Query 001616
Match_columns 1044
No_of_seqs 544 out of 3207
Neff 7.7
Searched_HMMs 46136
Date Fri Mar 29 05:11:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001616.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/001616hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0204 Calcium transporting A 100.0 8E-239 2E-243 2021.5 64.8 993 21-1035 13-1020(1034)
2 KOG0202 Ca2+ transporting ATPa 100.0 6E-163 1E-167 1397.9 63.6 879 113-1022 8-967 (972)
3 TIGR01517 ATPase-IIB_Ca plasma 100.0 5E-156 1E-160 1477.9 102.0 912 84-1022 13-940 (941)
4 TIGR01523 ATPase-IID_K-Na pota 100.0 7E-147 2E-151 1392.5 94.1 866 113-1021 11-1045(1053)
5 TIGR01522 ATPase-IIA2_Ca golgi 100.0 2E-143 5E-148 1354.7 97.4 840 113-1021 8-880 (884)
6 TIGR01106 ATPase-IIC_X-K sodiu 100.0 2E-142 5E-147 1356.7 96.3 876 113-1021 21-983 (997)
7 COG0474 MgtA Cation transport 100.0 5E-141 1E-145 1328.1 85.4 842 116-1011 32-902 (917)
8 TIGR01116 ATPase-IIA1_Ca sarco 100.0 8E-138 2E-142 1306.7 90.4 839 160-1021 1-916 (917)
9 PRK15122 magnesium-transportin 100.0 4E-137 8E-142 1291.2 92.7 828 113-1020 31-894 (903)
10 TIGR01524 ATPase-IIIB_Mg magne 100.0 4E-135 9E-140 1271.8 91.1 817 113-1020 19-859 (867)
11 PRK10517 magnesium-transportin 100.0 4E-135 8E-140 1270.9 90.5 814 113-1019 53-893 (902)
12 TIGR01647 ATPase-IIIA_H plasma 100.0 1E-122 3E-127 1145.1 84.2 744 128-982 1-752 (755)
13 TIGR01657 P-ATPase-V P-type AT 100.0 2E-123 5E-128 1189.9 78.6 805 126-1001 137-1048(1054)
14 KOG0203 Na+/K+ ATPase, alpha s 100.0 1E-124 2E-129 1078.1 39.0 883 113-1029 43-1015(1019)
15 TIGR01652 ATPase-Plipid phosph 100.0 6E-111 1E-115 1078.8 75.9 841 143-1021 1-1044(1057)
16 PLN03190 aminophospholipid tra 100.0 1E-102 3E-107 990.3 84.2 750 142-918 86-1038(1178)
17 PRK14010 potassium-transportin 100.0 2.6E-94 5.7E-99 864.1 62.6 580 162-873 28-630 (673)
18 KOG0208 Cation transport ATPas 100.0 3.7E-94 8E-99 837.9 57.9 801 126-997 158-1095(1140)
19 PRK01122 potassium-transportin 100.0 4.7E-93 1E-97 854.1 64.5 584 161-873 28-634 (679)
20 TIGR01497 kdpB K+-transporting 100.0 6.6E-89 1.4E-93 816.2 63.0 546 162-835 28-583 (675)
21 KOG0206 P-type ATPase [General 100.0 6.5E-89 1.4E-93 834.9 38.1 852 139-1026 28-1079(1151)
22 KOG0210 P-type ATPase [Inorgan 100.0 5.2E-87 1.1E-91 747.9 43.9 815 139-1024 75-1041(1051)
23 KOG0205 Plasma membrane H+-tra 100.0 1.7E-86 3.7E-91 740.9 40.6 634 111-835 20-659 (942)
24 COG2217 ZntA Cation transport 100.0 3.6E-78 7.9E-83 724.6 55.9 545 153-843 131-682 (713)
25 PRK11033 zntA zinc/cadmium/mer 100.0 7.9E-77 1.7E-81 734.4 61.5 535 154-843 171-711 (741)
26 TIGR01494 ATPase_P-type ATPase 100.0 4.2E-77 9E-82 714.0 56.2 493 201-871 4-498 (499)
27 KOG0209 P-type ATPase [Inorgan 100.0 2.2E-77 4.8E-82 682.0 49.4 820 127-1021 161-1148(1160)
28 TIGR01525 ATPase-IB_hvy heavy 100.0 2.1E-74 4.6E-79 697.0 54.8 526 171-844 4-531 (556)
29 TIGR01512 ATPase-IB2_Cd heavy 100.0 2.9E-73 6.2E-78 683.0 55.6 503 171-843 4-509 (536)
30 TIGR01511 ATPase-IB1_Cu copper 100.0 8.9E-72 1.9E-76 672.2 57.5 499 191-845 51-551 (562)
31 KOG0207 Cation transport ATPas 100.0 6.9E-73 1.5E-77 661.8 42.6 564 153-846 291-871 (951)
32 PRK10671 copA copper exporting 100.0 3.8E-71 8.3E-76 697.1 61.2 509 192-841 284-793 (834)
33 COG2216 KdpB High-affinity K+ 100.0 5.7E-59 1.2E-63 511.0 38.2 544 203-873 76-636 (681)
34 PF00122 E1-E2_ATPase: E1-E2 A 100.0 4.3E-34 9.4E-39 308.8 21.7 226 199-447 2-230 (230)
35 PF00689 Cation_ATPase_C: Cati 99.9 5E-25 1.1E-29 229.2 14.6 171 849-1020 1-182 (182)
36 PF00702 Hydrolase: haloacid d 99.9 1.3E-23 2.7E-28 223.9 13.0 97 653-779 115-215 (215)
37 KOG4383 Uncharacterized conser 99.9 8.5E-20 1.8E-24 205.9 36.4 303 580-884 698-1149(1354)
38 PF13246 Hydrolase_like2: Puta 99.6 6.4E-15 1.4E-19 134.5 9.2 88 501-592 2-91 (91)
39 COG4087 Soluble P-type ATPase 99.5 1.2E-13 2.6E-18 128.2 10.8 125 655-812 20-146 (152)
40 PF00690 Cation_ATPase_N: Cati 99.2 2.1E-11 4.6E-16 105.5 7.0 67 111-179 3-69 (69)
41 smart00831 Cation_ATPase_N Cat 99.1 1.2E-10 2.7E-15 99.1 6.2 62 120-183 2-63 (64)
42 TIGR02137 HSK-PSP phosphoserin 98.9 8.5E-09 1.8E-13 108.9 11.3 129 665-815 68-198 (203)
43 TIGR01487 SPP-like sucrose-pho 98.9 1.1E-08 2.3E-13 109.6 11.3 146 665-811 18-214 (215)
44 PRK11133 serB phosphoserine ph 98.8 2E-08 4.4E-13 113.1 11.9 131 665-813 181-316 (322)
45 COG0561 Cof Predicted hydrolas 98.8 3.8E-08 8.2E-13 108.8 13.9 148 666-814 21-259 (264)
46 PRK10513 sugar phosphate phosp 98.8 3.6E-08 7.9E-13 109.2 13.4 66 747-813 196-265 (270)
47 PRK01158 phosphoglycolate phos 98.8 3.5E-08 7.7E-13 106.5 13.0 148 665-813 20-226 (230)
48 TIGR00338 serB phosphoserine p 98.8 2.8E-08 6E-13 106.6 10.9 129 665-811 85-218 (219)
49 PRK10976 putative hydrolase; P 98.8 8.1E-08 1.7E-12 106.3 14.4 66 747-813 190-261 (266)
50 PRK15126 thiamin pyrimidine py 98.8 5E-08 1.1E-12 108.3 12.7 148 665-813 19-259 (272)
51 TIGR01482 SPP-subfamily Sucros 98.7 9.2E-08 2E-12 102.9 12.4 142 665-807 15-212 (225)
52 PF08282 Hydrolase_3: haloacid 98.7 9E-08 2E-12 104.1 12.1 148 664-812 14-254 (254)
53 TIGR02726 phenyl_P_delta pheny 98.6 1.5E-07 3.3E-12 96.1 9.6 100 672-804 41-142 (169)
54 PLN02887 hydrolase family prot 98.6 3.4E-07 7.3E-12 110.4 13.4 66 747-813 507-576 (580)
55 PRK10530 pyridoxal phosphate ( 98.6 4E-07 8.8E-12 100.9 13.0 66 747-813 199-268 (272)
56 TIGR01670 YrbI-phosphatas 3-de 98.5 4.3E-07 9.4E-12 91.8 10.8 96 673-803 36-135 (154)
57 COG0560 SerB Phosphoserine pho 98.5 5.8E-07 1.3E-11 95.5 11.1 116 664-800 76-199 (212)
58 TIGR00099 Cof-subfamily Cof su 98.5 7.8E-07 1.7E-11 97.8 11.8 64 747-811 188-255 (256)
59 TIGR01486 HAD-SF-IIB-MPGP mann 98.5 2.1E-06 4.6E-11 94.4 14.9 147 666-813 17-253 (256)
60 PRK09484 3-deoxy-D-manno-octul 98.4 9.2E-07 2E-11 92.1 9.6 109 672-815 55-171 (183)
61 PRK13582 thrH phosphoserine ph 98.4 1.8E-06 4E-11 91.4 11.4 126 665-812 68-195 (205)
62 PRK03669 mannosyl-3-phosphogly 98.4 4.3E-06 9.3E-11 92.8 14.6 149 666-814 25-266 (271)
63 TIGR01491 HAD-SF-IB-PSPlk HAD- 98.3 2.1E-06 4.6E-11 90.5 10.1 117 665-797 80-200 (201)
64 PRK00192 mannosyl-3-phosphogly 98.3 1.2E-05 2.5E-10 89.4 14.9 149 664-813 20-267 (273)
65 PRK08238 hypothetical protein; 98.2 9.9E-05 2.1E-09 87.8 20.7 99 665-791 72-170 (479)
66 KOG1615 Phosphoserine phosphat 98.2 3.3E-06 7.1E-11 84.8 6.9 109 665-785 88-199 (227)
67 TIGR03333 salvage_mtnX 2-hydro 98.2 1.2E-05 2.5E-10 86.1 11.5 136 664-813 69-209 (214)
68 PF12710 HAD: haloacid dehalog 98.1 5.2E-06 1.1E-10 86.7 7.6 92 668-776 92-192 (192)
69 PLN02954 phosphoserine phospha 98.1 2.9E-05 6.3E-10 83.5 12.5 128 665-811 84-222 (224)
70 TIGR02471 sucr_syn_bact_C sucr 98.0 4.7E-05 1E-09 82.7 13.3 66 747-813 159-232 (236)
71 TIGR01489 DKMTPPase-SF 2,3-dik 98.0 2.6E-05 5.7E-10 81.1 9.1 113 664-783 71-186 (188)
72 TIGR01488 HAD-SF-IB Haloacid D 97.9 1.9E-05 4.1E-10 81.4 7.2 98 665-778 73-177 (177)
73 COG1778 Low specificity phosph 97.9 3.1E-05 6.7E-10 75.5 7.7 118 672-824 42-167 (170)
74 TIGR01490 HAD-SF-IB-hyp1 HAD-s 97.9 5.1E-05 1.1E-09 80.1 9.7 106 663-785 85-197 (202)
75 PRK13222 phosphoglycolate phos 97.9 8.3E-05 1.8E-09 79.9 11.4 126 664-814 92-223 (226)
76 PRK09552 mtnX 2-hydroxy-3-keto 97.9 6.5E-05 1.4E-09 80.6 10.2 134 665-812 74-212 (219)
77 TIGR01485 SPP_plant-cyano sucr 97.8 0.00018 3.9E-09 78.8 13.0 150 663-813 19-244 (249)
78 TIGR02461 osmo_MPG_phos mannos 97.8 0.00016 3.4E-09 77.9 11.3 44 663-706 13-56 (225)
79 cd01427 HAD_like Haloacid deha 97.7 7E-05 1.5E-09 72.7 7.2 117 661-782 20-137 (139)
80 COG0546 Gph Predicted phosphat 97.7 0.00018 4E-09 77.2 10.8 127 663-812 87-217 (220)
81 TIGR02463 MPGP_rel mannosyl-3- 97.7 0.00044 9.5E-09 74.2 13.0 38 668-705 19-56 (221)
82 TIGR01454 AHBA_synth_RP 3-amin 97.6 0.00028 6.1E-09 74.8 10.3 125 665-812 75-203 (205)
83 PF12515 CaATP_NAI: Ca2+-ATPas 97.4 5.7E-05 1.2E-09 58.3 1.5 27 22-48 13-40 (47)
84 PLN02382 probable sucrose-phos 97.4 0.0012 2.7E-08 77.4 13.3 147 666-813 29-257 (413)
85 PRK14502 bifunctional mannosyl 97.4 0.0012 2.7E-08 79.9 12.5 39 667-705 435-473 (694)
86 PRK12702 mannosyl-3-phosphogly 97.3 0.0014 3.1E-08 71.8 11.0 42 665-706 18-59 (302)
87 PRK13288 pyrophosphatase PpaX; 97.3 0.0013 2.8E-08 70.2 10.2 124 666-812 83-210 (214)
88 PRK13223 phosphoglycolate phos 97.3 0.0013 2.9E-08 72.9 10.6 124 664-812 100-229 (272)
89 TIGR01449 PGP_bact 2-phosphogl 97.2 0.0013 2.7E-08 70.0 9.2 120 665-810 85-211 (213)
90 PRK10187 trehalose-6-phosphate 97.1 0.0048 1E-07 68.3 12.3 141 665-812 36-240 (266)
91 TIGR01544 HAD-SF-IE haloacid d 97.0 0.005 1.1E-07 67.7 11.8 131 664-812 120-273 (277)
92 PRK10826 2-deoxyglucose-6-phos 97.0 0.0023 5E-08 68.7 9.0 120 664-809 91-216 (222)
93 PRK13226 phosphoglycolate phos 97.0 0.0032 7E-08 68.0 9.9 127 665-814 95-226 (229)
94 PTZ00174 phosphomannomutase; P 96.9 0.005 1.1E-07 67.4 10.6 53 746-799 187-244 (247)
95 TIGR01484 HAD-SF-IIB HAD-super 96.8 0.0056 1.2E-07 64.7 9.2 39 665-703 17-55 (204)
96 PRK13225 phosphoglycolate phos 96.7 0.011 2.3E-07 65.8 11.1 119 665-812 142-267 (273)
97 TIGR03351 PhnX-like phosphonat 96.7 0.0084 1.8E-07 64.2 9.9 122 664-811 86-218 (220)
98 TIGR01545 YfhB_g-proteo haloac 96.6 0.0086 1.9E-07 63.8 9.6 106 665-785 94-201 (210)
99 PLN03243 haloacid dehalogenase 96.5 0.016 3.4E-07 64.0 10.8 122 665-809 109-231 (260)
100 PRK11590 hypothetical protein; 96.5 0.014 3.1E-07 62.1 10.1 105 665-785 95-202 (211)
101 PLN02770 haloacid dehalogenase 96.4 0.017 3.8E-07 63.1 10.7 116 665-801 108-226 (248)
102 PRK14501 putative bifunctional 96.4 0.031 6.7E-07 70.9 14.4 141 665-812 514-720 (726)
103 TIGR01422 phosphonatase phosph 96.3 0.022 4.7E-07 62.5 10.4 94 665-781 99-196 (253)
104 PRK13478 phosphonoacetaldehyde 96.2 0.032 6.9E-07 61.8 11.0 123 665-812 101-254 (267)
105 TIGR01548 HAD-SF-IA-hyp1 haloa 96.2 0.014 3E-07 61.4 7.7 94 663-778 104-197 (197)
106 PRK11587 putative phosphatase; 96.2 0.031 6.6E-07 59.9 10.5 112 665-801 83-198 (218)
107 PRK11009 aphA acid phosphatase 96.1 0.014 3E-07 63.1 7.7 90 665-782 114-207 (237)
108 TIGR01672 AphA HAD superfamily 96.1 0.015 3.3E-07 62.9 7.5 89 665-781 114-206 (237)
109 PF05116 S6PP: Sucrose-6F-phos 96.0 0.037 8E-07 60.5 10.3 45 746-791 164-212 (247)
110 COG4030 Uncharacterized protei 96.0 0.052 1.1E-06 56.3 10.4 144 666-812 84-261 (315)
111 COG4359 Uncharacterized conser 95.9 0.019 4E-07 57.9 6.7 105 665-784 73-184 (220)
112 smart00775 LNS2 LNS2 domain. T 95.8 0.055 1.2E-06 54.8 9.9 102 663-781 25-141 (157)
113 PF06888 Put_Phosphatase: Puta 95.6 0.019 4.1E-07 61.8 5.9 112 665-783 71-196 (234)
114 TIGR01428 HAD_type_II 2-haloal 95.6 0.043 9.2E-07 57.7 8.4 93 665-781 92-187 (198)
115 PRK06698 bifunctional 5'-methy 95.5 0.063 1.4E-06 64.4 10.4 122 665-813 330-454 (459)
116 PRK08942 D,D-heptose 1,7-bisph 95.4 0.092 2E-06 54.4 10.2 124 666-812 30-176 (181)
117 TIGR01990 bPGM beta-phosphoglu 95.4 0.027 5.8E-07 58.3 6.2 91 665-781 87-180 (185)
118 PLN02575 haloacid dehalogenase 95.3 0.1 2.2E-06 60.2 11.0 118 665-808 216-337 (381)
119 TIGR01509 HAD-SF-IA-v3 haloaci 95.2 0.061 1.3E-06 55.4 8.1 92 665-780 85-178 (183)
120 TIGR02253 CTE7 HAD superfamily 95.1 0.054 1.2E-06 57.9 7.6 93 665-781 94-190 (221)
121 PHA02530 pseT polynucleotide k 95.0 0.064 1.4E-06 60.4 7.9 108 662-782 184-292 (300)
122 TIGR01662 HAD-SF-IIIA HAD-supe 94.8 0.13 2.8E-06 50.2 8.8 92 665-781 25-126 (132)
123 TIGR01685 MDP-1 magnesium-depe 94.8 0.1 2.2E-06 53.7 8.2 109 654-784 34-155 (174)
124 PF13419 HAD_2: Haloacid dehal 94.8 0.046 1E-06 55.3 5.6 95 664-781 76-172 (176)
125 TIGR02009 PGMB-YQAB-SF beta-ph 94.8 0.057 1.2E-06 55.8 6.4 92 664-781 87-181 (185)
126 TIGR02254 YjjG/YfnB HAD superf 94.8 0.096 2.1E-06 55.9 8.3 118 665-810 97-222 (224)
127 PLN02940 riboflavin kinase 94.5 0.12 2.7E-06 60.2 8.8 94 665-782 93-190 (382)
128 PRK09449 dUMP phosphatase; Pro 94.4 0.19 4.1E-06 53.9 9.5 121 665-812 95-222 (224)
129 PLN02779 haloacid dehalogenase 94.4 0.16 3.5E-06 56.9 9.1 116 665-801 144-263 (286)
130 PRK06769 hypothetical protein; 94.0 0.16 3.4E-06 52.4 7.5 96 666-784 29-135 (173)
131 PLN02580 trehalose-phosphatase 94.0 0.53 1.2E-05 54.4 12.3 66 742-812 293-373 (384)
132 PRK14988 GMP/IMP nucleotidase; 93.9 0.13 2.8E-06 55.4 7.0 94 665-782 93-189 (224)
133 TIGR01668 YqeG_hyp_ppase HAD s 93.8 0.2 4.4E-06 51.4 7.9 85 664-781 42-131 (170)
134 COG3769 Predicted hydrolase (H 93.3 0.76 1.7E-05 48.0 10.8 38 668-705 26-63 (274)
135 TIGR01459 HAD-SF-IIA-hyp4 HAD- 92.9 0.97 2.1E-05 49.2 11.8 94 658-779 17-115 (242)
136 TIGR01533 lipo_e_P4 5'-nucleot 92.8 0.48 1E-05 52.2 9.3 87 663-776 116-205 (266)
137 TIGR01549 HAD-SF-IA-v1 haloaci 92.8 0.32 7E-06 48.6 7.4 89 665-779 64-154 (154)
138 TIGR02252 DREG-2 REG-2-like, H 92.7 0.29 6.3E-06 51.5 7.2 91 665-780 105-199 (203)
139 TIGR01656 Histidinol-ppas hist 92.5 0.29 6.3E-06 48.9 6.6 96 665-781 27-140 (147)
140 COG2179 Predicted hydrolase of 92.4 0.49 1.1E-05 47.5 7.8 107 614-778 20-130 (175)
141 PLN02205 alpha,alpha-trehalose 92.2 0.71 1.5E-05 59.2 11.0 50 653-702 604-654 (854)
142 PLN02811 hydrolase 92.1 0.37 7.9E-06 51.6 7.1 95 665-783 78-181 (220)
143 TIGR00213 GmhB_yaeD D,D-heptos 92.0 0.63 1.4E-05 48.0 8.5 27 666-692 27-53 (176)
144 PRK05446 imidazole glycerol-ph 91.7 0.42 9.2E-06 54.8 7.4 97 665-783 30-145 (354)
145 smart00577 CPDc catalytic doma 91.6 0.17 3.7E-06 50.7 3.7 92 665-783 45-139 (148)
146 TIGR01681 HAD-SF-IIIC HAD-supe 91.0 0.63 1.4E-05 45.4 6.9 39 665-703 29-68 (128)
147 PLN02919 haloacid dehalogenase 91.0 0.68 1.5E-05 61.1 9.3 134 666-821 162-300 (1057)
148 TIGR01675 plant-AP plant acid 90.9 1.2 2.5E-05 47.9 9.3 88 663-772 118-209 (229)
149 TIGR00685 T6PP trehalose-phosp 90.7 0.36 7.8E-06 52.7 5.5 68 740-812 160-239 (244)
150 PF09419 PGP_phosphatase: Mito 90.5 0.95 2.1E-05 46.2 7.8 81 663-774 57-152 (168)
151 PF13344 Hydrolase_6: Haloacid 89.6 0.48 1E-05 44.2 4.5 48 659-706 8-58 (101)
152 PRK10563 6-phosphogluconate ph 89.4 0.46 9.9E-06 50.8 4.8 94 665-784 88-184 (221)
153 TIGR01261 hisB_Nterm histidino 89.2 0.67 1.4E-05 47.2 5.6 92 666-783 30-144 (161)
154 TIGR02247 HAD-1A3-hyp Epoxide 89.2 0.5 1.1E-05 50.1 4.9 93 665-781 94-191 (211)
155 TIGR01691 enolase-ppase 2,3-di 88.7 1 2.2E-05 48.3 6.8 96 663-784 93-194 (220)
156 TIGR01664 DNA-3'-Pase DNA 3'-p 88.4 1.5 3.2E-05 44.9 7.6 40 666-705 43-94 (166)
157 TIGR01686 FkbH FkbH-like domai 88.3 1.4 3E-05 50.2 8.0 91 665-785 31-129 (320)
158 TIGR01458 HAD-SF-IIA-hyp3 HAD- 86.5 6.6 0.00014 43.2 11.8 40 666-705 22-64 (257)
159 KOG3120 Predicted haloacid deh 86.3 0.96 2.1E-05 47.4 4.6 113 665-791 84-215 (256)
160 PLN02423 phosphomannomutase 85.8 5.5 0.00012 43.5 10.6 38 747-785 189-231 (245)
161 PLN03017 trehalose-phosphatase 85.5 14 0.00031 42.6 14.0 46 653-699 119-166 (366)
162 PLN02645 phosphoglycolate phos 85.0 1.3 2.8E-05 50.2 5.5 48 658-705 37-87 (311)
163 PRK09456 ?-D-glucose-1-phospha 84.8 1.8 4E-05 45.4 6.2 94 665-782 84-181 (199)
164 KOG3040 Predicted sugar phosph 84.7 4.9 0.00011 41.8 8.7 51 655-705 13-66 (262)
165 PF08235 LNS2: LNS2 (Lipin/Ned 81.0 9 0.0002 38.7 8.9 103 663-781 25-141 (157)
166 PHA02597 30.2 hypothetical pro 80.7 5.1 0.00011 41.8 7.6 94 665-782 74-170 (197)
167 TIGR01993 Pyr-5-nucltdase pyri 79.5 3.7 7.9E-05 42.4 6.0 95 665-781 84-180 (184)
168 COG0241 HisB Histidinol phosph 78.4 7.3 0.00016 40.3 7.5 97 666-781 32-144 (181)
169 PRK10725 fructose-1-P/6-phosph 78.3 4.8 0.0001 41.6 6.4 89 667-781 90-181 (188)
170 TIGR01452 PGP_euk phosphoglyco 77.2 18 0.00039 40.3 11.0 44 663-706 16-62 (279)
171 TIGR01684 viral_ppase viral ph 74.2 6.6 0.00014 43.6 6.2 41 666-706 146-187 (301)
172 PF03767 Acid_phosphat_B: HAD 73.7 6.2 0.00013 42.6 5.9 89 664-774 114-207 (229)
173 TIGR01680 Veg_Stor_Prot vegeta 70.9 23 0.00049 39.1 9.3 87 663-772 143-235 (275)
174 COG0637 Predicted phosphatase/ 70.1 10 0.00022 40.7 6.5 98 664-782 85-182 (221)
175 PHA03398 viral phosphatase sup 68.8 10 0.00022 42.2 6.2 41 666-706 148-189 (303)
176 PLN02151 trehalose-phosphatase 66.5 82 0.0018 36.3 13.1 34 666-700 121-154 (354)
177 COG3700 AphA Acid phosphatase 65.6 15 0.00032 37.4 5.9 86 666-780 115-205 (237)
178 TIGR02251 HIF-SF_euk Dullard-l 64.5 4.3 9.4E-05 41.3 2.2 40 665-705 42-81 (162)
179 PRK10748 flavin mononucleotide 64.3 18 0.00039 39.2 7.1 91 665-785 113-207 (238)
180 PLN02177 glycerol-3-phosphate 63.3 33 0.00072 41.5 9.6 99 666-786 111-215 (497)
181 PRK10444 UMP phosphatase; Prov 62.8 7.5 0.00016 42.5 3.8 45 658-702 10-54 (248)
182 PRK14194 bifunctional 5,10-met 60.3 36 0.00079 38.2 8.6 64 739-802 137-209 (301)
183 PTZ00445 p36-lilke protein; Pr 60.1 15 0.00033 38.8 5.2 64 607-693 28-103 (219)
184 TIGR01517 ATPase-IIB_Ca plasma 59.9 1.6E+02 0.0035 38.9 15.8 176 237-431 185-360 (941)
185 TIGR01457 HAD-SF-IIA-hyp2 HAD- 58.4 15 0.00033 40.1 5.3 45 662-706 14-61 (249)
186 TIGR01689 EcbF-BcbF capsule bi 53.4 17 0.00036 35.4 4.0 33 664-696 23-55 (126)
187 TIGR01493 HAD-SF-IA-v2 Haloaci 53.1 13 0.00028 37.8 3.5 84 665-778 90-175 (175)
188 PF06570 DUF1129: Protein of u 52.1 1.9E+02 0.0042 30.6 12.2 18 1001-1018 181-198 (206)
189 PF00389 2-Hacid_dh: D-isomer 52.1 2E+02 0.0043 27.8 11.5 78 739-826 42-123 (133)
190 TIGR01663 PNK-3'Pase polynucle 49.8 46 0.00099 40.5 7.8 40 666-705 198-249 (526)
191 PRK14188 bifunctional 5,10-met 49.7 71 0.0015 35.9 8.8 63 739-801 136-207 (296)
192 PF13380 CoA_binding_2: CoA bi 48.4 20 0.00044 34.2 3.7 40 666-705 64-104 (116)
193 PRK14169 bifunctional 5,10-met 46.4 88 0.0019 34.9 8.7 80 739-819 134-225 (282)
194 cd02071 MM_CoA_mut_B12_BD meth 45.6 75 0.0016 30.5 7.2 83 615-706 21-105 (122)
195 COG0474 MgtA Cation transport 45.5 8.1E+02 0.018 32.3 18.7 204 200-431 113-332 (917)
196 PRK14170 bifunctional 5,10-met 44.1 85 0.0019 35.0 8.2 81 739-819 135-226 (284)
197 TIGR01501 MthylAspMutase methy 43.9 1.1E+02 0.0024 30.1 8.1 81 616-705 24-112 (134)
198 PF05822 UMPH-1: Pyrimidine 5' 42.8 88 0.0019 34.1 7.8 134 664-812 89-241 (246)
199 COG1916 Uncharacterized homolo 42.7 1.9E+02 0.0042 33.1 10.5 103 665-769 96-216 (388)
200 PRK14174 bifunctional 5,10-met 42.6 99 0.0021 34.8 8.4 64 739-802 137-213 (295)
201 TIGR01647 ATPase-IIIA_H plasma 41.1 2.7E+02 0.0058 35.8 13.2 101 200-310 58-163 (755)
202 PF02358 Trehalose_PPase: Treh 39.9 87 0.0019 33.7 7.5 63 739-801 157-232 (235)
203 COG3329 Predicted permease [Ge 39.1 1.3E+02 0.0029 33.5 8.3 81 134-214 185-267 (372)
204 TIGR02244 HAD-IG-Ncltidse HAD 39.1 73 0.0016 36.6 6.9 105 667-779 186-316 (343)
205 TIGR01522 ATPase-IIA2_Ca golgi 38.7 8.2E+02 0.018 32.1 17.3 197 205-430 95-307 (884)
206 PRK14190 bifunctional 5,10-met 38.5 1.3E+02 0.0028 33.6 8.5 79 738-819 135-227 (284)
207 PRK14191 bifunctional 5,10-met 36.8 1.5E+02 0.0031 33.3 8.5 63 739-802 135-207 (285)
208 COG0647 NagD Predicted sugar p 36.7 40 0.00086 37.3 4.1 45 658-702 17-61 (269)
209 PRK14189 bifunctional 5,10-met 36.7 2.8E+02 0.0062 31.0 10.8 64 739-802 136-208 (285)
210 PRK14182 bifunctional 5,10-met 36.5 1.5E+02 0.0032 33.2 8.5 79 740-818 136-225 (282)
211 PRK14179 bifunctional 5,10-met 36.4 4.9E+02 0.011 29.2 12.6 63 739-801 136-207 (284)
212 COG1011 Predicted hydrolase (H 36.1 1.2E+02 0.0026 32.0 7.8 121 665-812 99-226 (229)
213 PRK14166 bifunctional 5,10-met 34.9 1.7E+02 0.0036 32.7 8.6 80 739-819 135-226 (282)
214 PRK14167 bifunctional 5,10-met 34.4 1.6E+02 0.0035 33.1 8.4 78 739-819 135-230 (297)
215 TIGR01494 ATPase_P-type ATPase 34.1 3.4E+02 0.0074 32.9 12.1 157 237-430 53-213 (499)
216 PRK14184 bifunctional 5,10-met 33.4 1.8E+02 0.0038 32.6 8.5 79 739-819 135-230 (286)
217 COG0078 ArgF Ornithine carbamo 31.8 2E+02 0.0043 32.3 8.4 24 682-705 100-123 (310)
218 PF03120 DNA_ligase_OB: NAD-de 31.7 23 0.0005 31.6 1.1 20 246-265 47-67 (82)
219 PRK14186 bifunctional 5,10-met 31.3 2.2E+02 0.0048 32.0 8.9 77 740-819 137-227 (297)
220 PRK00652 lpxK tetraacyldisacch 30.7 1E+02 0.0023 35.1 6.4 59 749-807 69-154 (325)
221 PRK02261 methylaspartate mutas 30.3 2.6E+02 0.0055 27.6 8.3 82 615-705 25-114 (137)
222 TIGR01106 ATPase-IIC_X-K sodiu 29.8 9.9E+02 0.021 31.9 16.1 195 204-427 118-324 (997)
223 TIGR02250 FCP1_euk FCP1-like p 29.7 78 0.0017 32.0 4.7 40 665-705 58-97 (156)
224 PLN02897 tetrahydrofolate dehy 29.7 2.6E+02 0.0056 32.1 9.1 80 739-819 192-283 (345)
225 cd02067 B12-binding B12 bindin 29.7 1.3E+02 0.0029 28.4 6.1 82 615-705 21-104 (119)
226 TIGR01456 CECR5 HAD-superfamil 29.7 1.8E+02 0.0039 33.0 8.2 48 658-705 9-64 (321)
227 TIGR00381 cdhD CO dehydrogenas 29.3 3.3E+02 0.0072 31.7 9.9 137 669-824 144-296 (389)
228 PF02401 LYTB: LytB protein; 29.1 1.7E+02 0.0038 32.6 7.6 175 578-789 71-266 (281)
229 PLN02591 tryptophan synthase 27.9 4.3E+02 0.0094 28.9 10.3 86 668-777 118-209 (250)
230 PRK14172 bifunctional 5,10-met 27.6 6.2E+02 0.014 28.2 11.5 81 739-820 136-228 (278)
231 PF12710 HAD: haloacid dehalog 27.4 28 0.00061 35.7 1.1 14 454-467 1-14 (192)
232 TIGR00640 acid_CoA_mut_C methy 27.4 2E+02 0.0043 28.2 6.9 83 615-706 24-108 (132)
233 PRK14175 bifunctional 5,10-met 27.0 98 0.0021 34.6 5.2 63 739-802 136-208 (286)
234 cd05017 SIS_PGI_PMI_1 The memb 26.4 1.1E+02 0.0025 28.9 5.0 40 664-705 53-92 (119)
235 PRK14177 bifunctional 5,10-met 25.9 7.3E+02 0.016 27.8 11.7 92 728-820 126-229 (284)
236 COG1609 PurR Transcriptional r 25.5 8.4E+02 0.018 27.7 12.8 140 601-769 26-185 (333)
237 cd00860 ThrRS_anticodon ThrRS 25.2 1.5E+02 0.0033 26.0 5.4 47 659-705 6-53 (91)
238 PF06506 PrpR_N: Propionate ca 25.1 2.8E+02 0.0061 28.4 8.0 107 669-824 65-172 (176)
239 PF03129 HGTP_anticodon: Antic 24.7 1.8E+02 0.0039 26.0 5.8 48 658-705 3-54 (94)
240 COG0272 Lig NAD-dependent DNA 24.7 1.2E+02 0.0026 37.7 5.7 74 245-330 364-439 (667)
241 TIGR00262 trpA tryptophan synt 24.6 4.4E+02 0.0095 29.0 9.8 42 662-703 121-164 (256)
242 PF12304 BCLP: Beta-casein lik 24.5 3.6E+02 0.0079 27.9 8.1 91 324-435 23-113 (188)
243 PF01455 HupF_HypC: HupF/HypC 23.8 1.6E+02 0.0034 25.4 4.8 32 230-261 16-50 (68)
244 PRK14183 bifunctional 5,10-met 23.7 3.6E+02 0.0078 30.1 8.8 79 739-819 135-226 (281)
245 COG1877 OtsB Trehalose-6-phosp 23.4 4.2E+02 0.0092 29.3 9.2 126 658-785 33-228 (266)
246 PRK01045 ispH 4-hydroxy-3-meth 23.3 1.1E+03 0.023 26.7 12.5 177 574-785 69-264 (298)
247 TIGR01657 P-ATPase-V P-type AT 23.3 1.9E+03 0.042 29.4 19.2 36 250-285 235-273 (1054)
248 PRK01906 tetraacyldisaccharide 23.2 1.5E+02 0.0033 34.0 6.0 59 749-807 76-161 (338)
249 PF05297 Herpes_LMP1: Herpesvi 22.5 29 0.00062 37.8 0.0 7 883-889 13-19 (381)
250 PRK14042 pyruvate carboxylase 22.3 3.5E+02 0.0076 33.6 9.2 127 649-782 73-223 (596)
251 PF07302 AroM: AroM protein; 22.3 94 0.002 33.3 3.8 30 663-692 69-100 (221)
252 PRK15424 propionate catabolism 22.2 7.4E+02 0.016 30.4 11.9 70 669-770 95-165 (538)
253 PRK08508 biotin synthase; Prov 21.5 4.5E+02 0.0096 29.2 9.2 20 743-762 134-153 (279)
254 PF06609 TRI12: Fungal trichot 21.5 1.3E+03 0.029 28.7 13.9 18 1004-1021 360-377 (599)
255 PF12689 Acid_PPase: Acid Phos 21.4 1.4E+02 0.0031 30.6 4.8 41 665-705 45-86 (169)
256 PF15584 Imm44: Immunity prote 21.1 40 0.00087 30.6 0.6 19 251-269 13-31 (94)
257 PLN02389 biotin synthase 20.9 8.4E+02 0.018 28.5 11.6 78 667-762 152-229 (379)
258 PRK14187 bifunctional 5,10-met 20.9 4.8E+02 0.01 29.4 9.1 79 739-818 138-228 (294)
259 CHL00200 trpA tryptophan synth 20.8 5.5E+02 0.012 28.4 9.5 41 663-703 126-168 (263)
260 PF02219 MTHFR: Methylenetetra 20.4 3E+02 0.0064 30.7 7.6 44 651-694 68-112 (287)
No 1
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.5e-239 Score=2021.53 Aligned_cols=993 Identities=52% Similarity=0.826 Sum_probs=920.2
Q ss_pred ccchHHHHhHHHHhhhhhchhhhhhcccccccc----ccccccccc---ccccccCCCCCCCccccccccCCCCCCCCCH
Q 001616 21 STLTKAQKRWRLAYWTIYSFRAMLSVLPKGRLL----SAEILTSHD---YIALDVEPEPSSSHDEANKLVSNSIDPDMDG 93 (1044)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (1044)
+++.++++|||.|..+++++|||++..+.++.+ .++..++.. ..+..+.+....+ ...-++++
T Consensus 13 n~~~~~~~~~~~a~~~~~~~~~~~~~~~l~~~~~~~~~r~~~r~~~~~~~a~~~~~~~~~~~----------e~~~~i~~ 82 (1034)
T KOG0204|consen 13 NSSIEALQRWRLAYIVLEASRRFRFGASLKKLRELMEPRRKIRSAVLVSKAAALFIDAGSRT----------EYTLGIGA 82 (1034)
T ss_pred cchhhhhhhhhhhhhhcccchhhccccCHHHHHHHHHHHhhhhhhhcccchhhhhhcccccc----------ccccccCH
Confidence 577899999999999999999999987532111 111222322 1122333332211 11237899
Q ss_pred HHHHHHhcCCChhHHHhhCCHHHHHHHhCCCcCCCCCcCHHHHHHHHhhcCCCcCCCCCCCcHHHHHHHHhhhhHHHHHH
Q 001616 94 IRLAEMVKNKDSHTLSLLGGVEGVANALGTNPEYGINGNDEDVSRRSQLFGANTYHKPPPKGLLHFVLEAFKDTTILILL 173 (1044)
Q Consensus 94 ~~l~~~~~~~~~~~l~~~ggv~~l~~~l~t~~~~GL~~~~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~ill 173 (1044)
|+|.++++++|.+.|+++||++|||++|+||+..||+.+++++.+||+.||+|++|++++|+||+|+||+|+|.++++|+
T Consensus 83 e~l~~i~~~~~~~~L~~~gGv~gL~~~LKt~~~~Gi~~~~~el~~Rr~~fG~N~~p~k~~K~Fl~fvweA~qD~TLiIL~ 162 (1034)
T KOG0204|consen 83 EELVKIVKEHDLKALNAYGGVEGLCKKLKTDPNEGISGEDDELERRRKIFGSNTYPEKPPKGFLRFVWEALQDVTLIILM 162 (1034)
T ss_pred HHHHHHhhccchhhhhhccCHHHHHHHhccCcccCCCCChHHHHHHHHhcCCCCCCCCCCccHHHHHHHHhccchHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhccccCCCCccccchhHHHHHHHHHHHHhHHHHHHHHHHHHHhhcccCCceEEEEeCCeEEEEeecccccCc
Q 001616 174 VCAALSLGFGIKEHGAEEGWYEGGSIFVAVFLVIVVSAFSNFRQARQFDKLSKISNNIKVEVVREARRLQISIFDLVVGD 253 (1044)
Q Consensus 174 v~a~lsl~~gi~~~g~~~~~~d~~~i~~~v~lv~~v~a~~~~~~~~~~~~l~~~~~~~~v~ViR~G~~~~I~~~dLvvGD 253 (1044)
+||++|+++|++++|.++|||||++|+++++++++++|++||+|++||++|++++++.+++|+|||++++|++.||||||
T Consensus 163 vaAvvSl~lgi~~~g~~~GW~eG~aI~~sV~~VV~VtA~nDy~qe~QF~~L~~~k~~~k~~ViR~G~r~~isI~diVVGD 242 (1034)
T KOG0204|consen 163 VAAVVSLGLGIYTPGIEDGWIEGVAILLSVILVVLVTAVNDYRQELQFRKLQKEKRNIKFQVIRGGRRQQISIYDLVVGD 242 (1034)
T ss_pred HHHHHHHhhhhccCCCCcccccchhheeeEEEEEEEeecchhHHhhhhhhhhhhhhceEEEEEECCEEEEEEEeeeeecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCeeeccEEEEecCceeeecCCCCCCCCceeecCCCCceeeecceEeeCceEEEEEEecccchhHHHHhhcCCC
Q 001616 254 IVFLKIGDQIPADGLFLDGHSLQVDESSMTGESDHVEVDSTNNPFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSSISSD 333 (1044)
Q Consensus 254 IV~l~~Gd~VPADgill~g~~l~VDES~LTGEs~pv~k~~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~gki~~~~~~~ 333 (1044)
|++|+.||+|||||++++|++|.+|||+|||||++++|....+|||+|||++++|+|+|+||+||+||+||++|..+.+.
T Consensus 243 Iv~lk~GDqvPADGvli~gn~L~iDESSlTGESd~v~k~~~~dPfLlSGTkv~eGsgkMlVTaVGmnt~wG~~m~~l~~~ 322 (1034)
T KOG0204|consen 243 IVQLKIGDQVPADGVLIQGNSLKIDESSLTGESDHVQKSLDKDPFLLSGTKVMEGSGKMLVTAVGMNTQWGIIMTLLGAG 322 (1034)
T ss_pred EEEeecCCccccceEEEeccceeEecccccCCCcceeccCCCCCeEeecceeecCcceEEEEEeeecchHhhHHHhhhcC
Confidence 99999999999999999999999999999999999999988999999999999999999999999999999999999999
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccccCCCCCCcchhHHHHHHHHHHHHHHHHHHh
Q 001616 334 SNERTPLQARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAAAVTIVVVAI 413 (1044)
Q Consensus 334 ~~~~tplq~~l~~la~~i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~ilvvav 413 (1044)
.+++||||.+|+++|..|+++|+.+|+++++++++||+.+....+.+. .| ......++.++++|..+++++|||+
T Consensus 323 ~~e~tpLQ~kL~~lA~~Igk~Gl~~A~~~~~VL~~r~~~~~~~~~~~~-~~----~~~~~~~~~~v~~f~i~VTilVVAV 397 (1034)
T KOG0204|consen 323 GEEETPLQVKLNGLATQIGKIGLLFAALTFIVLVIRFFIGKTKIEGGT-GT----TWSDEYIQEFVKFFIIAVTILVVAV 397 (1034)
T ss_pred CCcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeeecCCCC-Cc----cccHHHHHHHHHHhhheeEEEEEEC
Confidence 999999999999999999999999999999999999999887655432 11 2234566799999999999999999
Q ss_pred cchhHHHHHHHHHHHHHhhccccceeccchhhhcccCeeEEeeCcccccccCceEEEEEEecccccccccc--ccCChHH
Q 001616 414 PEGLPLAVTLTLAYSMKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKFWLGQESIVQETY--CKIASSI 491 (1044)
Q Consensus 414 P~gLplavtl~la~~~~~m~k~~~lvr~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~--~~~~~~~ 491 (1044)
|||||||||++|||+++|||+|++|||+++||||||++|+||+|||||||+|+|+|++.|++++.+..+.. +.+++.+
T Consensus 398 PEGLPLAVTLsLAys~kkMmkD~~LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~~~~~~~~~k~~~~~~~~l~~~~ 477 (1034)
T KOG0204|consen 398 PEGLPLAVTLSLAYSMKKMMKDNNLVRHLDACETMGSATAICSDKTGTLTTNRMTVVQSYIGSEHYKVNSPKSSNLPPSL 477 (1034)
T ss_pred CCCccHHHHHHHHHHHHHHhcchhHHHHhHHHhhcCCceEEEecCcCceEeeeEEEEeeeeccccccccCcccccCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999988875333 4689999
Q ss_pred HHHHHHHHhhcCCccccccCCCCCcceecCChhHHHHHHHHHHHcCCChHHhhhcccEEEEecCCCCCceEEEEEEecCC
Q 001616 492 RDLFHQGVGLNTTGSVSKLKPGSSVAEFSGSPTEKAVLSWAVLEMGMEMDKVKQKYSILHVETFNSEKKRSGVLIRRKAD 571 (1044)
Q Consensus 492 ~~~l~~~i~~n~~~~~~~~~~~~~~~~~~gsp~e~All~~a~~~~g~~~~~~~~~~~il~~~pF~s~rkrmsvvv~~~~~ 571 (1044)
.+++.++++.|+++++..++.+...+++.|||||+|||.|+. ++|++++..|.+.++++++||||+|||||++++.+++
T Consensus 478 ~~ll~~gI~~Nt~g~v~~~~~~g~~~~~~GspTE~AlL~f~~-~LG~~~~~~R~e~~v~kv~~FNS~kK~~gvvi~~~~~ 556 (1034)
T KOG0204|consen 478 LDLLLQGIAQNTTGSVVKPEKGGEQPEQLGSPTECALLGFGL-KLGMDFQDVRPEEKVVKVYPFNSVKKRMGVVIKLPDG 556 (1034)
T ss_pred HHHHHHHHhhcCCCeEEecCCCCcCccccCCHHHHHHHHHHH-HhCcchHhhcchhheeEEeccCcccceeeEEEEcCCC
Confidence 999999999999999988644445889999999999999999 7999999999999999999999999999999998888
Q ss_pred CeEEEEecCcHHHHHHhcccccccCCeeecCChhhHHHHHHHHHHHHhcccceeeeeeeecCchhhcccchHHHhhhhcc
Q 001616 572 NTTHIHWKGAAEIILAMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAYNNDVKARQRLKE 651 (1044)
Q Consensus 572 ~~~~~~~KGA~e~Il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~~A~k~l~~~~~~~~~~~~~~~~~~e 651 (1044)
+.| +|||||+|+|+.+|+++++++|+..+++++.+..+++.|+.||++||||+|+|||++.+...+.+ ....++.++
T Consensus 557 ~~y-~~~KGAsEiVL~~C~~~~~~~g~~~~~~e~~~~~~~~~Ie~mA~~~LRti~lAy~df~~~~~~~~--~~~~~~~~~ 633 (1034)
T KOG0204|consen 557 GHY-VHWKGASEIVLKSCEYYIDSNGELVPFNEDDRKSFKDVIEPMASEGLRTICLAYRDFVAGPDEEP--SWDNEELPE 633 (1034)
T ss_pred CeE-EEEcChHHHHHHhhhheECCCCCEeeCCHHHHHHHHHHHHHHHHhhhheeeEEeeccccCCCCCC--CccccccCC
Confidence 765 99999999999999999999999999999999999999999999999999999999764311111 012245678
Q ss_pred cCeEEEEEecccCCCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCcccccccccceeecchhhhcCCHHHHH
Q 001616 652 EGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERI 731 (1044)
Q Consensus 652 ~~l~llG~vgi~D~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~ 731 (1044)
.||+++|++||+||+||||++||+.||+|||+|+|+||||..||+|||.+|||++++. +..++||++|++++++|++
T Consensus 634 ~~lt~laivGIkDPvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~~---d~~~lEG~eFr~~s~ee~~ 710 (1034)
T KOG0204|consen 634 GGLTLLAIVGIKDPVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARECGILTPGG---DFLALEGKEFRELSQEERD 710 (1034)
T ss_pred CCeEEEEEeeccCCCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCCC---ccceecchhhhhcCHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999754 3589999999999999999
Q ss_pred HHhccccEEeecChhhHHHHHHHHHhcCCEEEEEcCCcCCHHHHhhCCcceeeCCCchHHHhhccCEEEccCChhHHHHH
Q 001616 732 QKVDKIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATV 811 (1044)
Q Consensus 732 ~~~~~~~V~ar~sP~~K~~lV~~lq~~g~vVa~~GDG~NDapaLk~AdVGiamg~~gt~vAk~aaDivl~dd~f~~I~~~ 811 (1044)
+++|+++|+||+||.||+.+|+.|+++||+||+||||+||+||||+||||+|||++|||+|||+|||||+||||++|+++
T Consensus 711 ~i~pkl~VlARSSP~DK~lLVk~L~~~g~VVAVTGDGTNDaPALkeADVGlAMGIaGTeVAKEaSDIIi~DDNFssIVk~ 790 (1034)
T KOG0204|consen 711 KIWPKLRVLARSSPNDKHLLVKGLIKQGEVVAVTGDGTNDAPALKEADVGLAMGIAGTEVAKEASDIIILDDNFSSIVKA 790 (1034)
T ss_pred hhhhhheeeecCCCchHHHHHHHHHhcCcEEEEecCCCCCchhhhhcccchhccccchhhhhhhCCeEEEcCchHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHhhhhhHHHHHHhccCCCCcccccCCCCCCCC
Q 001616 812 LRWGRCVYTNIQKFIQFQLTVNVAALVINFIAAVSAGEVPLTAVQLLWVNLIMDTLGALALATDRPTDELMQRPPVGRTE 891 (1044)
Q Consensus 812 i~~GR~~~~ni~k~i~f~l~~nv~~~~~~~~~~~~~~~~pl~~~qlL~~nli~d~l~alala~e~p~~~lm~~~P~~~~~ 891 (1044)
++|||++|+||+||+|||||+|++|++++|++++..+.+||+++||||+|||||+|+|||||||||+++||+|+|++|++
T Consensus 791 v~WGR~VY~nIqKFiQFQLTVNVvAliv~fv~A~~~~dsPLtAVQlLWVNLIMDTLgALALATepPt~~Lm~RkP~GR~~ 870 (1034)
T KOG0204|consen 791 VKWGRNVYDNIQKFLQFQLTVNVVALIVNFVSACATGDSPLTAVQLLWVNLIMDTLGALALATEPPTDELMKRKPVGRTK 870 (1034)
T ss_pred HHhhhHHHHHHHHhheeEEEEEEEeehhhhhhhhhcCCccHHHHHHHHHHHHHHHHHHHHhccCCCChHHhcCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccHHHHHHHHHHHHHHHHHHHHHHHhcccccCCC------cccccchhhhHHHHHHHHHHhhhccccccccccccccc
Q 001616 892 PLITNIMWRNLLSQALYQITILLILQFKGESIFNVS------PEVNDTLIFNTFVFCQVFNEFNARKLEKRNVFKGIHKN 965 (1044)
Q Consensus 892 ~li~~~~~~~i~~~~~~q~~v~~~l~~~~~~~~~~~------~~~~~t~~f~~~v~~q~fn~~n~r~~~~~~~f~~~~~n 965 (1044)
||||+.||+||++|++||++++++++|.|..+|+.+ +..++|++||+|||||+||+||+|++++.|+|+|+++|
T Consensus 871 ~LIt~tMwknil~qa~YQl~vl~iL~F~G~~if~~~~~~~~~~~~~nTiIFNtFV~~qvFNEinaRki~~~NvFkgi~~N 950 (1034)
T KOG0204|consen 871 PLITRTMWKNILGQAVYQLIVLFILNFAGKSIFGLNGPLHSPPSVHNTIIFNTFVFCQVFNEINARKIDERNVFKGIFRN 950 (1034)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHhcchhhhccCCCCCCchhhheeeehhHHHHHHHHHHHhhcchhHHhHHHHHhcC
Confidence 999999999999999999999999999999999663 45789999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhHhhccCCCChHHHHHHHHHHHHHHHHHHHhhhcccCCchhhhHHHHHh
Q 001616 966 KLFLGIIGITVVLQVVMVEFLKKFADTERLNWQQWLACIAMAAFTWPIGWAVKFIPVTEKPIFSYLKRLR 1035 (1044)
Q Consensus 966 ~~f~~~i~~~~~~qv~~v~~~~~~f~~~~l~~~~w~~~i~~~~~~~~~~~~~k~i~~~~~~~~~~~~~~~ 1035 (1044)
++|++++.+++++|+++++|+|.+|+++||+|.||++|+++|+++|++++++|++|++..|+..+.+..+
T Consensus 951 ~~F~~ii~~T~v~QviIveF~g~~~st~~L~~~qWl~ci~~g~~sl~~g~~ik~iP~~~~~~~~~~~~~~ 1020 (1034)
T KOG0204|consen 951 RLFCVIITITVVSQVIIVEFGGAFFSTTPLSLTQWLWCIFIGVLSLPWGQLLKCIPVSSLPKLKYAGLGG 1020 (1034)
T ss_pred ceEEEEeeeeeehhhhhhhhcCcceeeecccHHHHHHHHHHHHHHHHHHHHheeccccccccceeeccCc
Confidence 9999999999999999999999999999999999999999999999999999999999888777665443
No 2
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.1e-163 Score=1397.94 Aligned_cols=879 Identities=33% Similarity=0.505 Sum_probs=762.4
Q ss_pred CHHHHHHHhCCCcCCCCCcCHHHHHHHHhhcCCCcCCCCCCCcHHHHHHHHhhhhHHHHHHHHHHHHHhhccccCCCCcc
Q 001616 113 GVEGVANALGTNPEYGINGNDEDVSRRSQLFGANTYHKPPPKGLLHFVLEAFKDTTILILLVCAALSLGFGIKEHGAEEG 192 (1044)
Q Consensus 113 gv~~l~~~l~t~~~~GL~~~~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~illv~a~lsl~~gi~~~g~~~~ 192 (1044)
.+++.+..|.|++++||+.+| +.+||+.||.|+++....+++|+.+++||.|+...+|+++|++|++++ .
T Consensus 8 ~v~e~~~~f~t~~~~GLt~~e--v~~r~~~yG~Nel~~ee~~~~wk~vLeQF~n~Li~iLL~sA~ISfvl~--------~ 77 (972)
T KOG0202|consen 8 SVSEVLAEFGTDLEEGLTSDE--VTRRRKKYGENELPAEEGESLWKLVLEQFDNPLILILLLSAAISFVLA--------D 77 (972)
T ss_pred cHHHHHHHhCcCcccCCCHHH--HHHHHHhcCCccCccccCCcHHHHHHHHHHhHHHHHHHHHHHHHHHHH--------h
Confidence 588899999999999999976 999999999999999999999999999999999999999999999997 4
Q ss_pred ccchhHHHHHHHHHHHHhHHHHHHHHHHHHHhhcccCCceEEEEeCCeEEEEeecccccCcEEEeCCCCeeeccEEEEec
Q 001616 193 WYEGGSIFVAVFLVIVVSAFSNFRQARQFDKLSKISNNIKVEVVREARRLQISIFDLVVGDIVFLKIGDQIPADGLFLDG 272 (1044)
Q Consensus 193 ~~d~~~i~~~v~lv~~v~a~~~~~~~~~~~~l~~~~~~~~v~ViR~G~~~~I~~~dLvvGDIV~l~~Gd~VPADgill~g 272 (1044)
|.|+++|.+++++++.|..+++|+.++..++|++. .+..++|+|+|+.+.++++||||||||.|+.||+||||.++++.
T Consensus 78 ~~e~~vI~liiv~nvtVG~~QEy~aEkalEaLk~l-~p~~~~V~R~gk~~~i~A~eLVPGDiV~l~vGDkVPADlRl~e~ 156 (972)
T KOG0202|consen 78 FDEPFVITLIIVINVTVGFVQEYNAEKALEALKEL-VPPMAHVLRSGKLQHILARELVPGDIVELKVGDKIPADLRLIEA 156 (972)
T ss_pred cccceeeeeeeeeeeeeeeeeehhhHHHHHHHHhc-CCccceEEecCcccceehhccCCCCEEEEecCCccccceeEEee
Confidence 77999999999999999999999999999999866 56799999999999999999999999999999999999999999
Q ss_pred CceeeecCCCCCCCCceeecCC------------CCceeeecceEeeCceEEEEEEecccchhHHHHhhcCCCCCCCChh
Q 001616 273 HSLQVDESSMTGESDHVEVDST------------NNPFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSSISSDSNERTPL 340 (1044)
Q Consensus 273 ~~l~VDES~LTGEs~pv~k~~~------------~~~~l~sGt~v~~G~~~~~V~~vG~~T~~gki~~~~~~~~~~~tpl 340 (1044)
.++.||||+|||||.|+.|.++ +.+++|+||.|..|.++++|++||.||++|++...+.+.++.+|||
T Consensus 157 ~sl~iDeS~LTGEs~pv~K~t~~v~~~~~~~~~dk~NiaFsGT~V~~G~a~GIVi~TG~nTeiG~I~~~m~~~e~~kTPL 236 (972)
T KOG0202|consen 157 KSLRIDESSLTGESEPVSKDTDAVPKDENADVQDKKNIAFSGTLVVAGRAKGIVIGTGLNTEIGKIFKMMQATESPKTPL 236 (972)
T ss_pred eeeeeecccccCCcccccccCccccCCCCCccccceeeEeecceeecCceeEEEEeccccchHHHHHHHHhccCCCCCcH
Confidence 9999999999999999999642 4578999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccccCCCCCCcchhHHHHHHHHHHHHHHHHHHhcchhHHH
Q 001616 341 QARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAAAVTIVVVAIPEGLPLA 420 (1044)
Q Consensus 341 q~~l~~la~~i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~ilvvavP~gLpla 420 (1044)
|++++.+.+.+.++..++++.+.++- +.++... ......|....++|.+++++.|+|||||||..
T Consensus 237 qk~ld~~G~qLs~~is~i~v~v~~~n-ig~f~~p--------------~~~g~~fk~~~~~f~IaVsLAVAAIPEGLPaV 301 (972)
T KOG0202|consen 237 QKKLDEFGKQLSKVISFICVGVWLLN-IGHFLDP--------------VHGGSWFKGALYYFKIAVSLAVAAIPEGLPAV 301 (972)
T ss_pred HHHHHHHHHHHHHHheehhhhHHHhh-hhhhccc--------------cccccchhchhhhhhHHHHHHHHhccCCCcch
Confidence 99999999998865444444333221 1222200 00111233778899999999999999999999
Q ss_pred HHHHHHHHHHhhccccceeccchhhhcccCeeEEeeCcccccccCceEEEEEEecccccccc------c-----------
Q 001616 421 VTLTLAYSMKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKFWLGQESIVQE------T----------- 483 (1044)
Q Consensus 421 vtl~la~~~~~m~k~~~lvr~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~------~----------- 483 (1044)
+|.+||.+.+||+|++++||++.++||||.+++||+|||||||+|+|++.++|+.+...... .
T Consensus 302 vT~tLALG~~rMakknaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~~~f~~tg~ty~~~g~v~~ 381 (972)
T KOG0202|consen 302 VTTTLALGTRRMAKKNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATVDEFNPTGTTYSPEGEVFK 381 (972)
T ss_pred hhhhHHHhHHHHHhhhhhhhcccchhhccceeEEecCCCCcccccceEEEEEEecccccccccccccCCceeCCCCceEe
Confidence 99999999999999999999999999999999999999999999999999999875422111 0
Q ss_pred -------cccCChHHHHHHHHHHhhcCCccccccCCCCCcceecCChhHHHHHHHHHHHcCCChHH--------------
Q 001616 484 -------YCKIASSIRDLFHQGVGLNTTGSVSKLKPGSSVAEFSGSPTEKAVLSWAVLEMGMEMDK-------------- 542 (1044)
Q Consensus 484 -------~~~~~~~~~~~l~~~i~~n~~~~~~~~~~~~~~~~~~gsp~e~All~~a~~~~g~~~~~-------------- 542 (1044)
.....+.+.+++ +..++|+.+.+... +.+.++..|.|||.||..++. ++|+.-..
T Consensus 382 ~~~~~~~~~~~~~~l~~l~-~i~~lCNda~v~~~--~~~~~~~~G~pTE~AL~vlae-Km~l~~~~~~~~s~~~~~~c~~ 457 (972)
T KOG0202|consen 382 DGLYEKDKAGDNDLLQELA-EICALCNDATVEYN--DADCYEKVGEPTEGALIVLAE-KMGLPGTRSTNLSNEEASACNR 457 (972)
T ss_pred cCccccccccccHHHHHHH-HHHHhhhhhhhhcC--chhhHHhcCCchHHHHHHHHH-HcCCCcchhhcccccccccchh
Confidence 011223344444 44556666666542 226677799999999999998 88765322
Q ss_pred -hhhcccEEEEecCCCCCceEEEEEEecCC-CeEEEEecCcHHHHHHhcccccccCC-eeecCChhhHHHHHHHHHHHHh
Q 001616 543 -VKQKYSILHVETFNSEKKRSGVLIRRKAD-NTTHIHWKGAAEIILAMCSHYYESNG-VIKSMDGNGRSQMENIIHGMAA 619 (1044)
Q Consensus 543 -~~~~~~il~~~pF~s~rkrmsvvv~~~~~-~~~~~~~KGA~e~Il~~c~~~~~~~g-~~~~l~~~~~~~~~~~i~~~a~ 619 (1044)
..+.++.+.++||+|+||+|+|.+..+.+ ..+.+|+|||+|.|+++|++++..+| ...||++..|+.+.+...+|++
T Consensus 458 ~~~~~~~~~~elpFssdrK~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il~~~~~~g~ 537 (972)
T KOG0202|consen 458 VYSRLFKKIAELPFSSDRKSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETILANVYEMGS 537 (972)
T ss_pred HHHHhhhheeEeecccccceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHHHHHHHHhh
Confidence 23345667999999999999999987655 34789999999999999998888777 5599999999999999999999
Q ss_pred cccceeeeeeeecCc-hhhcccchHHHhhhhcccCeEEEEEecccCCCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHH
Q 001616 620 SSLRCIAFAYKQVSE-EETAYNNDVKARQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAI 698 (1044)
Q Consensus 620 ~glR~l~~A~k~l~~-~~~~~~~~~~~~~~~~e~~l~llG~vgi~D~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aI 698 (1044)
+|||||++|+++.+. ..+........++...|+||+|+|++||.||||++|+++|+.|++|||+|+|+||||..||++|
T Consensus 538 ~gLRvLalA~~~~~~~~~~~~~l~~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI 617 (972)
T KOG0202|consen 538 EGLRVLALASKDSPGQVPDDQDLNDTSNRATAESDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMITGDNKETAEAI 617 (972)
T ss_pred ccceEEEEEccCCcccChhhhhhcccccccccccceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHH
Confidence 999999999998763 1111111111234567999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCcccccccccceeecchhhhcCCHHHHHHHhccccEEeecChhhHHHHHHHHHhcCCEEEEEcCCcCCHHHHhhC
Q 001616 699 ATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEA 778 (1044)
Q Consensus 699 A~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~ar~sP~~K~~lV~~lq~~g~vVa~~GDG~NDapaLk~A 778 (1044)
|+++||...+.+ -...+++|.+|+.++++++.+...+..||||++|.+|.+||+.||++|++|||||||+|||||||.|
T Consensus 618 ~r~iGi~~~~ed-~~~~~~TG~efD~ls~~~~~~~~~~~~vFaR~~P~HK~kIVeaLq~~geivAMTGDGVNDApALK~A 696 (972)
T KOG0202|consen 618 AREIGIFSEDED-VSSMALTGSEFDDLSDEELDDAVRRVLVFARAEPQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKA 696 (972)
T ss_pred HHHhCCCcCCcc-ccccccchhhhhcCCHHHHHHHhhcceEEEecCchhHHHHHHHHHhcCCEEEecCCCccchhhhhhc
Confidence 999999876554 4567999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcceeeCCCchHHHhhccCEEEccCChhHHHHHHHHhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHH
Q 001616 779 DVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLRWGRCVYTNIQKFIQFQLTVNVAALVINFIAAVSAGEVPLTAVQLL 858 (1044)
Q Consensus 779 dVGiamg~~gt~vAk~aaDivl~dd~f~~I~~~i~~GR~~~~ni~k~i~f~l~~nv~~~~~~~~~~~~~~~~pl~~~qlL 858 (1044)
|||||||++||++||+|||+||.||||++|+.++++||.+|+||++|+.|+++.|+.++++.|+++.+..+.||+|+|+|
T Consensus 697 dIGIAMG~~GTdVaKeAsDMVL~DDnFstIvaAVEEGr~IynNik~Fir~~lSsnVgev~~I~l~aa~~~p~pL~pvQiL 776 (972)
T KOG0202|consen 697 DIGIAMGISGTDVAKEASDMVLADDNFSTIVAAVEEGRAIYNNIKNFIRYLLSSNVGEVVLIFLTAAFGIPEPLIPVQIL 776 (972)
T ss_pred ccceeecCCccHhhHhhhhcEEecCcHHHHHHHHHHhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhCCCCcccchhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhhhHHHHHHhccCCCCcccccCCCCCCCCCcccHHHHHHHHHHHHHHHHHH---HHHHHhcc-cccCC--------
Q 001616 859 WVNLIMDTLGALALATDRPTDELMQRPPVGRTEPLITNIMWRNLLSQALYQITIL---LILQFKGE-SIFNV-------- 926 (1044)
Q Consensus 859 ~~nli~d~l~alala~e~p~~~lm~~~P~~~~~~li~~~~~~~i~~~~~~q~~v~---~~l~~~~~-~~~~~-------- 926 (1044)
|+|++||.+||.+|+.|||++++|+|||+++++++++...+..++..++|..+.. |..+|.+. .-...
T Consensus 777 WiNlvtDG~PA~aLG~ep~D~DiM~kpPR~~~~~iit~~l~~r~l~~g~~vg~~Tv~~f~~~~~~~~~~vt~~~~~~~~~ 856 (972)
T KOG0202|consen 777 WINLVTDGPPATALGFEPVDPDIMKKPPRDSKDGIITGWLIFRYLAIGIIVGVATVGVFVWWMYGADGKVTYRQLAHYNS 856 (972)
T ss_pred eeeeeccCCchhhcCCCCCChhHHhCCCCCCCCCeeeHHHHHHHHHhheeeeeeEhHhhhHHHhcCCCCcChhhhcchhh
Confidence 9999999999999999999999999999999999999988888888877764432 22222210 00000
Q ss_pred -------------CcccccchhhhHHHHHHHHHHhhhcccccccccccccccHHHHHHHHHHHHHHHHH--HHHhhHhhc
Q 001616 927 -------------SPEVNDTLIFNTFVFCQVFNEFNARKLEKRNVFKGIHKNKLFLGIIGITVVLQVVM--VEFLKKFAD 991 (1044)
Q Consensus 927 -------------~~~~~~t~~f~~~v~~q~fn~~n~r~~~~~~~f~~~~~n~~f~~~i~~~~~~qv~~--v~~~~~~f~ 991 (1044)
......||.|.+||+...||.+|||+-++.-+..++|.|+||++++++++++|+++ +++++..|+
T Consensus 857 c~~~~~~~~c~~F~~~~~~tMa~tv~V~~emfNaL~~~se~~slf~~~~~~N~~l~~ai~~S~~~~f~ilYvp~l~~iFq 936 (972)
T KOG0202|consen 857 CCRDFYGSRCAVFEDMCPLTMALTVLVFIEMFNALNCLSENKSLFTMPPWSNRWLLWAIALSFVLHFLVLYVPPLQRIFQ 936 (972)
T ss_pred hcccccccchhhhcccccceEEEeehhHHHHHHHhhcccCCcceEEecccccHHHHHHHHHHHHhhheEEEechhhhhhe
Confidence 01234599999999999999999999665544459999999999999999999875 578999999
Q ss_pred cCCCChHHHHHHHHHHHHHHHHHHHhhhccc
Q 001616 992 TERLNWQQWLACIAMAAFTWPIGWAVKFIPV 1022 (1044)
Q Consensus 992 ~~~l~~~~w~~~i~~~~~~~~~~~~~k~i~~ 1022 (1044)
++||++.+|++.+.+.+..++++++.|++..
T Consensus 937 ~~~l~~~ew~~vl~~s~~V~i~dEilK~~~R 967 (972)
T KOG0202|consen 937 TEPLSLAEWLLVLAISSPVIIVDEILKFIAR 967 (972)
T ss_pred ecCCcHHHHHHHHHHhhhhhhHHHHHHHHHH
Confidence 9999999999999999999999999999863
No 3
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=100.00 E-value=5.2e-156 Score=1477.92 Aligned_cols=912 Identities=45% Similarity=0.750 Sum_probs=812.3
Q ss_pred CCCCCCCCCHHHHHHHhcC-CChhHHHhhCCHHHHHHHhCCCcCCCCCcCHHHHHHHHhhcCCCcCCCCCCCcHHHHHHH
Q 001616 84 SNSIDPDMDGIRLAEMVKN-KDSHTLSLLGGVEGVANALGTNPEYGINGNDEDVSRRSQLFGANTYHKPPPKGLLHFVLE 162 (1044)
Q Consensus 84 ~~~~~~~~~~~~l~~~~~~-~~~~~l~~~ggv~~l~~~l~t~~~~GL~~~~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~ 162 (1044)
...++|++..+++.++.+. ++.+.|+++||++++++.|+|+.++||+.+++++++|+++||+|+++.++++++|+++++
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~t~~~~GLs~~~~ev~~r~~~yG~N~l~~~~~~s~~~~~~~ 92 (941)
T TIGR01517 13 NFTDGFDVGVSILTDLTDIFKRAPIYEKLGGAEGIATKLKTDLNEGVRLSSSTLERREKVYGKNELPEKPPKSFLQIVWA 92 (941)
T ss_pred ccCCCCCCCHHHHHHhcCchhhHHHHHHhCCHHHHHHHhCcCcccCCCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHH
Confidence 3456899999999999976 577889999999999999999999999954456999999999999999999999999999
Q ss_pred HhhhhHHHHHHHHHHHHHhhccc-----cCCCCccccchhHHHHHHHHHHHHhHHHHHHHHHHHHHhhcccCCceEEEEe
Q 001616 163 AFKDTTILILLVCAALSLGFGIK-----EHGAEEGWYEGGSIFVAVFLVIVVSAFSNFRQARQFDKLSKISNNIKVEVVR 237 (1044)
Q Consensus 163 ~~~~~~~~illv~a~lsl~~gi~-----~~g~~~~~~d~~~i~~~v~lv~~v~a~~~~~~~~~~~~l~~~~~~~~v~ViR 237 (1044)
+|+++++++|++++++|+++|+. +.++.++|+|++.|+++++++++++++++|++++++++|++..++.+++|+|
T Consensus 93 ~f~~~~~~~l~~~ails~~~~~~~~~~~~~~~~~~~~~~~~il~~v~~~~~i~~~~e~~~~~~~~~l~~~~~~~~~~ViR 172 (941)
T TIGR01517 93 ALSDQTLILLSVAAVVSLVLGLPEPGEGKADTETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIR 172 (941)
T ss_pred HHhCHHHHHHHHHHHHHHHHhhcccccccCccccchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccCCCceEEEE
Confidence 99999999999999999998843 3455568999999999999999999999999999999998766678999999
Q ss_pred CCeEEEEeecccccCcEEEeCCCCeeeccEEEEecCceeeecCCCCCCCCceeecCCCCceeeecceEeeCceEEEEEEe
Q 001616 238 EARRLQISIFDLVVGDIVFLKIGDQIPADGLFLDGHSLQVDESSMTGESDHVEVDSTNNPFLFSGSKVADGYAQMLVVSV 317 (1044)
Q Consensus 238 ~G~~~~I~~~dLvvGDIV~l~~Gd~VPADgill~g~~l~VDES~LTGEs~pv~k~~~~~~~l~sGt~v~~G~~~~~V~~v 317 (1044)
||++++|+++||||||+|.|++||+|||||++++|+.+.||||+|||||.|+.|.+.+.+++|+||.|.+|.++++|++|
T Consensus 173 dG~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~li~g~~l~VdES~LTGES~pv~K~~~~~n~v~~GT~v~~G~~~~iV~~t 252 (941)
T TIGR01517 173 GGQEQQISIHDIVVGDIVSLSTGDVVPADGVFISGLSLEIDESSITGESDPIKKGAPKDSFLLSGTVVNEGSGRMLVTAV 252 (941)
T ss_pred CCEEEEEeHHHCCCCCEEEECCCCEecccEEEEEcCcEEEEecccCCCCCcccccCCCCceEEeCCeEEeeEEEEEEEEe
Confidence 99999999999999999999999999999999999878999999999999999987777899999999999999999999
Q ss_pred cccchhHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccccCCCCCCcchhHHH
Q 001616 318 GMNTAWGEMMSSISSDSNERTPLQARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNA 397 (1044)
Q Consensus 318 G~~T~~gki~~~~~~~~~~~tplq~~l~~la~~i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (1044)
|.+|++||+++++.+.+ +++|+|++++++++++.++++++++++|+++++.++....... .. . . ......
T Consensus 253 G~~T~~gki~~~~~~~~-~~t~l~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~--~~-~----~--~~~~~~ 322 (941)
T TIGR01517 253 GVNSFGGKLMMELRAEG-EDTPLQEKLSELAGLIGKFGMGSAVLLFLVLSLRYVFRIIRGD--GR-D----T--EEDAQT 322 (941)
T ss_pred CCCcHHHHHHHhhccCC-CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccc--cc-c----c--chhhHH
Confidence 99999999999987654 6789999999999999999998888888877655443211100 00 0 0 001125
Q ss_pred HHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhhccccceeccchhhhcccCeeEEeeCcccccccCceEEEEEEeccc
Q 001616 398 VVSIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKFWLGQE 477 (1044)
Q Consensus 398 ~~~~~~~ai~ilvvavP~gLplavtl~la~~~~~m~k~~~lvr~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~ 477 (1044)
+...+..++++++++||||||+++|+++++++++|+++|++||+++++|+||++|+||||||||||+|+|+|++++..+.
T Consensus 323 ~~~~~~~al~llv~~iP~~Lp~~vti~l~~~~~~mak~~ilvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~ 402 (941)
T TIGR01517 323 FLDHFIIAVTIVVVAVPEGLPLAVTIALAYSMKKMMKDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQ 402 (941)
T ss_pred HHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHhCCCEEechHHhhhccCceEEEEcCcCceeeceEEEEEEEEecc
Confidence 67788999999999999999999999999999999999999999999999999999999999999999999999998654
Q ss_pred ccccccc-ccCChHHHHHHHHHHhhcCCccccccCCCCCcceecCChhHHHHHHHHHHHcCCChHHhhhcccEEEEecCC
Q 001616 478 SIVQETY-CKIASSIRDLFHQGVGLNTTGSVSKLKPGSSVAEFSGSPTEKAVLSWAVLEMGMEMDKVKQKYSILHVETFN 556 (1044)
Q Consensus 478 ~~~~~~~-~~~~~~~~~~l~~~i~~n~~~~~~~~~~~~~~~~~~gsp~e~All~~a~~~~g~~~~~~~~~~~il~~~pF~ 556 (1044)
.++.+.. ...++...+++..++++|+.+.... ++.+..+..|||+|.|+++++. +.|.+....+..+++++.+||+
T Consensus 403 ~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~~~--~~~~~~~~~g~p~e~All~~~~-~~~~~~~~~~~~~~~~~~~pF~ 479 (941)
T TIGR01517 403 RFNVRDVLRNVPKHVRNILVEGISLNSSSEEVV--DRGGKRAFIGSKTECALLGFLL-LLGRDYQEVRAEEKVVKIYPFN 479 (941)
T ss_pred eEecCcccccCCHHHHHHHHHHHHhCCCCcccc--CCCCccccCCCccHHHHHHHHH-HcCCCHHHHHhhchhccccccC
Confidence 4332211 1123345566777777777654322 1123346789999999999998 7888877777788899999999
Q ss_pred CCCceEEEEEEecCCCeEEEEecCcHHHHHHhcccccccCCeeecCChhhHHHHHHHHHHHHhcccceeeeeeeecCchh
Q 001616 557 SEKKRSGVLIRRKADNTTHIHWKGAAEIILAMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEE 636 (1044)
Q Consensus 557 s~rkrmsvvv~~~~~~~~~~~~KGA~e~Il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~~A~k~l~~~~ 636 (1044)
|++|||+++++.+++ ++++|+|||||.|+++|+++.+.+|...++++ .++++++.+++|+++|+||+++|||+++.++
T Consensus 480 s~~k~msvv~~~~~~-~~~~~~KGA~e~il~~c~~~~~~~g~~~~~~~-~~~~i~~~~~~~a~~G~Rvl~~A~~~~~~~~ 557 (941)
T TIGR01517 480 SERKFMSVVVKHSGG-KVREFRKGASEIVLKPCRKRLDSNGEATPISD-DKDRCADVIEPLASDALRTICLAYRDFAPEE 557 (941)
T ss_pred CCCCeEEEEEEeCCC-cEEEEEECChHHHHHhhhHHhhcCCCcccCcH-HHHHHHHHHHHHHhcCCEEEEEEEEecCccc
Confidence 999999999987554 48899999999999999988777888888887 7889999999999999999999999986422
Q ss_pred hcccchHHHhhhhcccCeEEEEEecccCCCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCccccccccccee
Q 001616 637 TAYNNDVKARQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEV 716 (1044)
Q Consensus 637 ~~~~~~~~~~~~~~e~~l~llG~vgi~D~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~~~~~~~~~~v 716 (1044)
.. ..+..|+||+|+|+++++||+||+++++|+.||++||+|+|+||||..||.+||++|||.++ ...+
T Consensus 558 ~~-------~~~~~e~~l~~lGli~~~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~-----~~~v 625 (941)
T TIGR01517 558 FP-------RKDYPNGGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTF-----GGLA 625 (941)
T ss_pred cc-------cccccccCcEEEEEeeccCCCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCC-----CceE
Confidence 11 12234789999999999999999999999999999999999999999999999999999875 3469
Q ss_pred ecchhhhcCCHHHHHHHhccccEEeecChhhHHHHHHHHHhcCCEEEEEcCCcCCHHHHhhCCcceeeCCCchHHHhhcc
Q 001616 717 VEGVEFRNYTDEERIQKVDKIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESS 796 (1044)
Q Consensus 717 i~g~~~~~~~~~~~~~~~~~~~V~ar~sP~~K~~lV~~lq~~g~vVa~~GDG~NDapaLk~AdVGiamg~~gt~vAk~aa 796 (1044)
++|++++.++++++.+.++++.||||++|+||.++|+.||++|++|||||||+||+||||+||||||||++|+|+||++|
T Consensus 626 i~G~~~~~l~~~el~~~i~~~~Vfar~sPe~K~~iV~~lq~~g~vVam~GDGvNDapALk~AdVGIAmg~~gtdvAk~aA 705 (941)
T TIGR01517 626 MEGKEFRRLVYEEMDPILPKLRVLARSSPLDKQLLVLMLKDMGEVVAVTGDGTNDAPALKLADVGFSMGISGTEVAKEAS 705 (941)
T ss_pred eeHHHhhhCCHHHHHHHhccCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCCchHHHHHhCCcceecCCCccHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CEEEccCChhHHHHHHHHhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHhhhhhHHHHHHhccCC
Q 001616 797 DIVILDDDFTSVATVLRWGRCVYTNIQKFIQFQLTVNVAALVINFIAAVSAGEVPLTAVQLLWVNLIMDTLGALALATDR 876 (1044)
Q Consensus 797 Divl~dd~f~~I~~~i~~GR~~~~ni~k~i~f~l~~nv~~~~~~~~~~~~~~~~pl~~~qlL~~nli~d~l~alala~e~ 876 (1044)
|++++||||++|+++++|||++|+||+|+++|++++|+..+++.+++.++.+++|++++|+||+|+++|.+|+++|++|+
T Consensus 706 DivL~dd~f~~I~~~i~~gR~~~~ni~k~i~~~l~~n~~~i~~~~~~~~~~~~~pl~~~qil~inl~~d~~~al~l~~e~ 785 (941)
T TIGR01517 706 DIILLDDNFASIVRAVKWGRNVYDNIRKFLQFQLTVNVVAVILTFVGSCISSTSPLTAVQLLWVNLIMDTLAALALATEP 785 (941)
T ss_pred CEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHhhHHHHccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccccCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHhcccccCCC---------cccccchhhhHHHHHHHHHH
Q 001616 877 PTDELMQRPPVGRTEPLITNIMWRNLLSQALYQITILLILQFKGESIFNVS---------PEVNDTLIFNTFVFCQVFNE 947 (1044)
Q Consensus 877 p~~~lm~~~P~~~~~~li~~~~~~~i~~~~~~q~~v~~~l~~~~~~~~~~~---------~~~~~t~~f~~~v~~q~fn~ 947 (1044)
|++++|++||++++++++++.||++++++++|+.++.+++++.+..+++.. ....+|++|++|+++|+||.
T Consensus 786 ~~~~lm~~~P~~~~~~li~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~~~~~~ 865 (941)
T TIGR01517 786 PTEALLDRKPIGRNAPLISRSMWKNILGQAGYQLVVTFILLFAGGSIFDVSGPDEITSHQQGELNTIVFNTFVLLQLFNE 865 (941)
T ss_pred ccHHHHhCCCCCCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCcccccccccchhhHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999988877776655444321 24578999999999999999
Q ss_pred hhhcccccccccccccccHHHHHHHHHHHHHHHHHHHHhhHhhccCCCChHHHHHHHHHHHHHHHHHHHhhhccc
Q 001616 948 FNARKLEKRNVFKGIHKNKLFLGIIGITVVLQVVMVEFLKKFADTERLNWQQWLACIAMAAFTWPIGWAVKFIPV 1022 (1044)
Q Consensus 948 ~n~r~~~~~~~f~~~~~n~~f~~~i~~~~~~qv~~v~~~~~~f~~~~l~~~~w~~~i~~~~~~~~~~~~~k~i~~ 1022 (1044)
+|+|.....++|+++++|++|+.++++++++|++++++++.+|++.||++.+|++|++++++.+++.++.|++|+
T Consensus 866 ~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~l~~~~~~~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~~~~~~~~~ 940 (941)
T TIGR01517 866 INARKLYERNVFEGLFKNRIFVTIMGFTFGFQVIIVEFGGSFFSTVSLSIEQWIGCVLLGMLSLIFGVLLRLIPV 940 (941)
T ss_pred HHHccCCcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 999997656889999999999999999999999999999999999999999999999999999999999999985
No 4
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=100.00 E-value=7.5e-147 Score=1392.52 Aligned_cols=866 Identities=27% Similarity=0.411 Sum_probs=738.4
Q ss_pred CHHHHHHHhCCCcCCCCCcCHHHHHHHHhhcCCCcCCCCCCCcHHHHHHHHhhhhHHHHHHHHHHHHHhhccccCCCCcc
Q 001616 113 GVEGVANALGTNPEYGINGNDEDVSRRSQLFGANTYHKPPPKGLLHFVLEAFKDTTILILLVCAALSLGFGIKEHGAEEG 192 (1044)
Q Consensus 113 gv~~l~~~l~t~~~~GL~~~~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~illv~a~lsl~~gi~~~g~~~~ 192 (1044)
.++++.+.|+|+..+||+++| +++|+++||+|++++++++++|+.++++|.++++++|++++++|++++ .
T Consensus 11 ~~~~v~~~l~t~~~~GLs~~e--a~~rl~~~G~N~l~~~~~~s~~~~~l~q~~~~~~~iL~~aails~~~~--------~ 80 (1053)
T TIGR01523 11 IADEAAEFIGTSIPEGLTHDE--AQHRLKEVGENRLEADSGIDAKAMLLHQVCNAMCMVLIIAAAISFAMH--------D 80 (1053)
T ss_pred CHHHHHHHhCcCcccCCCHHH--HHHHHHHcCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHh--------h
Confidence 578899999999989999876 999999999999999999999999999999999999999999999886 6
Q ss_pred ccchhHHHHHHHHHHHHhHHHHHHHHHHHHHhhcccCCceEEEEeCCeEEEEeecccccCcEEEeCCCCeeeccEEEEec
Q 001616 193 WYEGGSIFVAVFLVIVVSAFSNFRQARQFDKLSKISNNIKVEVVREARRLQISIFDLVVGDIVFLKIGDQIPADGLFLDG 272 (1044)
Q Consensus 193 ~~d~~~i~~~v~lv~~v~a~~~~~~~~~~~~l~~~~~~~~v~ViR~G~~~~I~~~dLvvGDIV~l~~Gd~VPADgill~g 272 (1044)
|+|++.|++.++++++++.+++|+.++..++|.+. ...+++|+|||++++|+++||||||||.|++||+|||||+|+++
T Consensus 81 ~~~~~iIl~vv~in~~i~~~QE~~aekal~aL~~l-~~~~~~ViRdg~~~~I~a~eLVpGDIv~L~~Gd~VPAD~rLi~~ 159 (1053)
T TIGR01523 81 WIEGGVISAIIALNILIGFIQEYKAEKTMDSLKNL-ASPMAHVIRNGKSDAIDSHDLVPGDICLLKTGDTIPADLRLIET 159 (1053)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcc-CCCceEEEeCCeeeecCHhhCCCCCEEEECCCCEeeccEEEEEe
Confidence 99999999999999999999999999999999876 45689999999999999999999999999999999999999999
Q ss_pred CceeeecCCCCCCCCceeecCC-------------CCceeeecceEeeCceEEEEEEecccchhHHHHhhcCCCCC----
Q 001616 273 HSLQVDESSMTGESDHVEVDST-------------NNPFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSSISSDSN---- 335 (1044)
Q Consensus 273 ~~l~VDES~LTGEs~pv~k~~~-------------~~~~l~sGt~v~~G~~~~~V~~vG~~T~~gki~~~~~~~~~---- 335 (1044)
++|.||||+|||||.|+.|.+. +.|++|+||.|.+|.|+++|++||++|+.|||.+++.+.+.
T Consensus 160 ~~L~VDES~LTGES~pV~K~~~~~~~~~~~~~~~d~~n~lf~GT~V~~G~g~~vVvatG~~T~~GkIa~~~~~~~~~~~~ 239 (1053)
T TIGR01523 160 KNFDTDEALLTGESLPVIKDAHATFGKEEDTPIGDRINLAFSSSAVTKGRAKGICIATALNSEIGAIAAGLQGDGGLFQR 239 (1053)
T ss_pred CceEEEchhhcCCCCceeccccccccccccCCcccCCCccccCceEEeeeEEEEEEEecCccHHHHHHHHHhhhhhcccc
Confidence 9999999999999999999642 24689999999999999999999999999999998754321
Q ss_pred -------------------------------CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccc
Q 001616 336 -------------------------------ERTPLQARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEY 384 (1044)
Q Consensus 336 -------------------------------~~tplq~~l~~la~~i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~ 384 (1044)
.+||||+++++++.+++.+++++++++|++... .
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~~~~~~~~~~----~----------- 304 (1053)
T TIGR01523 240 PEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHKF----D----------- 304 (1053)
T ss_pred ccccccccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhh----h-----------
Confidence 249999999999999988888777766653211 0
Q ss_pred CCCCCCcchhHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhhccccceeccchhhhcccCeeEEeeCccccccc
Q 001616 385 NGSNTDIDDVFNAVVSIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTL 464 (1044)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~ai~ilvvavP~gLplavtl~la~~~~~m~k~~~lvr~~~a~E~Lg~v~~Ic~DKTGTLT~ 464 (1044)
.+...+..+++++++++|||||+.+|++++++++||+++|++||+++++|+||++|+||+|||||||+
T Consensus 305 ------------~~~~~~~~av~l~Va~VPegLp~~vti~La~g~~rMak~~~lVr~L~avEtLG~vtvICsDKTGTLT~ 372 (1053)
T TIGR01523 305 ------------VDKEVAIYAICLAISIIPESLIAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGTITQ 372 (1053)
T ss_pred ------------hhHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHhcCCEeccchhhhhccCccEEEecCcCcccc
Confidence 11245667899999999999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEEEEeccc-c---------cccc--c---------------------c--------c--c-----CChHHHHHHH
Q 001616 465 NQMKVTKFWLGQE-S---------IVQE--T---------------------Y--------C--K-----IASSIRDLFH 496 (1044)
Q Consensus 465 n~m~v~~~~~~~~-~---------~~~~--~---------------------~--------~--~-----~~~~~~~~l~ 496 (1044)
|+|+|+++|..+. . |.++ . . . . .++...+ +.
T Consensus 373 N~M~V~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-ll 451 (1053)
T TIGR01523 373 GKMIARQIWIPRFGTISIDNSDDAFNPNEGNVSGIPRFSPYEYSHNEAADQDILKEFKDELKEIDLPEDIDMDLFIK-LL 451 (1053)
T ss_pred ceEEEEEEEEcCCceEEecCCCCCCCCcccccccccccccccccccccccccccccccccccccccccccccHHHHH-HH
Confidence 9999999997541 1 1100 0 0 0 0 0011223 34
Q ss_pred HHHhhcCCccccccCCCCCcceecCChhHHHHHHHHHHHcCCChH------Hh-------------------hhcccEEE
Q 001616 497 QGVGLNTTGSVSKLKPGSSVAEFSGSPTEKAVLSWAVLEMGMEMD------KV-------------------KQKYSILH 551 (1044)
Q Consensus 497 ~~i~~n~~~~~~~~~~~~~~~~~~gsp~e~All~~a~~~~g~~~~------~~-------------------~~~~~il~ 551 (1044)
...++|+.+..... +.++.+...|||+|.||+.++. +.|.+.. .. +.+|++++
T Consensus 452 ~~~~lcn~a~~~~~-~~~~~~~~~GdptE~ALl~~a~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (1053)
T TIGR01523 452 ETAALANIATVFKD-DATDCWKAHGDPTEIAIHVFAK-KFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQFEFIA 529 (1053)
T ss_pred HHHHhccCCeeecc-CCCCceeeCcCccHHHHHHHHH-HcCCCcccccchhhhhhhccccccccccccccccccccceEE
Confidence 44555665554321 1223345679999999999998 7777421 11 23578999
Q ss_pred EecCCCCCceEEEEEEecCCCeEEEEecCcHHHHHHhcccccccCC-eeecCChhhHHHHHHHHHHHHhcccceeeeeee
Q 001616 552 VETFNSEKKRSGVLIRRKADNTTHIHWKGAAEIILAMCSHYYESNG-VIKSMDGNGRSQMENIIHGMAASSLRCIAFAYK 630 (1044)
Q Consensus 552 ~~pF~s~rkrmsvvv~~~~~~~~~~~~KGA~e~Il~~c~~~~~~~g-~~~~l~~~~~~~~~~~i~~~a~~glR~l~~A~k 630 (1044)
.+||+|+||||+++++.++++.+++|+|||||.|+++|+++...+| +..+++++.++++++.+++|+++|+||||+|||
T Consensus 530 ~~pFds~rK~msvv~~~~~~~~~~~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~r 609 (1053)
T TIGR01523 530 EFPFDSEIKRMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAFASK 609 (1053)
T ss_pred EeccCCCCCeEEEEEEeCCCCEEEEEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCCeEEEEEEE
Confidence 9999999999999998765555889999999999999998766555 567999999999999999999999999999999
Q ss_pred ecCchhhcccchH--HHhhhhcccCeEEEEEecccCCCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCcccc
Q 001616 631 QVSEEETAYNNDV--KARQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLD 708 (1044)
Q Consensus 631 ~l~~~~~~~~~~~--~~~~~~~e~~l~llG~vgi~D~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~~~ 708 (1044)
.++.++....... ...++..|+||+|+|+++++||+||+++++|+.|++|||+|+|+||||..||.+||++|||.+++
T Consensus 610 ~l~~~~~~~~~~~~~~~~~~~~e~~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~ 689 (1053)
T TIGR01523 610 SFDKADNNDDQLKNETLNRATAESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPN 689 (1053)
T ss_pred ECCchhccchhhhccccchhhhccCCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcc
Confidence 9874321100000 01123468999999999999999999999999999999999999999999999999999998642
Q ss_pred cc-----cccceeecchhhhcCCHHHHHHHhccccEEeecChhhHHHHHHHHHhcCCEEEEEcCCcCCHHHHhhCCccee
Q 001616 709 QQ-----VEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLS 783 (1044)
Q Consensus 709 ~~-----~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~ar~sP~~K~~lV~~lq~~g~vVa~~GDG~NDapaLk~AdVGia 783 (1044)
.. .....+++|++++.++++++.+.++++.||||++|+||.++|+.||++|++|+|||||+||+||||+||||||
T Consensus 690 ~~~~~~~~~~~~vitG~~l~~l~~~~l~~~~~~~~V~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdVGIA 769 (1053)
T TIGR01523 690 FIHDRDEIMDSMVMTGSQFDALSDEEVDDLKALCLVIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIA 769 (1053)
T ss_pred ccccccccccceeeehHHhhhcCHHHHHHHhhcCeEEEecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHhCCccEe
Confidence 11 1134799999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCchHHHhhccCEEEccCChhHHHHHHHHhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhc---C--CCchhHHHHH
Q 001616 784 MGIQGTEVAKESSDIVILDDDFTSVATVLRWGRCVYTNIQKFIQFQLTVNVAALVINFIAAVSA---G--EVPLTAVQLL 858 (1044)
Q Consensus 784 mg~~gt~vAk~aaDivl~dd~f~~I~~~i~~GR~~~~ni~k~i~f~l~~nv~~~~~~~~~~~~~---~--~~pl~~~qlL 858 (1044)
||++|+++||++||++++||||++|+.+++|||++|+||+|+++|++++|+..+++.+++.++. | +.||+++|+|
T Consensus 770 mg~~gt~vak~aADivl~dd~f~~I~~~i~~gR~~~~ni~k~i~y~l~~ni~~i~~~~~~~~~~~~~g~~~~Pl~~~qiL 849 (1053)
T TIGR01523 770 MGINGSDVAKDASDIVLSDDNFASILNAIEEGRRMFDNIMKFVLHLLAENVAEAILLIIGLAFRDENGKSVFPLSPVEIL 849 (1053)
T ss_pred cCCCccHHHHHhcCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccCCCcCchHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999888874 2 4799999999
Q ss_pred HHhhhhhHHHHHHhccCCCCcccccCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHH---hcc--cc-c-------C
Q 001616 859 WVNLIMDTLGALALATDRPTDELMQRPPVGRTEPLITNIMWRNLLSQALYQITILLILQF---KGE--SI-F-------N 925 (1044)
Q Consensus 859 ~~nli~d~l~alala~e~p~~~lm~~~P~~~~~~li~~~~~~~i~~~~~~q~~v~~~l~~---~~~--~~-~-------~ 925 (1044)
|+|+++|.+|+++|++|||++++|+|||+.++++++++.+++.++.+++++.+..+..++ ++. .. . +
T Consensus 850 ~inli~d~~palaL~~e~~~~~~m~~~Pr~~~~~l~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 929 (1053)
T TIGR01523 850 WCIMITSCFPAMGLGLEKAAPDLMDRLPHDNEVGIFQKELIIDMFAYGFFLGGSCLASFTGILYGFGSGNLGHDCDAHYH 929 (1053)
T ss_pred HHHHHHHHHHHHhhccCCCChhHHhcCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccccccc
Confidence 999999999999999999999999999999999999999999999999887765544332 211 00 0 0
Q ss_pred C---CcccccchhhhHHHHHHHHHHhhhcccccccccc----------------cccccHHHHHHHHHHHHHHHHH--HH
Q 001616 926 V---SPEVNDTLIFNTFVFCQVFNEFNARKLEKRNVFK----------------GIHKNKLFLGIIGITVVLQVVM--VE 984 (1044)
Q Consensus 926 ~---~~~~~~t~~f~~~v~~q~fn~~n~r~~~~~~~f~----------------~~~~n~~f~~~i~~~~~~qv~~--v~ 984 (1044)
. +....+|+.|.+++++|++|.+|+|+.+ .++|+ +.++|+++++++++++++|+++ ++
T Consensus 930 ~~~~~~~~a~t~~f~~l~~~~~~~~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~~N~~l~~~~~~~~~l~~~~~~~p 1008 (1053)
T TIGR01523 930 AGCNDVFKARSAAFATMTFCALILAVEVKDFD-NSFFNLHGIPDGDSNFKEFFHSIVENKFLAWAIAFAAVSAFPTIYIP 1008 (1053)
T ss_pred ccccchhhhHHHHHHHHHHHHHHHHHHHhcCc-hhhhhcCccccccccccccccCCccCHHHHHHHHHHHHHHHHHHhhh
Confidence 0 1235689999999999999999999864 33343 4689999999999999988765 56
Q ss_pred HhhH-hhccCCCChHHHHHHHHHHHHHHHHHHHhhhcc
Q 001616 985 FLKK-FADTERLNWQQWLACIAMAAFTWPIGWAVKFIP 1021 (1044)
Q Consensus 985 ~~~~-~f~~~~l~~~~w~~~i~~~~~~~~~~~~~k~i~ 1021 (1044)
+++. +|++.||++ +|+++++++++.+++.++.|++.
T Consensus 1009 ~~~~~~f~~~~l~~-~w~~~~~~~~~~~~~~e~~K~~~ 1045 (1053)
T TIGR01523 1009 VINDDVFKHKPIGA-EWGLAAAATIAFFFGAEIWKCGK 1045 (1053)
T ss_pred hhhhhhhccCCcch-HHHHHHHHHHHHHHHHHHHHHHH
Confidence 7875 999999997 89999999999999999999764
No 5
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=100.00 E-value=2.2e-143 Score=1354.74 Aligned_cols=840 Identities=32% Similarity=0.526 Sum_probs=744.5
Q ss_pred CHHHHHHHhCCCcCCCCCcCHHHHHHHHhhcCCCcCCCCCCCcHHHHHHHHh-hhhHHHHHHHHHHHHHhhccccCCCCc
Q 001616 113 GVEGVANALGTNPEYGINGNDEDVSRRSQLFGANTYHKPPPKGLLHFVLEAF-KDTTILILLVCAALSLGFGIKEHGAEE 191 (1044)
Q Consensus 113 gv~~l~~~l~t~~~~GL~~~~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~-~~~~~~illv~a~lsl~~gi~~~g~~~ 191 (1044)
.++++++.|+|+..+||+++ +++++|+++||+|+++.++++++|+.++++| +++++++|++++++|+++|
T Consensus 8 ~~~~v~~~l~t~~~~GLs~~-~ev~~r~~~~G~N~i~~~~~~s~~~~~l~~~~~~~~~~~L~~aa~ls~~~g-------- 78 (884)
T TIGR01522 8 SVEETCSKLQTDLQNGLNSS-QEASHRRAFHGWNEFDVEEDESLWKKFLSQFVKNPLILLLIASAVISVFMG-------- 78 (884)
T ss_pred CHHHHHHHhCcCcccCCCcH-HHHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhChHHHHHHHHHHHHHHHc--------
Confidence 68899999999999999933 3499999999999999998999999999999 9999999999999999987
Q ss_pred cccchhHHHHHHHHHHHHhHHHHHHHHHHHHHhhcccCCceEEEEeCCeEEEEeecccccCcEEEeCCCCeeeccEEEEe
Q 001616 192 GWYEGGSIFVAVFLVIVVSAFSNFRQARQFDKLSKISNNIKVEVVREARRLQISIFDLVVGDIVFLKIGDQIPADGLFLD 271 (1044)
Q Consensus 192 ~~~d~~~i~~~v~lv~~v~a~~~~~~~~~~~~l~~~~~~~~v~ViR~G~~~~I~~~dLvvGDIV~l~~Gd~VPADgill~ 271 (1044)
.|.|+++|+++++++++++.+++|+.++..++|.+. .+.+++|+|||++++|+++||||||||.|++||+|||||++++
T Consensus 79 ~~~~~~~i~~~i~~~~~i~~~qe~~a~~~l~~L~~l-~~~~~~ViRdg~~~~I~~~eLv~GDiv~l~~Gd~IPaDg~ii~ 157 (884)
T TIGR01522 79 NIDDAVSITLAILIVVTVGFVQEYRSEKSLEALNKL-VPPECHLIREGKLEHVLASTLVPGDLVCLSVGDRVPADLRIVE 157 (884)
T ss_pred chhhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcc-CCCeeEEEECCEEEEEEHHHCccCCEEEecCCCEEeeeEEEEE
Confidence 689999999999999999999999999999999865 4568999999999999999999999999999999999999999
Q ss_pred cCceeeecCCCCCCCCceeecCC------------CCceeeecceEeeCceEEEEEEecccchhHHHHhhcCCCCCCCCh
Q 001616 272 GHSLQVDESSMTGESDHVEVDST------------NNPFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSSISSDSNERTP 339 (1044)
Q Consensus 272 g~~l~VDES~LTGEs~pv~k~~~------------~~~~l~sGt~v~~G~~~~~V~~vG~~T~~gki~~~~~~~~~~~tp 339 (1044)
|+++.||||+|||||.|+.|.+. .++++|+||.|.+|.++++|++||.+|++|++.+.+.+....+||
T Consensus 158 g~~l~VDES~LTGES~pv~K~~~~~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~gki~~~v~~~~~~kt~ 237 (884)
T TIGR01522 158 AVDLSIDESNLTGETTPVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKMMQAIEKPKTP 237 (884)
T ss_pred cCceEEEcccccCCCcceecccccccccccccccccCceEEeCCEEEeeeEEEEEEEecCccHHHHHHHHhccCCCCCCc
Confidence 98889999999999999999753 236899999999999999999999999999999999888888999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccccCCCCCCcchhHHHHHHHHHHHHHHHHHHhcchhHH
Q 001616 340 LQARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAAAVTIVVVAIPEGLPL 419 (1044)
Q Consensus 340 lq~~l~~la~~i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~ilvvavP~gLpl 419 (1044)
+|+.+++++.++..++++++++++++ .|+.+. .+...+..++++++++||||||+
T Consensus 238 lq~~l~~l~~~~~~~~~~~~~~~~~~---~~~~~~----------------------~~~~~~~~~v~llv~aiP~~Lp~ 292 (884)
T TIGR01522 238 LQKSMDLLGKQLSLVSFGVIGVICLV---GWFQGK----------------------DWLEMFTISVSLAVAAIPEGLPI 292 (884)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH---HHHhcC----------------------CHHHHHHHHHHHHHHHccchHHH
Confidence 99999999999888776555444433 222221 35567888999999999999999
Q ss_pred HHHHHHHHHHHhhccccceeccchhhhcccCeeEEeeCcccccccCceEEEEEEeccccccc--------cc--------
Q 001616 420 AVTLTLAYSMKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKFWLGQESIVQ--------ET-------- 483 (1044)
Q Consensus 420 avtl~la~~~~~m~k~~~lvr~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~--------~~-------- 483 (1044)
++|++++++++||+++|++||+++++|+||++|+||||||||||+|+|+|.+++..+..... ..
T Consensus 293 ~vt~~l~~~~~r~ak~~ilvk~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (884)
T TIGR01522 293 IVTVTLALGVLRMSKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVDGDV 372 (884)
T ss_pred HHHHHHHHHHHHHhhcCCcccchHHHHhccCccEEEecCccccccCeEEEEEEEecCceEeeccCCccCCCCcccccccc
Confidence 99999999999999999999999999999999999999999999999999999875532210 00
Q ss_pred -cccCChHHHHHHHHHHhhcCCccccccCCCCCcceecCChhHHHHHHHHHHHcCCChHHhhhcccEEEEecCCCCCceE
Q 001616 484 -YCKIASSIRDLFHQGVGLNTTGSVSKLKPGSSVAEFSGSPTEKAVLSWAVLEMGMEMDKVKQKYSILHVETFNSEKKRS 562 (1044)
Q Consensus 484 -~~~~~~~~~~~l~~~i~~n~~~~~~~~~~~~~~~~~~gsp~e~All~~a~~~~g~~~~~~~~~~~il~~~pF~s~rkrm 562 (1044)
....++...+++..+ ++|+++.... .+ ....|||+|+|+++++. +.|.+ ..+..++.++.+||+|+||||
T Consensus 373 ~~~~~~~~~~~~l~~~-~l~~~~~~~~---~~--~~~~g~p~e~All~~~~-~~~~~--~~~~~~~~~~~~pF~s~~k~m 443 (884)
T TIGR01522 373 LHGFYTVAVSRILEAG-NLCNNAKFRN---EA--DTLLGNPTDVALIELLM-KFGLD--DLRETYIRVAEVPFSSERKWM 443 (884)
T ss_pred cccccCHHHHHHHHHH-hhhCCCeecC---CC--CCcCCChHHHHHHHHHH-HcCcH--hHHhhCcEEeEeCCCCCCCeE
Confidence 000112334444444 3444443321 11 13468999999999997 66653 345568899999999999999
Q ss_pred EEEEEecCCCeEEEEecCcHHHHHHhcccccccCCeeecCChhhHHHHHHHHHHHHhcccceeeeeeeecCchhhcccch
Q 001616 563 GVLIRRKADNTTHIHWKGAAEIILAMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAYNND 642 (1044)
Q Consensus 563 svvv~~~~~~~~~~~~KGA~e~Il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~~A~k~l~~~~~~~~~~ 642 (1044)
+++++...++++++|+|||||.|+++|+++...+|...+++++.++++++.+++|+++|+|++++|||+++
T Consensus 444 ~v~~~~~~~~~~~~~~KGape~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~G~rvl~~A~~~~~--------- 514 (884)
T TIGR01522 444 AVKCVHRQDRSEMCFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASGPEK--------- 514 (884)
T ss_pred EEEEEEcCCCeEEEEEeCChHHHHHhhhhhhhcCCCeeeCCHHHHHHHHHHHHHHHhcCCEEEEEEEEcCC---------
Confidence 99998754456889999999999999999988788888999999999999999999999999999998753
Q ss_pred HHHhhhhcccCeEEEEEecccCCCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCcccccccccceeecchhh
Q 001616 643 VKARQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEF 722 (1044)
Q Consensus 643 ~~~~~~~~e~~l~llG~vgi~D~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~g~~~ 722 (1044)
++|+|+|+++++||+|||++++|+.|+++||+++|+|||+..||.++|++|||... ...+++|+++
T Consensus 515 ---------~~l~~lGli~l~Dp~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~-----~~~~v~g~~l 580 (884)
T TIGR01522 515 ---------GQLTFLGLVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPSK-----TSQSVSGEKL 580 (884)
T ss_pred ---------CCeEEEEEEeccCcchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCC-----CCceeEhHHh
Confidence 47999999999999999999999999999999999999999999999999999864 3457899999
Q ss_pred hcCCHHHHHHHhccccEEeecChhhHHHHHHHHHhcCCEEEEEcCCcCCHHHHhhCCcceeeCCCchHHHhhccCEEEcc
Q 001616 723 RNYTDEERIQKVDKIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILD 802 (1044)
Q Consensus 723 ~~~~~~~~~~~~~~~~V~ar~sP~~K~~lV~~lq~~g~vVa~~GDG~NDapaLk~AdVGiamg~~gt~vAk~aaDivl~d 802 (1044)
+.++++++.+.+++..||||++|+||..+|+.||+.|++|+|+|||+||+|||++||||||||.+|+++|+++||++++|
T Consensus 581 ~~~~~~~l~~~~~~~~Vfar~~P~~K~~iv~~lq~~g~~v~mvGDGvND~pAl~~AdVGia~g~~g~~va~~aaDivl~d 660 (884)
T TIGR01522 581 DAMDDQQLSQIVPKVAVFARASPEHKMKIVKALQKRGDVVAMTGDGVNDAPALKLADIGVAMGQTGTDVAKEAADMILTD 660 (884)
T ss_pred HhCCHHHHHHHhhcCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHHhCCeeEecCCCcCHHHHHhcCEEEcC
Confidence 99999999999999999999999999999999999999999999999999999999999999978999999999999999
Q ss_pred CChhHHHHHHHHhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHhhhhhHHHHHHhccCCCCcccc
Q 001616 803 DDFTSVATVLRWGRCVYTNIQKFIQFQLTVNVAALVINFIAAVSAGEVPLTAVQLLWVNLIMDTLGALALATDRPTDELM 882 (1044)
Q Consensus 803 d~f~~I~~~i~~GR~~~~ni~k~i~f~l~~nv~~~~~~~~~~~~~~~~pl~~~qlL~~nli~d~l~alala~e~p~~~lm 882 (1044)
|||++|+.+++|||++|+||+|+++|+++.|+..+++.+++.++..+.||+++|+||+|+++|.+|+++|++|||++++|
T Consensus 661 d~~~~i~~~i~~gR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qiL~inl~~d~~~a~~l~~e~~~~~~m 740 (884)
T TIGR01522 661 DDFATILSAIEEGKGIFNNIKNFITFQLSTSVAALSLIALATLMGFPNPLNAMQILWINILMDGPPAQSLGVEPVDKDVM 740 (884)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhhHHHHhccCCCChhHh
Confidence 99999999999999999999999999999999999999888999899999999999999999999999999999999999
Q ss_pred cCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCcccccchhhhHHHHHHHHHHhhhcccccccccc-c
Q 001616 883 QRPPVGRTEPLITNIMWRNLLSQALYQITILLILQFKGESIFNVSPEVNDTLIFNTFVFCQVFNEFNARKLEKRNVFK-G 961 (1044)
Q Consensus 883 ~~~P~~~~~~li~~~~~~~i~~~~~~q~~v~~~l~~~~~~~~~~~~~~~~t~~f~~~v~~q~fn~~n~r~~~~~~~f~-~ 961 (1044)
+|||+.++++++++.||++++++++++.++.+++++.... .+.....++|++|++|++||+||.+|+|+. +.++|+ +
T Consensus 741 ~~~P~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~t~~f~~~v~~q~~~~~~~r~~-~~~~~~~~ 818 (884)
T TIGR01522 741 RKPPRPRNDKILTKDLIKKILVSAIIIVVGTLFVFVREMQ-DGVITARDTTMTFTCFVFFDMFNALACRSQ-TKSVFEIG 818 (884)
T ss_pred hCCCCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCcchhhHHHHHHHHHHHHHHHHHHHHccC-CccccccC
Confidence 9999999999999999999999999988776655443211 121234568999999999999999999994 678887 8
Q ss_pred ccccHHHHHHHHHHHHHHHHHH--HHhhHhhccCCCChHHHHHHHHHHHHHHHHHHHhhhcc
Q 001616 962 IHKNKLFLGIIGITVVLQVVMV--EFLKKFADTERLNWQQWLACIAMAAFTWPIGWAVKFIP 1021 (1044)
Q Consensus 962 ~~~n~~f~~~i~~~~~~qv~~v--~~~~~~f~~~~l~~~~w~~~i~~~~~~~~~~~~~k~i~ 1021 (1044)
+++|++|++++++++++|++++ ++++.+|++.||++.+|++|++++++.+++.++.|++.
