Query 001616
Match_columns 1044
No_of_seqs 440 out of 3207
Neff 7.7
Searched_HMMs 29240
Date Tue Mar 26 15:52:43 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/001616.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_915-919//hhsearch_pdb/001616hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ixz_A Potassium-transporting 1.0 1 1 1256.0 92.5 880 112-1022 56-1021(1034)
2 2zxe_A Na, K-ATPase alpha subu 1.0 1 1 1247.3 81.9 880 111-1021 50-1014(1028)
3 3ar4_A Sarcoplasmic/endoplasmi 1.0 1 1 1234.5 88.1 887 112-1021 8-989 (995)
4 1mhs_A Proton pump, plasma mem 1.0 1 1 1129.1 62.7 839 88-1034 40-891 (920)
5 3b8c_A ATPase 2, plasma membra 1.0 1 1 1093.0 -15.0 811 113-1022 18-842 (885)
6 3rfu_A Copper efflux ATPase; a 1.0 1 1 737.9 47.1 580 153-872 130-731 (736)
7 3j09_A COPA, copper-exporting 1.0 1 1 712.8 43.8 531 193-874 173-713 (723)
8 3j08_A COPA, copper-exporting 1.0 1 1 704.2 43.0 532 192-874 94-635 (645)
9 2yj3_A Copper-transporting ATP 1.0 1 1 254.3 0.0 260 427-825 4-263 (263)
10 3a1c_A Probable copper-exporti 1.0 1 1 212.0 24.6 280 427-823 8-287 (287)
No 1
>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A
Probab=1.00 E-value=1 Score=1255.95 Aligned_cols=880 Identities=25% Similarity=0.374 Sum_probs=752.7
Q ss_pred CCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC---C-
Q ss_conf 899999988299968999968798999995329985799999839999999954568999999999988201245---7-
Q 001616 112 GGVEGVANALGTNPEYGINGNDEDVSRRSQLFGANTYHKPPPKGLLHFVLEAFKDTTILILLVCAALSLGFGIKE---H- 187 (1044)
Q Consensus 112 ggv~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~il~v~a~isl~~g~~~---~- 187 (1044)
-.++++.+.|+|++.+||+.++ +.+|+++||+|++++++++++|+.++++|.+++.++|+++++++++.+... .
T Consensus 56 ~~~~~~~~~l~~~~~~GLs~~e--a~~rl~~~G~N~l~~~~~~~~~~~~~~q~~~~~~~il~~aa~~~~~~~~~~~~~~~ 133 (1034)
T 3ixz_A 56 LSVAELEQKYQTSATKGLSASL--AAELLLRDGPNALRPPRGTPEYVKFARQLAGGLQCLMWVAAAICLIAFAIQASEGD 133 (1034)
T ss_pred CCHHHHHHHHCCCCCCCCCHHH--HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 9999999985979121979999--99999850999899989998899999998473899999999999999987403477
Q ss_pred -CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCEEEEEEECCCCCCCEEEECCCCEEECC
Q ss_conf -9876533025788999999999678999999999896110279537999699699976056444919995799955021
Q 001616 188 -GAEEGWYEGGSIFVAVFLVIVVSAFSNFRQARQFDKLSKISNNIKVEVVREARRLQISIFDLVVGDIVFLKIGDQIPAD 266 (1044)
Q Consensus 188 -~~~~~~~d~~~i~~~v~lv~~v~a~~~~~~~~~~~~l~~~~~~~~v~ViR~G~~~~I~~~dLvvGDIV~l~~Gd~VPAD 266 (1044)
.....|++++.|++.+++..+++.+++++.++..++|.+. .+..++|+|||++++|++.||||||||.|++||+||||
T Consensus 134 ~~~~~~~~~~~~i~~vv~i~~~~~~~qe~ka~~al~~L~~l-~~~~a~ViRdG~~~~I~~~eLv~GDiV~l~~Gd~VPAD 212 (1034)
T 3ixz_A 134 LTTDDNLYLALALIAVVVVTGCFGYYQEFKSTNIIASFKNL-VPQQATVIRDGDKFQINADQLVVGDLVEMKGGDRVPAD 212 (1034)
T ss_pred CCCCCCHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHCC-CCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEECCC
T ss_conf 76544205642430132279999999999999999997624-89735999999899988898798858998579643587
Q ss_pred EEEEECCCEEEECCCCCCCCCCEEECCC--------CCCEEEECCEEEECCEEEEEEEECCCCHHHHHHHHCCCCCCCCC
Q ss_conf 7998427313416778899980430599--------99616604167527068999896461446789750378998889
Q 001616 267 GLFLDGHSLQVDESSMTGESDHVEVDST--------NNPFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSSISSDSNERT 338 (1044)
Q Consensus 267 gili~g~~l~VDeS~LTGEs~pv~k~~~--------~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~t 338 (1044)
|++++|+++.||||+|||||.|+.|.+. ..+.+|+||.+.+|.+.++|++||.+|++|++++++...+.+++
T Consensus 213 ~~ll~~~~l~VdES~LTGES~pv~K~~~~~~~~~~~~~n~~f~GT~v~~G~~~~vVv~tG~~T~~GkI~~~~~~~~~~~t 292 (1034)
T 3ixz_A 213 IRILQAQGRKVDNSSLTGESEPQTRSPECTHESPLETRNIAFFSTMCLEGTAQGLVVNTGDRTIIGRIASLASGVENEKT 292 (1034)
T ss_pred EEEEEECCCEEEECCCCCCCCCEECCCCCCCCCCCCCCCCEECCEEEEEECCEEEEEEEHHHHHHHHHHHHHCCCCCCCC
T ss_conf 69997088058833667887776655777665632344512204069860424999960254374089986203566789
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHH
Q ss_conf 35999999999999999999999999999999832778888842347998872014889999999999999988134147
Q 001616 339 PLQARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAAAVTIVVVAIPEGLP 418 (1044)
Q Consensus 339 plq~~l~~la~~i~~~~l~~a~i~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~ilvvaiP~gLp 418 (1044)
|+|+++++++..+..+++.+++++|++++. .+. .+...+..++++++++||||||
T Consensus 293 pl~~~~~~~~~~l~~~~~~~~~~~~~~~~~---~~~----------------------~~~~~~~~~i~l~v~~iPe~Lp 347 (1034)
T 3ixz_A 293 PIAIEIEHFVDIIAGLAILFGATFFIVAMC---IGY----------------------TFLRAMVFFMAIVVAYVPEGLL 347 (1034)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HCC----------------------HHHHHHHHHHHHHHHEECCCCH
T ss_conf 189999999999999999999999999999---641----------------------2999999999998820266508
Q ss_pred HHHHHHHHHHHHHHCCCCCEECCCHHHHCCCCEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCC-------CCCHHH
Q ss_conf 9999999999876214610003661111135705784075232235853999999415321132101-------479379
Q 001616 419 LAVTLTLAYSMKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKFWLGQESIVQETYC-------KIASSI 491 (1044)
Q Consensus 419 lavtl~la~s~~~l~k~~~lvr~~~a~E~lG~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~-------~~~~~~ 491 (1044)
+++|+++++++++|.++|++||+++++|+||++++||||||||||+|+|+|.++|+++..+..+... ......
T Consensus 348 ~~vti~la~~~~rmak~~~lvr~l~avE~LG~v~~IcsDKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (1034)
T 3ixz_A 348 ATVTVCLSLTAKRLASKNCVVKNLEAVETLGSTSVICSDKTGTLTQNRMTVSHLWFDNHIHSADTTEDQSGQTFDQSSET 427 (1034)
T ss_pred HHHHHHHHHHHHHHHHCCEEECCHHHHHHHCCCCEEECCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCHH
T ss_conf 99999999999987338828647678886158729972897872368379999997795122567666566556767789
Q ss_pred HHHHHHHHHHCCCCCCCCCCC--CCCCCEECCCHHHHHHHHHHHHHCCCCHHHHHHCCCEEEEECCCCCCCEEEEEEEEC
Q ss_conf 999999973217751001589--998530038925899999999981987577631041789846889986389999746
Q 001616 492 RDLFHQGVGLNTTGSVSKLKP--GSSVAEFSGSPTEKAVLSWAVLEMGMEMDKVKQKYSILHVETFNSEKKRSGVLIRRK 569 (1044)
Q Consensus 492 ~~~l~~~i~ln~~~~~~~~~~--~~~~~~~~g~p~e~All~~a~~~~g~~~~~~~~~~~il~~~~F~s~~krmsvvv~~~ 569 (1044)
...+....++|+.+......+ ........|+|+|.|++.++. ..+.+....++.++.++.+||+|+||+|+++++..
T Consensus 428 ~~~l~~~~~lc~~a~~~~~~~~~~~~~~~~~gdp~e~All~~~~-~~~~~~~~~~~~~~~~~~~pF~s~rk~m~~v~~~~ 506 (1034)
T 3ixz_A 428 WRALCRVLTLCNRAAFKSGQDAVPVPKRIVIGDASETALLKFSE-LTLGNAMGYRERFPKVCEIPFNSTNKFQLSIHTLE 506 (1034)
T ss_pred HHHHHHHHHHHCCCEECCCCCCCCCCCCEECCCCHHHHHHHHHH-HHCCCHHHHHHHCCCEEEEEECCCCCEEEEEEEEC
T ss_conf 99999998871626653576777665743554925999999999-85788688897486069950357772689999833
Q ss_pred C--CCEEEEEECCCHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHCCCCHH-HHH
Q ss_conf 9--9818999638278999720312235990503895559999999999975012001035621470111143017-875
Q 001616 570 A--DNTTHIHWKGAAEIILAMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAYNNDV-KAR 646 (1044)
Q Consensus 570 ~--~~~~~~~~KGa~e~Il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~~A~k~l~~~~~~~~~~~-~~~ 646 (1044)
+ ++++++++|||||.|+++|+++.. +|...+++++.++.+.+.++.++.+|+|++++|||++++++....... ...
