVSYEMNVDIGSLVGYT 559
Query: 366 IRLESKRSAQTRLLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFXXXXXXXXX 425
IR E + T++ + T G+LLR+ + D +L S +++DE HER +N D
Sbjct: 560 IRFEDNTTKDTKIRYVTDGILLRETLNDKELDKYSVIIMDEAHERSINTDVLLGILKNIC 619
Query: 426 XXXXXXXXXXMSATINADLFSKYFGNAPTVHIPGLTFPVTDLFLEDVLEKTRYKMNSKLD 485
SATI+A FS +FGNAP +I G TF V +E R N ++
Sbjct: 620 LKRNDLKLIVTSATIDAKKFSAFFGNAPIYNIQGRTFKVH-------IEYLRTPCNDYIE 672
Query: 486 SFQGNXXXXXXQDSKKDHLTA---LFEDVDIDSNYKNYRASTR--ASLEAWSAEQIDLGL 540
D+ D+ +F D N Y S R E++ + +
Sbjct: 673 CAVQKAIQIHVSDNNYDNNFGDILIFMTGQEDINATCYLLSERFYEVYESYKESKNNKKD 732
Query: 541 VESTIEYICRHEGDGAILVFLTGWNDISKLLD-QIKVNKFLGDPNKFLVLPLHGSMPTIN 599
+ I+ I + + ++I K +D N + P F + P++ + +
Sbjct: 733 TINKIKNILNEDNNNN-----NNDSNIKKKVDGDNNTNDHMIYP--FYIFPIYSQLSSEQ 785
Query: 600 QREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWIS 659
Q +IF + + RKI+++TNIAE+S+T+D + YV+D G K Y+ + L + IS
Sbjct: 786 QSKIFKKY--DLRKIIVSTNIAETSLTLDGIKYVIDTGYCKLKVYNQTIGMDVLQVTPIS 843
Query: 660 KASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQ--LPEILRTPLQELCLHIKSLQLGT 717
+A+A+QR GRAGR G+CY+LY L YQ +PEI R+ L + L +KSL +
Sbjct: 844 QANANQRSGRAGRTGAGICYRLYTENTFLCDL-YQNNIPEIQRSNLSNVVLLLKSLHVQN 902
Query: 718 VGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGKMLLMGA 777
+ F + P ++ N++ L +GA+++ NLT +GR + P+DP + K+++
Sbjct: 903 LFEF--DFIDVPSKESIINSLHELWVLGAINNEGNLTDIGRKMVQFPLDPPLSKIVIYSQ 960
Query: 778 IFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAK 837
FQC L I + L+ + F+ + ++ K F SDH+ LL Y +
Sbjct: 961 NFQCTKEILIIVSMLSSPSIFLESKENNESIESKKEKFTVPE-SDHLTLLNI---YLQWR 1016
Query: 838 RNRRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYSHDLEMVCA 897
+ +C +NF+ L +++ SQ +D++ + K S N++ E++
Sbjct: 1017 SHNYSYSWCTKNFIQYKALNKAKEVYSQLIDIIKTLNI----KNVSCDNKW----ELIRK 1068
Query: 898 ILCAGLYPNVVQCKRKGKRAVFYTKEVGQVALHPSSVNANQNNFPLPYMVYSEMVKTN-- 955
+C+G + N + K + T V HP+S N P Y++Y E+V T
Sbjct: 1069 TICSGYFHNAAKLKSFSEYINLRTNVSCHV--HPNSSLYNIGYTP-DYVIYQEIVFTTKE 1125
Query: 956 ---NINVYDSTNISEYALLLF 973
N+ D + E L F
Sbjct: 1126 YMRNVTTVDPEWLCELGPLFF 1146
>UNIPROTKB|C0H5K5 [details] [associations]
symbol:MAL13P1.322 "Splicing factor, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
EMBL:AL844509 HOGENOM:HOG000175261 KO:K12815 RefSeq:XP_002809102.1
ProteinModelPortal:C0H5K5 EnsemblProtists:MAL13P1.322:mRNA
GeneID:813888 KEGG:pfa:MAL13P1.322 EuPathDB:PlasmoDB:PF3D7_1364300
OMA:YFHNAAK ProtClustDB:CLSZ2500787 Uniprot:C0H5K5
Length = 1151
Score = 671 (241.3 bits), Expect = 2.5e-63, P = 2.5e-63
Identities = 206/741 (27%), Positives = 337/741 (45%)
Query: 246 QSDSAKERLNVILKERQEKLKSSDSGKAMLSFREKLPAFKMKAEFLKAVAENQVLVVSGE 305
+ D L I ++K + + +L +E LP +K K E L AV N ++++ GE
Sbjct: 444 KKDKIYSSLFNIENNNKDKKNTLKDKEELLKLKESLPIYKSKHELLDAVYNNNIIIIVGE 503
Query: 306 TGCGKTTQLPQFILEEELSSLRGADCNIICTQPXXXXXXXXXXXXXXERGENLGETVGYQ 365
TG GKTTQ+ Q++ EE G C CTQP E ++G VGY
Sbjct: 504 TGSGKTTQIVQYLYEEGYHR-NGIIC---CTQPRRVAAVSVAYRVSYEMNVDIGSLVGYT 559
Query: 366 IRLESKRSAQTRLLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFXXXXXXXXX 425
IR E + T++ + T G+LLR+ + D +L S +++DE HER +N D
Sbjct: 560 IRFEDNTTKDTKIRYVTDGILLRETLNDKELDKYSVIIMDEAHERSINTDVLLGILKNIC 619
Query: 426 XXXXXXXXXXMSATINADLFSKYFGNAPTVHIPGLTFPVTDLFLEDVLEKTRYKMNSKLD 485
SATI+A FS +FGNAP +I G TF V +E R N ++
Sbjct: 620 LKRNDLKLIVTSATIDAKKFSAFFGNAPIYNIQGRTFKVH-------IEYLRTPCNDYIE 672
Query: 486 SFQGNXXXXXXQDSKKDHLTA---LFEDVDIDSNYKNYRASTR--ASLEAWSAEQIDLGL 540
D+ D+ +F D N Y S R E++ + +
Sbjct: 673 CAVQKAIQIHVSDNNYDNNFGDILIFMTGQEDINATCYLLSERFYEVYESYKESKNNKKD 732
Query: 541 VESTIEYICRHEGDGAILVFLTGWNDISKLLD-QIKVNKFLGDPNKFLVLPLHGSMPTIN 599
+ I+ I + + ++I K +D N + P F + P++ + +
Sbjct: 733 TINKIKNILNEDNNNN-----NNDSNIKKKVDGDNNTNDHMIYP--FYIFPIYSQLSSEQ 785
Query: 600 QREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWIS 659
Q +IF + + RKI+++TNIAE+S+T+D + YV+D G K Y+ + L + IS
Sbjct: 786 QSKIFKKY--DLRKIIVSTNIAETSLTLDGIKYVIDTGYCKLKVYNQTIGMDVLQVTPIS 843
Query: 660 KASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQ--LPEILRTPLQELCLHIKSLQLGT 717
+A+A+QR GRAGR G+CY+LY L YQ +PEI R+ L + L +KSL +
Sbjct: 844 QANANQRSGRAGRTGAGICYRLYTENTFLCDL-YQNNIPEIQRSNLSNVVLLLKSLHVQN 902
Query: 718 VGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGKMLLMGA 777
+ F + P ++ N++ L +GA+++ NLT +GR + P+DP + K+++
Sbjct: 903 LFEF--DFIDVPSKESIINSLHELWVLGAINNEGNLTDIGRKMVQFPLDPPLSKIVIYSQ 960
Query: 778 IFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAK 837
FQC L I + L+ + F+ + ++ K F SDH+ LL Y +
Sbjct: 961 NFQCTKEILIIVSMLSSPSIFLESKENNESIESKKEKFTVPE-SDHLTLLNI---YLQWR 1016
Query: 838 RNRRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYSHDLEMVCA 897
+ +C +NF+ L +++ SQ +D++ + K S N++ E++
Sbjct: 1017 SHNYSYSWCTKNFIQYKALNKAKEVYSQLIDIIKTLNI----KNVSCDNKW----ELIRK 1068
Query: 898 ILCAGLYPNVVQCKRKGKRAVFYTKEVGQVALHPSSVNANQNNFPLPYMVYSEMVKTN-- 955
+C+G + N + K + T V HP+S N P Y++Y E+V T
Sbjct: 1069 TICSGYFHNAAKLKSFSEYINLRTNVSCHV--HPNSSLYNIGYTP-DYVIYQEIVFTTKE 1125
Query: 956 ---NINVYDSTNISEYALLLF 973
N+ D + E L F
Sbjct: 1126 YMRNVTTVDPEWLCELGPLFF 1146
>UNIPROTKB|Q8EEY1 [details] [associations]
symbol:hrpA "ATP-dependent helicase HrpA" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578
OMA:TYQFEPG InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:NP_717826.1 ProteinModelPortal:Q8EEY1 GeneID:1169965
KEGG:son:SO_2229 PATRIC:23524089 ProtClustDB:CLSK906644
Uniprot:Q8EEY1
Length = 1293
Score = 440 (159.9 bits), Expect = 2.7e-63, Sum P(3) = 2.7e-63
Identities = 114/367 (31%), Positives = 197/367 (53%)
Query: 513 IDSNYKNYRASTRASLEAWSAEQIDLGLVESTIEYICRHEGDGAILVFLTGWNDISKLLD 572
+++ Y+ T A L+ QI+ G+ + E + EG G IL+F+ G +I +
Sbjct: 255 VETRYRPLVQDTEADLD-----QIE-GIFAAVDELVA--EGLGDILIFMNGEREIRDTAE 306
Query: 573 QIKVNKFLGDPNKFLVLPLHGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVY 632
Q+ + D +LPL+ + Q ++F R+IVLATN+AE+S+T+ + Y
Sbjct: 307 QLNRRNYR-DTE---ILPLYARLSYGEQSKVFSSH--TGRRIVLATNVAETSLTVPGIRY 360
Query: 633 VVDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLP 692
V+D G A+ + Y K+ L IS+ASA+QR+GR GRV PG+C +LY +
Sbjct: 361 VIDPGTARISRYSYRTKVQRLPIEPISQASANQRQGRCGRVGPGICIRLYDEADFNNRPA 420
Query: 693 YQLPEILRTPLQELCLHIKSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMEN 752
+ PEILRT L + L + ++ LG + +F ++PPDP +++ LL+ + A+ +
Sbjct: 421 FTDPEILRTNLASVILQMLAIGLGDIAAF--PFIEPPDPRHIRDGFLLLEELQAVKQQKG 478
Query: 753 ---LTPLGRHLCTLPVDPNIGKMLLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVD 809
LTPLGR L +PVDP + +M++ CLN L IA+ L+ ++P P++ ++ D
Sbjct: 479 NIVLTPLGRQLSQIPVDPRLARMVIESHQLGCLNEVLVIASGLSIQDPRERPMDKKQASD 538
Query: 810 EAKRSFAGDSCSDHIALLKAFDGYKDAKRNRRERDF---CWENFLSPITLQMMEDMRSQF 866
EA R FA D SD ++ + + K+ ++ F C + +L+ + ++ +D+ +Q
Sbjct: 539 EAHRRFA-DPQSDFVSWVNLWQHLKEQQKELSASQFRKKCRDEYLAYLRVREWQDLYTQL 597
Query: 867 LDLLSDI 873
+ D+
Sbjct: 598 KQAVHDL 604
Score = 304 (112.1 bits), Expect = 2.7e-63, Sum P(3) = 2.7e-63
Identities = 72/221 (32%), Positives = 111/221 (50%)
Query: 247 SDSAKERLNVILKERQ---EKLKSSDSGKAMLSFREKLPAFKMKAEFLKAVAENQVLVVS 303
SD + L + ++ Q EK++ + +++ + LP M+ + KA++ NQV++++
Sbjct: 39 SDKKTQELAKLAEQAQAAFEKVEQRLKARPRINYPDNLPVSGMREDIAKAISANQVVIIA 98
Query: 304 GETGCGKTTQLPQFILEEELSSLRGADCNIICTQPXXXXXXXXXXXXXXERGENLGETVG 363
GETG GKTTQLP+ LE L S RG I TQP E LGE VG
Sbjct: 99 GETGSGKTTQLPKICLELGLGS-RGF---IGHTQPRRLAARSVASRVAEELQSPLGEVVG 154
Query: 364 YQIRLESKRSAQTRLLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFXXXXXXX 423
+++R +++ + T G+LL +L D L +++DE HER +N DF
Sbjct: 155 FKVRFADALKSESYIKLMTDGILLAELTSDRYLDQYDTIIIDEAHERSLNIDFILGYLKQ 214
Query: 424 XXXXXXXXXXXXMSATINADLFSKYFGNAPTVHIPGLTFPV 464
SATI+ + FSK+F NAP + + G T+PV
Sbjct: 215 ILKKRPDLKIIITSATIDVERFSKHFNNAPIIEVSGRTYPV 255
Score = 42 (19.8 bits), Expect = 2.7e-63, Sum P(3) = 2.7e-63
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 1016 LNRKIEDPRVDLSVEGKAVVSAVVEL 1041
+N KIED + L +G+ + S EL
Sbjct: 966 MNFKIEDDKGKLVAQGRVLDSLKAEL 991
>TIGR_CMR|SO_2229 [details] [associations]
symbol:SO_2229 "ATP-dependent helicase HrpA" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578
OMA:TYQFEPG InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:NP_717826.1 ProteinModelPortal:Q8EEY1 GeneID:1169965
KEGG:son:SO_2229 PATRIC:23524089 ProtClustDB:CLSK906644
Uniprot:Q8EEY1
Length = 1293
Score = 440 (159.9 bits), Expect = 2.7e-63, Sum P(3) = 2.7e-63
Identities = 114/367 (31%), Positives = 197/367 (53%)
Query: 513 IDSNYKNYRASTRASLEAWSAEQIDLGLVESTIEYICRHEGDGAILVFLTGWNDISKLLD 572
+++ Y+ T A L+ QI+ G+ + E + EG G IL+F+ G +I +
Sbjct: 255 VETRYRPLVQDTEADLD-----QIE-GIFAAVDELVA--EGLGDILIFMNGEREIRDTAE 306
Query: 573 QIKVNKFLGDPNKFLVLPLHGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVY 632
Q+ + D +LPL+ + Q ++F R+IVLATN+AE+S+T+ + Y
Sbjct: 307 QLNRRNYR-DTE---ILPLYARLSYGEQSKVFSSH--TGRRIVLATNVAETSLTVPGIRY 360
Query: 633 VVDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLP 692
V+D G A+ + Y K+ L IS+ASA+QR+GR GRV PG+C +LY +
Sbjct: 361 VIDPGTARISRYSYRTKVQRLPIEPISQASANQRQGRCGRVGPGICIRLYDEADFNNRPA 420
Query: 693 YQLPEILRTPLQELCLHIKSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMEN 752
+ PEILRT L + L + ++ LG + +F ++PPDP +++ LL+ + A+ +
Sbjct: 421 FTDPEILRTNLASVILQMLAIGLGDIAAF--PFIEPPDPRHIRDGFLLLEELQAVKQQKG 478
Query: 753 ---LTPLGRHLCTLPVDPNIGKMLLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVD 809
LTPLGR L +PVDP + +M++ CLN L IA+ L+ ++P P++ ++ D
Sbjct: 479 NIVLTPLGRQLSQIPVDPRLARMVIESHQLGCLNEVLVIASGLSIQDPRERPMDKKQASD 538
Query: 810 EAKRSFAGDSCSDHIALLKAFDGYKDAKRNRRERDF---CWENFLSPITLQMMEDMRSQF 866
EA R FA D SD ++ + + K+ ++ F C + +L+ + ++ +D+ +Q
Sbjct: 539 EAHRRFA-DPQSDFVSWVNLWQHLKEQQKELSASQFRKKCRDEYLAYLRVREWQDLYTQL 597
Query: 867 LDLLSDI 873
+ D+
Sbjct: 598 KQAVHDL 604
Score = 304 (112.1 bits), Expect = 2.7e-63, Sum P(3) = 2.7e-63
Identities = 72/221 (32%), Positives = 111/221 (50%)
Query: 247 SDSAKERLNVILKERQ---EKLKSSDSGKAMLSFREKLPAFKMKAEFLKAVAENQVLVVS 303
SD + L + ++ Q EK++ + +++ + LP M+ + KA++ NQV++++
Sbjct: 39 SDKKTQELAKLAEQAQAAFEKVEQRLKARPRINYPDNLPVSGMREDIAKAISANQVVIIA 98
Query: 304 GETGCGKTTQLPQFILEEELSSLRGADCNIICTQPXXXXXXXXXXXXXXERGENLGETVG 363
GETG GKTTQLP+ LE L S RG I TQP E LGE VG
Sbjct: 99 GETGSGKTTQLPKICLELGLGS-RGF---IGHTQPRRLAARSVASRVAEELQSPLGEVVG 154
Query: 364 YQIRLESKRSAQTRLLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFXXXXXXX 423
+++R +++ + T G+LL +L D L +++DE HER +N DF
Sbjct: 155 FKVRFADALKSESYIKLMTDGILLAELTSDRYLDQYDTIIIDEAHERSLNIDFILGYLKQ 214
Query: 424 XXXXXXXXXXXXMSATINADLFSKYFGNAPTVHIPGLTFPV 464
SATI+ + FSK+F NAP + + G T+PV
Sbjct: 215 ILKKRPDLKIIITSATIDVERFSKHFNNAPIIEVSGRTYPV 255
Score = 42 (19.8 bits), Expect = 2.7e-63, Sum P(3) = 2.7e-63
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 1016 LNRKIEDPRVDLSVEGKAVVSAVVEL 1041
+N KIED + L +G+ + S EL
Sbjct: 966 MNFKIEDDKGKLVAQGRVLDSLKAEL 991
>UNIPROTKB|F1MNA1 [details] [associations]
symbol:TDRD9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071547 "piP-body" evidence=IEA] [GO:0043046 "DNA
methylation involved in gamete generation" evidence=IEA]
[GO:0034587 "piRNA metabolic process" evidence=IEA] [GO:0009566
"fertilization" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0007140 "male meiosis" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
InterPro:IPR002999 GO:GO:0005524 GO:GO:0005634 GO:GO:0009566
GO:GO:0007283 GO:GO:0003676 GO:GO:0007140 Pfam:PF00567
SMART:SM00333 PROSITE:PS50304 GO:GO:0043046 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0034587
GeneTree:ENSGT00700000104393 GO:GO:0008026 GO:GO:0071547
OMA:INDWFTI EMBL:DAAA02053320 EMBL:DAAA02053321 EMBL:DAAA02053322
EMBL:DAAA02053323 IPI:IPI00699308 Ensembl:ENSBTAT00000027199
Uniprot:F1MNA1
Length = 1392
Score = 450 (163.5 bits), Expect = 3.4e-63, Sum P(2) = 3.4e-63
Identities = 116/301 (38%), Positives = 164/301 (54%)
Query: 556 AILVFLTGWNDISKLLDQIKVNKFLGDPNKFLVLPLHGSMPTINQREIFDRPPPNKRKIV 615
++LVFL G +I+ + ++ N + V PLH S+ Q +F P P RKI+
Sbjct: 393 SVLVFLPGLGEIN-YMHELLTNMV---HKRLQVYPLHSSVTLEEQNNVFLSPVPGYRKII 448
Query: 616 LATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQP 675
L+TNIAESS+T+ DV YV+D + D L SW SK S QR+GRAGRV
Sbjct: 449 LSTNIAESSVTVPDVKYVIDFCLTRTLVCDEDTNYQSLRLSWASKTSCEQRKGRAGRVSK 508
Query: 676 GVCYKLYPRIIHDAMLP-YQLPEILRTPLQELCLHIKSLQLGTVGSFLSKALQPPDPLAV 734
G CY+L + D +P + +PE+LR PL L +K L +G + L+ AL PP +
Sbjct: 509 GYCYRLVHKDFWDNSIPNHVIPEMLRCPLGSTILKVKLLDMGEPRALLATALSPPSLSDI 568
Query: 735 QNAIELLKTIGAL-------DDMEN---LTPLGRHLCTLPVDPNIGKMLLMGAIFQCLNP 784
+ I LLK +GAL DD + LT LGR L LPV +GK++++G +F CL+
Sbjct: 569 ERTILLLKEVGALAVSGRREDDNPHDGELTFLGRVLAQLPVSQQLGKLIVLGHVFGCLDE 628
Query: 785 ALTI---AAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAKRNRR 841
L I AA+L+ +N F +P + K +FAG S SD IAL++AF ++ R R
Sbjct: 629 CLIIVLIAASLSLKNFFAMPFRQHLDGYRNKVNFAGSSRSDCIALVEAFRAWQTC-RQRG 687
Query: 842 E 842
E
Sbjct: 688 E 688
Score = 287 (106.1 bits), Expect = 3.4e-63, Sum P(2) = 3.4e-63
Identities = 70/202 (34%), Positives = 101/202 (50%)
Query: 280 KLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQPX 339
+LP + K E + + N V+++ G TG GK+TQLPQ++L+ L R A CNI+ TQP
Sbjct: 137 ELPISRCKEEVISLIESNSVVIIHGATGSGKSTQLPQYVLDHYLQ--RSAYCNIVVTQPR 194
Query: 340 XXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVEDPDLSCV 399
ERG LG VGYQ+ LE + T+L++ TTGVLL+++V L
Sbjct: 195 KIGASSIARWISRERGWVLGGLVGYQVGLEKIATEDTKLIYMTTGVLLQKIVSAKSLVEF 254
Query: 400 SHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXX-MSATINADLFSKYFG----N--A 452
+H+ +DE+HER DF MSATIN F+ YF N +
Sbjct: 255 THVFIDEVHERTEEMDFLLLVVRKLLRTNSRFVKVVLMSATINCREFADYFAVPVQNKMS 314
Query: 453 PTV--HIPGLTFPVTDLFLEDV 472
P + G F + + +L D+
Sbjct: 315 PAYIFEVEGKPFSIEEYYLNDL 336
>UNIPROTKB|Q8NDG6 [details] [associations]
symbol:TDRD9 "Putative ATP-dependent RNA helicase TDRD9"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0031047 "gene silencing by
RNA" evidence=IEA] [GO:0005634 "nucleus" evidence=ISS] [GO:0034587
"piRNA metabolic process" evidence=ISS] [GO:0007283
"spermatogenesis" evidence=ISS] [GO:0071547 "piP-body"
evidence=ISS] [GO:0043046 "DNA methylation involved in gamete
generation" evidence=ISS] [GO:0009566 "fertilization" evidence=ISS]
[GO:0007140 "male meiosis" evidence=ISS] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
InterPro:IPR002999 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
GO:GO:0030154 GO:GO:0009566 GO:GO:0007283 GO:GO:0003676
GO:GO:0031047 GO:GO:0007140 Pfam:PF00567 SMART:SM00333
PROSITE:PS50304 GO:GO:0043046 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0034587 eggNOG:COG1643 GO:GO:0008026
GO:GO:0071547 EMBL:AL136001 OMA:INDWFTI EMBL:AL132712 EMBL:AL833915
EMBL:AK093483 EMBL:AK097429 EMBL:AK097699 EMBL:AK125978
EMBL:BC016796 EMBL:BC128057 IPI:IPI00384419 IPI:IPI00413613
PIR:G02632 RefSeq:NP_694591.2 UniGene:Hs.21454
ProteinModelPortal:Q8NDG6 SMR:Q8NDG6 STRING:Q8NDG6
PhosphoSite:Q8NDG6 DMDM:290457664 PaxDb:Q8NDG6 PRIDE:Q8NDG6
Ensembl:ENST00000339063 Ensembl:ENST00000409874 GeneID:122402
KEGG:hsa:122402 UCSC:uc001yom.4 UCSC:uc001yon.4 CTD:122402
GeneCards:GC14P104394 HGNC:HGNC:20122 HPA:HPA038120
neXtProt:NX_Q8NDG6 PharmGKB:PA134890186 InParanoid:Q8NDG6
OrthoDB:EOG4F4S96 GenomeRNAi:122402 NextBio:80877 Bgee:Q8NDG6
CleanEx:HS_TDRD9 Genevestigator:Q8NDG6 Uniprot:Q8NDG6
Length = 1382
Score = 458 (166.3 bits), Expect = 6.2e-63, Sum P(2) = 6.2e-63
Identities = 117/297 (39%), Positives = 168/297 (56%)
Query: 556 AILVFLTGWNDIS---KLLDQIKVNKFLGDPNKFLVLPLHGSMPTINQREIFDRPPPNKR 612
++LVFL G +I+ +LL + V+K + V PLH S+ Q +F P P R
Sbjct: 387 SVLVFLPGLGEINYMHELLTSL-VHK------RLQVYPLHSSVALEEQNNVFLSPVPGYR 439
Query: 613 KIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGR 672
KI+L+TNIAESS+T+ DV YV+D + D L SW SK S +QR+GRAGR
Sbjct: 440 KIILSTNIAESSVTVPDVKYVIDFCLTRTLVCDEDTNYQSLRLSWASKTSCNQRKGRAGR 499
Query: 673 VQPGVCYKLYPRIIHDAMLP-YQLPEILRTPLQELCLHIKSLQLGTVGSFLSKALQPPDP 731
V G CY+L + D +P + +PE+LR PL L +K L +G + L+ AL PP
Sbjct: 500 VSRGYCYRLVHKDFWDNSIPDHVVPEMLRCPLGSTILKVKLLDMGEPRALLATALSPPGL 559
Query: 732 LAVQNAIELLKTIGALD-----DMEN-----LTPLGRHLCTLPVDPNIGKMLLMGAIFQC 781
++ I LLK +GAL + EN LT LGR L LPV+ +GK++++G +F C
Sbjct: 560 SDIERTILLLKEVGALAVSGQREDENPHDGELTFLGRVLAQLPVNQQLGKLIVLGHVFGC 619
Query: 782 LNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAKR 838
L+ L IAAAL+ +N F +P + K +F+G S SD IAL++AF +K ++
Sbjct: 620 LDECLIIAAALSLKNFFAMPFRQHLDGYRNKVNFSGSSKSDCIALVEAFKTWKACRQ 676
Score = 276 (102.2 bits), Expect = 6.2e-63, Sum P(2) = 6.2e-63
Identities = 62/170 (36%), Positives = 88/170 (51%)
Query: 281 LPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQPXX 340
LP + K E + + N V+++ G TG GK+TQLPQ+IL+ + R A C+I+ TQP
Sbjct: 132 LPISRYKEEVVSLIESNSVVIIHGATGSGKSTQLPQYILDHYVQ--RSAYCSIVVTQPRK 189
Query: 341 XXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVEDPDLSCVS 400
ER LG VGYQ+ LE + TRL++ TTGVLL+++V L +
Sbjct: 190 IGASSIARWISKERAWTLGGVVGYQVGLEKIATEDTRLIYMTTGVLLQKIVSAKSLMEFT 249
Query: 401 HLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXX-MSATINADLFSKYF 449
H+++DE+HER DF MSATI+ F+ YF
Sbjct: 250 HIIIDEVHERTEEMDFLLLVVRKLLRTNSRFVKVVLMSATISCKEFADYF 299
Score = 37 (18.1 bits), Expect = 4.6e-18, Sum P(2) = 4.6e-18
Identities = 8/32 (25%), Positives = 17/32 (53%)
Query: 915 KRAVFYTKEVGQVALHPSSVNANQNNFPLPYM 946
+R + KEVG +A+ + N ++ L ++
Sbjct: 563 ERTILLLKEVGALAVSGQREDENPHDGELTFL 594
>CGD|CAL0002969 [details] [associations]
symbol:orf19.107 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0002969 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K14781 EMBL:AACQ01000106 RefSeq:XP_714316.1
GeneID:3644014 KEGG:cal:CaO19.107 Uniprot:Q59XP9
Length = 831
Score = 378 (138.1 bits), Expect = 2.1e-62, Sum P(2) = 2.1e-62
Identities = 139/466 (29%), Positives = 232/466 (49%)
Query: 528 LEAWSAEQIDLGLVESTIEYICRHEGDGAILVFLTGWNDIS---KLLDQIKVNKFLGDPN 584
L+A S + +D ++ S I+ I +E +G +L FL G +I K L+Q+ + +
Sbjct: 365 LDAESEDIVDT-MIRSIIQ-INLNEPEGDVLCFLPGQEEIDNCVKSLEQL-APQLPREAP 421
Query: 585 KFLVLPLHGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSY 644
+ LPL+ ++ Q +IF++ P +RK++LATNIAE+SIT+ V YV+D G K +
Sbjct: 422 LIVPLPLYAALSPGQQSKIFEKLPKGRRKVILATNIAETSITVSGVKYVIDSGLRKIKVW 481
Query: 645 DALNKLACLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQLPEILRTPLQ 704
L+ LL + IS+ASA QR GRAGR G ++LYP + A+ Q EI R +
Sbjct: 482 KHNLGLSTLLTTPISQASARQRAGRAGRESEGKVFRLYPESTYMALPKQQESEIKRNDII 541
Query: 705 ELCLHIKSLQLGTVGSFLSKA-LQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTL 763
L +K +LG V L+ + L+ P A+ +A+ L T+GAL+D +T LG + L
Sbjct: 542 LPVLTLK--KLG-VDDLLNWSWLEYPGQDAILSALNTLYTLGALNDSGKVTTLGYKMSIL 598
Query: 764 PVDPNIGKMLLMGAIFQCLNPALTIAAALAHRNPFV-LPVNMQKEVDEAKRSFA--GDSC 820
P+ P + +L+ A F L+P + IA+ L+ N + + E++ +R G+
Sbjct: 599 PLPPQLSVVLITAAEFGVLSPVIDIASCLSVDNLITNVTGEARDEINFKRRQHCPLGNIH 658
Query: 821 SDHIALLKAFDGYK-DAKRNRRERDFCWENF--LSPITLQMMEDMRSQFL--DLLSDIGF 875
D IAL + F Y+ K +E F ++ F + I Q+ E M + D L++
Sbjct: 659 GDLIALYEYFQAYQAQGKEWCKELAFSFKGFKNVEKIKYQLQEYMMTTIKQDDSLTNAEK 718
