BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 001615
(1044 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9H2U1|DHX36_HUMAN Probable ATP-dependent RNA helicase DHX36 OS=Homo sapiens GN=DHX36
PE=1 SV=2
Length = 1008
Score = 706 bits (1823), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/795 (46%), Positives = 523/795 (65%), Gaps = 33/795 (4%)
Query: 274 MLSFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNI 333
M FREKLP++ M+ E + + +QV V+SGETGCGKTTQ+ QFIL+ + +G+ C I
Sbjct: 200 MQHFREKLPSYGMQKELVNLIDNHQVTVISGETGCGKTTQVTQFILDNYIERGKGSACRI 259
Query: 334 ICTQPRRISAISVAARVSSERGENLG--ETVGYQIRLESKR-SAQTRLLFCTTGVLLRQL 390
+CTQPRRISAISVA RV++ER E+ G + GYQIRL+S+ Q +L+CTTG++L+ L
Sbjct: 260 VCTQPRRISAISVAERVAAERAESCGSGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWL 319
Query: 391 VEDPDLSCVSHLLVDEIHERGMNEDFLLIILRDLLPRRPDLRLILMSATINADLFSKYFG 450
DP LS VSH+++DEIHER + D L+ +++DLL R DL++ILMSAT+NA+ FS+YFG
Sbjct: 320 QSDPYLSSVSHIVLDEIHERNLQSDVLMTVVKDLLNFRSDLKVILMSATLNAEKFSEYFG 379
Query: 451 NAPTVHIPGLTFPVTDLFLEDVLEKTRY-------KMNSKLDSFQGNSRRSRRQDSKKDH 503
N P +HIPG TFPV + LEDV+EK RY + K QG+ R +++ +
Sbjct: 380 NCPMIHIPGFTFPVVEYLLEDVIEKIRYVPEQKEHRSQFKRGFMQGHVNRQEKEEKE--- 436
Query: 504 LTALFEDVDID---SNYKNYRASTRASLEAWSAEQIDLGLVESTIEYICRHEGDGAILVF 560
A++++ D + Y AST +E +++DL L+ + I YI E DGAILVF
Sbjct: 437 --AIYKERWPDYVRELRRRYSASTVDVIEMMEDDKVDLNLIVALIRYIVLEEEDGAILVF 494
Query: 561 LTGWNDISKLLDQIKVNKFLGDPNKFLVLPLHGSMPTINQREIFDRPPPNKRKIVLATNI 620
L GW++IS L D + +++ + +KFL++PLH MPT+NQ ++F R PP RKIV+ATNI
Sbjct: 495 LPGWDNISTLHDLL-MSQVMFKSDKFLIIPLHSLMPTVNQTQVFKRTPPGVRKIVIATNI 553
Query: 621 AESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPGVCYK 680
AE+SITIDDVVYV+D GK KET +D N ++ + W+SKA+A QR+GRAGRVQPG CY
Sbjct: 554 AETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGHCYH 613
Query: 681 LYPRIIHDAMLPYQLPEILRTPLQELCLHIKSLQLGTVGSFLSKALQPPDPLAVQNAIEL 740
LY + + YQLPEILRTPL+ELCL IK L+LG + FLS+ + PP AV +I
Sbjct: 614 LYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYFLSRLMDPPSNEAVLLSIRH 673
Query: 741 LKTIGALDDMENLTPLGRHLCTLPVDPNIGKMLLMGAIFQCLNPALTIAAALAHRNPFVL 800
L + ALD E LTPLG HL LPV+P+IGKM+L GA+F CL+P LTIAA+L+ ++PFV+
Sbjct: 674 LMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVI 733
Query: 801 PVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAKRN--RRERDFCWENFLSPITLQM 858
P+ +K D ++ A D+ SDH+ ++ AF+G+++A+R R E+D+CWE FLS TLQM
Sbjct: 734 PLGKEKIADARRKELAKDTRSDHLTVVNAFEGWEEARRRGFRYEKDYCWEYFLSSNTLQM 793
Query: 859 MEDMRSQFLDLLSDIGFVDKS--KGPSAYNRYSHDLEMVCAILCAGLYPNVVQCK----R 912
+ +M+ QF + L GFV K P + N S + +++ A++CAGLYP V + + +
Sbjct: 794 LHNMKGQFAEHLLGAGFVSSRNPKDPES-NINSDNEKIIKAVICAGLYPKVAKIRLNLGK 852
Query: 913 KGKRAVFYTKEVGQVALHPSSVNANQNNFPLPYMVYSEMVKTNNINVYDSTNISEYALLL 972
K K YTK G VA+HP SVN Q +F +++Y ++T++I +YD T +S Y LL
Sbjct: 853 KRKMVKVYTKTDGLVAVHPKSVNVEQTDFHYNWLIYHLKMRTSSIYLYDCTEVSPYCLLF 912
Query: 973 FGGNL-IPSKTGEGIEMLGGYLHFSASKTVLELIRKLRGELDKLLNRKIEDPRV----DL 1027
FGG++ I + + ++ F + + L+++LR ELD LL KIE P D
Sbjct: 913 FGGDISIQKDNDQETIAVDEWIVFQSPARIAHLVKELRKELDILLQEKIESPHPVDWNDT 972
Query: 1028 SVEGKAVVSAVVELL 1042
AV+SA+++L+
Sbjct: 973 KSRDCAVLSAIIDLI 987
>sp|Q8VHK9|DHX36_MOUSE Probable ATP-dependent RNA helicase DHX36 OS=Mus musculus GN=Dhx36
PE=2 SV=2
Length = 1001
Score = 703 bits (1814), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/888 (43%), Positives = 557/888 (62%), Gaps = 51/888 (5%)
Query: 186 ERHG-STEKELQMSIETERRVGN----LLNSSQGNVPVNDSGIESSEVARRPKLSVKVAN 240
E HG TE + I +E+++ N LLN + + D S + R + +
Sbjct: 113 EDHGYGTEVSSEKKINSEKKLDNQEKKLLNQEKKTFRITDK----SYIDRDSEYLL---- 164
Query: 241 TISPPQSDSAKERLNVILKERQEKLKSSDSGKAMLSFREKLPAFKMKAEFLKAVAENQVL 300
Q + L+ L E ++ K+ M FR+KLP++ M+ E + + +QV
Sbjct: 165 -----QENEPNLSLDQHLLEDLQRKKTDPRYIEMQRFRKKLPSYGMQKELVNLINNHQVT 219
Query: 301 VVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQPRRISAISVAARVSSERGENLGE 360
V+SGETGCGKTTQ+ QFIL+ + +G+ C I+CTQPRRISAISVA RV++ER E+ G
Sbjct: 220 VISGETGCGKTTQVTQFILDNYIERGKGSACRIVCTQPRRISAISVAERVATERAESCGN 279
Query: 361 --TVGYQIRLESKR-SAQTRLLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFL 417
+ GYQIRL+S+ Q +L+CTTG++L+ L D LS VSH+++DEIHER + D L
Sbjct: 280 GNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSDSRLSSVSHIVLDEIHERNLQSDVL 339
Query: 418 LIILRDLLPRRPDLRLILMSATINADLFSKYFGNAPTVHIPGLTFPVTDLFLEDVLEKTR 477
+ +++DLL R DL++ILMSAT+NA+ FS+YFGN P +HIPG TFPV + LED++EK R
Sbjct: 340 MTVIKDLLHFRSDLKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEKIR 399
Query: 478 Y-------KMNSKLDSFQGNSRRSRRQDSK---KDHLTALFEDVDIDSNYKNYRASTRAS 527
Y + K QG+ R +++ + K+ A +++ Y AST
Sbjct: 400 YVPDQKEHRSQFKRGFMQGHVNRQEKEEKEAIYKERWPAYIKELRT-----RYSASTVDV 454
Query: 528 LEAWSAEQIDLGLVESTIEYICRHEGDGAILVFLTGWNDISKLLDQIKVNKFLGDPNKFL 587
L+ +++DL L+ + I YI E DGAILVFL GW++IS L D + +++ + +KFL
Sbjct: 455 LQMMDDDKVDLNLIAALIRYIVLEEEDGAILVFLPGWDNISTLHDLL-MSQVMFKSDKFL 513
Query: 588 VLPLHGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDAL 647
++PLH MPT+NQ ++F + PP RKIV+ATNIAE+SITIDDVVYV+D GK KET +D
Sbjct: 514 IIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQ 573
Query: 648 NKLACLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQLPEILRTPLQELC 707
N ++ + W+SKA+A QR+GRAGRVQPG CY LY + + YQLPEILRTPL+ELC
Sbjct: 574 NNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELC 633
Query: 708 LHIKSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDP 767
L IK L+LG + FLS+ + PP AV +I+ L + ALD E LTPLG HL LPV+P
Sbjct: 634 LQIKILRLGGIAYFLSRLMDPPSNEAVVLSIKHLMELSALDKQEELTPLGVHLARLPVEP 693
Query: 768 NIGKMLLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALL 827
+IGKM+L GA+F CL+P LTIAA+L+ ++PFV+P+ +K D ++ A ++ SDH+ ++
Sbjct: 694 HIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKIADARRKELAKETRSDHLTVV 753
Query: 828 KAFDGYKDAKRN--RRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKS--KGPS 883
AF+G+++AKR R E+D+CWE FLS TLQM+ +M+ QF + L GFV K P
Sbjct: 754 NAFEGWEEAKRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRSPKDPK 813
Query: 884 AYNRYSHDLEMVCAILCAGLYPNVVQCK----RKGKRAVFYTKEVGQVALHPSSVNANQN 939
A N S + +++ A++CAGLYP V + + +K K +TK G V++HP SVN Q
Sbjct: 814 A-NINSDNEKIIKAVICAGLYPKVAKIRLNLGKKRKMVKVHTKSDGLVSIHPKSVNVEQT 872
Query: 940 NFPLPYMVYSEMVKTNNINVYDSTNISEYALLLFGGNL-IPSKTGEGIEMLGGYLHFSAS 998
+F +++Y ++T++I +YD T +S Y LL FGG++ I + I + ++ F +
Sbjct: 873 DFHYNWLIYHLKMRTSSIYLYDCTEVSPYCLLFFGGDISIQKDKDQEIIAVDEWIVFQSP 932
Query: 999 KTVLELIRKLRGELDKLLNRKIEDPRV----DLSVEGKAVVSAVVELL 1042
+ + L++ LR ELD LL KIE P D AV+SA+++L+
Sbjct: 933 ERIAHLVKGLRKELDSLLQEKIESPHPVDWDDTKSRDCAVLSAILDLI 980
>sp|Q6P158|DHX57_HUMAN Putative ATP-dependent RNA helicase DHX57 OS=Homo sapiens GN=DHX57
PE=1 SV=2
Length = 1386
Score = 612 bits (1577), Expect = e-174, Method: Compositional matrix adjust.
Identities = 352/858 (41%), Positives = 523/858 (60%), Gaps = 84/858 (9%)
Query: 266 KSSDSGKAMLSFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSS 325
++S +++L R+ LPA++ + L + ++QV+V+SG TGCGKTTQ+PQFIL++ L+
Sbjct: 529 QASRQFQSILQERQSLPAWEERETILNLLRKHQVVVISGMTGCGKTTQIPQFILDDSLNG 588
Query: 326 LRGADCNIICTQPRRISAISVAARVSSERGENLGETVGYQIRLESKRSAQTRLLFCTTGV 385
NIICTQPRRISAISVA RV+ ER E +G TVGYQIRLES +S+ TRLL+CTTGV
Sbjct: 589 PPEKVANIICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGV 648
Query: 386 LLRQLVEDPDLSCVSHLLVDEIHERGMNEDFLLIILRDLLPRRPDLRLILMSATINADLF 445
LLR+L D L VSH++VDE+HER DFLL++L+D++ +RP L++ILMSAT+NA+LF
Sbjct: 649 LLRRLEGDTALQGVSHIIVDEVHERTEESDFLLLVLKDIVSQRPGLQVILMSATLNAELF 708
Query: 446 SKYFGNAPTVHIPGLTFPVTDLFLEDVLEKTRYKMNSKLDSFQGNSRRSRRQDSKKDHLT 505
S YF + P + IPG TFPV FLED + TRY + + + S+ + + + T
Sbjct: 709 SDYFNSCPVITIPGRTFPVDQFFLEDAIAVTRYVLQDGSPYMRSMKQISKEKLKARRNRT 768
Query: 506 ALFEDVDID----------------------------SNYKNYRASTRASLEAWSAEQID 537
A FE+V+ D + YK S ++ E+++
Sbjct: 769 A-FEEVEEDLRLSLHLQDQDSVKDAVPDQQLDFKQLLARYKGVSKSVIKTMSIMDFEKVN 827
Query: 538 LGLVESTIEYIC--RHE-GDGAILVFLTGWNDISKLLDQIKVNKFLGD--PNKFLVLPLH 592
L L+E+ +E+I +H GAILVFL G +I L +Q++ N + N+ ++ PLH
Sbjct: 828 LELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVIHPLH 887
Query: 593 GSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLAC 652
S+ + Q+ +F +PP KI+++TNIAE+SITIDDVVYV+D GK KE YDA +
Sbjct: 888 SSLSSEEQQAVFVKPPAGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMES 947
Query: 653 LLPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHD-AMLPYQLPEILRTPLQELCLHIK 711
L +++S+A+A QR+GRAGRV GVC+ L+ ++ +L QLPEI R PL++LCL IK
Sbjct: 948 LEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIK 1007
Query: 712 SLQLGT---VGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPN 768
L++ + + S S+ ++PP +++ + L+ +GAL E LTPLG HL +LPVD
Sbjct: 1008 ILEMFSAHNLQSVFSRLIEPPHTDSLRASKIRLRDLGALTPDERLTPLGYHLASLPVDVR 1067
Query: 769 IGKMLLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLK 828
IGK++L G+IF+CL+PALTIAA+LA ++PFV P + ++E ++ K FA + SD++ALL+
Sbjct: 1068 IGKLMLFGSIFRCLDPALTIAASLAFKSPFVSPWDKKEEANQKKLEFAFAN-SDYLALLQ 1126
Query: 829 AFDGYKDAKRN--RRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGF----------- 875
A+ G++ + + R ++C +NFLS LQ M ++ QF +LLSDIGF
Sbjct: 1127 AYKGWQLSTKEGVRASYNYCRQNFLSGRVLQEMASLKRQFTELLSDIGFAREGLRAREIE 1186
Query: 876 --------VDKSKGPSAYNRYSHDLEMVCAILCAGLYPNVVQCKR--------------- 912
V + G A N + + +++ A+LCA LYPNVVQ K
Sbjct: 1187 KRAQGGDGVLDATGEEA-NSNAENPKLISAMLCAALYPNVVQVKSPEGKFQKTSTGAVRM 1245
Query: 913 --KGKRAVFYTKEVGQVALHPSSVNANQNNFPLPYMVYSEMVKTNNINVYDSTNISEYAL 970
K F TK G V +HPSSVN +F PY++Y E +KT+ + + D + +S Y L
Sbjct: 1246 QPKSAELKFVTKNDGYVHIHPSSVNYQVRHFDSPYLLYHEKIKTSRVFIRDCSMVSVYPL 1305
Query: 971 LLFGGNLIPSKTGEG---IEMLGGYLHF-SASKTVLELIRKLRGELDKLLNRKIEDPRVD 1026
+LFGG + + G + + G++ F +AS V EL+++LR ELD+LL KI++P +D
Sbjct: 1306 VLFGGGQVNVQLQRGEFVVSLDDGWIRFVAASHQVAELVKELRCELDQLLQDKIKNPSID 1365
Query: 1027 LSV--EGKAVVSAVVELL 1042
L G ++S +V+L+
Sbjct: 1366 LCTCPRGSRIISTIVKLV 1383
>sp|Q6P5D3|DHX57_MOUSE Putative ATP-dependent RNA helicase DHX57 OS=Mus musculus GN=Dhx57
PE=2 SV=2
Length = 1388
Score = 602 bits (1552), Expect = e-171, Method: Compositional matrix adjust.
Identities = 354/864 (40%), Positives = 531/864 (61%), Gaps = 84/864 (9%)
Query: 261 RQEKLK-SSDSGKAMLSFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFIL 319
RQ ++K +S A+L R+ LPA++ + LK ++++QV+V+SG TGCGKTTQ+PQFIL
Sbjct: 524 RQFQMKQASRQFHAILQERQLLPAWEERETILKLLSKHQVVVISGMTGCGKTTQIPQFIL 583
Query: 320 EEELSSLRGADCNIICTQPRRISAISVAARVSSERGENLGETVGYQIRLESKRSAQTRLL 379
+ L+ NIICTQPRRISAISVA RV+ ER E +G TVGYQIRLES +S+ TRLL
Sbjct: 584 DNSLNGPPERVANIICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLL 643
Query: 380 FCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFLLIILRDLLPRRPDLRLILMSAT 439
+CTTGVLLR+L D L V+H++VDE+HER DFLL++L+D++ +R L++ILMSAT
Sbjct: 644 YCTTGVLLRRLEGDATLQGVTHIIVDEVHERTEESDFLLLVLKDIVMQRATLQVILMSAT 703
Query: 440 INADLFSKYFGNAPTVHIPGLTFPVTDLFLEDVLEKTRYKMNS-----------KLDSFQ 488
++A LFSKYF P + IPG FPV FLED L TRY + + +
Sbjct: 704 LDAGLFSKYFSYCPVITIPGRAFPVDQFFLEDALAVTRYVLQDGSPYMRSMKQIAKEKLK 763
Query: 489 GNSRRSRRQDSKKD-----HLTALFEDV-----DIDSNYKN----YRASTRASLEAWSA- 533
R+ +++ ++D HL E V D ++K Y+ +++ ++ S
Sbjct: 764 ARHNRTAQEEVEEDLRLSLHLQDEEESVKDTIPDQQLDFKQLLIRYKGVSKSVIKTMSVM 823
Query: 534 --EQIDLGLVESTIEYIC--RHE-GDGAILVFLTGWNDISKLLDQIKVNKFLGD--PNKF 586
E+++L L+E+ +E+I +H GA+LVFL G +I L +Q++ N + ++
Sbjct: 824 DFEKVNLELIEALLEWIVDGKHAYPPGAVLVFLPGLAEIKMLYEQLQSNSLFNNRRSHRC 883
Query: 587 LVLPLHGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDA 646
++ PLH S+ + Q+ +F +PP KI+++TNIAE+SITIDDVVYV+D GK KE YDA
Sbjct: 884 VIHPLHSSLSSEEQQAVFVKPPMGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDA 943
Query: 647 LNKLACLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHD-AMLPYQLPEILRTPLQE 705
+ L +++S+A+A QR+GRAGRV GVC+ L+ ++ +L QLPEI R PL++
Sbjct: 944 GKGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQ 1003
Query: 706 LCLHIKSLQLGT---VGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCT 762
LCL IK L++ + + S S+ ++PP +++ + L+ +GAL E LTPLG HL +
Sbjct: 1004 LCLRIKILEMFSTHNLQSVFSRLIEPPHIDSLRASKVRLRDLGALTPDEKLTPLGYHLAS 1063
Query: 763 LPVDPNIGKMLLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSD 822
LPVD IGK++L+G+IF+CL+PALTIAA+LA ++PFV P + ++E ++ K FA + SD
Sbjct: 1064 LPVDVRIGKLMLLGSIFRCLDPALTIAASLAFKSPFVSPWDKKEEANQKKLEFAFAN-SD 1122
Query: 823 HIALLKAFDGYKDAKRN--RRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDK-- 878
++ALL A+ G++ + + R ++C +NFLS TLQ M ++ QF +LLSDIGFV +
Sbjct: 1123 YLALLCAYKGWQLSTKESARASYNYCRQNFLSGRTLQEMASLKRQFTELLSDIGFVKEGL 1182
Query: 879 -----------------SKGPSAYNRYSHDLEMVCAILCAGLYPNVVQCKR--------- 912
+ G A N + + +++ A+LCA LYPNVVQ K
Sbjct: 1183 RAKEIEKRAQGGDGVLDATGEEA-NTNAENPKLISAVLCAALYPNVVQVKTPEGKFQKTS 1241
Query: 913 --------KGKRAVFYTKEVGQVALHPSSVNANQNNFPLPYMVYSEMVKTNNINVYDSTN 964
K F TK G V +HPSSVN +F PY++Y E +KT+ + + D +
Sbjct: 1242 SGVVRLQPKSAELKFVTKNDGYVHIHPSSVNYQVRHFDSPYLLYHEKIKTSRVFIRDCSM 1301
Query: 965 ISEYALLLFGGNLIPSKTGEG---IEMLGGYLHF-SASKTVLELIRKLRGELDKLLNRKI 1020
+S Y L+LFGG + + G + + G++ F +AS V EL+++LR ELD+LL KI
Sbjct: 1302 VSVYPLVLFGGGQVNVQLQRGAFVVSLDDGWIRFVAASHQVAELVKELRCELDQLLQDKI 1361
Query: 1021 EDPRVDLSV--EGKAVVSAVVELL 1042
++P +DL G ++S +V+L+
Sbjct: 1362 KNPSMDLCSCPRGSRIISMIVKLI 1385
>sp|Q6PGC1|DHX29_MOUSE ATP-dependent RNA helicase Dhx29 OS=Mus musculus GN=Dhx29 PE=2 SV=1
Length = 1365
Score = 545 bits (1405), Expect = e-154, Method: Compositional matrix adjust.
Identities = 316/817 (38%), Positives = 491/817 (60%), Gaps = 48/817 (5%)
Query: 264 KLKSSDSGKAMLSFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEEL 323
+L+S+ + +L R++LP FK + ++ + ++V+VV+GETG GK+TQ+P F+LE+ L
Sbjct: 554 RLQSTPKYQRLLKERQQLPVFKHRDSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLL 613
Query: 324 SSLRGA-DCNIICTQPRRISAISVAARVSSERGENLG-----ETVGYQIRLESKRSAQTR 377
GA CNI+CTQPRRISA+S+A RV E G G GYQIR+ES+ S TR
Sbjct: 614 LDECGARKCNIVCTQPRRISAVSLATRVCEELGCESGPGGRNSLCGYQIRMESRASESTR 673
Query: 378 LLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFLLIILRDLLPRRPDLRLILMS 437
LL+CTTGVLLR+L ED L+ VSH++VDE+HER + DFLL+IL+++L +R DL LILMS
Sbjct: 674 LLYCTTGVLLRKLQEDGLLADVSHVIVDEVHERSVQSDFLLVILKEILQKRSDLHLILMS 733
Query: 438 ATINADLFSKYFGNAPTVHIPGLTFPVTDLFLEDVLEKTRYKMNSKLDSFQG----NSRR 493
AT+++D FS YF + P + I G ++PV LED++E+T + + + Q
Sbjct: 734 ATVDSDKFSTYFTHCPILRISGRSYPVEVFHLEDIVEETGFVLEKDSEYCQKFLEEEEEI 793
Query: 494 SRRQDSKKDHLTALFEDVDIDSN--------YKNYRASTRASLEAWSAEQIDLGLVESTI 545
+ SK + E + + S Y+ Y + T+ ++ + +I+L L+ +
Sbjct: 794 TINVTSKAGGVKKYQEYIPVQSGASPELNPFYQKYSSRTQHAILYMNPHKINLDLILELL 853
Query: 546 EYICRHEG----DGAILVFLTGWNDISKLLDQIKVNK-FLGDPNKFLVLPLHGSMPTINQ 600
Y+ + +GA+L+FL G I +L D + ++ F + ++ V+ LH + T +Q
Sbjct: 854 VYLDKSPQFRNIEGAVLIFLPGLAHIQQLYDLLSSDRRFYSE--RYQVIALHSVLSTQDQ 911
Query: 601 REIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISK 660
F PPP RKIVLATNIAE+ ITI DVV+V+D G+ KE Y ++++ L+ +++SK
Sbjct: 912 AAAFMFPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSK 971
Query: 661 ASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQLPEILRTPLQELCLHIKSLQLGTVGS 720
ASA QR+GRAGRV+ G C++LY R + L Y +PEILR PL+ELCLHI LG+
Sbjct: 972 ASALQRQGRAGRVRDGFCFRLYTRERFEGFLDYSVPEILRVPLEELCLHIMKCDLGSPED 1031
Query: 721 FLSKALQPPDPLAVQNAIELLKTIGALDDME-NLTPLGRHLCTLPVDPNIGKMLLMGAIF 779
FLSKAL PP + NA+ LL+ IGA + E LTPLG+HL LPV+ IGKML+ GAIF
Sbjct: 1032 FLSKALDPPQLQVISNAMNLLRKIGACEPNEPKLTPLGQHLAALPVNVKIGKMLIFGAIF 1091
Query: 780 QCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAKRN 839
CL P T+AA + ++PF+ P+ + E D AK S A + SDH+ + A+ G+K A++
Sbjct: 1092 GCLEPVATLAAVMTEKSPFITPIGRKDEADLAKSSLAV-ADSDHLTIYNAYLGWKKAQQE 1150
Query: 840 ---RRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFV-----DKSKGPSAYNRYSHD 891
R E +C NFL+ +L +ED++ + + L+ GF + KGP + D
Sbjct: 1151 GGFRSEISYCQRNFLNRTSLLTLEDVKQELMKLVKAAGFSSSPSWEGRKGPQTLS--FQD 1208
Query: 892 LEMVCAILCAGLYPNV--VQCKRK----GKRAVFYTKEVGQVALHPSSVNANQNNFPLPY 945
+ ++ A+L AGLY +V + C + K A G+ +HPSSVN + + +
Sbjct: 1209 IALLKAVLAAGLYDSVGKIMCTKSVDVTEKLACMVETAQGKAQVHPSSVNRDLQTY--GW 1266
Query: 946 MVYSEMVKTNNINVYDSTNISEYALLLFGGNLIPSKTGEGIEMLGGYLHFSASKTVLELI 1005
++Y E V+ + + ++T I+ + +LLFGG+ I + E + + G+++F A + +
Sbjct: 1267 LLYQEKVRYTRVYLRETTLITPFPVLLFGGD-IEVQHRERLLSVDGWIYFQAPVKIAVIF 1325
Query: 1006 RKLRGELDKLLNRKIEDPRVDLSVEGKAVVSAVVELL 1042
++LR +D +L +K+E+P+ +S+E ++ + EL+
Sbjct: 1326 KQLRVLIDSVLRKKLENPK--MSLENDKILQIITELI 1360
>sp|Q7Z478|DHX29_HUMAN ATP-dependent RNA helicase DHX29 OS=Homo sapiens GN=DHX29 PE=1 SV=2
Length = 1369
Score = 540 bits (1392), Expect = e-152, Method: Compositional matrix adjust.