T Consensus 819 ~~~n~~~~~~~~~~~~~~~~~~~~p~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~ 880 (884)
T TIGR01522 819 FFSNRMFNYAVGGSIIGQLLVIYFPPLQSVFQTEALSIKDLLFLLLITSSVCIVDEIRKKVE 880 (884)
T ss_pred cccCHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999998876 47899999999999999999999999999999999764
No 6
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=100.00 E-value=2.1e-142 Score=1356.66 Aligned_cols=876 Identities=25% Similarity=0.383 Sum_probs=745.3
Q ss_pred CHHHHHHHhCCCcCCCCCcCHHHHHHHHhhcCCCcCCCCCCCcHHHHHHHHhhhhHHHHHHHHHHHHHhh-cccc----C
Q 001616 113 GVEGVANALGTNPEYGINGNDEDVSRRSQLFGANTYHKPPPKGLLHFVLEAFKDTTILILLVCAALSLGF-GIKE----H 187 (1044)
Q Consensus 113 gv~~l~~~l~t~~~~GL~~~~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~illv~a~lsl~~-gi~~----~ 187 (1044)
.++++++.|+|+..+||+++| +++|+++||+|++++++++++|+.++++|.++++++|+++++++++. ++.. +
T Consensus 21 ~~~~~~~~l~t~~~~GLs~~e--~~~rl~~~G~N~l~~~~~~~~~~~~l~~~~~~~~~iL~~aa~l~~~~~~~~~~~~~~ 98 (997)
T TIGR01106 21 SLDELERKYGTDLSKGLSAAR--AAEILARDGPNALTPPPTTPEWVKFCRQLFGGFSMLLWIGAILCFLAYGIQASTEEE 98 (997)
T ss_pred CHHHHHHHhCcCcccCCCHHH--HHHHHHHhCCCCCCCCCCCCHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccCCC
Confidence 688899999999999999876 99999999999999988999999999999999999999999998765 3321 1
Q ss_pred CCCccccchhHHHHHHHHHHHHhHHHHHHHHHHHHHhhcccCCceEEEEeCCeEEEEeecccccCcEEEeCCCCeeeccE
Q 001616 188 GAEEGWYEGGSIFVAVFLVIVVSAFSNFRQARQFDKLSKISNNIKVEVVREARRLQISIFDLVVGDIVFLKIGDQIPADG 267 (1044)
Q Consensus 188 g~~~~~~d~~~i~~~v~lv~~v~a~~~~~~~~~~~~l~~~~~~~~v~ViR~G~~~~I~~~dLvvGDIV~l~~Gd~VPADg 267 (1044)
.....|++++.+++.+++..+++.+++++.++..+++.+. .+.+++|+|||++++|+++||||||+|.|++||+|||||
T Consensus 99 ~~~~~~~~~~~i~~vv~i~~~i~~~qe~ka~~~l~~l~~~-~~~~~~ViRdg~~~~I~~~~lv~GDiv~l~~Gd~IPaD~ 177 (997)
T TIGR01106 99 PQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNM-VPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDRIPADL 177 (997)
T ss_pred cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCCeeEEEECCEEEEeeHHHCCCCCEEEECCCCEEeeeE
Confidence 1224689999888888888888889999988888888765 456899999999999999999999999999999999999
Q ss_pred EEEecCceeeecCCCCCCCCceeecCCC--------CceeeecceEeeCceEEEEEEecccchhHHHHhhcCCCCCCCCh
Q 001616 268 LFLDGHSLQVDESSMTGESDHVEVDSTN--------NPFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSSISSDSNERTP 339 (1044)
Q Consensus 268 ill~g~~l~VDES~LTGEs~pv~k~~~~--------~~~l~sGt~v~~G~~~~~V~~vG~~T~~gki~~~~~~~~~~~tp 339 (1044)
++++|+++.||||+|||||.|+.|.+.. .+++|+||.|.+|.+.++|++||.+|+.|++.+.+.+.+.+++|
T Consensus 178 ~il~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~p 257 (997)
T TIGR01106 178 RIISAQGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTARGIVVNTGDRTVMGRIASLASGLENGKTP 257 (997)
T ss_pred EEEEccCcEEEccccCCCCCceeccCCCcccCccccCCeEEeccEeeeeeEEEEEEEccccchhhHHHhhhhhcccCCCc
Confidence 9999988899999999999999997531 25899999999999999999999999999999988877788999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccccCCCCCCcchhHHHHHHHHHHHHHHHHHHhcchhHH
Q 001616 340 LQARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAAAVTIVVVAIPEGLPL 419 (1044)
Q Consensus 340 lq~~l~~la~~i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~ilvvavP~gLpl 419 (1044)
+|+++++++..+..+++++++++++++.+ .+. .+...+..++++++++||||||+
T Consensus 258 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~----------------------~~~~~~~~~i~v~v~~iP~~L~~ 312 (997)
T TIGR01106 258 IAIEIEHFIHIITGVAVFLGVSFFILSLI---LGY----------------------TWLEAVIFLIGIIVANVPEGLLA 312 (997)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hcC----------------------CHHHHHHHHHHHHhhcCCccchH
Confidence 99999999999998888877776665422 220 34456778899999999999999
Q ss_pred HHHHHHHHHHHhhccccceeccchhhhcccCeeEEeeCcccccccCceEEEEEEeccccccccccc-----cCC--hHHH
Q 001616 420 AVTLTLAYSMKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKFWLGQESIVQETYC-----KIA--SSIR 492 (1044)
Q Consensus 420 avtl~la~~~~~m~k~~~lvr~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~-----~~~--~~~~ 492 (1044)
++++++++++++|+++|++||+++++|+||++|+||||||||||+|+|+|+++|+++..+..+... ..+ ....
T Consensus 313 ~v~i~l~~~~~~m~~~~ilvk~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (997)
T TIGR01106 313 TVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSGVSFDKSSATW 392 (997)
T ss_pred HHHHHHHHHHHHHHHCCcEecCcHHHHHhcCCCEEEECCCCceecCceEEEEEEECCeEEecCCccCCCCccCCcccHHH
Confidence 999999999999999999999999999999999999999999999999999999876544321100 011 1233
Q ss_pred HHHHHHHhhcCCccccccCCCCC----cceecCChhHHHHHHHHHHHcCCChHHhhhcccEEEEecCCCCCceEEEEEEe
Q 001616 493 DLFHQGVGLNTTGSVSKLKPGSS----VAEFSGSPTEKAVLSWAVLEMGMEMDKVKQKYSILHVETFNSEKKRSGVLIRR 568 (1044)
Q Consensus 493 ~~l~~~i~~n~~~~~~~~~~~~~----~~~~~gsp~e~All~~a~~~~g~~~~~~~~~~~il~~~pF~s~rkrmsvvv~~ 568 (1044)
+.+...+++|+++.... +.++ ..+..|||+|.||++++. +.+.+....+..+++++.+||+|+||||+++++.
T Consensus 393 ~~ll~~~alcn~~~~~~--~~~~~~~~~~~~~gdp~E~ALl~~a~-~~~~~~~~~~~~~~~v~~~pF~s~rK~m~~v~~~ 469 (997)
T TIGR01106 393 LALSRIAGLCNRAVFKA--GQENVPILKRAVAGDASESALLKCIE-LCLGSVMEMRERNPKVVEIPFNSTNKYQLSIHEN 469 (997)
T ss_pred HHHHHHHHHcCCCeecc--ccCCCcccccccCcChHHHHHHHHHH-HhCCCHHHHHhhCceeEEeccCCCCceEEEEEec
Confidence 34555667777665432 1111 245689999999999998 5566677778889999999999999999998864
Q ss_pred c--CCCeEEEEecCcHHHHHHhcccccccCCeeecCChhhHHHHHHHHHHHHhcccceeeeeeeecCchhhcccchH-HH
Q 001616 569 K--ADNTTHIHWKGAAEIILAMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAYNNDV-KA 645 (1044)
Q Consensus 569 ~--~~~~~~~~~KGA~e~Il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~~A~k~l~~~~~~~~~~~-~~ 645 (1044)
. +++++++|+|||||.|+++|+++. .+|+..+++++.++.+++.+++|+++|+||+++|||.++.++....... ..
T Consensus 470 ~~~~~~~~~~~~KGApe~Il~~c~~~~-~~g~~~~l~~~~~~~~~~~~~~~a~~GlRvla~A~k~l~~~~~~~~~~~~~~ 548 (997)
T TIGR01106 470 EDPRDPRHLLVMKGAPERILERCSSIL-IHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQFDTD 548 (997)
T ss_pred cCCCCceEEEEEeCChHHHHHHhhHHh-cCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEeecCcccccccccccch
Confidence 3 234588999999999999999876 5788899999999999999999999999999999999874321110000 01
Q ss_pred hhhhcccCeEEEEEecccCCCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCcccccc---------------
Q 001616 646 RQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQ--------------- 710 (1044)
Q Consensus 646 ~~~~~e~~l~llG~vgi~D~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~~~~~--------------- 710 (1044)
..+..|+||+|+|+++++||+|||++++|++|+++||+|+|+|||+..||.++|+++||++++..
T Consensus 549 ~~~~~e~~L~flGli~i~Dplr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~ 628 (997)
T TIGR01106 549 DVNFPTDNLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQ 628 (997)
T ss_pred hhhccccCcEEEEEEeccCCChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccc
Confidence 11234889999999999999999999999999999999999999999999999999999864321
Q ss_pred ----cccceeecchhhhcCCHHHHHHHhcccc--EEeecChhhHHHHHHHHHhcCCEEEEEcCCcCCHHHHhhCCcceee
Q 001616 711 ----VEKGEVVEGVEFRNYTDEERIQKVDKIR--VMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSM 784 (1044)
Q Consensus 711 ----~~~~~vi~g~~~~~~~~~~~~~~~~~~~--V~ar~sP~~K~~lV~~lq~~g~vVa~~GDG~NDapaLk~AdVGiam 784 (1044)
.....+++|++++.++++++.+.++++. ||||++|+||+++|+.||+.|++|||+|||+||+||||+|||||||
T Consensus 629 ~~~~~~~~~vi~G~~l~~l~~~el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVGiam 708 (997)
T TIGR01106 629 VNPRDAKACVVHGSDLKDMTSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAM 708 (997)
T ss_pred cccccccceEEEhHHhhhCCHHHHHHHHHhcCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhCCcceec
Confidence 0123799999999999999999998875 9999999999999999999999999999999999999999999999
Q ss_pred CCCchHHHhhccCEEEccCChhHHHHHHHHhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHhhhh
Q 001616 785 GIQGTEVAKESSDIVILDDDFTSVATVLRWGRCVYTNIQKFIQFQLTVNVAALVINFIAAVSAGEVPLTAVQLLWVNLIM 864 (1044)
Q Consensus 785 g~~gt~vAk~aaDivl~dd~f~~I~~~i~~GR~~~~ni~k~i~f~l~~nv~~~~~~~~~~~~~~~~pl~~~qlL~~nli~ 864 (1044)
|++|+|+||++||++|+||||++|+++++|||++|+||+|+++|+++.|+..+++.+++.++..++||+++|+||+|+++
T Consensus 709 g~~G~~vak~aADivL~dd~f~~Iv~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qlL~inli~ 788 (997)
T TIGR01106 709 GIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLGTITILCIDLGT 788 (997)
T ss_pred CCcccHHHHHhhceEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCcchhHHHHHHHHHHHH
Confidence 98999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHhccCCCCcccccCCCCCC-CCCcccHHHHHHHH-HHHHHHHHHHHHHHHh-----c---ccccCC--------
Q 001616 865 DTLGALALATDRPTDELMQRPPVGR-TEPLITNIMWRNLL-SQALYQITILLILQFK-----G---ESIFNV-------- 926 (1044)
Q Consensus 865 d~l~alala~e~p~~~lm~~~P~~~-~~~li~~~~~~~i~-~~~~~q~~v~~~l~~~-----~---~~~~~~-------- 926 (1044)
|++|+++|++|||++++|+|||+.+ .++++++.+|..++ ..++++.++.++.++. | ...+++
T Consensus 789 d~lp~~al~~e~~~~~~m~~~P~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 868 (997)
T TIGR01106 789 DMVPAISLAYEKAESDIMKRQPRNPKTDKLVNERLISMAYGQIGMIQALGGFFTYFVILAENGFLPLHLVGLRVQWDDRW 868 (997)
T ss_pred HHHHHHHHhcCCCCcccccCCCcCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcccccccccccccccc
Confidence 9999999999999999999999985 68999998776643 3355554433332221 1 011111
Q ss_pred -C------------------cccccchhhhHHHHHHHHHHhhhcccccccccccccccHHHHHHHHHHHHHHHHH--HHH
Q 001616 927 -S------------------PEVNDTLIFNTFVFCQVFNEFNARKLEKRNVFKGIHKNKLFLGIIGITVVLQVVM--VEF 985 (1044)
Q Consensus 927 -~------------------~~~~~t~~f~~~v~~q~fn~~n~r~~~~~~~f~~~~~n~~f~~~i~~~~~~qv~~--v~~ 985 (1044)
+ ....+|+.|++|+++|+||.+|||+ ++.++|++.++|++++.++++.+++++++ +++
T Consensus 869 ~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~R~-~~~~~f~~~~~n~~l~~~~~~~~~l~~~~~~~p~ 947 (997)
T TIGR01106 869 INDLEDSYGQEWTYEQRKYVEFTCHTAFFVSIVVVQWADLIICKT-RRNSVFQQGMKNKILIFGLFEETALAAFLSYCPG 947 (997)
T ss_pred ccccccccccccchhcccchhhhhhHHHHHHHHHHHHHHHHHhcc-CcccccccCCcCHHHHHHHHHHHHHHHHHHHhhh
Confidence 0 0146899999999999999999999 46678875589999999888888887665 456
Q ss_pred hhHhhccCCCChHHHHHHHHHHHHHHHHHHHhhhcc
Q 001616 986 LKKFADTERLNWQQWLACIAMAAFTWPIGWAVKFIP 1021 (1044)
Q Consensus 986 ~~~~f~~~~l~~~~w~~~i~~~~~~~~~~~~~k~i~ 1021 (1044)
++.+|++.||++.+|++|++++++.+++.++.|++.
T Consensus 948 ~~~~f~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~ 983 (997)
T TIGR01106 948 MGVALRMYPLKPTWWFCAFPYSLLIFVYDEIRKLII 983 (997)
T ss_pred hHHHhccccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999999999999999999999765
No 7
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.8e-141 Score=1328.12 Aligned_cols=842 Identities=35% Similarity=0.553 Sum_probs=738.4
Q ss_pred HHHHHhCCCcCCCCCcCHHHHHHHHhhcCCCcCCCCCCCcHHHHHHHHhhhhHHHHHHHHHHHHHhhccccCCCCccccc
Q 001616 116 GVANALGTNPEYGINGNDEDVSRRSQLFGANTYHKPPPKGLLHFVLEAFKDTTILILLVCAALSLGFGIKEHGAEEGWYE 195 (1044)
Q Consensus 116 ~l~~~l~t~~~~GL~~~~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~illv~a~lsl~~gi~~~g~~~~~~d 195 (1044)
.+...+.++...||+.++ +.+|++.||.|+++..+..++|..++.+|.+++.++|++++++|+.++....+. .+
T Consensus 32 ~~~~~~~~~~~~GLs~~e--~~~r~~~~G~N~~~~~~~~~~~~~fl~~f~~~~~~iL~~~a~~s~~~~~~~~~~----~~ 105 (917)
T COG0474 32 ELLLELFTSPTTGLSEEE--VKRRLKKYGPNELPEEKKRSLLKKFLRQFKDPFIILLLVAALLSAFVGDWVDAG----VD 105 (917)
T ss_pred hHHHhhcCCcccCCCHHH--HHHHHhhcCCccccccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccC----cc
Confidence 566678888899999955 999999999999999999999999999999999999999999999998321100 55
Q ss_pred hhHHHHHHHHHHHHhHHHHHHHHHHHHHhhcccCCceEEEEeCCeEEEEeecccccCcEEEeCCCCeeeccEEEEecCce
Q 001616 196 GGSIFVAVFLVIVVSAFSNFRQARQFDKLSKISNNIKVEVVREARRLQISIFDLVVGDIVFLKIGDQIPADGLFLDGHSL 275 (1044)
Q Consensus 196 ~~~i~~~v~lv~~v~a~~~~~~~~~~~~l~~~~~~~~v~ViR~G~~~~I~~~dLvvGDIV~l~~Gd~VPADgill~g~~l 275 (1044)
...|+..++++.++..+++|+.++..++|.+.. +.+++|+|||++++|+++||||||||.|++||+||||++|++++++
T Consensus 106 ~~~I~~~i~~n~~~g~~qe~~a~~~l~~lk~~~-~~~~~V~R~g~~~~i~a~eLVpGDiV~l~~gd~vPAD~rLl~~~~l 184 (917)
T COG0474 106 AIVILLVVVINALLGFVQEYRAEKALEALKKMS-SPKAKVLRDGKFVEIPASELVPGDIVLLEAGDVVPADLRLLESSDL 184 (917)
T ss_pred eeeehHHHHHHHHHHHHHHHHHHHHHHHHHhhc-cCceEEEeCCcEEEecHHHCCCCcEEEECCCCccccceEEEEecCc
Confidence 668888888899999999999999999998764 6799999999999999999999999999999999999999999999
Q ss_pred eeecCCCCCCCCceeecC------------CCCceeeecceEeeCceEEEEEEecccchhHHHHhhcCCCCCCCChhHHH
Q 001616 276 QVDESSMTGESDHVEVDS------------TNNPFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSSISSDSNERTPLQAR 343 (1044)
Q Consensus 276 ~VDES~LTGEs~pv~k~~------------~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~gki~~~~~~~~~~~tplq~~ 343 (1044)
.||||+|||||.|+.|.+ +.++++|+||.|..|.+.++|++||++|+.|++...+.......||+|++
T Consensus 185 ~VdEs~LTGES~pv~K~~~~~~~~~~~~~~d~~n~l~sGt~V~~G~~~giVvaTG~~T~~G~ia~~~~~~~~~~t~l~~~ 264 (917)
T COG0474 185 EVDESALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLLPTKKEVKTPLQRK 264 (917)
T ss_pred eEEcccccCCCcchhccccccccccccccCCccceEEeCCEEEcceEEEEEEEEcCccHHHHHHHhhccccccCCcHHHH
Confidence 999999999999999973 34689999999999999999999999999999999998776889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccccCCCCCCcchhHHHHHHHHHHHHHHHHHHhcchhHHHHHH
Q 001616 344 LDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAAAVTIVVVAIPEGLPLAVTL 423 (1044)
Q Consensus 344 l~~la~~i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~ilvvavP~gLplavtl 423 (1044)
++++...+..++++++++++++. ++.+.. .+...+..++++++.++|||||+.+|+
T Consensus 265 l~~~~~~l~~~~l~~~~~~~~~~---~~~~~~---------------------~~~~~~~~~v~l~va~IPegLp~~vti 320 (917)
T COG0474 265 LNKLGKFLLVLALVLGALVFVVG---LFRGGN---------------------GLLESFLTALALAVAAVPEGLPAVVTI 320 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH---HHhcCc---------------------cHHHHHHHHHHHHHhccccchHHHHHH
Confidence 99999999999998888887775 222210 256789999999999999999999999
Q ss_pred HHHHHHHhhccccceeccchhhhcccCeeEEeeCcccccccCceEEEEEEecc--ccccccccccCChHHHHHHHHHHhh
Q 001616 424 TLAYSMKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKFWLGQ--ESIVQETYCKIASSIRDLFHQGVGL 501 (1044)
Q Consensus 424 ~la~~~~~m~k~~~lvr~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~i~~ 501 (1044)
++++++++|.+++++||+++++|+||++|+||||||||||+|+|+|++++..+ .... +.....++... .+...+++
T Consensus 321 ~la~g~~~mak~~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~~~~~~-~~~~~~~~~~~-~~l~~~~l 398 (917)
T COG0474 321 ALALGAQRMAKDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGGGKDID-DKDLKDSPALL-RFLLAAAL 398 (917)
T ss_pred HHHHHHHHHHhccchhhccchhhhccCccEEEecCCCCCccCeEEEEEEEeCCCccccc-ccccccchHHH-HHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999984 2111 11111122222 34455567
Q ss_pred cCCccccccCCCCCcceecCChhHHHHHHHHHHHcCC--ChHHhhhcccEEEEecCCCCCceEEEEEEecCCCeEEEEec
Q 001616 502 NTTGSVSKLKPGSSVAEFSGSPTEKAVLSWAVLEMGM--EMDKVKQKYSILHVETFNSEKKRSGVLIRRKADNTTHIHWK 579 (1044)
Q Consensus 502 n~~~~~~~~~~~~~~~~~~gsp~e~All~~a~~~~g~--~~~~~~~~~~il~~~pF~s~rkrmsvvv~~~~~~~~~~~~K 579 (1044)
||+..... + + ++..|||+|.||++++. +.|. +....+..+++++.+||+|+||||+++++..+++ +++++|
T Consensus 399 c~~~~~~~---~-~-~~~~gdptE~Al~~~a~-~~~~~~~~~~~~~~~~~~~~~PFdS~rKrMsviv~~~~~~-~~~~~K 471 (917)
T COG0474 399 CNSVTPEK---N-G-WYQAGDPTEGALVEFAE-KLGFSLDLSGLEVEYPILAEIPFDSERKRMSVIVKTDEGK-YILFVK 471 (917)
T ss_pred cCcccccc---c-C-ceecCCccHHHHHHHHH-hcCCcCCHHHHhhhcceeEEecCCCCceEEEEEEEcCCCc-EEEEEc
Confidence 77665543 2 3 78899999999999998 8888 7888888899999999999999999999966655 899999
Q ss_pred CcHHHHHHhcccccccCCeeecCChhhHHHHHHHHHHHHhcccceeeeeeeecCchhhcccchHHHhhhhcccCeEEEEE
Q 001616 580 GAAEIILAMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAYNNDVKARQRLKEEGLTLLGI 659 (1044)
Q Consensus 580 GA~e~Il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~~A~k~l~~~~~~~~~~~~~~~~~~e~~l~llG~ 659 (1044)
||||.|+++|++. |+..+++++.++.+++..++|+++|||++++|||.++.++.... . +..|+||+|+|+
T Consensus 472 GApe~il~~~~~~----~~~~~~~~~~~~~~~~~~~~la~~glRvla~A~k~~~~~~~~~~-----~-~~~E~dl~~lGl 541 (917)
T COG0474 472 GAPEVILERCKSI----GELEPLTEEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDDE-----V-DEIESDLVFLGL 541 (917)
T ss_pred CChHHHHHHhccc----CcccccCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccccch-----h-hhhhccceeehh
Confidence 9999999999986 77788999999999999999999999999999998764322111 1 567899999999
Q ss_pred ecccCCCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCcccccccccceeecchhhhcCCHHHHHHHhccccE
Q 001616 660 VGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRV 739 (1044)
Q Consensus 660 vgi~D~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V 739 (1044)
+||+||||+||+++|+.|++|||+|||+||||+.||++||++|||..+... +.+++|.+++.++++|+.+.++++.|
T Consensus 542 ~g~~Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~~Gi~~~~~~---~~vi~G~el~~l~~~el~~~~~~~~V 618 (917)
T COG0474 542 TGIEDPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAES---ALVIDGAELDALSDEELAELVEELSV 618 (917)
T ss_pred hhccCCCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHHcCCCCCCCc---eeEeehHHhhhcCHHHHHHHhhhCcE
Confidence 999999999999999999999999999999999999999999999875211 56999999999999999999999999
Q ss_pred EeecChhhHHHHHHHHHhcCCEEEEEcCCcCCHHHHhhCCcceeeCCCchHHHhhccCEEEccCChhHHHHHHHHhHHHH
Q 001616 740 MARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLRWGRCVY 819 (1044)
Q Consensus 740 ~ar~sP~~K~~lV~~lq~~g~vVa~~GDG~NDapaLk~AdVGiamg~~gt~vAk~aaDivl~dd~f~~I~~~i~~GR~~~ 819 (1044)
|||+||+||.++|+.||++|++|||||||+|||||||+||||||||++|+|+||++||+++.||||++|+.+++|||++|
T Consensus 619 fARvsP~qK~~IV~~lq~~g~vVamtGDGvNDapALk~ADVGIamg~~Gtdaak~Aadivl~dd~~~~i~~av~eGR~~~ 698 (917)
T COG0474 619 FARVSPEQKARIVEALQKSGHVVAMTGDGVNDAPALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVY 698 (917)
T ss_pred EEEcCHHHHHHHHHHHHhCCCEEEEeCCCchhHHHHHhcCccEEecccHHHHHHhhcceEeecCcHHHHHHHHHHhHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHhcCC-CchhHHHHHHHhhhhhHHHHHHhccCCCCcccccCCCCCCCCCcccHHH
Q 001616 820 TNIQKFIQFQLTVNVAALVINFIAAVSAGE-VPLTAVQLLWVNLIMDTLGALALATDRPTDELMQRPPVGRTEPLITNIM 898 (1044)
Q Consensus 820 ~ni~k~i~f~l~~nv~~~~~~~~~~~~~~~-~pl~~~qlL~~nli~d~l~alala~e~p~~~lm~~~P~~~~~~li~~~~ 898 (1044)
.|++|+++|.++.|+..+++.+++.++..+ .|++++|+||+|+++|.+|+++|+.++|+.++|++||+++.++++++..
T Consensus 699 ~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~~~p~~~~qll~inll~d~~pa~~L~~~~~~~~~m~~~~~~p~~~i~~~~~ 778 (917)
T COG0474 699 VNIKKFILYLLSKNVGEVLTLLIYSLFNLFFLPLTPLQLLWINLLTDSLPALALGVEDPESDVMKRPPRGPEEGLFNRKI 778 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhhhhhheeecCCCcccccccCCCCccccccchhH
Confidence 999999999999999999999999888877 9999999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccccCCC--------cccccchhhhHHHHHHHHHHhhhcccccccccc-cccccHHHH
Q 001616 899 WRNLLSQALYQITILLILQFKGESIFNVS--------PEVNDTLIFNTFVFCQVFNEFNARKLEKRNVFK-GIHKNKLFL 969 (1044)
Q Consensus 899 ~~~i~~~~~~q~~v~~~l~~~~~~~~~~~--------~~~~~t~~f~~~v~~q~fn~~n~r~~~~~~~f~-~~~~n~~f~ 969 (1044)
+..++.+..++.+++.++.|......... .....|+.|.+++++|.++.+++|.. ..++|+ +++.|+.++
T Consensus 779 ~~~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~~~~-~~~~~~~~~~~n~~~~ 857 (917)
T COG0474 779 FWRFILIIGLLSAILFILTFLLYLLGFIANTLGLDLFQALLQTTAFTVLVLIQLLLTLAVRSR-GRPFLSSLLFSNKYLW 857 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcc-ccchhhcccccCHHHH
Confidence 88877777777666654444332222111 34578999999999999999999985 345565 568999999
Q ss_pred HHHHHHHHHHHHHHH--Hhh-HhhccCCCChHHHHHHHHHHHHHH
Q 001616 970 GIIGITVVLQVVMVE--FLK-KFADTERLNWQQWLACIAMAAFTW 1011 (1044)
Q Consensus 970 ~~i~~~~~~qv~~v~--~~~-~~f~~~~l~~~~w~~~i~~~~~~~ 1011 (1044)
++++++++++++.+. ++. ..|.+.+++..+|+++++......
T Consensus 858 ~~~~~~~~l~l~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~ 902 (917)
T COG0474 858 LALLVIIILQLLIIFLPPLNLKIFQPTPLSLFEWLIAIAVALLLL 902 (917)
T ss_pred HHHHHHHHHHHHHHHhHHhHhhhccCCCCcHHHHHHHHHHHHHHH
Confidence 999999998887653 455 689999999999998888774443
No 8
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=100.00 E-value=8.4e-138 Score=1306.66 Aligned_cols=839 Identities=32% Similarity=0.481 Sum_probs=721.5
Q ss_pred HHHHhhhhHHHHHHHHHHHHHhhccccCCCC--ccccchhHHHHHHHHHHHHhHHHHHHHHHHHHHhhcccCCceEEEEe
Q 001616 160 VLEAFKDTTILILLVCAALSLGFGIKEHGAE--EGWYEGGSIFVAVFLVIVVSAFSNFRQARQFDKLSKISNNIKVEVVR 237 (1044)
Q Consensus 160 ~~~~~~~~~~~illv~a~lsl~~gi~~~g~~--~~~~d~~~i~~~v~lv~~v~a~~~~~~~~~~~~l~~~~~~~~v~ViR 237 (1044)
++++|+++++++|+++|++|+++++.+++.. ..|+|++.|++.++++.+++.++++++++..++|.+. .+.+++|+|
T Consensus 1 ~~~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~Il~vi~~~~~i~~~qe~~a~~~~~~L~~~-~~~~~~ViR 79 (917)
T TIGR01116 1 VLEQFEDLLVRILLLAACVSFVLAWFEEGEETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEALKEY-ESEHAKVLR 79 (917)
T ss_pred ChHHHhCHHHHHHHHHHHHHHHHhcccccccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCCceEEEE
Confidence 4789999999999999999999987654332 4799999999999999999999999999999999865 567899999
Q ss_pred CCeEEEEeecccccCcEEEeCCCCeeeccEEEEecCceeeecCCCCCCCCceeecCC-----------CCceeeecceEe
Q 001616 238 EARRLQISIFDLVVGDIVFLKIGDQIPADGLFLDGHSLQVDESSMTGESDHVEVDST-----------NNPFLFSGSKVA 306 (1044)
Q Consensus 238 ~G~~~~I~~~dLvvGDIV~l~~Gd~VPADgill~g~~l~VDES~LTGEs~pv~k~~~-----------~~~~l~sGt~v~ 306 (1044)
||++++|+++||||||||.|++||+|||||++++|+++.||||+|||||.|+.|.+. .++++|+||.|.
T Consensus 80 dg~~~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~n~l~~GT~v~ 159 (917)
T TIGR01116 80 DGRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKTLRVDQSILTGESVSVNKHTESVPDERAVNQDKKNMLFSGTLVV 159 (917)
T ss_pred CCEEEEEEHHHCCCCCEEEECCCCEeeccEEEEEecceEEEcccccCCCCcccccccccCccccCcccccceeeeCCEEe
Confidence 999999999999999999999999999999999998899999999999999999742 238999999999
Q ss_pred eCceEEEEEEecccchhHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccccCC
Q 001616 307 DGYAQMLVVSVGMNTAWGEMMSSISSDSNERTPLQARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNG 386 (1044)
Q Consensus 307 ~G~~~~~V~~vG~~T~~gki~~~~~~~~~~~tplq~~l~~la~~i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~ 386 (1044)
+|+++++|++||.+|+.||+.+++.+.+.++||+|+++++++..+..+++++++++++++..++... . +.
T Consensus 160 ~G~~~~~V~~tG~~T~~gki~~~~~~~~~~~t~lq~~l~~~~~~l~~~~~~~~~i~~~~~~~~~~~~-~--------~~- 229 (917)
T TIGR01116 160 AGKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQKKLDEFGELLSKVIGLICILVWVINIGHFNDP-A--------LG- 229 (917)
T ss_pred cceEEEEEEEeCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-c--------cc-
Confidence 9999999999999999999999998888889999999999999998888877777766543322110 0 00
Q ss_pred CCCCcchhHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhhccccceeccchhhhcccCeeEEeeCcccccccCc
Q 001616 387 SNTDIDDVFNAVVSIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQ 466 (1044)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~ai~ilvvavP~gLplavtl~la~~~~~m~k~~~lvr~~~a~E~Lg~v~~Ic~DKTGTLT~n~ 466 (1044)
...+..+...+..++++++++||||||+++++++++++++|+++|++||+++++|+||++|+||||||||||+|+
T Consensus 230 -----~~~~~~~~~~~~~~i~l~v~~iP~~Lp~~vti~l~~~~~~m~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~ 304 (917)
T TIGR01116 230 -----GGWIQGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQ 304 (917)
T ss_pred -----chhHHHHHHHHHHHHhhhhhccccccHHHHHHHHHHHHHHHHHCCcEecCcHHHHhccCceEEEecCCccccCCe
Confidence 011225566777889999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEEeccccc-------------ccccc--c------cCChHHHHHHHHHHhhcCCccccccCCCCCcceecCChhH
Q 001616 467 MKVTKFWLGQESI-------------VQETY--C------KIASSIRDLFHQGVGLNTTGSVSKLKPGSSVAEFSGSPTE 525 (1044)
Q Consensus 467 m~v~~~~~~~~~~-------------~~~~~--~------~~~~~~~~~l~~~i~~n~~~~~~~~~~~~~~~~~~gsp~e 525 (1044)
|+|.+++..+... .+... . .......+.+....++|+++..... +.++.....|||+|
T Consensus 305 m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~-~~~~~~~~~gdp~E 383 (917)
T TIGR01116 305 MSVCKVVALDPSSSSLNEFCVTGTTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDSSLDFN-ERKGVYEKVGEATE 383 (917)
T ss_pred EEEEEEEecCCcccccceEEecCCccCCCccccccCCcccccchHHHHHHHHHHHhcCCCeeecc-ccCCceeeccChhH
Confidence 9999998765311 11000 0 0011223445556677777665431 12223345799999
Q ss_pred HHHHHHHHHHcCCChHH----------------hhhcccEEEEecCCCCCceEEEEEEecCCCeEEEEecCcHHHHHHhc
Q 001616 526 KAVLSWAVLEMGMEMDK----------------VKQKYSILHVETFNSEKKRSGVLIRRKADNTTHIHWKGAAEIILAMC 589 (1044)
Q Consensus 526 ~All~~a~~~~g~~~~~----------------~~~~~~il~~~pF~s~rkrmsvvv~~~~~~~~~~~~KGA~e~Il~~c 589 (1044)
.||++++. +.|.+... .++++++++.+||+|+||||+++++.+ + ++++|+|||||.|+++|
T Consensus 384 ~ALl~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rK~msviv~~~-~-~~~~~~KGApe~il~~c 460 (917)
T TIGR01116 384 AALKVLVE-KMGLPATKNGVSSKRRPALGCNSVWNDKFKKLATLEFSRDRKSMSVLCKPS-T-GNKLFVKGAPEGVLERC 460 (917)
T ss_pred HHHHHHHH-HcCCCchhcccccccccccchhHHHHhhcceeeecccChhhCeEEEEEeeC-C-cEEEEEcCChHHHHHhc
Confidence 99999998 88876542 245688999999999999999999864 3 37899999999999999
Q ss_pred ccccccCCeeecCChhhHHHHHHHHHHHHh-cccceeeeeeeecCchhhcccchHHHhhhhcccCeEEEEEecccCCCch
Q 001616 590 SHYYESNGVIKSMDGNGRSQMENIIHGMAA-SSLRCIAFAYKQVSEEETAYNNDVKARQRLKEEGLTLLGIVGIKDPCRP 668 (1044)
Q Consensus 590 ~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~-~glR~l~~A~k~l~~~~~~~~~~~~~~~~~~e~~l~llG~vgi~D~lR~ 668 (1044)
++++..+|...+++++.++++++.+++|++ +|+||+++|||.++.++...........+..|+||+|+|+++++||+||
T Consensus 461 ~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~~~Dplr~ 540 (917)
T TIGR01116 461 THILNGDGRAVPLTDKMKNTILSVIKEMGTTKALRCLALAFKDIPDPREEDLLSDPANFEAIESDLTFIGVVGMLDPPRP 540 (917)
T ss_pred cceecCCCCeeeCCHHHHHHHHHHHHHHHhhcCCeEEEEEEEECCccccccccccchhhhhhcCCcEEEEEeeeeCCCch
Confidence 998887888899999999999999999999 9999999999998643211100001122456899999999999999999
Q ss_pred hHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCcccccccccceeecchhhhcCCHHHHHHHhccccEEeecChhhH
Q 001616 669 GVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPFDK 748 (1044)
Q Consensus 669 ~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~ar~sP~~K 748 (1044)
+++++|+.||++||+++|+|||+..||.++|+++||..++.+. ...+++|++++.++++++.+..++..||||++|+||
T Consensus 541 ~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~v-~~~~~~g~~l~~~~~~~~~~~~~~~~v~ar~~P~~K 619 (917)
T TIGR01116 541 EVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDV-TFKSFTGREFDEMGPAKQRAACRSAVLFSRVEPSHK 619 (917)
T ss_pred hHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHcCCCCCCccc-cceeeeHHHHhhCCHHHHHHhhhcCeEEEecCHHHH
Confidence 9999999999999999999999999999999999998643211 235789999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCEEEEEcCCcCCHHHHhhCCcceeeCCCchHHHhhccCEEEccCChhHHHHHHHHhHHHHHhHHHHHHH
Q 001616 749 LLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLRWGRCVYTNIQKFIQF 828 (1044)
Q Consensus 749 ~~lV~~lq~~g~vVa~~GDG~NDapaLk~AdVGiamg~~gt~vAk~aaDivl~dd~f~~I~~~i~~GR~~~~ni~k~i~f 828 (1044)
.++|+.+|+.|++|+|+|||+||+||||+|||||||| +|+++||++||+++.||||++|+++++|||++|+|++|+++|
T Consensus 620 ~~iV~~lq~~g~~va~iGDG~ND~~alk~AdVGia~g-~g~~~ak~aAD~vl~dd~f~~i~~~i~~GR~~~~ni~k~i~~ 698 (917)
T TIGR01116 620 SELVELLQEQGEIVAMTGDGVNDAPALKKADIGIAMG-SGTEVAKEASDMVLADDNFATIVAAVEEGRAIYNNMKQFIRY 698 (917)
T ss_pred HHHHHHHHhcCCeEEEecCCcchHHHHHhCCeeEECC-CCcHHHHHhcCeEEccCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999 899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHhhhhhHHHHHHhccCCCCcccccCCCCCCCCCcccHHHHHHHHHHHHH
Q 001616 829 QLTVNVAALVINFIAAVSAGEVPLTAVQLLWVNLIMDTLGALALATDRPTDELMQRPPVGRTEPLITNIMWRNLLSQALY 908 (1044)
Q Consensus 829 ~l~~nv~~~~~~~~~~~~~~~~pl~~~qlL~~nli~d~l~alala~e~p~~~lm~~~P~~~~~~li~~~~~~~i~~~~~~ 908 (1044)
++++|+..+++.+++.++..+.||+++|++|+|+++|.+|+++|++|||++++|++||+.++++++++.+|+.+++++++
T Consensus 699 ~l~~ni~~~~~~~~~~~~~~~~pl~~~qll~inli~d~lp~~~l~~~~~~~~~m~~pP~~~~~~l~~~~~~~~~~~~g~~ 778 (917)
T TIGR01116 699 MISSNIGEVVCIFLTAALGIPEGLIPVQLLWVNLVTDGLPATALGFNPPDKDIMWKPPRRPDEPLITGWLFFRYLVVGVY 778 (917)
T ss_pred HHhccHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHhcCCcchhHhcCCCCCCCCCcccHHHHHHHHHHHHH
Confidence 99999999999999988888899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcc---cccC--------C------------CcccccchhhhHHHHHHHHHHhhhcccccccccc-cccc
Q 001616 909 QITILLILQFKGE---SIFN--------V------------SPEVNDTLIFNTFVFCQVFNEFNARKLEKRNVFK-GIHK 964 (1044)
Q Consensus 909 q~~v~~~l~~~~~---~~~~--------~------------~~~~~~t~~f~~~v~~q~fn~~n~r~~~~~~~f~-~~~~ 964 (1044)
|.++.+..+++.. .+.+ . ....++|++|++|+++|+||.+|||+. +.++|+ ++++
T Consensus 779 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~r~~-~~~~~~~~~~~ 857 (917)
T TIGR01116 779 VGLATVGGFVWWYLLTHFTGCDEDSFTTCPDFEDPDCYVFEGKQPARTISLSVLVVIEMFNALNALSE-DQSLLRMPPWV 857 (917)
T ss_pred HHHHHHHHHHHHHhhcCcccccccccccccccccccccccccccchHHHHHHHHHHHHHHHHHHHcCC-cccccccCCcc
Confidence 9876433322111 1100 0 124568999999999999999999994 567786 8899
Q ss_pred cHHHHHHHHHHHHHHHHH--HHHhhHhhccCCCChHHHHHHHHHHHHHHHHHHHhhhcc
Q 001616 965 NKLFLGIIGITVVLQVVM--VEFLKKFADTERLNWQQWLACIAMAAFTWPIGWAVKFIP 1021 (1044)
Q Consensus 965 n~~f~~~i~~~~~~qv~~--v~~~~~~f~~~~l~~~~w~~~i~~~~~~~~~~~~~k~i~ 1021 (1044)
|++|++++++++++|+++ +++++.+|++.|+++.+|++|++++++.+++.++.|++.
T Consensus 858 n~~~~~~~~~~~~l~~~~~~v~~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~~ 916 (917)
T TIGR01116 858 NKWLIGAICLSMALHFLILYVPFLSRIFGVTPLSLTDWLMVLKLSLPVILVDEVLKFFS 916 (917)
T ss_pred CHHHHHHHHHHHHHHHHHHHhHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999887 778999999999999999999999999999999999763
No 9
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=100.00 E-value=3.7e-137 Score=1291.22 Aligned_cols=828 Identities=25% Similarity=0.358 Sum_probs=705.0
Q ss_pred CHHHHHHHhCCCcCCCCCcCHHHHHHHHhhcCCCcCCCCCCCcHHHHHHHHhhhhHHHHHHHHHHHHHhhcccc---CCC
Q 001616 113 GVEGVANALGTNPEYGINGNDEDVSRRSQLFGANTYHKPPPKGLLHFVLEAFKDTTILILLVCAALSLGFGIKE---HGA 189 (1044)
Q Consensus 113 gv~~l~~~l~t~~~~GL~~~~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~illv~a~lsl~~gi~~---~g~ 189 (1044)
..+++.+.|+++ .+||+++| +++|+++||+|+++.++++++|+.++++|++++.++|++++++|++++... .+.
T Consensus 31 ~~~~v~~~l~~~-~~GLs~~e--a~~rl~~~G~N~l~~~~~~~~~~~~l~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~ 107 (903)
T PRK15122 31 SLEETLANLNTH-RQGLTEED--AAERLQRYGPNEVAHEKPPHALVQLLQAFNNPFIYVLMVLAAISFFTDYWLPLRRGE 107 (903)
T ss_pred CHHHHHHHhCCC-CCCCCHHH--HHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCCc
Confidence 577788889998 48999876 999999999999999999999999999999999999999999999987532 222
Q ss_pred CccccchhHHHHHHHHHHHHhHHHHHHHHHHHHHhhcccCCceEEEEeCC------eEEEEeecccccCcEEEeCCCCee
Q 001616 190 EEGWYEGGSIFVAVFLVIVVSAFSNFRQARQFDKLSKISNNIKVEVVREA------RRLQISIFDLVVGDIVFLKIGDQI 263 (1044)
Q Consensus 190 ~~~~~d~~~i~~~v~lv~~v~a~~~~~~~~~~~~l~~~~~~~~v~ViR~G------~~~~I~~~dLvvGDIV~l~~Gd~V 263 (1044)
...|.+++.|++.+++..+++.+++|+.++..++|.+.. +..++|+||| ++++|+++||||||+|.|++||+|
T Consensus 108 ~~~~~~~~iI~~~v~l~~~i~~~qe~~a~~a~~~L~~l~-~~~~~V~Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~Gd~I 186 (903)
T PRK15122 108 ETDLTGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMV-RTTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGDMI 186 (903)
T ss_pred cccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCceEEEECCccCCCCeEEEEEHHHCCCCCEEEECCCCEE
Confidence 346999999999999999999999999999999998764 4689999994 889999999999999999999999
Q ss_pred eccEEEEecCceeeecCCCCCCCCceeecCC---------------------CCceeeecceEeeCceEEEEEEecccch
Q 001616 264 PADGLFLDGHSLQVDESSMTGESDHVEVDST---------------------NNPFLFSGSKVADGYAQMLVVSVGMNTA 322 (1044)
Q Consensus 264 PADgill~g~~l~VDES~LTGEs~pv~k~~~---------------------~~~~l~sGt~v~~G~~~~~V~~vG~~T~ 322 (1044)
||||++++|+++.||||+|||||.|+.|.+. .++++|+||.|.+|.++++|++||.+|+
T Consensus 187 PaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~~V~atG~~T~ 266 (903)
T PRK15122 187 PADVRLIESRDLFISQAVLTGEALPVEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVVATGSRTY 266 (903)
T ss_pred eeeEEEEEcCceEEEccccCCCCcceeeeccccccccccccccccccCCcccccceEEeCCEEEeeeEEEEEEEeccccH
Confidence 9999999999999999999999999999741 2478999999999999999999999999
Q ss_pred hHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccccCCCCCCcchhHHHHHHHH
Q 001616 323 WGEMMSSISSDSNERTPLQARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIV 402 (1044)
Q Consensus 323 ~gki~~~~~~~~~~~tplq~~l~~la~~i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (1044)
.||+.+.+.+ ...++|+|+++++++..+..+++.++.+++++. ++... .+...+
T Consensus 267 ~gkI~~~v~~-~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~---~~~~~----------------------~~~~~l 320 (903)
T PRK15122 267 FGSLAKSIVG-TRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLIN---GFTKG----------------------DWLEAL 320 (903)
T ss_pred hhHHHHHhcC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhh---hhccC----------------------CHHHHH
Confidence 9999999876 667899999999999988887766655444332 11110 345677
Q ss_pred HHHHHHHHHHhcchhHHHHHHHHHHHHHhhccccceeccchhhhcccCeeEEeeCcccccccCceEEEEEEecccccccc
Q 001616 403 AAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKFWLGQESIVQE 482 (1044)
Q Consensus 403 ~~ai~ilvvavP~gLplavtl~la~~~~~m~k~~~lvr~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~ 482 (1044)
..++++++++||||||++++++++.++++|+|+|++||+++++|+||++|+||||||||||+|+|+|.+++..+.. .
T Consensus 321 ~~aisl~V~~~Pe~Lp~~vt~~La~g~~~mak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~~~~~~-~-- 397 (903)
T PRK15122 321 LFALAVAVGLTPEMLPMIVSSNLAKGAIAMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRIILEHHLDVSGR-K-- 397 (903)
T ss_pred HHHHHHHHHHccchHHHHHHHHHHHHHHHHHHcCCeecccchhhhhcCCcEEEecCCcccccCeEEEEEEEcCCCC-C--
Confidence 8899999999999999999999999999999999999999999999999999999999999999999998743211 0
Q ss_pred ccccCChHHHHHHHHHHhhcCCccccccCCCCCcceecCChhHHHHHHHHHHHcCCChHHhhhcccEEEEecCCCCCceE
Q 001616 483 TYCKIASSIRDLFHQGVGLNTTGSVSKLKPGSSVAEFSGSPTEKAVLSWAVLEMGMEMDKVKQKYSILHVETFNSEKKRS 562 (1044)
Q Consensus 483 ~~~~~~~~~~~~l~~~i~~n~~~~~~~~~~~~~~~~~~gsp~e~All~~a~~~~g~~~~~~~~~~~il~~~pF~s~rkrm 562 (1044)
.+ +++.. .++|+.. . ...|||+|.|+++++. +.+.+ ..+..++.++.+||+|.+|+|
T Consensus 398 -----~~---~~l~~-a~l~s~~--~---------~~~~~p~e~All~~a~-~~~~~--~~~~~~~~~~~~pF~s~~k~m 454 (903)
T PRK15122 398 -----DE---RVLQL-AWLNSFH--Q---------SGMKNLMDQAVVAFAE-GNPEI--VKPAGYRKVDELPFDFVRRRL 454 (903)
T ss_pred -----hH---HHHHH-HHHhCCC--C---------CCCCChHHHHHHHHHH-HcCch--hhhhcCceEEEeeeCCCcCEE
Confidence 11 22222 2233211 0 1268999999999997 55543 234567889999999999999
Q ss_pred EEEEEecCCCeEEEEecCcHHHHHHhcccccccCCeeecCChhhHHHHHHHHHHHHhcccceeeeeeeecCchhhcccch
Q 001616 563 GVLIRRKADNTTHIHWKGAAEIILAMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAYNND 642 (1044)
Q Consensus 563 svvv~~~~~~~~~~~~KGA~e~Il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~~A~k~l~~~~~~~~~~ 642 (1044)
+++++..+++ +++++|||||.|+++|+++.. +|...+++++.++++.+.+++++++|+|++++|||+++.++...
T Consensus 455 s~v~~~~~~~-~~~~~KGa~e~il~~c~~~~~-~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~~--- 529 (903)
T PRK15122 455 SVVVEDAQGQ-HLLICKGAVEEMLAVATHVRD-GDTVRPLDEARRERLLALAEAYNADGFRVLLVATREIPGGESRA--- 529 (903)
T ss_pred EEEEEcCCCc-EEEEECCcHHHHHHhchhhhc-CCCeecCCHHHHHHHHHHHHHHHhCCCEEEEEEEeccCcccccc---
Confidence 9999875554 789999999999999998654 67788999999999999999999999999999999886422100
Q ss_pred HHHhhhhcccCeEEEEEecccCCCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCcccccccccceeecchhh
Q 001616 643 VKARQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEF 722 (1044)
Q Consensus 643 ~~~~~~~~e~~l~llG~vgi~D~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~g~~~ 722 (1044)
......|+|++|+|+++|+||+|||++++|+.||++||+|+|+||||..||.+||++|||.. ..+++|+++
T Consensus 530 --~~~~~~e~~l~~lGli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~~-------~~vi~G~el 600 (903)
T PRK15122 530 --QYSTADERDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLEP-------GEPLLGTEI 600 (903)
T ss_pred --ccccccccCcEEEEEEeccCccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCC-------CCccchHhh
Confidence 01122477999999999999999999999999999999999999999999999999999953 258999999
Q ss_pred hcCCHHHHHHHhccccEEeecChhhHHHHHHHHHhcCCEEEEEcCCcCCHHHHhhCCcceeeCCCchHHHhhccCEEEcc
Q 001616 723 RNYTDEERIQKVDKIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILD 802 (1044)
Q Consensus 723 ~~~~~~~~~~~~~~~~V~ar~sP~~K~~lV~~lq~~g~vVa~~GDG~NDapaLk~AdVGiamg~~gt~vAk~aaDivl~d 802 (1044)
+.++++++.+.++++.||||++|+||.++|+.||++|++|||||||+|||||||+|||||||| +|||+||++||+||+|
T Consensus 601 ~~~~~~el~~~v~~~~VfAr~sPe~K~~iV~~Lq~~G~vVamtGDGvNDaPALk~ADVGIAmg-~gtdvAkeaADiVLld 679 (903)
T PRK15122 601 EAMDDAALAREVEERTVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPALRDADVGISVD-SGADIAKESADIILLE 679 (903)
T ss_pred hhCCHHHHHHHhhhCCEEEEeCHHHHHHHHHHHHhCCCEEEEECCCchhHHHHHhCCEEEEeC-cccHHHHHhcCEEEec
Confidence 999999999999999999999999999999999999999999999999999999999999999 8999999999999999
Q ss_pred CChhHHHHHHHHhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHhhhhhHHHHHHhccCCCCcccc
Q 001616 803 DDFTSVATVLRWGRCVYTNIQKFIQFQLTVNVAALVINFIAAVSAGEVPLTAVQLLWVNLIMDTLGALALATDRPTDELM 882 (1044)
Q Consensus 803 d~f~~I~~~i~~GR~~~~ni~k~i~f~l~~nv~~~~~~~~~~~~~~~~pl~~~qlL~~nli~d~l~alala~e~p~~~lm 882 (1044)
|||++|+.++++||++|+||+|+++|+++.|+..++..+++.++..+.||+++|+||+||++|+ |+++|++|||++++|
T Consensus 680 d~f~~Iv~ai~~gR~i~~nI~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~~nli~D~-~~lal~~d~~~~~~m 758 (903)
T PRK15122 680 KSLMVLEEGVIKGRETFGNIIKYLNMTASSNFGNVFSVLVASAFIPFLPMLAIHLLLQNLMYDI-SQLSLPWDKMDKEFL 758 (903)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHH-HHHhhcCCCCCHhhc
Confidence 9999999999999999999999999999999998888888777777799999999999999996 899999999999999
Q ss_pred cCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCc--ccccchhhhHHHHHHHHHHhhhcccccccccc
Q 001616 883 QRPPVGRTEPLITNIMWRNLLSQALYQITILLILQFKGESIFNVSP--EVNDTLIFNTFVFCQVFNEFNARKLEKRNVFK 960 (1044)
Q Consensus 883 ~~~P~~~~~~li~~~~~~~i~~~~~~q~~v~~~l~~~~~~~~~~~~--~~~~t~~f~~~v~~q~fn~~n~r~~~~~~~f~ 960 (1044)
|||+.++++++++.|+...+..+++.+..++++++. .. .+... ...+|..|.+++++|+||.+|+|+.+ .
T Consensus 759 -~~P~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~t~~f~~l~~~q~~~~~~~R~~~-~---- 830 (903)
T PRK15122 759 -RKPRKWDAKNIGRFMLWIGPTSSIFDITTFALMWFV-FA-ANSVEMQALFQSGWFIEGLLSQTLVVHMLRTQK-I---- 830 (903)
T ss_pred -CCCCCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHH-hc-cCcHhhhhhhHHHHHHHHHHHHHHHHHhhCcCC-C----
Confidence 999999999999988875544444444333332221 10 11101 12357789999999999999999742 2
Q ss_pred cccccHHHHHHHHHHHHHHHHH--HHH--hhHhhccCCCChHHHHHHHHHHHHHHHHHHHhhhc
Q 001616 961 GIHKNKLFLGIIGITVVLQVVM--VEF--LKKFADTERLNWQQWLACIAMAAFTWPIGWAVKFI 1020 (1044)
Q Consensus 961 ~~~~n~~f~~~i~~~~~~qv~~--v~~--~~~~f~~~~l~~~~w~~~i~~~~~~~~~~~~~k~i 1020 (1044)
++|+|++.+..+++++++|+++ +++ ++.+|+++||++.+|+++++++++.+++.++.|.+
T Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~e~~k~~ 894 (903)
T PRK15122 831 PFIQSTAALPVLLTTGLIMAIGIYIPFSPLGAMVGLEPLPWSYFPWLAATLLGYCLVAQGMKRF 894 (903)
T ss_pred CcCcchHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445666666666777777654 455 78999999999999999999999989888888854
No 10
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=100.00 E-value=4.2e-135 Score=1271.82 Aligned_cols=817 Identities=24% Similarity=0.361 Sum_probs=691.7
Q ss_pred CHHHHHHHhCCCcCCCCCcCHHHHHHHHhhcCCCcCCCCCCCcHHHHHHHHhhhhHHHHHHHHHHHHHhhccccCCCCcc
Q 001616 113 GVEGVANALGTNPEYGINGNDEDVSRRSQLFGANTYHKPPPKGLLHFVLEAFKDTTILILLVCAALSLGFGIKEHGAEEG 192 (1044)
Q Consensus 113 gv~~l~~~l~t~~~~GL~~~~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~illv~a~lsl~~gi~~~g~~~~ 192 (1044)
.++++.+.|+++. +||+++| +++|+++||+|++++++++++|+.++++|+++++++|++++++|++.+ .
T Consensus 19 ~~~~~~~~l~~~~-~GLs~~e--v~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~p~~~iL~~~a~ls~~~~--------~ 87 (867)
T TIGR01524 19 GKETLLRKLGVHE-TGLTNVE--VTERLAEFGPNQTVEEKKVPNLRLLIRAFNNPFIYILAMLMGVSYLTD--------D 87 (867)
T ss_pred CHHHHHHHhCCCC-CCCCHHH--HHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHh--------h
Confidence 6889999999985 7999866 999999999999999988899999999999999999999999999886 6
Q ss_pred ccchhHHHHHHHHHHHHhHHHHHHHHHHHHHhhcccCCceEEEEe------CCeEEEEeecccccCcEEEeCCCCeeecc
Q 001616 193 WYEGGSIFVAVFLVIVVSAFSNFRQARQFDKLSKISNNIKVEVVR------EARRLQISIFDLVVGDIVFLKIGDQIPAD 266 (1044)
Q Consensus 193 ~~d~~~i~~~v~lv~~v~a~~~~~~~~~~~~l~~~~~~~~v~ViR------~G~~~~I~~~dLvvGDIV~l~~Gd~VPAD 266 (1044)
|++++.|++.+++..+++.+++++.++..++|.+.. +.+++|+| ||++++|+++||||||+|.|++||+||||
T Consensus 88 ~~~~~iI~~iv~~~~~i~~~~e~~a~ka~~~L~~l~-~~~~~V~R~~~~~~dg~~~~I~~~eLv~GDiV~l~~Gd~VPaD 166 (867)
T TIGR01524 88 LEATVIIALMVLASGLLGFIQESRAERAAYALKNMV-KNTATVLRVINENGNGSMDEVPIDALVPGDLIELAAGDIIPAD 166 (867)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhhc-cCeeEEEEecccCCCCeEEEEEhhcCCCCCEEEECCCCEEccc
Confidence 899999999999999999999999999999998764 46899999 99999999999999999999999999999
Q ss_pred EEEEecCceeeecCCCCCCCCceeecCCC-----------CceeeecceEeeCceEEEEEEecccchhHHHHhhcCCCCC
Q 001616 267 GLFLDGHSLQVDESSMTGESDHVEVDSTN-----------NPFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSSISSDSN 335 (1044)
Q Consensus 267 gill~g~~l~VDES~LTGEs~pv~k~~~~-----------~~~l~sGt~v~~G~~~~~V~~vG~~T~~gki~~~~~~~~~ 335 (1044)
|++++|+++.||||+|||||.|+.|.+.. ++++|+||.|.+|.++++|++||.+|+.||+.+.+.+ ..
T Consensus 167 g~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~v~~G~~~~~V~~tG~~T~~gki~~~v~~-~~ 245 (867)
T TIGR01524 167 ARVISARDLFINQSALTGESLPVEKFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWFGSLAIAATE-RR 245 (867)
T ss_pred EEEEecCceEEEcccccCCCCcccccCCccccccccccccccceecCCeEEEeEEEEEEEEEcCccHHHHHHHHhhC-CC
Confidence 99999998999999999999999997532 4689999999999999999999999999999999877 67
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccccCCCCCCcchhHHHHHHHHHHHHHHHHHHhcc
Q 001616 336 ERTPLQARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAAAVTIVVVAIPE 415 (1044)
Q Consensus 336 ~~tplq~~l~~la~~i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~ilvvavP~ 415 (1044)
+++|+|++++++++++..+++++++++++++. +.+. .+...+..++++++++|||
T Consensus 246 ~~t~lq~~~~~i~~~~~~~~~~~~~i~~~~~~---~~~~----------------------~~~~~~~~al~l~v~~iP~ 300 (867)
T TIGR01524 246 GQTAFDKGVKSVSKLLIRFMLVMVPVVLMING---LMKG----------------------DWLEAFLFALAVAVGLTPE 300 (867)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHheehHH---HhcC----------------------CHHHHHHHHHHHHHHhCcc
Confidence 78999999999999999888877776665532 1110 3456788899999999999
Q ss_pred hhHHHHHHHHHHHHHhhccccceeccchhhhcccCeeEEeeCcccccccCceEEEEEEeccccccccccccCChHHHHHH
Q 001616 416 GLPLAVTLTLAYSMKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKFWLGQESIVQETYCKIASSIRDLF 495 (1044)
Q Consensus 416 gLplavtl~la~~~~~m~k~~~lvr~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~l 495 (1044)
|||++++++++.++++|+|+|++||+++++|+||++|+||||||||||+|+|+|++++.... . . ..+++
T Consensus 301 ~Lp~~vt~~la~g~~~mak~~ilvk~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~~~~~-~--------~--~~~~l 369 (867)
T TIGR01524 301 MLPMIVSSNLAKGAINMSKKKVIVKELSAIQNFGAMDILCTDKTGTLTQDKIELEKHIDSSG-E--------T--SERVL 369 (867)
T ss_pred hHHHHHHHHHHHHHHHHHhCCcEEccchhhhhccCccEEEecCCCccccCeEEEEEEecCCC-C--------C--HHHHH
Confidence 99999999999999999999999999999999999999999999999999999999753211 0 0 11222
Q ss_pred HHHHhhcCCccccccCCCCCcceecCChhHHHHHHHHHHHcCCChHHhhhcccEEEEecCCCCCceEEEEEEecCCCeEE
Q 001616 496 HQGVGLNTTGSVSKLKPGSSVAEFSGSPTEKAVLSWAVLEMGMEMDKVKQKYSILHVETFNSEKKRSGVLIRRKADNTTH 575 (1044)
Q Consensus 496 ~~~i~~n~~~~~~~~~~~~~~~~~~gsp~e~All~~a~~~~g~~~~~~~~~~~il~~~pF~s~rkrmsvvv~~~~~~~~~ 575 (1044)
.. .++|+.. . ...+||+|+|+++++. +. .....+..++.++.+||+|++|+|+++++..++ .++
T Consensus 370 ~~-a~l~~~~--~---------~~~~~p~~~Al~~~~~-~~--~~~~~~~~~~~~~~~pF~s~~k~ms~~v~~~~~-~~~ 433 (867)
T TIGR01524 370 KM-AWLNSYF--Q---------TGWKNVLDHAVLAKLD-ES--AARQTASRWKKVDEIPFDFDRRRLSVVVENRAE-VTR 433 (867)
T ss_pred HH-HHHhCCC--C---------CCCCChHHHHHHHHHH-hh--chhhHhhcCceEEEeccCCCcCEEEEEEEcCCc-eEE
Confidence 22 2333321 0 1246999999999986 32 223345578889999999999999999876544 378
Q ss_pred EEecCcHHHHHHhcccccccCCeeecCChhhHHHHHHHHHHHHhcccceeeeeeeecCchhhcccchHHHhhhhcccCeE
Q 001616 576 IHWKGAAEIILAMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAYNNDVKARQRLKEEGLT 655 (1044)
Q Consensus 576 ~~~KGA~e~Il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~~A~k~l~~~~~~~~~~~~~~~~~~e~~l~ 655 (1044)
+++|||||.|+++|+++. .+|...+++++.++++++.+++|+++|+|++++|||+++.++.. ..+..|++|+
T Consensus 434 ~~~KGa~e~il~~c~~~~-~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~~~~~~~~~~-------~~~~~e~~l~ 505 (867)
T TIGR01524 434 LICKGAVEEMLTVCTHKR-FGGAVVTLSESEKSELQDMTAEMNRQGIRVIAVATKTLKVGEAD-------FTKTDEEQLI 505 (867)
T ss_pred EEEeCcHHHHHHhchhhh-cCCceecCCHHHHHHHHHHHHHHHhcCCEEEEEEEeccCccccc-------ccccccCCcE
Confidence 999999999999999774 46777899999899999999999999999999999998642211 0112367999
Q ss_pred EEEEecccCCCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCcccccccccceeecchhhhcCCHHHHHHHhc
Q 001616 656 LLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVD 735 (1044)
Q Consensus 656 llG~vgi~D~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~ 735 (1044)
|+|+++++||+|||++++|++|+++||+|+|+||||..||++||+++||.. ..+++|.+++.++++|+.+.++
T Consensus 506 ~lGli~l~Dp~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~-------~~v~~g~~l~~~~~~el~~~~~ 578 (867)
T TIGR01524 506 IEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDA-------NDFLLGADIEELSDEELARELR 578 (867)
T ss_pred EEEEEEeeCCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC-------CCeeecHhhhhCCHHHHHHHhh
Confidence 999999999999999999999999999999999999999999999999964 2489999999999999999999
Q ss_pred cccEEeecChhhHHHHHHHHHhcCCEEEEEcCCcCCHHHHhhCCcceeeCCCchHHHhhccCEEEccCChhHHHHHHHHh
Q 001616 736 KIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLRWG 815 (1044)
Q Consensus 736 ~~~V~ar~sP~~K~~lV~~lq~~g~vVa~~GDG~NDapaLk~AdVGiamg~~gt~vAk~aaDivl~dd~f~~I~~~i~~G 815 (1044)
++.||||++|+||.++|+.||++|++|||||||+||+||||+|||||||| +|+++||++||+||+||||++|+.++++|
T Consensus 579 ~~~vfAr~~Pe~K~~iV~~lq~~G~vVam~GDGvNDapALk~AdVGIAmg-~gtdvAk~aADiVLldd~~~~I~~ai~~g 657 (867)
T TIGR01524 579 KYHIFARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVD-TAADIAKEASDIILLEKSLMVLEEGVIEG 657 (867)
T ss_pred hCeEEEECCHHHHHHHHHHHHhCCCEEEEECCCcccHHHHHhCCEEEEeC-CccHHHHHhCCEEEecCChHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999 89999999999999999999999999999
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHhhhhhHHHHHHhccCCCCcccccCCCCCCCCCccc
Q 001616 816 RCVYTNIQKFIQFQLTVNVAALVINFIAAVSAGEVPLTAVQLLWVNLIMDTLGALALATDRPTDELMQRPPVGRTEPLIT 895 (1044)
Q Consensus 816 R~~~~ni~k~i~f~l~~nv~~~~~~~~~~~~~~~~pl~~~qlL~~nli~d~l~alala~e~p~~~lm~~~P~~~~~~li~ 895 (1044)
|++|+||+|+++|+++.|+..++..+++.++..+.||+++|+||+|+++| +|+++|++|||++++|++||+ ++++.+.
T Consensus 658 R~i~~ni~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~inl~~d-~~~~al~~~~~~~~~m~~p~~-~~~~~~~ 735 (867)
T TIGR01524 658 RNTFGNILKYLKMTASSNFGNVFSVLVASAFIPFLPMLSLHLLIQNLLYD-FSQLTLPWDKMDREFLKKPHQ-WEQKGMG 735 (867)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH-HHHHhhcCCCCChHhhCCCCC-CChhhHH
Confidence 99999999999999999999988888887777679999999999999999 799999999999999987776 6665544
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccccCC-CcccccchhhhHHHHHHHHHHhhhcccccccccccccccHHHHHHHHH
Q 001616 896 NIMWRNLLSQALYQITILLILQFKGESIFNV-SPEVNDTLIFNTFVFCQVFNEFNARKLEKRNVFKGIHKNKLFLGIIGI 974 (1044)
Q Consensus 896 ~~~~~~i~~~~~~q~~v~~~l~~~~~~~~~~-~~~~~~t~~f~~~v~~q~fn~~n~r~~~~~~~f~~~~~n~~f~~~i~~ 974 (1044)
+.++..-+..++..++.++++++.+.. .+. .....+|..|.+++++|++|.+|+|..+. ++|+|++.+.++++
T Consensus 736 ~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~t~~f~~~~~~~~~~~~~~R~~~~-----~~~~n~~~~~~~~~ 809 (867)
T TIGR01524 736 RFMLCIGPVSSIFDIATFLLMWFVFSA-NTVEEQALFQSGWFVVGLLSQTLVVHMIRTEKI-----PFIQSRAAAPVMIA 809 (867)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcc-cchhhhhHHHHHHHHHHHHHHHHHHHhhCcCCC-----CcCcchHHHHHHHH
Confidence 444433222222222222222222110 000 01123678899999999999999997422 45578888888888
Q ss_pred HHHHHHHHH--HH--hhHhhccCCC--ChHHHHHHHHHHHHHHHHHHHhhhc
Q 001616 975 TVVLQVVMV--EF--LKKFADTERL--NWQQWLACIAMAAFTWPIGWAVKFI 1020 (1044)
Q Consensus 975 ~~~~qv~~v--~~--~~~~f~~~~l--~~~~w~~~i~~~~~~~~~~~~~k~i 1020 (1044)
++++|++++ ++ ++.+|+++|+ ++..|++++.++++ ++.++.|.+
T Consensus 810 ~~~~~~~~~~~p~~~~~~~f~~~~l~~~~~~~~~~~~~~~~--~~~e~~k~~ 859 (867)
T TIGR01524 810 TLLVMALGIIIPFSPLGHSIGLVSLPLSYFPWLIAILVGYM--ATMQLVKTF 859 (867)
T ss_pred HHHHHHHHHHhchhhhhhhhccccCCccHHHHHHHHHHHHH--HHHHHHHHH
Confidence 888887665 34 3789999977 67788888887765 556777754
No 11
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=100.00 E-value=3.7e-135 Score=1270.93 Aligned_cols=814 Identities=25% Similarity=0.379 Sum_probs=689.0
Q ss_pred CHHHHHHHhCCCcCCCCCcCHHHHHHHHhhcCCCcCCCCCCCcHHHHHHHHhhhhHHHHHHHHHHHHHhhccccCCCCcc
Q 001616 113 GVEGVANALGTNPEYGINGNDEDVSRRSQLFGANTYHKPPPKGLLHFVLEAFKDTTILILLVCAALSLGFGIKEHGAEEG 192 (1044)
Q Consensus 113 gv~~l~~~l~t~~~~GL~~~~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~illv~a~lsl~~gi~~~g~~~~ 192 (1044)
..+.+.+.|+++. +||+++| +++|+++||+|+++.++++++|+.++++|++|++++|++++++|++.| .
T Consensus 53 ~~~~v~~~l~~~~-~GLs~~e--a~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~p~~~lL~~aa~ls~~~~--------~ 121 (902)
T PRK10517 53 PEEELWKTFDTHP-EGLNEAE--VESAREQHGENELPAQKPLPWWVHLWVCYRNPFNILLTILGAISYATE--------D 121 (902)
T ss_pred CHHHHHHHhCCCC-CCCCHHH--HHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHc--------c
Confidence 5778888899986 6999866 999999999999999999999999999999999999999999999886 6
Q ss_pred ccchhHHHHHHHHHHHHhHHHHHHHHHHHHHhhcccCCceEEEEeC------CeEEEEeecccccCcEEEeCCCCeeecc
Q 001616 193 WYEGGSIFVAVFLVIVVSAFSNFRQARQFDKLSKISNNIKVEVVRE------ARRLQISIFDLVVGDIVFLKIGDQIPAD 266 (1044)
Q Consensus 193 ~~d~~~i~~~v~lv~~v~a~~~~~~~~~~~~l~~~~~~~~v~ViR~------G~~~~I~~~dLvvGDIV~l~~Gd~VPAD 266 (1044)
|++++.|++.+++..+++.+++++.++..++|.+.. +.+++|+|| |++++|+++||||||+|.|++||+||||
T Consensus 122 ~~~a~~I~~iv~i~~~i~~~qe~ra~~~~~~L~~l~-~~~a~ViR~g~~~~~g~~~~I~~~eLvpGDiV~l~~Gd~IPaD 200 (902)
T PRK10517 122 LFAAGVIALMVAISTLLNFIQEARSTKAADALKAMV-SNTATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPAD 200 (902)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEECCccCCCCeEEEEEHHhCCCCCEEEECCCCEEeee
Confidence 899999999999999999999999999999998764 468999999 7899999999999999999999999999
Q ss_pred EEEEecCceeeecCCCCCCCCceeecCCC-----------CceeeecceEeeCceEEEEEEecccchhHHHHhhcCCCCC
Q 001616 267 GLFLDGHSLQVDESSMTGESDHVEVDSTN-----------NPFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSSISSDSN 335 (1044)
Q Consensus 267 gill~g~~l~VDES~LTGEs~pv~k~~~~-----------~~~l~sGt~v~~G~~~~~V~~vG~~T~~gki~~~~~~~~~ 335 (1044)
|++++|+++.||||+|||||.|+.|.+.. ++++|+||.|.+|.++++|++||.+|+.||+.+.+.+...
T Consensus 201 g~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~vV~atG~~T~~GkI~~~v~~~~~ 280 (902)
T PRK10517 201 LRILQARDLFVAQASLTGESLPVEKFATTRQPEHSNPLECDTLCFMGTNVVSGTAQAVVIATGANTWFGQLAGRVSEQDS 280 (902)
T ss_pred EEEEEcCceEEEecCcCCCCCceecccccccccccCccccccceeeCceEeeeeEEEEEEEeccccHHHHHHHHhhccCC
Confidence 99999998999999999999999997532 3589999999999999999999999999999999988888
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccccCCCCCCcchhHHHHHHHHHHHHHHHHHHhcc
Q 001616 336 ERTPLQARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAAAVTIVVVAIPE 415 (1044)
Q Consensus 336 ~~tplq~~l~~la~~i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~ilvvavP~ 415 (1044)
+++|+|+.+++++.++..++++++.+++++.. +.+. .+...+..++++++++|||
T Consensus 281 ~~t~lq~~~~~i~~~l~~~~~~~~~~v~~i~~---~~~~----------------------~~~~~l~~alsv~V~~~Pe 335 (902)
T PRK10517 281 EPNAFQQGISRVSWLLIRFMLVMAPVVLLING---YTKG----------------------DWWEAALFALSVAVGLTPE 335 (902)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHhhhHHH---HhcC----------------------CHHHHHHHHHHHHHHHccc
Confidence 89999999999999988888777766655432 1110 3456778899999999999
Q ss_pred hhHHHHHHHHHHHHHhhccccceeccchhhhcccCeeEEeeCcccccccCceEEEEEEeccccccccccccCChHHHHHH
Q 001616 416 GLPLAVTLTLAYSMKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKFWLGQESIVQETYCKIASSIRDLF 495 (1044)
Q Consensus 416 gLplavtl~la~~~~~m~k~~~lvr~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~l 495 (1044)
|||++++++++.++++|+|+|++||+++++|+||++|+||||||||||+|+|+|.+++.... .+ ..+++
T Consensus 336 ~LP~~vt~~la~g~~~mak~~ilVk~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~~~~~---------~~--~~~ll 404 (902)
T PRK10517 336 MLPMIVTSTLARGAVKLSKQKVIVKRLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTDISG---------KT--SERVL 404 (902)
T ss_pred HHHHHHHHHHHHHHHHHHhCCcEEecchhhhhccCCCEEEecCCCccccceEEEEEEecCCC---------CC--HHHHH
Confidence 99999999999999999999999999999999999999999999999999999998642110 00 11222
Q ss_pred HHHHhhcCCccccccCCCCCcceecCChhHHHHHHHHHHHcCCChHHhhhcccEEEEecCCCCCceEEEEEEecCCCeEE
Q 001616 496 HQGVGLNTTGSVSKLKPGSSVAEFSGSPTEKAVLSWAVLEMGMEMDKVKQKYSILHVETFNSEKKRSGVLIRRKADNTTH 575 (1044)
Q Consensus 496 ~~~i~~n~~~~~~~~~~~~~~~~~~gsp~e~All~~a~~~~g~~~~~~~~~~~il~~~pF~s~rkrmsvvv~~~~~~~~~ 575 (1044)
. ..++|+.. . ...|||+|.|+++++. ..+ .......++.++.+||+|++|||+++++..++. ++
T Consensus 405 ~-~a~l~~~~--~---------~~~~~p~d~All~~a~-~~~--~~~~~~~~~~~~~~pFds~~k~msvvv~~~~~~-~~ 468 (902)
T PRK10517 405 H-SAWLNSHY--Q---------TGLKNLLDTAVLEGVD-EES--ARSLASRWQKIDEIPFDFERRRMSVVVAENTEH-HQ 468 (902)
T ss_pred H-HHHhcCCc--C---------CCCCCHHHHHHHHHHH-hcc--hhhhhhcCceEEEeeeCCCcceEEEEEEECCCe-EE
Confidence 2 23334321 1 1158999999999886 322 123445688899999999999999999865554 67
Q ss_pred EEecCcHHHHHHhcccccccCCeeecCChhhHHHHHHHHHHHHhcccceeeeeeeecCchhhcccchHHHhhhhcccCeE
Q 001616 576 IHWKGAAEIILAMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAYNNDVKARQRLKEEGLT 655 (1044)
Q Consensus 576 ~~~KGA~e~Il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~~A~k~l~~~~~~~~~~~~~~~~~~e~~l~ 655 (1044)
+++|||||.|+++|+++.. +|...+++++.++++++.+++++++|+|++++|||+++.++.. .....|+|++
T Consensus 469 ~~~KGa~e~il~~c~~~~~-~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~-------~~~~~e~~l~ 540 (902)
T PRK10517 469 LICKGALEEILNVCSQVRH-NGEIVPLDDIMLRRIKRVTDTLNRQGLRVVAVATKYLPAREGD-------YQRADESDLI 540 (902)
T ss_pred EEEeCchHHHHHhchhhhc-CCCeecCCHHHHHHHHHHHHHHHhcCCEEEEEEEecCCccccc-------cccccccCce
Confidence 9999999999999998754 6777899999999999999999999999999999988642211 0112367999
Q ss_pred EEEEecccCCCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCcccccccccceeecchhhhcCCHHHHHHHhc
Q 001616 656 LLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVD 735 (1044)
Q Consensus 656 llG~vgi~D~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~ 735 (1044)
|+|+++|+||+||+++++|++|+++||+|+|+||||..||.+||++|||.. ..+++|.+++.++++|+.+.++
T Consensus 541 ~lGli~~~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~-------~~v~~G~el~~l~~~el~~~~~ 613 (902)
T PRK10517 541 LEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDA-------GEVLIGSDIETLSDDELANLAE 613 (902)
T ss_pred eeehHhhhCcchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCc-------cCceeHHHHHhCCHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999953 3589999999999999999999
Q ss_pred cccEEeecChhhHHHHHHHHHhcCCEEEEEcCCcCCHHHHhhCCcceeeCCCchHHHhhccCEEEccCChhHHHHHHHHh
Q 001616 736 KIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLRWG 815 (1044)
Q Consensus 736 ~~~V~ar~sP~~K~~lV~~lq~~g~vVa~~GDG~NDapaLk~AdVGiamg~~gt~vAk~aaDivl~dd~f~~I~~~i~~G 815 (1044)
++.||||++|+||.++|+.||++|++|||||||+||+||||+|||||||| +|||+||++||+||+||||++|++++++|
T Consensus 614 ~~~VfAr~sPe~K~~IV~~Lq~~G~vVam~GDGvNDaPALk~ADVGIAmg-~gtdvAkeaADiVLldd~~~~I~~ai~~g 692 (902)
T PRK10517 614 RTTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVD-GAVDIAREAADIILLEKSLMVLEEGVIEG 692 (902)
T ss_pred hCcEEEEcCHHHHHHHHHHHHHCCCEEEEECCCcchHHHHHhCCEEEEeC-CcCHHHHHhCCEEEecCChHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999 99999999999999999999999999999
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHhhhhhHHHHHHhccCCCCcccccCCCCCCCCCccc
Q 001616 816 RCVYTNIQKFIQFQLTVNVAALVINFIAAVSAGEVPLTAVQLLWVNLIMDTLGALALATDRPTDELMQRPPVGRTEPLIT 895 (1044)
Q Consensus 816 R~~~~ni~k~i~f~l~~nv~~~~~~~~~~~~~~~~pl~~~qlL~~nli~d~l~alala~e~p~~~lm~~~P~~~~~~li~ 895 (1044)
|++|+||+|+++|+++.|+..++..+++.++..+.||+|+|+||+|+++| +++++|++|||++++|++||+ ++...+.
T Consensus 693 R~i~~nI~k~i~~~ls~n~~~v~~~~~~~~~~~~~pl~~~qiL~inl~~D-~~~~al~~d~~~~~~m~~p~r-~~~~~~~ 770 (902)
T PRK10517 693 RRTFANMLKYIKMTASSNFGNVFSVLVASAFLPFLPMLPLHLLIQNLLYD-VSQVAIPFDNVDDEQIQKPQR-WNPADLG 770 (902)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHH-HhHHhhcCCCCChhhhcCCCC-CCHHHHH
Confidence 99999999999999999999988888887776668999999999999999 689999999999999999997 2333344
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccccCCCc----ccccchhhhHHHHHHHHHHhhhcccccccccccccccHHHHHH
Q 001616 896 NIMWRNLLSQALYQITILLILQFKGESIFNVSP----EVNDTLIFNTFVFCQVFNEFNARKLEKRNVFKGIHKNKLFLGI 971 (1044)
Q Consensus 896 ~~~~~~i~~~~~~q~~v~~~l~~~~~~~~~~~~----~~~~t~~f~~~v~~q~fn~~n~r~~~~~~~f~~~~~n~~f~~~ 971 (1044)
+.|+...+..+++.++.++++++. ++... ...+|..|.+++++|+++.+|+|+... ++|+|++.+..
T Consensus 771 ~~~~~~g~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~F~~~~~~q~~~~~~~R~~~~-----~~~~~~~~~~~ 841 (902)
T PRK10517 771 RFMVFFGPISSIFDILTFCLMWWV----FHANTPETQTLFQSGWFVVGLLSQTLIVHMIRTRRI-----PFIQSRAAWPL 841 (902)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH----ccccchhhHhHHHHHHHHHHHHHHHHHHHhhccCCC-----CcccchHHHHH
Confidence 444433333333333322222221 12111 122344599999999999999998422 45678888888
Q ss_pred HHHHHHHHHHH--HH--HhhHhhccCCCC--hHHHHHHHHHHHHHHHHHHHhhh
Q 001616 972 IGITVVLQVVM--VE--FLKKFADTERLN--WQQWLACIAMAAFTWPIGWAVKF 1019 (1044)
Q Consensus 972 i~~~~~~qv~~--v~--~~~~~f~~~~l~--~~~w~~~i~~~~~~~~~~~~~k~ 1019 (1044)
++++++++++. ++ +++.+|++.||+ +..|++++++++. ++.++.|.
T Consensus 842 ~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~e~~K~ 893 (902)
T PRK10517 842 MIMTLIVMAVGIALPFSPLASYLQLQALPLSYFPWLVAILAGYM--TLTQLVKG 893 (902)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhhCCcCCChhHHHHHHHHHHHHH--HHHHHHHH
Confidence 88887777654 44 568899999999 7889888877766 45666664
No 12
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=100.00 E-value=1.4e-122 Score=1145.12 Aligned_cols=744 Identities=23% Similarity=0.359 Sum_probs=630.0
Q ss_pred CCCcCHHHHHHHHhhcCCCcCCCCCCCcHHHHHHHHhhhhHHHHHHHHHHHHHhhccccCCCCccccchhHHHHHHHHHH
Q 001616 128 GINGNDEDVSRRSQLFGANTYHKPPPKGLLHFVLEAFKDTTILILLVCAALSLGFGIKEHGAEEGWYEGGSIFVAVFLVI 207 (1044)
Q Consensus 128 GL~~~~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~illv~a~lsl~~gi~~~g~~~~~~d~~~i~~~v~lv~ 207 (1044)
||+++| +++|+++||+|+++++ ++++|+.++++|++|++++|++++++++++| .|+|++.|++.+++..
T Consensus 1 GLs~~e--a~~r~~~~G~N~~~~~-~~~~~~~~~~~~~~~~~~lL~~aa~~s~~~~--------~~~~~~~i~~~~~i~~ 69 (755)
T TIGR01647 1 GLTSAE--AKKRLAKYGPNELPEK-KVSPLLKFLGFFWNPLSWVMEAAAIIAIALE--------NWVDFVIILGLLLLNA 69 (755)
T ss_pred CcCHHH--HHHHHHhcCCCCCCCC-CCCHHHHHHHHHhchHHHHHHHHHHHHHhhc--------chhhhhhhhhhhHHHH
Confidence 888866 9999999999999975 4577899999999999999999999999987 5999999999999999
Q ss_pred HHhHHHHHHHHHHHHHhhcccCCceEEEEeCCeEEEEeecccccCcEEEeCCCCeeeccEEEEecCceeeecCCCCCCCC
Q 001616 208 VVSAFSNFRQARQFDKLSKISNNIKVEVVREARRLQISIFDLVVGDIVFLKIGDQIPADGLFLDGHSLQVDESSMTGESD 287 (1044)
Q Consensus 208 ~v~a~~~~~~~~~~~~l~~~~~~~~v~ViR~G~~~~I~~~dLvvGDIV~l~~Gd~VPADgill~g~~l~VDES~LTGEs~ 287 (1044)
.++.+++|+.++..++|.+. .+.+++|+|||++++|+++||||||+|.|++||+|||||++++|+++.||||+|||||.
T Consensus 70 ~i~~~qe~~a~~~~~~L~~~-~~~~~~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi~g~~~~VDeS~LTGES~ 148 (755)
T TIGR01647 70 TIGFIEENKAGNAVEALKQS-LAPKARVLRDGKWQEIPASELVPGDVVRLKIGDIVPADCRLFEGDYIQVDQAALTGESL 148 (755)
T ss_pred HHHHHHHHHHHHHHHHHHhh-CCCeEEEEECCEEEEEEhhhCcCCCEEEECCCCEEeceEEEEecCceEEEcccccCCcc
Confidence 99999999999999999755 46789999999999999999999999999999999999999999988999999999999
Q ss_pred ceeecCCCCceeeecceEeeCceEEEEEEecccchhHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001616 288 HVEVDSTNNPFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSSISSDSNERTPLQARLDKLTSTIGKVGLAVAFLVLVVLL 367 (1044)
Q Consensus 288 pv~k~~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~gki~~~~~~~~~~~tplq~~l~~la~~i~~~~l~~a~l~~iv~~ 367 (1044)
|+.|. .++.+|+||.|.+|.++++|++||.+|++|++.+.+.+.+.+++|+|+.+++++.++..+.+++++++++++.
T Consensus 149 PV~K~--~~~~v~aGT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~~lq~~~~~i~~~~~~~~~~~~~i~~~~~~ 226 (755)
T TIGR01647 149 PVTKK--TGDIAYSGSTVKQGEAEAVVTATGMNTFFGKAAALVQSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLF 226 (755)
T ss_pred ceEec--cCCeeeccCEEEccEEEEEEEEcCCccHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99998 5789999999999999999999999999999999998888888999999999999998888777776666542
Q ss_pred HHHHhcCCCCCCCccccCCCCCCcchhHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhhccccceeccchhhhc
Q 001616 368 ARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMTDQAMVRKLPACET 447 (1044)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~ilvvavP~gLplavtl~la~~~~~m~k~~~lvr~~~a~E~ 447 (1044)
.. .+. .+...+..++++++++|||+||+++++++++++++|+|+|++||+++++|+
T Consensus 227 ~~--~~~----------------------~~~~~~~~~i~vlv~a~P~~Lp~~~~~~la~g~~r~ak~gilvk~l~alE~ 282 (755)
T TIGR01647 227 FG--RGE----------------------SFREGLQFALVLLVGGIPIAMPAVLSVTMAVGAAELAKKKAIVTRLTAIEE 282 (755)
T ss_pred HH--cCC----------------------CHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHhCCeEEcccHHHHh
Confidence 21 110 455678889999999999999999999999999999999999999999999
Q ss_pred ccCeeEEeeCcccccccCceEEEEEEeccccccccccccCChHHHHHHHHHHhhcCCccccccCCCCCcceecCChhHHH
Q 001616 448 MGSATVICTDKTGTLTLNQMKVTKFWLGQESIVQETYCKIASSIRDLFHQGVGLNTTGSVSKLKPGSSVAEFSGSPTEKA 527 (1044)
Q Consensus 448 Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~n~~~~~~~~~~~~~~~~~~gsp~e~A 527 (1044)
||++|+||||||||||+|+|+|.+++..+..+. + .+++..+. +|+. ...+||+|+|
T Consensus 283 lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~--------~--~~~l~~a~-~~~~-------------~~~~~pi~~A 338 (755)
T TIGR01647 283 LAGMDILCSDKTGTLTLNKLSIDEILPFFNGFD--------K--DDVLLYAA-LASR-------------EEDQDAIDTA 338 (755)
T ss_pred ccCCcEEEecCCCccccCceEEEEEEecCCCCC--------H--HHHHHHHH-HhCC-------------CCCCChHHHH
Confidence 999999999999999999999999986542111 1 12333333 2221 1257999999
Q ss_pred HHHHHHHHcCCChHHhhhcccEEEEecCCCCCceEEEEEEecCCCeEEEEecCcHHHHHHhcccccccCCeeecCChhhH
Q 001616 528 VLSWAVLEMGMEMDKVKQKYSILHVETFNSEKKRSGVLIRRKADNTTHIHWKGAAEIILAMCSHYYESNGVIKSMDGNGR 607 (1044)
Q Consensus 528 ll~~a~~~~g~~~~~~~~~~~il~~~pF~s~rkrmsvvv~~~~~~~~~~~~KGA~e~Il~~c~~~~~~~g~~~~l~~~~~ 607 (1044)
+++++. +.+ ..+..+++++.+||+|.+|+|+++++.+++++.++++|||||.|+++|++. ++.+
T Consensus 339 i~~~~~-~~~----~~~~~~~~~~~~pf~~~~k~~~~~v~~~~~g~~~~~~kGa~e~il~~c~~~-----------~~~~ 402 (755)
T TIGR01647 339 VLGSAK-DLK----EARDGYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVILDLCDNK-----------KEIE 402 (755)
T ss_pred HHHHHH-HhH----HHHhcCceEEEeccCCCCCeEEEEEEeCCCceEEEEEeCChHHHHHhcCCc-----------HHHH
Confidence 999886 322 334568889999999999999999886643446688999999999999742 3456
Q ss_pred HHHHHHHHHHHhcccceeeeeeeecCchhhcccchHHHhhhhcccCeEEEEEecccCCCchhHHHHHHHHHhcCCEEEEE
Q 001616 608 SQMENIIHGMAASSLRCIAFAYKQVSEEETAYNNDVKARQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMI 687 (1044)
Q Consensus 608 ~~~~~~i~~~a~~glR~l~~A~k~l~~~~~~~~~~~~~~~~~~e~~l~llG~vgi~D~lR~~v~~aI~~l~~aGI~v~ml 687 (1044)
+++++.+++++++|+|++++|||+. |++|+|+|+++++||+|||++++|+.||++||+|+|+
T Consensus 403 ~~~~~~~~~~~~~G~rvl~vA~~~~------------------e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~mi 464 (755)
T TIGR01647 403 EKVEEKVDELASRGYRALGVARTDE------------------EGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKMV 464 (755)
T ss_pred HHHHHHHHHHHhCCCEEEEEEEEcC------------------CCCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEEE
Confidence 7788899999999999999999731 3589999999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHcCCcccccccccceeecchhhhcCCHHHHHHHhccccEEeecChhhHHHHHHHHHhcCCEEEEEcC
Q 001616 688 TGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPFDKLLMVQCLKKKGHVVAVTGD 767 (1044)
Q Consensus 688 TGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~ar~sP~~K~~lV~~lq~~g~vVa~~GD 767 (1044)
||||..||++||++|||.+.. .....+.+|.+.+.++++++.+.++++.||||++|+||.++|+.||++|++|+|+||
T Consensus 465 TGD~~~tA~~IA~~lGI~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~~VamvGD 542 (755)
T TIGR01647 465 TGDHLAIAKETARRLGLGTNI--YTADVLLKGDNRDDLPSGELGEMVEDADGFAEVFPEHKYEIVEILQKRGHLVGMTGD 542 (755)
T ss_pred CCCCHHHHHHHHHHcCCCCCC--cCHHHhcCCcchhhCCHHHHHHHHHhCCEEEecCHHHHHHHHHHHHhcCCEEEEEcC
Confidence 999999999999999997521 112345667777889999999999999999999999999999999999999999999
Q ss_pred CcCCHHHHhhCCcceeeCCCchHHHhhccCEEEccCChhHHHHHHHHhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 001616 768 GTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLRWGRCVYTNIQKFIQFQLTVNVAALVINFIAAVSA 847 (1044)
Q Consensus 768 G~NDapaLk~AdVGiamg~~gt~vAk~aaDivl~dd~f~~I~~~i~~GR~~~~ni~k~i~f~l~~nv~~~~~~~~~~~~~ 847 (1044)
|+||+|||++|||||||| +|+++||++||+||+||||++|+.++++||++|+||+|+++|+++.|+..++..+++.++.
T Consensus 543 GvNDapAL~~AdVGIAm~-~gtdvAkeaADivLl~d~l~~I~~ai~~gR~~~~ni~k~i~~~~~~n~~~~~~~~~~~l~~ 621 (755)
T TIGR01647 543 GVNDAPALKKADVGIAVA-GATDAARSAADIVLTEPGLSVIVDAILESRKIFQRMKSYVIYRIAETIRIVFFFGLLILIL 621 (755)
T ss_pred CcccHHHHHhCCeeEEec-CCcHHHHHhCCEEEEcCChHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHh
Confidence 999999999999999999 8999999999999999999999999999999999999999999999999887777766654
Q ss_pred CCCchhHHHHHHHhhhhhHHHHHHhccCCCCcccccCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHhccc-----
Q 001616 848 GEVPLTAVQLLWVNLIMDTLGALALATDRPTDELMQRPPVGRTEPLITNIMWRNLLSQALYQITILLILQFKGES----- 922 (1044)
Q Consensus 848 ~~~pl~~~qlL~~nli~d~l~alala~e~p~~~lm~~~P~~~~~~li~~~~~~~i~~~~~~q~~v~~~l~~~~~~----- 922 (1044)
+ .||+|+|+||+|+++|. +++++++|++++. ++| +...+ ..+++.++..+++..+..+.++|+...
T Consensus 622 ~-~~l~~~~il~~~l~~d~-~~~~l~~~~~~~~---~~p---~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 692 (755)
T TIGR01647 622 N-FYFPPIMVVIIAILNDG-TIMTIAYDNVKPS---KLP---QRWNL-REVFTMSTVLGIYLVISTFLLLAIALDTSFFI 692 (755)
T ss_pred C-cchhHHHHHHHHHHHhH-hHhhccCCCCCCC---CCC---Cccch-HHHHHHHHHHHHHHHHHHHHHHHHHHhcccch
Confidence 4 46999999999999997 6999999998742 333 33334 367777777777776654444432221
Q ss_pred -ccC--CCcccccchhhhHHHHHHHHHHhhhcccccccccccccccHHHHHHHHHHHHHHHHH
Q 001616 923 -IFN--VSPEVNDTLIFNTFVFCQVFNEFNARKLEKRNVFKGIHKNKLFLGIIGITVVLQVVM 982 (1044)
Q Consensus 923 -~~~--~~~~~~~t~~f~~~v~~q~fn~~n~r~~~~~~~f~~~~~n~~f~~~i~~~~~~qv~~ 982 (1044)
.++ ......+|+.|..+++.|.|+.+++|+. ...|+. ..|++++.++++.+++.+++
T Consensus 693 ~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~r~~--~~~~~~-~p~~~l~~~~~~~~~~~~~~ 752 (755)
T TIGR01647 693 DKFGLQLLHGNLQSLIYLQVSISGQATIFVTRTH--GFFWSE-RPGKLLFIAFVIAQIIATFI 752 (755)
T ss_pred hcccccccHhhhHHHHHHHHHHHHHHHHheeccC--CCCccc-CCcHHHHHHHHHHHHHHHHH
Confidence 111 1233578999999999999999999974 333433 35666666666665554443
No 13
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=100.00 E-value=2.2e-123 Score=1189.90 Aligned_cols=805 Identities=22% Similarity=0.300 Sum_probs=652.9
Q ss_pred CCCCCcCHHHHHHHHhhcCCCcCCCCCCCcHHHHHHHHhhhhHHHHHHHHHHHHHhhccccCCCCccccchhHHHHHHHH
Q 001616 126 EYGINGNDEDVSRRSQLFGANTYHKPPPKGLLHFVLEAFKDTTILILLVCAALSLGFGIKEHGAEEGWYEGGSIFVAVFL 205 (1044)
Q Consensus 126 ~~GL~~~~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~illv~a~lsl~~gi~~~g~~~~~~d~~~i~~~v~l 205 (1044)
..||+.++ +++|++.||+|+++.| .++||+++++++.+|+++++++++++++.-+ .|++++.|++.+++
T Consensus 137 ~~GLs~~e--~~~r~~~yG~N~i~~~-~~s~~~ll~~~~~~p~~i~~i~~~~l~~~~~--------~~~~~~~i~~i~~~ 205 (1054)
T TIGR01657 137 SNGLTTGD--IAQRKAKYGKNEIEIP-VPSFLELLKEEVLHPFYVFQVFSVILWLLDE--------YYYYSLCIVFMSST 205 (1054)
T ss_pred ccCCCHHH--HHHHHHhcCCCeeecC-CCCHHHHHHHHHhchHHHHHHHHHHHHHhhh--------hHHHHHHHHHHHHH
Confidence 46998866 9999999999999986 4799999999999999999999877776432 58899988888888
Q ss_pred HHHHhHHHHHHHHHHHHHhhcccCCceEEEEeCCeEEEEeecccccCcEEEeC--CCCeeeccEEEEecCceeeecCCCC
Q 001616 206 VIVVSAFSNFRQARQFDKLSKISNNIKVEVVREARRLQISIFDLVVGDIVFLK--IGDQIPADGLFLDGHSLQVDESSMT 283 (1044)
Q Consensus 206 v~~v~a~~~~~~~~~~~~l~~~~~~~~v~ViR~G~~~~I~~~dLvvGDIV~l~--~Gd~VPADgill~g~~l~VDES~LT 283 (1044)
..+++.++++++.++.+++.. ++..++|+|||++++|+++||||||||.|+ +||+|||||++++|+ +.||||+||
T Consensus 206 ~~~~~~~~~~k~~~~L~~~~~--~~~~v~V~Rdg~~~~I~s~eLvpGDiv~l~~~~g~~iPaD~~ll~g~-~~VdES~LT 282 (1054)
T TIGR01657 206 SISLSVYQIRKQMQRLRDMVH--KPQSVIVIRNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLSGS-CIVNESMLT 282 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHhhc--CCeeEEEEECCEEEEEEcccCCCCCEEEEecCCCCEecceEEEEeCc-EEEeccccc
Confidence 777777777776666666542 357899999999999999999999999999 999999999999996 699999999
Q ss_pred CCCCceeecCC----------------CCceeeecceEee-------CceEEEEEEecccchhHHHHhhcCCCCCCCChh
Q 001616 284 GESDHVEVDST----------------NNPFLFSGSKVAD-------GYAQMLVVSVGMNTAWGEMMSSISSDSNERTPL 340 (1044)
Q Consensus 284 GEs~pv~k~~~----------------~~~~l~sGt~v~~-------G~~~~~V~~vG~~T~~gki~~~~~~~~~~~tpl 340 (1044)
|||.|+.|.+. +++++|+||.|.+ |.+.++|++||.+|..|++.+++...+..++++
T Consensus 283 GES~Pv~K~~~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~g~g~~~~vV~~TG~~T~~G~i~~~i~~~~~~~~~~ 362 (1054)
T TIGR01657 283 GESVPVLKFPIPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQLVRSILYPKPRVFKF 362 (1054)
T ss_pred CCccceecccCCccccccccccccccccceEEEcCCEEEEEecCCCCCcEEEEEEeCCccccchHHHHHhhCCCCCCCch
Confidence 99999999752 2457999999985 889999999999999999999998888888999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccccCCCCCCcchhHHHHHHHHHHHHHHHHHHhcchhHHH
Q 001616 341 QARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAAAVTIVVVAIPEGLPLA 420 (1044)
Q Consensus 341 q~~l~~la~~i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~ilvvavP~gLpla 420 (1044)
++.+.++...+..+++ +.+++++..+... + . .+...+..++++++++||||||++
T Consensus 363 ~~~~~~~~~~l~~~a~----i~~i~~~~~~~~~---~---~---------------~~~~~~l~~l~iiv~~vP~~LP~~ 417 (1054)
T TIGR01657 363 YKDSFKFILFLAVLAL----IGFIYTIIELIKD---G---R---------------PLGKIILRSLDIITIVVPPALPAE 417 (1054)
T ss_pred HHHHHHHHHHHHHHHH----HHHHHHHHHHHHc---C---C---------------cHHHHHHHHHHHHHhhcCchHHHH
Confidence 9988877665543333 2232222221111 0 0 456778889999999999999999
Q ss_pred HHHHHHHHHHhhccccceeccchhhhcccCeeEEeeCcccccccCceEEEEEEeccccccc-cccccCChHHHHHHHHHH
Q 001616 421 VTLTLAYSMKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKFWLGQESIVQ-ETYCKIASSIRDLFHQGV 499 (1044)
Q Consensus 421 vtl~la~~~~~m~k~~~lvr~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~i 499 (1044)
++++++++++||+|+|++||+++++|++|++|++|||||||||+|+|+|.+++..+..... .............+..++
T Consensus 418 ~ti~l~~~~~rL~k~~il~~~~~~ie~lG~v~vicfDKTGTLTen~m~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 497 (1054)
T TIGR01657 418 LSIGINNSLARLKKKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLRGVQGLSGNQEFLKIVTEDSSLKPSITHKAL 497 (1054)
T ss_pred HHHHHHHHHHHHHHCCEEEcCcccceecceeeEEEEcCCCCCccCCeeEEeEecccCccccccccccccccCchHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999875432110 000000101223344566
Q ss_pred hhcCCccccccCCCCCcceecCChhHHHHHHHHHHHcCCChH----H----------hhhcccEEEEecCCCCCceEEEE
Q 001616 500 GLNTTGSVSKLKPGSSVAEFSGSPTEKAVLSWAVLEMGMEMD----K----------VKQKYSILHVETFNSEKKRSGVL 565 (1044)
Q Consensus 500 ~~n~~~~~~~~~~~~~~~~~~gsp~e~All~~a~~~~g~~~~----~----------~~~~~~il~~~pF~s~rkrmsvv 565 (1044)
++||+.... ++ +..|||+|.|+++++.+....+.+ . ...++++++.+||+|++|||||+
T Consensus 498 a~C~~~~~~---~~----~~~Gdp~E~al~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~S~~krMsvv 570 (1054)
T TIGR01657 498 ATCHSLTKL---EG----KLVGDPLDKKMFEATGWTLEEDDESAEPTSILAVVRTDDPPQELSIIRRFQFSSALQRMSVI 570 (1054)
T ss_pred HhCCeeEEE---CC----EEecCHHHHHHHHhCCCEEECCCCcccccccccceeccCCCceEEEEEEEeecCCCCEEEEE
Confidence 677765432 11 568999999999976422221000 0 02468899999999999999999
Q ss_pred EEecCCCeEEEEecCcHHHHHHhcccccccCCeeecCChhhHHHHHHHHHHHHhcccceeeeeeeecCchhhcccchHHH
Q 001616 566 IRRKADNTTHIHWKGAAEIILAMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAYNNDVKA 645 (1044)
Q Consensus 566 v~~~~~~~~~~~~KGA~e~Il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~~A~k~l~~~~~~~~~~~~~ 645 (1044)
++..+++++++|+|||||.|+++|++. ..++.+++.+++|+++|+||||+|||++++.+ .+.....
T Consensus 571 v~~~~~~~~~~~~KGApE~Il~~c~~~------------~~p~~~~~~~~~~a~~G~RVLalA~k~l~~~~--~~~~~~~ 636 (1054)
T TIGR01657 571 VSTNDERSPDAFVKGAPETIQSLCSPE------------TVPSDYQEVLKSYTREGYRVLALAYKELPKLT--LQKAQDL 636 (1054)
T ss_pred EEEcCCCeEEEEEECCHHHHHHHcCCc------------CCChhHHHHHHHHHhcCCEEEEEEEeecCccc--hhhhhhc
Confidence 998665568899999999999999841 23567888999999999999999999997321 1111112
Q ss_pred hhhhcccCeEEEEEecccCCCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCcccccc---------------
Q 001616 646 RQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQ--------------- 710 (1044)
Q Consensus 646 ~~~~~e~~l~llG~vgi~D~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~~~~~--------------- 710 (1044)
.++..|+||+|+|+++|+||+||+++++|+.|++|||+|+|+||||+.||.+||++|||++++..
T Consensus 637 ~r~~~E~~L~flGli~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~gii~~~~~vi~~~~~~~~~~~~~ 716 (1054)
T TIGR01657 637 SRDAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIVNPSNTLILAEAEPPESGKPN 716 (1054)
T ss_pred cHHHHhcCceEEEEEEEecCCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCceEEEeecccccCCCCc
Confidence 34567899999999999999999999999999999999999999999999999999999864321
Q ss_pred ---------------------------------cccceeecchhhhc---CCHHHHHHHhccccEEeecChhhHHHHHHH
Q 001616 711 ---------------------------------VEKGEVVEGVEFRN---YTDEERIQKVDKIRVMARSSPFDKLLMVQC 754 (1044)
Q Consensus 711 ---------------------------------~~~~~vi~g~~~~~---~~~~~~~~~~~~~~V~ar~sP~~K~~lV~~ 754 (1044)
.....+++|++++. +.++++.+.++++.||||++|+||.++|+.