Query: 876 VDK-SKGPSAYNRYSHDLEM-VCAILCAGLYPNVVQCKRKGKRAVFYTKEVGQ-VALHPS 932
+ +K + + D ++ V +IL + L + F T GQ +++HPS
Sbjct: 719 NKQLAKLRAQLDNEETDKQLDVPSILKSFLKGYITNTAVGMPDRSFRTFNTGQLISVHPS 778
Query: 933 SVNANQNNFP-LPYMVYSEMVK--TNNINVYDSTNISEYALLLFGG 975
S + N + Y+ Y K N++ + + + E A + GG
Sbjct: 779 STLFGKPNMDAIMYIEYVFTTKGYARNVSAIELSWLQEIAPHVIGG 824
Score = 346 (126.9 bits), Expect = 2.1e-62, Sum P(2) = 2.1e-62
Identities = 90/295 (30%), Positives = 139/295 (47%)
Query: 178 PMYRPDLDERHGSTEKELQMSIETERRVGNLLNSSQGNVPVNDSGIESSEVARRPKLSVK 237
P L + G E E+ I+ NL +Q + S+ + KL K
Sbjct: 85 PCTEEPLPQHEGFEEIEVTDDIDETEEPENLPTRTQ------QEKHQHSKNKFKQKLEFK 138
Query: 238 VANTISPPQSDSAKERLNVILKERQEKLKSSDSGKAMLSFREKLPAFKMKAEFLKAVAEN 297
+ Q D E N Q + + + + +L REKLP + K + ++ + N
Sbjct: 139 RKTVVYKDQDDEDDEEENNTFNFSQNSFQLAATAQQLLQIREKLPIYHHKDKIIEYINNN 198
Query: 298 QVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQPXXXXXXXXXXXXXXERGEN 357
QV +V GETG GK+TQ+PQF++ E + G TQP E G
Sbjct: 199 QVTIVIGETGSGKSTQIPQFLMPENPKMI-GV------TQPRRVAAASLAARVSEEYGCK 251
Query: 358 LGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFX 417
LG+ VGYQ+R + + QT+L + T G+LLR+++ D +L+ S +++DE HER + D
Sbjct: 252 LGQDVGYQVRFTNMTNRQTKLKYLTDGMLLREIMLDSNLTKYSTIILDEAHERTILTDLI 311
Query: 418 XXXXXXXXXXXXXXXXXX--MSATINADLFSKYFGNAPTVHIPGLTFPVTDLFLE 470
MSAT+NA+LFS +FGNAP ++I G +PV+ +L+
Sbjct: 312 MGFLKQIITSGKRKDLKIVVMSATLNAELFSNFFGNAPILYIEGKMYPVSQFYLD 366
>UNIPROTKB|F5GXM6 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K13117 EMBL:AL023803
UniGene:Hs.444520 DNASU:60625 GeneID:60625 KEGG:hsa:60625 CTD:60625
HGNC:HGNC:15861 GenomeRNAi:60625 NextBio:65461 IPI:IPI00513682
RefSeq:NP_001177738.1 ProteinModelPortal:F5GXM6 SMR:F5GXM6
Ensembl:ENST00000373323 UCSC:uc010zwc.2 ArrayExpress:F5GXM6
Bgee:F5GXM6 Uniprot:F5GXM6
Length = 672
Score = 515 (186.3 bits), Expect = 1.0e-61, Sum P(2) = 1.0e-61
Identities = 131/402 (32%), Positives = 212/402 (52%)
Query: 541 VESTIEYICR-H--EGDGAILVFLTGWNDI----SKLLDQIKVNKFLGDPNKFLVLPLHG 593
++ST+E + + H EGDG +L FLTG ++ S L++Q + G VLP++
Sbjct: 227 IKSTVETVVKIHQTEGDGDVLAFLTGQEEVETVVSMLIEQARALARTGMKRHLRVLPMYA 286
Query: 594 SMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACL 653
+P+ Q ++F+R + RK+++ATN+AE+SITI +VYV+DCG K +Y+ + CL
Sbjct: 287 GLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIECL 346
Query: 654 LPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQLPEILRTPLQELCLHIKSL 713
+ +S+ASA+QR GR GR + G CY+LY D + +PE+ R+ L + L +K+L
Sbjct: 347 VVVPVSQASANQRAGRGGRSRSGKCYRLYTEEAFDKLPQSTVPEMQRSNLAPVILQLKAL 406
Query: 714 QLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLT-PLGRHLCTLPVDPNIGKM 772
+ V F + PP ++ A+ELL +G LD LT PLG + P++P KM
Sbjct: 407 GIDNVLRF--HFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEFPLNPMFAKM 464
Query: 773 LLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDG 832
LL F C L+IAA + +N FV+P N + R FA + DH+ +L ++
Sbjct: 465 LLESGNFGCSQEILSIAAMMQIQNIFVVPPNQKSHAIRVHRKFAVEE-GDHLTMLNIYEA 523
Query: 833 YKDAKRNRRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYSHDL 892
+ K N+ + +C E+FL+ L +R Q LL K + P + DL
Sbjct: 524 F--IKHNKDSK-WCQEHFLNYKGLVRAATVREQLKKLLV------KFQVPRKSSEGDPDL 574
Query: 893 EMVCAILCAGLYPNVVQCKRKGKRAVFYTKEVGQVALHPSSV 934
+ C + +G + N + G A ++ ++ +HP+SV
Sbjct: 575 VLRCIV--SGFFANAARFHSTG--AYRTIRDDHELHIHPASV 612
Score = 232 (86.7 bits), Expect = 3.6e-26, Sum P(2) = 3.6e-26
Identities = 88/308 (28%), Positives = 142/308 (46%)
Query: 669 RAGRVQPGVCYKLYPRIIHDAMLPYQLPEILRTPLQELCLHIKSLQLGTVG--SFLS-KA 725
RAGR K Y +A +LP+ +Q L LQL +G + L
Sbjct: 359 RAGRGGRSRSGKCYRLYTEEAF--DKLPQSTVPEMQRSNLAPVILQLKALGIDNVLRFHF 416
Query: 726 LQPPDPLAVQNAIELLKTIGALDDMENLT-PLGRHLCTLPVDPNIGKMLLMGAIFQCLNP 784
+ PP ++ A+ELL +G LD LT PLG + P++P KMLL F C
Sbjct: 417 MSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQE 476
Query: 785 ALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAKRNRRERD 844
L+IAA + +N FV+P N + R FA + DH+ +L ++ + K N+ +
Sbjct: 477 ILSIAAMMQIQNIFVVPPNQKSHAIRVHRKFAVEE-GDHLTMLNIYEAF--IKHNKDSK- 532
Query: 845 FCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYSHDLEMVCAILCAGLY 904
+C E+FL+ L +R Q LL K + P + DL + C + +G +
Sbjct: 533 WCQEHFLNYKGLVRAATVREQLKKLLV------KFQVPRKSSEGDPDLVLRCIV--SGFF 584
Query: 905 PNVVQCKRKGKRAVFYTKEVGQVALHPSSVNANQNNFPLPYMVYSEMVKTNNINVYDSTN 964
N + G A ++ ++ +HP+SV + P +++Y+E+++T+ + D T
Sbjct: 585 ANAARFHSTG--AYRTIRDDHELHIHPASVLYAEK--PPRWVIYNEVIQTSKYYMRDVTA 640
Query: 965 ISEYALLL 972
I E A LL
Sbjct: 641 I-ESAWLL 647
Score = 151 (58.2 bits), Expect = 1.0e-61, Sum P(2) = 1.0e-61
Identities = 45/144 (31%), Positives = 63/144 (43%)
Query: 336 TQPXXXXXXXXXXXXXXERGENLGETVGYQIRLES-KRSAQTRLLFCTTGVLLRQLVEDP 394
TQP ERG LG VGY IR + TR+ F T G+L+R+++ DP
Sbjct: 75 TQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLATRIKFLTDGMLVREMMVDP 134
Query: 395 DLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGNAPT 454
L+ S +++DE HER + D SAT++AD F +F T
Sbjct: 135 LLTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDADKFRDFFNQNET 194
Query: 455 ----------VHIPGLTFPVTDLF 468
+ + G TFPV D+F
Sbjct: 195 SDPARDTCVILTVEGRTFPV-DIF 217
Score = 43 (20.2 bits), Expect = 2.4e-50, Sum P(2) = 2.4e-50
Identities = 18/60 (30%), Positives = 26/60 (43%)
Query: 278 REKLPAFKMKAEFL-----KAVAENQVLVVSGETGCGKTTQLPQFILEEELS-SLRGADC 331
R+KLP FK AE + V Q V+ T G+ + +L E+ +R DC
Sbjct: 51 RQKLPVFKYLAEAGWTAEGRVVGVTQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDC 110
>POMBASE|SPAC2G11.11c [details] [associations]
symbol:prh1 "ATP-dependent RNA helicase Prh1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005730 "nucleolus" evidence=ISO;IDA] [GO:0042254 "ribosome
biogenesis" evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
PomBase:SPAC2G11.11c GO:GO:0005524 EMBL:CU329670 GO:GO:0005730
GenomeReviews:CU329670_GR GO:GO:0006397 GO:GO:0042254 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
KO:K14781 OrthoDB:EOG4F7RTB EMBL:D13249 PIR:S35546 PIR:S62466
RefSeq:NP_593091.1 ProteinModelPortal:Q03319
EnsemblFungi:SPAC2G11.11c.1 GeneID:2541750 KEGG:spo:SPAC2G11.11c
OMA:MANDTTI NextBio:20802841 Uniprot:Q03319
Length = 719
Score = 393 (143.4 bits), Expect = 1.4e-60, Sum P(2) = 1.4e-60
Identities = 121/414 (29%), Positives = 204/414 (49%)
Query: 555 GAILVFLTGWNDISKLLDQIK-VNKFL-GDPNKFLVLPLHGSMPTINQREIFDRPPPNKR 612
G ILVFLTG ++I L IK +K L + + PL S+P Q ++F N R
Sbjct: 305 GDILVFLTGQDEIEALEALIKSYSKQLPSNLPQIQACPLFASLPQEQQLQVFLPALANHR 364
Query: 613 KIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGR 672
K+VL+TNIAE+S+TI + YV+D G AK +++ L L IS+++A QR GRAGR
Sbjct: 365 KVVLSTNIAETSVTISGIRYVIDTGLAKIKQFNSKLGLESLTVQPISQSAAMQRSGRAGR 424
Query: 673 VQPGVCYKLYPRIIHDAMLPYQLPEILRTPLQELCLHIKSLQLGTVGSFLSKALQPPDPL 732
G CY++Y D + +PEI R L + L +K+ V +F + PP
Sbjct: 425 EAAGQCYRIYTEADFDKLPKETIPEIKRIDLSQAVLTLKARGQNDVINF--HYMDPPSKE 482
Query: 733 AVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGKMLLMGAIFQCLNPALTIAAAL 792
+ A+E L +IGALDD ++ LG + +P+ P++ + +L CL+ + + + L
Sbjct: 483 GLLRALEHLYSIGALDDNGHINDLGYQMSLIPLLPSLARAVLAAREHNCLSEVIDVVSCL 542
Query: 793 AHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAKRNRRERDFCWENFLS 852
+ + F+ P + E EA+ F S D + L A Y ++ + R++ +C +NF++
Sbjct: 543 STDSMFLFPQEKRDEAIEARLKFL-HSEGDLLTCLNALRQYLESSHDSRKQ-WCSQNFIN 600
Query: 853 PITLQMMEDMRSQFLD-LLSDIGFVDKSKGPSAYNRYSHDLEMVCAILCAGLYPNVVQCK 911
L+ + D+R Q + L D G+ + + P + ++ + L +G N
Sbjct: 601 RRALKTILDIRKQLREHCLKD-GW-ELNSSPEVNSE-----NLLLSFL-SGYITNTALLH 652
Query: 912 RKGKRAVFYTKEVGQVALHPSSVNANQNNFPLPYMVYSEMVKTNNINVYDSTNI 965
G + +++HPSS + + ++Y E+V T V ++I
Sbjct: 653 PDGSYRTIIGNQT--ISIHPSSSLFGKK---VEAIMYHELVFTTKSYVRGVSSI 701
Score = 309 (113.8 bits), Expect = 1.4e-60, Sum P(2) = 1.4e-60
Identities = 83/268 (30%), Positives = 129/268 (48%)
Query: 198 SIETERRVGNLLNSSQGNVPVNDSGIESSEVARRPKLSVKVANTISPPQSDSAKERLNVI 257
SI + L+ + P ++S+ + K +V V N + A E +
Sbjct: 13 SITKQNLTDGLVGGQRIKAPNKKKNRKASKNTTK-KSTVSVVNFLEQDTDFGANEVVGSD 71
Query: 258 LKERQEKLKSSDSG-KAMLSFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQ 316
+++ ++S S K +L R+ LP ++ + + +N+V+VV GETG GK+TQ+PQ
Sbjct: 72 NSSPEKRSENSPSKRKDILEQRKNLPIWEAHDTLCQQIQDNRVIVVVGETGSGKSTQIPQ 131
Query: 317 FILEEELSSLRGADCNIICTQPXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQT 376
F+ E + G C + TQP E+G LGE VGY IR + S +T
Sbjct: 132 FLNECPYAQ-EG--C-VAITQPRRVAAVNLAKRVAAEQGCRLGEQVGYSIRFDDTTSKKT 187
Query: 377 RLLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXM 436
R+ + T G+LLR+L+ DP LS L++DE HER + D M
Sbjct: 188 RIKYLTDGMLLRELINDPILSQYHTLILDEAHERTLMTDMLLGFVKKIIKKRPALRVIIM 247
Query: 437 SATINADLFSKYFGNAPTVHIPGLTFPV 464
SAT+NA+ FS++F A +I G +PV
Sbjct: 248 SATLNAERFSEFFDGAEICYISGRQYPV 275
>TAIR|locus:2197965 [details] [associations]
symbol:AT1G26370 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
IPI:IPI00532541 RefSeq:NP_173961.3 UniGene:At.15978
ProteinModelPortal:F4IE66 SMR:F4IE66 PRIDE:F4IE66
EnsemblPlants:AT1G26370.1 GeneID:839179 KEGG:ath:AT1G26370
OMA:ADISTNI Uniprot:F4IE66
Length = 717
Score = 413 (150.4 bits), Expect = 3.2e-59, Sum P(3) = 3.2e-59
Identities = 137/456 (30%), Positives = 218/456 (47%)
Query: 533 AEQIDLGLVESTIEYICRHEGDGAILVFLTGWNDISKL--LDQIKVNKFLGDPNKFLVLP 590
++ +D LV TI I E G ILVFLTG ++I + L Q ++ D K L L
Sbjct: 272 SDYVDATLV--TIFQIHFEEKPGDILVFLTGQDEIESVERLVQERLQNIPEDKRKLLPLA 329
Query: 591 LHGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKL 650
+ ++P+ Q ++F P RK++LATNIAE+SITI + YV+D G K SYD +
Sbjct: 330 IFSALPSEQQMKVFAPAPTGFRKVILATNIAETSITIPGIRYVIDPGFVKARSYDPSKGM 389
Query: 651 ACLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQLPEILRTPLQELCLHI 710
L SKA QR GRAGR PG ++LYP + + PEI R L + L +
Sbjct: 390 ESLDVVPASKAQTLQRSGRAGREGPGKSFRLYPEREFEKLEDSTKPEIKRCNLSNIILQL 449
Query: 711 KSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGAL-DDMENLTPLGRHLCTLPVDPNI 769
K+L + + F + P A+ A+ L ++GAL DD + P+G + LP++P
Sbjct: 450 KALGIDDIVGF--DFIDKPSRGAIIKALAELHSLGALADDGKLENPVGYQMSRLPLEPVY 507
Query: 770 GKMLLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKA 829
K L++ F CL L A L+ + F P ++E +K FA DH+ L
Sbjct: 508 SKALILANQFNCLEEMLITVAVLSVESIFYDPREKREEARTSKNHFASVE-GDHLTYLSV 566
Query: 830 F---DGYKDAKR-----NRRER---DFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDK 878
+ D + + ++ N ++ +C EN+++ +L+ D+ Q + + IGF
Sbjct: 567 YRESDEFLEKRKAAGSGNNIDKIMKKWCKENYVNSRSLKHARDIYRQIREHVEQIGFNVS 626
Query: 879 SKGPSAYNRYSHDLEMVCAILCAGLYPNVVQCKRKGKRAVFYTKEVGQVALHPSSVNANQ 938
S G +D+ L A + Q + G + EV V +HP+SV
Sbjct: 627 SCG--------NDMLAFRRCLAASFFLKAAQRQLDGTYRALESGEV--VHIHPTSVLFRA 676
Query: 939 NNFPLPYMVYSEMVKTN-----NINVYDSTNISEYA 969
P ++++E+++T+ N+ + DS +SE A
Sbjct: 677 K--P-ECVIFNELMQTSKKYIKNLTIIDSLWLSELA 709
Score = 227 (85.0 bits), Expect = 3.2e-59, Sum P(3) = 3.2e-59
Identities = 52/138 (37%), Positives = 72/138 (52%)
Query: 278 REKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQ 337
R LP ++ ++ V +N +L++ GETG GKTTQLPQF+ G I TQ
Sbjct: 38 RRSLPIASVEKRLVEEVQKNDILIIVGETGSGKTTQLPQFLYNAGFCR-EGKMIGI--TQ 94
Query: 338 PXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVEDPDLS 397
P E LG+ VGY IR + S TRL + T G+LLR+ + DP LS
Sbjct: 95 PRRIAAVTVAKRVAEECEVQLGQKVGYSIRFDDTTSGSTRLKYMTDGLLLREALLDPHLS 154
Query: 398 CVSHLLVDEIHERGMNED 415
S ++VDE H+R ++ D
Sbjct: 155 RYSVIIVDEAHDRSVHTD 172
Score = 90 (36.7 bits), Expect = 3.2e-59, Sum P(3) = 3.2e-59
Identities = 17/33 (51%), Positives = 24/33 (72%)
Query: 436 MSATINADLFSKYFGNAPTVHIPGLTFPVTDLF 468
MSA+++A +FS+YFG A VH+ G FPV L+
Sbjct: 234 MSASLDARVFSEYFGGAKAVHVQGRQFPVDILY 266
>POMBASE|SPAC20H4.09 [details] [associations]
symbol:SPAC20H4.09 "ATP-dependent RNA helicase,
spliceosomal (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IC;ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0005829 "cytosol" evidence=IDA] [GO:0045292 "mRNA cis splicing,
via spliceosome" evidence=ISS] [GO:0071276 "cellular response to
cadmium ion" evidence=IMP] [GO:0071585 "detoxification of cadmium
ion" evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPAC20H4.09
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 EMBL:CU329670
GO:GO:0008380 GO:GO:0071276 GO:GO:0071585 GO:GO:0006397
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 RefSeq:NP_593629.1 ProteinModelPortal:Q9HE06
EnsemblFungi:SPAC20H4.09.1 GeneID:2542874 KEGG:spo:SPAC20H4.09
OMA:NYSVIIL OrthoDB:EOG4BGD47 NextBio:20803914 Uniprot:Q9HE06
Length = 647
Score = 404 (147.3 bits), Expect = 3.7e-59, Sum P(2) = 3.7e-59
Identities = 137/440 (31%), Positives = 211/440 (47%)
Query: 541 VESTIEYICRHEGD---GAILVFLTGWNDISKLLDQIKVNKFLG--DPNKFLVLPLHGSM 595
V+S IE + G ILVFL+G +I + +I+ + D + LPLH +
Sbjct: 220 VDSAIETVININSTYPPGDILVFLSGRKEIEYCIKKIEDSLIHASEDCQTLVPLPLHAGL 279
Query: 596 PTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLP 655
Q +F+ + RK++ +TNIAE+SITID +VYVVD G K+ Y+ + + L+
Sbjct: 280 TVDEQMRVFNIYDGDFRKVIFSTNIAETSITIDGIVYVVDSGFNKQRIYNPYTRTSKLIN 339
Query: 656 SWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQLPEILRTPLQELCLHIKSLQL 715
ISK+SA QR GRAGR G ++LY + M +IL + L L +K L L
Sbjct: 340 VPISKSSAIQRSGRAGRTMRGKVFRLYTEKAYSLMKEEFEADILNCDMSPLVLFLKGLGL 399
Query: 716 GTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLT-PLGRHLCTLPVDPNIGKMLL 774
+ F ++PP + + A+E L +G LD+ NLT PLG + +D NI K LL
Sbjct: 400 KNILQF-PFFVRPPT-VHLMAALEDLYLLGVLDESGNLTDPLGIQISNSFLDANISKALL 457
Query: 775 MGAIFQCLNPALTIAAALAHRNPFVLPVNMQK-EVDEAKRSFAGDSCSDHIALLKAFDGY 833
F C + L+IA+ L F P + K + A SF + D I L F+ +
Sbjct: 458 TSNQFGCTHEILSIASILTAGEVFYNPTSSSKNDAFVAHSSFFANE-GDIITALNVFESF 516
Query: 834 KDAKRNRRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYSHDLE 893
N+++ +C +N+L+ TL+ D+R+ + F++K P+A S D
Sbjct: 517 VG---NKKDLQWCRKNYLNYQTLRQALDIRTHL------VRFLNKFSIPTAQRLPSSDCS 567
Query: 894 MVCAILCAGLYPNVVQCKRKGKRAVFYTKEVG--QVALHPSSVNANQNNFPLPYMVYSEM 951
+ L G NV + G Y K +G QV L SSV + P+++YS
Sbjct: 568 KILKCLLDGFVRNVAHLQNDGS----Y-KTIGGKQVWLDSSSVLHEKKT---PWIMYSSA 619
Query: 952 VKTNN-INVYDSTNISEYAL 970
V++ I V + + I + L
Sbjct: 620 VESETQIFVKNISKIESFWL 639
Score = 279 (103.3 bits), Expect = 3.7e-59, Sum P(2) = 3.7e-59
Identities = 68/203 (33%), Positives = 102/203 (50%)
Query: 275 LSFREKL-PAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNI 333
L+ ++KL P K + + L AV +NQ+ +V G TGCGKTTQ+PQF+ E +S G I
Sbjct: 18 LNIQKKLLPITKYRNQLLYAVEQNQITIVLGHTGCGKTTQIPQFLYEAGWASQNGI---I 74
Query: 334 ICTQPXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVED 393
CTQP E G GY I+ + S +T++ + T G+LL ++ D
Sbjct: 75 GCTQPRRLVAKSVSERVSLELNSPPGSLCGYSIQFDHNVSEKTKIKYMTDGILLNEIFFD 134
Query: 394 PDLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGNAP 453
P L S +++DE+HER ++ D SA+++A+ S++FG
Sbjct: 135 PLLERYSIVILDEVHERTLSTDLLLGVLKRILEKRNDFRLVLSSASVDANKLSQFFGQDK 194
Query: 454 --TVHIPGLTFPVTDLFLEDVLE 474
T+ I G FPV LFL+ E
Sbjct: 195 VCTMSIEGKLFPVETLFLQKPTE 217
>UNIPROTKB|I3L1L6 [details] [associations]
symbol:DHX33 "Putative ATP-dependent RNA helicase DHX33"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AC004148 HGNC:HGNC:16718 ChiTaRS:DHX33
Ensembl:ENST00000572490 Uniprot:I3L1L6
Length = 617
Score = 486 (176.1 bits), Expect = 7.4e-59, Sum P(2) = 7.4e-59
Identities = 135/410 (32%), Positives = 207/410 (50%)
Query: 557 ILVFLTGWNDISKLLDQIK-VNKFLGDP-NKFLVLPLHGSMPTINQREIFDRPPPNKRKI 614
ILVFLTG +I + + + K L D LVLPL+ S+P Q +F P RK+
Sbjct: 201 ILVFLTGQEEIEAMSKTCRDIAKHLPDGCPAMLVLPLYASLPYAQQLRVFQGAPKGYRKV 260
Query: 615 VLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQ 674
+++TNIAE+SITI + YVVD G K Y+ + L L +SK A QR GRAGR
Sbjct: 261 IISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRTGRAGRED 320
Query: 675 PGVCYKLYPRIIHDAMLPYQLPEILRTPLQELCLHIKSLQLGTVGSFLSKALQPPDPLAV 734
G+CY+LY + +PEI R L + L + ++++ V +F + P P +
Sbjct: 321 SGICYRLYTEDEFEKFDKMTVPEIQRCNLASVMLQLLAMKVPNVLTF--DFMSKPSPDHI 378
Query: 735 QNAIELLKTIGAL---DDMENLTPLGRHLCTLPVDPNIGKMLLMGAIFQCLNPALTIAAA 791
Q AI L +GAL DD LTP+GR + P++P K +LM F C LTI +
Sbjct: 379 QAAIAQLDLLGALEHKDDQLTLTPMGRKMAAFPLEPKFAKTILMSPKFHCTEEILTIVSL 438
Query: 792 LAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAKRNRRERDFCWENFL 851
L+ + P + ++EV ++ F DH+ LL + +K+ N+ D+C ENF+
Sbjct: 439 LSVDSVLHNPPSRREEVQGVRKKFISSE-GDHMTLLNIYRTFKNLGGNK---DWCKENFV 494
Query: 852 SPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYSHDLEMVCAILCAGLYPNVVQCK 911
+ + ++ ++R+Q D+ K P A +R D+E V L L+ + + +
Sbjct: 495 NSKNMTLVAEVRAQLRDICL------KMSMPIASSR--GDVESVRRCLAHSLFMSTAELQ 546
Query: 912 RKGKRAVFYTKEVGQVALHPSSVNANQNNFPLPYMVYSEMVKTNNINVYD 961
G A T + VA+HPSSV + P +VY+E++ TN + D
Sbjct: 547 PDGTYATTDTHQ--PVAIHPSSVLFHCK--PA-CVVYTELLYTNKCYMRD 591
Score = 154 (59.3 bits), Expect = 7.4e-59, Sum P(2) = 7.4e-59
Identities = 36/109 (33%), Positives = 55/109 (50%)
Query: 361 TVGYQIRLESKRSAQTRLLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFXXXX 420
+VGY +R + S TR+ F T G+LLR+ + D L S +++DE HER ++ D
Sbjct: 60 SVGYTVRFDDVTSEDTRIKFLTDGMLLREAISDSLLRKYSCVILDEAHERTIHTDVLFGV 119
Query: 421 XXXXXXXXXXXXXX-----XMSATINADLFSKYFGNAPTVHIPGLTFPV 464
MSAT++ DLFS+YF AP +++ G P+
Sbjct: 120 VKAAQKRRKELGKLPLKVIVMSATMDVDLFSQYFNGAPVLYLEGRQHPI 168
Score = 37 (18.1 bits), Expect = 5.3e-06, Sum P(2) = 5.3e-06
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 918 VFYTKEVGQVALHPSSVNANQ 938
VFYTK+ LH + V+ Q
Sbjct: 170 VFYTKQPQNDYLHAALVSVFQ 190
>UNIPROTKB|Q8IX18 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOVERGEN:HBG039428 EMBL:AF461690 EMBL:AF260270
EMBL:AK025713 EMBL:AK095681 EMBL:BC024187 EMBL:AL832510
EMBL:AF319521 IPI:IPI00410110 IPI:IPI00797226 IPI:IPI01010408
RefSeq:NP_001159773.1 RefSeq:NP_078888.4 UniGene:Hs.29403
ProteinModelPortal:Q8IX18 SMR:Q8IX18 IntAct:Q8IX18 STRING:Q8IX18
PhosphoSite:Q8IX18 DMDM:116247771 PaxDb:Q8IX18 PRIDE:Q8IX18
DNASU:79665 Ensembl:ENST00000251241 GeneID:79665 KEGG:hsa:79665
UCSC:uc002ixn.2 CTD:79665 GeneCards:GC17P057642 HGNC:HGNC:18018
HPA:HPA044350 MIM:607570 neXtProt:NX_Q8IX18 PharmGKB:PA27227
InParanoid:Q8IX18 OMA:LYGSMPT PhylomeDB:Q8IX18 ChiTaRS:DHX40
GenomeRNAi:79665 NextBio:68866 ArrayExpress:Q8IX18 Bgee:Q8IX18
CleanEx:HS_DHX40 Genevestigator:Q8IX18 GermOnline:ENSG00000108406
Uniprot:Q8IX18
Length = 779
Score = 408 (148.7 bits), Expect = 1.4e-58, Sum P(2) = 1.4e-58
Identities = 131/432 (30%), Positives = 215/432 (49%)
Query: 540 LVESTIEYICRHEGDGAILVFLTGWNDISK---LLDQ----IKVNKFLGDP--NKFLVLP 590
+V+ T++ I +E G ILVFLTG +I K LL Q + + + D + L+LP
Sbjct: 259 IVKVTMD-IHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILP 317
Query: 591 LHGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKL 650
+GSM T QR IF PPP RK V++TNI+ +S+TID + YVVD G K+ +++ L
Sbjct: 318 CYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGL 377
Query: 651 ACLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLP-YQLPEILRTPLQELCLH 709
L ISK+ A QR GRAGR G C+++Y + + +P + +PEI RT L + L
Sbjct: 378 DILEVVPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLT 437
Query: 710 IKSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNI 769