Identities = 314/826 (38%), Positives = 492/826 (59%), Gaps = 63/826 (7%)
Query: 264 KLKSSDSGKAMLSFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEEL 323
KL+S+ + +L R++LP FK + ++ + ++V+VV+GETG GK+TQ+P F+LE+ L
Sbjct: 555 KLQSTPKYQKLLKERQQLPVFKHRDSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLL 614
Query: 324 -SSLRGADCNIICTQPRRISAISVAARVSSERGENLG-----ETVGYQIRLESKRSAQTR 377
+ + CNI+CTQPRRISA+S+A RV E G G GYQIR+ES+ TR
Sbjct: 615 LNEWEASKCNIVCTQPRRISAVSLANRVCDELGCENGPGGRNSLCGYQIRMESRACESTR 674
Query: 378 LLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFLLIILRDLLPRRPDLRLILMS 437
LL+CTTGVLLR+L ED LS VSH++VDE+HER + DFLLIIL+++L +R DL LILMS
Sbjct: 675 LLYCTTGVLLRKLQEDGLLSNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDLHLILMS 734
Query: 438 ATINADLFSKYFGNAPTVHIPGLTFPVTDLFLEDVLEKTRYKMNSKLDSFQG----NSRR 493
AT++++ FS YF + P + I G ++PV LED++E+T + + + Q
Sbjct: 735 ATVDSEKFSTYFTHCPILRISGRSYPVEVFHLEDIIEETGFVLEKDSEYCQKFLEEEEEV 794
Query: 494 SRRQDSKKDHLTALFEDV--------DIDSNYKNYRASTRASLEAWSAEQIDLGLVESTI 545
+ SK + E + D++ Y+ Y + T+ ++ + +I+L L+ +
Sbjct: 795 TINVTSKAGGIKKYQEYIPVQTGAHADLNPFYQKYSSRTQHAILYMNPHKINLDLILELL 854
Query: 546 EYICRHEG----DGAILVFLTGWNDISKLLDQIKVNK-FLGDPNKFLVLPLHGSMPTINQ 600
Y+ + +GA+L+FL G I +L D + ++ F + ++ V+ LH + T +Q
Sbjct: 855 AYLDKSPQFRNIEGAVLIFLPGLAHIQQLYDLLSNDRRFYSE--RYKVIALHSILSTQDQ 912
Query: 601 REIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISK 660
F PPP RKIVLATNIAE+ ITI DVV+V+D G+ KE Y ++++ L+ +++SK
Sbjct: 913 AAAFTLPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSK 972
Query: 661 ASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQLPEILRTPLQELCLHIKSLQLGTVGS 720
ASA QR+GRAGRV+ G C+++Y R + + Y +PEILR PL+ELCLHI LG+
Sbjct: 973 ASALQRQGRAGRVRDGFCFRMYTRERFEGFMDYSVPEILRVPLEELCLHIMKCNLGSPED 1032
Query: 721 FLSKALQPPDPLAVQNAIELLKTIGALDDME-NLTPLGRHLCTLPVDPNIGKMLLMGAIF 779
FLSKAL PP + NA+ LL+ IGA + E LTPLG+HL LPV+ IGKML+ GAIF
Sbjct: 1033 FLSKALDPPQLQVISNAMNLLRKIGACELNEPKLTPLGQHLAALPVNVKIGKMLIFGAIF 1092
Query: 780 QCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAKRN 839
CL+P T+AA + ++PF P+ + E D AK + A + SDH+ + A+ G+K A++
Sbjct: 1093 GCLDPVATLAAVMTEKSPFTTPIGRKDEADLAKSALAM-ADSDHLTIYNAYLGWKKARQE 1151
Query: 840 ---RRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKS-----KGPSAYNRYS-H 890
R E +C NFL+ +L +ED++ + + L+ GF + +G A S
Sbjct: 1152 GGYRSEITYCRRNFLNRTSLLTLEDVKQELIKLVKAAGFSSSTTSTSWEGNRASQTLSFQ 1211
Query: 891 DLEMVCAILCAGLYPNVVQCKRKGKRAVFYTKEV--------------GQVALHPSSVNA 936
++ ++ A+L AGLY NV GK + YTK V G+ +HPSSVN
Sbjct: 1212 EIALLKAVLVAGLYDNV------GK--IIYTKSVDVTEKLACIVETAQGKAQVHPSSVNR 1263
Query: 937 NQNNFPLPYMVYSEMVKTNNINVYDSTNISEYALLLFGGNLIPSKTGEGIEMLGGYLHFS 996
+ +++Y E ++ + + ++T I+ + +LLFGG+ I + E + + G+++F
Sbjct: 1264 DLQTH--GWLLYQEKIRYARVYLRETTLITPFPVLLFGGD-IEVQHRERLLSIDGWIYFQ 1320
Query: 997 ASKTVLELIRKLRGELDKLLNRKIEDPRVDLSVEGKAVVSAVVELL 1042
A + + ++LR +D +L +K+E+P+ +S+E ++ + EL+
Sbjct: 1321 APVKIAVIFKQLRVLIDSVLRKKLENPK--MSLENDKILQIITELI 1364
>sp|A3KMI0|DHX29_XENLA ATP-dependent RNA helicase DHX29 OS=Xenopus laevis GN=dhx29 PE=2 SV=1
Length = 1362
Score = 535 bits (1378), Expect = e-151, Method: Compositional matrix adjust.
Identities = 320/828 (38%), Positives = 487/828 (58%), Gaps = 69/828 (8%)
Query: 266 KSSDSGKA--MLSFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEEL 323
KS DS K +L+ RE+LP F L+ + ++V+VV+GETG GK+TQ+PQF+LE+ L
Sbjct: 549 KSRDSMKYKRLLNDREQLPVFARGNFILETLKRHRVIVVAGETGSGKSTQVPQFLLEDLL 608
Query: 324 -SSLRGADCNIICTQPRRISAISVAARVSSERGENLG-----ETVGYQIRLESKRSAQTR 377
+ CNI+CTQPRRISA+S+A RV E G + G GYQIR+ES+ TR
Sbjct: 609 FNGGSPGKCNIVCTQPRRISAMSLATRVCEELGCDSGPGGKNSLCGYQIRMESRTGEATR 668
Query: 378 LLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFLLIILRDLLPRRPDLRLILMS 437
LL+CTTG+LLR+L ED L +SH++VDE+HER + DFLLIILR++L +R DL L+LMS
Sbjct: 669 LLYCTTGILLRKLQEDSMLKNISHIIVDEVHERTVQSDFLLIILREILHKRSDLHLVLMS 728
Query: 438 ATINADLFSKYFGNAPTVHIPGLTFPVTDLFLEDVLEKTRYKMNSKLDSFQ--------- 488
AT++ + FS YF + P + I G TFPV LEDV+E T + + + Q
Sbjct: 729 ATVDCEKFSSYFTHCPIIRISGRTFPVEVFHLEDVVEATGFVLEQDSEYCQKFLEDEEEI 788
Query: 489 -------GNSRRSRRQDSKKDHLTALFEDVDIDSNYKNYRASTRASLEAWSAEQIDLGLV 541
G S + ++ T L D+ + Y+ Y + TR ++ + +I+L L+
Sbjct: 789 TLSVTGKGGSSKKYQEFIPAQSGTGL----DLGARYQRYSSQTRHAVLYMNPNKINLDLI 844
Query: 542 ESTIEYIC----RHEGDGAILVFLTGWNDISKLLDQIKVNKFLGDPNKFLVLPLHGSMPT 597
+ ++ +GA+L+FL G DI +L D + +K D ++ ++ LH + +
Sbjct: 845 LELLVFLDISPEYRNVEGAVLIFLPGLADIQQLYDILSSDKRFHDRRRYKLIALHSILSS 904
Query: 598 INQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSW 657
+Q E F PP RKIVLATNIAE+ ITI DVV+V+D G+ KE Y ++++ L+ ++
Sbjct: 905 QDQAEAFILPPAGTRKIVLATNIAETGITIPDVVFVIDAGRTKENRYHESSQMSSLVETF 964
Query: 658 ISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQLPEILRTPLQELCLHIKSLQLGT 717
ISKASA QR+GRAGRV+ G C++LY R ++ + Y +PEILR PL+ELCLHI LG+
Sbjct: 965 ISKASALQRQGRAGRVRNGYCFRLYTRERFESFMEYSVPEILRVPLEELCLHIMKCDLGS 1024
Query: 718 VGSFLSKALQPPDPLAVQNAIELLKTIGALD-DMENLTPLGRHLCTLPVDPNIGKMLLMG 776
FLSKAL PP + NA+ LL+ IGA + LTPLG+HL LPV+ IGKML+ G
Sbjct: 1025 PEDFLSKALDPPQLQVISNAMSLLRKIGACELSQPKLTPLGQHLAALPVNVKIGKMLIFG 1084
Query: 777 AIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDA 836
AIF CL+ T+AA + ++PFV P+ + D AK S A + SDH+ + +A+ G+K
Sbjct: 1085 AIFGCLDAVATLAATMTEKSPFVTPIGEKDRADLAKSSMAVAN-SDHVTIFRAYLGWKAI 1143
Query: 837 KRN--RRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGF-----VDKSKGPSAYNRYS 889
+ E +C +NFL+ L +ED++ + + L+ GF V+ + SA S
Sbjct: 1144 RPEGYAAEMSYCRKNFLNRKALLTIEDVKQELIRLVRAAGFECPRSVEANGLSSAMKALS 1203
Query: 890 -HDLEMVCAILCAGLYPNVVQCKRKGKRAVFYTKEV--------------GQVALHPSSV 934
+ ++ AIL AGLY NV GK + +TK V G+ +HPSSV
Sbjct: 1204 AEETSLLKAILTAGLYDNV------GK--ILFTKSVDITEKLACIVETAQGKAQVHPSSV 1255
Query: 935 NANQNNFPLPYMVYSEMVKTNNINVYDSTNISEYALLLFGGNLIPSKTGEGIEMLGGYLH 994
N + + +++Y E VK + + + ++T IS + +LLFGG+ I + E + + ++H
Sbjct: 1256 NRDLQIY--GWLLYQEKVKYSKVFLRETTLISPFPVLLFGGD-IAVQHRERLLTVDDWIH 1312
Query: 995 FSASKTVLELIRKLRGELDKLLNRKIEDPRVDLSVEGKAVVSAVVELL 1042
F A + + ++LR ++ +L +K+E+P+ +S++ +++ + EL+
Sbjct: 1313 FQAPVKIAVIFKELRILIESVLKQKLENPK--MSLKDDMILNIIKELI 1358
>sp|Q68FK8|DHX9_XENLA ATP-dependent RNA helicase A-like protein OS=Xenopus laevis GN=dhx9
PE=2 SV=1
Length = 1262
Score = 514 bits (1323), Expect = e-144, Method: Compositional matrix adjust.
Identities = 301/796 (37%), Positives = 453/796 (56%), Gaps = 30/796 (3%)
Query: 239 ANTISPPQSDSAKERLNVILKERQEKLKSSDSGKAMLSFREKLPAFKMKAEFLKAVAENQ 298
+N P + + +E++++ LK + K +L RE LP K + E + AV +
Sbjct: 348 SNIDEGPLAFATQEQISLELKNEHMYHIQDPNIKQVLIDRESLPVKKFEEEIMHAVHNSP 407
Query: 299 VLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQPRRISAISVAARVSSERGENL 358
V+++ G TGCGKTTQ+PQ+IL+E + + R A CNI+ TQPRRISA+SVA RV+ ERGE +
Sbjct: 408 VVIIRGATGCGKTTQVPQYILDEYIRNDRAAQCNIVVTQPRRISAVSVAERVAFERGEEI 467
Query: 359 GETVGYQIRLESKRS-AQTRLLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFL 417
G++ GY +R ES +LFCT GVLLR+L + + +SH++VDEIHER +N DFL
Sbjct: 468 GKSCGYSVRFESVLPRPHASMLFCTVGVLLRKL--ESGIRGISHVIVDEIHERDINTDFL 525
Query: 418 LIILRDLLPRRPDLRLILMSATINADLFSKYFGNAPTVHIPGLTFPVTDLFLEDVLEKTR 477
L++LRD++ P++R+ILMSATI+ +F +YF N P + + G TFPV + +LED ++ T+
Sbjct: 526 LVVLRDVIQAFPEIRVILMSATIDTSMFCEYFFNCPIIEVFGRTFPVQEYYLEDCIQMTQ 585
Query: 478 YKMNSKLDSFQGNSRRSRRQDSKKDHLTALFEDVDIDSNYKNYRASTRASLEAWSAEQID 537
+ + + + +L +Y TR S+ S ++
Sbjct: 586 FIPPPRDKKKKDKDEEGGDDEETNCNLVC----------GDDYGPETRRSMSQLSEKETP 635
Query: 538 LGLVESTIEYICRHEGDGAILVFLTGWNDISKLLDQIKVNKFLGDPNKFLVLPLHGSMPT 597
L L+E+ ++YI GA+LVFL GWN I + +++N G + + +LPLH +P
Sbjct: 636 LELIEALLKYIETLNVPGAVLVFLPGWNLIYAMQKHLEMNPHFGS-HSYCILPLHSQIPR 694
Query: 598 INQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSW 657
QR++FD P K++L+TNIAE+SITI+DVVYV+D K K + + N + W
Sbjct: 695 DEQRKVFDPVPDGIIKVILSTNIAETSITINDVVYVIDSCKQKVKLFTSHNNMTNYATVW 754
Query: 658 ISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQLPEILRTPLQELCLHIKSLQLGT 717
SK + QR+GRAGRV+PG C+ L + D + + PEI RTPL E+ L IK L+LG
Sbjct: 755 ASKTNLEQRKGRAGRVRPGFCFHLCSKARFDKLETHLTPEIFRTPLHEVALSIKLLRLGG 814
Query: 718 VGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGKMLLMGA 777
+G FLSKA++PP AV A L+ + ALD + LTPLGR L LP++P +GKM+++G
Sbjct: 815 IGHFLSKAIEPPPLDAVIEAEHTLRELDALDSNDELTPLGRILAKLPIEPRLGKMMIIGC 874
Query: 778 IFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAK 837
IF + TI+AA PF ++ + + R+FAG+ SDH+ALL F + DA+
Sbjct: 875 IFYVGDALCTISAATCFPEPF---ISEGRRLGYVHRNFAGNRFSDHVALLSVFQAWDDAR 931
Query: 838 RNRR--ERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYSHD--LE 893
E FC L+ TL+M + + Q D+L + GF ++ +N D L+
Sbjct: 932 MGGEDAETRFCEHKRLNMATLRMTWEAKVQLKDILVNAGFPEECLMNQVFNNTGPDNNLD 991
Query: 894 MVCAILCAGLYPNVVQCKRKGKRAVFYTKEVGQVALHPSSVN---ANQN-NFPLPYMVYS 949
+V ++L G+YPNV C K KR + T E +H SSVN +NQ+ +P P+ V+S
Sbjct: 992 VVISLLAFGVYPNV--CYHKEKRKIL-TTEGRNALIHKSSVNCPFSNQDLKYPSPFFVFS 1048
Query: 950 EMVKTNNINVYDSTNISEYALLLFGGNLIPSKTGEGIEMLGGYLHFSASKTVLELIRKLR 1009
E ++T I+ T +S LLLF + S GE I L ++ S + I LR
Sbjct: 1049 EKIRTRAISAKGMTMVSPLQLLLFASKKVMSD-GEFIH-LDDWIKLSMAHEESACITALR 1106
Query: 1010 GELDKLLNRKIEDPRV 1025
L+ L+ ++P +
Sbjct: 1107 AALEALVVEVTKEPEI 1122
>sp|Q08211|DHX9_HUMAN ATP-dependent RNA helicase A OS=Homo sapiens GN=DHX9 PE=1 SV=4
Length = 1270
Score = 508 bits (1309), Expect = e-143, Method: Compositional matrix adjust.
Identities = 296/791 (37%), Positives = 450/791 (56%), Gaps = 31/791 (3%)
Query: 245 PQSDSAKERLNVILK-ERQEKLKSSDSGKAMLSFREKLPAFKMKAEFLKAVAENQVLVVS 303
P + + E++++ LK E +L+ +A+L RE LP K ++E L+A+++N V+++
Sbjct: 351 PLAFATPEQISMDLKNELMYQLEQDHDLQAILQERELLPVKKFESEILEAISQNSVVIIR 410
Query: 304 GETGCGKTTQLPQFILEEELSSLRGADCNIICTQPRRISAISVAARVSSERGENLGETVG 363
G TGCGKTTQ+PQFIL++ + + R A+CNI+ TQPRRISA+SVA RV+ ERGE G++ G
Sbjct: 411 GATGCGKTTQVPQFILDDFIQNDRAAECNIVVTQPRRISAVSVAERVAFERGEEPGKSCG 470
Query: 364 YQIRLESKRS-AQTRLLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFLLIILR 422
Y +R ES ++FCT GVLLR+L + + +SH++VDEIHER +N DFLL++LR
Sbjct: 471 YSVRFESILPRPHASIMFCTVGVLLRKL--EAGIRGISHVIVDEIHERDINTDFLLVVLR 528
Query: 423 DLLPRRPDLRLILMSATINADLFSKYFGNAPTVHIPGLTFPVTDLFLEDVLEKTRYKMNS 482
D++ P++R++LMSATI+ +F +YF N P + + G T+PV + FLED ++ T +
Sbjct: 529 DVVQAYPEVRIVLMSATIDTSMFCEYFFNCPIIEVYGRTYPVQEYFLEDCIQMTHFVPPP 588
Query: 483 KLDSFQGNSRRSRRQDSKKDHLTALFEDVDIDSNYKNYRASTRASLEAWSAEQIDLGLVE 542
K + D +L E Y TR S+ + ++ L+E
Sbjct: 589 KDKKKKDKDDDGGEDDDANCNLICGDE----------YGPETRLSMSQLNEKETPFELIE 638
Query: 543 STIEYICRHEGDGAILVFLTGWNDISKLLDQIKVNKFLGDPNKFLVLPLHGSMPTINQRE 602
+ ++YI GA+LVFL GWN I + +++N G +++ +LPLH +P QR+
Sbjct: 639 ALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHFGS-HRYQILPLHSQIPREEQRK 697
Query: 603 IFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKAS 662
+FD P K++L+TNIAE+SITI+DVVYV+D K K + A N + W SK +
Sbjct: 698 VFDPVPVGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTN 757
Query: 663 AHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQLPEILRTPLQELCLHIKSLQLGTVGSFL 722
QR+GRAGRV+PG C+ L R + + + PE+ RTPL E+ L IK L+LG +G FL
Sbjct: 758 LEQRKGRAGRVRPGFCFHLCSRARFERLETHMTPEMFRTPLHEIALSIKLLRLGGIGQFL 817
Query: 723 SKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGKMLLMGAIFQCL 782
+KA++PP AV A L+ + ALD + LTPLGR L LP++P GKM++MG IF
Sbjct: 818 AKAIEPPPLDAVIEAEHTLRELDALDANDELTPLGRILAKLPIEPRFGKMMIMGCIFYVG 877
Query: 783 NPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAKRNRRE 842
+ TIAAA PF +N K + R+FAG+ SDH+ALL F + DA+ E
Sbjct: 878 DAICTIAAATCFPEPF---INEGKRLGYIHRNFAGNRFSDHVALLSVFQAWDDARMGGEE 934
Query: 843 RD--FCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYSHD--LEMVCAI 898
+ FC L+ TL+M + + Q ++L + GF + + D L++V ++
Sbjct: 935 AEIRFCEHKRLNMATLRMTWEAKVQLKEILINSGFPEDCLLTQVFTNTGPDNNLDVVISL 994
Query: 899 LCAGLYPNVVQCKRKGKRAVFYTKEVGQVALHPSSVN----ANQNNFPLPYMVYSEMVKT 954
L G+YPNV C K KR + T E +H SSVN + +P P+ V+ E ++T
Sbjct: 995 LAFGVYPNV--CYHKEKRKIL-TTEGRNALIHKSSVNCPFSSQDMKYPSPFFVFGEKIRT 1051
Query: 955 NNINVYDSTNISEYALLLFGGNLIPSKTGEGIEMLGGYLHFSASKTVLELIRKLRGELDK 1014
I+ T ++ LLLF + S G+ I ++ ++ S I LR ++
Sbjct: 1052 RAISAKGMTLVTPLQLLLFASKKVQSD-GQ-IVLVDDWIKLQISHEAAACITGLRAAMEA 1109
Query: 1015 LLNRKIEDPRV 1025
L+ + P +
Sbjct: 1110 LVVEVTKQPAI 1120
>sp|Q5R874|DHX9_PONAB ATP-dependent RNA helicase A OS=Pongo abelii GN=DHX9 PE=2 SV=1
Length = 1269
Score = 508 bits (1307), Expect = e-142, Method: Compositional matrix adjust.
Identities = 296/791 (37%), Positives = 450/791 (56%), Gaps = 31/791 (3%)
Query: 245 PQSDSAKERLNVILK-ERQEKLKSSDSGKAMLSFREKLPAFKMKAEFLKAVAENQVLVVS 303
P + + E++++ LK E +L+ +A+L RE LP K ++E L+A+++N V+++
Sbjct: 351 PLAFATPEQISMDLKNELMYQLEQDHDLQAILQERELLPVKKFESEILEAISQNSVVIIR 410
Query: 304 GETGCGKTTQLPQFILEEELSSLRGADCNIICTQPRRISAISVAARVSSERGENLGETVG 363
G TGCGKTTQ+PQFIL++ + + R A+CNI+ TQPRRISA+SVA RV+ ERGE G++ G
Sbjct: 411 GATGCGKTTQVPQFILDDFIQNDRAAECNIVVTQPRRISAVSVAERVAFERGEEPGKSCG 470
Query: 364 YQIRLESKRS-AQTRLLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFLLIILR 422
Y +R ES ++FCT GVLLR+L + + +SH++VDEIHER +N DFLL++LR
Sbjct: 471 YSVRFESILPRPHASIMFCTVGVLLRKL--EAGIRGISHVIVDEIHERDINTDFLLVVLR 528
Query: 423 DLLPRRPDLRLILMSATINADLFSKYFGNAPTVHIPGLTFPVTDLFLEDVLEKTRYKMNS 482
D++ P++R++LMSATI+ +F +YF N P + + G T+PV + FLED ++ T +
Sbjct: 529 DVVQAYPEVRIVLMSATIDTSMFCEYFFNCPIIEVYGRTYPVQEYFLEDCIQMTHFVPPP 588
Query: 483 KLDSFQGNSRRSRRQDSKKDHLTALFEDVDIDSNYKNYRASTRASLEAWSAEQIDLGLVE 542
K + D +L E Y TR S+ + ++ L+E
Sbjct: 589 KDKKKKDKDDDGGEDDDANCNLICGDE----------YGPETRLSMSQLNEKETPFELIE 638
Query: 543 STIEYICRHEGDGAILVFLTGWNDISKLLDQIKVNKFLGDPNKFLVLPLHGSMPTINQRE 602
+ ++YI GA+LVFL GWN I + +++N G +++ +LPLH +P QR+
Sbjct: 639 ALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHFGS-HRYQILPLHSQIPREEQRK 697
Query: 603 IFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKAS 662
+FD P K++L+TNIAE+SITI+DVVYV+D K K + A N + W SK +
Sbjct: 698 VFDPVPVGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTN 757
Query: 663 AHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQLPEILRTPLQELCLHIKSLQLGTVGSFL 722
QR+GRAGRV+PG C+ L R + + + PE+ RTPL E+ L IK L+LG +G FL
Sbjct: 758 LEQRKGRAGRVRPGFCFHLCSRARFERLETHMTPEMFRTPLHEIALSIKLLRLGGIGQFL 817
Query: 723 SKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGKMLLMGAIFQCL 782
+KA++PP AV A L+ + ALD + LTPLGR L LP++P GKM++MG IF
Sbjct: 818 AKAIEPPPLDAVIEAEHTLRELDALDANDELTPLGRILAKLPIEPRFGKMMIMGCIFYVG 877
Query: 783 NPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAKRNRRE 842
+ TIAAA PF +N K + R+FAG+ SDH+ALL F + DA+ E
Sbjct: 878 DAICTIAAATCFPEPF---INEGKRLGYIHRNFAGNRFSDHVALLSVFQAWDDARMGGEE 934
Query: 843 RD--FCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYSHD--LEMVCAI 898
+ FC L+ TL+M + + Q ++L + GF + + D L++V ++
Sbjct: 935 AEIRFCEHKRLNMATLRMTWEAKVQLKEILINSGFPEDCLLTQVFTNTGPDNNLDVVISL 994
Query: 899 LCAGLYPNVVQCKRKGKRAVFYTKEVGQVALHPSSVN----ANQNNFPLPYMVYSEMVKT 954
L G+YPNV C K KR + T E +H SSVN + +P P+ V+ E ++T
Sbjct: 995 LAFGVYPNV--CYHKEKRKIL-TTEGRNALIHKSSVNCPFSSQDMKYPSPFFVFGEKIRT 1051
Query: 955 NNINVYDSTNISEYALLLFGGNLIPSKTGEGIEMLGGYLHFSASKTVLELIRKLRGELDK 1014
I+ T ++ LLLF + S G+ I ++ ++ S I LR ++
Sbjct: 1052 RAISAKGMTLVTPLQLLLFASKKVQSD-GQ-IVLVDDWIKLQISHEAAACITGLRAAMEA 1109
Query: 1015 LLNRKIEDPRV 1025
L+ + P +
Sbjct: 1110 LVVEVTKQPAI 1120
>sp|Q28141|DHX9_BOVIN ATP-dependent RNA helicase A OS=Bos taurus GN=DHX9 PE=2 SV=1
Length = 1287
Score = 506 bits (1303), Expect = e-142, Method: Compositional matrix adjust.
Identities = 296/791 (37%), Positives = 451/791 (57%), Gaps = 31/791 (3%)
Query: 245 PQSDSAKERLNVILK-ERQEKLKSSDSGKAMLSFREKLPAFKMKAEFLKAVAENQVLVVS 303
P + + E++++ LK E +L+ +A+L RE LP K ++E L+A+++N V+++
Sbjct: 348 PLAYATPEQISMDLKNELMYQLEQDRDLQAVLQERELLPVKKFESEILEAISQNPVVIIR 407
Query: 304 GETGCGKTTQLPQFILEEELSSLRGADCNIICTQPRRISAISVAARVSSERGENLGETVG 363
G TGCGKTTQ+PQFIL++ + + R A+CNI+ TQPRRISA+SVA RV+ ERGE G++ G
Sbjct: 408 GATGCGKTTQVPQFILDDCIQNDRAAECNIVVTQPRRISAVSVAERVAYERGEEPGKSCG 467
Query: 364 YQIRLESKRS-AQTRLLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFLLIILR 422
Y +R ES ++FCT GVLLR+L + + +SH++VDEIHER +N DFLL++LR
Sbjct: 468 YSVRFESILPRPHASIMFCTVGVLLRKL--EAGIRGISHVIVDEIHERDINTDFLLVVLR 525
Query: 423 DLLPRRPDLRLILMSATINADLFSKYFGNAPTVHIPGLTFPVTDLFLEDVLEKTRYKMNS 482
D++ P++R++LMSATI+ +F +YF N P + + G TFPV + FLED ++ T +
Sbjct: 526 DVVQAYPEVRIVLMSATIDTSMFCEYFFNCPIIEVYGRTFPVQEYFLEDCIQMTHFVPPP 585
Query: 483 KLDSFQGNSRRSRRQDSKKDHLTALFEDVDIDSNYKNYRASTRASLEAWSAEQIDLGLVE 542
K + D +L E Y A TR S+ + ++ L+E
Sbjct: 586 KDKKKKDKDDDGGEDDDANCNLICGDE----------YGAETRISMAQLNEKETPFELIE 635
Query: 543 STIEYICRHEGDGAILVFLTGWNDISKLLDQIKVNKFLGDPNKFLVLPLHGSMPTINQRE 602
+ + YI GA+LVFL GWN I + +++N G +++ +LPLH +P QR+
Sbjct: 636 ALLLYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHFGS-HRYQILPLHSQIPREEQRK 694
Query: 603 IFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKAS 662
+FD P KI+L+TNIAE+SITI+DVVYV+D K K + A N + W SK +
Sbjct: 695 VFDPVPSGVTKIILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTN 754
Query: 663 AHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQLPEILRTPLQELCLHIKSLQLGTVGSFL 722
QR+GRAGRV+PG C+ L R + + + PE+ RTPL E+ L IK L+LG +G FL
Sbjct: 755 LEQRKGRAGRVRPGFCFHLCSRARFERLETHMTPEMFRTPLHEIALSIKLLRLGGIGQFL 814
Query: 723 SKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGKMLLMGAIFQCL 782
+KA++PP AV A L+ + ALD + LTPLGR L LP++P GKM++MG IF
Sbjct: 815 AKAIEPPPLDAVIEAEHTLRELDALDANDELTPLGRILAKLPIEPRFGKMMIMGCIFYVG 874
Query: 783 NPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAKRNRRE 842
+ TI+AA PF ++ K + R+FAG+ SDH+ALL F + DA+ E
Sbjct: 875 DAICTISAATCFPEPF---ISEGKRLGYIHRNFAGNRFSDHVALLSVFQAWDDARMGGEE 931
Query: 843 RD--FCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYSHD--LEMVCAI 898
+ FC L+ TL+M + + Q ++L + GF ++ + D L++V ++
Sbjct: 932 AEIRFCEHKRLNMATLRMTWEAKVQLKEILINSGFPEECLLTQVFTNTGPDNNLDVVISL 991
Query: 899 LCAGLYPNVVQCKRKGKRAVFYTKEVGQVALHPSSVN----ANQNNFPLPYMVYSEMVKT 954
L G+YPNV C K KR + T E +H SSVN + +P P+ V+ E ++T
Sbjct: 992 LAFGVYPNV--CYHKEKRKIL-TTEGRNALIHKSSVNCPFSSQDMKYPSPFFVFGEKIRT 1048
Query: 955 NNINVYDSTNISEYALLLFGGNLIPSKTGEGIEMLGGYLHFSASKTVLELIRKLRGELDK 1014
I+ T ++ LLLF + S G+ + ++ ++ S I LR ++
Sbjct: 1049 RAISAKGMTLVTPLQLLLFASKKVQSD-GQLV-LVDDWIRLQISHEAAACITALRAAMEA 1106
Query: 1015 LLNRKIEDPRV 1025
L+ + P +
Sbjct: 1107 LVVEVTKQPGI 1117
>sp|P24785|MLE_DROME Dosage compensation regulator OS=Drosophila melanogaster GN=mle PE=2
SV=2
Length = 1293
Score = 502 bits (1292), Expect = e-141, Method: Compositional matrix adjust.