T Consensus 507 ~~~~~~~~l~~KGApe~il~~c~~~~~-~~~~~~l~~~~~~~~~~~~~~~a~~G~RvLa~A~~~l~~~~~~~~~~~~~~~ 585 (1034)
T 3ixz_A 507 DPRDPRHVLVMKGAPERVLERCSSILI-KGQELPLDEQWREAFQTAYLSLGGLGERVLGFCQLYLSEKDYPPGYAFDVEA 585 (1034)
T ss_pred CCCCCCEEEEEECCHHHHHHHHHHHHC-CCCEECCCHHHHHHHHHHHHHHHHCCCHHHEEEEEECCHHHCCCCCCCCHHH
T ss_conf 788860899996884999997377552-8964019999999999999998714758236867855800043211245344
Q ss_pred HHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCC----------------
Q ss_conf 4200269089997334599952179999999966978999948998889999999098666665----------------
Q 001616 647 QRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQ---------------- 710 (1044)
Q Consensus 647 ~~~~e~~l~llGiigi~DplR~~v~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~~GI~~~~~~---------------- 710 (1044)
.+..|+|++|+|+++++||+||+++++|+.|+++||+|+|+|||+..||++||++|||..++..
T Consensus 586 ~~~~e~~l~~lGlv~i~Dp~r~~~~~aI~~l~~aGI~vvmiTGd~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~ 665 (1034)
T 3ixz_A 586 MNFPTSGLSFAGLVSMIDPPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASVGIISEGSETVEDIAARLRVPVDQV 665 (1034)
T ss_pred HHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHC
T ss_conf 30222486798887136887065999999999869969999699779999999986999887247888887617650002
Q ss_pred ---CCCCEEECCHHHHCCCHHHHHHHHCCCC--EEEECCHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCCCEEEC
Q ss_conf ---6553243025330489899999740211--78412943299999999865999999939958988874189216507
Q 001616 711 ---VEKGEVVEGVEFRNYTDEERIQKVDKIR--VMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMG 785 (1044)
Q Consensus 711 ---~~~~~vi~G~~~~~~~~~~~~~~~~~~~--V~ar~sP~~K~~lV~~Lq~~g~vVa~iGDG~NDapaLk~AdVGiamg 785 (1044)
.....+++|.++..+.++++.+.+.+.. +|+|++|+||.++|+.+|+.|++|+|+|||.||+|||++||+|||||
T Consensus 666 ~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~v~ar~~P~~K~~iv~~lq~~g~~V~a~GDG~ND~~mLk~A~vGIAMg 745 (1034)
T 3ixz_A 666 NRKDARACVINGMQLKDMDPSELVEALRTHPEMVFARTSPQQKLVIVESCQRLGAIVAVTGDGVNDSPALKKADIGVAMG 745 (1034)
T ss_pred CCCCCCEEEEECHHHHHCCHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHCCEEEEEC
T ss_conf 54454316771676663899999999873782699966989999999999976999999879577699999789329807
Q ss_pred CCCHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
Q ss_conf 88608886406889716990589999999688878479999999999999999999999945998456999999863456
Q 001616 786 IQGTEVAKESSDIVILDDDFTSVATVLRWGRCVYTNIQKFIQFQLTVNVAALVINFIAAVSAGEVPLTAVQLLWVNLIMD 865 (1044)
Q Consensus 786 ~~gt~vAk~aaDivlldd~f~sI~~~i~~GR~~~~nI~k~i~f~l~~Nv~~~~~~~~~~~~~~~~pl~~vqlL~vnli~d 865 (1044)
++|+++||++||+++.||||.+|+.++++||++|+||+|+++|++++|+..++..+++.+++.+.||+++|+||+|+++|
T Consensus 746 ~ng~d~aK~aAD~Vl~~~~~~gI~~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qiL~inl~~d 825 (1034)
T 3ixz_A 746 IAGSDAAKNAADMILLDDNFASIVTGVEQGRLIFDNLKKSIAYTLTKNIPELTPYLIYITVSVPLPLGCITILFIELCTD 825 (1034)
T ss_pred CCCCHHHHHHCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 75679999854999666883399999999889999999999999999999999999999982146689999999999988
Q ss_pred HHHHHHHCCCCCCCCCCCCCCCCC-CCCCCCHHHHHHHHHH-HHHHHHHHHHHHHHCC--------CCCCCC--------
Q ss_conf 898878156899920104999999-9996369999999999-9999999999997401--------235889--------
Q 001616 866 TLGALALATDRPTDELMQRPPVGR-TEPLITNIMWRNLLSQ-ALYQITILLILQFKGE--------SIFNVS-------- 927 (1044)
Q Consensus 866 ~l~alala~e~p~~~lm~r~P~~r-~~~li~~~m~~~i~~~-~~~q~~v~~~l~~~~~--------~~~~~~-------- 927 (1044)
++|+++|++|||++++|+|||+.+ +++++++.++..++++ ++++.+..+..+|... .+++..
T Consensus 826 ~~palal~~e~~~~~~m~~~Pr~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 905 (1034)
T 3ixz_A 826 IFPSVSLAYEKAESDIMHLRPRNPKRDRLVNEPLAAYSYFQIGAIQSFAGFTDYFTAMAQEGWFPLLCVGLRPQWENHHL 905 (1034)
T ss_pred HHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
T ss_conf 88888851688973266479989753445578899999999999999999999999996367762000011122233444
Q ss_pred -------------------CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC-CCCCCHHHHHHHHHHHHHHHHH--HHH
Q ss_conf -------------------554331235599999998876541246544333-5654077999999999999999--898
Q 001616 928 -------------------PEVNDTLIFNTFVFCQVFNEFNARKLEKRNVFK-GIHKNKLFLGIIGITVVLQVVM--VEF 985 (1044)
Q Consensus 928 -------------------~~~~~t~~f~~fv~~qifn~~n~r~~~~~~~f~-~~~~n~~f~~~i~~~~~~q~~~--v~~ 985 (1044)
....+|+.|+++|++|+||.+|||.. +.++|+ ++++|+++++++++++++|+++ +++
T Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~lv~~q~~~~~~~r~~-~~s~~~~~~~~N~~l~~~~~~~~~l~~~~~~~p~ 984 (1034)
T 3ixz_A 906 QDLQDSYGQEWTFGQRLYQQYTCYTVFFISIEMCQIADVLIRKTR-RLSAFQQGFFRNRILVIAIVFQVCIGCFLCYCPG 984 (1034)
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 431011121110111000002579899999999999999831268-8765426775368999999999999999998266
Q ss_pred HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 4672205888868799999999899999987432325
Q 001616 986 LKKFADTERLNWQQWLACIAMAAFTWPIGWAVKFIPV 1022 (1044)
Q Consensus 986 ~~~~f~~~~l~~~~w~~~~~~~~~~~~~~~~~k~i~~ 1022 (1044)
++.+|++.||++.+|+++++++++.+++.++.|++..
T Consensus 985 ~~~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~K~~~r 1021 (1034)
T 3ixz_A 985 MPNIFNFMPIRFQWWLVPMPFGLLIFVYDEIRKLGVR 1021 (1034)
T ss_pred HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 7777567889899999999999999999999999997
No 2
>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A
Probab=1.00 E-value=1 Score=1247.25 Aligned_cols=880 Identities=25% Similarity=0.350 Sum_probs=739.7
Q ss_pred HCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC----
Q ss_conf 0899999988299968999968798999995329985799999839999999954568999999999988201245----
Q 001616 111 LGGVEGVANALGTNPEYGINGNDEDVSRRSQLFGANTYHKPPPKGLLHFVLEAFKDTTILILLVCAALSLGFGIKE---- 186 (1044)
Q Consensus 111 ~ggv~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~il~v~a~isl~~g~~~---- 186 (1044)
...++++++.|+++..+||+.++ +.+|++.||+|.+++++++++|..++++|.++++++|++++++|++.+...