+K L + V F L PP+ + A++ L A+D ++T LG + P+ P++
Sbjct: 438 LKCLAIHDVIRF--PYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHL 495
Query: 770 GKMLLMGAIFQCLNPALTIAAALAHRNPFVLPVN--MQKEVDEAKRSFAGDSCS-DHIAL 826
++ A C + L IAA L+ N F+ PV+ QKE ++ R A + + A
Sbjct: 496 TCAVIKAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRELAAKAGGFNDFAT 555
Query: 827 LKAFDGYKDAKRNRRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPS-AY 885
L ++ K + +C ++++ L + +Q +L+ + +S P +
Sbjct: 556 LAVI--FEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLK--QQSDFPKETF 611
Query: 886 NRYSHDLEMVCAILCAGLYPNVVQCKRKGKRAVFYTKEVGQVALHPSSVNANQNNFPLPY 945
H++ C LCAG + NV + + G+ V +HPSS Q L +
Sbjct: 612 EGPKHEVLRRC--LCAGYFKNVAR-RSVGRTFCTMDGRGSPVHIHPSSALHEQET-KLEW 667
Query: 946 MVYSEMVKTNNI 957
+++ E++ T +
Sbjct: 668 IIFHEVLVTTKV 679
Score = 276 (102.2 bits), Expect = 1.4e-58, Sum P(2) = 1.4e-58
Identities = 73/227 (32%), Positives = 109/227 (48%)
Query: 248 DSAKERLNVI-LKERQEKLKSSDSGKAMLSFREKLPAFKMKAEFLKAVAENQVLVVSGET 306
D +ERL+ + + +R+EK +S G +F P K + + ++AV +N L+V+G T
Sbjct: 23 DLQEERLSAVCIADREEKGCTSQEGGTTPTF----PIQKQRKKIIQAVRDNSFLIVTGNT 78
Query: 307 GCGKTTQLPQFILEEELSSLRGADCNIICTQPXXXXXXXXXXXXXXERGENLGETVGYQI 366
G GKTTQLP+++ E S G I TQP E LG VGYQ+
Sbjct: 79 GSGKTTQLPKYLYEAGFSQ-HGM---IGVTQPRKVAAISVAQRVAEEMKCTLGSKVGYQV 134
Query: 367 RLESKRSAQTRLLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFXXXXXXXXXX 426
R + S +T + + T G LL+ ++ DP+L+ S +++DE HER + D
Sbjct: 135 RFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQ 194
Query: 427 XXX-----XXXXXXMSATINADLFSKYFGNAPTVHIPGLTFPVTDLF 468
MSAT+ S +FGN P IPG +PV + F
Sbjct: 195 EKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKF 241
>CGD|CAL0004556 [details] [associations]
symbol:orf19.2090 species:5476 "Candida albicans" [GO:0030686
"90S preribosome" evidence=IEA] [GO:0032040 "small-subunit
processome" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0000462 "maturation
of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 CGD:CAL0004556 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AACQ01000031
EMBL:AACQ01000030 KO:K14780 RefSeq:XP_719536.1 RefSeq:XP_719660.1
STRING:Q5ACX7 GeneID:3638741 GeneID:3638820 KEGG:cal:CaO19.2090
KEGG:cal:CaO19.9637 Uniprot:Q5ACX7
Length = 1263
Score = 454 (164.9 bits), Expect = 3.8e-58, Sum P(5) = 3.8e-58
Identities = 102/301 (33%), Positives = 171/301 (56%)
Query: 588 VLPLHGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDAL 647
VLPL+ +PT Q ++F+ PPP R ++ATN+AE+S+TI + YVVDCG++KE Y+
Sbjct: 773 VLPLYSLLPTKQQMKVFEDPPPGSRICIVATNVAETSLTIPGIRYVVDCGRSKERKYNQE 832
Query: 648 NKLACLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLP-YQLPEILRTPLQEL 706
N + W+SKASA+QR GRAGR PG CY+LY + + P + +PEILR P + +
Sbjct: 833 NGVQSFEVDWVSKASANQRAGRAGRTGPGHCYRLYSSAVFEDFFPQFSVPEILRMPFESI 892
Query: 707 CLHIKSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALD-DMENLTPLGRHLCTLPV 765
L +KS+ + + +F PPD +++ A ELL +GALD + + +T LG+ + P+
Sbjct: 893 VLSMKSMGIDQIANFPFPT--PPDRFSLKKAEELLVILGALDKEQKQITDLGKKMSLFPL 950
Query: 766 DPNIGKMLLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEV-DEAKRSFAG------- 817
P K+L++G +CL+ + I +AL+ +PF+ + + DEA+R F
Sbjct: 951 SPRFAKILIIGNQQECLSYIIAIVSALSVGDPFIGENELVGNMNDEARREFRTKFYHSRA 1010
Query: 818 -----DSCSDHIALLKAFDGYKDAKRNRRERDFCWENFLSPITLQMMEDMRSQFLDLLSD 872
D+ S+ + LL A Y D + F +++L ++ ++ +R Q +++ +
Sbjct: 1011 LFSKLDASSNCMMLLSAVCAY-DHVPKEEQNGFLQKHYLRHKMMEEIQKLRKQVGNIVEN 1069
Query: 873 I 873
+
Sbjct: 1070 M 1070
Score = 203 (76.5 bits), Expect = 3.8e-58, Sum P(5) = 3.8e-58
Identities = 53/145 (36%), Positives = 77/145 (53%)
Query: 278 REKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSL-RGADCNII-C 335
R LP F + ++AV + +++ GETG GKTTQ+PQF+ E +L +I
Sbjct: 440 RALLPVFAEEHRIMEAVYHHDCIILCGETGSGKTTQVPQFLYEAGFGNLLHDLYPGMIGV 499
Query: 336 TQPXXXXXXXXXXXXXXERGENLGETVGYQIRLES--KRSAQ---TRLLFCTTGVLLRQL 390
TQP E G++ G VGYQIR ++ K + T L F T GVLLR++
Sbjct: 500 TQPRRVAAVSMAERVGSELGDH-GHRVGYQIRFDTTIKNEGKENGTALKFMTDGVLLREM 558
Query: 391 VEDPDLSCVSHLLVDEIHERGMNED 415
+ D L+ S +++DE HER +N D
Sbjct: 559 MTDFLLAKYSAIIIDEAHERNINTD 583
Score = 62 (26.9 bits), Expect = 3.8e-58, Sum P(5) = 3.8e-58
Identities = 14/49 (28%), Positives = 23/49 (46%)
Query: 927 VALHPSSVNANQNNFPLPYMVYSEMVKTNNINVYDSTNISEYALLLFGG 975
V LHP+S+ A P Y+VY + NI+ ++ + L+ G
Sbjct: 1144 VYLHPNSLIAESGQIPSSYLVYQSLSTKGNISEDETKKVRMNPLVDISG 1192
Score = 60 (26.2 bits), Expect = 3.8e-58, Sum P(5) = 3.8e-58
Identities = 13/38 (34%), Positives = 24/38 (63%)
Query: 541 VESTIEYICR-HEG--DGAILVFLTGWNDISKLLDQIK 575
+E + C+ H +G IL+FLTG N+I+ L+ +++
Sbjct: 660 LEEAFKKTCKIHRKLPEGGILIFLTGQNEITTLVKKLR 697
Score = 42 (19.8 bits), Expect = 3.8e-58, Sum P(5) = 3.8e-58
Identities = 13/46 (28%), Positives = 22/46 (47%)
Query: 104 ERLRQQAAEMEVFDQNEWWGKLEQMKRGEEQEMIIKRKFSRADQQT 149
E+L + + F + GK +Q K+ E E + + RAD+ T
Sbjct: 115 EKLAETKMDTSNFAALKELGKGKQTKKEEMIEALELERQGRADENT 160
Score = 40 (19.1 bits), Expect = 2.0e-39, Sum P(3) = 2.0e-39
Identities = 9/33 (27%), Positives = 19/33 (57%)
Query: 103 AERLRQQAAEMEVFDQNEWWGKLEQMKRGEEQE 135
+E ++Q+ +++ Q+ G L+ + GEE E
Sbjct: 719 SENVQQEVEDVDFSVQSGDAGILDDYEEGEENE 751
>FB|FBgn0003483 [details] [associations]
symbol:spn-E "spindle E" species:7227 "Drosophila
melanogaster" [GO:0007315 "pole plasm assembly" evidence=NAS]
[GO:0030720 "oocyte localization involved in germarium-derived egg
chamber formation" evidence=IMP] [GO:0030717 "karyosome formation"
evidence=IMP] [GO:0009951 "polarity specification of dorsal/ventral
axis" evidence=IMP] [GO:0048477 "oogenesis" evidence=IGI;TAS]
[GO:0009949 "polarity specification of anterior/posterior axis"
evidence=IMP] [GO:0007294 "germarium-derived oocyte fate
determination" evidence=IGI] [GO:0008298 "intracellular mRNA
localization" evidence=IMP;TAS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0008186 "RNA-dependent ATPase
activity" evidence=TAS] [GO:0006403 "RNA localization"
evidence=TAS] [GO:0005737 "cytoplasm" evidence=IDA;NAS] [GO:0003724
"RNA helicase activity" evidence=TAS] [GO:0004386 "helicase
activity" evidence=ISS] [GO:0009994 "oocyte differentiation"
evidence=NAS] [GO:0001556 "oocyte maturation" evidence=IMP]
[GO:0030423 "targeting of mRNA for destruction involved in RNA
interference" evidence=IMP] [GO:0045451 "pole plasm oskar mRNA
localization" evidence=IMP] [GO:0006342 "chromatin silencing"
evidence=IMP] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0007317 "regulation of pole plasm oskar
mRNA localization" evidence=IMP] [GO:0016246 "RNA interference"
evidence=TAS] [GO:0005634 "nucleus" evidence=IDA] [GO:0046843
"dorsal appendage formation" evidence=IMP] [GO:0010529 "negative
regulation of transposition" evidence=IMP] [GO:0043186 "P granule"
evidence=IDA] [GO:0060213 "positive regulation of
nuclear-transcribed mRNA poly(A) tail shortening" evidence=IMP]
[GO:0007076 "mitotic chromosome condensation" evidence=IMP]
InterPro:IPR001650 InterPro:IPR007087 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00355 SMART:SM00490
SMART:SM00847 InterPro:IPR002999 EMBL:AE014297 GO:GO:0005524
GO:GO:0005634 GO:GO:0007126 GO:GO:0009949 GO:GO:0007294
GO:GO:0008270 GO:GO:0007283 GO:GO:0003676 GO:GO:0006342
GO:GO:0030423 Pfam:PF00567 SMART:SM00333 PROSITE:PS50304
GO:GO:0007076 GO:GO:0001556 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0046843 GO:GO:0030720 GO:GO:0030717
eggNOG:COG1643 GeneTree:ENSGT00700000104393 GO:GO:0060213
GO:GO:0008026 GO:GO:0045451 GO:GO:0003724 GO:GO:0043186
GO:GO:0007317 GO:GO:0008186 GO:GO:0009951 EMBL:S79915 EMBL:BT029921
EMBL:BT100306 PIR:T13889 RefSeq:NP_476741.1 UniGene:Dm.21664
ProteinModelPortal:Q9VF26 SMR:Q9VF26 STRING:Q9VF26 PaxDb:Q9VF26
PRIDE:Q9VF26 EnsemblMetazoa:FBtr0083183 GeneID:41919
KEGG:dme:Dmel_CG3158 UCSC:CG3158-RA CTD:41919 FlyBase:FBgn0003483
InParanoid:Q9VF26 OMA:INDWFTI OrthoDB:EOG4V6WXM PhylomeDB:Q9VF26
GenomeRNAi:41919 NextBio:826268 Bgee:Q9VF26 Uniprot:Q9VF26
Length = 1434
Score = 406 (148.0 bits), Expect = 4.1e-58, Sum P(2) = 4.1e-58
Identities = 116/373 (31%), Positives = 186/373 (49%)
Query: 555 GAILVFLTGWNDISKLLDQIKVNKFLGDPN-KFLVLPLHGSMPTINQREIFDRPPPNKRK 613
GA+L+FL G +I + + + DPN K ++ M NQR++F+ PPP RK
Sbjct: 366 GAVLIFLPGIYEIDTMAENLTC-MLENDPNIKVSIVRCFSLMTPENQRDVFNPPPPGFRK 424
Query: 614 IVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRV 673
I+L TNIAESSIT+ DV YV+D AK D + + L +W SKA+ QR GR GR+
Sbjct: 425 IILTTNIAESSITVPDVSYVIDFCLAKVKVTDTASSFSSLRLTWASKANCRQRAGRVGRL 484
Query: 674 QPGVCYKLYPRIIHDAMLP-YQLPEILRTPLQELCLHIKSLQLGTVGSFLSKALQPPDPL 732
+ G Y++ + + +P + +PE+LR PLQ L K L +G+ L+ AL PP+
Sbjct: 485 RSGRVYRMVNKHFYQREMPEFGIPEMLRLPLQNSVLKAKVLNMGSPVEILALALSPPNLS 544
Query: 733 AVQNAIELLKTIGAL--------DDME-NLTPLGRHLCTLPVDPNIGKMLLMGAIFQCLN 783
+ N I LLK +GAL D ++ +LT G + LP+D +++++G IF L
Sbjct: 545 DIHNTILLLKEVGALYLTVDGIYDPLDGDLTYWGTIMSRLPLDTRQSRLIILGYIFNMLE 604
Query: 784 PALTIAAALAHRNPFVLPVNMQKEVDE--AKRSFAGDSCSDHIALLKAFDGYKDAKRNRR 841
A+ IAA L+ F + D F+ S SD +A+ + + Y + N
Sbjct: 605 EAIIIAAGLSTPGLFAHEGGRSQLGDSFWMHYIFSDGSGSDLVAIWRVYLTYLNIVENGH 664
Query: 842 ERDFC--WENFLSPITLQMMEDMRSQFLDL---LSDIGFVDKSKGPSAYNRYSHDLE--- 893
+++ W ++L+ ++++ +L + +G + P N+ D E
Sbjct: 665 DQESAIRWAKRFH-VSLRSLKEIHLLVQELRVRCTHLGLIPFPVNP---NQMMDDREKAI 720
Query: 894 MVCAILCAGLYPN 906
M+ I+ YPN
Sbjct: 721 MLKVIIAGAFYPN 733
Score = 285 (105.4 bits), Expect = 4.1e-58, Sum P(2) = 4.1e-58
Identities = 66/175 (37%), Positives = 91/175 (52%)
Query: 278 REK-LPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICT 336
R+K L + + E L A+ + V+++ GETGCGKTTQ+PQ+IL+E S G CNI+ T
Sbjct: 111 RDKNLSIYAKREEILAAINAHPVVIIKGETGCGKTTQVPQYILDEAYKS--GKYCNIVVT 168
Query: 337 QPXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQ-TRLLFCTTGVLLRQLVEDPD 395
QP ER +Q+ L S + TRLL+CTTGVLL L+ +
Sbjct: 169 QPRRIAAISIANRVCQEREWQQNTVCSFQVGLHRPNSLEDTRLLYCTTGVLLNNLINNKT 228
Query: 396 LSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXX-MSATINADLFSKYF 449
L+ +H+++DE+HER N DF MSATI+A S YF
Sbjct: 229 LTHYTHIVLDEVHERDQNMDFLLIVVRRLLATNSRHVKIILMSATIDAKELSDYF 283
>UNIPROTKB|C3XYZ4 [details] [associations]
symbol:BRAFLDRAFT_65715 "Putative uncharacterized protein"
species:7739 "Branchiostoma floridae" [GO:0005634 "nucleus"
evidence=ISS] [GO:0007140 "male meiosis" evidence=ISS] [GO:0007283
"spermatogenesis" evidence=ISS] [GO:0009566 "fertilization"
evidence=ISS] [GO:0034587 "piRNA metabolic process" evidence=ISS]
[GO:0043046 "DNA methylation involved in gamete generation"
evidence=ISS] [GO:0071547 "piP-body" evidence=ISS]
InterPro:IPR001650 InterPro:IPR007087 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00028 PROSITE:PS51194 SMART:SM00355
SMART:SM00490 SMART:SM00847 InterPro:IPR002999 GO:GO:0005524
GO:GO:0005634 GO:GO:0008270 GO:GO:0009566 GO:GO:0007283
GO:GO:0003676 GO:GO:0007140 Pfam:PF00567 GO:GO:0043046
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0034587
GO:GO:0008026 GO:GO:0071547 OMA:INDWFTI EMBL:GG666475
RefSeq:XP_002610548.1 GeneID:7220579 KEGG:bfo:BRAFLDRAFT_65715
eggNOG:NOG270748 Uniprot:C3XYZ4
Length = 1475
Score = 328 (120.5 bits), Expect = 6.0e-58, Sum P(3) = 6.0e-58
Identities = 73/206 (35%), Positives = 110/206 (53%)
Query: 276 SFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIIC 335
++ LP + E + V N V V+ G+TG GKTTQ+PQ+IL+ + R CNI+
Sbjct: 137 TYNPTLPITGYQEEIITTVESNSVTVIQGDTGSGKTTQVPQYILDHYARANRW--CNIVV 194
Query: 336 TQPXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVEDPD 395
TQP ERG LG VGYQ+ ++ ++S TRL F TTGVLL++L+ +
Sbjct: 195 TQPRRIAAISIARRVADERGWRLGGIVGYQVGMDKQQSEDTRLSFVTTGVLLQKLINTKN 254
Query: 396 LSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXX-MSATINADLFSKYF----- 449
++ +H+++DE+HER DF MSAT+++ +F+ YF
Sbjct: 255 MNQFTHVILDEVHERDQETDFALLVARKLLRSNSRHVKVVLMSATLDSSMFAGYFSIPVR 314
Query: 450 GN---APTVHIPGLTFPVTDLFLEDV 472
G AP V + G FPVT+ ++ED+
Sbjct: 315 GELAPAPVVTVEGRLFPVTEFYVEDL 340
Score = 253 (94.1 bits), Expect = 6.0e-58, Sum P(3) = 6.0e-58
Identities = 58/145 (40%), Positives = 87/145 (60%)
Query: 555 GAILVFLTGWNDISKLLDQIKVNKFLGDPNKFLVLPLHGSMPTINQREIFDRPPPNKRKI 614
G +LVFL G +I+ L D++ ++ K VLPLH ++ + Q ++F P P++RK+
Sbjct: 392 GTVLVFLPGLAEINTL-DELLAHETTR--YKLWVLPLHSTITSEEQAQVFVPPRPHQRKV 448
Query: 615 VLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQ 674
+L+TNIAESSIT+ D+ YV+D K D L +W S+A+ QR+GRAGRV
Sbjct: 449 ILSTNIAESSITVPDIKYVIDFCLTKCMVCDPETNYQSLQLNWASQANCTQRKGRAGRVS 508
Query: 675 PGVCYKLYPRIIHDAMLP-YQLPEI 698
G Y++ R +D LP Y +PE+
Sbjct: 509 SGRAYRMVSREFYDIHLPEYGIPEM 533
Score = 163 (62.4 bits), Expect = 6.0e-58, Sum P(3) = 6.0e-58
Identities = 48/168 (28%), Positives = 85/168 (50%)
Query: 752 NLTPLGRHLCTLPVDPNIGKMLLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEA 811
+LT +GR L LPVD +GK+LL+G +F L L I A+L+ ++ F P E +
Sbjct: 552 DLTFIGRVLAALPVDVRVGKLLLLGHVFGYLKEVLVIGASLSLKSFFAKPFRGDLESYRS 611
Query: 812 KRSFAGDSCSDHIALLKAFDGYKDAK-----RNRR-ERDFCWENFLSPITLQMMEDMRSQ 865
K +++ + SD +A+L A+ ++D RNR+ E ++ N L ++ M + +
Sbjct: 612 KMAWSEGTFSDCLAMLNAYKKWQDCCQAGMFRNRQQELEWAKRNMLQLKRMKEMSAVAKE 671
Query: 866 FLDLLSDIGF-VDKSKGPSA-YNRYSHDLEMVCAILCAG-LYPNVVQC 910
D L++ V + P ++R + ++ ++ AG YPN C
Sbjct: 672 LQDRLANFNIRVSLERNPLVNHSRDTSQDNLILKMVLAGAFYPNYFTC 719
>UNIPROTKB|F1S235 [details] [associations]
symbol:LOC100519272 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 OMA:LYGSMPT EMBL:CU694896
RefSeq:XP_003131712.1 Ensembl:ENSSSCT00000019229 GeneID:100519272
KEGG:ssc:100519272 Uniprot:F1S235
Length = 779
Score = 408 (148.7 bits), Expect = 7.9e-58, Sum P(2) = 7.9e-58
Identities = 131/432 (30%), Positives = 215/432 (49%)
Query: 540 LVESTIEYICRHEGDGAILVFLTGWNDISK---LLDQ----IKVNKFLGDP--NKFLVLP 590
+V+ T++ I +E G ILVFLTG +I K LL Q + + + D + L+LP
Sbjct: 259 IVKVTMD-IHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILP 317
Query: 591 LHGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKL 650
+GSM T QR IF PPP RK V++TNI+ +S+TID + YVVD G K+ +++ L
Sbjct: 318 CYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGL 377
Query: 651 ACLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLP-YQLPEILRTPLQELCLH 709
L ISK+ A QR GRAGR G C+++Y + + +P + +PEI RT L + L
Sbjct: 378 DILEVVPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLT 437
Query: 710 IKSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNI 769
+K L + V F L PP+ + A++ L A+D ++T LG + P+ P++
Sbjct: 438 LKCLAIHDVIRF--PYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHL 495
Query: 770 GKMLLMGAIFQCLNPALTIAAALAHRNPFVLPVN--MQKEVDEAKRSFAGDSCS-DHIAL 826
++ A C + L IAA L+ N F+ PV+ QKE ++ R A + + A
Sbjct: 496 TCAVIKAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRELAAKAGGFNDFAT 555
Query: 827 LKAFDGYKDAKRNRRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGP-SAY 885
L ++ K + +C ++++ L + +Q +L+ + +S P +
Sbjct: 556 LAVI--FEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLK--QQSDFPRETF 611
Query: 886 NRYSHDLEMVCAILCAGLYPNVVQCKRKGKRAVFYTKEVGQVALHPSSVNANQNNFPLPY 945
H++ C LCAG + NV + + G+ V +HPSS Q L +
Sbjct: 612 EGPKHEVLRRC--LCAGYFKNVAR-RSVGRTFCTMDGRGSPVHIHPSSALHEQET-KLEW 667
Query: 946 MVYSEMVKTNNI 957
+++ E++ T +
Sbjct: 668 IIFHEVLVTTKV 679
Score = 269 (99.8 bits), Expect = 7.9e-58, Sum P(2) = 7.9e-58
Identities = 72/227 (31%), Positives = 108/227 (47%)
Query: 248 DSAKERLNVI-LKERQEKLKSSDSGKAMLSFREKLPAFKMKAEFLKAVAENQVLVVSGET 306
D +ER + + + +R+EK +S G +F P K + + ++AV +N L+V+G T
Sbjct: 23 DLQEERPSAVTIADREEKGCTSQEGGTTPTF----PIQKQRKKLIQAVRDNSFLIVTGNT 78
Query: 307 GCGKTTQLPQFILEEELSSLRGADCNIICTQPXXXXXXXXXXXXXXERGENLGETVGYQI 366
G GKTTQLP+++ E S G I TQP E LG VGYQ+
Sbjct: 79 GSGKTTQLPKYLYEAGFSQ-HGM---IGVTQPRKVAAISVAQRVAEEMKCTLGSKVGYQV 134
Query: 367 RLESKRSAQTRLLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFXXXXXXXXXX 426
R + S +T + + T G LL+ ++ DP+L+ S +++DE HER + D
Sbjct: 135 RFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQ 194
Query: 427 XXX-----XXXXXXMSATINADLFSKYFGNAPTVHIPGLTFPVTDLF 468
MSAT+ S +FGN P IPG +PV + F
Sbjct: 195 EKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKF 241
>UNIPROTKB|F1MVJ1 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9913 "Bos taurus" [GO:0071013 "catalytic
step 2 spliceosome" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00700000104421 OMA:PSRSTWE
IPI:IPI00690755 EMBL:DAAA02046748 EMBL:DAAA02046749
Ensembl:ENSBTAT00000045480 ArrayExpress:F1MVJ1 Uniprot:F1MVJ1
Length = 1226
Score = 351 (128.6 bits), Expect = 8.3e-58, Sum P(3) = 8.3e-58
Identities = 78/212 (36%), Positives = 111/212 (52%)
Query: 258 LKERQEKLKSSDSGKAMLSFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQF 317
+K++ E K++L R+ LP F ++ E L + +N +++V GETG GKTTQL Q+
Sbjct: 509 MKKKSEASSEFAKKKSILEQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQY 568
Query: 318 ILEEELSSLRGADCNII-CTQPXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQT 376
+ E+ + D +I CTQP E G NLGE VGY IR E S T
Sbjct: 569 LHEDGYT-----DYGMIGCTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSEST 623
Query: 377 RLLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXM 436
+ + T G+LLR+ + + DL S +++DE HER +N D
Sbjct: 624 LIKYMTDGILLRESLREADLDHYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVT 683
Query: 437 SATINADLFSKYFGNAPTVHIPGLTFPVTDLF 468
SAT++A+ F+ +FGN P HIPG TFPV LF
Sbjct: 684 SATMDAEKFASFFGNVPIFHIPGRTFPVDILF 715
Score = 350 (128.3 bits), Expect = 8.3e-58, Sum P(3) = 8.3e-58
Identities = 96/319 (30%), Positives = 163/319 (51%)
Query: 555 GAILVFLTGWNDISKLLDQIKVN-KFLGDPNKFLVLPLHGSMPTINQREIFDRPPPNKRK 613
G IL+F+ G DI DQI + + L + VLP++ +P+ Q +IF + P RK
Sbjct: 741 GDILIFMPGQEDIEVTSDQIVEHLEELENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRK 800
Query: 614 IVLATNIAESSITIDDVVYVVDCGKAK-ETSYDALNKLACLLPSWISKASAHQRRGRAGR 672
++ATNIAE+S+T+D +++V+D G K + S +L + I K + G +G
Sbjct: 801 CIVATNIAETSLTVDGIMFVIDSGYCKLKVSSPSLGGSDLKIME-IQKIQKNINTGCSGC 859
Query: 673 VQPGVCYKLYPRIIH-DAMLPYQLPEILRTPLQELCLHIKSLQLGTVGSFLSKALQPPDP 731
P C +LY + + + +L +PEI RT L + L +KSL + + F + PP
Sbjct: 860 TSPRCC-RLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQF--HFMDPPPE 916
Query: 732 LAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGKMLLMGAIFQCLNPALTIAAA 791
+ N++ L +GALD+ LT GR + P+DP + KML++ C + L I +
Sbjct: 917 DNMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSM 976
Query: 792 LAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAKRNRRERDFCWENFL 851
L+ F P ++E D+ + FA SDH++ L Y K N +C ++F+
Sbjct: 977 LSVPAIFYRPKGREEESDQIREKFAVPE-SDHLSYLNV---YLQWKNNNYSTIWCNDHFI 1032
Query: 852 SPITLQMMEDMRSQFLDLL 870
++ + ++R+Q D++
Sbjct: 1033 HAKAMRKVREVRAQLKDIM 1051
Score = 37 (18.1 bits), Expect = 8.3e-58, Sum P(3) = 8.3e-58
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 259 KERQEKLKSSDSGKAMLS 276
KER+EK D K+ +S
Sbjct: 60 KEREEKDDGEDKKKSRIS 77
>UNIPROTKB|P43329 [details] [associations]
symbol:hrpA species:83333 "Escherichia coli K-12"
[GO:0004386 "helicase activity" evidence=IEA;IMP] [GO:0009451 "RNA