Identities = 304/785 (38%), Positives = 452/785 (57%), Gaps = 32/785 (4%)
Query: 262 QEKLKSSDSGKAMLSFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEE 321
+++ ++ + + L FREKLP M++E L A+ +N V+++ G TGCGKTTQ+ Q+IL++
Sbjct: 365 RDRRQNDNEYRQFLEFREKLPIAAMRSEILTAINDNPVVIIRGNTGCGKTTQIAQYILDD 424
Query: 322 ELSSLRGADCNIICTQPRRISAISVAARVSSERGENLGETVGYQIRLESKR-SAQTRLLF 380
+ S +G NI TQPRRISAISVA RV+ ER E LG+TVGY +R ES +LF
Sbjct: 425 YICSGQGGYANIYVTQPRRISAISVAERVARERCEQLGDTVGYSVRFESVFPRPYGAILF 484
Query: 381 CTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFLLIILRDLLPRRPDLRLILMSATI 440
CT GVLLR+L + L VSH++VDEIHER +N DFLL+ILRD++ PDL +ILMSATI
Sbjct: 485 CTVGVLLRKL--EAGLRGVSHIIVDEIHERDVNSDFLLVILRDMVDTYPDLHVILMSATI 542
Query: 441 NADLFSKYFGNAPTVHIPGLTFPVTDLFLEDVLEKTRYKMNSKLDSFQGNSRRSRRQDSK 500
+ FSKYFG P + +PG FPV FLED+++ T + +++ SRR R++
Sbjct: 543 DTTKFSKYFGICPVLEVPGRAFPVQQFFLEDIIQMTDFVPSAE-------SRRKRKEVED 595
Query: 501 KDHLTALFEDVD-IDSNYKN-----YRASTRASLEAWSAEQIDLGLVESTIEYICRHEGD 554
++ L L ED D + NY Y TR ++ S + L+E+ + +I
Sbjct: 596 EEQL--LSEDKDEAEINYNKVCEDKYSQKTRNAMAMLSESDVSFELLEALLMHIKSKNIP 653
Query: 555 GAILVFLTGWNDISKLLDQIKVNKFLGDPNKFLVLPLHGSMPTINQREIFDRPPPNKRKI 614
GAILVFL GWN I L+ ++ GD +++ +LP H +P QR++F+ P KI
Sbjct: 654 GAILVFLPGWNLIFALMKFLQNTNIFGDTSQYQILPCHSQIPRDEQRKVFEPVPEGVTKI 713
Query: 615 VLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQ 674
+L+TNIAE+SITIDD+V+V+D KA+ + + N L W SK + QR+GRAGRV+
Sbjct: 714 ILSTNIAETSITIDDIVFVIDICKARMKLFTSHNNLTSYATVWASKTNLEQRKGRAGRVR 773
Query: 675 PGVCYKLYPRIIHDAMLPYQLPEILRTPLQELCLHIKSLQLGTVGSFLSKALQPPDPLAV 734
PG C+ L R A+ PE+ RTPL E+ L IK L+LG++ FLSKAL+PP AV
Sbjct: 774 PGFCFTLCSRARFQALEDNLTPEMFRTPLHEMALTIKLLRLGSIHHFLSKALEPPPVDAV 833
Query: 735 QNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGKMLLMGAIFQCLNPALTIAAALAH 794
A LL+ + LD + LTPLGR L LP++P +GKM+++GA+F C + + I A+ +
Sbjct: 834 IEAEVLLREMRCLDANDELTPLGRLLARLPIEPRLGKMMVLGAVFGCAD-LMAIMASYSS 892
Query: 795 RNPFVLPVNM-QKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAKR--NRRERDFCWENFL 851
V +++ Q+ + +++ +G CSDH+A++ A ++ K+ E FC L
Sbjct: 893 TFSEVFSLDIGQRRLANHQKALSGTKCSDHVAMIVASQMWRREKQRGEHMEARFCDWKGL 952
Query: 852 SPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYN-RYSHD---LEMVCAILCAGLYPNV 907
T+ ++ D + Q LDLL GF ++ + R D L++ A+LC GLYPN+
Sbjct: 953 QMSTMNVIWDAKQQLLDLLQQAGFPEECMISHEVDERIDGDDPVLDVSLALLCLGLYPNI 1012
Query: 908 VQCKRKGKRAVFYTKEVGQVALHPSSVNANQ--NNFPLPYMVYSEMVKTNNINVYDSTNI 965
C K KR V T E LH +SVN + FP P+ V+ E ++T ++ + +
Sbjct: 1013 --CVHKEKRKVL-TTESKAALLHKTSVNCSNLAVTFPYPFFVFGEKIRTRAVSCKQLSMV 1069
Query: 966 SEYALLLFGGNLIPSKTGEGIEMLGGYLHFSASKTVLELIRKLRGELDKLLNRKIEDPRV 1025
S ++LFG I I + +L+F + I L+ L+ L+ ++P
Sbjct: 1070 SPLQVILFGSRKI-DLAANNIVRVDNWLNFDIEPELAAKIGALKPALEDLITVACDNPSD 1128
Query: 1026 DLSVE 1030
L +E
Sbjct: 1129 ILRLE 1133
>sp|Q5ZI74|DHX30_CHICK Putative ATP-dependent RNA helicase DHX30 OS=Gallus gallus GN=DHX30
PE=2 SV=1
Length = 1231
Score = 501 bits (1291), Expect = e-140, Method: Compositional matrix adjust.
Identities = 292/712 (41%), Positives = 415/712 (58%), Gaps = 63/712 (8%)
Query: 281 LPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQPRR 340
LP K L A+ +N V+V++G+TGCGKTT++PQ +LE + RGA CN++ TQPRR
Sbjct: 478 LPVDPHKDTILSAIEQNPVVVIAGDTGCGKTTRIPQLLLEHYILEGRGARCNVVITQPRR 537
Query: 341 ISAISVAARVSSERGENLGETVGYQIRLESKRSAQT-RLLFCTTGVLLRQLVEDPDLSCV 399
ISAISVA RV+ E G N+ + VGYQ+RLESK A+ LLFCT G+LLR+L +P L V
Sbjct: 538 ISAISVAQRVAQELGPNMRKNVGYQVRLESKPPARGGALLFCTVGILLRKLQGNPSLEGV 597
Query: 400 SHLLVDEIHERGMNEDFLLIILRDLLPRRPDLRLILMSATINADLFSKYFGNAPTVHIPG 459
SH++VDE+HER +N DFLLI+L+ + PDLRL+LMSAT + FS YFG P V +PG
Sbjct: 598 SHVVVDEVHERDVNTDFLLILLKGIQKLNPDLRLVLMSATGDNQRFSHYFGGCPVVKVPG 657
Query: 460 LTFPVTDLFLEDVLEKTRYKMNSKLDSFQGNSRRSRRQDSKKDHLTALFEDVDIDSNYKN 519
+PV + +LE++L K G R + + D L
Sbjct: 658 FMYPVKEYYLEEILAKL------------GRHRHRHYEIKQSDDECVL------------ 693
Query: 520 YRASTRASLEAWSAEQIDLGLVESTIEYICRHEGDGAILVFLTGWNDISKLLDQIKVNKF 579
DL L+ + I H G IL FL GW +I + Q ++ +
Sbjct: 694 -----------------DLDLITDLVLQIDAHGEPGGILCFLPGWQEIKGV--QQRLLEM 734
Query: 580 LGDPN-KFLVLPLHGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGK 638
LG N ++LVLP+H ++P ++Q+ IF RPPP RKIVLATNIAE+SITI+D+V+VVD G
Sbjct: 735 LGSQNSRYLVLPVHSNIPMMDQQNIFQRPPPGVRKIVLATNIAETSITINDIVHVVDSGT 794
Query: 639 AKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQLPEI 698
KE YD K++CL W+SK++ QRRGRAGR Q G Y L+PR D M YQ+PEI
Sbjct: 795 HKEERYDLKTKVSCLETVWVSKSNVVQRRGRAGRCQSGFAYHLFPRSRLDKMPTYQVPEI 854
Query: 699 LRTPLQELCLHIK-SLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLG 757
LRTPL+ L + K + T FLSKAL PD AV A+ LL+ IG LD E LT LG
Sbjct: 855 LRTPLENLVVQAKIHMPEKTAVEFLSKALDSPDIKAVDEAVILLQEIGVLDQREALTTLG 914
Query: 758 RHLCTLPVDPNIGKMLLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAG 817
+ L + DP + K +++ +I++CL+P L I + L R+PF + + EVD+AK +
Sbjct: 915 KRLAQISTDPRLAKAIVLASIYRCLHPLLVIVSCLT-RDPFSSSLQNRAEVDKAKAVLSR 973
Query: 818 DSCSDHIALLKAFDGYKDA--KRNRRERD-FCWENFLSPITLQMMEDMRSQFLDLLSDIG 874
+S SDH+A ++A G+++ +R+ R RD + + +L +L+ + + QF + L +
Sbjct: 974 ESGSDHLAFVRAVAGWEEVLRRRDSRARDNYLQDYYLYGPSLRFINGLVKQFSENLYEAF 1033
Query: 875 FV----DKSKGPSAYNRYSHDLEMVCAILCAGLYPNVVQCK-----RKGK---RAVFYTK 922
V D + S N+YS + E+V +L AGLYPN++Q + R+GK + Y
Sbjct: 1034 LVSSPSDCTMPSSVCNQYSEEEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSYAYRT 1093
Query: 923 EVGQVALHPSSVNANQNNFPLPYMVYSEMVKTN-NINVYDSTNISEYALLLF 973
+ G V LH S++N + ++ Y VK+N + V DS+ + A+LL
Sbjct: 1094 KAGTVLLHKSTINREASKLYSRWLTYFMAVKSNGGVFVRDSSQVHPLAVLLM 1145
>sp|Q5BJS0|DHX30_RAT Putative ATP-dependent RNA helicase DHX30 OS=Rattus norvegicus
GN=Dhx30 PE=1 SV=1
Length = 1194
Score = 493 bits (1268), Expect = e-138, Method: Compositional matrix adjust.
Identities = 288/713 (40%), Positives = 422/713 (59%), Gaps = 62/713 (8%)
Query: 280 KLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQPR 339
+LP + L A+ ++ V+V+SG+TGCGKTT++PQ +LE ++ RGA CN+I TQPR
Sbjct: 433 QLPVDPHRDTILSAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTEGRGARCNVIITQPR 492
Query: 340 RISAISVAARVSSERGENLGETVGYQIRLESKRSAQT-RLLFCTTGVLLRQLVEDPDLSC 398
RISA+SVA RVS E G +L VG+Q+RLESK A+ LLFCT G+LLR+L +P L
Sbjct: 493 RISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSNPSLEG 552
Query: 399 VSHLLVDEIHERGMNEDFLLIILRDLLPRRPDLRLILMSATINADLFSKYFGNAPTVHIP 458
VSH++VDE+HER +N DFLLI+L+ L P LRL+LMSAT + + FS+YFG P + +P
Sbjct: 553 VSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVP 612
Query: 459 GLTFPVTDLFLEDVLEKTRYKMNSKLDSFQGNSRRSRRQDSKKDHLTALFEDVDIDSNYK 518
G +PV + +LED+L +KL Q R ++
Sbjct: 613 GFMYPVKEHYLEDIL--------AKLGKHQYPHR------------------------HR 640
Query: 519 NYRASTRASLEAWSAEQIDLGLVESTIEYICRHEGDGAILVFLTGWNDISKLLDQIKVNK 578
++ + +L DL LV + +I G IL FL GW +I + Q ++ +
Sbjct: 641 HHESEDECAL--------DLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGV--QQRLQE 690
Query: 579 FLG-DPNKFLVLPLHGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCG 637
LG +K+L+LP+H ++P ++Q+ IF +PP RKIVLATNIAE+SIT++D+V+VVD G
Sbjct: 691 ALGMHESKYLILPVHSNIPMMDQKAIFQQPPLGVRKIVLATNIAETSITVNDIVHVVDSG 750
Query: 638 KAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQLPE 697
KE YD K++CL W+S+A+ QRRGRAGR Q G Y L+PR + M+P+Q+PE
Sbjct: 751 LHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPE 810
Query: 698 ILRTPLQELCLHIK-SLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPL 756
ILRTPL+ L L K + T FLSKA+ P+ AV A+ LL+ IG LD E LT L
Sbjct: 811 ILRTPLENLVLQAKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTL 870
Query: 757 GRHLCTLPVDPNIGKMLLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFA 816
G+ L + DP + K +++ AIF+CL+P L + + L R+PF + + EVD+ K +
Sbjct: 871 GQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT-RDPFSSSLQNRAEVDKVKALLS 929
Query: 817 GDSCSDHIALLKAFDGYKDAKR--NRRERD-FCWENFLSPITLQMMEDMRSQFLDLLSDI 873
DS SDH+A ++A G+++ R +R R+ + EN L +L+ + + QF + + +
Sbjct: 930 HDSGSDHLAFVRAVAGWEEVLRWQDRTSRENYLEENLLYAPSLRFIHGLIKQFSENIYEA 989
Query: 874 GFVDKSKG---PSAY-NRYSHDLEMVCAILCAGLYPNVVQCK-----RKGK---RAVFYT 921
V K PSA N YS + E+V +L AGLYPN++Q + R+GK +V Y
Sbjct: 990 FLVGKPSDCTLPSAQCNEYSEEEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSVTYR 1049
Query: 922 KEVGQVALHPSSVNANQNNFPLPYMVYSEMVKTN-NINVYDSTNISEYALLLF 973
+ G + LH S++N ++ Y VK+N ++ V DS+ + A+LL
Sbjct: 1050 TKSGNILLHKSTINREATRLRSRWLTYFMAVKSNGSVFVRDSSQVHPLAVLLL 1102
>sp|Q99PU8|DHX30_MOUSE Putative ATP-dependent RNA helicase DHX30 OS=Mus musculus GN=Dhx30
PE=2 SV=1
Length = 1217
Score = 493 bits (1268), Expect = e-138, Method: Compositional matrix adjust.
Identities = 297/764 (38%), Positives = 440/764 (57%), Gaps = 66/764 (8%)
Query: 280 KLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQPR 339
+LP + L A+ ++ V+V+SG+TGCGKTT++PQ +LE ++ RGA CN+I TQPR
Sbjct: 456 QLPVDPHRDTILSAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTEGRGARCNVIITQPR 515
Query: 340 RISAISVAARVSSERGENLGETVGYQIRLESKRSAQT-RLLFCTTGVLLRQLVEDPDLSC 398
RISA+SVA RVS E G +L VG+Q+RLESK A+ LLFCT G+LLR+L +P L
Sbjct: 516 RISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSNPSLEG 575
Query: 399 VSHLLVDEIHERGMNEDFLLIILRDLLPRRPDLRLILMSATINADLFSKYFGNAPTVHIP 458
VSH++VDE+HER +N DFLLI+L+ L P LRL+LMSAT + + FS+YFG P + +P
Sbjct: 576 VSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVP 635
Query: 459 GLTFPVTDLFLEDVLEKTRYKMNSKLDSFQGNSRRSRRQDSKKDHLTALFEDVDIDSNYK 518
G +PV + +LED+L +KL Q R ++
Sbjct: 636 GFMYPVKEHYLEDIL--------AKLGKHQYPHR------------------------HR 663
Query: 519 NYRASTRASLEAWSAEQIDLGLVESTIEYICRHEGDGAILVFLTGWNDISKLLDQIKVNK 578
++ + +L DL LV + +I G IL FL GW +I + Q ++ +
Sbjct: 664 HHESEDECAL--------DLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGV--QQRLQE 713
Query: 579 FLG-DPNKFLVLPLHGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCG 637
LG +K+L+LP+H ++P ++Q+ IF +PP RKIVLATNIAE+SIT++D+V+VVD G
Sbjct: 714 ALGMHESKYLILPVHSNIPMMDQKAIFQQPPLGVRKIVLATNIAETSITVNDIVHVVDSG 773
Query: 638 KAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQLPE 697
KE YD K++CL W+S+A+ QRRGRAGR Q G Y L+PR + M+P+Q+PE
Sbjct: 774 LHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPE 833
Query: 698 ILRTPLQELCLHIK-SLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPL 756
ILRTPL+ L L K + T FLSKA+ P+ AV A+ LL+ IG LD E LT L
Sbjct: 834 ILRTPLENLVLQAKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTL 893
Query: 757 GRHLCTLPVDPNIGKMLLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFA 816
G+ L + DP + K +++ AIF+CL+P L + + L R+PF + + EVD+ K +
Sbjct: 894 GQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT-RDPFSSSLQNRAEVDKVKALLS 952
Query: 817 GDSCSDHIALLKAFDGYKDAKR--NRRERD-FCWENFLSPITLQMMEDMRSQFLDLLSDI 873
DS SDH+A ++A G+++ R +R R+ + EN L +L+ + + QF + + +
Sbjct: 953 HDSGSDHLAFVRAVAGWEEVLRWQDRTSRENYLEENLLYAPSLRFIHGLIKQFSENIYEA 1012
Query: 874 GFVDKSKG---PSAY-NRYSHDLEMVCAILCAGLYPNVVQCK-----RKGK---RAVFYT 921
V K PSA N YS + E+V +L AGLYPN++Q + R+GK +V Y
Sbjct: 1013 FLVGKPSDCTLPSAQCNEYSEEEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSVTYR 1072
Query: 922 KEVGQVALHPSSVNANQNNFPLPYMVYSEMVKTN-NINVYDSTNISEYA-LLLFGGNLIP 979
+ G + LH S++N ++ Y VK+N ++ V DS+ + A LLL G++
Sbjct: 1073 TKSGNILLHKSTINREATRLRSRWLTYFMAVKSNGSVFVRDSSQVHPLAVLLLTDGDVHI 1132
Query: 980 SKTGEGIEML---GGYLHFSASKTVLELIRKLRGELDKLLNRKI 1020
G + L + L+R+ R L +++ R +
Sbjct: 1133 RDDGRRATISLSDSDLLRLEGDSRTVRLLREFRRALGRMVERSL 1176
>sp|Q7L2E3|DHX30_HUMAN Putative ATP-dependent RNA helicase DHX30 OS=Homo sapiens GN=DHX30
PE=1 SV=1
Length = 1194
Score = 491 bits (1263), Expect = e-137, Method: Compositional matrix adjust.
Identities = 294/764 (38%), Positives = 440/764 (57%), Gaps = 66/764 (8%)
Query: 280 KLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQPR 339
+LP + L A+ ++ V+V+SG+TGCGKTT++PQ +LE ++ RGA CN+I TQPR
Sbjct: 433 QLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTEGRGARCNVIITQPR 492
Query: 340 RISAISVAARVSSERGENLGETVGYQIRLESKRSAQT-RLLFCTTGVLLRQLVEDPDLSC 398
RISA+SVA RVS E G +L VG+Q+RLESK ++ LLFCT G+LLR+L +P L
Sbjct: 493 RISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPSRGGALLFCTVGILLRKLQSNPSLEG 552
Query: 399 VSHLLVDEIHERGMNEDFLLIILRDLLPRRPDLRLILMSATINADLFSKYFGNAPTVHIP 458
VSH++VDE+HER +N DFLLI+L+ L P LRL+LMSAT + + FS+YFG P + +P
Sbjct: 553 VSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVP 612
Query: 459 GLTFPVTDLFLEDVLEKTRYKMNSKLDSFQGNSRRSRRQDSKKDHLTALFEDVDIDSNYK 518
G +PV + +LED+L +KL Q R ++
Sbjct: 613 GFMYPVKEHYLEDIL--------AKLGKHQYLHR------------------------HR 640
Query: 519 NYRASTRASLEAWSAEQIDLGLVESTIEYICRHEGDGAILVFLTGWNDISKLLDQIKVNK 578
++ + +L DL LV + +I G IL FL GW +I + Q ++ +
Sbjct: 641 HHESEDECAL--------DLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGV--QQRLQE 690
Query: 579 FLG-DPNKFLVLPLHGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCG 637
LG +K+L+LP+H ++P ++Q+ IF +PP RKIVLATNIAE+SITI+D+V+VVD G
Sbjct: 691 ALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLATNIAETSITINDIVHVVDSG 750
Query: 638 KAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQLPE 697
KE YD K++CL W+S+A+ QRRGRAGR Q G Y L+PR + M+P+Q+PE
Sbjct: 751 LHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPE 810
Query: 698 ILRTPLQELCLHIK-SLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPL 756
ILRTPL+ L L K + T FLSKA+ P+ AV A+ LL+ IG LD E LT L
Sbjct: 811 ILRTPLENLVLQAKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTL 870
Query: 757 GRHLCTLPVDPNIGKMLLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFA 816
G+ L + DP + K +++ AIF+CL+P L + + L R+PF + + EVD+ K +
Sbjct: 871 GQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT-RDPFSSSLQNRAEVDKVKALLS 929
Query: 817 GDSCSDHIALLKAFDGYKDAKR--NRRERD-FCWENFLSPITLQMMEDMRSQFLDLLSDI 873
DS SDH+A ++A G+++ R +R R+ + EN L +L+ + + QF + + +
Sbjct: 930 HDSGSDHLAFVRAVAGWEEVLRWQDRSSRENYLEENLLYAPSLRFIHGLIKQFSENIYEA 989
Query: 874 GFV----DKSKGPSAYNRYSHDLEMVCAILCAGLYPNVVQCK-----RKGK---RAVFYT 921
V D + + N YS + E+V +L AGLYPN++Q + R+GK +V Y
Sbjct: 990 FLVGKPSDCTLASAQCNEYSEEEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSVTYR 1049
Query: 922 KEVGQVALHPSSVNANQNNFPLPYMVYSEMVKTN-NINVYDSTNISEYA-LLLFGGNLIP 979
+ G + LH S++N ++ Y VK+N ++ V DS+ + A LLL G++
Sbjct: 1050 TKSGNILLHKSTINREATRLRSRWLTYFMAVKSNGSVFVRDSSQVHPLAVLLLTDGDVHI 1109
Query: 980 SKTGEGIEML---GGYLHFSASKTVLELIRKLRGELDKLLNRKI 1020
G + L + L+++LR L +++ R +
Sbjct: 1110 RDDGRRATISLSDSDLLRLEGDSRTVRLLKELRRALGRMVERSL 1153
>sp|Q5R607|DHX30_PONAB Putative ATP-dependent RNA helicase DHX30 OS=Pongo abelii GN=DHX30
PE=2 SV=1
Length = 1194
Score = 488 bits (1256), Expect = e-136, Method: Compositional matrix adjust.
Identities = 293/764 (38%), Positives = 439/764 (57%), Gaps = 66/764 (8%)
Query: 280 KLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQPR 339
+LP + L A+ ++ V+V+SG+TGCGKTT++PQ +LE ++ RGA CN+I TQPR
Sbjct: 433 QLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTEGRGARCNVIITQPR 492
Query: 340 RISAISVAARVSSERGENLGETVGYQIRLESKRSAQT-RLLFCTTGVLLRQLVEDPDLSC 398
RISA+SVA RVS E G +L VG+Q+RLESK A+ LLFCT G+LLR+L +P L
Sbjct: 493 RISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSNPSLEG 552
Query: 399 VSHLLVDEIHERGMNEDFLLIILRDLLPRRPDLRLILMSATINADLFSKYFGNAPTVHIP 458
VSH++VDE+HER +N DFLLI+L+ L P LRL+LMSAT + + FS+YFG P + +P
Sbjct: 553 VSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVP 612
Query: 459 GLTFPVTDLFLEDVLEKTRYKMNSKLDSFQGNSRRSRRQDSKKDHLTALFEDVDIDSNYK 518
G +PV + +LED+L +KL Q R ++
Sbjct: 613 GFMYPVKEHYLEDIL--------AKLGKHQYLHR------------------------HR 640
Query: 519 NYRASTRASLEAWSAEQIDLGLVESTIEYICRHEGDGAILVFLTGWNDISKLLDQIKVNK 578
++ + +L DL LV + +I G IL FL GW +I + Q ++ +
Sbjct: 641 HHESEDECAL--------DLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGV--QQRLQE 690
Query: 579 FLG-DPNKFLVLPLHGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCG 637
LG +K+L+LP+H ++P ++Q+ IF +PP RKIVLATNIAE+S TI+D+V+VVD G
Sbjct: 691 ALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLATNIAETSTTINDIVHVVDSG 750
Query: 638 KAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQLPE 697
KE YD K++CL W+S+A+ QRRGRAGR Q G Y L+PR + M+P+Q+PE
Sbjct: 751 LHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPE 810
Query: 698 ILRTPLQELCLHIK-SLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPL 756
ILRTPL+ L L K + T FLSKA+ P+ AV A+ LL+ IG LD E LT L
Sbjct: 811 ILRTPLENLVLQAKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTL 870
Query: 757 GRHLCTLPVDPNIGKMLLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFA 816
G+ L + +P + K +++ AIF+CL+P L + + L R+PF + + EVD+ K +
Sbjct: 871 GQRLAHISTEPRLAKAIVLAAIFRCLHPLLVVVSCLT-RDPFSSSLQNRAEVDKVKALLS 929
Query: 817 GDSCSDHIALLKAFDGYKDAKR--NRRERD-FCWENFLSPITLQMMEDMRSQFLDLLSDI 873
DS SDH+A ++A G+++ R +R R+ + EN L +L+ + + QF + + +
Sbjct: 930 HDSGSDHLAFVRAVAGWEEVLRWQDRSSRENYLEENLLYAPSLRFIHGLIKQFSENIYEA 989
Query: 874 GFV----DKSKGPSAYNRYSHDLEMVCAILCAGLYPNVVQCK-----RKGK---RAVFYT 921
V D + + N YS + E+V +L AGLYPN++Q + R+GK +V Y
Sbjct: 990 FLVGKPSDCTLASAQCNEYSEEEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSVTYR 1049
Query: 922 KEVGQVALHPSSVNANQNNFPLPYMVYSEMVKTN-NINVYDSTNISEYA-LLLFGGNLIP 979
+ G + LH S++N ++ Y VK+N ++ V DS+ + A LLL G++
Sbjct: 1050 TKSGNILLHKSTINREATRLRSRWLTYFMAVKSNGSVFVRDSSQVHPLAVLLLTDGDVHI 1109
Query: 980 SKTGEGIEML---GGYLHFSASKTVLELIRKLRGELDKLLNRKI 1020
G + L + L+++LR L +++ R +
Sbjct: 1110 RDDGRRATISLSDSDLLRLEGDSRTVRLLKELRRALGRMVERSL 1153
>sp|Q2NKY8|DHX30_BOVIN Putative ATP-dependent RNA helicase DHX30 OS=Bos taurus GN=DHX30 PE=2
SV=1
Length = 1220
Score = 488 bits (1255), Expect = e-136, Method: Compositional matrix adjust.
Identities = 286/713 (40%), Positives = 417/713 (58%), Gaps = 62/713 (8%)
Query: 280 KLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQPR 339
+LP + L A+ ++ V+V++G+TGCGKTT++PQ +LE ++ RGA CN+I TQPR
Sbjct: 459 QLPVDPHRDTILNAIEQHPVVVIAGDTGCGKTTRIPQLLLERYVTEGRGARCNVIITQPR 518
Query: 340 RISAISVAARVSSERGENLGETVGYQIRLESKRSAQT-RLLFCTTGVLLRQLVEDPDLSC 398
RISA+SVA RVS E G L VG+Q+RLESK A+ LLFCT G+LLR+L +P L
Sbjct: 519 RISAVSVAQRVSHELGPTLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSNPSLEG 578
Query: 399 VSHLLVDEIHERGMNEDFLLIILRDLLPRRPDLRLILMSATINADLFSKYFGNAPTVHIP 458
VSH++VDE HER +N DFLLI+L+ L P LRL+LMSAT + + FS+YFG P + +P
Sbjct: 579 VSHVVVDEEHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVP 638
Query: 459 GLTFPVTDLFLEDVLEKTRYKMNSKLDSFQGNSRRSRRQDSKKDHLTALFEDVDIDSNYK 518
G +PV + +LED+L +KL Q R R +S+ +
Sbjct: 639 GFMYPVKEHYLEDIL--------AKLGKHQ-YPHRHRHHESEDEC--------------- 674
Query: 519 NYRASTRASLEAWSAEQIDLGLVESTIEYICRHEGDGAILVFLTGWNDISKLLDQIKVNK 578
+DL LV + +I G IL FL GW +I + Q ++ +
Sbjct: 675 ----------------ALDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGV--QQRLQE 716
Query: 579 FLG-DPNKFLVLPLHGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCG 637
LG +K+L+LP+H ++P ++Q+ IF +PP RKIVLATNIAE+SITI+D+V+VVD G
Sbjct: 717 ALGMHESKYLILPVHSNIPMMDQKAIFQQPPIGVRKIVLATNIAETSITINDIVHVVDSG 776
Query: 638 KAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQLPE 697
KE YD K++CL W+S+A+ QRRGRAGR Q G Y L+PR + M P+Q+PE
Sbjct: 777 LHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMAPFQVPE 836
Query: 698 ILRTPLQELCLHIK-SLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPL 756
ILRTPL+ L L K + T FLSKA+ P+ AV A+ LL+ IG LD E LT L
Sbjct: 837 ILRTPLENLVLQAKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTL 896
Query: 757 GRHLCTLPVDPNIGKMLLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFA 816
G+ L + DP + K +++ AIF+CL+P L + + L R+PF + + EVD+ K +
Sbjct: 897 GQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT-RDPFSSSLQNRAEVDKVKALLS 955
Query: 817 GDSCSDHIALLKAFDGYKDAKR--NRRERD-FCWENFLSPITLQMMEDMRSQFLDLLSDI 873
DS SDH+A ++A G+++ R +R R+ + EN L +L+ + + QF + + +
Sbjct: 956 HDSGSDHLAFVRAVSGWEEVLRWQDRSSRENYLEENLLYAPSLRFIHGLIKQFSENIYEA 1015
Query: 874 GFV----DKSKGPSAYNRYSHDLEMVCAILCAGLYPNVVQCK-----RKGK---RAVFYT 921
V D + + N YS + E+V +L AGLYPN++Q + R+GK +V Y
Sbjct: 1016 FLVGKPSDCTLASAQCNEYSEEEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSVTYR 1075
Query: 922 KEVGQVALHPSSVNANQNNFPLPYMVYSEMVKTN-NINVYDSTNISEYALLLF 973
+ G + LH S++N ++ Y VK+N ++ V DS+ + A+LL
Sbjct: 1076 TKSGNILLHKSTINREATRLRSRWLTYFMAVKSNGSVFVRDSSQVHPLAVLLL 1128
>sp|O70133|DHX9_MOUSE ATP-dependent RNA helicase A OS=Mus musculus GN=Dhx9 PE=1 SV=2
Length = 1380
Score = 483 bits (1243), Expect = e-135, Method: Compositional matrix adjust.