T Consensus 50 ~~~~~~~~~~l~t~~~~GLs~~e--~~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~~~~~iL~~aa~ls~~~~~~~~~~~ 127 (1028)
T 2zxe_A 50 KLSLDELHNKYGTDLTRGLTNAR--AKEILARDGPNSLTPPPTTPEWIKFCRQLFGGFSILLWIGAILCFLAYGIQAATE 127 (1028)
T ss_dssp SSCHHHHHHHHTCCSSSCBCHHH--HHHHHHHHCCSCCCCCCCCCHHHHHHTTTTSTHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred HCCHHHHHHHHCCCCCCCCCHHH--HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 49999999996869467989999--9999986699979999999899999999970899999999999999987511345
Q ss_pred -CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCEEEEEEECCCCCCCEEEECCCCEEEC
Q ss_conf -7987653302578899999999967899999999989611027953799969969997605644491999579995502
Q 001616 187 -HGAEEGWYEGGSIFVAVFLVIVVSAFSNFRQARQFDKLSKISNNIKVEVVREARRLQISIFDLVVGDIVFLKIGDQIPA 265 (1044)
Q Consensus 187 -~~~~~~~~d~~~i~~~v~lv~~v~a~~~~~~~~~~~~l~~~~~~~~v~ViR~G~~~~I~~~dLvvGDIV~l~~Gd~VPA 265 (1044)
+.+..+|++++.|++.+++..+++.+++++.++..++|.+. .+..++|+|||++++|++.||||||||.|++||+|||
T Consensus 128 ~~~~~~~~~~~~~i~~vv~i~~~~~~~qe~ka~~~~~~L~~l-~~~~a~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPa 206 (1028)
T 2zxe_A 128 DEPANDNLYLGVVLSTVVIVTGCFSYYQEAKSSRIMDSFKNM-VPQQALVIRDGEKSTINAEFVVAGDLVEVKGGDRIPA 206 (1028)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHHHHHTCCCCCHHHHHHTT-SCSEEEEEETTEEEEEEGGGCCTTCEEEEETTCBCCS
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEEC
T ss_conf 666520079998989888899999999999999999998852-7872699989999999888978677799899798412
Q ss_pred CEEEEECCCEEEECCCCCCCCCCEEECCCC--------CCEEEECCEEEECCEEEEEEEECCCCHHHHHHHHCCCCCCCC
Q ss_conf 179984273134167788999804305999--------961660416752706899989646144678975037899888
Q 001616 266 DGLFLDGHSLQVDESSMTGESDHVEVDSTN--------NPFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSSISSDSNER 337 (1044)
Q Consensus 266 Dgili~g~~l~VDeS~LTGEs~pv~k~~~~--------~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~ 337 (1044)
||++++|+++.||||+|||||.|+.|.+.. .+++|+||.+.+|.+.++|++||.+|++|++++++.+.+.++
T Consensus 207 D~~ll~g~~~~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~ 286 (1028)
T 2zxe_A 207 DLRIISAHGCKVDNSSLTGESEPQTRSPEFSSENPLETRNIAFFSTNCVEGTARGVVVYTGDRTVMGRIATLASGLEVGR 286 (1028)
T ss_dssp EEEEEEEEEEEEECHHHHSCCSCEECCSSCCCSSTTTCSSEECTTCEEEEEEEEEEEEECGGGSHHHHHHHHHHHSCCCC
T ss_pred EEEEEEECCEEEECCCCCCCCCCEECCCCCCCCCCCCCCCEEEECCEEECCEEEEEEEEECCCCHHHHHHHHCCCCCCCC
T ss_conf 28999608589986756788763443467788884453354873746970169999998451439889998603788788
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHH
Q ss_conf 93599999999999999999999999999999983277888884234799887201488999999999999998813414
Q 001616 338 TPLQARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAAAVTIVVVAIPEGL 417 (1044)
Q Consensus 338 tplq~~l~~la~~i~~~~l~~a~i~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~ilvvaiP~gL 417 (1044)
+|+|+.+++++.++..+++++++++|++++ +.+. .+...+..++++++++|||+|
T Consensus 287 t~lq~~~~~~~~~l~~~~l~~~~~~~~~~~---~~~~----------------------~~~~~~~~~i~llv~~iP~~L 341 (1028)
T 2zxe_A 287 TPIAIEIEHFIHIITGVAVFLGVSFFILSL---ILGY----------------------SWLEAVIFLIGIIVANVPEGL 341 (1028)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HTTC----------------------CHHHHHHHHHHHHHHHSCTTH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HCCC----------------------CHHHHHHHHHHHHHHHCCCHH
T ss_conf 928999999999999999999999999999---7367----------------------699999999999999747417
Q ss_pred HHHHHHHHHHHHHHHCCCCCEECCCHHHHCCCCEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCC-------CCCHH
Q ss_conf 79999999999876214610003661111135705784075232235853999999415321132101-------47937
Q 001616 418 PLAVTLTLAYSMKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKFWLGQESIVQETYC-------KIASS 490 (1044)
Q Consensus 418 plavtl~la~s~~~l~k~~~lvr~~~a~E~lG~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~-------~~~~~ 490 (1044)
|+++++++++++++|.+++++||+++++|+||++|+||||||||||+|+|+|.+++..+..+..+... .....
T Consensus 342 p~~vti~l~~~~~~mak~~ilvk~~~avE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (1028)
T 2zxe_A 342 LATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGAAFDKTSA 421 (1028)
T ss_dssp HHHHHHHHHHHHHHHHTTTEEESSTTHHHHHHHCCEEEECCCCCCBCSSCEEEEEEETTEEEECCCCTTCCSCCCCSSCH
T ss_pred HHHHHHHHHHHHHHHHHCCCEECCCHHHHHHCCCEEEECCCCCCCCCCEEEEEEEEECCEEEECCCCCCCCCCCCCCCCH
T ss_conf 99999999999999855891644456766414762995168888887738999999898465136777765544466778
Q ss_pred HHHHHHHHHHHCCCCCCCCCCC--CCCCCEECCCHHHHHHHHHHHHHCCCCHHHHHHCCCEEEEECCCCCCCEEEEEEEE
Q ss_conf 9999999973217751001589--99853003892589999999998198757763104178984688998638999974
Q 001616 491 IRDLFHQGVGLNTTGSVSKLKP--GSSVAEFSGSPTEKAVLSWAVLEMGMEMDKVKQKYSILHVETFNSEKKRSGVLIRR 568 (1044)
Q Consensus 491 ~~~~l~~~i~ln~~~~~~~~~~--~~~~~~~~g~p~e~All~~a~~~~g~~~~~~~~~~~il~~~~F~s~~krmsvvv~~ 568 (1044)
..+.+....++|+++....... .....+..|+|+|.|+++++. +.+.+....+..+++++.+||+|+||||+++++.
T Consensus 422 ~~~~l~~~~alc~~~~~~~~~~~hp~~~~~~~gdp~E~Al~~~a~-~~~~~~~~~~~~~~~~~~~pF~s~rk~msvi~~~ 500 (1028)
T 2zxe_A 422 TWSALSRIAALCNRAVFQAGQDNVPILKRSVAGDASESALLKCIE-LCCGSVQGMRDRNPKIVEIPFNSTNKYQLSIHEN 500 (1028)
T ss_dssp HHHHHHHHHHHSCCCEECTTCTTSCGGGSCEESCHHHHHHHHHHH-HHHSCHHHHHHHSCEEEEECCCTTTCEEEEEEEC
T ss_pred HHHHHHHHHHHCCCCEEECCCCCCCCCCCEECCCCHHHHHHHHHH-HHCCCHHHHHHHCCEEEEECCCCCCCEEEEEEEC
T ss_conf 999999999865787650477777664530078940999999999-9589888988748267870447666647999940
Q ss_pred CC--CCEEEEEECCCHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHCCCCHHH-H
Q ss_conf 69--98189996382789997203122359905038955599999999999750120010356214701111430178-7
Q 001616 569 KA--DNTTHIHWKGAAEIILAMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAYNNDVK-A 645 (1044)
Q Consensus 569 ~~--~~~~~~~~KGa~e~Il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~~A~k~l~~~~~~~~~~~~-~ 645 (1044)
.+ ++++++++|||||.|+++|+++. .+|...+++++.++.+.+.+++++++|+|++++|||+++++++....... .
T Consensus 501 ~~~~~~~~~~~~KGA~e~il~~c~~~~-~~g~~~~l~~~~~~~~~~~~~~~a~~G~RvL~~A~~~l~~~~~~~~~~~~~~ 579 (1028)
T 2zxe_A 501 EKSSESRYLLVMKGAPERILDRCSTIL-LNGAEEPLKEDMKEAFQNAYLELGGLGERVLGFCHFALPEDKYNEGYPFDAD 579 (1028)
T ss_dssp SCTTTCCEEEEEEECHHHHHTTEEEEC-BTTBCCBCCHHHHHHHHHHHHHHHHTTCEEEEEEEEECCSTTSCTTCCCCTT
T ss_pred CCCCCCCEEEEEECCCHHHHHHHHHHH-CCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCHH
T ss_conf 578887179999388289998745653-3897212888999999999999985599799999874682213420124624
Q ss_pred HHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCC--------------
Q ss_conf 542002690899973345999521799999999669789999489988899999990986666656--------------
Q 001616 646 RQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQV-------------- 711 (1044)
Q Consensus 646 ~~~~~e~~l~llGiigi~DplR~~v~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~~GI~~~~~~~-------------- 711 (1044)
.....|.|++|+|+++++||+||+++++|+.|+++||+++|+|||+..||.+||++|||...+...
T Consensus 580 ~~~~~e~~l~~lG~i~i~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~ 659 (1028)
T 2zxe_A 580 EPNFPTTDLCFVGLMAMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETIEDIAARLNIPIGQ 659 (1028)
T ss_dssp TTCSCCSSEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTSSCTTCCCHHHHHHHTTCCGGG
T ss_pred HHHHHHCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHH
T ss_conf 55555438099865115789984489999999986997999889977999999998698878833677777641863222
Q ss_pred -----CCCEEECCHHHHCCCHHHHHHHHCCCC--EEEECCHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCCCEEE
Q ss_conf -----553243025330489899999740211--7841294329999999986599999993995898887418921650
Q 001616 712 -----EKGEVVEGVEFRNYTDEERIQKVDKIR--VMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSM 784 (1044)
Q Consensus 712 -----~~~~vi~G~~~~~~~~~~~~~~~~~~~--V~ar~sP~~K~~lV~~Lq~~g~vVa~iGDG~NDapaLk~AdVGiam 784 (1044)
....+++|.++..+.++++.+.+.+.. +|||++|+||..+|+.+|+.|++|+|+|||.||+|||++|||||||
T Consensus 660 ~~~~~~~~~vi~G~~l~~~~~~~l~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~paLk~AdvGIAm 739 (1028)
T 2zxe_A 660 VNPRDAKACVVHGSDLKDLSTEVLDDILHYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAM 739 (1028)
T ss_dssp SCGGGCCEEEEEHHHHTTCCHHHHHHHHHHCSEEEEESCCHHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEE
T ss_pred CCCCCCCEEEEECHHHHHCCHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCEEEE
T ss_conf 15556626998808856479999999986279679998588899999999996899899985885339999868911996
Q ss_pred CCCCHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
Q ss_conf 78860888640688971699058999999968887847999999999999999999999994599845699999986345
Q 001616 785 GIQGTEVAKESSDIVILDDDFTSVATVLRWGRCVYTNIQKFIQFQLTVNVAALVINFIAAVSAGEVPLTAVQLLWVNLIM 864 (1044)
Q Consensus 785 g~~gt~vAk~aaDivlldd~f~sI~~~i~~GR~~~~nI~k~i~f~l~~Nv~~~~~~~~~~~~~~~~pl~~vqlL~vnli~ 864 (1044)
|++|+++||++||+++++|||++|+.++++||++|+||+|+++|++++|+.+++..+++.++..+.|++++|+||+|+++
T Consensus 740 g~~gtd~ak~aAD~Vl~~~~~~~I~~~i~~gR~i~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~qil~inl~~ 819 (1028)
T 2zxe_A 740 GISGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLVFIIGNVPLPLGTVTILCIDLGT 819 (1028)
T ss_dssp SSSCCHHHHHHCSEEETTCCTHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHCCCCSSCHHHHHHHHTTT
T ss_pred CCCCCHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
T ss_conf 77658889985489955798779999999999999999999999999999999999999997666445799999999999
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCC-CCCCHHHHHHH-HHHHHHHHHHHHHHHHH-----CC---C-------CCCCC
Q ss_conf 689887815689992010499999999-96369999999-99999999999999974-----01---2-------35889
Q 001616 865 DTLGALALATDRPTDELMQRPPVGRTE-PLITNIMWRNL-LSQALYQITILLILQFK-----GE---S-------IFNVS 927 (1044)
Q Consensus 865 d~l~alala~e~p~~~lm~r~P~~r~~-~li~~~m~~~i-~~~~~~q~~v~~~l~~~-----~~---~-------~~~~~ 927 (1044)
|.+|+++|++|||++++|+|||+.+++ +++++.++..+ +..++++.++.+..++. |. . ++...