modification" evidence=IMP] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0006397 "mRNA processing"
evidence=IMP] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006397 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:D42105
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
GO:GO:0009451 PIR:H64892 RefSeq:NP_415931.4 RefSeq:YP_489680.1
ProteinModelPortal:P43329 SMR:P43329 DIP:DIP-9937N IntAct:P43329
MINT:MINT-1229564 PRIDE:P43329 EnsemblBacteria:EBESCT00000000014
EnsemblBacteria:EBESCT00000015011 GeneID:12932513 GeneID:948444
KEGG:ecj:Y75_p1389 KEGG:eco:b1413 PATRIC:32118112 EchoBASE:EB2772
EcoGene:EG12936 HOGENOM:HOG000247272 KO:K03578 OMA:TYQFEPG
ProtClustDB:PRK11131 BioCyc:EcoCyc:G6732-MONOMER
BioCyc:ECOL316407:JW5905-MONOMER Genevestigator:P43329
InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967 Uniprot:P43329
Length = 1300
Score = 425 (154.7 bits), Expect = 9.9e-58, Sum P(3) = 9.9e-58
Identities = 115/365 (31%), Positives = 197/365 (53%)
Query: 529 EAWSAEQIDLGLVESTIEYICRHEGDGAILVFLTGWNDISKLLDQIKVNKFLGDPNKFLV 588
EA E+ L + ++ + + E G IL+F++G +I D + NK + +
Sbjct: 266 EADDTERDQLQAIFDAVDELSQ-ESHGDILIFMSGEREIRDTADAL--NKL--NLRHTEI 320
Query: 589 LPLHGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALN 648
LPL+ + Q +F + R+IVLATN+AE+S+T+ + YV+D G A+ + Y
Sbjct: 321 LPLYARLSNSEQNRVFQSH--SGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRT 378
Query: 649 KLACLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQLPEILRTPLQELCL 708
K+ L IS+ASA+QR+GR GRV G+C +LY + + PEILRT L + L
Sbjct: 379 KVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVIL 438
Query: 709 HIKSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGAL--DDMEN---LTPLGRHLCTL 763
+ +L LG + +F ++ PD +Q+ + LL+ +GA+ D+ + LTPLGR L L
Sbjct: 439 QMTALGLGDIAAF--PFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQL 496
Query: 764 PVDPNIGKMLLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDH 823
PVDP + +M+L C+ A+ I +AL+ ++P P++ Q+ DE R F D SD
Sbjct: 497 PVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFH-DKESDF 555
Query: 824 IALLKAFD--GYKD-AKRNRRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSK 880
+A + ++ G + A + R C ++L+ + ++ +D+ +Q ++ ++G S+
Sbjct: 556 LAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSE 615
Query: 881 GPSAY 885
P+ Y
Sbjct: 616 -PAEY 619
Score = 268 (99.4 bits), Expect = 9.9e-58, Sum P(3) = 9.9e-58
Identities = 63/201 (31%), Positives = 101/201 (50%)
Query: 264 KLKSSDSGKAMLSFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEEL 323
K+ ++ + +++ + LP + K + L+A+ ++QV++V+GETG GKTTQLP+ +E L
Sbjct: 60 KVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICME--L 117
Query: 324 SSLRGADCNIICTQPXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLLFCTT 383
RG I TQP E G +GY++R S T + T
Sbjct: 118 G--RGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTD 175
Query: 384 GVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINAD 443
G+LL ++ +D L +++DE HER +N DF SATI+ +
Sbjct: 176 GILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPE 235
Query: 444 LFSKYFGNAPTVHIPGLTFPV 464
FS++F NAP + + G T+PV
Sbjct: 236 RFSRHFNNAPIIEVSGRTYPV 256
Score = 41 (19.5 bits), Expect = 9.9e-58, Sum P(3) = 9.9e-58
Identities = 7/15 (46%), Positives = 12/15 (80%)
Query: 498 DSKKDHLTALFEDVD 512
D+++D L A+F+ VD
Sbjct: 269 DTERDQLQAIFDAVD 283
>MGI|MGI:1914737 [details] [associations]
symbol:Dhx40 "DEAH (Asp-Glu-Ala-His) box polypeptide 40"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 MGI:MGI:1914737
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 EMBL:AL592222 HOVERGEN:HBG039428
GeneTree:ENSGT00700000104421 CTD:79665 OMA:LYGSMPT EMBL:AK004610
EMBL:AK010512 EMBL:AK031000 EMBL:AK075991 EMBL:AL596111
EMBL:BC058276 IPI:IPI00453964 RefSeq:NP_080467.3 UniGene:Mm.260627
ProteinModelPortal:Q6PE54 SMR:Q6PE54 STRING:Q6PE54
PhosphoSite:Q6PE54 PaxDb:Q6PE54 PRIDE:Q6PE54
Ensembl:ENSMUST00000018569 GeneID:67487 KEGG:mmu:67487
UCSC:uc007ktc.1 InParanoid:Q6PE54 OrthoDB:EOG48PMJH NextBio:324718
Bgee:Q6PE54 CleanEx:MM_DHX40 Genevestigator:Q6PE54
GermOnline:ENSMUSG00000018425 Uniprot:Q6PE54
Length = 779
Score = 406 (148.0 bits), Expect = 1.3e-57, Sum P(2) = 1.3e-57
Identities = 131/432 (30%), Positives = 214/432 (49%)
Query: 540 LVESTIEYICRHEGDGAILVFLTGWNDISK---LLDQ----IKVNKFLGDP--NKFLVLP 590
+V+ T++ I +E G ILVFLTG +I K LL Q + + + D + L+LP
Sbjct: 259 IVKVTMD-IHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILP 317
Query: 591 LHGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKL 650
+GSM T QR IF PPP RK V++TNI+ +S+TID + YVVD G K+ +++ L
Sbjct: 318 CYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGL 377
Query: 651 ACLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLP-YQLPEILRTPLQELCLH 709
L ISK+ A QR GRAGR G C+++Y + +P + +PEI RT L + L
Sbjct: 378 DILEVVPISKSEALQRSGRAGRTASGKCFRIYSKEFWSQCMPDHVIPEIKRTSLTSVVLT 437
Query: 710 IKSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNI 769
+K L + V F L PP+ + A++ L A+D ++T LG + P+ P++
Sbjct: 438 LKCLAIHDVIRF--PYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHL 495
Query: 770 GKMLLMGAIFQCLNPALTIAAALAHRNPFVLPVN--MQKEVDEAKRSFAGDSCS-DHIAL 826
++ A C + L IAA L+ N F+ PV+ QKE ++ R A + + A
Sbjct: 496 TCAVIRAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRELAAKAGGFNDFAT 555
Query: 827 LKAFDGYKDAKRNRRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGP-SAY 885
L ++ K + +C ++++ L + +Q +L+ + +S P +
Sbjct: 556 LAVI--FEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLK--QQSDFPRETF 611
Query: 886 NRYSHDLEMVCAILCAGLYPNVVQCKRKGKRAVFYTKEVGQVALHPSSVNANQNNFPLPY 945
H++ C LCAG + NV + + G+ V +HPSS Q L +
Sbjct: 612 EGPKHEVLRRC--LCAGYFKNVAR-RSVGRTFCTMDGRGSPVHIHPSSALHEQET-KLEW 667
Query: 946 MVYSEMVKTNNI 957
+++ E++ T +
Sbjct: 668 IIFHEVLVTTKV 679
Score = 269 (99.8 bits), Expect = 1.3e-57, Sum P(2) = 1.3e-57
Identities = 72/224 (32%), Positives = 107/224 (47%)
Query: 251 KERLNVI-LKERQEKLKSSDSGKAMLSFREKLPAFKMKAEFLKAVAENQVLVVSGETGCG 309
+ER + + + +R+EK +S G +F P K + + ++AV +N L+V+G TG G
Sbjct: 26 EERPSAVRIADREEKGCTSQEGGTTPTF----PIQKQRKKLIQAVRDNSFLIVTGNTGSG 81
Query: 310 KTTQLPQFILEEELSSLRGADCNIICTQPXXXXXXXXXXXXXXERGENLGETVGYQIRLE 369
KTTQLP+++ E S G I TQP E LG VGYQ+R +
Sbjct: 82 KTTQLPKYLYEAGFSQ-HGM---IGVTQPRKVAAISVAQRVAEEMKCTLGSKVGYQVRFD 137
Query: 370 SKRSAQTRLLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXX 429
S +T + + T G LL+ ++ DP+LS S +++DE HER + D
Sbjct: 138 DCSSKETAIKYMTDGCLLKHILGDPNLSKFSVIILDEAHERTLTTDILFGLLKKLFQDKS 197
Query: 430 -----XXXXXXMSATINADLFSKYFGNAPTVHIPGLTFPVTDLF 468
MSAT+ S +FGN P IPG +PV + F
Sbjct: 198 PNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKF 241
>RGD|1359618 [details] [associations]
symbol:Dhx40 "DEAH (Asp-Glu-Ala-His) box polypeptide 40"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1359618 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
GeneTree:ENSGT00700000104421 CTD:79665 OMA:LYGSMPT
OrthoDB:EOG48PMJH EMBL:BC083821 IPI:IPI00369962
RefSeq:NP_001005873.1 UniGene:Rn.29182 ProteinModelPortal:Q5XI69
PhosphoSite:Q5XI69 Ensembl:ENSRNOT00000006926 GeneID:287595
KEGG:rno:287595 InParanoid:Q5XI69 NextBio:626568
ArrayExpress:Q5XI69 Genevestigator:Q5XI69
GermOnline:ENSRNOG00000004549 Uniprot:Q5XI69
Length = 779
Score = 407 (148.3 bits), Expect = 2.1e-57, Sum P(2) = 2.1e-57
Identities = 131/432 (30%), Positives = 215/432 (49%)
Query: 540 LVESTIEYICRHEGDGAILVFLTGWNDISK---LLDQ----IKVNKFLGDP--NKFLVLP 590
+V+ T++ I +E G ILVFLTG +I K LL Q + + + D + L+LP
Sbjct: 259 IVKVTMD-IHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILP 317
Query: 591 LHGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKL 650
+GSM T QR IF PPP RK V++TNI+ +S+TID + YVVD G K+ +++ L
Sbjct: 318 CYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGL 377
Query: 651 ACLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLP-YQLPEILRTPLQELCLH 709
L ISK+ A QR GRAGR G C+++Y + + +P + +PEI RT L + L
Sbjct: 378 DILEVVPISKSEALQRSGRAGRTASGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLT 437
Query: 710 IKSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNI 769
+K L + V F L PP+ + A++ L A+D ++T LG + P+ P++
Sbjct: 438 LKCLAIHDVIRF--PYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHL 495
Query: 770 GKMLLMGAIFQCLNPALTIAAALAHRNPFVLPVN--MQKEVDEAKRSFAGDSCS-DHIAL 826
++ A C + L IAA L+ N F+ PV+ QKE ++ R A + + A
Sbjct: 496 TCAVIRAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQKHRELAAKAGGFNDFAT 555
Query: 827 LKAFDGYKDAKRNRRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGP-SAY 885
L ++ K + +C ++++ L + +Q +L+ + +S P +
Sbjct: 556 LAVI--FEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLK--QQSDFPRETF 611
Query: 886 NRYSHDLEMVCAILCAGLYPNVVQCKRKGKRAVFYTKEVGQVALHPSSVNANQNNFPLPY 945
H++ C LCAG + NV + + G+ V +HPSS Q L +
Sbjct: 612 EGPKHEVLRRC--LCAGYFKNVAR-RSVGRTFCTMDGRGSPVHIHPSSALHEQET-KLEW 667
Query: 946 MVYSEMVKTNNI 957
+++ E++ T +
Sbjct: 668 IIFHEVLVTTKV 679
Score = 266 (98.7 bits), Expect = 2.1e-57, Sum P(2) = 2.1e-57
Identities = 71/224 (31%), Positives = 107/224 (47%)
Query: 251 KERLNVI-LKERQEKLKSSDSGKAMLSFREKLPAFKMKAEFLKAVAENQVLVVSGETGCG 309
+ER + + + +R+EK +S G +F P K + + ++AV +N L+V+G TG G
Sbjct: 26 EERPSAVRIADREEKGCTSQEGGTTPTF----PIQKQRKKLIQAVRDNSFLIVTGNTGSG 81
Query: 310 KTTQLPQFILEEELSSLRGADCNIICTQPXXXXXXXXXXXXXXERGENLGETVGYQIRLE 369
KTTQLP+++ E S G I TQP E LG VGYQ+R +
Sbjct: 82 KTTQLPKYLYEAGFSQ-HGM---IGVTQPRKVAAISVAQRVAEEMKCTLGSKVGYQVRFD 137
Query: 370 SKRSAQTRLLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXX 429
S +T + + T G LL+ ++ DP+L+ S +++DE HER + D
Sbjct: 138 DCSSKETAIKYMTDGCLLKHILGDPNLNKFSVIILDEAHERTLTTDILFGLLKKLFQDKS 197
Query: 430 -----XXXXXXMSATINADLFSKYFGNAPTVHIPGLTFPVTDLF 468
MSAT+ S +FGN P IPG +PV + F
Sbjct: 198 PNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKF 241
>UNIPROTKB|J9NVQ3 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 OMA:LYGSMPT EMBL:AAEX03006584
EMBL:AAEX03006585 Ensembl:ENSCAFT00000048714 Uniprot:J9NVQ3
Length = 857
Score = 408 (148.7 bits), Expect = 2.3e-57, Sum P(2) = 2.3e-57
Identities = 131/432 (30%), Positives = 215/432 (49%)
Query: 540 LVESTIEYICRHEGDGAILVFLTGWNDISK---LLDQ----IKVNKFLGDP--NKFLVLP 590
+V+ T++ I +E G ILVFLTG +I K LL Q + + + D + L+LP
Sbjct: 337 IVKVTMD-IHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILP 395
Query: 591 LHGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKL 650
+GSM T QR IF PPP RK V++TNI+ +S+TID + YVVD G K+ +++ L
Sbjct: 396 CYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGL 455
Query: 651 ACLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLP-YQLPEILRTPLQELCLH 709
L ISK+ A QR GRAGR G C+++Y + + +P + +PEI RT L + L
Sbjct: 456 DILEVVPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLT 515
Query: 710 IKSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNI 769
+K L + V F L PP+ + A++ L A+D ++T LG + P+ P++
Sbjct: 516 LKCLAIHDVIRF--PYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHL 573
Query: 770 GKMLLMGAIFQCLNPALTIAAALAHRNPFVLPVN--MQKEVDEAKRSFAGDSCS-DHIAL 826
++ A C + L IAA L+ N F+ PV+ QKE ++ R A + + A
Sbjct: 574 TCAVIKAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRELAAKAGGFNDFAT 633
Query: 827 LKAFDGYKDAKRNRRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGP-SAY 885
L ++ K + +C ++++ L + +Q +L+ + +S P +
Sbjct: 634 LAVI--FEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLK--QQSDFPRETF 689
Query: 886 NRYSHDLEMVCAILCAGLYPNVVQCKRKGKRAVFYTKEVGQVALHPSSVNANQNNFPLPY 945
H++ C LCAG + NV + + G+ V +HPSS Q L +
Sbjct: 690 EGPKHEVLRRC--LCAGYFKNVAR-RSVGRTFCTMDGRGSPVHIHPSSALHEQET-KLEW 745
Query: 946 MVYSEMVKTNNI 957
+++ E++ T +
Sbjct: 746 IIFHEVLVTTKV 757
Score = 267 (99.0 bits), Expect = 2.3e-57, Sum P(2) = 2.3e-57
Identities = 72/227 (31%), Positives = 108/227 (47%)
Query: 248 DSAKERLNVI-LKERQEKLKSSDSGKAMLSFREKLPAFKMKAEFLKAVAENQVLVVSGET 306
D +ER + + + +R+EK +S G +F P K + + ++AV +N L+V+G T
Sbjct: 101 DLQEERPSAVSIADREEKGCTSQEGGTTPTF----PIQKQRKKLIQAVRDNSFLIVTGNT 156
Query: 307 GCGKTTQLPQFILEEELSSLRGADCNIICTQPXXXXXXXXXXXXXXERGENLGETVGYQI 366
G GKTTQLP+++ E S G I TQP E LG VGYQ+
Sbjct: 157 GSGKTTQLPKYLYEAGFSQ-HGM---IGVTQPRKVAAISVAQRVAEEMKCALGSKVGYQV 212
Query: 367 RLESKRSAQTRLLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFXXXXXXXXXX 426
R + S +T + + T G LL+ ++ DP+L+ S +++DE HER + D
Sbjct: 213 RFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQ 272
Query: 427 XXX-----XXXXXXMSATINADLFSKYFGNAPTVHIPGLTFPVTDLF 468
MSAT+ S +FGN P IPG +PV + F
Sbjct: 273 EKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKF 319
>UNIPROTKB|F1NWM3 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 OMA:LYGSMPT EMBL:AADN02025787
IPI:IPI00583149 Ensembl:ENSGALT00000008234 Uniprot:F1NWM3
Length = 730
Score = 390 (142.3 bits), Expect = 2.4e-57, Sum P(2) = 2.4e-57
Identities = 135/438 (30%), Positives = 212/438 (48%)
Query: 541 VESTIEYICRHEGDGAILVFLTGWNDISKLLDQI--KVNKF-----LGDPN--KFLVLPL 591
V+ T++ I +E +G ILVFLTG +I K D + K + D + L+LPL
Sbjct: 209 VKVTLD-IHLNEPEGDILVFLTGQIEIEKACDLLFKKAESIDYRYEVHDRSIEGLLILPL 267
Query: 592 HGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLA 651
+GSM T Q+ IF P RK V++TNIA +S+TI+ V YVVD G K+ +++ L
Sbjct: 268 YGSMSTDQQKRIFLPAPKGIRKCVVSTNIAATSLTIEGVRYVVDSGFVKQLNHNPRVGLD 327
Query: 652 CLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLP-YQLPEILRTPLQELCLHI 710
L ISK+ A QR GRAGR G Y+LY + +P + +PEI RT L + L +
Sbjct: 328 ILEVVPISKSEAMQRAGRAGRTSSGKSYRLYSTEFWEQCMPDHTVPEIKRTSLTSVILTL 387
Query: 711 KSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDME--NLTPLGRHLCTLPVDPN 768
K L + V F L P+ + A++ L A+D ++T LG L P+ PN
Sbjct: 388 KCLSVHDVIRF--PYLDRPEERHILEALKQLYQCDAIDRTRRGHVTRLGEFLVQFPLPPN 445
Query: 769 IGKMLLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQK----EVDEAKRSFAGDSCSDHI 824
+ ++ A C + L IAA L+ N F+ P + QK E+ + S C+D
Sbjct: 446 LSCAVIKAASLDCEDMLLPIAAMLSVENVFIRPGDPQKQKEAELQHQELSSQVGGCNDFA 505
Query: 825 ALLKAFDGYKDAKRNRRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFV-DKSKGPS 883
LL F+ K ++ +C + ++ ++ + Q ++ S + + D K
Sbjct: 506 TLLNIFE---QCKASKSPSAWCHKYWIHWRAVKSALSVEKQLREITSKLKQLPDFPKETF 562
Query: 884 AYNRYSHDLEMVCAILCAGLYPNVVQCKRKGKRAVFYTKEV-GQVA-LHPSSVNANQNNF 941
+R E++ LCAG + NV R+ F T + G + +HPSS NQ
Sbjct: 563 EGSR----TELLRRCLCAGYFINVA---RRSAARTFCTMDGHGSIVYIHPSSTLYNQET- 614
Query: 942 PLPYMVYSEMVKTNNINV 959
L ++++ ++ T+ I V
Sbjct: 615 RLEWIIFHDVTVTSKIYV 632
Score = 282 (104.3 bits), Expect = 2.4e-57, Sum P(2) = 2.4e-57
Identities = 67/194 (34%), Positives = 100/194 (51%)
Query: 281 LPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQPXX 340
LP + + ++AV+E L+V+GETG GK+TQLP+++ E L+ GA I TQP
Sbjct: 1 LPIRRHRRALVRAVSERPFLIVTGETGSGKSTQLPKYLYEAGLAQ-HGA---IGVTQPRR 56
Query: 341 XXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVEDPDLSCVS 400
E G LG VGYQ+R + S +T + + T G LLR ++ DP LS S
Sbjct: 57 VATISVAQRVAEEMGCALGSVVGYQVRFDDCSSEETAIKYMTDGCLLRHILADPLLSKYS 116
Query: 401 HLLVDEIHERGMNEDFXXXXXXXXXXXX------XXXXXXXMSATINADLFSKYFGNAPT 454
+++DE HER ++ D MSAT+ D S++FG+
Sbjct: 117 IIILDEAHERSLSTDILFGLLKKLFLQNKPPGRKTEMKVVVMSATLEVDKLSEFFGHCSV 176
Query: 455 VHIPGLTFPVTDLF 468
+HIPG ++PV ++F
Sbjct: 177 LHIPGRSYPVKEIF 190
Score = 37 (18.1 bits), Expect = 1.3e-19, Sum P(2) = 1.3e-19
Identities = 8/24 (33%), Positives = 15/24 (62%)
Query: 992 YLHFSASKTVLELIRKLRGELDKL 1015
++H+ A K+ L + ++LR KL
Sbjct: 528 WIHWRAVKSALSVEKQLREITSKL 551
>UNIPROTKB|Q9KS77 [details] [associations]
symbol:VC1382 "ATP-dependent helicase HrpA" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0004386
"helicase activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GenomeReviews:AE003852_GR GO:GO:0003676 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K03578 OMA:TYQFEPG
ProtClustDB:PRK11131 InterPro:IPR024590 Pfam:PF11898
TIGRFAMs:TIGR01967 EMBL:AE004217 PIR:F82207 RefSeq:NP_231026.2
ProteinModelPortal:Q9KS77 DNASU:2614836 GeneID:2614836
KEGG:vch:VC1382 PATRIC:20081832 Uniprot:Q9KS77
Length = 1309
Score = 412 (150.1 bits), Expect = 3.2e-57, Sum P(2) = 3.2e-57
Identities = 110/361 (30%), Positives = 197/361 (54%)
Query: 534 EQIDLGLVESTIEYICRHEGDGAILVFLTGWNDISKLLDQIKVNKFLGDPNKFLVLPLHG 593
+Q++ G+ ++ ++ +C EG G IL+F+ G +I D + + L D ++PL+
Sbjct: 284 DQLE-GIFQA-VDELC-DEGLGDILIFMNGEREIRDTADALS-KRNLRDTE---IVPLYA 336
Query: 594 SMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACL 653
+ Q +IF P R+IVLATN+AE+S+T+ + YV+D G A+ + Y K+ L
Sbjct: 337 RLSAGEQNKIFQ--PHAGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRL 394
Query: 654 LPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQLPEILRTPLQELCLHIKSL 713
IS+ASA+QR+GR GR + G+C +LY + + PEILRT L + L + +L
Sbjct: 395 PIEPISQASANQRKGRCGRTEEGICIRLYSEEDFLSRPEFTDPEILRTNLASVILQMTAL 454
Query: 714 QLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDM-----ENLTPLGRHLCTLPVDPN 768
LG + +F ++ PD +Q+ + LL+ +GA++D + LT G+ L LP+DP
Sbjct: 455 GLGDIEAF--PFVEAPDKRNIQDGVRLLEELGAINDQIKDPKKRLTESGKQLARLPIDPR 512
Query: 769 IGKMLLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLK 828
+ +M+L + CL + IA+AL+ ++P P + Q+ D+ R F + SD + L+
Sbjct: 513 LARMVLEASKLGCLKEVMIIASALSIQDPRERPSDKQQSADDKHRRFNHED-SDFLTLVN 571
Query: 829 AFD--GYKD-AKRNRRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAY 885
+ G + A + + R C ++L+ + ++ +D+ +Q ++GF + P +Y
Sbjct: 572 LWHYIGQQQKALTSNQFRRQCKLDYLNYLRVREWQDVYTQLHQSTREMGFKLNDE-PGSY 630
Query: 886 N 886
+
Sbjct: 631 H 631
Score = 269 (99.8 bits), Expect = 3.2e-57, Sum P(2) = 3.2e-57
Identities = 65/184 (35%), Positives = 94/184 (51%)
Query: 281 LPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQPXX 340
LP + + + +A+A +QV++V+GETG GKTTQLP+ E L RG I TQP
Sbjct: 87 LPVSQKRDDIAQAIAHHQVVIVAGETGSGKTTQLPKICAE--LG--RGKYGLIGHTQPRR 142
Query: 341 XXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVEDPDLSCVS 400
E LG VGY++R + S QT++ T G+LL ++ D L+
Sbjct: 143 LAARSVANRIAEEMETELGGFVGYKVRFTDQISDQTQIKLMTDGILLAEIQNDRFLNQYD 202
Query: 401 HLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGNAPTVHIPGL 460
+++DE HER +N DF SATI+ + FSK+F NAP + + G
Sbjct: 203 TIIIDEAHERSLNIDFILGYLKQLLPRRPDLKVIITSATIDPERFSKHFSNAPIIEVSGR 262
Query: 461 TFPV 464
T+PV
Sbjct: 263 TYPV 266
Score = 40 (19.1 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 8/28 (28%), Positives = 16/28 (57%)
Query: 748 DDMENLTPLGRHLCTLPVDPNIGKMLLM 775
D + + + R + LPVDPN ++ ++
Sbjct: 1219 DILRYMRAIERRMEKLPVDPNKDRLHML 1246
Score = 38 (18.4 bits), Expect = 1.8e-17, Sum P(2) = 1.8e-17
Identities = 7/25 (28%), Positives = 15/25 (60%)
Query: 1016 LNRKIEDPRVDLSVEGKAVVSAVVE 1040
+N +I+DP+ L+ GK + ++
Sbjct: 486 INDQIKDPKKRLTESGKQLARLPID 510
>TIGR_CMR|VC_1382 [details] [associations]
symbol:VC_1382 "ATP-dependent helicase HrpA" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0004386 "helicase activity"
evidence=ISS] [GO:0008152 "metabolic process" evidence=ISS]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR010222 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GenomeReviews:AE003852_GR GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K03578 OMA:TYQFEPG