T Consensus 717 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~itG~~l~~l~~~~~~~l~~~~~~~~VfAR~sP~qK~~iV~~ 796 (1054)
T TIGR01657 717 QIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQAHSPELLLRLLSHTTVFARMAPDQKETLVEL 796 (1054)
T ss_pred eEEEEecCccccccccccccCcccccchhhhcccceEEEEEcHHHHHHHHhhHHHHHHHHhcCeEEEecCHHHHHHHHHH
Confidence 01136899999876 566889999999999999999999999999
Q ss_pred HHhcCCEEEEEcCCcCCHHHHhhCCcceeeCCCchHHHhhccCEEEccCChhHHHHHHHHhHHHHHhHHHHHHHHHHHHH
Q 001616 755 LKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLRWGRCVYTNIQKFIQFQLTVNV 834 (1044)
Q Consensus 755 lq~~g~vVa~~GDG~NDapaLk~AdVGiamg~~gt~vAk~aaDivl~dd~f~~I~~~i~~GR~~~~ni~k~i~f~l~~nv 834 (1044)
||+.|++|||||||+||+||||+||||||||. +|+ ..+||+++.+|||++|+++++|||+++.|++++++|.+.+++
T Consensus 797 lq~~g~~V~m~GDG~ND~~ALK~AdVGIam~~--~da-s~AA~f~l~~~~~~~I~~~I~eGR~~l~~~~~~~~~~~~~~~ 873 (1054)
T TIGR01657 797 LQKLDYTVGMCGDGANDCGALKQADVGISLSE--AEA-SVAAPFTSKLASISCVPNVIREGRCALVTSFQMFKYMALYSL 873 (1054)
T ss_pred HHhCCCeEEEEeCChHHHHHHHhcCcceeecc--ccc-eeecccccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999984 354 489999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHHhcCCCchhHHHHHHHhhhhhHHHHHHhccCCCCcccccCCCCCCCCCcccHHHHHHHHHHHHHHHHHHH
Q 001616 835 AALVINFIAAVSAGEVPLTAVQLLWVNLIMDTLGALALATDRPTDELMQRPPVGRTEPLITNIMWRNLLSQALYQITILL 914 (1044)
Q Consensus 835 ~~~~~~~~~~~~~~~~pl~~~qlL~~nli~d~l~alala~e~p~~~lm~~~P~~~~~~li~~~~~~~i~~~~~~q~~v~~ 914 (1044)
...+..++. +....||+++|+||+|++++++++++|+.++|.+++|++|| .++++++.++.++++|+++++++.+
T Consensus 874 ~~~~~~~~l--~~~~~~l~~~Q~l~i~li~~~~~~l~l~~~~p~~~l~~~~P---~~~l~~~~~~~si~~q~~i~~~~~~ 948 (1054)
T TIGR01657 874 IQFYSVSIL--YLIGSNLGDGQFLTIDLLLIFPVALLMSRNKPLKKLSKERP---PSNLFSVYILTSVLIQFVLHILSQV 948 (1054)
T ss_pred HHHHHHHHH--HHccCcCccHHHHHHHHHHHHHHHHHHHcCCchhhcCCCCC---CccccCHHHHHHHHHHHHHHHHHHH
Confidence 775544432 33458999999999999999999999999999999999999 4689999999999999999988876
Q ss_pred HHHHhcc--ccc----C--C----CcccccchhhhHHHHHHHHHHhhhcccccccccccccccHHHHHHHHHHHHHHHH-
Q 001616 915 ILQFKGE--SIF----N--V----SPEVNDTLIFNTFVFCQVFNEFNARKLEKRNVFKGIHKNKLFLGIIGITVVLQVV- 981 (1044)
Q Consensus 915 ~l~~~~~--~~~----~--~----~~~~~~t~~f~~~v~~q~fn~~n~r~~~~~~~f~~~~~n~~f~~~i~~~~~~qv~- 981 (1044)
..++... .++ . . .+...+|++| .++.+|.++.++++.. ..++.+++++|++|++.++++++++++
T Consensus 949 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~T~~f-~~~~~~~~~~~~~~~~-g~pf~~~~~~N~~~~~~~~~~~~~~~~~ 1026 (1054)
T TIGR01657 949 YLVFELHAQPWYKPENPVDLEKENFPNLLNTVLF-FVSSFQYLITAIVNSK-GPPFREPIYKNKPFVYLLITGLGLLLVL 1026 (1054)
T ss_pred HHHHHHhhCCCccCCCCCCcccccCccHHHHHHH-HHHHHHHHHheEEEcC-CcchhhhHHHhHHHHHHHHHHHHHHHHh
Confidence 6654432 232 1 1 0223468999 6667777777888764 445556999999998888887776653
Q ss_pred ---HHHHhhHhhccCCCChHHHH
Q 001616 982 ---MVEFLKKFADTERLNWQQWL 1001 (1044)
Q Consensus 982 ---~v~~~~~~f~~~~l~~~~w~ 1001 (1044)
.+++++.+|+++|++. .|-
T Consensus 1027 ~~~~~~~l~~~~~~~~~~~-~~~ 1048 (1054)
T TIGR01657 1027 LLDPHPLLGKILQIVPLPQ-EFR 1048 (1054)
T ss_pred hhCCCHHHHhhheeeeCCH-HHH
Confidence 2477899999999985 443
No 14
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1e-124 Score=1078.14 Aligned_cols=883 Identities=25% Similarity=0.388 Sum_probs=730.4
Q ss_pred CHHHHHHHhCCCcCCCCCcCHHHHHHHHhhcCCCcCCCCCCCcHHHHHHHHhhhhHHHHHHHHHHHHHhh-cccc---CC
Q 001616 113 GVEGVANALGTNPEYGINGNDEDVSRRSQLFGANTYHKPPPKGLLHFVLEAFKDTTILILLVCAALSLGF-GIKE---HG 188 (1044)
Q Consensus 113 gv~~l~~~l~t~~~~GL~~~~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~illv~a~lsl~~-gi~~---~g 188 (1044)
.+++|++++++|..+||+..+ +.+++.+-|+|.+++|+..+-|..+.+|+...+.++++++|+++++. ++.. +.
T Consensus 43 ~~~eL~~r~~t~~~~Glt~~~--A~~~L~rdG~NaL~Ppk~t~~wikf~kq~f~~~~ill~~~a~l~~~~y~~~~s~~~~ 120 (1019)
T KOG0203|consen 43 SVDELCERYGTSVSQGLTSQE--AAEKLARDGPNALTPPKTTPEWIKFLRQLFGGFSILLWIGAILCFVAYGIQASTEDD 120 (1019)
T ss_pred CHHHHHHHhcCChhhcccHHH--HHhhhccCCCCCCCCCCCChHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhcccCCC
Confidence 799999999999999999876 99999999999999999999999999999999999999999999653 3311 11
Q ss_pred -CCccccchhHHHHHHHHHHHHhHHHHHHHHHHHHHh-hcc--cCCceEEEEeCCeEEEEeecccccCcEEEeCCCCeee
Q 001616 189 -AEEGWYEGGSIFVAVFLVIVVSAFSNFRQARQFDKL-SKI--SNNIKVEVVREARRLQISIFDLVVGDIVFLKIGDQIP 264 (1044)
Q Consensus 189 -~~~~~~d~~~i~~~v~lv~~v~a~~~~~~~~~~~~l-~~~--~~~~~v~ViR~G~~~~I~~~dLvvGDIV~l~~Gd~VP 264 (1044)
..+..|-|..+. .+++++.+-.|.|+++-.+. +.. .-+..++|+|||+.+.+..+||||||+|.++-||+||
T Consensus 121 ~~~~nly~giiL~----~vv~vtg~~~~~qe~ks~~im~sF~~l~P~~~~ViRdg~k~~i~~eelVvGD~v~vk~GdrVP 196 (1019)
T KOG0203|consen 121 PSDDNLYLGIVLA----AVVIVTGLFSYYQEAKSSKIMDSFKNLVPQQALVIRDGEKMTINAEELVVGDLVEVKGGDRVP 196 (1019)
T ss_pred CCCcceEEEEEEE----EEEEEEecCCCccchhhHHHHHHHhccchhhheeeecceeEEechhhcccccceeeccCCccc
Confidence 122334443322 23334444444444433332 222 2467899999999999999999999999999999999
Q ss_pred ccEEEEecCceeeecCCCCCCCCceeecCC--------CCceeeecceEeeCceEEEEEEecccchhHHHHhhcCCCCCC
Q 001616 265 ADGLFLDGHSLQVDESSMTGESDHVEVDST--------NNPFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSSISSDSNE 336 (1044)
Q Consensus 265 ADgill~g~~l~VDES~LTGEs~pv~k~~~--------~~~~l~sGt~v~~G~~~~~V~~vG~~T~~gki~~~~~~~~~~ 336 (1044)
||.++++++.+++|+|+|||||+|.+..+. ..++-|.+|.+.+|.++++|++||.+|..|++.......+..
T Consensus 197 ADiRiis~~g~~vdnsslTGesEP~~~~~~~t~~~~~Et~Ni~f~st~~veG~~~givi~tGd~Tv~G~ia~l~~~~~~~ 276 (1019)
T KOG0203|consen 197 ADIRIISATGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTGRGIVIATGDRTVMGRIASLASGLEDG 276 (1019)
T ss_pred ceeEEEEecceeEeccccccccCCccCCccccccCchhheeeeeeeeEEecceEEEEEEecCCceEEeehhhhhccCCCC
Confidence 999999999999999999999999988753 356789999999999999999999999999999998887889
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccccCCCCCCcchhHHHHHHHHHHHHHHHHHHhcch
Q 001616 337 RTPLQARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAAAVTIVVVAIPEG 416 (1044)
Q Consensus 337 ~tplq~~l~~la~~i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~ilvvavP~g 416 (1044)
++|.+..++++..++..+++.+++++|++.++ .+. .++.++...+.++++.+|+|
T Consensus 277 ~t~~~~ei~~fi~~it~vAi~~~i~fF~~~~~---~gy----------------------~~l~avv~~i~iivAnvPeG 331 (1019)
T KOG0203|consen 277 KTPIAKEIEHFIHIITGVAIFLGISFFILALI---LGY----------------------EWLRAVVFLIGIIVANVPEG 331 (1019)
T ss_pred CCcchhhhhchHHHHHHHHHHHHHHHHHHHHh---hcc----------------------hhHHHhhhhheeEEecCcCC
Confidence 99999999999999988888888887766432 121 56677777889999999999
Q ss_pred hHHHHHHHHHHHHHhhccccceeccchhhhcccCeeEEeeCcccccccCceEEEEEEeccccccccc-------cccCCh
Q 001616 417 LPLAVTLTLAYSMKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKFWLGQESIVQET-------YCKIAS 489 (1044)
Q Consensus 417 Lplavtl~la~~~~~m~k~~~lvr~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~-------~~~~~~ 489 (1044)
||..+|.+|....+||++++.+||++.+.|+||+.++||+|||||||+|+|+|.++|.++.....+. .....+
T Consensus 332 L~~tvTv~LtltakrMa~Knc~vknLeavetlGsts~I~SDktGTlTqnrMtVahlw~d~~i~~~d~~~~~~~~~~~~~~ 411 (1019)
T KOG0203|consen 332 LLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLWFDNQIHEADTTEDQSGQSFDKSS 411 (1019)
T ss_pred ccceehhhHHHHHHHHhhceeEEeeeeheeecccceeEeecceeeEEecceEEEeeccCCceeeeechhhhhcccccccC
Confidence 9999999999999999999999999999999999999999999999999999999999875443221 011112
Q ss_pred HHHHHHHHHHhhcCCccccccCCCC--CcceecCChhHHHHHHHHHHHcCCChHHhhhcccEEEEecCCCCCceEEEEEE
Q 001616 490 SIRDLFHQGVGLNTTGSVSKLKPGS--SVAEFSGSPTEKAVLSWAVLEMGMEMDKVKQKYSILHVETFNSEKKRSGVLIR 567 (1044)
Q Consensus 490 ~~~~~l~~~i~~n~~~~~~~~~~~~--~~~~~~gsp~e~All~~a~~~~g~~~~~~~~~~~il~~~pF~s~rkrmsvvv~ 567 (1044)
.....+....++|+.+.....+.+- .+....|++.|.||++|+. ..-.+.+..|+.++.+...||||.+|+.-.+.+
T Consensus 412 ~~~~~l~r~~~lCn~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e-~~~~~~~~~R~~~~kv~eipfNSt~Kyqlsih~ 490 (1019)
T KOG0203|consen 412 ATFIALSRIATLCNRAVFKPGQDDVPVLKRDVAGDASEVALLKFIE-LILGSVMELRERNPKVAEIPFNSTNKYQLSIHE 490 (1019)
T ss_pred chHHHHHHHHHHhCcceecccccCCceeeeeccCCHHHHHHHHHHH-HhcchHHHHHHhhHHhhcCCcccccceEEEEEe
Confidence 2334455566777777665321111 1346789999999999997 444455788899999999999999999988887
Q ss_pred ecC--CCeEEEEecCcHHHHHHhcccccccCCeeecCChhhHHHHHHHHHHHHhcccceeeeeeeecCchhhcccchH-H
Q 001616 568 RKA--DNTTHIHWKGAAEIILAMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAYNNDV-K 644 (1044)
Q Consensus 568 ~~~--~~~~~~~~KGA~e~Il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~~A~k~l~~~~~~~~~~~-~ 644 (1044)
..+ +.++.+.+|||||.++++|+.+.- +|+..|++++.++.+.+...++...|-||++||++.+++++....... .
T Consensus 491 ~~d~~~~~~~l~mKGape~il~~CSTi~i-~g~e~pld~~~~~~f~~ay~~lg~~GerVlgF~~~~l~~~~~p~~~~f~~ 569 (1019)
T KOG0203|consen 491 TEDPSDPRFLLVMKGAPERILDRCSTILI-NGEEKPLDEKLKEAFQEAYLELGGLGERVLGFCDLELPDEKFPRGFQFDT 569 (1019)
T ss_pred cCCCCCccceeeecCChHHHHhhccceee-cCCCCCcCHHHHHHHHHHHHHhhhcchHHHHHHHHhcchhcCCCceEeec
Confidence 654 234778899999999999998765 899999999999999999999999999999999999985432111111 1
Q ss_pred HhhhhcccCeEEEEEecccCCCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCccccccc-------------
Q 001616 645 ARQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQV------------- 711 (1044)
Q Consensus 645 ~~~~~~e~~l~llG~vgi~D~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~~~~~~------------- 711 (1044)
...+.+..++.|+|++.+-||+|..+|+||..||.|||+|+|+|||++.||+|||++.||+.+..+.
T Consensus 570 d~~n~p~~nl~FlGl~s~idPPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~e~~a~r~~~~v~ 649 (1019)
T KOG0203|consen 570 DDVNFPTDNLRFLGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETVEDIAKRLNIPVE 649 (1019)
T ss_pred CCCCCcchhccccchhhccCCCcccCchhhhhhhhhCceEEEEecCccchhhhhhhheeeecCCchhhhhhHHhcCCccc
Confidence 2234567899999999999999999999999999999999999999999999999999988754331
Q ss_pred ------ccceeecchhhhcCCHHHHHHHhcccc--EEeecChhhHHHHHHHHHhcCCEEEEEcCCcCCHHHHhhCCccee
Q 001616 712 ------EKGEVVEGVEFRNYTDEERIQKVDKIR--VMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLS 783 (1044)
Q Consensus 712 ------~~~~vi~g~~~~~~~~~~~~~~~~~~~--V~ar~sP~~K~~lV~~lq~~g~vVa~~GDG~NDapaLk~AdVGia 783 (1044)
..+.|++|.++..++++++++++.+-. ||||.||+||+.||+..|++|.+|++||||+||+||||+||||||
T Consensus 650 ~vn~~~a~a~VihG~eL~~~~~~qld~il~nh~eIVFARTSPqQKLiIVe~cQr~GaiVaVTGDGVNDsPALKKADIGVA 729 (1019)
T KOG0203|consen 650 QVNSRDAKAAVIHGSELPDMSSEQLDELLQNHQEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVA 729 (1019)
T ss_pred ccCccccceEEEecccccccCHHHHHHHHHhCCceEEEecCccceEEeEhhhhhcCcEEEEeCCCcCCChhhccccccee
Confidence 356899999999999999999998765 999999999999999999999999999999999999999999999
Q ss_pred eCCCchHHHhhccCEEEccCChhHHHHHHHHhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHhhh
Q 001616 784 MGIQGTEVAKESSDIVILDDDFTSVATVLRWGRCVYTNIQKFIQFQLTVNVAALVINFIAAVSAGEVPLTAVQLLWVNLI 863 (1044)
Q Consensus 784 mg~~gt~vAk~aaDivl~dd~f~~I~~~i~~GR~~~~ni~k~i~f~l~~nv~~~~~~~~~~~~~~~~pl~~~qlL~~nli 863 (1044)
||++|++++|+|||+||+||||++|+..+++||-+|+|+||.|.|.|+.|+..+...+++.+++.|.||.++++|.++|.
T Consensus 730 MGiaGSDvsKqAADmILLDDNFASIVtGVEEGRLiFDNLKKsIAYTLTsNipEI~PfL~fi~~giPLplgtitIL~IDLg 809 (1019)
T KOG0203|consen 730 MGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLLFILFGIPLPLGTVTILCIDLG 809 (1019)
T ss_pred eccccchHHHhhcceEEecCcchhheeecccceehhhhHHHHHHHHHHhcchhHhHHHHHHHhCCCcccchhhhhhhHhh
Confidence 99999999999999999999999999999999999999999999999999999999998889999999999999999999
Q ss_pred hhHHHHHHhccCCCCcccccCCCCC-CCCCcccHHHHHHHHH-HHHHHHHHHHHHHHhc--------ccccCCC------
Q 001616 864 MDTLGALALATDRPTDELMQRPPVG-RTEPLITNIMWRNLLS-QALYQITILLILQFKG--------ESIFNVS------ 927 (1044)
Q Consensus 864 ~d~l~alala~e~p~~~lm~~~P~~-~~~~li~~~~~~~i~~-~~~~q~~v~~~l~~~~--------~~~~~~~------ 927 (1044)
.|..||++||+|+|+.++|+|+|+. +++.|++......-.+ .+.+|.+..|+-+|.. ..+.++.
T Consensus 810 TDmvPAiSLAYE~aEsDIM~r~PR~p~~D~LVN~rLi~~aY~qIG~iqa~agF~tYFvima~nGf~P~~L~~ir~~W~d~ 889 (1019)
T KOG0203|consen 810 TDIVPAISLAYEKAESDIMLRPPRNPKDDKLVNKRLISYSYLQIGMIQALAGFFTYFVIMAENGFLPRTLVGLREDWDDD 889 (1019)
T ss_pred cccchhhhHhccCchhhHHhcCCCCCcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHhhHHhhhhh
Confidence 9999999999999999999999998 6678888765443322 2445554443333211 1111110
Q ss_pred ---------------------cccccchhhhHHHHHHHHHHhhhcccccccccccccccHHHHHHHHHHHHHHH--HHHH
Q 001616 928 ---------------------PEVNDTLIFNTFVFCQVFNEFNARKLEKRNVFKGIHKNKLFLGIIGITVVLQV--VMVE 984 (1044)
Q Consensus 928 ---------------------~~~~~t~~f~~~v~~q~fn~~n~r~~~~~~~f~~~~~n~~f~~~i~~~~~~qv--~~v~ 984 (1044)
+.+.+|..|.++|.+|.++.+-|.. ++.++|+.-++||.++.++++.+++.. .+++
T Consensus 890 ~~~Dl~DsyGQeWtyeqRk~le~tc~taFfvsIvV~Q~adLii~KT-RRnSlfqqGmrN~vl~f~v~~e~~La~fl~y~p 968 (1019)
T KOG0203|consen 890 GVNDLTDSYGQEWTYEQRKYLEYTCYTAFFISIVVVQWADLIICKT-RRNSIFQQGMRNKVLIFAVIFETCLACFLCYCP 968 (1019)
T ss_pred hhhhhhhhccccccHHHHHHHHHhhhhheeeeehHHhHhhHHhhhc-chhHHHHhhhhhhhHHHHHHHHHHHHHHHhcCc
Confidence 2456789999999999999998775 467888855899999888876555543 3456
Q ss_pred HhhHhhccCCCChHHHHHHHHHHHHHHHHHHHhhhccc--CCchhhh
Q 001616 985 FLKKFADTERLNWQQWLACIAMAAFTWPIGWAVKFIPV--TEKPIFS 1029 (1044)
Q Consensus 985 ~~~~~f~~~~l~~~~w~~~i~~~~~~~~~~~~~k~i~~--~~~~~~~ 1029 (1044)
.....+++.||.|..|+..+.++++.|+++++.|++-. |..++.+
T Consensus 969 g~~~~l~~~pl~~~~wl~a~P~~ilIfvydE~Rk~~IR~~P~gw~e~ 1015 (1019)
T KOG0203|consen 969 GVLYALGMYPLKFQWWLVAFPFGILIFVYDEVRKLFIRRYPGGWLEK 1015 (1019)
T ss_pred cHHHHhccCCCCcEEEEecccceeeeeeHHHHHhHhhhhCCCchhhh
Confidence 67888999999999999999999999999999997643 4444443
No 15
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=100.00 E-value=5.9e-111 Score=1078.80 Aligned_cols=841 Identities=23% Similarity=0.298 Sum_probs=640.1
Q ss_pred cCCCcCCCCCCCcH---HHHHHHHhhhhHHHHHHHHHHHHHhhccccCCCCccccchhHHHHHHHHHHHHhHHHHHHHHH
Q 001616 143 FGANTYHKPPPKGL---LHFVLEAFKDTTILILLVCAALSLGFGIKEHGAEEGWYEGGSIFVAVFLVIVVSAFSNFRQAR 219 (1044)
Q Consensus 143 ~G~N~~~~~~~~~~---~~~~~~~~~~~~~~illv~a~lsl~~gi~~~g~~~~~~d~~~i~~~v~lv~~v~a~~~~~~~~ 219 (1044)
|.+|.+...|...+ ++.+|+||+++.+++|++++++++++++++.+ ..+.+++++++++++++.++.++.
T Consensus 1 ~~~N~i~tskY~~~~flp~~l~~qf~~~~N~yfl~i~ilq~ip~~s~~~-------~~t~~~pL~~v~~~~~~~~~~ed~ 73 (1057)
T TIGR01652 1 FCSNKISTTKYTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPILSPTY-------RGTSIVPLAFVLIVTAIKEAIEDI 73 (1057)
T ss_pred CCCCcccCccCcchhhhHHHHHHHHHHHhhHHHHHHHHHHcCCCcCCCC-------ccHhHHhHHHHHHHHHHHHHHHHH
Confidence 56788887765554 68999999999999999999999998876443 234567777888888889988888
Q ss_pred HHHHhhcccCCceEEEEeC-CeEEEEeecccccCcEEEeCCCCeeeccEEEEecCc----eeeecCCCCCCCCceeecCC
Q 001616 220 QFDKLSKISNNIKVEVVRE-ARRLQISIFDLVVGDIVFLKIGDQIPADGLFLDGHS----LQVDESSMTGESDHVEVDST 294 (1044)
Q Consensus 220 ~~~~l~~~~~~~~v~ViR~-G~~~~I~~~dLvvGDIV~l~~Gd~VPADgill~g~~----l~VDES~LTGEs~pv~k~~~ 294 (1044)
++++.++..|+..++|+|+ |++++|+++||+|||+|.|++||+|||||+++++++ +.||||+|||||.|+.|.+.
T Consensus 74 ~r~~~d~~~n~~~~~v~~~~~~~~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~ss~~~g~~~v~~s~l~GEs~~~~k~~~ 153 (1057)
T TIGR01652 74 RRRRRDKEVNNRLTEVLEGHGQFVEIPWKDLRVGDIVKVKKDERIPADLLLLSSSEPDGVCYVETANLDGETNLKLRQAL 153 (1057)
T ss_pred HHHHhHHHHhCcEEEEECCCCcEEEeeeecccCCCEEEEcCCCcccceEEEEeccCCCceEEEEeeccCCeecceEeecc
Confidence 8888887778899999997 899999999999999999999999999999998654 79999999999999988631
Q ss_pred ----------------------------------------------CCceeeecceEee-CceEEEEEEecccchhHHHH
Q 001616 295 ----------------------------------------------NNPFLFSGSKVAD-GYAQMLVVSVGMNTAWGEMM 327 (1044)
Q Consensus 295 ----------------------------------------------~~~~l~sGt~v~~-G~~~~~V~~vG~~T~~gki~ 327 (1044)
.++++++||.+.+ |++.++|++||.+|.+ +
T Consensus 154 ~~~~~~~~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~nt~~~~gvVvyTG~~Tk~---~ 230 (1057)
T TIGR01652 154 EETQKMLDEDDIKNFSGEIECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKL---M 230 (1057)
T ss_pred hhhhccCChhhHhhceEEEEEcCCCCcceEEEEEEEECCCCcccCCHHHhHhcCCEecCCCeEEEEEEEEchhhhh---h
Confidence 1257889999988 9999999999999955 4
Q ss_pred hhcCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccccCCC-CCCcchhHHHHHHHHHHHH
Q 001616 328 SSISSDSNERTPLQARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGS-NTDIDDVFNAVVSIVAAAV 406 (1044)
Q Consensus 328 ~~~~~~~~~~tplq~~l~~la~~i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ai 406 (1044)
.+....+.+.|++|+++|++...+..+.++++++++++... +.... ....|... ..........++..+..++
T Consensus 231 ~n~~~~~~k~s~le~~ln~~~~~l~~~~i~l~~i~~i~~~~--~~~~~----~~~~~yl~~~~~~~~~~~~~~~~~~~~~ 304 (1057)
T TIGR01652 231 RNATQAPSKRSRLEKELNFLIIILFCLLFVLCLISSVGAGI--WNDAH----GKDLWYIRLDVSERNAAANGFFSFLTFL 304 (1057)
T ss_pred hcCCCCcccccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHh--eeccc----CCCccceecCcccccchhHHHHHHHHHH
Confidence 55556677899999999999888877777666655554211 11100 01122110 0000111123445667888
Q ss_pred HHHHHHhcchhHHHHHHHHHHHH------Hhhccc----cceeccchhhhcccCeeEEeeCcccccccCceEEEEEEecc
Q 001616 407 TIVVVAIPEGLPLAVTLTLAYSM------KRMMTD----QAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKFWLGQ 476 (1044)
Q Consensus 407 ~ilvvavP~gLplavtl~la~~~------~~m~k~----~~lvr~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~ 476 (1044)
.+++.++|++||..++++++..+ ++|.++ +++||+++++|+||++++||||||||||+|+|+++++++++
T Consensus 305 ~L~~~~IPisL~v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i~g 384 (1057)
T TIGR01652 305 ILFSSLIPISLYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAG 384 (1057)
T ss_pred HHHhhhcceeeeehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEECC
Confidence 99999999999999999999988 788875 49999999999999999999999999999999999999987
Q ss_pred cccccccc----------c-----------c-----C-C-------------hHHHHHHHHHHhhcCCccccccCCC-CC
Q 001616 477 ESIVQETY----------C-----------K-----I-A-------------SSIRDLFHQGVGLNTTGSVSKLKPG-SS 515 (1044)
Q Consensus 477 ~~~~~~~~----------~-----------~-----~-~-------------~~~~~~l~~~i~~n~~~~~~~~~~~-~~ 515 (1044)
..|..... . . . + ......+..++++||++.....+++ ..
T Consensus 385 ~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lC~~v~~~~~~~~~~~ 464 (1057)
T TIGR01652 385 VSYGDGFTEIKDAIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGPEE 464 (1057)
T ss_pred EEecCCcchHHHHhhhcccccccccccccccccccccCcHHHHHhhhcCCchhHHHHHHHHHHHhcCcccccccCCCCCc
Confidence 66542100 0 0 0 0 0112234456777887665431111 11
Q ss_pred cceecCChhHHHHHHHHHHHcCCChHH--------------hhhcccEEEEecCCCCCceEEEEEEecCCCeEEEEecCc
Q 001616 516 VAEFSGSPTEKAVLSWAVLEMGMEMDK--------------VKQKYSILHVETFNSEKKRSGVLIRRKADNTTHIHWKGA 581 (1044)
Q Consensus 516 ~~~~~gsp~e~All~~a~~~~g~~~~~--------------~~~~~~il~~~pF~s~rkrmsvvv~~~~~~~~~~~~KGA 581 (1044)
..+..+||+|.||+++|. ..|+.+.. ...+|++++++||+|+||||||+++.++++ +.+|+|||
T Consensus 465 ~~y~~~sp~E~ALl~~a~-~~g~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~s~rKrmSviv~~~~~~-~~l~~KGA 542 (1057)
T TIGR01652 465 ITYQAASPDEAALVKAAR-DVGFVFFERTPKSISLLIEMHGETKEYEILNVLEFNSDRKRMSVIVRNPDGR-IKLLCKGA 542 (1057)
T ss_pred eEEEccCCcHHHHHHHHH-HCCCEEEEecCCceEEEEEeCCCEEEEEEEEecccCCCCCeEEEEEEeCCCe-EEEEEeCc
Confidence 335679999999999998 88876532 224689999999999999999999987654 88999999
Q ss_pred HHHHHHhcccccccCCeeecCChhhHHHHHHHHHHHHhcccceeeeeeeecCchhhccc---------------chHHHh
Q 001616 582 AEIILAMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAYN---------------NDVKAR 646 (1044)
Q Consensus 582 ~e~Il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~~A~k~l~~~~~~~~---------------~~~~~~ 646 (1044)
||.|+++|++. +++.++++++++++|+.+|+||+++|||.+++++.... +..+..
T Consensus 543 ~e~il~~~~~~----------~~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~~ 612 (1057)
T TIGR01652 543 DTVIFKRLSSG----------GNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDVV 612 (1057)
T ss_pred HHHHHHHhhcc----------chhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhhhhHHHHHHHH
Confidence 99999999741 23457788999999999999999999999986532110 000111
Q ss_pred hhhcccCeEEEEEecccCCCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCccccccc---------------
Q 001616 647 QRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQV--------------- 711 (1044)
Q Consensus 647 ~~~~e~~l~llG~vgi~D~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~~~~~~--------------- 711 (1044)
.+..|+||+|+|++|++||+||||+++|+.|++|||+|||+|||+.+||.+||++|||++.+...
T Consensus 613 ~~~iE~~L~~lG~~gieD~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~~~~ 692 (1057)
T TIGR01652 613 AESIEKDLILLGATAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLDATRSVE 692 (1057)
T ss_pred HHHHHhcCEEEEEEEEhhhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhhHHHH
Confidence 24578999999999999999999999999999999999999999999999999999999754310
Q ss_pred ---------------------ccceeecchhhhcCCHHH----HHHHhcccc--EEeecChhhHHHHHHHHHhc-CCEEE
Q 001616 712 ---------------------EKGEVVEGVEFRNYTDEE----RIQKVDKIR--VMARSSPFDKLLMVQCLKKK-GHVVA 763 (1044)
Q Consensus 712 ---------------------~~~~vi~g~~~~~~~~~~----~~~~~~~~~--V~ar~sP~~K~~lV~~lq~~-g~vVa 763 (1044)
...++++|++++.+.+++ +.+.+.+++ |+||++|+||.++|+.+|+. |++|+
T Consensus 693 ~~i~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~~vl 772 (1057)
T TIGR01652 693 AAIKFGLEGTSEEFNNLGDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTTL 772 (1057)
T ss_pred HHHHHHHHHHHHhhhhhccCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCCCeEE
Confidence 123689999998665543 445555554 99999999999999999998 99999
Q ss_pred EEcCCcCCHHHHhhCCcceeeCCCchH--HHhhccCEEEccCChhHHHHHH-HHhHHHHHhHHHHHHHHHHHHHHHHHHH
Q 001616 764 VTGDGTNDAPALKEADVGLSMGIQGTE--VAKESSDIVILDDDFTSVATVL-RWGRCVYTNIQKFIQFQLTVNVAALVIN 840 (1044)
Q Consensus 764 ~~GDG~NDapaLk~AdVGiamg~~gt~--vAk~aaDivl~dd~f~~I~~~i-~~GR~~~~ni~k~i~f~l~~nv~~~~~~ 840 (1044)
|||||+||+||||+|||||++ .|+| +|+++||+++. +|+.+.+++ .|||++|+|++++++|++++|++.+++.
T Consensus 773 ~iGDG~ND~~mlk~AdVGIgi--~g~eg~qA~~aaD~~i~--~F~~L~~lll~~GR~~~~r~~~~i~~~~~kn~~~~~~~ 848 (1057)
T TIGR01652 773 AIGDGANDVSMIQEADVGVGI--SGKEGMQAVMASDFAIG--QFRFLTKLLLVHGRWSYKRISKMILYFFYKNLIFAIIQ 848 (1057)
T ss_pred EEeCCCccHHHHhhcCeeeEe--cChHHHHHHHhhhhhhh--hHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999965 5666 79999999998 499999987 8899999999999999999999999999
Q ss_pred HHHHHhcC---CCchhHHHHHHHhhhhhHHHHHHhcc--CCCCcccccCCCC----CCCCCcccHHHHHHHHHHHHHHHH
Q 001616 841 FIAAVSAG---EVPLTAVQLLWVNLIMDTLGALALAT--DRPTDELMQRPPV----GRTEPLITNIMWRNLLSQALYQIT 911 (1044)
Q Consensus 841 ~~~~~~~~---~~pl~~~qlL~~nli~d~l~alala~--e~p~~~lm~~~P~----~~~~~li~~~~~~~i~~~~~~q~~ 911 (1044)
+++.++++ .+|+++++++|+|++++++|++++|. +++++++|.++|+ +++.++++...+..|++.++||.+
T Consensus 849 ~~~~~~~~~s~~~~~~~~~l~~~n~~~t~lp~~~l~~~d~~~~~~~l~~~P~ly~~~~~~~~~~~~~f~~~~~~~~~~~~ 928 (1057)
T TIGR01652 849 FWYSFYNGFSGQTLYEGWYMVLYNVFFTALPVISLGVFDQDVSASLSLRYPQLYREGQKGQGFSTKTFWGWMLDGIYQSL 928 (1057)
T ss_pred HHHHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhChHHHHHhhhcCCCCHHHHHHHHHHHHHHHH
Confidence 99988755 45789999999999999999999985 5668889999997 667888888888888899999998
Q ss_pred HHHHHHHhcc---cccCCCcccccchhhhHHHHHHHHHHhhhcccccccccccccccHHHHHHHHHHHHHHHHHHHHhhH
Q 001616 912 ILLILQFKGE---SIFNVSPEVNDTLIFNTFVFCQVFNEFNARKLEKRNVFKGIHKNKLFLGIIGITVVLQVVMVEFLKK 988 (1044)
Q Consensus 912 v~~~l~~~~~---~~~~~~~~~~~t~~f~~~v~~q~fn~~n~r~~~~~~~f~~~~~n~~f~~~i~~~~~~qv~~v~~~~~ 988 (1044)
+++++.+... .... +........|.++++..+....|++-.-..+.| +++.+.++.+++++.+++..+...
T Consensus 929 ii~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w-----t~~~~~~~~~S~~~~~~~~~~~~~ 1002 (1057)
T TIGR01652 929 VIFFFPMFAYILGDFVS-SGSLDDFSSVGVIVFTALVVIVNLKIALEINRW-----NWISLITIWGSILVWLIFVIVYSS 1002 (1057)
T ss_pred HHHHHHHHHHcCCcccc-CCcccchhhHHHHHHHHHHHHHHHHHHHHHhHh-----HHHHHHHHHHHHHHHHHHHHHHHh
Confidence 8766544321 1111 111122223344444444444444432111111 122223333444443333222221
Q ss_pred hh---------ccCCCChHHHHHHHHHHHHHHHHHHHhhhcc
Q 001616 989 FA---------DTERLNWQQWLACIAMAAFTWPIGWAVKFIP 1021 (1044)
Q Consensus 989 ~f---------~~~~l~~~~w~~~i~~~~~~~~~~~~~k~i~ 1021 (1044)
++ ...--++..|+..+++..+++++.++.|.+.
T Consensus 1003 ~~~~~~~~~~~~~~~~s~~f~l~~ll~~~~~l~p~~~~~~~~ 1044 (1057)
T TIGR01652 1003 IFPSPAFYKAAPRVMGTFGFWLVLLVIVLISLLPRFTYKAIQ 1044 (1057)
T ss_pred hcccccHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11 1111357789988888888888888887764
No 16
>PLN03190 aminophospholipid translocase; Provisional
Probab=100.00 E-value=1.4e-102 Score=990.31 Aligned_cols=750 Identities=20% Similarity=0.274 Sum_probs=591.0
Q ss_pred hcCCCcCCCCCCC---cHHHHHHHHhhhhHHHHHHHHHHHHHhhccccCCCCccccchhHHHHHHHHHHHHhHHHHHHHH
Q 001616 142 LFGANTYHKPPPK---GLLHFVLEAFKDTTILILLVCAALSLGFGIKEHGAEEGWYEGGSIFVAVFLVIVVSAFSNFRQA 218 (1044)
Q Consensus 142 ~~G~N~~~~~~~~---~~~~~~~~~~~~~~~~illv~a~lsl~~gi~~~g~~~~~~d~~~i~~~v~lv~~v~a~~~~~~~ 218 (1044)
.|..|.+...|-. -+++.+|+||+.+.++++++++++++++.+++.+ ..+.++|++++++++++.++.++
T Consensus 86 ~f~~N~i~TsKYt~~tFlP~~L~eQF~r~aN~YFL~I~ilq~ip~~s~~~-------~~t~~~PL~~vl~v~~ike~~Ed 158 (1178)
T PLN03190 86 EFAGNSIRTAKYSVFSFLPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFG-------RGASILPLAFVLLVTAVKDAYED 158 (1178)
T ss_pred cCCCCeeeccccccHHHHHHHHHHHHHhhhhHHHHHHHHHHhCCCcccCC-------cchHHHHHHHHHHHHHHHHHHHH
Confidence 5899999987632 2445689999999999999999999998876543 23567899999999999999999
Q ss_pred HHHHHhhcccCCceEEEEeCCeEEEEeecccccCcEEEeCCCCeeeccEEEEecCc----eeeecCCCCCCCCceeecCC
Q 001616 219 RQFDKLSKISNNIKVEVVREARRLQISIFDLVVGDIVFLKIGDQIPADGLFLDGHS----LQVDESSMTGESDHVEVDST 294 (1044)
Q Consensus 219 ~~~~~l~~~~~~~~v~ViR~G~~~~I~~~dLvvGDIV~l~~Gd~VPADgill~g~~----l~VDES~LTGEs~pv~k~~~ 294 (1044)
.++++.++..|+..++|+|+|.+++++|.||+|||+|.+++||+|||||+++++++ ++||||+|||||.|+.|.+.
T Consensus 159 ~~r~k~d~~~N~~~~~v~~~~~~~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~Ss~~~G~~~Vdts~LdGEt~~k~k~~~ 238 (1178)
T PLN03190 159 WRRHRSDRIENNRLAWVLVDDQFQEKKWKDIRVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTINLDGESNLKTRYAK 238 (1178)
T ss_pred HHHHHhHHhhcCcEEEEEECCeEEEEeHHHCCCCCEEEECCCCEeeeeEEEEeccCCCceEEEEccccCCeeeeeEeccc
Confidence 99999988888999999999999999999999999999999999999999998443 69999999999999988631
Q ss_pred -------------------------------------------CCceeeecceEee-CceEEEEEEecccchhHHHHhhc
Q 001616 295 -------------------------------------------NNPFLFSGSKVAD-GYAQMLVVSVGMNTAWGEMMSSI 330 (1044)
Q Consensus 295 -------------------------------------------~~~~l~sGt~v~~-G~~~~~V~~vG~~T~~gki~~~~ 330 (1044)
.+++++.||.+.. .++.++|++||.+| |++.+.
T Consensus 239 ~~~~~~~~~~~~~~~~i~~e~Pn~~l~~F~G~i~~~~~~~~l~~~n~llRG~~LrnT~~i~GvVVYTG~dT---K~~~N~ 315 (1178)
T PLN03190 239 QETLSKIPEKEKINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKNTAWAIGVAVYCGRET---KAMLNN 315 (1178)
T ss_pred chhhhcchhhhhceEEEEEeCCCccceeEEEEEEECCCcccCCccceeeccceecCCceEEEEEEEechhh---hHhhcC
Confidence 1234555555554 37999999999999 788877
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccccCCCC---------CCcchhHHHHHHH
Q 001616 331 SSDSNERTPLQARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSN---------TDIDDVFNAVVSI 401 (1044)
Q Consensus 331 ~~~~~~~tplq~~l~~la~~i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~ 401 (1044)
.....+.|++++++|++...+..+.+++|++++++... |.. ...+...+..|.... ..........+..
T Consensus 316 ~~~~~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~~-~~~-~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (1178)
T PLN03190 316 SGAPSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAV-WLR-RHRDELDTIPFYRRKDFSEGGPKNYNYYGWGWEIFFT 393 (1178)
T ss_pred CCCCCCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHh-hhc-cccccccccccccccccccccccccccchhhHHHHHH
Confidence 77778999999999999888877777666665554322 111 111100011121100 0000000011223
Q ss_pred HHHHHHHHHHHhcchhHHHHHHHHHHHHHhhcccc----------ceeccchhhhcccCeeEEeeCcccccccCceEEEE
Q 001616 402 VAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMTDQ----------AMVRKLPACETMGSATVICTDKTGTLTLNQMKVTK 471 (1044)
Q Consensus 402 ~~~ai~ilvvavP~gLplavtl~la~~~~~m~k~~----------~lvr~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~ 471 (1044)
|...+.++..+||++|+..++++....+..|.+|+ +.||+++.+|+||++++||||||||||+|+|++++
T Consensus 394 f~~~lil~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGTLT~N~M~fk~ 473 (1178)
T PLN03190 394 FLMSVIVFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQC 473 (1178)
T ss_pred HHHHHHHHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEEEcCCCccccceEEEEE
Confidence 34445566689999999999999977787887766 67999999999999999999999999999999999
Q ss_pred EEecccccccccc---------------------cc--C------------C-h--HHHHHHHHHHhhcCCccccccCCC
Q 001616 472 FWLGQESIVQETY---------------------CK--I------------A-S--SIRDLFHQGVGLNTTGSVSKLKPG 513 (1044)
Q Consensus 472 ~~~~~~~~~~~~~---------------------~~--~------------~-~--~~~~~l~~~i~~n~~~~~~~~~~~ 513 (1044)
+++++..|+.+.. .. . . + .....+..++++||+......++.
T Consensus 474 ~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~lalChtv~~~~~~~~ 553 (1178)
T PLN03190 474 ASIWGVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAKHVHDFFLALAACNTIVPIVVDDT 553 (1178)
T ss_pred EEECCEEcccccccchhhhhccccccccccccccccccCCHHHHhhhhccccchhhHHHHHHHHHHHhcCCceeeccCCC
Confidence 9998765532100 00 0 0 0 112234567788888765321111
Q ss_pred -C----CcceecCChhHHHHHHHHHHHcCC------------ChHHhhhcccEEEEecCCCCCceEEEEEEecCCCeEEE
Q 001616 514 -S----SVAEFSGSPTEKAVLSWAVLEMGM------------EMDKVKQKYSILHVETFNSEKKRSGVLIRRKADNTTHI 576 (1044)
Q Consensus 514 -~----~~~~~~gsp~e~All~~a~~~~g~------------~~~~~~~~~~il~~~pF~s~rkrmsvvv~~~~~~~~~~ 576 (1044)
+ ...+.++||+|.||+++|. ++|+ +....+.+|++++++||+|+||||||+++.+++. +.+
T Consensus 554 ~~~~~~~~~Y~a~SPdE~ALv~~a~-~~G~~l~~r~~~~i~i~~~~~~~~~~il~~~pF~S~rKrMSvIv~~~~~~-~~l 631 (1178)
T PLN03190 554 SDPTVKLMDYQGESPDEQALVYAAA-AYGFMLIERTSGHIVIDIHGERQRFNVLGLHEFDSDRKRMSVILGCPDKT-VKV 631 (1178)
T ss_pred CCccccceEEecCCCcHHHHHHHHH-HCCCeEecccCCeEEEeeccceecceeEEEecccccccEEEEEEEcCCCc-EEE
Confidence 1 1235666999999999998 8897 4445667899999999999999999999976654 889
Q ss_pred EecCcHHHHHHhcccccccCCeeecCChhhHHHHHHHHHHHHhcccceeeeeeeecCchhhcccc---------------
Q 001616 577 HWKGAAEIILAMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAYNN--------------- 641 (1044)
Q Consensus 577 ~~KGA~e~Il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~~A~k~l~~~~~~~~~--------------- 641 (1044)
|+|||||.|+++|++.. +++.++++++++++||++|||||++|||++++++.....
T Consensus 632 ~~KGA~e~il~~~~~~~---------~~~~~~~~~~~l~~~a~~GlRtL~lA~k~l~~~e~~~~~~~~~~a~~~~~~r~~ 702 (1178)
T PLN03190 632 FVKGADTSMFSVIDRSL---------NMNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTALIGRAA 702 (1178)
T ss_pred EEecCcHHHHHhhcccc---------cchhHHHHHHHHHHHHhcCCceEEEEEEeCCHHHHhhHHHHHHHhhhhhhhhHH
Confidence 99999999999998643 234577889999999999999999999999864322110
Q ss_pred hHHHhhhhcccCeEEEEEecccCCCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCcccccc-----------
Q 001616 642 DVKARQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQ----------- 710 (1044)
Q Consensus 642 ~~~~~~~~~e~~l~llG~vgi~D~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~~~~~----------- 710 (1044)
......+..|+||+++|+++++||+|+|++++|+.|++|||+|||+|||+.+||.+||++|||++++..
T Consensus 703 ~l~~~~~~iE~dL~~lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~~~i~i~~~~~~~ 782 (1178)
T PLN03190 703 LLRKVASNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIIINSNSKES 782 (1178)
T ss_pred HHHhhHHhhhcCcEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCCeeEEecCCchhh
Confidence 001112457899999999999999999999999999999999999999999999999999999876421
Q ss_pred ---------------------------------cccceeecchhhhcCCH----HHHHHHhcccc--EEeecChhhHHHH
Q 001616 711 ---------------------------------VEKGEVVEGVEFRNYTD----EERIQKVDKIR--VMARSSPFDKLLM 751 (1044)
Q Consensus 711 ---------------------------------~~~~~vi~g~~~~~~~~----~~~~~~~~~~~--V~ar~sP~~K~~l 751 (1044)
.+..++++|.++..+.+ +++.+...++. ||||+||+||.++
T Consensus 783 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~~~~~VI~cR~sP~QKa~I 862 (1178)
T PLN03190 783 CRKSLEDALVMSKKLTTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCCRVAPLQKAGI 862 (1178)
T ss_pred HHHHHHHHhhhhhhccccccccccccccccccCCceEEEEEcHHHHHHhhhHHHHHHHHHHHhCCEEEEecCCHHHHHHH
Confidence 01237899999988875 45666666665 7999999999999
Q ss_pred HHHHHhc-CCEEEEEcCCcCCHHHHhhCCcceeeCCCchH--HHhhccCEEEccCChhHHHHH-HHHhHHHHHhHHHHHH
Q 001616 752 VQCLKKK-GHVVAVTGDGTNDAPALKEADVGLSMGIQGTE--VAKESSDIVILDDDFTSVATV-LRWGRCVYTNIQKFIQ 827 (1044)
Q Consensus 752 V~~lq~~-g~vVa~~GDG~NDapaLk~AdVGiamg~~gt~--vAk~aaDivl~dd~f~~I~~~-i~~GR~~~~ni~k~i~ 827 (1044)
|+.+|+. +++|+|+|||+||+||||+||||| |++|+| +|+.+||+++. .|..+.++ +.|||+.|.|+.++++
T Consensus 863 V~~vk~~~~~vtlaIGDGaNDv~mIq~AdVGI--GIsG~EG~qA~~aSDfaI~--~Fr~L~rLLlvHGr~~y~R~s~~i~ 938 (1178)
T PLN03190 863 VALVKNRTSDMTLAIGDGANDVSMIQMADVGV--GISGQEGRQAVMASDFAMG--QFRFLVPLLLVHGHWNYQRMGYMIL 938 (1178)
T ss_pred HHHHHhcCCcEEEEECCCcchHHHHHhcCeee--eecCchhHHHHHhhccchh--hhHHHHHHHHHhCHHHHHHHHHHHH
Confidence 9999997 689999999999999999999999 667777 99999999998 68888888 5699999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCch---hHHHHHHHhhhhhHHHHHHhc-c--CCCCcccccCCCCC---CCCCcccHHH
Q 001616 828 FQLTVNVAALVINFIAAVSAGEVPL---TAVQLLWVNLIMDTLGALALA-T--DRPTDELMQRPPVG---RTEPLITNIM 898 (1044)
Q Consensus 828 f~l~~nv~~~~~~~~~~~~~~~~pl---~~~qlL~~nli~d~l~alala-~--e~p~~~lm~~~P~~---~~~~li~~~~ 898 (1044)
|.+++|++..+++|++.+++++++. ..+-+..+|++++.+|.+++| . +-|.+.+++.|-.+ ++...++...
T Consensus 939 y~fYKN~~~~~~qf~f~~~~~fSg~~ly~~~~~~~yN~~fTslPii~~~ifD~dv~~~~l~~~P~LY~~~~~~~~~n~~~ 1018 (1178)
T PLN03190 939 YNFYRNAVFVLVLFWYVLFTCFTLTTAINEWSSVLYSVIYTALPTIVVGILDKDLSRRTLLKYPQLYGAGQRQEAYNSKL 1018 (1178)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhCcHhhhhhccCCccCHHH
Confidence 9999999999999999998887765 567788999999999999997 3 55566667766554 4566788887
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 001616 899 WRNLLSQALYQITILLILQF 918 (1044)
Q Consensus 899 ~~~i~~~~~~q~~v~~~l~~ 918 (1044)
+..|++.++||.++++++.+
T Consensus 1019 F~~w~~~~i~qs~iiff~~~ 1038 (1178)
T PLN03190 1019 FWLTMIDTLWQSAVVFFVPL 1038 (1178)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 77889999999988876654
No 17
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=2.6e-94 Score=864.14 Aligned_cols=580 Identities=27% Similarity=0.367 Sum_probs=461.6
Q ss_pred HHhhhhHHHHHHHHHHHHHhhccccC--CCCc-cccchhHHHHHHHHHHHHhHHH----HHHHHHHHHHhhcccCCceEE
Q 001616 162 EAFKDTTILILLVCAALSLGFGIKEH--GAEE-GWYEGGSIFVAVFLVIVVSAFS----NFRQARQFDKLSKISNNIKVE 234 (1044)
Q Consensus 162 ~~~~~~~~~illv~a~lsl~~gi~~~--g~~~-~~~d~~~i~~~v~lv~~v~a~~----~~~~~~~~~~l~~~~~~~~v~ 234 (1044)
.+|++|+.++++++++++++++...+ +... .+++++.|++.+++.++++.+. +++.+++.++|.+...+.+++
T Consensus 28 ~~~~~p~~~il~~aa~ls~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~~a~ 107 (673)
T PRK14010 28 YMIKNPIMFVVEVGMLLALGLTIYPDLFHQESVSRLYVFSIFIILLLTLVFANFSEALAEGRGKAQANALRQTQTEMKAR 107 (673)
T ss_pred HHHHChHHHHHHHHHHHHHHHHHHhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEE
Confidence 46788999999999999999886532 1111 2367788888888888887777 566667777777665444565
Q ss_pred -EEeCCeEEEEeecccccCcEEEeCCCCeeeccEEEEecCceeeecCCCCCCCCceeecCC-CCceeeecceEeeCceEE
Q 001616 235 -VVREARRLQISIFDLVVGDIVFLKIGDQIPADGLFLDGHSLQVDESSMTGESDHVEVDST-NNPFLFSGSKVADGYAQM 312 (1044)
Q Consensus 235 -ViR~G~~~~I~~~dLvvGDIV~l~~Gd~VPADgill~g~~l~VDES~LTGEs~pv~k~~~-~~~~l~sGt~v~~G~~~~ 312 (1044)
|.|||++++|++++|+|||+|.+++||+|||||++++|+. .||||+|||||.|+.|.+. +.+.+|+||.+.+|++.+
T Consensus 108 ~v~rdg~~~~I~a~eLv~GDiV~v~~Gd~IPaDG~vieG~~-~VDESaLTGES~PV~K~~g~d~~~V~aGT~v~~G~~~i 186 (673)
T PRK14010 108 RIKQDGSYEMIDASDLKKGHIVRVATGEQIPNDGKVIKGLA-TVDESAITGESAPVIKESGGDFDNVIGGTSVASDWLEV 186 (673)
T ss_pred EEEeCCEEEEEEHHHcCCCCEEEECCCCcccCCeEEEEcce-EEecchhcCCCCceeccCCCccCeeecCceeecceEEE
Confidence 7899999999999999999999999999999999999976 9999999999999999853 115599999999999999
Q ss_pred EEEEecccchhHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccccCCCCCCcc
Q 001616 313 LVVSVGMNTAWGEMMSSISSDSNERTPLQARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDID 392 (1044)
Q Consensus 313 ~V~~vG~~T~~gki~~~~~~~~~~~tplq~~l~~la~~i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (1044)
+|+++|.+|++||+.+++.+.+.++||+|..+..+...+. +.++++++++..+.. +.
T Consensus 187 ~Vta~g~~T~lgki~~lve~a~~~ktp~e~~l~~l~~~l~-----ii~l~~~~~~~~~~~--~~---------------- 243 (673)
T PRK14010 187 EITSEPGHSFLDKMIGLVEGATRKKTPNEIALFTLLMTLT-----IIFLVVILTMYPLAK--FL---------------- 243 (673)
T ss_pred EEEEecccCHHHHHHHHHhhccccCCHHHHHHHHHHHHHh-----HHHHHHHHHHHHHHh--hc----------------
Confidence 9999999999999999999888899999987766543332 222222222111100 00
Q ss_pred hhHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhhccccceeccchhhhcccCeeEEeeCcccccccCceEEEEE
Q 001616 393 DVFNAVVSIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKF 472 (1044)
Q Consensus 393 ~~~~~~~~~~~~ai~ilvvavP~gLplavtl~la~~~~~m~k~~~lvr~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~~ 472 (1044)
.+...+..++++++++|||+||..++++++.+++||+|+|+++|+++++|+||++|+||||||||||+|++.++++
T Consensus 244 ----~~~~~~~~~val~V~~IP~aL~~~~~~~~~~g~~r~ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~ 319 (673)
T PRK14010 244 ----NFNLSIAMLIALAVCLIPTTIGGLLSAIGIAGMDRVTQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAF 319 (673)
T ss_pred ----cHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEEE
Confidence 1223456778888889999999999999999999999999999999999999999999999999999977777665
Q ss_pred EeccccccccccccCChHHHHHHHHHHhhcCCccccccCCCCCcceecCChhHHHHHHHHHHHcCCChHHhhhcccEEEE
Q 001616 473 WLGQESIVQETYCKIASSIRDLFHQGVGLNTTGSVSKLKPGSSVAEFSGSPTEKAVLSWAVLEMGMEMDKVKQKYSILHV 552 (1044)
Q Consensus 473 ~~~~~~~~~~~~~~~~~~~~~~l~~~i~~n~~~~~~~~~~~~~~~~~~gsp~e~All~~a~~~~g~~~~~~~~~~~il~~ 552 (1044)
...+. ....+++..+. .|+.+ +.||+++|+++++. +.+.+....+ .+.
T Consensus 320 ~~~~~-----------~~~~~ll~~a~-~~~~~--------------s~~P~~~AIv~~a~-~~~~~~~~~~-----~~~ 367 (673)
T PRK14010 320 IPVKS-----------SSFERLVKAAY-ESSIA--------------DDTPEGRSIVKLAY-KQHIDLPQEV-----GEY 367 (673)
T ss_pred EeCCC-----------ccHHHHHHHHH-HhcCC--------------CCChHHHHHHHHHH-HcCCCchhhh-----cce
Confidence 42111 11123333222 23211 24899999999987 6665533222 234
Q ss_pred ecCCCCCceEEEEEEecCCCeEEEEecCcHHHHHHhcccccccCCeeecCChhhHHHHHHHHHHHHhcccceeeeeeeec
Q 001616 553 ETFNSEKKRSGVLIRRKADNTTHIHWKGAAEIILAMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQV 632 (1044)
Q Consensus 553 ~pF~s~rkrmsvvv~~~~~~~~~~~~KGA~e~Il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~~A~k~l 632 (1044)
+||++++|+|++.++ ++ .+.|||+|.++++|+. +|...+ ..+++.+++++++|+|+++++.
T Consensus 368 ~pF~~~~k~~gv~~~---g~---~i~kGa~~~il~~~~~----~g~~~~------~~~~~~~~~~a~~G~~~l~v~~--- 428 (673)
T PRK14010 368 IPFTAETRMSGVKFT---TR---EVYKGAPNSMVKRVKE----AGGHIP------VDLDALVKGVSKKGGTPLVVLE--- 428 (673)
T ss_pred eccccccceeEEEEC---CE---EEEECCHHHHHHHhhh----cCCCCc------hHHHHHHHHHHhCCCeEEEEEE---
Confidence 799999999998753 32 4569999999999984 222111 2356677889999999998753
Q ss_pred CchhhcccchHHHhhhhcccCeEEEEEecccCCCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCcccccccc
Q 001616 633 SEEETAYNNDVKARQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVE 712 (1044)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~e~~l~llG~vgi~D~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~~~~~~~ 712 (1044)
|++++|+++++||+|||++++|++||++||+++|+||||..||.+||+++||..
T Consensus 429 --------------------~~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~~------ 482 (673)
T PRK14010 429 --------------------DNEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVDR------ 482 (673)
T ss_pred --------------------CCEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCce------
Confidence 468999999999999999999999999999999999999999999999999964
Q ss_pred cceeecchhhhcCCHHHHHHHhccccEEeecChhhHHHHHHHHHhcCCEEEEEcCCcCCHHHHhhCCcceeeCCCchHHH
Q 001616 713 KGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVA 792 (1044)
Q Consensus 713 ~~~vi~g~~~~~~~~~~~~~~~~~~~V~ar~sP~~K~~lV~~lq~~g~vVa~~GDG~NDapaLk~AdVGiamg~~gt~vA 792 (1044)
++||++|+||.++|+.+|++|++|+|||||+||||||++|||||||| +||++|
T Consensus 483 --------------------------v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMg-sGTdvA 535 (673)
T PRK14010 483 --------------------------FVAECKPEDKINVIREEQAKGHIVAMTGDGTNDAPALAEANVGLAMN-SGTMSA 535 (673)
T ss_pred --------------------------EEcCCCHHHHHHHHHHHHhCCCEEEEECCChhhHHHHHhCCEEEEeC-CCCHHH
Confidence 89999999999999999999999999999999999999999999999 899999
Q ss_pred hhccCEEEccCChhHHHHHHHHhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhc------------CCCchhHHH-HHH
Q 001616 793 KESSDIVILDDDFTSVATVLRWGRCVYTNIQKFIQFQLTVNVAALVINFIAAVSA------------GEVPLTAVQ-LLW 859 (1044)
Q Consensus 793 k~aaDivl~dd~f~~I~~~i~~GR~~~~ni~k~i~f~l~~nv~~~~~~~~~~~~~------------~~~pl~~~q-lL~ 859 (1044)
|++||+|++||||++|++++++||++|.|++|++.|.++.|+...+..+...+.. ..+|-+++- -+.
T Consensus 536 keAADiVLldd~ls~Iv~av~~gR~i~~n~~~~~~f~~~~~~~~~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 615 (673)
T PRK14010 536 KEAANLIDLDSNPTKLMEVVLIGKQLLMTRGSLTTFSIANDIAKYFAILPAMFMAAMPAMNHLNIMHLHSPESAVLSALI 615 (673)
T ss_pred HHhCCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHheeeeccHHHHHHHHHHHHHHhcccchhhccccCCChHHHHHHHHH
Confidence 9999999999999999999999999999999999999999997766555433321 246666553 223
Q ss_pred Hh-hhhhHHHHHHhc
Q 001616 860 VN-LIMDTLGALALA 873 (1044)
Q Consensus 860 ~n-li~d~l~alala 873 (1044)
+| +|.-.|..+||-
T Consensus 616 ~~~~~~~~~~~~~~~ 630 (673)
T PRK14010 616 FNALIIVLLIPIAMK 630 (673)
T ss_pred HHHHHHHHHHHHHhc
Confidence 34 444455556653
No 18
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.7e-94 Score=837.89 Aligned_cols=801 Identities=21% Similarity=0.312 Sum_probs=612.7
Q ss_pred CCCCCcCHHHHHHHHhhcCCCcCCCCCCCcHHHHHHHHhhhhHHHHHHHHHHHHHhhccccCCCCccccchhHHHHHHHH
Q 001616 126 EYGINGNDEDVSRRSQLFGANTYHKPPPKGLLHFVLEAFKDTTILILLVCAALSLGFGIKEHGAEEGWYEGGSIFVAVFL 205 (1044)
Q Consensus 126 ~~GL~~~~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~illv~a~lsl~~gi~~~g~~~~~~d~~~i~~~v~l 205 (1044)
..||+..+ +.+|+..||+|.+..+ -++.+.++.++.-+|+.++..++.++++.-+ ++|.+..|++.-..
T Consensus 158 ~~gL~~~~--~~~r~~iyG~N~i~l~-ik~i~~iLv~EvL~PfYlFQ~fSv~lW~~d~--------Y~~YA~cI~iisv~ 226 (1140)
T KOG0208|consen 158 SNGLERQE--IIDRRIIYGRNVISLP-IKSISQILVKEVLNPFYLFQAFSVALWLADS--------YYYYAFCIVIISVY 226 (1140)
T ss_pred cCCccHHH--HHhHHhhcCCceeeee-cccHHHHHHHhccchHHHHHhHHhhhhhccc--------chhhhhHHHHHHHH
Confidence 57998755 9999999999999987 5799999999999999998888877776443 35566666655555
Q ss_pred HHHHhHHHHHHHHHHHHHhhcccCCceEEEEeCCeEEEEeecccccCcEEEeCC-CCeeeccEEEEecCceeeecCCCCC
Q 001616 206 VIVVSAFSNFRQARQFDKLSKISNNIKVEVVREARRLQISIFDLVVGDIVFLKI-GDQIPADGLFLDGHSLQVDESSMTG 284 (1044)
Q Consensus 206 v~~v~a~~~~~~~~~~~~l~~~~~~~~v~ViR~G~~~~I~~~dLvvGDIV~l~~-Gd~VPADgill~g~~l~VDES~LTG 284 (1044)
.++++.+...+++++.+++-+. ...|+|+|||.+++|+++|||||||+.+.+ |-..|||++|++|++ .||||+|||
T Consensus 227 Si~~sv~e~r~qs~rlr~mv~~--~~~V~V~R~g~~~ti~S~eLVPGDil~i~~~~~~~PcDa~Li~g~c-ivNEsmLTG 303 (1140)
T KOG0208|consen 227 SIVLSVYETRKQSIRLRSMVKF--TCPVTVIRDGFWETVDSSELVPGDILYIPPPGKIMPCDALLISGDC-IVNESMLTG 303 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHhcC--CceEEEEECCEEEEEeccccccccEEEECCCCeEeecceEEEeCcE-EeecccccC
Confidence 5566666655666666666433 368999999999999999999999999998 999999999999986 899999999
Q ss_pred CCCceeecCC-----------------CCceeeecceEee------CceEEEEEEecccchhHHHHhhcCCCCCCCChhH
Q 001616 285 ESDHVEVDST-----------------NNPFLFSGSKVAD------GYAQMLVVSVGMNTAWGEMMSSISSDSNERTPLQ 341 (1044)
Q Consensus 285 Es~pv~k~~~-----------------~~~~l~sGt~v~~------G~~~~~V~~vG~~T~~gki~~~~~~~~~~~tplq 341 (1044)
||.|+.|.+. ..+++|+||++++ |.+.++|++||.+|..|++.+++..++.....+-
T Consensus 304 ESVPv~K~~l~~~~~~~~~~~~~~~~~~rh~lfcGT~vlq~r~~~g~~v~a~V~RTGF~T~KGqLVRsilyPkP~~fkfy 383 (1140)
T KOG0208|consen 304 ESVPVTKTPLPMGTDSLDSITISMSTNSRHTLFCGTKVLQARAYLGGPVLAMVLRTGFSTTKGQLVRSILYPKPVNFKFY 383 (1140)
T ss_pred CcccccccCCccccccCcCeeechhhcCcceeeccceEEEeecCCCCceEEEEEeccccccccHHHHhhcCCCCcccHHH
Confidence 9999999753 3468999999986 6789999999999999999999987765554444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccccCCCCCCcchhHHHHHHHHHHHHHHHHHHhcchhHHHH
Q 001616 342 ARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAAAVTIVVVAIPEGLPLAV 421 (1044)
Q Consensus 342 ~~l~~la~~i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~ilvvavP~gLplav 421 (1044)
+..-++. ....++|++.|+...+.+.... . .+-.+++.++.++.+.+|++||.++
T Consensus 384 rds~~fi----~~l~~ia~~gfiy~~i~l~~~g------~---------------~~~~iiirsLDliTi~VPPALPAal 438 (1140)
T KOG0208|consen 384 RDSFKFI----LFLVIIALIGFIYTAIVLNLLG------V---------------PLKTIIIRSLDLITIVVPPALPAAL 438 (1140)
T ss_pred HHHHHHH----HHHHHHHHHHHHHHhHhHHHcC------C---------------CHHHHhhhhhcEEEEecCCCchhhh
Confidence 4433332 2223344444444333222211 0 4456788999999999999999999
Q ss_pred HHHHHHHHHhhccccceeccchhhhcccCeeEEeeCcccccccCceEEEEEEecccccccc--------cc------ccC
Q 001616 422 TLTLAYSMKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKFWLGQESIVQE--------TY------CKI 487 (1044)
Q Consensus 422 tl~la~~~~~m~k~~~lvr~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~--------~~------~~~ 487 (1044)
++...++.+|+.|+|+.+-+++.+...|+++++|||||||||++.+.+-.+..-....... .. ...
T Consensus 439 tvG~~~a~~RLkkk~IfCisP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 518 (1140)
T KOG0208|consen 439 TVGIIYAQSRLKKKGIFCISPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPVERNVDDGPELKVVTEDSLQLFYKLSL 518 (1140)
T ss_pred hHHHHHHHHHHHhcCeEEcCccceeecceeeEEEEcCCCcccccceeEEEEEeccccccccchhhhhhhhhccceeeccc
Confidence 9999999999999999999999999999999999999999999999998887633221100 00 000
Q ss_pred Ch--HHHHHHHHHHhhcCCccccccCCCCCcceecCChhHHHHHHHHHHHcCC----C---------------h-----H
Q 001616 488 AS--SIRDLFHQGVGLNTTGSVSKLKPGSSVAEFSGSPTEKAVLSWAVLEMGM----E---------------M-----D 541 (1044)
Q Consensus 488 ~~--~~~~~l~~~i~~n~~~~~~~~~~~~~~~~~~gsp~e~All~~a~~~~g~----~---------------~-----~ 541 (1044)
.. .....+..+++.||+-... .....|+|.|.-+.+...+.+.. + . +
T Consensus 519 ~~~~~~~~~~~~a~atCHSL~~v-------~g~l~GDPLdlkmfe~t~w~~ee~~~~~~~~~~~~~~~p~v~~p~~~~~~ 591 (1140)
T KOG0208|consen 519 RSSSLPMGNLVAAMATCHSLTLV-------DGTLVGDPLDLKMFESTGWVYEEADIEDEATREFNTLIPTVVRPPENAFN 591 (1140)
T ss_pred cccCCchHHHHHHHhhhceeEEe-------CCeeccCceeeeeeeccceEEEeccccchhhhhhCCccCCEeCCCccccc
Confidence 00 0123455566667643322 12456777777666543322200 0 0 0
Q ss_pred Hh----hhcccEEEEecCCCCCceEEEEEEecCCCeEEEEecCcHHHHHHhcccccccCCeeecCChhhHHHHHHHHHHH
Q 001616 542 KV----KQKYSILHVETFNSEKKRSGVLIRRKADNTTHIHWKGAAEIILAMCSHYYESNGVIKSMDGNGRSQMENIIHGM 617 (1044)
Q Consensus 542 ~~----~~~~~il~~~pF~s~rkrmsvvv~~~~~~~~~~~~KGA~e~Il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~ 617 (1044)
.- ...+.+++.+||+|+-+||||+++.++.++..+|+|||||.|.+.|.+. .....+++.++.|
T Consensus 592 ~~t~~~~~~~si~k~feF~S~LrRMSVIv~~~~e~~~~~ftKGaPE~I~~ic~p~------------tvP~dy~evl~~Y 659 (1140)
T KOG0208|consen 592 QSTECGEGEISIVKQFEFSSALRRMSVIVSTGGEDKMMVFTKGAPESIAEICKPE------------TVPADYQEVLKEY 659 (1140)
T ss_pred CCCcCCCcceEEEEecccchhhheEEEEEecCCCCceEeeccCCHHHHHHhcCcc------------cCCccHHHHHHHH
Confidence 00 0147899999999999999999999877789999999999999999852 3456789999999
Q ss_pred HhcccceeeeeeeecCchhhcccchHHHhhhhcccCeEEEEEecccCCCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHH
Q 001616 618 AASSLRCIAFAYKQVSEEETAYNNDVKARQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKA 697 (1044)
Q Consensus 618 a~~glR~l~~A~k~l~~~~~~~~~~~~~~~~~~e~~l~llG~vgi~D~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~a 697 (1044)
+.+|+|++|+|+|+++.. ...+.....++..|+||+|+|++.|++++|++.+.+|++|++|.|+++|+||||..||..
T Consensus 660 t~~GfRVIAlA~K~L~~~--~~~~~~~~~Rd~vEs~l~FlGLiVmeNkLK~~T~~VI~eL~~AnIRtVMcTGDNllTais 737 (1140)
T KOG0208|consen 660 THQGFRVIALASKELETS--TLQKAQKLSRDTVESNLEFLGLIVMENKLKEETKRVIDELNRANIRTVMCTGDNLLTAIS 737 (1140)
T ss_pred HhCCeEEEEEecCccCcc--hHHHHhhccHhhhhccceeeEEEEeecccccccHHHHHHHHhhcceEEEEcCCchheeee
Confidence 999999999999999743 111222345778999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCccccccc--------------------------------------------------ccceeecchhhhcCC-
Q 001616 698 IATECGILRLDQQV--------------------------------------------------EKGEVVEGVEFRNYT- 726 (1044)
Q Consensus 698 IA~~~GI~~~~~~~--------------------------------------------------~~~~vi~g~~~~~~~- 726 (1044)
+||+||++.+.... +...+++|+.|+-+.
T Consensus 738 VakeCgmi~p~~~v~~~~~~~~~~~~~~~i~w~~ve~~~~~~~~~~~~~~~~~~~~~~d~~~~~~yhlA~sG~~f~~i~~ 817 (1140)
T KOG0208|consen 738 VAKECGMIEPQVKVIIPELEPPEDDSIAQIVWLCVESQTQFLDPKEPDPDLASVKLSLDVLSEKDYHLAMSGKTFQVILE 817 (1140)
T ss_pred hhhcccccCCCCeEEEEeccCCccCCCceeEEEEccCccccCCCCccCccccCCccChhhhccceeEEEecCchhHHHHh
Confidence 99999999754210 245678899887654
Q ss_pred --HHHHHHHhccccEEeecChhhHHHHHHHHHhcCCEEEEEcCCcCCHHHHhhCCcceeeCCCchHHHhhccCEEEccCC
Q 001616 727 --DEERIQKVDKIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDD 804 (1044)
Q Consensus 727 --~~~~~~~~~~~~V~ar~sP~~K~~lV~~lq~~g~vVa~~GDG~NDapaLk~AdVGiamg~~gt~vAk~aaDivl~dd~ 804 (1044)
.+.+..++.+..|||||+|.||.++|+.||+.|+.|+|+|||+||+.|||+|||||+++.++ |.-||.+.-.-.+
T Consensus 818 ~~~~l~~~Il~~~~VfARMsP~qK~~Lie~lQkl~y~VgfCGDGANDCgALKaAdvGISLSeaE---ASvAApFTSk~~~ 894 (1140)
T KOG0208|consen 818 HFPELVPKILLKGTVFARMSPDQKAELIEALQKLGYKVGFCGDGANDCGALKAADVGISLSEAE---ASVAAPFTSKTPS 894 (1140)
T ss_pred hcHHHHHHHHhcCeEEeecCchhHHHHHHHHHhcCcEEEecCCCcchhhhhhhcccCcchhhhh---HhhcCccccCCCc
Confidence 56788888999999999999999999999999999999999999999999999999997543 4556888887789
Q ss_pred hhHHHHHHHHhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHhhhhhHHHHHHhccCCCCcccccC
Q 001616 805 FTSVATVLRWGRCVYTNIQKFIQFQLTVNVAALVINFIAAVSAGEVPLTAVQLLWVNLIMDTLGALALATDRPTDELMQR 884 (1044)
Q Consensus 805 f~~I~~~i~~GR~~~~ni~k~i~f~l~~nv~~~~~~~~~~~~~~~~pl~~~qlL~~nli~d~l~alala~e~p~~~lm~~ 884 (1044)
.+++.++|++||+....-...++|...|.++..+..+ .++....-++..|.|+++++..++.|++++..+|.+.|-..
T Consensus 895 I~cVp~vIrEGRaALVTSf~~FkYMalYs~iqFisv~--~LY~~~~nl~D~Qfl~iDLlii~pia~~m~~~~a~~~L~~~ 972 (1140)
T KOG0208|consen 895 ISCVPDVIREGRAALVTSFACFKYMALYSAIQFISVV--FLYLINSNLGDLQFLFIDLLIITPIAVMMSRFDASDKLFPK 972 (1140)
T ss_pred hhhHhHHHhhhhhhhhhhHHHHHHHHHHHHHHHHhhh--eeeeecccccchhhhhhHHHHHHHHHHHHccCcHHHHhcCC
Confidence 9999999999999999988888888777665433222 23445677999999999999999999999999999999888
Q ss_pred CCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHhcc--cccCC--------CcccccchhhhHHHHHHHHHHhhhcccc
Q 001616 885 PPVGRTEPLITNIMWRNLLSQALYQITILLILQFKGE--SIFNV--------SPEVNDTLIFNTFVFCQVFNEFNARKLE 954 (1044)
Q Consensus 885 ~P~~~~~~li~~~~~~~i~~~~~~q~~v~~~l~~~~~--~~~~~--------~~~~~~t~~f~~~v~~q~fn~~n~r~~~ 954 (1044)
||. ..|+++.....+++|.++..++.+..++... .|+.. .....+|.+|..-.|..+|+.+ .+.
T Consensus 973 rP~---~~L~s~~~~~~l~~q~vli~l~q~i~~l~~~~qpw~~pp~~~~~~nt~s~~~T~lF~vS~fqYi~~a~---v~S 1046 (1140)
T KOG0208|consen 973 RPP---TNLLSKKILVPLLLQIVLICLVQWILTLIVEPQPWYEPPNPQVDDNTQSSDNTSLFFVSSFQYIFIAL---VLS 1046 (1140)
T ss_pred CCC---ccccccchhhhhHHHHHHHHHHHHhhheeeccccceecCCCCcCcccccceeeEeeehhHHHHHHhhe---eec
Confidence 874 4589998888888888887777666654433 34332 1344567777655555555543 344
Q ss_pred ccccc-ccccccHHHHHHHHHHHHHHHHHH--H--H-hhHhhccCCCCh
Q 001616 955 KRNVF-KGIHKNKLFLGIIGITVVLQVVMV--E--F-LKKFADTERLNW 997 (1044)
Q Consensus 955 ~~~~f-~~~~~n~~f~~~i~~~~~~qv~~v--~--~-~~~~f~~~~l~~ 997 (1044)
+.+.| +.+|+|+.|...+......-+.++ . + ..+.++.++.+-
T Consensus 1047 ~g~pfr~pl~~n~~f~~~i~~i~~~~i~l~~~~~~~~~~~l~~~t~~~~ 1095 (1140)
T KOG0208|consen 1047 KGSPFRRPLWKNVLFKVFITVIILSTIYLLFVNYLFIEWKLLQLTYIPT 1095 (1140)
T ss_pred cCCcccCchhcCceeeeehhhHHhhhhhhhhccccchhhhhhceeccCc
Confidence 44445 488999988765544443333222 1 1 124566666655
No 19
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=4.7e-93 Score=854.06 Aligned_cols=584 Identities=25% Similarity=0.357 Sum_probs=466.7
Q ss_pred HHHhhhhHHHHHHHHHHHHHhhccccC---C---CCccccchhHHHHHHHHHHHHhHHHHHHHHHHHHHhhcccCCceEE
Q 001616 161 LEAFKDTTILILLVCAALSLGFGIKEH---G---AEEGWYEGGSIFVAVFLVIVVSAFSNFRQARQFDKLSKISNNIKVE 234 (1044)
Q Consensus 161 ~~~~~~~~~~illv~a~lsl~~gi~~~---g---~~~~~~d~~~i~~~v~lv~~v~a~~~~~~~~~~~~l~~~~~~~~v~ 234 (1044)
..+|++|+.+++++++++|+++++.+. + +..+|..++.+++.+++..+++++.+++.+++.++|.+...+..++
T Consensus 28 ~~~~~~p~~~vl~~~a~ls~~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~~~~a~ 107 (679)
T PRK01122 28 RVQIRNPVMFVVEVGSILTTILTIAPLLFQSGGPAGFNLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKKDTFAR 107 (679)
T ss_pred HHHhhChHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeEE
Confidence 358899999999999999999986432 1 1134444555556666666777788899999999998775555799
Q ss_pred EEeCCe-EEEEeecccccCcEEEeCCCCeeeccEEEEecCceeeecCCCCCCCCceeecCC-CCceeeecceEeeCceEE
Q 001616 235 VVREAR-RLQISIFDLVVGDIVFLKIGDQIPADGLFLDGHSLQVDESSMTGESDHVEVDST-NNPFLFSGSKVADGYAQM 312 (1044)
Q Consensus 235 ViR~G~-~~~I~~~dLvvGDIV~l~~Gd~VPADgill~g~~l~VDES~LTGEs~pv~k~~~-~~~~l~sGt~v~~G~~~~ 312 (1044)
|+|||+ +++|+++||++||+|.+++||+|||||++++|.. .||||+|||||.|+.|.+. ..+.+|+||.+.+|++.+
T Consensus 108 vir~g~~~~~V~~~eL~~GDiV~v~~Gd~IPaDG~vieG~a-~VDESaLTGES~PV~K~~G~~~~~V~aGT~v~~G~~~i 186 (679)
T PRK01122 108 KLREPGAAEEVPATELRKGDIVLVEAGEIIPADGEVIEGVA-SVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWIVI 186 (679)
T ss_pred EEECCCEEEEEEHHHcCCCCEEEEcCCCEEEEEEEEEEccE-EEEcccccCCCCceEeCCCCccCeEEeceEEEeeeEEE
Confidence 999988 8999999999999999999999999999999974 9999999999999999853 224599999999999999
Q ss_pred EEEEecccchhHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccccCCCCCCcc
Q 001616 313 LVVSVGMNTAWGEMMSSISSDSNERTPLQARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDID 392 (1044)
Q Consensus 313 ~V~~vG~~T~~gki~~~~~~~~~~~tplq~~l~~la~~i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (1044)
.|+++|.+|++||+.+++++.+.++||+|..++.+...+..+.+++++.++. ..++.+.
T Consensus 187 ~Vta~g~~S~lgki~~lve~a~~~ktp~e~al~~l~~~l~~i~l~~~~~~~~---~~~~~g~------------------ 245 (679)
T PRK01122 187 RITANPGESFLDRMIALVEGAKRQKTPNEIALTILLAGLTIIFLLVVATLPP---FAAYSGG------------------ 245 (679)
T ss_pred EEEEecccCHHHHHHHHHHhccccCCHHHHHHHHHHHhhhHHHHHHHHHHHH---HHHHhCc------------------
Confidence 9999999999999999999888889999998888766554333222111111 1111110
Q ss_pred hhHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhhccccceeccchhhhcccCeeEEeeCcccccccCceEEEEE
Q 001616 393 DVFNAVVSIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKF 472 (1044)
Q Consensus 393 ~~~~~~~~~~~~ai~ilvvavP~gLplavtl~la~~~~~m~k~~~lvr~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~~ 472 (1044)
.+ .+..++++++++|||+|+.+.++....+++||+|+|+++|+++++|+||++|+||||||||||+|+|+++++
T Consensus 246 ----~~--~l~~~iallV~aiP~alg~l~~~i~i~g~~r~ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~ 319 (679)
T PRK01122 246 ----AL--SITVLVALLVCLIPTTIGGLLSAIGIAGMDRVLQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEF 319 (679)
T ss_pred ----hH--HHHHHHHHHHHcccchhhhHHHHHHHHHHHHHhcCCeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEE
Confidence 11 567789999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred EeccccccccccccCChHHHHHHHHHHhhcCCccccccCCCCCcceecCChhHHHHHHHHHHHcCCChHHhhhcccEEEE
Q 001616 473 WLGQESIVQETYCKIASSIRDLFHQGVGLNTTGSVSKLKPGSSVAEFSGSPTEKAVLSWAVLEMGMEMDKVKQKYSILHV 552 (1044)
Q Consensus 473 ~~~~~~~~~~~~~~~~~~~~~~l~~~i~~n~~~~~~~~~~~~~~~~~~gsp~e~All~~a~~~~g~~~~~~~~~~~il~~ 552 (1044)
+..+. .++ .+ +....++++.+ ..||..+|+++++....+.+.. +..++..+.
T Consensus 320 ~~~~~---------~~~--~~-ll~~a~~~s~~--------------s~hP~~~AIv~~a~~~~~~~~~--~~~~~~~~~ 371 (679)
T PRK01122 320 LPVPG---------VTE--EE-LADAAQLSSLA--------------DETPEGRSIVVLAKQRFNLRER--DLQSLHATF 371 (679)
T ss_pred EeCCC---------CCH--HH-HHHHHHHhcCC--------------CCCchHHHHHHHHHhhcCCCch--hhcccccee
Confidence 75321 111 12 22333333321 2368899999998732444322 223566788
Q ss_pred ecCCCCCceEEEEEEecCCCeEEEEecCcHHHHHHhcccccccCCeeecCChhhHHHHHHHHHHHHhcccceeeeeeeec
Q 001616 553 ETFNSEKKRSGVLIRRKADNTTHIHWKGAAEIILAMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQV 632 (1044)
Q Consensus 553 ~pF~s~rkrmsvvv~~~~~~~~~~~~KGA~e~Il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~~A~k~l 632 (1044)
+||++.+|+|++.+. + +.++|||+|.+++.|.. +|. +..+++++.+++++++|+|++++|+
T Consensus 372 ~pF~s~~~~~gv~~~---g---~~~~kGa~e~il~~~~~----~g~------~~~~~~~~~~~~~a~~G~~~l~va~--- 432 (679)
T PRK01122 372 VPFSAQTRMSGVDLD---G---REIRKGAVDAIRRYVES----NGG------HFPAELDAAVDEVARKGGTPLVVAE--- 432 (679)
T ss_pred EeecCcCceEEEEEC---C---EEEEECCHHHHHHHHHh----cCC------cChHHHHHHHHHHHhCCCcEEEEEE---
Confidence 999999999998652 3 46899999999999963 222 1235677888999999999999996
Q ss_pred CchhhcccchHHHhhhhcccCeEEEEEecccCCCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCcccccccc
Q 001616 633 SEEETAYNNDVKARQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVE 712 (1044)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~e~~l~llG~vgi~D~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~~~~~~~ 712 (1044)
|++++|+++++||+|||++++|++||++||+++|+||||+.||.+||++|||.+
T Consensus 433 --------------------~~~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId~------ 486 (679)
T PRK01122 433 --------------------DNRVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDD------ 486 (679)
T ss_pred --------------------CCeEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcE------
Confidence 458999999999999999999999999999999999999999999999999964
Q ss_pred cceeecchhhhcCCHHHHHHHhccccEEeecChhhHHHHHHHHHhcCCEEEEEcCCcCCHHHHhhCCcceeeCCCchHHH
Q 001616 713 KGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVA 792 (1044)
Q Consensus 713 ~~~vi~g~~~~~~~~~~~~~~~~~~~V~ar~sP~~K~~lV~~lq~~g~vVa~~GDG~NDapaLk~AdVGiamg~~gt~vA 792 (1044)
++||++|+||.++|+.+|++|++|||||||+||+|||++|||||||| +||++|
T Consensus 487 --------------------------v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMg-sGTdvA 539 (679)
T PRK01122 487 --------------------------FLAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMN-SGTQAA 539 (679)
T ss_pred --------------------------EEccCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEEeC-CCCHHH
Confidence 89999999999999999999999999999999999999999999999 999999
Q ss_pred hhccCEEEccCChhHHHHHHHHhHHHHHhHHHHHHHHHHHHHHH----HHHHHHHHHhc---------CCCchhHHH-HH
Q 001616 793 KESSDIVILDDDFTSVATVLRWGRCVYTNIQKFIQFQLTVNVAA----LVINFIAAVSA---------GEVPLTAVQ-LL 858 (1044)
Q Consensus 793 k~aaDivl~dd~f~~I~~~i~~GR~~~~ni~k~i~f~l~~nv~~----~~~~~~~~~~~---------~~~pl~~~q-lL 858 (1044)
||+||+|++||||++|+++++|||+..-.--..-.|++. |-++ ++..++.+.+- ..+|-+++- -+
T Consensus 540 keAADiVLldd~~s~Iv~av~~GR~~~~tr~~~~~f~~~-n~~~~~~~i~p~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 618 (679)
T PRK01122 540 KEAGNMVDLDSNPTKLIEVVEIGKQLLMTRGALTTFSIA-NDVAKYFAIIPAMFAATYPQLNALNIMHLHSPQSAILSAL 618 (679)
T ss_pred HHhCCEEEeCCCHHHHHHHHHHHHHHHhhhHhhhhhhHH-HHHHHHHHHHHHHHHhhCccccccccccCCChHHHHHHHH
Confidence 999999999999999999999999999766666778876 5443 33333333222 245666553 22
Q ss_pred HHh-hhhhHHHHHHhc
Q 001616 859 WVN-LIMDTLGALALA 873 (1044)
Q Consensus 859 ~~n-li~d~l~alala 873 (1044)
.+| +|.-.|..+||-
T Consensus 619 ~~~~~~~~~~~~~~~~ 634 (679)
T PRK01122 619 IFNALIIVALIPLALK 634 (679)
T ss_pred HHHHHHHHHhHHHHhc
Confidence 334 444455556653
No 20
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=100.00 E-value=6.6e-89 Score=816.20 Aligned_cols=546 Identities=25% Similarity=0.374 Sum_probs=450.8
Q ss_pred HHhhhhHHHHHHHHHHHHHhhcccc--C---CCCccccch---hHHHHHHHHHHHHhHHHHHHHHHHHHHhhcccCCceE
Q 001616 162 EAFKDTTILILLVCAALSLGFGIKE--H---GAEEGWYEG---GSIFVAVFLVIVVSAFSNFRQARQFDKLSKISNNIKV 233 (1044)
Q Consensus 162 ~~~~~~~~~illv~a~lsl~~gi~~--~---g~~~~~~d~---~~i~~~v~lv~~v~a~~~~~~~~~~~~l~~~~~~~~v 233 (1044)
.||+||+.+++++++++|+++++.+ . +...+|+++ +.+++.+++..+++++.+++.++++++|.+...+..+
T Consensus 28 ~~~~~p~~~il~~~a~is~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~g~~~e~~ae~ra~~~~~~L~~~~~~~~a 107 (675)
T TIGR01497 28 AQWRNPVMFIVWVGSLLTTCITIAPASFGMPGNNLALFNAIITGILFITVLFANFAEAVAEGRGKAQADSLKGTKKTTFA 107 (675)
T ss_pred HHhhChHHHHHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCceE
Confidence 4789999999999999999987642 1 122358875 4455566777788889999999999999877655568
Q ss_pred EEEe-CCeEEEEeecccccCcEEEeCCCCeeeccEEEEecCceeeecCCCCCCCCceeecCCCC-ceeeecceEeeCceE
Q 001616 234 EVVR-EARRLQISIFDLVVGDIVFLKIGDQIPADGLFLDGHSLQVDESSMTGESDHVEVDSTNN-PFLFSGSKVADGYAQ 311 (1044)
Q Consensus 234 ~ViR-~G~~~~I~~~dLvvGDIV~l~~Gd~VPADgill~g~~l~VDES~LTGEs~pv~k~~~~~-~~l~sGt~v~~G~~~ 311 (1044)
+|+| ||++++|+++||+|||+|.+++||+|||||++++|+ +.||||+|||||.|+.|.+... +.+|+||.+.+|++.
T Consensus 108 ~vlr~dg~~~~V~~~~L~~GDiV~V~~Gd~IPaDG~vieG~-~~VDESaLTGES~PV~K~~g~~~~~V~aGT~v~~G~~~ 186 (675)
T TIGR01497 108 KLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIEGV-ASVDESAITGESAPVIKESGGDFASVTGGTRILSDWLV 186 (675)
T ss_pred EEEeeCCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEcc-EEEEcccccCCCCceeecCCCCcceeecCcEEEeeEEE
Confidence 8886 899999999999999999999999999999999996 5999999999999999985332 249999999999999
Q ss_pred EEEEEecccchhHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccccCCCCCCc
Q 001616 312 MLVVSVGMNTAWGEMMSSISSDSNERTPLQARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDI 391 (1044)
Q Consensus 312 ~~V~~vG~~T~~gki~~~~~~~~~~~tplq~~l~~la~~i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (1044)
++|+++|.+|++||+++++.+.+.++||+|..++.+...+..+.++ +++.++....+.+
T Consensus 187 i~Vt~~g~~S~lgri~~lve~a~~~ktplq~~l~~l~~~l~~v~li---~~~~~~~~~~~~~------------------ 245 (675)
T TIGR01497 187 VECTANPGETFLDRMIALVEGAQRRKTPNEIALTILLIALTLVFLL---VTATLWPFAAYGG------------------ 245 (675)
T ss_pred EEEEEecccCHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHH---HHHHHHHHHHhcC------------------
Confidence 9999999999999999999888888999999888876554322221 1122211110100
Q ss_pred chhHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhhccccceeccchhhhcccCeeEEeeCcccccccCceEEEE
Q 001616 392 DDVFNAVVSIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTK 471 (1044)
Q Consensus 392 ~~~~~~~~~~~~~ai~ilvvavP~gLplavtl~la~~~~~m~k~~~lvr~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~ 471 (1044)
. ...+..++++++++|||+|+...+.....+++||+++|+++|++.++|+||++|+||||||||||+|+|++++
T Consensus 246 -----~-~~~~~~lvallV~aiP~aLg~l~~av~iag~~r~ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~ 319 (675)
T TIGR01497 246 -----N-AISVTVLVALLVCLIPTTIGGLLSAIGIAGMDRVLGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASE 319 (675)
T ss_pred -----h-hHHHHHHHHHHHHhCchhhhhHHHHHHHHHHHHHHHCCeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEE
Confidence 0 1135667889999999988777777777899999999999999999999999999999999999999999999
Q ss_pred EEeccccccccccccCChHHHHHHHHHHhhcCCccccccCCCCCcceecCChhHHHHHHHHHHHcCCChHHhhhcccEEE
Q 001616 472 FWLGQESIVQETYCKIASSIRDLFHQGVGLNTTGSVSKLKPGSSVAEFSGSPTEKAVLSWAVLEMGMEMDKVKQKYSILH 551 (1044)
Q Consensus 472 ~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~n~~~~~~~~~~~~~~~~~~gsp~e~All~~a~~~~g~~~~~~~~~~~il~ 551 (1044)
++..+.. +. .+++ ..+++++. ...||.++|+++++. +.|.+... ..++..+
T Consensus 320 ~~~~~~~---------~~--~~ll-~~aa~~~~--------------~s~hP~a~Aiv~~a~-~~~~~~~~--~~~~~~~ 370 (675)
T TIGR01497 320 FIPAQGV---------DE--KTLA-DAAQLASL--------------ADDTPEGKSIVILAK-QLGIREDD--VQSLHAT 370 (675)
T ss_pred EEecCCC---------cH--HHHH-HHHHHhcC--------------CCCCcHHHHHHHHHH-HcCCCccc--cccccce
Confidence 8753211 11 1222 23333321 135799999999998 66655432 1234567
Q ss_pred EecCCCCCceEEEEEEecCCCeEEEEecCcHHHHHHhcccccccCCeeecCChhhHHHHHHHHHHHHhcccceeeeeeee
Q 001616 552 VETFNSEKKRSGVLIRRKADNTTHIHWKGAAEIILAMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQ 631 (1044)
Q Consensus 552 ~~pF~s~rkrmsvvv~~~~~~~~~~~~KGA~e~Il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~~A~k~ 631 (1044)
..||++.+|+|++.+. +| +.++|||+|.+++.|.. +|.. ....+++.+++++++|+|++++|+
T Consensus 371 ~~pf~~~~~~sg~~~~--~g---~~~~kGa~e~i~~~~~~----~g~~------~~~~~~~~~~~~a~~G~r~l~va~-- 433 (675)
T TIGR01497 371 FVEFTAQTRMSGINLD--NG---RMIRKGAVDAIKRHVEA----NGGH------IPTDLDQAVDQVARQGGTPLVVCE-- 433 (675)
T ss_pred EEEEcCCCcEEEEEEe--CC---eEEEECCHHHHHHHHHh----cCCC------CcHHHHHHHHHHHhCCCeEEEEEE--
Confidence 8999999888887543 33 46899999999998862 2221 124577888999999999999997
Q ss_pred cCchhhcccchHHHhhhhcccCeEEEEEecccCCCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCccccccc
Q 001616 632 VSEEETAYNNDVKARQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQV 711 (1044)
Q Consensus 632 l~~~~~~~~~~~~~~~~~~e~~l~llG~vgi~D~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~~~~~~ 711 (1044)
+.+++|+++++||+|||++++|++||++||+++|+||||..||.++|+++||.+
T Consensus 434 ---------------------~~~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~~----- 487 (675)
T TIGR01497 434 ---------------------DNRIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVDD----- 487 (675)
T ss_pred ---------------------CCEEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCE-----
Confidence 247999999999999999999999999999999999999999999999999964
Q ss_pred ccceeecchhhhcCCHHHHHHHhccccEEeecChhhHHHHHHHHHhcCCEEEEEcCCcCCHHHHhhCCcceeeCCCchHH
Q 001616 712 EKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEV 791 (1044)
Q Consensus 712 ~~~~vi~g~~~~~~~~~~~~~~~~~~~V~ar~sP~~K~~lV~~lq~~g~vVa~~GDG~NDapaLk~AdVGiamg~~gt~v 791 (1044)
++||++|+||..+|+.+|++|+.|+|+|||+||+|||++|||||||| +|+++
T Consensus 488 ---------------------------v~a~~~PedK~~~v~~lq~~g~~VamvGDG~NDapAL~~AdvGiAm~-~gt~~ 539 (675)
T TIGR01497 488 ---------------------------FIAEATPEDKIALIRQEQAEGKLVAMTGDGTNDAPALAQADVGVAMN-SGTQA 539 (675)
T ss_pred ---------------------------EEcCCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEEeC-CCCHH
Confidence 79999999999999999999999999999999999999999999999 89999
Q ss_pred HhhccCEEEccCChhHHHHHHHHhHHHHHhHHHHHHHHHHHHHH
Q 001616 792 AKESSDIVILDDDFTSVATVLRWGRCVYTNIQKFIQFQLTVNVA 835 (1044)
Q Consensus 792 Ak~aaDivl~dd~f~~I~~~i~~GR~~~~ni~k~i~f~l~~nv~ 835 (1044)
|+++||++++||||++|+++++|||+++-+......|++.-++.
T Consensus 540 akeaadivLldd~~s~Iv~av~~GR~~~~t~~~~~t~~~~~~~~ 583 (675)
T TIGR01497 540 AKEAANMVDLDSDPTKLIEVVHIGKQLLITRGALTTFSIANDVA 583 (675)
T ss_pred HHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHheeeecccHH
Confidence 99999999999999999999999999999999999999886664
No 21
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=100.00 E-value=6.5e-89 Score=834.93 Aligned_cols=852 Identities=22% Similarity=0.277 Sum_probs=638.5
Q ss_pred HHhhcCCCcCCCCCC---CcHHHHHHHHhhhhHHHHHHHHHHHHHhhccccCCCCccccchhHHHHHHHHHHHHhHHHHH
Q 001616 139 RSQLFGANTYHKPPP---KGLLHFVLEAFKDTTILILLVCAALSLGFGIKEHGAEEGWYEGGSIFVAVFLVIVVSAFSNF 215 (1044)
Q Consensus 139 r~~~~G~N~~~~~~~---~~~~~~~~~~~~~~~~~illv~a~lsl~~gi~~~g~~~~~~d~~~i~~~v~lv~~v~a~~~~ 215 (1044)
++..|-.|.+...|- .-+.+.+++||++..|++|++.+++++++ +++.++ .+.++++++++.+++++|.
T Consensus 28 ~~~~~~~N~i~TtKYt~~tFlPk~l~eQf~r~aN~yFl~~~il~~ip-~~~~~~-------~~~~~pl~~vl~~t~iKd~ 99 (1151)
T KOG0206|consen 28 PQRKYCDNRISTTKYTLFTFLPKNLFEQFHRVANLYFLFIAILQFIP-LSPFNP-------YTTLVPLLFVLGITAIKDA 99 (1151)
T ss_pred hhccccCCeeEEEeccchhhhHHHHHHHHHHHHHHHHHHHHHHHcCc-ccccCc-------cceeeceeeeehHHHHHHH
Confidence 455788899987653 23567899999999999999999999988 644332 2456788899999999999
Q ss_pred HHHHHHHHhhcccCCceEEEEeCCe-EEEEeecccccCcEEEeCCCCeeeccEEEEecCc----eeeecCCCCCCCCcee
Q 001616 216 RQARQFDKLSKISNNIKVEVVREAR-RLQISIFDLVVGDIVFLKIGDQIPADGLFLDGHS----LQVDESSMTGESDHVE 290 (1044)
Q Consensus 216 ~~~~~~~~l~~~~~~~~v~ViR~G~-~~~I~~~dLvvGDIV~l~~Gd~VPADgill~g~~----l~VDES~LTGEs~pv~ 290 (1044)
.++.++++++++.|+.++.|.|++. ..+..|++|+|||+|.+..+|.+|||.++++++. |+|++++|+||++.+.
T Consensus 100 ~eD~rR~~~D~~iN~~~~~v~~~~~~~~~~~wk~~~vGd~v~v~~~~~~paD~llLsss~~~~~cyveT~nLDGEtnLK~ 179 (1151)
T KOG0206|consen 100 IEDYRRHKQDKEVNNRKVEVLRGDGCFVEKKWKDVRVGDIVRVEKDEFVPADLLLLSSSDEDGICYVETANLDGETNLKV 179 (1151)
T ss_pred HhhhhhhhccHHhhcceeEEecCCceeeeeccceeeeeeEEEeccCCccccceEEecCCCCCceeEEEEeecCCccccce
Confidence 9999999999999999999999644 8999999999999999999999999999998764 7999999999999877
Q ss_pred ecCC---------------------------------------------CCceeeecceEee-CceEEEEEEecccchhH
Q 001616 291 VDST---------------------------------------------NNPFLFSGSKVAD-GYAQMLVVSVGMNTAWG 324 (1044)
Q Consensus 291 k~~~---------------------------------------------~~~~l~sGt~v~~-G~~~~~V~~vG~~T~~g 324 (1044)
|... .++.++.|+++.+ -++.++|+.+|.+|
T Consensus 180 k~~l~~~~~~~~~~~~~~~~~~i~cE~p~~~ly~f~g~l~~~~~~~pl~~~~~Llrg~~lrNT~~v~G~vv~tG~dt--- 256 (1151)
T KOG0206|consen 180 KQALECTSKLDSEDSLKNFKGWIECEDPNANLYTFVGNLELQGQIYPLSPDNLLLRGSRLRNTEWVYGVVVFTGHDT--- 256 (1151)
T ss_pred eeehhhhhcccccccccccCCceEEcCCcccHhhhhhheeeccCCCCCcHHHcccCCceeccCcEEEEEEEEcCCcc---
Confidence 6421 1235677777766 46899999999999
Q ss_pred HHHhhcCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccccCCCCCCcchhHHHHHHHHHH
Q 001616 325 EMMSSISSDSNERTPLQARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAA 404 (1044)
Q Consensus 325 ki~~~~~~~~~~~tplq~~l~~la~~i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (1044)
|+|.+...+..+++++++.+|.....+..+.+.++++..+...+ .........+ ..|...... ........|..
T Consensus 257 K~~~n~~~~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~~~--~~~~~~~~~~-~~~~~~~~~---~~~~~~~~f~t 330 (1151)
T KOG0206|consen 257 KLMQNSGKPPSKRSRIERKMNKIIILLFVLLILMCLISAIGFAI--WTRQDGRHNG-EWWYLSPSE---AAYAGFVHFLT 330 (1151)
T ss_pred hHHHhcCCCccccchhhhhhhhhHHHHHHHHHHHHHHHHhhhhe--eeeecccccC-chhhhcCch---HHHHHHHHHHH
Confidence 77888878999999999999987666555554444444333211 1111101100 112211111 11233445566
Q ss_pred HHHHHHHHhcchhHHHHHHHHHHHHHhhcc----------ccceeccchhhhcccCeeEEeeCcccccccCceEEEEEEe
Q 001616 405 AVTIVVVAIPEGLPLAVTLTLAYSMKRMMT----------DQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKFWL 474 (1044)
Q Consensus 405 ai~ilvvavP~gLplavtl~la~~~~~m~k----------~~~lvr~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~ 474 (1044)
++.++...+|.+|...+.+.-.+.+..+.. ..+.+|..+..|.||++++|++|||||||+|.|.+.+|.+
T Consensus 331 ~~il~~~liPISLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N~M~F~kCsi 410 (1151)
T KOG0206|consen 331 FIILYQYLIPISLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQNSMEFKKCSI 410 (1151)
T ss_pred HHhhhhceEEEEEEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCccccceeeeecccc
Confidence 777888999999999888877766644433 2567999999999999999999999999999999999999
Q ss_pred cccccccccc---------c--------------------------cCChHHHHHHHHHHhhcCCccccccCCCCCccee
Q 001616 475 GQESIVQETY---------C--------------------------KIASSIRDLFHQGVGLNTTGSVSKLKPGSSVAEF 519 (1044)
Q Consensus 475 ~~~~~~~~~~---------~--------------------------~~~~~~~~~l~~~i~~n~~~~~~~~~~~~~~~~~ 519 (1044)
++..|..... + ...+.....+..++++||+...+...+.....|.
T Consensus 411 ~g~~yg~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f~~~la~chtv~~e~~~~~~~~~Y~ 490 (1151)
T KOG0206|consen 411 NGTSYGRNVTEVEAALAKRSGGDVNEHKIKGFTFEDSRLVDGLWSSEPQAEDILEFFRALALCHTVIPEKDEDSGKLSYE 490 (1151)
T ss_pred cCcccccCCChhhcccCccccccccccccccceeccchhhccccccccCcchHHHHhhHHhccceeeeccCCCccceeee
Confidence 9877654210 0 0112233455677888988777652122245788
Q ss_pred cCChhHHHHHHHHHHHcCCChHH------------hhhcccEEEEecCCCCCceEEEEEEecCCCeEEEEecCcHHHHHH
Q 001616 520 SGSPTEKAVLSWAVLEMGMEMDK------------VKQKYSILHVETFNSEKKRSGVLIRRKADNTTHIHWKGAAEIILA 587 (1044)
Q Consensus 520 ~gsp~e~All~~a~~~~g~~~~~------------~~~~~~il~~~pF~s~rkrmsvvv~~~~~~~~~~~~KGA~e~Il~ 587 (1044)
..||+|.|+++.|+ ++|..+-. ....|+++++.+|+|.|||||||+|.++|. +++|||||+.+|.+
T Consensus 491 A~SPDE~AlV~aAr-~~gf~f~~Rt~~~vti~~~g~~~~y~lL~iLeF~S~RKRMSVIVR~p~g~-i~LycKGADsvI~e 568 (1151)
T KOG0206|consen 491 AESPDEAALVEAAR-ELGFVFLGRTPDSVTIRELGVEETYELLNVLEFNSTRKRMSVIVRDPDGR-ILLYCKGADSVIFE 568 (1151)
T ss_pred cCCCcHHHHHHHHH-hcCceeeeccCceEEEeccccceeEEEEEEeccccccceeEEEEEcCCCc-EEEEEcCcchhhHh
Confidence 99999999999998 88876531 235799999999999999999999999885 99999999999999
Q ss_pred hcccccccCCeeecCChhhHHHHHHHHHHHHhcccceeeeeeeecCchhhcccch---------------HHHhhhhccc
Q 001616 588 MCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAYNND---------------VKARQRLKEE 652 (1044)
Q Consensus 588 ~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~~A~k~l~~~~~~~~~~---------------~~~~~~~~e~ 652 (1044)
+++.. .+..+++..+++++||.+||||||+|||+++++++...+. +++..+.+|+
T Consensus 569 rL~~~----------~~~~~e~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~~~Re~~L~e~ae~iEk 638 (1151)
T KOG0206|consen 569 RLSKN----------GEKLREKTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAKTSLTDREELLDEVAEEIEK 638 (1151)
T ss_pred hhhhc----------chHHHHHHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHh
Confidence 99851 2456778889999999999999999999999876443221 1223456899
Q ss_pred CeEEEEEecccCCCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCcccccc----------------------
Q 001616 653 GLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQ---------------------- 710 (1044)
Q Consensus 653 ~l~llG~vgi~D~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~~~~~---------------------- 710 (1044)
||+++|.++|||++++|||++|+.|++||||+||+|||+.+||.+||.+|++++++..