T Consensus 820 d~~pa~al~~e~~~~~~m~~~Pr~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 899 (1028)
T 2zxe_A 820 DMVPAISLAYEQAESDIMKRQPRNPKTDKLVNERLISMAYGQIGMIQALGGFFSYFVILAENGFLPMDLIGKRVRWDDRW 899 (1028)
T ss_dssp THHHHHHGGGCCCSSCGGGSCCCCTTTCCSSCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHTTCCHHHHTTCHHHHSCTT
T ss_pred HHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHCCCC
T ss_conf 99999986028661456515999952134527999999999999999999999999987406766201310220010356
Q ss_pred --------------------CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH--H
Q ss_conf --------------------554331235599999998876541246544333565407799999999999999989--8
Q 001616 928 --------------------PEVNDTLIFNTFVFCQVFNEFNARKLEKRNVFKGIHKNKLFLGIIGITVVLQVVMVE--F 985 (1044)
Q Consensus 928 --------------------~~~~~t~~f~~fv~~qifn~~n~r~~~~~~~f~~~~~n~~f~~~i~~~~~~q~~~v~--~ 985 (1044)
....+|++|+++|++|+||.+|||.. +.++|+..++|++++.++++++++|++++. +
T Consensus 900 ~~~~~~~~~~~~~~~~~~~~~~~~~T~~f~~~v~~q~~~~~~~r~~-~~~~~~~~~~n~~l~~~~~~~~~l~~~~~~~p~ 978 (1028)
T 2zxe_A 900 ISDVEDSFGQQWTYEQRKIVEFTCHTSFFISIVVVQWADLIICKTR-RNSIFQQGMKNKILIFGLFEETALAAFLSYCPG 978 (1028)
T ss_dssp CCCEECTTSCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCS-SSCHHHHCSCCHHHHHHHHHHHHHHHHHHHSTT
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-CCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 5421134553222344445666788999999999999999987468-751101577688999999999999999998656
Q ss_pred HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 467220588886879999999989999998743232
Q 001616 986 LKKFADTERLNWQQWLACIAMAAFTWPIGWAVKFIP 1021 (1044)
Q Consensus 986 ~~~~f~~~~l~~~~w~~~~~~~~~~~~~~~~~k~i~ 1021 (1044)
++.+|+++||++.+|++|+++++..+++.++.|++.
T Consensus 979 ~~~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~~ 1014 (1028)
T 2zxe_A 979 TDVALRMYPLKPSWWFCAFPYSLIIFLYDEMRRFII 1014 (1028)
T ss_dssp HHHHTCCCCCCGGGGGTTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 776421888999999999999999999999999998
No 3
>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ...
Probab=1.00 E-value=1 Score=1234.53 Aligned_cols=887 Identities=28% Similarity=0.422 Sum_probs=746.0
Q ss_pred CCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC--C
Q ss_conf 89999998829996899996879899999532998579999983999999995456899999999998820124579--8
Q 001616 112 GGVEGVANALGTNPEYGINGNDEDVSRRSQLFGANTYHKPPPKGLLHFVLEAFKDTTILILLVCAALSLGFGIKEHG--A 189 (1044)
Q Consensus 112 ggv~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~il~v~a~isl~~g~~~~~--~ 189 (1044)
-.++++++.|+++..+||+.++ +.+|+++||+|+++.++++++|+.++++|+++++++|++++++|+++++...+ .
T Consensus 8 ~~~~~~~~~l~~~~~~GLs~~e--~~~r~~~~G~N~l~~~~~~~~~~~~~~qf~~~~~~~l~~~a~~s~~~~~~~~~~~~ 85 (995)
T 3ar4_A 8 KSTEECLAYFGVSETTGLTPDQ--VKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILLLAACISFVLAWFEEGEET 85 (995)
T ss_dssp SCHHHHHHHHTCCTTTCBCHHH--HHHHHHHHCCSSCCCCCCCCHHHHHHGGGCSHHHHHHHHHHHHHHHHTTSCCSSGG
T ss_pred CCHHHHHHHHCCCCCCCCCHHH--HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 8999999985899666989999--99999756887328988986999999999889999999999999998860256654
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCE--EEEEEECCCCCCCEEEECCCCEEECCE
Q ss_conf 765330257889999999996789999999998961102795379996996--999760564449199957999550217
Q 001616 190 EEGWYEGGSIFVAVFLVIVVSAFSNFRQARQFDKLSKISNNIKVEVVREAR--RLQISIFDLVVGDIVFLKIGDQIPADG 267 (1044)
Q Consensus 190 ~~~~~d~~~i~~~v~lv~~v~a~~~~~~~~~~~~l~~~~~~~~v~ViR~G~--~~~I~~~dLvvGDIV~l~~Gd~VPADg 267 (1044)
...|+|++.|++.+++...++.+++++.++..++|.+. .+..++|+|||+ .++|++.||||||+|.|++||+|||||
T Consensus 86 ~~~~~~~~~i~~~~~~~~~i~~~qe~~a~~al~~L~~~-~~~~a~V~R~g~~~~~~I~~~~lv~GDiV~l~~Gd~IPaD~ 164 (995)
T 3ar4_A 86 ITAFVEPFVILLILIANAIVGVWQERNAENAIEALKEY-EPEMGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADI 164 (995)
T ss_dssp GSSSHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHGGG-SCSEEEEEBTTCSSCEEEEGGGCCTTCEEEEETTCBCCSEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCCEEEEEECCCCEEEEEEHHHCCCCCEEEECCCCCCCCCE
T ss_conf 03478768866788999999999999999999998710-89738999379864799789998778789988978435448
Q ss_pred EEEE--CCCEEEECCCCCCCCCCEEECCC-----------CCCEEEECCEEEECCEEEEEEEECCCCHHHHHHHHCCCCC
Q ss_conf 9984--27313416778899980430599-----------9961660416752706899989646144678975037899
Q 001616 268 LFLD--GHSLQVDESSMTGESDHVEVDST-----------NNPFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSSISSDS 334 (1044)
Q Consensus 268 ili~--g~~l~VDeS~LTGEs~pv~k~~~-----------~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~ 334 (1044)
++++ +.++.||||+|||||.|+.|.+. .++.+|+||.+.+|.+.++|++||.+|++|++++++.+.+
T Consensus 165 ~ll~~~s~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~~~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~ 244 (995)
T 3ar4_A 165 RILSIKSTTLRVDQSILTGESVSVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQMAATE 244 (995)
T ss_dssp EEEEECSSCEEEECHHHHCCCSCEEECCSCCCCTTCCGGGCTTEECTTCEEEECEEEEEEEECGGGSHHHHHHHHHHTCC
T ss_pred EEEEEEECEEEEECCCCCCCCCCEECCCCCCCCCCCCCCCCCCEEECCCEEECCEEEEEEEECCCCHHHHHHHHHHHCCC
T ss_conf 99988504399982524688763340045667766675554546761878984458999997672219899999732578
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 88893599999999999999999999999999999983277888884234799887201488999999999999998813
Q 001616 335 NERTPLQARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAAAVTIVVVAIP 414 (1044)
Q Consensus 335 ~~~tplq~~l~~la~~i~~~~l~~a~i~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~ilvvaiP 414 (1044)
.+++|+|+++++++.++.++.+.+++++++++...+ .. . ..+ ..++..+..+|..++++++++||
T Consensus 245 ~~~tplq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----~-----~~~-----~~~~~~~~~~~~~ai~l~v~aiP 309 (995)
T 3ar4_A 245 QDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHF-ND----P-----VHG-----GSWIRGAIYYFKIAVALAVAAIP 309 (995)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGG-GS----C-----SSS-----SCHHHHHHHHHHHHHHHHHHHSC
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CC----C-----CCC-----CHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 789938999999999999999999999999999874-14----3-----346-----40799999999999999998667
Q ss_pred CHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHCCCCEEEEEECCCCCCCCCCEEEEEEEECCCCCCC---------CCC-
Q ss_conf 4147999999999987621461000366111113570578407523223585399999941532113---------210-
Q 001616 415 EGLPLAVTLTLAYSMKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKFWLGQESIVQ---------ETY- 484 (1044)
Q Consensus 415 ~gLplavtl~la~s~~~l~k~~~lvr~~~a~E~lG~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~---------~~~- 484 (1044)
|+||+++|+++++++.+|+++++++|+++++|+||++++||||||||||+|+|+|.+++..+..+.. +..