ProtClustDB:PRK11131 InterPro:IPR024590 Pfam:PF11898
TIGRFAMs:TIGR01967 EMBL:AE004217 PIR:F82207 RefSeq:NP_231026.2
ProteinModelPortal:Q9KS77 DNASU:2614836 GeneID:2614836
KEGG:vch:VC1382 PATRIC:20081832 Uniprot:Q9KS77
Length = 1309
Score = 412 (150.1 bits), Expect = 3.2e-57, Sum P(2) = 3.2e-57
Identities = 110/361 (30%), Positives = 197/361 (54%)
Query: 534 EQIDLGLVESTIEYICRHEGDGAILVFLTGWNDISKLLDQIKVNKFLGDPNKFLVLPLHG 593
+Q++ G+ ++ ++ +C EG G IL+F+ G +I D + + L D ++PL+
Sbjct: 284 DQLE-GIFQA-VDELC-DEGLGDILIFMNGEREIRDTADALS-KRNLRDTE---IVPLYA 336
Query: 594 SMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACL 653
+ Q +IF P R+IVLATN+AE+S+T+ + YV+D G A+ + Y K+ L
Sbjct: 337 RLSAGEQNKIFQ--PHAGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRL 394
Query: 654 LPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQLPEILRTPLQELCLHIKSL 713
IS+ASA+QR+GR GR + G+C +LY + + PEILRT L + L + +L
Sbjct: 395 PIEPISQASANQRKGRCGRTEEGICIRLYSEEDFLSRPEFTDPEILRTNLASVILQMTAL 454
Query: 714 QLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDM-----ENLTPLGRHLCTLPVDPN 768
LG + +F ++ PD +Q+ + LL+ +GA++D + LT G+ L LP+DP
Sbjct: 455 GLGDIEAF--PFVEAPDKRNIQDGVRLLEELGAINDQIKDPKKRLTESGKQLARLPIDPR 512
Query: 769 IGKMLLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLK 828
+ +M+L + CL + IA+AL+ ++P P + Q+ D+ R F + SD + L+
Sbjct: 513 LARMVLEASKLGCLKEVMIIASALSIQDPRERPSDKQQSADDKHRRFNHED-SDFLTLVN 571
Query: 829 AFD--GYKD-AKRNRRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAY 885
+ G + A + + R C ++L+ + ++ +D+ +Q ++GF + P +Y
Sbjct: 572 LWHYIGQQQKALTSNQFRRQCKLDYLNYLRVREWQDVYTQLHQSTREMGFKLNDE-PGSY 630
Query: 886 N 886
+
Sbjct: 631 H 631
Score = 269 (99.8 bits), Expect = 3.2e-57, Sum P(2) = 3.2e-57
Identities = 65/184 (35%), Positives = 94/184 (51%)
Query: 281 LPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQPXX 340
LP + + + +A+A +QV++V+GETG GKTTQLP+ E L RG I TQP
Sbjct: 87 LPVSQKRDDIAQAIAHHQVVIVAGETGSGKTTQLPKICAE--LG--RGKYGLIGHTQPRR 142
Query: 341 XXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVEDPDLSCVS 400
E LG VGY++R + S QT++ T G+LL ++ D L+
Sbjct: 143 LAARSVANRIAEEMETELGGFVGYKVRFTDQISDQTQIKLMTDGILLAEIQNDRFLNQYD 202
Query: 401 HLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGNAPTVHIPGL 460
+++DE HER +N DF SATI+ + FSK+F NAP + + G
Sbjct: 203 TIIIDEAHERSLNIDFILGYLKQLLPRRPDLKVIITSATIDPERFSKHFSNAPIIEVSGR 262
Query: 461 TFPV 464
T+PV
Sbjct: 263 TYPV 266
Score = 40 (19.1 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 8/28 (28%), Positives = 16/28 (57%)
Query: 748 DDMENLTPLGRHLCTLPVDPNIGKMLLM 775
D + + + R + LPVDPN ++ ++
Sbjct: 1219 DILRYMRAIERRMEKLPVDPNKDRLHML 1246
Score = 38 (18.4 bits), Expect = 1.8e-17, Sum P(2) = 1.8e-17
Identities = 7/25 (28%), Positives = 15/25 (60%)
Query: 1016 LNRKIEDPRVDLSVEGKAVVSAVVE 1040
+N +I+DP+ L+ GK + ++
Sbjct: 486 INDQIKDPKKRLTESGKQLARLPID 510
>UNIPROTKB|Q08DS9 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
HOVERGEN:HBG039428 GeneTree:ENSGT00700000104421 CTD:79665
OMA:LYGSMPT EMBL:DAAA02048338 EMBL:BC123581 IPI:IPI00715479
RefSeq:NP_001070365.1 UniGene:Bt.63706 Ensembl:ENSBTAT00000023753
GeneID:533484 KEGG:bta:533484 InParanoid:Q08DS9 NextBio:20876051
Uniprot:Q08DS9
Length = 779
Score = 408 (148.7 bits), Expect = 3.4e-57, Sum P(2) = 3.4e-57
Identities = 131/432 (30%), Positives = 215/432 (49%)
Query: 540 LVESTIEYICRHEGDGAILVFLTGWNDISK---LLDQ----IKVNKFLGDP--NKFLVLP 590
+V+ T++ I +E G ILVFLTG +I K LL Q + + + D + L+LP
Sbjct: 259 IVKVTMD-IHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILP 317
Query: 591 LHGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKL 650
+GSM T QR IF PPP RK V++TNI+ +S+TID + YVVD G K+ +++ L
Sbjct: 318 CYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGL 377
Query: 651 ACLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLP-YQLPEILRTPLQELCLH 709
L ISK+ A QR GRAGR G C+++Y + + +P + +PEI RT L + L
Sbjct: 378 DILEVVPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLT 437
Query: 710 IKSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNI 769
+K L + V F L PP+ + A++ L A+D ++T LG + P+ P++
Sbjct: 438 LKCLAIHDVIRF--PYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHL 495
Query: 770 GKMLLMGAIFQCLNPALTIAAALAHRNPFVLPVN--MQKEVDEAKRSFAGDSCS-DHIAL 826
++ A C + L IAA L+ N F+ PV+ QKE ++ R A + + A
Sbjct: 496 TCAVIKAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRELAAKAGGFNDFAT 555
Query: 827 LKAFDGYKDAKRNRRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGP-SAY 885
L ++ K + +C ++++ L + +Q +L+ + +S P +
Sbjct: 556 LAVI--FEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLK--QQSDFPRETF 611
Query: 886 NRYSHDLEMVCAILCAGLYPNVVQCKRKGKRAVFYTKEVGQVALHPSSVNANQNNFPLPY 945
H++ C LCAG + NV + + G+ V +HPSS Q L +
Sbjct: 612 EGPKHEVLRRC--LCAGYFKNVAR-RSVGRTFCTMDGRGSPVHIHPSSALHEQET-KLEW 667
Query: 946 MVYSEMVKTNNI 957
+++ E++ T +
Sbjct: 668 IIFHEVLVTTKV 679
Score = 263 (97.6 bits), Expect = 3.4e-57, Sum P(2) = 3.4e-57
Identities = 72/227 (31%), Positives = 107/227 (47%)
Query: 248 DSAKERLNV-ILKERQEKLKSSDSGKAMLSFREKLPAFKMKAEFLKAVAENQVLVVSGET 306
D +ER + + +R+EK +S G +F P K + + ++AV +N L+V+G T
Sbjct: 23 DLQEERPSAGSVADREEKGCTSQEGGTTPTF----PIQKQRKKLIQAVRDNSFLIVTGNT 78
Query: 307 GCGKTTQLPQFILEEELSSLRGADCNIICTQPXXXXXXXXXXXXXXERGENLGETVGYQI 366
G GKTTQLP+++ E S G I TQP E LG VGYQ+
Sbjct: 79 GSGKTTQLPKYLYEAGFSQ-HGM---IGVTQPRKVAAISVAQRVAEEMKCTLGSKVGYQV 134
Query: 367 RLESKRSAQTRLLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFXXXXXXXXXX 426
R + S +T + + T G LL+ ++ DP+L+ S +++DE HER + D
Sbjct: 135 RFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQ 194
Query: 427 XXX-----XXXXXXMSATINADLFSKYFGNAPTVHIPGLTFPVTDLF 468
MSAT+ S +FGN P IPG +PV + F
Sbjct: 195 EKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKF 241
>ASPGD|ASPL0000001852 [details] [associations]
symbol:AN6085 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005730
"nucleolus" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:BN001301 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:PGQEEID EnsemblFungi:CADANIAT00006930
Uniprot:C8V2M2
Length = 824
Score = 442 (160.7 bits), Expect = 4.0e-57, Sum P(3) = 4.0e-57
Identities = 136/413 (32%), Positives = 205/413 (49%)
Query: 555 GAILVFLTGWNDISKLLDQIKVNKFL-G-DPN--KFLVLPLHGSMPTINQREIFDRPPPN 610
G ILVFLTG + + L+ + VN++ G DP+ K VLPL ++P Q+ +F PP
Sbjct: 403 GDILVFLTGQETV-EALENL-VNEYATGMDPSLPKIQVLPLFAALPQAAQQRVFVPAPPR 460
Query: 611 KRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRA 670
RKI+LATNIAE+S+T+ V YVVDCGKAK + L LL ISK++A QR+GRA
Sbjct: 461 TRKIILATNIAETSVTVSGVRYVVDCGKAKIKQFRTRLGLDSLLVKPISKSAAIQRKGRA 520
Query: 671 GRVQPGVCYKLYPRIIHDAMLPYQLPEILRTPLQELCLHIKSLQLGTVGSFLSKALQPPD 730
GR PG CY+LY + A+ PEILR L + L++K+ + V F +PP
Sbjct: 521 GREAPGQCYRLYTEKDYLALDEVNTPEILRCDLSQAILNMKARGVDNVIEF-PFLTRPPR 579
Query: 731 PLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGKMLLMGAIF--QCLNPALTI 788
A++ A+ L +I ALD+ ++ G H+ LP+ P +G++LL + F CL + I
Sbjct: 580 E-ALEKALLQLLSIEALDETGKISETGSHIAKLPLTPTLGRVLLAASDFGPDCLTDVIDI 638
Query: 789 AAALAHRNPFVLPVNMQK-EVDEAKRSFAGDSCSDHIALLKAFDGYKDAKRNRRERDFCW 847
+ L+ N F+ + +K E EA R DH+ +L Y A N + +
Sbjct: 639 ISCLSVENIFLNTTSEEKKEAAEAARRDLYRREGDHLTMLATVRAY--ASENTDRKAWAE 696
Query: 848 ENFLSPITLQMMEDMRSQFLDLLSDIGFVD---KSKGPSAYNRYSHDLEMVCAILCAGLY 904
+ +S +Q + D+R Q + +S+ + + + G
Sbjct: 697 RHLVSHRAMQSVMDVRKQLTAQCRQAKLLPSPTESRDSDSSSIREPSPVFILKSFLRGFA 756
Query: 905 PNVVQCKRKGKRAVFYTKEVGQ--VALHPSSVNANQNNFPLPYMVYSEMVKTN 955
N + G Y VG VA+HPSSV + + ++Y+E V TN
Sbjct: 757 TNTARLVPDGS----YRTVVGNQTVAIHPSSVLFGKK---VEAILYNEFVFTN 802
Score = 146 (56.5 bits), Expect = 4.0e-57, Sum P(3) = 4.0e-57
Identities = 33/88 (37%), Positives = 48/88 (54%)
Query: 333 IICTQPXXXXXXXXXXXXXXERGENLGET-----VGYQIRLESKRSAQTRLLFCTTGVLL 387
I TQP E G LG + VGY +R ++ S TR+ F T G+LL
Sbjct: 213 IAITQPRRVAAISLARRVAEEMGTPLGSSSPASKVGYSVRFDTSVSPSTRVKFLTEGMLL 272
Query: 388 RQLVEDPDLSCVSHLLVDEIHERGMNED 415
++++ DP L+ S ++VDE+HERG+N D
Sbjct: 273 QEMLHDPWLTKYSAIVVDEVHERGVNVD 300
Score = 125 (49.1 bits), Expect = 4.0e-57, Sum P(3) = 4.0e-57
Identities = 44/168 (26%), Positives = 80/168 (47%)
Query: 166 KGKALAVSKVPLPMY--RPDLDERHGSTE----KELQMSIETE---RRVGNLLNSSQGNV 216
+GK L +K P P RP ++ + S + K Q++ ET + N S V
Sbjct: 20 QGKPLKSNKKPSPETGERPSDNKENVSKKNKKRKRDQLADETRLHRTKKSNTSESQAAAV 79
Query: 217 PVNDSGIESSEVARRPKLSVKVANTISPPQSDSAKERLNVI-LKERQEKLKSSDSGKAML 275
N++ E V + ++ + P++ K + + K+ + +S KA +
Sbjct: 80 EQNENRKEDEAVNNSGEATIAKSLPKDQPENQKHKRKKHSRPFKDEENGRTASLKKKAQM 139
Query: 276 SF--REKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEE 321
+ R+ LP F E + + +N V+++ GETG GK+TQ+PQF+++E
Sbjct: 140 LYEIRKNLPIFAHGDEIRQHLRKNDVMLLIGETGSGKSTQIPQFLVDE 187
>DICTYBASE|DDB_G0269306 [details] [associations]
symbol:dhx35 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0269306 GO:GO:0005524
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K13117 OMA:NIFVVPP
RefSeq:XP_645858.1 ProteinModelPortal:Q55EC3
EnsemblProtists:DDB0233419 GeneID:8616802 KEGG:ddi:DDB_G0269306
InParanoid:Q55EC3 Uniprot:Q55EC3
Length = 716
Score = 432 (157.1 bits), Expect = 5.3e-57, Sum P(2) = 5.3e-57
Identities = 133/430 (30%), Positives = 216/430 (50%)
Query: 555 GAILVFLTGWNDISKLL----DQIKVNKFLGDPN---------KFLVLPLHGSMPTINQR 601
G ILVFLTG +I KL+ D+ ++ + + K+ +LP++ + Q
Sbjct: 287 GDILVFLTGQEEIEKLIQTLDDKFEILRQYHQQHHHQQQQPFMKYSLLPMYSGLSINKQI 346
Query: 602 EIFDRPPPNK--RKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWIS 659
++F+ +K RKI+++TNIAE+SITID VVYVVDCG K SYD+ + L L+ S
Sbjct: 347 KVFESVGDSKKIRKIIISTNIAETSITIDGVVYVVDCGFVKIKSYDSESGLESLVIVPTS 406
Query: 660 KASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQ-LPEILRTPLQELCLHIKSLQLGTV 718
K+SA+QR GRAGR + G CY+LY + ++ +LP Q +PEI R+ L L +K+L + +
Sbjct: 407 KSSANQRAGRAGRSRAGKCYRLYTELTYEKLLPDQTIPEIQRSNLTNTILQLKALGIDNI 466
Query: 719 GSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLT-PLGRHLCTLPVDPNIGKMLLMGA 777
+F QPP ++ +E+L +GALDD LT P G + P DP KM++ +
Sbjct: 467 LNF-DFISQPPSSSLIRG-LEVLYGLGALDDNGKLTNPTGMIMAEFPTDPTFSKMIIQSS 524
Query: 778 I--FQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKD 835
F C + +TI A L + F N + K + DH+ LL F+ +
Sbjct: 525 SNGFNCSDECITITAMLNIQGLFT---NQNHK--SRKHLLVKEG--DHLTLLNIFNSFIS 577
Query: 836 AKRNRRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYSHDLEMV 895
N+ +C ++ ++ +Q + +R Q L S S NR ++
Sbjct: 578 ---NQSSPQWCNQHQINYKAMQRVLQVRKQLLAYAKKYSINVISCFDSNNNREQCS-NLI 633
Query: 896 CAILCAGLYPNVVQCKRKGKRAVFYTKEVGQVALHPSSVNANQNNFPLPYMVYSEMVKTN 955
+ +G + N Q + G +E ++ LHP+SV N+ P +++++E+ T
Sbjct: 634 RKAIVSGFFTNAAQLQPDGSYQTI--REKHKLWLHPTSVLCLSNS-P-QWVIFNEVTITT 689
Query: 956 NINVYDSTNI 965
+ D T+I
Sbjct: 690 KEYMKDVTSI 699
Score = 232 (86.7 bits), Expect = 5.3e-57, Sum P(2) = 5.3e-57
Identities = 51/140 (36%), Positives = 79/140 (56%)
Query: 278 REKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQ 337
R LP ++ + L + + LV+ G TGCGK+TQ+PQ++ E S G I+CTQ
Sbjct: 52 RISLPIYQNRKHILYLLEKYSTLVIIGNTGCGKSTQIPQYLFESGWSD--GFR-TILCTQ 108
Query: 338 PXXXXXXXXXXXXXXERGE-NLGETVGYQIRLESKRS-AQTRLLFCTTGVLLRQLVEDPD 395
P E GE ++G+TVGY +R + K S +TR+ + T G+L+R+++ DP
Sbjct: 109 PRRVAAISLAERVAQEMGEQHVGKTVGYSVRFDEKISDIETRIKYVTDGMLIREMMLDPL 168
Query: 396 LSCVSHLLVDEIHERGMNED 415
L S +++DE HER + D
Sbjct: 169 LLKYSVIMIDEAHERSLQTD 188
>TIGR_CMR|CPS_2243 [details] [associations]
symbol:CPS_2243 "ATP-dependent helicase HrpA"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004386
"helicase activity" evidence=ISS] [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR010222 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578 OMA:TYQFEPG
InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:YP_268968.1 ProteinModelPortal:Q482P9 STRING:Q482P9
GeneID:3518699 KEGG:cps:CPS_2243 PATRIC:21467591
BioCyc:CPSY167879:GI48-2313-MONOMER Uniprot:Q482P9
Length = 1375
Score = 410 (149.4 bits), Expect = 7.1e-57, Sum P(3) = 7.1e-57
Identities = 118/356 (33%), Positives = 183/356 (51%)
Query: 532 SAEQIDL--GLVESTIEYI-CRHEGDGAILVFLTGWNDISKLLDQ-IKVNKFLGDPNKFL 587
S +++D+ G++ + E C G+G ILVFL G +I +K N L N
Sbjct: 302 SPQEVDIISGILSAVDELSDC---GNGDILVFLNGEREIRDTAAALVKAN--LRHTN--- 353
Query: 588 VLPLHGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDAL 647
VLPL+ + Q +IF P + R IVLATN+AE+S+T+ + YV+D G A+ + Y
Sbjct: 354 VLPLYARLTVSEQNQIFK--PHSGRNIVLATNVAETSLTVPGIKYVIDPGTARISRYSYR 411
Query: 648 NKLACLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQLPEILRTPLQELC 707
K+ L +S+ASA+QR GR GRV G+C +LY + + + PEILRT L +
Sbjct: 412 TKVQRLPIEPVSQASANQRSGRCGRVSEGICIRLYSEDDYKSRAEFTDPEILRTNLATVI 471
Query: 708 LHIKSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMEN--------------- 752
L + +L LG + +F ++ PD + + + LL+ I A++ +EN
Sbjct: 472 LQMHALDLGDIANF--PFVEAPDNRNITDGVRLLEEIAAVESIENADKNAKGKASSTATQ 529
Query: 753 LTPLGRHLCTLPVDPNIGKMLLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAK 812
LT GR L P+DP + KM++ F C+ L I +AL+ ++P P Q+ DE
Sbjct: 530 LTKSGRLLAKFPIDPRLAKMVVSSIEFGCIEQILIIVSALSIQDPRERPHEKQQLSDEKH 589
Query: 813 RSFAGDSCSDHIALLKAFDGYKDAKRNRRERDF---CWENFLSPITLQMMEDMRSQ 865
F D SD I+LL + + K++ + F C FLS + L+ +D+ SQ
Sbjct: 590 NRFK-DKSSDFISLLNLWQYINEQKKDLTQNQFRKLCQREFLSYVRLREWQDIFSQ 644
Score = 276 (102.2 bits), Expect = 7.1e-57, Sum P(3) = 7.1e-57
Identities = 70/212 (33%), Positives = 107/212 (50%)
Query: 258 LKERQEKLKSSDSGKAMLSFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQF 317
++++Q+K++S +++ E LP + A+ A+ NQV++++GETG GKTTQ+P+
Sbjct: 80 IQDKQQKIRSLPK----ITYPEGLPISENAAQISAAIDANQVVIIAGETGSGKTTQIPKI 135
Query: 318 ILEEELSSLRGADCNIICTQPXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTR 377
LE L RG D I TQP E G LGE VGY++R + S Q+
Sbjct: 136 CLE--LG--RGVDGLIGHTQPRRIAARTVANRIAEELGTKLGEQVGYKVRFNDQVSEQSY 191
Query: 378 LLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMS 437
+ T G+LL ++ D L +++DE HER +N DF S
Sbjct: 192 IKLMTDGILLAEMQRDRLLLKYDTIIIDEAHERSLNIDFILGYLKQILIKRPDLKLIITS 251
Query: 438 ATINADLFSKYFGN-----APTVHIPGLTFPV 464
ATI+ F+K+F + AP + + G TFPV
Sbjct: 252 ATIDPQRFAKHFSSKNGLPAPIIEVSGRTFPV 283
Score = 53 (23.7 bits), Expect = 9.8e-20, Sum P(2) = 9.8e-20
Identities = 38/150 (25%), Positives = 58/150 (38%)
Query: 631 VYVVDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQP--GVCYKLYPRIIHD 688
+Y G E D + ACL S + + S HQ G R + C I D
Sbjct: 1167 LYFNPFGSINELLQDCIQG-ACL--SLVQQFSQHQNNGLLPREEKQFAKCCDYVRAEIAD 1223
Query: 689 AMLPYQLP-EILRTPLQELCLHIK-SLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGA 746
+L + E T E+ +K S+ L + S Q + L + + +
Sbjct: 1224 CVLTAAIKVERALTLRHEVTKKMKGSVPLNVIQSH-GDIKQQCEQLVFKGFVTY-SGLSK 1281
Query: 747 LDDM-ENLTPLGRHLCTLPVDPNIGKMLLM 775
LDD+ L + R L LP DPN ++ L+
Sbjct: 1282 LDDIIRYLQGMLRRLEKLPSDPNQDRLKLI 1311
Score = 42 (19.8 bits), Expect = 7.1e-57, Sum P(3) = 7.1e-57
Identities = 11/36 (30%), Positives = 20/36 (55%)
Query: 991 GYLHFSASKTVLELIRKLRGELDKLLNRKIEDPRVD 1026
G++ +S + ++IR L+G L +L + DP D
Sbjct: 1272 GFVTYSGLSKLDDIIRYLQGMLRRL-EKLPSDPNQD 1306
>GENEDB_PFALCIPARUM|PF08_0042 [details] [associations]
symbol:PF08_0042 "ATP-dependent RNA helicase
prh1, putative" species:5833 "Plasmodium falciparum" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261 KO:K01509
EMBL:AL844507 RefSeq:XP_001349312.1 ProteinModelPortal:Q8IB47
EnsemblProtists:PF08_0042:mRNA GeneID:2655493 KEGG:pfa:PF08_0042
EuPathDB:PlasmoDB:PF3D7_0821300 ProtClustDB:CLSZ2515096
Uniprot:Q8IB47
Length = 867
Score = 364 (133.2 bits), Expect = 1.1e-56, Sum P(4) = 1.1e-56
Identities = 85/222 (38%), Positives = 127/222 (57%)
Query: 588 VLPLHGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDAL 647
+L L+ S+P Q+ IF+ PPN RK++L+TNIAE+S+TI ++ YV+D GK K +D
Sbjct: 402 ILQLYSSLPNKKQKVIFEPVPPNTRKVILSTNIAETSVTIPNIKYVIDSGKVKIKYFDVN 461
Query: 648 NKLACLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQLPEILRTPLQELC 707
L + ISK SA QR GRAGR PG Y++Y + ++ M P+ +PEI R+ L ++
Sbjct: 462 RGSNVLRVTQISKDSAIQRSGRAGREAPGQVYRIYTKEEYENMNPFLIPEIFRSDLTQIY 521
Query: 708 LHIKSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDP 767
L +K++ + F + P L V +A L K I A+D NLT LG+ LC P++P
Sbjct: 522 LELKAMNINNPLEF-NFPENPRKELFVHSAKMLFK-INAIDMNNNLTDLGKKLCLFPLNP 579
Query: 768 NIGKMLLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVD 809
+LL F C++ TI A L + F L N +++D
Sbjct: 580 IYANILLCSIEFNCIDEIATIVALLNCDSIF-LNYNFYEDLD 620
Score = 180 (68.4 bits), Expect = 1.1e-56, Sum P(4) = 1.1e-56
Identities = 44/152 (28%), Positives = 73/152 (48%)
Query: 353 ERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGM 412
+RG+ +G VGY IR ++ S +TR+ F T G+L+R+++ DP L L++DEIHER +
Sbjct: 94 KRGD-IGNYVGYTIRFKNVCSDKTRIKFVTDGILIREIMNDPLLKKYKFLILDEIHERSI 152
Query: 413 NEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGNAPTVHIPGLTFPVTDLFLEDV 472
D MSAT + ++F+++F N P + IP +T +
Sbjct: 153 RTDVLLGYTKILLQKRKKIKIILMSATFDINIFNQFFNNPPIITIPHKLHKITIYYPRRN 212
Query: 473 LEKTRYKMNSKLDSFQ-GNXXXXXXQDSKKDH 503
+E + S + GN ++ DH
Sbjct: 213 IEDYILSVVSTILQIHFGNTSYSSEFENDDDH 244
Score = 119 (46.9 bits), Expect = 1.1e-56, Sum P(4) = 1.1e-56
Identities = 21/41 (51%), Positives = 29/41 (70%)
Query: 280 KLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILE 320
+LP K K E K + +N ++++ GETGCGKTTQ+PQ I E
Sbjct: 3 ELPILKYKHEIKKLIKKNNLIIIKGETGCGKTTQVPQIINE 43
Score = 98 (39.6 bits), Expect = 1.1e-56, Sum P(4) = 1.1e-56
Identities = 38/168 (22%), Positives = 76/168 (45%)
Query: 806 KEVDEAKRSFAGDSCSDHIALLKAFDGYKDAKRNRRERDFCWENFLSPITLQMMEDMRSQ 865
K ++ A+R DH+ LL F +++A + ++ FC L+ LQ +E ++ Q
Sbjct: 699 KLINVARRKLIHPD-GDHLTLLHIFYLWQEADI-KEKKHFCNIYALNNEILQQVEKIKIQ 756
Query: 866 FLDLLSDIGFVDKSKGPSAYNRYSHDLEMVCAILCAGLYPNVVQCKRKGKRAVFYTKEVG 925
L+++ + K + P + + D ++C LC + N+ + + +
Sbjct: 757 LLEIMKN---KMKIEIPKKLHMHKWDQILIC--LCKACFFNIAKSTSNTNVYINLVNKT- 810
Query: 926 QVALHPSSVNANQNNFPLPYMVYSEMVKTNNINVYDSTNISEYALLLF 973
++ +HPSS N P ++ YS++V+T + T I LL +
Sbjct: 811 KIRIHPSSTLFNSYIKPT-FIFYSDIVQTKRLYARIVTKIEADWLLKY 857
Score = 41 (19.5 bits), Expect = 1.2e-07, Sum P(3) = 1.2e-07
Identities = 11/28 (39%), Positives = 14/28 (50%)
Query: 601 REIFDRPPPNKRKIVLATNIAESSITID 628
REI + P K K ++ I E SI D
Sbjct: 128 REIMNDPLLKKYKFLILDEIHERSIRTD 155
Score = 38 (18.4 bits), Expect = 6.0e-42, Sum P(4) = 6.0e-42
Identities = 26/129 (20%), Positives = 48/129 (37%)
Query: 453 PTVHIPGLTFPVTDLFLEDVLEKTRYKMNSKLDS-FQGNXXXXXXQDSKKDHLTALFEDV 511
P +I V L+ T Y + D + N + +K + L E
Sbjct: 209 PRRNIEDYILSVVSTILQIHFGNTSYSSEFENDDDHRENKPNELNELNKSNEQNELNESN 268
Query: 512 DIDSNYKNYRASTRASLEAWSAE---QIDLGLVESTIEYICRHEGD--GAILVFLTGWND 566
+++ + +Y ++ + + Q D + + E I + E G ILVFL G +
Sbjct: 269 EVNKEHDSYESNKTHDINEIDEQNNLQTDNISMNNINEDIKKTEDKSLGDILVFLPGQEE 328
Query: 567 ISKLLDQIK 575
I + +K
Sbjct: 329 IEMVNIMLK 337
Score = 37 (18.1 bits), Expect = 2.1e-21, Sum P(4) = 2.1e-21
Identities = 12/55 (21%), Positives = 25/55 (45%)
Query: 571 LDQIK-VNKFLGDPNKFLVLPLHGSMPTINQREIFDRPPPNKRKIVLATNIAESS 624
+D+I + L + FL + + T+N + + N++K ++ N E S
Sbjct: 594 IDEIATIVALLNCDSIFLNYNFYEDLDTLNNDSLDKKKNNNEQKKIVQKNSVEDS 648