T Consensus 639 ~L~LLGATAIEDkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~~~~~~~~~~~~~~~~ 718 (1151)
T KOG0206|consen 639 DLILLGATAIEDKLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTETSEELSSLDATAALK 718 (1151)
T ss_pred cchhhcceeeechhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecCChhhhcchhhHHHHH
Confidence 9999999999999999999999999999999999999999999999999999976332
Q ss_pred --------------------cccceeecchhhhcCCHHHHH----HH--hccccEEeecChhhHHHHHHHHHhc-CCEEE
Q 001616 711 --------------------VEKGEVVEGVEFRNYTDEERI----QK--VDKIRVMARSSPFDKLLMVQCLKKK-GHVVA 763 (1044)
Q Consensus 711 --------------------~~~~~vi~g~~~~~~~~~~~~----~~--~~~~~V~ar~sP~~K~~lV~~lq~~-g~vVa 763 (1044)
...++|++|+.+....+++.+ +. -++..++||+||.||+.+|+..++. +.+++
T Consensus 719 ~~l~~~~~~~~~~~~~~~~~~~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sPlQKA~Vv~lVk~~~~~~TL 798 (1151)
T KOG0206|consen 719 ETLLRKFTEELEEAKLEHSEKPFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSPLQKALVVKLVKKGLKAVTL 798 (1151)
T ss_pred HHHHHhhhHHHHHHhhccCcCCceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCHHHHHHHHHHHHhcCCceEE
Confidence 035789999998765544322 22 2455699999999999999999854 89999
Q ss_pred EEcCCcCCHHHHhhCCcceeeCCCchHHHhhccCEEEccCChhHHHHH-HHHhHHHHHhHHHHHHHHHHHHHHHHHHHHH
Q 001616 764 VTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATV-LRWGRCVYTNIQKFIQFQLTVNVAALVINFI 842 (1044)
Q Consensus 764 ~~GDG~NDapaLk~AdVGiamg~~gt~vAk~aaDivl~dd~f~~I~~~-i~~GR~~~~ni~k~i~f~l~~nv~~~~~~~~ 842 (1044)
++|||+||++|+++|||||++++.+..+|..+||+.+. .|.-+.++ +.|||+.|.|+.+++.|.+++|+...++.|+
T Consensus 799 AIGDGANDVsMIQ~AhVGVGIsG~EGmQAvmsSD~AIa--qFrfL~rLLLVHGhW~Y~R~a~~ilyfFYKNi~f~~~~fw 876 (1151)
T KOG0206|consen 799 AIGDGANDVSMIQEAHVGVGISGQEGMQAVMSSDFAIA--QFRFLERLLLVHGHWSYIRLAKMILYFFYKNIAFTFTLFW 876 (1151)
T ss_pred EeeCCCccchheeeCCcCeeeccchhhhhhhcccchHH--HHHHHhhhheeecceeHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999998887788899999999999 46666665 7999999999999999999999999999999
Q ss_pred HHHhcC---CCchhHHHHHHHhhhhhHHHHHHhcc---CCCCcccccCCCCCC---CCCcccHHHHHHHHHHHHHHHHHH
Q 001616 843 AAVSAG---EVPLTAVQLLWVNLIMDTLGALALAT---DRPTDELMQRPPVGR---TEPLITNIMWRNLLSQALYQITIL 913 (1044)
Q Consensus 843 ~~~~~~---~~pl~~~qlL~~nli~d~l~alala~---e~p~~~lm~~~P~~~---~~~li~~~~~~~i~~~~~~q~~v~ 913 (1044)
+.++.| ......+++..+|++++.+|.+++|. +.+.+.+|+.|-.++ +..++++..++.++..++||.+++
T Consensus 877 y~f~~gfSgq~~yd~~~l~lyNv~FTSlPvi~lGvfdqDvsa~~~l~~P~LY~~g~~~~~f~~~~f~~~~~~g~~~sli~ 956 (1151)
T KOG0206|consen 877 YQFFNGFSGQTLYDDWYLSLYNVLFTSLPVIVLGVFDQDVSAETLLRFPELYQRGQLNLLFNWKRFWGWMLDGFYQSLVI 956 (1151)
T ss_pred hhhcCCCCCCccccceEEEEEeEEeecCchhheeecccCCCHHHHhhCCcchhhhhhccccchHHHHHHHHHHHHhheee
Confidence 999876 44567889999999999999999983 666666777765443 445677777777888999999888
Q ss_pred HHHHHhccc--ccCCCcccccchhhhHHHHHHHHHHhhhcccccccccccccccHHHHHHHHHHHHHHHHHHHHhhH---
Q 001616 914 LILQFKGES--IFNVSPEVNDTLIFNTFVFCQVFNEFNARKLEKRNVFKGIHKNKLFLGIIGITVVLQVVMVEFLKK--- 988 (1044)
Q Consensus 914 ~~l~~~~~~--~~~~~~~~~~t~~f~~~v~~q~fn~~n~r~~~~~~~f~~~~~n~~f~~~i~~~~~~qv~~v~~~~~--- 988 (1044)
|++.+.... .+..+.....-..|.+.++..++...|.+..-+.+.|. |-|++++ ..++++.+++..+.+.
T Consensus 957 Ff~~~~~~~~~~~~~~G~~~d~~~~G~~~~T~~Vivv~~~iaL~~~ywT--~i~~i~i---~gSi~~~f~f~~iy~~~~~ 1031 (1151)
T KOG0206|consen 957 FFLPYLVFEEQAVTSNGLTADYWTLGTTVFTIIVIVVNLKIALETSYWT--WINHIVI---WGSILLWFVFLFIYSELTP 1031 (1151)
T ss_pred eeeeHhhheeeeeccCCCcCChhhccceEEEEEEEEEEeeeeeeehhee--HHHHHHH---HHHHHHHHHHHHHHhcccc
Confidence 765432211 11111222222233333333333334443222233332 2233332 2233332222222111
Q ss_pred ----------hhccCCCChHHHHHHHHHHHHHHHHHHHhhhcccCCch
Q 001616 989 ----------FADTERLNWQQWLACIAMAAFTWPIGWAVKFIPVTEKP 1026 (1044)
Q Consensus 989 ----------~f~~~~l~~~~w~~~i~~~~~~~~~~~~~k~i~~~~~~ 1026 (1044)
++...--+...|+.+++..+.++.+.++.|.+.....|
T Consensus 1032 ~~~~~~~~~~~~~~~~~~p~fWl~~ll~~v~~Llp~~~~~~l~~~~~P 1079 (1151)
T KOG0206|consen 1032 AISTPDPFYGVAEHLLSSPSFWLTLLLTVVAALLPDFVYKSLQRTFFP 1079 (1151)
T ss_pred ccCCCccHHHHHHHHhcCchHHHHHHHHHHHHHhHHHHHHHHHHhhCC
Confidence 11111236778999999999999999998887654444
No 22
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.2e-87 Score=747.87 Aligned_cols=815 Identities=22% Similarity=0.284 Sum_probs=621.8
Q ss_pred HHhhcCCCcCCCCCCC---cHHHHHHHHhhhhHHHHHHHHHHHHHhhccccCCCCccccchhHHHHHHHHHHHHhHHHHH
Q 001616 139 RSQLFGANTYHKPPPK---GLLHFVLEAFKDTTILILLVCAALSLGFGIKEHGAEEGWYEGGSIFVAVFLVIVVSAFSNF 215 (1044)
Q Consensus 139 r~~~~G~N~~~~~~~~---~~~~~~~~~~~~~~~~illv~a~lsl~~gi~~~g~~~~~~d~~~i~~~v~lv~~v~a~~~~ 215 (1044)
++++|-+|.+...|-+ -+...+++||+.+.++++++.+..++++.+.-.... +...++..+..++.+.+.
T Consensus 75 ~~~r~~pn~v~nqKyn~~tF~p~vl~~qF~~F~nlyfll~alsQ~ip~~~ig~l~-------ty~~pl~fvl~itl~kea 147 (1051)
T KOG0210|consen 75 RRRRFPPNEVRNQKYNIFTFVPAVLFEQFKFFLNLYFLLVALSQLIPALKIGYLS-------TYWGPLGFVLTITLIKEA 147 (1051)
T ss_pred ccccCCCchhhhcccceEEeeHHHHHHHHHHHHHHHHHHHHHHhhCchheecchh-------hhhHHHHHHHHHHHHHHH
Confidence 6677889988876543 345567899999999999999999888764322111 233444555555555555
Q ss_pred HHHHHHHHhhcccCCceEEEE-eCCeEEEEeecccccCcEEEeCCCCeeeccEEEEecC----ceeeecCCCCCCCCcee
Q 001616 216 RQARQFDKLSKISNNIKVEVV-REARRLQISIFDLVVGDIVFLKIGDQIPADGLFLDGH----SLQVDESSMTGESDHVE 290 (1044)
Q Consensus 216 ~~~~~~~~l~~~~~~~~v~Vi-R~G~~~~I~~~dLvvGDIV~l~~Gd~VPADgill~g~----~l~VDES~LTGEs~pv~ 290 (1044)
.++.+++.-+++.|+...+++ |+|-..+ ++++|.|||+|.+..+++||||.+++..+ ++.|-+-.|+||++.+.
T Consensus 148 vdd~~r~~rd~~~Nse~y~~ltr~~~~~~-~Ss~i~vGDvi~v~K~~RVPADmilLrTsd~sg~~FiRTDQLDGETDWKL 226 (1051)
T KOG0210|consen 148 VDDLKRRRRDRELNSEKYTKLTRDGTRRE-PSSDIKVGDVIIVHKDERVPADMILLRTSDKSGSCFIRTDQLDGETDWKL 226 (1051)
T ss_pred HHHHHHHHhhhhhhhhhheeeccCCcccc-cccccccccEEEEecCCcCCcceEEEEccCCCCceEEeccccCCccccee
Confidence 555555555556666666666 6776555 99999999999999999999999999643 36899999999999876
Q ss_pred ecCC---------------------------------------------CCceeeecceEeeCceEEEEEEecccchhHH
Q 001616 291 VDST---------------------------------------------NNPFLFSGSKVADGYAQMLVVSVGMNTAWGE 325 (1044)
Q Consensus 291 k~~~---------------------------------------------~~~~l~sGt~v~~G~~~~~V~~vG~~T~~gk 325 (1044)
|-+- -.+.|+++|.|..|.+.++|++||.+| +
T Consensus 227 rl~vp~tQ~l~~~~el~~i~v~Ae~P~kdIh~F~Gt~~~~d~~~~~~LsventLWanTVvAs~t~~gvVvYTG~dt---R 303 (1051)
T KOG0210|consen 227 RLPVPRTQHLTEDSELMEISVYAEKPQKDIHSFVGTFTITDSDKPESLSVENTLWANTVVASGTAIGVVVYTGRDT---R 303 (1051)
T ss_pred eccchhhccCCcccchheEEEeccCcchhhHhhEEEEEEecCCCCCcccccceeeeeeeEecCcEEEEEEEecccH---H
Confidence 5320 136899999999999999999999999 6
Q ss_pred HHhhcCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccccCCCCCCcchhHHHHHHHHHHH
Q 001616 326 MMSSISSDSNERTPLQARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAAA 405 (1044)
Q Consensus 326 i~~~~~~~~~~~tplq~~l~~la~~i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 405 (1044)
-+.+.+.++.+--.++..+|.+.+++....+.+++++.. ..|.. . .|..++...
T Consensus 304 svMNts~pr~KvGllelEiN~ltKiL~~~vlvLs~vmv~------~~g~~------~--------------~wyi~~~Rf 357 (1051)
T KOG0210|consen 304 SVMNTSRPRSKVGLLELEINGLTKILFCFVLVLSIVMVA------MKGFG------S--------------DWYIYIIRF 357 (1051)
T ss_pred HHhccCCcccccceeeeecccHHHHHHHHHHHHHHHHHH------hhcCC------C--------------chHHHHHHH
Confidence 666667788888889999999998876665555443322 12211 1 334456666
Q ss_pred HHHHHHHhcchhHHHHHHHHHHHHHhhccc----cceeccchhhhcccCeeEEeeCcccccccCceEEEEEEeccccccc
Q 001616 406 VTIVVVAIPEGLPLAVTLTLAYSMKRMMTD----QAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKFWLGQESIVQ 481 (1044)
Q Consensus 406 i~ilvvavP~gLplavtl~la~~~~~m~k~----~~lvr~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~ 481 (1044)
+.++...+|..|-..+.++..+-...+.+| |.+||+....|+||++.++.+|||||||+|+|.+++++.+...|..
T Consensus 358 llLFS~IIPISLRvnlDmaK~~ys~~i~~D~~IpgtvvRSstIPEeLGRIsylLtDKTGTLTqNEM~~KKiHLGTv~~s~ 437 (1051)
T KOG0210|consen 358 LLLFSSIIPISLRVNLDMAKIVYSWQIEHDKNIPGTVVRSSTIPEELGRISYLLTDKTGTLTQNEMEFKKIHLGTVAYSA 437 (1051)
T ss_pred HHHHhhhceeEEEEehhHHHhhHhhhcccCCCCCceeeecCCChHHhcceEEEEecCcCccccchheeeeeeeeeeeccH
Confidence 777777899999999999999888888887 4679999999999999999999999999999999999998766654
Q ss_pred ccc--------------------------ccCChHHHHHHHHHHhhcCCccccccCCCCCcceecCChhHHHHHHHHHHH
Q 001616 482 ETY--------------------------CKIASSIRDLFHQGVGLNTTGSVSKLKPGSSVAEFSGSPTEKAVLSWAVLE 535 (1044)
Q Consensus 482 ~~~--------------------------~~~~~~~~~~l~~~i~~n~~~~~~~~~~~~~~~~~~gsp~e~All~~a~~~ 535 (1044)
+.. ...+..+ .-+.+++++||+...... +++...|+..||+|.||++|.. .
T Consensus 438 e~~~eV~~~i~s~~~~~~~~~~~~~~~~k~~~s~rv-~~~V~alalCHNVTPv~e-~~ge~sYQAaSPDEVAiVkwTe-~ 514 (1051)
T KOG0210|consen 438 ETMDEVSQHIQSLYTPGRNKGKGALSRVKKDMSARV-RNAVLALALCHNVTPVFE-DDGEVSYQAASPDEVAIVKWTE-T 514 (1051)
T ss_pred hHHHHHHHHHHHhhCCCcccccccchhhcCcccHHH-HHHHHHHHHhccCCcccC-CCceEEeecCCCCeEEEEEeee-e
Confidence 320 1111222 334567888888776653 3345679999999999999987 7
Q ss_pred cCCChHH-------------hhhcccEEEEecCCCCCceEEEEEEecCCCeEEEEecCcHHHHHHhcccccccCCeeecC
Q 001616 536 MGMEMDK-------------VKQKYSILHVETFNSEKKRSGVLIRRKADNTTHIHWKGAAEIILAMCSHYYESNGVIKSM 602 (1044)
Q Consensus 536 ~g~~~~~-------------~~~~~~il~~~pF~s~rkrmsvvv~~~~~~~~~~~~KGA~e~Il~~c~~~~~~~g~~~~l 602 (1044)
.|+..-. ...+|+|++++||+|+.||||++||++..+++..|.|||+.+|-..-.
T Consensus 515 VGl~L~~Rd~~~itL~~~~~~~~~yqIL~vFPFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~iVq------------ 582 (1051)
T KOG0210|consen 515 VGLKLAKRDRHAITLRVPLDDELNYQILQVFPFTSETKRMGIIVRDETTEEVTFYLKGADVVMSGIVQ------------ 582 (1051)
T ss_pred cceEEeecccceEEEecCCCcceeEEEEEEeccccccceeeEEEecCCCceEEEEEecchHHHhcccc------------
Confidence 7765321 223799999999999999999999998777899999999988854432
Q ss_pred ChhhHHHHHHHHHHHHhcccceeeeeeeecCchhhcccch------------H----HHhhhhcccCeEEEEEecccCCC
Q 001616 603 DGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAYNND------------V----KARQRLKEEGLTLLGIVGIKDPC 666 (1044)
Q Consensus 603 ~~~~~~~~~~~i~~~a~~glR~l~~A~k~l~~~~~~~~~~------------~----~~~~~~~e~~l~llG~vgi~D~l 666 (1044)
..+.+++...+||.+||||+.+|.|.+++++++.-+. . +.-...+|.|+.++|+.|.||++
T Consensus 583 ---~NdWleEE~gNMAREGLRtLVvakK~Ls~~eye~Fe~~y~~A~lSi~dR~~~ma~vv~~~LE~dlelL~LTGVEDkL 659 (1051)
T KOG0210|consen 583 ---YNDWLEEECGNMAREGLRTLVVAKKVLSEEEYEAFEEAYNAAKLSISDRDQKMANVVERYLERDLELLGLTGVEDKL 659 (1051)
T ss_pred ---cchhhhhhhhhhhhhcceEEEEEecccCHHHHHHHHHHHHhhhCccchHHHHHHHHHHHHHHhhhHHhcccChHHHH
Confidence 1246778889999999999999999999765331110 0 01133678999999999999999
Q ss_pred chhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCccccccc-----------------------ccceeecchhhh
Q 001616 667 RPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQV-----------------------EKGEVVEGVEFR 723 (1044)
Q Consensus 667 R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~~~~~~-----------------------~~~~vi~g~~~~ 723 (1044)
+++|+.+++.||+|||+|||+|||+.+||..||+..++.+.++.. +.+++|+|+.+.
T Consensus 660 Q~dVk~tLElLRNAgikiWMLTGDKlETA~ciAkSs~L~sR~q~ihv~~~v~sr~dah~eL~~lR~k~~~aLvi~G~Sl~ 739 (1051)
T KOG0210|consen 660 QDDVKPTLELLRNAGIKIWMLTGDKLETAICIAKSSRLFSRGQYIHVIRSVTSRGDAHNELNNLRRKTDCALVIDGESLE 739 (1051)
T ss_pred hhhhHhHHHHHhhcCcEEEEEcCcchhheeeeehhccceecCceEEEEEecCCchHHHHHHHHhhcCCCcEEEEcCchHH
Confidence 999999999999999999999999999999999999999865531 467899998886
Q ss_pred c---CCHHHHHHHhccc--cEEeecChhhHHHHHHHHHhc-CCEEEEEcCCcCCHHHHhhCCcceeeCCCchHHHhhccC
Q 001616 724 N---YTDEERIQKVDKI--RVMARSSPFDKLLMVQCLKKK-GHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSD 797 (1044)
Q Consensus 724 ~---~~~~~~~~~~~~~--~V~ar~sP~~K~~lV~~lq~~-g~vVa~~GDG~NDapaLk~AdVGiamg~~gt~vAk~aaD 797 (1044)
- +-++|+.+..+++ .|+|||+|+||+++++.+|++ |..||++|||.||+.|+++||+||++-..+..+|.-|||
T Consensus 740 ~cl~yye~Ef~el~~~~~aVv~CRctPtQKA~v~~llq~~t~krvc~IGDGGNDVsMIq~A~~GiGI~gkEGkQASLAAD 819 (1051)
T KOG0210|consen 740 FCLKYYEDEFIELVCELPAVVCCRCTPTQKAQVVRLLQKKTGKRVCAIGDGGNDVSMIQAADVGIGIVGKEGKQASLAAD 819 (1051)
T ss_pred HHHHHHHHHHHHHHHhcCcEEEEecChhHHHHHHHHHHHhhCceEEEEcCCCccchheeecccceeeecccccccchhcc
Confidence 3 4567888877665 499999999999999999986 999999999999999999999999765566668999999
Q ss_pred EEEccCChhHHHHHHH-HhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHH---HHHHhhhhhHHHHHHhc
Q 001616 798 IVILDDDFTSVATVLR-WGRCVYTNIQKFIQFQLTVNVAALVINFIAAVSAGEVPLTAVQ---LLWVNLIMDTLGALALA 873 (1044)
Q Consensus 798 ivl~dd~f~~I~~~i~-~GR~~~~ni~k~i~f~l~~nv~~~~~~~~~~~~~~~~pl~~~q---lL~~nli~d~l~alala 873 (1044)
+.|. .|+.+.+++. |||+.|.|-.+.-||-+...+....++.+++....+.|..-.| |.-+..+.+.+|.++|.
T Consensus 820 fSIt--qF~Hv~rLLl~HGR~SYkrsa~laqfViHRGL~Is~~Qavfs~v~yF~~V~LyqG~LmvgysT~YTmlPVFSlv 897 (1051)
T KOG0210|consen 820 FSIT--QFSHVSRLLLWHGRNSYKRSAKLAQFVIHRGLIISTMQAVFSSVFYFAPVALYQGFLMVGYSTCYTMLPVFSLV 897 (1051)
T ss_pred ccHH--HHHHHHHHhhccccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhcchHHhhhhHHHHHHHHHHHhhhheee
Confidence 9998 7999999864 5999999999999999999999999999888887777877666 55567888999999998
Q ss_pred cCCC-Ccc-cccCCCCC---CCCCcccHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCcccccchhhhHHHHHHHHHHh
Q 001616 874 TDRP-TDE-LMQRPPVG---RTEPLITNIMWRNLLSQALYQITILLILQFKGESIFNVSPEVNDTLIFNTFVFCQVFNEF 948 (1044)
Q Consensus 874 ~e~p-~~~-lm~~~P~~---~~~~li~~~~~~~i~~~~~~q~~v~~~l~~~~~~~~~~~~~~~~t~~f~~~v~~q~fn~~ 948 (1044)
.+.- +++ .+..|-.+ .++..++.+.+..|...++||..++.+..+. +|..+.....++.|.++++..+....
T Consensus 898 ~d~Dv~~~~a~~yPELYKeL~kgr~lSYKtF~iwvLISiYQG~vim~g~~~---l~~~ef~~ivaisFtaLi~tELiMVa 974 (1051)
T KOG0210|consen 898 LDRDVSESLAVLYPELYKELTKGRSLSYKTFFIWVLISIYQGSVIMYGALL---LFDTEFIHIVAISFTALILTELIMVA 974 (1051)
T ss_pred ecccccHHHHhhhHHHHHHHhcCCccchhhhhhhhhHHHHcccHHHHHHHH---HhhhhheEeeeeeeHHHHHHHHHHHh
Confidence 7554 222 23333221 1234455555666677899998876543221 22222334467778877665543321
Q ss_pred -hhcccccccccccccccHHHHHHHHHHHHHHHHHHHHhhHhhccCC-CChHHHHHHHHHHHHHHHHHHHhhhcccCC
Q 001616 949 -NARKLEKRNVFKGIHKNKLFLGIIGITVVLQVVMVEFLKKFADTER-LNWQQWLACIAMAAFTWPIGWAVKFIPVTE 1024 (1044)
Q Consensus 949 -n~r~~~~~~~f~~~~~n~~f~~~i~~~~~~qv~~v~~~~~~f~~~~-l~~~~w~~~i~~~~~~~~~~~~~k~i~~~~ 1024 (1044)
..+ ..+|+++.+-++++.+.++.+.++..+|+... ++|.+.+...++.++++++-++.|.+...-
T Consensus 975 Ltv~-----------tw~~~m~vae~lsL~~Yivsl~~l~~yfd~~f~~~~~Fl~k~t~I~~vS~Lpl~~~K~lrrk~ 1041 (1051)
T KOG0210|consen 975 LTVR-----------TWHWLMVVAELLSLALYIVSLAFLHEYFDRYFILTYVFLWKVTVITLVSCLPLYFIKALRRKL 1041 (1051)
T ss_pred hhhh-----------hhhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 111 12467777788899999999999999887654 455555556677778888888888876533
No 23
>KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.7e-86 Score=740.90 Aligned_cols=634 Identities=24% Similarity=0.383 Sum_probs=513.1
Q ss_pred hCCHHHHHHHhCCCcCCCCCcCHHHHHHHHhhcCCCcCCCCCCCcHHHHHHHHhhhhHHHHHHHHHHHHHhhccccCCCC
Q 001616 111 LGGVEGVANALGTNPEYGINGNDEDVSRRSQLFGANTYHKPPPKGLLHFVLEAFKDTTILILLVCAALSLGFGIKEHGAE 190 (1044)
Q Consensus 111 ~ggv~~l~~~l~t~~~~GL~~~~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~illv~a~lsl~~gi~~~g~~ 190 (1044)
-|-++++-+.|....+ ||+++| +++|++.||.|++.+++...|++| +.-|.+|.-+..-.+|++...+. ...|.+
T Consensus 20 ~~p~eeVfeeL~~t~~-GLt~~E--~~eRlk~fG~NkleEkken~~lKF-l~Fm~~PlswVMEaAAimA~~La-ng~~~~ 94 (942)
T KOG0205|consen 20 AIPIEEVFEELLCTRE-GLTSDE--VEERLKIFGPNKLEEKKESKFLKF-LGFMWNPLSWVMEAAAIMAIGLA-NGGGRP 94 (942)
T ss_pred cCchhhhHHHHhcCCC-CCchHH--HHHHHHhhCchhhhhhhhhHHHHH-HHHHhchHHHHHHHHHHHHHHHh-cCCCCC
Confidence 4578888888876644 999987 999999999999998877666665 44455677777788888765553 124556
Q ss_pred ccccchhHHHHHHHHHHHHhHHHHHHHHHHHHHhhcccCCceEEEEeCCeEEEEeecccccCcEEEeCCCCeeeccEEEE
Q 001616 191 EGWYEGGSIFVAVFLVIVVSAFSNFRQARQFDKLSKISNNIKVEVVREARRLQISIFDLVVGDIVFLKIGDQIPADGLFL 270 (1044)
Q Consensus 191 ~~~~d~~~i~~~v~lv~~v~a~~~~~~~~~~~~l~~~~~~~~v~ViR~G~~~~I~~~dLvvGDIV~l~~Gd~VPADgill 270 (1044)
..|.|.+.|...++++..++.+++|+.......|.+-. ..+..|+|||+|.++.+.+||||||+.++.||+|||||+|+
T Consensus 95 ~DW~DF~gI~~LLliNsti~FveE~nAGn~aa~L~a~L-A~KakVlRDGkw~E~eAs~lVPGDIlsik~GdIiPaDaRLl 173 (942)
T KOG0205|consen 95 PDWQDFVGICCLLLINSTISFIEENNAGNAAAALMAGL-APKAKVLRDGKWSEQEASILVPGDILSIKLGDIIPADARLL 173 (942)
T ss_pred cchhhhhhhheeeeecceeeeeeccccchHHHHHHhcc-CcccEEeecCeeeeeeccccccCceeeeccCCEecCcccee
Confidence 68999999999999999999999999988888886443 45889999999999999999999999999999999999999
Q ss_pred ecCceeeecCCCCCCCCceeecCCCCceeeecceEeeCceEEEEEEecccchhHHHHhhcCCCCCCCChhHHHHHHHHHH
Q 001616 271 DGHSLQVDESSMTGESDHVEVDSTNNPFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSSISSDSNERTPLQARLDKLTST 350 (1044)
Q Consensus 271 ~g~~l~VDES~LTGEs~pv~k~~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~gki~~~~~~~~~~~tplq~~l~~la~~ 350 (1044)
+|+-|+||+|+|||||.|+.|. +++-+||||.+.+|.+.|+|++||.+|..||...++.. ....-.+|+-++.+.++
T Consensus 174 ~gD~LkiDQSAlTGESLpvtKh--~gd~vfSgSTcKqGE~eaVViATg~~TF~GkAA~LVds-t~~~GHFqkVLt~IGn~ 250 (942)
T KOG0205|consen 174 EGDPLKIDQSALTGESLPVTKH--PGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDS-TNQVGHFQKVLTGIGNF 250 (942)
T ss_pred cCCccccchhhhcCCccccccC--CCCceecccccccceEEEEEEEeccceeehhhHHhhcC-CCCcccHHHHHHhhhhH
Confidence 9999999999999999999998 58889999999999999999999999999999999866 66778899999988776
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccccCCCCCCcchhHHHHHHHHHHHHHHHH-HHhcchhHHHHHHHHHHHH
Q 001616 351 IGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAAAVTIVV-VAIPEGLPLAVTLTLAYSM 429 (1044)
Q Consensus 351 i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~ilv-vavP~gLplavtl~la~~~ 429 (1044)
..... ++. +++.+.+.|.... ...+....-+.+++ -.+|.|||..++.++|.+.
T Consensus 251 ci~si-~~g--~lie~~vmy~~q~----------------------R~~r~~i~nLlvllIGgiPiamPtVlsvTMAiGs 305 (942)
T KOG0205|consen 251 CICSI-ALG--MLIEITVMYPIQH----------------------RLYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGS 305 (942)
T ss_pred HHHHH-HHH--HHHHHHhhhhhhh----------------------hhhhhhhhheheeeecccccccceeeeehhhHHH
Confidence 43222 111 1222222222221 11112222233344 4499999999999999999
Q ss_pred HhhccccceeccchhhhcccCeeEEeeCcccccccCceEEEE--E--EeccccccccccccCChHHHHHHHHHHhhcCCc
Q 001616 430 KRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTK--F--WLGQESIVQETYCKIASSIRDLFHQGVGLNTTG 505 (1044)
Q Consensus 430 ~~m~k~~~lvr~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~--~--~~~~~~~~~~~~~~~~~~~~~~l~~~i~~n~~~ 505 (1044)
.+++++|+++++++|+|.|+.++++|+|||||||.|+++|.+ + +..+ .+++..-+ . .|..+
T Consensus 306 ~rLaqqgAItkrmtAIEemAGmdVLCSDKTGTLTlNkLSvdknl~ev~v~g----------v~~D~~~L--~-A~rAs-- 370 (942)
T KOG0205|consen 306 HRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFVKG----------VDKDDVLL--T-AARAS-- 370 (942)
T ss_pred HHHHhcccHHHHHHHHHHhhCceEEeecCcCceeecceecCcCcceeeecC----------CChHHHHH--H-HHHHh--
Confidence 999999999999999999999999999999999999999987 2 2222 22222211 1 12222
Q ss_pred cccccCCCCCcceecCChhHHHHHHHHHHHcCCChHHhhhcccEEEEecCCCCCceEEEEEEecCCCeEEEEecCcHHHH
Q 001616 506 SVSKLKPGSSVAEFSGSPTEKAVLSWAVLEMGMEMDKVKQKYSILHVETFNSEKKRSGVLIRRKADNTTHIHWKGAAEII 585 (1044)
Q Consensus 506 ~~~~~~~~~~~~~~~gsp~e~All~~a~~~~g~~~~~~~~~~~il~~~pF~s~rkrmsvvv~~~~~~~~~~~~KGA~e~I 585 (1044)
..+ ..+..|.|++.... |+.+.+.+|+.++..|||+..||-+..+.+++|+ .+..+|||||.|
T Consensus 371 r~e-----------n~DAID~A~v~~L~-----dPKeara~ikevhF~PFnPV~Krta~ty~d~dG~-~~r~sKGAPeqi 433 (942)
T KOG0205|consen 371 RKE-----------NQDAIDAAIVGMLA-----DPKEARAGIKEVHFLPFNPVDKRTALTYIDPDGN-WHRVSKGAPEQI 433 (942)
T ss_pred hhc-----------ChhhHHHHHHHhhc-----CHHHHhhCceEEeeccCCccccceEEEEECCCCC-EEEecCCChHHH
Confidence 111 24679999998554 4677888999999999999999999999999887 677899999999
Q ss_pred HHhcccccccCCeeecCChhhHHHHHHHHHHHHhcccceeeeeeeecCchhhcccchHHHhhhhcccCeEEEEEecccCC
Q 001616 586 LAMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAYNNDVKARQRLKEEGLTLLGIVGIKDP 665 (1044)
Q Consensus 586 l~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~~A~k~l~~~~~~~~~~~~~~~~~~e~~l~llG~vgi~D~ 665 (1044)
++.|.. +.+.++++.+.+++||++|+|-+++|++..++.. .+.......|+|+.-+-||
T Consensus 434 l~l~~~-----------~~~i~~~vh~~id~~AeRGlRSLgVArq~v~e~~----------~~~~g~pw~~~gllp~fdp 492 (942)
T KOG0205|consen 434 LKLCNE-----------DHDIPERVHSIIDKFAERGLRSLAVARQEVPEKT----------KESPGGPWEFVGLLPLFDP 492 (942)
T ss_pred HHHhhc-----------cCcchHHHHHHHHHHHHhcchhhhhhhhcccccc----------ccCCCCCcccccccccCCC
Confidence 999974 3456788999999999999999999999887422 1223455789999999999
Q ss_pred CchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCcccccccccceeecchhh-hcCCHHHHHHHhccccEEeecC
Q 001616 666 CRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEF-RNYTDEERIQKVDKIRVMARSS 744 (1044)
Q Consensus 666 lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~g~~~-~~~~~~~~~~~~~~~~V~ar~s 744 (1044)
+|.+..++|+....-|++|.|+|||...-++..++++|+-++-.. .-.+-|..- .++...+..+.+.+..=||.+.
T Consensus 493 prhdsa~tirral~lGv~VkmitgdqlaI~keTgrrlgmgtnmyp---ss~llG~~~~~~~~~~~v~elie~adgfAgVf 569 (942)
T KOG0205|consen 493 PRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYP---SSALLGLGKDGSMPGSPVDELIEKADGFAGVF 569 (942)
T ss_pred CccchHHHHHHHHhccceeeeecchHHHHHHhhhhhhccccCcCC---chhhccCCCCCCCCCCcHHHHhhhccCccccC
Confidence 999999999999999999999999999999999999998653211 001111110 1222234555666677799999
Q ss_pred hhhHHHHHHHHHhcCCEEEEEcCCcCCHHHHhhCCcceeeCCCchHHHhhccCEEEccCChhHHHHHHHHhHHHHHhHHH
Q 001616 745 PFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLRWGRCVYTNIQK 824 (1044)
Q Consensus 745 P~~K~~lV~~lq~~g~vVa~~GDG~NDapaLk~AdVGiamg~~gt~vAk~aaDivl~dd~f~~I~~~i~~GR~~~~ni~k 824 (1044)
|+||+.+|+.||++||.|+|+|||+||+||||+||+|||+. .+|+.|+.+||||+++..++.|..++..+|.+|.+++.
T Consensus 570 pehKy~iV~~Lq~r~hi~gmtgdgvndapaLKkAdigiava-~atdaar~asdiVltepglSviI~avltSraIfqrmkn 648 (942)
T KOG0205|consen 570 PEHKYEIVKILQERKHIVGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKN 648 (942)
T ss_pred HHHHHHHHHHHhhcCceecccCCCcccchhhcccccceeec-cchhhhcccccEEEcCCCchhhHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999998 89999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHH
Q 001616 825 FIQFQLTVNVA 835 (1044)
Q Consensus 825 ~i~f~l~~nv~ 835 (1044)
+..|.++..+-
T Consensus 649 ytiyavsitir 659 (942)
T KOG0205|consen 649 YTIYAVSITIR 659 (942)
T ss_pred heeeeehhHHH
Confidence 98888776554
No 24
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.6e-78 Score=724.56 Aligned_cols=545 Identities=26% Similarity=0.374 Sum_probs=436.6
Q ss_pred CCcHHHHHHHHhhhh-HHH--HHHHHHHHHHhhccccCCCCccccchhHHHHHHHHHHHHhHHHHHHHHH---HHHHhhc
Q 001616 153 PKGLLHFVLEAFKDT-TIL--ILLVCAALSLGFGIKEHGAEEGWYEGGSIFVAVFLVIVVSAFSNFRQAR---QFDKLSK 226 (1044)
Q Consensus 153 ~~~~~~~~~~~~~~~-~~~--illv~a~lsl~~gi~~~g~~~~~~d~~~i~~~v~lv~~v~a~~~~~~~~---~~~~l~~ 226 (1044)
+.+|++-.|+.++.. .++ +..++++.+++++.+..-.. .||+..++++.+++ +-..+.++-+.| ..++|.+
T Consensus 131 g~~f~~~a~~~l~~~~~~md~Lv~la~~~A~~~s~~~~~~~-~yf~~aa~ii~l~~--~G~~LE~~a~~ra~~ai~~L~~ 207 (713)
T COG2217 131 GWPFYRGAWRALRRGRLNMDTLVALATIGAYAYSLYATLFP-VYFEEAAMLIFLFL--LGRYLEARAKGRARRAIRALLD 207 (713)
T ss_pred hHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHhhh-hHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHc
Confidence 456677777777765 222 33333344445553211111 35555544433322 223333443333 3444443
Q ss_pred ccCCceEEEEe-CCeEEEEeecccccCcEEEeCCCCeeeccEEEEecCceeeecCCCCCCCCceeecCCCCceeeecceE
Q 001616 227 ISNNIKVEVVR-EARRLQISIFDLVVGDIVFLKIGDQIPADGLFLDGHSLQVDESSMTGESDHVEVDSTNNPFLFSGSKV 305 (1044)
Q Consensus 227 ~~~~~~v~ViR-~G~~~~I~~~dLvvGDIV~l~~Gd~VPADgill~g~~l~VDES~LTGEs~pv~k~~~~~~~l~sGt~v 305 (1044)
. .+..+++++ ||+.++|+++||++||+|.++|||+||+||++++|++ .||||++||||.|+.|. .++.+++||.+
T Consensus 208 l-~p~~A~~~~~~~~~~~v~v~~v~~GD~v~VrpGE~IPvDG~V~~G~s-~vDeS~iTGEs~PV~k~--~Gd~V~aGtiN 283 (713)
T COG2217 208 L-APKTATVVRGDGEEEEVPVEEVQVGDIVLVRPGERIPVDGVVVSGSS-SVDESMLTGESLPVEKK--PGDEVFAGTVN 283 (713)
T ss_pred c-CCCEEEEEecCCcEEEEEHHHCCCCCEEEECCCCEecCCeEEEeCcE-EeecchhhCCCCCEecC--CCCEEeeeEEE
Confidence 3 456786776 5669999999999999999999999999999999998 99999999999999998 58899999999
Q ss_pred eeCceEEEEEEecccchhHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccccC
Q 001616 306 ADGYAQMLVVSVGMNTAWGEMMSSISSDSNERTPLQARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYN 385 (1044)
Q Consensus 306 ~~G~~~~~V~~vG~~T~~gki~~~~~~~~~~~tplq~~l~~la~~i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~ 385 (1044)
.+|..++.|+++|.+|.+++|.+.+.+++..++|.|+..|+++.++.+..+.+++++|++|.. .+. .
T Consensus 284 ~~G~l~i~vt~~~~dt~la~Ii~LVe~Aq~~Ka~iqrlaDr~a~~fvp~vl~ia~l~f~~w~~---~~~-------~--- 350 (713)
T COG2217 284 LDGSLTIRVTRVGADTTLARIIRLVEEAQSSKAPIQRLADRVASYFVPVVLVIAALTFALWPL---FGG-------G--- 350 (713)
T ss_pred CCccEEEEEEecCccCHHHHHHHHHHHHhhCCchHHHHHHHHHHccHHHHHHHHHHHHHHHHH---hcC-------C---
Confidence 999999999999999999999999999999999999999999999999999999999986532 221 0
Q ss_pred CCCCCcchhHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhhccccceeccchhhhcccCeeEEeeCcccccccC
Q 001616 386 GSNTDIDDVFNAVVSIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLN 465 (1044)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~ai~ilvvavP~gLplavtl~la~~~~~m~k~~~lvr~~~a~E~Lg~v~~Ic~DKTGTLT~n 465 (1044)
.+...+..++++++++|||+|.+++|+++..++.+.+++|+++|+..++|+++++|+++||||||||+|
T Consensus 351 -----------~~~~a~~~a~avLVIaCPCALgLAtP~ai~~g~g~aA~~GILiK~g~~LE~l~~v~tvvFDKTGTLT~G 419 (713)
T COG2217 351 -----------DWETALYRALAVLVIACPCALGLATPTAILVGIGRAARRGILIKGGEALERLAKVDTVVFDKTGTLTEG 419 (713)
T ss_pred -----------cHHHHHHHHHhheeeeCccHHHhHHHHHHHHHHHHHHhCceEEeChHHHHhhccCCEEEEeCCCCCcCC
Confidence 345678899999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEEEeccccccccccccCChHHHHHHHHHHhhcCCccccccCCCCCcceecCChhHHHHHHHHHHHcCCChHHhhh
Q 001616 466 QMKVTKFWLGQESIVQETYCKIASSIRDLFHQGVGLNTTGSVSKLKPGSSVAEFSGSPTEKAVLSWAVLEMGMEMDKVKQ 545 (1044)
Q Consensus 466 ~m~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~n~~~~~~~~~~~~~~~~~~gsp~e~All~~a~~~~g~~~~~~~~ 545 (1044)
+|+|+++...+. + ..++|..+.++ + ..+.||..+|+++++. +.|..
T Consensus 420 ~p~v~~v~~~~~--~----------e~~~L~laAal------E---------~~S~HPiA~AIv~~a~-~~~~~------ 465 (713)
T COG2217 420 KPEVTDVVALDG--D----------EDELLALAAAL------E---------QHSEHPLAKAIVKAAA-ERGLP------ 465 (713)
T ss_pred ceEEEEEecCCC--C----------HHHHHHHHHHH------H---------hcCCChHHHHHHHHHH-hcCCC------
Confidence 999999876443 1 11233322221 1 2367999999999887 44411
Q ss_pred cccEEEEecCCCCCceEEEEEEecCCCeEEEEecCcHHHHHHhcccccccCCeeecCChhhHHHHHHHHHHHHhccccee
Q 001616 546 KYSILHVETFNSEKKRSGVLIRRKADNTTHIHWKGAAEIILAMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCI 625 (1044)
Q Consensus 546 ~~~il~~~pF~s~rkrmsvvv~~~~~~~~~~~~KGA~e~Il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l 625 (1044)
..+....+| ..|+.-+. +|..+ .-|.+..+.+.-.. .+ . ..+..+.+.++|..++
T Consensus 466 ~~~~~~~i~------G~Gv~~~v-~g~~v---~vG~~~~~~~~~~~----------~~----~-~~~~~~~~~~~G~t~v 520 (713)
T COG2217 466 DVEDFEEIP------GRGVEAEV-DGERV---LVGNARLLGEEGID----------LP----L-LSERIEALESEGKTVV 520 (713)
T ss_pred Cccceeeec------cCcEEEEE-CCEEE---EEcCHHHHhhcCCC----------cc----c-hhhhHHHHHhcCCeEE
Confidence 001112222 33444333 44334 44998887542110 11 1 4456777888898777
Q ss_pred eeeeeecCchhhcccchHHHhhhhcccCeEEEEEecccCCCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCc
Q 001616 626 AFAYKQVSEEETAYNNDVKARQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGIL 705 (1044)
Q Consensus 626 ~~A~k~l~~~~~~~~~~~~~~~~~~e~~l~llG~vgi~D~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~ 705 (1044)
.++. |-.++|+++++|++||+++++|+.||+.|+++.|+||||..+|++||+++||.
T Consensus 521 ~va~-----------------------dg~~~g~i~~~D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId 577 (713)
T COG2217 521 FVAV-----------------------DGKLVGVIALADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGID 577 (713)
T ss_pred EEEE-----------------------CCEEEEEEEEeCCCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChH
Confidence 7775 33799999999999999999999999999999999999999999999999996
Q ss_pred ccccccccceeecchhhhcCCHHHHHHHhccccEEeecChhhHHHHHHHHHhcCCEEEEEcCCcCCHHHHhhCCcceeeC
Q 001616 706 RLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMG 785 (1044)
Q Consensus 706 ~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~ar~sP~~K~~lV~~lq~~g~vVa~~GDG~NDapaLk~AdVGiamg 785 (1044)
+ ++|.+.|+||.++|+.||++|++|+|+|||+||+|||++||||||||
T Consensus 578 ~--------------------------------v~AellPedK~~~V~~l~~~g~~VamVGDGINDAPALA~AdVGiAmG 625 (713)
T COG2217 578 E--------------------------------VRAELLPEDKAEIVRELQAEGRKVAMVGDGINDAPALAAADVGIAMG 625 (713)
T ss_pred h--------------------------------heccCCcHHHHHHHHHHHhcCCEEEEEeCCchhHHHHhhcCeeEeec
Confidence 4 89999999999999999999999999999999999999999999999
Q ss_pred CCchHHHhhccCEEEccCChhHHHHHHHHhHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Q 001616 786 IQGTEVAKESSDIVILDDDFTSVATVLRWGRCVYTNIQKFIQFQLTVNVAALVINFIA 843 (1044)
Q Consensus 786 ~~gt~vAk~aaDivl~dd~f~~I~~~i~~GR~~~~ni~k~i~f~l~~nv~~~~~~~~~ 843 (1044)
+|||+|+|+||++|++|++..++.+++.+|+++++|++++.|.+.||+++++++..+
T Consensus 626 -~GtDvA~eaADvvL~~~dL~~v~~ai~lsr~t~~~IkqNl~~A~~yn~~~iplA~~g 682 (713)
T COG2217 626 -SGTDVAIEAADVVLMRDDLSAVPEAIDLSRATRRIIKQNLFWAFGYNAIAIPLAAGG 682 (713)
T ss_pred -CCcHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 699999999999999999999999999999999999999999999999999988876
No 25
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=100.00 E-value=7.9e-77 Score=734.44 Aligned_cols=535 Identities=23% Similarity=0.327 Sum_probs=441.5
Q ss_pred CcHHHHHHHHhhh--h--HHHHHHHHHHHHHhhccccCCCCccccchhHHHHHHHHHHHHhHHHHHHHHHHHHHhhcccC
Q 001616 154 KGLLHFVLEAFKD--T--TILILLVCAALSLGFGIKEHGAEEGWYEGGSIFVAVFLVIVVSAFSNFRQARQFDKLSKISN 229 (1044)
Q Consensus 154 ~~~~~~~~~~~~~--~--~~~illv~a~lsl~~gi~~~g~~~~~~d~~~i~~~v~lv~~v~a~~~~~~~~~~~~l~~~~~ 229 (1044)
.+|++-.|+.++. + +..+..++++.++++| .|.++..+++.+++.-.++.+.+++.++..++|.+. .
T Consensus 171 ~~~~~~a~~~l~~~~~~~~~~L~~~a~~~a~~~~--------~~~~a~~i~~l~~~g~~le~~~~~ra~~~~~~L~~l-~ 241 (741)
T PRK11033 171 YPIARKALRLIRSGSPFAIETLMSVAAIGALFIG--------ATAEAAMVLLLFLIGERLEGYAASRARRGVSALMAL-V 241 (741)
T ss_pred HHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHHc--------chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-C
Confidence 3566666666653 2 2233445555556554 366666666655555666666666677777777654 5
Q ss_pred CceEEEEeCCeEEEEeecccccCcEEEeCCCCeeeccEEEEecCceeeecCCCCCCCCceeecCCCCceeeecceEeeCc
Q 001616 230 NIKVEVVREARRLQISIFDLVVGDIVFLKIGDQIPADGLFLDGHSLQVDESSMTGESDHVEVDSTNNPFLFSGSKVADGY 309 (1044)
Q Consensus 230 ~~~v~ViR~G~~~~I~~~dLvvGDIV~l~~Gd~VPADgill~g~~l~VDES~LTGEs~pv~k~~~~~~~l~sGt~v~~G~ 309 (1044)
+.+++|+|||++++|++++|+|||+|.+++||+|||||++++|+. .||||+|||||.|+.|. .++.+|+||.+.+|.
T Consensus 242 p~~a~vir~g~~~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi~g~~-~vdes~lTGEs~Pv~k~--~Gd~V~aGt~~~~G~ 318 (741)
T PRK11033 242 PETATRLRDGEREEVAIADLRPGDVIEVAAGGRLPADGKLLSPFA-SFDESALTGESIPVERA--TGEKVPAGATSVDRL 318 (741)
T ss_pred CCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEecceEEEECcE-EeecccccCCCCCEecC--CCCeeccCCEEcCce
Confidence 678999999999999999999999999999999999999999985 99999999999999998 578999999999999
Q ss_pred eEEEEEEecccchhHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccccCCCCC
Q 001616 310 AQMLVVSVGMNTAWGEMMSSISSDSNERTPLQARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNT 389 (1044)
Q Consensus 310 ~~~~V~~vG~~T~~gki~~~~~~~~~~~tplq~~l~~la~~i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~~ 389 (1044)
+++.|+++|.+|++|||.+.+.+.+.+++|+|+.+++++.++.++++++++++|++|... .+.
T Consensus 319 ~~i~V~~~g~~s~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~~~~v~~~a~~~~~~~~~~--~~~--------------- 381 (741)
T PRK11033 319 VTLEVLSEPGASAIDRILHLIEEAEERRAPIERFIDRFSRIYTPAIMLVALLVILVPPLL--FAA--------------- 381 (741)
T ss_pred EEEEEEeccccCHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--ccC---------------
Confidence 999999999999999999999998889999999999999999999999999998876321 110
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhhccccceeccchhhhcccCeeEEeeCcccccccCceEE
Q 001616 390 DIDDVFNAVVSIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKV 469 (1044)
Q Consensus 390 ~~~~~~~~~~~~~~~ai~ilvvavP~gLplavtl~la~~~~~m~k~~~lvr~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v 469 (1044)
.+...+..++++++++|||+|.+++|+++..++.+++|+|+++|+.+++|+|+++|+||||||||||+|+|+|
T Consensus 382 -------~~~~~i~~a~svlviacPcaL~latP~a~~~~l~~aar~gilik~~~alE~l~~v~~v~fDKTGTLT~g~~~v 454 (741)
T PRK11033 382 -------PWQEWIYRGLTLLLIGCPCALVISTPAAITSGLAAAARRGALIKGGAALEQLGRVTTVAFDKTGTLTEGKPQV 454 (741)
T ss_pred -------CHHHHHHHHHHHHHHhchhhhhhhhHHHHHHHHHHHHHCCeEEcCcHHHHHhhCCCEEEEeCCCCCcCCceEE
Confidence 2344677889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeccccccccccccCChHHHHHHHHHHhhcCCccccccCCCCCcceecCChhHHHHHHHHHHHcCCChHHhhhcccE
Q 001616 470 TKFWLGQESIVQETYCKIASSIRDLFHQGVGLNTTGSVSKLKPGSSVAEFSGSPTEKAVLSWAVLEMGMEMDKVKQKYSI 549 (1044)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~n~~~~~~~~~~~~~~~~~~gsp~e~All~~a~~~~g~~~~~~~~~~~i 549 (1044)
++++..+. + +++ +++..+.+. + ..+.||.++|+++++. +.+.+
T Consensus 455 ~~~~~~~~-~--------~~~--~~l~~aa~~------e---------~~s~hPia~Ai~~~a~-~~~~~---------- 497 (741)
T PRK11033 455 TDIHPATG-I--------SES--ELLALAAAV------E---------QGSTHPLAQAIVREAQ-VRGLA---------- 497 (741)
T ss_pred EEEEecCC-C--------CHH--HHHHHHHHH------h---------cCCCCHHHHHHHHHHH-hcCCC----------
Confidence 99875332 1 111 222222111 1 1257999999999987 44432
Q ss_pred EEEecCCCCCceEE-EEEE-ecCCCeEEEEecCcHHHHHHhcccccccCCeeecCChhhHHHHHHHHHHHHhcccceeee
Q 001616 550 LHVETFNSEKKRSG-VLIR-RKADNTTHIHWKGAAEIILAMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAF 627 (1044)
Q Consensus 550 l~~~pF~s~rkrms-vvv~-~~~~~~~~~~~KGA~e~Il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~~ 627 (1044)
+||.++++.+. .-++ ..+|..+ ..|+++.+.+ ++ +.+.+.++.+.++|+|++++
T Consensus 498 ---~~~~~~~~~~~g~Gv~~~~~g~~~---~ig~~~~~~~--------------~~----~~~~~~~~~~~~~g~~~v~v 553 (741)
T PRK11033 498 ---IPEAESQRALAGSGIEGQVNGERV---LICAPGKLPP--------------LA----DAFAGQINELESAGKTVVLV 553 (741)
T ss_pred ---CCCCcceEEEeeEEEEEEECCEEE---EEecchhhhh--------------cc----HHHHHHHHHHHhCCCEEEEE
Confidence 46777776652 2122 1244333 3488887642 11 23445567889999999999
Q ss_pred eeeecCchhhcccchHHHhhhhcccCeEEEEEecccCCCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCccc
Q 001616 628 AYKQVSEEETAYNNDVKARQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRL 707 (1044)
Q Consensus 628 A~k~l~~~~~~~~~~~~~~~~~~e~~l~llG~vgi~D~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~~ 707 (1044)
|+ |.+++|+++++|++|||++++|+.|+++|++++|+|||+..+|.++|+++||.
T Consensus 554 a~-----------------------~~~~~g~i~l~d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~-- 608 (741)
T PRK11033 554 LR-----------------------NDDVLGLIALQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGID-- 608 (741)
T ss_pred EE-----------------------CCEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC--
Confidence 97 34799999999999999999999999999999999999999999999999995
Q ss_pred ccccccceeecchhhhcCCHHHHHHHhccccEEeecChhhHHHHHHHHHhcCCEEEEEcCCcCCHHHHhhCCcceeeCCC
Q 001616 708 DQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQ 787 (1044)
Q Consensus 708 ~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~ar~sP~~K~~lV~~lq~~g~vVa~~GDG~NDapaLk~AdVGiamg~~ 787 (1044)
.+++.+|+||..+|+.||+. +.|+|+|||+||+|||++|||||||| +
T Consensus 609 -------------------------------~~~~~~p~~K~~~v~~l~~~-~~v~mvGDgiNDapAl~~A~vgia~g-~ 655 (741)
T PRK11033 609 -------------------------------FRAGLLPEDKVKAVTELNQH-APLAMVGDGINDAPAMKAASIGIAMG-S 655 (741)
T ss_pred -------------------------------eecCCCHHHHHHHHHHHhcC-CCEEEEECCHHhHHHHHhCCeeEEec-C
Confidence 36788999999999999965 58999999999999999999999999 8
Q ss_pred chHHHhhccCEEEccCChhHHHHHHHHhHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Q 001616 788 GTEVAKESSDIVILDDDFTSVATVLRWGRCVYTNIQKFIQFQLTVNVAALVINFIA 843 (1044)
Q Consensus 788 gt~vAk~aaDivl~dd~f~~I~~~i~~GR~~~~ni~k~i~f~l~~nv~~~~~~~~~ 843 (1044)
|+++++++||++++++++..+..++++||++++||++++.|.+.+|++++++.+++
T Consensus 656 ~~~~a~~~adivl~~~~l~~l~~~i~~sr~~~~~I~~nl~~a~~~n~~~i~~a~~g 711 (741)
T PRK11033 656 GTDVALETADAALTHNRLRGLAQMIELSRATHANIRQNITIALGLKAIFLVTTLLG 711 (741)
T ss_pred CCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999988887654
No 26
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=100.00 E-value=4.2e-77 Score=713.98 Aligned_cols=493 Identities=38% Similarity=0.571 Sum_probs=432.1
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHhhc-ccCCceEEEEeCCeEEEEeecccccCcEEEeCCCCeeeccEEEEecCceeeec
Q 001616 201 VAVFLVIVVSAFSNFRQARQFDKLSK-ISNNIKVEVVREARRLQISIFDLVVGDIVFLKIGDQIPADGLFLDGHSLQVDE 279 (1044)
Q Consensus 201 ~~v~lv~~v~a~~~~~~~~~~~~l~~-~~~~~~v~ViR~G~~~~I~~~dLvvGDIV~l~~Gd~VPADgill~g~~l~VDE 279 (1044)
+.+++..+++++.+++.++..+++.+ ..++.+++|+|+| +++|++++|+|||+|.+++||+|||||++++|+ +.|||
T Consensus 4 ~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~r~g-~~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl~g~-~~vde 81 (499)
T TIGR01494 4 ILVLLFALVEVAAKRAAEDAIRSLKDLLVNPETVTVLRNG-WKEIPASDLVPGDIVLVKSGEIVPADGVLLSGS-CFVDE 81 (499)
T ss_pred EhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEEECC-eEEEEHHHCCCCCEEEECCCCEeeeeEEEEEcc-EEEEc
Confidence 34556677788888888888888865 3567899999999 999999999999999999999999999999996 59999
Q ss_pred CCCCCCCCceeecCCCCceeeecceEeeCceEEEEEEecccchhHHHHhhcCCCCCCCChhHHHHHHHH-HHHHHHHHHH
Q 001616 280 SSMTGESDHVEVDSTNNPFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSSISSDSNERTPLQARLDKLT-STIGKVGLAV 358 (1044)
Q Consensus 280 S~LTGEs~pv~k~~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~gki~~~~~~~~~~~tplq~~l~~la-~~i~~~~l~~ 358 (1044)
|+|||||.|+.|. .++.+++||.+.+|..++.|+.+|.+|..|++...+.+....++|+|++.++++ .++..+.+.+
T Consensus 82 s~LTGEs~pv~k~--~g~~v~~gs~~~~G~~~~~v~~~~~~s~~~~i~~~v~~~~~~k~~~~~~~~~~~~~~~~~~~~~l 159 (499)
T TIGR01494 82 SNLTGESVPVLKT--AGDAVFAGTYVFNGTLIVVVSATGPNTFGGKIAVVVYTGFETKTPLQPKLDRLSDIIFILFVLLI 159 (499)
T ss_pred ccccCCCCCeeec--cCCccccCcEEeccEEEEEEEEeccccHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHH
Confidence 9999999999998 477899999999999999999999999999999998877777899999999999 7787777777
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCccccCCCCCCcchhHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhhccccce
Q 001616 359 AFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMTDQAM 438 (1044)
Q Consensus 359 a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~ilvvavP~gLplavtl~la~~~~~m~k~~~l 438 (1044)
++++++.++..+... . .+...+..++++++++|||+||++++++++.+..+|+++|++
T Consensus 160 a~~~~~~~~~~~~~~--------~--------------~~~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~~~~~~gil 217 (499)
T TIGR01494 160 ALAVFLFWAIGLWDP--------N--------------SIFKIFLRALILLVIAIPIALPLAVTIALAVGDARLAKKGIV 217 (499)
T ss_pred HHHHHHHHHHHHccc--------c--------------cHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHCCcE
Confidence 777777654321100 0 245678889999999999999999999999999999999999
Q ss_pred eccchhhhcccCeeEEeeCcccccccCceEEEEEEeccccccccccccCChHHHHHHHHHHhhcCCccccccCCCCCcce
Q 001616 439 VRKLPACETMGSATVICTDKTGTLTLNQMKVTKFWLGQESIVQETYCKIASSIRDLFHQGVGLNTTGSVSKLKPGSSVAE 518 (1044)
Q Consensus 439 vr~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~n~~~~~~~~~~~~~~~~ 518 (1044)
+|+++++|+||++|++|||||||||+|+|+|++++..+. .+
T Consensus 218 vk~~~~lE~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~---------------------------------------~~ 258 (499)
T TIGR01494 218 VRSLNALEELGKVDYICSDKTGTLTKNEMSFKKVSVLGG---------------------------------------EY 258 (499)
T ss_pred EechhhhhhccCCcEEEeeCCCccccCceEEEEEEecCC---------------------------------------Cc
Confidence 999999999999999999999999999999999875321 02
Q ss_pred ecCChhHHHHHHHHHHHcCCChHHhhhcccEEEEecCCCCCceEEEEEEecCCCeEEEEecCcHHHHHHhcccccccCCe
Q 001616 519 FSGSPTEKAVLSWAVLEMGMEMDKVKQKYSILHVETFNSEKKRSGVLIRRKADNTTHIHWKGAAEIILAMCSHYYESNGV 598 (1044)
Q Consensus 519 ~~gsp~e~All~~a~~~~g~~~~~~~~~~~il~~~pF~s~rkrmsvvv~~~~~~~~~~~~KGA~e~Il~~c~~~~~~~g~ 598 (1044)
.++||.|.|+++++. . +.+...||++.+|+|+++++.+++ .++||+++.+++.|.+
T Consensus 259 ~s~hp~~~ai~~~~~-~------------~~~~~~~f~~~~~~~~~~~~~~~~----~~~~G~~~~i~~~~~~------- 314 (499)
T TIGR01494 259 LSGHPDERALVKSAK-W------------KILNVFEFSSVRKRMSVIVRGPDG----TYVKGAPEFVLSRVKD------- 314 (499)
T ss_pred CCCChHHHHHHHHhh-h------------cCcceeccCCCCceEEEEEecCCc----EEEeCCHHHHHHhhHH-------
Confidence 367999999999886 2 123568999999999999875322 4689999999998852
Q ss_pred eecCChhhHHHHHHHHHHHHhcccceeeeeeeecCchhhcccchHHHhhhhcccCeEEEEEecccCCCchhHHHHHHHHH
Q 001616 599 IKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAYNNDVKARQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQ 678 (1044)
Q Consensus 599 ~~~l~~~~~~~~~~~i~~~a~~glR~l~~A~k~l~~~~~~~~~~~~~~~~~~e~~l~llG~vgi~D~lR~~v~~aI~~l~ 678 (1044)
+.+.+++++.+|+|++++|++. +++|+++++|++|++++++|+.|+
T Consensus 315 -----------~~~~~~~~~~~g~~~~~~a~~~-----------------------~~~g~i~l~d~lr~~~~~~i~~l~ 360 (499)
T TIGR01494 315 -----------LEEKVKELAQSGLRVLAVASKE-----------------------TLLGLLGLEDPLRDDAKETISELR 360 (499)
T ss_pred -----------HHHHHHHHHhCCCEEEEEEECC-----------------------eEEEEEEecCCCchhHHHHHHHHH
Confidence 2234456788999999999832 699999999999999999999999
Q ss_pred hcCCEEEEEcCCCHHHHHHHHHHcCCcccccccccceeecchhhhcCCHHHHHHHhccccEEeecChhhHHHHHHHHHhc
Q 001616 679 SAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPFDKLLMVQCLKKK 758 (1044)
Q Consensus 679 ~aGI~v~mlTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~ar~sP~~K~~lV~~lq~~ 758 (1044)
++|++++|+|||+..+|.++|+++|| ++|++|+||.++|+.+|+.
T Consensus 361 ~~gi~~~~ltGD~~~~a~~ia~~lgi-----------------------------------~~~~~p~~K~~~v~~l~~~ 405 (499)
T TIGR01494 361 EAGIRVIMLTGDNVLTAKAIAKELGI-----------------------------------FARVTPEEKAALVEALQKK 405 (499)
T ss_pred HCCCeEEEEcCCCHHHHHHHHHHcCc-----------------------------------eeccCHHHHHHHHHHHHHC
Confidence 99999999999999999999999986 5889999999999999999
Q ss_pred CCEEEEEcCCcCCHHHHhhCCcceeeCCCchHHHhhccCEEEccCChhHHHHHHHHhHHHHHhHHHHHHHHHHHHHHHHH
Q 001616 759 GHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLRWGRCVYTNIQKFIQFQLTVNVAALV 838 (1044)
Q Consensus 759 g~vVa~~GDG~NDapaLk~AdVGiamg~~gt~vAk~aaDivl~dd~f~~I~~~i~~GR~~~~ni~k~i~f~l~~nv~~~~ 838 (1044)
|+.|+|+|||+||+|||++|||||||| |+++||++++++++..+..++++||++++++++++.|.+++|++.++
T Consensus 406 g~~v~~vGDg~nD~~al~~Advgia~~------a~~~adivl~~~~l~~i~~~~~~~r~~~~~i~~~~~~~~~~n~~~~~ 479 (499)
T TIGR01494 406 GRVVAMTGDGVNDAPALKKADVGIAMG------AKAAADIVLLDDNLSTIVDALKEGRKTFSTIKSNIFWAIAYNLILIP 479 (499)
T ss_pred CCEEEEECCChhhHHHHHhCCCccccc------hHHhCCeEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999997 79999999999999999999999999999999999999999999888
Q ss_pred HHHHHHHhcCCCchhHHHHHHHhhhhhHHHHHH
Q 001616 839 INFIAAVSAGEVPLTAVQLLWVNLIMDTLGALA 871 (1044)
Q Consensus 839 ~~~~~~~~~~~~pl~~~qlL~~nli~d~l~ala 871 (1044)
+++++.+ +|+++++.++++
T Consensus 480 ~a~~~~~--------------~~~~~~~~~~~~ 498 (499)
T TIGR01494 480 LAALLAV--------------LNLVPPGLAALA 498 (499)
T ss_pred HHHHHHH--------------HHHHhcchhhhc
Confidence 7776442 788888877654
No 27
>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.2e-77 Score=681.97 Aligned_cols=820 Identities=20% Similarity=0.277 Sum_probs=585.3
Q ss_pred CCCCcCHHHHHHHHhhcCCCcCCCCCCCcHHHHHHHHhhhhHHHHHHHHHHHHHhhccccCCCCccccchhHHHHHHHHH
Q 001616 127 YGINGNDEDVSRRSQLFGANTYHKPPPKGLLHFVLEAFKDTTILILLVCAALSLGFGIKEHGAEEGWYEGGSIFVAVFLV 206 (1044)
Q Consensus 127 ~GL~~~~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~illv~a~lsl~~gi~~~g~~~~~~d~~~i~~~v~lv 206 (1044)
+|.. ++.++..-++.||.|+...+. .+|-+++.|.-..|++.+..+|..++.. ++.||.+.. .++..
T Consensus 161 ~G~~-~~~~i~~a~~~~G~N~fdi~v-PtF~eLFkE~A~aPfFVFQVFcvgLWCL--------DeyWYySlF---tLfMl 227 (1160)
T KOG0209|consen 161 TGHE-EESEIKLAKHKYGKNKFDIVV-PTFSELFKEHAVAPFFVFQVFCVGLWCL--------DEYWYYSLF---TLFML 227 (1160)
T ss_pred cCcc-hHHHHHHHHHHhcCCccccCC-ccHHHHHHHhccCceeeHhHHhHHHHHh--------HHHHHHHHH---HHHHH
Confidence 5776 455777777889999999874 5899999999999999999999988863 347987643 33344
Q ss_pred HHHhHHHHHHHHHHHHHhhcccC-CceEEEEeCCeEEEEeecccccCcEEEeCC---CCeeeccEEEEecCceeeecCCC
Q 001616 207 IVVSAFSNFRQARQFDKLSKISN-NIKVEVVREARRLQISIFDLVVGDIVFLKI---GDQIPADGLFLDGHSLQVDESSM 282 (1044)
Q Consensus 207 ~~v~a~~~~~~~~~~~~l~~~~~-~~~v~ViR~G~~~~I~~~dLvvGDIV~l~~---Gd~VPADgill~g~~l~VDES~L 282 (1044)
+.+++.--+++.+...++.++.+ +..+.|+|+++|+.+..+||+|||+|.+.. ...||||.+++.|++ .|||++|
T Consensus 228 i~fE~tlV~Qrm~~lse~R~Mg~kpy~I~v~R~kKW~~l~seeLlPgDvVSI~r~~ed~~vPCDllLL~Gsc-iVnEaML 306 (1160)
T KOG0209|consen 228 IAFEATLVKQRMRTLSEFRTMGNKPYTINVYRNKKWVKLMSEELLPGDVVSIGRGAEDSHVPCDLLLLRGSC-IVNEAML 306 (1160)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCceEEEEEecCcceeccccccCCCceEEeccCcccCcCCceEEEEecce-eechhhh
Confidence 45555555667777777766544 458999999999999999999999999976 568999999999986 8999999
Q ss_pred CCCCCceeecCC---------------CCceeeecceEe-------------eCceEEEEEEecccchhHHHHhhcCCCC
Q 001616 283 TGESDHVEVDST---------------NNPFLFSGSKVA-------------DGYAQMLVVSVGMNTAWGEMMSSISSDS 334 (1044)
Q Consensus 283 TGEs~pv~k~~~---------------~~~~l~sGt~v~-------------~G~~~~~V~~vG~~T~~gki~~~~~~~~ 334 (1044)
||||.|..|.+- +...+|.||+++ ||.+.+.|++||.+|..|++++.+.-..
T Consensus 307 tGESvPl~KE~Ie~~~~d~~ld~~~d~k~hVlfGGTkivQht~p~~~slk~pDggc~a~VlrTGFeTSQGkLvRtilf~a 386 (1160)
T KOG0209|consen 307 TGESVPLMKESIELRDSDDILDIDRDDKLHVLFGGTKIVQHTPPKKASLKTPDGGCVAYVLRTGFETSQGKLVRTILFSA 386 (1160)
T ss_pred cCCCccccccccccCChhhhcccccccceEEEEcCceEEEecCCccccccCCCCCeEEEEEeccccccCCceeeeEEecc
Confidence 999999988741 456899999997 5789999999999999999999987666
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccccCCCCCCcchhHHHHHHHHHHHHHHHHHHhc
Q 001616 335 NERTPLQARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAAAVTIVVVAIP 414 (1044)
Q Consensus 335 ~~~tplq~~l~~la~~i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~ilvvavP 414 (1044)
++-|.-.+ +. +.+++.+++|.+....|.......+... +-...|+-++.|+...+|
T Consensus 387 ervTaNn~--Et-------f~FILFLlVFAiaAa~Yvwv~Gskd~~R---------------srYKL~LeC~LIlTSVvP 442 (1160)
T KOG0209|consen 387 ERVTANNR--ET-------FIFILFLLVFAIAAAGYVWVEGSKDPTR---------------SRYKLFLECTLILTSVVP 442 (1160)
T ss_pred eeeeeccH--HH-------HHHHHHHHHHHHHhhheEEEecccCcch---------------hhhheeeeeeEEEeccCC
Confidence 55553222 11 1223334444444444433221111111 112345556677888899
Q ss_pred chhHHHHHHHHHHHHHhhccccceeccchhhhcccCeeEEeeCcccccccCceEEEEEEeccc-cccccccccCChHHHH
Q 001616 415 EGLPLAVTLTLAYSMKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKFWLGQE-SIVQETYCKIASSIRD 493 (1044)
Q Consensus 415 ~gLplavtl~la~~~~~m~k~~~lvr~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~-~~~~~~~~~~~~~~~~ 493 (1044)
.-||+-++++.--+...+.|.++.|..+-.+.-.|++|+.|||||||||+..|.|..+--... .......+..+.+...
T Consensus 443 pELPmELSmAVNsSL~ALak~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~Gvag~~~~~~~~~~~s~~p~~t~~ 522 (1160)
T KOG0209|consen 443 PELPMELSMAVNSSLIALAKLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEGVAGLSADEGALTPASKAPNETVL 522 (1160)
T ss_pred CCCchhhhHHHHHHHHHHHHhceeecCccccccCCceeEEEecCCCccccccEEEEecccccCCcccccchhhCCchHHH
Confidence 999999999999999999999999999999999999999999999999999999998754221 1111122333333333
Q ss_pred HHHHHHhhcCCccccccCCCCCcceecCChhHHHHHHHHHHHcCCCh-----HHhhhcccEEEEecCCCCCceEEEEEEe
Q 001616 494 LFHQGVGLNTTGSVSKLKPGSSVAEFSGSPTEKAVLSWAVLEMGMEM-----DKVKQKYSILHVETFNSEKKRSGVLIRR 568 (1044)
Q Consensus 494 ~l~~~i~~n~~~~~~~~~~~~~~~~~~gsp~e~All~~a~~~~g~~~-----~~~~~~~~il~~~pF~s~rkrmsvvv~~ 568 (1044)
. ++.||+ .... ++ ...|||.|+|.+++..|.+..+- +...+..+|.+.+.|+|.-|||+|++..
T Consensus 523 v----lAscHs--Lv~l-e~----~lVGDPlEKA~l~~v~W~~~k~~~v~p~~~~~~~lkI~~ryhFsSaLKRmsvva~~ 591 (1160)
T KOG0209|consen 523 V----LASCHS--LVLL-ED----KLVGDPLEKATLEAVGWNLEKKNSVCPREGNGKKLKIIQRYHFSSALKRMSVVASH 591 (1160)
T ss_pred H----HHHHHH--HHHh-cC----cccCChHHHHHHHhcCcccccCcccCCCcCCCcccchhhhhhHHHHHHHHHhhhhc
Confidence 2 333433 2221 11 27899999999997643222111 0111246789999999999999999876
Q ss_pred cCC---CeEEEEecCcHHHHHHhcccccccCCeeecCChhhHHHHHHHHHHHHhcccceeeeeeeecCchhhcccchHHH
Q 001616 569 KAD---NTTHIHWKGAAEIILAMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAYNNDVKA 645 (1044)
Q Consensus 569 ~~~---~~~~~~~KGA~e~Il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~~A~k~l~~~~~~~~~~~~~ 645 (1044)
... .++.+.+|||||.|-++.. +..+.+++...+|+.+|.||+|++||++..- ......+.
T Consensus 592 ~~~g~s~k~~~aVKGAPEvi~~ml~--------------dvP~dY~~iYk~ytR~GsRVLALg~K~l~~~--~~~q~rd~ 655 (1160)
T KOG0209|consen 592 QGPGSSEKYFVAVKGAPEVIQEMLR--------------DVPKDYDEIYKRYTRQGSRVLALGYKPLGDM--MVSQVRDL 655 (1160)
T ss_pred ccCCCceEEEEEecCCHHHHHHHHH--------------hCchhHHHHHHHHhhccceEEEEeccccccc--chhhhhhh
Confidence 431 3588999999999988775 3456788999999999999999999999721 11112234
Q ss_pred hhhhcccCeEEEEEecccCCCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCccccc-----------c----
Q 001616 646 RQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQ-----------Q---- 710 (1044)
Q Consensus 646 ~~~~~e~~l~llG~vgi~D~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~~~~-----------~---- 710 (1044)
+++..|++|+|.|++.|.-|+|+|++++|+.+++++.+|+|+||||+.||.++|+++||..... .
T Consensus 656 ~Re~vEsdLtFaGFlif~CPlK~Ds~~~I~el~~SSH~vvMITGDnpLTAchVak~v~iv~k~~~vl~~~~~~~~~~~~w 735 (1160)
T KOG0209|consen 656 KREDVESDLTFAGFLIFSCPLKPDSKKTIKELNNSSHRVVMITGDNPLTACHVAKEVGIVEKPTLVLDLPEEGDGNQLEW 735 (1160)
T ss_pred hhhhhhhcceeeeeEEEeCCCCccHHHHHHHHhccCceEEEEeCCCccchheehheeeeeccCceeeccCccCCCceeeE
Confidence 5778899999999999999999999999999999999999999999999999999999986411 0
Q ss_pred ---------------------cccceeecchhhhcCCH-HHHHHHhccccEEeecChhhHHHHHHHHHhcCCEEEEEcCC
Q 001616 711 ---------------------VEKGEVVEGVEFRNYTD-EERIQKVDKIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDG 768 (1044)
Q Consensus 711 ---------------------~~~~~vi~g~~~~~~~~-~~~~~~~~~~~V~ar~sP~~K~~lV~~lq~~g~vVa~~GDG 768 (1044)
...+++++|..+..+.. +.+++.++++.||||+.|.||..++..|++.|++++|+|||
T Consensus 736 ~s~d~t~~lp~~p~~~~~~l~~~~dlcitG~~l~~l~~~~~l~~l~~hv~VfARvaP~QKE~ii~tlK~~Gy~TLMCGDG 815 (1160)
T KOG0209|consen 736 VSVDGTIVLPLKPGKKKTLLAETHDLCITGSALDHLQATDQLRRLIPHVWVFARVAPKQKEFIITTLKKLGYVTLMCGDG 815 (1160)
T ss_pred ecCCCceeecCCCCccchhhhhhhhhhcchhHHHHHhhhHHHHHhhhheeEEEeeChhhHHHHHHHHHhcCeEEEEecCC
Confidence 02345677888887654 45788999999999999999999999999999999999999
Q ss_pred cCCHHHHhhCCcceeeCCCchH----------------------------------------------------------
Q 001616 769 TNDAPALKEADVGLSMGIQGTE---------------------------------------------------------- 790 (1044)
Q Consensus 769 ~NDapaLk~AdVGiamg~~gt~---------------------------------------------------------- 790 (1044)
+||+.|||+||||||+=.+.-|
T Consensus 816 TNDVGALK~AhVGVALL~~~~e~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~e~l~~i~kdl 895 (1160)
T KOG0209|consen 816 TNDVGALKQAHVGVALLNNPEESKKDKEKRRKKKLKLEPAKQTIAANRQNSPRPPVPPAERHNPHAEKTRERLKKILKDL 895 (1160)
T ss_pred CcchhhhhhcccceehhcCChhhhhHHhhhhhhccccCchhhHHHhhhccCCCCCCCCccccChhHHHHHHHHHHHHHHH
Confidence 9999999999999997422110
Q ss_pred ------------HHhhccCEEEccCChhHHHHHHHHhHHHHHhHHHHHH-HHHHHHHHHHHHHHHHHHhcCCCchhHHHH
Q 001616 791 ------------VAKESSDIVILDDDFTSVATVLRWGRCVYTNIQKFIQ-FQLTVNVAALVINFIAAVSAGEVPLTAVQL 857 (1044)
Q Consensus 791 ------------vAk~aaDivl~dd~f~~I~~~i~~GR~~~~ni~k~i~-f~l~~nv~~~~~~~~~~~~~~~~pl~~~ql 857 (1044)
-|.-||.+.-.-.+.++|-++|+.|||..-+.-+.+. ..|-.-+.+.. .+.++.-..-++..|.
T Consensus 896 ee~~~~p~vKLGDASiAAPFTsK~asv~~v~~IIrQGRctLVtTlQMfKILALN~LisAYs---lSvlyldGVKfgD~Qa 972 (1160)
T KOG0209|consen 896 EEDKGDPLVKLGDASIAAPFTSKLASVSSVTHIIRQGRCTLVTTLQMFKILALNCLISAYS---LSVLYLDGVKFGDTQA 972 (1160)
T ss_pred hhcccCccccccccccccccccccchHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHH---HHHhhhcCceecchhH
Confidence 0111233333333677899999999999876544333 33322222221 2233333455666665
Q ss_pred HHHhhhhhHHHHHHhccCCCCcccccCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHhcccc----cCC------C
Q 001616 858 LWVNLIMDTLGALALATDRPTDELMQRPPVGRTEPLITNIMWRNLLSQALYQITILLILQFKGESI----FNV------S 927 (1044)
Q Consensus 858 L~~nli~d~l~alala~e~p~~~lm~~~P~~~~~~li~~~~~~~i~~~~~~q~~v~~~l~~~~~~~----~~~------~ 927 (1044)
..--+++ ....+.+...+|-+.|.+..|. .++++......+++|.+.+++.++++.-..... .+. +
T Consensus 973 TisGlLl-a~cFlfISrskPLetLSkeRP~---~nIFN~Y~i~svl~QFaVH~~tLvYi~~~a~~~~p~~~~vdl~~~F~ 1048 (1160)
T KOG0209|consen 973 TISGLLL-AACFLFISRSKPLETLSKERPL---PNIFNVYIILSVLLQFAVHIATLVYITGEAYKLEPPEEKVDLEEKFS 1048 (1160)
T ss_pred hHHHHHH-HHHHhheecCCchhhHhhcCCC---CCcchHHHHHHHHHHHHHHHHHhhhhHHHHHhcCCcccccChhcccC
Confidence 5544433 2345677789999999888884 357777777777777777776665543211111 111 2
Q ss_pred cccccchhhhHHHHHHHHH-HhhhcccccccccccccccHHHHHHHHHHHHHHHHHH----HHhhHhhccCCCChHHH--
Q 001616 928 PEVNDTLIFNTFVFCQVFN-EFNARKLEKRNVFKGIHKNKLFLGIIGITVVLQVVMV----EFLKKFADTERLNWQQW-- 1000 (1044)
Q Consensus 928 ~~~~~t~~f~~~v~~q~fn-~~n~r~~~~~~~f~~~~~n~~f~~~i~~~~~~qv~~v----~~~~~~f~~~~l~~~~w-- 1000 (1044)
+...+|.+|..-...|+.. .+|-+ ..++-+.+..|+.+++++++...+-+.++ +=++..|...+++-..-
T Consensus 1049 PsllNt~vyiisl~~QvsTFAVNY~---G~PF~Esl~eNK~l~y~ll~~~~~~~~l~tg~~peLn~~~~lV~mp~~fk~~ 1125 (1160)
T KOG0209|consen 1049 PSLLNTTVYIISLAQQVSTFAVNYQ---GRPFRESLRENKGLLYGLLGSAGVIIALATGSSPELNEKFELVDMPQDFKIK 1125 (1160)
T ss_pred hhhhhhHHHHHHHHHHHHHhhhhcc---CcchhhhhhhccchHHHHHHHHHHHHHHHhccChhHHhheeeecccHHHHHH
Confidence 4556777776666666643 34533 45666799999988888777665544443 23566788888763222
Q ss_pred --HHHHHHHHHHHHHHHHhhhcc
Q 001616 1001 --LACIAMAAFTWPIGWAVKFIP 1021 (1044)
Q Consensus 1001 --~~~i~~~~~~~~~~~~~k~i~ 1021 (1044)
.+.++--+++|.+..+.+++-
T Consensus 1126 ll~~l~lD~v~c~~~er~~~f~f 1148 (1160)
T KOG0209|consen 1126 LLAVLVLDFVLCYLVERVLKFFF 1148 (1160)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHc
Confidence 222233445677777777654
No 28
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=100.00 E-value=2.1e-74 Score=697.02 Aligned_cols=526 Identities=28% Similarity=0.421 Sum_probs=433.0
Q ss_pred HHHHHHHHHHhhccccCCCCccccchhHHHHHHHHHHHHhHHHHHHHHHHHHHhhcccCCceEEEEeCC-eEEEEeeccc
Q 001616 171 ILLVCAALSLGFGIKEHGAEEGWYEGGSIFVAVFLVIVVSAFSNFRQARQFDKLSKISNNIKVEVVREA-RRLQISIFDL 249 (1044)
Q Consensus 171 illv~a~lsl~~gi~~~g~~~~~~d~~~i~~~v~lv~~v~a~~~~~~~~~~~~l~~~~~~~~v~ViR~G-~~~~I~~~dL 249 (1044)
++.+++++++++| .|.++..|++.+++.-+++...+++.++..++|.+. ++..++|+|+| ++++|+.+||
T Consensus 4 l~~~~~~~~~~~~--------~~~~~~~i~~~~~~~~~i~~~~~~~~~~~l~~l~~~-~~~~~~v~r~~g~~~~i~~~~l 74 (556)
T TIGR01525 4 LMALATIAAYAMG--------LVLEGALLLFLFLLGETLEERAKGRASDALSALLAL-APSTARVLQGDGSEEEVPVEEL 74 (556)
T ss_pred HHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCEEEEEECCCeEEEEEHHHC
Confidence 3445556666665 477787777777777777778887888877787654 55689999995 9999999999
Q ss_pred ccCcEEEeCCCCeeeccEEEEecCceeeecCCCCCCCCceeecCCCCceeeecceEeeCceEEEEEEecccchhHHHHhh
Q 001616 250 VVGDIVFLKIGDQIPADGLFLDGHSLQVDESSMTGESDHVEVDSTNNPFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSS 329 (1044)
Q Consensus 250 vvGDIV~l~~Gd~VPADgill~g~~l~VDES~LTGEs~pv~k~~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~gki~~~ 329 (1044)
+|||+|.+++||+|||||++++|+. .||||+|||||.|+.|. .++.+|+||.+.+|.++++|+++|.+|+.|++.+.
T Consensus 75 ~~GDiv~v~~G~~iP~Dg~vi~g~~-~vdes~lTGEs~pv~k~--~g~~v~aGt~v~~g~~~~~v~~~g~~t~~~~i~~~ 151 (556)
T TIGR01525 75 QVGDIVIVRPGERIPVDGVVISGES-EVDESALTGESMPVEKK--EGDEVFAGTINGDGSLTIRVTKLGEDSTLAQIVKL 151 (556)
T ss_pred CCCCEEEECCCCEeccceEEEecce-EEeehhccCCCCCEecC--CcCEEeeceEECCceEEEEEEEecccCHHHHHHHH
Confidence 9999999999999999999999985 99999999999999998 57899999999999999999999999999999999
Q ss_pred cCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccccCCCCCCcchhHHHHHHHHHHHHHHH
Q 001616 330 ISSDSNERTPLQARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAAAVTIV 409 (1044)
Q Consensus 330 ~~~~~~~~tplq~~l~~la~~i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~il 409 (1044)
+.+...+++|+|+.+++++.++.++++++++++|++++. .+. . ..+..+++++
T Consensus 152 ~~~~~~~~~~~~~~~~~~a~~~~~~~l~~a~~~~~~~~~---~~~----------------------~--~~~~~~~~vl 204 (556)
T TIGR01525 152 VEEAQSSKAPIQRLADRIASYYVPAVLAIALLTFVVWLA---LGA----------------------L--GALYRALAVL 204 (556)
T ss_pred HHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hcc----------------------c--hHHHHHHHHH
Confidence 988888899999999999999999999999888877643 110 1 4567889999
Q ss_pred HHHhcchhHHHHHHHHHHHHHhhccccceeccchhhhcccCeeEEeeCcccccccCceEEEEEEeccccccccccccCCh
Q 001616 410 VVAIPEGLPLAVTLTLAYSMKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKFWLGQESIVQETYCKIAS 489 (1044)
Q Consensus 410 vvavP~gLplavtl~la~~~~~m~k~~~lvr~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~ 489 (1044)
+++|||+||++++++++.++++|.++|+++|+++++|+||++|++|||||||||+|+|+|.+++..+... .++
T Consensus 205 v~~~P~al~l~~~~~~~~~~~~~~~~gilvk~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~~~-------~~~ 277 (556)
T TIGR01525 205 VVACPCALGLATPVAILVAIGVAARRGILIKGGDALEKLAKVKTVVFDKTGTLTTGKPTVVDVEPLDDAS-------ISE 277 (556)
T ss_pred hhccccchhehhHHHHHHHHHHHHHCCceecCchHHHHhhcCCEEEEeCCCCCcCCceEEEEEEecCCCC-------ccH
Confidence 9999999999999999999999999999999999999999999999999999999999999987643211 001
Q ss_pred HHHHHHHHHHhhcCCccccccCCCCCcceecCChhHHHHHHHHHHHcCCChHHhhhcccEEEEecCCCCCceEEEEEEec
Q 001616 490 SIRDLFHQGVGLNTTGSVSKLKPGSSVAEFSGSPTEKAVLSWAVLEMGMEMDKVKQKYSILHVETFNSEKKRSGVLIRRK 569 (1044)
Q Consensus 490 ~~~~~l~~~i~~n~~~~~~~~~~~~~~~~~~gsp~e~All~~a~~~~g~~~~~~~~~~~il~~~pF~s~rkrmsvvv~~~ 569 (1044)
.+++..+.. .+ ..+.||+++|+++++. +.|.+... . ++ ...+
T Consensus 278 --~~~l~~a~~------~e---------~~~~hp~~~Ai~~~~~-~~~~~~~~--~-~~-~~~~---------------- 319 (556)
T TIGR01525 278 --EELLALAAA------LE---------QSSSHPLARAIVRYAK-KRGLELPK--Q-ED-VEEV---------------- 319 (556)
T ss_pred --HHHHHHHHH------Hh---------ccCCChHHHHHHHHHH-hcCCCccc--c-cC-eeEe----------------
Confidence 122221111 11 1256999999999997 55554321 0 00 0111
Q ss_pred CCCeEEEEecCcHHHHHHhcccccccCCeeecCChhhHHHHHHHHHHHHhcccceeeeeeeecCchhhcccchHHHhhhh
Q 001616 570 ADNTTHIHWKGAAEIILAMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAYNNDVKARQRL 649 (1044)
Q Consensus 570 ~~~~~~~~~KGA~e~Il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~~A~k~l~~~~~~~~~~~~~~~~~ 649 (1044)
.+..+..++||+++..+..|+.. ..++ ....++++.++.++.+|+|++.++.
T Consensus 320 ~~~gi~~~~~g~~~~~lg~~~~~-~~~~-------~~~~~~~~~~~~~~~~g~~~~~v~~-------------------- 371 (556)
T TIGR01525 320 PGKGVEATVDGQEEVRIGNPRLL-ELAA-------EPISASPDLLNEGESQGKTVVFVAV-------------------- 371 (556)
T ss_pred cCCeEEEEECCeeEEEEecHHHH-hhcC-------CCchhhHHHHHHHhhCCcEEEEEEE--------------------
Confidence 01113333444434444444321 1111 1112234556778899999999886
Q ss_pred cccCeEEEEEecccCCCchhHHHHHHHHHhcC-CEEEEEcCCCHHHHHHHHHHcCCcccccccccceeecchhhhcCCHH
Q 001616 650 KEEGLTLLGIVGIKDPCRPGVQKAVEACQSAG-VEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDE 728 (1044)
Q Consensus 650 ~e~~l~llG~vgi~D~lR~~v~~aI~~l~~aG-I~v~mlTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~ 728 (1044)
|.+++|.+.++|++|||++++++.|+++| +++.|+|||+..++.++++++|+..
T Consensus 372 ---~~~~~g~i~~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~~---------------------- 426 (556)
T TIGR01525 372 ---DGELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGIDE---------------------- 426 (556)
T ss_pred ---CCEEEEEEEecccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCCe----------------------
Confidence 34799999999999999999999999999 9999999999999999999999954
Q ss_pred HHHHHhccccEEeecChhhHHHHHHHHHhcCCEEEEEcCCcCCHHHHhhCCcceeeCCCchHHHhhccCEEEccCChhHH
Q 001616 729 ERIQKVDKIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSV 808 (1044)
Q Consensus 729 ~~~~~~~~~~V~ar~sP~~K~~lV~~lq~~g~vVa~~GDG~NDapaLk~AdVGiamg~~gt~vAk~aaDivl~dd~f~~I 808 (1044)
+|+++.|++|..+++.+++.++.|+|+|||.||+||+++||||++|| .+++.+++.||+++.+++++.+
T Consensus 427 ----------~f~~~~p~~K~~~v~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g-~~~~~~~~~Ad~vi~~~~~~~l 495 (556)
T TIGR01525 427 ----------VHAELLPEDKLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIAMG-AGSDVAIEAADIVLLNDDLSSL 495 (556)
T ss_pred ----------eeccCCHHHHHHHHHHHHHcCCEEEEEECChhHHHHHhhCCEeEEeC-CCCHHHHHhCCEEEeCCCHHHH
Confidence 78999999999999999999999999999999999999999999999 8999999999999999999999
Q ss_pred HHHHHHhHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Q 001616 809 ATVLRWGRCVYTNIQKFIQFQLTVNVAALVINFIAA 844 (1044)
Q Consensus 809 ~~~i~~GR~~~~ni~k~i~f~l~~nv~~~~~~~~~~ 844 (1044)
..++++||++++||++++.|++++|++++++++.+.
T Consensus 496 ~~~i~~~r~~~~~i~~nl~~a~~~N~~~i~~a~~g~ 531 (556)
T TIGR01525 496 PTAIDLSRKTRRIIKQNLAWALGYNLVAIPLAAGGL 531 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999988777554
No 29
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=100.00 E-value=2.9e-73 Score=682.95 Aligned_cols=503 Identities=25% Similarity=0.378 Sum_probs=422.7
Q ss_pred HHHHHHHHHHhhccccCCCCccccchhHHHHHHHHHHHHhHHHHHHHHHHHHHhhcccCCceEEEEeCCeEEEEeecccc
Q 001616 171 ILLVCAALSLGFGIKEHGAEEGWYEGGSIFVAVFLVIVVSAFSNFRQARQFDKLSKISNNIKVEVVREARRLQISIFDLV 250 (1044)
Q Consensus 171 illv~a~lsl~~gi~~~g~~~~~~d~~~i~~~v~lv~~v~a~~~~~~~~~~~~l~~~~~~~~v~ViR~G~~~~I~~~dLv 250 (1044)
++.+++++++++| .|+|+..|++.+++...++.+.+++.++..++|.+. ++.+++|+|||++++|++++|+
T Consensus 4 l~~~a~~~~~~~~--------~~~~~~~i~~~~~~~~~l~~~~~~~a~~~l~~l~~~-~~~~~~v~r~g~~~~i~~~~l~ 74 (536)
T TIGR01512 4 LMALAALGAVAIG--------EYLEGALLLLLFSIGETLEEYASGRARRALKALMEL-APDTARVLRGGSLEEVAVEELK 74 (536)
T ss_pred HHHHHHHHHHHHh--------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCEEEEEECCEEEEEEHHHCC
Confidence 4566777777776 589998877777777777777777877777777654 5678999999999999999999
Q ss_pred cCcEEEeCCCCeeeccEEEEecCceeeecCCCCCCCCceeecCCCCceeeecceEeeCceEEEEEEecccchhHHHHhhc
Q 001616 251 VGDIVFLKIGDQIPADGLFLDGHSLQVDESSMTGESDHVEVDSTNNPFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSSI 330 (1044)
Q Consensus 251 vGDIV~l~~Gd~VPADgill~g~~l~VDES~LTGEs~pv~k~~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~gki~~~~ 330 (1044)
|||+|.+++||+|||||++++|+. .||||+|||||.|+.|. .++.+|+||.+.+|.++++|+++|.+|++|++.+.+
T Consensus 75 ~GDiv~v~~G~~iP~Dg~ii~g~~-~vdes~lTGEs~pv~k~--~g~~v~aGt~v~~G~~~~~V~~~g~~t~~~~i~~~~ 151 (536)
T TIGR01512 75 VGDVVVVKPGERVPVDGVVLSGTS-TVDESALTGESVPVEKA--PGDEVFAGAINLDGVLTIVVTKLPADSTIAKIVNLV 151 (536)
T ss_pred CCCEEEEcCCCEeecceEEEeCcE-EEEecccCCCCCcEEeC--CCCEEEeeeEECCceEEEEEEEeccccHHHHHHHHH
Confidence 999999999999999999999986 99999999999999998 578999999999999999999999999999999999
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccccCCCCCCcchhHHHHHHHHHHHHHHHH
Q 001616 331 SSDSNERTPLQARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAAAVTIVV 410 (1044)
Q Consensus 331 ~~~~~~~tplq~~l~~la~~i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~ilv 410 (1044)
.+...+++|+|+.+++++.++.++.+++++++++++.. ... | . ..+..++++++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~---------~------------~--~~~~~~~svlv 205 (536)
T TIGR01512 152 EEAQSRKAKTQRFIDRFARYYTPVVLAIALAIWLVPGL---LKR---------W------------P--FWVYRALVLLV 205 (536)
T ss_pred HHHhhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hcc---------c------------H--HHHHHHHHHHh
Confidence 88888899999999999999999988888777766431 110 0 1 26777899999
Q ss_pred HHhcchhHHHHHHHHHHHHHhhccccceeccchhhhcccCeeEEeeCcccccccCceEEEEEEeccccccccccccCChH
Q 001616 411 VAIPEGLPLAVTLTLAYSMKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKFWLGQESIVQETYCKIASS 490 (1044)
Q Consensus 411 vavP~gLplavtl~la~~~~~m~k~~~lvr~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~ 490 (1044)
++|||+||++++++++.++.+|.++|+++|+++++|++|++|++|||||||||+|+|+|.+++..
T Consensus 206 ~~~P~aL~la~~~~~~~~~~~~~k~gilik~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~--------------- 270 (536)
T TIGR01512 206 VASPCALVISAPAAYLSAISAAARHGILIKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVVPA--------------- 270 (536)
T ss_pred hcCccccccchHHHHHHHHHHHHHCCeEEcCcHHHHhhcCCCEEEECCCCCCcCCceEEEEeeHH---------------
Confidence 99999999999999999999999999999999999999999999999999999999999987531
Q ss_pred HHHHHHHHHhhcCCccccccCCCCCcceecCChhHHHHHHHHHHHcCCChHHhhhcccEEEEecCCCCCce--EEEEEEe
Q 001616 491 IRDLFHQGVGLNTTGSVSKLKPGSSVAEFSGSPTEKAVLSWAVLEMGMEMDKVKQKYSILHVETFNSEKKR--SGVLIRR 568 (1044)
Q Consensus 491 ~~~~l~~~i~~n~~~~~~~~~~~~~~~~~~gsp~e~All~~a~~~~g~~~~~~~~~~~il~~~pF~s~rkr--msvvv~~ 568 (1044)
+++..+.++ + ..+.||.++|+++++. +.+ ||++.+.. .++....
T Consensus 271 --~~l~~a~~~------e---------~~~~hp~~~Ai~~~~~-~~~----------------~~~~~~~~~g~gi~~~~ 316 (536)
T TIGR01512 271 --EVLRLAAAA------E---------QASSHPLARAIVDYAR-KRE----------------NVESVEEVPGEGVRAVV 316 (536)
T ss_pred --HHHHHHHHH------h---------ccCCCcHHHHHHHHHH-hcC----------------CCcceEEecCCeEEEEE
Confidence 222222211 1 1256999999999987 432 22222211 1222222
Q ss_pred cCCCeEEEEecCcHHHHHHhcccccccCCeeecCChhhHHHHHHHHHHHHhcccceeeeeeeecCchhhcccchHHHhhh
Q 001616 569 KADNTTHIHWKGAAEIILAMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAYNNDVKARQR 648 (1044)
Q Consensus 569 ~~~~~~~~~~KGA~e~Il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~~A~k~l~~~~~~~~~~~~~~~~ 648 (1044)
+|.++ ..|+++.+.+.. + ..+..+|.+++.++.
T Consensus 317 -~g~~~---~ig~~~~~~~~~------------~------------~~~~~~~~~~~~v~~------------------- 349 (536)
T TIGR01512 317 -DGGEV---RIGNPRSLEAAV------------G------------ARPESAGKTIVHVAR------------------- 349 (536)
T ss_pred -CCeEE---EEcCHHHHhhcC------------C------------cchhhCCCeEEEEEE-------------------
Confidence 34333 348876553211 0 034456666655543
Q ss_pred hcccCeEEEEEecccCCCchhHHHHHHHHHhcCC-EEEEEcCCCHHHHHHHHHHcCCcccccccccceeecchhhhcCCH
Q 001616 649 LKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGV-EIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTD 727 (1044)
Q Consensus 649 ~~e~~l~llG~vgi~D~lR~~v~~aI~~l~~aGI-~v~mlTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~g~~~~~~~~ 727 (1044)
|..++|.+.++|++|||++++|+.|+++|+ ++.|+|||+..+|.++++++||..
T Consensus 350 ----~~~~~g~i~~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~--------------------- 404 (536)
T TIGR01512 350 ----DGTYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDE--------------------- 404 (536)
T ss_pred ----CCEEEEEEEEeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChh---------------------
Confidence 458999999999999999999999999999 999999999999999999999964
Q ss_pred HHHHHHhccccEEeecChhhHHHHHHHHHhcCCEEEEEcCCcCCHHHHhhCCcceeeCCCchHHHhhccCEEEccCChhH
Q 001616 728 EERIQKVDKIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTS 807 (1044)
Q Consensus 728 ~~~~~~~~~~~V~ar~sP~~K~~lV~~lq~~g~vVa~~GDG~NDapaLk~AdVGiamg~~gt~vAk~aaDivl~dd~f~~ 807 (1044)
+|++..|++|..+++.+++.++.|+|+|||.||+||+++||+|++||.+|++.++++||+++++++++.
T Consensus 405 -----------~f~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~~ad~vl~~~~l~~ 473 (536)
T TIGR01512 405 -----------VHAELLPEDKLEIVKELREKYGPVAMVGDGINDAPALAAADVGIAMGASGSDVAIETADVVLLNDDLSR 473 (536)
T ss_pred -----------hhhccCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHhCCEEEEeCCCccHHHHHhCCEEEECCCHHH
Confidence 688999999999999999999999999999999999999999999997789999999999999999999
Q ss_pred HHHHHHHhHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Q 001616 808 VATVLRWGRCVYTNIQKFIQFQLTVNVAALVINFIA 843 (1044)
Q Consensus 808 I~~~i~~GR~~~~ni~k~i~f~l~~nv~~~~~~~~~ 843 (1044)
+.+++++||++++||++++.|++.+|++++++++++
T Consensus 474 l~~~i~~~r~~~~~i~~nl~~a~~~n~~~i~~a~~G 509 (536)
T TIGR01512 474 LPQAIRLARRTRRIVKQNVVIALGIILLLILLALFG 509 (536)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999998888765
No 30
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=100.00 E-value=8.9e-72 Score=672.20 Aligned_cols=499 Identities=28% Similarity=0.414 Sum_probs=410.2
Q ss_pred ccccchhHHHHHHHHH-HHHhHHHHHHHHHHHHHhhcccCCceEEEEeC-CeEEEEeecccccCcEEEeCCCCeeeccEE
Q 001616 191 EGWYEGGSIFVAVFLV-IVVSAFSNFRQARQFDKLSKISNNIKVEVVRE-ARRLQISIFDLVVGDIVFLKIGDQIPADGL 268 (1044)
Q Consensus 191 ~~~~d~~~i~~~v~lv-~~v~a~~~~~~~~~~~~l~~~~~~~~v~ViR~-G~~~~I~~~dLvvGDIV~l~~Gd~VPADgi 268 (1044)
.+|+++.++++.+++. -.++....++.++..++|.+. .+.+++|+|+ |++++|++++|+|||+|.+++||+|||||+
T Consensus 51 ~~~~~~~~~i~~~~~~g~~le~~~~~~a~~~~~~L~~~-~p~~a~~~~~~~~~~~v~~~~l~~GDii~v~~Ge~iP~Dg~ 129 (562)
T TIGR01511 51 HTFFDASAMLITFILLGRWLEMLAKGRASDALSKLAKL-QPSTATLLTKDGSIEEVPVALLQPGDIVKVLPGEKIPVDGT 129 (562)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEecCceE
Confidence 4688887766554433 345555555566666666544 4568888885 677999999999999999999999999999
Q ss_pred EEecCceeeecCCCCCCCCceeecCCCCceeeecceEeeCceEEEEEEecccchhHHHHhhcCCCCCCCChhHHHHHHHH
Q 001616 269 FLDGHSLQVDESSMTGESDHVEVDSTNNPFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSSISSDSNERTPLQARLDKLT 348 (1044)
Q Consensus 269 ll~g~~l~VDES~LTGEs~pv~k~~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~gki~~~~~~~~~~~tplq~~l~~la 348 (1044)
+++|++ .||||+|||||.|+.|. .++.+|+||.+.+|.+++.|+++|.+|..||+.+.+.+...+++|+|+.+++++
T Consensus 130 v~~g~~-~vdes~lTGEs~pv~k~--~gd~V~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~v~~a~~~k~~~~~~~d~~a 206 (562)
T TIGR01511 130 VIEGES-EVDESLVTGESLPVPKK--VGDPVIAGTVNGTGSLVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVA 206 (562)
T ss_pred EEECce-EEehHhhcCCCCcEEcC--CCCEEEeeeEECCceEEEEEEEecCCChHHHHHHHHHHHHhcCCchHHHHHHHH
Confidence 999986 89999999999999998 578999999999999999999999999999999999988889999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccccCCCCCCcchhHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHH
Q 001616 349 STIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAAAVTIVVVAIPEGLPLAVTLTLAYS 428 (1044)
Q Consensus 349 ~~i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~ilvvavP~gLplavtl~la~~ 428 (1044)
.++.++.++++++++++|. ..+..++++++++|||+|++++|+++..+
T Consensus 207 ~~~~~~v~~~a~~~~~~~~--------------------------------~~~~~~~svlvvacPcaL~la~p~a~~~~ 254 (562)
T TIGR01511 207 GYFVPVVIAIALITFVIWL--------------------------------FALEFAVTVLIIACPCALGLATPTVIAVA 254 (562)
T ss_pred HHHHHHHHHHHHHHHHHHH--------------------------------HHHHHHHHHHHHhccchhhhHHHHHHHHH
Confidence 9999988888887776642 24567899999999999999999999999
Q ss_pred HHhhccccceeccchhhhcccCeeEEeeCcccccccCceEEEEEEeccccccccccccCChHHHHHHHHHHhhcCCcccc
Q 001616 429 MKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKFWLGQESIVQETYCKIASSIRDLFHQGVGLNTTGSVS 508 (1044)
Q Consensus 429 ~~~m~k~~~lvr~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~n~~~~~~ 508 (1044)
+.+++++|+++|+.+++|+|+++|+||||||||||+|+|+|+++...+.. ++ .+++..+.++.
T Consensus 255 ~~~aa~~gIlik~~~~lE~l~~v~~i~fDKTGTLT~g~~~v~~i~~~~~~---------~~--~~~l~~aa~~e------ 317 (562)
T TIGR01511 255 TGLAAKNGVLIKDGDALERAANIDTVVFDKTGTLTQGKPTVTDVHVFGDR---------DR--TELLALAAALE------ 317 (562)
T ss_pred HHHHHHCCeEEcChHHHHHhhCCCEEEECCCCCCcCCCEEEEEEecCCCC---------CH--HHHHHHHHHHh------
Confidence 99999999999999999999999999999999999999999998653321 11 12222221111
Q ss_pred ccCCCCCcceecCChhHHHHHHHHHHHcCCChHHhhhcccEEEEecCCCCCceEEEEEEecCCCeEEEEecCcHHHHHHh
Q 001616 509 KLKPGSSVAEFSGSPTEKAVLSWAVLEMGMEMDKVKQKYSILHVETFNSEKKRSGVLIRRKADNTTHIHWKGAAEIILAM 588 (1044)
Q Consensus 509 ~~~~~~~~~~~~gsp~e~All~~a~~~~g~~~~~~~~~~~il~~~pF~s~rkrmsvvv~~~~~~~~~~~~KGA~e~Il~~ 588 (1044)
..+.||.++|+++++. +.+.+.... .+|... ...++.... ++.+ +..|+++.+.+.
T Consensus 318 ---------~~s~HPia~Ai~~~~~-~~~~~~~~~---------~~~~~~-~g~Gi~~~~-~g~~---~~iG~~~~~~~~ 373 (562)
T TIGR01511 318 ---------AGSEHPLAKAIVSYAK-EKGITLVEV---------SDFKAI-PGIGVEGTV-EGTK---IQLGNEKLLGEN 373 (562)
T ss_pred ---------ccCCChHHHHHHHHHH-hcCCCcCCC---------CCeEEE-CCceEEEEE-CCEE---EEEECHHHHHhC
Confidence 1246999999999987 555432111 111111 112333332 3332 345888876431
Q ss_pred cccccccCCeeecCChhhHHHHHHHHHHHHhcccceeeeeeeecCchhhcccchHHHhhhhcccCeEEEEEecccCCCch
Q 001616 589 CSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAYNNDVKARQRLKEEGLTLLGIVGIKDPCRP 668 (1044)
Q Consensus 589 c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~~A~k~l~~~~~~~~~~~~~~~~~~e~~l~llG~vgi~D~lR~ 668 (1044)
|. .++ ++.++|.+++.++. |.+++|+++++|++||
T Consensus 374 --------~~--~~~------------~~~~~g~~~~~~~~-----------------------~~~~~g~~~~~d~l~~ 408 (562)
T TIGR01511 374 --------AI--KID------------GKAEQGSTSVLVAV-----------------------NGELAGVFALEDQLRP 408 (562)
T ss_pred --------CC--CCC------------hhhhCCCEEEEEEE-----------------------CCEEEEEEEecccccH
Confidence 11 011 12357878776654 5589999999999999
Q ss_pred hHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCcccccccccceeecchhhhcCCHHHHHHHhccccEEeecChhhH
Q 001616 669 GVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPFDK 748 (1044)
Q Consensus 669 ~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~ar~sP~~K 748 (1044)
|++++|+.|++.|+++.|+|||+..+|.++|+++||. ++++..|++|
T Consensus 409 ~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~---------------------------------~~~~~~p~~K 455 (562)
T TIGR01511 409 EAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN---------------------------------VRAEVLPDDK 455 (562)
T ss_pred HHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc---------------------------------EEccCChHHH
Confidence 9999999999999999999999999999999999983 5788899999
Q ss_pred HHHHHHHHhcCCEEEEEcCCcCCHHHHhhCCcceeeCCCchHHHhhccCEEEccCChhHHHHHHHHhHHHHHhHHHHHHH
Q 001616 749 LLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLRWGRCVYTNIQKFIQF 828 (1044)
Q Consensus 749 ~~lV~~lq~~g~vVa~~GDG~NDapaLk~AdVGiamg~~gt~vAk~aaDivl~dd~f~~I~~~i~~GR~~~~ni~k~i~f 828 (1044)
.++++.+++.++.|+|+|||.||+||+++||||++|| .|++.++++||++++++++..+..++++||+++++|++++.|
T Consensus 456 ~~~v~~l~~~~~~v~~VGDg~nD~~al~~A~vgia~g-~g~~~a~~~Advvl~~~~l~~l~~~i~lsr~~~~~i~qn~~~ 534 (562)
T TIGR01511 456 AALIKELQEKGRVVAMVGDGINDAPALAQADVGIAIG-AGTDVAIEAADVVLMRNDLNDVATAIDLSRKTLRRIKQNLLW 534 (562)
T ss_pred HHHHHHHHHcCCEEEEEeCCCccHHHHhhCCEEEEeC-CcCHHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999 799999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHH
Q 001616 829 QLTVNVAALVINFIAAV 845 (1044)
Q Consensus 829 ~l~~nv~~~~~~~~~~~ 845 (1044)
++.+|++++++++.+.+
T Consensus 535 a~~~n~~~i~la~~~~~ 551 (562)
T TIGR01511 535 AFGYNVIAIPIAAGVLY 551 (562)
T ss_pred HHHHHHHHHHHHHhhhh
Confidence 99999998887775443
No 31
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.9e-73 Score=661.79 Aligned_cols=564 Identities=24% Similarity=0.338 Sum_probs=445.9
Q ss_pred CCcHHHHHHHHhhhhH---HHHHHHHHHHHHhhcccc------CCCCccccchhHHHHHHHHHHHHhHHHHHHHHHH---
Q 001616 153 PKGLLHFVLEAFKDTT---ILILLVCAALSLGFGIKE------HGAEEGWYEGGSIFVAVFLVIVVSAFSNFRQARQ--- 220 (1044)
Q Consensus 153 ~~~~~~~~~~~~~~~~---~~illv~a~lsl~~gi~~------~g~~~~~~d~~~i~~~v~lv~~v~a~~~~~~~~~--- 220 (1044)
+.+|+.-.|.++++.. ..+..+++..++++++.. ...+..++|...+++.++.+ .+|.+.+.