T Consensus 310 ~~Lp~~vt~~la~~~~~ma~~~~lvr~~~~iE~Lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (995)
T 3ar4_A 310 EGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCKMFIIDKVDGDFCSLNEFSITGST 389 (995)
T ss_dssp TTHHHHHHHHHHHHHHHHHHTTEEESCTTHHHHHHTCCEEEEESTTTTBCCCCEEEEEEEEEEEETTEEEEEEEEECCSS
T ss_pred CCHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHCCCEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCEEECCCCC
T ss_conf 60489999999999998441784861341555503833997658887665856999998347556765543025404777
Q ss_pred -CC-------------CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHCCC-CH--H------
Q ss_conf -14-------------7937999999997321775100158999853003892589999999998198-75--7------
Q 001616 485 -CK-------------IASSIRDLFHQGVGLNTTGSVSKLKPGSSVAEFSGSPTEKAVLSWAVLEMGM-EM--D------ 541 (1044)
Q Consensus 485 -~~-------------~~~~~~~~l~~~i~ln~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~~g~-~~--~------ 541 (1044)
.. ........+....++|+++.+... +.++..+..|+|+|.|++.++. +.|. +. .
T Consensus 390 ~~p~~~~~~~~~~~~~~~~~~~~~l~~~~alc~~~~~~~~-~~~~~~~~~g~p~E~Al~~~a~-~~g~~~~~~~~i~~~~ 467 (995)
T 3ar4_A 390 YAPEGEVLKNDKPIRSGQFDGLVELATICALCNDSSLDFN-ETKGVYEKVGEATETALTTLVE-KMNVFNTEVRNLSKVE 467 (995)
T ss_dssp SSSCCCEEETTEECCGGGCHHHHHHHHHHHHSCCCEEEEE-TTTTEEEEESCHHHHHHHHHHH-HHCTTCCCCTTSCTTT
T ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCC-CCCCCEEECCCCCHHHHHHHHH-HCCCCCCCCCCCCCCC
T ss_conf 6886310136643444455899999999987488805656-8898325547964799999999-8399641000134201
Q ss_pred -------HHHHCCCEEEEECCCCCCCEEEEEEEECCCC----EEEEEECCCHHHHHHHCCCCCCCCCEEECCCHHHHHHH
Q ss_conf -------7631041789846889986389999746998----18999638278999720312235990503895559999
Q 001616 542 -------KVKQKYSILHVETFNSEKKRSGVLIRRKADN----TTHIHWKGAAEIILAMCSHYYESNGVIKSMDGNGRSQM 610 (1044)
Q Consensus 542 -------~~~~~~~il~~~~F~s~~krmsvvv~~~~~~----~~~~~~KGa~e~Il~~c~~~~~~~g~~~~l~~~~~~~~ 610 (1044)
..++.+++++.+||+|+||||+++++.++++ ++++|+|||||.|+++|+++... +...+++++.++.+
T Consensus 468 ~~~~~~~~~~~~~~~~~~~pF~s~rk~msvi~~~~~g~~~~~~~~~~~KGa~e~il~~c~~~~~~-~~~~~l~~~~~~~~ 546 (995)
T 3ar4_A 468 RANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVG-TTRVPMTGPVKEKI 546 (995)
T ss_dssp STTHHHHHHHHHEEEEEEEEEETTTTEEEEEEEESSCCSCSCCCEEEEEECHHHHHHTEEEEEET-TEEEECCHHHHHHH
T ss_pred CCCCCHHHHHHHCCEEEEEECCCCCCEEEEEEECCCCCCCCCCEEEEECCCHHHHHHHCCHHHCC-CCCCCCCHHHHHHH
T ss_conf 01210155664174577740488887569998348987666444999758879999854054428-97324999999999
Q ss_pred HHHHHHH--HHCCCCEEEEEEEECCCHHHCCCCHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEC
Q ss_conf 9999999--75012001035621470111143017875420026908999733459995217999999996697899994
Q 001616 611 ENIIHGM--AASSLRCIAFAYKQVSEEETAYNNDVKARQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMIT 688 (1044)
Q Consensus 611 ~~~i~~~--a~~glR~l~~A~k~l~~~~~~~~~~~~~~~~~~e~~l~llGiigi~DplR~~v~~aI~~l~~aGI~v~miT 688 (1044)
.+.++++ +++|+|++++|||+++.++..............|+|++++|+++++||+||+++++|+.|+++||+++|+|
T Consensus 547 ~~~~~~~~~a~~GlRvLa~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~~Gi~v~miT 626 (995)
T 3ar4_A 547 LSVIKEWGTGRDTLRCLALATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMIT 626 (995)
T ss_dssp HHHHHHHHHSTTCCEEEEEEEESSCCCGGGCCTTCGGGHHHHTCSEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEC
T ss_conf 99999877630561488999983476511122234024455306948999985258896669999999998699899989
Q ss_pred CCCHHHHHHHHHHCCCCCCCCCCCCCEEECCHHHHCCCHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHCCCEEEEECCC
Q ss_conf 89988899999990986666656553243025330489899999740211784129432999999998659999999399
Q 001616 689 GDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDG 768 (1044)
Q Consensus 689 GD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~sP~~K~~lV~~Lq~~g~vVa~iGDG 768 (1044)
||+..||.++|++|||...+... ...+++|.+++.+.++++.+.+++..+|||++|+||.++|+.+|+.|++|+|+|||
T Consensus 627 GD~~~ta~~ia~~lgi~~~~~~i-~~~~~~g~~~~~l~~~~~~~~~~~~~v~~r~~P~~K~~~v~~l~~~g~~v~~~GDG 705 (995)
T 3ar4_A 627 GDNKGTAIAICRRIGIFGENEEV-ADRAYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDG 705 (995)
T ss_dssp SSCHHHHHHHHHHHTSSCTTCCC-TTTEEEHHHHHTSCHHHHHHHHHHCCEEESCCSSHHHHHHHHHHTTTCCEEEEECS
T ss_pred CCCHHHHHHHHHHCCCCCCCCCC-CCEEEECHHHHHCCHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHCCCEEEEECCC
T ss_conf 99789999999983967788753-53489836646289999999875373899708999999999999779979998388
Q ss_pred CCCHHHHHHCCCCEEECCCCHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 58988874189216507886088864068897169905899999996888784799999999999999999999999459
Q 001616 769 TNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLRWGRCVYTNIQKFIQFQLTVNVAALVINFIAAVSAG 848 (1044)
Q Consensus 769 ~NDapaLk~AdVGiamg~~gt~vAk~aaDivlldd~f~sI~~~i~~GR~~~~nI~k~i~f~l~~Nv~~~~~~~~~~~~~~ 848 (1044)
.||+|||++||+||||| +|+++|+++||+++++|+|.+|+.+++|||++|+||+|+++|++++|+..++..+++.+++.
T Consensus 706 ~ND~~alk~Advgiamg-~g~~~ak~aAd~vl~~~~~~~i~~~i~~GR~~~~~i~k~i~~~l~~Ni~~~~~~~~~~~~g~ 784 (995)
T 3ar4_A 706 VNDAPALKKAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGL 784 (995)
T ss_dssp GGGHHHHHHSTEEEEET-TSCHHHHHTCSEEETTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHCCEEEEEC-CCCHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 14499998789679967-88999997388997778778999999998999999999999999999999999999999847
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH-HHHCC---C--
Q ss_conf 98456999999863456898878156899920104999999999636999999999999999999999-97401---2--
Q 001616 849 EVPLTAVQLLWVNLIMDTLGALALATDRPTDELMQRPPVGRTEPLITNIMWRNLLSQALYQITILLIL-QFKGE---S-- 922 (1044)
Q Consensus 849 ~~pl~~vqlL~vnli~d~l~alala~e~p~~~lm~r~P~~r~~~li~~~m~~~i~~~~~~q~~v~~~l-~~~~~---~-- 922 (1044)
+.||+++|+||+|+++|.+|+++|++|||++++|+|||+.++++++++.++..++.+++|+.++.+.. .++.. .
T Consensus 785 ~~pl~~~qil~~nl~~d~~p~l~l~~~~~~~~~m~~~P~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 864 (995)
T 3ar4_A 785 PEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDRPPRSPKEPLISGWLFFRYMAIGGYVGAATVGAAAWWFMYAEDGP 864 (995)
T ss_dssp CCSSCHHHHHHHHHTTTHHHHHHHTTCCCCTTGGGSCCCCTTCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHTSSCSSSC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 62578999999999998877776306777756873799997645448999999999999999999999999998515665
Q ss_pred ---CCCC---------------------CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf ---3588---------------------9554331235599999998876541246544333565407799999999999
Q 001616 923 ---IFNV---------------------SPEVNDTLIFNTFVFCQVFNEFNARKLEKRNVFKGIHKNKLFLGIIGITVVL 978 (1044)
Q Consensus 923 ---~~~~---------------------~~~~~~t~~f~~fv~~qifn~~n~r~~~~~~~f~~~~~n~~f~~~i~~~~~~ 978 (1044)
+..+ .....+|++|+++|++|+||.+|||+.+...++.++++|++++.++++++++
T Consensus 865 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~lv~~~~~~~~~~r~~~~~~~~~~~~~n~~l~~~~~~~~~l 944 (995)
T 3ar4_A 865 GVTYHQLTHFMQCTEDHPHFEGLDCEIFEAPEPMTMALSVLVTIEMCNALNSLSENQSLMRMPPWVNIWLLGSICLSMSL 944 (995)
T ss_dssp CCTTCCGGGCSSCSSCCSCCSCSCCCGGGCHHHHHHHHHHHHHHHHHHHHTTSCSSCCTTTSCGGGCHHHHHHHHHHHHH
T ss_pred CCCCCHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCHHHHHHHHHHHHH
T ss_conf 43300000112234443333433221001013565999999999999999860255431005775479999999999999
Q ss_pred HHHH--HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 9999--898467220588886879999999989999998743232
Q 001616 979 QVVM--VEFLKKFADTERLNWQQWLACIAMAAFTWPIGWAVKFIP 1021 (1044)
Q Consensus 979 q~~~--v~~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~~~~k~i~ 1021 (1044)
|+++ +++++.+|++.|+++.+|+++++++++.+++.++.|++.