>UNIPROTKB|Q8IB47 [details] [associations]
symbol:PF08_0042 "ATP-dependent RNA helicase prh1,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261 KO:K01509
EMBL:AL844507 RefSeq:XP_001349312.1 ProteinModelPortal:Q8IB47
EnsemblProtists:PF08_0042:mRNA GeneID:2655493 KEGG:pfa:PF08_0042
EuPathDB:PlasmoDB:PF3D7_0821300 ProtClustDB:CLSZ2515096
Uniprot:Q8IB47
Length = 867
Score = 364 (133.2 bits), Expect = 1.1e-56, Sum P(4) = 1.1e-56
Identities = 85/222 (38%), Positives = 127/222 (57%)
Query: 588 VLPLHGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDAL 647
+L L+ S+P Q+ IF+ PPN RK++L+TNIAE+S+TI ++ YV+D GK K +D
Sbjct: 402 ILQLYSSLPNKKQKVIFEPVPPNTRKVILSTNIAETSVTIPNIKYVIDSGKVKIKYFDVN 461
Query: 648 NKLACLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQLPEILRTPLQELC 707
L + ISK SA QR GRAGR PG Y++Y + ++ M P+ +PEI R+ L ++
Sbjct: 462 RGSNVLRVTQISKDSAIQRSGRAGREAPGQVYRIYTKEEYENMNPFLIPEIFRSDLTQIY 521
Query: 708 LHIKSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDP 767
L +K++ + F + P L V +A L K I A+D NLT LG+ LC P++P
Sbjct: 522 LELKAMNINNPLEF-NFPENPRKELFVHSAKMLFK-INAIDMNNNLTDLGKKLCLFPLNP 579
Query: 768 NIGKMLLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVD 809
+LL F C++ TI A L + F L N +++D
Sbjct: 580 IYANILLCSIEFNCIDEIATIVALLNCDSIF-LNYNFYEDLD 620
Score = 180 (68.4 bits), Expect = 1.1e-56, Sum P(4) = 1.1e-56
Identities = 44/152 (28%), Positives = 73/152 (48%)
Query: 353 ERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGM 412
+RG+ +G VGY IR ++ S +TR+ F T G+L+R+++ DP L L++DEIHER +
Sbjct: 94 KRGD-IGNYVGYTIRFKNVCSDKTRIKFVTDGILIREIMNDPLLKKYKFLILDEIHERSI 152
Query: 413 NEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGNAPTVHIPGLTFPVTDLFLEDV 472
D MSAT + ++F+++F N P + IP +T +
Sbjct: 153 RTDVLLGYTKILLQKRKKIKIILMSATFDINIFNQFFNNPPIITIPHKLHKITIYYPRRN 212
Query: 473 LEKTRYKMNSKLDSFQ-GNXXXXXXQDSKKDH 503
+E + S + GN ++ DH
Sbjct: 213 IEDYILSVVSTILQIHFGNTSYSSEFENDDDH 244
Score = 119 (46.9 bits), Expect = 1.1e-56, Sum P(4) = 1.1e-56
Identities = 21/41 (51%), Positives = 29/41 (70%)
Query: 280 KLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILE 320
+LP K K E K + +N ++++ GETGCGKTTQ+PQ I E
Sbjct: 3 ELPILKYKHEIKKLIKKNNLIIIKGETGCGKTTQVPQIINE 43
Score = 98 (39.6 bits), Expect = 1.1e-56, Sum P(4) = 1.1e-56
Identities = 38/168 (22%), Positives = 76/168 (45%)
Query: 806 KEVDEAKRSFAGDSCSDHIALLKAFDGYKDAKRNRRERDFCWENFLSPITLQMMEDMRSQ 865
K ++ A+R DH+ LL F +++A + ++ FC L+ LQ +E ++ Q
Sbjct: 699 KLINVARRKLIHPD-GDHLTLLHIFYLWQEADI-KEKKHFCNIYALNNEILQQVEKIKIQ 756
Query: 866 FLDLLSDIGFVDKSKGPSAYNRYSHDLEMVCAILCAGLYPNVVQCKRKGKRAVFYTKEVG 925
L+++ + K + P + + D ++C LC + N+ + + +
Sbjct: 757 LLEIMKN---KMKIEIPKKLHMHKWDQILIC--LCKACFFNIAKSTSNTNVYINLVNKT- 810
Query: 926 QVALHPSSVNANQNNFPLPYMVYSEMVKTNNINVYDSTNISEYALLLF 973
++ +HPSS N P ++ YS++V+T + T I LL +
Sbjct: 811 KIRIHPSSTLFNSYIKPT-FIFYSDIVQTKRLYARIVTKIEADWLLKY 857
Score = 41 (19.5 bits), Expect = 1.2e-07, Sum P(3) = 1.2e-07
Identities = 11/28 (39%), Positives = 14/28 (50%)
Query: 601 REIFDRPPPNKRKIVLATNIAESSITID 628
REI + P K K ++ I E SI D
Sbjct: 128 REIMNDPLLKKYKFLILDEIHERSIRTD 155
Score = 38 (18.4 bits), Expect = 6.0e-42, Sum P(4) = 6.0e-42
Identities = 26/129 (20%), Positives = 48/129 (37%)
Query: 453 PTVHIPGLTFPVTDLFLEDVLEKTRYKMNSKLDS-FQGNXXXXXXQDSKKDHLTALFEDV 511
P +I V L+ T Y + D + N + +K + L E
Sbjct: 209 PRRNIEDYILSVVSTILQIHFGNTSYSSEFENDDDHRENKPNELNELNKSNEQNELNESN 268
Query: 512 DIDSNYKNYRASTRASLEAWSAE---QIDLGLVESTIEYICRHEGD--GAILVFLTGWND 566
+++ + +Y ++ + + Q D + + E I + E G ILVFL G +
Sbjct: 269 EVNKEHDSYESNKTHDINEIDEQNNLQTDNISMNNINEDIKKTEDKSLGDILVFLPGQEE 328
Query: 567 ISKLLDQIK 575
I + +K
Sbjct: 329 IEMVNIMLK 337
Score = 37 (18.1 bits), Expect = 2.1e-21, Sum P(4) = 2.1e-21
Identities = 12/55 (21%), Positives = 25/55 (45%)
Query: 571 LDQIK-VNKFLGDPNKFLVLPLHGSMPTINQREIFDRPPPNKRKIVLATNIAESS 624
+D+I + L + FL + + T+N + + N++K ++ N E S
Sbjct: 594 IDEIATIVALLNCDSIFLNYNFYEDLDTLNNDSLDKKKNNNEQKKIVQKNSVEDS 648
>FB|FBgn0032194 [details] [associations]
symbol:CG4901 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0000390 "spliceosomal complex disassembly" evidence=ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0004386
"helicase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014134 GO:GO:0022008 GO:GO:0006200 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AY113491
RefSeq:NP_609356.2 UniGene:Dm.10854 SMR:Q9VL25 MINT:MINT-898830
STRING:Q9VL25 EnsemblMetazoa:FBtr0079947 GeneID:34357
KEGG:dme:Dmel_CG4901 UCSC:CG4901-RA FlyBase:FBgn0032194
InParanoid:Q9VL25 OrthoDB:EOG4MW6N5 GenomeRNAi:34357 NextBio:788096
Uniprot:Q9VL25
Length = 694
Score = 418 (152.2 bits), Expect = 1.9e-56, Sum P(2) = 1.9e-56
Identities = 119/382 (31%), Positives = 189/382 (49%)
Query: 557 ILVFLTGWNDISKLLDQIK-VNKF-LGDPNKFLVLPLHGSMPTINQREIFDRPPPNKRKI 614
+L+FLTG +I L QI+ + K V L+ + Q E F P N RK+
Sbjct: 284 VLIFLTGQEEIESLAQQIRQLAKIDTTGTTDLRVFTLYAQLSQGKQLECFVPTPANVRKV 343
Query: 615 VLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQ 674
+LATNIAE+SITI + V+DCG KE S++ ++ L L ISKA A QR GRAGR
Sbjct: 344 ILATNIAETSITIPGIRCVIDCGFVKEKSFNTVDGLDVLKSVRISKAQAWQRAGRAGRDA 403
Query: 675 PGVCYKLYPRIIHDAMLPYQLPEILRTPLQELCLHIKSLQLGTVGSFLSKALQPPDPLAV 734
G CY+ Y + D+ PEILRT + L + +L + +F L PP +
Sbjct: 404 DGTCYRAYTKAEMDSFADATQPEILRTNPTSMVLQLLALDIDC-NNF--DFLDPPLEDGL 460
Query: 735 QNAIELLKTIGALD--DMENLTPLGRHLCTLPVDPNIGKMLLMGAIFQCLNPALTIAAAL 792
++A + L +GA+ D +TPLGR + P+DP K+LL + F C+ L++ + L
Sbjct: 461 RSAYKSLDALGAIKTGDDSYITPLGRQMVQYPLDPKYSKLLLTASSFGCMEEILSLVSVL 520
Query: 793 AHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAKRNRRERDFCWENFLS 852
+ + FV + A F DH+ LL F+G+ ++ + + +C +N+L+
Sbjct: 521 SSDHVFVSNSEKNEMAALAHAKFQSKH-GDHLTLLNVFNGFL---KSEKPKMWCHDNYLN 576
Query: 853 PITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYSHDLEMVCAILCAGLYPNVVQCKR 912
+L ++R Q ++ + A N S D+EM+ + G + N+ +R
Sbjct: 577 LRSLTYARNVRRQLREISEHLHL--------ALNS-SDDIEMLKKCILNGFFENIAVLQR 627
Query: 913 KGKRAVFYTKEVGQVALHPSSV 934
G + + + + +HPSSV
Sbjct: 628 DGFY-ITASGNI-RSKIHPSSV 647
Score = 241 (89.9 bits), Expect = 1.9e-56, Sum P(2) = 1.9e-56
Identities = 64/194 (32%), Positives = 92/194 (47%)
Query: 278 REKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCN--IIC 335
++ LP F + LK + N +++ ETG GKTTQ+PQF+L L G N I
Sbjct: 65 QKSLPVFNCRHRILKELEANDTVLIMSETGSGKTTQIPQFLL------LAGYAKNGMIGI 118
Query: 336 TQPXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVEDPD 395
TQP E +G+TVGY +R E S T++ F T GVLLR+ ++D
Sbjct: 119 TQPRRVAAITVARRVAQELNGTIGDTVGYTVRFEDVTSRATKIRFLTDGVLLRESIKDRL 178
Query: 396 LSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXM-----SATINADLFSKYFG 450
L S +++DE HER +N D + SAT++ D F YF
Sbjct: 179 LLKYSVIILDEAHERTVNADLLFGIVKDAQKERRKQKLANLKVVVTSATMDIDHFGNYF- 237
Query: 451 NAPTVHIPGLTFPV 464
N +++ G T+PV
Sbjct: 238 NCKGMYLEGRTYPV 251
Score = 113 (44.8 bits), Expect = 3.9e-23, Sum P(2) = 3.9e-23
Identities = 37/147 (25%), Positives = 70/147 (47%)
Query: 822 DHIALLKAFDGYKDAKRNRRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKG 881
DH+ LL F+G+ ++ + + +C +N+L+ +L ++R Q ++ +
Sbjct: 549 DHLTLLNVFNGFL---KSEKPKMWCHDNYLNLRSLTYARNVRRQLREISEHLHL------ 599
Query: 882 PSAYNRYSHDLEMVCAILCAGLYPNVVQCKRKGKRAVFYTKEVGQVA--LHPSSVNANQN 939
A N S D+EM+ + G + N+ +R G FY G + +HPSSV
Sbjct: 600 --ALNS-SDDIEMLKKCILNGFFENIAVLQRDG----FYITASGNIRSKIHPSSVL--HG 650
Query: 940 NFPLPYMVYSEMVKTNNINVYDSTNIS 966
+ Y++++E+V+T + T IS
Sbjct: 651 KYKPSYILFTEIVQTEQTFLRQVTEIS 677
>UNIPROTKB|E2RPC8 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 EMBL:AAEX03006584 EMBL:AAEX03006585
Ensembl:ENSCAFT00000027962 Uniprot:E2RPC8
Length = 781
Score = 393 (143.4 bits), Expect = 6.5e-56, Sum P(2) = 6.5e-56
Identities = 127/432 (29%), Positives = 214/432 (49%)
Query: 540 LVESTIEYICRHEGDGAILVFLTGWNDISK---LLDQ----IKVNKFLGDP--NKFLVLP 590
+V+ T++ I +E G ILVFLTG +I K LL Q + + + D + L+LP
Sbjct: 259 IVKVTMD-IHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILP 317
Query: 591 LHGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKL 650
+GSM T QR IF PPP RK V++TNI+ +S+TID + YVVD G K+ +++ L
Sbjct: 318 CYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGL 377
Query: 651 ACLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLP-YQLPEILRTPLQELCLH 709
L ISK+ A QR GRAGR G C+++Y + + +P + +PEI RT L + L
Sbjct: 378 DILEVVPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLT 437
Query: 710 IKSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNI 769
+K L + V F L PP+ + A++ L A+D ++T LG + P+ P++
Sbjct: 438 LKCLAIHDVIRF--PYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHL 495
Query: 770 GKMLLMGAIFQCLNPALTIAAALAHRNPFVLPVN--MQKEVDEAKRSFAGDSCS-DHIAL 826
++ A C + L IAA L+ N F+ PV+ QKE ++ R A + + A
Sbjct: 496 TCAVIKAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRELAAKAGGFNDFAT 555
Query: 827 LKAFDGYKDAKRNRRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGP-SAY 885
L ++ K + +C ++++ L + +Q +L+ + +S P +
Sbjct: 556 LAVI--FEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLK--QQSDFPRETF 611
Query: 886 NRYSHDLEMVCAILCAGLYPNVVQCKRKGKRAVFYTKEVGQVALHPSSVNANQNNFPLPY 945
H++ C LCAG + NV + + G+ V +H + ++ L +
Sbjct: 612 EGPKHEVLRRC--LCAGYFKNVAR-RSVGRTFCTMDGRGSPVHIH-QNCKLHEQETKLEW 667
Query: 946 MVYSEMVKTNNI 957
+++ E++ T +
Sbjct: 668 IIFHEVLVTTKV 679
Score = 267 (99.0 bits), Expect = 6.5e-56, Sum P(2) = 6.5e-56
Identities = 72/227 (31%), Positives = 108/227 (47%)
Query: 248 DSAKERLNVI-LKERQEKLKSSDSGKAMLSFREKLPAFKMKAEFLKAVAENQVLVVSGET 306
D +ER + + + +R+EK +S G +F P K + + ++AV +N L+V+G T
Sbjct: 23 DLQEERPSAVSIADREEKGCTSQEGGTTPTF----PIQKQRKKLIQAVRDNSFLIVTGNT 78
Query: 307 GCGKTTQLPQFILEEELSSLRGADCNIICTQPXXXXXXXXXXXXXXERGENLGETVGYQI 366
G GKTTQLP+++ E S G I TQP E LG VGYQ+
Sbjct: 79 GSGKTTQLPKYLYEAGFSQ-HGM---IGVTQPRKVAAISVAQRVAEEMKCALGSKVGYQV 134
Query: 367 RLESKRSAQTRLLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFXXXXXXXXXX 426
R + S +T + + T G LL+ ++ DP+L+ S +++DE HER + D
Sbjct: 135 RFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQ 194
Query: 427 XXX-----XXXXXXMSATINADLFSKYFGNAPTVHIPGLTFPVTDLF 468
MSAT+ S +FGN P IPG +PV + F
Sbjct: 195 EKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKF 241
>SGD|S000004735 [details] [associations]
symbol:ECM16 "Essential DEAH-box ATP-dependent RNA helicase
specific to U3 snoRNP" species:4932 "Saccharomyces cerevisiae"
[GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0000462 "maturation
of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP] [GO:0042254 "ribosome biogenesis"
evidence=IEA;IDA;TAS] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0030686 "90S
preribosome" evidence=IDA] [GO:0003724 "RNA helicase activity"
evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 SGD:S000004735 GO:GO:0005739 GO:GO:0005524
GO:GO:0005730 GO:GO:0003723 EMBL:BK006946 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0030686 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0032040 GO:GO:0008026
GO:GO:0003724 GO:GO:0000462 EMBL:Z48622 PIR:S53058
RefSeq:NP_013847.1 ProteinModelPortal:Q04217 SMR:Q04217
DIP:DIP-6722N IntAct:Q04217 MINT:MINT-614026 STRING:Q04217
PaxDb:Q04217 PeptideAtlas:Q04217 PRIDE:Q04217 EnsemblFungi:YMR128W
GeneID:855158 KEGG:sce:YMR128W CYGD:YMR128w
GeneTree:ENSGT00550000074985 HOGENOM:HOG000201240 KO:K14780
OMA:HQLKREE OrthoDB:EOG4KM2B8 NextBio:978575 Genevestigator:Q04217
GermOnline:YMR128W Uniprot:Q04217
Length = 1267
Score = 420 (152.9 bits), Expect = 6.7e-56, Sum P(4) = 6.7e-56
Identities = 90/220 (40%), Positives = 132/220 (60%)
Query: 582 DPNKFLVLPLHGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKE 641
DP VLPL+ +PT Q +F +PP R ++ATN+AE+S+TI V YVVD G++KE
Sbjct: 727 DP--LYVLPLYSLLPTKEQMRVFQKPPQGSRLCIVATNVAETSLTIPGVRYVVDSGRSKE 784
Query: 642 TSYDALNKLACLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRII--HDAMLPYQLPEIL 699
Y+ N + W+SKASA+QR GRAGR PG CY+LY + HD + PEIL
Sbjct: 785 RKYNESNGVQSFEVGWVSKASANQRSGRAGRTGPGHCYRLYSSAVFEHD-FEQFSKPEIL 843
Query: 700 RTPLQELCLHIKSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRH 759
R P++ + L +KS+ + + +F PPD +A+ AI+LL+ +GALD+ E +T G+
Sbjct: 844 RMPVESIVLQMKSMAIHNIINFPFPT--PPDRVALSKAIQLLQYLGALDNKEMITEDGKK 901
Query: 760 LCTLPVDPNIGKMLLMGAIFQCLNPALTIAAALAHRNPFV 799
+ P+ P KMLL+ CL + I +AL+ +PF+
Sbjct: 902 MSLFPLSPRFSKMLLVSDEKACLPYIVAIVSALSVGDPFI 941
Score = 238 (88.8 bits), Expect = 6.7e-56, Sum P(4) = 6.7e-56
Identities = 52/140 (37%), Positives = 78/140 (55%)
Query: 278 REKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCN--IIC 335
R +LP F + + ++A+ N V+++ GETG GKTTQ+PQF+ E + D +
Sbjct: 388 RIQLPVFGEEHKIMEAIHHNDVVIICGETGSGKTTQVPQFLYEAGFGAEDSPDYPGMVGI 447
Query: 336 TQPXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVEDPD 395
TQP E G++ G VGYQIR +S T++ F T GVLLR+++ D
Sbjct: 448 TQPRRVAAVSMAERVANELGDH-GHKVGYQIRFDSTAKEDTKVKFMTDGVLLREMMHDFK 506
Query: 396 LSCVSHLLVDEIHERGMNED 415
L+ S +++DE HER +N D
Sbjct: 507 LTKYSSIIIDEAHERNINTD 526
Score = 54 (24.1 bits), Expect = 6.7e-56, Sum P(4) = 6.7e-56
Identities = 10/21 (47%), Positives = 17/21 (80%)
Query: 555 GAILVFLTGWNDISKLLDQIK 575
GAILVFLTG +I+ ++ +++
Sbjct: 620 GAILVFLTGQQEITHMVKRLR 640
Score = 49 (22.3 bits), Expect = 6.7e-56, Sum P(4) = 6.7e-56
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 927 VALHPSSVNANQNNFPLPYMVY 948
V +HP+S+ N P YM+Y
Sbjct: 1133 VYIHPTSILNNLGEMPPKYMLY 1154
>SGD|S000001561 [details] [associations]
symbol:DHR2 "Predominantly nucleolar DEAH-box ATP-dependent
RNA helicase" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0003724 "RNA helicase activity"
evidence=IDA] [GO:0042254 "ribosome biogenesis" evidence=IDA;TAS]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 SGD:S000001561 GO:GO:0005524 GO:GO:0005730
EMBL:BK006944 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
GO:GO:0003724 GO:GO:0000462 EMBL:AF005090 EMBL:L15328 EMBL:X75560
EMBL:Z28078 PIR:S37903 RefSeq:NP_012845.1 ProteinModelPortal:P36009
SMR:P36009 DIP:DIP-6424N IntAct:P36009 MINT:MINT-677951
STRING:P36009 PaxDb:P36009 PeptideAtlas:P36009 EnsemblFungi:YKL078W
GeneID:853784 KEGG:sce:YKL078W CYGD:YKL078w KO:K14781 OMA:PGQEEID
OrthoDB:EOG4F7RTB NextBio:974906 Genevestigator:P36009
GermOnline:YKL078W Uniprot:P36009
Length = 735
Score = 333 (122.3 bits), Expect = 1.7e-54, Sum P(2) = 1.7e-54
Identities = 130/436 (29%), Positives = 208/436 (47%)
Query: 540 LVESTIEYICR-HEGD--GAILVFLTGWNDISKLLDQI-KVNKFLGD--PNKFLV-LPLH 592
+V++ I + ++G+ G IL FL G +I K + + K+ K++ D P +V PL+
Sbjct: 275 IVDAVIRCCIQINQGEELGDILCFLPGQEEIDKAVTIMEKIAKYVSDEAPVPLIVPYPLY 334
Query: 593 GSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLAC 652
++P + Q +F KRK+V +TNIAE+S+TI V +VVD G K + LA
Sbjct: 335 AALPAVQQSLVFAPIKGFKRKVVFSTNIAETSVTISGVKFVVDSGLRKVKVWRHQLGLAT 394
Query: 653 LLPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQL-PEILRTPLQELCLHIK 711
LL IS+ASA QR GRAGR G ++LY + LP Q PEI R+ + L +K
Sbjct: 395 LLTVPISQASAMQRSGRAGRESEGKSFRLYCESDY-VKLPKQSEPEIARSDVTSPVLMLK 453
Query: 712 SLQLGTVGSFLSKA-LQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIG 770
+ G V L+ + P A+ ++ L +GALD +T G+ + LP+ P++
Sbjct: 454 --RYG-VDDLLNWTWFENPGKEAIVMGLQELYELGALDTRGKITKRGQQMALLPLQPHLS 510
Query: 771 KMLLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQK-EVDEAKRSF--AGDSCSDHIALL 827
+L+ + CL+ + I + L+ N + P ++ EV+E + S AG D I L
Sbjct: 511 SVLIKASEVGCLSQVIDIVSCLSVENLLLNPSPEERDEVNERRLSLCNAGKRYGDLIMLK 570
Query: 828 KAFDGY-----KDAKRNRRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGP 882
+ FD Y K + D+C +S + + +R Q + F S+
Sbjct: 571 ELFDIYFYELGKSQDASSERNDWCKGLCISIRGFKNVIRVRDQLRVYCKRL-FSSISEED 629
Query: 883 SAYNRYSHDLEMVCAIL-C--AGLYPNV-VQCKRKGKRAVFYTKEVGQVALHPSSVNANQ 938
+ D E++ IL C G N + + R V T E +++HPSS+
Sbjct: 630 EESKKIGEDGELISKILKCFLTGFIKNTAIGMPDRSYRTVS-TGE--PISIHPSSMLFM- 685
Query: 939 NNFPLPYMVYSEMVKT 954
N P ++Y+E V T
Sbjct: 686 -NKSCPGIMYTEYVFT 700
Score = 316 (116.3 bits), Expect = 1.7e-54, Sum P(2) = 1.7e-54
Identities = 86/276 (31%), Positives = 134/276 (48%)
Query: 197 MSIETERRVGNLLNSSQGNVPVNDSGIESSEVARRPKLSVKVANTISPPQ-SDSAKERLN 255
M+ + RV + S + V N ++ +R VK ++ SD + N
Sbjct: 1 MAANSNSRVASNHTSKKQKVRRNIHPFTNNTRIKRASKIVKFNDSGEGDHVSDQRSNKEN 60
Query: 256 VILKERQEKLKSSDSGKAMLSFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLP 315
V L + K ++SD +L RE LP ++ K E + + N V V+ GETG GK+TQ+P
Sbjct: 61 V-LTYKSLKSRASD----LLKMRETLPVYQHKREIMSYIESNPVTVLIGETGSGKSTQIP 115
Query: 316 QFILEEELSSLRGADCNIICTQPXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQ 375
QF+LE+ + + +I TQP E G LGE VGY +R ++ + +
Sbjct: 116 QFVLEKLYDTKKHG--SIAVTQPRRVAAINLATRVAQEHGCKLGEQVGYSVRFDNTTTTR 173
Query: 376 TRLLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXX-XXXXX 434
TRL + T G+LLR+L+ + DL S +++DE HER + D
Sbjct: 174 TRLKYLTDGMLLRELMMNSDLREYSVIVIDEAHERTVLTDLILGFLKSLIQGPRPDLRII 233
Query: 435 XMSATINADLFSKYFGNAPTVHIPGLTFPVTDLFLE 470
MSAT+ A+ FS++F NAP + + G F V +L+
Sbjct: 234 VMSATLQAEKFSEFFNNAPILFVEGRKFDVKQYYLK 269
>POMBASE|SPAPB1A10.06c [details] [associations]
symbol:SPAPB1A10.06c "ATP-dependent RNA helicase Dhr1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISM] [GO:0005524 "ATP binding" evidence=ISM] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0030490 "maturation of SSU-rRNA" evidence=ISO] [GO:0032040
"small-subunit processome" evidence=ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPAPB1A10.06c
GO:GO:0005524 EMBL:CU329670 GO:GO:0005730 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 GO:GO:0032040
GO:GO:0030490 HOGENOM:HOG000201240 KO:K14780 OMA:HQLKREE
OrthoDB:EOG4KM2B8 EMBL:AB027915 RefSeq:NP_593520.1
ProteinModelPortal:Q9HDY4 STRING:Q9HDY4
EnsemblFungi:SPAPB1A10.06c.1 GeneID:2543371 KEGG:spo:SPAPB1A10.06c
NextBio:20804386 Uniprot:Q9HDY4
Length = 1183
Score = 418 (152.2 bits), Expect = 1.3e-53, Sum P(4) = 1.3e-53
Identities = 93/253 (36%), Positives = 142/253 (56%)
Query: 588 VLPLHGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDAL 647
VLPL+ + T +Q ++FD P R ++ATN+AE+SITI ++ YVVDCGKAKE Y+
Sbjct: 704 VLPLYSLLTTEDQMKVFDSSPEGHRMCIVATNVAETSITIPNIRYVVDCGKAKERVYNEK 763
Query: 648 NKLACLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLP-YQLPEILRTPLQEL 706
+ WISKA+A QR GRAGR PG CY+LY + D+ P + LPEILRTP++ +
Sbjct: 764 TSVQKFEVRWISKANADQRAGRAGRTGPGHCYRLYSSAVFDSSFPLHSLPEILRTPVESI 823
Query: 707 CLHIKSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVD 766
L +K++ + + +F P ++ +++LL +GA+D LT LG + P+
Sbjct: 824 VLQMKNMNIDNIANFPFPT--SPGRSRLEKSLKLLSNLGAIDSEGVLTKLGEQMSLFPLS 881
Query: 767 PNIGKMLLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEV-DEAKRSFAGDSCSDHIA 825
P KML++G CL + + +AL+ FV ++ + D+ RS D D
Sbjct: 882 PRFSKMLIIGQQHGCLPYVIALVSALSINQLFVSKQSLLYDAHDKNSRSEETDLIDDDE- 940
Query: 826 LLKAFDGYKDAKR 838
+K + YK+ R
Sbjct: 941 -IKQKEEYKNRMR 952
Score = 207 (77.9 bits), Expect = 1.3e-53, Sum P(4) = 1.3e-53
Identities = 50/139 (35%), Positives = 69/139 (49%)
Query: 278 REKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIIC-T 336
R LP + ++ + N V+++ G TG GKTTQLPQF+ E SS + +I T