T Consensus 291 G~~fy~~A~ksL~~g~~nMdvLv~L~t~aay~~S~~~~~~~~~~~~~~tfFdt~~MLi~fi~l------gr~LE~~Ak~k 364 (951)
T KOG0207|consen 291 GRPFYLAAYKSLKRGSANMDVLVVLGTTAAYFYSIFSLLAAVVFDSPPTFFDTSPMLITFITL------GRWLESLAKGK 364 (951)
T ss_pred ceeeHHHHHHHHhcCCCCceeehhhHHHHHHHHHHHHHHHHHHccCcchhccccHHHHHHHHH------HHHHHHHhhcc
Confidence 4566666677766542 222333333333333210 11234567776666655544 55555444
Q ss_pred ----HHHhhcccCCceEEEEeCCe-EEEEeecccccCcEEEeCCCCeeeccEEEEecCceeeecCCCCCCCCceeecCCC
Q 001616 221 ----FDKLSKISNNIKVEVVREAR-RLQISIFDLVVGDIVFLKIGDQIPADGLFLDGHSLQVDESSMTGESDHVEVDSTN 295 (1044)
Q Consensus 221 ----~~~l~~~~~~~~v~ViR~G~-~~~I~~~dLvvGDIV~l~~Gd~VPADgill~g~~l~VDES~LTGEs~pv~k~~~~ 295 (1044)
..+|-.. .+.++.++-+|+ ..+|+++.|.+||+|.+.||++||+||++++|++ .||||++|||+.||.|. .
T Consensus 365 ts~alskLmsl-~p~~a~ii~~g~~e~eI~v~lvq~gdivkV~pG~kiPvDG~Vv~Gss-~VDEs~iTGEs~PV~Kk--~ 440 (951)
T KOG0207|consen 365 TSEALSKLMSL-APSKATIIEDGSEEKEIPVDLVQVGDIVKVKPGEKIPVDGVVVDGSS-EVDESLITGESMPVPKK--K 440 (951)
T ss_pred chHHHHHHhhc-CcccceEeecCCcceEeeeeeeccCCEEEECCCCccccccEEEeCce-eechhhccCCceecccC--C
Confidence 3344333 456888899886 8999999999999999999999999999999998 99999999999999998 6
Q ss_pred CceeeecceEeeCceEEEEEEecccchhHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 001616 296 NPFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSSISSDSNERTPLQARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNT 375 (1044)
Q Consensus 296 ~~~l~sGt~v~~G~~~~~V~~vG~~T~~gki~~~~~~~~~~~tplq~~l~~la~~i~~~~l~~a~l~~iv~~~~~~~~~~ 375 (1044)
+..+.+||.+.+|...+.++++|.+|.+++|.+++.+++..++|+|+..|+++.++.++.+++++++|++|++..+....
T Consensus 441 gs~ViaGsiN~nG~l~VkaT~~g~dttla~IvkLVEEAQ~sKapiQq~aDkia~yFvP~Vi~lS~~t~~~w~~~g~~~~~ 520 (951)
T KOG0207|consen 441 GSTVIAGSINLNGTLLVKATKVGGDTTLAQIVKLVEEAQLSKAPIQQLADKIAGYFVPVVIVLSLATFVVWILIGKIVFK 520 (951)
T ss_pred CCeeeeeeecCCceEEEEEEeccccchHHHHHHHHHHHHcccchHHHHHHHhhhcCCchhhHHHHHHHHHHHHHcccccc
Confidence 88999999999999999999999999999999999999999999999999999999999999999999998653322110
Q ss_pred CCCCCccccCCCCCCcchhHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhhccccceeccchhhhcccCeeEEe
Q 001616 376 KGENGIKEYNGSNTDIDDVFNAVVSIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMTDQAMVRKLPACETMGSATVIC 455 (1044)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~ilvvavP~gLplavtl~la~~~~~m~k~~~lvr~~~a~E~Lg~v~~Ic 455 (1044)
. ... ++..+...|..+++++++||||+|.||.|.+...+...-+++|+|+|..+++|.+.+++++.
T Consensus 521 ~----~~~----------~~~~~~~a~~~aisVlviACPCaLgLATPtAvmvatgvgA~nGvLIKGge~LE~~hkv~tVv 586 (951)
T KOG0207|consen 521 Y----PRS----------FFDAFSHAFQLAISVLVIACPCALGLATPTAVMVATGVGATNGVLIKGGEALEKAHKVKTVV 586 (951)
T ss_pred C----cch----------hhHHHHHHHHhhheEEEEECchhhhcCCceEEEEEechhhhcceEEcCcHHHHHHhcCCEEE
Confidence 0 111 12367788999999999999999999999999999999999999999999999999999999
Q ss_pred eCcccccccCceEEEEEEeccccccccccccCChHHHHHHHHHHhhcCCccccccCCCCCcceecCChhHHHHHHHHHHH
Q 001616 456 TDKTGTLTLNQMKVTKFWLGQESIVQETYCKIASSIRDLFHQGVGLNTTGSVSKLKPGSSVAEFSGSPTEKAVLSWAVLE 535 (1044)
Q Consensus 456 ~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~n~~~~~~~~~~~~~~~~~~gsp~e~All~~a~~~ 535 (1044)
||||||||+|+++|+++....+... ..+.+.-..+ .+ .-+.||..+|+++||+ +
T Consensus 587 FDKTGTLT~G~~~V~~~~~~~~~~~----------~~e~l~~v~a------~E---------s~SeHPig~AIv~yak-~ 640 (951)
T KOG0207|consen 587 FDKTGTLTEGKPTVVDFKSLSNPIS----------LKEALALVAA------ME---------SGSEHPIGKAIVDYAK-E 640 (951)
T ss_pred EcCCCceecceEEEEEEEecCCccc----------HHHHHHHHHH------Hh---------cCCcCchHHHHHHHHH-h
Confidence 9999999999999999877554311 1122211111 01 1256999999999998 4
Q ss_pred cCCChHHhhhcccEEEEecCCCCCceEEEEEEecCCCeEEEEecCcHHHHHHhcccccccCCeeecCChhhHHHHHHHHH
Q 001616 536 MGMEMDKVKQKYSILHVETFNSEKKRSGVLIRRKADNTTHIHWKGAAEIILAMCSHYYESNGVIKSMDGNGRSQMENIIH 615 (1044)
Q Consensus 536 ~g~~~~~~~~~~~il~~~pF~s~rkrmsvvv~~~~~~~~~~~~KGA~e~Il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~ 615 (1044)
..... ..-.++....|.-+.+...+.+ +++++ +-|.-+.+... |.. ..+.+++..+
T Consensus 641 ~~~~~----~~~~~~~~~~~pg~g~~~~~~~---~~~~i---~iGN~~~~~r~--------~~~------~~~~i~~~~~ 696 (951)
T KOG0207|consen 641 KLVEP----NPEGVLSFEYFPGEGIYVTVTV---DGNEV---LIGNKEWMSRN--------GCS------IPDDILDALT 696 (951)
T ss_pred ccccc----CccccceeecccCCCcccceEE---eeeEE---eechHHHHHhc--------CCC------CchhHHHhhh
Confidence 44111 1111222223333322212222 23333 34887777542 211 1233677777
Q ss_pred HHHhcccceeeeeeeecCchhhcccchHHHhhhhcccCeEEEEEecccCCCchhHHHHHHHHHhcCCEEEEEcCCCHHHH
Q 001616 616 GMAASSLRCIAFAYKQVSEEETAYNNDVKARQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTA 695 (1044)
Q Consensus 616 ~~a~~glR~l~~A~k~l~~~~~~~~~~~~~~~~~~e~~l~llG~vgi~D~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA 695 (1044)
+....|..+.+++. |-+++|+++++|++|||+..+|+.||+.||++.|+||||..||
T Consensus 697 ~~e~~g~tvv~v~v-----------------------n~~l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA 753 (951)
T KOG0207|consen 697 ESERKGQTVVYVAV-----------------------NGQLVGVFALEDQVRPDAALAVAELKSMGIKVVMLTGDNDAAA 753 (951)
T ss_pred hHhhcCceEEEEEE-----------------------CCEEEEEEEeccccchhHHHHHHHHHhcCceEEEEcCCCHHHH
Confidence 77888988888887 4479999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCcccccccccceeecchhhhcCCHHHHHHHhccccEEeecChhhHHHHHHHHHhcCCEEEEEcCCcCCHHHH
Q 001616 696 KAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPAL 775 (1044)
Q Consensus 696 ~aIA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~ar~sP~~K~~lV~~lq~~g~vVa~~GDG~NDapaL 775 (1044)
+++|+++||.. |+|...|+||.+.|+.+|++|+.|||+|||+||+|||
T Consensus 754 ~svA~~VGi~~--------------------------------V~aev~P~~K~~~Ik~lq~~~~~VaMVGDGINDaPAL 801 (951)
T KOG0207|consen 754 RSVAQQVGIDN--------------------------------VYAEVLPEQKAEKIKEIQKNGGPVAMVGDGINDAPAL 801 (951)
T ss_pred HHHHHhhCcce--------------------------------EEeccCchhhHHHHHHHHhcCCcEEEEeCCCCccHHH
Confidence 99999999654 9999999999999999999999999999999999999
Q ss_pred hhCCcceeeCCCchHHHhhccCEEEccCChhHHHHHHHHhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 001616 776 KEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLRWGRCVYTNIQKFIQFQLTVNVAALVINFIAAVS 846 (1044)
Q Consensus 776 k~AdVGiamg~~gt~vAk~aaDivl~dd~f~~I~~~i~~GR~~~~ni~k~i~f~l~~nv~~~~~~~~~~~~ 846 (1044)
.+|||||+|| .|+++|.|+|||||+.+|+..++.++..+|+...|||.++.|.++||+++++++....+.
T Consensus 802 A~AdVGIaig-~gs~vAieaADIVLmrn~L~~v~~ai~LSrkt~~rIk~N~~~A~~yn~~~IpIAagvF~P 871 (951)
T KOG0207|consen 802 AQADVGIAIG-AGSDVAIEAADIVLMRNDLRDVPFAIDLSRKTVKRIKLNFVWALIYNLVGIPIAAGVFAP 871 (951)
T ss_pred Hhhccceeec-cccHHHHhhCCEEEEccchhhhHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhheecccC
Confidence 9999999999 789999999999999999999999999999999999999999999999998887654443
No 32
>PRK10671 copA copper exporting ATPase; Provisional
Probab=100.00 E-value=3.8e-71 Score=697.14 Aligned_cols=509 Identities=25% Similarity=0.358 Sum_probs=419.7
Q ss_pred cccchhHHHHHH-HHHHHHhHHHHHHHHHHHHHhhcccCCceEEEEeCCeEEEEeecccccCcEEEeCCCCeeeccEEEE
Q 001616 192 GWYEGGSIFVAV-FLVIVVSAFSNFRQARQFDKLSKISNNIKVEVVREARRLQISIFDLVVGDIVFLKIGDQIPADGLFL 270 (1044)
Q Consensus 192 ~~~d~~~i~~~v-~lv~~v~a~~~~~~~~~~~~l~~~~~~~~v~ViR~G~~~~I~~~dLvvGDIV~l~~Gd~VPADgill 270 (1044)
.|||..++++.+ .+--.++.....+..+..++|.+. .+.+++|+|+|++++|+.++|+|||+|.+++||+|||||+++
T Consensus 284 ~~~~~~~~i~~~~~~g~~le~~~~~~~~~~~~~L~~l-~p~~a~~~~~~~~~~v~~~~l~~GD~v~v~~G~~iP~Dg~v~ 362 (834)
T PRK10671 284 LYYEASAMIIGLINLGHMLEARARQRSSKALEKLLDL-TPPTARVVTDEGEKSVPLADVQPGMLLRLTTGDRVPVDGEIT 362 (834)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCCEEEEEeCCcEEEEEHHHcCCCCEEEEcCCCEeeeeEEEE
Confidence 367765444333 233344444444445555555543 467899999999999999999999999999999999999999
Q ss_pred ecCceeeecCCCCCCCCceeecCCCCceeeecceEeeCceEEEEEEecccchhHHHHhhcCCCCCCCChhHHHHHHHHHH
Q 001616 271 DGHSLQVDESSMTGESDHVEVDSTNNPFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSSISSDSNERTPLQARLDKLTST 350 (1044)
Q Consensus 271 ~g~~l~VDES~LTGEs~pv~k~~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~gki~~~~~~~~~~~tplq~~l~~la~~ 350 (1044)
+|+. .||||+|||||.|+.|. .++.+|+||.+.+|.+++.|+++|.+|.+|++.+.+.+.+..++|+|+..++++.+
T Consensus 363 ~g~~-~vdeS~lTGEs~pv~k~--~gd~V~aGt~~~~G~~~~~v~~~g~~t~l~~i~~lv~~a~~~k~~~~~~~d~~a~~ 439 (834)
T PRK10671 363 QGEA-WLDEAMLTGEPIPQQKG--EGDSVHAGTVVQDGSVLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAV 439 (834)
T ss_pred EceE-EEeehhhcCCCCCEecC--CCCEEEecceecceeEEEEEEEEcCcChHHHHHHHHHHHhccCCcHHHHHHHHHHH
Confidence 9975 99999999999999998 57899999999999999999999999999999999988888899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccccCCCCCCcchhHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHH
Q 001616 351 IGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAAAVTIVVVAIPEGLPLAVTLTLAYSMK 430 (1044)
Q Consensus 351 i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~ilvvavP~gLplavtl~la~~~~ 430 (1044)
+.++.++++++++++|.. .+.. ..+...+..++++++++|||+|++++|+++..++.
T Consensus 440 ~v~~v~~~a~~~~~~~~~---~~~~--------------------~~~~~~~~~a~~vlv~acPcaL~la~p~a~~~~~~ 496 (834)
T PRK10671 440 FVPVVVVIALVSAAIWYF---FGPA--------------------PQIVYTLVIATTVLIIACPCALGLATPMSIISGVG 496 (834)
T ss_pred HHHHHHHHHHHHHHHHHH---hCCc--------------------hHHHHHHHHHHHHHHHhcccchhhhHHHHHHHHHH
Confidence 999999888888877632 2210 03445677899999999999999999999999999
Q ss_pred hhccccceeccchhhhcccCeeEEeeCcccccccCceEEEEEEeccccccccccccCChHHHHHHHHHHhhcCCcccccc
Q 001616 431 RMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKFWLGQESIVQETYCKIASSIRDLFHQGVGLNTTGSVSKL 510 (1044)
Q Consensus 431 ~m~k~~~lvr~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~n~~~~~~~~ 510 (1044)
+++++|+++|+.+++|+||++|++|||||||||+|+|+|.+++..+. .++ .+++....++++
T Consensus 497 ~~a~~gilvk~~~~le~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~---------~~~--~~~l~~a~~~e~------- 558 (834)
T PRK10671 497 RAAEFGVLVRDADALQRASTLDTLVFDKTGTLTEGKPQVVAVKTFNG---------VDE--AQALRLAAALEQ------- 558 (834)
T ss_pred HHHHCCeEEecHHHHHhhcCCCEEEEcCCCccccCceEEEEEEccCC---------CCH--HHHHHHHHHHhC-------
Confidence 99999999999999999999999999999999999999998765321 111 122333322221
Q ss_pred CCCCCcceecCChhHHHHHHHHHHHcCCChHHhhhcccEEEEecCCCCCceEEEEEEecCCCeEEEEecCcHHHHHHhcc
Q 001616 511 KPGSSVAEFSGSPTEKAVLSWAVLEMGMEMDKVKQKYSILHVETFNSEKKRSGVLIRRKADNTTHIHWKGAAEIILAMCS 590 (1044)
Q Consensus 511 ~~~~~~~~~~gsp~e~All~~a~~~~g~~~~~~~~~~~il~~~pF~s~rkrmsvvv~~~~~~~~~~~~KGA~e~Il~~c~ 590 (1044)
.+.||.++|+++++. ..... ...+|+.... .++... .+|. .+++|+++.+.+..
T Consensus 559 --------~s~hp~a~Ai~~~~~-~~~~~-----------~~~~~~~~~g-~Gv~~~-~~g~---~~~~G~~~~~~~~~- 612 (834)
T PRK10671 559 --------GSSHPLARAILDKAG-DMTLP-----------QVNGFRTLRG-LGVSGE-AEGH---ALLLGNQALLNEQQ- 612 (834)
T ss_pred --------CCCCHHHHHHHHHHh-hCCCC-----------CcccceEecc-eEEEEE-ECCE---EEEEeCHHHHHHcC-
Confidence 246999999999875 32211 1123332222 233222 2343 34569999874321
Q ss_pred cccccCCeeecCChhhHHHHHHHHHHHHhcccceeeeeeeecCchhhcccchHHHhhhhcccCeEEEEEecccCCCchhH
Q 001616 591 HYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAYNNDVKARQRLKEEGLTLLGIVGIKDPCRPGV 670 (1044)
Q Consensus 591 ~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~~A~k~l~~~~~~~~~~~~~~~~~~e~~l~llG~vgi~D~lR~~v 670 (1044)
++ ++.+.+.++.++++|.+++.+|+ |..++|+++++|++|||+
T Consensus 613 -----------~~---~~~~~~~~~~~~~~g~~~v~va~-----------------------~~~~~g~~~l~d~~r~~a 655 (834)
T PRK10671 613 -----------VD---TKALEAEITAQASQGATPVLLAV-----------------------DGKAAALLAIRDPLRSDS 655 (834)
T ss_pred -----------CC---hHHHHHHHHHHHhCCCeEEEEEE-----------------------CCEEEEEEEccCcchhhH
Confidence 11 23466677888899999999987 236899999999999999
Q ss_pred HHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCcccccccccceeecchhhhcCCHHHHHHHhccccEEeecChhhHHH
Q 001616 671 QKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPFDKLL 750 (1044)
Q Consensus 671 ~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~ar~sP~~K~~ 750 (1044)
+++|+.|++.|+++.|+|||+..+|.++|+++||.. ++++..|++|.+
T Consensus 656 ~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~~--------------------------------~~~~~~p~~K~~ 703 (834)
T PRK10671 656 VAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDE--------------------------------VIAGVLPDGKAE 703 (834)
T ss_pred HHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCE--------------------------------EEeCCCHHHHHH
Confidence 999999999999999999999999999999999964 789999999999
Q ss_pred HHHHHHhcCCEEEEEcCCcCCHHHHhhCCcceeeCCCchHHHhhccCEEEccCChhHHHHHHHHhHHHHHhHHHHHHHHH
Q 001616 751 MVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLRWGRCVYTNIQKFIQFQL 830 (1044)
Q Consensus 751 lV~~lq~~g~vVa~~GDG~NDapaLk~AdVGiamg~~gt~vAk~aaDivl~dd~f~~I~~~i~~GR~~~~ni~k~i~f~l 830 (1044)
+++.++++|+.|+|+|||.||+|||++||+||+|| +|++.++++||+++++|++..|..++++||.++.+|++++.|.+
T Consensus 704 ~i~~l~~~~~~v~~vGDg~nD~~al~~Agvgia~g-~g~~~a~~~ad~vl~~~~~~~i~~~i~l~r~~~~~i~~Nl~~a~ 782 (834)
T PRK10671 704 AIKRLQSQGRQVAMVGDGINDAPALAQADVGIAMG-GGSDVAIETAAITLMRHSLMGVADALAISRATLRNMKQNLLGAF 782 (834)
T ss_pred HHHHHhhcCCEEEEEeCCHHHHHHHHhCCeeEEec-CCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999 89999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHH
Q 001616 831 TVNVAALVINF 841 (1044)
Q Consensus 831 ~~nv~~~~~~~ 841 (1044)
.||++++.+++
T Consensus 783 ~yn~~~i~~a~ 793 (834)
T PRK10671 783 IYNSLGIPIAA 793 (834)
T ss_pred HHHHHHHHHHH
Confidence 99999988775
No 33
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.7e-59 Score=510.95 Aligned_cols=544 Identities=27% Similarity=0.394 Sum_probs=406.8
Q ss_pred HHHHHHHhHHHHHHHHHHHHHhhcccCCceEEEEeC-CeEEEEeecccccCcEEEeCCCCeeeccEEEEecCceeeecCC
Q 001616 203 VFLVIVVSAFSNFRQARQFDKLSKISNNIKVEVVRE-ARRLQISIFDLVVGDIVFLKIGDQIPADGLFLDGHSLQVDESS 281 (1044)
Q Consensus 203 v~lv~~v~a~~~~~~~~~~~~l~~~~~~~~v~ViR~-G~~~~I~~~dLvvGDIV~l~~Gd~VPADgill~g~~l~VDES~ 281 (1044)
+++..+.+++.+-+-+-|...|.+.+.....+++++ |..+.|++.+|..||+|.++.||+||+||.+++|.. +||||+
T Consensus 76 VlFANfaEa~AEGrgKAqAdsLr~~~~~~~A~~l~~~g~~~~v~st~Lk~gdiV~V~age~IP~DGeVIeG~a-sVdESA 154 (681)
T COG2216 76 VLFANFAEAVAEGRGKAQADSLRKTKTETIARLLRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIEGVA-SVDESA 154 (681)
T ss_pred HHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHhcCCCCeeeccccccccCCEEEEecCCCccCCCeEEeeee-ecchhh
Confidence 333445556666666667777766656667777876 899999999999999999999999999999999987 999999
Q ss_pred CCCCCCceeecCCC-CceeeecceEeeCceEEEEEEecccchhHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHHHHHHH
Q 001616 282 MTGESDHVEVDSTN-NPFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSSISSDSNERTPLQARLDKLTSTIGKVGLAVAF 360 (1044)
Q Consensus 282 LTGEs~pv~k~~~~-~~~l~sGt~v~~G~~~~~V~~vG~~T~~gki~~~~~~~~~~~tplq~~l~~la~~i~~~~l~~a~ 360 (1044)
+||||.||-|.+.. ..-+-.||.|++.+.+..+++.-.+|.+.||..++..++.++||-+-.++ +...++.+.+
T Consensus 155 ITGESaPViresGgD~ssVtGgT~v~SD~l~irita~pG~sFlDrMI~LVEgA~R~KTPNEIAL~-----iLL~~LTliF 229 (681)
T COG2216 155 ITGESAPVIRESGGDFSSVTGGTRVLSDWLKIRITANPGETFLDRMIALVEGAERQKTPNEIALT-----ILLSGLTLIF 229 (681)
T ss_pred ccCCCcceeeccCCCcccccCCcEEeeeeEEEEEEcCCCccHHHHHHHHhhchhccCChhHHHHH-----HHHHHHHHHH
Confidence 99999999998531 13488999999999999999999999999999999999999999665554 3334444333
Q ss_pred HHHHHHHHHHHhcCCCCCCCccccC-CCCCCcchhHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhhcccccee
Q 001616 361 LVLVVLLARYFTGNTKGENGIKEYN-GSNTDIDDVFNAVVSIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMTDQAMV 439 (1044)
Q Consensus 361 l~~iv~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ai~ilvvavP~gLplavtl~la~~~~~m~k~~~lv 439 (1044)
++.++.+..+ . .|. +... .+...++++|..+|-.+.-.++--=..+|.|+.+.|++.
T Consensus 230 L~~~~Tl~p~--a---------~y~~g~~~-----------~i~~LiALlV~LIPTTIGgLLsAIGIAGMdRv~~~NViA 287 (681)
T COG2216 230 LLAVATLYPF--A---------IYSGGGAA-----------SVTVLVALLVCLIPTTIGGLLSAIGIAGMDRVTQFNVIA 287 (681)
T ss_pred HHHHHhhhhH--H---------HHcCCCCc-----------CHHHHHHHHHHHhcccHHHHHHHhhhhhhhHhhhhceee
Confidence 3333322211 1 111 1111 234567788889998666555555556999999999999
Q ss_pred ccchhhhcccCeeEEeeCcccccccCceEEEEEEeccccccccccccCChHHHHHHHHHHhhcCCccccccCCCCCccee
Q 001616 440 RKLPACETMGSATVICTDKTGTLTLNQMKVTKFWLGQESIVQETYCKIASSIRDLFHQGVGLNTTGSVSKLKPGSSVAEF 519 (1044)
Q Consensus 440 r~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~n~~~~~~~~~~~~~~~~~ 519 (1044)
++..|+|..|.+|++..|||||+|.|.=.-.+++..+.... .+ +..+..+.+ ..
T Consensus 288 ~SGRAVEaaGDvdtliLDKTGTIT~GnR~A~~f~p~~gv~~-----------~~-la~aa~lsS---l~----------- 341 (681)
T COG2216 288 TSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFIPVPGVSE-----------EE-LADAAQLAS---LA----------- 341 (681)
T ss_pred cCcchhhhcCCccEEEecccCceeecchhhhheecCCCCCH-----------HH-HHHHHHHhh---hc-----------
Confidence 99999999999999999999999998777777665433211 11 222222222 11
Q ss_pred cCChhHHHHHHHHHHHcCCChHHhhhcccEEEEecCCCCCceEEEEEEecCCCeEEEEecCcHHHHHHhcccccccCCee
Q 001616 520 SGSPTEKAVLSWAVLEMGMEMDKVKQKYSILHVETFNSEKKRSGVLIRRKADNTTHIHWKGAAEIILAMCSHYYESNGVI 599 (1044)
Q Consensus 520 ~gsp~e~All~~a~~~~g~~~~~~~~~~~il~~~pF~s~rkrmsvvv~~~~~~~~~~~~KGA~e~Il~~c~~~~~~~g~~ 599 (1044)
-..|.-+.+++.|+ +.+.+.+...... .....||+.+.|.+|+-.. ++ +-.-|||.+.+.+.-+. .+|
T Consensus 342 DeTpEGrSIV~LA~-~~~~~~~~~~~~~-~~~fvpFtA~TRmSGvd~~--~~---~~irKGA~dai~~~v~~---~~g-- 409 (681)
T COG2216 342 DETPEGRSIVELAK-KLGIELREDDLQS-HAEFVPFTAQTRMSGVDLP--GG---REIRKGAVDAIRRYVRE---RGG-- 409 (681)
T ss_pred cCCCCcccHHHHHH-HhccCCCcccccc-cceeeecceecccccccCC--CC---ceeecccHHHHHHHHHh---cCC--
Confidence 12466678999998 7765543322111 2456899999888876553 33 34579999999877652 112
Q ss_pred ecCChhhHHHHHHHHHHHHhcccceeeeeeeecCchhhcccchHHHhhhhcccCeEEEEEecccCCCchhHHHHHHHHHh
Q 001616 600 KSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAYNNDVKARQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQS 679 (1044)
Q Consensus 600 ~~l~~~~~~~~~~~i~~~a~~glR~l~~A~k~l~~~~~~~~~~~~~~~~~~e~~l~llG~vgi~D~lR~~v~~aI~~l~~ 679 (1044)
...+.++...++-++.|=..++++. |-.++|++.++|-++||.+|-+.++|+
T Consensus 410 -----~~p~~l~~~~~~vs~~GGTPL~V~~-----------------------~~~~~GVI~LkDivK~Gi~ERf~elR~ 461 (681)
T COG2216 410 -----HIPEDLDAAVDEVSRLGGTPLVVVE-----------------------NGRILGVIYLKDIVKPGIKERFAELRK 461 (681)
T ss_pred -----CCCHHHHHHHHHHHhcCCCceEEEE-----------------------CCEEEEEEEehhhcchhHHHHHHHHHh
Confidence 2345678888899999988888875 347999999999999999999999999
Q ss_pred cCCEEEEEcCCCHHHHHHHHHHcCCcccccccccceeecchhhhcCCHHHHHHHhccccEEeecChhhHHHHHHHHHhcC
Q 001616 680 AGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPFDKLLMVQCLKKKG 759 (1044)
Q Consensus 680 aGI~v~mlTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~ar~sP~~K~~lV~~lq~~g 759 (1044)
.||+.+|+||||+.||.+||+|.|+.. ..|.++||||..+++.-|..|
T Consensus 462 MgIkTvM~TGDN~~TAa~IA~EAGVDd--------------------------------fiAeatPEdK~~~I~~eQ~~g 509 (681)
T COG2216 462 MGIKTVMITGDNPLTAAAIAAEAGVDD--------------------------------FIAEATPEDKLALIRQEQAEG 509 (681)
T ss_pred cCCeEEEEeCCCHHHHHHHHHHhCchh--------------------------------hhhcCChHHHHHHHHHHHhcC
Confidence 999999999999999999999999976 589999999999999999999
Q ss_pred CEEEEEcCCcCCHHHHhhCCcceeeCCCchHHHhhccCEEEccCChhHHHHHHHHhHHHHHhHHHHHHHHHH----HHHH
Q 001616 760 HVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLRWGRCVYTNIQKFIQFQLT----VNVA 835 (1044)
Q Consensus 760 ~vVa~~GDG~NDapaLk~AdVGiamg~~gt~vAk~aaDivl~dd~f~~I~~~i~~GR~~~~ni~k~i~f~l~----~nv~ 835 (1044)
+.|||||||+||||||.+||||+||. +||..|||++.+|=+|.|...+.+++..|+...-.=-..-.|++. +-++
T Consensus 510 rlVAMtGDGTNDAPALAqAdVg~AMN-sGTqAAkEAaNMVDLDS~PTKlievV~IGKqlLiTRGaLTTFSIANDvAKYFa 588 (681)
T COG2216 510 RLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEAANMVDLDSNPTKLIEVVEIGKQLLITRGALTTFSIANDVAKYFA 588 (681)
T ss_pred cEEEEcCCCCCcchhhhhcchhhhhc-cccHHHHHhhcccccCCCccceehHhhhhhhheeecccceeeehhhHHHHHHH
Confidence 99999999999999999999999999 999999999999999999999999999999876432222223332 1122
Q ss_pred HHHHHHHHHH--------hcCCCchhHHH-HHHHh-hhhhHHHHHHhc
Q 001616 836 ALVINFIAAV--------SAGEVPLTAVQ-LLWVN-LIMDTLGALALA 873 (1044)
Q Consensus 836 ~~~~~~~~~~--------~~~~~pl~~~q-lL~~n-li~d~l~alala 873 (1044)
.+...|.... ....+|-+++- -+.+| +|.-.|..+||-
T Consensus 589 IiPA~F~~~~P~l~~lNiM~L~sP~SAilSAlIfNAlIIv~LIPLAlk 636 (681)
T COG2216 589 IIPAMFAAAYPQLGALNIMHLHSPQSAILSALIFNALIIVALIPLALK 636 (681)
T ss_pred HHHHHHHhhcccccceeecccCCcHHHHHHHHHHHHHHHHHhHHHHhc
Confidence 2222332222 12356777664 23344 444555566664
No 34
>PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A ....
Probab=100.00 E-value=4.3e-34 Score=308.76 Aligned_cols=226 Identities=31% Similarity=0.562 Sum_probs=192.4
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHhhcccCCceEEEEeCCeEEEEeecccccCcEEEeCCCCeeeccEEEEecCceeee
Q 001616 199 IFVAVFLVIVVSAFSNFRQARQFDKLSKISNNIKVEVVREARRLQISIFDLVVGDIVFLKIGDQIPADGLFLDGHSLQVD 278 (1044)
Q Consensus 199 i~~~v~lv~~v~a~~~~~~~~~~~~l~~~~~~~~v~ViR~G~~~~I~~~dLvvGDIV~l~~Gd~VPADgill~g~~l~VD 278 (1044)
+++.+++..++..+.+++.+++.+++++...+..++|+|||++++++++||+|||+|.|++||++||||++++...+.||
T Consensus 2 i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~~g~~~vd 81 (230)
T PF00122_consen 2 ILFLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVIRDGRWQKIPSSELVPGDIIILKAGDIVPADGILLESGSAYVD 81 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEEETTEEEEEEGGGT-TTSEEEEETTEBESSEEEEEESSEEEEE
T ss_pred EEEEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEEeccccccchHhhccceeeeecccccccccCccceeccccccc
Confidence 45566677788888999999999999766555559999999999999999999999999999999999999993356999
Q ss_pred cCCCCCCCCceeec---CCCCceeeecceEeeCceEEEEEEecccchhHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHH
Q 001616 279 ESSMTGESDHVEVD---STNNPFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSSISSDSNERTPLQARLDKLTSTIGKVG 355 (1044)
Q Consensus 279 ES~LTGEs~pv~k~---~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~gki~~~~~~~~~~~tplq~~l~~la~~i~~~~ 355 (1044)
||.+|||+.|+.|. ...++++++||.+.+|++.++|++||.+|..|++.+...+.+.+++++++.+++++.++..+.
T Consensus 82 ~s~ltGes~pv~k~~~~~~~~~~i~~Gs~v~~g~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (230)
T PF00122_consen 82 ESALTGESEPVKKTPLPLNPGNIIFAGSIVVSGWGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLNKIAKILIIII 161 (230)
T ss_dssp CHHHHSBSSEEEESSSCCCTTTEE-TTEEEEEEEEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccchhhccccccccccccccceeeecccccccccccccccccchhhhhhhHHHHHHHHhcc
Confidence 99999999999998 235899999999999999999999999999999999998888888999999999999998888
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCccccCCCCCCcchhHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhhccc
Q 001616 356 LAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMTD 435 (1044)
Q Consensus 356 l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~ilvvavP~gLplavtl~la~~~~~m~k~ 435 (1044)
++++++++++++.. .. .. ++...+..++++++++||++||+++++++.+++++|.++
T Consensus 162 ~~~~~~~~~~~~~~---~~------~~--------------~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~~~~~ 218 (230)
T PF00122_consen 162 LAIAILVFIIWFFN---DS------GI--------------SFFKSFLFAISLLIVLIPCALPLALPLSLAIAARRLAKN 218 (230)
T ss_dssp HHHHHHHHHHCHTG---ST------TC--------------HCCHHHHHHHHHHHHHS-TTHHHHHHHHHHHHHHHHHHT
T ss_pred cccchhhhccceec---cc------cc--------------ccccccccccceeeeecccceeehHHHHHHHHHHHHHHC
Confidence 77777666443221 00 01 455678888999999999999999999999999999999
Q ss_pred cceeccchhhhc
Q 001616 436 QAMVRKLPACET 447 (1044)
Q Consensus 436 ~~lvr~~~a~E~ 447 (1044)
|+++|+++++|+
T Consensus 219 ~i~v~~~~a~E~ 230 (230)
T PF00122_consen 219 GIIVKNLSALEA 230 (230)
T ss_dssp TEEESSTTHHHH
T ss_pred CEEEeCcccccC
Confidence 999999999996
No 35
>PF00689 Cation_ATPase_C: Cation transporting ATPase, C-terminus; InterPro: IPR006068 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved C-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3A3Y_A 2ZXE_A 2XZB_A 3B9B_A 3N5K_A 3FPS_A 3B9R_A 1WPG_C 2AGV_A 2O9J_A ....
Probab=99.92 E-value=5e-25 Score=229.23 Aligned_cols=171 Identities=39% Similarity=0.640 Sum_probs=144.7
Q ss_pred CCchhHHHHHHHhhhhhHHHHHHhccCCCCcccccCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCc
Q 001616 849 EVPLTAVQLLWVNLIMDTLGALALATDRPTDELMQRPPVGRTEPLITNIMWRNLLSQALYQITILLILQFKGESIFNVSP 928 (1044)
Q Consensus 849 ~~pl~~~qlL~~nli~d~l~alala~e~p~~~lm~~~P~~~~~~li~~~~~~~i~~~~~~q~~v~~~l~~~~~~~~~~~~ 928 (1044)
|.||+++|+||+|+++|++|+++++.|||++++|+|||++++++++++.+|+.++.+++++.++.+..++.+...++.+.
T Consensus 1 P~Pl~~~qiL~inli~d~~~a~al~~e~~~~~im~r~Pr~~~~~l~~~~~~~~i~~~g~~~~~~~~~~f~~~~~~~~~~~ 80 (182)
T PF00689_consen 1 PLPLTPIQILWINLITDLLPALALGFEPPDPDIMKRPPRDPNEPLINKRLLRRILIQGLIMAAACFFAFFLGLYIFGWDE 80 (182)
T ss_dssp S-SS-HHHHHHHHHTTTHHHHHHGGGSS-STTGGGS---TTTS-SSSHHHHHHHCCHHHHHHHHHHHHHHHHHHSTCSSS
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHhcCcchhhhhhccccccchhhccHHhHhHHHHHHHHHHHHHHHHHHHHhhcccccc
Confidence 57999999999999999999999999999999999999999999999999999999999999988888777666666554
Q ss_pred c-------cccchhhhHHHHHHHHHHhhhccccccccc--ccccccHHHHHHHHHHHHHHHHHHHH--hhHhhccCCCCh
Q 001616 929 E-------VNDTLIFNTFVFCQVFNEFNARKLEKRNVF--KGIHKNKLFLGIIGITVVLQVVMVEF--LKKFADTERLNW 997 (1044)
Q Consensus 929 ~-------~~~t~~f~~~v~~q~fn~~n~r~~~~~~~f--~~~~~n~~f~~~i~~~~~~qv~~v~~--~~~~f~~~~l~~ 997 (1044)
. ..+|+.|++++++|++|.+++|+.+ .++| +++++|+++++++++++++|+++++. ++.+|++.++++
T Consensus 81 ~~~~~~~~~a~T~~F~~lv~~q~~~~~~~r~~~-~~~~~~~~~~~N~~l~~~~~~~~~l~~~i~~~P~~~~~f~~~~l~~ 159 (182)
T PF00689_consen 81 ETNNDNLAQAQTMAFTALVLSQLFNAFNCRSRR-RSVFRFRGIFSNKWLLIAILISIALQILIVYVPGLNRIFGTAPLPL 159 (182)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHHHHHTSSSS-STCTT-STGGGSHHHHHHHHHHHHHHHHHHHSTTHHHHST----TH
T ss_pred ccchhHHHHHHHHHHHHHHHHHHhhhccccccc-ccceecccccccchHHHHHHHHHHHHHHHhcchhhHhhhcccCCCH
Confidence 4 3899999999999999999999954 3444 58889999999999999999988765 899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhc
Q 001616 998 QQWLACIAMAAFTWPIGWAVKFI 1020 (1044)
Q Consensus 998 ~~w~~~i~~~~~~~~~~~~~k~i 1020 (1044)
.+|+++++++++.+++.++.|++
T Consensus 160 ~~w~~~l~~~~~~~~~~ei~K~i 182 (182)
T PF00689_consen 160 WQWLICLALALLPFIVDEIRKLI 182 (182)
T ss_dssp HHHHCHHHHHCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHC
Confidence 99999999999999999999975
No 36
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=99.90 E-value=1.3e-23 Score=223.95 Aligned_cols=97 Identities=45% Similarity=0.713 Sum_probs=91.3
Q ss_pred CeEEEEEecccCCCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCcccccccccceeecchhhhcCCHHHHHH
Q 001616 653 GLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQ 732 (1044)
Q Consensus 653 ~l~llG~vgi~D~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~ 732 (1044)
+++++|.+.+.|++||+++++|+.|+++|++++|+|||+..+|.++|+++||...
T Consensus 115 ~~~~~~~~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~~------------------------- 169 (215)
T PF00702_consen 115 NLIFLGLFGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFDS------------------------- 169 (215)
T ss_dssp SHEEEEEEEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCSE-------------------------
T ss_pred cCeEEEEEeecCcchhhhhhhhhhhhccCcceeeeeccccccccccccccccccc-------------------------
Confidence 5789999999999999999999999999999999999999999999999999532
Q ss_pred HhccccEEeec--ChhhH--HHHHHHHHhcCCEEEEEcCCcCCHHHHhhCC
Q 001616 733 KVDKIRVMARS--SPFDK--LLMVQCLKKKGHVVAVTGDGTNDAPALKEAD 779 (1044)
Q Consensus 733 ~~~~~~V~ar~--sP~~K--~~lV~~lq~~g~vVa~~GDG~NDapaLk~Ad 779 (1044)
.|++++ +|++| ..+++.||..++.|+|+|||.||++|+++||
T Consensus 170 -----~v~a~~~~kP~~k~~~~~i~~l~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 170 -----IVFARVIGKPEPKIFLRIIKELQVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp -----EEEESHETTTHHHHHHHHHHHHTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred -----cccccccccccchhHHHHHHHHhcCCCEEEEEccCHHHHHHHHhCc
Confidence 289999 99999 9999999977779999999999999999997
No 37
>KOG4383 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.88 E-value=8.5e-20 Score=205.85 Aligned_cols=303 Identities=14% Similarity=0.237 Sum_probs=219.7
Q ss_pred CcHHHHHHhcccccccCCeeecCChhhHHHHHHHHHHHHhcccceeeeeeeecCchh-------------hc--------
Q 001616 580 GAAEIILAMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEE-------------TA-------- 638 (1044)
Q Consensus 580 GA~e~Il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~~A~k~l~~~~-------------~~-------- 638 (1044)
|-.+.+.+.|++++| ..++.||+...|+++++....-...| .|++||||+....- ..
T Consensus 698 g~ad~~~eACTdfWd-Gadi~PlSg~dkkkV~DFY~RaclsG-~C~AfaYkP~~caLasqL~GKciEl~~~p~~SkI~T~ 775 (1354)
T KOG4383|consen 698 GFADFFEEACTDFWD-GADIIPLSGRDKKKVKDFYLRACLSG-HCLAFAYKPCFCALASQLAGKCIELPLNPEHSKIETA 775 (1354)
T ss_pred cHHHHHHHHhhhhcC-CceeeecCcchHHHHHHHHHHHhhcc-cchheecccHHHHHHHHhCCceEEeccCcccchhhhh
Confidence 778899999999997 45678999999999998888777677 59999999764320 00
Q ss_pred ----ccchHH--------------------HhhhhcccCeEEEEEecccCCCchhHHHHHHHHHhcCCEEEEEcCCCHHH
Q 001616 639 ----YNNDVK--------------------ARQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFT 694 (1044)
Q Consensus 639 ----~~~~~~--------------------~~~~~~e~~l~llG~vgi~D~lR~~v~~aI~~l~~aGI~v~mlTGD~~~t 694 (1044)
.....+ +.-...-.+.+|.|++....+.|++....|+.+-++.|+.+..|-++...
T Consensus 776 celp~sipikqnar~S~~e~Degige~l~~e~c~Qa~sGQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELk 855 (1354)
T KOG4383|consen 776 CELPHSIPIKQNARESFDEIDEGIGERLADEACDQAFSGQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELK 855 (1354)
T ss_pred ccCCCCCcchhhhhhhhhhhccccceeccHhHHHHHhccchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHH
Confidence 000000 00112235779999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCccccccc---------------------------------------ccceeecch-------hhhcCCH-
Q 001616 695 AKAIATECGILRLDQQV---------------------------------------EKGEVVEGV-------EFRNYTD- 727 (1044)
Q Consensus 695 A~aIA~~~GI~~~~~~~---------------------------------------~~~~vi~g~-------~~~~~~~- 727 (1044)
.+-.|.++||...++.- .....++-+ .|+.++.
T Consensus 856 SkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~~q~a~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~dsd 935 (1354)
T KOG4383|consen 856 SKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAHEQFAAQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDSD 935 (1354)
T ss_pred HHHHHHHhccccccceeEEeccCCCCCcccCCCCChhhhccCcchhHHHHHhhhcccccceeehhhcccCCccccccccc
Confidence 99999999999866531 000001000 1111110
Q ss_pred ------------------------HHHHHHhccccEEeecChhhHHHHHHHHHhcCCEEEEEcCCcCC--HHHHhhCCcc
Q 001616 728 ------------------------EERIQKVDKIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTND--APALKEADVG 781 (1044)
Q Consensus 728 ------------------------~~~~~~~~~~~V~ar~sP~~K~~lV~~lq~~g~vVa~~GDG~ND--apaLk~AdVG 781 (1044)
+++++...-+-.|..++|+.-.++++.+|++|+++++.|...|- .-.+-+|||+
T Consensus 936 i~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV~LFTDcnpeamcEMIeIMQE~GEVtcclGS~aN~rNSciflkadIS 1015 (1354)
T KOG4383|consen 936 IAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLVGLFTDCNPEAMCEMIEIMQENGEVTCCLGSCANARNSCIFLKADIS 1015 (1354)
T ss_pred hhhhcCCCchhhcCcchhhcCcccccccCcceeeeeccCCCHHHHHHHHHHHHHcCcEEEEeccccccccceEEEcccee
Confidence 01111111123799999999999999999999999999999884 4456789999
Q ss_pred eeeCCC------------chH------------------HHhhccCEEEccCChhHHHHHHHHhHHHHHhHHHHHHHHHH
Q 001616 782 LSMGIQ------------GTE------------------VAKESSDIVILDDDFTSVATVLRWGRCVYTNIQKFIQFQLT 831 (1044)
Q Consensus 782 iamg~~------------gt~------------------vAk~aaDivl~dd~f~~I~~~i~~GR~~~~ni~k~i~f~l~ 831 (1044)
||+..- ++. ...-+.|+-+.....-+|..+|..+|.....+|+.+.|.++
T Consensus 1016 ialD~l~~~~C~~e~fg~assismaqandglsplQiSgqLnaL~c~~~f~~ee~ikiirLIe~ARHa~~g~R~cfLFiLq 1095 (1354)
T KOG4383|consen 1016 IALDDLEEPACRLEDFGVASSISMAQANDGLSPLQISGQLNALACDFRFDHEELIKIIRLIECARHAMSGFRHCFLFILQ 1095 (1354)
T ss_pred EEeccCCCccceecccccchhhhhhhhcCCCCceeecccccccccccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHH
Confidence 997310 111 11122344443334456888899999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCchhHHHHHHHhhhhhHHHHHH-hccCCCCcccccC
Q 001616 832 VNVAALVINFIAAVSAGEVPLTAVQLLWVNLIMDTLGALA-LATDRPTDELMQR 884 (1044)
Q Consensus 832 ~nv~~~~~~~~~~~~~~~~pl~~~qlL~~nli~d~l~ala-la~e~p~~~lm~~ 884 (1044)
..+...++.|++.++..+..++..|++|...+-..+..+. |-+.+|...+|-+
T Consensus 1096 ~qL~l~Vi~flSc~~~LP~i~s~sdii~lScfc~PlL~i~tL~gk~~hkSii~m 1149 (1354)
T KOG4383|consen 1096 AQLLLSVIIFLSCFFFLPIIFSHSDIILLSCFCIPLLFIGTLFGKFEHKSIIIM 1149 (1354)
T ss_pred HHHHHHHHHHHHHHHhccchhccchHHHHHHHHHHHHHHHHHhcCCCccceEEe
Confidence 9999999999999999999999999999998876555554 4456665555544
No 38
>PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit
Probab=99.57 E-value=6.4e-15 Score=134.46 Aligned_cols=88 Identities=35% Similarity=0.599 Sum_probs=70.4
Q ss_pred hcCCccccccCCCCCcceecCChhHHHHHHHHHHHc--CCChHHhhhcccEEEEecCCCCCceEEEEEEecCCCeEEEEe
Q 001616 501 LNTTGSVSKLKPGSSVAEFSGSPTEKAVLSWAVLEM--GMEMDKVKQKYSILHVETFNSEKKRSGVLIRRKADNTTHIHW 578 (1044)
Q Consensus 501 ~n~~~~~~~~~~~~~~~~~~gsp~e~All~~a~~~~--g~~~~~~~~~~~il~~~pF~s~rkrmsvvv~~~~~~~~~~~~ 578 (1044)
+|+++..... ++....+..|+|+|.||+.|+. ++ +.+....+..+++++++||||+||||+|+++ +++.+.+|+
T Consensus 2 LCn~a~~~~~-~~~~~~~~~G~ptE~ALl~~~~-~~g~~~~~~~~~~~~~~~~~~pF~S~rK~msvv~~--~~~~~~~~~ 77 (91)
T PF13246_consen 2 LCNDAEIEYD-DESKTEEIIGDPTEKALLRFAK-KLGVGIDIKEIRSKYKIVAEIPFDSERKRMSVVVR--NDGKYILYV 77 (91)
T ss_pred CccccEeecC-CCCccccccCCcCHHHHHHHHH-HcCCCCcHHHHHhhcceeEEEccCcccceeEEEEe--CCCEEEEEc
Confidence 5555555432 1222234899999999999998 88 5567889999999999999999999999998 333577799
Q ss_pred cCcHHHHHHhcccc
Q 001616 579 KGAAEIILAMCSHY 592 (1044)
Q Consensus 579 KGA~e~Il~~c~~~ 592 (1044)
|||||.|+++|+++
T Consensus 78 KGA~e~il~~Ct~i 91 (91)
T PF13246_consen 78 KGAPEVILDRCTHI 91 (91)
T ss_pred CCChHHHHHhcCCC
Confidence 99999999999863
No 39
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=99.50 E-value=1.2e-13 Score=128.19 Aligned_cols=125 Identities=26% Similarity=0.338 Sum_probs=106.3
Q ss_pred EEEEEecccCCCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCcccccccccceeecchhhhcCCHHHHHHHh
Q 001616 655 TLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKV 734 (1044)
Q Consensus 655 ~llG~vgi~D~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~ 734 (1044)
...+.++---.+=++|+++|+.|++. ++|++.|||..-+....|+-.||...
T Consensus 20 ~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~--------------------------- 71 (152)
T COG4087 20 KVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVE--------------------------- 71 (152)
T ss_pred eEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCcee---------------------------
Confidence 34556666667779999999999999 99999999999999999999998754
Q ss_pred ccccEEeecChhhHHHHHHHHHhcCCEEEEEcCCcCCHHHHhhCCcceeeCCCc--hHHHhhccCEEEccCChhHHHHHH
Q 001616 735 DKIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQG--TEVAKESSDIVILDDDFTSVATVL 812 (1044)
Q Consensus 735 ~~~~V~ar~sP~~K~~lV~~lq~~g~vVa~~GDG~NDapaLk~AdVGiamg~~g--t~vAk~aaDivl~dd~f~~I~~~i 812 (1044)
+|||...|+.|..+++.|++.+++|.|+|||.||.+||++||+||..=.++ .+-+.++||+++. +...++.+.
T Consensus 72 ---rv~a~a~~e~K~~ii~eLkk~~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik--~i~e~ldl~ 146 (152)
T COG4087 72 ---RVFAGADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLK--EIAEILDLL 146 (152)
T ss_pred ---eeecccCHHHHHHHHHHhcCCCcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhh--hHHHHHHHh
Confidence 289999999999999999999999999999999999999999999753232 3446689999997 555555553
No 40
>PF00690 Cation_ATPase_N: Cation transporter/ATPase, N-terminus; InterPro: IPR004014 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases [, ]. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3KDP_C 3N2F_A 3B8E_A 3N23_A 2XZB_A 1MHS_B 3A3Y_A 2ZXE_A 3B8C_A 3B9B_A ....
Probab=99.22 E-value=2.1e-11 Score=105.46 Aligned_cols=67 Identities=33% Similarity=0.533 Sum_probs=63.1
Q ss_pred hCCHHHHHHHhCCCcCCCCCcCHHHHHHHHhhcCCCcCCCCCCCcHHHHHHHHhhhhHHHHHHHHHHHH
Q 001616 111 LGGVEGVANALGTNPEYGINGNDEDVSRRSQLFGANTYHKPPPKGLLHFVLEAFKDTTILILLVCAALS 179 (1044)
Q Consensus 111 ~ggv~~l~~~l~t~~~~GL~~~~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~illv~a~ls 179 (1044)
..+++++++.|+|+..+||++++ +.+|+++||+|++++++++++|+.++++|.++++++|+++|++|
T Consensus 3 ~~~~~~v~~~l~t~~~~GLs~~e--v~~r~~~~G~N~l~~~~~~s~~~~~~~~f~~~~~~lL~~aailS 69 (69)
T PF00690_consen 3 QLSVEEVLKRLNTSSSQGLSSEE--VEERRKKYGPNELPEPKKKSLWRIFLKQFKNPFIILLLIAAILS 69 (69)
T ss_dssp TSSHHHHHHHHTTBTSSBBTHHH--HHHHHHHHSSSSTTTTTSSSHHHHHHHHTTSHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHCcCCCCCCCHHH--HHHHHHhcccccccccccCcHHHHHHHHHHhHHHHHHHHHHHHC
Confidence 34789999999999999999866 99999999999999999999999999999999999999999987
No 41
>smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322.
Probab=99.10 E-value=1.2e-10 Score=99.12 Aligned_cols=62 Identities=32% Similarity=0.478 Sum_probs=57.4
Q ss_pred HhCCCcCCCCCcCHHHHHHHHhhcCCCcCCCCCCCcHHHHHHHHhhhhHHHHHHHHHHHHHhhc
Q 001616 120 ALGTNPEYGINGNDEDVSRRSQLFGANTYHKPPPKGLLHFVLEAFKDTTILILLVCAALSLGFG 183 (1044)
Q Consensus 120 ~l~t~~~~GL~~~~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~illv~a~lsl~~g 183 (1044)
.|+++.++||+.++ +++|+++||.|++++++++++|+.++++|.++++++|+++|++|+++|
T Consensus 2 ~l~~~~~~GLs~~~--v~~r~~~~G~N~l~~~~~~s~~~~~l~~~~~p~~~iL~~~a~is~~~~ 63 (64)
T smart00831 2 RLQTSLESGLSSEE--AARRLERYGPNELPPPKKRSPLLRFLRQFHNPLIYILLAAAVLSALLG 63 (64)
T ss_pred CCCCCcccCCCHHH--HHHHHHHhCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 47888888998866 999999999999999988999999999999999999999999998775
No 42
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=98.89 E-value=8.5e-09 Score=108.91 Aligned_cols=129 Identities=13% Similarity=0.073 Sum_probs=94.7
Q ss_pred CCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCcccccccccceeecc-hhhhcCCHHHHHHHhccccEEeec
Q 001616 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEG-VEFRNYTDEERIQKVDKIRVMARS 743 (1044)
Q Consensus 665 ~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~g-~~~~~~~~~~~~~~~~~~~V~ar~ 743 (1044)
+++||+++.|+.+++.| ++.++||-....+..+++++|+..--. ....+++ ..+ +.. .. .
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~a---n~l~~~~~g~~---tG~----------~~--~ 128 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLC---HKLEIDDSDRV---VGY----------QL--R 128 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhc---eeeEEecCCee---ECe----------ee--c
Confidence 57999999999999985 999999999999999999999963210 1111111 000 000 01 3
Q ss_pred ChhhHHHHHHHHHhcCCEEEEEcCCcCCHHHHhhCCcceeeCCCchHHHhhccC-EEEccCChhHHHHHHHHh
Q 001616 744 SPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSD-IVILDDDFTSVATVLRWG 815 (1044)
Q Consensus 744 sP~~K~~lV~~lq~~g~vVa~~GDG~NDapaLk~AdVGiamg~~gt~vAk~aaD-ivl~dd~f~~I~~~i~~G 815 (1044)
.|++|...++.+++.|..+.++|||.||.||++.||+|+++. +.+..+++|| +-.. .+.+.+..++.+.
T Consensus 129 ~~~~K~~~l~~l~~~~~~~v~vGDs~nDl~ml~~Ag~~ia~~--ak~~~~~~~~~~~~~-~~~~~~~~~~~~~ 198 (203)
T TIGR02137 129 QKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFH--APENVIREFPQFPAV-HTYEDLKREFLKA 198 (203)
T ss_pred CcchHHHHHHHHHhhCCCEEEEeCCHHHHHHHHhCCCCEEec--CCHHHHHhCCCCCcc-cCHHHHHHHHHHH
Confidence 577999999999988878899999999999999999999996 5555555554 4333 3567777766554
No 43
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=98.87 E-value=1.1e-08 Score=109.55 Aligned_cols=146 Identities=21% Similarity=0.241 Sum_probs=100.1
Q ss_pred CCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCcccccccccceeecchh-h-hc------C-----------
Q 001616 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVE-F-RN------Y----------- 725 (1044)
Q Consensus 665 ~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~g~~-~-~~------~----------- 725 (1044)
++.|++.++|++|++.|+++.++||.+...++.+++++++...-...+++.+.+..+ . .. +
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDIFLANMEEEWFLDEEKKKRFPR 97 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcEEEecccchhhHHHhhhhhhhh
Confidence 488999999999999999999999999999999999999864221112222221100 0 00 0
Q ss_pred -------------------CHHHHHHHhcc--ccE-----Eeec--ChhhHHHHHHHHHhc-C---CEEEEEcCCcCCHH
Q 001616 726 -------------------TDEERIQKVDK--IRV-----MARS--SPFDKLLMVQCLKKK-G---HVVAVTGDGTNDAP 773 (1044)
Q Consensus 726 -------------------~~~~~~~~~~~--~~V-----~ar~--sP~~K~~lV~~lq~~-g---~vVa~~GDG~NDap 773 (1044)
..+++.+.+.+ +.+ +... ...+|...++.+.+. | ..++++||+.||.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ 177 (215)
T TIGR01487 98 DRLSNEYPRASLVIMREGKDVDEVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDID 177 (215)
T ss_pred hhcccccceeEEEEecCCccHHHHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHH
Confidence 00111111111 111 1122 234788888887664 3 34899999999999
Q ss_pred HHhhCCcceeeCCCchHHHhhccCEEEccCChhHHHHH
Q 001616 774 ALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATV 811 (1044)
Q Consensus 774 aLk~AdVGiamg~~gt~vAk~aaDivl~dd~f~~I~~~ 811 (1044)
|++.|++|+||+ ++.+.+|+.||++..+.+-.++.++
T Consensus 178 ml~~ag~~vam~-na~~~~k~~A~~v~~~~~~~Gv~~~ 214 (215)
T TIGR01487 178 LFRVVGFKVAVA-NADDQLKEIADYVTSNPYGEGVVEV 214 (215)
T ss_pred HHHhCCCeEEcC-CccHHHHHhCCEEcCCCCCchhhhh
Confidence 999999999999 8999999999999976665555443
No 44
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=98.82 E-value=2e-08 Score=113.15 Aligned_cols=131 Identities=21% Similarity=0.318 Sum_probs=98.4
Q ss_pred CCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCcccccccccceeecchhhhcCCHHHHHHHhccccEEe-ec
Q 001616 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMA-RS 743 (1044)
Q Consensus 665 ~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~a-r~ 743 (1044)
++.||+.+.++.|+++|+++.++||.....+..+.+++|+..--. +.-.+.+|.--.. +.. -+
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~a--n~lei~dg~ltg~--------------v~g~iv 244 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVA--NELEIMDGKLTGN--------------VLGDIV 244 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEE--eEEEEECCEEEeE--------------ecCccC
Confidence 589999999999999999999999999888999999999853110 0001111110000 000 02
Q ss_pred ChhhHHHHHHHHHhc-C---CEEEEEcCCcCCHHHHhhCCcceeeCCCchHHHhhccCEEEccCChhHHHHHHH
Q 001616 744 SPFDKLLMVQCLKKK-G---HVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLR 813 (1044)
Q Consensus 744 sP~~K~~lV~~lq~~-g---~vVa~~GDG~NDapaLk~AdVGiamg~~gt~vAk~aaDivl~dd~f~~I~~~i~ 813 (1044)
..+.|...++.+.++ | +.+.++|||.||.+|++.|++|+|| ++.+..++.||.++...++..+..++.
T Consensus 245 ~~k~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~--nAkp~Vk~~Ad~~i~~~~l~~~l~~~~ 316 (322)
T PRK11133 245 DAQYKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY--HAKPKVNEQAQVTIRHADLMGVLCILS 316 (322)
T ss_pred CcccHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe--CCCHHHHhhCCEEecCcCHHHHHHHhc
Confidence 236788888887654 3 5688999999999999999999999 678889999999998888888877654
No 45
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=98.82 E-value=3.8e-08 Score=108.76 Aligned_cols=148 Identities=26% Similarity=0.279 Sum_probs=105.8
Q ss_pred CchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCccccccccccee-----------------------------
Q 001616 666 CRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEV----------------------------- 716 (1044)
Q Consensus 666 lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~~~~~~~~~~v----------------------------- 716 (1044)
+.+.++++|+++++.|+++.++||.....++.+.+++|+...-...+++.+
T Consensus 21 i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i~~~~~~~~~ 100 (264)
T COG0561 21 ISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGELLFQKPLSREDVEELLELLEDFQG 100 (264)
T ss_pred cCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcEEeeecCCHHHHHHHHHHHHhccC
Confidence 889999999999999999999999999999999999999742111000000
Q ss_pred ----ecc-h--------------------------hhhc----------CCH---HHHHHHh----c-cccEEeecCh--
Q 001616 717 ----VEG-V--------------------------EFRN----------YTD---EERIQKV----D-KIRVMARSSP-- 745 (1044)
Q Consensus 717 ----i~g-~--------------------------~~~~----------~~~---~~~~~~~----~-~~~V~ar~sP-- 745 (1044)
... . .... ... ++..+.+ . ....+.++.|
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~ 180 (264)
T COG0561 101 IALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGLTVSSSGPIS 180 (264)
T ss_pred ceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHHHHhhhccccceEEEEcCCce
Confidence 000 0 0000 001 1111111 1 1223444443
Q ss_pred -------hhHHHHHHHHHhc-CC---EEEEEcCCcCCHHHHhhCCcceeeCCCchHHHhhccCEEEccCChhHHHHHHHH
Q 001616 746 -------FDKLLMVQCLKKK-GH---VVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLRW 814 (1044)
Q Consensus 746 -------~~K~~lV~~lq~~-g~---vVa~~GDG~NDapaLk~AdVGiamg~~gt~vAk~aaDivl~dd~f~~I~~~i~~ 814 (1044)
-+|..-++.|.+. |- .|+++||+.||.+||+.|+.|+||| ++.+.+|+.||++....+-.+|..++++
T Consensus 181 lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~-Na~~~~k~~A~~vt~~n~~~Gv~~~l~~ 259 (264)
T COG0561 181 LDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMG-NADEELKELADYVTTSNDEDGVAEALEK 259 (264)
T ss_pred EEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeecc-CCCHHHHhhCCcccCCccchHHHHHHHH
Confidence 2798888888774 54 3999999999999999999999999 7899999999988888888888888765
No 46
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=98.81 E-value=3.6e-08 Score=109.25 Aligned_cols=66 Identities=29% Similarity=0.354 Sum_probs=55.7
Q ss_pred hHHHHHHHHHhc-C---CEEEEEcCCcCCHHHHhhCCcceeeCCCchHHHhhccCEEEccCChhHHHHHHH
Q 001616 747 DKLLMVQCLKKK-G---HVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLR 813 (1044)
Q Consensus 747 ~K~~lV~~lq~~-g---~vVa~~GDG~NDapaLk~AdVGiamg~~gt~vAk~aaDivl~dd~f~~I~~~i~ 813 (1044)
+|..-++.|.+. | +.|+++|||.||.+||+.|++|+||| ++.+.+|+.||+|..+++-.++..+++
T Consensus 196 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~-NA~~~vK~~A~~vt~~n~~dGva~~i~ 265 (270)
T PRK10513 196 NKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMG-NAIPSVKEVAQFVTKSNLEDGVAFAIE 265 (270)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEec-CccHHHHHhcCeeccCCCcchHHHHHH
Confidence 566666666553 3 45899999999999999999999999 899999999999998878788877764
No 47
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=98.81 E-value=3.5e-08 Score=106.54 Aligned_cols=148 Identities=20% Similarity=0.210 Sum_probs=102.4
Q ss_pred CCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCcccccccccceeec---chhhh------------------
Q 001616 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVE---GVEFR------------------ 723 (1044)
Q Consensus 665 ~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~---g~~~~------------------ 723 (1044)
++.|.+.++|+++++.|+++.++||.....+..+++++|+...-...+++.+.. ++.+.
T Consensus 20 ~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (230)
T PRK01158 20 RLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKRIFLGDIEECEKAYSELKKRF 99 (230)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCEEEEcchHHHHHHHHHHHHhc
Confidence 377899999999999999999999999999999999999853211112222221 11000
Q ss_pred -----------------------cCCHHHHHHHhcc----ccE-----EeecChh--hHHHHHHHHHhc-C---CEEEEE
Q 001616 724 -----------------------NYTDEERIQKVDK----IRV-----MARSSPF--DKLLMVQCLKKK-G---HVVAVT 765 (1044)
Q Consensus 724 -----------------------~~~~~~~~~~~~~----~~V-----~ar~sP~--~K~~lV~~lq~~-g---~vVa~~ 765 (1044)
....++..+.+.+ ..+ +....|. .|..-++.+.+. | ..++++
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~~~~~i~~ 179 (230)
T PRK01158 100 PEASTSLTKLDPDYRKTEVALRRTVPVEEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGIDPEEVAAI 179 (230)
T ss_pred cccceeeecCCcccccceeeecccccHHHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHhCCCHHHEEEE
Confidence 0001112222211 111 1233333 377777777654 2 458999
Q ss_pred cCCcCCHHHHhhCCcceeeCCCchHHHhhccCEEEccCChhHHHHHHH
Q 001616 766 GDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLR 813 (1044)
Q Consensus 766 GDG~NDapaLk~AdVGiamg~~gt~vAk~aaDivl~dd~f~~I~~~i~ 813 (1044)
||+.||.+|++.|++|+||| ++.+..|+.||+|..+++-.++..+++
T Consensus 180 GD~~NDi~m~~~ag~~vam~-Na~~~vk~~a~~v~~~n~~~Gv~~~l~ 226 (230)
T PRK01158 180 GDSENDLEMFEVAGFGVAVA-NADEELKEAADYVTEKSYGEGVAEAIE 226 (230)
T ss_pred CCchhhHHHHHhcCceEEec-CccHHHHHhcceEecCCCcChHHHHHH
Confidence 99999999999999999999 899999999999998777777777764
No 48
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=98.78 E-value=2.8e-08 Score=106.56 Aligned_cols=129 Identities=22% Similarity=0.305 Sum_probs=94.0
Q ss_pred CCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCcccccccccceeecchhhhcCCHHHHHHHhccccEEee-c
Q 001616 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMAR-S 743 (1044)
Q Consensus 665 ~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~ar-~ 743 (1044)
+++|++++.++.|++.|+++.++||.+...+..+.+.+|+..-.. .....++..+.. .+.++ .
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~---~~~~~~~~~~~~-------------~~~~~~~ 148 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFA---NRLEVEDGKLTG-------------LVEGPIV 148 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEe---eEEEEECCEEEE-------------EecCccc
Confidence 589999999999999999999999999999999999999864210 000000000000 00111 1
Q ss_pred ChhhHHHHHHHHHhc-C---CEEEEEcCCcCCHHHHhhCCcceeeCCCchHHHhhccCEEEccCChhHHHHH
Q 001616 744 SPFDKLLMVQCLKKK-G---HVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATV 811 (1044)
Q Consensus 744 sP~~K~~lV~~lq~~-g---~vVa~~GDG~NDapaLk~AdVGiamg~~gt~vAk~aaDivl~dd~f~~I~~~ 811 (1044)
.+..|..+++.+.++ | +.+.++||+.||.+|++.|+++++++ +.+..+++||++|.++++..+..+
T Consensus 149 ~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~--~~~~~~~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 149 DASYKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAFN--AKPKLQQKADICINKKDLTDILPL 218 (219)
T ss_pred CCcccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEeC--CCHHHHHhchhccCCCCHHHHHhh
Confidence 223466677665544 3 34778999999999999999999985 678888999999999999987654
No 49
>PRK10976 putative hydrolase; Provisional
Probab=98.77 E-value=8.1e-08 Score=106.26 Aligned_cols=66 Identities=32% Similarity=0.328 Sum_probs=53.8
Q ss_pred hHHHHHHHHHhc-C---CEEEEEcCCcCCHHHHhhCCcceeeCCCchHHHhhccC--EEEccCChhHHHHHHH
Q 001616 747 DKLLMVQCLKKK-G---HVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSD--IVILDDDFTSVATVLR 813 (1044)
Q Consensus 747 ~K~~lV~~lq~~-g---~vVa~~GDG~NDapaLk~AdVGiamg~~gt~vAk~aaD--ivl~dd~f~~I~~~i~ 813 (1044)
+|..-++.|.+. | +.|+++|||.||.+||+.|+.|+||| ++.+.+|+.|| .|+.+++=.++..+++
T Consensus 190 sKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~-NA~~~vK~~A~~~~v~~~n~edGVa~~l~ 261 (266)
T PRK10976 190 SKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMG-NAHQRLKDLLPELEVIGSNADDAVPHYLR 261 (266)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeec-CCcHHHHHhCCCCeecccCchHHHHHHHH
Confidence 466666666543 3 45899999999999999999999999 89999999988 6777777777777764
No 50
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=98.76 E-value=5e-08 Score=108.29 Aligned_cols=148 Identities=15% Similarity=0.162 Sum_probs=99.4
Q ss_pred CCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCcccccccccceeec--ch----------------------
Q 001616 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVE--GV---------------------- 720 (1044)
Q Consensus 665 ~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~--g~---------------------- 720 (1044)
.+-+..+++|+++++.|+++.+.||.+...+..+.+++|+...-...+++.+.+ |+
T Consensus 19 ~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~~~~~l~~~~i~~~~~~~i~~~~~~~ 98 (272)
T PRK15126 19 HLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSLEGELLHRQDLPADVAELVLHQQWDT 98 (272)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcCCCCEEEeecCCHHHHHHHHHHhhhc
Confidence 588999999999999999999999999999999999999853211001111100 00
Q ss_pred -------------------h----------------hhcC------------CHHH---HHHHh----c-cccE------
Q 001616 721 -------------------E----------------FRNY------------TDEE---RIQKV----D-KIRV------ 739 (1044)
Q Consensus 721 -------------------~----------------~~~~------------~~~~---~~~~~----~-~~~V------ 739 (1044)
. +..+ .+++ +.+.+ . ++.+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~ 178 (272)
T PRK15126 99 RASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICFCGDHDDLTRLQIQLNEALGERAHLCFSATD 178 (272)
T ss_pred CcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEEEEECCHHHHHHHHHHHHHHhcCCEEEEEcCCc
Confidence 0 0000 0011 11111 1 1111
Q ss_pred EeecChh--hHHHHHHHHHhc-C---CEEEEEcCCcCCHHHHhhCCcceeeCCCchHHHhhccCE--EEccCChhHHHHH
Q 001616 740 MARSSPF--DKLLMVQCLKKK-G---HVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDI--VILDDDFTSVATV 811 (1044)
Q Consensus 740 ~ar~sP~--~K~~lV~~lq~~-g---~vVa~~GDG~NDapaLk~AdVGiamg~~gt~vAk~aaDi--vl~dd~f~~I~~~ 811 (1044)
+...+|. .|..-++.|.+. | ..|+++|||.||.+||+.|+.|+||| ++.+.+|++||. ++.+++-.++..+
T Consensus 179 ~~eI~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~-Na~~~vK~~A~~~~v~~~n~edGva~~ 257 (272)
T PRK15126 179 CLEVLPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMG-NAMPQLRAELPHLPVIGHCRNQAVSHY 257 (272)
T ss_pred EEEeecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceecc-CChHHHHHhCCCCeecCCCcchHHHHH
Confidence 1122332 577777777654 3 45899999999999999999999999 899999999996 6667777777777
Q ss_pred HH
Q 001616 812 LR 813 (1044)
Q Consensus 812 i~ 813 (1044)
++
T Consensus 258 l~ 259 (272)
T PRK15126 258 LT 259 (272)
T ss_pred HH
Confidence 64
No 51
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=98.71 E-value=9.2e-08 Score=102.90 Aligned_cols=142 Identities=21% Similarity=0.241 Sum_probs=96.8
Q ss_pred CCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCcccccccccceeecchh----hh-cC--------------
Q 001616 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVE----FR-NY-------------- 725 (1044)
Q Consensus 665 ~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~g~~----~~-~~-------------- 725 (1044)
.+.+.+.++|++++++|+++.++||.+...+..+++++|+.......+++.+..... +. .+
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIAKTF 94 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEEecccCHHHHHHHHHhccc
Confidence 477889999999999999999999999999999999999543211111121111100 00 00
Q ss_pred ----------------------CHHHHHHHhcccc----E-----EeecCh--hhHHHHHHHHHhc-C---CEEEEEcCC
Q 001616 726 ----------------------TDEERIQKVDKIR----V-----MARSSP--FDKLLMVQCLKKK-G---HVVAVTGDG 768 (1044)
Q Consensus 726 ----------------------~~~~~~~~~~~~~----V-----~ar~sP--~~K~~lV~~lq~~-g---~vVa~~GDG 768 (1044)
..+...+...+.. + +....| .+|..-++.+.+. | +.|+++||+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~ 174 (225)
T TIGR01482 95 PFSRLKVQYPRRASLVKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDS 174 (225)
T ss_pred chhhhccccccccceEEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCC
Confidence 0111111111111 1 112223 3788888877664 3 468999999
Q ss_pred cCCHHHHhhCCcceeeCCCchHHHhhccCEEEccCChhH
Q 001616 769 TNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTS 807 (1044)
Q Consensus 769 ~NDapaLk~AdVGiamg~~gt~vAk~aaDivl~dd~f~~ 807 (1044)
.||.+|++.|++|+||+ ++.+..|+.||.|..+++-..
T Consensus 175 ~NDi~m~~~ag~~vam~-Na~~~~k~~A~~vt~~~~~~G 212 (225)
T TIGR01482 175 ENDIDLFEVPGFGVAVA-NAQPELKEWADYVTESPYGEG 212 (225)
T ss_pred HhhHHHHHhcCceEEcC-ChhHHHHHhcCeecCCCCCCc
Confidence 99999999999999999 899999999999987766666
No 52
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=98.70 E-value=9e-08 Score=104.05 Aligned_cols=148 Identities=21% Similarity=0.218 Sum_probs=101.7
Q ss_pred CCCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCccccccccccee---------------------------
Q 001616 664 DPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEV--------------------------- 716 (1044)
Q Consensus 664 D~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~~~~~~~~~~v--------------------------- 716 (1044)
..+-|++.++++.++++|+++.+.||.....++.+..++++...-...+++.+
T Consensus 14 ~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~~~i~~~~~~~i~~~~~~ 93 (254)
T PF08282_consen 14 GKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYEKPIDSDDVKKILKYLKE 93 (254)
T ss_dssp SSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEEESB-HHHHHHHHHHHHH
T ss_pred CeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhhhcccccceeeecccccchhhheeccchhheeehhhh
Confidence 34679999999999999999999999999999999999998632111111111
Q ss_pred --------------ecch---hhh-----------------------------cCCH-------HHHHHHhccccEEee-
Q 001616 717 --------------VEGV---EFR-----------------------------NYTD-------EERIQKVDKIRVMAR- 742 (1044)
Q Consensus 717 --------------i~g~---~~~-----------------------------~~~~-------~~~~~~~~~~~V~ar- 742 (1044)
.... ... .... +++.+..+....+.+
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 173 (254)
T PF08282_consen 94 HNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPNLIDVVRS 173 (254)
T ss_dssp TTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTTTEEEEEE
T ss_pred cccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCcceeEEEe
Confidence 0000 000 0000 112222222112222
Q ss_pred ------cCh--hhHHHHHHHHHhc----CCEEEEEcCCcCCHHHHhhCCcceeeCCCchHHHhhccCEEEccCChhHHHH
Q 001616 743 ------SSP--FDKLLMVQCLKKK----GHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVAT 810 (1044)
Q Consensus 743 ------~sP--~~K~~lV~~lq~~----g~vVa~~GDG~NDapaLk~AdVGiamg~~gt~vAk~aaDivl~dd~f~~I~~ 810 (1044)
.+| -+|..-++.|.+. .+.++++||+.||.+||+.|+.|+||+ ++++..|+.||++..+.+=.+|.+
T Consensus 174 ~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~-na~~~~k~~a~~i~~~~~~~gv~~ 252 (254)
T PF08282_consen 174 SPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMG-NATPELKKAADYITPSNNDDGVAK 252 (254)
T ss_dssp ETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEET-TS-HHHHHHSSEEESSGTCTHHHH
T ss_pred cccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEc-CCCHHHHHhCCEEecCCCCChHHH
Confidence 223 4798888888763 356889999999999999999999999 899999999999998766577776
Q ss_pred HH
Q 001616 811 VL 812 (1044)
Q Consensus 811 ~i 812 (1044)
+|
T Consensus 253 ~i 254 (254)
T PF08282_consen 253 AI 254 (254)
T ss_dssp HH
T ss_pred hC
Confidence 54
No 53
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=98.61 E-value=1.5e-07 Score=96.07 Aligned_cols=100 Identities=19% Similarity=0.218 Sum_probs=79.8
Q ss_pred HHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCcccccccccceeecchhhhcCCHHHHHHHhccccEEee--cChhhHH
Q 001616 672 KAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMAR--SSPFDKL 749 (1044)
Q Consensus 672 ~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~ar--~sP~~K~ 749 (1044)
.+|+.|+++|+++.++|+.+...+..+.+.+|+..- |.. -.|+--.
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~~--------------------------------f~~~kpkp~~~~ 88 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKRF--------------------------------HEGIKKKTEPYA 88 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcEE--------------------------------EecCCCCHHHHH
Confidence 689999999999999999999999999999999641 111 1233333
Q ss_pred HHHHHHHhcCCEEEEEcCCcCCHHHHhhCCcceeeCCCchHHHhhccCEEEccCC
Q 001616 750 LMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDD 804 (1044)
Q Consensus 750 ~lV~~lq~~g~vVa~~GDG~NDapaLk~AdVGiamg~~gt~vAk~aaDivl~dd~ 804 (1044)
.+++.+.-..+.++++||+.||.+|++.|++++||+ ++.+..|+.|++|..+.+
T Consensus 89 ~~~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~-nA~~~lk~~A~~I~~~~~ 142 (169)
T TIGR02726 89 QMLEEMNISDAEVCYVGDDLVDLSMMKRVGLAVAVG-DAVADVKEAAAYVTTARG 142 (169)
T ss_pred HHHHHcCcCHHHEEEECCCHHHHHHHHHCCCeEECc-CchHHHHHhCCEEcCCCC
Confidence 344444323356999999999999999999999999 889999999999886443
No 54
>PLN02887 hydrolase family protein
Probab=98.59 E-value=3.4e-07 Score=110.42 Aligned_cols=66 Identities=29% Similarity=0.426 Sum_probs=53.6
Q ss_pred hHHHHHHHHHhc-C---CEEEEEcCCcCCHHHHhhCCcceeeCCCchHHHhhccCEEEccCChhHHHHHHH
Q 001616 747 DKLLMVQCLKKK-G---HVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLR 813 (1044)
Q Consensus 747 ~K~~lV~~lq~~-g---~vVa~~GDG~NDapaLk~AdVGiamg~~gt~vAk~aaDivl~dd~f~~I~~~i~ 813 (1044)
+|..-++.|.+. | +.|+++|||.||.+||+.|+.||||| ++.+..|+.||+|..+++=.+|..+++
T Consensus 507 SKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAMg-NA~eeVK~~Ad~VT~sNdEDGVA~aLe 576 (580)
T PLN02887 507 SKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVALS-NGAEKTKAVADVIGVSNDEDGVADAIY 576 (580)
T ss_pred CHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEeC-CCCHHHHHhCCEEeCCCCcCHHHHHHH
Confidence 344444444433 2 34899999999999999999999999 899999999999998888888887775
No 55
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=98.58 E-value=4e-07 Score=100.91 Aligned_cols=66 Identities=29% Similarity=0.399 Sum_probs=54.2
Q ss_pred hHHHHHHHHHhc-C---CEEEEEcCCcCCHHHHhhCCcceeeCCCchHHHhhccCEEEccCChhHHHHHHH
Q 001616 747 DKLLMVQCLKKK-G---HVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLR 813 (1044)
Q Consensus 747 ~K~~lV~~lq~~-g---~vVa~~GDG~NDapaLk~AdVGiamg~~gt~vAk~aaDivl~dd~f~~I~~~i~ 813 (1044)
+|...++.+.++ | +.|+++||+.||.+|++.|++|+||| ++.+..|+.||+++.+++-.++..+++
T Consensus 199 ~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamg-na~~~lk~~Ad~v~~~n~~dGv~~~l~ 268 (272)
T PRK10530 199 SKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMG-NADDAVKARADLVIGDNTTPSIAEFIY 268 (272)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEec-CchHHHHHhCCEEEecCCCCcHHHHHH
Confidence 466656655443 3 35899999999999999999999999 788888999999998888888887774
No 56
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=98.54 E-value=4.3e-07 Score=91.78 Aligned_cols=96 Identities=19% Similarity=0.271 Sum_probs=77.5
Q ss_pred HHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCcccccccccceeecchhhhcCCHHHHHHHhccccEEeecChhhHHHHH
Q 001616 673 AVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPFDKLLMV 752 (1044)
Q Consensus 673 aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~ar~sP~~K~~lV 752 (1044)
+|+.|++.|+++.++||++...+..+.++.|+... +... ..|...+
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~--------------------------------~~~~--~~k~~~~ 81 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHL--------------------------------YQGQ--SNKLIAF 81 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEE--------------------------------Eecc--cchHHHH
Confidence 99999999999999999999999999999998641 1111 2344444
Q ss_pred HHHHh-c---CCEEEEEcCCcCCHHHHhhCCcceeeCCCchHHHhhccCEEEccC
Q 001616 753 QCLKK-K---GHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDD 803 (1044)
Q Consensus 753 ~~lq~-~---g~vVa~~GDG~NDapaLk~AdVGiamg~~gt~vAk~aaDivl~dd 803 (1044)
+.+.+ . .+.+.++||+.||.+|++.|+++++|. .+.+..+..||+++...
T Consensus 82 ~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~v~-~~~~~~~~~a~~i~~~~ 135 (154)
T TIGR01670 82 SDILEKLALAPENVAYIGDDLIDWPVMEKVGLSVAVA-DAHPLLIPRADYVTRIA 135 (154)
T ss_pred HHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEecC-CcCHHHHHhCCEEecCC
Confidence 44433 2 356999999999999999999999998 67788899999999744
No 57
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.50 E-value=5.8e-07 Score=95.49 Aligned_cols=116 Identities=24% Similarity=0.333 Sum_probs=86.2
Q ss_pred CCCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCccccccc---ccceeecchhhhcCCHHHHHHHhccccEE
Q 001616 664 DPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQV---EKGEVVEGVEFRNYTDEERIQKVDKIRVM 740 (1044)
Q Consensus 664 D~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~~~~~~---~~~~vi~g~~~~~~~~~~~~~~~~~~~V~ 740 (1044)
.+++|++.+.++.++++|.+|+++||-...-+..+|+.+|+...-... .++ +++|. |.
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG-~ltG~------------------v~ 136 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDG-KLTGR------------------VV 136 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCC-EEece------------------ee
Confidence 689999999999999999999999999999999999999997532110 011 22332 33
Q ss_pred e-ecChhhHHHHHHHHHh-cCC---EEEEEcCCcCCHHHHhhCCcceeeCCCchHHHhhccCEEE
Q 001616 741 A-RSSPFDKLLMVQCLKK-KGH---VVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVI 800 (1044)
Q Consensus 741 a-r~sP~~K~~lV~~lq~-~g~---vVa~~GDG~NDapaLk~AdVGiamg~~gt~vAk~aaDivl 800 (1044)
. .+..+.|...++.+.+ .|. .+.++|||.||.|||+.|+.+++.+ +....+..|+..+
T Consensus 137 g~~~~~~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n--~~~~l~~~a~~~~ 199 (212)
T COG0560 137 GPICDGEGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAVN--PKPKLRALADVRI 199 (212)
T ss_pred eeecCcchHHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEeC--cCHHHHHHHHHhc
Confidence 3 3444788888866655 454 3888999999999999999999996 3443444455443
No 58
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=98.48 E-value=7.8e-07 Score=97.85 Aligned_cols=64 Identities=33% Similarity=0.385 Sum_probs=53.8
Q ss_pred hHHHHHHHHHhc-C---CEEEEEcCCcCCHHHHhhCCcceeeCCCchHHHhhccCEEEccCChhHHHHH
Q 001616 747 DKLLMVQCLKKK-G---HVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATV 811 (1044)
Q Consensus 747 ~K~~lV~~lq~~-g---~vVa~~GDG~NDapaLk~AdVGiamg~~gt~vAk~aaDivl~dd~f~~I~~~ 811 (1044)
+|..-++.+.+. | +.++++||+.||.+|++.|+.|+||+ ++.+..|+.||+++.+.+-.+|..+
T Consensus 188 ~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~-na~~~~k~~a~~~~~~n~~dGV~~~ 255 (256)
T TIGR00099 188 SKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMG-NADEELKALADYVTDSNNEDGVALA 255 (256)
T ss_pred ChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEec-CchHHHHHhCCEEecCCCCcchhhh
Confidence 588888877664 2 46899999999999999999999999 7899999999999987666666543
No 59
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=98.47 E-value=2.1e-06 Score=94.39 Aligned_cols=147 Identities=16% Similarity=0.085 Sum_probs=94.5
Q ss_pred CchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCcccccccccceeecchh--------h--hcCCHHH------
Q 001616 666 CRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVE--------F--RNYTDEE------ 729 (1044)
Q Consensus 666 lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~g~~--------~--~~~~~~~------ 729 (1044)
.-+.+.++|+.++++|+++.++||.....+..+.+++|+...-...+++.+..... + ..++.+.
T Consensus 17 ~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~~~~~~~~~~~~i~~~~~~~il~ 96 (256)
T TIGR01486 17 DWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLEDPFIVENGGAIYGPRGWFTEPEYPVIALGIPYEKIRARLE 96 (256)
T ss_pred CchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCcEEEcCCeEEEeCCCcccCCCeEEEEcCCCHHHHHHHHH
Confidence 34568999999999999999999999999999999999853222222333322110 0 0011000
Q ss_pred -----------------------------------------------------HHHHhcc--ccE-----EeecCh--hh
Q 001616 730 -----------------------------------------------------RIQKVDK--IRV-----MARSSP--FD 747 (1044)
Q Consensus 730 -----------------------------------------------------~~~~~~~--~~V-----~ar~sP--~~ 747 (1044)
+.+.+.+ +.+ +-...| ..
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ei~~~~~~ 176 (256)
T TIGR01486 97 ELSEELGFKFRGLGDLTDAEIAELTGLSRELAALAQRREYSETILWSEERRERFTEALVELGLEVTHGNRFYHVLGAGSD 176 (256)
T ss_pred HHHHHhCCCccchhhCCHHHHHHHhCcCHHHHHHHhhCccCCceecChHHHHHHHHHHHHcCCEEEeCCceEEEecCCCC
Confidence 0001110 111 001111 25
Q ss_pred HHHHHHHHHhc------CCEEEEEcCCcCCHHHHhhCCcceeeCCCch---HHHhhc--c-CEEEccCChhHHHHHHH
Q 001616 748 KLLMVQCLKKK------GHVVAVTGDGTNDAPALKEADVGLSMGIQGT---EVAKES--S-DIVILDDDFTSVATVLR 813 (1044)
Q Consensus 748 K~~lV~~lq~~------g~vVa~~GDG~NDapaLk~AdVGiamg~~gt---~vAk~a--a-Divl~dd~f~~I~~~i~ 813 (1044)
|..-++.+.+. .+.|.++||+.||.+||+.|++|+||+ ++. +..|+. | ++|..+++-.++..+++
T Consensus 177 Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~-Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~ 253 (256)
T TIGR01486 177 KGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVP-GPNGPNVSLKPGDPGSFLLTPAPGPEGWREALE 253 (256)
T ss_pred HHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeC-CCCCCccccCccCCCcEEEcCCCCcHHHHHHHH
Confidence 66666666543 356999999999999999999999999 676 357776 4 58777777788877765
No 60
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=98.41 E-value=9.2e-07 Score=92.09 Aligned_cols=109 Identities=20% Similarity=0.267 Sum_probs=83.8
Q ss_pred HHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCcccccccccceeecchhhhcCCHHHHHHHhccccEEeecChhhHHHH
Q 001616 672 KAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPFDKLLM 751 (1044)
Q Consensus 672 ~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~ar~sP~~K~~l 751 (1044)
.+|+.|+++|+++.++||.....+..+++++|+.. +|. ..++|...
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~--------------------------------~f~--g~~~k~~~ 100 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITH--------------------------------LYQ--GQSNKLIA 100 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCce--------------------------------eec--CCCcHHHH
Confidence 69999999999999999999999999999999864 121 12345555
Q ss_pred HHHHH-hcC---CEEEEEcCCcCCHHHHhhCCcceeeCCCchHHHhhccCEEEccC----ChhHHHHHHHHh
Q 001616 752 VQCLK-KKG---HVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDD----DFTSVATVLRWG 815 (1044)
Q Consensus 752 V~~lq-~~g---~vVa~~GDG~NDapaLk~AdVGiamg~~gt~vAk~aaDivl~dd----~f~~I~~~i~~G 815 (1044)
++.+. +.| ..|+|+||+.||.+|++.|+++++++ ++.+..+..||+++... .+..+.+.+...
T Consensus 101 l~~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~v~-~~~~~~~~~a~~v~~~~~g~g~~~el~~~i~~~ 171 (183)
T PRK09484 101 FSDLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSVAVA-DAHPLLLPRADYVTRIAGGRGAVREVCDLLLLA 171 (183)
T ss_pred HHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeEecC-ChhHHHHHhCCEEecCCCCCCHHHHHHHHHHHh
Confidence 54443 333 46999999999999999999999998 77888899999998532 345555555433
No 61
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=98.39 E-value=1.8e-06 Score=91.41 Aligned_cols=126 Identities=19% Similarity=0.217 Sum_probs=90.1
Q ss_pred CCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCcccccccccceeecchhhhcCCHHHHHHHhccccEEe--e
Q 001616 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMA--R 742 (1044)
Q Consensus 665 ~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~a--r 742 (1044)
++.||+++.++.|+++ +++.++|+-....+..+.+++|+..--. .....++... +.. -
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~---~~~~~~~~~~----------------i~~~~~ 127 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFC---HSLEVDEDGM----------------ITGYDL 127 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhc---ceEEECCCCe----------------EECccc
Confidence 4589999999999999 9999999999999999999999853100 0011110000 011 1
Q ss_pred cChhhHHHHHHHHHhcCCEEEEEcCCcCCHHHHhhCCcceeeCCCchHHHhhccCEEEccCChhHHHHHH
Q 001616 743 SSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVL 812 (1044)
Q Consensus 743 ~sP~~K~~lV~~lq~~g~vVa~~GDG~NDapaLk~AdVGiamg~~gt~vAk~aaDivl~dd~f~~I~~~i 812 (1044)
..|..|...++.++..++.+.|+|||.||.+|.+.|++|+..+ .+.+.....++..+. +++..+...+
T Consensus 128 ~~p~~k~~~l~~~~~~~~~~v~iGDs~~D~~~~~aa~~~v~~~-~~~~~~~~~~~~~~~-~~~~el~~~l 195 (205)
T PRK13582 128 RQPDGKRQAVKALKSLGYRVIAAGDSYNDTTMLGEADAGILFR-PPANVIAEFPQFPAV-HTYDELLAAI 195 (205)
T ss_pred cccchHHHHHHHHHHhCCeEEEEeCCHHHHHHHHhCCCCEEEC-CCHHHHHhCCccccc-CCHHHHHHHH
Confidence 2467888889999888889999999999999999999999887 344444455665322 2566665544
No 62
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.38 E-value=4.3e-06 Score=92.83 Aligned_cols=149 Identities=11% Similarity=0.008 Sum_probs=93.1
Q ss_pred CchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCcc-cccccccceeecchh--------h-h-cCCHH------
Q 001616 666 CRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILR-LDQQVEKGEVVEGVE--------F-R-NYTDE------ 728 (1044)
Q Consensus 666 lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~-~~~~~~~~~vi~g~~--------~-~-~~~~~------ 728 (1044)
+-+.++++|++++++|+++++.||.....+..+++++|+.. .-...+++.+..... . . .++.+
T Consensus 25 i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~~~~~I~~NGa~I~~~~~~~~~~~~~~~~~~l~~~~~~~i~ 104 (271)
T PRK03669 25 DWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQGLPLIAENGAVIQLDEQWQDHPDFPRIISGISHGEIRQVL 104 (271)
T ss_pred CcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCCCCcEEEeCCCEEEecCcccCCCCceEeecCCCHHHHHHHH
Confidence 45778999999999999999999999999999999999842 111112222222100 0 0 01100
Q ss_pred ----------------------------------------------------H---HHHHhc--cccE-----EeecCh-
Q 001616 729 ----------------------------------------------------E---RIQKVD--KIRV-----MARSSP- 745 (1044)
Q Consensus 729 ----------------------------------------------------~---~~~~~~--~~~V-----~ar~sP- 745 (1044)
+ +.+.+. .+.+ +-...|
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iEi~~~ 184 (271)
T PRK03669 105 NTLREKEGFKFTTFDDVDDATIAEWTGLSRSQAALARLHEASVTLIWRDSDERMAQFTARLAELGLQFVQGARFWHVLDA 184 (271)
T ss_pred HHHHHhcCCceeecccCCHHHHHHHhCCCHHHHHHHhccccCceeEecCCHHHHHHHHHHHHHCCCEEEecCeeEEEecC
Confidence 0 000111 1111 111222
Q ss_pred -hhHHHHHHHHHh-------cCCEEEEEcCCcCCHHHHhhCCcceeeCCCchH---H--HhhccCEEEccCChhHHHHHH
Q 001616 746 -FDKLLMVQCLKK-------KGHVVAVTGDGTNDAPALKEADVGLSMGIQGTE---V--AKESSDIVILDDDFTSVATVL 812 (1044)
Q Consensus 746 -~~K~~lV~~lq~-------~g~vVa~~GDG~NDapaLk~AdVGiamg~~gt~---v--Ak~aaDivl~dd~f~~I~~~i 812 (1044)
-+|..-++.|.+ ....|+++|||.||.+||+.|++|+|||....+ . .+..+|++.....-.++.+++
T Consensus 185 g~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~l 264 (271)
T PRK03669 185 SAGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVKGLNREGVHLQDDDPARVYRTQREGPEGWREGL 264 (271)
T ss_pred CCCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEecCCCCCCcccccccCCceEeccCCCcHHHHHHH
Confidence 356666666544 235689999999999999999999999943322 1 344788888776777777776
Q ss_pred HH
Q 001616 813 RW 814 (1044)
Q Consensus 813 ~~ 814 (1044)
++
T Consensus 265 ~~ 266 (271)
T PRK03669 265 DH 266 (271)
T ss_pred HH
Confidence 53
No 63
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=98.33 E-value=2.1e-06 Score=90.46 Aligned_cols=117 Identities=20% Similarity=0.193 Sum_probs=82.6
Q ss_pred CCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCcccccccccceeecchhhhcCCHHHHHHHhccccEEeecC
Q 001616 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (1044)
Q Consensus 665 ~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~ar~s 744 (1044)
+++|++.+.++.|++.|+++.++|+-....+..+++.+|+..- ....+...+-.... +. .+....
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~-----~~~~~~~~~~g~~~--------p~--~~~~~~ 144 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYV-----YSNELVFDEKGFIQ--------PD--GIVRVT 144 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeE-----EEEEEEEcCCCeEe--------cc--eeeEEc
Confidence 5899999999999999999999999999999999999997531 01111110000000 01 112244
Q ss_pred hhhHHHHHHHHHhc-C---CEEEEEcCCcCCHHHHhhCCcceeeCCCchHHHhhccC
Q 001616 745 PFDKLLMVQCLKKK-G---HVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSD 797 (1044)
Q Consensus 745 P~~K~~lV~~lq~~-g---~vVa~~GDG~NDapaLk~AdVGiamg~~gt~vAk~aaD 797 (1044)
|..|...++.+.+. | +.+.++||+.||.+|++.|+++++++ .+....+.++|
T Consensus 145 ~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~-~~~~~~~~a~~ 200 (201)
T TIGR01491 145 FDNKGEAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLG-DEGHADYLAKD 200 (201)
T ss_pred cccHHHHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEEC-CCccchhhccc
Confidence 66787777766543 2 35899999999999999999999997 44445666665
No 64
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.27 E-value=1.2e-05 Score=89.45 Aligned_cols=149 Identities=16% Similarity=0.101 Sum_probs=95.3
Q ss_pred CCCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCcccccccccceeecchh----------------hh--cC
Q 001616 664 DPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVE----------------FR--NY 725 (1044)
Q Consensus 664 D~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~g~~----------------~~--~~ 725 (1044)
..+.+++.++|+.|++.|+++.++||.....+..+++++|+.......+++.+..... +. .+
T Consensus 20 ~~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (273)
T PRK00192 20 TYSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLEDPFIVENGAAIYIPKNYFPFQPDGERLKGDYWVIELGP 99 (273)
T ss_pred CcCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCEEEEcCcEEEecccccccCCccccccCCceEEEcCC
Confidence 3567889999999999999999999999999999999999864322222333322100 00 00
Q ss_pred CHHH-------------------------------------------------------------HHHHhcc--ccE---
Q 001616 726 TDEE-------------------------------------------------------------RIQKVDK--IRV--- 739 (1044)
Q Consensus 726 ~~~~-------------------------------------------------------------~~~~~~~--~~V--- 739 (1044)
+.+. +.+.+.+ +.+
T Consensus 100 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 179 (273)
T PRK00192 100 PYEELREILDEISDELGYPLKGFGDLSAEEVAELTGLSGESARLAKDREFSEPFLWNGSEAAKERFEEALKRLGLKVTRG 179 (273)
T ss_pred CHHHHHHHHHHHHHHhCCCeeehhhCCHHHHHHHhCcCHHHHHHHHhcccCCceeecCchHHHHHHHHHHHHcCCEEEEC
Confidence 0000 0000000 000
Q ss_pred --EeecC-hhhHHHHHHHHHhc----C-CEEEEEcCCcCCHHHHhhCCcceeeCCCchHHHh----hcc-CEEE--ccCC
Q 001616 740 --MARSS-PFDKLLMVQCLKKK----G-HVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAK----ESS-DIVI--LDDD 804 (1044)
Q Consensus 740 --~ar~s-P~~K~~lV~~lq~~----g-~vVa~~GDG~NDapaLk~AdVGiamg~~gt~vAk----~aa-Divl--~dd~ 804 (1044)
+-... +.+|..-++.+.+. . +.|+++||+.||.+|++.|++|+||+ ++.+..| .+| +.+. ...+
T Consensus 180 ~~~~ei~~~~~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~-NA~~~~k~~~~~~a~~~v~~~~~~~ 258 (273)
T PRK00192 180 GRFLHLLGGGDKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVP-GPDGPNPPLLPGIADGEFILASAPG 258 (273)
T ss_pred CeEEEEeCCCCHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeC-CCCCCCcccCccccCCceEEecCCC
Confidence 00111 11566666666543 4 78999999999999999999999999 8998888 666 5666 3444
Q ss_pred hhHHHHHHH
Q 001616 805 FTSVATVLR 813 (1044)
Q Consensus 805 f~~I~~~i~ 813 (1044)
=..+..+++
T Consensus 259 ~~Gv~~~l~ 267 (273)
T PRK00192 259 PEGWAEAIN 267 (273)
T ss_pred cHHHHHHHH
Confidence 556666553
No 65
>PRK08238 hypothetical protein; Validated
Probab=98.18 E-value=9.9e-05 Score=87.77 Aligned_cols=99 Identities=18% Similarity=0.204 Sum_probs=74.4
Q ss_pred CCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCcccccccccceeecchhhhcCCHHHHHHHhccccEEeecC
Q 001616 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (1044)
Q Consensus 665 ~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~ar~s 744 (1044)
|++|++.+.+++++++|+++.++|+-+...+..+++..|+.+ .++.+++ ..++.
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd--------~Vigsd~------------------~~~~k 125 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFD--------GVFASDG------------------TTNLK 125 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCC--------EEEeCCC------------------ccccC
Confidence 578999999999999999999999999999999999999832 1222211 11456
Q ss_pred hhhHHHHHHHHHhcCCEEEEEcCCcCCHHHHhhCCcceeeCCCchHH
Q 001616 745 PFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEV 791 (1044)
Q Consensus 745 P~~K~~lV~~lq~~g~vVa~~GDG~NDapaLk~AdVGiamg~~gt~v 791 (1044)
|+.|...++.....+. +.++||..||.|+++.|+-.++++ .+...
T Consensus 126 g~~K~~~l~~~l~~~~-~~yvGDS~~Dlp~~~~A~~av~Vn-~~~~l 170 (479)
T PRK08238 126 GAAKAAALVEAFGERG-FDYAGNSAADLPVWAAARRAIVVG-ASPGV 170 (479)
T ss_pred CchHHHHHHHHhCccC-eeEecCCHHHHHHHHhCCCeEEEC-CCHHH
Confidence 7777664442222222 567899999999999999999998 44433
No 66
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.18 E-value=3.3e-06 Score=84.79 Aligned_cols=109 Identities=19% Similarity=0.307 Sum_probs=78.1
Q ss_pred CCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCccccccccccee-ecchhhhcCCHHHHHHHhccccEEeec
Q 001616 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEV-VEGVEFRNYTDEERIQKVDKIRVMARS 743 (1044)
Q Consensus 665 ~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~~~~~~~~~~v-i~g~~~~~~~~~~~~~~~~~~~V~ar~ 743 (1044)
.+-||+++.+..|++.|.+|.++||--..-+..+|.++||...+.+-+.-.. -+|+-.. .. ...-.+
T Consensus 88 ~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~g-fd---------~~~pts-- 155 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGKYLG-FD---------TNEPTS-- 155 (227)
T ss_pred ccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCcccc-cc---------cCCccc--
Confidence 3579999999999999999999999999999999999999864432110000 0111000 00 000111
Q ss_pred ChhhHHHHHHHHHhc--CCEEEEEcCCcCCHHHHhhCCcceeeC
Q 001616 744 SPFDKLLMVQCLKKK--GHVVAVTGDGTNDAPALKEADVGLSMG 785 (1044)
Q Consensus 744 sP~~K~~lV~~lq~~--g~vVa~~GDG~NDapaLk~AdVGiamg 785 (1044)
...-|...++.+++. -+.++|+|||.||.+|+..||-=++.|
T Consensus 156 dsggKa~~i~~lrk~~~~~~~~mvGDGatDlea~~pa~afi~~~ 199 (227)
T KOG1615|consen 156 DSGGKAEVIALLRKNYNYKTIVMVGDGATDLEAMPPADAFIGFG 199 (227)
T ss_pred cCCccHHHHHHHHhCCChheeEEecCCccccccCCchhhhhccC
Confidence 224799999999885 457899999999999999988777665
No 67
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=98.17 E-value=1.2e-05 Score=86.06 Aligned_cols=136 Identities=15% Similarity=0.068 Sum_probs=89.4
Q ss_pred CCCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCcccccccccceeecchhhhcCCHHHHHHHhccccEE---
Q 001616 664 DPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVM--- 740 (1044)
Q Consensus 664 D~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~--- 740 (1044)
-+++||+++.++.|++.|+++.++||.....+..+.+..+.... . .......+|..+.... +.-..+
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~-i-~~n~~~~~~~~~~~~~--------p~~~~~~~~ 138 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDR-I-YCNEADFSNEYIHIDW--------PHPCDGTCQ 138 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCccc-E-EeceeEeeCCeeEEeC--------CCCCccccc
Confidence 46899999999999999999999999999999999988754321 0 0011233333322110 000000
Q ss_pred eecChhhHHHHHHHHHhcCCEEEEEcCCcCCHHHHhhCCcceeeCCCchHHHh--hccCEEEccCChhHHHHHHH
Q 001616 741 ARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAK--ESSDIVILDDDFTSVATVLR 813 (1044)
Q Consensus 741 ar~sP~~K~~lV~~lq~~g~vVa~~GDG~NDapaLk~AdVGiamg~~gt~vAk--~aaDivl~dd~f~~I~~~i~ 813 (1044)
..| ...|..+++.++...+.+.|+|||.||.+|++.||+++|=+ .-.+-.+ ..+.+.+ ++|..|...++
T Consensus 139 ~~c-g~~K~~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~~~ar~-~l~~~~~~~~~~~~~~--~~f~di~~~l~ 209 (214)
T TIGR03333 139 NQC-GCCKPSLIRKLSEPNDYHIVIGDSVTDVEAAKQSDLCFARD-YLLNECEELGLNHAPF--QDFYDVRKELE 209 (214)
T ss_pred cCC-CCCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHhCCeeEehH-HHHHHHHHcCCCccCc--CCHHHHHHHHH
Confidence 012 35799999999887788899999999999999999988754 1111111 1122222 46887776654
No 68
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=98.12 E-value=5.2e-06 Score=86.71 Aligned_cols=92 Identities=22% Similarity=0.250 Sum_probs=70.3
Q ss_pred hhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCcccccccccceeecchhhhcCCHHHHHHHhccccEEeecChh-
Q 001616 668 PGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPF- 746 (1044)
Q Consensus 668 ~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~ar~sP~- 746 (1044)
|++++.|+.++++|++++++||+....++.+|+.+|+.... ++....+.+- +....+|.+|.
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~-------v~~~~~~~~~----------~~~~~~~~~~~~ 154 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDN-------VIGNELFDNG----------GGIFTGRITGSN 154 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGG-------EEEEEEECTT----------CCEEEEEEEEEE
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceE-------EEEEeeeecc----------cceeeeeECCCC
Confidence 77789999999999999999999999999999999997531 1100001000 12245666665
Q ss_pred h--HHHHHHHH------HhcCCEEEEEcCCcCCHHHHh
Q 001616 747 D--KLLMVQCL------KKKGHVVAVTGDGTNDAPALK 776 (1044)
Q Consensus 747 ~--K~~lV~~l------q~~g~vVa~~GDG~NDapaLk 776 (1044)
+ |...++.+ +.....+.++|||.||.||||
T Consensus 155 ~~~K~~~l~~~~~~~~~~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 155 CGGKAEALKELYIRDEEDIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp ESHHHHHHHHHHHHHHHTHTCCEEEEEESSGGGHHHHH
T ss_pred CCcHHHHHHHHHHHhhcCCCCCeEEEEECCHHHHHHhC
Confidence 4 99999999 344789999999999999996
No 69
>PLN02954 phosphoserine phosphatase
Probab=98.08 E-value=2.9e-05 Score=83.45 Aligned_cols=128 Identities=24% Similarity=0.315 Sum_probs=84.6
Q ss_pred CCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCccccccccccee------ecchhhhcCCHHHHHHHhcccc
Q 001616 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEV------VEGVEFRNYTDEERIQKVDKIR 738 (1044)
Q Consensus 665 ~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~~~~~~~~~~v------i~g~~~~~~~~~~~~~~~~~~~ 738 (1044)
+++||+++.++.|++.|+++.++||.....+..+++.+|+...... ..... +.|.....