T Consensus 945 ~~~~~~~p~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~~ 989 (995)
T 3ar4_A 945 HFLILYVDPLPMIFKLKALDLTQWLMVLKISLPVIGLDEILKFIA 989 (995)
T ss_dssp HHHHHHSTHHHHHTTCCCCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999998887777611578999999999999999999999999994
No 4
>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1
Probab=1.00 E-value=1 Score=1129.11 Aligned_cols=839 Identities=23% Similarity=0.315 Sum_probs=682.7
Q ss_pred CCCCCHHHHHHHHCCCCHHHH---H---HHCCHHH-HHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHH
Q ss_conf 997798889987317995689---8---4089999-99882999689999687989999953299857999998399999
Q 001616 88 DPDMDGIRLAEMVKNKDSHTL---S---LLGGVEG-VANALGTNPEYGINGNDEDVSRRSQLFGANTYHKPPPKGLLHFV 160 (1044)
Q Consensus 88 ~~~~~~~~l~~~~~~~~~~~l---~---~~ggv~~-l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~~~~~~ 160 (1044)
.+..+.++|.+.++.++.+.. + ..|++++ ++..|+++..+||+.++ +.+|++.||+|++++++ +++|..+
T Consensus 40 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~t~~~~GLs~~e--a~~r~~~~G~N~l~~~~-~~~~~~~ 116 (920)
T 1mhs_A 40 DEDEDIDALIEDLESHDGHDAEEEEEEATPGGGRVVPEDMLQTDTRVGLTSEE--VVQRRRKYGLNQMKEEK-ENHFLKF 116 (920)
T ss_dssp CCHHHHHHHHHHHSSCCCCCCSSSCCCSHHHHHSCCSSTTTTTCCCCCCCSHH--HHHHHHHTSSSSCCCCC-CSSHHHH
T ss_pred CHHCCHHHHHHHHHHHCCCCCCCCHHHHHCCCCCHHHHHHHCCCCCCCCCHHH--HHHHHHHCCCCCCCCCC-CCHHHHH
T ss_conf 10138999988875203566432045540376203689985899579999999--99999963998158888-8899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCE
Q ss_conf 99954568999999999988201245798765330257889999999996789999999998961102795379996996
Q 001616 161 LEAFKDTTILILLVCAALSLGFGIKEHGAEEGWYEGGSIFVAVFLVIVVSAFSNFRQARQFDKLSKISNNIKVEVVREAR 240 (1044)
Q Consensus 161 ~~~~~~~~~~il~v~a~isl~~g~~~~~~~~~~~d~~~i~~~v~lv~~v~a~~~~~~~~~~~~l~~~~~~~~v~ViR~G~ 240 (1044)
+++|.+++.++|++++++++++| .|.|++.|++.+++..+++.+++|+.++..++|.+. .+..++|+|||+
T Consensus 117 l~~f~~~~~~ll~~aai~s~~~g--------~~~~~~~i~~vv~i~~~i~~~qe~~a~~a~~~L~~l-~~~~a~V~RdG~ 187 (920)
T 1mhs_A 117 LGFFVGPIQFVMEGAAVLAAGLE--------DWVDFGVICGLLLLNAVVGFVQEFQAGSIVDELKKT-LALKAVVLRDGT 187 (920)
T ss_dssp THHHHHHHHHHHHHHHHHCTTCS--------CSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTC-CCSSCEEECSSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCCEEEEEECCE
T ss_conf 99998799999999999999997--------689999999999999999999999999999986335-998799998998
Q ss_pred EEEEEECCCCCCCEEEECCCCEEECCEEEEECCC-EEEECCCCCCCCCCEEECCCCCCEEEECCEEEECCEEEEEEEECC
Q ss_conf 9997605644491999579995502179984273-134167788999804305999961660416752706899989646
Q 001616 241 RLQISIFDLVVGDIVFLKIGDQIPADGLFLDGHS-LQVDESSMTGESDHVEVDSTNNPFLFSGSKVADGYAQMLVVSVGM 319 (1044)
Q Consensus 241 ~~~I~~~dLvvGDIV~l~~Gd~VPADgili~g~~-l~VDeS~LTGEs~pv~k~~~~~~~l~sGt~v~~G~~~~~V~~vG~ 319 (1044)
+++|++.||||||+|.|++||+|||||++++|++ +.||||+|||||.|+.|. .++.+|+||.+.+|.+.++|++||.
T Consensus 188 ~~~I~~~eLv~GDiV~l~~Gd~VPaDg~ll~g~~~l~VDES~LTGES~PV~K~--~gd~v~sGT~v~~G~~~~~V~~tG~ 265 (920)
T 1mhs_A 188 LKEIEAPEVVPGDILQVEEGTIIPADGRIVTDDAFLQVDQSALTGESLAVDKH--KGDQVFASSAVKRGEAFVVITATGD 265 (920)
T ss_dssp EEECCTTTSCTTSEEEECTTCBCSSEEEEEEESSCCEEBCTTTSSCCCCEECC--SSCEECSCBCCSCCCEEEEEEECST
T ss_pred EEEEEHHHCCCCCEEEECCCCCCCCCEEEEECCCEEEEECCCCCCCCCCEEEC--CCCEEECCCEEECCEEEEEEEEECC
T ss_conf 99989899588978996779733665699945722320222247888646934--7986303766951359999999577
Q ss_pred CCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 14467897503789988893599999999999999999999999999999983277888884234799887201488999
Q 001616 320 NTAWGEMMSSISSDSNERTPLQARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVV 399 (1044)
Q Consensus 320 ~T~~g~i~~~~~~~~~~~tplq~~l~~la~~i~~~~l~~a~i~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (1044)
+|++|++.+++.+...+++|+|+.+++++.++..+.+++++++|+.+ ++.+ . .+.
T Consensus 266 ~T~~g~I~~lv~~a~~~~~~l~~~~~~i~~~l~~~~~~~~~i~~~~~---~~~~-------~---------------~~~ 320 (920)
T 1mhs_A 266 NTFVGRAAALVNAASGGSGHFTEVLNGIGTILLILVIFTLLIVWVSS---FYRS-------N---------------PIV 320 (920)
T ss_dssp TCSTTTTTSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTT---TTTT-------C---------------CHH
T ss_pred CCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHCC-------C---------------CHH
T ss_conf 67888998877642467764999999999999999999999999998---8468-------8---------------699
Q ss_pred HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHCCCCEEEEEECCCCCCCCCCEEEEEEEECCCCC
Q ss_conf 99999999999881341479999999999876214610003661111135705784075232235853999999415321
Q 001616 400 SIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKFWLGQESI 479 (1044)
Q Consensus 400 ~~~~~ai~ilvvaiP~gLplavtl~la~s~~~l~k~~~lvr~~~a~E~lG~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~ 479 (1044)
..+..++++++++|||+||+++|+++++++.+|.++|+++|+++++|+||++++||||||||||+|+|+|.+++..+. +
T Consensus 321 ~~l~~av~llV~aiP~aLp~~vti~la~g~~~mak~~ilvk~~~aiE~Lg~v~vIc~DKTGTLT~n~m~v~~~~~~~g-~ 399 (920)
T 1mhs_A 321 QILEFTLAITIIGVPVGLPAVVTTTMAVGAAYLAKKKAIVQKLSAIESLAGVEILCSDKTGTLTKNKLSLHDPYTVAG-V 399 (920)
T ss_dssp HHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTTCCCCCTTTHHHHHTCCEEEEETBTTTBSSCSCCCCCBCCSC-C
T ss_pred HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHCCCCEEEECCCCCCCCCCEEEEEEEECCC-C
T ss_conf 999999999987676037777899999999999868838705713555436768997788875555316999850699-8
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHCCCCHHHHHHCCCEEEEECCCCCC
Q ss_conf 13210147937999999997321775100158999853003892589999999998198757763104178984688998
Q 001616 480 VQETYCKIASSIRDLFHQGVGLNTTGSVSKLKPGSSVAEFSGSPTEKAVLSWAVLEMGMEMDKVKQKYSILHVETFNSEK 559 (1044)
Q Consensus 480 ~~~~~~~~~~~~~~~l~~~i~ln~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~~g~~~~~~~~~~~il~~~~F~s~~ 559 (1044)
. +. +++ ...++|+... .. .+||+|.|+++++. +.+.. ...+..+++.+.+||+|.+
T Consensus 400 ~--------~~--~ll-~~a~l~~~~~------~~-----~~~P~e~Al~~~~~-~~~~~-~~~~~~~~~~~~~pF~s~~ 455 (920)
T 1mhs_A 400 D--------PE--DLM-LTACLAASRK------KK-----GIDAIDKAFLKSLK-YYPRA-KSVLSKYKVLQFHPFDPVS 455 (920)
T ss_dssp C--------CT--HHH-HHHHHSCCCS------SC-----SCCSHHHHHHHHHH-HSSSC-CGGGSCCCEEEEEEEETTT
T ss_pred C--------HH--HHH-HHHHHHCCCC------CC-----CCCHHHHHHHHHHH-HCCCC-HHHCCCCCEEEEEECCCCC
T ss_conf 9--------89--999-9999854776------66-----89858999999999-64631-0101355335786116778
Q ss_pred CEEEEEEEECCCCEEEEEECCCHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHCC
Q ss_conf 63899997469981899963827899972031223599050389555999999999997501200103562147011114
Q 001616 560 KRSGVLIRRKADNTTHIHWKGAAEIILAMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAY 639 (1044)
Q Consensus 560 krmsvvv~~~~~~~~~~~~KGa~e~Il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~~A~k~l~~~~~~~ 639 (1044)
|+|+++++.++++ ..+++|||||.++++|+. ..+++++.++.+.+.+++++.+|+|++++||+..