Sbjct: 395 RLALPIVAEEQRIMEQIFANDVVIICGATGSGKTTQLPQFLFEAGFSSPESENPGMIAIT 454
Query: 337 QPXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVEDPDL 396
QP E V YQIR +S + T + F T G+LLR+L D L
Sbjct: 455 QPRRVAAVSIAKRVSEEL-TGFSSKVSYQIRFDSTINPDTAIKFMTDGILLRELSSDFLL 513
Query: 397 SCVSHLLVDEIHERGMNED 415
+ S ++VDE HER +N D
Sbjct: 514 TAYSAVIVDEAHERSVNTD 532
Score = 61 (26.5 bits), Expect = 1.3e-53, Sum P(4) = 1.3e-53
Identities = 16/47 (34%), Positives = 25/47 (53%)
Query: 824 IALLKAFDGYKDAKRNRRERDFCWENFLSPITLQMMEDMRSQFLDLL 870
++LL A Y A R+ FC EN+L L+ + ++R Q + LL
Sbjct: 971 LSLLSAVCAYDYASDKRK---FCKENYLREKALEEVTNLRKQIIGLL 1014
Score = 51 (23.0 bits), Expect = 1.3e-53, Sum P(4) = 1.3e-53
Identities = 9/21 (42%), Positives = 15/21 (71%)
Query: 555 GAILVFLTGWNDISKLLDQIK 575
G+ILVFLTG ++ +L ++
Sbjct: 625 GSILVFLTGQQEVEQLCQMLR 645
Score = 41 (19.5 bits), Expect = 1.1e-12, Sum P(3) = 1.1e-12
Identities = 9/28 (32%), Positives = 16/28 (57%)
Query: 696 PEILRTPLQELCLHIKSLQLGTVGSFLS 723
P+ L+ ++CL K L G++ FL+
Sbjct: 605 PDYLQDAFDKVCLIHKRLPAGSILVFLT 632
>UNIPROTKB|G4NGS5 [details] [associations]
symbol:MGG_04040 "DEAH box polypeptide 37" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
EMBL:CM001236 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K14780
RefSeq:XP_003719802.1 ProteinModelPortal:G4NGS5
EnsemblFungi:MGG_04040T0 GeneID:2677154 KEGG:mgr:MGG_04040
Uniprot:G4NGS5
Length = 1185
Score = 574 (207.1 bits), Expect = 1.4e-53, Sum P(2) = 1.4e-53
Identities = 178/555 (32%), Positives = 265/555 (47%)
Query: 276 SFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNII- 334
S R LP + ++A+ N ++VV G TG GKTTQ+PQF+ E S +I
Sbjct: 352 SARLALPVVSEEQRIMEAIHNNNIVVVCGATGSGKTTQIPQFLFEAGYGSPDSPTPGMIG 411
Query: 335 CTQPXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVEDP 394
TQP E G++ + VGYQIR E + T + F T GVLLR++ +D
Sbjct: 412 ITQPRRVAAVSMSKRVAEELGDH-SQKVGYQIRFEGTVNKDTAVKFMTDGVLLREVAQDL 470
Query: 395 DLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXX----------MSATINA-D 443
L S ++VDE HER +N D MSAT+ D
Sbjct: 471 ALRKYSAIVVDEAHERSVNTDILIGMLSRIIKLRAEMAQEDPTVKPLKLVIMSATLRIED 530
Query: 444 LFSK--YFGNAPTV-HIPGLTFPVTDLFLE----DVLEKTRYKMN---SKLDSFQGNXXX 493
L F P V + G +PVT F D +E+ K++ KL G
Sbjct: 531 LTENKNLFATPPPVLEVEGRQYPVTLHFARKTHHDYVEEAFRKISRGHKKLPP-GGMLVF 589
Query: 494 XXXQDS---KKDHLTALFEDVDIDSNYKNYRASTR-ASLEAWSAEQIDLGLVESTIEYIC 549
Q+ L F V N R ST+ A +EA E +D G ++
Sbjct: 590 LTGQNEITQLSKRLKLQFNGVT-SVNAPQVRISTQDAPMEA---EDVDFGDALD-VDQDD 644
Query: 550 RHEGDGAILVFLTGWNDISKLLDQIKVNKFLGDPNKFLVLPLHGSMPTINQREIFDRPPP 609
+G+G+ N+ + +I+ + P++ VLPL+ +PT Q +F+ PP
Sbjct: 645 YDDGEGSE----GDENEEEEF--KIEEEEAGTGPSRMHVLPLYSLLPTKEQLRVFEPPPD 698
Query: 610 NKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASAHQRRGR 669
R +VLATN+AE+S+TI + YV D G++KE YD L + WISKASA+QR GR
Sbjct: 699 GSRLVVLATNVAETSLTIPGIRYVFDSGRSKERKYDQLTGVQSFEVGWISKASANQREGR 758
Query: 670 AGRVQPGVCYKLYPRIIHDAMLP-YQLPEILRTPLQELCLHIKSLQLGTVGSFLSKALQP 728
AGR PG C++LY +++ L + LPE+LRT L+ + L +KS+ L V +F P
Sbjct: 759 AGRTGPGHCWRLYSSAVYERDLDEFALPELLRTSLEGVVLQLKSMNLQHVVNFPFPT--P 816
Query: 729 PDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGKMLLMGAIFQCLNPALTI 788
P+ ++ + +LLK I A+ + +T +G + P+ P ++LL+G CL+ +T+
Sbjct: 817 PERDSLVKSEKLLKYISAVSEEGRVTQVGYTMSIFPLSPRFSRILLLGHQHDCLHYTVTL 876
Query: 789 AAALAHRNPFVLPVN 803
AAL+ F+ P N
Sbjct: 877 VAALSAAEIFI-PEN 890
Score = 61 (26.5 bits), Expect = 1.4e-53, Sum P(2) = 1.4e-53
Identities = 32/128 (25%), Positives = 52/128 (40%)
Query: 170 LAVSKVPLPMYRPD--LDERHGSTEKELQMSIETERR--VGN-----LLNSSQGNVPVND 220
LA +KV ++ L + + + L ++ ER GN LL + V+D
Sbjct: 89 LAANKVDTSLFSSSKTLGQTRQTKRQALSQALNEERAGLPGNATREELLYEKREERNVSD 148
Query: 221 SGIES-SEVARRPKLSVKVANTISPPQSDSAKERLNVILKERQEKLKSSDSGKAMLSFRE 279
+S SE +PK V V++T +P LK L+ D G+ ++ R+
Sbjct: 149 QEEDSESEAQAQPKPDVLVSSTTAPAADSKTTTAAGSGLKR---PLEVDDDGRPVIQKRQ 205
Query: 280 KLPAFKMK 287
K K K
Sbjct: 206 KRGGVKTK 213
>DICTYBASE|DDB_G0287351 [details] [associations]
symbol:dhx37 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=ISS] [GO:0005732 "small nucleolar ribonucleoprotein
complex" evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0287351
GO:GO:0005524 GO:GO:0005730 GenomeReviews:CM000154_GR GO:GO:0003676
GO:GO:0042254 EMBL:AAFI02000100 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0003724 KO:K14780 GO:GO:0005732
RefSeq:XP_637255.1 STRING:Q54KG8 EnsemblProtists:DDB0235265
GeneID:8626085 KEGG:ddi:DDB_G0287351 InParanoid:Q54KG8 OMA:HERNLNT
Uniprot:Q54KG8
Length = 1461
Score = 380 (138.8 bits), Expect = 2.0e-53, Sum P(6) = 2.0e-53
Identities = 81/214 (37%), Positives = 123/214 (57%)
Query: 588 VLPLHGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDAL 647
VLPL+ ++PT Q +F PP R +V+ATN+AE+S+TI ++ YVVD G+ K+ Y+
Sbjct: 848 VLPLYSTLPTSKQMRVFQTPPLGSRLVVVATNLAETSLTIPNIKYVVDTGRVKQRYYNKD 907
Query: 648 NKLACLLPSWISKASAHQRRGRAGRVQPGVCYKLYPR-IIHDAMLPYQLPEILRTPLQEL 706
N ++ W SKASA QR GRAGR PG CY++Y + +D + PEIL P+ +
Sbjct: 908 NGISSFEVGWTSKASADQRAGRAGRTGPGHCYRIYSSAVFNDHFQQFSKPEILMIPIDGM 967
Query: 707 CLHIKSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDME-NLTPLGRHLCTLPV 765
L +KS+ + + F PPD +++ A+ L +GAL+ ++T LG + PV
Sbjct: 968 ILQMKSMGIQKITGFPFPT--PPDESSLKLALRTLINLGALEVKTFSITELGMKMSQFPV 1025
Query: 766 DPNIGKMLLMGAIFQCLNPALTIAAALAHRNPFV 799
P KMLL+G CL + I + L ++PF+
Sbjct: 1026 SPRHSKMLLLGQEHNCLPYIIAIVSILTVKDPFL 1059
Score = 239 (89.2 bits), Expect = 2.0e-53, Sum P(6) = 2.0e-53
Identities = 73/240 (30%), Positives = 111/240 (46%)
Query: 184 LDERHGSTEKELQMSIETERRVGNLLNSS--QGNVPVNDSGIESSEVARRPKLSVKVA-N 240
++E+ E+E ++ E + N +NS + N + G E E R LS K
Sbjct: 310 VEEKVKEEEEEEEIKKEELEEIANQVNSEIDRYNYSIEVFGKEEEE-NREVFLSTKTGIE 368
Query: 241 TISPPQSDS--AKERLNVILKERQEKLKSSDSGKAMLSFREKLPAFKMKAEFLKAVAENQ 298
TI S+ AK + + E+ D+ R+ LP + ++ + +N
Sbjct: 369 TIEDAMSEEVDAKPIEYNVFNVKVERKPEIDA------VRDNLPIMLEEHSIVEKIKDND 422
Query: 299 VLVVSGETGCGKTTQLPQFILEEELSSLRGADC-NII-CTQPXXXXXXXXXXXXXXERGE 356
V+++ GETG GKTTQ+PQF+ E D II TQP E
Sbjct: 423 VVIICGETGSGKTTQVPQFLYESGFGHRESGDFPGIIGVTQPRRVAAVSTAKRVAEELNV 482
Query: 357 NLGETVGYQIRLESKR-SAQTRLLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNED 415
G+ VGYQIR + K S+ ++ F T G+L+R++ D LS S +L+DE HER +N D
Sbjct: 483 EFGKEVGYQIRYDKKLDSSVNKIKFMTDGILMREVQTDFLLSQYSSILIDEAHERNLNTD 542
Score = 65 (27.9 bits), Expect = 2.0e-53, Sum P(6) = 2.0e-53
Identities = 15/64 (23%), Positives = 34/64 (53%)
Query: 821 SDHIALLKAFDGYK-DAKRNRRERD-FCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDK 878
SD +++LK Y +++ ++ D FC +NFL+ ++ + +R Q ++++ I +
Sbjct: 1118 SDLLSILKVVGAYDYQIRKSPKDIDHFCSQNFLNTKSMSEIHKLRHQLTEIVNSINQTNH 1177
Query: 879 SKGP 882
P
Sbjct: 1178 ELDP 1181
Score = 51 (23.0 bits), Expect = 2.0e-53, Sum P(6) = 2.0e-53
Identities = 15/34 (44%), Positives = 19/34 (55%)
Query: 436 MSATINADLFSK---YFGNAPTV-HIPGLTFPVT 465
MSAT+ + F+K F P V +IP FPVT
Sbjct: 585 MSATLRVEDFTKNKTLFSRPPPVINIPTRQFPVT 618
Score = 49 (22.3 bits), Expect = 2.0e-53, Sum P(6) = 2.0e-53
Identities = 14/50 (28%), Positives = 25/50 (50%)
Query: 925 GQVALHPSSVNANQNNFPLPYMVYSEMVKTNNINVYDSTNISEYALLLFG 974
G +HP+S N N Y++Y ++++T+ + T I+ L L G
Sbjct: 1256 GTCFIHPTS-NLGGVNTQAEYVIYCDIIETSRPYMKLVTEINPSWLPLLG 1304
Score = 45 (20.9 bits), Expect = 2.0e-53, Sum P(6) = 2.0e-53
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 555 GAILVFLTGWNDISKLLDQIK 575
G ILVF+TG +I L +++
Sbjct: 648 GGILVFVTGKQEIEYLCSKLR 668
Score = 40 (19.1 bits), Expect = 1.2e-14, Sum P(4) = 1.2e-14
Identities = 11/33 (33%), Positives = 15/33 (45%)
Query: 937 NQNNFPLPYMVYSEMVKTNNINVYDST-NISEY 968
NQNN +VY + + N D T NI +
Sbjct: 698 NQNNIKSSNLVYGDAEDFDFDNTVDDTFNIDNH 730
Score = 39 (18.8 bits), Expect = 4.2e-33, Sum P(6) = 4.2e-33
Identities = 12/42 (28%), Positives = 22/42 (52%)
Query: 124 KLEQMKRGEEQEMIIKRKFSRADQQTLADMAHQLGLHFHAYN 165
K+E+ + EE+E IK+ + L ++A+Q+ YN
Sbjct: 309 KVEEKVKEEEEEEEIKK-------EELEEIANQVNSEIDRYN 343
Score = 39 (18.8 bits), Expect = 6.0e-32, Sum P(5) = 6.0e-32
Identities = 16/53 (30%), Positives = 27/53 (50%)
Query: 497 QDSKKDHLTALFEDVDIDSNYKNYRASTR---ASLEAWSAEQIDLGLVESTIE 546
+ SKK ++D D++ +Y+ Y S + + L+ EQ D E+TIE
Sbjct: 155 EKSKKKFF--FWKDQDVERDYQEYNDSHQDKGSYLKDQQKEQDD-SEDENTIE 204
Score = 39 (18.8 bits), Expect = 1.3e-31, Sum P(4) = 1.3e-31
Identities = 16/64 (25%), Positives = 28/64 (43%)
Query: 546 EYICRHEGDGAILVFLTGWNDISKLLDQIKVNKFLGDPNKFLVLPLHGSMPTINQREIFD 605
EY H+ G+ L D S+ + I++N NK + + H + T + +
Sbjct: 175 EYNDSHQDKGSYLKDQQKEQDDSEDENTIELNS----TNKNVEIKKHNNKHTKDNNKEEQ 230
Query: 606 RPPP 609
+PPP
Sbjct: 231 QPPP 234
>UNIPROTKB|F1S666 [details] [associations]
symbol:F1S666 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR007502 Pfam:PF04408 SMART:SM00847 GO:GO:0004386
InterPro:IPR011709 Pfam:PF07717 GeneTree:ENSGT00550000074257
EMBL:CU914751 Ensembl:ENSSSCT00000016942 Uniprot:F1S666
Length = 410
Score = 553 (199.7 bits), Expect = 1.2e-52, P = 1.2e-52
Identities = 137/379 (36%), Positives = 207/379 (54%)
Query: 657 WISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQLPEILRTPLQELCLHIKSLQLG 716
W SK + QR+GRAGRV+PG C+ L R D + + PE+ RTPL E+ L IK L+LG
Sbjct: 8 WASKTNLEQRKGRAGRVRPGFCFHLCSRARFDRLETHMTPEMFRTPLHEIALSIKLLRLG 67
Query: 717 TVGSFLSKALQPPDPL-AVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGKMLLM 775
+G FL+KA++PP PL AV A L+ + ALD + LTPLGR L LP++P GKM++M
Sbjct: 68 GIGQFLAKAIEPP-PLDAVIEAEHTLRELDALDANDELTPLGRILAKLPIEPRFGKMMIM 126
Query: 776 GAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKD 835
G IF + TI+AA PF+ + K + R+FAG+ SDH+ALL F + D
Sbjct: 127 GCIFYVGDAICTISAATCFPEPFI---SEGKRLGYIHRNFAGNRFSDHVALLSVFQAWDD 183
Query: 836 AKRNRRERD--FCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYSHD-- 891
A+ E + FC L+ TL+M + + Q ++L + GF + + D
Sbjct: 184 ARMGGEEAEIRFCEHKRLNMATLRMTWEAKVQLKEILINSGFPEDCLLTQVFTNTGPDNN 243
Query: 892 LEMVCAILCAGLYPNVVQCKRKGKRAVFYTKEVGQVAL-HPSSVN---ANQN-NFPLPYM 946
L++V ++L G+YPNV C K KR + T+ G+ AL H SSVN ++Q+ +P P+
Sbjct: 244 LDVVISLLAFGVYPNV--CYHKEKRKILTTE--GRNALIHKSSVNCPFSSQDMKYPSPFF 299
Query: 947 VYSEMVKTNNINVYDSTNISEYALLLFGGNLIPSKTGEGIEMLGGYLHFSASKTVLELIR 1006
V+ E ++T I+ T ++ LLLF + S G+ I ++ ++ S I
Sbjct: 300 VFGEKIRTRAISAKGMTLVTPLQLLLFASKKVQSD-GQ-IVLVDDWIRLQISHEAAACIT 357
Query: 1007 KLRGELDKLLNRKIEDPRV 1025
LR ++ L+ + P +
Sbjct: 358 ALRAAMEALVVEVTKQPDI 376
>UNIPROTKB|Q5SQH5 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:CH471081 GO:GO:0003676 EMBL:BX119957 EMBL:CR753328
EMBL:CR759778 EMBL:AL732442 EMBL:BX908728 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
UniGene:Hs.485060 HGNC:HGNC:2739 EMBL:CR788240 EMBL:AL662798
EMBL:CU013522 IPI:IPI00644906 SMR:Q5SQH5 Ensembl:ENST00000376437
Ensembl:ENST00000414052 Ensembl:ENST00000445379
Ensembl:ENST00000449861 Ensembl:ENST00000451748
Ensembl:ENST00000453879 UCSC:uc003nqy.3 Uniprot:Q5SQH5
Length = 560
Score = 475 (172.3 bits), Expect = 1.5e-51, Sum P(2) = 1.5e-51
Identities = 136/409 (33%), Positives = 212/409 (51%)
Query: 529 EAWSAEQIDLGLVESTIEYICRHEGDGAILVFLTGWNDISKLLDQIKVN-KFLGDP-NKF 586
+A A+ ++ +V ++ + GD ILVFLTG +I + ++ + LG +
Sbjct: 104 KAPEADYLEACVVSVLQIHVTQPPGD--ILVFLTGQEEIEAACEMLQDRCRRLGSKIREL 161
Query: 587 LVLPLHGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDA 646
LVLP++ ++P+ Q IF PP RK+V+ATNIAE+S+TI+ ++YV+D G K+ SY+
Sbjct: 162 LVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNP 221
Query: 647 LNKLACLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQ-LPEILRTPLQE 705
+ L + SKASA+QR GRAGRV G C++LY + L +PEI RT L
Sbjct: 222 RTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGN 281
Query: 706 LCLHIKSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPV 765
+ L +KSL + + F L PP + A+E L +GAL+ + LT GR + LPV
Sbjct: 282 VVLLLKSLGIHDLMHF--DFLDPPPYETLLLALEQLYALGALNHLGELTTSGRKMAELPV 339
Query: 766 DPNIGKMLLMGAIFQCLNPALTIAAALAHRNP-FVLPVNMQKEVDEAKRSFAGDSCSDHI 824
DP + KM+L + C LT+AA L+ N F P + D A+ +F DH+
Sbjct: 340 DPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNARVNFFLPG-GDHL 398
Query: 825 ALLKAFDGYKDAKRNRRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSA 884
LL + + ++ + + +C+ENF+ +++ D+R Q LL + V S
Sbjct: 399 VLLNVYTQWAESGYSSQ---WCYENFVQFRSMRRARDVREQLEGLLERVE-VGLSSCQGD 454
Query: 885 YNRYSHDLEMVCAILCAGLYPNVVQCKRKGKRAVFYTKEVGQVALHPSS 933
Y R V + AG + + + R G R V K+ V +HP+S
Sbjct: 455 YIR-------VRKAITAGYFYHTARLTRSGYRTV---KQQQTVFIHPNS 493
Score = 96 (38.9 bits), Expect = 1.5e-51, Sum P(2) = 1.5e-51
Identities = 23/67 (34%), Positives = 32/67 (47%)
Query: 402 LLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGNAPTVHIPGLT 461
++VDE HER ++ D SAT++ FS +F +AP IPG
Sbjct: 36 VMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATMDTARFSTFFDDAPVFRIPGRR 95
Query: 462 FPVTDLF 468
FPV D+F
Sbjct: 96 FPV-DIF 101
>UNIPROTKB|Q5JP46 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AL845353 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOVERGEN:HBG039428 UniGene:Hs.485060
HGNC:HGNC:2739 IPI:IPI00292510 SMR:Q5JP46 Ensembl:ENST00000383576
UCSC:uc011ijt.2 Uniprot:Q5JP46
Length = 560
Score = 475 (172.3 bits), Expect = 1.9e-51, Sum P(2) = 1.9e-51
Identities = 136/409 (33%), Positives = 212/409 (51%)
Query: 529 EAWSAEQIDLGLVESTIEYICRHEGDGAILVFLTGWNDISKLLDQIKVN-KFLGDP-NKF 586
+A A+ ++ +V ++ + GD ILVFLTG +I + ++ + LG +
Sbjct: 104 KAPEADYLEACVVSVLQIHVTQPPGD--ILVFLTGQEEIEAACEMLQDRCRRLGSKIREL 161
Query: 587 LVLPLHGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDA 646
LVLP++ ++P+ Q IF PP RK+V+ATNIAE+S+TI+ ++YV+D G K+ SY+
Sbjct: 162 LVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNP 221
Query: 647 LNKLACLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQ-LPEILRTPLQE 705
+ L + SKASA+QR GRAGRV G C++LY + L +PEI RT L
Sbjct: 222 RTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGN 281
Query: 706 LCLHIKSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPV 765
+ L +KSL + + F L PP + A+E L +GAL+ + LT GR + LPV
Sbjct: 282 VVLLLKSLGIHDLMHF--DFLDPPPYETLLLALEQLYALGALNHLGELTTSGRKMAELPV 339
Query: 766 DPNIGKMLLMGAIFQCLNPALTIAAALAHRNP-FVLPVNMQKEVDEAKRSFAGDSCSDHI 824
DP + KM+L + C LT+AA L+ N F P + D A+ +F DH+
Sbjct: 340 DPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNARVNFFLPG-GDHL 398
Query: 825 ALLKAFDGYKDAKRNRRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSA 884
LL + + ++ + + +C+ENF+ +++ D+R Q LL + V S
Sbjct: 399 VLLNVYTQWAESGYSSQ---WCYENFVQFRSMRRARDVREQLEGLLERVE-VGLSSCQGD 454
Query: 885 YNRYSHDLEMVCAILCAGLYPNVVQCKRKGKRAVFYTKEVGQVALHPSS 933
Y R V + AG + + + R G R V K+ V +HP+S
Sbjct: 455 YIR-------VRKAITAGYFYHTARLTRSGYRTV---KQQQTVFIHPNS 493
Score = 95 (38.5 bits), Expect = 1.9e-51, Sum P(2) = 1.9e-51
Identities = 23/67 (34%), Positives = 31/67 (46%)
Query: 402 LLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGNAPTVHIPGLT 461
++VDE HER ++ D SAT++ FS +F AP IPG
Sbjct: 36 VMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATMDTARFSTFFDGAPVFRIPGRR 95
Query: 462 FPVTDLF 468
FPV D+F
Sbjct: 96 FPV-DIF 101
>UNIPROTKB|F1NWS9 [details] [associations]
symbol:TDRD9 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007140 "male meiosis" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0009566 "fertilization"
evidence=IEA] [GO:0034587 "piRNA metabolic process" evidence=IEA]
[GO:0043046 "DNA methylation involved in gamete generation"
evidence=IEA] [GO:0071547 "piP-body" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 InterPro:IPR002999
GO:GO:0005524 GO:GO:0005634 GO:GO:0009566 GO:GO:0003676
GO:GO:0004386 GO:GO:0007140 Pfam:PF00567 SMART:SM00333
PROSITE:PS50304 InterPro:IPR014001 PROSITE:PS51192 GO:GO:0034587
GeneTree:ENSGT00700000104393 GO:GO:0071547 OMA:INDWFTI
EMBL:AADN02003787 IPI:IPI00574259 Ensembl:ENSGALT00000018863
Uniprot:F1NWS9
Length = 1180
Score = 448 (162.8 bits), Expect = 2.3e-51, Sum P(2) = 2.3e-51
Identities = 132/414 (31%), Positives = 213/414 (51%)
Query: 555 GAILVFLTGWNDISKLLDQIKVNKFLGDPNKFLVLPLHGSMPTINQREIFDRPPPNKRKI 614
G++LVFL G+ +IS + F K+ V PLH + Q +F P P RK+
Sbjct: 192 GSVLVFLPGFCEIS-YMHSCLTRMF---NKKWQVYPLHSRVSLEEQNNVFLNPVPGYRKV 247
Query: 615 VLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQ 674
+L+TNIAESS+T+ DV YV+D + D L W SK + +QRRGRAGRV
Sbjct: 248 ILSTNIAESSVTVPDVKYVIDFCLTRTLFCDEETNYQSLRLCWASKTNCYQRRGRAGRVS 307
Query: 675 PGVCYKLYPRIIHDAMLPYQ-LPEILRTPLQELCLHIKSLQLGTVGSFLSKALQPPDPLA 733
G CY+L + +P + LPE+L PL L IK L +G + L+ AL PP+
Sbjct: 308 NGYCYRLVHKDFWTDCIPEKSLPEMLICPLGATVLKIKKLDMGEPKALLATALSPPNVSD 367
Query: 734 VQNAIELLKTIGAL------DDMEN--LTPLGRHLCTLPVDPNIGKMLLMGAIFQCLNPA 785
++ I LK +GAL +D + LT LG L LPVD ++GK++++G +F CL
Sbjct: 368 IERTILHLKELGALTACVQAEDQRDGELTFLGNVLVHLPVDLHLGKLIVLGHVFGCLEEC 427
Query: 786 LTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAKRN---RRE 842
L IAAAL+ RN V P + +K F+G+S SD IA++ AF ++ ++N R
Sbjct: 428 LIIAAALSLRNFIVEPFKQPIDGYRSKLFFSGNSKSDCIAIVNAFKAWQICRQNGDLRHP 487
Query: 843 RDFCWENFLSPITLQMMEDMRSQFLDLLSDI--GF-VDKSKGPSAYNR-YSHDLEMVCAI 898
+D + I ++ + ++ ++ + LL + F + + SA ++ Y + + +
Sbjct: 488 KDELEWGRSNCIHIKKVREV-AELVQLLKERVKRFNMHVNTQLSAMDQEYVYKQHFILQV 546
Query: 899 LCAG-LYPNVVQCKRKGKRAVFYTKEVGQVALHPSSVNANQNNFPLPYMVYSEM 951
+ AG YPN ++ ++ +E+G P + +N P Y+ ++++
Sbjct: 547 VMAGAFYPNYFSFQKCNEQGA--VRELG--GKDPKTTVLLRNIPPYGYLYHNQL 596
Score = 174 (66.3 bits), Expect = 2.3e-51, Sum P(2) = 2.3e-51
Identities = 47/141 (33%), Positives = 72/141 (51%)
Query: 353 ERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGM 412
ER LG VGYQ+ LE+ +A+TRLL+ TTGVLL++ V L+ +H+ VDE+HER
Sbjct: 8 ERSWTLGGFVGYQVGLENISTAETRLLYMTTGVLLQKAVSAKSLTEFTHIFVDEVHERTE 67
Query: 413 NEDFXXXXXXXXXXXXXXXXXXX-MSATINADLFSKYFGNAPTVH---------IPGLTF 462
+ DF MSATIN + + YF PT + + G +
Sbjct: 68 DMDFLLLVIRKLLRTNSQSVKIILMSATINCEEIADYFA-IPTQNGLNPACIFKVEGKPY 126
Query: 463 PVTDLFLEDVLEKTRYKMNSK 483
V + +L+D+ +++ S+
Sbjct: 127 AVEEYYLDDLKHVIHFQIPSQ 147
Score = 39 (18.8 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 8/32 (25%), Positives = 17/32 (53%)
Query: 1011 ELDKLLNRKIEDPRVDLSVEGKAVVSAVVELL 1042
+L +++ +I R+D + GK + V L+
Sbjct: 135 DLKHVIHFQIPSQRIDKPMIGKEIYEVAVSLI 166
>UNIPROTKB|F1NY80 [details] [associations]
symbol:F1NY80 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0071013 "catalytic step
2 spliceosome" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00700000104421 OMA:PSRSTWE
EMBL:AADN02054197 EMBL:AADN02054196 IPI:IPI00821409
Ensembl:ENSGALT00000038723 Uniprot:F1NY80
Length = 1170
Score = 351 (128.6 bits), Expect = 1.7e-50, Sum P(3) = 1.7e-50
Identities = 79/212 (37%), Positives = 110/212 (51%)
Query: 258 LKERQEKLKSSDSGKAMLSFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQF 317
+KE+ E K++L R+ LP F ++ E L + +N +++V GETG GKTTQL Q+
Sbjct: 515 MKEKSEARSEFAKKKSILEQRQYLPIFAVQQELLSILRDNSIVIVVGETGSGKTTQLTQY 574
Query: 318 ILEEELSSLRGADCNII-CTQPXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQT 376
+ E+ + D +I CTQP E G LGE VGY IR E S T
Sbjct: 575 LHEDGYT-----DYGMIGCTQPRRVAAMSVAKRVSEEMGVRLGEEVGYAIRFEDCTSENT 629