Identities = 283/746 (37%), Positives = 435/746 (58%), Gaps = 29/746 (3%)
Query: 245 PQSDSAKERLNVILK-ERQEKLKSSDSGKAMLSFREKLPAFKMKAEFLKAVAENQVLVVS 303
P + ++ E++++ LK E +++ + +++L RE LP K +AE L+A++ N V+++
Sbjct: 353 PLAYASTEQISMDLKNELTYQMEQDHNLQSVLQERELLPVKKFEAEILEAISSNSVVIIR 412
Query: 304 GETGCGKTTQLPQFILEEELSSLRGADCNIICTQPRRISAISVAARVSSERGENLGETVG 363
G TGCGKTTQ+PQ+IL++ + + R A+CNI+ TQPRRISA++VA RV+ ERGE G++ G
Sbjct: 413 GATGCGKTTQVPQYILDDFIQNDRAAECNIVVTQPRRISAVAVAERVAYERGEEPGKSCG 472
Query: 364 YQIRLESKRS-AQTRLLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFLLIILR 422
Y +R ES ++FCT GVLLR+L + + +SH++VDEIHER +N DFLL++LR
Sbjct: 473 YSVRFESILPRPHASIMFCTVGVLLRKL--EAGIRGISHVIVDEIHERDINTDFLLVVLR 530
Query: 423 DLLPRRPDLRLILMSATINADLFSKYFGNAPTVHIPGLTFPVTDLFLEDVLEKTRYKMNS 482
D++ P++R++LMSATI+ +F +YF N P + + G TFPV + FLED ++ T++
Sbjct: 531 DVVLAYPEVRIVLMSATIDTTMFCEYFFNCPIIEVYGRTFPVQEYFLEDCIQMTQFIPPP 590
Query: 483 KLDSFQGNSRRSRRQDSKKDHLTALFEDVDIDSNYKNYRASTRASLEAWSAEQIDLGLVE 542
K + D +L E Y T+ S+ + ++ L+E
Sbjct: 591 KDKKKKDKEDDGGEDDDANCNLICGDE----------YGPETKLSMSQLNEKETPFELIE 640
Query: 543 STIEYICRHEGDGAILVFLTGWNDISKLLDQIKVNKFLGDPNKFLVLPLHGSMPTINQRE 602
+ ++YI GA+LVFL GWN I + ++ N G +++ +LPLH +P QR+
Sbjct: 641 ALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLENNSHFGS-HRYQILPLHSQIPREEQRK 699
Query: 603 IFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKAS 662
+FD P K++L+TNIAE+SITI+DVVYV+D K K + A N + W SK +
Sbjct: 700 VFDPVPDGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTN 759
Query: 663 AHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQLPEILRTPLQELCLHIKSLQLGTVGSFL 722
QR+GRAGRV+PG C+ L R D + + PE+ RTPL E+ L IK L+LG +G FL
Sbjct: 760 LEQRKGRAGRVRPGFCFHLCSRARFDRLETHMTPEMFRTPLHEIALSIKLLRLGGIGQFL 819
Query: 723 SKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGKMLLMGAIFQCL 782
+KA++PP A+ A L+ + ALD + LTPLGR L LP++P GKM++MG IF
Sbjct: 820 AKAIEPPPLDAIIEAEHTLRELDALDANDELTPLGRILAKLPIEPRFGKMMIMGCIFYVG 879
Query: 783 NPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAKRNRRE 842
+ TI+AA PF ++ K + R+FAG+ SDH+ALL F + DA+ + E
Sbjct: 880 DAVCTISAATCFPEPF---ISEGKRLGYIHRNFAGNRFSDHVALLSVFQAWDDARMSGEE 936
Query: 843 RD--FCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYSHD--LEMVCAI 898
+ FC + L+ TL+M + + Q ++L + GF + + D L++V ++
Sbjct: 937 AEIRFCEQKRLNMATLRMTWEAKVQLKEILINSGFPEDCLLTQVFTNTGPDNNLDVVISL 996
Query: 899 LCAGLYPNVVQCKRKGKRAVFYTKEVGQVALHPSSVN----ANQNNFPLPYMVYSEMVKT 954
L G+YPNV C K KR + T E +H SSVN + +P P+ V+ E ++T
Sbjct: 997 LAFGVYPNV--CYHKEKRKIL-TTEGRNALIHKSSVNCPFSSQDMKYPSPFFVFGEKIRT 1053
Query: 955 NNINVYDSTNISEYALLLFGGNLIPS 980
I+ T ++ LLLF + S
Sbjct: 1054 RAISAKGMTLVTPLQLLLFASKKVQS 1079
>sp|P0C7L7|YUM14_USTMA Putative DEAH-box ATP-dependent helicase UM11114 OS=Ustilago maydis
(strain 521 / FGSC 9021) GN=UM04112 PE=3 SV=1
Length = 1567
Score = 434 bits (1117), Expect = e-120, Method: Compositional matrix adjust.
Identities = 303/850 (35%), Positives = 468/850 (55%), Gaps = 83/850 (9%)
Query: 267 SSDSGKAMLSFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSL 326
+S S M R LPA E L + N+V++++GETGCGKTTQ+PQFIL+E + +
Sbjct: 722 TSPSYSKMDETRRSLPAASAAREILGLIRSNRVVIIAGETGCGKTTQVPQFILDEAIEAG 781
Query: 327 RGADCNIICTQPRRISAISVAARVSSERGENL---------GETVGYQIRLESKRSAQTR 377
RG++CNI+ TQPRR+SAI VA+RV+ ERGE L G VGY IR E + S + R
Sbjct: 782 RGSECNIVVTQPRRVSAIGVASRVAVERGEKLDGKKKAVAPGSLVGYAIRGERRASRECR 841
Query: 378 LLFCTTGVLLRQLVE--DPDLSCVSHLLVDEIHERGMNEDFLLIILRDLLPRRPDLRLIL 435
LLF TTGVLLR+L D DL +SH++VDE+HER ++ DFLL+ LR+LL R ++++L
Sbjct: 842 LLFTTTGVLLRRLGAGGDTDLKGISHVVVDEVHERNVDSDFLLLELRELLRRNSRIKVVL 901
Query: 436 MSATINADLFSKYFGNAPTVHIPGLTFPVTDLFLEDVLEKTRYKMNSKLDSFQGNSRRSR 495
MSATIN + F+ YFG AP + IPG TF V D +LED+++++ ++ + + ++G++R +
Sbjct: 902 MSATINQETFASYFGKAPCISIPGRTFAVEDHYLEDIVQQSGFRPSG--NEWRGSARGGK 959
Query: 496 RQDSKKDHLTALFEDVDIDSNY-KNYRASTRASLEAWSAEQIDLGLVESTIEYICRH--- 551
+ + + L A + +D K + +R S +I L+ + + Y+
Sbjct: 960 QIEQEIGQLRAHLQAQGVDEETCKAVESLSR------SGGRISYELLGAVVRYVVERAEN 1013
Query: 552 -------EGD--GAILVFLTGWNDISKLLDQIKVNKFLGDPNKFLVLPLHGSMPTINQRE 602
+GD GAILVF G +I + +D I + + +K +LPLH ++ QR
Sbjct: 1014 EELSGAADGDVGGAILVFCPGVGEIRQAIDAITTS--VRGQSKVEILPLHANLSADEQRR 1071
Query: 603 IFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKAS 662
+F +RKIV++TN+AE+SITI DV YVVD G+ KET ++ + L L+ W S+A+
Sbjct: 1072 VFQPVGAGRRKIVVSTNVAETSITIPDVSYVVDTGRVKETRFEPESGLTRLVECWASRAA 1131
Query: 663 AHQRRGRAGRVQPGVCYKLYPRIIHD-AMLPYQLPEILRTPLQELCLHIKSLQLGT-VGS 720
QRRGRAGRV+ G C++LY R + + M Q PE+ R PL+ L L +KS++ V
Sbjct: 1132 CKQRRGRAGRVRAGECFRLYSRYVDEKKMAAQQTPEMRRVPLESLFLEVKSMREDEDVKE 1191
Query: 721 FLSKALQPPDPLAVQNAIELLKTIGALDD----MENLTPLGRHLCTLPVDPNIGKMLLMG 776
+L+KAL PP ++ A+ L GAL LT LG+HL LP+D + K+L+MG
Sbjct: 1192 YLNKALDPPSLASMDAALTNLIEAGALQSDRGYKSRLTSLGKHLAQLPLDLRLAKLLIMG 1251
Query: 777 AIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSC-SDHIALLKAFDGYKD 835
IF CL P LT+A+ ++ + F P ++E +A+ SFA C SD +A AF+ ++
Sbjct: 1252 TIFGCLGPMLTVASIMSCKPLFNTPFEKREEASKARASFAAAGCRSDLLADAAAFEEWQT 1311
Query: 836 AKRNRRE----RDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGP-SAYNRYSH 890
+ R+ R++C +F+S +L+ ++ R L L ++GFV Y+ +
Sbjct: 1312 MRAQRKTNGEIREWCESHFISQSSLRDIQTNRLDLLSHLQEMGFVAPDYSAFGVYDDERY 1371
Query: 891 DLE-----MVCAILCAGLYPNVVQC----------------KRKGKRAVFYTKEVGQVAL 929
D+ ++ +++ AGL+P VV+ + R V Y G+V L
Sbjct: 1372 DMNAQHAGVLRSVILAGLWPAVVRIDVPSAKFDQSSSGTVQREAEARQVKYFDRNGRVFL 1431
Query: 930 HPSSVNANQNNFPLPYMVYSEMVKT-----NNINVYDSTNISEYALLLFGGNL----IPS 980
HPSS + F Y+ T + + + D+T + +ALLLFGG L
Sbjct: 1432 HPSSTLFSCKGFESSYLTTFAKSSTGAGADSKVYLRDATEVPLFALLLFGGKLKINHFAG 1491
Query: 981 KTGEGIEMLGG------YLHFSASKTVLELIRKLRGELDKLLNRKIEDPRVDLSVEG-KA 1033
G G GG ++ A+ + L +LR LD +L+ I++P+ +V G K
Sbjct: 1492 GIGIGSNQSGGDAKDENWVRLRANARIGVLCAQLRRLLDAVLDHAIDEPQDMFAVPGCKD 1551
Query: 1034 VVSAVVELLH 1043
V+S + ++L
Sbjct: 1552 VLSVIGQVLQ 1561
>sp|Q22307|DHX9_CAEEL Probable ATP-dependent RNA helicase A OS=Caenorhabditis elegans
GN=rha-1 PE=2 SV=3
Length = 1301
Score = 432 bits (1112), Expect = e-120, Method: Compositional matrix adjust.
Identities = 278/790 (35%), Positives = 439/790 (55%), Gaps = 45/790 (5%)
Query: 262 QEKLKSSDSGKAMLSFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEE 321
+E K ++ + + R +LP + + ++ VAEN+V ++ GETGCGK+TQ+ QF+LE
Sbjct: 362 KEDFKRGEALDKITAQRGELPVAQYRENIVQTVAENRVTLIKGETGCGKSTQVAQFLLES 421
Query: 322 ELSSLRGADCNIICTQPRRISAISVAARVSSERGENLGETVGYQIRLESKRS-AQTRLLF 380
L + GA N + +QPRRISAIS+A RV++ERGE +GET GY +R +S ++F
Sbjct: 422 FLENSNGASFNAVVSQPRRISAISLAERVANERGEEVGETCGYNVRFDSATPRPYGSIMF 481
Query: 381 CTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFLLIILRDLLPRRPDLRLILMSATI 440
CT GVLLR + + L +SH+++DEIHER ++ DF+LI+LR+++ DLR++LMSATI
Sbjct: 482 CTVGVLLRMM--ENGLRGISHVIIDEIHERDVDTDFVLIVLREMISTYRDLRVVLMSATI 539
Query: 441 NADLFSKYF------GNAPTVHIPGLTFPVTDLFLEDVLEKTRY-------KMNSKLDSF 487
+ DLF+ +F G P + + G TFPV +LED+L ++ K K
Sbjct: 540 DTDLFTNFFSSIPDVGPTPVITMHGRTFPVQSFYLEDILHNLQHMPEEPDQKKRKKGGPP 599
Query: 488 QGNSRRSRRQDSKKDHLTALFEDVDIDSNYKNYRASTRASLEAWSAEQIDLGLVESTIEY 547
+ + K + D I+ S + ++ S + I G++E+ +
Sbjct: 600 PPDDDEGDEEVDDKGRNMNILTDPSINE-------SLKTAMSRISEKDIPFGVIEAILND 652
Query: 548 ICRHEGDGAILVFLTGWNDISKLLDQIKVNKFLGDPNKFLVLPLHGSMPTINQREIFDRP 607
I DGA+LVFL GW +I L +++ ++ G NK+ +LPLH + + QR++F+
Sbjct: 653 IASRGVDGAVLVFLPGWAEIMTLCNRLLEHQEFGQANKYEILPLHSQLTSQEQRKVFNHY 712
Query: 608 PPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASAHQRR 667
P KRKI+++TNIAE+SITIDDVVYV+D KAKE Y + N + W SK + QRR
Sbjct: 713 P-GKRKIIVSTNIAETSITIDDVVYVIDSCKAKERMYTSNNNMVHFATVWASKTNVIQRR 771
Query: 668 GRAGRVQPGVCYKLYPRIIHDAMLPYQLPEILRTPLQELCLHIKSLQLGTVGSFLSKALQ 727
GRAGRV+ G + L ++ +A+ + E+LR PL ++ L IK L+LG+VG FL KALQ
Sbjct: 772 GRAGRVRAGYAFHLCSKMRFEALDDHGTAEMLRIPLHQIALTIKLLRLGSVGEFLGKALQ 831
Query: 728 PPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGKMLLMGAIFQCLNPALT 787
PP V + +L+ +GALD LT LG+ L +P++P I K+L++G +
Sbjct: 832 PPPYDMVVESEAVLQAMGALDRNLELTSLGKMLARMPIEPVIAKVLILGTALGAGSVMCD 891
Query: 788 IAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAKR---NRRERD 844
+A+A++ PFV + +R FAG+ SDH+A++ GY++A + + ER+
Sbjct: 892 VASAMSFPTPFVPREKHHSRLSGTQRKFAGNKFSDHVAIVSVIQGYREAVQMGASAAERE 951
Query: 845 FCWENFLSPITLQMMEDMRSQFLDLL-------SDIGFVDKSKGPSAYNRYSHDLEMVCA 897
FC LS L+M + R Q +D+L DI F D S + +R +L ++ +
Sbjct: 952 FCERYSLSNPVLKMTDGARRQLIDVLRNQCSFPEDILF-DISVNVNGPDR---ELNLMRS 1007
Query: 898 ILCAGLYPNVVQCKRKGKRAVFYTKE----VGQVALHPSSVNANQNNFPLPYMVYSEMVK 953
+L LYPNV GKR V ++ + + ++ N + +FP P +V++E V+
Sbjct: 1008 LLVMALYPNVAY--YVGKRKVLTIEQSSALINKYSMLVPMNNRQEMDFPSPLLVFTEKVR 1065
Query: 954 TNNINVYDSTNISEYALLLFGGNLIPSKTGEGIEMLGGYLHFSASKTVLELIRKLRGELD 1013
T I+ + IS LL+FG + GEG+ + + + + + LR ++
Sbjct: 1066 TRCISCKQMSVISAIQLLVFGSRKVEC-VGEGLVRIDETITIRMNVSTAAALIGLRPCIE 1124
Query: 1014 KLLNRKIEDP 1023
LL + E+P
Sbjct: 1125 ALLVKSCENP 1134
>sp|Q14147|DHX34_HUMAN Probable ATP-dependent RNA helicase DHX34 OS=Homo sapiens GN=DHX34
PE=1 SV=2
Length = 1143
Score = 422 bits (1084), Expect = e-116, Method: Compositional matrix adjust.
Identities = 247/614 (40%), Positives = 341/614 (55%), Gaps = 64/614 (10%)
Query: 278 REKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQ 337
R LP + L+ + E+QV+VV+G+TGCGK+TQ+PQ++L S ++ CTQ
Sbjct: 159 RAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFS-------HVACTQ 211
Query: 338 PRRISAISVAARVSSERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVEDPDLS 397
PRRI+ IS+A RV E G VGYQIR ES RSA T+++F T G+LLRQ+ +P L
Sbjct: 212 PRRIACISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLRQIQREPSLP 271
Query: 398 CVSHLLVDEIHERGMNEDFLLIILRDLLPRRPDLRLILMSATINADLFSKYFGNAPTVHI 457
L+VDE+HER ++ DFLL +L+ LLP RPDL++ILMSATIN LFS YF NAP V +
Sbjct: 272 QYEVLIVDEVHERHLHNDFLLGVLQRLLPTRPDLKVILMSATINISLFSSYFSNAPVVQV 331
Query: 458 PGLTFPVTDLFLEDVLEKTRYKMNSKLDSFQGNSRRSRRQDSKKDHLTALFEDVDIDSNY 517
PG FP+T ++ E T K + KLD + L L ID Y
Sbjct: 332 PGRLFPITVVYQPQEAEPTTSK-SEKLDP--------------RPFLRVL---ESIDHKY 373
Query: 518 KNYRASTRASLEAWSAEQIDLGLVESTIEYICRHEGDGAILVFLTGWNDISKLLDQIKVN 577
E G +LVFL+G +IS +L+ +
Sbjct: 374 PP--------------------------------EERGDLLVFLSGMAEISAVLEAAQT- 400
Query: 578 KFLGDPNKFLVLPLHGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCG 637
+ +++VLPLH ++ +Q ++FD PP RK +L+TNIAE+S+TID + +VVD G
Sbjct: 401 -YASHTQRWVVLPLHSALSVADQDKVFDVAPPGVRKCILSTNIAETSVTIDGIRFVVDSG 459
Query: 638 KAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQLPE 697
K KE SYD KL L WIS+ASA QR+GRAGR PGVC++LY +DA PY +PE
Sbjct: 460 KVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAGRTGPGVCFRLYAESDYDAFAPYPVPE 519
Query: 698 ILRTPLQELCLHIKSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLG 757
I R L L L +KS+ +G +F ++PP P +++ AI L+ GALD E LTP+G
Sbjct: 520 IRRVALDSLVLQMKSMSVGDPRTF--PFIEPPPPASLETAILYLRDQGALDSSEALTPIG 577
Query: 758 RHLCTLPVDPNIGKMLLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAG 817
L LPVD IGKML++G++F + P LTIAAAL+ ++PF E A+R
Sbjct: 578 SLLAQLPVDVVIGKMLILGSMFSLVEPVLTIAAALSVQSPFTRSAQSSPECAAARRPLES 637
Query: 818 DSCSDHIALLKAFDGYKDAK--RNRRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGF 875
D D L F+ + K R+R R +C + L M ++R QF +LL D G
Sbjct: 638 DQ-GDPFTLFNVFNAWVQVKSERSRNSRKWCRRRGIEEHRLYEMANLRRQFKELLEDHGL 696
Query: 876 VDKSKGPSAYNRYS 889
+ ++ + YS
Sbjct: 697 LAGAQAAQVGDSYS 710
>sp|O94536|UCP12_SCHPO Putative ATP-dependent RNA helicase ucp12 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=ucp12 PE=3 SV=1
Length = 1327
Score = 421 bits (1082), Expect = e-116, Method: Compositional matrix adjust.
Identities = 300/869 (34%), Positives = 461/869 (53%), Gaps = 104/869 (11%)
Query: 195 LQMSIETE-RRVGNLLNSSQGNVPVNDSGIESSEVARRPKLSVKVANTISPPQSDSAKER 253
LQ +IE + +G+LLN S + V+ SS+ P + K N+ P ++E
Sbjct: 497 LQENIEDFLQNIGSLLNISAATIGVS----LSSQNKSAP--TAKKNNSFKPKLFRRSREL 550
Query: 254 LNVILKERQEKLKSSDSGKAMLSFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQ 313
+ E++KS S + + REKLPA++ + + + A+ +QV+V+SGETG GK+TQ
Sbjct: 551 SEKLCNNWSERVKSP-SYQLKVREREKLPAWESRRKIMDAIQHSQVVVISGETGSGKSTQ 609
Query: 314 LPQFILEEELSSLRGADCNIICTQPRRISAISVAARVSSERGENLGETVGYQIRLESKRS 373
+ QFIL+ LSS ++CTQPRRISAIS+A RV+ ER +G+ VGY + E S
Sbjct: 610 VVQFILDHYLSSGEKDLQTVVCTQPRRISAISLAERVAFERDTTVGKEVGYSVHGEKSIS 669
Query: 374 AQTRLLFCTTGVLLRQLVEDP--DLSCVSHLLVDEIHERGMNEDFLLIILRDLLPRRPDL 431
+T L FCTTG+LLR++ + LS +S ++VDE+HER + D LL +L+ ++ R P+L
Sbjct: 670 KETLLEFCTTGLLLRRIQQHGLGFLSTLSCVVVDEVHERSIENDILLTLLKLVISRIPNL 729
Query: 432 RLILMSATINADLFSKYFGNAPTVHIPGLTFPVTDLFLEDVLEKTRYKMNSKLDSFQGNS 491
++ILMSAT+N+D F YFGNA +HI G TFP+ D ++ED K +N D +
Sbjct: 730 KVILMSATVNSDTFKYYFGNAGHLHIHGRTFPIKDYYIEDFAPK----LNED-DDEEDVP 784
Query: 492 RRSRRQDSKKDHLTALFEDVDIDSNYKNYRASTRASLEAWSAEQIDLGLVESTIEYICRH 551
RR +++ HL + ID L S+
Sbjct: 785 RRKKKEYEIDYHLISRL------------------------VSSIDAELGSSS------- 813
Query: 552 EGDGAILVFLTGWNDISKLLDQIKVNKFLGDPNKFLVLPLHGSMPTINQREIFDRPPPNK 611
G+ILVFL G ++I++ + +IK D +KF VLPLH S+ T QR F K
Sbjct: 814 ---GSILVFLPGVSNIARCIREIKSK----DGSKFEVLPLHASLNTSEQRRCFK--TYTK 864
Query: 612 RKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAG 671
RKI+ ATNIAE+SITIDDVV V+D G+ K+ YD L +W S+A+ QRRGRAG
Sbjct: 865 RKIICATNIAETSITIDDVVAVIDSGRVKQIDYDVERDLVTFKETWASRAACQQRRGRAG 924
Query: 672 RVQPGVCYKLYPRIIHD-AMLPYQLPEILRTPLQELCLHI-----------KSLQLGTVG 719
RV+ G+CYKLY R + ML PE+LRT L ++CL++ S+ G++
Sbjct: 925 RVKKGICYKLYTRGFEEKGMLGQTPPEVLRTALSQVCLNVVPLVKRFSSAGNSVNQGSIK 984
Query: 720 SFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGKMLLMGAIF 779
F++ + PP+ V A++ L +GAL E+LT LG +L +LP+D +GK+L+ G+IF
Sbjct: 985 KFMNSLIDPPNDATVDLALKKLIQVGALTVSEDLTGLGEYLVSLPIDLKLGKLLVFGSIF 1044
Query: 780 QCLNPALTIAAALAHRNPFVLPVNMQKEVDEAK--RSFAGDSCSDHIALLKAFDGYKDAK 837
L PALTI A L+ ++PF+ DEA+ RS D +A + + + +
Sbjct: 1045 GYLEPALTITAILSTKSPFLGD-------DEAREIRSKQSQGWGDVLADARVYHNWLEIL 1097
Query: 838 RNR---RERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYS-HDLE 893
R + +C E L TLQ + R++ + + K K ++ YS +L
Sbjct: 1098 ETRGVKKTVQWCEEMHLHYTTLQQIRQNRNELSEAAQLLELTTK-KLTGNFDWYSTENLT 1156
Query: 894 MVCAILCAGLYPNVVQCKRKGKRAV-----------------FYTKEVGQVALHPSS--- 933
++ ++ A L PNVV+C K+ V FY + ++ +HPSS
Sbjct: 1157 VLSTLIAAALSPNVVKCVYPDKKFVASFSGSLEMEQEARLTKFYDQNNQRLFIHPSSTMF 1216
Query: 934 VNANQNNFPLPYMVYSEMVKTNNINVYDSTNISEYALLLFGGN-LIPSKTGEGIEMLGGY 992
VN+ N ++ Y + V+T + + T I+ Y ++L G N ++ G+G+ + Y
Sbjct: 1217 VNS-PNASRCTFVAYEQKVETTKPFLRNCTPINTYGMILLGANDILIDPLGKGLILDQAY 1275
Query: 993 LHFSASKTVLELIRKLRGELDKLLNRKIE 1021
+ K V+ L++ L+ LD L+ ++E
Sbjct: 1276 CIKAWPKVVI-LLKMLKRCLDASLHERLE 1303
>sp|Q9DBV3|DHX34_MOUSE Probable ATP-dependent RNA helicase DHX34 OS=Mus musculus GN=Dhx34
PE=2 SV=2
Length = 1145
Score = 411 bits (1056), Expect = e-113, Method: Compositional matrix adjust.
Identities = 246/614 (40%), Positives = 342/614 (55%), Gaps = 64/614 (10%)
Query: 278 REKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQ 337
R LP + L+ + E+QV+VV+G+TGCGK+TQ+PQ++L S ++ CTQ
Sbjct: 161 RAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFS-------HVACTQ 213
Query: 338 PRRISAISVAARVSSERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVEDPDLS 397
PRRI+ IS+A RV E G VGYQIR ES RSA T+++F T G+LLRQ+ +P L
Sbjct: 214 PRRIACISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLRQIQREPSLP 273
Query: 398 CVSHLLVDEIHERGMNEDFLLIILRDLLPRRPDLRLILMSATINADLFSKYFGNAPTVHI 457
L+VDE+HER ++ DFLL +L+ LLP+RPDL++ILMSATIN LFS YF +AP V +
Sbjct: 274 QYQVLIVDEVHERHLHNDFLLGVLQRLLPQRPDLKVILMSATINISLFSSYFSHAPVVQV 333
Query: 458 PGLTFPVTDLFLEDVLEKTRYKMNSKLDSFQGNSRRSRRQDSKKDHLTALFEDVDIDSNY 517
PG FP+T ++ ++T K + KLD + L L
Sbjct: 334 PGRLFPITVVYQPQEADQTASK-SEKLDP--------------RPFLRVL---------- 368
Query: 518 KNYRASTRASLEAWSAEQIDLGLVESTIEYICRHEGDGAILVFLTGWNDISKLLDQIKVN 577
E ID +Y GD +LVFL+G +I+ +LD +
Sbjct: 369 ----------------EAID-------NKYPPEERGD--LLVFLSGMAEITTVLDAAQAY 403
Query: 578 KFLGDPNKFLVLPLHGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCG 637
L +++VLPLH ++ +Q ++FD P RK +L+TNIAE+S+TID + +VVD G
Sbjct: 404 ASLT--QRWVVLPLHSALSVSDQDKVFDVAPAGVRKCILSTNIAETSVTIDGIRFVVDSG 461
Query: 638 KAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQLPE 697
K KE SYD KL L WIS+ASA QR+GRAGR PGVCY+LY +DA PY +PE
Sbjct: 462 KVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAGRTGPGVCYRLYAESDYDAFAPYPVPE 521
Query: 698 ILRTPLQELCLHIKSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLG 757
I R L L L +KS+ +G +F ++PP P +V+ AI L+ GALD E LTP+G
Sbjct: 522 IRRVALDALVLQMKSMSVGDPRTF--PFIEPPPPASVETAILYLQEQGALDSSEALTPIG 579
Query: 758 RHLCTLPVDPNIGKMLLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAG 817
L LPVD IGKML++G++F P LTIAAAL+ ++PF + A+R
Sbjct: 580 SLLAQLPVDVVIGKMLILGSMFSLAEPVLTIAAALSVQSPFTRSAQSNLDCATARRPLES 639
Query: 818 DSCSDHIALLKAFDGYKDAKRNR--RERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGF 875
D D L F+ + K R R +C + L M ++R QF +LL D G
Sbjct: 640 DQ-GDPFTLFNVFNAWVQVKSERSGNSRKWCRRRGVEEHRLYEMANLRRQFKELLEDHGL 698
Query: 876 VDKSKGPSAYNRYS 889
+ ++ + + YS
Sbjct: 699 LSGAQVVAPGDSYS 712
>sp|O60114|YG65_SCHPO Uncharacterized helicase C15C4.05 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPBC15C4.05 PE=3 SV=1
Length = 1428
Score = 410 bits (1054), Expect = e-113, Method: Compositional matrix adjust.