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~-~~~~~~~~~g~~~g~~~~~-------------- 148 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIF-ANQILFGDSGEYAGFDENE-------------- 148 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEE-EeEEEEcCCCcEECccCCC--------------
Confidence 3789999999999999999999999999999999999999631100 00001 11110000
Q ss_pred EEeecChhhHHHHHHHHHhc-C-CEEEEEcCCcCCHHHHhh--CCcceeeCCCc-hHHHhhccCEEEccCChhHHHHH
Q 001616 739 VMARSSPFDKLLMVQCLKKK-G-HVVAVTGDGTNDAPALKE--ADVGLSMGIQG-TEVAKESSDIVILDDDFTSVATV 811 (1044)
Q Consensus 739 V~ar~sP~~K~~lV~~lq~~-g-~vVa~~GDG~NDapaLk~--AdVGiamg~~g-t~vAk~aaDivl~dd~f~~I~~~ 811 (1044)
.. +.+..|...++.+.+. | +.+.++||+.||..|.+. ++++++.|... .+.....+|+++. ++..+..+
T Consensus 149 ~~--~~~~~K~~~i~~~~~~~~~~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~--~~~el~~~ 222 (224)
T PLN02954 149 PT--SRSGGKAEAVQHIKKKHGYKTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVT--DFQDLIEV 222 (224)
T ss_pred cc--cCCccHHHHHHHHHHHcCCCceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEEC--CHHHHHHh
Confidence 00 1123477777766654 3 568899999999999877 57777666322 2334456899886 56665543
No 70
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=98.04 E-value=4.7e-05 Score=82.65 Aligned_cols=66 Identities=18% Similarity=0.258 Sum_probs=53.4
Q ss_pred hHHHHHHHHHhc-C---CEEEEEcCCcCCHHHHhhCCcceeeCCCchHHHhhccC----EEEccCChhHHHHHHH
Q 001616 747 DKLLMVQCLKKK-G---HVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSD----IVILDDDFTSVATVLR 813 (1044)
Q Consensus 747 ~K~~lV~~lq~~-g---~vVa~~GDG~NDapaLk~AdVGiamg~~gt~vAk~aaD----ivl~dd~f~~I~~~i~ 813 (1044)
.|...++.|.++ | ..|+++||+.||.+||+.|+.|++|+ ++.+..|+.|| ++...++=.++.++|.
T Consensus 159 ~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~-na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~ 232 (236)
T TIGR02471 159 SKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVG-NHDPELEGLRHQQRIYFANNPHAFGILEGIN 232 (236)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEc-CCcHHHHHhhcCCcEEEcCCCChhHHHHHHH
Confidence 688888877664 3 24788999999999999999999999 78888999999 6666555666777764
No 71
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=97.96 E-value=2.6e-05 Score=81.07 Aligned_cols=113 Identities=17% Similarity=0.177 Sum_probs=77.8
Q ss_pred CCCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCcccccccccceeecchhhhcCCHHHHHHHh-ccccEEee
Q 001616 664 DPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKV-DKIRVMAR 742 (1044)
Q Consensus 664 D~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~-~~~~V~ar 742 (1044)
-+++|++.+.++.|++.|+++.++|+.+......+.+..|+...- ..++.++...+ . +...... .++.++..
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f-----~~i~~~~~~~~-~-~g~~~~~~~~~~~~~~ 143 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVF-----IEIYSNPASFD-N-DGRHIVWPHHCHGCCS 143 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhhe-----eEEeccCceEC-C-CCcEEEecCCCCccCc
Confidence 478999999999999999999999999999999999999985421 11222111100 0 0000000 01111111
Q ss_pred -cChhhHHHHHHHHHhc-CCEEEEEcCCcCCHHHHhhCCccee
Q 001616 743 -SSPFDKLLMVQCLKKK-GHVVAVTGDGTNDAPALKEADVGLS 783 (1044)
Q Consensus 743 -~sP~~K~~lV~~lq~~-g~vVa~~GDG~NDapaLk~AdVGia 783 (1044)
.....|..+++.+++. .+.+.++|||.||..|.++||+-+|
T Consensus 144 ~~~g~~K~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 144 CPCGCCKGKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred CCCCCCHHHHHHHHHhhcCceEEEECCCcchhchHhcCCcccc
Confidence 1123599999999887 7889999999999999999998775
No 72
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=97.92 E-value=1.9e-05 Score=81.41 Aligned_cols=98 Identities=20% Similarity=0.281 Sum_probs=70.3
Q ss_pred CCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCcccccc---cccceeecchhhhcCCHHHHHHHhccccEEe
Q 001616 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQ---VEKGEVVEGVEFRNYTDEERIQKVDKIRVMA 741 (1044)
Q Consensus 665 ~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~~~~~---~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~a 741 (1044)
+++|++++.++.+++.|+++.++||.....+..+++..|+..--.. ....-.++|+... + .
T Consensus 73 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~~~~~~~~~~~g~~~g~~~~------------~----~ 136 (177)
T TIGR01488 73 ALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDVFANRLEFDDNGLLTGPIEG------------Q----V 136 (177)
T ss_pred CcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchheeeeEEECCCCEEeCccCC------------c----c
Confidence 3689999999999999999999999999999999999998631000 0000011121000 0 1
Q ss_pred ecChhhHHHHHHHHHhc----CCEEEEEcCCcCCHHHHhhC
Q 001616 742 RSSPFDKLLMVQCLKKK----GHVVAVTGDGTNDAPALKEA 778 (1044)
Q Consensus 742 r~sP~~K~~lV~~lq~~----g~vVa~~GDG~NDapaLk~A 778 (1044)
.+.+..|...++.+++. .+.+.++|||.||.+|++.|
T Consensus 137 ~~~~~~K~~~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 137 NPEGECKGKVLKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred cCCcchHHHHHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 24567899999887654 34589999999999999876
No 73
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=97.91 E-value=3.1e-05 Score=75.54 Aligned_cols=118 Identities=19% Similarity=0.274 Sum_probs=93.2
Q ss_pred HHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCcccccccccceeecchhhhcCCHHHHHHHhccccEEeecChhhHHHH
Q 001616 672 KAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPFDKLLM 751 (1044)
Q Consensus 672 ~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~ar~sP~~K~~l 751 (1044)
-.|+.+.++||+|-++||.+...++.=|+++||.. ++-- -.+|...
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~--------------------------------~~qG--~~dK~~a 87 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKH--------------------------------LYQG--ISDKLAA 87 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCce--------------------------------eeec--hHhHHHH
Confidence 57999999999999999999999999999999964 1211 2578877
Q ss_pred HHHHHhc----CCEEEEEcCCcCCHHHHhhCCcceeeCCCchHHHhhccCEEEccC----ChhHHHHHHHHhHHHHHhHH
Q 001616 752 VQCLKKK----GHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDD----DFTSVATVLRWGRCVYTNIQ 823 (1044)
Q Consensus 752 V~~lq~~----g~vVa~~GDG~NDapaLk~AdVGiamg~~gt~vAk~aaDivl~dd----~f~~I~~~i~~GR~~~~ni~ 823 (1044)
.+.|.++ -+.|+++||-.||-|+|+...+++|.. .+..-.++.||+|+... -+..+.++|..++.-++-..
T Consensus 88 ~~~L~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~~-dAh~~v~~~a~~Vt~~~GG~GAvREv~dlil~aq~~~d~~~ 166 (170)
T COG1778 88 FEELLKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAVA-DAHPLLKQRADYVTSKKGGEGAVREVCDLILQAQGKLDEAL 166 (170)
T ss_pred HHHHHHHhCCCHHHhhhhcCccccHHHHHHcCCccccc-ccCHHHHHhhHhhhhccCcchHHHHHHHHHHHccCcHHHHH
Confidence 7777654 356899999999999999999999998 77778888999998643 34556666666666655444
Q ss_pred H
Q 001616 824 K 824 (1044)
Q Consensus 824 k 824 (1044)
+
T Consensus 167 ~ 167 (170)
T COG1778 167 G 167 (170)
T ss_pred h
Confidence 3
No 74
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=97.88 E-value=5.1e-05 Score=80.11 Aligned_cols=106 Identities=15% Similarity=0.102 Sum_probs=77.1
Q ss_pred cCCCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCcccccc-cc--cceeecchhhhcCCHHHHHHHhccccE
Q 001616 663 KDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQ-VE--KGEVVEGVEFRNYTDEERIQKVDKIRV 739 (1044)
Q Consensus 663 ~D~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~~~~~-~~--~~~vi~g~~~~~~~~~~~~~~~~~~~V 739 (1044)
..+++|++.+.++.+++.|+++.++||-....+..+++.+|+..--.. .. ..-..+|+..
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~~l~~~~~g~~~g~~~----------------- 147 (202)
T TIGR01490 85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGTRLEESEDGIYTGNID----------------- 147 (202)
T ss_pred HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEecceEEcCCCEEeCCcc-----------------
Confidence 456899999999999999999999999999999999999998531000 00 0001112110
Q ss_pred EeecChhhHHHHHHHHHh-cCC---EEEEEcCCcCCHHHHhhCCcceeeC
Q 001616 740 MARSSPFDKLLMVQCLKK-KGH---VVAVTGDGTNDAPALKEADVGLSMG 785 (1044)
Q Consensus 740 ~ar~sP~~K~~lV~~lq~-~g~---vVa~~GDG~NDapaLk~AdVGiamg 785 (1044)
--.+.++.|...++.+.+ .|. .+.++||+.+|.||++.|+.++++.
T Consensus 148 ~~~~~g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~ 197 (202)
T TIGR01490 148 GNNCKGEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVN 197 (202)
T ss_pred CCCCCChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeC
Confidence 012346788887776654 342 5788999999999999999999886
No 75
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=97.87 E-value=8.3e-05 Score=79.89 Aligned_cols=126 Identities=23% Similarity=0.341 Sum_probs=87.6
Q ss_pred CCCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCcccccccccceeecchhhhcCCHHHHHHHhccccEEeec
Q 001616 664 DPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARS 743 (1044)
Q Consensus 664 D~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~ar~ 743 (1044)
-++.||+.++++.|++.|+++.++||.....+..+.+..|+... ...++.+... .+.
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~-----f~~~~~~~~~------------------~~~ 148 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADY-----FSVVIGGDSL------------------PNK 148 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccC-----ccEEEcCCCC------------------CCC
Confidence 45789999999999999999999999999999999999998542 1122222211 112
Q ss_pred Ch--hhHHHHHHHHHhcCCEEEEEcCCcCCHHHHhhCCc-ceee--CCC-chHHHhhccCEEEccCChhHHHHHHHH
Q 001616 744 SP--FDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADV-GLSM--GIQ-GTEVAKESSDIVILDDDFTSVATVLRW 814 (1044)
Q Consensus 744 sP--~~K~~lV~~lq~~g~vVa~~GDG~NDapaLk~AdV-Giam--g~~-gt~vAk~aaDivl~dd~f~~I~~~i~~ 814 (1044)
.| +--..+++.++...+.+.++||+.||..|.+.|++ ++.+ |.. ..+.....+|+++. ++..+..++.+
T Consensus 149 kp~~~~~~~~~~~~~~~~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i~--~~~~l~~~l~~ 223 (226)
T PRK13222 149 KPDPAPLLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVID--HFAELLPLLGL 223 (226)
T ss_pred CcChHHHHHHHHHcCCChhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEEC--CHHHHHHHHHH
Confidence 22 22233344444345668899999999999999998 4444 321 23455567888884 78888877654
No 76
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=97.86 E-value=6.5e-05 Score=80.60 Aligned_cols=134 Identities=17% Similarity=0.122 Sum_probs=85.2
Q ss_pred CCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCcccccccccceeecchhhhcCCHHHHHHHhccccEE---e
Q 001616 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVM---A 741 (1044)
Q Consensus 665 ~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~---a 741 (1044)
+++||+.+.++.|++.|+++.++||-....+..+.+.. +.... ........+|..+.... +.-... .
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~-i~~n~~~~~~~~~~~~k--------p~p~~~~~~~ 143 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQ-IYCNGSDFSGEYITITW--------PHPCDEHCQN 143 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCc-EEEeEEEecCCeeEEec--------cCCccccccc
Confidence 68999999999999999999999999999999999988 54310 00011122333221100 000000 0
Q ss_pred ecChhhHHHHHHHHHhcCCEEEEEcCCcCCHHHHhhCCcceeeCCCchHHHhh--ccCEEEccCChhHHHHHH
Q 001616 742 RSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKE--SSDIVILDDDFTSVATVL 812 (1044)
Q Consensus 742 r~sP~~K~~lV~~lq~~g~vVa~~GDG~NDapaLk~AdVGiamg~~gt~vAk~--aaDivl~dd~f~~I~~~i 812 (1044)
++ ...|...++.++.....+.++|||.||.+|.+.||+.++-+ .-.+.+++ .+.+.+ ++|..+...+
T Consensus 144 ~~-~~~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a~~-~l~~~~~~~~~~~~~~--~~f~ei~~~l 212 (219)
T PRK09552 144 HC-GCCKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFARD-FLITKCEELGIPYTPF--ETFHDVQTEL 212 (219)
T ss_pred cC-CCchHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCcceeHH-HHHHHHHHcCCCcccc--CCHHHHHHHH
Confidence 01 13488888888777777899999999999999999977632 11122222 233333 3677766655
No 77
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=97.82 E-value=0.00018 Score=78.82 Aligned_cols=150 Identities=15% Similarity=0.120 Sum_probs=95.7
Q ss_pred cCCCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCcccc--cccccceeecchhh------------------
Q 001616 663 KDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLD--QQVEKGEVVEGVEF------------------ 722 (1044)
Q Consensus 663 ~D~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~~~--~~~~~~~vi~g~~~------------------ 722 (1044)
..+..|...++++++++.|+.++.+||......+.+.+++++..+. ...+++.+..+...
T Consensus 19 ~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~~ 98 (249)
T TIGR01485 19 DNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRDI 98 (249)
T ss_pred ChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCcCCHHHHHHHhcccCHHH
Confidence 3457799999999999999999999999999999999999986542 11122222211000
Q ss_pred --------hcC-----------------CHHH-------HHHHhc----cccE-Ee-----ecCh--hhHHHHHHHHHhc
Q 001616 723 --------RNY-----------------TDEE-------RIQKVD----KIRV-MA-----RSSP--FDKLLMVQCLKKK 758 (1044)
Q Consensus 723 --------~~~-----------------~~~~-------~~~~~~----~~~V-~a-----r~sP--~~K~~lV~~lq~~ 758 (1044)
..+ ..+. +.+.+. ++.+ .+ ...| ..|...++.+.+.
T Consensus 99 ~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~ 178 (249)
T TIGR01485 99 VVAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQK 178 (249)
T ss_pred HHHHHhcCcccccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHHH
Confidence 000 0011 111111 1111 11 2233 4788888888764
Q ss_pred ----CCEEEEEcCCcCCHHHHhh-CCcceeeCCCchHHHhhccC-------EEEccCChhHHHHHHH
Q 001616 759 ----GHVVAVTGDGTNDAPALKE-ADVGLSMGIQGTEVAKESSD-------IVILDDDFTSVATVLR 813 (1044)
Q Consensus 759 ----g~vVa~~GDG~NDapaLk~-AdVGiamg~~gt~vAk~aaD-------ivl~dd~f~~I~~~i~ 813 (1044)
...|+++||+.||.+|++. ++.|++|+ ++.+..|+.++ ++.....-+.+.++++
T Consensus 179 ~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~-na~~~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~ 244 (249)
T TIGR01485 179 LAMEPSQTLVCGDSGNDIELFEIGSVRGVIVS-NAQEELLQWYDENAKDKIYHASERCAGGIIEAIA 244 (249)
T ss_pred cCCCccCEEEEECChhHHHHHHccCCcEEEEC-CCHHHHHHHHHhcccCcEEEecCCCcHHHHHHHH
Confidence 3568999999999999998 77999999 78777775432 4333334455655553
No 78
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=97.77 E-value=0.00016 Score=77.94 Aligned_cols=44 Identities=14% Similarity=0.126 Sum_probs=39.1
Q ss_pred cCCCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCcc
Q 001616 663 KDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILR 706 (1044)
Q Consensus 663 ~D~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~ 706 (1044)
.+..-+++.++|++++++|++++++||.....+..+.+++|+..
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~~ 56 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVEP 56 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCC
Confidence 34556779999999999999999999999999999999999853
No 79
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=97.73 E-value=7e-05 Score=72.67 Aligned_cols=117 Identities=18% Similarity=0.186 Sum_probs=76.8
Q ss_pred cccCCCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCcccccccccceeecchhhhcCCHHHHHHHhccccEE
Q 001616 661 GIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVM 740 (1044)
Q Consensus 661 gi~D~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~ 740 (1044)
.-..++++++++.++.|++.|++++++||.....+....+.+|+.... ..++......................+
T Consensus 20 ~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~-----~~i~~~~~~~~~~~~~~~~~~~~~~~~ 94 (139)
T cd01427 20 IEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYF-----DPVITSNGAAIYYPKEGLFLGGGPFDI 94 (139)
T ss_pred cccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhh-----hheeccchhhhhccccccccccccccc
Confidence 455689999999999999999999999999999999999999984321 111111100000000000001111234
Q ss_pred eecChhhHHHHHHHHHhcCCEEEEEcCCcCCHHHHhh-CCcce
Q 001616 741 ARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKE-ADVGL 782 (1044)
Q Consensus 741 ar~sP~~K~~lV~~lq~~g~vVa~~GDG~NDapaLk~-AdVGi 782 (1044)
.+-.|+.+..+.+.+....+.+.++||+.||..|++. ..-++
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i 137 (139)
T cd01427 95 GKPNPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGV 137 (139)
T ss_pred CCCCHHHHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCcee
Confidence 4556666666666666556779999999999999998 44444
No 80
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=97.72 E-value=0.00018 Score=77.23 Aligned_cols=127 Identities=24% Similarity=0.349 Sum_probs=93.4
Q ss_pred cCCCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCcccccccccceeecchhhhcCCHHHHHHHhccccEEee
Q 001616 663 KDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMAR 742 (1044)
Q Consensus 663 ~D~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~ar 742 (1044)
..++-||++++++.++++|++..++|+.+...+..+.+..|+...- ..++.+.... ...
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F-----~~i~g~~~~~----------------~~K 145 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYF-----DVIVGGDDVP----------------PPK 145 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCcccc-----ceEEcCCCCC----------------CCC
Confidence 4567899999999999999999999999999999999999997642 1222212111 111
Q ss_pred cChhhHHHHHHHHHhcCCEEEEEcCCcCCHHHHhhCC---cceeeCCC-chHHHhhccCEEEccCChhHHHHHH
Q 001616 743 SSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEAD---VGLSMGIQ-GTEVAKESSDIVILDDDFTSVATVL 812 (1044)
Q Consensus 743 ~sP~~K~~lV~~lq~~g~vVa~~GDG~NDapaLk~Ad---VGiamg~~-gt~vAk~aaDivl~dd~f~~I~~~i 812 (1044)
-.|.....+.+.+.-..+.+.|+||..+|..|=|.|+ ||+..|.. +.+.....+|+++. ++..+...+
T Consensus 146 P~P~~l~~~~~~~~~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~--~~~el~~~l 217 (220)
T COG0546 146 PDPEPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVID--SLAELLALL 217 (220)
T ss_pred cCHHHHHHHHHHhCCChhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEEC--CHHHHHHHH
Confidence 2344444555555444346999999999999999998 78888853 56677778999987 677766554
No 81
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=97.68 E-value=0.00044 Score=74.24 Aligned_cols=38 Identities=13% Similarity=0.184 Sum_probs=35.6
Q ss_pred hhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCc
Q 001616 668 PGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGIL 705 (1044)
Q Consensus 668 ~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~ 705 (1044)
+.++++|+.++++|+++.++||.....++.+.+++|+.
T Consensus 19 ~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 19 QPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred HHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 44899999999999999999999999999999999975
No 82
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=97.62 E-value=0.00028 Score=74.78 Aligned_cols=125 Identities=18% Similarity=0.233 Sum_probs=83.6
Q ss_pred CCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCcccccccccceeecchhhhcCCHHHHHHHhccccEEeecC
Q 001616 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (1044)
Q Consensus 665 ~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~ar~s 744 (1044)
++.||+.+.++.|+++|+++.++||.+...+..+-+..|+... ...++.+.+.. ..+-.
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~-----f~~i~~~~~~~----------------~~KP~ 133 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPL-----FDHVIGSDEVP----------------RPKPA 133 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhh-----eeeEEecCcCC----------------CCCCC
Confidence 6789999999999999999999999999999999999998642 11122211110 11112
Q ss_pred hhhHHHHHHHHHhcCCEEEEEcCCcCCHHHHhhCCccee---eCC-CchHHHhhccCEEEccCChhHHHHHH
Q 001616 745 PFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLS---MGI-QGTEVAKESSDIVILDDDFTSVATVL 812 (1044)
Q Consensus 745 P~~K~~lV~~lq~~g~vVa~~GDG~NDapaLk~AdVGia---mg~-~gt~vAk~aaDivl~dd~f~~I~~~i 812 (1044)
|+-=..+++.++-..+.+.|+||+.+|..+-++|++... -|. +..+..++.+|+++. ++..+..++
T Consensus 134 ~~~~~~~~~~~~~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~~--~~~~l~~~~ 203 (205)
T TIGR01454 134 PDIVREALRLLDVPPEDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLLR--KPQSLLALC 203 (205)
T ss_pred hHHHHHHHHHcCCChhheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeeeC--CHHHHHHHh
Confidence 222223333333234668999999999999999998643 231 223456778999875 566665544
No 83
>PF12515 CaATP_NAI: Ca2+-ATPase N terminal autoinhibitory domain; InterPro: IPR024750 This entry represents the N-terminal autoinhibitory calmodulin-binding domain characteristic of certain calcium-transporting ATPases []. This domain binds calmodulin in a calcium-dependent fashion and has a conserved RRFR sequence motif. There are two completely conserved residues (F and W) that may be functionally important.; GO: 0005516 calmodulin binding
Probab=97.43 E-value=5.7e-05 Score=58.28 Aligned_cols=27 Identities=22% Similarity=0.257 Sum_probs=25.5
Q ss_pred cchHHHHhHHHHh-hhhhchhhhhhccc
Q 001616 22 TLTKAQKRWRLAY-WTIYSFRAMLSVLP 48 (1044)
Q Consensus 22 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 48 (1044)
+++++++|||+|+ +|+|++||||++++
T Consensus 13 ~s~e~l~rWR~a~~lv~N~~RRFR~~~d 40 (47)
T PF12515_consen 13 SSEEALRRWRQAVGLVKNARRRFRYTAD 40 (47)
T ss_pred CCHHHHHHHHHHhHHhccccceeeeccc
Confidence 7799999999999 99999999999986
No 84
>PLN02382 probable sucrose-phosphatase
Probab=97.43 E-value=0.0012 Score=77.38 Aligned_cols=147 Identities=19% Similarity=0.171 Sum_probs=90.6
Q ss_pred CchhHHHHH-HHHHhcCCEEEEEcCCCHHHHHHHHHHcCCcccccc--cccceeecchhh--------------------
Q 001616 666 CRPGVQKAV-EACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQ--VEKGEVVEGVEF-------------------- 722 (1044)
Q Consensus 666 lR~~v~~aI-~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~~~~~--~~~~~vi~g~~~-------------------- 722 (1044)
+.+...+++ +++++.|+..+..||.....++.+.++.++..++.. .++..+..+...
T Consensus 29 ~s~~~~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt~I~~~~~~~~d~~w~~~l~~~w~~~~v~ 108 (413)
T PLN02382 29 LSLLRFNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGTEIAYGESMVPDHGWVEYLNKKWDREIVV 108 (413)
T ss_pred hhHHHHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCcEEEeCCCCccChhHHHHHhccCChhhHH
Confidence 333344555 889999999999999999999999999998765310 011111110000
Q ss_pred ---hcC--------------------CH-------HHHHHHhc----cccE------EeecChh--hHHHHHHHHHhc--
Q 001616 723 ---RNY--------------------TD-------EERIQKVD----KIRV------MARSSPF--DKLLMVQCLKKK-- 758 (1044)
Q Consensus 723 ---~~~--------------------~~-------~~~~~~~~----~~~V------~ar~sP~--~K~~lV~~lq~~-- 758 (1044)
..+ .+ +++.+.+. ++.+ +-...|. .|..-++.|.++
T Consensus 109 ~~~~~~~~l~~q~~~~~~~~Ki~~~~~~~~~~~~~~~l~~~~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~~ 188 (413)
T PLN02382 109 EETSKFPELKLQPETEQRPHKVSFYVDKKKAQEVIKELSERLEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKLK 188 (413)
T ss_pred HHHhcCCCcccCCcccCCCeEEEEEechHHhHHHHHHHHHHHHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHhh
Confidence 000 00 11111121 1121 1233443 588888888665
Q ss_pred --C---CEEEEEcCCcCCHHHHhhCC-cceeeCCCchHHHhhcc--------CEEEcc-CChhHHHHHHH
Q 001616 759 --G---HVVAVTGDGTNDAPALKEAD-VGLSMGIQGTEVAKESS--------DIVILD-DDFTSVATVLR 813 (1044)
Q Consensus 759 --g---~vVa~~GDG~NDapaLk~Ad-VGiamg~~gt~vAk~aa--------Divl~d-d~f~~I~~~i~ 813 (1044)
| ..+.++||+.||.+||+.|+ .||+|| ++.+..|+.+ +++..+ .+-.+|..+++
T Consensus 189 ~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~-NA~~elk~~a~~~~~~~~~~~~a~~~~~~GI~~al~ 257 (413)
T PLN02382 189 AEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVS-NAQEELLQWYAENAKDNPKIIHATERCAAGIIQAIG 257 (413)
T ss_pred hcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEc-CCcHHHHHHHHhhccCCCcEEEcCCCCccHHHHHHH
Confidence 2 36899999999999999999 699999 7888777642 555443 24455665553
No 85
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=97.37 E-value=0.0012 Score=79.90 Aligned_cols=39 Identities=10% Similarity=0.090 Sum_probs=35.9
Q ss_pred chhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCc
Q 001616 667 RPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGIL 705 (1044)
Q Consensus 667 R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~ 705 (1044)
-+.+.++|+.++++|+.++++||.....+..+++++|+.
T Consensus 435 ~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~ 473 (694)
T PRK14502 435 YSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIK 473 (694)
T ss_pred CHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 356799999999999999999999999999999999974
No 86
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=97.31 E-value=0.0014 Score=71.78 Aligned_cols=42 Identities=5% Similarity=0.055 Sum_probs=38.5
Q ss_pred CCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCcc
Q 001616 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILR 706 (1044)
Q Consensus 665 ~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~ 706 (1044)
..-+.++++|++|+++||.|++.||........+.+++|+..
T Consensus 18 ~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~ 59 (302)
T PRK12702 18 NSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEH 59 (302)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCC
Confidence 455779999999999999999999999999999999999864
No 87
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=97.27 E-value=0.0013 Score=70.24 Aligned_cols=124 Identities=16% Similarity=0.175 Sum_probs=82.7
Q ss_pred CchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCcccccccccceeecchhhhcCCHHHHHHHhccccEEeecCh
Q 001616 666 CRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSP 745 (1044)
Q Consensus 666 lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~ar~sP 745 (1044)
+.||+.++++.|+++|+++.++|+.....+..+-+..|+... ...++.+++.. ..+..|
T Consensus 83 ~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~-----f~~i~~~~~~~----------------~~Kp~p 141 (214)
T PRK13288 83 EYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEF-----FDVVITLDDVE----------------HAKPDP 141 (214)
T ss_pred cCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhc-----eeEEEecCcCC----------------CCCCCc
Confidence 679999999999999999999999999999999999998642 12222222111 011222
Q ss_pred hhHHHHHHHHHhcCCEEEEEcCCcCCHHHHhhCCcc---eeeCCCch-HHHhhccCEEEccCChhHHHHHH
Q 001616 746 FDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVG---LSMGIQGT-EVAKESSDIVILDDDFTSVATVL 812 (1044)
Q Consensus 746 ~~K~~lV~~lq~~g~vVa~~GDG~NDapaLk~AdVG---iamg~~gt-~vAk~aaDivl~dd~f~~I~~~i 812 (1044)
+--..+.+.+.-....+.++||+.+|..|-++|++- +.-|.... +.....+|+++. ++..+..++
T Consensus 142 ~~~~~~~~~~~~~~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i~--~~~~l~~~i 210 (214)
T PRK13288 142 EPVLKALELLGAKPEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFMLD--KMSDLLAIV 210 (214)
T ss_pred HHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEEC--CHHHHHHHH
Confidence 222333333333345688999999999999999984 43442222 234456888875 677776654
No 88
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=97.27 E-value=0.0013 Score=72.93 Aligned_cols=124 Identities=23% Similarity=0.294 Sum_probs=80.9
Q ss_pred CCCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCcccccccccceeecchhhhcCCHHHHHHHhccccEEeec
Q 001616 664 DPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARS 743 (1044)
Q Consensus 664 D~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~ar~ 743 (1044)
.++.|++.++++.|+++|+++.++||-+...+..+..+.|+... ...++.+.+. .+.
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~-----f~~i~~~d~~------------------~~~ 156 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRY-----FRWIIGGDTL------------------PQK 156 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhh-----CeEEEecCCC------------------CCC
Confidence 46889999999999999999999999999999988888887532 1122222111 111
Q ss_pred Chh--hHHHHHHHHHhcCCEEEEEcCCcCCHHHHhhCCcc-eee--CCC-chHHHhhccCEEEccCChhHHHHHH
Q 001616 744 SPF--DKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVG-LSM--GIQ-GTEVAKESSDIVILDDDFTSVATVL 812 (1044)
Q Consensus 744 sP~--~K~~lV~~lq~~g~vVa~~GDG~NDapaLk~AdVG-iam--g~~-gt~vAk~aaDivl~dd~f~~I~~~i 812 (1044)
.|. -=..+.+.+.-..+.+.++||+.||..|-+.|++- +++ |.. ..+..+..+|.++. ++..+..++
T Consensus 157 Kp~p~~~~~~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi~--~l~el~~~~ 229 (272)
T PRK13223 157 KPDPAALLFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVID--DLRALLPGC 229 (272)
T ss_pred CCCcHHHHHHHHHhCCChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEEC--CHHHHHHHH
Confidence 221 11222222222245688999999999999999973 333 321 22234567898884 677766543
No 89
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=97.21 E-value=0.0013 Score=70.02 Aligned_cols=120 Identities=15% Similarity=0.253 Sum_probs=80.3
Q ss_pred CCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCcccccccccceeecchhhhcCCHHHHHHHhccccEEeecC
Q 001616 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (1044)
Q Consensus 665 ~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~ar~s 744 (1044)
++.||+.++++.|++.|+++.++|+-+...+..+.+..|+... ...++.+.+. .+..
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~-----f~~~~~~~~~------------------~~~K 141 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKY-----FSVLIGGDSL------------------AQRK 141 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhh-----CcEEEecCCC------------------CCCC
Confidence 5789999999999999999999999999999999999998642 1122222111 1222
Q ss_pred hhhHHHHHHHHHhc---CCEEEEEcCCcCCHHHHhhCCcceee---CCCc-hHHHhhccCEEEccCChhHHHH
Q 001616 745 PFDKLLMVQCLKKK---GHVVAVTGDGTNDAPALKEADVGLSM---GIQG-TEVAKESSDIVILDDDFTSVAT 810 (1044)
Q Consensus 745 P~~K~~lV~~lq~~---g~vVa~~GDG~NDapaLk~AdVGiam---g~~g-t~vAk~aaDivl~dd~f~~I~~ 810 (1044)
|. ...+.+.+++. .+.+.++||+.||..|.++|++-... |-.. .+.....+|+++. ++..+..
T Consensus 142 p~-p~~~~~~~~~~~~~~~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i~--~~~~l~~ 211 (213)
T TIGR01449 142 PH-PDPLLLAAERLGVAPQQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLYD--SLNELPP 211 (213)
T ss_pred CC-hHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEeC--CHHHHHh
Confidence 31 12333344443 35588999999999999999986542 2111 1233456888875 5555443
No 90
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=97.06 E-value=0.0048 Score=68.25 Aligned_cols=141 Identities=13% Similarity=0.243 Sum_probs=84.7
Q ss_pred CCchhHHHHHHHHHh-cCCEEEEEcCCCHHHHHHHHHHcCCc--cccccc----cc------------------------
Q 001616 665 PCRPGVQKAVEACQS-AGVEIKMITGDNVFTAKAIATECGIL--RLDQQV----EK------------------------ 713 (1044)
Q Consensus 665 ~lR~~v~~aI~~l~~-aGI~v~mlTGD~~~tA~aIA~~~GI~--~~~~~~----~~------------------------ 713 (1044)
.+-++++++|+.|++ .|+.+.++||.....+..+.+..++. ..+... ..
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~~~i~~~l~~~~~ 115 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAIARDISVQLHTALA 115 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCeeeccCChhHHHHHHHHHHHHhc
Confidence 345889999999998 89999999999999999888776642 111100 00
Q ss_pred ---ceeecchh------hhcCC--HHH---HHHH----hccccE-----EeecCh--hhHHHHHHHHHhc----CCEEEE
Q 001616 714 ---GEVVEGVE------FRNYT--DEE---RIQK----VDKIRV-----MARSSP--FDKLLMVQCLKKK----GHVVAV 764 (1044)
Q Consensus 714 ---~~vi~g~~------~~~~~--~~~---~~~~----~~~~~V-----~ar~sP--~~K~~lV~~lq~~----g~vVa~ 764 (1044)
+..++-++ ++... ++. +.+. .+...+ +....| .+|..-++.+.+. ...|.+
T Consensus 116 ~~pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v~~ 195 (266)
T PRK10187 116 QLPGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQEAPFAGRTPVF 195 (266)
T ss_pred cCCCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHhcCCCCCeEEE
Confidence 00000000 01111 111 1111 111111 122233 3788888776654 356889
Q ss_pred EcCCcCCHHHHhhC----CcceeeCCCchHHHhhccCEEEccCChhHHHHHH
Q 001616 765 TGDGTNDAPALKEA----DVGLSMGIQGTEVAKESSDIVILDDDFTSVATVL 812 (1044)
Q Consensus 765 ~GDG~NDapaLk~A----dVGiamg~~gt~vAk~aaDivl~dd~f~~I~~~i 812 (1044)
+||+.||.+|++.+ +.||+|| ++. ..|++.|. +...+...+
T Consensus 196 ~GD~~nD~~mf~~~~~~~g~~vavg-~a~----~~A~~~l~--~~~~v~~~L 240 (266)
T PRK10187 196 VGDDLTDEAGFAVVNRLGGISVKVG-TGA----TQASWRLA--GVPDVWSWL 240 (266)
T ss_pred EcCCccHHHHHHHHHhcCCeEEEEC-CCC----CcCeEeCC--CHHHHHHHH
Confidence 99999999999999 9999999 443 44677766 444444433
No 91
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=97.04 E-value=0.005 Score=67.71 Aligned_cols=131 Identities=18% Similarity=0.264 Sum_probs=82.7
Q ss_pred CCCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCccccccc-------ccceeecchhhhcCCHHHHHHHhcc
Q 001616 664 DPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQV-------EKGEVVEGVEFRNYTDEERIQKVDK 736 (1044)
Q Consensus 664 D~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~~~~~~-------~~~~vi~g~~~~~~~~~~~~~~~~~ 736 (1044)
-++|||+.+.++.|+++|+++.++||-....+..+.++.|+...+... +..-+.+|.. . |-
T Consensus 120 l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGvltG~~--~----------P~ 187 (277)
T TIGR01544 120 VMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDEDGVLKGFK--G----------PL 187 (277)
T ss_pred CccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECCCCeEeCCC--C----------Cc
Confidence 467999999999999999999999999999999999999986433211 0111222311 0 00
Q ss_pred ccEEeecChhhHHHHHHH-----HH--hcCCEEEEEcCCcCCHHHHhhC---CcceeeCC--Cch----HHHhhccCEEE
Q 001616 737 IRVMARSSPFDKLLMVQC-----LK--KKGHVVAVTGDGTNDAPALKEA---DVGLSMGI--QGT----EVAKESSDIVI 800 (1044)
Q Consensus 737 ~~V~ar~sP~~K~~lV~~-----lq--~~g~vVa~~GDG~NDapaLk~A---dVGiamg~--~gt----~vAk~aaDivl 800 (1044)
+ ....|...+.. ++ .....|.++|||.||++|-.-. +--+.+|- .-. +.=+++=||||
T Consensus 188 --i----~~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~igfln~~~e~~l~~y~~~~Divl 261 (277)
T TIGR01544 188 --I----HTFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVL 261 (277)
T ss_pred --c----cccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEEEecccCHHHHHHHHHHhCCEEE
Confidence 1 11345544332 22 1235688999999999995433 11222331 111 23467889999
Q ss_pred ccCChhHHHHHH
Q 001616 801 LDDDFTSVATVL 812 (1044)
Q Consensus 801 ~dd~f~~I~~~i 812 (1044)
.+|.=-.++..+
T Consensus 262 ~~D~t~~v~~~i 273 (277)
T TIGR01544 262 VQDETLEVANSI 273 (277)
T ss_pred ECCCCchHHHHH
Confidence 998666666554
No 92
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=97.02 E-value=0.0023 Score=68.73 Aligned_cols=120 Identities=18% Similarity=0.277 Sum_probs=80.2
Q ss_pred CCCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCcccccccccceeecchhhhcCCHHHHHHHhccccEEeec
Q 001616 664 DPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARS 743 (1044)
Q Consensus 664 D~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~ar~ 743 (1044)
-++.||+.++++.|++.|+++.++|+........+.+..||... ...++.+.+.. ..
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~-----f~~~~~~~~~~------------------~~ 147 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDY-----FDALASAEKLP------------------YS 147 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhc-----ccEEEEcccCC------------------CC
Confidence 35789999999999999999999999999999999999998653 12233222211 11
Q ss_pred ChhhHHHHHHHHHhcC---CEEEEEcCCcCCHHHHhhCCcceeeCCCc---hHHHhhccCEEEccCChhHHH
Q 001616 744 SPFDKLLMVQCLKKKG---HVVAVTGDGTNDAPALKEADVGLSMGIQG---TEVAKESSDIVILDDDFTSVA 809 (1044)
Q Consensus 744 sP~~K~~lV~~lq~~g---~vVa~~GDG~NDapaLk~AdVGiamg~~g---t~vAk~aaDivl~dd~f~~I~ 809 (1044)
.|.-. -+.+.+++.| +.+.++||..||+.+-++|++....-..+ .+.-...+|+++. +|..+.
T Consensus 148 Kp~~~-~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~--~~~dl~ 216 (222)
T PRK10826 148 KPHPE-VYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKLE--SLTELT 216 (222)
T ss_pred CCCHH-HHHHHHHHcCCCHHHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheecc--CHHHHh
Confidence 22221 3334444443 45889999999999999999875432122 2222335777765 566543
No 93
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=96.99 E-value=0.0032 Score=68.00 Aligned_cols=127 Identities=15% Similarity=0.193 Sum_probs=85.0
Q ss_pred CCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCcccccccccceeecchhhhcCCHHHHHHHhccccEEeecC
Q 001616 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (1044)
Q Consensus 665 ~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~ar~s 744 (1044)
++.||+.+.++.|++.|+++.++|+.+...+..+-+..|+... ...++.+.... ...-.
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~-----f~~i~~~~~~~----------------~~KP~ 153 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQR-----CAVLIGGDTLA----------------ERKPH 153 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhc-----ccEEEecCcCC----------------CCCCC
Confidence 5689999999999999999999999999988888888888642 12233222110 11122
Q ss_pred hhhHHHHHHHHHhcCCEEEEEcCCcCCHHHHhhCCccee---eCCC-c-hHHHhhccCEEEccCChhHHHHHHHH
Q 001616 745 PFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLS---MGIQ-G-TEVAKESSDIVILDDDFTSVATVLRW 814 (1044)
Q Consensus 745 P~~K~~lV~~lq~~g~vVa~~GDG~NDapaLk~AdVGia---mg~~-g-t~vAk~aaDivl~dd~f~~I~~~i~~ 814 (1044)
|+-=..+++.+.-..+.+.|+||+.||..|-+.|++... -|.. . .+.....+|+++. ++..+...+.|
T Consensus 154 p~~~~~~~~~l~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i~--~~~el~~~~~~ 226 (229)
T PRK13226 154 PLPLLVAAERIGVAPTDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLVE--QPQLLWNPATW 226 (229)
T ss_pred HHHHHHHHHHhCCChhhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeeeC--CHHHHHHHhcC
Confidence 322233444443335668999999999999999987643 2311 1 1223456899885 67777776655
No 94
>PTZ00174 phosphomannomutase; Provisional
Probab=96.92 E-value=0.005 Score=67.40 Aligned_cols=53 Identities=21% Similarity=0.332 Sum_probs=42.9
Q ss_pred hhHHHHHHHHHhcCCEEEEEcC----CcCCHHHHhhC-CcceeeCCCchHHHhhccCEE
Q 001616 746 FDKLLMVQCLKKKGHVVAVTGD----GTNDAPALKEA-DVGLSMGIQGTEVAKESSDIV 799 (1044)
Q Consensus 746 ~~K~~lV~~lq~~g~vVa~~GD----G~NDapaLk~A-dVGiamg~~gt~vAk~aaDiv 799 (1044)
-+|..-++.|.+.-+.|+++|| |-||.+||+.| -.|++++ +..+..|..+.++
T Consensus 187 vsKg~al~~L~~~~~eviafGD~~~~~~NDieMl~~~~~~g~~v~-n~~~~~~~~~~~~ 244 (247)
T PTZ00174 187 WDKTYCLRHLENDFKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVK-NPEDTIKILKELF 244 (247)
T ss_pred CcHHHHHHHHHhhhhhEEEEcccCCCCCCcHhhhhcCCCceEEeC-CHHHHHHHHHHHh
Confidence 3788888888777778999999 99999999976 5778777 7888887766544
No 95
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=96.75 E-value=0.0056 Score=64.74 Aligned_cols=39 Identities=23% Similarity=0.377 Sum_probs=35.8
Q ss_pred CCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcC
Q 001616 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECG 703 (1044)
Q Consensus 665 ~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~G 703 (1044)
++.+++.+++++|++.|+++.++||.....+..+.++++
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~ 55 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLP 55 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCC
Confidence 477999999999999999999999999999999998754
No 96
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=96.69 E-value=0.011 Score=65.78 Aligned_cols=119 Identities=15% Similarity=0.208 Sum_probs=81.6
Q ss_pred CCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCcccccccccceeecchhhhcCCHHHHHHHhccccEEeecC
Q 001616 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (1044)
Q Consensus 665 ~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~ar~s 744 (1044)
++.||+.+.++.|++.|+++.++|+.+...+..+-+.+|+... ...++.+.+.
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~-----F~~vi~~~~~---------------------- 194 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSL-----FSVVQAGTPI---------------------- 194 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhh-----eEEEEecCCC----------------------
Confidence 5679999999999999999999999999999999999998653 1223322211
Q ss_pred hhhHHHHHHHHHhc---CCEEEEEcCCcCCHHHHhhCCccee---eCCCc-hHHHhhccCEEEccCChhHHHHHH
Q 001616 745 PFDKLLMVQCLKKK---GHVVAVTGDGTNDAPALKEADVGLS---MGIQG-TEVAKESSDIVILDDDFTSVATVL 812 (1044)
Q Consensus 745 P~~K~~lV~~lq~~---g~vVa~~GDG~NDapaLk~AdVGia---mg~~g-t~vAk~aaDivl~dd~f~~I~~~i 812 (1044)
+..+..+.+.+++. .+.++++||+.+|..|-++|++-.. -|... .+.....+|+++. ++..+..++
T Consensus 195 ~~k~~~~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i~--~~~eL~~~~ 267 (273)
T PRK13225 195 LSKRRALSQLVAREGWQPAAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLLE--TPSDLLQAV 267 (273)
T ss_pred CCCHHHHHHHHHHhCcChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEEC--CHHHHHHHH
Confidence 01122223333333 3568999999999999999988643 23111 1233456899875 677776654
No 97
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=96.66 E-value=0.0084 Score=64.15 Aligned_cols=122 Identities=24% Similarity=0.352 Sum_probs=82.0
Q ss_pred CCCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCc--ccccccccceeecchhhhcCCHHHHHHHhccccEEe
Q 001616 664 DPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGIL--RLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMA 741 (1044)
Q Consensus 664 D~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~--~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~a 741 (1044)
.++.||+.+.++.|++.|+++.++|+-....+..+.+..|+. +. ...++.+.+..
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~-----f~~i~~~~~~~------------------ 142 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDD-----VDAVVCPSDVA------------------ 142 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhcc-----CCEEEcCCcCC------------------
Confidence 478999999999999999999999999999999999999986 32 12233332211
Q ss_pred ecChhhHHHHHHHHHhcC----CEEEEEcCCcCCHHHHhhCCcceeeC-CCch----HHHhhccCEEEccCChhHHHHH
Q 001616 742 RSSPFDKLLMVQCLKKKG----HVVAVTGDGTNDAPALKEADVGLSMG-IQGT----EVAKESSDIVILDDDFTSVATV 811 (1044)
Q Consensus 742 r~sP~~K~~lV~~lq~~g----~vVa~~GDG~NDapaLk~AdVGiamg-~~gt----~vAk~aaDivl~dd~f~~I~~~ 811 (1044)
+..|.. ..+-+.+++.| +.+.|+||+.+|..|-+.|++..+++ ..|. +.....+|.++. ++..+..+
T Consensus 143 ~~KP~p-~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~i~--~~~~l~~~ 218 (220)
T TIGR03351 143 AGRPAP-DLILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPHTHVLD--SVADLPAL 218 (220)
T ss_pred CCCCCH-HHHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCCceeec--CHHHHHHh
Confidence 122321 12233444432 56899999999999999999986322 1222 222345787774 56665443
No 98
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=96.64 E-value=0.0086 Score=63.82 Aligned_cols=106 Identities=13% Similarity=0.114 Sum_probs=73.8
Q ss_pred CCchhHHHHHH-HHHhcCCEEEEEcCCCHHHHHHHHHHcCCcccccccccceeecchhhhcCCHHHHHHHhccccEEeec
Q 001616 665 PCRPGVQKAVE-ACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARS 743 (1044)
Q Consensus 665 ~lR~~v~~aI~-~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~ar~ 743 (1044)
.++|++.+.|+ .++++|++++++|+=....++.+|+..|+..... ++ |.+++.... .+ ..-..|
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~~~------~i-~t~le~~~g-------g~-~~g~~c 158 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHRLN------LI-ASQIERGNG-------GW-VLPLRC 158 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccccCc------EE-EEEeEEeCC-------ce-EcCccC
Confidence 46899999996 7888999999999999999999999966643211 11 222221000 00 012346
Q ss_pred ChhhHHHHHHHHH-hcCCEEEEEcCCcCCHHHHhhCCcceeeC
Q 001616 744 SPFDKLLMVQCLK-KKGHVVAVTGDGTNDAPALKEADVGLSMG 785 (1044)
Q Consensus 744 sP~~K~~lV~~lq-~~g~vVa~~GDG~NDapaLk~AdVGiamg 785 (1044)
.-++|..-++..- ...+..-+=||..||.|||+.||-.++++
T Consensus 159 ~g~~Kv~rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vn 201 (210)
T TIGR01545 159 LGHEKVAQLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRWRVS 201 (210)
T ss_pred CChHHHHHHHHHhCCChhheEEecCCcccHHHHHhCCCcEEEC
Confidence 6788988666442 22233457899999999999999999986
No 99
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=96.50 E-value=0.016 Score=63.95 Aligned_cols=122 Identities=12% Similarity=0.133 Sum_probs=79.1
Q ss_pred CCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCcccccccccceeecchhhhcCCHHHHHHHhccccEEeecC
Q 001616 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (1044)
Q Consensus 665 ~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~ar~s 744 (1044)
++.||+++.++.|+++|+++.++|+-....+..+-+.+|+... ...++.+.+... ..-.
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~-----Fd~ii~~~d~~~----------------~KP~ 167 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGF-----FSVVLAAEDVYR----------------GKPD 167 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhh-----CcEEEecccCCC----------------CCCC
Confidence 4689999999999999999999999999999999999998653 233444433211 1111
Q ss_pred hhhHHHHHHHHHhcCCEEEEEcCCcCCHHHHhhCCcce-eeCCCchHHHhhccCEEEccCChhHHH
Q 001616 745 PFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGL-SMGIQGTEVAKESSDIVILDDDFTSVA 809 (1044)
Q Consensus 745 P~~K~~lV~~lq~~g~vVa~~GDG~NDapaLk~AdVGi-amg~~gt~vAk~aaDivl~dd~f~~I~ 809 (1044)
|+-=...++.+.-..+.+.|+||..+|..|-+.|++-. ++...+.......+|+++. +++.+.
T Consensus 168 Pe~~~~a~~~l~~~p~~~l~IgDs~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi~--~~~el~ 231 (260)
T PLN03243 168 PEMFMYAAERLGFIPERCIVFGNSNSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVVR--RLDDLS 231 (260)
T ss_pred HHHHHHHHHHhCCChHHeEEEcCCHHHHHHHHHcCCEEEEEecCCchhhhccCCEEeC--CHHHHH
Confidence 22112222333222345889999999999999999843 2221222222335788765 555543
No 100
>PRK11590 hypothetical protein; Provisional
Probab=96.47 E-value=0.014 Score=62.12 Aligned_cols=105 Identities=14% Similarity=0.137 Sum_probs=74.0
Q ss_pred CCchhHHHHH-HHHHhcCCEEEEEcCCCHHHHHHHHHHcCCcccccccccceeecchhhhc-CCHHHHHHHhccccEEee
Q 001616 665 PCRPGVQKAV-EACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRN-YTDEERIQKVDKIRVMAR 742 (1044)
Q Consensus 665 ~lR~~v~~aI-~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~g~~~~~-~~~~~~~~~~~~~~V~ar 742 (1044)
+++|++.+.| +.+++.|+++.++|+-...-++.+++.+|+.... . ++ |.+++. ++ .++ .-..
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~~~-----~-~i-~t~l~~~~t--------g~~-~g~~ 158 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLPRV-----N-LI-ASQMQRRYG--------GWV-LTLR 158 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccccC-----c-eE-EEEEEEEEc--------cEE-CCcc
Confidence 4589999999 5788899999999999999999999999963211 1 11 222211 00 000 1123
Q ss_pred cChhhHHHHHHHH-HhcCCEEEEEcCCcCCHHHHhhCCcceeeC
Q 001616 743 SSPFDKLLMVQCL-KKKGHVVAVTGDGTNDAPALKEADVGLSMG 785 (1044)
Q Consensus 743 ~sP~~K~~lV~~l-q~~g~vVa~~GDG~NDapaLk~AdVGiamg 785 (1044)
|..+.|..-++.. .......-+=||..||.|||+.|+-+++++
T Consensus 159 c~g~~K~~~l~~~~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~vn 202 (211)
T PRK11590 159 CLGHEKVAQLERKIGTPLRLYSGYSDSKQDNPLLYFCQHRWRVT 202 (211)
T ss_pred CCChHHHHHHHHHhCCCcceEEEecCCcccHHHHHhCCCCEEEC
Confidence 6778898876654 322334457799999999999999999986
No 101
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=96.44 E-value=0.017 Score=63.15 Aligned_cols=116 Identities=16% Similarity=0.117 Sum_probs=78.0
Q ss_pred CCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCcccccccccceeecchhhhcCCHHHHHHHhccccEEeecC
Q 001616 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (1044)
Q Consensus 665 ~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~ar~s 744 (1044)
++.||+.+.++.|++.|+++.++|+-....+..+-+..|+... ...++.+.+... .+-.
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~-----Fd~iv~~~~~~~----------------~KP~ 166 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDF-----FQAVIIGSECEH----------------AKPH 166 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhh-----CcEEEecCcCCC----------------CCCC
Confidence 4679999999999999999999999999999999999998753 223444433211 1122
Q ss_pred hhhHHHHHHHHHhcCCEEEEEcCCcCCHHHHhhCCccee---eCCCchHHHhhccCEEEc
Q 001616 745 PFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLS---MGIQGTEVAKESSDIVIL 801 (1044)
Q Consensus 745 P~~K~~lV~~lq~~g~vVa~~GDG~NDapaLk~AdVGia---mg~~gt~vAk~aaDivl~ 801 (1044)
|+-=....+.+.-..+.+.|+||..+|..|=++|++-.. -|....+.....+|+++.
T Consensus 167 p~~~~~a~~~~~~~~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~ 226 (248)
T PLN02770 167 PDPYLKALEVLKVSKDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIK 226 (248)
T ss_pred hHHHHHHHHHhCCChhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEec
Confidence 222223333333334568999999999999999987532 221122233456888886
No 102
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=96.44 E-value=0.031 Score=70.91 Aligned_cols=141 Identities=17% Similarity=0.212 Sum_probs=85.0
Q ss_pred CCchhHHHHHHHHHh-cCCEEEEEcCCCHHHHHHHHHHcCC--ccccccc----cc------------------------
Q 001616 665 PCRPGVQKAVEACQS-AGVEIKMITGDNVFTAKAIATECGI--LRLDQQV----EK------------------------ 713 (1044)
Q Consensus 665 ~lR~~v~~aI~~l~~-aGI~v~mlTGD~~~tA~aIA~~~GI--~~~~~~~----~~------------------------ 713 (1044)
.+-+++.++++.|.+ .|+.|+++||.............++ ...+... ..
T Consensus 514 ~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~~~l~liaenG~~i~~~~~~w~~~~~~~~~w~~~v~~il~~~~ 593 (726)
T PRK14501 514 VPDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFGDLPIHLVAEHGAWSRAPGGEWQLLEPVATEWKDAVRPILEEFV 593 (726)
T ss_pred CCCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhCCCCeEEEEeCCEEEeCCCCceEECCCcchhHHHHHHHHHHHHH
Confidence 367899999999999 6999999999999988887665543 1111100 00
Q ss_pred ----ceeecchhh------hcCCH-------HHHHHHhcc------ccEE-----eecCh--hhHHHHHHHHHhc--CCE
Q 001616 714 ----GEVVEGVEF------RNYTD-------EERIQKVDK------IRVM-----ARSSP--FDKLLMVQCLKKK--GHV 761 (1044)
Q Consensus 714 ----~~vi~g~~~------~~~~~-------~~~~~~~~~------~~V~-----ar~sP--~~K~~lV~~lq~~--g~v 761 (1044)
+..++.++. ++..+ +++.+.+.. +.+. -...| -+|...++.+.+. -..
T Consensus 594 ~~~~gs~ie~k~~~l~~~~r~~d~~~~~~~a~~l~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll~~~~~d~ 673 (726)
T PRK14501 594 DRTPGSFIEEKEASLAWHYRNADPELGEARANELILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLLEAGPYDF 673 (726)
T ss_pred hcCCCcEEEEcceEEEEEccCCCHHHHHHHHHHHHHHHHHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHHhcCCCCE
Confidence 000000000 00000 111111111 1111 12223 4799988888874 357
Q ss_pred EEEEcCCcCCHHHHhhC---CcceeeCCCchHHHhhccCEEEccCChhHHHHHH
Q 001616 762 VAVTGDGTNDAPALKEA---DVGLSMGIQGTEVAKESSDIVILDDDFTSVATVL 812 (1044)
Q Consensus 762 Va~~GDG~NDapaLk~A---dVGiamg~~gt~vAk~aaDivl~dd~f~~I~~~i 812 (1044)
|+++||+.||.+|++.+ ..+++|| + ++.+|++.+.+ -..+..++
T Consensus 674 vl~~GD~~nDe~Mf~~~~~~~~~v~vG-~----~~s~A~~~l~~--~~eV~~~L 720 (726)
T PRK14501 674 VLAIGDDTTDEDMFRALPETAITVKVG-P----GESRARYRLPS--QREVRELL 720 (726)
T ss_pred EEEECCCCChHHHHHhcccCceEEEEC-C----CCCcceEeCCC--HHHHHHHH
Confidence 99999999999999986 5889998 3 35678888874 24455444
No 103
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=96.29 E-value=0.022 Score=62.54 Aligned_cols=94 Identities=17% Similarity=0.192 Sum_probs=67.5
Q ss_pred CCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCcccccccccceeecchhhhcCCHHHHHHHhccccEEeecC
Q 001616 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (1044)
Q Consensus 665 ~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~ar~s 744 (1044)
++.||+.+.++.|+++|+++.++||.....+..+-+..|+.... ...++.+.+. .+..
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f----~d~ii~~~~~------------------~~~K 156 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYR----PDYNVTTDDV------------------PAGR 156 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCC----CceEEccccC------------------CCCC
Confidence 35799999999999999999999999999999999999886521 0223332221 1123
Q ss_pred hhhHHHHHHHHHhcC----CEEEEEcCCcCCHHHHhhCCcc
Q 001616 745 PFDKLLMVQCLKKKG----HVVAVTGDGTNDAPALKEADVG 781 (1044)
Q Consensus 745 P~~K~~lV~~lq~~g----~vVa~~GDG~NDapaLk~AdVG 781 (1044)
| +...+.+.+++.| +.+.|+||..+|..|=+.|++-
T Consensus 157 P-~p~~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~ 196 (253)
T TIGR01422 157 P-APWMALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMW 196 (253)
T ss_pred C-CHHHHHHHHHHcCCCCchheEEECCcHHHHHHHHHCCCe
Confidence 3 2233445555544 3488999999999999999864
No 104
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=96.17 E-value=0.032 Score=61.81 Aligned_cols=123 Identities=15% Similarity=0.172 Sum_probs=81.7
Q ss_pred CCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCcccccccccceeecchhhhcCCHHHHHHHhccccEEeecC
Q 001616 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (1044)
Q Consensus 665 ~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~ar~s 744 (1044)
++-||+.+.++.|++.|+++.++||.....+..+-+..|+.... ...++.+.+. .+..
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~----~d~i~~~~~~------------------~~~K 158 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYR----PDHVVTTDDV------------------PAGR 158 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCC----ceEEEcCCcC------------------CCCC
Confidence 46799999999999999999999999999888888877765421 0122222211 1122
Q ss_pred hhhHHHHHHHHHhcC----CEEEEEcCCcCCHHHHhhCCc---ceeeCCCc------------------------hHHHh
Q 001616 745 PFDKLLMVQCLKKKG----HVVAVTGDGTNDAPALKEADV---GLSMGIQG------------------------TEVAK 793 (1044)
Q Consensus 745 P~~K~~lV~~lq~~g----~vVa~~GDG~NDapaLk~AdV---Giamg~~g------------------------t~vAk 793 (1044)
| +...+.+.+++.| +.+.|+||+.+|..|=+.|++ |+.-|... .+...
T Consensus 159 P-~p~~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 237 (267)
T PRK13478 159 P-YPWMALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGMWTVGVILSGNELGLSEEEYQALSAAELAARRERARARLRA 237 (267)
T ss_pred C-ChHHHHHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCCEEEEEccCcccccCCHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 3 2233445555543 458999999999999999996 55544220 12334
Q ss_pred hccCEEEccCChhHHHHHH
Q 001616 794 ESSDIVILDDDFTSVATVL 812 (1044)
Q Consensus 794 ~aaDivl~dd~f~~I~~~i 812 (1044)
..+|+++. ++..+...+
T Consensus 238 ~~a~~vi~--~~~~l~~~l 254 (267)
T PRK13478 238 AGAHYVID--TIADLPAVI 254 (267)
T ss_pred cCCCeehh--hHHHHHHHH
Confidence 56888885 566666554
No 105
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=96.15 E-value=0.014 Score=61.39 Aligned_cols=94 Identities=17% Similarity=0.128 Sum_probs=66.3
Q ss_pred cCCCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCcccccccccceeecchhhhcCCHHHHHHHhccccEEee
Q 001616 663 KDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMAR 742 (1044)
Q Consensus 663 ~D~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~ar 742 (1044)
.+++.++++++++.|++.|+++.++||-....+..+-+.+|+... ...++.+.+ +..+
T Consensus 104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~-----f~~~~~~~~-----------------~~~K 161 (197)
T TIGR01548 104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEIL-----FPVQIWMED-----------------CPPK 161 (197)
T ss_pred ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhh-----CCEEEeecC-----------------CCCC
Confidence 455677889999999999999999999999999999999998642 112222221 1113
Q ss_pred cChhhHHHHHHHHHhcCCEEEEEcCCcCCHHHHhhC
Q 001616 743 SSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEA 778 (1044)
Q Consensus 743 ~sP~~K~~lV~~lq~~g~vVa~~GDG~NDapaLk~A 778 (1044)
-.|+--....+.+.-..+.+.|+||+.+|..|-+.|
T Consensus 162 P~p~~~~~~~~~~~~~~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 162 PNPEPLILAAKALGVEACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred cCHHHHHHHHHHhCcCcccEEEEeCCHHHHHHHHhC
Confidence 334433444444444456789999999999887654
No 106
>PRK11587 putative phosphatase; Provisional
Probab=96.15 E-value=0.031 Score=59.87 Aligned_cols=112 Identities=14% Similarity=0.132 Sum_probs=72.3
Q ss_pred CCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCcccccccccceeecchhhhcCCHHHHHHHhccccEEeecC
Q 001616 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (1044)
Q Consensus 665 ~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~ar~s 744 (1044)
++.||+.+.++.|+++|+++.++|+.....+..+-+..|+.. ...++.+.+. .+..
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~------~~~i~~~~~~------------------~~~K 138 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPA------PEVFVTAERV------------------KRGK 138 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCC------ccEEEEHHHh------------------cCCC
Confidence 468999999999999999999999988777766666677632 1123333222 1122
Q ss_pred hhhHHHHHHHHHhc---CCEEEEEcCCcCCHHHHhhCCcc-eeeCCCchHHHhhccCEEEc
Q 001616 745 PFDKLLMVQCLKKK---GHVVAVTGDGTNDAPALKEADVG-LSMGIQGTEVAKESSDIVIL 801 (1044)
Q Consensus 745 P~~K~~lV~~lq~~---g~vVa~~GDG~NDapaLk~AdVG-iamg~~gt~vAk~aaDivl~ 801 (1044)
|. -.-+...+++. .+.+.|+||..+|..|=+.|++- +++...........+|+++.
T Consensus 139 P~-p~~~~~~~~~~g~~p~~~l~igDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~ 198 (218)
T PRK11587 139 PE-PDAYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIAVNAPADTPRLDEVDLVLH 198 (218)
T ss_pred CC-cHHHHHHHHHcCCCcccEEEEecchhhhHHHHHCCCEEEEECCCCchhhhccCCEEec
Confidence 32 22233333333 46689999999999999999984 44431112223345777765
No 107
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=96.14 E-value=0.014 Score=63.13 Aligned_cols=90 Identities=23% Similarity=0.244 Sum_probs=63.5
Q ss_pred CCchhHHHHHHHHHhcCCEEEEEcCC----CHHHHHHHHHHcCCcccccccccceeecchhhhcCCHHHHHHHhccccEE
Q 001616 665 PCRPGVQKAVEACQSAGVEIKMITGD----NVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVM 740 (1044)
Q Consensus 665 ~lR~~v~~aI~~l~~aGI~v~mlTGD----~~~tA~aIA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~ 740 (1044)
.+.|++++.++.+++.|+++.++||. ...|+..+.+..|+...+. ...++.|...
T Consensus 114 ~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~---f~vil~gd~~------------------ 172 (237)
T PRK11009 114 IPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNM---NPVIFAGDKP------------------ 172 (237)
T ss_pred cchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccc---eeEEEcCCCC------------------
Confidence 46788999999999999999999995 4679999999999942110 1222222210
Q ss_pred eecChhhHHHHHHHHHhcCCEEEEEcCCcCCHHHHhhCCcce
Q 001616 741 ARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGL 782 (1044)
Q Consensus 741 ar~sP~~K~~lV~~lq~~g~vVa~~GDG~NDapaLk~AdVGi 782 (1044)
.-.+|.. .+++.| .+.++||..+|..+-++|++-.
T Consensus 173 ---~K~~K~~---~l~~~~-i~I~IGDs~~Di~aA~~AGi~~ 207 (237)
T PRK11009 173 ---GQYTKTQ---WLKKKN-IRIFYGDSDNDITAAREAGARG 207 (237)
T ss_pred ---CCCCHHH---HHHhcC-CeEEEcCCHHHHHHHHHcCCcE
Confidence 0134544 444555 4788999999999999998753
No 108
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=96.07 E-value=0.015 Score=62.90 Aligned_cols=89 Identities=22% Similarity=0.230 Sum_probs=63.5
Q ss_pred CCchhHHHHHHHHHhcCCEEEEEcCC----CHHHHHHHHHHcCCcccccccccceeecchhhhcCCHHHHHHHhccccEE
Q 001616 665 PCRPGVQKAVEACQSAGVEIKMITGD----NVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVM 740 (1044)
Q Consensus 665 ~lR~~v~~aI~~l~~aGI~v~mlTGD----~~~tA~aIA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~ 740 (1044)
.+.+++++.++.++++|+++.++|+- ...++..+.+.+|+... ...++.|+....
T Consensus 114 ~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~-----f~~i~~~d~~~~---------------- 172 (237)
T TIGR01672 114 IPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAM-----NPVIFAGDKPGQ---------------- 172 (237)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchh-----eeEEECCCCCCC----------------
Confidence 34555999999999999999999997 77799999999999642 123333322210
Q ss_pred eecChhhHHHHHHHHHhcCCEEEEEcCCcCCHHHHhhCCcc
Q 001616 741 ARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVG 781 (1044)
Q Consensus 741 ar~sP~~K~~lV~~lq~~g~vVa~~GDG~NDapaLk~AdVG 781 (1044)
-.| +|. ..+++.| ++.|+||..||..+-++|++-
T Consensus 173 --~Kp-~~~---~~l~~~~-i~i~vGDs~~DI~aAk~AGi~ 206 (237)
T TIGR01672 173 --YQY-TKT---QWIQDKN-IRIHYGDSDNDITAAKEAGAR 206 (237)
T ss_pred --CCC-CHH---HHHHhCC-CeEEEeCCHHHHHHHHHCCCC
Confidence 112 233 3455555 478999999999999999764
No 109
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=95.99 E-value=0.037 Score=60.54 Aligned_cols=45 Identities=29% Similarity=0.407 Sum_probs=34.8
Q ss_pred hhHHHHHHHHHhc-C---CEEEEEcCCcCCHHHHhhCCcceeeCCCchHH
Q 001616 746 FDKLLMVQCLKKK-G---HVVAVTGDGTNDAPALKEADVGLSMGIQGTEV 791 (1044)
Q Consensus 746 ~~K~~lV~~lq~~-g---~vVa~~GDG~NDapaLk~AdVGiamg~~gt~v 791 (1044)
..|..-|+.|+++ | +.|.++||+.||.+||..++-||.+| ++.+.
T Consensus 164 a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL~~~~~~vvV~-Na~~e 212 (247)
T PF05116_consen 164 ASKGAALRYLMERWGIPPEQVLVAGDSGNDLEMLEGGDHGVVVG-NAQPE 212 (247)
T ss_dssp -SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHHCCSSEEEE-T-TS-HH
T ss_pred CCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHHcCcCCEEEEc-CCCHH
Confidence 4799999999876 2 34667899999999999999999999 45443
No 110
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=95.97 E-value=0.052 Score=56.32 Aligned_cols=144 Identities=21% Similarity=0.288 Sum_probs=90.8
Q ss_pred CchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCccccccc-----ccceeecchh---------hhcCCHHHHH
Q 001616 666 CRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQV-----EKGEVVEGVE---------FRNYTDEERI 731 (1044)
Q Consensus 666 lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~~~~~~-----~~~~vi~g~~---------~~~~~~~~~~ 731 (1044)
+-||+.++.+.+++. ...+++|---.+-+.++|..+|+...+..- +..-+-+++. ...++.+|+.
T Consensus 84 lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR~E~L~~~~~~~~~~geelf 162 (315)
T COG4030 84 LVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEEREELLSIIDVIASLSGEELF 162 (315)
T ss_pred cCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCCCccccccccccCccccCChHHHHHHHHhcCccccccHHHHH
Confidence 469999999999876 456667777888899999999995432110 0011111111 0011222222
Q ss_pred HHhccccEEeecChhh---------------HHHHHHHHHhc---CCEEEEEcCCcCCHHHHhhCC-c-ceeeCCCchHH
Q 001616 732 QKVDKIRVMARSSPFD---------------KLLMVQCLKKK---GHVVAVTGDGTNDAPALKEAD-V-GLSMGIQGTEV 791 (1044)
Q Consensus 732 ~~~~~~~V~ar~sP~~---------------K~~lV~~lq~~---g~vVa~~GDG~NDapaLk~Ad-V-Giamg~~gt~v 791 (1044)
+.++. +|.|.+|.. |.++++.+-+. ....+++||.+.|..||+.+. - |+|+.-+|.+-
T Consensus 163 e~lDe--~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgrGglAvaFNGNeY 240 (315)
T COG4030 163 EKLDE--LFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGGLAVAFNGNEY 240 (315)
T ss_pred HHHHH--HHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhccCceEEEecCCcc
Confidence 22222 455555544 45555555443 334688999999999999884 2 36666689999
Q ss_pred HhhccCEEEccCChhHHHHHH
Q 001616 792 AKESSDIVILDDDFTSVATVL 812 (1044)
Q Consensus 792 Ak~aaDivl~dd~f~~I~~~i 812 (1044)
|-..||+.+...+..+...+|
T Consensus 241 al~eAdVAvisp~~~a~~pvi 261 (315)
T COG4030 241 ALKEADVAVISPTAMAEAPVI 261 (315)
T ss_pred cccccceEEeccchhhhhHHH
Confidence 999999998877776655554
No 111
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=95.91 E-value=0.019 Score=57.86 Aligned_cols=105 Identities=16% Similarity=0.140 Sum_probs=72.2
Q ss_pred CCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcC----Ccccccccc-cceeecchhhhcCCHHHHHHHhccccE
Q 001616 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECG----ILRLDQQVE-KGEVVEGVEFRNYTDEERIQKVDKIRV 739 (1044)
Q Consensus 665 ~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~G----I~~~~~~~~-~~~vi~g~~~~~~~~~~~~~~~~~~~V 739 (1044)
.++|+.++.++.|++.+|.++++|+--.--...+-...+ |..-+...+ ..+-.+|.-. .+
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~ih~dg~h~---------------i~ 137 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYIHIDGQHS---------------IK 137 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceEcCCCcee---------------ee
Confidence 478999999999999999999999887766666666554 221000000 0000111100 01
Q ss_pred EeecCh--hhHHHHHHHHHhcCCEEEEEcCCcCCHHHHhhCCcceee
Q 001616 740 MARSSP--FDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSM 784 (1044)
Q Consensus 740 ~ar~sP--~~K~~lV~~lq~~g~vVa~~GDG~NDapaLk~AdVGiam 784 (1044)
.-..+| .+|...|+.|++..+.+-++|||+.|..|-+.+|+=+|-
T Consensus 138 ~~~ds~fG~dK~~vI~~l~e~~e~~fy~GDsvsDlsaaklsDllFAK 184 (220)
T COG4359 138 YTDDSQFGHDKSSVIHELSEPNESIFYCGDSVSDLSAAKLSDLLFAK 184 (220)
T ss_pred cCCccccCCCcchhHHHhhcCCceEEEecCCcccccHhhhhhhHhhH
Confidence 111122 489999999999999999999999999999999998864
No 112
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=95.81 E-value=0.055 Score=54.83 Aligned_cols=102 Identities=20% Similarity=0.237 Sum_probs=67.3
Q ss_pred cCCCchhHHHHHHHHHhcCCEEEEEcCCCHHHHH---HHHHHc---C--Ccccccccccceeec-chhhhcCCHHHHHHH
Q 001616 663 KDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAK---AIATEC---G--ILRLDQQVEKGEVVE-GVEFRNYTDEERIQK 733 (1044)
Q Consensus 663 ~D~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~---aIA~~~---G--I~~~~~~~~~~~vi~-g~~~~~~~~~~~~~~ 733 (1044)
+|.+.|+++++++.++++|+++.++||.....+. ....++ | +.. +.++.. |..+..+.
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~------g~li~~~g~~~~~~~------- 91 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPH------GPVLLSPDRLFAALH------- 91 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCC------ceEEEcCCcchhhhh-------
Confidence 5788999999999999999999999999998884 444442 2 221 111211 11111000
Q ss_pred hccccEEeecChh-hHHHHHHHHHh-----cCCEEEEEcCCcCCHHHHhhCCcc
Q 001616 734 VDKIRVMARSSPF-DKLLMVQCLKK-----KGHVVAVTGDGTNDAPALKEADVG 781 (1044)
Q Consensus 734 ~~~~~V~ar~sP~-~K~~lV~~lq~-----~g~vVa~~GDG~NDapaLk~AdVG 781 (1044)
+ .+. ...|+ .|...++.+++ ....++..||+.+|+.+.++++|-
T Consensus 92 --~-e~i-~~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~ 141 (157)
T smart00775 92 --R-EVI-SKKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIP 141 (157)
T ss_pred --c-ccc-cCCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCC
Confidence 0 122 22344 38888887777 356788899999999998877553
No 113
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=95.61 E-value=0.019 Score=61.77 Aligned_cols=112 Identities=23% Similarity=0.355 Sum_probs=72.9
Q ss_pred CCchhHHHHHHHH--HhcCCEEEEEcCCCHHHHHHHHHHcCCcccccccccceeecchhhhcCCHHHHHHHhc-cccEEe
Q 001616 665 PCRPGVQKAVEAC--QSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVD-KIRVMA 741 (1044)
Q Consensus 665 ~lR~~v~~aI~~l--~~aGI~v~mlTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~-~~~V~a 741 (1044)
|+.|+.+++++.| ++.|+.+.++|.-|..--..|=+.-|+...- ..+.+.+..-+-+. ...+.| +..-+.
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f-----~~I~TNpa~~~~~G--~l~v~pyh~h~C~ 143 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCF-----SEIFTNPACFDADG--RLRVRPYHSHGCS 143 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCcccc-----ceEEeCCceecCCc--eEEEeCccCCCCC
Confidence 6779999999999 5689999999999999999999999986421 11222211100000 000000 001244
Q ss_pred ecCh-hhHHHHHHHHHhc----C---CEEEEEcCCcCC-HHHH--hhCCccee
Q 001616 742 RSSP-FDKLLMVQCLKKK----G---HVVAVTGDGTND-APAL--KEADVGLS 783 (1044)
Q Consensus 742 r~sP-~~K~~lV~~lq~~----g---~vVa~~GDG~ND-apaL--k~AdVGia 783 (1044)
+|.| .=|..+++.+++. | ..|..+|||.|| +|++ +.+|+-++
T Consensus 144 ~C~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L~~~D~v~~ 196 (234)
T PF06888_consen 144 LCPPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALRLRPRDVVFP 196 (234)
T ss_pred cCCCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccccCCCCEEec
Confidence 6655 4799999888775 4 689999999999 4664 35665543
No 114
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=95.56 E-value=0.043 Score=57.69 Aligned_cols=93 Identities=14% Similarity=0.156 Sum_probs=65.4
Q ss_pred CCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCcccccccccceeecchhhhcCCHHHHHHHhccccEEeecC
Q 001616 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (1044)
Q Consensus 665 ~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~ar~s 744 (1044)
++.||+.++++.|+++|+++.++|+-+...+..+.+.+|+... ...++.+.+. .+..
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~-----fd~i~~s~~~------------------~~~K 148 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDP-----FDAVLSADAV------------------RAYK 148 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhh-----hheeEehhhc------------------CCCC
Confidence 4789999999999999999999999999999999999998532 1123322221 1223
Q ss_pred hhhHHHHHHHHHhc---CCEEEEEcCCcCCHHHHhhCCcc
Q 001616 745 PFDKLLMVQCLKKK---GHVVAVTGDGTNDAPALKEADVG 781 (1044)
Q Consensus 745 P~~K~~lV~~lq~~---g~vVa~~GDG~NDapaLk~AdVG 781 (1044)
|. ..-+-..+++. -+.+.++||+.+|..+-++|++-
T Consensus 149 P~-~~~~~~~~~~~~~~p~~~~~vgD~~~Di~~A~~~G~~ 187 (198)
T TIGR01428 149 PA-PQVYQLALEALGVPPDEVLFVASNPWDLGGAKKFGFK 187 (198)
T ss_pred CC-HHHHHHHHHHhCCChhhEEEEeCCHHHHHHHHHCCCc
Confidence 32 22223333333 35688999999999998888765
No 115
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=95.46 E-value=0.063 Score=64.37 Aligned_cols=122 Identities=19% Similarity=0.160 Sum_probs=81.7
Q ss_pred CCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCcccccccccceeecchhhhcCCHHHHHHHhccccEEeecC
Q 001616 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (1044)
Q Consensus 665 ~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~ar~s 744 (1044)
++.||+.+.++.|++.|+++.++|+-....+..+-+.+|+... ...++.+++.. ....
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~-----f~~i~~~d~v~-----------------~~~k 387 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQW-----VTETFSIEQIN-----------------SLNK 387 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhh-----cceeEecCCCC-----------------CCCC
Confidence 6789999999999999999999999999999999999998652 12233333221 1112
Q ss_pred hhhHHHHHHHHHhc-CCEEEEEcCCcCCHHHHhhCCcc-eeeCC-CchHHHhhccCEEEccCChhHHHHHHH
Q 001616 745 PFDKLLMVQCLKKK-GHVVAVTGDGTNDAPALKEADVG-LSMGI-QGTEVAKESSDIVILDDDFTSVATVLR 813 (1044)
Q Consensus 745 P~~K~~lV~~lq~~-g~vVa~~GDG~NDapaLk~AdVG-iamg~-~gt~vAk~aaDivl~dd~f~~I~~~i~ 813 (1044)
|+ .+...+++. -+.+.++||..+|..|-+.|++- |++.- .+.+.....+|+++. ++..+..++.
T Consensus 388 P~---~~~~al~~l~~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i~--~l~el~~~l~ 454 (459)
T PRK06698 388 SD---LVKSILNKYDIKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVID--DLLELKGILS 454 (459)
T ss_pred cH---HHHHHHHhcCcceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEeC--CHHHHHHHHH
Confidence 32 122222221 34589999999999999999973 33321 122222345888875 6777666553
No 116
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=95.43 E-value=0.092 Score=54.44 Aligned_cols=124 Identities=16% Similarity=0.100 Sum_probs=67.9
Q ss_pred CchhHHHHHHHHHhcCCEEEEEcCCCH---------------HHHHHHHHHcCCcccccccccceeecchhhhcCCHHHH
Q 001616 666 CRPGVQKAVEACQSAGVEIKMITGDNV---------------FTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEER 730 (1044)
Q Consensus 666 lR~~v~~aI~~l~~aGI~v~mlTGD~~---------------~tA~aIA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~ 730 (1044)
+.||+.++++.|++.|+++.++|..+. .....+-+..|+.-. .++.......
T Consensus 30 ~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~f~-------~i~~~~~~~~------ 96 (181)
T PRK08942 30 PIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGRLD-------GIYYCPHHPE------ 96 (181)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCccc-------eEEECCCCCC------
Confidence 579999999999999999999998762 111222334454210 0110000000
Q ss_pred HHHhccccEEeecC--hhhHHHHHHHHHhcCCEEEEEcCCcCCHHHHhhCCcceeeCC-CchH---HHhhcc--CEEEcc
Q 001616 731 IQKVDKIRVMARSS--PFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGI-QGTE---VAKESS--DIVILD 802 (1044)
Q Consensus 731 ~~~~~~~~V~ar~s--P~~K~~lV~~lq~~g~vVa~~GDG~NDapaLk~AdVGiamg~-~gt~---vAk~aa--Divl~d 802 (1044)
..+.+.. |+--....+.+.-..+.+.|+||..+|..+-+.|++. +++. .|.. .....+ |+++.
T Consensus 97 -------~~~~~~KP~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~-~i~v~~g~~~~~~~~~~~~~~~ii~- 167 (181)
T PRK08942 97 -------DGCDCRKPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVT-PVLVRTGKGVTTLAEGAAPGTWVLD- 167 (181)
T ss_pred -------CCCcCCCCCHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCe-EEEEcCCCCchhhhcccCCCceeec-
Confidence 0011112 2222333333333346789999999999999999974 3322 2211 122335 77764
Q ss_pred CChhHHHHHH
Q 001616 803 DDFTSVATVL 812 (1044)
Q Consensus 803 d~f~~I~~~i 812 (1044)
++..+..++
T Consensus 168 -~l~el~~~l 176 (181)
T PRK08942 168 -SLADLPQAL 176 (181)
T ss_pred -CHHHHHHHH
Confidence 566666554
No 117
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=95.41 E-value=0.027 Score=58.31 Aligned_cols=91 Identities=15% Similarity=0.307 Sum_probs=61.0
Q ss_pred CCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCcccccccccceeecchhhhcCCHHHHHHHhccccEEeecC
Q 001616 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (1044)
Q Consensus 665 ~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~ar~s 744 (1044)
++.||+.++++.|+++|+++.++|+.. .+..+.+.+|+... ...++.+.+. .+..
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~--~~~~~l~~~~l~~~-----f~~~~~~~~~------------------~~~k 141 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASK--NAPTVLEKLGLIDY-----FDAIVDPAEI------------------KKGK 141 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCc--cHHHHHHhcCcHhh-----CcEEEehhhc------------------CCCC
Confidence 578999999999999999999999743 24567777887542 1223333221 1223
Q ss_pred hhhHHHHHHHHHhcC---CEEEEEcCCcCCHHHHhhCCcc
Q 001616 745 PFDKLLMVQCLKKKG---HVVAVTGDGTNDAPALKEADVG 781 (1044)
Q Consensus 745 P~~K~~lV~~lq~~g---~vVa~~GDG~NDapaLk~AdVG 781 (1044)
| +...+-+.+++.| +.+.|+||..+|+.+-+.|++-
T Consensus 142 p-~p~~~~~~~~~~~~~~~~~v~vgD~~~di~aA~~aG~~ 180 (185)
T TIGR01990 142 P-DPEIFLAAAEGLGVSPSECIGIEDAQAGIEAIKAAGMF 180 (185)
T ss_pred C-ChHHHHHHHHHcCCCHHHeEEEecCHHHHHHHHHcCCE
Confidence 3 2223334444443 4588999999999999999874
No 118
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=95.33 E-value=0.1 Score=60.20 Aligned_cols=118 Identities=15% Similarity=0.174 Sum_probs=79.3
Q ss_pred CCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCcccccccccceeecchhhhcCCHHHHHHHhccccEEeecC
Q 001616 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (1044)
Q Consensus 665 ~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~ar~s 744 (1044)
++.||+.+.++.|+++|+++.++|+-....+..+-+..||... ...++.+.+.. +-.
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~y-----Fd~Iv~sddv~------------------~~K 272 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGF-----FSVIVAAEDVY------------------RGK 272 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHH-----ceEEEecCcCC------------------CCC
Confidence 4679999999999999999999999999999999999998653 22333333321 122
Q ss_pred hh--hHHHHHHHHHhcCCEEEEEcCCcCCHHHHhhCCcceeeCCCc-hHHH-hhccCEEEccCChhHH
Q 001616 745 PF--DKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQG-TEVA-KESSDIVILDDDFTSV 808 (1044)
Q Consensus 745 P~--~K~~lV~~lq~~g~vVa~~GDG~NDapaLk~AdVGiamg~~g-t~vA-k~aaDivl~dd~f~~I 808 (1044)
|. -=...++.+.-..+.+.|+||..+|+.|-+.|++-. ++..+ .... ...+|+++. ++..+
T Consensus 273 P~Peifl~A~~~lgl~Peecl~IGDS~~DIeAAk~AGm~~-IgV~~~~~~~~l~~Ad~iI~--s~~EL 337 (381)
T PLN02575 273 PDPEMFIYAAQLLNFIPERCIVFGNSNQTVEAAHDARMKC-VAVASKHPIYELGAADLVVR--RLDEL 337 (381)
T ss_pred CCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEE-EEECCCCChhHhcCCCEEEC--CHHHH
Confidence 32 212233333333567899999999999999999853 33222 2222 234788765 55553
No 119
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=95.22 E-value=0.061 Score=55.37 Aligned_cols=92 Identities=23% Similarity=0.239 Sum_probs=61.3
Q ss_pred CCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCcccccccccceeecchhhhcCCHHHHHHHhccccEEeecC
Q 001616 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (1044)
Q Consensus 665 ~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~ar~s 744 (1044)
++.||+.++++.|+++|+++.++|+-.... ..+..++|+... ...++.+.+. ....
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~-----f~~i~~~~~~------------------~~~K 140 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDL-----FDVVIFSGDV------------------GRGK 140 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHH-----CCEEEEcCCC------------------CCCC
Confidence 578999999999999999999999988877 555556888642 1223322221 1122
Q ss_pred h--hhHHHHHHHHHhcCCEEEEEcCCcCCHHHHhhCCc
Q 001616 745 P--FDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADV 780 (1044)
Q Consensus 745 P--~~K~~lV~~lq~~g~vVa~~GDG~NDapaLk~AdV 780 (1044)
| +-=..+.+.+.-....+.++||...|..+-++|++
T Consensus 141 P~~~~~~~~~~~~~~~~~~~~~vgD~~~di~aA~~~G~ 178 (183)
T TIGR01509 141 PDPDIYLLALKKLGLKPEECLFVDDSPAGIEAAKAAGM 178 (183)
T ss_pred CCHHHHHHHHHHcCCCcceEEEEcCCHHHHHHHHHcCC
Confidence 2 22222333333234668899999999998888876
No 120
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=95.14 E-value=0.054 Score=57.88 Aligned_cols=93 Identities=17% Similarity=0.227 Sum_probs=66.1
Q ss_pred CCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCcccccccccceeecchhhhcCCHHHHHHHhccccEEeecC
Q 001616 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (1044)
Q Consensus 665 ~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~ar~s 744 (1044)
++.||+.++++.|+++|+++.++|+-+...+...-+.+|+... ...++.+.+. .+..
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~-----f~~i~~~~~~------------------~~~K 150 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDF-----FDAVITSEEE------------------GVEK 150 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHh-----ccEEEEeccC------------------CCCC
Confidence 4789999999999999999999999988888888888888642 1123322221 1223
Q ss_pred hhhHHHHHHHHHhc---CCEEEEEcCCc-CCHHHHhhCCcc
Q 001616 745 PFDKLLMVQCLKKK---GHVVAVTGDGT-NDAPALKEADVG 781 (1044)
Q Consensus 745 P~~K~~lV~~lq~~---g~vVa~~GDG~-NDapaLk~AdVG 781 (1044)
|.. ..+-..+++. ...+.++||.. +|..+-++|++-
T Consensus 151 P~~-~~~~~~~~~~~~~~~~~~~igDs~~~di~~A~~aG~~ 190 (221)
T TIGR02253 151 PHP-KIFYAALKRLGVKPEEAVMVGDRLDKDIKGAKNLGMK 190 (221)
T ss_pred CCH-HHHHHHHHHcCCChhhEEEECCChHHHHHHHHHCCCE
Confidence 322 2233444444 35689999998 999999999874
No 121
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=94.96 E-value=0.064 Score=60.42 Aligned_cols=108 Identities=15% Similarity=0.020 Sum_probs=73.7
Q ss_pred ccCCCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCcccccccccceeecchhhhcCCHHHHHHHhccccEEe
Q 001616 662 IKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMA 741 (1044)
Q Consensus 662 i~D~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~a 741 (1044)
..+++.|++.++++.|++.|+++.++||....++..+.+.+|+.... .. .+.|.+- ... .+... ---
T Consensus 184 ~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~----f~-~i~~~~~----~~~---~~~~~-~~~ 250 (300)
T PHA02530 184 KEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIW----FD-DLIGRPP----DMH---FQREQ-GDK 250 (300)
T ss_pred ccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCc----hh-hhhCCcc----hhh---hcccC-CCC
Confidence 56889999999999999999999999999999999999999886310 00 1111110 000 00000 002
Q ss_pred ecChhhHHHHHHHHHh-cCCEEEEEcCCcCCHHHHhhCCcce
Q 001616 742 RSSPFDKLLMVQCLKK-KGHVVAVTGDGTNDAPALKEADVGL 782 (1044)
Q Consensus 742 r~sP~~K~~lV~~lq~-~g~vVa~~GDG~NDapaLk~AdVGi 782 (1044)
+-.|+-+...++.+-. .-..+.|+||..+|+.+-+.|++-.
T Consensus 251 kp~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~ 292 (300)
T PHA02530 251 RPDDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLEC 292 (300)
T ss_pred CCcHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeE
Confidence 3445566666655433 2367899999999999999998764
No 122
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=94.85 E-value=0.13 Score=50.18 Aligned_cols=92 Identities=17% Similarity=0.109 Sum_probs=61.9
Q ss_pred CCchhHHHHHHHHHhcCCEEEEEcCCC--------HHHHHHHHHHcCCcccccccccceeecchhhhcCCHHHHHHHhcc
Q 001616 665 PCRPGVQKAVEACQSAGVEIKMITGDN--------VFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDK 736 (1044)
Q Consensus 665 ~lR~~v~~aI~~l~~aGI~v~mlTGD~--------~~tA~aIA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~ 736 (1044)
++.|++.++++.|+++|+++.++|+.. .....++.+.+|+... .....+ .
T Consensus 25 ~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~------~~~~~~-~--------------- 82 (132)
T TIGR01662 25 ILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPID------VLYACP-H--------------- 82 (132)
T ss_pred eeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEE------EEEECC-C---------------
Confidence 578999999999999999999999998 7778888888887531 111111 0
Q ss_pred ccEEeecChhhHHHHHHHHH-hcCCEEEEEcC-CcCCHHHHhhCCcc
Q 001616 737 IRVMARSSPFDKLLMVQCLK-KKGHVVAVTGD-GTNDAPALKEADVG 781 (1044)
Q Consensus 737 ~~V~ar~sP~~K~~lV~~lq-~~g~vVa~~GD-G~NDapaLk~AdVG 781 (1044)
..+-.|+-=..+.+.++ -..+.+.|+|| -.+|..+-+.|++-
T Consensus 83 ---~~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~ 126 (132)
T TIGR01662 83 ---CRKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGLA 126 (132)
T ss_pred ---CCCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCCe
Confidence 00111221123333331 23466899999 58999998888653
No 123
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=94.81 E-value=0.1 Score=53.70 Aligned_cols=109 Identities=13% Similarity=0.038 Sum_probs=72.7
Q ss_pred eEEEEEecccCCCchhHHHHHHHHHhcCCEEEEEcCC-CHHHHHHHHHHcCCccccccc----ccceeecchhhhcCCHH
Q 001616 654 LTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGD-NVFTAKAIATECGILRLDQQV----EKGEVVEGVEFRNYTDE 728 (1044)
Q Consensus 654 l~llG~vgi~D~lR~~v~~aI~~l~~aGI~v~mlTGD-~~~tA~aIA~~~GI~~~~~~~----~~~~vi~g~~~~~~~~~ 728 (1044)
.......+-+-+++||+.+.++.|+++|+++.++|+- ....+..+-..+|+....... ....+
T Consensus 34 ~~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~~~~~~~Fd~i------------ 101 (174)
T TIGR01685 34 SIIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGKTVPMHSLFDDR------------ 101 (174)
T ss_pred CeEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCCcccHHHhceee------------
Confidence 3455666667788999999999999999999999965 899999999999985211000 00111
Q ss_pred HHHHHhccccEEeecChhhH--HHHHHHHHhc------CCEEEEEcCCcCCHHHHhhCCcceee
Q 001616 729 ERIQKVDKIRVMARSSPFDK--LLMVQCLKKK------GHVVAVTGDGTNDAPALKEADVGLSM 784 (1044)
Q Consensus 729 ~~~~~~~~~~V~ar~sP~~K--~~lV~~lq~~------g~vVa~~GDG~NDapaLk~AdVGiam 784 (1044)
+.++..+..| ..+.+.+.+. -+.+.|+||...|+.+-++|++-...
T Consensus 102 ----------v~~~~~~~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~ 155 (174)
T TIGR01685 102 ----------IEIYKPNKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCY 155 (174)
T ss_pred ----------eeccCCchHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEE
Confidence 1121111112 2234444332 25689999999999999999886543
No 124
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=94.76 E-value=0.046 Score=55.33 Aligned_cols=95 Identities=17% Similarity=0.228 Sum_probs=66.7
Q ss_pred CCCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCcccccccccceeecchhhhcCCHHHHHHHhccccEEeec
Q 001616 664 DPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARS 743 (1044)
Q Consensus 664 D~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~ar~ 743 (1044)
.++.||+.+.++.|++.|++++++|+-.........+..|+... ...++.+.+.. ..
T Consensus 76 ~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~-----f~~i~~~~~~~------------------~~ 132 (176)
T PF13419_consen 76 LQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDY-----FDEIISSDDVG------------------SR 132 (176)
T ss_dssp EEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGG-----CSEEEEGGGSS------------------SS
T ss_pred cchhhhhhhhhhhcccccceeEEeecCCcccccccccccccccc-----cccccccchhh------------------hh
Confidence 45789999999999999999999999999999999999998732 12233222221 11
Q ss_pred Chh--hHHHHHHHHHhcCCEEEEEcCCcCCHHHHhhCCcc
Q 001616 744 SPF--DKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVG 781 (1044)
Q Consensus 744 sP~--~K~~lV~~lq~~g~vVa~~GDG~NDapaLk~AdVG 781 (1044)
.|. -=..+++.+.-..+.+.++||+..|..+-++|++-
T Consensus 133 Kp~~~~~~~~~~~~~~~p~~~~~vgD~~~d~~~A~~~G~~ 172 (176)
T PF13419_consen 133 KPDPDAYRRALEKLGIPPEEILFVGDSPSDVEAAKEAGIK 172 (176)
T ss_dssp TTSHHHHHHHHHHHTSSGGGEEEEESSHHHHHHHHHTTSE
T ss_pred hhHHHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHcCCe
Confidence 222 11223333322346689999999999999988764
No 125
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=94.76 E-value=0.057 Score=55.83 Aligned_cols=92 Identities=14% Similarity=0.207 Sum_probs=61.6
Q ss_pred CCCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCcccccccccceeecchhhhcCCHHHHHHHhccccEEeec
Q 001616 664 DPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARS 743 (1044)
Q Consensus 664 D~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~ar~ 743 (1044)
-++.||+.++++.|++.|+++.++|+- ..+..+-+.+|+... ...++.+.+. .+.
T Consensus 87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~-----f~~v~~~~~~------------------~~~ 141 (185)
T TIGR02009 87 AEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDY-----FDAIVDADEV------------------KEG 141 (185)
T ss_pred CCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHH-----CCEeeehhhC------------------CCC
Confidence 367899999999999999999999987 567777788888542 1122222111 122
Q ss_pred ChhhHHHHHHHHHhc---CCEEEEEcCCcCCHHHHhhCCcc
Q 001616 744 SPFDKLLMVQCLKKK---GHVVAVTGDGTNDAPALKEADVG 781 (1044)
Q Consensus 744 sP~~K~~lV~~lq~~---g~vVa~~GDG~NDapaLk~AdVG 781 (1044)
.|... -+-+.+++. .+.+.++||+.+|..+-+.|++-
T Consensus 142 kp~~~-~~~~~~~~~~~~~~~~v~IgD~~~di~aA~~~G~~ 181 (185)
T TIGR02009 142 KPHPE-TFLLAAELLGVSPNECVVFEDALAGVQAARAAGMF 181 (185)
T ss_pred CCChH-HHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCe
Confidence 33221 122333333 34578999999999999998774
No 126
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=94.75 E-value=0.096 Score=55.93 Aligned_cols=118 Identities=13% Similarity=0.148 Sum_probs=74.7
Q ss_pred CCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCcccccccccceeecchhhhcCCHHHHHHHhccccEEeecC
Q 001616 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (1044)
Q Consensus 665 ~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~ar~s 744 (1044)
++.||+.+.++.|++. +++.++|+-....+..+.++.|+... ...++.+.+. .+..
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~-----fd~i~~~~~~------------------~~~K 152 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPF-----FDDIFVSEDA------------------GIQK 152 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhh-----cCEEEEcCcc------------------CCCC
Confidence 5789999999999999 99999999999999999999998652 1122222111 1112
Q ss_pred hhhHHHHHHHHHhc----CCEEEEEcCCc-CCHHHHhhCCcc---eeeCCCchHHHhhccCEEEccCChhHHHH
Q 001616 745 PFDKLLMVQCLKKK----GHVVAVTGDGT-NDAPALKEADVG---LSMGIQGTEVAKESSDIVILDDDFTSVAT 810 (1044)
Q Consensus 745 P~~K~~lV~~lq~~----g~vVa~~GDG~-NDapaLk~AdVG---iamg~~gt~vAk~aaDivl~dd~f~~I~~ 810 (1044)
|... .+-+.+++. -+.+.++||.. +|..+=+.+++- +..|. ..+.....+|.++. +++.+..
T Consensus 153 P~~~-~~~~~~~~~~~~~~~~~v~igD~~~~di~~A~~~G~~~i~~~~~~-~~~~~~~~~~~~~~--~~~el~~ 222 (224)
T TIGR02254 153 PDKE-IFNYALERMPKFSKEEVLMIGDSLTADIKGGQNAGLDTCWMNPDM-HPNPDDIIPTYEIR--SLEELYE 222 (224)
T ss_pred CCHH-HHHHHHHHhcCCCchheEEECCCcHHHHHHHHHCCCcEEEECCCC-CCCCCCCCCceEEC--CHHHHHh
Confidence 3221 222333333 34589999998 899999999863 32221 12122235666664 5555543
No 127
>PLN02940 riboflavin kinase
Probab=94.46 E-value=0.12 Score=60.19 Aligned_cols=94 Identities=18% Similarity=0.217 Sum_probs=65.3
Q ss_pred CCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHH-HcCCcccccccccceeecchhhhcCCHHHHHHHhccccEEeec
Q 001616 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIAT-ECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARS 743 (1044)
Q Consensus 665 ~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~-~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~ar~ 743 (1044)
++.||+.+.++.|++.|+++.++|+-....+...-+ ..|+... ...++.+++. .+.
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~-----Fd~ii~~d~v------------------~~~ 149 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKES-----FSVIVGGDEV------------------EKG 149 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhh-----CCEEEehhhc------------------CCC
Confidence 467999999999999999999999998888876655 5777542 2233333321 122
Q ss_pred ChhhHHHHHHHHHhc---CCEEEEEcCCcCCHHHHhhCCcce
Q 001616 744 SPFDKLLMVQCLKKK---GHVVAVTGDGTNDAPALKEADVGL 782 (1044)
Q Consensus 744 sP~~K~~lV~~lq~~---g~vVa~~GDG~NDapaLk~AdVGi 782 (1044)
.| +...+.+.+++. .+.+.++||+.+|..+-+.|++..
T Consensus 150 KP-~p~~~~~a~~~lgv~p~~~l~VGDs~~Di~aA~~aGi~~ 190 (382)
T PLN02940 150 KP-SPDIFLEAAKRLNVEPSNCLVIEDSLPGVMAGKAAGMEV 190 (382)
T ss_pred CC-CHHHHHHHHHHcCCChhHEEEEeCCHHHHHHHHHcCCEE
Confidence 33 222233344443 456899999999999999999863
No 128
>PRK09449 dUMP phosphatase; Provisional
Probab=94.41 E-value=0.19 Score=53.87 Aligned_cols=121 Identities=17% Similarity=0.202 Sum_probs=77.1
Q ss_pred CCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCcccccccccceeecchhhhcCCHHHHHHHhccccEEeecC
Q 001616 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (1044)
Q Consensus 665 ~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~ar~s 744 (1044)
++.||+.++++.|+ +|+++.++|......+...-+..|+... ...++.+.+. ....
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~-----fd~v~~~~~~------------------~~~K 150 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDY-----FDLLVISEQV------------------GVAK 150 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHH-----cCEEEEECcc------------------CCCC
Confidence 46899999999999 6899999999988888888888888542 1122222211 1123
Q ss_pred hhhHHHHHHHHHhcC----CEEEEEcCCc-CCHHHHhhCCcce-eeCCCchH-HHhhccCEEEccCChhHHHHHH
Q 001616 745 PFDKLLMVQCLKKKG----HVVAVTGDGT-NDAPALKEADVGL-SMGIQGTE-VAKESSDIVILDDDFTSVATVL 812 (1044)
Q Consensus 745 P~~K~~lV~~lq~~g----~vVa~~GDG~-NDapaLk~AdVGi-amg~~gt~-vAk~aaDivl~dd~f~~I~~~i 812 (1044)
| +..-+-..+++.| +.+.++||.. +|..+=+.|++-. .....+.. .....+|+++. ++..+..++
T Consensus 151 P-~p~~~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i~--~~~el~~~l 222 (224)
T PRK09449 151 P-DVAIFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQVS--SLSELEQLL 222 (224)
T ss_pred C-CHHHHHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEEC--CHHHHHHHH
Confidence 3 2223334444443 4689999998 7999999999853 33211211 11224788775 577766554
No 129
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=94.36 E-value=0.16 Score=56.87 Aligned_cols=116 Identities=19% Similarity=0.157 Sum_probs=71.0
Q ss_pred CCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCcccccccccceeecchhhhcCCHHHHHHHhccccEEeecC
Q 001616 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (1044)
Q Consensus 665 ~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~ar~s 744 (1044)
++.||+.+.++.|++.|+++.++|+-+......+-+..++..... .-.++.+.+. .+..
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~---~~~~v~~~~~------------------~~~K 202 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQ---GLDVFAGDDV------------------PKKK 202 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccC---ceEEEecccc------------------CCCC
Confidence 578999999999999999999999988888877666553221100 0011122211 1122
Q ss_pred hh--hHHHHHHHHHhcCCEEEEEcCCcCCHHHHhhCCcceeeCCCchH--HHhhccCEEEc
Q 001616 745 PF--DKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTE--VAKESSDIVIL 801 (1044)
Q Consensus 745 P~--~K~~lV~~lq~~g~vVa~~GDG~NDapaLk~AdVGiamg~~gt~--vAk~aaDivl~ 801 (1044)
|. -=..+.+.+.-....+.|+||+.+|..|-++|++....-..|.. .....+|+++.
T Consensus 203 P~p~~~~~a~~~~~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi~ 263 (286)
T PLN02779 203 PDPDIYNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVFD 263 (286)
T ss_pred CCHHHHHHHHHHhCcChHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEEC
Confidence 22 11223333332345689999999999999999987554323321 11235788774
No 130
>PRK06769 hypothetical protein; Validated
Probab=93.99 E-value=0.16 Score=52.36 Aligned_cols=96 Identities=14% Similarity=-0.006 Sum_probs=56.0
Q ss_pred CchhHHHHHHHHHhcCCEEEEEcCCCHH--------HHHHHHHHcCCcccccccccceee-cchhhhcCCHHHHHHHhcc
Q 001616 666 CRPGVQKAVEACQSAGVEIKMITGDNVF--------TAKAIATECGILRLDQQVEKGEVV-EGVEFRNYTDEERIQKVDK 736 (1044)
Q Consensus 666 lR~~v~~aI~~l~~aGI~v~mlTGD~~~--------tA~aIA~~~GI~~~~~~~~~~~vi-~g~~~~~~~~~~~~~~~~~ 736 (1044)
+-||++++++.|++.|+++.++|+.... .+...-+..|+..-. .... .+++.
T Consensus 29 ~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~~-----~~~~~~~~~~-------------- 89 (173)
T PRK06769 29 LFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDIY-----LCPHKHGDGC-------------- 89 (173)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEEE-----ECcCCCCCCC--------------
Confidence 6799999999999999999999987631 122223344543200 0000 00000
Q ss_pred ccEEeecChh--hHHHHHHHHHhcCCEEEEEcCCcCCHHHHhhCCcceee
Q 001616 737 IRVMARSSPF--DKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSM 784 (1044)
Q Consensus 737 ~~V~ar~sP~--~K~~lV~~lq~~g~vVa~~GDG~NDapaLk~AdVGiam 784 (1044)
....|. -=..+.+.+.-.-+.+.|+||..+|..+=++|++-...
T Consensus 90 ----~~~KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i~ 135 (173)
T PRK06769 90 ----ECRKPSTGMLLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNATTIL 135 (173)
T ss_pred ----CCCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEE
Confidence 111221 11223333322235689999999999999999876543
No 131
>PLN02580 trehalose-phosphatase
Probab=93.95 E-value=0.53 Score=54.39 Aligned_cols=66 Identities=21% Similarity=0.262 Sum_probs=46.0
Q ss_pred ecChh---hHHHHHHHHHhc-C-----C-EEEEEcCCcCCHHHHhh-----CCcceeeCCCchHHHhhccCEEEccCChh
Q 001616 742 RSSPF---DKLLMVQCLKKK-G-----H-VVAVTGDGTNDAPALKE-----ADVGLSMGIQGTEVAKESSDIVILDDDFT 806 (1044)
Q Consensus 742 r~sP~---~K~~lV~~lq~~-g-----~-vVa~~GDG~NDapaLk~-----AdVGiamg~~gt~vAk~aaDivl~dd~f~ 806 (1044)
...|. +|..-|+.+.+. | . .+.++||+.||-.|++. +++||+|| +|.. .-.|++.|. +..
T Consensus 293 EVrP~~g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vg-n~~~--~t~A~y~L~--dp~ 367 (384)
T PLN02580 293 EVRPVIDWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVS-SVPK--ESNAFYSLR--DPS 367 (384)
T ss_pred EEecCCCCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEe-cCCC--CccceEEcC--CHH
Confidence 44553 899888887654 2 2 25899999999999996 68999998 4432 225678776 455
Q ss_pred HHHHHH
Q 001616 807 SVATVL 812 (1044)
Q Consensus 807 ~I~~~i 812 (1044)
.+...+
T Consensus 368 eV~~~L 373 (384)
T PLN02580 368 EVMEFL 373 (384)
T ss_pred HHHHHH
Confidence 555444
No 132
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=93.92 E-value=0.13 Score=55.38 Aligned_cols=94 Identities=11% Similarity=0.037 Sum_probs=65.5
Q ss_pred CCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCcccccccccceeecchhhhcCCHHHHHHHhccccEEeecC
Q 001616 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (1044)
Q Consensus 665 ~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~ar~s 744 (1044)
++.||+.+.++.|+++|+++.++|+-+...+...-+..|+... ...++.+.++ .+..