Query: 377 RLLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXM 436
+ + T G+LLR+ + + DL S +++DE HER +N D
Sbjct: 630 IIKYMTDGILLRESLREADLDNYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLVVT 689
Query: 437 SATINADLFSKYFGNAPTVHIPGLTFPVTDLF 468
SAT++AD F+ +FGN P HIPG TFPV LF
Sbjct: 690 SATMDADKFASFFGNVPIFHIPGRTFPVDILF 721
Score = 158 (60.7 bits), Expect = 1.7e-50, Sum P(3) = 1.7e-50
Identities = 40/106 (37%), Positives = 59/106 (55%)
Query: 555 GAILVFLTGWNDISKLLDQIKVN-KFLGDPNKFLVLPLHGSMPTINQREIFDRPPPNKRK 613
G ILVF+ G DI +QI + + L VLP++ +P+ Q +IF + P RK
Sbjct: 747 GDILVFMPGQEDIEVTSEQIVEHLEELEKAPALAVLPIYSQLPSDLQAKIFQKAPDGVRK 806
Query: 614 IVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWIS 659
++ATNIAE+S+T+D +++V+D G K L C SWIS
Sbjct: 807 CIVATNIAETSLTVDGIMFVIDSGYCKLKVSKGF--LYC---SWIS 847
Score = 158 (60.7 bits), Expect = 1.7e-50, Sum P(3) = 1.7e-50
Identities = 57/222 (25%), Positives = 95/222 (42%)
Query: 734 VQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGKMLLMGAIFQCLNPALTIAAALA 793
+Q+A+ LL G LT GR + P+DP + KML++ C + L I + L+
Sbjct: 864 LQSAL-LLPFSGGFIPPGGLTSTGRQMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLS 922
Query: 794 HRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAKRNRRERDFCWENFLSP 853
F P ++E D+ + FA SDH+ L Y K N +C ++F+
Sbjct: 923 VPAIFYRPKGREEESDQVREKFAVPE-SDHLTYLNV---YLQWKNNNYSTLWCNQHFIHA 978
Query: 854 ITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYSHDLEMVCAILCAGLYPNVVQCKRK 913
++ + ++R+Q D++ S G D ++V +CA + + K
Sbjct: 979 KAMRKVREVRAQLKDIMVQQRMSLASCGT--------DWDVVRKCICAAYFHQAAKLKGI 1030
Query: 914 GKRAVFYTKEVGQVA-LHPSSVNANQNNFPLPYMVYSEMVKT 954
G+ + G LHP+S P Y+VY E+V T
Sbjct: 1031 GE---YVNIRTGMPCHLHPTSSLFGMGYTP-DYIVYHELVMT 1068
>UNIPROTKB|E1C094 [details] [associations]
symbol:E1C094 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 EMBL:AADN02054197 EMBL:AADN02054196
IPI:IPI00591998 Ensembl:ENSGALT00000001141 Uniprot:E1C094
Length = 1164
Score = 351 (128.6 bits), Expect = 5.6e-50, Sum P(3) = 5.6e-50
Identities = 79/212 (37%), Positives = 110/212 (51%)
Query: 258 LKERQEKLKSSDSGKAMLSFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQF 317
+KE+ E K++L R+ LP F ++ E L + +N +++V GETG GKTTQL Q+
Sbjct: 512 MKEKSEARSEFAKKKSILEQRQYLPIFAVQQELLSILRDNSIVIVVGETGSGKTTQLTQY 571
Query: 318 ILEEELSSLRGADCNII-CTQPXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQT 376
+ E+ + D +I CTQP E G LGE VGY IR E S T
Sbjct: 572 LHEDGYT-----DYGMIGCTQPRRVAAMSVAKRVSEEMGVRLGEEVGYAIRFEDCTSENT 626
Query: 377 RLLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXM 436
+ + T G+LLR+ + + DL S +++DE HER +N D
Sbjct: 627 IIKYMTDGILLRESLREADLDNYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLVVT 686
Query: 437 SATINADLFSKYFGNAPTVHIPGLTFPVTDLF 468
SAT++AD F+ +FGN P HIPG TFPV LF
Sbjct: 687 SATMDADKFASFFGNVPIFHIPGRTFPVDILF 718
Score = 158 (60.7 bits), Expect = 5.6e-50, Sum P(3) = 5.6e-50
Identities = 40/106 (37%), Positives = 59/106 (55%)
Query: 555 GAILVFLTGWNDISKLLDQIKVN-KFLGDPNKFLVLPLHGSMPTINQREIFDRPPPNKRK 613
G ILVF+ G DI +QI + + L VLP++ +P+ Q +IF + P RK
Sbjct: 744 GDILVFMPGQEDIEVTSEQIVEHLEELEKAPALAVLPIYSQLPSDLQAKIFQKAPDGVRK 803
Query: 614 IVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWIS 659
++ATNIAE+S+T+D +++V+D G K L C SWIS
Sbjct: 804 CIVATNIAETSLTVDGIMFVIDSGYCKLKVSKGF--LYC---SWIS 844
Score = 153 (58.9 bits), Expect = 5.6e-50, Sum P(3) = 5.6e-50
Identities = 52/203 (25%), Positives = 87/203 (42%)
Query: 753 LTPLGRHLCTLPVDPNIGKMLLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAK 812
LT GR + P+DP + KML++ C + L I + L+ F P ++E D+ +
Sbjct: 876 LTSTGRQMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGREEESDQVR 935
Query: 813 RSFAGDSCSDHIALLKAFDGYKDAKRNRRERDFCWENFLSPITLQMMEDMRSQFLDLLSD 872
FA SDH+ L Y K N +C ++F+ ++ + ++R+Q D++
Sbjct: 936 EKFAVPE-SDHLTYLNV---YLQWKNNNYSTLWCNQHFIHAKAMRKVREVRAQLKDIMVQ 991
Query: 873 IGFVDKSKGPSAYNRYSHDLEMVCAILCAGLYPNVVQCKRKGKRAVFYTKEVGQVA-LHP 931
S G D ++V +CA + + K G+ + G LHP
Sbjct: 992 QRMSLASCGT--------DWDVVRKCICAAYFHQAAKLKGIGE---YVNIRTGMPCHLHP 1040
Query: 932 SSVNANQNNFPLPYMVYSEMVKT 954
+S P Y+VY E+V T
Sbjct: 1041 TSSLFGMGYTP-DYIVYHELVMT 1062
>TAIR|locus:2125211 [details] [associations]
symbol:AT4G01020 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR002867
InterPro:IPR004087 InterPro:IPR007087 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF01485 Pfam:PF04408 PROSITE:PS00028 PROSITE:PS00690
PROSITE:PS50089 PROSITE:PS50157 PROSITE:PS51194 SMART:SM00184
SMART:SM00322 SMART:SM00355 SMART:SM00490 SMART:SM00647
SMART:SM00847 Pfam:PF00097 Prosite:PS00518 GO:GO:0005524
GO:GO:0009507 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0003723 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 HSSP:P38398 GO:GO:0008026
EMBL:AL161491 EMBL:AL080237 KO:K12818 PIR:T10542 IPI:IPI00547897
RefSeq:NP_567206.1 UniGene:At.42970 ProteinModelPortal:P0CE10
SMR:P0CE10 PRIDE:P0CE10 EnsemblPlants:AT4G01020.1 GeneID:826439
KEGG:ath:AT4G01020 GeneFarm:1806 TAIR:At4g01020
HOGENOM:HOG000084497 PhylomeDB:P0CE10 Uniprot:P0CE10
Length = 1787
Score = 398 (145.2 bits), Expect = 3.5e-49, Sum P(3) = 3.5e-49
Identities = 122/403 (30%), Positives = 199/403 (49%)
Query: 540 LVESTIEYICRHEGDGAILVFLTGWNDISKLLDQIKVNKFLGDPNKFLVLPLHGSMPTIN 599
+V+ +E I + E +G IL FLT ++ + +F+ P+ + LPLHG +
Sbjct: 508 VVKMAVE-IHKTEKEGTILAFLTSQAEVEWACE-----RFVA-PSA-IALPLHGKLSFEE 559
Query: 600 QREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWIS 659
Q +F P +RK++ ATNIAE+S+TI V YV+D G KE+ Y+ ++ L +S
Sbjct: 560 QFMVFQNYP-GRRKVIFATNIAETSLTIPGVKYVIDSGMVKESKYEPRTGMSILKVCQVS 618
Query: 660 KASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQLPEILRTPLQELCLHIKSLQLGTVG 719
++SA QR GRAGR +PG CY+LY + D+M Q PEI R L L + +L + +
Sbjct: 619 QSSARQRAGRAGRTEPGRCYRLYSKTDFDSMNLNQEPEIRRVHLGVALLRMLALGIDNIA 678
Query: 720 SFLSKALQPPDPLAVQNAIELLKTIGALDDMEN---LTPLGRHLCTLPVDPNIGKMLLMG 776
+F + + P P A+ AI+ L +GA+ + LT G L L ++P +GK++L
Sbjct: 679 AF--EFVDAPVPEAIAMAIQNLVQLGAVVEKNGVLELTQEGHCLVKLGLEPKLGKLILGC 736
Query: 777 AIFQCLNPALTIAAALAHRNPFVLPV-NMQKEV--DEAKRSFAGDSCSDHIALLKAFDGY 833
+ + +AA +A+ + V N ++ D K F D+ D LL + +
Sbjct: 737 FRHRMGKEGIVLAAVMANASSIFCRVGNFDDKMKADRLKVQFCNDN-GDLFTLLSVYKEW 795
Query: 834 KDAKRNRRERDFCWENFLSPITLQMMEDMRSQF-LDLLSDIGFVDKSK---GPSAYNRYS 889
R+RR + +CWEN L+ +++ ED + + + ++ V S P+ ++
Sbjct: 796 ASLPRDRRNK-WCWENSLNAKSMRRCEDTVKELEICIERELTLVSPSYWVWNPNEGTKHD 854
Query: 890 HDLEMVCAILCAGLYPNVVQCKRKGKRAVFYTKEVGQVALHPS 932
L+MV + A L NV + QV LHPS
Sbjct: 855 KYLKMV---ILASLAENVAMYTGYDQLGYEVALTSQQVQLHPS 894
Score = 219 (82.2 bits), Expect = 3.5e-49, Sum P(3) = 3.5e-49
Identities = 57/211 (27%), Positives = 98/211 (46%)
Query: 281 LPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQPXX 340
LP + + + LK + Q++V+ GETG GK+TQL QF+ + ++ A +I+CTQP
Sbjct: 303 LPIYAYRRQILKKIHCEQIMVLIGETGSGKSTQLVQFLADSGVA----ASESIVCTQPRK 358
Query: 341 XXXXXXXXXXXXERGENLGE-TVGYQIRLESKRSAQTRLLFCTTGVLLRQLVEDPDLSCV 399
E E TV S +++++ T LL+ ++D LS +
Sbjct: 359 IAAMTLTDRVREESSGCYEENTVSCTPTFSSTEEISSKVVYMTDNCLLQHYMKDRSLSGI 418
Query: 400 SHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGNAPTVHIPG 459
S +++DE HER +N D MSAT +A+ S+Y + +H+ G
Sbjct: 419 SCVIIDEAHERSLNTDLLLALLRKLLSRRIDLRLVIMSATADANQLSQYLFDCGILHVNG 478
Query: 460 LTFPVTDLFLEDVLEKTRYKMNSKLDSFQGN 490
FPV ++ E+ + ++ S+ G+
Sbjct: 479 RNFPVEIVYSPSGTEEN--SVVGRIASYAGD 507
Score = 43 (20.2 bits), Expect = 3.5e-49, Sum P(3) = 3.5e-49
Identities = 19/75 (25%), Positives = 36/75 (48%)
Query: 125 LEQMKRGEEQEMIIKRKFSRADQQTLADMAHQLGLHFHAYNKGKALAVSKVPLPMYRPDL 184
L M+ G+ + + + + +Q +A + + GL F + K KAL + L + R L
Sbjct: 188 LSLMENGQGVKKV-RMEIDDKSRQ-VASFSSKRGLKFEVFEKKKALEAER-DLVVNR--L 242
Query: 185 DERHGSTEKELQMSI 199
DE + + + L+ I
Sbjct: 243 DEFNNAMKSILRYLI 257
Score = 38 (18.4 bits), Expect = 1.2e-48, Sum P(3) = 1.2e-48
Identities = 8/34 (23%), Positives = 13/34 (38%)
Query: 238 VANTISPPQSDSAKERLNVILKERQEKLKSSDSG 271
+ N + P D K+RL + L + G
Sbjct: 163 IPNVVVPSDMDELKDRLRDLFSSHVLSLMENGQG 196
>WB|WBGene00020263 [details] [associations]
symbol:T05E8.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0007413
"axonal fasciculation" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0006898 GO:GO:0040010
GO:GO:0040011 GO:GO:0003676 GO:GO:0040035 GO:GO:0007413
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
GeneTree:ENSGT00700000104241 EMBL:FO080463 PIR:T29623
RefSeq:NP_491604.3 ProteinModelPortal:O01598 SMR:O01598
STRING:O01598 PaxDb:O01598 EnsemblMetazoa:T05E8.3 GeneID:172199
KEGG:cel:CELE_T05E8.3 UCSC:T05E8.3 CTD:172199 WormBase:T05E8.3
InParanoid:O01598 OMA:KEGCIME NextBio:874451 Uniprot:O01598
Length = 856
Score = 348 (127.6 bits), Expect = 4.1e-49, Sum P(2) = 4.1e-49
Identities = 95/295 (32%), Positives = 150/295 (50%)
Query: 545 IEYICRHEGDGA-ILVFLTGWNDISKLLDQI-KVNKFL-GDPNKFLVLPLHGSMPTINQR 601
++Y+ E G ILVFLTG +I + Q+ ++N L + + +PL+ ++ Q+
Sbjct: 370 VKYVHLTEPKGRDILVFLTGSEEIEAVASQLAELNGSLPASADVLMPVPLYAALRPEKQK 429
Query: 602 EIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKA 661
E F + P RK++++TNIAE+S+TI + V+D GK K ++A N++ L +SKA
Sbjct: 430 EAFRKTPQGARKVIISTNIAETSVTIPGIRVVIDSGKVKTKRFEAFNRIDVLKVHNVSKA 489
Query: 662 SAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQLPEILRTPLQELCLHIKSLQLGTVGSF 721
A QR GRAGR PG CY+LY R +PEILR L L + ++LG
Sbjct: 490 QAKQRAGRAGRDAPGKCYRLYSREDFHKFEAENMPEILRCNLSATFLEL--MKLGMKNPH 547
Query: 722 LSKALQPPDPLAVQNAIELLKTIGALDDMEN------LTPLGRHLCTLPVDPNIGKMLLM 775
K + PP+ + A+ L ++GA+ + + LT +G C P+ P+ ++L
Sbjct: 548 RLKLIDPPETDNINAALLELTSLGAIRPVNSDRSKFALTEMGDAFCMYPLPPDHARILFQ 607
Query: 776 GAIFQCLNPALTIAAALAHRNPFVLPVNMQKE--VDEAKRSFAGDSCSDHIALLK 828
C+ A+ I AA+ F + + + VD +R F DHI LLK
Sbjct: 608 AQKEGCIMEAIKIVAAMQTDALFSGAGDSKSDADVDRIRRRFETRE-GDHITLLK 661
Score = 252 (93.8 bits), Expect = 4.1e-49, Sum P(2) = 4.1e-49
Identities = 60/203 (29%), Positives = 98/203 (48%)
Query: 278 REKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQ 337
R +LP ++ + + +A + L+V GETG GK+TQ+PQ + +++ G+ I TQ
Sbjct: 158 RPQLPIDAVEQQLMYELASQETLIVIGETGSGKSTQVPQLCVRAGIAN-SGS---IAVTQ 213
Query: 338 PXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVEDPDLS 397
P E G N+G VGY +R E+ +T++ + T G++LR+ + P L
Sbjct: 214 PRRVAAISLASRVATEMGTNIGGIVGYHVRFENATCHKTKIEYMTDGIVLRKALVSPLLD 273
Query: 398 CVSHLLVDEIHERGMNED----FXXXXXXXXXXXXXXXXXXXMSATINADLFSKYFGNAP 453
S +++DE HER ++ D MSAT+ A+ F YF NA
Sbjct: 274 KYSCVIIDEAHERSLHSDVLMCILRQCQDQRRETNNPLRLIIMSATLQAEKFQSYFNNAK 333
Query: 454 TVHIPGLTFPVTDLFLEDVLEKT 476
V + G TFP+ + + K+
Sbjct: 334 VVLVAGRTFPIEVFHVNPKINKS 356
Score = 96 (38.9 bits), Expect = 3.1e-22, Sum P(2) = 3.1e-22
Identities = 58/230 (25%), Positives = 92/230 (40%)
Query: 753 LTPLGRHLCTLPVDPNIGKMLLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKE--VDE 810
LT +G C P+ P+ ++L C+ A+ I AA+ F + + + VD
Sbjct: 585 LTEMGDAFCMYPLPPDHARILFQAQKEGCIMEAIKIVAAMQTDALFSGAGDSKSDADVDR 644
Query: 811 AKRSFAGDSCSDHIALLKA-------FDGYK-----DA---KRNR---RE-----RDFCW 847
+R F DHI LLK FD DA K N+ RE R FC
Sbjct: 645 IRRRFETRE-GDHITLLKLVLVTNQFFDQLNKKTESDARYGKANKSLEREYNQTIRKFCN 703
Query: 848 ENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYSHDLEMVCAILCAGLYPNV 907
+N ++ L+ + Q L I K ++ D + L G++ N
Sbjct: 704 DNMINEQHLKTASMIEEQ----LKQIAIEQKV----TFSTCGADFMKMRKALALGMFLNS 755
Query: 908 VQCKRKGKRAVFYTKEVGQVALHPSSVNANQNNFPLPYMVYSEMVKTNNI 957
+ R+ R + +HPSS + P Y+V+SE++KTN++
Sbjct: 756 CEYDRQEDRYRLMINPAITLKIHPSSCLSRSK--PA-YIVFSELMKTNDL 802
>WB|WBGene00021365 [details] [associations]
symbol:smgl-2 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0032940 "secretion by cell" evidence=IMP]
InterPro:IPR001650 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0009792 GO:GO:0006898 GO:GO:0040007 GO:GO:0002119
GO:GO:0032940 GO:GO:0010171 GO:GO:0040011 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GeneTree:ENSGT00700000104421 EMBL:FO081788 RefSeq:NP_500405.3
ProteinModelPortal:Q9N437 SMR:Q9N437 PaxDb:Q9N437
EnsemblMetazoa:Y37E11AM.1 GeneID:177135 KEGG:cel:CELE_Y37E11AM.1
UCSC:Y37E11AM.1 CTD:177135 WormBase:Y37E11AM.1 InParanoid:Q9N437
OMA:LRADVMC NextBio:895494 Uniprot:Q9N437
Length = 1018
Score = 419 (152.6 bits), Expect = 4.7e-49, Sum P(2) = 4.7e-49
Identities = 108/330 (32%), Positives = 172/330 (52%)
Query: 555 GAILVFLTGWNDISKLLDQIKVNKFLGDPNKFLVLPLHGSMPTINQREIFDRPPPNKRKI 614
G L+FL G +IS + + +K + N +++L LH ++ Q ++FD+ P RK
Sbjct: 292 GDALIFLNGVAEISMVAEHLK--NYAELTNGWIILMLHSTLSVEEQDKVFDQAPVGIRKC 349
Query: 615 VLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQ 674
+L+TN+AE+S+TID + +V+D GK ++ L W+SKASA+QR+GRAGR
Sbjct: 350 ILSTNVAETSVTIDGIRFVIDSGKVNLIKHEPGTGTQKLTEFWVSKASANQRKGRAGRTG 409
Query: 675 PGVCYKLYPRIIHDAMLPYQLPEILRTPLQELCLHIKSLQLGTVGSFLSKALQPPDPLAV 734
PG+CY+LY + + M + + EI R LQE+ L + SL LG + ++ P +
Sbjct: 410 PGICYRLYSQEQFEKMDDFTVSEINRVSLQEMALKMISLNLG-LDPRTFPFIEKPSEDVL 468
Query: 735 QNAIELLKTIGAL--D--DMENLTPLGRHLCTLPVDPNIGKMLLMGAIFQCLNPALTIAA 790
+E+LK L D D+ LT LG + LPV+ I KML+ G + L LT+AA
Sbjct: 469 NEGLEVLKFQRVLRSDRGDILTLTALGNMVSKLPVEVPIAKMLVYGCVVDELEVMLTVAA 528
Query: 791 ALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAKR-NRRERDFCWEN 849
L+ ++PF + E+ E + S D L+ F + K R + EN
Sbjct: 529 GLSVQSPFTNRSYRELEIVERRASLTSP-LGDPFTLISIFREWVLQKAFEGTARRWTMEN 587
Query: 850 FLSPITLQMMEDMRSQFLDLLSDIGFVDKS 879
+ L + +R+Q+ +L D G V+K+
Sbjct: 588 GIDEHRLYEISKLRAQYRQILEDAGLVEKA 617
Score = 180 (68.4 bits), Expect = 4.7e-49, Sum P(2) = 4.7e-49
Identities = 38/96 (39%), Positives = 53/96 (55%)
Query: 369 ESKRSAQTRLLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFXXXXXXXXXXXX 428
E+ +S +T+LLF T G+LLRQ+ +D L + +++DE+HER + D
Sbjct: 154 ETTKSQKTKLLFLTEGLLLRQMEKDSLLEKYNVIILDEVHERHLTSDLLIGLLRDLCTKR 213
Query: 429 XXXXXXXMSATINADLFSKYFGNAPTVHIPGLTFPV 464
MSATIN DLF YF AP V +PG FP+
Sbjct: 214 DDLKLILMSATINLDLFKGYFEGAPVVQVPGRLFPI 249
Score = 56 (24.8 bits), Expect = 4.0e-10, Sum P(2) = 4.0e-10
Identities = 32/122 (26%), Positives = 53/122 (43%)
Query: 828 KAFDGYKDAKRNRRERDFCWEN--FLSPITLQMMEDMRSQFLDLLSDIGFVD---KSKGP 882
K FD K + N R + N F + + ED+ ++ L +D+ V+ K
Sbjct: 639 KLFDLKKSQRNNDRRQKVLNANKHFDKILEDKEEEDLEAEKDPLKADVKTVEFLLSHKQR 698
Query: 883 SAYN-RYSHDL-----EMVCAILCAGLYPN--VVQCKRK---GKRAVFYTKEVGQVALHP 931
N R +H + E+V I+ AGLYPN ++ K G+ +T+ +HP
Sbjct: 699 DVENIRKTHKISRKTAEVVRVIIAAGLYPNFSILDPVNKYGYGQEMFTHTRLKPFTQIHP 758
Query: 932 SS 933
+S
Sbjct: 759 NS 760
Score = 44 (20.5 bits), Expect = 9.0e-35, Sum P(2) = 9.0e-35
Identities = 41/196 (20%), Positives = 84/196 (42%)
Query: 116 FDQNEWWGKLEQMKRGEEQEMIIKR--KFSRADQQTLADMAHQLGLHFHAYNKGKALAVS 173
F+Q++ + KL+++++ +++ I +R +F Q + GL K L
Sbjct: 125 FNQHQKFQKLQKLRKLQKELPIAERAGEFETTKSQKTKLLFLTEGLLLRQMEKDSLLEKY 184
Query: 174 KVPLPMYRPDLDERHGSTEKELQM--SIETERR-VGNLLNSSQGNVPVNDSGIESSEVAR 230
V + ++ ERH +++ + + + T+R + +L S+ N+ + E + V +
Sbjct: 185 NV---IILDEVHERHLTSDLLIGLLRDLCTKRDDLKLILMSATINLDLFKGYFEGAPVVQ 241
Query: 231 RPKLSVKVANTISP-----PQSDSAKERLNV-----ILKERQEKLKSSDSGKAMLSFREK 280
P + P QSD +++ IL+ ++ S+ G A++ F
Sbjct: 242 VPGRLFPIDVRWHPIKQFIDQSDKKTHKIDPEPYLKILELIDKQFPSTQRGDALI-FLNG 300
Query: 281 LPAFKMKAEFLKAVAE 296
+ M AE LK AE
Sbjct: 301 VAEISMVAEHLKNYAE 316
>TAIR|locus:2007003 [details] [associations]
symbol:FAS4 "FASCIATED STEM 4" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
EMBL:CP002684 GO:GO:0005524 GO:GO:0003676 EMBL:AC051630
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000201240 KO:K14780
IPI:IPI00531863 PIR:E86457 RefSeq:NP_174605.1 UniGene:At.39951
ProteinModelPortal:Q9C813 SMR:Q9C813 STRING:Q9C813 PRIDE:Q9C813
EnsemblPlants:AT1G33390.1 GeneID:840232 KEGG:ath:AT1G33390
TAIR:At1g33390 InParanoid:Q9C813 OMA:EVQWISK PhylomeDB:Q9C813
ProtClustDB:CLSN2693169 Genevestigator:Q9C813 Uniprot:Q9C813
Length = 1237
Score = 363 (132.8 bits), Expect = 9.6e-49, Sum P(4) = 9.6e-49
Identities = 97/280 (34%), Positives = 148/280 (52%)
Query: 572 DQIKVNKFLGDPNKFLVLPLHGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVV 631
+Q+K NKF P K VLPL+ + Q +F+ +R +V+ATN+AE+S+TI +
Sbjct: 636 EQVK-NKF--SPGKLRVLPLYAMLSPAAQLRVFEEVEKEERLVVVATNVAETSLTIPGIK 692
Query: 632 YVVDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAML 691
YVVD G+ K +YD+ + WIS+ASA QR GRAGR PG CY+LY + +
Sbjct: 693 YVVDTGRVKVKNYDSKTGMESYEVDWISQASASQRAGRAGRTGPGHCYRLYSSAVFSNIF 752
Query: 692 PYQ-LPEILRTPLQELCLHIKSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDM 750
LPEI++ P+ + L +KS+ + V +F PP+P A++ A LK + ALD
Sbjct: 753 EESSLPEIMKVPVDGVILLMKSMNIPKVENFPFPT--PPEPSAIREAERCLKALEALDSN 810
Query: 751 ENLTPLGRHLCTLPVDPNIGKMLLMGAIFQCLNPA-------LTIAAALAHRNPFVLPVN 803
LTPLG+ + P+ P +MLL + Q L L + A+A LP
Sbjct: 811 GGLTPLGKAMSHYPMSPRHSRMLL--TVIQMLKETRNYSRANLILGYAVAAVAALSLPNP 868
Query: 804 MQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAKRNRRER 843
+ E + K++ + D+ D +K D K K++R+E+
Sbjct: 869 LIMEFEGEKKNESKDA--DKT--VKQED--KQRKKDRKEK 902
Score = 238 (88.8 bits), Expect = 9.6e-49, Sum P(4) = 9.6e-49
Identities = 51/140 (36%), Positives = 78/140 (55%)
Query: 278 REKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLR-GADCNII-C 335
R+ LP M+ E ++A+ + +++SG+TGCGKTTQ+PQF+ E S + + II
Sbjct: 238 RKDLPIVMMEQEIMEAINRHPAVIISGQTGCGKTTQVPQFLYEAGFGSKQFSSRSGIIGI 297
Query: 336 TQPXXXXXXXXXXXXXXERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVEDPD 395
TQP E G LG+ VG+Q+R + K + + F T G+LLR++ D
Sbjct: 298 TQPRRVAVLATAKRVAFELGVRLGKEVGFQVRYDKKIGENSSIKFMTDGILLREIQNDFL 357
Query: 396 LSCVSHLLVDEIHERGMNED 415
L S +++DE HER +N D
Sbjct: 358 LRRYSVIILDEAHERSLNTD 377
Score = 48 (22.0 bits), Expect = 9.6e-49, Sum P(4) = 9.6e-49
Identities = 20/73 (27%), Positives = 35/73 (47%)
Query: 893 EMVCAILCAGLYPNVVQCKRKGKRAVFYTKEVGQVALHPSSVNANQNNFPLPYMVYSEMV 952
E++ +CAG V + R + +E V LH S + N+ P +VYSE++
Sbjct: 1006 ELLGEAICAGWADRVARKTRATEYQACAVQE--PVFLHRWS--SLINSAP-ELLVYSELL 1060
Query: 953 KTNNINVYDSTNI 965
TN ++ +T +
Sbjct: 1061 LTNRPYMHGATRV 1073
Score = 47 (21.6 bits), Expect = 9.6e-49, Sum P(4) = 9.6e-49
Identities = 8/21 (38%), Positives = 15/21 (71%)
Query: 555 GAILVFLTGWNDISKLLDQIK 575
G ILVF+TG ++ L ++++
Sbjct: 484 GGILVFVTGQREVDYLCEKLR 504
Score = 44 (20.5 bits), Expect = 3.3e-15, Sum P(4) = 3.3e-15
Identities = 16/66 (24%), Positives = 29/66 (43%)
Query: 805 QKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAKRNRRERDFCWENFLSPITLQMMEDMRS 864
+KE +A R + SD + + A ++ ++ FC N L T+ M ++
Sbjct: 899 RKEKIKAARDRFSNPSSDALTVAYALHSFEVSENGM---GFCEANGLHLKTMDEMSKLKD 955
Query: 865 QFLDLL 870
Q L L+
Sbjct: 956 QLLRLV 961
WARNING: HSPs involving 65 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.134 0.393 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1044 969 0.00096 122 3 11 22 0.40 34
38 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 315
No. of states in DFA: 625 (66 KB)
Total size of DFA: 436 KB (2209 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 85.38u 0.23s 85.61t Elapsed: 00:00:03
Total cpu time: 85.49u 0.24s 85.73t Elapsed: 00:00:03
Start: Tue May 21 09:25:19 2013 End: Tue May 21 09:25:22 2013
WARNINGS ISSUED: 2