Identities = 277/818 (33%), Positives = 441/818 (53%), Gaps = 57/818 (6%)
Query: 268 SDSGKAMLSFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLR 327
S+S + FR +LPA + + AV +Q+L++SG+TGCGK+TQ+P F+LE S+
Sbjct: 618 SESAEKFKVFRNQLPATMFRETIIDAVNNSQLLIISGDTGCGKSTQIPAFLLEN--STKN 675
Query: 328 GADCNIICTQPRRISAISVAARVSSERGEN-----LGETVGYQIRLESKRSAQTRLLFCT 382
G I T+PRRISAIS+A RVS E G N E VGY +RL+SK + T L + T
Sbjct: 676 GKAVKIYVTEPRRISAISLANRVSQELGGNPPSARSHELVGYSVRLDSKCTPLTPLTYVT 735
Query: 383 TGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFLLIILRDLLPRRPDLRLILMSATINA 442
TG LR L ++ V+HL++DE+HER ++ D LLI + LL + P L++I+MSAT+NA
Sbjct: 736 TGTFLRLLEVGNEIESVTHLIIDEVHERSIDSDLLLIHVLHLLKQHPHLKIIIMSATLNA 795
Query: 443 DLFSKYFGNAPTVHIPGLTFPVTDLFLEDVLEK----TRYKMNSKLDSFQGNSRRSRRQD 498
+ F YF + + IPG T+PV +LED+L + + + D + + + +QD
Sbjct: 796 EKFQLYFEGSNLITIPGKTYPVHRFYLEDILSQFGNDKSFGNAAGQDVIEEDDYETDQQD 855
Query: 499 SKKDHLTALFEDVDIDSNYKNYRASTRASLEAWSAEQ-IDLGLVESTIEYICRHEGD--- 554
+ + +A ED ++ N + AW E+ I+ GL+ ++YI EGD
Sbjct: 856 ASISNKSA--EDAIVEMNL----------IPAWYNEKAINYGLIVYLLKYIFT-EGDPKF 902
Query: 555 -GAILVFLTGWNDISKLLDQIKVNKFLGDPNKFLVLPLHGSMPTINQREIFDRPPPNKRK 613
+LVFL G ++I ++ I+ + KF + LH ++ + Q+ +F+ PP RK
Sbjct: 903 SKCVLVFLPGISEILRVKSLIEDMPMFRNHRKFCIYMLHSTLSSAQQQSVFNIPPKGCRK 962
Query: 614 IVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRV 673
IVL+TNIAE+ +TI DV V+D G +E Y++ L+ L +++SKA+A QR GRAGRV
Sbjct: 963 IVLSTNIAETGVTIPDVTCVIDTGVHREMRYNSRRHLSRLTDTFVSKANAKQRSGRAGRV 1022
Query: 674 QPGVCYKLYPRIIHDA-MLPYQLPEILRTPLQELCLHIKSLQLGTVGSFLSKALQPPDPL 732
Q G+CY L+ + HD L YQ PEILR LQE+ L +K Q+G V L KAL PP
Sbjct: 1023 QEGICYHLFSKFKHDTQFLSYQTPEILRLNLQEVVLRVKMCQMGDVQDVLGKALDPPSST 1082
Query: 733 AVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGKMLLMGAIFQCLNPALTIAAAL 792
+ A+E L +GAL + E LT LG+ L LPVD N+GK+L++G ++C++ A +I A L
Sbjct: 1083 NIIRALEKLHQVGALSENEKLTKLGKFLSQLPVDANLGKILVLGCFYKCVDAASSIVAML 1142
Query: 793 AHRNPFVLPVNMQKEVDEAKRSFAGDSC-SDHIALLKAFDGYKD---AKRNRRERDFCWE 848
+PF V+ + ++A+ SFA ++ SD + + A+ +++ + E F E
Sbjct: 1143 TIGSPFRKSVDNEFSANKARLSFAKENTRSDLVLMYYAYCAWREICLSPLGPDEDSFAKE 1202
Query: 849 NFLSPITLQMMEDMRSQFLDLLSDIGF-----VDKSKG------------PSAYNRYSHD 891
+L+ L M E ++ Q L L D+ VD K P ++ S +
Sbjct: 1203 KYLNLEALSMTESLKIQLLSELKDMKLLGASDVDTCKSLKRSICRRFAVIPKEHDINSGN 1262
Query: 892 LEMVCAILCAGLYPNVVQCKRKGKRAVFYTKEVGQVALHPSSVNANQN--NFPLPYMVYS 949
E++C ++ A LYPN+++ + KR +V + SVN N P ++ Y+
Sbjct: 1263 AEILCGVIAASLYPNILRYDYE-KRQWSTLSTNKRVRILDVSVNNRSELPNMPSKFVAYT 1321
Query: 950 EMVKTNNINVY--DSTNISEYALLLFGGNLIPSKTGEGIEMLGGYLHFSASKTVLELIRK 1007
M+ + + Y ++T ++ LL+ G + ++ G L + + + V +
Sbjct: 1322 NMMSSTRASEYVNETTMVTLRQLLMMCGLKVENRVSVGQAKLDNFTVYFENVYVSASLSI 1381
Query: 1008 LRGELDKLLNRKIEDP-RVDLSVEGKAVVSAVVELLHG 1044
LR ++ LN +P + L+ + +V+ V L +G
Sbjct: 1382 LRRFIETSLNEFFAEPDKRLLNSHLEVIVNIVSRLNYG 1419
>sp|Q06698|YL419_YEAST Putative ATP-dependent RNA helicase YLR419W OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=YLR419W PE=1
SV=1
Length = 1435
Score = 374 bits (960), Expect = e-102, Method: Compositional matrix adjust.
Identities = 238/676 (35%), Positives = 393/676 (58%), Gaps = 42/676 (6%)
Query: 250 AKERLNVILKERQEKLKSSDSGKAMLSFREKLPAFKMKAEFLKAVAENQVLVVSGETGCG 309
+++ L+V+ +E +++KSS+ K+M RE+LPA+K + + + +N+V++++GETG G
Sbjct: 574 SEDTLSVLREEYTKRIKSSEY-KSMQLVREQLPAWKKQKVIIDIINKNEVVLITGETGSG 632
Query: 310 KTTQLPQFILEEELSSLRG--ADCNIICTQPRRISAISVAARVSSERGENLGETVGYQIR 367
K+TQ+ QFIL+ L +G I+CTQPRRISAI +A RVS ER GE VGY IR
Sbjct: 633 KSTQVVQFILDF-LQKEKGDFGKTKIVCTQPRRISAIGLAERVSDERCVTCGEEVGYVIR 691
Query: 368 LESKRSAQTRLLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFLLIILRDLLPR 427
+K A TR+ F TTGVL+R L + + +++DE+HER ++ D ++ ++++LL R
Sbjct: 692 GVNKTKASTRIKFMTTGVLVRLLQNARTMLENTIVVIDEVHERSIDTDLIVTLMKNLLHR 751
Query: 428 RPDLRLILMSATINADLFSKYFGNAPTVHIPGLTFPVTDLFLEDVLEKTRYKMN-SKLDS 486
++++LMSAT+N DLF K+F T HI G TFP+TD FLED+L +K+ K S
Sbjct: 752 VRGMKIVLMSATVNVDLFKKFFPGLATCHIEGRTFPITDYFLEDILSDLDFKIKREKALS 811
Query: 487 FQGNSRRSRRQDSKKDHLTALFEDVDIDSNYKNYRASTRASLEAWSAEQIDLGLVESTIE 546
+ +S R D + Y RA ++ +++ QI+ L+ +E
Sbjct: 812 YDDDSVDERNNDDQ----------------YLKPRADSK----FFTSGQINYDLLCQVVE 851
Query: 547 YICRH----EGDGAILVFLTGWNDISKLLDQIKVNKFLGDPNKFLVLPLHGSMPTINQRE 602
Y+ + +G+I+VFL G +I+K + + NK + F+VLPLH ++ +Q+
Sbjct: 852 YVHKRLKAANDNGSIIVFLPGVGEINKCCNLL-ANK--SNEADFMVLPLHSALTPEDQKR 908
Query: 603 IFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKAS 662
+F + KRK+V++TNIAE+SITIDD V +D G+AK Y+ + L+ S+ISKA
Sbjct: 909 VF-KKYHGKRKVVVSTNIAETSITIDDCVATIDTGRAKSMFYNPKDNTTKLIESFISKAE 967
Query: 663 AHQRRGRAGRVQPGVCYKLYPRIIHDA-MLPYQLPEILRTPLQELCLHIKSLQLGTVGSF 721
QRRGRAGRV+ G+ YKL+ + +++ M+ +PEI R PL+ L L +K++ + V +F
Sbjct: 968 VKQRRGRAGRVREGLSYKLFSKNLYENDMISMPIPEIKRIPLESLYLSVKAMGIKDVKAF 1027
Query: 722 LSKALQPPDPLAVQNAIELLKTIGALDDME-NLTPLGRHLCTLPV-DPNIGKMLLMGAIF 779
LS AL P A+Q A +L TIG +D+ + +LT LG+ + +PV D GK+L+ G +F
Sbjct: 1028 LSTALDAPPLPALQKAERILTTIGLVDESDKSLTQLGQFISLMPVMDSKHGKLLIYGILF 1087
Query: 780 QCLNPALTIAAALA-HRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAKR 838
C + ++ + + L PF+ ++++ + + +S D A+L+ Y K
Sbjct: 1088 GCTDISVLLVSILGIGVLPFIGGFENREKIKKLLCKY--ESRGDLFAVLEIVRDYFKIKD 1145
Query: 839 NRRERDFCWENFLSPITLQMMEDMRSQFLDLLSDIGFV--DKSKGP-SAYNRYSHDLEMV 895
+ +R + +N LS + ++ +Q+ +L D+GF+ D G S NR + +++
Sbjct: 1146 SSIKRKYLRDNLLSYNKINEIKSSTAQYYSILKDVGFLPMDYKVGSISDLNRNERNFDIL 1205
Query: 896 CAILCAGLYPNVVQCK 911
AIL YP++ + +
Sbjct: 1206 RAILTGAFYPHIARVQ 1221
>sp|Q54NJ4|DHX15_DICDI Putative pre-mRNA-splicing factor ATP-dependent RNA helicase dhx15
OS=Dictyostelium discoideum GN=dhx15 PE=3 SV=1
Length = 727
Score = 373 bits (957), Expect = e-102, Method: Compositional matrix adjust.
Identities = 248/722 (34%), Positives = 381/722 (52%), Gaps = 92/722 (12%)
Query: 274 MLSFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNI 333
+L R++LP +K K +F+K + ENQV+++ GETG GKTTQ+PQF+++ L +R +
Sbjct: 70 ILEKRKELPVWKQKEDFIKVIKENQVVILVGETGSGKTTQIPQFVVDAGL--IRPGKM-V 126
Query: 334 ICTQPRRISAISVAARVSSERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVED 393
TQPRR++AISVA RVS E LGE VGY IR E SA+T + + T G+LLR+ + D
Sbjct: 127 GVTQPRRVAAISVAKRVSEEMDFELGEEVGYSIRFEELSSARTFMKYLTDGMLLRESMSD 186
Query: 394 PDLSCVSHLLVDEIHERGMNEDFLLIILRDLLPRRPDLRLILMSATINADLFSKYFGNAP 453
P L+ +++DE HER ++ D L +++D+L RR DL+LI+MSAT+ A F KYF NAP
Sbjct: 187 PTLNKYDVIILDEAHERTLSTDILFGLIKDILKRRKDLKLIVMSATLEAGKFQKYFENAP 246
Query: 454 TVHIPGLTFPVTDLFLEDVLEKTRYKMNSKLDSFQGNSRRSRRQDSKKDHL-TALFEDVD 512
+ +PG PV + E+ + KD+L +A+ +D
Sbjct: 247 LIKVPGRLHPVEIFYTEE---------------------------AAKDYLESAVRTVID 279
Query: 513 IDSNYKNYRASTRASLEAWSAEQIDLGLVESTIEYICRHEGDGAILVFLTGWNDISKLLD 572
I +N EG G ILVFLTG +I
Sbjct: 280 IHTN-----------------------------------EGTGDILVFLTGEEEIEDTCA 304
Query: 573 QIKVNKFLGDPNKFLVLPLHGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVY 632
+I+ LPL+ S+P Q +IFD +RK +++TNIAE+S+TID +V+
Sbjct: 305 KIQRETRERGLPPMKTLPLYSSLPIYQQSKIFD--TCKERKCIVSTNIAETSLTIDGIVF 362
Query: 633 VVDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPGVCYKLYP-RIIHDAML 691
VVD G +K+ +Y+ +++ LL + ISKASA+QR GRAGR +PG C++LY + + M+
Sbjct: 363 VVDPGFSKQKTYNPRSRVESLLVAPISKASANQRAGRAGRTRPGKCFRLYTEKAFKELMI 422
Query: 692 PYQLPEILRTPLQELCLHIKSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDME 751
PEILR+ L + L + L+LG V + PP P + A+E+L +GALDD
Sbjct: 423 QQTHPEILRSNLASVVLQL--LKLGVVDLVHFDFMDPPVPDTLIRALEVLHYLGALDDEG 480
Query: 752 NLTPLGRHLCTLPVDPNIGKMLLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEA 811
LT +G + P+DP + KML++ A C N LTIAA L+ N F+ P + + E D A
Sbjct: 481 QLTEIGSIMSEFPLDPQLSKMLIVSAERSCSNEILTIAAMLSAPNCFMRPKDNRIEADSA 540
Query: 812 KRSFAGDSCSDHIALLKAFDGYKDAKRNRRERDFCWENFLSPITLQMMEDMRSQFLDLLS 871
K+SF DH+ +L + + K+N + +C++NFL+ ++ + +RSQ +L+
Sbjct: 541 KKSFDHFD-GDHLTMLNVYHSF---KKNGEDPTWCYDNFLNHRAIKQADSVRSQLARILT 596
Query: 872 DIGFVDKSKGPSAYNRYSHDLEMVCAILCAGLYPNVVQCKRKGKRAVFYT-KEVGQVALH 930
S ++ Y E + + AG + V +C++K +++T + V H
Sbjct: 597 RFKLPLVSGDVNSKFYY----ENIKKCIAAGFFMQVAKCEKKN---IYFTLGDEQSVIFH 649
Query: 931 PSSVNANQNNFPLPYMVYSEMVKTNNINVYDSTNIS-----EYALLLFGGNLIPSKTGEG 985
PS+ + F +Y+E V T+ + T++ E A F P KT E
Sbjct: 650 PSTGLTRRPEF----CIYNEFVLTSENYIRTITDVKFDWLLELAPSYFKQKSFPKKTKET 705
Query: 986 IE 987
I+
Sbjct: 706 IQ 707
>sp|O22899|DHX15_ARATH Probable pre-mRNA-splicing factor ATP-dependent RNA helicase
OS=Arabidopsis thaliana GN=At2g47250 PE=2 SV=1
Length = 729
Score = 365 bits (938), Expect = e-100, Method: Compositional matrix adjust.
Identities = 246/706 (34%), Positives = 373/706 (52%), Gaps = 93/706 (13%)
Query: 274 MLSFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELS--SLRGADC 331
+L R LP + K +FL + NQ L++ GETG GKTTQ+PQF+L+ ++ S +G
Sbjct: 58 ILEKRRDLPVWLQKDDFLNTLNSNQTLILVGETGSGKTTQIPQFVLDAVVADNSDKGRKW 117
Query: 332 NIICTQPRRISAISVAARVSSERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLV 391
+ CTQPRR++A+SV+ RV+ E ++GE VGY IR E S++T L + T G+LLR+ +
Sbjct: 118 LVGCTQPRRVAAMSVSRRVADEMDVSIGEEVGYSIRFEDCTSSRTMLKYLTDGMLLREAM 177
Query: 392 EDPDLSCVSHLLVDEIHERGMNEDFLLIILRDLLPRRPDLRLILMSATINADLFSKYFGN 451
DP L +++DE HER + D L +L+++L RPDL+L++MSAT+ A+ F +YF
Sbjct: 178 ADPLLERYKVIILDEAHERTLATDVLFGLLKEVLRNRPDLKLVVMSATLEAEKFQEYFSG 237
Query: 452 APTVHIPGLTFPVTDLFLEDVLEKTRYKMNSKLDSFQGNSRRSRRQDSKKDHLTALFEDV 511
AP + +PG PV + Q+ ++D+L A V
Sbjct: 238 APLMKVPGRLHPVEIFYT---------------------------QEPERDYLEAAIRTV 270
Query: 512 DIDSNYKNYRASTRASLEAWSAEQIDLGLVESTIEYICRHEGDGAILVFLTGWNDISKLL 571
QI ++C GD ILVFLTG +I
Sbjct: 271 ----------------------VQI----------HMCEPPGD--ILVFLTGEEEIEDAC 296
Query: 572 DQI-KVNKFLGD---PNKFLVLPLHGSMPTINQREIFDRPP-------PNKRKIVLATNI 620
+I K LGD P K V+PL+ ++P Q++IFD P P RKIV++TNI
Sbjct: 297 RKINKEVSNLGDQVGPVK--VVPLYSTLPPAMQQKIFDPAPVPLTEGGPAGRKIVVSTNI 354
Query: 621 AESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPGVCYK 680
AE+S+TID +VYV+D G AK+ Y+ ++ LL S ISKASAHQR GRAGR +PG C++
Sbjct: 355 AETSLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRSGRAGRTRPGKCFR 414
Query: 681 LYP-RIIHDAMLPYQLPEILRTPLQELCLHIKSLQLGTVGSFLSKALQPPDPLAVQNAIE 739
LY + ++ + P PEILR+ L L +K L + + F + PP P + A+E
Sbjct: 415 LYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHF--DFMDPPAPETLMRALE 472
Query: 740 LLKTIGALDDMENLTPLGRHLCTLPVDPNIGKMLLMGAIFQCLNPALTIAAALAHRNPFV 799
+L +GALDD NLT G + P+DP + KML++ F C N L+++A L+ N FV
Sbjct: 473 VLNYLGALDDEGNLTKTGEIMSEFPLDPQMSKMLIVSPEFNCSNEILSVSAMLSVPNCFV 532
Query: 800 LPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAKRNRRERDFCWENFLSPITLQMM 859
P QK DEAK F G DH+ LL + Y K+N + ++C+ENF++ ++
Sbjct: 533 RPREAQKAADEAKARF-GHIDGDHLTLLNVYHAY---KQNNEDPNWCFENFVNNRAMKSA 588
Query: 860 EDMRSQFLDLLSDIGFVDKSKGPSAYNRYSHDLEMVCAILCAGLYPNVVQCKRKGKRAVF 919
+++R Q + ++S + +N + + + A+L AG + V +R G
Sbjct: 589 DNVRQQLVRIMSRFNL---KMCSTDFNSRDYYVNIRKAML-AGYFMQVAHLERTGHYLTV 644
Query: 920 YTKEVGQVALHPSSVNANQNNFPLPYMVYSEMVKTNNINVYDSTNI 965
+V V LHPS+ ++ +++Y+E V T + T+I
Sbjct: 645 KDNQV--VHLHPSNCLDHKPE----WVIYNEYVLTTRNFIRTVTDI 684
>sp|O42945|DHX15_SCHPO Probable pre-mRNA-splicing factor ATP-dependent RNA helicase prp43
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=prp43 PE=3 SV=1
Length = 735
Score = 365 bits (936), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 265/778 (34%), Positives = 385/778 (49%), Gaps = 117/778 (15%)
Query: 220 DSGIESSEVARRPKLSVKVANTISPPQSDSAKERLNVILKERQEKLKSSDSGKAMLSFRE 279
++G +S EV L+ + A T++ Q+ A+E N ++ S + +L R
Sbjct: 21 NNGDDSEEVVSSKGLTRR-ATTVA--QAAKAEEGPNNFFNDK----PFSQNYFKILETRR 73
Query: 280 KLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQPR 339
+LP ++ + EFLK ENQ++V GETG GKTTQ+PQF+L +EL L + I CTQPR
Sbjct: 74 ELPVYQQREEFLKIYHENQIIVFVGETGSGKTTQIPQFVLYDELPHL--TNTQIACTQPR 131
Query: 340 RISAISVAARVSSERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVEDPDLSCV 399
R++A+SVA RV+ E +LGE VGY IR E T L + T G+LLR+ + D LS
Sbjct: 132 RVAAMSVAKRVADEMDVDLGEEVGYNIRFEDCSGPNTLLKYMTDGMLLREAMTDHMLSRY 191
Query: 400 SHLLVDEIHERGMNEDFLLIILRDLLPRRPDLRLILMSATINADLFSKYFGNAPTVHIPG 459
S +++DE HER + D L+ +++ L RRPDL++I+MSAT++A F KYF +AP + +PG
Sbjct: 192 SCIILDEAHERTLATDILMGLMKRLATRRPDLKIIVMSATLDAKKFQKYFFDAPLLAVPG 251
Query: 460 LTFPVTDLFLEDVLEKTRYKMNSKLDSFQGNSRRSRRQDSKKDHLTALFEDVDIDSNYKN 519
T+PV + Q+ ++D+L A
Sbjct: 252 RTYPVEIYYT---------------------------QEPERDYLEAALR---------- 274
Query: 520 YRASTRASLEAWSAEQIDLGLVESTIEYICRHEGDGAILVFLTGWNDISKLLDQIKVNK- 578
T+ I EG G ILVFLTG +I +I +
Sbjct: 275 ------------------------TVLQIHVEEGPGDILVFLTGEEEIEDACRKITLEAD 310
Query: 579 ---FLGDPNKFLVLPLHGSMPTINQREIFDRPPPNK-----RKIVLATNIAESSITIDDV 630
G V PL+GS+P Q+ IF+ P + RK+V++TNIAE+S+TID +
Sbjct: 311 DLVREGAAGPLKVYPLYGSLPPNQQQRIFEPTPEDTKSGYGRKVVISTNIAETSLTIDGI 370
Query: 631 VYVVDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPGVCYKLYP-RIIHDA 689
VYVVD G +K+ Y+ ++ LL S ISKASA QR GRAGR +PG C++LY
Sbjct: 371 VYVVDPGFSKQKIYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEEAFRKE 430
Query: 690 MLPYQLPEILRTPLQELCLHIKSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDD 749
++ PEILR+ L L +K L + + F + PP P + A+E L + LDD
Sbjct: 431 LIEQTYPEILRSNLSSTVLELKKLGIDDLVHF--DYMDPPAPETMMRALEELNYLNCLDD 488
Query: 750 MENLTPLGRHLCTLPVDPNIGKMLLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVD 809
+LTPLGR P+DPN+ ML+ F C N L++ A L+ N FV P + +K D
Sbjct: 489 NGDLTPLGRKASEFPLDPNLAVMLIRSPEFYCSNEVLSLTALLSVPNVFVRPNSARKLAD 548
Query: 810 EAKRSFAGDSCSDHIALLKAFDGYKDAKRNRRERDFCWENFLSPITL--------QMMED 861
E ++ F DH+ LL + YK + D+CW +FLS L Q+
Sbjct: 549 EMRQQFTHPD-GDHLTLLNVYHAYKSGEGT---ADWCWNHFLSHRALISADNVRKQLRRT 604
Query: 862 MRSQFLDLLSDIGFVDKSKGPSAYNRYSHDLEMVCAILCAGLYPNVVQCKRKGKRAVFYT 921
M Q ++L+S F DK N Y + + L +G + V + GK V
Sbjct: 605 MERQEVELIS-TPFDDK-------NYYVN----IRRALVSGFFMQVAKKSANGKNYV-TM 651
Query: 922 KEVGQVALHPS---SVNANQNNFPLPYMVYSEMVKTNNINVYDSTNISEYALLLFGGN 976
K+ V+LHPS SV ++VY+E V T + + T I L+ N
Sbjct: 652 KDNQVVSLHPSCGLSVTPE-------WVVYNEFVLTTKSFIRNVTAIRPEWLIELAPN 702
>sp|P53131|PRP43_YEAST Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=PRP43 PE=1 SV=1
Length = 767
Score = 361 bits (927), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 239/702 (34%), Positives = 363/702 (51%), Gaps = 84/702 (11%)
Query: 274 MLSFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNI 333
+L R +LP + EFLK NQ++V GETG GKTTQ+PQF+L +E+ L + +
Sbjct: 86 ILKIRRELPVHAQRDEFLKLYQNNQIMVFVGETGSGKTTQIPQFVLFDEMPHLE--NTQV 143
Query: 334 ICTQPRRISAISVAARVSSERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVED 393
CTQPRR++A+SVA RV+ E LGE VGY IR E+K S +T L + T G+LLR+ +ED
Sbjct: 144 ACTQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLLREAMED 203
Query: 394 PDLSCVSHLLVDEIHERGMNEDFLLIILRDLLPRRPDLRLILMSATINADLFSKYFGNAP 453
DLS S +++DE HER + D L+ +L+ ++ RRPDL++I+MSAT++A+ F +YF +AP
Sbjct: 204 HDLSRYSCIILDEAHERTLATDILMGLLKQVVKRRPDLKIIIMSATLDAEKFQRYFNDAP 263
Query: 454 TVHIPGLTFPVTDLFLEDVLEKTRYKMNSKLDSFQGNSRRSRRQDSKKDHLTALFEDVDI 513
+ +PG T+PV +L+ ++ LDS + + D L L + +I
Sbjct: 264 LLAVPGRTYPV-ELYYTPEFQR------DYLDSAIRTVLQIHATEEAGDILLFLTGEDEI 316
Query: 514 DSNYKNYRASTRASLEAWSAEQIDLGLVESTIEYICRHEGDGAILVFLTGWNDISKLLDQ 573
+ A + SLE + + R EG G + V+
Sbjct: 317 ED------AVRKISLEG---------------DQLVREEGCGPLSVY------------- 342
Query: 574 IKVNKFLGDPNKFLVLPLHGSMPTINQREIFDRPPPNK-----RKIVLATNIAESSITID 628
PL+GS+P Q+ IF+ P + RK+V++TNIAE+S+TID
Sbjct: 343 ----------------PLYGSLPPHQQQRIFEPAPESHNGRPGRKVVISTNIAETSLTID 386
Query: 629 DVVYVVDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPGVCYKLYP-RIIH 687
+VYVVD G +K+ Y+ ++ LL S ISKASA QR GRAGR +PG C++LY
Sbjct: 387 GIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEEAFQ 446
Query: 688 DAMLPYQLPEILRTPLQELCLHIKSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGAL 747
++ PEILR+ L L +K L + + F + PP P + A+E L + L
Sbjct: 447 KELIEQSYPEILRSNLSSTVLELKKLGIDDLVHF--DFMDPPAPETMMRALEELNYLACL 504
Query: 748 DDMENLTPLGRHLCTLPVDPNIGKMLLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKE 807
DD NLTPLGR P+DP + ML+ FQC LTI A L+ N F+ P +K
Sbjct: 505 DDEGNLTPLGRLASQFPLDPMLAVMLIGSFEFQCSQEILTIVAMLSVPNVFIRPTKDKKR 564
Query: 808 VDEAKRSFAGDSCSDHIALLKAFDGYK-DAKRNRRERDFCWENFLSPITLQMMEDMRSQF 866
D+AK FA DHI LL + +K D +C +++L+ +L +++RSQ
Sbjct: 565 ADDAKNIFAHPD-GDHITLLNVYHAFKSDEAYEYGIHKWCRDHYLNYRSLSAADNIRSQL 623
Query: 867 LDLLSDIGF---VDKSKGPSAYNRYSHDLEMVCAILCAGLYPNVVQCKRKGKRAVFYTKE 923
L++ + P ++ + L +G + V + KR G + K+
Sbjct: 624 ERLMNRYNLELNTTDYESPKYFDN-------IRKALASGFFMQVAK-KRSGAKGYITVKD 675
Query: 924 VGQVALHPSSVNANQNNFPLPYMVYSEMVKTNNINVYDSTNI 965
V +HPS+V + +++Y+E V T+ + T++
Sbjct: 676 NQDVLIHPSTVLGHDAE----WVIYNEFVLTSKNYIRTVTSV 713
>sp|B2RR83|YTDC2_MOUSE Probable ATP-dependent RNA helicase YTHDC2 OS=Mus musculus GN=Ythdc2
PE=2 SV=1
Length = 1445
Score = 360 bits (925), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 213/587 (36%), Positives = 327/587 (55%), Gaps = 60/587 (10%)
Query: 513 IDSNYKNYRASTRASLEAWSA----EQIDLGLVESTIEYICRHEGDGAILVFLTGWNDIS 568
+ +N + A R L+A+ E++DL L+ + IC GAIL+FL G+++I
Sbjct: 592 VQTNGNDLSAEDRELLKAYHHSFDDEKVDLDLIMHLLYNICHSCDAGAILIFLPGYDEIV 651
Query: 569 KLLDQIKVN--KFLGDPNKFLVLPLHGSMPTINQREIFDRPPPNKRKIVLATNIAESSIT 626
L D+I + +F + +++ V LH +M T +Q+++ PP RKI+L+TNIAE+SIT
Sbjct: 652 GLRDRILFDDKRFADNTHRYQVFMLHSNMQTSDQKKVLKNPPAGVRKIILSTNIAETSIT 711
Query: 627 IDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRII 686
++DVV+V+D GK KE S+DALN + L WISKASA QR+GRAGR +PG+C++L+ R+
Sbjct: 712 VNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGRAGRCRPGICFRLFSRLR 771
Query: 687 HDAMLPYQLPEILRTPLQELCLHIKSLQL--GTVGSFLSKALQPPDPLAVQNAIELLKTI 744
ML +Q PE+LR PLQELCLH K L T+ FL KA +PP L V+NA+++LKTI