T Consensus 456 k~ms~iv~~~~g~-~~~~~KGape~il~~c~~-------~~~~~~~~~~~~~~~~~~~a~~G~RvL~vA~~~~------- 520 (920)
T 1mhs_A 456 KKVVAVVESPQGE-RITCVKGAPLFVLKTVEE-------DHPIPEEVDQAYKNKVAEFATRGFRSLGVARKRG------- 520 (920)
T ss_dssp TEEEEEECCSSSS-CEEEEEECHHHHHHHCCC-------SSCCCHHHHHHHHHHHHHHHTSSCCCCEECCCSS-------
T ss_pred CEEEEEEEECCCC-EEEEEECCHHHHHHHCCC-------CCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEECC-------
T ss_conf 8599999967991-899990879999986135-------6789878899899999999867997999998326-------
Q ss_pred CCHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCEEECC
Q ss_conf 30178754200269089997334599952179999999966978999948998889999999098666665655324302
Q 001616 640 NNDVKARQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEG 719 (1044)
Q Consensus 640 ~~~~~~~~~~~e~~l~llGiigi~DplR~~v~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G 719 (1044)
|++++++|+++++||+||+++++|+.|+++||+++|+||||..||++||++|||..... ..+..+++|
T Consensus 521 -----------e~~l~~lGli~i~Dp~R~ea~~aI~~l~~aGI~v~MiTGD~~~TA~aIA~~lGI~~~~~-~~~~~~~~g 588 (920)
T 1mhs_A 521 -----------EGSWEILGIMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLGTNIY-NAERLGLGG 588 (920)
T ss_dssp -----------SCSCCCCBBCCCCCCCCHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHTSSCSCC-CSSSSSSCB
T ss_pred -----------CCCCEEEEEEEEECCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCC-CCCCEEECC
T ss_conf -----------65307889999734321017999999862574499983897899999999849996546-754124227
Q ss_pred HHHHCCCHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCCCEEECCCCHHHHHHCCCEE
Q ss_conf 53304898999997402117841294329999999986599999993995898887418921650788608886406889
Q 001616 720 VEFRNYTDEERIQKVDKIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIV 799 (1044)
Q Consensus 720 ~~~~~~~~~~~~~~~~~~~V~ar~sP~~K~~lV~~Lq~~g~vVa~iGDG~NDapaLk~AdVGiamg~~gt~vAk~aaDiv 799 (1044)
. +.++++++.+.+++..||+|++|+||.++|+.||+.|++|+|+|||+||+|||++|||||||| +|+++||++||++
T Consensus 589 ~--~~~~~~el~~~~~~~~V~arv~P~~K~~iV~~Lq~~g~~Vam~GDGvNDapaLk~AdvGIAmg-~gtd~ak~aADiV 665 (920)
T 1mhs_A 589 G--GDMPGSEVYDFVEAADGFAEVFPQHKYNVVEILQQRGYLVAMTGDGVNDAPSLKKADTGIAVE-GSSDAARSAADIV 665 (920)
T ss_dssp C--CCGGGGGGGTTTTTTSCEESCCSTHHHHHHHHHHTTTCCCEECCCCGGGHHHHHHSSEEEEET-TSCHHHHHSSSEE
T ss_pred C--CCCCHHHHHHHHHHCEEEEEECHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCCCCCCC-CCCHHHHHHCCEE
T ss_conf 6--558989999877518199983799999999999967996999828810099998578674056-4339999846807
Q ss_pred ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 71699058999999968887847999999999999999999999994599845699999986345689887815689992
Q 001616 800 ILDDDFTSVATVLRWGRCVYTNIQKFIQFQLTVNVAALVINFIAAVSAGEVPLTAVQLLWVNLIMDTLGALALATDRPTD 879 (1044)
Q Consensus 800 lldd~f~sI~~~i~~GR~~~~nI~k~i~f~l~~Nv~~~~~~~~~~~~~~~~pl~~vqlL~vnli~d~l~alala~e~p~~ 879 (1044)
++||+|++|+.++++||++|+||+|+++|+++.|+....+.++...+.+ .|+++.|++|+|+++|. |+++|++|+++.
T Consensus 666 l~~~~~~~I~~ai~~gR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~-~~l~~~~il~~~l~~d~-~~lal~~e~~~~ 743 (920)
T 1mhs_A 666 FLAPGLGAIIDALKTSRQIFHRMYAYVVYRIALSIHLEIFLGLWIAILN-RSLNIELVVFIAIFADV-ATLAIAYDNAPY 743 (920)
T ss_dssp ESSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCS-CCCCHHHHHHHHHHHTT-HHHHCCCCCSGG
T ss_pred ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCHHHHHHHHHHHHH-HHHHHCCCCCCC
T ss_conf 7679777899999999999999999878897999999999999999996-16879999999999877-766513567643
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH---HH-CC-CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 01049999999996369999999999999999999999---74-01-235889554331235599999998876541246
Q 001616 880 ELMQRPPVGRTEPLITNIMWRNLLSQALYQITILLILQ---FK-GE-SIFNVSPEVNDTLIFNTFVFCQVFNEFNARKLE 954 (1044)
Q Consensus 880 ~lm~r~P~~r~~~li~~~m~~~i~~~~~~q~~v~~~l~---~~-~~-~~~~~~~~~~~t~~f~~fv~~qifn~~n~r~~~ 954 (1044)
+ +||+.++.+- +|+.++..+++.....+..+ +. +. ..+..+....+|+.|++++++|+||.+|+|...
T Consensus 744 ~---~~P~~~~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~T~~f~~lv~~~~~~~~~~R~~~ 816 (920)
T 1mhs_A 744 S---QTPVKWNLPK----LWGMSVLLGVVLAVGTWITVTTMYAQGENGGIVQNFGNMDEVLFLQISLTENWLIFITRANG 816 (920)
T ss_dssp G---GSCCCCCSSS----CSSCHHHHHHHHHHHHHHHHHHHTTTTTTCCSSSSSSSHHHHHHHHHHHHHHHHTTSSSCSS
T ss_pred C---CCCCCCHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCH
T ss_conf 4---5887840898----99999999999999999999999983545653320667899999999999999999850360
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
Q ss_conf 54433356540779999999999999998984672205888868799999999899999987432325883146687787
Q 001616 955 KRNVFKGIHKNKLFLGIIGITVVLQVVMVEFLKKFADTERLNWQQWLACIAMAAFTWPIGWAVKFIPVTEKPIFSYLKRL 1034 (1044)
Q Consensus 955 ~~~~f~~~~~n~~f~~~i~~~~~~q~~~v~~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~~~~k~i~~~~~~~~~~~~~~ 1034 (1044)
.+|++. .|+++++++++..++++++..+ + +|+++|++|.+|+++++++++.+++.++.|++-...++|.+.-.++
T Consensus 817 --~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~-~f~~~~l~~~~~~~~~~~~~~~~~~~e~~k~~~~~~~~fd~~~~~~ 891 (920)
T 1mhs_A 817 --PFWSSI-PSWQLSGAIFLVDILATCFTIW-G-WFEHSDTSIVAVVRIWIFSFGIFCIMGGVYYILQDSVGFDNLMHGK 891 (920)
T ss_dssp --SCSCCS-CTHHHHHHHHHHHHHHHHHHSS-S-STTSCSHHHHTHHHHHHHTTHHHHHHHHHHHCCCCCCTTHHHHHHH
T ss_pred --HHHCCC-HHHHHHHHHHHHHHHHHHHHHH-H-HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf --540375-5999999999999999999976-5-6316788999999999999999999999999986048788775568
No 5
>3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana}
Probab=1.00 E-value=1 Score=1092.97 Aligned_cols=811 Identities=21% Similarity=0.308 Sum_probs=637.1
Q ss_pred CHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 99999988299968999968798999995329985799999839999999954568999999999988201245798765
Q 001616 113 GVEGVANALGTNPEYGINGNDEDVSRRSQLFGANTYHKPPPKGLLHFVLEAFKDTTILILLVCAALSLGFGIKEHGAEEG 192 (1044)
Q Consensus 113 gv~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~il~v~a~isl~~g~~~~~~~~~ 192 (1044)
.++++.+.|+++ .+||+.++ +.+|++.||+|++++++ +++|..++++|.+++.++|+++++++++++... +....