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~-----fd~iv~s~~~------------------~~~K 149 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAH-----LDLLLSTHTF------------------GYPK 149 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHH-----CCEEEEeeeC------------------CCCC
Confidence 5689999999999999999999999988888888788887642 1222222211 1122
Q ss_pred hhhHHHHHHHHHhc---CCEEEEEcCCcCCHHHHhhCCcce
Q 001616 745 PFDKLLMVQCLKKK---GHVVAVTGDGTNDAPALKEADVGL 782 (1044)
Q Consensus 745 P~~K~~lV~~lq~~---g~vVa~~GDG~NDapaLk~AdVGi 782 (1044)
|. -.-+.+.+++. .+.+.++||..+|..+=+.|++..
T Consensus 150 P~-p~~~~~~~~~~~~~p~~~l~igDs~~di~aA~~aG~~~ 189 (224)
T PRK14988 150 ED-QRLWQAVAEHTGLKAERTLFIDDSEPILDAAAQFGIRY 189 (224)
T ss_pred CC-HHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCeE
Confidence 31 11222333333 345899999999999999999963
No 133
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=93.79 E-value=0.2 Score=51.44 Aligned_cols=85 Identities=20% Similarity=0.229 Sum_probs=61.2
Q ss_pred CCCchhHHHHHHHHHhcCCEEEEEcCCC-HHHHHHHHHHcCCcccccccccceeecchhhhcCCHHHHHHHhccccEEee
Q 001616 664 DPCRPGVQKAVEACQSAGVEIKMITGDN-VFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMAR 742 (1044)
Q Consensus 664 D~lR~~v~~aI~~l~~aGI~v~mlTGD~-~~tA~aIA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~ar 742 (1044)
..+-|+++++++.|++.|+++.++|+-+ ...+..+++.+|+... ...
T Consensus 42 ~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~~~--------------------------------~~~ 89 (170)
T TIGR01668 42 NEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIPVL--------------------------------PHA 89 (170)
T ss_pred CCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCEEE--------------------------------cCC
Confidence 3578999999999999999999999988 6777888888886420 111
Q ss_pred cChhhHHHHHHHHHhc---CCEEEEEcCCc-CCHHHHhhCCcc
Q 001616 743 SSPFDKLLMVQCLKKK---GHVVAVTGDGT-NDAPALKEADVG 781 (1044)
Q Consensus 743 ~sP~~K~~lV~~lq~~---g~vVa~~GDG~-NDapaLk~AdVG 781 (1044)
..|.- ..+-..+++. .+.+.|+||.. .|..+=+.|++-
T Consensus 90 ~KP~p-~~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~ 131 (170)
T TIGR01668 90 VKPPG-CAFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSY 131 (170)
T ss_pred CCCCh-HHHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCe
Confidence 23321 1233334443 34589999998 699999998874
No 134
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=93.30 E-value=0.76 Score=47.98 Aligned_cols=38 Identities=11% Similarity=0.131 Sum_probs=32.8
Q ss_pred hhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCc
Q 001616 668 PGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGIL 705 (1044)
Q Consensus 668 ~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~ 705 (1044)
..+...+..++++|+.|+.+|.-....-...-+++|+.
T Consensus 26 ~pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 26 QPAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred CccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 34678899999999999999998888888888888876
No 135
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=92.87 E-value=0.97 Score=49.22 Aligned_cols=94 Identities=13% Similarity=0.162 Sum_probs=59.4
Q ss_pred EEecccCCCchhHHHHHHHHHhcCCEEEEEcCCCHHHHH--HHHHHcCCcccccccccceeecchhhhcCCHHHHHHHhc
Q 001616 658 GIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAK--AIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVD 735 (1044)
Q Consensus 658 G~vgi~D~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~--aIA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~ 735 (1044)
|.+.-.+.+-||++++++.|+++|+++.++|.-....+. ...+++|+..+. ...+++..+.
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~----~~~Ii~s~~~------------- 79 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADL----PEMIISSGEI------------- 79 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCccc----cceEEccHHH-------------
Confidence 444445678899999999999999999999995544433 456778886411 1122221111
Q ss_pred cccEEeecChhhHHHHHHHHHh---cCCEEEEEcCCcCCHHHHhhCC
Q 001616 736 KIRVMARSSPFDKLLMVQCLKK---KGHVVAVTGDGTNDAPALKEAD 779 (1044)
Q Consensus 736 ~~~V~ar~sP~~K~~lV~~lq~---~g~vVa~~GDG~NDapaLk~Ad 779 (1044)
...-+.+.+++ .+..+.++||+.+|...+..++
T Consensus 80 -----------~~~~l~~~~~~~~~~~~~~~~vGd~~~d~~~~~~~~ 115 (242)
T TIGR01459 80 -----------AVQMILESKKRFDIRNGIIYLLGHLENDIINLMQCY 115 (242)
T ss_pred -----------HHHHHHhhhhhccCCCceEEEeCCcccchhhhcCCC
Confidence 01122222333 2466899999999998886443
No 136
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=92.84 E-value=0.48 Score=52.19 Aligned_cols=87 Identities=16% Similarity=0.133 Sum_probs=59.3
Q ss_pred cCCCchhHHHHHHHHHhcCCEEEEEcCCCHHH---HHHHHHHcCCcccccccccceeecchhhhcCCHHHHHHHhccccE
Q 001616 663 KDPCRPGVQKAVEACQSAGVEIKMITGDNVFT---AKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRV 739 (1044)
Q Consensus 663 ~D~lR~~v~~aI~~l~~aGI~v~mlTGD~~~t---A~aIA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V 739 (1044)
..++-||+.+.++.+++.|+++.++|+..... +...-+..|+..... .. +
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~---d~------------------------l 168 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADE---EH------------------------L 168 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCc---ce------------------------E
Confidence 45577999999999999999999999976433 334556678753210 01 3
Q ss_pred EeecChhhHHHHHHHHHhcCCEEEEEcCCcCCHHHHh
Q 001616 740 MARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALK 776 (1044)
Q Consensus 740 ~ar~sP~~K~~lV~~lq~~g~vVa~~GDG~NDapaLk 776 (1044)
+.|-....|..-.+.+.+.-.+|+++||-.+|.....
T Consensus 169 llr~~~~~K~~rr~~I~~~y~Ivl~vGD~~~Df~~~~ 205 (266)
T TIGR01533 169 LLKKDKSSKESRRQKVQKDYEIVLLFGDNLLDFDDFF 205 (266)
T ss_pred EeCCCCCCcHHHHHHHHhcCCEEEEECCCHHHhhhhh
Confidence 3333223455555666565567999999999986543
No 137
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=92.79 E-value=0.32 Score=48.62 Aligned_cols=89 Identities=17% Similarity=0.282 Sum_probs=57.4
Q ss_pred CCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCcccccccccceeecchhhhcCCHHHHHHHhccccEEeecC
Q 001616 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (1044)
Q Consensus 665 ~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~ar~s 744 (1044)
+..+|+.+.++.|++.|+++.++|+-....+....+.. +... ...++...+ .. ..
T Consensus 64 ~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~-----f~~i~~~~~------------------~~-~K 118 (154)
T TIGR01549 64 AYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDY-----FDLILGSDE------------------FG-AK 118 (154)
T ss_pred eeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhc-----CcEEEecCC------------------CC-CC
Confidence 34589999999999999999999999999888877775 3321 111111100 11 12
Q ss_pred hhhHHHHHHHHHhcCC--EEEEEcCCcCCHHHHhhCC
Q 001616 745 PFDKLLMVQCLKKKGH--VVAVTGDGTNDAPALKEAD 779 (1044)
Q Consensus 745 P~~K~~lV~~lq~~g~--vVa~~GDG~NDapaLk~Ad 779 (1044)
| +...+.+.+++.|. .+.++||..+|..|-++|+
T Consensus 119 p-~~~~~~~~~~~~~~~~~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 119 P-EPEIFLAALESLGLPPEVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred c-CHHHHHHHHHHcCCCCCEEEEeCCHHHHHHHHHcc
Confidence 3 12223333333322 6899999999998877763
No 138
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=92.68 E-value=0.29 Score=51.53 Aligned_cols=91 Identities=18% Similarity=0.221 Sum_probs=59.0
Q ss_pred CCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCcccccccccceeecchhhhcCCHHHHHHHhccccEEeecC
Q 001616 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (1044)
Q Consensus 665 ~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~ar~s 744 (1044)
++-||+.++++.|+++|+++.++|+-... .....+.+|+... ...++.+.+. ....
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~-----fd~i~~s~~~------------------~~~K 160 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEY-----FDFVVTSYEV------------------GAEK 160 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHh-----cceEEeeccc------------------CCCC
Confidence 56799999999999999999999976543 4667777887432 1122221111 1112
Q ss_pred hhhHHHHHHHHHhc---CCEEEEEcCCc-CCHHHHhhCCc
Q 001616 745 PFDKLLMVQCLKKK---GHVVAVTGDGT-NDAPALKEADV 780 (1044)
Q Consensus 745 P~~K~~lV~~lq~~---g~vVa~~GDG~-NDapaLk~AdV 780 (1044)
|. ...+-+.+++. ...+.++||+. +|..+=++|++
T Consensus 161 P~-~~~~~~~~~~~~~~~~~~~~IgD~~~~Di~~A~~aG~ 199 (203)
T TIGR02252 161 PD-PKIFQEALERAGISPEEALHIGDSLRNDYQGARAAGW 199 (203)
T ss_pred CC-HHHHHHHHHHcCCChhHEEEECCCchHHHHHHHHcCC
Confidence 32 22333344444 35689999997 89988888765
No 139
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=92.52 E-value=0.29 Score=48.88 Aligned_cols=96 Identities=20% Similarity=0.230 Sum_probs=58.9
Q ss_pred CCchhHHHHHHHHHhcCCEEEEEcCCCH---------------HHHHHHHHHcCCcccccccccceeecchhhhcCCHHH
Q 001616 665 PCRPGVQKAVEACQSAGVEIKMITGDNV---------------FTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEE 729 (1044)
Q Consensus 665 ~lR~~v~~aI~~l~~aGI~v~mlTGD~~---------------~tA~aIA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~ 729 (1044)
++.||+.++++.|++.|+++.++|..+. ..+..+.+.+|+.... ..... ....
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~------~~~~~-~~~~----- 94 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDG------VLFCP-HHPA----- 94 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeE------EEECC-CCCC-----
Confidence 3689999999999999999999998762 3455667778875210 00000 0000
Q ss_pred HHHHhccccEEeecChhhHHHHHHHHHhcC---CEEEEEcCCcCCHHHHhhCCcc
Q 001616 730 RIQKVDKIRVMARSSPFDKLLMVQCLKKKG---HVVAVTGDGTNDAPALKEADVG 781 (1044)
Q Consensus 730 ~~~~~~~~~V~ar~sP~~K~~lV~~lq~~g---~vVa~~GDG~NDapaLk~AdVG 781 (1044)
.......|+ ...+-..+++.| +.+.++||...|..+-+.|++-
T Consensus 95 --------~~~~~~KP~-~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~ 140 (147)
T TIGR01656 95 --------DNCSCRKPK-PGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLA 140 (147)
T ss_pred --------CCCCCCCCC-HHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCC
Confidence 000001332 222333334433 5589999999999998888764
No 140
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=92.45 E-value=0.49 Score=47.48 Aligned_cols=107 Identities=16% Similarity=0.243 Sum_probs=76.0
Q ss_pred HHHHHhcccceeeeeeeecCchhhcccchHHHhhhhcccCeEEEEEecccCCCchhHHHHHHHHHhcCCEEEEEcCCCHH
Q 001616 614 IHGMAASSLRCIAFAYKQVSEEETAYNNDVKARQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVF 693 (1044)
Q Consensus 614 i~~~a~~glR~l~~A~k~l~~~~~~~~~~~~~~~~~~e~~l~llG~vgi~D~lR~~v~~aI~~l~~aGI~v~mlTGD~~~ 693 (1044)
.+.+..+|+|.+.+-. + =|+++.= ....-|++++-++.++++|+++.++|.-+..
T Consensus 20 ~~~L~~~Gikgvi~Dl---D--------------------NTLv~wd--~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~ 74 (175)
T COG2179 20 PDILKAHGIKGVILDL---D--------------------NTLVPWD--NPDATPELRAWLAELKEAGIKVVVVSNNKES 74 (175)
T ss_pred HHHHHHcCCcEEEEec---c--------------------Cceeccc--CCCCCHHHHHHHHHHHhcCCEEEEEeCCCHH
Confidence 4567788988887632 2 1232221 2345689999999999999999999999999
Q ss_pred HHHHHHHHcCCcccccccccceeecchhhhcCCHHHHHHHhccccEEeecChhhHHHHHHHHHhc---CCEEEEEcCCc-
Q 001616 694 TAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPFDKLLMVQCLKKK---GHVVAVTGDGT- 769 (1044)
Q Consensus 694 tA~aIA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~ar~sP~~K~~lV~~lq~~---g~vVa~~GDG~- 769 (1044)
.+...+..+|+.- +.--..|.-+ .+-+++++. -+.|+|+||-.
T Consensus 75 RV~~~~~~l~v~f--------------------------------i~~A~KP~~~-~fr~Al~~m~l~~~~vvmVGDqL~ 121 (175)
T COG2179 75 RVARAAEKLGVPF--------------------------------IYRAKKPFGR-AFRRALKEMNLPPEEVVMVGDQLF 121 (175)
T ss_pred HHHhhhhhcCCce--------------------------------eecccCccHH-HHHHHHHHcCCChhHEEEEcchhh
Confidence 9999999999864 2323344433 466777776 46789999975
Q ss_pred CCHHHHhhC
Q 001616 770 NDAPALKEA 778 (1044)
Q Consensus 770 NDapaLk~A 778 (1044)
-|+-+=+.|
T Consensus 122 TDVlggnr~ 130 (175)
T COG2179 122 TDVLGGNRA 130 (175)
T ss_pred hhhhccccc
Confidence 476654444
No 141
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=92.19 E-value=0.71 Score=59.21 Aligned_cols=50 Identities=10% Similarity=0.079 Sum_probs=37.0
Q ss_pred CeEEEEEecccCCCchhHHHHHHHH-HhcCCEEEEEcCCCHHHHHHHHHHc
Q 001616 653 GLTLLGIVGIKDPCRPGVQKAVEAC-QSAGVEIKMITGDNVFTAKAIATEC 702 (1044)
Q Consensus 653 ~l~llG~vgi~D~lR~~v~~aI~~l-~~aGI~v~mlTGD~~~tA~aIA~~~ 702 (1044)
|.|++-.....-.+-+++.++++.| ++.|+.|.++||....+....-..+
T Consensus 604 DGTLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~~ 654 (854)
T PLN02205 604 DGTLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSPC 654 (854)
T ss_pred CCcccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCCC
Confidence 3344433222335668999999996 7889999999999999998877543
No 142
>PLN02811 hydrolase
Probab=92.05 E-value=0.37 Score=51.64 Aligned_cols=95 Identities=20% Similarity=0.265 Sum_probs=57.9
Q ss_pred CCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHH-HHHHcCCcccccccccceeecch--hhhcCCHHHHHHHhccccEEe
Q 001616 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKA-IATECGILRLDQQVEKGEVVEGV--EFRNYTDEERIQKVDKIRVMA 741 (1044)
Q Consensus 665 ~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~a-IA~~~GI~~~~~~~~~~~vi~g~--~~~~~~~~~~~~~~~~~~V~a 741 (1044)
++.||+.+.++.|++.|+++.++||-....... ..+..|+... ...++.+. +. .
T Consensus 78 ~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~-----f~~i~~~~~~~~------------------~ 134 (220)
T PLN02811 78 DLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSL-----MHHVVTGDDPEV------------------K 134 (220)
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhh-----CCEEEECChhhc------------------c
Confidence 568999999999999999999999977654432 2222233221 11222222 11 1
Q ss_pred ecChhhHHHHHHHHHhc------CCEEEEEcCCcCCHHHHhhCCccee
Q 001616 742 RSSPFDKLLMVQCLKKK------GHVVAVTGDGTNDAPALKEADVGLS 783 (1044)
Q Consensus 742 r~sP~~K~~lV~~lq~~------g~vVa~~GDG~NDapaLk~AdVGia 783 (1044)
+..|.- ..+...+++. .+.+.|+||...|+.|-+.|++-..
T Consensus 135 ~~KP~p-~~~~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~aG~~~i 181 (220)
T PLN02811 135 QGKPAP-DIFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNAGMSVV 181 (220)
T ss_pred CCCCCc-HHHHHHHHHhCCCCCCccceEEEeccHhhHHHHHHCCCeEE
Confidence 112221 1222333333 3568999999999999999998543
No 143
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=91.99 E-value=0.63 Score=47.99 Aligned_cols=27 Identities=19% Similarity=0.281 Sum_probs=24.3
Q ss_pred CchhHHHHHHHHHhcCCEEEEEcCCCH
Q 001616 666 CRPGVQKAVEACQSAGVEIKMITGDNV 692 (1044)
Q Consensus 666 lR~~v~~aI~~l~~aGI~v~mlTGD~~ 692 (1044)
+.||+.++++.|+++|+++.++|.-+.
T Consensus 27 ~~pgv~e~L~~Lk~~G~~l~i~TN~~~ 53 (176)
T TIGR00213 27 FIDGVIDALRELKKMGYALVLVTNQSG 53 (176)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCcc
Confidence 569999999999999999999997653
No 144
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=91.73 E-value=0.42 Score=54.82 Aligned_cols=97 Identities=22% Similarity=0.168 Sum_probs=58.8
Q ss_pred CCchhHHHHHHHHHhcCCEEEEEcCC---------------CHHHHHHHHHHcCCcccccccccceeecchhhhcCCHHH
Q 001616 665 PCRPGVQKAVEACQSAGVEIKMITGD---------------NVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEE 729 (1044)
Q Consensus 665 ~lR~~v~~aI~~l~~aGI~v~mlTGD---------------~~~tA~aIA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~ 729 (1044)
++.||+.++++.|+++|+++.++|+- ....+..+.+..|+... ..++.. ... .+
T Consensus 30 ~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~fd------~i~i~~-~~~--sd-- 98 (354)
T PRK05446 30 AFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIKFD------EVLICP-HFP--ED-- 98 (354)
T ss_pred eECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCcee------eEEEeC-CcC--cc--
Confidence 57899999999999999999999982 13345556666676321 111110 000 00
Q ss_pred HHHHhccccEEeecChhhHHHHHHHH-Hhc---CCEEEEEcCCcCCHHHHhhCCccee
Q 001616 730 RIQKVDKIRVMARSSPFDKLLMVQCL-KKK---GHVVAVTGDGTNDAPALKEADVGLS 783 (1044)
Q Consensus 730 ~~~~~~~~~V~ar~sP~~K~~lV~~l-q~~---g~vVa~~GDG~NDapaLk~AdVGia 783 (1044)
...+| .|. -.++..+ ++. ...+.|+||+.+|..+-+.|++-..
T Consensus 99 --------~~~~r-KP~--p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~I 145 (354)
T PRK05446 99 --------NCSCR-KPK--TGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKGI 145 (354)
T ss_pred --------cCCCC-CCC--HHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeEE
Confidence 00111 232 2233332 322 3678999999999999998887643
No 145
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=91.57 E-value=0.17 Score=50.66 Aligned_cols=92 Identities=15% Similarity=0.027 Sum_probs=64.7
Q ss_pred CCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCcccccccccceeecchhhhcCCHHHHHHHhccccEEeecC
Q 001616 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (1044)
Q Consensus 665 ~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~ar~s 744 (1044)
++|||+.+.++.|+ .++++.++|.-+...+..+-+.+|+...- ...++.+++.. +..
T Consensus 45 ~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~~----f~~i~~~~d~~------------------~~K 101 (148)
T smart00577 45 KKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKYF----GYRRLFRDECV------------------FVK 101 (148)
T ss_pred EECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCCE----eeeEEECcccc------------------ccC
Confidence 57999999999999 57999999999999999999998874310 12233322221 112
Q ss_pred hhhHHHHHHHHHhc---CCEEEEEcCCcCCHHHHhhCCccee
Q 001616 745 PFDKLLMVQCLKKK---GHVVAVTGDGTNDAPALKEADVGLS 783 (1044)
Q Consensus 745 P~~K~~lV~~lq~~---g~vVa~~GDG~NDapaLk~AdVGia 783 (1044)
|. +.+.+++. -+.+.++||..+|..|-++|.|-|.
T Consensus 102 P~----~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~ 139 (148)
T smart00577 102 GK----YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPIK 139 (148)
T ss_pred Ce----EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEec
Confidence 32 44444443 4678999999999998877765553
No 146
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=91.03 E-value=0.63 Score=45.37 Aligned_cols=39 Identities=5% Similarity=0.075 Sum_probs=34.7
Q ss_pred CCchhHHHHHHHHHhcCCEEEEEcCC-CHHHHHHHHHHcC
Q 001616 665 PCRPGVQKAVEACQSAGVEIKMITGD-NVFTAKAIATECG 703 (1044)
Q Consensus 665 ~lR~~v~~aI~~l~~aGI~v~mlTGD-~~~tA~aIA~~~G 703 (1044)
++.||+.+.++.|+++|+++.++|+- ....+..+-+..|
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence 78999999999999999999999999 7777777767666
No 147
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=91.03 E-value=0.68 Score=61.09 Aligned_cols=134 Identities=15% Similarity=0.208 Sum_probs=84.5
Q ss_pred CchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCcccccccccceeecchhhhcCCHHHHHHHhccccEEeecCh
Q 001616 666 CRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSP 745 (1044)
Q Consensus 666 lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~ar~sP 745 (1044)
+-||+.+.++.|+++|+++.++|+-....+..+-+..|+.... ...++.+.+. .+..|
T Consensus 162 ~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~----Fd~iv~~~~~------------------~~~KP 219 (1057)
T PLN02919 162 GFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSM----FDAIVSADAF------------------ENLKP 219 (1057)
T ss_pred cCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhH----CCEEEECccc------------------ccCCC
Confidence 5699999999999999999999999999999888889985210 1223333322 12233
Q ss_pred hhH--HHHHHHHHhcCCEEEEEcCCcCCHHHHhhCCcc-eee--CCCchHHHhhccCEEEccCChhHHHHHHHHhHHHHH
Q 001616 746 FDK--LLMVQCLKKKGHVVAVTGDGTNDAPALKEADVG-LSM--GIQGTEVAKESSDIVILDDDFTSVATVLRWGRCVYT 820 (1044)
Q Consensus 746 ~~K--~~lV~~lq~~g~vVa~~GDG~NDapaLk~AdVG-iam--g~~gt~vAk~aaDivl~dd~f~~I~~~i~~GR~~~~ 820 (1044)
+.. ....+.+.-..+.+.++||..+|+.|-+.|++- |++ +....+.....+|+++.+-.--++..++.-|-..+.
T Consensus 220 ~Pe~~~~a~~~lgv~p~e~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi~~l~el~~~~~~~~~~~~~~ 299 (1057)
T PLN02919 220 APDIFLAAAKILGVPTSECVVIEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIRKDIGNISLSDILTGGSDATP 299 (1057)
T ss_pred CHHHHHHHHHHcCcCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECChHHCCHHHHHhcCCCCCC
Confidence 221 222233332345688999999999999999873 222 222233455678888864322234555555544444
Q ss_pred h
Q 001616 821 N 821 (1044)
Q Consensus 821 n 821 (1044)
|
T Consensus 300 ~ 300 (1057)
T PLN02919 300 N 300 (1057)
T ss_pred C
Confidence 4
No 148
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=90.89 E-value=1.2 Score=47.95 Aligned_cols=88 Identities=19% Similarity=0.198 Sum_probs=55.2
Q ss_pred cCCCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHH---HHcCCcccccccccceeecchhhhcCCHHHHHHHhccccE
Q 001616 663 KDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIA---TECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRV 739 (1044)
Q Consensus 663 ~D~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA---~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V 739 (1044)
+-|.-|++.++++.+++.|++|+++||.......++. ++.|+..- ..+.+-+.+-.
T Consensus 118 ~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~-----~~LiLR~~~d~---------------- 176 (229)
T TIGR01675 118 AAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGW-----KHLILRGLEDS---------------- 176 (229)
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCc-----CeeeecCCCCC----------------
Confidence 3478899999999999999999999999876533332 34565421 11222111000
Q ss_pred EeecChhhHHHHHHHHHhcCC-EEEEEcCCcCCH
Q 001616 740 MARSSPFDKLLMVQCLKKKGH-VVAVTGDGTNDA 772 (1044)
Q Consensus 740 ~ar~sP~~K~~lV~~lq~~g~-vVa~~GDG~NDa 772 (1044)
....-+-|...-+.+.+.|+ +++.+||-.+|.
T Consensus 177 -~~~~~~yKs~~R~~l~~~GYrIv~~iGDq~sDl 209 (229)
T TIGR01675 177 -NKTVVTYKSEVRKSLMEEGYRIWGNIGDQWSDL 209 (229)
T ss_pred -CchHhHHHHHHHHHHHhCCceEEEEECCChHHh
Confidence 00001127676667777765 568899998886
No 149
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=90.70 E-value=0.36 Score=52.66 Aligned_cols=68 Identities=19% Similarity=0.184 Sum_probs=49.7
Q ss_pred EeecChhhHHHHHHHHHhc----CCEEEEEcCCcCCHHHHhhC--------CcceeeCCCchHHHhhccCEEEccCChhH
Q 001616 740 MARSSPFDKLLMVQCLKKK----GHVVAVTGDGTNDAPALKEA--------DVGLSMGIQGTEVAKESSDIVILDDDFTS 807 (1044)
Q Consensus 740 ~ar~sP~~K~~lV~~lq~~----g~vVa~~GDG~NDapaLk~A--------dVGiamg~~gt~vAk~aaDivl~dd~f~~ 807 (1044)
-.+..+.+|...++.+.+. ...++++||+.||.+|++.+ ..|++|+ .|. .+..|++++. +...
T Consensus 160 e~~p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~-~g~--~~~~A~~~~~--~~~~ 234 (244)
T TIGR00685 160 ELKPRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIG-SGS--KKTVAKFHLT--GPQQ 234 (244)
T ss_pred EEeeCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEe-cCC--cCCCceEeCC--CHHH
Confidence 3455567898888877654 34689999999999999999 4788885 332 3566888876 5666
Q ss_pred HHHHH
Q 001616 808 VATVL 812 (1044)
Q Consensus 808 I~~~i 812 (1044)
+...+
T Consensus 235 v~~~L 239 (244)
T TIGR00685 235 VLEFL 239 (244)
T ss_pred HHHHH
Confidence 65555
No 150
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=90.49 E-value=0.95 Score=46.22 Aligned_cols=81 Identities=17% Similarity=0.143 Sum_probs=62.1
Q ss_pred cCCCchhHHHHHHHHHhcCC--EEEEEcCC-------CHHHHHHHHHHcCCcccccccccceeecchhhhcCCHHHHHHH
Q 001616 663 KDPCRPGVQKAVEACQSAGV--EIKMITGD-------NVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQK 733 (1044)
Q Consensus 663 ~D~lR~~v~~aI~~l~~aGI--~v~mlTGD-------~~~tA~aIA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~ 733 (1044)
++.+-|++.+.+++|++.+. +|.++|-- +...|.++++.+||.--
T Consensus 57 ~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIpvl-------------------------- 110 (168)
T PF09419_consen 57 EDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGIPVL-------------------------- 110 (168)
T ss_pred cCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCCcEE--------------------------
Confidence 56788999999999999987 59999986 48899999999998520
Q ss_pred hccccEEeecChhhHHHHHHHHHhc-----CCEEEEEcCCc-CCHHH
Q 001616 734 VDKIRVMARSSPFDKLLMVQCLKKK-----GHVVAVTGDGT-NDAPA 774 (1044)
Q Consensus 734 ~~~~~V~ar~sP~~K~~lV~~lq~~-----g~vVa~~GDG~-NDapa 774 (1044)
.+..-.|.-..++.+.++.+ -+.++|+||-. -|+-+
T Consensus 111 -----~h~~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl~ 152 (168)
T PF09419_consen 111 -----RHRAKKPGCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVLM 152 (168)
T ss_pred -----EeCCCCCccHHHHHHHHhhccCCCCchhEEEEcchHHHHHHH
Confidence 13335786667888888765 55699999963 35443
No 151
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=89.61 E-value=0.48 Score=44.19 Aligned_cols=48 Identities=19% Similarity=0.266 Sum_probs=35.1
Q ss_pred EecccCCCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHH---HHcCCcc
Q 001616 659 IVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIA---TECGILR 706 (1044)
Q Consensus 659 ~vgi~D~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA---~~~GI~~ 706 (1044)
++.-.+.+=||+.++|+.|+++|++++++|.....+...++ +.+|+..
T Consensus 8 vl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~ 58 (101)
T PF13344_consen 8 VLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPV 58 (101)
T ss_dssp TSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT-
T ss_pred EeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCC
Confidence 33445667799999999999999999999999877766555 5567754
No 152
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=89.38 E-value=0.46 Score=50.78 Aligned_cols=94 Identities=15% Similarity=0.162 Sum_probs=61.6
Q ss_pred CCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCcccccccccceeecchhhhcCCHHHHHHHhccccEEeecC
Q 001616 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (1044)
Q Consensus 665 ~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~ar~s 744 (1044)
++.||++++++.| ++++.++|+.....+...=+..|+...- ...++.+.+.. +..
T Consensus 88 ~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~~F----~~~v~~~~~~~------------------~~K 142 (221)
T PRK10563 88 EPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHYF----PDKLFSGYDIQ------------------RWK 142 (221)
T ss_pred CcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHHhC----cceEeeHHhcC------------------CCC
Confidence 4568999999998 4899999999888888877778886421 01233333221 112
Q ss_pred hhhHHHHHHHHHhc---CCEEEEEcCCcCCHHHHhhCCcceee
Q 001616 745 PFDKLLMVQCLKKK---GHVVAVTGDGTNDAPALKEADVGLSM 784 (1044)
Q Consensus 745 P~~K~~lV~~lq~~---g~vVa~~GDG~NDapaLk~AdVGiam 784 (1044)
|.- ..+...+++. .+.++++||..+|..+=++|++....
T Consensus 143 P~p-~~~~~a~~~~~~~p~~~l~igDs~~di~aA~~aG~~~i~ 184 (221)
T PRK10563 143 PDP-ALMFHAAEAMNVNVENCILVDDSSAGAQSGIAAGMEVFY 184 (221)
T ss_pred CCh-HHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCEEEE
Confidence 211 1222233333 34589999999999999999977653
No 153
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=89.23 E-value=0.67 Score=47.19 Aligned_cols=92 Identities=20% Similarity=0.144 Sum_probs=57.8
Q ss_pred CchhHHHHHHHHHhcCCEEEEEcCCC---------------HHHHHHHHHHcCCcccccccccceeec----chhhhcCC
Q 001616 666 CRPGVQKAVEACQSAGVEIKMITGDN---------------VFTAKAIATECGILRLDQQVEKGEVVE----GVEFRNYT 726 (1044)
Q Consensus 666 lR~~v~~aI~~l~~aGI~v~mlTGD~---------------~~tA~aIA~~~GI~~~~~~~~~~~vi~----g~~~~~~~ 726 (1044)
+-||+.++++.|+++|+++.++|.-. ...+..+-++.|+.-. ..++. ..+.
T Consensus 30 ~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~fd------~ii~~~~~~~~~~---- 99 (161)
T TIGR01261 30 FEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGIIFD------DVLICPHFPDDNC---- 99 (161)
T ss_pred ECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCcee------EEEECCCCCCCCC----
Confidence 56999999999999999999999742 3455666677777410 11111 0000
Q ss_pred HHHHHHHhccccEEeecChhhHHHHH-HHHHhcC---CEEEEEcCCcCCHHHHhhCCccee
Q 001616 727 DEERIQKVDKIRVMARSSPFDKLLMV-QCLKKKG---HVVAVTGDGTNDAPALKEADVGLS 783 (1044)
Q Consensus 727 ~~~~~~~~~~~~V~ar~sP~~K~~lV-~~lq~~g---~vVa~~GDG~NDapaLk~AdVGia 783 (1044)
. ...|. ..++ ..+++.| ..+.|+||+.+|..+-+.|++-..
T Consensus 100 -------------~-~~KP~--~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i 144 (161)
T TIGR01261 100 -------------D-CRKPK--IKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGI 144 (161)
T ss_pred -------------C-CCCCC--HHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEE
Confidence 0 11232 2222 2333333 458899999999999999887654
No 154
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=89.16 E-value=0.5 Score=50.11 Aligned_cols=93 Identities=16% Similarity=0.144 Sum_probs=55.0
Q ss_pred CCchhHHHHHHHHHhcCCEEEEEcCCCHHH--HHHHHHHcCCcccccccccceeecchhhhcCCHHHHHHHhccccEEee
Q 001616 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFT--AKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMAR 742 (1044)
Q Consensus 665 ~lR~~v~~aI~~l~~aGI~v~mlTGD~~~t--A~aIA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~ar 742 (1044)
++.||+.++++.|+++|+++.++|...... ........|+... ...++...+. ..
T Consensus 94 ~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~-----fd~v~~s~~~------------------~~ 150 (211)
T TIGR02247 94 KLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMAL-----FDAVVESCLE------------------GL 150 (211)
T ss_pred ccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhh-----CCEEEEeeec------------------CC
Confidence 578999999999999999999999875433 2222223344221 1111111100 01
Q ss_pred cChhhHHHHHHHHHhc---CCEEEEEcCCcCCHHHHhhCCcc
Q 001616 743 SSPFDKLLMVQCLKKK---GHVVAVTGDGTNDAPALKEADVG 781 (1044)
Q Consensus 743 ~sP~~K~~lV~~lq~~---g~vVa~~GDG~NDapaLk~AdVG 781 (1044)
..|.-. -+-..+++. .+.+.|+||...|..+=++|++-
T Consensus 151 ~KP~p~-~~~~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~~ 191 (211)
T TIGR02247 151 RKPDPR-IYQLMLERLGVAPEECVFLDDLGSNLKPAAALGIT 191 (211)
T ss_pred CCCCHH-HHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHcCCE
Confidence 123221 222333333 34578889999999998988874
No 155
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=88.68 E-value=1 Score=48.34 Aligned_cols=96 Identities=17% Similarity=0.159 Sum_probs=63.2
Q ss_pred cCCCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcC---CcccccccccceeecchhhhcCCHHHHHHHhccccE
Q 001616 663 KDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECG---ILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRV 739 (1044)
Q Consensus 663 ~D~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~G---I~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V 739 (1044)
+-++.||+.++++.|+++|+++.++|..+....+.+-+..+ +..- +++ .+. ..+
T Consensus 93 ~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~---------f~~-------------~fd-~~~ 149 (220)
T TIGR01691 93 TSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPY---------FSG-------------YFD-TTV 149 (220)
T ss_pred ccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhh---------cce-------------EEE-eCc
Confidence 45789999999999999999999999998887777666542 2110 000 000 001
Q ss_pred EeecChhhHHHHHHHHHhc---CCEEEEEcCCcCCHHHHhhCCcceee
Q 001616 740 MARSSPFDKLLMVQCLKKK---GHVVAVTGDGTNDAPALKEADVGLSM 784 (1044)
Q Consensus 740 ~ar~sP~~K~~lV~~lq~~---g~vVa~~GDG~NDapaLk~AdVGiam 784 (1044)
. ..| +...+.+.+++. .+.+.++||...|+.|=++|++-...
T Consensus 150 g--~KP-~p~~y~~i~~~lgv~p~e~lfVgDs~~Di~AA~~AG~~ti~ 194 (220)
T TIGR01691 150 G--LKT-EAQSYVKIAGQLGSPPREILFLSDIINELDAARKAGLHTGQ 194 (220)
T ss_pred c--cCC-CHHHHHHHHHHhCcChhHEEEEeCCHHHHHHHHHcCCEEEE
Confidence 1 123 222333344443 35689999999999999999886543
No 156
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=88.39 E-value=1.5 Score=44.87 Aligned_cols=40 Identities=13% Similarity=0.218 Sum_probs=31.6
Q ss_pred CchhHHHHHHHHHhcCCEEEEEcCCCHH------------HHHHHHHHcCCc
Q 001616 666 CRPGVQKAVEACQSAGVEIKMITGDNVF------------TAKAIATECGIL 705 (1044)
Q Consensus 666 lR~~v~~aI~~l~~aGI~v~mlTGD~~~------------tA~aIA~~~GI~ 705 (1044)
+-||+.++++.|+++|+++.++|.-... .+..+-+.+|+.
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~ 94 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVP 94 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCC
Confidence 3499999999999999999999975432 345667778874
No 157
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=88.28 E-value=1.4 Score=50.20 Aligned_cols=91 Identities=11% Similarity=-0.015 Sum_probs=67.2
Q ss_pred CCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHH----cCCcccccccccceeecchhhhcCCHHHHHHHhccccEE
Q 001616 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATE----CGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVM 740 (1044)
Q Consensus 665 ~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~----~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~ 740 (1044)
++.+++.++++.|++.|+++.++|.-+...|..+-+. .|+...- ..
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f------------------------------~~ 80 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDF------------------------------DA 80 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHe------------------------------eE
Confidence 4579999999999999999999999999999998888 7765421 01
Q ss_pred eecChhhHHHHHHHH-Hhc---CCEEEEEcCCcCCHHHHhhCCcceeeC
Q 001616 741 ARSSPFDKLLMVQCL-KKK---GHVVAVTGDGTNDAPALKEADVGLSMG 785 (1044)
Q Consensus 741 ar~sP~~K~~lV~~l-q~~---g~vVa~~GDG~NDapaLk~AdVGiamg 785 (1044)
...++.-|...++.+ ++. -..+.++||...|..+.+.+...+.+-
T Consensus 81 ~~~~~~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~~~~~ 129 (320)
T TIGR01686 81 RSINWGPKSESLRKIAKKLNLGTDSFLFIDDNPAERANVKITLPVKTLL 129 (320)
T ss_pred EEEecCchHHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCCCccC
Confidence 112233454444433 333 357899999999999999988876543
No 158
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=86.47 E-value=6.6 Score=43.19 Aligned_cols=40 Identities=23% Similarity=0.295 Sum_probs=32.9
Q ss_pred CchhHHHHHHHHHhcCCEEEEEcCCCHHH---HHHHHHHcCCc
Q 001616 666 CRPGVQKAVEACQSAGVEIKMITGDNVFT---AKAIATECGIL 705 (1044)
Q Consensus 666 lR~~v~~aI~~l~~aGI~v~mlTGD~~~t---A~aIA~~~GI~ 705 (1044)
+=|++.++|+.|+++|++++++||.+..+ .....+++|+.
T Consensus 22 ~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~ 64 (257)
T TIGR01458 22 AVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFD 64 (257)
T ss_pred cCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 77899999999999999999999987776 44444556775
No 159
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=86.32 E-value=0.96 Score=47.35 Aligned_cols=113 Identities=23% Similarity=0.341 Sum_probs=70.7
Q ss_pred CCchhHHHHHHHHHhcCC-EEEEEcCCCHHHHHHHHHHcCCccc-------cccc--ccceeecchhhhcCCHHHHHHHh
Q 001616 665 PCRPGVQKAVEACQSAGV-EIKMITGDNVFTAKAIATECGILRL-------DQQV--EKGEVVEGVEFRNYTDEERIQKV 734 (1044)
Q Consensus 665 ~lR~~v~~aI~~l~~aGI-~v~mlTGD~~~tA~aIA~~~GI~~~-------~~~~--~~~~vi~g~~~~~~~~~~~~~~~ 734 (1044)
|.-|++.++|+.+++.|- .++++|--|..--..+-+..||..- .... ++.+.+. .+.
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~F~~IfTNPa~~da~G~L~v~-----pyH-------- 150 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDLFSEIFTNPACVDASGRLLVR-----PYH-------- 150 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHHHHHHhcCCcccCCCCcEEee-----cCC--------
Confidence 567999999999999996 8999999998888777777777531 0000 0111110 000
Q ss_pred ccccEEeecChh-hHHHHHHHHHhcC-------CEEEEEcCCcCC-HHHHhhCCcceeeCCCchHH
Q 001616 735 DKIRVMARSSPF-DKLLMVQCLKKKG-------HVVAVTGDGTND-APALKEADVGLSMGIQGTEV 791 (1044)
Q Consensus 735 ~~~~V~ar~sP~-~K~~lV~~lq~~g-------~vVa~~GDG~ND-apaLk~AdVGiamg~~gt~v 791 (1044)
.-.=+.||-|. =|..++..++..+ +.+-.+|||.|| +|+++...--+||--.|=.+
T Consensus 151 -~~hsC~~CPsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~ampRkgfpl 215 (256)
T KOG3120|consen 151 -TQHSCNLCPSNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMPRKGFPL 215 (256)
T ss_pred -CCCccCcCchhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceecccCCCch
Confidence 00123344332 3666666655431 278899999999 68877776667776555443
No 160
>PLN02423 phosphomannomutase
Probab=85.76 E-value=5.5 Score=43.51 Aligned_cols=38 Identities=26% Similarity=0.391 Sum_probs=32.4
Q ss_pred hHHHHHHHHHhcCCEEEEEcC----CcCCHHHHhh-CCcceeeC
Q 001616 747 DKLLMVQCLKKKGHVVAVTGD----GTNDAPALKE-ADVGLSMG 785 (1044)
Q Consensus 747 ~K~~lV~~lq~~g~vVa~~GD----G~NDapaLk~-AdVGiamg 785 (1044)
+|..-++.|+ ....|+++|| |.||.+||+. -=.|+++.
T Consensus 189 nKg~al~~L~-~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~ 231 (245)
T PLN02423 189 DKTYCLQFLE-DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVT 231 (245)
T ss_pred CHHHHHHHhc-CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeC
Confidence 7888888888 6667899999 8999999996 77788775
No 161
>PLN03017 trehalose-phosphatase
Probab=85.55 E-value=14 Score=42.56 Aligned_cols=46 Identities=17% Similarity=0.117 Sum_probs=36.6
Q ss_pred CeEEEEEecccC--CCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHH
Q 001616 653 GLTLLGIVGIKD--PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIA 699 (1044)
Q Consensus 653 ~l~llG~vgi~D--~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA 699 (1044)
|.||+-++.-.| .+-++..++|++|. .|+.+.++||........+.
T Consensus 119 DGTL~Piv~~p~~a~i~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~ 166 (366)
T PLN03017 119 DGTLSPIVDDPDKAFMSSKMRRTVKKLA-KCFPTAIVTGRCIDKVYNFV 166 (366)
T ss_pred CCcCcCCcCCcccccCCHHHHHHHHHHh-cCCcEEEEeCCCHHHHHHhh
Confidence 446665554333 37799999999999 78999999999999999874
No 162
>PLN02645 phosphoglycolate phosphatase
Probab=85.01 E-value=1.3 Score=50.20 Aligned_cols=48 Identities=17% Similarity=0.292 Sum_probs=38.4
Q ss_pred EEecccCCCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHH---HHcCCc
Q 001616 658 GIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIA---TECGIL 705 (1044)
Q Consensus 658 G~vgi~D~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA---~~~GI~ 705 (1044)
|.+.-.+.+=|++.++|+.|++.|++++++|+....+...++ +++|+.
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~ 87 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLN 87 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCC
Confidence 333334555699999999999999999999999988887777 557764
No 163
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=84.84 E-value=1.8 Score=45.40 Aligned_cols=94 Identities=11% Similarity=0.144 Sum_probs=56.4
Q ss_pred CCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHH-cCCcccccccccceeecchhhhcCCHHHHHHHhccccEEeec
Q 001616 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATE-CGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARS 743 (1044)
Q Consensus 665 ~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~-~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~ar~ 743 (1044)
++.||+.++++.|+++|+++.++|.-+.......-.. .++... ...++...+. ...
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~-----fd~v~~s~~~------------------~~~ 140 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAA-----ADHIYLSQDL------------------GMR 140 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHh-----cCEEEEeccc------------------CCC
Confidence 4789999999999999999999999776554332222 233211 1112211111 111
Q ss_pred ChhhHHHHHHHHHhc---CCEEEEEcCCcCCHHHHhhCCcce
Q 001616 744 SPFDKLLMVQCLKKK---GHVVAVTGDGTNDAPALKEADVGL 782 (1044)
Q Consensus 744 sP~~K~~lV~~lq~~---g~vVa~~GDG~NDapaLk~AdVGi 782 (1044)
.|. -.-.-..+++. .+.+.++||...|+.+-++|++-.
T Consensus 141 KP~-p~~~~~~~~~~~~~p~~~l~vgD~~~di~aA~~aG~~~ 181 (199)
T PRK09456 141 KPE-ARIYQHVLQAEGFSAADAVFFDDNADNIEAANALGITS 181 (199)
T ss_pred CCC-HHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHcCCEE
Confidence 332 11222333333 355789999999999988888753
No 164
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=84.70 E-value=4.9 Score=41.84 Aligned_cols=51 Identities=22% Similarity=0.367 Sum_probs=43.7
Q ss_pred EEEEEecccCCCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHH---cCCc
Q 001616 655 TLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATE---CGIL 705 (1044)
Q Consensus 655 ~llG~vgi~D~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~---~GI~ 705 (1044)
.+-|.+.++|..-|++.+|++.|+.++++|+.+|.-..+.-+.+.++ ||+.
T Consensus 13 DlSGtLh~e~~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf~ 66 (262)
T KOG3040|consen 13 DLSGTLHIEDAAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGFD 66 (262)
T ss_pred eccceEecccccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCCC
Confidence 45699999999999999999999999999999998877777776655 5664
No 165
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=80.96 E-value=9 Score=38.67 Aligned_cols=103 Identities=17% Similarity=0.152 Sum_probs=67.4
Q ss_pred cCCCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHH---c-----CCcccccccccceeecch-hhhcCCHHHHHHH
Q 001616 663 KDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATE---C-----GILRLDQQVEKGEVVEGV-EFRNYTDEERIQK 733 (1044)
Q Consensus 663 ~D~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~---~-----GI~~~~~~~~~~~vi~g~-~~~~~~~~~~~~~ 733 (1044)
+|..++|+.+.++..++.|.++..+|+...--|...-.= . ++.. +.+...-. -+..+..
T Consensus 25 ~d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP~------Gpv~~sP~~l~~al~r------ 92 (157)
T PF08235_consen 25 KDWTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNLPD------GPVLLSPDSLFSALHR------ 92 (157)
T ss_pred chhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccCCC------CCEEECCcchhhhhhc------
Confidence 379999999999999999999999999987655443221 1 2221 11111100 0111100
Q ss_pred hccccEEeecChhhHHHHHHHHHhc-----CCEEEEEcCCcCCHHHHhhCCcc
Q 001616 734 VDKIRVMARSSPFDKLLMVQCLKKK-----GHVVAVTGDGTNDAPALKEADVG 781 (1044)
Q Consensus 734 ~~~~~V~ar~sP~~K~~lV~~lq~~-----g~vVa~~GDG~NDapaLk~AdVG 781 (1044)
.|..+-.-+.|....+.++.. ...++..|...+|+.+.++++|-
T Consensus 93 ----Evi~~~p~~fK~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 93 ----EVISKDPEEFKIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred ----cccccChHHHHHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCC
Confidence 144454456788888888864 45678899999999999877654
No 166
>PHA02597 30.2 hypothetical protein; Provisional
Probab=80.73 E-value=5.1 Score=41.83 Aligned_cols=94 Identities=15% Similarity=0.140 Sum_probs=54.9
Q ss_pred CCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCcccccccccceeecchhhhcCCHHHHHHHhccccEEeecC
Q 001616 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (1044)
Q Consensus 665 ~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~ar~s 744 (1044)
++.||+.++++.|++.+ +..++|.-+..+....-+.+|+..-... ....+ +.++..
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l~~~f~~-~f~~i----------------------~~~~~~ 129 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNLNALFPG-AFSEV----------------------LMCGHD 129 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCHHHhCCC-cccEE----------------------EEeccC
Confidence 36899999999999985 5666676544444434455665421000 00111 122222
Q ss_pred hhhHHHHHHHHHhcC-CEEEEEcCCcCCHHHHhhC--Ccce
Q 001616 745 PFDKLLMVQCLKKKG-HVVAVTGDGTNDAPALKEA--DVGL 782 (1044)
Q Consensus 745 P~~K~~lV~~lq~~g-~vVa~~GDG~NDapaLk~A--dVGi 782 (1044)
...+..+...+++.| +.++++||..+|..+-++| ++-.
T Consensus 130 ~~kp~~~~~a~~~~~~~~~v~vgDs~~di~aA~~a~~Gi~~ 170 (197)
T PHA02597 130 ESKEKLFIKAKEKYGDRVVCFVDDLAHNLDAAHEALSQLPV 170 (197)
T ss_pred cccHHHHHHHHHHhCCCcEEEeCCCHHHHHHHHHHHcCCcE
Confidence 212223333444444 4577999999999999999 8854
No 167
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=79.49 E-value=3.7 Score=42.43 Aligned_cols=95 Identities=9% Similarity=-0.036 Sum_probs=60.3
Q ss_pred CCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCcccccccccceeecchhhhcCCHHHHHHHhccccEEeecC
Q 001616 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (1044)
Q Consensus 665 ~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~ar~s 744 (1044)
++.+|+.++++.|+ .++.++|.-+...+..+.+..|+... ...++.+.+.... .....
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~-----fd~i~~~~~~~~~--------------~~~~K 141 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDC-----FDGIFCFDTANPD--------------YLLPK 141 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhh-----hCeEEEeecccCc--------------cCCCC
Confidence 36799999999998 47899999999999999999998542 1122222221100 00023
Q ss_pred hhhH--HHHHHHHHhcCCEEEEEcCCcCCHHHHhhCCcc
Q 001616 745 PFDK--LLMVQCLKKKGHVVAVTGDGTNDAPALKEADVG 781 (1044)
Q Consensus 745 P~~K--~~lV~~lq~~g~vVa~~GDG~NDapaLk~AdVG 781 (1044)
|... ..+++.+....+.+.++||...|..+=++|++-
T Consensus 142 P~p~~~~~~~~~~~~~~~~~l~vgD~~~di~aA~~~G~~ 180 (184)
T TIGR01993 142 PSPQAYEKALREAGVDPERAIFFDDSARNIAAAKALGMK 180 (184)
T ss_pred CCHHHHHHHHHHhCCCccceEEEeCCHHHHHHHHHcCCE
Confidence 4221 222333333345688999999999888888764
No 168
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=78.36 E-value=7.3 Score=40.31 Aligned_cols=97 Identities=25% Similarity=0.289 Sum_probs=62.0
Q ss_pred CchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCcccccccccceeecchhhhcCCHH---HHHHHhccc--cEE
Q 001616 666 CRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDE---ERIQKVDKI--RVM 740 (1044)
Q Consensus 666 lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~---~~~~~~~~~--~V~ 740 (1044)
+.|++.+++..++++|.+++|+|- +-||-.. -.++.+|..+... .+.+.--++ ..+
T Consensus 32 ~~~g~i~al~~l~~~gy~lVvvTN-----------QsGi~rg--------yf~~~~f~~~~~~m~~~l~~~gv~id~i~~ 92 (181)
T COG0241 32 FIPGVIPALLKLQRAGYKLVVVTN-----------QSGIGRG--------YFTEADFDKLHNKMLKILASQGVKIDGILY 92 (181)
T ss_pred cCccHHHHHHHHHhCCCeEEEEEC-----------CCCcccc--------CccHHHHHHHHHHHHHHHHHcCCccceEEE
Confidence 469999999999999999999996 4455442 2334444433221 111111011 134
Q ss_pred eecChhh--------HHHHHHHHHhcC---CEEEEEcCCcCCHHHHhhCCcc
Q 001616 741 ARSSPFD--------KLLMVQCLKKKG---HVVAVTGDGTNDAPALKEADVG 781 (1044)
Q Consensus 741 ar~sP~~--------K~~lV~~lq~~g---~vVa~~GDG~NDapaLk~AdVG 781 (1044)
|.-.|++ ...+.+.+++.+ ....|+||-..|..+-..|+++
T Consensus 93 Cph~p~~~c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~ 144 (181)
T COG0241 93 CPHHPEDNCDCRKPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIK 144 (181)
T ss_pred CCCCCCCCCcccCCChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCC
Confidence 4444443 456677777765 6678999999999988777776
No 169
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=78.25 E-value=4.8 Score=41.56 Aligned_cols=89 Identities=19% Similarity=0.223 Sum_probs=58.6
Q ss_pred chhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCcccccccccceeecchhhhcCCHHHHHHHhccccEEeecChh
Q 001616 667 RPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPF 746 (1044)
Q Consensus 667 R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~ar~sP~ 746 (1044)
-|+ .+.++.+++. ++..++||.....+..+-+..|+... ...++.+.+.. +..|.
T Consensus 90 ~~~-~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~-----fd~i~~~~~~~------------------~~KP~ 144 (188)
T PRK10725 90 LPL-IEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRY-----FDAVVAADDVQ------------------HHKPA 144 (188)
T ss_pred ccH-HHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhH-----ceEEEehhhcc------------------CCCCC
Confidence 354 5889999875 89999999999999999999998642 12333333221 11222
Q ss_pred hHHHHHHHHHhc---CCEEEEEcCCcCCHHHHhhCCcc
Q 001616 747 DKLLMVQCLKKK---GHVVAVTGDGTNDAPALKEADVG 781 (1044)
Q Consensus 747 ~K~~lV~~lq~~---g~vVa~~GDG~NDapaLk~AdVG 781 (1044)
.. -+...+++. ...+.++||..+|+.+=++|++-
T Consensus 145 p~-~~~~~~~~~~~~~~~~l~igDs~~di~aA~~aG~~ 181 (188)
T PRK10725 145 PD-TFLRCAQLMGVQPTQCVVFEDADFGIQAARAAGMD 181 (188)
T ss_pred hH-HHHHHHHHcCCCHHHeEEEeccHhhHHHHHHCCCE
Confidence 11 122333333 23477899999999999998875
No 170
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=77.21 E-value=18 Score=40.25 Aligned_cols=44 Identities=14% Similarity=0.197 Sum_probs=33.5
Q ss_pred cCCCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHH---HHHHcCCcc
Q 001616 663 KDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKA---IATECGILR 706 (1044)
Q Consensus 663 ~D~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~a---IA~~~GI~~ 706 (1044)
.+.+=|++.++|+.+++.|++++++|+....+... --+++|+..
T Consensus 16 ~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~ 62 (279)
T TIGR01452 16 GERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNG 62 (279)
T ss_pred CCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCC
Confidence 46667889999999999999999999976444433 335577753
No 171
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=74.25 E-value=6.6 Score=43.64 Aligned_cols=41 Identities=10% Similarity=0.105 Sum_probs=38.4
Q ss_pred Cc-hhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCcc
Q 001616 666 CR-PGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILR 706 (1044)
Q Consensus 666 lR-~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~ 706 (1044)
+| |++.++++.|+++|+++.++|+-....+.+.-+++||..
T Consensus 146 irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~ 187 (301)
T TIGR01684 146 IRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDR 187 (301)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCc
Confidence 67 999999999999999999999999999999999999975
No 172
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=73.68 E-value=6.2 Score=42.64 Aligned_cols=89 Identities=22% Similarity=0.235 Sum_probs=54.6
Q ss_pred CCCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHH---HHHHcCCcccccccccceeecchhh-hcCCHHHHHHHhccccE
Q 001616 664 DPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKA---IATECGILRLDQQVEKGEVVEGVEF-RNYTDEERIQKVDKIRV 739 (1044)
Q Consensus 664 D~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~a---IA~~~GI~~~~~~~~~~~vi~g~~~-~~~~~~~~~~~~~~~~V 739 (1044)
+|.=|++.+.++.+++.|++|..+||.+..--.+ =-++.|.... ..+++.+..- +.
T Consensus 114 ~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~-----~~l~lr~~~~~~~--------------- 173 (229)
T PF03767_consen 114 APAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGW-----DHLILRPDKDPSK--------------- 173 (229)
T ss_dssp GEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTB-----SCGEEEEESSTSS---------------
T ss_pred CcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCcc-----chhcccccccccc---------------
Confidence 3455889999999999999999999986552222 2334564431 1122111110 00
Q ss_pred EeecChhhHHHHHHHHHhcCC-EEEEEcCCcCCHHH
Q 001616 740 MARSSPFDKLLMVQCLKKKGH-VVAVTGDGTNDAPA 774 (1044)
Q Consensus 740 ~ar~sP~~K~~lV~~lq~~g~-vVa~~GDG~NDapa 774 (1044)
....+-|..--+.+++.|+ +++.+||-.+|...
T Consensus 174 --~~~~~yK~~~r~~i~~~Gy~Ii~~iGD~~~D~~~ 207 (229)
T PF03767_consen 174 --KSAVEYKSERRKEIEKKGYRIIANIGDQLSDFSG 207 (229)
T ss_dssp --------SHHHHHHHHHTTEEEEEEEESSGGGCHC
T ss_pred --ccccccchHHHHHHHHcCCcEEEEeCCCHHHhhc
Confidence 0012347788888888854 66889999999764
No 173
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=70.87 E-value=23 Score=39.10 Aligned_cols=87 Identities=21% Similarity=0.224 Sum_probs=52.5
Q ss_pred cCCCchhHHHHHHHHHhcCCEEEEEcCCCHH----HHHHHHHHcCCcccccccccceeecchh-hhcCCHHHHHHHhccc
Q 001616 663 KDPCRPGVQKAVEACQSAGVEIKMITGDNVF----TAKAIATECGILRLDQQVEKGEVVEGVE-FRNYTDEERIQKVDKI 737 (1044)
Q Consensus 663 ~D~lR~~v~~aI~~l~~aGI~v~mlTGD~~~----tA~aIA~~~GI~~~~~~~~~~~vi~g~~-~~~~~~~~~~~~~~~~ 737 (1044)
+.|.=|++.+..+.+++.|++|+++||.... |..++. +.|.... ..+++-+.. -+
T Consensus 143 ~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~-kaGy~~~-----~~LiLR~~~D~~-------------- 202 (275)
T TIGR01680 143 EAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLK-KAGYHTW-----EKLILKDPQDNS-------------- 202 (275)
T ss_pred cCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHH-HcCCCCc-----ceeeecCCCCCc--------------
Confidence 4567789999999999999999999999864 333332 2465431 112221110 00
Q ss_pred cEEeecChhhHHHHHHHHHhcCC-EEEEEcCCcCCH
Q 001616 738 RVMARSSPFDKLLMVQCLKKKGH-VVAVTGDGTNDA 772 (1044)
Q Consensus 738 ~V~ar~sP~~K~~lV~~lq~~g~-vVa~~GDG~NDa 772 (1044)
.....+-|...-+.+.+.|+ +++.+||-.+|.
T Consensus 203 ---~~~av~yKs~~R~~li~eGYrIv~~iGDq~sDl 235 (275)
T TIGR01680 203 ---AENAVEYKTAARAKLIQEGYNIVGIIGDQWNDL 235 (275)
T ss_pred ---cchhHHHHHHHHHHHHHcCceEEEEECCCHHhc
Confidence 00011235444455555665 568899998886
No 174
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=70.11 E-value=10 Score=40.74 Aligned_cols=98 Identities=18% Similarity=0.202 Sum_probs=69.4
Q ss_pred CCCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCcccccccccceeecchhhhcCCHHHHHHHhccccEEeec
Q 001616 664 DPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARS 743 (1044)
Q Consensus 664 D~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~ar~ 743 (1044)
.++.||+.+.++.|++.|+.+...|+-....+..+.+..|+... ...++++.+...- +-
T Consensus 85 ~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~-----f~~~v~~~dv~~~----------------KP 143 (221)
T COG0637 85 LKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDY-----FDVIVTADDVARG----------------KP 143 (221)
T ss_pred CCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhh-----cchhccHHHHhcC----------------CC
Confidence 46889999999999999999999999999999999999999864 2233444333211 12
Q ss_pred ChhhHHHHHHHHHhcCCEEEEEcCCcCCHHHHhhCCcce
Q 001616 744 SPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGL 782 (1044)
Q Consensus 744 sP~~K~~lV~~lq~~g~vVa~~GDG~NDapaLk~AdVGi 782 (1044)
.|+-=+.-.+.|.-.-..+.++.|..|.+.|-++|+.-+
T Consensus 144 ~Pd~yL~Aa~~Lgv~P~~CvviEDs~~Gi~Aa~aAGm~v 182 (221)
T COG0637 144 APDIYLLAAERLGVDPEECVVVEDSPAGIQAAKAAGMRV 182 (221)
T ss_pred CCHHHHHHHHHcCCChHHeEEEecchhHHHHHHHCCCEE
Confidence 233223333333223455788999999999999998654
No 175
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=68.76 E-value=10 Score=42.20 Aligned_cols=41 Identities=15% Similarity=0.092 Sum_probs=37.3
Q ss_pred Cc-hhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCcc
Q 001616 666 CR-PGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILR 706 (1044)
Q Consensus 666 lR-~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~ 706 (1044)
+| |++.+++++|+++|+++.++|+-+...+..+.++.|+..
T Consensus 148 irdp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~ 189 (303)
T PHA03398 148 IRDPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEG 189 (303)
T ss_pred cCChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCc
Confidence 46 999999999999999999999888888899999999964
No 176
>PLN02151 trehalose-phosphatase
Probab=66.49 E-value=82 Score=36.29 Aligned_cols=34 Identities=6% Similarity=0.080 Sum_probs=29.0
Q ss_pred CchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHH
Q 001616 666 CRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIAT 700 (1044)
Q Consensus 666 lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~ 700 (1044)
+-++.+++++.|. .+..|.++||.+......+..
T Consensus 121 ~~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~~ 154 (354)
T PLN02151 121 MSKKMRNTVRKLA-KCFPTAIVSGRCREKVSSFVK 154 (354)
T ss_pred CCHHHHHHHHHHh-cCCCEEEEECCCHHHHHHHcC
Confidence 5688999999999 457999999999998887764
No 177
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=65.61 E-value=15 Score=37.42 Aligned_cols=86 Identities=23% Similarity=0.292 Sum_probs=60.3
Q ss_pred CchhHHHHHHHHHhcCCEEEEEcCCCH----HHHHHHHHHcCCcccccccccceeecchhhhcCCHHHHHHHhccccEEe
Q 001616 666 CRPGVQKAVEACQSAGVEIKMITGDNV----FTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMA 741 (1044)
Q Consensus 666 lR~~v~~aI~~l~~aGI~v~mlTGD~~----~tA~aIA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~a 741 (1044)
+++=+++.|..-++.|=+++.+||... .+++.+|+...|.+.+. .+|+
T Consensus 115 PKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~~m~p----------------------------v~f~ 166 (237)
T COG3700 115 PKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHITNMNP----------------------------VIFA 166 (237)
T ss_pred hHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccCCCcc----------------------------eeec
Confidence 455667888888999999999999865 45677888887754321 1455
Q ss_pred ecChh-hHHHHHHHHHhcCCEEEEEcCCcCCHHHHhhCCc
Q 001616 742 RSSPF-DKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADV 780 (1044)
Q Consensus 742 r~sP~-~K~~lV~~lq~~g~vVa~~GDG~NDapaLk~AdV 780 (1044)
...|. .+..-...+|+++-. ..-||.-||..|-|+|++
T Consensus 167 Gdk~k~~qy~Kt~~i~~~~~~-IhYGDSD~Di~AAkeaG~ 205 (237)
T COG3700 167 GDKPKPGQYTKTQWIQDKNIR-IHYGDSDNDITAAKEAGA 205 (237)
T ss_pred cCCCCcccccccHHHHhcCce-EEecCCchhhhHHHhcCc
Confidence 44441 223335667776644 467999999999999865
No 178
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=64.45 E-value=4.3 Score=41.29 Aligned_cols=40 Identities=18% Similarity=0.028 Sum_probs=37.1
Q ss_pred CCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCc
Q 001616 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGIL 705 (1044)
Q Consensus 665 ~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~ 705 (1044)
..|||+.+.++.|.+. ..+.+.|--....|..+...++..
T Consensus 42 ~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp~ 81 (162)
T TIGR02251 42 FKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDRG 81 (162)
T ss_pred EECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCcC
Confidence 5799999999999988 999999999999999999998864
No 179
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=64.28 E-value=18 Score=39.18 Aligned_cols=91 Identities=15% Similarity=0.096 Sum_probs=55.1
Q ss_pred CCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCcccccccccceeecchhhhcCCHHHHHHHhccccEEeecC
Q 001616 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (1044)
Q Consensus 665 ~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~ar~s 744 (1044)
++-||+.++++.|++. +++.++|.-+.. .+..|+... ...++...+. .+..
T Consensus 113 ~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~-----~~~~gl~~~-----fd~i~~~~~~------------------~~~K 163 (238)
T PRK10748 113 DVPQATHDTLKQLAKK-WPLVAITNGNAQ-----PELFGLGDY-----FEFVLRAGPH------------------GRSK 163 (238)
T ss_pred CCCccHHHHHHHHHcC-CCEEEEECCCch-----HHHCCcHHh-----hceeEecccC------------------CcCC
Confidence 4568999999999975 888889886554 145666432 1112211111 1122
Q ss_pred hhhHHHHHHHHHhc---CCEEEEEcCC-cCCHHHHhhCCcceeeC
Q 001616 745 PFDKLLMVQCLKKK---GHVVAVTGDG-TNDAPALKEADVGLSMG 785 (1044)
Q Consensus 745 P~~K~~lV~~lq~~---g~vVa~~GDG-~NDapaLk~AdVGiamg 785 (1044)
|. ...+-..+++. .+.+.|+||. ..|+.+=+.|++-....
T Consensus 164 P~-p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~i~v 207 (238)
T PRK10748 164 PF-SDMYHLAAEKLNVPIGEILHVGDDLTTDVAGAIRCGMQACWI 207 (238)
T ss_pred Cc-HHHHHHHHHHcCCChhHEEEEcCCcHHHHHHHHHCCCeEEEE
Confidence 32 12222333333 3568999999 59999989888765543
No 180
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=63.29 E-value=33 Score=41.47 Aligned_cols=99 Identities=15% Similarity=0.042 Sum_probs=62.1
Q ss_pred CchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHH-cCCcccc-cc--cccceeecchhhhcCCHHHHHHHhccccEEe
Q 001616 666 CRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATE-CGILRLD-QQ--VEKGEVVEGVEFRNYTDEERIQKVDKIRVMA 741 (1044)
Q Consensus 666 lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~-~GI~~~~-~~--~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~a 741 (1044)
+++++.+.+ +++|- ++++|+=...-++.+|++ +|+..-- .+ ....-..+|. +-.
T Consensus 111 l~~~a~~~~---~~~g~-~vvVSASp~~~Vepfa~~~LGid~VIgTeLev~~~G~~TG~------------------i~g 168 (497)
T PLN02177 111 VHPETWRVF---NSFGK-RYIITASPRIMVEPFVKTFLGADKVLGTELEVSKSGRATGF------------------MKK 168 (497)
T ss_pred cCHHHHHHH---HhCCC-EEEEECCcHHHHHHHHHHcCCCCEEEecccEECcCCEEeee------------------ecC
Confidence 677755544 56774 499999999999999988 7986310 00 0001111121 011
Q ss_pred --ecChhhHHHHHHHHHhcCCEEEEEcCCcCCHHHHhhCCcceeeCC
Q 001616 742 --RSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGI 786 (1044)
Q Consensus 742 --r~sP~~K~~lV~~lq~~g~vVa~~GDG~NDapaLk~AdVGiamg~ 786 (1044)
.|.-++|..-++..........+-||..||.|+|+.||-+.+++.
T Consensus 169 ~~~c~Ge~Kv~rl~~~~g~~~~~~aYgDS~sD~plL~~a~e~y~V~~ 215 (497)
T PLN02177 169 PGVLVGDHKRDAVLKEFGDALPDLGLGDRETDHDFMSICKEGYMVPR 215 (497)
T ss_pred CCCCccHHHHHHHHHHhCCCCceEEEECCccHHHHHHhCCccEEeCC
Confidence 134456877666332211222578999999999999999999984
No 181
>PRK10444 UMP phosphatase; Provisional
Probab=62.81 E-value=7.5 Score=42.53 Aligned_cols=45 Identities=16% Similarity=0.275 Sum_probs=39.0
Q ss_pred EEecccCCCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHc
Q 001616 658 GIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATEC 702 (1044)
Q Consensus 658 G~vgi~D~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~ 702 (1044)
|.+.-.+.+=|++.++++.|+++|++++++|+....+...+++++
T Consensus 10 GtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l 54 (248)
T PRK10444 10 GVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRF 54 (248)
T ss_pred CceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH
Confidence 444445677899999999999999999999999999998888885
No 182
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=60.30 E-value=36 Score=38.23 Aligned_cols=64 Identities=19% Similarity=0.248 Sum_probs=39.6
Q ss_pred EEeecChhhHHHHHHHHHh--cCCEEEEEcCC-cCCHH---HHhhCCcceeeCCCch---HHHhhccCEEEcc
Q 001616 739 VMARSSPFDKLLMVQCLKK--KGHVVAVTGDG-TNDAP---ALKEADVGLSMGIQGT---EVAKESSDIVILD 802 (1044)
Q Consensus 739 V~ar~sP~~K~~lV~~lq~--~g~vVa~~GDG-~NDap---aLk~AdVGiamg~~gt---~vAk~aaDivl~d 802 (1044)
-|.-|||.-=.++++...- .|+.|+++|-| .==.| +|.+++.-+.+-.+.+ ..+...||+++.-
T Consensus 137 ~~~PcTp~aii~lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~l~e~~~~ADIVIsa 209 (301)
T PRK14194 137 VLTPCTPSGCLRLLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDAKALCRQADIVVAA 209 (301)
T ss_pred CCCCCcHHHHHHHHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCCHHHHHhcCCEEEEe
Confidence 4566777766666665532 39999999997 44444 4666666665442222 2234568998863
No 183
>PTZ00445 p36-lilke protein; Provisional
Probab=60.12 E-value=15 Score=38.77 Aligned_cols=64 Identities=14% Similarity=0.255 Sum_probs=45.0
Q ss_pred HHHHHHHHHHHHhcccceeeeeeeecCchhhcccchHHHhhhhcccCeEEEE--EecccC----------CCchhHHHHH
Q 001616 607 RSQMENIIHGMAASSLRCIAFAYKQVSEEETAYNNDVKARQRLKEEGLTLLG--IVGIKD----------PCRPGVQKAV 674 (1044)
Q Consensus 607 ~~~~~~~i~~~a~~glR~l~~A~k~l~~~~~~~~~~~~~~~~~~e~~l~llG--~vgi~D----------~lR~~v~~aI 674 (1044)
++.....++.+.+.|.|++++-+ |.|+++ .=|--+ .++|+.+.-+
T Consensus 28 ~~~~~~~v~~L~~~GIk~Va~D~-----------------------DnTlI~~HsgG~~~~~~~~~~~~~~~tpefk~~~ 84 (219)
T PTZ00445 28 HESADKFVDLLNECGIKVIASDF-----------------------DLTMITKHSGGYIDPDNDDIRVLTSVTPDFKILG 84 (219)
T ss_pred HHHHHHHHHHHHHcCCeEEEecc-----------------------hhhhhhhhcccccCCCcchhhhhccCCHHHHHHH
Confidence 45566777888899999988644 112222 001222 2799999999
Q ss_pred HHHHhcCCEEEEEcCCCHH
Q 001616 675 EACQSAGVEIKMITGDNVF 693 (1044)
Q Consensus 675 ~~l~~aGI~v~mlTGD~~~ 693 (1044)
+.|+++||+|.++|=-...
T Consensus 85 ~~l~~~~I~v~VVTfSd~~ 103 (219)
T PTZ00445 85 KRLKNSNIKISVVTFSDKE 103 (219)
T ss_pred HHHHHCCCeEEEEEccchh
Confidence 9999999999999965544
No 184
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=59.91 E-value=1.6e+02 Score=38.92 Aligned_cols=176 Identities=14% Similarity=0.115 Sum_probs=88.0
Q ss_pred eCCeEEEEeecccccCcEEEeCCCCeeeccEEEEecCceeeecCCCCCCCCceeecCCCCceeeecceEeeCceEEEEEE
Q 001616 237 REARRLQISIFDLVVGDIVFLKIGDQIPADGLFLDGHSLQVDESSMTGESDHVEVDSTNNPFLFSGSKVADGYAQMLVVS 316 (1044)
Q Consensus 237 R~G~~~~I~~~dLvvGDIV~l~~Gd~VPADgill~g~~l~VDES~LTGEs~pv~k~~~~~~~l~sGt~v~~G~~~~~V~~ 316 (1044)
.-|....+...|.+|.|.+.++ |+..=+|=-.+.|++.-++-. .|+...+. .+..+.+|+-..--...+.=+.
T Consensus 185 v~GDiV~l~~Gd~IPaD~~li~-g~~l~VdES~LTGES~pv~K~--~~~~n~v~----~GT~v~~G~~~~iV~~tG~~T~ 257 (941)
T TIGR01517 185 VVGDIVSLSTGDVVPADGVFIS-GLSLEIDESSITGESDPIKKG--APKDSFLL----SGTVVNEGSGRMLVTAVGVNSF 257 (941)
T ss_pred CCCCEEEECCCCEecccEEEEE-cCcEEEEecccCCCCCccccc--CCCCceEE----eCCeEEeeEEEEEEEEeCCCcH
Confidence 3588999999999999999995 445557777777877544322 23333333 3456667764332222222232
Q ss_pred ecccchhHHHHhhcCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccccCCCCCCcchhHH
Q 001616 317 VGMNTAWGEMMSSISSDSNERTPLQARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFN 396 (1044)
Q Consensus 317 vG~~T~~gki~~~~~~~~~~~tplq~~l~~la~~i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (1044)
.|.= .+.+....+...-+..+.+..+.+......+++++.++.++.++.....+..... .... ..+..
T Consensus 258 ~gki---~~~~~~~~~~t~l~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~-~~~~--------~~~~~ 325 (941)
T TIGR01517 258 GGKL---MMELRAEGEDTPLQEKLSELAGLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGRDT-EEDA--------QTFLD 325 (941)
T ss_pred HHHH---HHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccc-chhh--------HHHHH
Confidence 2311 1122111122222233333334444333333333333332222222111110000 0000 01123
Q ss_pred HHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHh
Q 001616 397 AVVSIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKR 431 (1044)
Q Consensus 397 ~~~~~~~~ai~ilvvavP~gLplavtl~la~~~~~ 431 (1044)
.+...+..++..+..++|..+++++..+.....++
T Consensus 326 ~~~~al~llv~~iP~~Lp~~vti~l~~~~~~mak~ 360 (941)
T TIGR01517 326 HFIIAVTIVVVAVPEGLPLAVTIALAYSMKKMMKD 360 (941)
T ss_pred HHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHhC
Confidence 66677778888888889999999988887665543
No 185
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=58.38 E-value=15 Score=40.07 Aligned_cols=45 Identities=11% Similarity=0.067 Sum_probs=36.7
Q ss_pred ccCCCchhHHHHHHHHHhcCCEEEEEcC---CCHHHHHHHHHHcCCcc
Q 001616 662 IKDPCRPGVQKAVEACQSAGVEIKMITG---DNVFTAKAIATECGILR 706 (1044)
Q Consensus 662 i~D~lR~~v~~aI~~l~~aGI~v~mlTG---D~~~tA~aIA~~~GI~~ 706 (1044)
-.+.+=|++.++|+.|++.|++++++|| ..........+++|+..
T Consensus 14 ~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~ 61 (249)
T TIGR01457 14 KGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPA 61 (249)
T ss_pred cCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCC
Confidence 3455567999999999999999999996 66777777777888753
No 186
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=53.41 E-value=17 Score=35.43 Aligned_cols=33 Identities=18% Similarity=0.136 Sum_probs=29.5
Q ss_pred CCCchhHHHHHHHHHhcCCEEEEEcCCCHHHHH
Q 001616 664 DPCRPGVQKAVEACQSAGVEIKMITGDNVFTAK 696 (1044)
Q Consensus 664 D~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~ 696 (1044)
+++.+++.++++.+++.|+.++++||.+.....
T Consensus 23 ~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~ 55 (126)
T TIGR01689 23 VAPILAVIEKLRHYKALGFEIVISSSRNMRTYE 55 (126)
T ss_pred cccCHHHHHHHHHHHHCCCEEEEECCCCchhhh
Confidence 678999999999999999999999999876543
No 187
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=53.11 E-value=13 Score=37.79 Aligned_cols=84 Identities=12% Similarity=0.116 Sum_probs=52.0
Q ss_pred CCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCcccccccccceeecchhhhcCCHHHHHHHhccccEEeecC
Q 001616 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (1044)
Q Consensus 665 ~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~ar~s 744 (1044)
++.||+.++++ ++.++|.-+......+-+.+|+... ...++.+++.. ...
T Consensus 90 ~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~~l~~~-----fd~v~~~~~~~------------------~~K 139 (175)
T TIGR01493 90 PPWPDSAAALA-------RVAILSNASHWAFDQFAQQAGLPWY-----FDRAFSVDTVR------------------AYK 139 (175)
T ss_pred CCCCchHHHHH-------HHhhhhCCCHHHHHHHHHHCCCHHH-----HhhhccHhhcC------------------CCC
Confidence 57899999998 3678899888888888888887542 11223332211 122
Q ss_pred hhhH--HHHHHHHHhcCCEEEEEcCCcCCHHHHhhC
Q 001616 745 PFDK--LLMVQCLKKKGHVVAVTGDGTNDAPALKEA 778 (1044)
Q Consensus 745 P~~K--~~lV~~lq~~g~vVa~~GDG~NDapaLk~A 778 (1044)
|.-. ....+.+.-..+.+.|+||...|..+-++|
T Consensus 140 P~p~~f~~~~~~~~~~p~~~l~vgD~~~Di~~A~~~ 175 (175)
T TIGR01493 140 PDPVVYELVFDTVGLPPDRVLMVAAHQWDLIGARKF 175 (175)
T ss_pred CCHHHHHHHHHHHCCCHHHeEeEecChhhHHHHhcC
Confidence 3222 223333332335689999999998776543
No 188
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=52.10 E-value=1.9e+02 Score=30.56 Aligned_cols=18 Identities=11% Similarity=0.351 Sum_probs=10.6
Q ss_pred HHHHHHHHHHHHHHHHhh
Q 001616 1001 LACIAMAAFTWPIGWAVK 1018 (1044)
Q Consensus 1001 ~~~i~~~~~~~~~~~~~k 1018 (1044)
++.+++|++.+++.+..|
T Consensus 181 ~~~iiig~i~~~~~~~lk 198 (206)
T PF06570_consen 181 WVYIIIGVIAFALRFYLK 198 (206)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 345677777776654443
No 189
>PF00389 2-Hacid_dh: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; InterPro: IPR006139 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. The catalytic domain contains a number of conserved charged residues which may play a role in the catalytic mechanism. The NAD-binding domain is described in IPR006140 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 2DLD_A 2G76_B 3DC2_B 1YGY_B 3DDN_A 3KB6_B 3K5P_A 3EVT_A 1WWK_B 1GDH_A ....
Probab=52.06 E-value=2e+02 Score=27.78 Aligned_cols=78 Identities=17% Similarity=0.234 Sum_probs=43.4
Q ss_pred EEeecCh-hhHHHHHHHHHhcCCEEEEEcCCcC--CHHHHhhCCcceeeCCC-chHHHhhccCEEEccCChhHHHHHHHH
Q 001616 739 VMARSSP-FDKLLMVQCLKKKGHVVAVTGDGTN--DAPALKEADVGLSMGIQ-GTEVAKESSDIVILDDDFTSVATVLRW 814 (1044)
Q Consensus 739 V~ar~sP-~~K~~lV~~lq~~g~vVa~~GDG~N--DapaLk~AdVGiamg~~-gt~vAk~aaDivl~dd~f~~I~~~i~~ 814 (1044)
++++..+ -++ .+++.+. .=+.|...|-|.| |..++++-+|-++-... .++...|.+ +.+--..-+.
T Consensus 42 ii~~~~~~~~~-~~l~~~~-~Lk~I~~~~~G~d~id~~~a~~~gI~V~n~~g~~~~aVAE~a--------~~T~e~~~~~ 111 (133)
T PF00389_consen 42 IIVGSGTPLTA-EVLEAAP-NLKLISTAGAGVDNIDLEAAKERGIPVTNVPGYNAEAVAEHA--------GYTDEARERM 111 (133)
T ss_dssp EEESTTSTBSH-HHHHHHT-T-SEEEESSSSCTTB-HHHHHHTTSEEEE-TTTTHHHHHHHH--------TGBHHHHHHH
T ss_pred EEEcCCCCcCH-HHHhccc-eeEEEEEcccccCcccHHHHhhCeEEEEEeCCcCCcchhccc--------hhHHHHHHHH
Confidence 3444444 443 4445553 3357888999998 88899999988875421 122222322 3443444455
Q ss_pred hHHHHHhHHHHH
Q 001616 815 GRCVYTNIQKFI 826 (1044)
Q Consensus 815 GR~~~~ni~k~i 826 (1044)
++.+.+|+..++
T Consensus 112 ~~~~~~ni~~~l 123 (133)
T PF00389_consen 112 AEIAAENIERFL 123 (133)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 666666666554
No 190
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=49.83 E-value=46 Score=40.55 Aligned_cols=40 Identities=18% Similarity=0.302 Sum_probs=32.2
Q ss_pred CchhHHHHHHHHHhcCCEEEEEcCCCH------------HHHHHHHHHcCCc
Q 001616 666 CRPGVQKAVEACQSAGVEIKMITGDNV------------FTAKAIATECGIL 705 (1044)
Q Consensus 666 lR~~v~~aI~~l~~aGI~v~mlTGD~~------------~tA~aIA~~~GI~ 705 (1044)
+-|+++++++.|+++|+++.++|.-.. ..+.++.+++|+.
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgip 249 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGVP 249 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCCc
Confidence 469999999999999999999997544 3466677777764
No 191
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=49.71 E-value=71 Score=35.89 Aligned_cols=63 Identities=14% Similarity=0.294 Sum_probs=37.4
Q ss_pred EEeecChhhHHHHHHHHHh--cCCEEEEEc-CCcCCHH---HHhhCCcceeeCCCc---hHHHhhccCEEEc
Q 001616 739 VMARSSPFDKLLMVQCLKK--KGHVVAVTG-DGTNDAP---ALKEADVGLSMGIQG---TEVAKESSDIVIL 801 (1044)
Q Consensus 739 V~ar~sP~~K~~lV~~lq~--~g~vVa~~G-DG~NDap---aLk~AdVGiamg~~g---t~vAk~aaDivl~ 801 (1044)
-|.-|||.-=.++++...- .|..|+++| -|.-=.| .|.+++.-+.+-.+- .+.+...||+++.
T Consensus 136 ~~~PcTp~ai~~ll~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~~l~e~~~~ADIVIs 207 (296)
T PRK14188 136 ALVPCTPLGCMMLLRRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTRDLPAVCRRADILVA 207 (296)
T ss_pred CCcCCCHHHHHHHHHHhCCCCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCCCHHHHHhcCCEEEE
Confidence 4566777766666555432 389999999 4444444 466666666554211 2233456898885
No 192
>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A.
Probab=48.37 E-value=20 Score=34.22 Aligned_cols=40 Identities=23% Similarity=0.241 Sum_probs=31.1
Q ss_pred CchhHHHHHHHHHhcCCE-EEEEcCCCHHHHHHHHHHcCCc
Q 001616 666 CRPGVQKAVEACQSAGVE-IKMITGDNVFTAKAIATECGIL 705 (1044)
Q Consensus 666 lR~~v~~aI~~l~~aGI~-v~mlTGD~~~tA~aIA~~~GI~ 705 (1044)
..+.+.+.+++|.+.|++ +|+.+|.....+...|++.|+-
T Consensus 64 ~~~~~~~~v~~~~~~g~~~v~~~~g~~~~~~~~~a~~~gi~ 104 (116)
T PF13380_consen 64 PPDKVPEIVDEAAALGVKAVWLQPGAESEELIEAAREAGIR 104 (116)
T ss_dssp -HHHHHHHHHHHHHHT-SEEEE-TTS--HHHHHHHHHTT-E
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEcchHHHHHHHHHHHcCCE
Confidence 456789999999999997 9999999999999999998874
No 193
>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=46.43 E-value=88 Score=34.86 Aligned_cols=80 Identities=18% Similarity=0.319 Sum_probs=45.0
Q ss_pred EEeecChhhHHHHHHHHHh--cCCEEEEEcCCcC----CHHHHhhCCcceeeCCCchH---HHhhccCEEEcc---CChh
Q 001616 739 VMARSSPFDKLLMVQCLKK--KGHVVAVTGDGTN----DAPALKEADVGLSMGIQGTE---VAKESSDIVILD---DDFT 806 (1044)
Q Consensus 739 V~ar~sP~~K~~lV~~lq~--~g~vVa~~GDG~N----DapaLk~AdVGiamg~~gt~---vAk~aaDivl~d---d~f~ 806 (1044)
-|.-|||.-=.++++...- .|+.|+++|.+.. =+.+|...+.-+.+-.+-|. ..-..|||++.- .+|-
T Consensus 134 ~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVtichs~T~~l~~~~~~ADIvI~AvG~p~~i 213 (282)
T PRK14169 134 TVVASTPYGIMALLDAYDIDVAGKRVVIVGRSNIVGRPLAGLMVNHDATVTIAHSKTRNLKQLTKEADILVVAVGVPHFI 213 (282)
T ss_pred CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEECCCCCCHHHHHhhCCEEEEccCCcCcc
Confidence 3566777766666666542 3899999998744 13345544444444323332 234678988863 2332
Q ss_pred HHHHHHHHhHHHH
Q 001616 807 SVATVLRWGRCVY 819 (1044)
Q Consensus 807 ~I~~~i~~GR~~~ 819 (1044)
. .+.++.|.-+.
T Consensus 214 ~-~~~vk~GavVI 225 (282)
T PRK14169 214 G-ADAVKPGAVVI 225 (282)
T ss_pred C-HHHcCCCcEEE
Confidence 2 33466665443
No 194
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=45.57 E-value=75 Score=30.51 Aligned_cols=83 Identities=12% Similarity=0.177 Sum_probs=56.2
Q ss_pred HHHHhcccceeeeeeeecCchhhcccchHHHhhhhcccCeEEEEEecccCCCchhHHHHHHHHHhcCC-E-EEEEcCCCH
Q 001616 615 HGMAASSLRCIAFAYKQVSEEETAYNNDVKARQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGV-E-IKMITGDNV 692 (1044)
Q Consensus 615 ~~~a~~glR~l~~A~k~l~~~~~~~~~~~~~~~~~~e~~l~llG~vgi~D~lR~~v~~aI~~l~~aGI-~-v~mlTGD~~ 692 (1044)
.-+...|++|+.+.-. .+.++ ......+.+-.++++-.......+.+++.++.|+++|. + .+++-|...
T Consensus 21 ~~l~~~G~~vi~lG~~-vp~e~--------~~~~a~~~~~d~V~iS~~~~~~~~~~~~~~~~L~~~~~~~i~i~~GG~~~ 91 (122)
T cd02071 21 RALRDAGFEVIYTGLR-QTPEE--------IVEAAIQEDVDVIGLSSLSGGHMTLFPEVIELLRELGAGDILVVGGGIIP 91 (122)
T ss_pred HHHHHCCCEEEECCCC-CCHHH--------HHHHHHHcCCCEEEEcccchhhHHHHHHHHHHHHhcCCCCCEEEEECCCC
Confidence 3467788888887753 22110 11222345667888888888999999999999999977 4 456666655
Q ss_pred HHHHHHHHHcCCcc
Q 001616 693 FTAKAIATECGILR 706 (1044)
Q Consensus 693 ~tA~aIA~~~GI~~ 706 (1044)
..-.+-.++.|+..
T Consensus 92 ~~~~~~~~~~G~d~ 105 (122)
T cd02071 92 PEDYELLKEMGVAE 105 (122)
T ss_pred HHHHHHHHHCCCCE
Confidence 44456677899754
No 195
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=45.49 E-value=8.1e+02 Score=32.33 Aligned_cols=204 Identities=18% Similarity=0.160 Sum_probs=109.1
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHhhcc-----cCCceEEE----EeCCeEEEEeecccccCcEEEeCCCCeeeccEEEE
Q 001616 200 FVAVFLVIVVSAFSNFRQARQFDKLSKI-----SNNIKVEV----VREARRLQISIFDLVVGDIVFLKIGDQIPADGLFL 270 (1044)
Q Consensus 200 ~~~v~lv~~v~a~~~~~~~~~~~~l~~~-----~~~~~v~V----iR~G~~~~I~~~dLvvGDIV~l~~Gd~VPADgill 270 (1044)
++...++.++.-++..+.-++++++... .+...+++ ++-|....+...|.+|-|...|+..+ .=+|=-.+
T Consensus 113 i~~n~~~g~~qe~~a~~~l~~lk~~~~~~~~V~R~g~~~~i~a~eLVpGDiV~l~~gd~vPAD~rLl~~~~-l~VdEs~L 191 (917)
T COG0474 113 VVINALLGFVQEYRAEKALEALKKMSSPKAKVLRDGKFVEIPASELVPGDIVLLEAGDVVPADLRLLESSD-LEVDESAL 191 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEeCCcEEEecHHHCCCCcEEEECCCCccccceEEEEecC-ceEEcccc
Confidence 3334445577777877776666666322 22223333 23578888999999999999998877 45566666
Q ss_pred ecCceeeecCCC--CCCCCcee--ecC--CCCceeeecceEeeCceEEEEEEecccchhHHHHhhc-CCCCCCCChhHHH
Q 001616 271 DGHSLQVDESSM--TGESDHVE--VDS--TNNPFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSSI-SSDSNERTPLQAR 343 (1044)
Q Consensus 271 ~g~~l~VDES~L--TGEs~pv~--k~~--~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~gki~~~~-~~~~~~~tplq~~ 343 (1044)
.|++.-|+=-+. ++|..|.. +.. -.+..+.+|+-..--...+.-|..|..+ +.+... .....-.-.+.+.
T Consensus 192 TGES~pv~K~~~~~~~~~~~~~~d~~n~l~sGt~V~~G~~~giVvaTG~~T~~G~ia---~~~~~~~~~~t~l~~~l~~~ 268 (917)
T COG0474 192 TGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIA---RLLPTKKEVKTPLQRKLNKL 268 (917)
T ss_pred cCCCcchhccccccccccccccCCccceEEeCCEEEcceEEEEEEEEcCccHHHHHH---HhhccccccCCcHHHHHHHH
Confidence 776643322211 21222222 110 1466777777444444445556666555 333333 2222222233333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccccCCCCCCcchhHHHHHHHHHHHHHHHHHHhcchhHHHHHH
Q 001616 344 LDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAAAVTIVVVAIPEGLPLAVTL 423 (1044)
Q Consensus 344 l~~la~~i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~ilvvavP~gLplavtl 423 (1044)
...+.......++++.++.+...-..+.. .++..+..+++++..+.|.-+-++..+
T Consensus 269 ~~~l~~~~l~~~~~~~~~~~~~~~~~~~~------------------------~~~~~v~l~va~IPegLp~~vti~la~ 324 (917)
T COG0474 269 GKFLLVLALVLGALVFVVGLFRGGNGLLE------------------------SFLTALALAVAAVPEGLPAVVTIALAL 324 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCccHHH------------------------HHHHHHHHHHhccccchHHHHHHHHHH
Confidence 33443333333333333333320110111 455567778888888888888888888
Q ss_pred HHHHHHHh
Q 001616 424 TLAYSMKR 431 (1044)
Q Consensus 424 ~la~~~~~ 431 (1044)
+...-.++
T Consensus 325 g~~~mak~ 332 (917)
T COG0474 325 GAQRMAKD 332 (917)
T ss_pred HHHHHHhc
Confidence 77754443
No 196
>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=44.13 E-value=85 Score=35.00 Aligned_cols=81 Identities=14% Similarity=0.254 Sum_probs=42.6
Q ss_pred EEeecChhhHHHHHHHHHh--cCCEEEEEcCCcC----CHHHHhhCCcceeeCCCchH-H--HhhccCEEEccCChhHH-
Q 001616 739 VMARSSPFDKLLMVQCLKK--KGHVVAVTGDGTN----DAPALKEADVGLSMGIQGTE-V--AKESSDIVILDDDFTSV- 808 (1044)
Q Consensus 739 V~ar~sP~~K~~lV~~lq~--~g~vVa~~GDG~N----DapaLk~AdVGiamg~~gt~-v--Ak~aaDivl~dd~f~~I- 808 (1044)
-|.-|||.-=.++++...- .|+.|.++|-+.. =+.+|...+--+..--+.|. . .-..|||++.--.=..+
T Consensus 135 ~~~PcTp~avi~lL~~~~i~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVtichs~T~~l~~~~~~ADIvI~AvG~~~~i 214 (284)
T PRK14170 135 SFVPCTPAGIIELIKSTGTQIEGKRAVVIGRSNIVGKPVAQLLLNENATVTIAHSRTKDLPQVAKEADILVVATGLAKFV 214 (284)
T ss_pred CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEecCCcCcc
Confidence 3556777666666555432 3899999998744 12345444433333223332 2 33568988864222222
Q ss_pred -HHHHHHhHHHH
Q 001616 809 -ATVLRWGRCVY 819 (1044)
Q Consensus 809 -~~~i~~GR~~~ 819 (1044)
.+.++.|.-+.
T Consensus 215 ~~~~vk~GavVI 226 (284)
T PRK14170 215 KKDYIKPGAIVI 226 (284)
T ss_pred CHHHcCCCCEEE
Confidence 23466665443
No 197
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=43.86 E-value=1.1e+02 Score=30.07 Aligned_cols=81 Identities=11% Similarity=0.125 Sum_probs=53.0
Q ss_pred HHHhcccceeeeeeeecCchhhcccchHHHhhhhcccCeEEEEEecccCCCchhHHHHHHHHHhcCC--EEEEEcCCC--
Q 001616 616 GMAASSLRCIAFAYKQVSEEETAYNNDVKARQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGV--EIKMITGDN-- 691 (1044)
Q Consensus 616 ~~a~~glR~l~~A~k~l~~~~~~~~~~~~~~~~~~e~~l~llG~vgi~D~lR~~v~~aI~~l~~aGI--~v~mlTGD~-- 691 (1044)
.+...|++|+-+....-+++ --+...+.+-.++|+-++-=.--+..++.++.|+++|+ .++|+-|--
T Consensus 24 ~l~~~GfeVi~LG~~v~~e~---------~v~aa~~~~adiVglS~l~~~~~~~~~~~~~~l~~~gl~~~~vivGG~~vi 94 (134)
T TIGR01501 24 AFTNAGFNVVNLGVLSPQEE---------FIKAAIETKADAILVSSLYGHGEIDCKGLRQKCDEAGLEGILLYVGGNLVV 94 (134)
T ss_pred HHHHCCCEEEECCCCCCHHH---------HHHHHHHcCCCEEEEecccccCHHHHHHHHHHHHHCCCCCCEEEecCCcCc
Confidence 45668999988876433211 11222345667888888877778889999999999997 356677631
Q ss_pred ----HHHHHHHHHHcCCc
Q 001616 692 ----VFTAKAIATECGIL 705 (1044)
Q Consensus 692 ----~~tA~aIA~~~GI~ 705 (1044)
...-+.-++++|+.
T Consensus 95 ~~~d~~~~~~~l~~~Gv~ 112 (134)
T TIGR01501 95 GKQDFPDVEKRFKEMGFD 112 (134)
T ss_pred ChhhhHHHHHHHHHcCCC
Confidence 11224557889964
No 198
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=42.84 E-value=88 Score=34.08 Aligned_cols=134 Identities=20% Similarity=0.320 Sum_probs=67.2
Q ss_pred CCCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCccccccc-------ccceee---cchhhhcCCHHHHHHH
Q 001616 664 DPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQV-------EKGEVV---EGVEFRNYTDEERIQK 733 (1044)
Q Consensus 664 D~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~~~~~~-------~~~~vi---~g~~~~~~~~~~~~~~ 733 (1044)
-.+|+|+.+.++.|++.+|.+.++|+-=-....++-++-|...++..+ +..-.+ .|+-+...+..+-
T Consensus 89 i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~~~~Nv~VvSN~M~Fd~~g~l~gF~~~lIH~~NKn~~--- 165 (246)
T PF05822_consen 89 IMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGVFHPNVKVVSNFMDFDEDGVLVGFKGPLIHTFNKNES--- 165 (246)
T ss_dssp --B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT--BTTEEEEEE-EEE-TTSBEEEE-SS---TT-HHHH---
T ss_pred hhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCCCCCCeEEEeeeEEECCcceEeecCCCceEEeeCCcc---
Confidence 357999999999999999999999987777777777777877654221 000111 1111111111100
Q ss_pred hccccEEeecChhhHHHHHHHHHhcCCEEEEEcCCcCCHHHHhhC---CcceeeCC--CchH----HHhhccCEEEccCC
Q 001616 734 VDKIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEA---DVGLSMGI--QGTE----VAKESSDIVILDDD 804 (1044)
Q Consensus 734 ~~~~~V~ar~sP~~K~~lV~~lq~~g~vVa~~GDG~NDapaLk~A---dVGiamg~--~gt~----vAk~aaDivl~dd~ 804 (1044)
+. +.+| .-+.++ ....|...||..-|+.|-.-. +.-+.+|- ...| .=+++=||||.+|.
T Consensus 166 -----~l-~~~~-----~~~~~~-~R~NvlLlGDslgD~~Ma~G~~~~~~~lkIGFLn~~ve~~l~~Y~~~yDIVlv~D~ 233 (246)
T PF05822_consen 166 -----AL-EDSP-----YFKQLK-KRTNVLLLGDSLGDLHMADGVPDEENVLKIGFLNDKVEENLEKYLEAYDIVLVDDQ 233 (246)
T ss_dssp -----HH-TTHH-----HHHCTT-T--EEEEEESSSGGGGTTTT-S--SEEEEEEEE-SSHHHHHHHHHCCSSEEEET--
T ss_pred -----cc-cCch-----HHHHhc-cCCcEEEecCccCChHhhcCCCccccEEEEEecccCHHHHHHHHHhcCCEEEECCC
Confidence 00 0001 111222 245688999999999986544 33333331 1122 34578899999886
Q ss_pred hhHHHHHH
Q 001616 805 FTSVATVL 812 (1044)
Q Consensus 805 f~~I~~~i 812 (1044)
=-.++..|
T Consensus 234 tm~v~~~i 241 (246)
T PF05822_consen 234 TMDVPNAI 241 (246)
T ss_dssp B-HHHHHH
T ss_pred CchHHHHH
Confidence 54455443
No 199
>COG1916 Uncharacterized homolog of PrgY (pheromone shutdown protein) [Function unknown]
Probab=42.66 E-value=1.9e+02 Score=33.11 Aligned_cols=103 Identities=19% Similarity=0.248 Sum_probs=61.2
Q ss_pred CCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCcccccc---cccceeecc---hhhhcCCHHHHHHHhcccc
Q 001616 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQ---VEKGEVVEG---VEFRNYTDEERIQKVDKIR 738 (1044)
Q Consensus 665 ~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~~~~~---~~~~~vi~g---~~~~~~~~~~~~~~~~~~~ 738 (1044)
+|=.|++.||+..++.|+.|.++--|=..|-+..-.++++...-.- .-.+....| .+.+.+++++.... -..
T Consensus 96 ~PGsEmk~AIe~A~e~ga~V~lIDRdI~vTl~R~~~~~~~~EKlK~~~~L~~~~~~~g~~e~ei~~l~~~D~~~a--l~~ 173 (388)
T COG1916 96 KPGSEMKAAIEAARELGAPVALIDRDIGVTLRRAWAKMPFWEKLKLISSLISGLLFPGQSEIEIDELKQEDVLSA--LMQ 173 (388)
T ss_pred CChHHHHHHHHHHHHcCCCEEEecccHHHHHHHHHHhCCHHHHHHHHHHHHHhcccCCCchHHHHHHhhhhHHHH--HHH
Confidence 3557889999999999999999999988888877776665431100 000123334 23334433332221 111
Q ss_pred EEeecChhhHHHHHHH------------HHhcCCEEEEEcCCc
Q 001616 739 VMARSSPFDKLLMVQC------------LKKKGHVVAVTGDGT 769 (1044)
Q Consensus 739 V~ar~sP~~K~~lV~~------------lq~~g~vVa~~GDG~ 769 (1044)
-|.|-+|.-+.-+|.. ......+||++|-|-
T Consensus 174 efr~~~P~~~~vLIDERd~ymA~nll~~~~~~~~vvAVVGAGH 216 (388)
T COG1916 174 EFRRFSPTVYKVLIDERDRYMARNLLEIVSILNDVVAVVGAGH 216 (388)
T ss_pred HHHHhChhHHHHHHHHHHHHHHHHHHHHHcccCcEEEEEcccc
Confidence 3556777766555432 222245899999873
No 200
>PRK14174 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=42.56 E-value=99 Score=34.75 Aligned_cols=64 Identities=17% Similarity=0.230 Sum_probs=38.5
Q ss_pred EEeecChhhHHHHHHHHHh--cCCEEEEEcCCcCC----HHHHh------hCCcceeeCCCc-hHHHhhccCEEEcc
Q 001616 739 VMARSSPFDKLLMVQCLKK--KGHVVAVTGDGTND----APALK------EADVGLSMGIQG-TEVAKESSDIVILD 802 (1044)
Q Consensus 739 V~ar~sP~~K~~lV~~lq~--~g~vVa~~GDG~ND----apaLk------~AdVGiamg~~g-t~vAk~aaDivl~d 802 (1044)
-|.-|||.-=.++++...- .|+.|+++|.+..= +.+|. .|.|-++..... .+..-..||+++.-
T Consensus 137 ~~~PcTp~ail~ll~~y~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~~~~~atVt~~hs~t~~l~~~~~~ADIvI~A 213 (295)
T PRK14174 137 CFVSCTPYGILELLGRYNIETKGKHCVVVGRSNIVGKPMANLMLQKLKESNCTVTICHSATKDIPSYTRQADILIAA 213 (295)
T ss_pred CcCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHhccccCCCEEEEEeCCchhHHHHHHhCCEEEEe
Confidence 3556788766666655542 38999999998541 22343 356666554221 12345789999864
No 201
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=41.15 E-value=2.7e+02 Score=35.84 Aligned_cols=101 Identities=15% Similarity=0.196 Sum_probs=55.7
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHhhcccCCceEEEEeCCeEEEEeecccccCcEEEeCCCCeeeccEEEEec-Cceeee
Q 001616 200 FVAVFLVIVVSAFSNFRQARQFDKLSKISNNIKVEVVREARRLQISIFDLVVGDIVFLKIGDQIPADGLFLDG-HSLQVD 278 (1044)
Q Consensus 200 ~~~v~lv~~v~a~~~~~~~~~~~~l~~~~~~~~v~ViR~G~~~~I~~~dLvvGDIV~l~~Gd~VPADgill~g-~~l~VD 278 (1044)
.+.+++++++++.-+|.++++.++..+...+... ....+ +.-|....+...|.+|-|.+++.. +.+-+|
T Consensus 58 ~~~i~~~~~i~~~i~~~qe~~a~~~~~~L~~~~~------~~~~V----~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaD 127 (755)
T TIGR01647 58 FVIILGLLLLNATIGFIEENKAGNAVEALKQSLA------PKARV----LRDGKWQEIPASELVPGDVVRLKIGDIVPAD 127 (755)
T ss_pred hhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCC------CeEEE----EECCEEEEEEhhhCcCCCEEEECCCCEEece
Confidence 3445556666777777777665554333333211 11111 234888899999999999999974 444455
Q ss_pred cCCCCCCCCceeecC---CCCce-eeecceEeeCce
Q 001616 279 ESSMTGESDHVEVDS---TNNPF-LFSGSKVADGYA 310 (1044)
Q Consensus 279 ES~LTGEs~pv~k~~---~~~~~-l~sGt~v~~G~~ 310 (1044)
=-.+.|+.--+.-.. +..|. -..|..+..|..
T Consensus 128 g~vi~g~~~~VDeS~LTGES~PV~K~~~~~v~aGT~ 163 (755)
T TIGR01647 128 CRLFEGDYIQVDQAALTGESLPVTKKTGDIAYSGST 163 (755)
T ss_pred EEEEecCceEEEcccccCCccceEeccCCeeeccCE
Confidence 555555532222111 11222 235666666654
No 202
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=39.92 E-value=87 Score=33.71 Aligned_cols=63 Identities=19% Similarity=0.222 Sum_probs=31.5
Q ss_pred EEeecChhhHHHHHHHHHhc-C------CEEEEEcCCcCCHHHHhhC------CcceeeCCCchHHHhhccCEEEc
Q 001616 739 VMARSSPFDKLLMVQCLKKK-G------HVVAVTGDGTNDAPALKEA------DVGLSMGIQGTEVAKESSDIVIL 801 (1044)
Q Consensus 739 V~ar~sP~~K~~lV~~lq~~-g------~vVa~~GDG~NDapaLk~A------dVGiamg~~gt~vAk~aaDivl~ 801 (1044)
|-.|..-..|...|+.+-+. + ..+.++||...|-.|++.. ++++.+|....-.-.-+|++-+.