Sbjct: 772 FQNMLEFQTPELLRMPLQELCLHTKLLAPVNCTIADFLMKAPEPPPALIVRNAVQMLKTI 831
Query: 745 GALDDMENLTPLGRHLCTLPVDPNIGKMLLMGAIFQCLNPALTIAAALAHRNPFVLPV-- 802
A+D E+LT LG HL LPV+P++GKM+L + +CL+P LTIA LA+R+PFVLP
Sbjct: 832 DAMDAWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCLDPILTIACTLAYRDPFVLPTQA 891
Query: 803 NMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAKRNRRERDFCWENFLSPITLQMMEDM 862
+ ++ ++ F + SDH+ALL+AF ++ A+ + ER FC +NFLS T++++ M
Sbjct: 892 SQKRAAMLCRKRFTAGTFSDHMALLRAFQAWQKARSDGWERAFCEKNFLSQATMEIIIGM 951
Query: 863 RSQFLDLLSDIGFVDKSKGPSA--YNRYSHDLEMVCAILCAGLYPNVVQCKRKGKRAVFY 920
R+Q L L GFV G N S + +V A L AG+YPN+V R+ +
Sbjct: 952 RTQLLGQLRASGFVRARGGGDIRDVNTNSENWAVVKAALVAGMYPNLVHVDREN--VILT 1009
Query: 921 TKEVGQVALHPSSV---------------NANQNNFPLPYMVYSEMVKTNNI-NVYDSTN 964
+ +V HP+SV A P +++Y EM + + I N+ +
Sbjct: 1010 GPKEKKVRFHPTSVLSQPQYKKIPPANGQAAAIQALPTDWLIYDEMTRAHRIANIRCCSA 1069
Query: 965 ISEYALLLFGG-----------------NLIPSKTGEGIEM------------LGGYLHF 995
++ +L+F G + IP+ + + EM L +L+F
Sbjct: 1070 VTPVTVLVFCGPARLASNALQEPSSFRADGIPNDSSDS-EMEDRTTANLAALKLDEWLNF 1128
Query: 996 SASKTVLELIRKLRGELDKLLNRKIEDPRVDLSVEGKAVVSAVVELL 1042
L+ +LR + L R++ P S +A + A++ +L
Sbjct: 1129 KLEPEAASLLLQLRQKWHSLFLRRMRAPSKPWSQVDEATIRAIIAVL 1175
Score = 227 bits (579), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 138/378 (36%), Positives = 212/378 (56%), Gaps = 24/378 (6%)
Query: 125 LEQMKRGEEQEMIIKRKFSRADQQTLADMAHQLGLHFHAYNKG--KALAVSKVPLPMYRP 182
LE+ + G+++EM + ++ + ++ LGL + KG + L V K
Sbjct: 68 LERFRYGDQREMEFPSSLTSTERAFIHRLSQSLGLVSKSKGKGANRYLTVKK-------- 119
Query: 183 DLDERHGSTEKELQMSIETERRVGNLLNSSQGNVPVNDSGIESSEVARRPKLSVKVANTI 242
+ GS M+ + + S PV + E +E+ + + A
Sbjct: 120 ----KDGSETAHAMMTCNLTHNTKHAVRSLIQRFPVTNK--ERTELLPKTERGNVFAVEA 173
Query: 243 SPPQSDSAKERLNVILKERQEKLKSSDSGKAMLSFREKLPAFKMKAEFLKAVAENQVLVV 302
+ RLN + + K S+ SFR+ LP F+ + E +K + EN+V+++
Sbjct: 174 ENREMSKTSGRLNNGIPQVPVKRGESEFD----SFRQSLPVFEKQEEIVKIIKENKVVLI 229
Query: 303 SGETGCGKTTQLPQFILEEELSSLRGADCNIICTQPRRISAISVAARVSSERGENLGETV 362
GETG GKTTQ+PQF+L++ + G C I CTQPRR++AI+VA RV++ER E +G+T+
Sbjct: 230 VGETGSGKTTQIPQFLLDDCFKN--GIPCRIFCTQPRRLAAIAVAERVAAERRERIGQTI 287
Query: 363 GYQIRLESKRSAQTRLLFCTTGVLLRQLVE-DPDLSCVSHLLVDEIHERGMNEDFLLIIL 421
GYQIRLES+ S +T L FCT GVLLR L+ D LS V+H++VDE+HER DFLL L
Sbjct: 288 GYQIRLESRVSPKTLLTFCTNGVLLRTLMAGDSTLSTVTHVIVDEVHERDRFSDFLLTKL 347
Query: 422 RDLLPRRPDLRLILMSATINADLFSKYFGNAPTVHIPGLTFPVTDLFLEDVLEKTRYKMN 481
RDLL + P L+LIL SA ++ +LF +YFG+ P ++I G F V ++FLED+L T Y N
Sbjct: 348 RDLLQKHPTLKLILSSAALDVNLFIRYFGSCPVIYIQGRPFEVKEMFLEDILRTTGY-TN 406
Query: 482 SKLDSFQGNSRRSRRQDS 499
++ ++ +R +Q +
Sbjct: 407 KEMLKYKKEKQREEKQQT 424
>sp|Q9H6S0|YTDC2_HUMAN Probable ATP-dependent RNA helicase YTHDC2 OS=Homo sapiens GN=YTHDC2
PE=1 SV=2
Length = 1430
Score = 360 bits (924), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 213/587 (36%), Positives = 326/587 (55%), Gaps = 60/587 (10%)
Query: 513 IDSNYKNYRASTRASLEAWSA----EQIDLGLVESTIEYICRHEGDGAILVFLTGWNDIS 568
+ +N + A R L+A+ E++DL L+ + IC GA+L+FL G+++I
Sbjct: 577 VQTNGSDLSAEDRELLKAYHHSFDDEKVDLDLIMHLLYNICHSCDAGAVLIFLPGYDEIV 636
Query: 569 KLLDQIKVN--KFLGDPNKFLVLPLHGSMPTINQREIFDRPPPNKRKIVLATNIAESSIT 626
L D+I + +F +++ V LH +M T +Q+++ PP RKI+L+TNIAE+SIT
Sbjct: 637 GLRDRILFDDKRFADSTHRYQVFMLHSNMQTSDQKKVLKNPPAGVRKIILSTNIAETSIT 696
Query: 627 IDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRII 686
++DVV+V+D GK KE S+DALN + L WISKASA QR+GRAGR +PG+C++L+ R+
Sbjct: 697 VNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGRAGRCRPGICFRLFSRLR 756
Query: 687 HDAMLPYQLPEILRTPLQELCLHIKSLQLGT--VGSFLSKALQPPDPLAVQNAIELLKTI 744
ML +Q PE+LR PLQELCLH K L + FL KA +PP L V+NA+++LKTI
Sbjct: 757 FQNMLEFQTPELLRMPLQELCLHTKLLAPVNCPIADFLMKAPEPPPALIVRNAVQMLKTI 816
Query: 745 GALDDMENLTPLGRHLCTLPVDPNIGKMLLMGAIFQCLNPALTIAAALAHRNPFVLPV-- 802
A+D E+LT LG HL LPV+P++GKM+L + +CL+P LTIA LA+R+PFVLP
Sbjct: 817 DAMDTWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCLDPILTIACTLAYRDPFVLPTQA 876
Query: 803 NMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAKRNRRERDFCWENFLSPITLQMMEDM 862
+ ++ ++ F + SDH+ALL+AF ++ A+ + ER FC +NFLS T++++ M
Sbjct: 877 SQKRAAMLCRKRFTAGAFSDHMALLRAFQAWQKARSDGWERAFCEKNFLSQATMEIIIGM 936
Query: 863 RSQFLDLLSDIGFVDKSKGPSA--YNRYSHDLEMVCAILCAGLYPNVVQCKRKGKRAVFY 920
R+Q L L GFV G N S + +V A L AG+YPN+V R+ V
Sbjct: 937 RTQLLGQLRASGFVRARGGGDIRDVNTNSENWAVVKAALVAGMYPNLVHVDREN--LVLT 994
Query: 921 TKEVGQVALHPSSV---------------NANQNNFPLPYMVYSEMVKTNNI-NVYDSTN 964
+ +V HP+SV A P +++Y EM + + I N+ +
Sbjct: 995 GPKEKKVRFHPASVLSQPQYKKIPPANGQAAAIKALPTDWLIYDEMTRAHRIANIRCCSA 1054
Query: 965 ISEYALLLFGG-----------------NLIPSKTGEGIEM------------LGGYLHF 995
++ +L+F G + IP+ + + EM L +LHF
Sbjct: 1055 VTPVTILVFCGPARLASNALQEPSSFRVDGIPNDSSDS-EMEDKTTANLAALKLDEWLHF 1113
Query: 996 SASKTVLELIRKLRGELDKLLNRKIEDPRVDLSVEGKAVVSAVVELL 1042
+ L+ +LR + L R++ P S +A + A++ +L
Sbjct: 1114 TLEPEAASLLLQLRQKWHSLFLRRMRAPSKPWSQVDEATIRAIIAVL 1160
Score = 225 bits (573), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 139/372 (37%), Positives = 203/372 (54%), Gaps = 53/372 (14%)
Query: 125 LEQMKRGEEQEMIIKRKFSRADQQTLADMAHQLGLHFHAYNKG--KALAVSKVPLPMYRP 182
LE+ + G+++EM + ++ + ++ LGL + KG + L V K
Sbjct: 53 LERFRYGDQREMEFPSSLTSTERAFIHRLSQSLGLVSKSKGKGANRYLTVKK-------- 104
Query: 183 DLDERHGSTEKELQMSIETERRVGNLLNSSQGNVPVNDSGIESSEVARRPKLSVKVANTI 242
+ GS M+ + + S PV + E +E+ PK
Sbjct: 105 ----KDGSETAHAMMTCNLTHNTKHAVRSLIQRFPVTNK--ERTELL--PK--------- 147
Query: 243 SPPQSDSAKERLNVILKERQEKLKSSDSGK---------------AMLSFREKLPAFKMK 287
ER NV E + + S SG+ SFR+ LP F+ +
Sbjct: 148 --------TERGNVFAVEAENREMSKTSGRLNNGIPQIPVKRGESEFDSFRQSLPVFEKQ 199
Query: 288 AEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQPRRISAISVA 347
E +K + EN+V+++ GETG GKTTQ+PQF+L++ + G C I CTQPRR++AI+VA
Sbjct: 200 EEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCFKN--GIPCRIFCTQPRRLAAIAVA 257
Query: 348 ARVSSERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVE-DPDLSCVSHLLVDE 406
RV++ER E +G+T+GYQIRLES+ S +T L FCT GVLLR L+ D LS V+H++VDE
Sbjct: 258 ERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMAGDSTLSTVTHVIVDE 317
Query: 407 IHERGMNEDFLLIILRDLLPRRPDLRLILMSATINADLFSKYFGNAPTVHIPGLTFPVTD 466
+HER DFLL LRDLL + P L+LIL SA ++ +LF +YFG+ P ++I G F V +
Sbjct: 318 VHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPVIYIQGRPFEVKE 377
Query: 467 LFLEDVLEKTRY 478
+FLED+L T Y
Sbjct: 378 MFLEDILRTTGY 389
>sp|O43143|DHX15_HUMAN Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
OS=Homo sapiens GN=DHX15 PE=1 SV=2
Length = 795
Score = 343 bits (879), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 229/701 (32%), Positives = 358/701 (51%), Gaps = 86/701 (12%)
Query: 274 MLSFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNI 333
+L R +LP ++ K F + +Q V+ GETG GKTTQ+PQ+ +E + SL G +
Sbjct: 130 ILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEY-MRSLPGPKRGV 188
Query: 334 ICTQPRRISAISVAARVSSERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVED 393
CTQPRR++A+SVA RV+ E LG+ VGY IR E SA+T L + T G+LLR+ + D
Sbjct: 189 ACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMND 248
Query: 394 PDLSCVSHLLVDEIHERGMNEDFLLIILRDLLPRRPDLRLILMSATINADLFSKYFGNAP 453
P L +++DE HER + D L+ +L++++ +R DL++I+MSAT++A F YF N P
Sbjct: 249 PLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCP 308
Query: 454 TVHIPGLTFPVTDLFLEDVLEKTRYKMNSKLDSFQGNSRRSRRQDSKKDHLTALFEDVDI 513
+ IPG T H +F +
Sbjct: 309 LLTIPGRT-----------------------------------------HPVEIFYTPEP 327
Query: 514 DSNYKNYRASTRASLEAWSAEQIDLGLVESTIEYICRHEGDGAILVFLTGWNDISKLLDQ 573
+ +Y LEA I + + E E +G +L+FLTG +I + +
Sbjct: 328 ERDY----------LEAAIRTVIQIHMCE---------EEEGDLLLFLTGQEEIDEACKR 368
Query: 574 IK--VNKFLGDPNKFLVLPLHGSMPTINQREIFDRPPPNK------RKIVLATNIAESSI 625
IK V+ + ++PL+ ++P Q+ IF+ PPP K RK+V++TNIAE+S+
Sbjct: 369 IKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSL 428
Query: 626 TIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRI 685
TID VV+V+D G AK+ Y+ ++ LL + ISKASA QR GRAGR +PG C++LY
Sbjct: 429 TIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEK 488
Query: 686 IHDA-MLPYQLPEILRTPLQELCLHIKSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTI 744
+ M PEILR+ L + L +K L + + F + PP P + A+ELL +
Sbjct: 489 AYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHF--DFMDPPAPETLMRALELLNYL 546
Query: 745 GALDDMENLTPLGRHLCTLPVDPNIGKMLLMGAIFQCLNPALTIAAALAHRNPFVLPVNM 804
AL+D +LT LG + P+DP + KM++ + C N L+I A L+ FV P
Sbjct: 547 AALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQCFVRPTEA 606
Query: 805 QKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAKRNRRERDFCWENFLSPITLQMMEDMRS 864
+K DEAK FA DH+ LL + + K+N +C++NF++ +L +++R
Sbjct: 607 KKAADEAKMRFAHID-GDHLTLLNVYHAF---KQNHESVQWCYDNFINYRSLMSADNVRQ 662
Query: 865 QFLDLLSDIGFVDKSKGPSAYNRYSHDLEMVCAILCAGLYPNVVQCKRKGKRAVFYTKEV 924
Q ++ +S ++ + Y + + L G + V +R G +V
Sbjct: 663 QLSRIMDRFNLPRRSTDFTSRDYYIN----IRKALVTGYFMQVAHLERTGHYLTVKDNQV 718
Query: 925 GQVALHPSSVNANQNNFPLPYMVYSEMVKTNNINVYDSTNI 965
V LHPS+V ++ +++Y+E V T + T+I
Sbjct: 719 --VQLHPSTVLDHKPE----WVLYNEFVLTTKNYIRTCTDI 753
>sp|Q5RAZ4|DHX15_PONAB Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
OS=Pongo abelii GN=DHX15 PE=2 SV=2
Length = 795
Score = 343 bits (879), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 229/701 (32%), Positives = 358/701 (51%), Gaps = 86/701 (12%)
Query: 274 MLSFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNI 333
+L R +LP ++ K F + +Q V+ GETG GKTTQ+PQ+ +E + SL G +
Sbjct: 130 ILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEY-MRSLPGPKRGV 188
Query: 334 ICTQPRRISAISVAARVSSERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVED 393
CTQPRR++A+SVA RV+ E LG+ VGY IR E SA+T L + T G+LLR+ + D
Sbjct: 189 ACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMND 248
Query: 394 PDLSCVSHLLVDEIHERGMNEDFLLIILRDLLPRRPDLRLILMSATINADLFSKYFGNAP 453
P L +++DE HER + D L+ +L++++ +R DL++I+MSAT++A F YF N P
Sbjct: 249 PLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCP 308
Query: 454 TVHIPGLTFPVTDLFLEDVLEKTRYKMNSKLDSFQGNSRRSRRQDSKKDHLTALFEDVDI 513
+ IPG T H +F +
Sbjct: 309 LLTIPGRT-----------------------------------------HPVEIFYTPEP 327
Query: 514 DSNYKNYRASTRASLEAWSAEQIDLGLVESTIEYICRHEGDGAILVFLTGWNDISKLLDQ 573
+ +Y LEA I + + E E +G +L+FLTG +I + +
Sbjct: 328 ERDY----------LEAAIRTVIQIHMCE---------EEEGDLLLFLTGQEEIDEACKR 368
Query: 574 IK--VNKFLGDPNKFLVLPLHGSMPTINQREIFDRPPPNK------RKIVLATNIAESSI 625
IK V+ + ++PL+ ++P Q+ IF+ PPP K RK+V++TNIAE+S+
Sbjct: 369 IKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSL 428
Query: 626 TIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRI 685
TID VV+V+D G AK+ Y+ ++ LL + ISKASA QR GRAGR +PG C++LY
Sbjct: 429 TIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEK 488
Query: 686 IHDA-MLPYQLPEILRTPLQELCLHIKSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTI 744
+ M PEILR+ L + L +K L + + F + PP P + A+ELL +
Sbjct: 489 AYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHF--DFMDPPAPETLMRALELLNYL 546
Query: 745 GALDDMENLTPLGRHLCTLPVDPNIGKMLLMGAIFQCLNPALTIAAALAHRNPFVLPVNM 804
AL+D +LT LG + P+DP + KM++ + C N L+I A L+ FV P
Sbjct: 547 AALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQCFVRPTEA 606
Query: 805 QKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAKRNRRERDFCWENFLSPITLQMMEDMRS 864
+K DEAK FA DH+ LL + + K+N +C++NF++ +L +++R
Sbjct: 607 KKAADEAKMRFAHID-GDHLTLLNVYHAF---KQNHESVQWCYDNFINYRSLMSADNVRQ 662
Query: 865 QFLDLLSDIGFVDKSKGPSAYNRYSHDLEMVCAILCAGLYPNVVQCKRKGKRAVFYTKEV 924
Q ++ +S ++ + Y + + L G + V +R G +V
Sbjct: 663 QLSRIMDRFNLPRRSTDFTSRDYYIN----IRKALVTGYFMQVAHLERTGHYLTVKDNQV 718
Query: 925 GQVALHPSSVNANQNNFPLPYMVYSEMVKTNNINVYDSTNI 965
V LHPS+V ++ +++Y+E V T + T+I
Sbjct: 719 --VQLHPSTVLDHKPE----WVLYNEFVLTTKNYIRTCTDI 753
>sp|O35286|DHX15_MOUSE Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
OS=Mus musculus GN=Dhx15 PE=2 SV=2
Length = 795
Score = 343 bits (879), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 229/701 (32%), Positives = 358/701 (51%), Gaps = 86/701 (12%)
Query: 274 MLSFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNI 333
+L R +LP ++ K F + +Q V+ GETG GKTTQ+PQ+ +E + SL G +
Sbjct: 130 ILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEY-MRSLPGPKRGV 188
Query: 334 ICTQPRRISAISVAARVSSERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVED 393
CTQPRR++A+SVA RV+ E LG+ VGY IR E SA+T L + T G+LLR+ + D
Sbjct: 189 ACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMND 248
Query: 394 PDLSCVSHLLVDEIHERGMNEDFLLIILRDLLPRRPDLRLILMSATINADLFSKYFGNAP 453
P L +++DE HER + D L+ +L++++ +R DL++I+MSAT++A F YF N P
Sbjct: 249 PLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCP 308
Query: 454 TVHIPGLTFPVTDLFLEDVLEKTRYKMNSKLDSFQGNSRRSRRQDSKKDHLTALFEDVDI 513
+ IPG T H +F +
Sbjct: 309 LLTIPGRT-----------------------------------------HPVEIFYTPEP 327
Query: 514 DSNYKNYRASTRASLEAWSAEQIDLGLVESTIEYICRHEGDGAILVFLTGWNDISKLLDQ 573
+ +Y LEA I + + E E +G +L+FLTG +I + +
Sbjct: 328 ERDY----------LEAAIRTVIQIHMCE---------EEEGDLLLFLTGQEEIDEACKR 368
Query: 574 IK--VNKFLGDPNKFLVLPLHGSMPTINQREIFDRPPPNK------RKIVLATNIAESSI 625
IK V+ + ++PL+ ++P Q+ IF+ PPP K RK+V++TNIAE+S+
Sbjct: 369 IKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSL 428
Query: 626 TIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPGVCYKLYP-R 684
TID VV+V+D G AK+ Y+ ++ LL + ISKASA QR GRAGR +PG C++LY +
Sbjct: 429 TIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEK 488
Query: 685 IIHDAMLPYQLPEILRTPLQELCLHIKSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTI 744
M PEILR+ L + L +K L + + F + PP P + A+ELL +
Sbjct: 489 AYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHF--DFMDPPAPETLMRALELLNYL 546
Query: 745 GALDDMENLTPLGRHLCTLPVDPNIGKMLLMGAIFQCLNPALTIAAALAHRNPFVLPVNM 804
AL+D +LT LG + P+DP + KM++ + C N L+I A L+ FV P
Sbjct: 547 AALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQCFVRPTEA 606
Query: 805 QKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAKRNRRERDFCWENFLSPITLQMMEDMRS 864
+K DEAK FA DH+ LL + + K+N +C++NF++ +L +++R
Sbjct: 607 KKAADEAKMRFAHID-GDHLTLLNVYHAF---KQNHESVQWCYDNFINYRSLMSADNVRQ 662
Query: 865 QFLDLLSDIGFVDKSKGPSAYNRYSHDLEMVCAILCAGLYPNVVQCKRKGKRAVFYTKEV 924
Q ++ +S ++ + Y + + L G + V +R G +V
Sbjct: 663 QLSRIMDRFNLPRRSTDFTSRDYYIN----IRKALVTGYFMQVAHLERTGHYLTVKDNQV 718
Query: 925 GQVALHPSSVNANQNNFPLPYMVYSEMVKTNNINVYDSTNI 965
V LHPS+V ++ +++Y+E V T + T+I
Sbjct: 719 --VQLHPSTVLDHKPE----WVLYNEFVLTTKNYIRTCTDI 753
>sp|P24384|PRP22_YEAST Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP22
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=PRP22 PE=1 SV=1
Length = 1145
Score = 338 bits (868), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 234/700 (33%), Positives = 355/700 (50%), Gaps = 93/700 (13%)
Query: 278 REKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQ 337
R+ LP + M++E ++AV +NQ LV+ GETG GKTTQ+ Q++ EE S+ I CTQ
Sbjct: 480 RQTLPVYAMRSELIQAVRDNQFLVIVGETGSGKTTQITQYLDEEGFSNY----GMIGCTQ 535
Query: 338 PRRISAISVAARVSSERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVEDPDLS 397
PRR++A+SVA RV+ E G +G VGY IR E TR+ + T G+L R+ + DP++S
Sbjct: 536 PRRVAAVSVAKRVAEEVGCKVGHDVGYTIRFEDVTGPDTRIKYMTDGMLQREALLDPEMS 595
Query: 398 CVSHLLVDEIHERGMNEDFLLIILRDLLPRRPDLRLILMSATINADLFSKYFGNAPTVHI 457
S +++DE HER + D L +L+ +RP+L++I+ SAT+N+ FS+YF N P ++I
Sbjct: 596 KYSVIMLDEAHERTVATDVLFALLKKAAIKRPELKVIVTSATLNSAKFSEYFLNCPIINI 655
Query: 458 PGLTFPVTDLFLEDVLEKTRYKMNSKLDSFQGNSRRSRRQDSKKDHLTALFEDVDIDSNY 517
PG TFPV L+ Q + D++ A + V
Sbjct: 656 PGKTFPVEVLY---------------------------SQTPQMDYIEAALDCV------ 682
Query: 518 KNYRASTRASLEAWSAEQIDLGLVESTIEYICRHEGDGAILVFLTGWNDISK----LLDQ 573
ID+ + E G G ILVFLTG +I L D+
Sbjct: 683 ------------------IDIHINE----------GPGDILVFLTGQEEIDSCCEILYDR 714
Query: 574 IKVNKFLGDP-NKFLVLPLHGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVY 632
+K LGD + L+LP++ ++P+ Q +IF+ P RK+V ATNIAE+SITID + Y
Sbjct: 715 VKT---LGDSIGELLILPVYSALPSEIQSKIFEPTPKGSRKVVFATNIAETSITIDGIYY 771
Query: 633 VVDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPGVCYKLYPR-IIHDAML 691
VVD G AK Y+A + L+ S IS+A A+QR+GRAGR PG CY+LY ++ ML
Sbjct: 772 VVDPGFAKINIYNARAGIEQLIVSPISQAQANQRKGRAGRTGPGKCYRLYTESAFYNEML 831
Query: 692 PYQLPEILRTPLQELCLHIKSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDME 751
+PEI R L L +K++ + + F + PP + NA+ L + +LDD
Sbjct: 832 ENTVPEIQRQNLSHTILMLKAMGINDLLKF--DFMDPPPKNLMLNALTELYHLQSLDDEG 889
Query: 752 NLTPLGRHLCTLPVDPNIGKMLLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQKEVDEA 811
LT LG+ + P+DP + + LL QC + +TI + L+ +N F P + Q E D
Sbjct: 890 KLTNLGKEMSLFPMDPTLSRSLLSSVDNQCSDEIVTIISMLSVQNVFYRPKDRQLEADSK 949
Query: 812 KRSFAGDSCSDHIALLKAFDGYKDAKRNRRERDFCWENFLSPITLQMMEDMRSQFLDLLS 871
K F DH+ LL + ++ A + + +C NFL L+ D++SQ +
Sbjct: 950 KAKFH-HPYGDHLTLLNVYTRWQQANYSEQ---YCKTNFLHFRHLKRARDVKSQISMIFK 1005
Query: 872 DIGFVDKSKGPSAYNRYSHDLEMVCAILCAGLYPNVVQCKRKGKRAVFYTKEVGQVALHP 931
IG K S ++ D +++ +G + N KR + +V +HP
Sbjct: 1006 KIGL----KLISCHS----DPDLIRKTFVSGFFMNA--AKRDSQVGYKTINGGTEVGIHP 1055
Query: 932 SSVNANQNNFPLPYMVYSEMVKTNNINVYDSTNISEYALL 971
SS + Y++Y +V T+ + T+I LL
Sbjct: 1056 SSSLYGKE---YEYVMYHSIVLTSREYMSQVTSIEPQWLL 1092
>sp|Q20875|DHX15_CAEEL Putative pre-mRNA-splicing factor ATP-dependent RNA helicase
F56D2.6 OS=Caenorhabditis elegans GN=F56D2.6 PE=2 SV=1
Length = 739
Score = 338 bits (866), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 228/712 (32%), Positives = 362/712 (50%), Gaps = 89/712 (12%)
Query: 273 AMLSFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCN 332
A+ R +LP ++ K +F++ + NQ + + GETG GKTTQ+PQ+ +E +G