T Consensus 157 vEvrp~~~~KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~~~~~~~i~V~~~~~~~~~t~A~y~l~ 232 (235)
T PF02358_consen 157 VEVRPPGVNKGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRALRELEEGGFGIKVGSVSVGEKPTAASYRLD 232 (235)
T ss_dssp EEEE-TT--HHHHHHHHHTTS---------EEEEESSHHHHHHHHTTTTS----EEEEES----------------
T ss_pred EEEEeCCCChHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHHHHhcccCCCCeEEEeecccccccccccccc
Confidence 44455555699999888765 3 2689999999999998763 66777773221122344555544
No 203
>COG3329 Predicted permease [General function prediction only]
Probab=39.14 E-value=1.3e+02 Score=33.47 Aligned_cols=81 Identities=14% Similarity=0.208 Sum_probs=46.6
Q ss_pred HHHHHHHhhcCCCcCCCCCCCcHHHHHHHHhhhhHHHHHHHHHHHHHhhccccCCCCccccchh--HHHHHHHHHHHHhH
Q 001616 134 EDVSRRSQLFGANTYHKPPPKGLLHFVLEAFKDTTILILLVCAALSLGFGIKEHGAEEGWYEGG--SIFVAVFLVIVVSA 211 (1044)
Q Consensus 134 ~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~illv~a~lsl~~gi~~~g~~~~~~d~~--~i~~~v~lv~~v~a 211 (1044)
+|....|+.|-+-.-++...-..|+++.|.|.++.+..++...++-++.|-..+..-+.++++. ..+..+++..-+++
T Consensus 185 ~d~~ssr~~~~~~~~~ed~~v~~~ell~Esflnpal~lllggl~iGlitGe~g~~vl~~F~~~lFqGvL~lflL~MGm~A 264 (372)
T COG3329 185 TDLASSRQEYLSPQWGEDNRVKIWELLQESFLNPALVLLLGGLAIGLITGEQGESVLKPFFDPLFQGVLCLFLLDMGMTA 264 (372)
T ss_pred hhhhhhhhhhcccccCcccchhhHHHHHHHHcCchHHHHHHHHHHhheeccCchhhhhhhhHHHHHHHHHHHHHHHhHHH
Confidence 3455555555554444444456899999999999998888777666666543322223445443 22333334444444
Q ss_pred HHH
Q 001616 212 FSN 214 (1044)
Q Consensus 212 ~~~ 214 (1044)
.++
T Consensus 265 ~rr 267 (372)
T COG3329 265 GRR 267 (372)
T ss_pred HHH
Confidence 443
No 204
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=39.10 E-value=73 Score=36.59 Aligned_cols=105 Identities=19% Similarity=0.149 Sum_probs=65.0
Q ss_pred chhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHc-C-------Ccccccccccceeec----------chhhhcCCHH
Q 001616 667 RPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATEC-G-------ILRLDQQVEKGEVVE----------GVEFRNYTDE 728 (1044)
Q Consensus 667 R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~-G-------I~~~~~~~~~~~vi~----------g~~~~~~~~~ 728 (1044)
-|++++.++.|+++|+++.++|+-....+..+.+.+ | +..- ...++. +..|+....+
T Consensus 186 ~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g~~~~~~~w~~y-----FD~IIt~a~KP~FF~~~~pf~~v~~~ 260 (343)
T TIGR02244 186 DPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLGPFLGEHDWRDY-----FDVVIVDARKPGFFTEGRPFRQVDVE 260 (343)
T ss_pred chhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhCCcccccchHhh-----CcEEEeCCCCCcccCCCCceEEEeCC
Confidence 489999999999999999999999999999999996 6 3321 122222 2223322211
Q ss_pred HHHHH------hccccEEeecChhhHHHHHHHHHhcCCEEEEEcCCc-CCHHHHh-hCC
Q 001616 729 ERIQK------VDKIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGT-NDAPALK-EAD 779 (1044)
Q Consensus 729 ~~~~~------~~~~~V~ar~sP~~K~~lV~~lq~~g~vVa~~GDG~-NDapaLk-~Ad 779 (1044)
.-... +.+-.|++.=+- ..+-+.+.-.+..|+++||.. .|.-.-+ .++
T Consensus 261 ~g~~~~~~~~~l~~g~vY~gGn~---~~~~~~l~~~~~~vlYvGD~i~~Di~~~kk~~G 316 (343)
T TIGR02244 261 TGSLKWGEVDGLEPGKVYSGGSL---KQFHELLKWRGKEVLYFGDHIYGDLLRSKKKRG 316 (343)
T ss_pred CCcccCCccccccCCCeEeCCCH---HHHHHHHCCCCCcEEEECCcchHHHHhhHHhcC
Confidence 00000 122234443332 234455566789999999975 4776555 443
No 205
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=38.70 E-value=8.2e+02 Score=32.11 Aligned_cols=197 Identities=15% Similarity=0.101 Sum_probs=94.9
Q ss_pred HHHHHhHHHHHHHHHHHHHhhcc----cCCceEEEE-----eCCeEEEEeecccccCcEEEeCCCCeeeccEEEEecCce
Q 001616 205 LVIVVSAFSNFRQARQFDKLSKI----SNNIKVEVV-----REARRLQISIFDLVVGDIVFLKIGDQIPADGLFLDGHSL 275 (1044)
Q Consensus 205 lv~~v~a~~~~~~~~~~~~l~~~----~~~~~v~Vi-----R~G~~~~I~~~dLvvGDIV~l~~Gd~VPADgill~g~~l 275 (1044)
++.++.-.+..+.-+++.++... ..+.+.+.+ .-|....+..-|.+|-|.+.++.. ..=+|=-.+.|++.
T Consensus 95 ~i~~~qe~~a~~~l~~L~~l~~~~~~ViRdg~~~~I~~~eLv~GDiv~l~~Gd~IPaDg~ii~g~-~l~VDES~LTGES~ 173 (884)
T TIGR01522 95 TVGFVQEYRSEKSLEALNKLVPPECHLIREGKLEHVLASTLVPGDLVCLSVGDRVPADLRIVEAV-DLSIDESNLTGETT 173 (884)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCccCCEEEecCCCEEeeeEEEEEcC-ceEEEcccccCCCc
Confidence 44444555555666666665221 112222222 247888888889999998888743 33466667777764
Q ss_pred eeecCCC--CCCC--CceeecC--CCCceeeecceEeeCceEEEEEEecccchhHHHHhhcCCCCCC-CChhHHHHHHHH
Q 001616 276 QVDESSM--TGES--DHVEVDS--TNNPFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSSISSDSNE-RTPLQARLDKLT 348 (1044)
Q Consensus 276 ~VDES~L--TGEs--~pv~k~~--~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~gki~~~~~~~~~~-~tplq~~l~~la 348 (1044)
-|+=..- .++. .+.++.. -.+..+.+|+-..--...+.=+..|. +.+++....+.+.. ...+.+....+.
T Consensus 174 pv~K~~~~~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~gk---i~~~v~~~~~~kt~lq~~l~~l~~~~~ 250 (884)
T TIGR01522 174 PVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGA---VFKMMQAIEKPKTPLQKSMDLLGKQLS 250 (884)
T ss_pred ceecccccccccccccccccCceEEeCCEEEeeeEEEEEEEecCccHHHH---HHHHhccCCCCCCcHHHHHHHHHHHHH
Confidence 3332221 1111 0111110 13556777764433222333344442 22444333333222 223333334443
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccccCCCCCCcchhHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHH
Q 001616 349 STIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAAAVTIVVVAIPEGLPLAVTLTLAYS 428 (1044)
Q Consensus 349 ~~i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~ilvvavP~gLplavtl~la~~ 428 (1044)
.....++.++.++.++.- ..+. . .+...+..++..+..+.|..+++++..+....
T Consensus 251 ~~~~~~~~~~~~~~~~~~-~~~~-~-----------------------~~~~~v~llv~aiP~~Lp~~vt~~l~~~~~r~ 305 (884)
T TIGR01522 251 LVSFGVIGVICLVGWFQG-KDWL-E-----------------------MFTISVSLAVAAIPEGLPIIVTVTLALGVLRM 305 (884)
T ss_pred HHHHHHHHHHHHHHHHhc-CCHH-H-----------------------HHHHHHHHHHHHccchHHHHHHHHHHHHHHHH
Confidence 332222222333333221 1111 1 23334556677778888888888888887655
Q ss_pred HH
Q 001616 429 MK 430 (1044)
Q Consensus 429 ~~ 430 (1044)
.+
T Consensus 306 ak 307 (884)
T TIGR01522 306 SK 307 (884)
T ss_pred hh
Confidence 44
No 206
>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=38.48 E-value=1.3e+02 Score=33.61 Aligned_cols=79 Identities=20% Similarity=0.255 Sum_probs=43.8
Q ss_pred cEEeecChhhHHHHHHHHHh--cCCEEEEEcCCcC----CHHHHhh--CCcceeeCCCchH---HHhhccCEEEccC---
Q 001616 738 RVMARSSPFDKLLMVQCLKK--KGHVVAVTGDGTN----DAPALKE--ADVGLSMGIQGTE---VAKESSDIVILDD--- 803 (1044)
Q Consensus 738 ~V~ar~sP~~K~~lV~~lq~--~g~vVa~~GDG~N----DapaLk~--AdVGiamg~~gt~---vAk~aaDivl~dd--- 803 (1044)
.-|.-|||.-=.++++...- .|+.|+++|-+.- =+.+|.. |.|-++- +.|. ..-..|||++.--
T Consensus 135 ~~~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~atVt~ch--s~t~~l~~~~~~ADIvI~AvG~p 212 (284)
T PRK14190 135 DTFLPCTPHGILELLKEYNIDISGKHVVVVGRSNIVGKPVGQLLLNENATVTYCH--SKTKNLAELTKQADILIVAVGKP 212 (284)
T ss_pred CCCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEe--CCchhHHHHHHhCCEEEEecCCC
Confidence 34667888776666666542 3889999998743 1234443 4444443 3332 2346788888532
Q ss_pred ChhHHHHHHHHhHHHH
Q 001616 804 DFTSVATVLRWGRCVY 819 (1044)
Q Consensus 804 ~f~~I~~~i~~GR~~~ 819 (1044)
+|-. .+.++.|.-+.
T Consensus 213 ~~i~-~~~ik~gavVI 227 (284)
T PRK14190 213 KLIT-ADMVKEGAVVI 227 (284)
T ss_pred CcCC-HHHcCCCCEEE
Confidence 2211 33355555443
No 207
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=36.84 E-value=1.5e+02 Score=33.25 Aligned_cols=63 Identities=17% Similarity=0.240 Sum_probs=38.1
Q ss_pred EEeecChhhHHHHHHHHHh--cCCEEEEEcCCcC----CHHHHhh--CCcceeeCCCchHH--HhhccCEEEcc
Q 001616 739 VMARSSPFDKLLMVQCLKK--KGHVVAVTGDGTN----DAPALKE--ADVGLSMGIQGTEV--AKESSDIVILD 802 (1044)
Q Consensus 739 V~ar~sP~~K~~lV~~lq~--~g~vVa~~GDG~N----DapaLk~--AdVGiamg~~gt~v--Ak~aaDivl~d 802 (1044)
-|.-|||.-=.++++..+- .|..|+++|.|.. =+.+|.. |.|-++-. ...+. .-..|||++.-
T Consensus 135 ~~~PcTp~avi~lL~~~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs-~t~~l~~~~~~ADIvV~A 207 (285)
T PRK14191 135 GFVPATPMGVMRLLKHYHIEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHI-LTKDLSFYTQNADIVCVG 207 (285)
T ss_pred CCCCCcHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeC-CcHHHHHHHHhCCEEEEe
Confidence 4566888777777666543 3899999999832 1234433 55555433 22222 34679998864
No 208
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=36.71 E-value=40 Score=37.34 Aligned_cols=45 Identities=18% Similarity=0.351 Sum_probs=39.1
Q ss_pred EEecccCCCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHc
Q 001616 658 GIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATEC 702 (1044)
Q Consensus 658 G~vgi~D~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~ 702 (1044)
|.+.--..+=||+.++|+.|+++|++++.+|--...+....++++
T Consensus 17 Gvl~~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L 61 (269)
T COG0647 17 GVLYRGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARL 61 (269)
T ss_pred CceEeCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHH
Confidence 666667788899999999999999999999999998888666654
No 209
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=36.69 E-value=2.8e+02 Score=30.99 Aligned_cols=64 Identities=19% Similarity=0.309 Sum_probs=37.7
Q ss_pred EEeecChhhHHHHHHHHHh--cCCEEEEEcCCcC-C---HHHHhhCCcceeeCCCchH---HHhhccCEEEcc
Q 001616 739 VMARSSPFDKLLMVQCLKK--KGHVVAVTGDGTN-D---APALKEADVGLSMGIQGTE---VAKESSDIVILD 802 (1044)
Q Consensus 739 V~ar~sP~~K~~lV~~lq~--~g~vVa~~GDG~N-D---apaLk~AdVGiamg~~gt~---vAk~aaDivl~d 802 (1044)
.|.-|||.-=.++++..+- .|..|+++|-|.- = +.+|...+.-+.+-.+.|. ..-..|||++.-
T Consensus 136 ~~~PcTp~aii~lL~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t~~l~~~~~~ADIVV~a 208 (285)
T PRK14189 136 LFRPCTPYGVMKMLESIGIPLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKTRDLAAHTRQADIVVAA 208 (285)
T ss_pred CCcCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCCCCHHHHhhhCCEEEEc
Confidence 4666777666555555432 3889999998855 2 3345555544443323332 234678988863
No 210
>PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=36.52 E-value=1.5e+02 Score=33.16 Aligned_cols=79 Identities=18% Similarity=0.189 Sum_probs=40.8
Q ss_pred EeecChhhHHHHHHHHH--hcCCEEEEEcCCcC----CHHHHhhCCcceeeCCCchH-H--HhhccCEEEccCChhHH--
Q 001616 740 MARSSPFDKLLMVQCLK--KKGHVVAVTGDGTN----DAPALKEADVGLSMGIQGTE-V--AKESSDIVILDDDFTSV-- 808 (1044)
Q Consensus 740 ~ar~sP~~K~~lV~~lq--~~g~vVa~~GDG~N----DapaLk~AdVGiamg~~gt~-v--Ak~aaDivl~dd~f~~I-- 808 (1044)
+.-|||.-=.++++..+ -.|..|+++|.+.. =+-+|...+--+.+-.+.|. . .-..|||++.--.-..+
T Consensus 136 ~~PcTp~avi~ll~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~AtVtichs~T~nl~~~~~~ADIvI~AvGk~~~i~ 215 (282)
T PRK14182 136 PRPCTPAGVMRMLDEARVDPKGKRALVVGRSNIVGKPMAMMLLERHATVTIAHSRTADLAGEVGRADILVAAIGKAELVK 215 (282)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEecCCcCccC
Confidence 45667766555555543 23889999998744 13345433333333223332 2 23468888863221211
Q ss_pred HHHHHHhHHH
Q 001616 809 ATVLRWGRCV 818 (1044)
Q Consensus 809 ~~~i~~GR~~ 818 (1044)
.+.+++|.-+
T Consensus 216 ~~~ik~gaiV 225 (282)
T PRK14182 216 GAWVKEGAVV 225 (282)
T ss_pred HHHcCCCCEE
Confidence 3335555544
No 211
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=36.41 E-value=4.9e+02 Score=29.17 Aligned_cols=63 Identities=19% Similarity=0.305 Sum_probs=39.3
Q ss_pred EEeecChhhHHHHHHHHHh--cCCEEEEEcC-CcCCHH---HHhhCCcceeeCCCchH---HHhhccCEEEc
Q 001616 739 VMARSSPFDKLLMVQCLKK--KGHVVAVTGD-GTNDAP---ALKEADVGLSMGIQGTE---VAKESSDIVIL 801 (1044)
Q Consensus 739 V~ar~sP~~K~~lV~~lq~--~g~vVa~~GD-G~NDap---aLk~AdVGiamg~~gt~---vAk~aaDivl~ 801 (1044)
-|.-|||.-=.++++...- .|+.|+++|- |+-=.| +|.+++.-+.+-.+-|+ .....||+++.
T Consensus 136 ~~~PcTp~avi~lL~~~~i~l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~~s~t~~l~~~~~~ADIVI~ 207 (284)
T PRK14179 136 VMIPCTPAGIMEMFREYNVELEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLTHSRTRNLAEVARKADILVV 207 (284)
T ss_pred CCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEECCCCCCHHHHHhhCCEEEE
Confidence 4677888776666665532 3899999999 555555 35555555544323332 23467999885
No 212
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=36.05 E-value=1.2e+02 Score=31.96 Aligned_cols=121 Identities=18% Similarity=0.236 Sum_probs=70.3
Q ss_pred CCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCcccccccccceeecchhhhcCCHHHHHHHhccccEEeecC
Q 001616 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (1044)
Q Consensus 665 ~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~ar~s 744 (1044)
++-|++.++++.+++. .++.++|--....+....+++||... ...++...+ .....
T Consensus 99 ~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~gl~~~-----Fd~v~~s~~------------------~g~~K 154 (229)
T COG1011 99 PDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQLGLLDY-----FDAVFISED------------------VGVAK 154 (229)
T ss_pred ccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHcCChhh-----hheEEEecc------------------cccCC
Confidence 4568899999999988 99999999888888888999996543 111221111 22334
Q ss_pred hhhHHHHHHHHHhcC---CEEEEEcCC-cCCHHHHhhCCc-ceeeCCCchH--HHhhccCEEEccCChhHHHHHH
Q 001616 745 PFDKLLMVQCLKKKG---HVVAVTGDG-TNDAPALKEADV-GLSMGIQGTE--VAKESSDIVILDDDFTSVATVL 812 (1044)
Q Consensus 745 P~~K~~lV~~lq~~g---~vVa~~GDG-~NDapaLk~AdV-Giamg~~gt~--vAk~aaDivl~dd~f~~I~~~i 812 (1044)
| ++.-.-..+++.| +.+.++||. .||...-++++. ++-+...+.. .+....|..+. ++..+..++
T Consensus 155 P-~~~~f~~~~~~~g~~p~~~l~VgD~~~~di~gA~~~G~~~vwi~~~~~~~~~~~~~~~~~i~--~l~~l~~~~ 226 (229)
T COG1011 155 P-DPEIFEYALEKLGVPPEEALFVGDSLENDILGARALGMKTVWINRGGKPLPDALEAPDYEIS--SLAELLDLL 226 (229)
T ss_pred C-CcHHHHHHHHHcCCCcceEEEECCChhhhhHHHHhcCcEEEEECCCCCCCCCCccCCceEEc--CHHHHHHHH
Confidence 4 3334444555544 569999996 578344344443 2223322211 11144555554 455555444
No 213
>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=34.86 E-value=1.7e+02 Score=32.70 Aligned_cols=80 Identities=15% Similarity=0.246 Sum_probs=45.8
Q ss_pred EEeecChhhHHHHHHHHHh--cCCEEEEEcCCcC----CHHHHhhCCcceeeCCCchH---HHhhccCEEEccC---Chh
Q 001616 739 VMARSSPFDKLLMVQCLKK--KGHVVAVTGDGTN----DAPALKEADVGLSMGIQGTE---VAKESSDIVILDD---DFT 806 (1044)
Q Consensus 739 V~ar~sP~~K~~lV~~lq~--~g~vVa~~GDG~N----DapaLk~AdVGiamg~~gt~---vAk~aaDivl~dd---~f~ 806 (1044)
-|.-|||.-=.++++...- .|+.|+++|-+.. =+.+|...|--+.+-.+.|. ..-..|||++.-- +|-
T Consensus 135 ~~~PcTp~avi~lL~~y~i~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVt~chs~T~nl~~~~~~ADIvIsAvGkp~~i 214 (282)
T PRK14166 135 GFLPCTPLGVMKLLKAYEIDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTKDLSLYTRQADLIIVAAGCVNLL 214 (282)
T ss_pred CCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEcCCCcCcc
Confidence 3556777766666665532 3899999998854 23355555555544333343 2346789888642 332
Q ss_pred HHHHHHHHhHHHH
Q 001616 807 SVATVLRWGRCVY 819 (1044)
Q Consensus 807 ~I~~~i~~GR~~~ 819 (1044)
. .+.++.|.-+.
T Consensus 215 ~-~~~vk~GavVI 226 (282)
T PRK14166 215 R-SDMVKEGVIVV 226 (282)
T ss_pred C-HHHcCCCCEEE
Confidence 2 34466665543
No 214
>PRK14167 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=34.39 E-value=1.6e+02 Score=33.12 Aligned_cols=78 Identities=21% Similarity=0.250 Sum_probs=45.0
Q ss_pred EEeecChhhHHHHHHHHHh--cCCEEEEEcCCcC----CHHHHhh------CCcceeeCCCchH---HHhhccCEEEcc-
Q 001616 739 VMARSSPFDKLLMVQCLKK--KGHVVAVTGDGTN----DAPALKE------ADVGLSMGIQGTE---VAKESSDIVILD- 802 (1044)
Q Consensus 739 V~ar~sP~~K~~lV~~lq~--~g~vVa~~GDG~N----DapaLk~------AdVGiamg~~gt~---vAk~aaDivl~d- 802 (1044)
-|.-|||.-=.++++..+- .|+.|+++|-+.. =+-+|.+ |-|-++- +.|. ..-..|||++.-
T Consensus 135 ~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~~~~~aTVtvch--s~T~~l~~~~~~ADIvIsAv 212 (297)
T PRK14167 135 RFKPCTPHGIQKLLAAAGVDTEGADVVVVGRSDIVGKPMANLLIQKADGGNATVTVCH--SRTDDLAAKTRRADIVVAAA 212 (297)
T ss_pred CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCcccHHHHHHHHhcCccCCCCEEEEeC--CCCCCHHHHHhhCCEEEEcc
Confidence 3556778776666666542 3899999998754 1234443 4455543 3332 234679999863
Q ss_pred --CChhHHHHHHHHhHHHH
Q 001616 803 --DDFTSVATVLRWGRCVY 819 (1044)
Q Consensus 803 --d~f~~I~~~i~~GR~~~ 819 (1044)
.+|-. .+.++.|.-+.
T Consensus 213 Gkp~~i~-~~~ik~gaiVI 230 (297)
T PRK14167 213 GVPELID-GSMLSEGATVI 230 (297)
T ss_pred CCcCccC-HHHcCCCCEEE
Confidence 23332 34466666553
No 215
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=34.09 E-value=3.4e+02 Score=32.89 Aligned_cols=157 Identities=17% Similarity=0.119 Sum_probs=87.6
Q ss_pred eCCeEEEEeecccccCcEEEeCCCCeeeccEEEEecCceeeecCCCCCCCCceeecCCCCceeeecceEeeCceEEEEEE
Q 001616 237 REARRLQISIFDLVVGDIVFLKIGDQIPADGLFLDGHSLQVDESSMTGESDHVEVDSTNNPFLFSGSKVADGYAQMLVVS 316 (1044)
Q Consensus 237 R~G~~~~I~~~dLvvGDIV~l~~Gd~VPADgill~g~~l~VDES~LTGEs~pv~k~~~~~~~l~sGt~v~~G~~~~~V~~ 316 (1044)
+-|....+...|.+|-|.+.++- ..=+|--.+.|++.-+.-.. |+. + ..+...++|+....-...+.-+.
T Consensus 53 ~~GDiv~v~~G~~iP~Dg~vl~g--~~~vdes~LTGEs~pv~k~~--g~~--v----~~gs~~~~G~~~~~v~~~~~~s~ 122 (499)
T TIGR01494 53 VPGDIVLVKSGEIVPADGVLLSG--SCFVDESNLTGESVPVLKTA--GDA--V----FAGTYVFNGTLIVVVSATGPNTF 122 (499)
T ss_pred CCCCEEEECCCCEeeeeEEEEEc--cEEEEcccccCCCCCeeecc--CCc--c----ccCcEEeccEEEEEEEEeccccH
Confidence 45889999999999999999976 55667777788775444321 432 1 24678888887654221111111
Q ss_pred ecccchhHHHHhhcCCCCCC-CChhHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH--HHhcCCCCCCCccccCCCCCCcc
Q 001616 317 VGMNTAWGEMMSSISSDSNE-RTPLQARL-DKLTSTIGKVGLAVAFLVLVVLLAR--YFTGNTKGENGIKEYNGSNTDID 392 (1044)
Q Consensus 317 vG~~T~~gki~~~~~~~~~~-~tplq~~l-~~la~~i~~~~l~~a~l~~iv~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 392 (1044)
. ..+++++..-.+.+.. .....+.. ..+...+..+++++.+..+...... |..
T Consensus 123 ~---~~i~~~v~~~~~~k~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~~~~~~~~~-------------------- 179 (499)
T TIGR01494 123 G---GKIAVVVYTGFETKTPLQPKLDRLSDIIFILFVLLIALAVFLFWAIGLWDPNSIFK-------------------- 179 (499)
T ss_pred H---HHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHH--------------------
Confidence 1 1122333322222222 22222222 3444444444444444333322110 211
Q ss_pred hhHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHH
Q 001616 393 DVFNAVVSIVAAAVTIVVVAIPEGLPLAVTLTLAYSMK 430 (1044)
Q Consensus 393 ~~~~~~~~~~~~ai~ilvvavP~gLplavtl~la~~~~ 430 (1044)
.+..++...+..+..++|.++|++...+.....+
T Consensus 180 ----~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~~~~~ 213 (499)
T TIGR01494 180 ----IFLRALILLVIAIPIALPLAVTIALAVGDARLAK 213 (499)
T ss_pred ----HHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHH
Confidence 4455667777788889999999998888776554
No 216
>PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=33.37 E-value=1.8e+02 Score=32.60 Aligned_cols=79 Identities=16% Similarity=0.204 Sum_probs=45.3
Q ss_pred EEeecChhhHHHHHHHHHh--cCCEEEEEcCCcC----CHHHHhh------CCcceeeCCCchH--HHhhccCEEEccC-
Q 001616 739 VMARSSPFDKLLMVQCLKK--KGHVVAVTGDGTN----DAPALKE------ADVGLSMGIQGTE--VAKESSDIVILDD- 803 (1044)
Q Consensus 739 V~ar~sP~~K~~lV~~lq~--~g~vVa~~GDG~N----DapaLk~------AdVGiamg~~gt~--vAk~aaDivl~dd- 803 (1044)
-|.-|||.-=.++++...- .|+.|.++|.+.. =+-+|.. |.|-++.. ...+ ..-..||+++.--
T Consensus 135 ~~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~~~~~AtVt~~hs-~t~~l~~~~~~ADIVI~AvG 213 (286)
T PRK14184 135 GFRPCTPAGVMTLLERYGLSPAGKKAVVVGRSNIVGKPLALMLGAPGKFANATVTVCHS-RTPDLAEECREADFLFVAIG 213 (286)
T ss_pred CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHhCCcccCCCEEEEEeC-CchhHHHHHHhCCEEEEecC
Confidence 4567788766666665542 2899999998754 1234544 56666554 2222 2456799988632
Q ss_pred --ChhHHHHHHHHhHHHH
Q 001616 804 --DFTSVATVLRWGRCVY 819 (1044)
Q Consensus 804 --~f~~I~~~i~~GR~~~ 819 (1044)
+|-. .+.+++|.-+.
T Consensus 214 ~p~li~-~~~vk~GavVI 230 (286)
T PRK14184 214 RPRFVT-ADMVKPGAVVV 230 (286)
T ss_pred CCCcCC-HHHcCCCCEEE
Confidence 2222 33456665443
No 217
>COG0078 ArgF Ornithine carbamoyltransferase [Amino acid transport and metabolism]
Probab=31.81 E-value=2e+02 Score=32.34 Aligned_cols=24 Identities=29% Similarity=0.293 Sum_probs=20.7
Q ss_pred CEEEEEcCCCHHHHHHHHHHcCCc
Q 001616 682 VEIKMITGDNVFTAKAIATECGIL 705 (1044)
Q Consensus 682 I~v~mlTGD~~~tA~aIA~~~GI~ 705 (1044)
+..+|+-|...++....|+..++.
T Consensus 100 ~D~I~~R~~~~~~ve~lA~~s~VP 123 (310)
T COG0078 100 VDAIMIRGFSHETLEELAKYSGVP 123 (310)
T ss_pred hheEEEecccHHHHHHHHHhCCCc
Confidence 456889999999999999998875
No 218
>PF03120 DNA_ligase_OB: NAD-dependent DNA ligase OB-fold domain; InterPro: IPR004150 DNA ligases catalyse the crucial step of joining the breaks in duplex DNA during DNA replication, repair and recombination, utilizing either ATP or NAD(+) as a cofactor []. This family is a small domain found after the adenylation domain DNA_ligase_N in NAD+-dependent ligases (IPR001679 from INTERPRO). OB-fold domains generally are involved in nucleic acid binding.; GO: 0003911 DNA ligase (NAD+) activity, 0006260 DNA replication, 0006281 DNA repair; PDB: 2OWO_A 1TAE_A 3UQ8_A 1DGS_A 1V9P_B 3SGI_A.
Probab=31.72 E-value=23 Score=31.64 Aligned_cols=20 Identities=40% Similarity=0.811 Sum_probs=15.4
Q ss_pred ecccccCcEEEe-CCCCeeec
Q 001616 246 IFDLVVGDIVFL-KIGDQIPA 265 (1044)
Q Consensus 246 ~~dLvvGDIV~l-~~Gd~VPA 265 (1044)
-.+|.+||.|.+ +.||.||-
T Consensus 47 ~~~i~~Gd~V~V~raGdVIP~ 67 (82)
T PF03120_consen 47 ELDIRIGDTVLVTRAGDVIPK 67 (82)
T ss_dssp HTT-BBT-EEEEEEETTTEEE
T ss_pred HcCCCCCCEEEEEECCCccce
Confidence 358999999998 58999996
No 219
>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=31.28 E-value=2.2e+02 Score=32.04 Aligned_cols=77 Identities=18% Similarity=0.257 Sum_probs=43.3
Q ss_pred EeecChhhHHHHHHHHHh--cCCEEEEEcCCcC----CHHHHhh--CCcceeeCCCchH---HHhhccCEEEcc---CCh
Q 001616 740 MARSSPFDKLLMVQCLKK--KGHVVAVTGDGTN----DAPALKE--ADVGLSMGIQGTE---VAKESSDIVILD---DDF 805 (1044)
Q Consensus 740 ~ar~sP~~K~~lV~~lq~--~g~vVa~~GDG~N----DapaLk~--AdVGiamg~~gt~---vAk~aaDivl~d---d~f 805 (1044)
|.-|||.-=.++++...- .|+.|+++|-+.- =+-+|.. |-|-++-. .|. ..-..|||++.- .+|
T Consensus 137 ~~PcTp~aii~lL~~~~i~l~Gk~vvVIGrS~iVGkPla~lL~~~~atVtv~hs--~T~~l~~~~~~ADIvIsAvGkp~~ 214 (297)
T PRK14186 137 LRSCTPAGVMRLLRSQQIDIAGKKAVVVGRSILVGKPLALMLLAANATVTIAHS--RTQDLASITREADILVAAAGRPNL 214 (297)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCC--CCCCHHHHHhhCCEEEEccCCcCc
Confidence 556777766666665542 3899999998744 1234544 44444433 332 233668998863 233
Q ss_pred hHHHHHHHHhHHHH
Q 001616 806 TSVATVLRWGRCVY 819 (1044)
Q Consensus 806 ~~I~~~i~~GR~~~ 819 (1044)
-. .+.++.|.-+.
T Consensus 215 i~-~~~ik~gavVI 227 (297)
T PRK14186 215 IG-AEMVKPGAVVV 227 (297)
T ss_pred cC-HHHcCCCCEEE
Confidence 22 34566665543
No 220
>PRK00652 lpxK tetraacyldisaccharide 4'-kinase; Reviewed
Probab=30.68 E-value=1e+02 Score=35.11 Aligned_cols=59 Identities=22% Similarity=0.380 Sum_probs=40.1
Q ss_pred HHHHHHHHhcCCEEEEEcCCc--------------------CCHHHHhhC--CcceeeCCC---chHHHhh--ccCEEEc
Q 001616 749 LLMVQCLKKKGHVVAVTGDGT--------------------NDAPALKEA--DVGLSMGIQ---GTEVAKE--SSDIVIL 801 (1044)
Q Consensus 749 ~~lV~~lq~~g~vVa~~GDG~--------------------NDapaLk~A--dVGiamg~~---gt~vAk~--aaDivl~ 801 (1044)
..+++.|+++|..|+++.-|. .|-|+|-+- ++.+.+|.. +...+.+ .+|++|+
T Consensus 69 ~~L~~~l~~~g~~~~ilsRGYg~~~~~~~~~v~~~~~~~~~GDEp~lla~~~~~~V~V~~dR~~~~~~~~~~~~~dviil 148 (325)
T PRK00652 69 IALAEQLQARGLKPGVVSRGYGGKLEKGPLLVDPDHTAAEVGDEPLLIARRTGAPVAVSPDRVAAARALLAAHGADIIIL 148 (325)
T ss_pred HHHHHHHHHCCCeEEEECCCCCCCcCCCCEEeCCCCChhhhCcHHHHhccCCCceEEEcCcHHHHHHHHHhcCCCCEEEE
Confidence 356678888899999984332 377766444 677777743 2223332 5899999
Q ss_pred cCChhH
Q 001616 802 DDDFTS 807 (1044)
Q Consensus 802 dd~f~~ 807 (1044)
||.|..
T Consensus 149 DDGfQh 154 (325)
T PRK00652 149 DDGLQH 154 (325)
T ss_pred cCCccC
Confidence 999987
No 221
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=30.33 E-value=2.6e+02 Score=27.61 Aligned_cols=82 Identities=12% Similarity=0.159 Sum_probs=54.9
Q ss_pred HHHHhcccceeeeeeeecCchhhcccchHHHhhhhcccCeEEEEEecccCCCchhHHHHHHHHHhcCC-E-EEEEcCCC-
Q 001616 615 HGMAASSLRCIAFAYKQVSEEETAYNNDVKARQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGV-E-IKMITGDN- 691 (1044)
Q Consensus 615 ~~~a~~glR~l~~A~k~l~~~~~~~~~~~~~~~~~~e~~l~llG~vgi~D~lR~~v~~aI~~l~~aGI-~-v~mlTGD~- 691 (1044)
.-+..+|++|+.++...-.+ + -.+...+.+-.++|+-...-.-.+.+++.++.|++.|. . .+++-|--
T Consensus 25 ~~lr~~G~eVi~LG~~vp~e-------~--i~~~a~~~~~d~V~lS~~~~~~~~~~~~~~~~L~~~~~~~~~i~vGG~~~ 95 (137)
T PRK02261 25 RALTEAGFEVINLGVMTSQE-------E--FIDAAIETDADAILVSSLYGHGEIDCRGLREKCIEAGLGDILLYVGGNLV 95 (137)
T ss_pred HHHHHCCCEEEECCCCCCHH-------H--HHHHHHHcCCCEEEEcCccccCHHHHHHHHHHHHhcCCCCCeEEEECCCC
Confidence 34567899999988643211 0 11223355667888888888999999999999999965 2 34555532
Q ss_pred -----HHHHHHHHHHcCCc
Q 001616 692 -----VFTAKAIATECGIL 705 (1044)
Q Consensus 692 -----~~tA~aIA~~~GI~ 705 (1044)
......-++++|..
T Consensus 96 ~~~~~~~~~~~~l~~~G~~ 114 (137)
T PRK02261 96 VGKHDFEEVEKKFKEMGFD 114 (137)
T ss_pred CCccChHHHHHHHHHcCCC
Confidence 23344677788853
No 222
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=29.84 E-value=9.9e+02 Score=31.89 Aligned_cols=195 Identities=13% Similarity=0.102 Sum_probs=94.8
Q ss_pred HHHHHHhHHHHHHHHHHHHHhhc----c-cCCceEEE----EeCCeEEEEeecccccCcEEEeCCCCeeeccEEEEecCc
Q 001616 204 FLVIVVSAFSNFRQARQFDKLSK----I-SNNIKVEV----VREARRLQISIFDLVVGDIVFLKIGDQIPADGLFLDGHS 274 (1044)
Q Consensus 204 ~lv~~v~a~~~~~~~~~~~~l~~----~-~~~~~v~V----iR~G~~~~I~~~dLvvGDIV~l~~Gd~VPADgill~g~~ 274 (1044)
.++.+..-.+..+..+++.++.. . .+....++ +.-|....+..-|.+|.|.+.++..+ +=+|=-.+.|++
T Consensus 118 ~~i~~~qe~ka~~~l~~l~~~~~~~~~ViRdg~~~~I~~~~lv~GDiv~l~~Gd~IPaD~~il~~~~-l~VdeS~LTGES 196 (997)
T TIGR01106 118 GCFSYYQEAKSSKIMESFKNMVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDRIPADLRIISAQG-CKVDNSSLTGES 196 (997)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEeeHHHCCCCCEEEECCCCEEeeeEEEEEccC-cEEEccccCCCC
Confidence 34455555666666666666521 1 12222222 23577888888888888888887643 345666666666
Q ss_pred eeeecCCCCCCCCceeecC--CCCceeeecceEeeCceEEEEEEecccchhHHHHhhcCCC-CCCCChhHHHHHHHHHHH
Q 001616 275 LQVDESSMTGESDHVEVDS--TNNPFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSSISSD-SNERTPLQARLDKLTSTI 351 (1044)
Q Consensus 275 l~VDES~LTGEs~pv~k~~--~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~gki~~~~~~~-~~~~tplq~~l~~la~~i 351 (1044)
.-|.-..-..+..|..... -.+..+.+|+-..--...+.=+..|.-. +++...... ..-...+++..+.++...
T Consensus 197 ~pv~K~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~~V~~tG~~T~~g~i~---~~~~~~~~~~~pl~~~~~~~~~~~~~~~ 273 (997)
T TIGR01106 197 EPQTRSPEFTHENPLETRNIAFFSTNCVEGTARGIVVNTGDRTVMGRIA---SLASGLENGKTPIAIEIEHFIHIITGVA 273 (997)
T ss_pred CceeccCCCcccCccccCCeEEeccEeeeeeEEEEEEEccccchhhHHH---hhhhhcccCCCcHHHHHHHHHHHHHHHH
Confidence 4333221110111211110 1245566665333222223334444332 333322222 222345566666666665
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCCccccCCCCCCcchhHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHH
Q 001616 352 GKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAAAVTIVVVAIPEGLPLAVTLTLAY 427 (1044)
Q Consensus 352 ~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~ilvvavP~gLplavtl~la~ 427 (1044)
..+++++.++.++.. ..+.. .+...+..++..+..++|..++++...+...
T Consensus 274 ~~~~~~~~~~~~~~~-~~~~~------------------------~~~~~i~v~v~~iP~~L~~~v~i~l~~~~~~ 324 (997)
T TIGR01106 274 VFLGVSFFILSLILG-YTWLE------------------------AVIFLIGIIVANVPEGLLATVTVCLTLTAKR 324 (997)
T ss_pred HHHHHHHHHHHHHhc-CCHHH------------------------HHHHHHHHHhhcCCccchHHHHHHHHHHHHH
Confidence 555554444433321 12211 1222344455556777777777777776553
No 223
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=29.71 E-value=78 Score=31.98 Aligned_cols=40 Identities=20% Similarity=0.100 Sum_probs=36.7
Q ss_pred CCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCc
Q 001616 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGIL 705 (1044)
Q Consensus 665 ~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~ 705 (1044)
.+|||+.+.++.|++. +++.++|.-....|..+.+.++..
T Consensus 58 ~~rPgv~efL~~l~~~-yel~I~T~~~~~yA~~vl~~ldp~ 97 (156)
T TIGR02250 58 KLRPFLHEFLKEASKL-YEMHVYTMGTRAYAQAIAKLIDPD 97 (156)
T ss_pred EECCCHHHHHHHHHhh-cEEEEEeCCcHHHHHHHHHHhCcC
Confidence 4799999999999955 999999999999999999998865
No 224
>PLN02897 tetrahydrofolate dehydrogenase/cyclohydrolase, putative
Probab=29.69 E-value=2.6e+02 Score=32.15 Aligned_cols=80 Identities=19% Similarity=0.168 Sum_probs=43.8
Q ss_pred EEeecChhhHHHHHHHHHh--cCCEEEEEcCCcC----CHHHHhhCCcceeeCCCchH---HHhhccCEEEcc---CChh
Q 001616 739 VMARSSPFDKLLMVQCLKK--KGHVVAVTGDGTN----DAPALKEADVGLSMGIQGTE---VAKESSDIVILD---DDFT 806 (1044)
Q Consensus 739 V~ar~sP~~K~~lV~~lq~--~g~vVa~~GDG~N----DapaLk~AdVGiamg~~gt~---vAk~aaDivl~d---d~f~ 806 (1044)
-|.-|||.-=.++++...- .|+.|.++|-+.. =+-+|...|--+.+-.+-|. ..-..|||++.- .+|-
T Consensus 192 ~~~PCTp~avi~LL~~~~i~l~GK~vvVIGRS~iVGkPla~LL~~~~ATVTicHs~T~nl~~~~~~ADIvIsAvGkp~~v 271 (345)
T PLN02897 192 LFVSCTPKGCVELLIRSGVEIAGKNAVVIGRSNIVGLPMSLLLQRHDATVSTVHAFTKDPEQITRKADIVIAAAGIPNLV 271 (345)
T ss_pred CCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCccccHHHHHHHHHCCCEEEEEcCCCCCHHHHHhhCCEEEEccCCcCcc
Confidence 3556777666555555432 2899999998743 23355555444444322232 234678988863 2332
Q ss_pred HHHHHHHHhHHHH
Q 001616 807 SVATVLRWGRCVY 819 (1044)
Q Consensus 807 ~I~~~i~~GR~~~ 819 (1044)
. .+.++.|.-+.
T Consensus 272 ~-~d~vk~GavVI 283 (345)
T PLN02897 272 R-GSWLKPGAVVI 283 (345)
T ss_pred C-HHHcCCCCEEE
Confidence 2 33466665543
No 225
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=29.68 E-value=1.3e+02 Score=28.42 Aligned_cols=82 Identities=20% Similarity=0.300 Sum_probs=56.1
Q ss_pred HHHHhcccceeeeeeeecCchhhcccchHHHhhhhcccCeEEEEEecccCCCchhHHHHHHHHHhcCC-E-EEEEcCCCH
Q 001616 615 HGMAASSLRCIAFAYKQVSEEETAYNNDVKARQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGV-E-IKMITGDNV 692 (1044)
Q Consensus 615 ~~~a~~glR~l~~A~k~l~~~~~~~~~~~~~~~~~~e~~l~llG~vgi~D~lR~~v~~aI~~l~~aGI-~-v~mlTGD~~ 692 (1044)
.-+...|++|+.+... ++.++ ......+.+-.++|+-...++--+.+++.++.+|+.+- + .+++-|-..
T Consensus 21 ~~l~~~G~~V~~lg~~-~~~~~--------l~~~~~~~~pdvV~iS~~~~~~~~~~~~~i~~l~~~~~~~~~i~vGG~~~ 91 (119)
T cd02067 21 RALRDAGFEVIDLGVD-VPPEE--------IVEAAKEEDADAIGLSGLLTTHMTLMKEVIEELKEAGLDDIPVLVGGAIV 91 (119)
T ss_pred HHHHHCCCEEEECCCC-CCHHH--------HHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHHcCCCCCeEEEECCCC
Confidence 3456789999776632 33111 11223355667888888878888999999999999976 4 467777665
Q ss_pred HHHHHHHHHcCCc
Q 001616 693 FTAKAIATECGIL 705 (1044)
Q Consensus 693 ~tA~aIA~~~GI~ 705 (1044)
..-...+++.|..
T Consensus 92 ~~~~~~~~~~G~D 104 (119)
T cd02067 92 TRDFKFLKEIGVD 104 (119)
T ss_pred ChhHHHHHHcCCe
Confidence 5445688888874
No 226
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=29.67 E-value=1.8e+02 Score=33.04 Aligned_cols=48 Identities=15% Similarity=0.144 Sum_probs=37.4
Q ss_pred EEecccCCCchhHHHHHHHHHhc----CCEEEEEcCCC---HH-HHHHHHHHcCCc
Q 001616 658 GIVGIKDPCRPGVQKAVEACQSA----GVEIKMITGDN---VF-TAKAIATECGIL 705 (1044)
Q Consensus 658 G~vgi~D~lR~~v~~aI~~l~~a----GI~v~mlTGD~---~~-tA~aIA~~~GI~ 705 (1044)
|++.-.+++-|++.++++.+++. |+++..+|-.. .. .+..+.+++|+.
T Consensus 9 GvL~~g~~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~~ 64 (321)
T TIGR01456 9 GVLFRGKKPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGVD 64 (321)
T ss_pred CceECCccccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCCC
Confidence 55666788899999999999999 99999999665 33 255556677774
No 227
>TIGR00381 cdhD CO dehydrogenase/acetyl-CoA synthase, delta subunit. This is the small subunit of a heterodimer which catalyzes the reaction CO + H2O + Acceptor = CO2 + Reduced acceptor and is involved in the synthesis of acetyl-CoA from CO2 and H2.
Probab=29.29 E-value=3.3e+02 Score=31.68 Aligned_cols=137 Identities=18% Similarity=0.125 Sum_probs=68.5
Q ss_pred hHHHHHHHHHhcCCEEEEEcCCCH-------H---HHHHHHHHcCCcccccccccceeecchhhhcCCHHHHHHHhcc--
Q 001616 669 GVQKAVEACQSAGVEIKMITGDNV-------F---TAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDK-- 736 (1044)
Q Consensus 669 ~v~~aI~~l~~aGI~v~mlTGD~~-------~---tA~aIA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~-- 736 (1044)
=+++.|+.++.-.|-++..|||.. + +++.++..+++ .+++.|..-.....+-+...+..
T Consensus 144 wak~~V~~~~aD~Ialr~~S~DP~~~d~~~~e~a~~vk~V~~av~v---------PLIL~gsg~~~kD~eVLeaaLe~~~ 214 (389)
T TIGR00381 144 WARKCVKEFGADMVTIHLISTDPKLDDKSPSEAAKVLEDVLQAVDV---------PIVIGGSGNPEKDPLVLEKAAEVAE 214 (389)
T ss_pred HHHHHHHHhCCCEEEEEecCCCccccccCHHHHHHHHHHHHHhCCC---------CEEEeCCCCCcCCHHHHHHHHHHhC
Confidence 344555666666667777777755 2 22333333332 24555442222222223222221
Q ss_pred --ccEEeecChh-hHHHHHHHHHhcCCEEEEEc-CCcCCHHHHhhCCcceeeCCCchHHHhhccCEEEccCChhHHHHHH
Q 001616 737 --IRVMARSSPF-DKLLMVQCLKKKGHVVAVTG-DGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVL 812 (1044)
Q Consensus 737 --~~V~ar~sP~-~K~~lV~~lq~~g~vVa~~G-DG~NDapaLk~AdVGiamg~~gt~vAk~aaDivl~dd~f~~I~~~i 812 (1044)
-.+..-.+.+ .=..+.+..++.|+.|.+-+ |..|.+--|..-=. .+|. ...|||+ |.+-..+-.-+
T Consensus 215 G~kpLL~SAt~e~Ny~~ia~lAk~yg~~Vvv~s~~Din~ak~Ln~kL~--~~Gv-------~~eDIVl-DP~t~alG~Gi 284 (389)
T TIGR00381 215 GERCLLASANLDLDYEKIANAAKKYGHVVLSWTIMDINMQKTLNRYLL--KRGL-------MPRDIVM-DPTTCALGYGI 284 (389)
T ss_pred CCCcEEEecCchhhHHHHHHHHHHhCCeEEEEcCCcHHHHHHHHHHHH--HcCC-------CHHHEEE-cCCCccccCCH
Confidence 2356667777 44567777788899777666 77776654433200 2232 1236554 44443344445
Q ss_pred HHhHHHHHhHHH
Q 001616 813 RWGRCVYTNIQK 824 (1044)
Q Consensus 813 ~~GR~~~~ni~k 824 (1044)
+.+-..+.+||.
T Consensus 285 eya~s~~erIRr 296 (389)
T TIGR00381 285 EFSITNMERIRL 296 (389)
T ss_pred HHHHHHHHHHHH
Confidence 544444555543
No 228
>PF02401 LYTB: LytB protein; InterPro: IPR003451 Terpenes are among the largest groups of natural products and include compounds such as vitamins, cholesterol and carotenoids. The biosynthesis of all terpenoids begins with one or both of the two C5 precursors of the pathway: isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). In animals, fungi, and certain bacteria, the synthesis of IPP and DMAPP occurs via the well-known mevalonate pathway, however, a second, nonmevalonate terpenoid pathway has been identified in many eubacteria, algae and the chloroplasts of higher plants []. LytB(IspH) catalyses the conversion of 1-hydroy-2-methyl-2-(E)-butenyl 4-diphosphate into IPP and DMAPP in this second pathway The enzyme appears to be responsible for a branch-step in the nonmevalonate pathway, in that IPP and DMAPP are produced in parallel from a single precursor although the exact mechanism of this is not currently fully understood []. Escherichia coli LytB protein had been found to regulate the activity of RelA (guanosine 3',5'-bispyrophosphate synthetase I), which in turn controls the level of a regulatory metabolite. It is involved in penicillin tolerance and the stringent response [].; GO: 0019288 isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway, 0055114 oxidation-reduction process; PDB: 3DNF_B 3SZL_B 3KE8_B 3KEF_B 3SZU_A 3KEL_A 3F7T_B 3KE9_B 3KEM_B 3T0G_A ....
Probab=29.09 E-value=1.7e+02 Score=32.60 Aligned_cols=175 Identities=14% Similarity=0.131 Sum_probs=89.6
Q ss_pred ecCcHHHHHHhcccccccCCeeecCChhhHHHHHHHHHHHHhcccceeeeeeeecCchhh----cc--c----chHHHhh
Q 001616 578 WKGAAEIILAMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEET----AY--N----NDVKARQ 647 (1044)
Q Consensus 578 ~KGA~e~Il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~~A~k~l~~~~~----~~--~----~~~~~~~ 647 (1044)
-.|.+..+.+.... .+-.+...+=..-.++.+.+.+++++|+.++.++.+.-++-.. -. . ...+...
T Consensus 71 AHGv~~~~~~~l~~---~g~~viDaTCP~V~k~~~~v~~~~~~Gy~iviiG~~~HpEv~gi~g~~~~~~~~vv~~~~~~~ 147 (281)
T PF02401_consen 71 AHGVPPEVYEELKE---RGLEVIDATCPFVKKIHKIVRKYAKEGYQIVIIGDKNHPEVIGILGYAPEEKAIVVESPEDVE 147 (281)
T ss_dssp TT---HHHHHHHHH---TTEEEEE---HHHHHHHHHHHHHHHCT-EEEEES-TT-HHHHHHHCCHHTS-EEEESSHHHHH
T ss_pred CCCCCHHHHHHHHH---cCCEEEECCChhHHHHHHHHHHHHhcCCEEEEECCCCCceEEEecccccCCceEEeCChhhhc
Confidence 45777777665542 1222333444556788999999999999999999866543110 00 0 0001111
Q ss_pred hhcccCeEEEEEecccCCCchhHHHHHHHHHhcCCEEE--------EEcCCCHHHHHHHHHHcCCcccccccccceeecc
Q 001616 648 RLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIK--------MITGDNVFTAKAIATECGILRLDQQVEKGEVVEG 719 (1044)
Q Consensus 648 ~~~e~~l~llG~vgi~D~lR~~v~~aI~~l~~aGI~v~--------mlTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~g 719 (1044)
+.+..+..-++++.=-=-.+++..+.++.+++..-.+. ..|-+....++.+|+++.+.
T Consensus 148 ~l~~~~~~kv~vvsQTT~~~~~~~~i~~~l~~~~~~~~~~~~nTIC~aT~~RQ~a~~~La~~vD~m-------------- 213 (281)
T PF02401_consen 148 KLPISDPKKVAVVSQTTQSVEKFEEIVEALKKRFPELEGPVFNTICYATQNRQEAARELAKEVDAM-------------- 213 (281)
T ss_dssp HGGGSSTTCEEEEE-TTS-HHHHHHHHHHHHHHSTCEE-SCC-S--CHHHHHHHHHHHHHCCSSEE--------------
T ss_pred ccCCCCCCeEEEEEeecccHHHHHHHHHHHHHhCccccCCCCCCCCHhHHHHHHHHHHHHhhCCEE--------------
Confidence 11222222344444444456667777777776655444 33444455555555544332
Q ss_pred hhhhcCCHHHHHHHhccccEEeecChhhHHHHHHHHHhcCCEEEEEcCCcCCH--HHHhhC-CcceeeCCCch
Q 001616 720 VEFRNYTDEERIQKVDKIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDA--PALKEA-DVGLSMGIQGT 789 (1044)
Q Consensus 720 ~~~~~~~~~~~~~~~~~~~V~ar~sP~~K~~lV~~lq~~g~vVa~~GDG~NDa--paLk~A-dVGiamg~~gt 789 (1044)
-|.+.-+...-.+|.+..++.|..+-.+.+ ..|. ..|+.+ .|||.-| ..|
T Consensus 214 ------------------iVIGg~~SsNT~kL~eia~~~~~~t~~Ie~-~~el~~~~l~~~~~VGItaG-AST 266 (281)
T PF02401_consen 214 ------------------IVIGGKNSSNTRKLAEIAKEHGKPTYHIET-ADELDPEWLKGVKKVGITAG-AST 266 (281)
T ss_dssp ------------------EEES-TT-HHHHHHHHHHHHCTTCEEEESS-GGG--HHHHTT-SEEEEEE--TTS
T ss_pred ------------------EEecCCCCccHHHHHHHHHHhCCCEEEeCC-ccccCHhHhCCCCEEEEEcc-CCC
Confidence 144444445666788888888877777755 3454 457777 7899887 444
No 229
>PLN02591 tryptophan synthase
Probab=27.90 E-value=4.3e+02 Score=28.94 Aligned_cols=86 Identities=20% Similarity=0.178 Sum_probs=51.4
Q ss_pred hhHHHHHHHHHhcCCE-EEEEcCCC-HHHHHHHHHHc-CCcccccccccceeecchhhhcCCHHHHHHHhccccEEeecC
Q 001616 668 PGVQKAVEACQSAGVE-IKMITGDN-VFTAKAIATEC-GILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (1044)
Q Consensus 668 ~~v~~aI~~l~~aGI~-v~mlTGD~-~~tA~aIA~~~-GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~ar~s 744 (1044)
++..+..+.|++.|+. |.++|-.. .+..+.||+.. |.+- .....-++|.. ...
T Consensus 118 ee~~~~~~~~~~~gl~~I~lv~Ptt~~~ri~~ia~~~~gFIY----~Vs~~GvTG~~--------------------~~~ 173 (250)
T PLN02591 118 EETEALRAEAAKNGIELVLLTTPTTPTERMKAIAEASEGFVY----LVSSTGVTGAR--------------------ASV 173 (250)
T ss_pred HHHHHHHHHHHHcCCeEEEEeCCCCCHHHHHHHHHhCCCcEE----EeeCCCCcCCC--------------------cCC
Confidence 7788888999999987 55555555 35677777765 3321 00000111210 012
Q ss_pred hhhHHHHHHHHHhcCCEEEEEcCCcC---CHHHHhh
Q 001616 745 PFDKLLMVQCLKKKGHVVAVTGDGTN---DAPALKE 777 (1044)
Q Consensus 745 P~~K~~lV~~lq~~g~vVa~~GDG~N---DapaLk~ 777 (1044)
|.+-...++.+|+...+-.++|=|++ |+..+.+
T Consensus 174 ~~~~~~~i~~vk~~~~~Pv~vGFGI~~~e~v~~~~~ 209 (250)
T PLN02591 174 SGRVESLLQELKEVTDKPVAVGFGISKPEHAKQIAG 209 (250)
T ss_pred chhHHHHHHHHHhcCCCceEEeCCCCCHHHHHHHHh
Confidence 55666778888886556667899998 5555443
No 230
>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=27.62 E-value=6.2e+02 Score=28.22 Aligned_cols=81 Identities=17% Similarity=0.276 Sum_probs=47.3
Q ss_pred EEeecChhhHHHHHHHHHh--cCCEEEEEcCCcC----CHHHHhhCCcceeeCCCchH-H--HhhccCEEEccC---Chh
Q 001616 739 VMARSSPFDKLLMVQCLKK--KGHVVAVTGDGTN----DAPALKEADVGLSMGIQGTE-V--AKESSDIVILDD---DFT 806 (1044)
Q Consensus 739 V~ar~sP~~K~~lV~~lq~--~g~vVa~~GDG~N----DapaLk~AdVGiamg~~gt~-v--Ak~aaDivl~dd---~f~ 806 (1044)
-|.-|||.-=.++++...- .|+.|+++|.+.. =+-+|.+.+.-+.+--+-|. . .-..|||++.-- +|-
T Consensus 136 ~~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~~VGkPla~lL~~~~AtVt~chs~T~~l~~~~~~ADIvIsAvGkp~~i 215 (278)
T PRK14172 136 CFLPCTPNSVITLIKSLNIDIEGKEVVVIGRSNIVGKPVAQLLLNENATVTICHSKTKNLKEVCKKADILVVAIGRPKFI 215 (278)
T ss_pred CCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEcCCCcCcc
Confidence 4667788777777766543 3899999998754 23355555544444433332 2 235689888642 332
Q ss_pred HHHHHHHHhHHHHH
Q 001616 807 SVATVLRWGRCVYT 820 (1044)
Q Consensus 807 ~I~~~i~~GR~~~~ 820 (1044)
. .+.+++|.-+.+
T Consensus 216 ~-~~~ik~gavVID 228 (278)
T PRK14172 216 D-EEYVKEGAIVID 228 (278)
T ss_pred C-HHHcCCCcEEEE
Confidence 2 344666665544
No 231
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=27.42 E-value=28 Score=35.68 Aligned_cols=14 Identities=36% Similarity=0.316 Sum_probs=12.6
Q ss_pred EeeCcccccccCce
Q 001616 454 ICTDKTGTLTLNQM 467 (1044)
Q Consensus 454 Ic~DKTGTLT~n~m 467 (1044)
+|||.+||||.+.+
T Consensus 1 v~fD~DGTL~~~~~ 14 (192)
T PF12710_consen 1 VIFDFDGTLTDSDS 14 (192)
T ss_dssp EEEESBTTTBSSHH
T ss_pred eEEecCcCeecCCC
Confidence 69999999999983
No 232
>TIGR00640 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal domain. Methylmalonyl-CoA mutase (EC 5.4.99.2) catalyzes a reversible isomerization between L-methylmalonyl-CoA and succinyl-CoA. The enzyme uses an adenosylcobalamin cofactor. It may be a homodimer, as in mitochondrion, or a heterodimer with partially homologous beta chain that does not bind the adenosylcobalamin cofactor, as in Propionibacterium freudenreichii. The most similar archaeal sequences are separate chains, such as AF2215 and AF2219 of Archaeoglobus fulgidus, that correspond roughly to the first 500 and last 130 residues, respectively of known methylmalonyl-CoA mutases. This model describes the C-terminal domain subfamily. In a neighbor-joining tree (methylaspartate mutase S chain as the outgroup), AF2219 branches with a coenzyme B12-dependent enzyme known not to be 5.4.99.2.
Probab=27.39 E-value=2e+02 Score=28.23 Aligned_cols=83 Identities=13% Similarity=0.080 Sum_probs=56.4
Q ss_pred HHHHhcccceeeeeeeecCchhhcccchHHHhhhhcccCeEEEEEecccCCCchhHHHHHHHHHhcCC-EE-EEEcCCCH
Q 001616 615 HGMAASSLRCIAFAYKQVSEEETAYNNDVKARQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGV-EI-KMITGDNV 692 (1044)
Q Consensus 615 ~~~a~~glR~l~~A~k~l~~~~~~~~~~~~~~~~~~e~~l~llG~vgi~D~lR~~v~~aI~~l~~aGI-~v-~mlTGD~~ 692 (1044)
.-|...|++|+-+....-++ +.-+...+.+-..+|+-++...--+.+++.++.|+++|. .+ +|+-|-.+
T Consensus 24 ~~l~~~GfeVi~lg~~~s~e---------~~v~aa~e~~adii~iSsl~~~~~~~~~~~~~~L~~~g~~~i~vivGG~~~ 94 (132)
T TIGR00640 24 TAYADLGFDVDVGPLFQTPE---------EIARQAVEADVHVVGVSSLAGGHLTLVPALRKELDKLGRPDILVVVGGVIP 94 (132)
T ss_pred HHHHhCCcEEEECCCCCCHH---------HHHHHHHHcCCCEEEEcCchhhhHHHHHHHHHHHHhcCCCCCEEEEeCCCC
Confidence 34567788888766532111 011233456778999999999999999999999999987 33 55555455
Q ss_pred HHHHHHHHHcCCcc
Q 001616 693 FTAKAIATECGILR 706 (1044)
Q Consensus 693 ~tA~aIA~~~GI~~ 706 (1044)
..-.+--+++|+..
T Consensus 95 ~~~~~~l~~~Gvd~ 108 (132)
T TIGR00640 95 PQDFDELKEMGVAE 108 (132)
T ss_pred hHhHHHHHHCCCCE
Confidence 44456678888854
No 233
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=26.98 E-value=98 Score=34.61 Aligned_cols=63 Identities=13% Similarity=0.245 Sum_probs=35.5
Q ss_pred EEeecChhhHHHHHHHHH--hcCCEEEEEcCCcC----CHHHHhh--CCcceeeCCCchHH--HhhccCEEEcc
Q 001616 739 VMARSSPFDKLLMVQCLK--KKGHVVAVTGDGTN----DAPALKE--ADVGLSMGIQGTEV--AKESSDIVILD 802 (1044)
Q Consensus 739 V~ar~sP~~K~~lV~~lq--~~g~vVa~~GDG~N----DapaLk~--AdVGiamg~~gt~v--Ak~aaDivl~d 802 (1044)
-|.-|||.-=.++++... -.|..|+++|-|-. =+.+|.. |.|-+.-. ...+. .-..||+++.-
T Consensus 136 ~~~PcTp~ai~~ll~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s-~t~~l~~~~~~ADIVIsA 208 (286)
T PRK14175 136 TFVPCTPLGIMEILKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHS-RSKDMASYLKDADVIVSA 208 (286)
T ss_pred CCCCCcHHHHHHHHHHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeC-CchhHHHHHhhCCEEEEC
Confidence 456677776666666653 23899999999752 1223433 44444432 12222 33567887753
No 234
>cd05017 SIS_PGI_PMI_1 The members of this protein family contain the SIS (Sugar ISomerase) domain and have both the phosphoglucose isomerase (PGI) and the phosphomannose isomerase (PMI) functions. These functions catalyze the reversible reactions of glucose 6-phosphate to fructose 6-phosphate, and mannose 6-phosphate to fructose 6-phosphate, respectively at an equal rate. This protein contains two SIS domains. This alignment is based on the first SIS domain.
Probab=26.37 E-value=1.1e+02 Score=28.94 Aligned_cols=40 Identities=25% Similarity=0.262 Sum_probs=30.0
Q ss_pred CCCchhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCc
Q 001616 664 DPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGIL 705 (1044)
Q Consensus 664 D~lR~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~ 705 (1044)
.---+++.++++.+++.|++++.+|++.. -...|.+-|..
T Consensus 53 SG~t~e~i~~~~~a~~~g~~iI~IT~~~~--l~~~~~~~~~~ 92 (119)
T cd05017 53 SGNTEETLSAVEQAKERGAKIVAITSGGK--LLEMAREHGVP 92 (119)
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHcCCc
Confidence 33457899999999999999999999874 33355554543
No 235
>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=25.90 E-value=7.3e+02 Score=27.79 Aligned_cols=92 Identities=15% Similarity=0.178 Sum_probs=48.2
Q ss_pred HHHHHHhccccEEeecChhhHHHHHHHHHh--cCCEEEEEcCCcC----CHHHHhhCCcceeeCCCchH---HHhhccCE
Q 001616 728 EERIQKVDKIRVMARSSPFDKLLMVQCLKK--KGHVVAVTGDGTN----DAPALKEADVGLSMGIQGTE---VAKESSDI 798 (1044)
Q Consensus 728 ~~~~~~~~~~~V~ar~sP~~K~~lV~~lq~--~g~vVa~~GDG~N----DapaLk~AdVGiamg~~gt~---vAk~aaDi 798 (1044)
..+-.....-.-|.-|||.-=.++++...- .|+.|.++|-+.. =+-+|...+--+.+-.+.|. ..-..|||
T Consensus 126 ~n~g~l~~g~~~~~PcTp~avi~ll~~y~i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVt~chs~T~~l~~~~~~ADI 205 (284)
T PRK14177 126 LSFGKLSMGVETYLPCTPYGMVLLLKEYGIDVTGKNAVVVGRSPILGKPMAMLLTEMNATVTLCHSKTQNLPSIVRQADI 205 (284)
T ss_pred hhHHHHHcCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCE
Confidence 333333333335667788665555554432 2888999998744 12345444444443323332 23457888
Q ss_pred EEcc---CChhHHHHHHHHhHHHHH
Q 001616 799 VILD---DDFTSVATVLRWGRCVYT 820 (1044)
Q Consensus 799 vl~d---d~f~~I~~~i~~GR~~~~ 820 (1044)
++.- .+|-. .+.+++|.-+.+
T Consensus 206 vIsAvGk~~~i~-~~~ik~gavVID 229 (284)
T PRK14177 206 IVGAVGKPEFIK-ADWISEGAVLLD 229 (284)
T ss_pred EEEeCCCcCccC-HHHcCCCCEEEE
Confidence 8753 23433 445666665443
No 236
>COG1609 PurR Transcriptional regulators [Transcription]
Probab=25.52 E-value=8.4e+02 Score=27.74 Aligned_cols=140 Identities=21% Similarity=0.207 Sum_probs=73.4
Q ss_pred cCChhhHHHHHHHHHHHHhcccceeeeeeeecCchhhcccchHHHhhhhcccCeEEEEEec--ccCCCchhHHHHHH-HH
Q 001616 601 SMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAYNNDVKARQRLKEEGLTLLGIVG--IKDPCRPGVQKAVE-AC 677 (1044)
Q Consensus 601 ~l~~~~~~~~~~~i~~~a~~glR~l~~A~k~l~~~~~~~~~~~~~~~~~~e~~l~llG~vg--i~D~lR~~v~~aI~-~l 677 (1044)
.++++.|+++.+.++++ ||+.=..|. ....+.-..+|++. +.+|.-.+....|+ .|
T Consensus 26 ~Vs~eTr~kV~~a~~el---gY~pN~~Ar------------------~L~~~~s~~Ig~i~p~~~~~~~~~i~~gi~~~~ 84 (333)
T COG1609 26 YVSEETREKVLAAIKEL---GYRPNAVAR------------------SLRTGRTKTIGLVVPDITNPFFAEILKGIEEAA 84 (333)
T ss_pred CCCHHHHHHHHHHHHHH---CCCCCHHHH------------------HHHhCCCCEEEEEeCCCCCchHHHHHHHHHHHH
Confidence 46788899888888775 333211111 11111223555552 44555566655554 46
Q ss_pred HhcCCEEEEEcCCC-HHH---HHHHHHHcCCcccccccccceeecchhhhcCCHHHHHHHhccccEEeecChhh------
Q 001616 678 QSAGVEIKMITGDN-VFT---AKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPFD------ 747 (1044)
Q Consensus 678 ~~aGI~v~mlTGD~-~~t---A~aIA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~ar~sP~~------ 747 (1044)
++.|+.+.+...++ .+. +...-.+-+. +++++.+........+.+.+.-..+.++.|..|..
T Consensus 85 ~~~gy~~~l~~~~~~~~~e~~~~~~l~~~~v--------dGiIi~~~~~~~~~~~~l~~~~~P~V~i~~~~~~~~~~~V~ 156 (333)
T COG1609 85 REAGYSLLLANTDDDPEKEREYLETLLQKRV--------DGLILLGERPNDSLLELLAAAGIPVVVIDRSPPGLGVPSVG 156 (333)
T ss_pred HHcCCEEEEECCCCCHHHHHHHHHHHHHcCC--------CEEEEecCCCCHHHHHHHHhcCCCEEEEeCCCccCCCCEEE
Confidence 78899988888776 222 2222222222 45666662222212222333222333455544421
Q ss_pred ------HHHHHHHHHhcCCE-EEEEcCCc
Q 001616 748 ------KLLMVQCLKKKGHV-VAVTGDGT 769 (1044)
Q Consensus 748 ------K~~lV~~lq~~g~v-Va~~GDG~ 769 (1044)
-..+++.|.++||. ++++|.+.
T Consensus 157 ~Dn~~~~~~a~~~L~~~G~~~i~~i~~~~ 185 (333)
T COG1609 157 IDNFAGAYLATEHLIELGHRRIAFIGGPL 185 (333)
T ss_pred EChHHHHHHHHHHHHHCCCceEEEEeCCC
Confidence 24678999998754 88887764
No 237
>cd00860 ThrRS_anticodon ThrRS Threonyl-anticodon binding domain. ThrRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only.
Probab=25.25 E-value=1.5e+02 Score=26.04 Aligned_cols=47 Identities=11% Similarity=0.147 Sum_probs=37.5
Q ss_pred EecccCCCchhHHHHHHHHHhcCCEEEE-EcCCCHHHHHHHHHHcCCc
Q 001616 659 IVGIKDPCRPGVQKAVEACQSAGVEIKM-ITGDNVFTAKAIATECGIL 705 (1044)
Q Consensus 659 ~vgi~D~lR~~v~~aI~~l~~aGI~v~m-lTGD~~~tA~aIA~~~GI~ 705 (1044)
++.+.+..++.+.+..+.|+++|++|.+ ..+.+...-..-|.+.|+.
T Consensus 6 ii~~~~~~~~~a~~~~~~Lr~~g~~v~~d~~~~~~~~~~~~a~~~g~~ 53 (91)
T cd00860 6 VIPVTDEHLDYAKEVAKKLSDAGIRVEVDLRNEKLGKKIREAQLQKIP 53 (91)
T ss_pred EEeeCchHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHcCCC
Confidence 3445567788899999999999999988 5677777777788888875
No 238
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=25.13 E-value=2.8e+02 Score=28.38 Aligned_cols=107 Identities=16% Similarity=0.202 Sum_probs=64.8
Q ss_pred hHHHHHHHHHhcCCEEEEEcCCCHHH-HHHHHHHcCCcccccccccceeecchhhhcCCHHHHHHHhccccEEeecChhh
Q 001616 669 GVQKAVEACQSAGVEIKMITGDNVFT-AKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPFD 747 (1044)
Q Consensus 669 ~v~~aI~~l~~aGI~v~mlTGD~~~t-A~aIA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~ar~sP~~ 747 (1044)
|.-++++.+++.|=++-+++=.+... +..++.-+|+. +..+.=.+|++
T Consensus 65 Dil~al~~a~~~~~~Iavv~~~~~~~~~~~~~~ll~~~-------------------------------i~~~~~~~~~e 113 (176)
T PF06506_consen 65 DILRALAKAKKYGPKIAVVGYPNIIPGLESIEELLGVD-------------------------------IKIYPYDSEEE 113 (176)
T ss_dssp HHHHHHHHCCCCTSEEEEEEESS-SCCHHHHHHHHT-E-------------------------------EEEEEESSHHH
T ss_pred HHHHHHHHHHhcCCcEEEEecccccHHHHHHHHHhCCc-------------------------------eEEEEECCHHH
Confidence 44555555555555666665554443 45555555542 22455567888
Q ss_pred HHHHHHHHHhcCCEEEEEcCCcCCHHHHhhCCcceeeCCCchHHHhhccCEEEccCChhHHHHHHHHhHHHHHhHHH
Q 001616 748 KLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLRWGRCVYTNIQK 824 (1044)
Q Consensus 748 K~~lV~~lq~~g~vVa~~GDG~NDapaLk~AdVGiamg~~gt~vAk~aaDivl~dd~f~~I~~~i~~GR~~~~ni~k 824 (1044)
=...++.+++.| .-+++|++.- +..-+ +..-..++...+..+|..++.+++++++..++
T Consensus 114 ~~~~i~~~~~~G-~~viVGg~~~-~~~A~----------------~~gl~~v~i~sg~esi~~Al~eA~~i~~~~~~ 172 (176)
T PF06506_consen 114 IEAAIKQAKAEG-VDVIVGGGVV-CRLAR----------------KLGLPGVLIESGEESIRRALEEALRIARARRR 172 (176)
T ss_dssp HHHHHHHHHHTT---EEEESHHH-HHHHH----------------HTTSEEEESS--HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcC-CcEEECCHHH-HHHHH----------------HcCCcEEEEEecHHHHHHHHHHHHHHHHHHHH
Confidence 888999999888 4567788631 11111 12234577777899999999999999887664
No 239
>PF03129 HGTP_anticodon: Anticodon binding domain; InterPro: IPR004154 tRNA synthetases, or tRNA ligases are involved in protein synthesis. This domain is found in histidyl, glycyl, threonyl and prolyl tRNA synthetases [] it is probably the anticodon binding domain [].; GO: 0004812 aminoacyl-tRNA ligase activity, 0005524 ATP binding; PDB: 1KOG_B 1EVL_D 1EVK_B 1QF6_A 1FYF_B 2I4O_A 2I4M_A 2I4N_A 2I4L_A 1HC7_D ....
Probab=24.73 E-value=1.8e+02 Score=26.04 Aligned_cols=48 Identities=15% Similarity=0.156 Sum_probs=38.2
Q ss_pred EEecccC---CCchhHHHHHHHHHhcCCEEEEE-cCCCHHHHHHHHHHcCCc
Q 001616 658 GIVGIKD---PCRPGVQKAVEACQSAGVEIKMI-TGDNVFTAKAIATECGIL 705 (1044)
Q Consensus 658 G~vgi~D---~lR~~v~~aI~~l~~aGI~v~ml-TGD~~~tA~aIA~~~GI~ 705 (1044)
.++.+.+ ...+-+.+..+.|+++|+++.+- ++++......-|...|+.
T Consensus 3 ~Ii~~~~~~~~~~~~a~~l~~~L~~~gi~v~~d~~~~~~~k~~~~a~~~g~p 54 (94)
T PF03129_consen 3 VIIPVGKKDEEIIEYAQELANKLRKAGIRVELDDSDKSLGKQIKYADKLGIP 54 (94)
T ss_dssp EEEESSCSHHHHHHHHHHHHHHHHHTTSEEEEESSSSTHHHHHHHHHHTTES
T ss_pred EEEEeCCCcHHHHHHHHHHHHHHHHCCCEEEEECCCCchhHHHHHHhhcCCe
Confidence 4555666 66778889999999999998887 667777778888888875
No 240
>COG0272 Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair]
Probab=24.70 E-value=1.2e+02 Score=37.68 Aligned_cols=74 Identities=22% Similarity=0.361 Sum_probs=46.7
Q ss_pred eecccccCcEEEe-CCCCeeec-cEEEEecCceeeecCCCCCCCCceeecCCCCceeeecceEeeCceEEEEEEecccch
Q 001616 245 SIFDLVVGDIVFL-KIGDQIPA-DGLFLDGHSLQVDESSMTGESDHVEVDSTNNPFLFSGSKVADGYAQMLVVSVGMNTA 322 (1044)
Q Consensus 245 ~~~dLvvGDIV~l-~~Gd~VPA-Dgill~g~~l~VDES~LTGEs~pv~k~~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~ 322 (1044)
.-.||.+||-|.+ ++||+||- ++++.+ .=+|+..|.. -|..-| ..||.+..+.+.+..-+++..+.
T Consensus 364 ~rkdIrIGDtV~V~kAGdVIP~V~~Vv~e---------~R~~~~~~~~-~P~~CP--~C~s~l~r~~~e~~~rC~n~~~C 431 (667)
T COG0272 364 KRKDIRIGDTVVVRKAGDVIPQVVGVVLE---------KRPGNEKPIP-FPTHCP--VCGSELVREEGEVVIRCTNGLNC 431 (667)
T ss_pred HhcCCCCCCEEEEEecCCCCcceeeeecc---------cCCCCCCCCC-CCCCCC--CCCCeeEeccCceeEecCCCCCC
Confidence 3479999999999 58999995 333333 2345555533 222222 57888888766777777775544
Q ss_pred hHHHHhhc
Q 001616 323 WGEMMSSI 330 (1044)
Q Consensus 323 ~gki~~~~ 330 (1044)
-++....+
T Consensus 432 ~aq~~e~l 439 (667)
T COG0272 432 PAQLKERL 439 (667)
T ss_pred hHHHhhhe
Confidence 55555544
No 241
>TIGR00262 trpA tryptophan synthase, alpha subunit. Tryptophan synthase catalyzes the last step in the biosynthesis of tryptophan. The alpha chain is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. In bacteria and plants each domain is found on a separate subunit (alpha and beta chains), while in fungi the two domains are fused together on a single multifunctional protein. The signature pattern for trpA contains three conserved acidic residues. [LIVM]-E-[LIVM]-G-x(2)-[FYC]-[ST]-[DE]-[PA]-[LIVMY]-[AGLI]-[DE]-G and this is located between residues 43-58 of the model. The Sulfolobus solfataricus trpA is known to be quite divergent from other known trpA sequences.
Probab=24.64 E-value=4.4e+02 Score=28.96 Aligned_cols=42 Identities=24% Similarity=0.213 Sum_probs=29.8
Q ss_pred ccCCCchhHHHHHHHHHhcCCE-EEEEcCCC-HHHHHHHHHHcC
Q 001616 662 IKDPCRPGVQKAVEACQSAGVE-IKMITGDN-VFTAKAIATECG 703 (1044)
Q Consensus 662 i~D~lR~~v~~aI~~l~~aGI~-v~mlTGD~-~~tA~aIA~~~G 703 (1044)
+-|.+-++..+.++.|++.|+. +.+++-.. .+..+.+++...
T Consensus 121 ipDlp~ee~~~~~~~~~~~gl~~i~lv~P~T~~eri~~i~~~~~ 164 (256)
T TIGR00262 121 VADLPLEESGDLVEAAKKHGVKPIFLVAPNADDERLKQIAEKSQ 164 (256)
T ss_pred ECCCChHHHHHHHHHHHHCCCcEEEEECCCCCHHHHHHHHHhCC
Confidence 3355557888999999999998 44666655 456667777653
No 242
>PF12304 BCLP: Beta-casein like protein; InterPro: IPR020977 This entry represents eukaryotic proteins that are typically between 216 to 240 amino acids in length which have two conserved sequence motifs: VLR and TRIY. Beta-casein-like protein is associated with cell morphology and a regulation of growth pattern of tumours. It is found in adenocarcinomas of uterine cervical tissues[].
Probab=24.47 E-value=3.6e+02 Score=27.89 Aligned_cols=91 Identities=19% Similarity=0.276 Sum_probs=47.6
Q ss_pred HHHHhhcCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccccCCCCCCcchhHHHHHHHHH
Q 001616 324 GEMMSSISSDSNERTPLQARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVA 403 (1044)
Q Consensus 324 gki~~~~~~~~~~~tplq~~l~~la~~i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (1044)
|...+.+...++..++-..-.|-++-.-+.+++...+..+++ .|+.... .-. ..+-.+.
T Consensus 23 G~VLRhv~~~~~av~~eY~vsNiisv~Sgll~I~~GI~AIvl--Srnl~~~------~L~-------------W~Ll~~S 81 (188)
T PF12304_consen 23 GTVLRHVSNPKDAVTLEYAVSNIISVTSGLLSIICGIVAIVL--SRNLRNR------PLH-------------WTLLVVS 81 (188)
T ss_pred hHHHHhhccccccceehhhHHHHHHHHHHHHHHHHhHHHHhh--hccCCCC------cch-------------HHHHHHH
Confidence 556667766666666655555554444444444333322221 2221110 111 2222333
Q ss_pred HHHHHHHHHhcchhHHHHHHHHHHHHHhhccc
Q 001616 404 AAVTIVVVAIPEGLPLAVTLTLAYSMKRMMTD 435 (1044)
Q Consensus 404 ~ai~ilvvavP~gLplavtl~la~~~~~m~k~ 435 (1044)
..-+++..||-.||.+++.++.+..-++++..
T Consensus 82 ~ln~LlSaAc~vGL~~ai~~Tv~~~Gr~Ll~~ 113 (188)
T PF12304_consen 82 LLNALLSAACAVGLLLAISLTVANQGRNLLAG 113 (188)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCchhHhhc
Confidence 44456777888888888888877776666543
No 243
>PF01455 HupF_HypC: HupF/HypC family; InterPro: IPR001109 The large subunit of [NiFe]-hydrogenase, as well as other nickel metalloenzymes, is synthesised as a precursor devoid of the metalloenzyme active site. This precursor then undergoes a complex post-translational maturation process that requires a number of accessory proteins. The hydrogenase expression/formation proteins (HupF/HypC) form a family of small proteins that are hydrogenase precursor-specific chaperones required for this maturation process []. They are believed to keep the hydrogenase precursor in a conformation accessible for metal incorporation [, ].; PDB: 3D3R_A 2Z1C_C 2OT2_A.
Probab=23.79 E-value=1.6e+02 Score=25.38 Aligned_cols=32 Identities=28% Similarity=0.268 Sum_probs=24.6
Q ss_pred CceEEEEeCCeEEEEeec---ccccCcEEEeCCCC
Q 001616 230 NIKVEVVREARRLQISIF---DLVVGDIVFLKIGD 261 (1044)
Q Consensus 230 ~~~v~ViR~G~~~~I~~~---dLvvGDIV~l~~Gd 261 (1044)
...+.|-.+|..++|+.. ++.|||-|.+..|-
T Consensus 16 ~~~A~v~~~G~~~~V~~~lv~~v~~Gd~VLVHaG~ 50 (68)
T PF01455_consen 16 GGMAVVDFGGVRREVSLALVPDVKVGDYVLVHAGF 50 (68)
T ss_dssp TTEEEEEETTEEEEEEGTTCTSB-TT-EEEEETTE
T ss_pred CCEEEEEcCCcEEEEEEEEeCCCCCCCEEEEecCh
Confidence 456778889999999754 78899999999884
No 244
>PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=23.72 E-value=3.6e+02 Score=30.13 Aligned_cols=79 Identities=22% Similarity=0.275 Sum_probs=42.7
Q ss_pred EEeecChhhHHHHHHHHHh--cCCEEEEEcCCcC-C---HHHHhh--CCcceeeCCCchH-H--HhhccCEEEccCChhH
Q 001616 739 VMARSSPFDKLLMVQCLKK--KGHVVAVTGDGTN-D---APALKE--ADVGLSMGIQGTE-V--AKESSDIVILDDDFTS 807 (1044)
Q Consensus 739 V~ar~sP~~K~~lV~~lq~--~g~vVa~~GDG~N-D---apaLk~--AdVGiamg~~gt~-v--Ak~aaDivl~dd~f~~ 807 (1044)
-|.-|||.-=.++++..+- .|..|.++|.|.. = +-+|.. |.|-++- +-|. . .-..|||++.--.-..
T Consensus 135 ~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~AtVti~h--s~T~~l~~~~~~ADIvV~AvGkp~ 212 (281)
T PRK14183 135 GFVPCTPLGVMELLEEYEIDVKGKDVCVVGASNIVGKPMAALLLNANATVDICH--IFTKDLKAHTKKADIVIVGVGKPN 212 (281)
T ss_pred CCCCCcHHHHHHHHHHcCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeC--CCCcCHHHHHhhCCEEEEecCccc
Confidence 3556777665555555432 3889999999833 2 234544 4444443 3332 2 2467899886432222
Q ss_pred H--HHHHHHhHHHH
Q 001616 808 V--ATVLRWGRCVY 819 (1044)
Q Consensus 808 I--~~~i~~GR~~~ 819 (1044)
+ .+.++.|..+.
T Consensus 213 ~i~~~~vk~gavvI 226 (281)
T PRK14183 213 LITEDMVKEGAIVI 226 (281)
T ss_pred ccCHHHcCCCcEEE
Confidence 2 33455555443
No 245
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=23.41 E-value=4.2e+02 Score=29.32 Aligned_cols=126 Identities=15% Similarity=0.154 Sum_probs=77.1
Q ss_pred EEecccCCCchhHHHHHHHHHhc-CCEEEEEcCCCHHHHHHHHHHcCC--cccccccccceeecchhhhcC---------
Q 001616 658 GIVGIKDPCRPGVQKAVEACQSA-GVEIKMITGDNVFTAKAIATECGI--LRLDQQVEKGEVVEGVEFRNY--------- 725 (1044)
Q Consensus 658 G~vgi~D~lR~~v~~aI~~l~~a-GI~v~mlTGD~~~tA~aIA~~~GI--~~~~~~~~~~~vi~g~~~~~~--------- 725 (1044)
..--...++-++..+.++.|... ...|+++||.+..-......--|| ...+.. ....+.|......
T Consensus 33 ~~~p~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~v~~i~l~aehGa--~~r~~~g~~~~~~~~~~~~~~~ 110 (266)
T COG1877 33 VPHPEAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFGVPGIGLIAEHGA--EVRDPNGKWWINLAEEADLRWL 110 (266)
T ss_pred ccCccccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcCCCCccEEEecce--EEecCCCCeeEecCHHHHhhHH
Confidence 33345567888999999999977 567999999999988887764333 211110 0001122211111
Q ss_pred ---------------------------------CHHHHH-----HH------------hccccEEeecChhhHHHHHHHH
Q 001616 726 ---------------------------------TDEERI-----QK------------VDKIRVMARSSPFDKLLMVQCL 755 (1044)
Q Consensus 726 ---------------------------------~~~~~~-----~~------------~~~~~V~ar~sP~~K~~lV~~l 755 (1044)
.+++.. +. ..+..|-.|.+-..|...++.+
T Consensus 111 ~~v~~~l~~~v~r~pGs~iE~K~~a~~~Hyr~a~~~~~~~~a~~~~~~~~~~~~~~v~~gk~vVEvrp~~~~KG~a~~~i 190 (266)
T COG1877 111 KEVAAILEYYVERTPGSYIERKGFAVALHYRNAEDDEGAALALAEAATLINELKLRVTPGKMVVELRPPGVSKGAAIKYI 190 (266)
T ss_pred HHHHHHHHHHhhcCCCeEEEEcCcEEEEeeccCCchhhHHHHHHHHHhccccccEEEEeCceEEEEeeCCcchHHHHHHH
Confidence 111100 00 0112266676667799999866
Q ss_pred Hhc----CCEEEEEcCCcCCHHHHhhCC----cceeeC
Q 001616 756 KKK----GHVVAVTGDGTNDAPALKEAD----VGLSMG 785 (1044)
Q Consensus 756 q~~----g~vVa~~GDG~NDapaLk~Ad----VGiamg 785 (1044)
.+. |..+.+.||-.-|-.|++..+ ++|-+|
T Consensus 191 ~~~~~~~~~~~~~aGDD~TDE~~F~~v~~~~~~~v~v~ 228 (266)
T COG1877 191 MDELPFDGRFPIFAGDDLTDEDAFAAVNKLDSITVKVG 228 (266)
T ss_pred HhcCCCCCCcceecCCCCccHHHHHhhccCCCceEEec
Confidence 554 445889999999999999887 555556
No 246
>PRK01045 ispH 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Reviewed
Probab=23.32 E-value=1.1e+03 Score=26.71 Aligned_cols=177 Identities=13% Similarity=0.106 Sum_probs=96.3
Q ss_pred EEEEecCcHHHHHHhcccccccCCeeecCChhhHHHHHHHHHHHHhcccceeeeeeeecCchhh---ccc------chHH
Q 001616 574 THIHWKGAAEIILAMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEET---AYN------NDVK 644 (1044)
Q Consensus 574 ~~~~~KGA~e~Il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~~A~k~l~~~~~---~~~------~~~~ 644 (1044)
+.+--.|.|..+.+.... .+-.+..-+=..-.++.+.+.+++.+|+.++.++.+.-++-.. ..+ ...+
T Consensus 69 ViirAHGv~~~~~~~~~~---~g~~viDaTCP~V~k~~~~v~~~~~~Gy~vvi~G~~~HpEv~gi~g~~~~~~~vv~~~~ 145 (298)
T PRK01045 69 VIFSAHGVSPAVREEAKE---RGLTVIDATCPLVTKVHKEVARMSREGYEIILIGHKGHPEVEGTMGQAPGGVYLVESPE 145 (298)
T ss_pred EEEeCCCCCHHHHHHHHH---CCCeEEeCCCccchHHHHHHHHHHhCCCEEEEEeCCCCCeeeeeccCcCCCEEEEcCHH
Confidence 333345887777665442 1112333333445678899999999999999999876553110 000 0000
Q ss_pred HhhhhcccCeEEEEEecccCCCchhHHHHHHHHHhcCCE--------EEEEcCCCHHHHHHHHHHcCCccccccccccee
Q 001616 645 ARQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVE--------IKMITGDNVFTAKAIATECGILRLDQQVEKGEV 716 (1044)
Q Consensus 645 ~~~~~~e~~l~llG~vgi~D~lR~~v~~aI~~l~~aGI~--------v~mlTGD~~~tA~aIA~~~GI~~~~~~~~~~~v 716 (1044)
........+..=++++.=-=-.+++..+.++.+++..-. +...|-+....++.+|+++...-
T Consensus 146 e~~~l~~~~~~~v~vvsQTT~~~~~~~~i~~~l~~~~~~~~v~~~nTIC~aT~~RQ~a~~~La~~vD~mi---------- 215 (298)
T PRK01045 146 DVAKLEVKDPDKLALVTQTTLSVDDTAEIIAALKERFPEIQGPPKDDICYATQNRQEAVKELAPQADLVI---------- 215 (298)
T ss_pred HHhhcccCCCCcEEEEEcCCCcHHHHHHHHHHHHHhCcCcccCCCCCcchhhHHHHHHHHHHHhhCCEEE----------
Confidence 111111011223555554455566667777777655422 24466677777777777665431
Q ss_pred ecchhhhcCCHHHHHHHhccccEEeecChhhHHHHHHHHHhcCCEEEEEcCCc-CCHHHHh-hCCcceeeC
Q 001616 717 VEGVEFRNYTDEERIQKVDKIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGT-NDAPALK-EADVGLSMG 785 (1044)
Q Consensus 717 i~g~~~~~~~~~~~~~~~~~~~V~ar~sP~~K~~lV~~lq~~g~vVa~~GDG~-NDapaLk-~AdVGiamg 785 (1044)
|.+.-....-.+|.+..++.|..+-.+.+-. -|...|+ ...|||.-|
T Consensus 216 ----------------------VVGg~~SsNT~kL~~i~~~~~~~t~~Ie~~~el~~~~l~~~~~VGitaG 264 (298)
T PRK01045 216 ----------------------VVGSKNSSNSNRLREVAEEAGAPAYLIDDASEIDPEWFKGVKTVGVTAG 264 (298)
T ss_pred ----------------------EECCCCCccHHHHHHHHHHHCCCEEEECChHHCcHHHhcCCCEEEEEec
Confidence 3333333344456777777776666665421 2444565 346888877
No 247
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=23.29 E-value=1.9e+03 Score=29.40 Aligned_cols=36 Identities=17% Similarity=0.311 Sum_probs=28.7
Q ss_pred ccCcEEEeCCCCeeeccEEEEe---cCceeeecCCCCCC
Q 001616 250 VVGDIVFLKIGDQIPADGLFLD---GHSLQVDESSMTGE 285 (1044)
Q Consensus 250 vvGDIV~l~~Gd~VPADgill~---g~~l~VDES~LTGE 285 (1044)
+-|....+...|.+|-|.++++ |..+-+|=-.+.|+
T Consensus 235 Rdg~~~~I~s~eLvpGDiv~l~~~~g~~iPaD~~ll~g~ 273 (1054)
T TIGR01657 235 RNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLSGS 273 (1054)
T ss_pred ECCEEEEEEcccCCCCCEEEEecCCCCEecceEEEEeCc
Confidence 4588999999999999999997 55555666666673
No 248
>PRK01906 tetraacyldisaccharide 4'-kinase; Provisional
Probab=23.22 E-value=1.5e+02 Score=33.99 Aligned_cols=59 Identities=22% Similarity=0.363 Sum_probs=39.1
Q ss_pred HHHHHHHHhcCCEEEEEc--CC-----------------cCCHHHHhhC--CcceeeCCCchHHH----h--hccCEEEc
Q 001616 749 LLMVQCLKKKGHVVAVTG--DG-----------------TNDAPALKEA--DVGLSMGIQGTEVA----K--ESSDIVIL 801 (1044)
Q Consensus 749 ~~lV~~lq~~g~vVa~~G--DG-----------------~NDapaLk~A--dVGiamg~~gt~vA----k--~aaDivl~ 801 (1044)
..+++.|+++|..++++- -| +.|-|.|-+- ++-+.+|.+-.+.+ + ..+|++|+
T Consensus 76 ~~La~~l~~~G~~~~IlSRGYg~~~~~~~~v~~~~~~~~~GDEpllla~~~~~~V~V~~dR~~aa~~l~~~~~~~dviIl 155 (338)
T PRK01906 76 IALVDALRAAGFTPGVVSRGYGAKIKHPTAVTPASRASDAGDEPLLIARRTDAPVWVCPDRVAAAQALLAAHPGVDVIVS 155 (338)
T ss_pred HHHHHHHHHcCCceEEEecCCCCCCCCCeEEcCCCChhhhCcHHHHhhhcCCCeEEEeCcHHHHHHHHHHhCCCCCEEEE
Confidence 456788888898888874 33 2577766433 56666664333322 2 25899999
Q ss_pred cCChhH
Q 001616 802 DDDFTS 807 (1044)
Q Consensus 802 dd~f~~ 807 (1044)
||.|..
T Consensus 156 DDGfQH 161 (338)
T PRK01906 156 DDGLQH 161 (338)
T ss_pred CCCCcc
Confidence 999997
No 249
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=22.49 E-value=29 Score=37.82 Aligned_cols=7 Identities=43% Similarity=0.786 Sum_probs=0.0
Q ss_pred cCCCCCC
Q 001616 883 QRPPVGR 889 (1044)
Q Consensus 883 ~~~P~~~ 889 (1044)
+|||+.+
T Consensus 13 ~r~pr~p 19 (381)
T PF05297_consen 13 RRPPRCP 19 (381)
T ss_dssp -------
T ss_pred CCCCCCC
Confidence 3566543
No 250
>PRK14042 pyruvate carboxylase subunit B; Provisional
Probab=22.34 E-value=3.5e+02 Score=33.62 Aligned_cols=127 Identities=15% Similarity=0.133 Sum_probs=83.3
Q ss_pred hcccCeEEEE----EecccCCCchhHHHHHHHHHhcCCEE-EEEcC----CCHHHHHHHHHHcCCcccccccccceeecc
Q 001616 649 LKEEGLTLLG----IVGIKDPCRPGVQKAVEACQSAGVEI-KMITG----DNVFTAKAIATECGILRLDQQVEKGEVVEG 719 (1044)
Q Consensus 649 ~~e~~l~llG----~vgi~D~lR~~v~~aI~~l~~aGI~v-~mlTG----D~~~tA~aIA~~~GI~~~~~~~~~~~vi~g 719 (1044)
.+...+..+- ++|...-+++=+...++...+.||.+ ++++. ||...+...++++|.... ..++.++
T Consensus 73 ~pnt~lqmL~Rg~N~vGy~~~~d~vv~~~v~~a~~~Gidv~Rifd~lnd~~n~~~~i~~~k~~G~~~~-----~~i~yt~ 147 (596)
T PRK14042 73 LPNTQLSMLLRGQNLLGYRNYADDVVRAFVKLAVNNGVDVFRVFDALNDARNLKVAIDAIKSHKKHAQ-----GAICYTT 147 (596)
T ss_pred CCCCceEEEeccccccccccCChHHHHHHHHHHHHcCCCEEEEcccCcchHHHHHHHHHHHHcCCEEE-----EEEEecC
Confidence 3455667777 88898888888999999999999984 55554 467788889999998653 3445555
Q ss_pred hhhhcCCHHHHHHHhcccc-----------EEeecChhhHHHHHHHHHhc-CCEEEEEcC---CcCCHHHHhhCCcce
Q 001616 720 VEFRNYTDEERIQKVDKIR-----------VMARSSPFDKLLMVQCLKKK-GHVVAVTGD---GTNDAPALKEADVGL 782 (1044)
Q Consensus 720 ~~~~~~~~~~~~~~~~~~~-----------V~ar~sP~~K~~lV~~lq~~-g~vVa~~GD---G~NDapaLk~AdVGi 782 (1044)
.. ..+.+.+.+....+. -..-++|.+=.++|+.+++. +-.+.+=+. |.--+.+|++++-|+
T Consensus 148 sp--~~t~e~~~~~ak~l~~~Gad~I~IkDtaG~l~P~~v~~lv~alk~~~~ipi~~H~Hnt~Gla~an~laAieaGa 223 (596)
T PRK14042 148 SP--VHTLDNFLELGKKLAEMGCDSIAIKDMAGLLTPTVTVELYAGLKQATGLPVHLHSHSTSGLASICHYEAVLAGC 223 (596)
T ss_pred CC--CCCHHHHHHHHHHHHHcCCCEEEeCCcccCCCHHHHHHHHHHHHhhcCCEEEEEeCCCCCcHHHHHHHHHHhCC
Confidence 33 334444433332211 23567999999999999975 444444222 222345566666665
No 251
>PF07302 AroM: AroM protein; InterPro: IPR010843 This family consists of several bacterial and archaeal AroM proteins. In Escherichia coli the aroM gene is cotranscribed with aroL []. The function of this family is unknown.
Probab=22.29 E-value=94 Score=33.32 Aligned_cols=30 Identities=20% Similarity=0.403 Sum_probs=24.4
Q ss_pred cCCCchhHHHHHHHHHhcCCE--EEEEcCCCH
Q 001616 663 KDPCRPGVQKAVEACQSAGVE--IKMITGDNV 692 (1044)
Q Consensus 663 ~D~lR~~v~~aI~~l~~aGI~--v~mlTGD~~ 692 (1044)
+..+.+...+.|+.|.+.|+. +.|+||+-.
T Consensus 69 ~~~v~~~lq~~i~~le~~G~d~illlCTG~F~ 100 (221)
T PF07302_consen 69 KKKVEPRLQACIAQLEAQGYDVILLLCTGEFP 100 (221)
T ss_pred HHHHHHHHHHHHHHHHHCCCCEEEEeccCCCC
Confidence 556678889999999999887 667899844
No 252
>PRK15424 propionate catabolism operon regulatory protein PrpR; Provisional
Probab=22.16 E-value=7.4e+02 Score=30.44 Aligned_cols=70 Identities=20% Similarity=0.171 Sum_probs=48.2
Q ss_pred hHHHHHHHHHhcCCEEEEEcCCCHH-HHHHHHHHcCCcccccccccceeecchhhhcCCHHHHHHHhccccEEeecChhh
Q 001616 669 GVQKAVEACQSAGVEIKMITGDNVF-TAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPFD 747 (1044)
Q Consensus 669 ~v~~aI~~l~~aGI~v~mlTGD~~~-tA~aIA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~ar~sP~~ 747 (1044)
|+-.++..+++.+=++.+++=.+.. .+..++.-+|+. +..+.-.++++
T Consensus 95 Dil~al~~a~~~~~~iavv~~~~~~~~~~~~~~~l~~~-------------------------------i~~~~~~~~~e 143 (538)
T PRK15424 95 DVMQALARARKLTSSIGVVTYQETIPALVAFQKTFNLR-------------------------------IEQRSYVTEED 143 (538)
T ss_pred HHHHHHHHHHhcCCcEEEEecCcccHHHHHHHHHhCCc-------------------------------eEEEEecCHHH
Confidence 4667777777776677777666543 344455555543 23677788999
Q ss_pred HHHHHHHHHhcCCEEEEEcCCcC
Q 001616 748 KLLMVQCLKKKGHVVAVTGDGTN 770 (1044)
Q Consensus 748 K~~lV~~lq~~g~vVa~~GDG~N 770 (1044)
=...|+.+++.|.. +++||++-
T Consensus 144 ~~~~v~~lk~~G~~-~vvG~~~~ 165 (538)
T PRK15424 144 ARGQINELKANGIE-AVVGAGLI 165 (538)
T ss_pred HHHHHHHHHHCCCC-EEEcCchH
Confidence 99999999999965 46799753
No 253
>PRK08508 biotin synthase; Provisional
Probab=21.54 E-value=4.5e+02 Score=29.23 Aligned_cols=20 Identities=10% Similarity=0.061 Sum_probs=14.0
Q ss_pred cChhhHHHHHHHHHhcCCEE
Q 001616 743 SSPFDKLLMVQCLKKKGHVV 762 (1044)
Q Consensus 743 ~sP~~K~~lV~~lq~~g~vV 762 (1044)
.+++++.+.++..++.|-.|
T Consensus 134 ~~~~~~l~~i~~a~~~Gi~v 153 (279)
T PRK08508 134 HTWEERFQTCENAKEAGLGL 153 (279)
T ss_pred CCHHHHHHHHHHHHHcCCee
Confidence 46677777777777776544
No 254
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=21.49 E-value=1.3e+03 Score=28.74 Aligned_cols=18 Identities=17% Similarity=0.016 Sum_probs=9.2
Q ss_pred HHHHHHHHHHHHHhhhcc
Q 001616 1004 IAMAAFTWPIGWAVKFIP 1021 (1044)
Q Consensus 1004 i~~~~~~~~~~~~~k~i~ 1021 (1044)
+...+.+++++.+.+.++
T Consensus 360 fg~~~g~~i~g~l~~~ir 377 (599)
T PF06609_consen 360 FGSCAGAVILGLLFSKIR 377 (599)
T ss_pred HHHHHHHHHHHHHHHHcc
Confidence 333444455566666554
No 255
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=21.39 E-value=1.4e+02 Score=30.55 Aligned_cols=41 Identities=17% Similarity=0.195 Sum_probs=31.8
Q ss_pred CCchhHHHHHHHHHhcCCEEEEEc-CCCHHHHHHHHHHcCCc
Q 001616 665 PCRPGVQKAVEACQSAGVEIKMIT-GDNVFTAKAIATECGIL 705 (1044)
Q Consensus 665 ~lR~~v~~aI~~l~~aGI~v~mlT-GD~~~tA~aIA~~~GI~ 705 (1044)
.+-|+|+++++.|++.|+++-+.| -|.+..|+.+=+.++|.
T Consensus 45 ~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~ 86 (169)
T PF12689_consen 45 SLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEID 86 (169)
T ss_dssp ---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C
T ss_pred EeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCC
Confidence 356999999999999999999999 58899999999999997
No 256
>PF15584 Imm44: Immunity protein 44
Probab=21.08 E-value=40 Score=30.56 Aligned_cols=19 Identities=32% Similarity=0.646 Sum_probs=15.2
Q ss_pred cCcEEEeCCCCeeeccEEE
Q 001616 251 VGDIVFLKIGDQIPADGLF 269 (1044)
Q Consensus 251 vGDIV~l~~Gd~VPADgil 269 (1044)
+.+-..++.|++||||||-
T Consensus 13 ~~~~~~I~SG~~iP~~GIw 31 (94)
T PF15584_consen 13 PSEGGVIKSGQEIPCDGIW 31 (94)
T ss_pred CCCCCEEecCCCcccCCeE
Confidence 3455678899999999985
No 257
>PLN02389 biotin synthase
Probab=20.92 E-value=8.4e+02 Score=28.52 Aligned_cols=78 Identities=18% Similarity=0.188 Sum_probs=45.2
Q ss_pred chhHHHHHHHHHhcCCEEEEEcCCCHHHHHHHHHHcCCcccccccccceeecchhhhcCCHHHHHHHhccccEEeecChh
Q 001616 667 RPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPF 746 (1044)
Q Consensus 667 R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~V~ar~sP~ 746 (1044)
.+.+.+.++.+++.|+.+..-.|--......-=++.|+..- ...+++ +++ ..++ +.+.-+++
T Consensus 152 ~e~i~eiir~ik~~~l~i~~s~G~l~~E~l~~LkeAGld~~------~~~LeT------s~~----~y~~--i~~~~s~e 213 (379)
T PLN02389 152 FNQILEYVKEIRGMGMEVCCTLGMLEKEQAAQLKEAGLTAY------NHNLDT------SRE----YYPN--VITTRSYD 213 (379)
T ss_pred HHHHHHHHHHHhcCCcEEEECCCCCCHHHHHHHHHcCCCEE------EeeecC------ChH----HhCC--cCCCCCHH
Confidence 35666777777766777665566544444444445666531 111111 111 1222 23455899
Q ss_pred hHHHHHHHHHhcCCEE
Q 001616 747 DKLLMVQCLKKKGHVV 762 (1044)
Q Consensus 747 ~K~~lV~~lq~~g~vV 762 (1044)
++.+.++.+++.|-.|
T Consensus 214 ~rl~ti~~a~~~Gi~v 229 (379)
T PLN02389 214 DRLETLEAVREAGISV 229 (379)
T ss_pred HHHHHHHHHHHcCCeE
Confidence 9999999999998766
No 258
>PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=20.85 E-value=4.8e+02 Score=29.36 Aligned_cols=79 Identities=16% Similarity=0.208 Sum_probs=41.6
Q ss_pred EEeecChhhHHHHHHHHHh--cCCEEEEEcCCcC----CHHHHhhCCcceeeCCCchH---HHhhccCEEEccC---Chh
Q 001616 739 VMARSSPFDKLLMVQCLKK--KGHVVAVTGDGTN----DAPALKEADVGLSMGIQGTE---VAKESSDIVILDD---DFT 806 (1044)
Q Consensus 739 V~ar~sP~~K~~lV~~lq~--~g~vVa~~GDG~N----DapaLk~AdVGiamg~~gt~---vAk~aaDivl~dd---~f~ 806 (1044)
-|.-|||.-=.++++...- .|..|+++|-+.. =+-+|...|--+.+-.+-|. ..-..|||++.-- +|-
T Consensus 138 ~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVt~chs~T~~l~~~~~~ADIvVsAvGkp~~i 217 (294)
T PRK14187 138 CLIPCTPKGCLYLIKTITRNLSGSDAVVIGRSNIVGKPMACLLLGENCTVTTVHSATRDLADYCSKADILVAAVGIPNFV 217 (294)
T ss_pred CccCcCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHhhCCCEEEEeCCCCCCHHHHHhhCCEEEEccCCcCcc
Confidence 4566777766666655432 3888999998743 12345444433333222232 1235688877532 332
Q ss_pred HHHHHHHHhHHH
Q 001616 807 SVATVLRWGRCV 818 (1044)
Q Consensus 807 ~I~~~i~~GR~~ 818 (1044)
. .+.+++|.-+
T Consensus 218 ~-~~~ik~gaiV 228 (294)
T PRK14187 218 K-YSWIKKGAIV 228 (294)
T ss_pred C-HHHcCCCCEE
Confidence 2 3345555544
No 259
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=20.83 E-value=5.5e+02 Score=28.39 Aligned_cols=41 Identities=17% Similarity=0.164 Sum_probs=23.4
Q ss_pred cCCCchhHHHHHHHHHhcCCE-EEEEcCCC-HHHHHHHHHHcC
Q 001616 663 KDPCRPGVQKAVEACQSAGVE-IKMITGDN-VFTAKAIATECG 703 (1044)
Q Consensus 663 ~D~lR~~v~~aI~~l~~aGI~-v~mlTGD~-~~tA~aIA~~~G 703 (1044)
-|-+=++..+.++.|++.|+. +.++|-.. .+.-+.|++.+.
T Consensus 126 pDLP~ee~~~~~~~~~~~gi~~I~lv~PtT~~eri~~i~~~a~ 168 (263)
T CHL00200 126 PDLPYEESDYLISVCNLYNIELILLIAPTSSKSRIQKIARAAP 168 (263)
T ss_pred cCCCHHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHhCC
Confidence 343445666667777777765 55555554 345555665553
No 260
>PF02219 MTHFR: Methylenetetrahydrofolate reductase; InterPro: IPR003171 This family includes the 5,10-methylenetetrahydrofolate reductase 1.7.99.5 from EC from bacteria and methylenetetrahydrofolate reductase 1.5.1.20 from EC from eukaryotes. The structure for this domain is known [] to be a TIM barrel.; GO: 0004489 methylenetetrahydrofolate reductase (NADPH) activity, 0006555 methionine metabolic process, 0055114 oxidation-reduction process; PDB: 3IJD_B 1B5T_B 3FSU_C 1ZPT_C 2FMO_B 3FST_C 2FMN_C 1ZP3_A 1ZP4_B 1ZRQ_B ....
Probab=20.44 E-value=3e+02 Score=30.75 Aligned_cols=44 Identities=23% Similarity=0.340 Sum_probs=34.6
Q ss_pred ccCeEEEEEecccCCCchhHHHHHHHHHhcCCE-EEEEcCCCHHH
Q 001616 651 EEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVE-IKMITGDNVFT 694 (1044)
Q Consensus 651 e~~l~llG~vgi~D~lR~~v~~aI~~l~~aGI~-v~mlTGD~~~t 694 (1044)
+.++..+.=+..+|.=|.+..+-+..++++||+ |..+|||.+..
T Consensus 68 ~~g~~~i~Hlt~rd~n~~~l~~~L~~~~~~Gi~niL~l~GD~~~~ 112 (287)
T PF02219_consen 68 ETGIEPIPHLTCRDRNREALQSDLLGAHALGIRNILALTGDPPKG 112 (287)
T ss_dssp HTT--EEEEEESTTSBHHHHHHHHHHHHHTT--EEEEESS-TSTT
T ss_pred HhCCceEEeecccCCCHHHHHHHHHHHHHcCCCeEEEecCCCCCC
Confidence 458888999999999999999999999999997 99999998743
Done!