Sbjct: 68 AIWEKRSQLPVWEYKEKFMELLRNNQCITLVGETGSGKTTQIPQWAVEFMKQQQQGQPPG 127
Query: 333 ----IICTQPRRISAISVAARVSSERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLR 388
+ CTQPRR++A+SVA RV+ E LG+ VGY IR E S +T L +CT G+LLR
Sbjct: 128 QARLVACTQPRRVAAMSVATRVAEEMDVVLGQEVGYSIRFEDCISERTVLKYCTDGMLLR 187
Query: 389 QLVEDPDLSCVSHLLVDEIHERGMNEDFLLIILRDLLPRRPDLRLILMSATINADLFSKY 448
+ + P L L++DE HER + D L+ ++++++ R D+++++MSAT++A F +Y
Sbjct: 188 EAMNSPLLDKYKVLILDEAHERTLATDILMGLIKEIVRNRADIKVVIMSATLDAGKFQRY 247
Query: 449 FGNAPTVHIPGLTFPVTDLFLEDVLEKTRYKMNSKLDSFQGNSRRSRRQDSKKDHLTALF 508
F + P + +PG TFPV F + ++KD+L A
Sbjct: 248 FEDCPLLSVPGRTFPVEIFFTPN---------------------------AEKDYLEAAI 280
Query: 509 EDVDIDSNYKNYRASTRASLEAWSAEQIDLGLVESTIEYICRHEGDGAILVFLTGWNDIS 568
V I + +VE E +G IL+FLTG +I
Sbjct: 281 RTV------------------------IQIHMVE---------EVEGDILLFLTGQEEIE 307
Query: 569 KLLDQI--KVNKFLGDPNKFLVLPLHGSMPTINQREIFDRPPPNK------RKIVLATNI 620
+ +I ++ D +PL+ ++P Q+ IF+ PPN+ RK V++TNI
Sbjct: 308 EACKRIDREIQALGADAGALSCIPLYSTLPPAAQQRIFEPAPPNRPNGAISRKCVISTNI 367
Query: 621 AESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPGVCYK 680
AE+S+TID VV+V+D G +K+ Y+ ++ LL ISKASA QR GRAGR +PG C++
Sbjct: 368 AETSLTIDGVVFVIDPGFSKQKVYNPRIRVESLLVCPISKASAMQRAGRAGRTKPGKCFR 427
Query: 681 LYPRIIHDAMLPYQ-LPEILRTPLQELCLHIKSLQLGTVGSFLSKALQPPDPLAVQNAIE 739
LY + + + Q PEILR+ L + L +K +LGT + PP P + A+E
Sbjct: 428 LYTETAYGSEMQDQTYPEILRSNLGSVVLQLK--KLGTEDLVHFDFMDPPAPETLMRALE 485
Query: 740 LLKTIGALDDMENLTPLGRHLCTLPVDPNIGKMLLMGAIFQCLNPALTIAAALAHRNPFV 799
LL + A++D LT LG + P+DP + KML+ C N L+I A L+ +V
Sbjct: 486 LLNYLQAINDDGELTELGSLMAEFPLDPQLAKMLITSTELNCSNEILSITAMLSVPQCWV 545
Query: 800 LPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAKRNRRERDFCWENFLSPITLQMM 859
P M+ E DEAK FA DH+ LL + + K+N+ + +C++NF++ T++
Sbjct: 546 RPNEMRTEADEAKARFAHID-GDHLTLLNVYHSF---KQNQEDPQWCYDNFINYRTMKTA 601
Query: 860 EDMRSQFLDLLSDIGFVDKSKGPSAYNRYSHDLEMVCAILCAGLYPNVVQCKRKGKRAVF 919
+ +R+Q ++ S + + Y + + L AG + V +R G
Sbjct: 602 DTVRTQLSRVMDKYNLRRVSTDFKSRDYYLN----IRKALVAGFFMQVAHLERSGHYVT- 656
Query: 920 YTKEVGQVALHPSSVNANQNNFPLPYMVYSEMVKTNNINVYDSTNISEYALL 971
K+ V LHPS+V ++ + L Y+E V T + T++ LL
Sbjct: 657 -VKDNQLVNLHPSTVLDHKPEWAL----YNEFVLTTKNFIRTVTDVRPEWLL 703
>sp|P34498|MOG1_CAEEL Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-1
OS=Caenorhabditis elegans GN=mog-1 PE=1 SV=2
Length = 1131
Score = 338 bits (866), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 232/689 (33%), Positives = 352/689 (51%), Gaps = 91/689 (13%)
Query: 272 KAMLSFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADC 331
K++ RE LP F + + + + EN V+++ GETG GKTTQL Q++LE+ G
Sbjct: 432 KSIKQQREYLPVFACRQKMMNVIRENNVVIIVGETGSGKTTQLAQYLLEDGF----GDSG 487
Query: 332 NIICTQPRRISAISVAARVSSERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLV 391
I CTQPRR++A+SVA RV+ E G +LG+ VGY IR E S +T + + T G+LLR+ +
Sbjct: 488 LIGCTQPRRVAAMSVARRVADEMGVDLGQDVGYAIRFEDCTSEKTIIKYMTDGILLRECL 547
Query: 392 EDPDLSCVSHLLVDEIHERGMNEDFLLIILRDLLPRRPDLRLILMSATINADLFSKYF-G 450
D L S +++DE HER +N D L +LR+++ +R DL+LI+ SAT++AD F+ +F G
Sbjct: 548 GDGSLDQYSAIIMDEAHERSLNTDVLFGLLREVIAKRADLKLIVTSATMDADKFADFFGG 607
Query: 451 NAPTVHIPGLTFPVTDLFLEDVLEKTRYKMNSKLDSFQGNSRRSRRQDSKKDHLTALFED 510
N PT IPG TFPV +LF H ED
Sbjct: 608 NCPTFTIPGRTFPV-ELF----------------------------------HARTPVED 632
Query: 511 VDIDSNYKNYRASTRASLEAWSAEQIDLGLVESTIEYICRHEGDGAILVFLTGWNDISKL 570
+D+ K A I LG ++ I L+F+ G DI
Sbjct: 633 Y-VDAAVKQ-------------AVTIHLGGMDGDI------------LIFMPGQEDIECT 666
Query: 571 LDQIKVNKFLGDPNK---FLVLPLHGSMPTINQREIFDRPPPNKRKIVLATNIAESSITI 627
+ IK LG+ ++ VLP++ +P+ Q +IF R P RK ++ATNIAE+S+T+
Sbjct: 667 CEMIKEK--LGELDEAPPLAVLPIYSQLPSDLQAKIFQRAPGGMRKAIVATNIAETSLTV 724
Query: 628 DDVVYVVDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPGVCYKLYP-RII 686
D +++V+D G K Y+ + L +S+ASA+QR GRAGR PG CY+LY R
Sbjct: 725 DGILFVIDPGFCKMKVYNPRIGMDALSIFPVSQASANQRTGRAGRTGPGQCYRLYTERQF 784
Query: 687 HDAMLPYQLPEILRTPLQELCLHIKSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGA 746
D +L +PEI RT L + L +KSL + + F P D + N++ L T+GA
Sbjct: 785 KDELLKSTVPEIQRTNLANVVLLLKSLGVDDLLKFHFMDAPPQDNML--NSMYQLWTLGA 842
Query: 747 LDDMENLTPLGRHLCTLPVDPNIGKMLLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQK 806
LD+ LTP+GR + P+DP + KML+M A C + LTI + L+ F P ++
Sbjct: 843 LDNTGQLTPMGRKMVEFPLDPTLSKMLIMSAEMGCSDEVLTIVSMLSVPAIFFRPKGREE 902
Query: 807 EVDEAKRSFAGDSCSDHIALLKAFDGYKDAKRNRRERDFCWENFLSPITLQMMEDMRSQF 866
E D K F SDH+ L + ++ K + + +C +N+L L+ + ++R+Q
Sbjct: 903 EADAKKEKFQVPE-SDHLTFLNVYIQWRTHKYSAK---WCADNYLHVKALKKVREVRAQL 958
Query: 867 LDLLSDIGFVDKSKGPSAYNRYSHDLEMVCAILCAGLYPNVVQCKRKGKRAVFYTKEVG- 925
+++ D+ K P N D+ C +C+ + N + K G+ + G
Sbjct: 959 KEIMQDL------KLPLISNGSEWDIVRKC--ICSAYFHNAARLKGIGE---YVNVRTGI 1007
Query: 926 QVALHPSSVNANQNNFPLPYMVYSEMVKT 954
LHP+S P Y+VY E++ T
Sbjct: 1008 PCFLHPTSALFGMGFMP-DYVVYHELIMT 1035
>sp|Q54F05|DHX8_DICDI ATP-dependent RNA helicase dhx8 OS=Dictyostelium discoideum GN=dhx8
PE=3 SV=1
Length = 1160
Score = 336 bits (862), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 223/689 (32%), Positives = 358/689 (51%), Gaps = 89/689 (12%)
Query: 270 SGKAMLSFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGA 329
+ +++ RE LP F ++ FL+AV+E+Q+LVV GETG GKTTQ+ Q++ E + G
Sbjct: 497 TSRSIKEQRESLPIFPLREAFLQAVSEHQLLVVIGETGSGKTTQMAQYLAE----AGYGT 552
Query: 330 DCNIICTQPRRISAISVAARVSSERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQ 389
I CTQPRR++A+SV+ RV+ E G LG+ VGY IR E S +T + F T G+LLR+
Sbjct: 553 RGKIGCTQPRRVAAMSVSKRVAEEFGCQLGQEVGYAIRFEDCTSPETIIKFMTDGILLRE 612
Query: 390 LVEDPDLSCVSHLLVDEIHERGMNEDFLLIILRDLLPRRPDLRLILMSATINADLFSKYF 449
+ DP+LS S +++DE HER ++ D L +L+ L RRP+L++++ SAT+ A+ FS
Sbjct: 613 CLLDPNLSAYSVIILDEAHERTISTDVLFGLLKQALQRRPELKVLITSATLEAEKFS--- 669
Query: 450 GNAPTVHIPGLTFPVTDLFLEDVLEKTRYKMNSKLDSFQGNSRRSRRQDSKKDHLTALFE 509
+Y MN++L G +
Sbjct: 670 ---------------------------KYFMNAQLFIIPGRT------------------ 684
Query: 510 DVDIDSNYKNYRASTRASLEAWSAEQIDLGLVESTIEYICRHEGDGAILVFLTGWNDISK 569
+D Y + A+ +D L+ T+ I E G IL+FLTG +I
Sbjct: 685 -FPVDIRY----------TKDPEADYLDASLI--TVMQIHLSEPPGDILLFLTGQEEIDA 731
Query: 570 LLDQI--KVNKFLGDPNKFLVLPLHGSMPTINQREIFDRPPPNKRKIVLATNIAESSITI 627
+ ++ + ++LP++ ++P+ Q +IF+ PP RK+V+ATNIAE+S+TI
Sbjct: 732 ACQILYERMKSLGSNVPDLIILPVYSALPSEMQTKIFEPAPPGSRKVVIATNIAETSLTI 791
Query: 628 DDVVYVVDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPGVCYKLYPR-II 686
D + YV+D G +K+ ++ N + L+ + IS+A+A QR GRAGR PG CY+LY
Sbjct: 792 DGIYYVIDPGFSKQKCFNPKNGMDSLVVAPISQAAARQRSGRAGRTGPGKCYRLYTESAF 851
Query: 687 HDAMLPYQLPEILRTPLQELCLHIKSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGA 746
+ ML +PEI RT L L +K++ + + +F + PP + +A+E L ++GA
Sbjct: 852 KNEMLASSIPEIQRTNLGNTVLTMKAMGINDLLNF--DFMDPPPVQTLVSAMEQLYSLGA 909
Query: 747 LDDMENLTPLGRHLCTLPVDPNIGKMLLMGAIFQCLNPALTIAAALAHRNPFVLPVNMQK 806
LD+ LT LGR + P+DP + KML+ C + LT+ A L+ +N F P Q
Sbjct: 910 LDEEGLLTRLGRKMAEFPLDPQLSKMLIASVDLGCSDEILTVVAMLSVQNVFYRPKEKQA 969
Query: 807 EVDEAKRSFAGDSCSDHIALLKAFDGYKDAKRNRRERDFCWENFLSPITLQMMEDMRSQF 866
D+ K F DH+ LL ++ +K++K + +C+ENF+ +L+ +D+R Q
Sbjct: 970 LADQKKAKFFQPE-GDHLTLLNVYESWKNSKFS---NPWCFENFVQARSLRRAQDVRKQL 1025
Query: 867 LDLLSDIGFVDKSKGPSAYNRYSHDLEMVCAILCAGLYPNVVQCKRKGKRAVFYTKEVGQ 926
+ ++ S G + + +C+G + N +K + T GQ
Sbjct: 1026 ITIMDRYKLDIISAG--------RNYTKIQKAICSGFFAN---ASKKDPNEGYKTLVEGQ 1074
Query: 927 -VALHPSSVNANQNNFPLPYMVYSEMVKT 954
V +HPSS N+N +++Y E+V T
Sbjct: 1075 PVYIHPSSTLFNRNP---DWVIYHELVMT 1100
>sp|Q9BKQ8|DHX35_CAEEL Probable ATP-dependent RNA helicase DHX35 homolog OS=Caenorhabditis
elegans GN=Y67D2.6 PE=3 SV=1
Length = 732
Score = 319 bits (818), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 201/614 (32%), Positives = 319/614 (51%), Gaps = 65/614 (10%)
Query: 262 QEKLKSSDSGKAMLSFRE---KLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFI 318
+E+LK ++ A L+ ++ +LP FK + L + +++ GETGCGK+TQ+PQF+
Sbjct: 55 EEQLKVHNNPYASLNIQQQRIRLPIFKNRGHILYMCERYRTIIIVGETGCGKSTQVPQFL 114
Query: 319 LEEELSSLRGADCNIICTQPRRISAISVAARVSSERGENLGETVGYQIRLESKRSAQTRL 378
LE + I+ TQPRR++ +++A RV+ E+ LG VGY +R + T++
Sbjct: 115 LE---AGWAADGRQIVITQPRRVAVVTLATRVAEEKDCILGHDVGYTVRFDDVSDKDTKV 171
Query: 379 LFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFLLIILRDLLPRRPDLRLILMSA 438
F T G+LLR+++ DP LS S +++DE HER N D LL +LR ++ R DLR+I+ SA
Sbjct: 172 KFMTDGLLLREILADPLLSKYSIIMIDEAHERSCNTDILLGLLRKIIQIRNDLRIIVSSA 231
Query: 439 TINADLFSKYFGNAPTVHIPGLTFPVTDLFLEDVLEKTRYKMNSKLDSFQGNSRRSRRQD 498
T++A+LF +F T NS D+ S R
Sbjct: 232 TLDAELFKDFFEMNET-------------------------GNSDKDTAGIISVEGRTHP 266
Query: 499 SKKDHLTALFEDVDIDSNYKNYRASTRASLEAWSAEQIDLGLVESTIEYICRHEGDGAIL 558
H T+ S+ + +D T+ I +HE G IL
Sbjct: 267 VAVHH--------------------TKTSVPDYCQSAVD------TVINIHKHENPGDIL 300
Query: 559 VFLTGWNDISKLLDQIK-VNKFLGDPNKFLVLPLHGSMPTINQREIFDRPPPNKRKIVLA 617
VFLTG +++ + ++++ + L + ++ V+P +G++P Q + FD P RK+V+A
Sbjct: 301 VFLTGQDEVEDVCEKLRELAGNLKNCDRLWVVPCYGALPAREQMKAFDSTPHGTRKVVVA 360
Query: 618 TNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPGV 677
TNIAE+SITI + YV+D G K + A N + L+ +SKASA QR GRAGR++PG
Sbjct: 361 TNIAEASITIPGICYVIDTGYVKLRAQHAANGVETLMRVTVSKASAEQRAGRAGRIRPGK 420
Query: 678 CYKLYPRIIHDAMLPYQLPEILRTPLQELCLHIKSLQLGTVGSFLSKALQPPDPLAVQNA 737
CY+LYP + +PEI R + L +K+L + V F L PP A+ N
Sbjct: 421 CYRLYPESEFERFAEGTVPEIQRCQMASTILQLKALGVQNVHRF--HYLSPPPSWAMING 478
Query: 738 IELLKTIGALDDMENLT-PLGRHLCTLPVDPNIGKMLLMGAIFQCLNPALTIAAALAHRN 796
+ELL +GA+D+ LT PLG + P+ P K LL A F C +TI A + ++
Sbjct: 479 LELLYALGAIDETSQLTSPLGLQMAEFPLPPMHSKCLLKSAEFGCSTEMVTIVAMMQIQD 538
Query: 797 PFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAKRNRRERDFCWENFLSPITL 856
F+ P + + D ++ FA + DH+ +L F + + N R + +C ++F++ L
Sbjct: 539 VFITPYRQRHQADVIRKKFAVEE-GDHMTMLNVFTKFVE---NGRSKKWCSDHFVNYRGL 594
Query: 857 QMMEDMRSQFLDLL 870
+++RSQ + LL
Sbjct: 595 MRADNVRSQLVRLL 608
>sp|Q296Q5|SPNE_DROPS Probable ATP-dependent RNA helicase spindle-E OS=Drosophila
pseudoobscura pseudoobscura GN=spn-E PE=3 SV=2
Length = 1433
Score = 317 bits (813), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 224/655 (34%), Positives = 338/655 (51%), Gaps = 53/655 (8%)
Query: 279 EKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQP 338
+ LP + + E + A+ EN V++V GETGCGKTTQ+PQ+IL+E S + CNI+ TQP
Sbjct: 114 KSLPIYAKREEIINAINENPVVIVKGETGCGKTTQVPQYILDEGFKSKQY--CNIVVTQP 171
Query: 339 RRISAISVAARVSSERGENLGETVGYQIRLESK--RSAQTRLLFCTTGVLLRQLVEDPDL 396
RRI+AIS+A RV ER G GYQ+ L + R A TRLL+CTTGVLL LV + L
Sbjct: 172 RRIAAISIANRVCQERQWQRGTVCGYQVGLHRQLERFADTRLLYCTTGVLLNILVNNKTL 231
Query: 397 SCVSHLLVDEIHERGMNEDFLLIILRDLLPRRP-DLRLILMSATINADLFSKYFGNAPTV 455
+ +H+++DE+HERG DFLLI++R LL +++ILMSATIN S YF N +
Sbjct: 232 THYTHIVLDEVHERGQEMDFLLIVIRRLLATNSRHVKVILMSATINPRELSDYFANERSA 291
Query: 456 HIPGLTFPVTDLFLEDVLEKTRYKMNSKLDSFQGNSRRSRRQDSKKDHLTALFEDVDIDS 515
PV D Y N ++ + + ++ + ++ DI+S
Sbjct: 292 P------PVID---------ASYGRNFTVEKYYRDQLQTINWEGHQE---------DINS 327
Query: 516 ---NYKNYRASTRASLEAWSAEQIDLGLVESTIEYICRHEGDGAILVFLTGWNDISKLLD 572
+ YR++ + L + E+ + ST + + +G+IL+FL G +I+ + D
Sbjct: 328 PGITQEGYRSAIKTILVIDNMERNE----RSTGKSYNQSLREGSILIFLPGVGEINNMSD 383
Query: 573 QIKVNKFLGDPNKFLVLPLHGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVY 632
+K KF ++ H M + +QREIF PP RKI++ATN+AESSIT+ DV Y
Sbjct: 384 MLKDMANHDSIMKFNMVRCHSLMSSDDQREIFQPSPPGYRKIIMATNVAESSITVPDVSY 443
Query: 633 VVDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLP 692
++D K D + L W SK + QR GR GR++ G Y++ + + L
Sbjct: 444 IIDFCLEKVLFTDTFTNFSSLRLVWASKTNCRQRAGRVGRLRNGRVYRMVTKSFYQRELS 503
Query: 693 -YQLPEILRTPLQELCLHIKSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGAL---- 747
Y +PE+LR+PLQ L K L++GT L+ AL PP+ + N I LLK +GAL
Sbjct: 504 EYSVPEMLRSPLQNCVLKAKELKMGTPVEMLALALSPPNLSDICNTILLLKEVGALFPTV 563
Query: 748 ----DDME-NLTPLGRHLCTLPVDPNIGKMLLMGAIFQCLNPALTIAAALAHRNPFVLPV 802
D + ++T G + LP+D + +++++G IF L+ A+ IAA L R FV
Sbjct: 564 DGTYDPCDGDITYWGTIMSKLPLDTRLSRLIILGYIFNLLDEAIIIAAGLTVRGIFVDST 623
Query: 803 NMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAKRNRRERD--FCWENFLSPITLQMME 860
+ + FA S SD + + + + Y + N ++D W ++L+ +
Sbjct: 624 RLGSDNYWMHYVFADGSGSDLVGIWRVYLTYLNMCENGLQKDASIQWAKRFH-LSLRALS 682
Query: 861 DMRSQFLDLLSDIGFVDKSKGPSAYNRYSHDLE---MVCAILCAGLYPN-VVQCK 911
+M LDL + +R S D E M+ I+ YPN VQ K
Sbjct: 683 EMNLLVLDLRLRCEKLSLLPLNFPISRISDDSEKAIMLKVIIAGSFYPNYFVQSK 737
>sp|B0XDC4|SPNE_CULQU Probable ATP-dependent RNA helicase spindle-E OS=Culex
quinquefasciatus GN=spn-E PE=3 SV=1
Length = 1396
Score = 316 bits (810), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 225/660 (34%), Positives = 348/660 (52%), Gaps = 74/660 (11%)
Query: 278 REKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQ 337
+ LP K E L + N V+V+ G TGCGKTTQ+PQ++LEE R CNII TQ
Sbjct: 55 KNDLPINWNKPEILDKIRSNAVVVLQGATGCGKTTQVPQYLLEEAFE--RKEYCNIIVTQ 112
Query: 338 PRRISAISVAARVSSERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVEDPDLS 397
PR+I+AIS+A RV+ ER +LG VGY++ L+ + + TRLL+ TTGVLL+ L+ ++
Sbjct: 113 PRKIAAISIARRVAQERKCDLGTLVGYKVGLKEQHNEDTRLLYVTTGVLLQSLINSKTMA 172
Query: 398 CVSHLLVDEIHERGMNEDFLLIILRDLLPRRPD-LRLILMSATINADLFSKYFG------ 450
+H+++DE+HER ++ DFLLI++R LL ++ILMSATI+A FS+YF
Sbjct: 173 TYTHVILDEVHEREVDMDFLLIVVRRLLSTNSKKTKVILMSATIDAKGFSEYFKIPKKSG 232
Query: 451 --NAPTVHIPGLTFPVTDLFLEDVLEKTRYKMNSKLDSFQGNSRRSRRQDSKKDHLTALF 508
+AP + + V F D LEK K++ ++D +
Sbjct: 233 YLSAPVISVERPRLHVVQEFYFDDLEK--LKVDFQID----------------------Y 268
Query: 509 EDVDIDSNYKNYRASTRASLEAWSAEQIDLGLVESTIEYICRHEGDGAILVFLTGWNDIS 568
E I N A + ++ ++EY +I++FL G N+I
Sbjct: 269 EAPGISEQMYNIAAKLVVVCDHLKGQEFG-----DSLEY------KPSIIIFLPGINEIE 317
Query: 569 KL---LDQI--KVNKFLGDPNKFLVLPLHGSMPTINQREIFDRPPPNKRKIVLATNIAES 623
K+ L+++ + PN L++ LH ++P +Q +F +P PN+RK++L+TNIAES
Sbjct: 318 KMEGALEKLIASIQNAAQRPN-LLIMKLHSTLPADDQTAVFRKPGPNQRKVILSTNIAES 376
Query: 624 SITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPGVCYKLYP 683
SIT+ D+ +V+D + D L + L W SK++ QR GRAGR+ G Y+L
Sbjct: 377 SITVPDIKFVIDFCLQRILVTDTLTNFSTLRTEWASKSNCIQRAGRAGRLMSGRVYRLVD 436
Query: 684 -RIIHDAMLPYQLPEILRTPLQELCLHIKSLQLGTVGSFLSKALQPPDPLAVQNAIELLK 742
R + M PEILR PL+ + L K L++GT S L+ A+ PP+ ++N I LLK
Sbjct: 437 RRFFENNMDVSTSPEILRCPLETVVLKAKLLEMGTPPSILALAMAPPNLDDIRNTILLLK 496
Query: 743 TIGAL--------DDME-NLTPLGRHLCTLPVDPNIGKMLLMGAIFQCLNPALTIAAALA 793
+GA+ D ++ +LT LGR + LP+D I K++++G IF + A+TI A +
Sbjct: 497 EVGAMLRTVKGNYDQLDGDLTYLGRIMSKLPLDIRISKLIMLGYIFSVMEEAVTIGAGMN 556
Query: 794 HRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAKRNRRERD----FCWEN 849
+N F L N K + K +A S SD IA+L A+ +K R + D + W
Sbjct: 557 VKNIF-LNQNSVKTYSQ-KMYWADGSGSDAIAILNAYTAWK--SRQEQAGDTADMYNWAR 612
Query: 850 FLS--PITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYSHDLEMVCAILCAG-LYPN 906
+S +L M ++ + D L+ G S GP+ + + ++ ++ AG YPN
Sbjct: 613 RMSLDRKSLIDMAELIHEVKDRLNRSGLKPVS-GPNRVVWNAREKTVILKVILAGAFYPN 671
>sp|B8A4F4|TDRD9_DANRE Putative ATP-dependent RNA helicase TDRD9 OS=Danio rerio GN=tdrd9
PE=2 SV=1
Length = 1342
Score = 314 bits (804), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 224/654 (34%), Positives = 335/654 (51%), Gaps = 62/654 (9%)
Query: 281 LPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQPRR 340
LP K + E + + N V+++ G TG GKTTQLPQFIL+ + R CN++ TQPR+
Sbjct: 89 LPITKNRQELVSLIENNSVVIIRGATGSGKTTQLPQFILDH--YAERNIPCNLVVTQPRK 146
Query: 341 ISAISVAARVSSERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVEDPDLSCVS 400
I A S+A V+ ER LG VGYQ+ LE + T+L++ TTGVLL++LV L+ S
Sbjct: 147 IGATSIARWVARERKCTLGSLVGYQVGLEKMATEHTKLIYVTTGVLLQKLVSSKTLTEYS 206
Query: 401 HLLVDEIHERGMNEDFLLIILRDLLPRRPD-LRLILMSATINADLFSKYFGN-------- 451
H+ +DE+HER DFLL+++R LL +++ILMSATIN F++YFG+
Sbjct: 207 HIFIDEVHERSEELDFLLLVVRKLLRSNSRYVKVILMSATINCIEFAEYFGSPIRNQMNP 266
Query: 452 APTVHIPGLTFPVTDLFLEDVLEKTRYKMNSKLDSFQGNSRRSRRQDSKKDHLTALFEDV 511
A + G + V + +L+++ KT + LD L +D
Sbjct: 267 AYVFEVEGAPYAVEEYYLDEL--KTMLPVGVNLD-------------------LTLPQDP 305
Query: 512 DIDSNYKNYRASTRASLEAWSAEQIDLGLVESTIEYICRHEGDGAILVFLTGWNDISKLL 571
I N S S + A+ D E T H G++LVFL G +I +
Sbjct: 306 YITEEMYNVAVSLIQSFDEMEAK--DHRRSEQTGS--TTHPERGSVLVFLPGLAEIQYMK 361
Query: 572 DQIKVNKFLGDPNKFLVLPLHGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVV 631
+ + +K + + V PLH ++ Q +F P P RKI+L+TNIAESS+T+ DV
Sbjct: 362 EAL--SKLVR--KRLQVYPLHSTVTLEEQNGVFLVPVPGYRKIILSTNIAESSVTVPDVK 417
Query: 632 YVVDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAML 691
YV+D ++ + D CL +W SK S +QRRGRAGRV G CY+L R + +
Sbjct: 418 YVIDFCLVRQLACDKETNYRCLRITWASKTSCNQRRGRAGRVSKGFCYRLVTRHFWENEI 477
Query: 692 P-YQLPEILRTPLQELCLHIKSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALDDM 750
P + +PE+LR+PL L +K L +G S LS AL PP ++ + LK IGAL
Sbjct: 478 PNFSIPEMLRSPLASTLLKVKLLDMGDPRSVLSTALTPPILGDIERTVLQLKQIGALSVQ 537
Query: 751 EN--------LTPLGRHLCTLPVDPNIGKMLLMGAIFQCLNPALTIAAALAHRNPFVLPV 802
N LT LGR L LPVD +GK++++G +F CL L IAA+L+ ++ F +P
Sbjct: 538 SNSQRQFDGDLTFLGRVLAQLPVDLQLGKLIVLGHVFGCLEECLIIAASLSLKSFFAMPS 597
Query: 803 NMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAKRN------RRERDFCWENFLSPITL 856
Q +K SFA + SD IA + AF + ++ + E ++ EN I +
Sbjct: 598 LQQLAGYRSKLSFAQNVPSDFIAYVNAFKAWYTSRAKGELRHPKDELEWGKENC---IQI 654
Query: 857 QMMEDMRSQFLDLLSDIG----FVDKSKGPSAYNRYSHDLEMVCAILCAGLYPN 906
+ + ++ F DL + + S P+ Y ++ ++ L+PN
Sbjct: 655 KRIREVAELFEDLKKRVSRFNMHISSSSNPTDYTSLHKQRFILQVVIAGALFPN 708
>sp|Q7QCW2|SPNE_ANOGA Probable ATP-dependent RNA helicase spindle-E OS=Anopheles gambiae
GN=spn-E PE=3 SV=5
Length = 1463
Score = 313 bits (801), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 205/583 (35%), Positives = 313/583 (53%), Gaps = 66/583 (11%)
Query: 280 KLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQPR 339
+L + K + LKA+ EN V+V+ G TGCGKTTQ+PQ++LE+ + R CNI+ TQPR
Sbjct: 120 RLTIHQSKQDILKAIRENPVVVLQGMTGCGKTTQVPQYLLEDAYN--RKEWCNIVVTQPR 177
Query: 340 RISAISVAARVSSERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVEDPDLSCV 399
+I+A S+A RV+ ER LG VG+++ L+ S TRL + TTGVLL +L+ +S
Sbjct: 178 KIAASSIARRVAEERNCALGSLVGFKVGLKEMVSEDTRLTYVTTGVLLNKLITSKSISSY 237
Query: 400 SHLLVDEIHERGMNEDFLLIILRDLLPRRPDLRLILMSATINADLFSKYFG-------NA 452
+H+++DE+HER ++ DFLLII+R LL + ++ILMSATI + F++YF A
Sbjct: 238 THIILDEVHEREVDMDFLLIIVRRLLATMRNTKIILMSATIESSEFAQYFKIPGPNSLFA 297
Query: 453 PTVHIPGLT-FPVTDLFLEDVLEKTRYKMNSKLDSFQGNSRRSRRQDSKKDHLTALFEDV 511
P + + +T V+ +LED LEK R K +E
Sbjct: 298 PQLAVSNVTQHDVSVYYLED-LEKLRVDFTIK------------------------YEQP 332
Query: 512 DIDSNYKNYRASTRASLEAWSAEQIDLGLVESTIEYICRHEGDGAILVFLTGWNDISKLL 571
D+ A + + ID STI+Y +I++FL G N+I ++
Sbjct: 333 DVHEKMYFLAAKVAVVCDRF----IDEFESASTIDY------KPSIIMFLPGINEIERMA 382
Query: 572 DQIKVNKFLGDPN-------KFLVLPLHGSMPTINQREIFDRPPPNKRKIVLATNIAESS 624
+ ++ FLGD N KF +L LH +P+ Q +F +P P RK++L+TNIAESS
Sbjct: 383 EVLR--NFLGDSNVNSQEQTKFTILKLHSMLPSEEQALVFTKPSPGYRKVILSTNIAESS 440
Query: 625 ITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPGVCYKLYPR 684
ITI DV +V+D + D LN L W S+ + QR GR GRV G Y+L +
Sbjct: 441 ITIPDVKFVIDFCLHRVLVADTLNNFTTLRTQWASRNNCIQRAGRCGRVMNGRVYRLVNK 500
Query: 685 IIHDAMLPYQL-PEILRTPLQELCLHIKSLQLGTVGSFLSKALQPPDPLAVQNAIELLKT 743
+ + + PE++R PL + L K L +G + L+ A+ PP+ V N + LK
Sbjct: 501 HFFEHGMAQSIEPEMVRCPLSNVVLKTKLLDMGPPHTILALAMSPPNLSDVSNTVLQLKE 560
Query: 744 IGAL-------DDME--NLTPLGRHLCTLPVDPNIGKMLLMGAIFQCLNPALTIAAALAH 794
+GAL D++ ++T LG + TLP+D ++ K++++G +F L A+ IAA +
Sbjct: 561 LGALLRTAKGVYDLQDGDITYLGNIMSTLPLDIHLAKLVVLGYVFSVLEEAIVIAAGMNV 620
Query: 795 RNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAK 837
+N F + E KR FA S SD IA+L A++ ++ +
Sbjct: 621 KNIFCQLRTI--EALRVKRHFANGSASDGIAILNAYNWWRSIR 661
>sp|Q16JS8|SPNE_AEDAE Probable ATP-dependent RNA helicase spindle-E OS=Aedes aegypti
GN=spn-E PE=3 SV=1
Length = 1374
Score = 308 bits (790), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 223/648 (34%), Positives = 342/648 (52%), Gaps = 53/648 (8%)
Query: 280 KLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQPR 339
KLP K + L + EN V+V+ G TGCGKTTQ+PQFILEE R CNII TQPR
Sbjct: 35 KLPIRHSKDDILARIRENPVIVLEGPTGCGKTTQVPQFILEEAYH--RKEYCNIIVTQPR 92
Query: 340 RISAISVAARVSSERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVEDPDLSCV 399
+I+A+S+A RVS ER LG VG+++ L+ S TRLL+CTTGVLL+ L+ ++
Sbjct: 93 KIAAMSIAKRVSEERKCELGTLVGFKVGLKECLSPDTRLLYCTTGVLLQSLINSKTMANY 152
Query: 400 SHLLVDEIHERGMNEDFLLIILRDLLPRRPD-LRLILMSATINADLFSKYFGNAPTVHIP 458
+H+++DEIHER ++ DFLLI++R L ++ILMSATI++ F++YF V
Sbjct: 153 THVILDEIHEREVDMDFLLIVVRRFLATNSSKTKVILMSATIDSKAFAEYFKTPKKVGY- 211
Query: 459 GLTFPVTDLFLEDVLEKTRYKMNSKLDSFQGNSRRSRRQDSKKDHLTALFEDVDIDSNYK 518
LT P+ + R ++ D L L D ID Y+
Sbjct: 212 -LTAPIISV---------------------DRPRLYEVKEFYYDDLDKLRLDFAID--YE 247
Query: 519 NYRASTRASLEAWSAEQIDLGLVESTIEYICRHEGDGAILVFLTGWNDISKLLDQIK--V 576
N S+ A + L+E+ + R E +L+FL G N+I ++ ++ +
Sbjct: 248 NPGISSHMYTVAAKLVLVCDRLIEN-MHGEERMEYKPTVLIFLPGINEIDRMDHVLRETL 306
Query: 577 NKFLGDPNK--FLVLPLHGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVV 634
+ + K + LH +P Q ++F +P P +RK++L+TNIAESSIT+ DV +++
Sbjct: 307 TRIVNPKEKPNLDIHRLHSILPADEQVKVFRKPAPGQRKVILSTNIAESSITVPDVKFII 366
Query: 635 DCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQ 694
D + D + L W S+A+ QR+GRAGRV G Y+L R ++ + +
Sbjct: 367 DFCLQRVLFTDTTTNFSTLRTEWASQANCIQRQGRAGRVMDGRVYRLVDRRFYENQMRFS 426
Query: 695 L-PEILRTPLQELCLHIKSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGAL------ 747
PEILR PL+ + L K L++G S L+ A+ PPD ++N + LK +GAL
Sbjct: 427 TSPEILRCPLENVILKAKLLEMGPPHSILALAMNPPDLSDIRNTVLQLKELGALVQTVKG 486
Query: 748 --DDME-NLTPLGRHLCTLPVDPNIGKMLLMGAIFQCLNPALTIAAALAHRNPFVLPVNM 804
+ ++ +LT +GR + LP+D I K++++G IF L ++ IAA + +N F L N
Sbjct: 487 NYEQLDGDLTYMGRIMAKLPLDLRISKLIILGYIFSVLEESIIIAAGMNEKNIF-LNQNS 545
Query: 805 QKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAKRNR-RERDFC-WENFLSPITLQMMEDM 862
+ + K +A S SD IA+L A+ +K K E D W +S + L+ + DM
Sbjct: 546 VRGYSQ-KMYWADGSGSDGIAILNAYIAWKSRKEQAGNESDMASWTRRMS-LDLKCLMDM 603
Query: 863 RS---QFLDLLSDIGFVDKSKGPSAYNRYSHDLEMVCAILCAG-LYPN 906
+ D L+ +G + S GP S + ++ ++ AG YPN
Sbjct: 604 AELIREIKDRLNHVGMKEVS-GPGRVVWSSREKTVILKVIMAGAFYPN 650
>sp|Q14BI7|TDRD9_MOUSE Putative ATP-dependent RNA helicase TDRD9 OS=Mus musculus GN=Tdrd9
PE=1 SV=3
Length = 1383
Score = 305 bits (780), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 213/653 (32%), Positives = 331/653 (50%), Gaps = 61/653 (9%)
Query: 281 LPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQPRR 340
LP + K E + + N V+++ G TG GK+TQLPQ++L+ + R A CNI+ TQPR+
Sbjct: 134 LPINRCKEEVISLIESNSVVIIHGATGSGKSTQLPQYVLDH--YTQRSAFCNIVVTQPRK 191
Query: 341 ISAISVAARVSSERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVEDPDLSCVS 400
I A S+A +S ER LG VGYQ+ LE + TRL++ TTGVLL+++V L +
Sbjct: 192 IGASSIARWISKERSWTLGGLVGYQVGLEKIATEDTRLIYMTTGVLLQKIVSAKSLMEFT 251
Query: 401 HLLVDEIHERGMNEDFLLIILRDLLPRRPD-LRLILMSATINADLFSKYFG--------N 451
H+ +DE+HER DFLL+++R LL ++++LMSATIN F+ YF
Sbjct: 252 HIFIDEVHERTEEMDFLLLVVRKLLRTNSRFVKVVLMSATINCKQFADYFAVPVQNKMNP 311
Query: 452 APTVHIPGLTFPVTDLFLEDVLEKTRYKMNSKLDSFQGNSRRSRRQDSKKDHLTALFEDV 511
A + G + + +L D+ + +L+ ++ L +F+D+
Sbjct: 312 AYVFEVEGKPHAIEEYYLNDLGHIYHSGLPYRLE----EPVITKDVYEVAVSLIQMFDDL 367
Query: 512 DIDSNYKNYRASTRASLEAWSAEQIDLGLVESTIEYICRHEGDGAILVFLTGWNDISKLL 571
D+ + + WS Q ++ ++LVFL G +I+ +
Sbjct: 368 DMK----------ESGNKTWSGAQ-----------FVSER---SSVLVFLPGLGEIN-YM 402
Query: 572 DQIKVNKFLGDPNKFLVLPLHGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVV 631
++ N + V PLH S+ Q +F P P RKI+L+TNIAESS+T+ DV
Sbjct: 403 HELLTNMI---HKRLQVYPLHSSVTLEEQNNVFLSPVPGYRKIILSTNIAESSVTVPDVK 459
Query: 632 YVVDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDAML 691
YV+D + D L SW SK S QR+GRAGRV G CY+L PR D+ +
Sbjct: 460 YVIDFCLTRTLVCDEDTNYQSLRLSWASKTSCDQRKGRAGRVSKGYCYRLIPRDFWDSAI 519
Query: 692 P-YQLPEILRTPLQELCLHIKSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALD-- 748
P + +PE+LR PL L +K L +G + L+ AL PP ++ I LLK +GAL
Sbjct: 520 PDHVVPEMLRCPLGSTILKVKLLDMGEPRALLATALSPPSLSDIERTILLLKEVGALAVS 579
Query: 749 ---DMEN-----LTPLGRHLCTLPVDPNIGKMLLMGAIFQCLNPALTIAAALAHRNPFVL 800
+ EN LT LGR L LPV +GK++++G +F CL+ L IAAAL+ +N F +
Sbjct: 580 GQREDENPHDGELTFLGRVLAQLPVSQQLGKLVVLGHVFGCLDECLIIAAALSLKNFFTM 639
Query: 801 PVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYK------DAKRNRRERDFCWENFLSPI 854
P + K F+G S SD +AL++AF ++ + +R + E D+ N++
Sbjct: 640 PFRQHLDGYRNKVHFSGSSRSDCLALVEAFRAWQACRQRGELRRPKDELDWGRLNYIQIK 699
Query: 855 TLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYSHDLEMVCAILCAG-LYPN 906
++ + ++ + + +S P Y + + ++ AG YPN
Sbjct: 700 RIREVAELYEELKNRISQFNMFVGPHHPVLDQEYPYKQRFILQVVLAGAFYPN 752
>sp|B4JT42|SPNE_DROGR Probable ATP-dependent RNA helicase spindle-E OS=Drosophila
grimshawi GN=spn-E PE=3 SV=1
Length = 1434
Score = 304 bits (778), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 211/669 (31%), Positives = 342/669 (51%), Gaps = 62/669 (9%)
Query: 281 LPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQPRR 340
LP + + + +KA+ EN V+++ GETGCGKTTQ+PQ+IL+E + CNI+ TQPRR
Sbjct: 117 LPIYAQREQIMKAIKENPVVILKGETGCGKTTQVPQYILDEAFK--KREFCNIVVTQPRR 174
Query: 341 ISAISVAARVSSERGENLGETVGYQIRLESK-RSAQTRLLFCTTGVLLRQLVEDPDLSCV 399
I+AIS+A RV ER G YQ+ L + SA TRLL+CTTGVLL L+ L+
Sbjct: 175 IAAISIANRVCQERRWQPGTVCSYQVGLHKQSNSADTRLLYCTTGVLLNNLIRLKTLTHY 234
Query: 400 SHLLVDEIHERGMNEDFLLIILRDLLPRRP-DLRLILMSATINADLFSKYFGNA----PT 454
+H+++DE+H+R + DFLLI++R LL +++ILMSATI+ F KYF + P
Sbjct: 235 THIVLDEVHDRDQDMDFLLIVVRRLLALNSRHVKVILMSATIDTREFCKYFASCKSMPPV 294
Query: 455 VHIP-GLTFPVTDLFLEDVLEKTRYKMNSKLDSFQGNSRRSRRQDSKKDHLTALFEDVDI 513
V G +P+ + D L+ +K + ++ +T
Sbjct: 295 VAASHGRKYPLVKYY-RDQLKNINWKTEPQ---------------QREPGIT-------- 330
Query: 514 DSNYKNYRASTRASLEAWSAEQIDLGLVESTIEYICRHEGDGAILVFLTGWNDISKLLDQ 573
++ YR + + L + E+ G E + E R G++L+FL G N+I + +
Sbjct: 331 ---HEGYRDAVKILLVIDNMERKAEGQSEQSYEEAKR---TGSVLIFLPGVNEIDTMAEH 384
Query: 574 IKVNKFLGDPN-KFLVLPLHGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVY 632
I+ + PN K ++ H M + +Q ++F P RK++L TNIAESSIT+ DV Y
Sbjct: 385 IE-HVMNESPNIKITIVRCHSLMSSDSQEDVFQPPLSGHRKVILTTNIAESSITVTDVSY 443
Query: 633 VVDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIH-DAML 691
V+D AK D + +CL W SK + QR GR GR + G Y++ + + + M
Sbjct: 444 VIDFCLAKVMHIDTASNFSCLCLEWASKVNCRQRAGRVGRTRSGRVYRMVTKAFYMEEMQ 503
Query: 692 PYQLPEILRTPLQELCLHIKSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGAL---- 747
+ +PE+LR+PLQ L K L +G L+ A+ PP+ + N + LLK +GAL
Sbjct: 504 EFGIPEMLRSPLQSSVLKAKELDMGGPSEILALAMSPPNLTDIHNTVLLLKEVGALYTTV 563
Query: 748 ----DDME-NLTPLGRHLCTLPVDPNIGKMLLMGAIFQCLNPALTIAAALAHRNPFVLPV 802
+ ++ +LT G + P+D + +++++G IF CL+ A+ IAA ++ R+ + L
Sbjct: 564 DGVYEQLDGDLTYWGTIMSRFPLDVRLSRLIILGYIFNCLDEAIIIAAGMSVRSLY-LSG 622
Query: 803 NMQKEVDE--AKRSFAGDSCSDHIALLKAFDGYKDAKRN--RRERDFCWENFLSPITLQM 858
Q+ D FA S SD + + + Y + +N ++ + W + ++L+
Sbjct: 623 QRQRTSDAFWMHYIFADGSGSDLVGFWRVYKIYVNMCQNLPMKDSEVQWARRYN-VSLRS 681
Query: 859 MEDMRSQFLDLLSDIGFVDKSKGPSAYNRYSHDLE---MVCAILCAGLYPNVVQCKRKGK 915
+++M +L ++ P + HD E ++ I+ YPN R K
Sbjct: 682 LKEMYLLVQELQKRCAALNLVSLPVGASHMWHDREKSIILKVIIAGAFYPNYF--TRNNK 739
Query: 916 RAVFYTKEV 924
Y ++V
Sbjct: 740 TIPDYDRDV 748
>sp|P43329|HRPA_ECOLI ATP-dependent RNA helicase HrpA OS=Escherichia coli (strain K12)
GN=hrpA PE=3 SV=3
Length = 1300
Score = 303 bits (776), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 199/626 (31%), Positives = 331/626 (52%), Gaps = 80/626 (12%)
Query: 269 DSGKAMLSFREKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRG 328
++ + +++ + LP + K + L+A+ ++QV++V+GETG GKTTQLP+ +E RG
Sbjct: 65 EAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELG----RG 120
Query: 329 ADCNIICTQPRRISAISVAARVSSERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLR 388
I TQPRR++A +VA R++ E G +GY++R S T + T G+LL
Sbjct: 121 IKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLA 180
Query: 389 QLVEDPDLSCVSHLLVDEIHERGMNEDFLLIILRDLLPRRPDLRLILMSATINADLFSKY 448
++ +D L +++DE HER +N DFLL L++LLPRRPDL++I+ SATI+ + FS++
Sbjct: 181 EIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRH 240
Query: 449 FGNAPTVHIPGLTFPVTDLFLEDVLEKTRYK-MNSKLDSFQGNSRRSRRQDSKKDHLTAL 507
F NAP + + G T+PV + RY+ + + D D+++D L A+
Sbjct: 241 FNNAPIIEVSGRTYPV----------EVRYRPIVEEAD------------DTERDQLQAI 278
Query: 508 FEDVDIDSNYKNYRASTRASLEAWSAEQIDLGLVESTIEYICRHEGDGAILVFLTGWNDI 567
F+ VD S E G IL+F++G +I
Sbjct: 279 FDAVDELS-----------------------------------QESHGDILIFMSGEREI 303
Query: 568 SKLLDQIKVNKFLGDPNKFLVLPLHGSMPTINQREIFDRPPPNKRKIVLATNIAESSITI 627
D + NK + +LPL+ + Q +F + R+IVLATN+AE+S+T+
Sbjct: 304 RDTADAL--NKL--NLRHTEILPLYARLSNSEQNRVFQ--SHSGRRIVLATNVAETSLTV 357
Query: 628 DDVVYVVDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIH 687
+ YV+D G A+ + Y K+ L IS+ASA+QR+GR GRV G+C +LY
Sbjct: 358 PGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDF 417
Query: 688 DAMLPYQLPEILRTPLQELCLHIKSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGAL 747
+ + PEILRT L + L + +L LG + +F ++ PD +Q+ + LL+ +GA+
Sbjct: 418 LSRPEFTDPEILRTNLASVILQMTALGLGDIAAF--PFVEAPDKRNIQDGVRLLEELGAI 475
Query: 748 DDMEN-----LTPLGRHLCTLPVDPNIGKMLLMGAIFQCLNPALTIAAALAHRNPFVLPV 802
E LTPLGR L LPVDP + +M+L C+ A+ I +AL+ ++P P+
Sbjct: 476 TTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPM 535
Query: 803 NMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAKR---NRRERDFCWENFLSPITLQMM 859
+ Q+ DE R F D SD +A + ++ + ++ + R C ++L+ + ++
Sbjct: 536 DKQQASDEKHRRF-HDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREW 594
Query: 860 EDMRSQFLDLLSDIGFVDKSKGPSAY 885
+D+ +Q ++ ++G S+ P+ Y
Sbjct: 595 QDIYTQLRQVVKELGIPVNSE-PAEY 619
>sp|Q8NDG6|TDRD9_HUMAN Putative ATP-dependent RNA helicase TDRD9 OS=Homo sapiens GN=TDRD9
PE=2 SV=3
Length = 1382
Score = 302 bits (774), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 217/655 (33%), Positives = 334/655 (50%), Gaps = 64/655 (9%)
Query: 281 LPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQPRR 340
LP + K E + + N V+++ G TG GK+TQLPQ+IL+ + R A C+I+ TQPR+
Sbjct: 132 LPISRYKEEVVSLIESNSVVIIHGATGSGKSTQLPQYILDHYVQ--RSAYCSIVVTQPRK 189
Query: 341 ISAISVAARVSSERGENLGETVGYQIRLESKRSAQTRLLFCTTGVLLRQLVEDPDLSCVS 400
I A S+A +S ER LG VGYQ+ LE + TRL++ TTGVLL+++V L +
Sbjct: 190 IGASSIARWISKERAWTLGGVVGYQVGLEKIATEDTRLIYMTTGVLLQKIVSAKSLMEFT 249
Query: 401 HLLVDEIHERGMNEDFLLIILRDLLPRRPD-LRLILMSATINADLFSKYFG--------N 451
H+++DE+HER DFLL+++R LL ++++LMSATI+ F+ YF
Sbjct: 250 HIIIDEVHERTEEMDFLLLVVRKLLRTNSRFVKVVLMSATISCKEFADYFAVPVQNKMNP 309
Query: 452 APTVHIPGLTFPVTDLFLEDVLEKTRYKMNSKLDSFQGNSRRSRRQDSKKDHLTALFEDV 511
A + G V + +L D+ K++ L ++ L +F+D+
Sbjct: 310 AYIFEVEGKPHSVEEYYLNDLEHIHHSKLSPHLLE---EPVITKDIYEVAVSLIQMFDDL 366
Query: 512 DIDSNYKNYRASTRASLEAWSAEQIDLGLVESTIEYICRHEGDGAILVFLTGWNDISKLL 571
D+ + +AWS Q L ++LVFL G +I+ +
Sbjct: 367 DMK----------ESGNKAWSGAQFVLE--------------RSSVLVFLPGLGEINYMH 402
Query: 572 DQIK--VNKFLGDPNKFLVLPLHGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDD 629
+ + V+K + V PLH S+ Q +F P P RKI+L+TNIAESS+T+ D
Sbjct: 403 ELLTSLVHK------RLQVYPLHSSVALEEQNNVFLSPVPGYRKIILSTNIAESSVTVPD 456
Query: 630 VVYVVDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHDA 689
V YV+D + D L SW SK S +QR+GRAGRV G CY+L + D
Sbjct: 457 VKYVIDFCLTRTLVCDEDTNYQSLRLSWASKTSCNQRKGRAGRVSRGYCYRLVHKDFWDN 516
Query: 690 MLP-YQLPEILRTPLQELCLHIKSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGALD 748
+P + +PE+LR PL L +K L +G + L+ AL PP ++ I LLK +GAL
Sbjct: 517 SIPDHVVPEMLRCPLGSTILKVKLLDMGEPRALLATALSPPGLSDIERTILLLKEVGALA 576
Query: 749 -----DMEN-----LTPLGRHLCTLPVDPNIGKMLLMGAIFQCLNPALTIAAALAHRNPF 798
+ EN LT LGR L LPV+ +GK++++G +F CL+ L IAAAL+ +N F
Sbjct: 577 VSGQREDENPHDGELTFLGRVLAQLPVNQQLGKLIVLGHVFGCLDECLIIAAALSLKNFF 636
Query: 799 VLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAKRNRRER----DFCWE--NFLS 852
+P + K +F+G S SD IAL++AF +K ++ R + W N++
Sbjct: 637 AMPFRQHLDGYRNKVNFSGSSKSDCIALVEAFKTWKACRQTGELRYPKDELNWGRLNYIQ 696
Query: 853 PITLQMMEDMRSQFLDLLSDIGFVDKSKGPSAYNRYSHDLEMVCAILCAG-LYPN 906
++ + ++ + +S S+ P Y + + ++ AG YPN
Sbjct: 697 IKRIREVAELYEELKTRISQFNMHVDSRRPVMDQEYIYKQRFILQVVLAGAFYPN 751
>sp|B4PRJ9|SPNE_DROYA Probable ATP-dependent RNA helicase spindle-E OS=Drosophila yakuba
GN=spn-E PE=3 SV=1
Length = 1436
Score = 302 bits (774), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 216/654 (33%), Positives = 335/654 (51%), Gaps = 56/654 (8%)
Query: 279 EKLPAFKMKAEFLKAVAENQVLVVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQP 338
+ LP + + E L A+ N V+++ GETGCGKTTQ+PQ+IL+E S G CNI+ TQP
Sbjct: 112 KNLPIYAKREEILAAINANPVVILKGETGCGKTTQVPQYILDEGYKS--GKYCNIVVTQP 169
Query: 339 RRISAISVAARVSSERGENLGETVGYQIRLESKRSAQ-TRLLFCTTGVLLRQLVEDPDLS 397
RRI+AIS+A RV ER YQ+ L S + TRLL+CTTGVLL L+ + L+
Sbjct: 170 RRIAAISIANRVCQEREWQQDTVCSYQVGLHRPTSLEDTRLLYCTTGVLLNNLIRNKTLT 229
Query: 398 CVSHLLVDEIHERGMNEDFLLIILRDLLPRRP-DLRLILMSATINADLFSKYFGNAPTVH 456
+H+++DE+HER + DFLLI++R LL +++ILMSATI+A S YF T
Sbjct: 230 HYTHIVLDEVHERDQDMDFLLIVVRRLLATNSRHVKIILMSATIDARELSDYF--TTTNS 287
Query: 457 IPGLTFPVTDLFLEDVLEKTRYKMNSKLDSFQGNSRRSRRQDSKKDHLTALFEDVDIDSN 516
IP V+ + + +S ++ + ++ + D L D
Sbjct: 288 IPP------------VISASHGRKHSIEKFYRDQMGSIKWKEEEDDQLVPQIND------ 329
Query: 517 YKNYRASTRASLEAWSAEQIDLGLVESTIEY--ICRHEGDGAILVFLTGWNDISKLLDQI 574
YRA+ + + + E+ G + S + Y R+ GA+L+FL G +I + + I
Sbjct: 330 -HGYRAAVKIIMVIDNMER--EGAIHSRMSYDEALRY---GAVLIFLPGIYEIDTMAENI 383
Query: 575 KVNKFLGDPN-KFLVLPLHGSMPTINQREIFDRPPPNKRKIVLATNIAESSITIDDVVYV 633
+ D N K ++ M NQR++F PPP RKI+L TNIAESSIT+ DV YV
Sbjct: 384 TL-MLENDRNVKVFIVRCFSLMTPENQRDVFHPPPPGFRKIILTTNIAESSITVPDVSYV 442
Query: 634 VDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPGVCYKLYPRIIHD-AMLP 692
+D K D + L +W SKA+ QR GR GR++ G Y++ + + M
Sbjct: 443 IDFCLTKVLVTDTATNFSSLRLTWASKANCRQRAGRVGRLRSGRVYRMVNKSFYQREMSE 502
Query: 693 YQLPEILRTPLQELCLHIKSLQLGTVGSFLSKALQPPDPLAVQNAIELLKTIGAL----D 748
+ +PE+LR PLQ L K L++G+ L+ AL PP+ +QN I LLK +GAL D
Sbjct: 503 FGIPEMLRLPLQNSVLRAKELEMGSPVEILALALSPPNLSDIQNTILLLKEVGALFLTVD 562
Query: 749 DMEN-----LTPLGRHLCTLPVDPNIGKMLLMGAIFQCLNPALTIAAALAHRNPFVLPVN 803
+ N +T G + LP+DP + +++++G +F L A+ +AA L+ R +V +
Sbjct: 563 GVYNAMDGDVTYWGTIMSRLPLDPRLSRLIILGYVFNLLEEAIIMAAGLSMRGLYVHEGS 622
Query: 804 MQKEVDEAKRS------FAGDSCSDHIALLKAFDGYKDAKR--NRRERDFCWENFLSPIT 855
+ S FA S SD +A+ + + Y + + +E W N ++
Sbjct: 623 SSRSTRAQFDSFWMHYIFADGSGSDLVAIWRVYLTYLNMVEIGHEQESAIRWANRFH-VS 681
Query: 856 LQMMEDMRSQFLDL---LSDIGFVDKSKGPSAYNRYSHDLEMVCAILCAGLYPN 906
L+ +++M +L +++G + S PS ++ I+ YPN
Sbjct: 682 LRSLKEMHLLVQELRVRCTNLGLIPFSVNPSQIMDDREKSFILKVIIAGAFYPN 735
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.136 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 387,104,866
Number of Sequences: 539616
Number of extensions: 17423685
Number of successful extensions: 141959
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1003
Number of HSP's successfully gapped in prelim test: 374
Number of HSP's that attempted gapping in prelim test: 91258
Number of HSP's gapped (non-prelim): 25946
length of query: 1044
length of database: 191,569,459
effective HSP length: 128
effective length of query: 916
effective length of database: 122,498,611
effective search space: 112208727676
effective search space used: 112208727676
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 67 (30.4 bits)