T Consensus 18 ~~~~~~~~l~~~-~~GLs~~e--~~~r~~~~G~N~l~~~~-~~~~~~~l~~~~~p~~~il~~aaiis~~l~~~~-~~~~~ 92 (885)
T 3b8c_A 18 PIEEVFQQLKCS-REGLTTQE--GEDRIQIFGPNKLEEKK-ESKLLKFLGFMWNPLSWVMEMAAIMAIALANGD-GRPPD 92 (885)
T ss_dssp STTCCTTTSSSC-SSCSTHHH--HHHHSSSCCSCCTTTTC-CCTTSSTTSCCCGGGSSHHHHHHHGGGGSSCCT-TSCSC
T ss_pred CHHHHHHHHCCC-CCCCCHHH--HHHHHHHCCCCCCCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCCCC
T ss_conf 999999983899-99989999--99999851997158878-879999999999999999999999999997045-66301
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCEEEEEEECCCCCCCEEEECCCCEEECCEEEEEC
Q ss_conf 33025788999999999678999999999896110279537999699699976056444919995799955021799842
Q 001616 193 WYEGGSIFVAVFLVIVVSAFSNFRQARQFDKLSKISNNIKVEVVREARRLQISIFDLVVGDIVFLKIGDQIPADGLFLDG 272 (1044)
Q Consensus 193 ~~d~~~i~~~v~lv~~v~a~~~~~~~~~~~~l~~~~~~~~v~ViR~G~~~~I~~~dLvvGDIV~l~~Gd~VPADgili~g 272 (1044)
|+|++.|++.+++...++.+++++.++..++|.+. .+..++|+|||++++|+++||||||+|.+++||+|||||++++|
T Consensus 93 ~~~~~~I~~~v~i~~~l~~~qe~ka~~al~~L~~~-~~~~a~V~RdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~ll~g 171 (885)
T 3b8c_A 93 WQDFVGIICLLVINSTISFIEENNAGNAAAALMAG-LAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLEG 171 (885)
T ss_dssp CTTHHHHHHHTTTTTTTTTTTTTTTTTHHHHTTTS-CSCCCCCCCSSCSCCCCTTTTCTTSBCCCCSSCCCSSCCCCCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEEECEEEEEC
T ss_conf 88999999999999999999999999999997334-99869999999899989899798978998899999303599976
Q ss_pred CCEEEECCCCCCCCCCEEECCCCCCEEEECCEEEECCEEEEEEEECCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 73134167788999804305999961660416752706899989646144678975037899888935999999999999
Q 001616 273 HSLQVDESSMTGESDHVEVDSTNNPFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSSISSDSNERTPLQARLDKLTSTIG 352 (1044)
Q Consensus 273 ~~l~VDeS~LTGEs~pv~k~~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~la~~i~ 352 (1044)
+++.||||+|||||.|+.|. .++.+|+||.+.+|.+.++|++||.+|++|++.+++.+ ..+++|+|+.+++++.++.
T Consensus 172 ~~l~VdES~LTGES~Pv~K~--~g~~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~-~~~~~~lq~~~~~i~~~~~ 248 (885)
T 3b8c_A 172 DPLKVDQSALTGESLPVTKH--PGQEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDS-TNQVGHFQKVLTAIGNFCI 248 (885)
T ss_dssp SCBCCCCCSTTCCSSCCCBS--SCCCCCSCCCCCSCCCCCBCCSCTTTTTSTTCCCSCCS-CSCCSTTTTTTHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCEEEC--CCCCCCCCEEEEEEEEEEEEEECCCCCHHHHHHHHHHC-CCCCCHHHHHHHHHHHHHH
T ss_conf 75400344468888645834--89830267599511799999975730199999999864-6446849999999999999
Q ss_pred H-HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
Q ss_conf 9-999999999999999998327788888423479988720148899999999999999881341479999999999876
Q 001616 353 K-VGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKR 431 (1044)
Q Consensus 353 ~-~~l~~a~i~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~ilvvaiP~gLplavtl~la~s~~~ 431 (1044)
. +++.+++++++++ ++.+ . .+...+..++++++++|||+||+++++++++++.+
T Consensus 249 ~~~~~~~~~~~~~~~---~~~~--------~--------------~~~~~~~~~v~llv~aiP~aLp~~vti~la~g~~r 303 (885)
T 3b8c_A 249 CSIAIGMVIEIIVMY---PIQR--------R--------------KYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 303 (885)
T ss_dssp HHHHHHHHHHSTTTT---TTTC--------S--------------CSTTHHHHHHHHTTTTCCSSTTTHHHHTTTHHHHH
T ss_pred HHHHHHHHHHHHHHH---HHCC--------C--------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999---9806--------8--------------69999999999999970368999999999999999
Q ss_pred HCCCCCEECCCHHHHCCCCEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 21461000366111113570578407523223585399999941532113210147937999999997321775100158
Q 001616 432 MMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKFWLGQESIVQETYCKIASSIRDLFHQGVGLNTTGSVSKLK 511 (1044)
Q Consensus 432 l~k~~~lvr~~~a~E~lG~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~ln~~~~~~~~~ 511 (1044)
|.++|+++|+++++|+||++|+||||||||||+|+|+|.+.++. .+.. ..++ .+++.. .++|+..
T Consensus 304 ~ak~~ilvk~~~aiE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~--~~~~----~~~~--~~ll~~-aa~~~~~------ 368 (885)
T 3b8c_A 304 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVE--VFCK----GVEK--DQVLLF-AAMASRV------ 368 (885)
T ss_dssp HTTTSCCCSSGGGHHHHTTCCCCEEECCCCCSCCCCCCCSCCCC--SSCS----STTH--HHHHHH-HHHHCCS------
T ss_pred HHHCCEEECCCHHHHHHHCCCEEEECCCCCCCCCCEEEEEEEEE--CCCC----CCCH--HHHHHH-HHHHHCC------
T ss_conf 97198696895188897679989987998761685279987775--1589----9999--999999-9997278------
Q ss_pred CCCCCCEECCCHHHHHHHHHHHHHCCCCHHHHHHCCCEEEEECCCCCCCEEEEEEEECCCCEEEEEECCCHHHHHHHCCC
Q ss_conf 99985300389258999999999819875776310417898468899863899997469981899963827899972031
Q 001616 512 PGSSVAEFSGSPTEKAVLSWAVLEMGMEMDKVKQKYSILHVETFNSEKKRSGVLIRRKADNTTHIHWKGAAEIILAMCSH 591 (1044)
Q Consensus 512 ~~~~~~~~~g~p~e~All~~a~~~~g~~~~~~~~~~~il~~~~F~s~~krmsvvv~~~~~~~~~~~~KGa~e~Il~~c~~ 591 (1044)
..+||+|.|++.++. + ....+..++.++.+||+|.+|||+++++..+|. .+.++|||||.++++|+.
T Consensus 369 -------~~~~p~~~Al~~~~~-~----~~~~~~~~~~~~~~pF~s~~k~~sv~~~~~~g~-~~~~~KGa~e~il~~c~~ 435 (885)
T 3b8c_A 369 -------ENQDAIDAAMVGMLA-D----PKEARAGIREVHFLPFNPVDKRTALTYIDGSGN-WHRVSKGAPEQILELAKA 435 (885)
T ss_dssp -------SSCCSHHHHHHHTTC-C----TTCCCCSSCCBCCCCCCTTTCCCCCBBCSSSSC-BCBCCCCSGGGTSSSSCC
T ss_pred -------CCCCCHHHHHHHHHH-C----HHHHHHCCCEEECCCCCCCCCEEEEEEEECCCC-EEEEEECCHHHHHHHCCC
T ss_conf -------899915899999864-6----365762483220135785225689999804896-899994889999976458
Q ss_pred CCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHCCCCHHHHHHHHCCCCEEEEEEECCCCCCCHHHH
Q ss_conf 22359905038955599999999999750120010356214701111430178754200269089997334599952179
Q 001616 592 YYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAYNNDVKARQRLKEEGLTLLGIVGIKDPCRPGVQ 671 (1044)
Q Consensus 592 ~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~~A~k~l~~~~~~~~~~~~~~~~~~e~~l~llGiigi~DplR~~v~ 671 (1044)
+++.++.+.+.+++++++|+|++++||+++++++ .+..|++++++|+++++||+||+++
T Consensus 436 -----------~~~~~~~~~~~~~~~a~~G~rvl~vA~~~~~~~~----------~~~~e~~l~~lGli~i~Dp~R~~a~ 494 (885)
T 3b8c_A 436 -----------SNDLSKKVLSIIDKYAERGLRSLAVARQVVPEKT----------KESPGAPWEFVGLLPLFDPPRHDSA 494 (885)
T ss_dssp -----------CSTTTTTHHHHHHHHTTTTCEEEEECCBCCCSSS----------SSCCCCCCCCCEEEEECCCCCHHHH
T ss_pred -----------CHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCC----------CCCCCCCCEEEEEEEEECCCCHHHH
T ss_conf -----------6445799999999998579869999994466433----------1113567579999996066612089
Q ss_pred HHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCEEECCHHHHC-CCHHHHHHHHCCCCEEEECCHHHHHH
Q ss_conf 99999996697899994899888999999909866666565532430253304-89899999740211784129432999
Q 001616 672 KAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRN-YTDEERIQKVDKIRVMARSSPFDKLL 750 (1044)
Q Consensus 672 ~aI~~l~~aGI~v~miTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~-~~~~~~~~~~~~~~V~ar~sP~~K~~ 750 (1044)
++|+.|+++||+++|+||||..||++||+++||.... ....+++|.+++. ++++++.+.+++..||+|++|+||.+
T Consensus 495 ~aI~~l~~aGI~v~MiTGD~~~tA~~iA~~lGi~~~~---~~~~~l~g~~~~~~~~~~~l~~~~~~~~v~arv~P~~K~~ 571 (885)
T 3b8c_A 495 ETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNM---YPSSALLGTHKDANLASIPVEELIEKADGFAGVFPEHKYE 571 (885)
T ss_dssp HHHHHHHHTTCCCEEEESSCHHHHTHHHHTTTCTTCC---STTSSCCBGGGGTTSCCSCHHHHHHTSCCEECCCHHHHHH
T ss_pred HHHHHHHHCCCCEEEECCCCHHHHHHHHHHHCCCCCC---CCCCEEECCCCCCCCCHHHHHHHHHHCCEEEEECHHHHHH
T ss_conf 9999999769968999399869999999980976466---7751445553122246357999986386898878999999
Q ss_pred HHHHHHHCCCEEEEECCCCCCHHHHHHCCCCEEECCCCHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999865999999939958988874189216507886088864068897169905899999996888784799999999
Q 001616 751 MVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLRWGRCVYTNIQKFIQFQL 830 (1044)
Q Consensus 751 lV~~Lq~~g~vVa~iGDG~NDapaLk~AdVGiamg~~gt~vAk~aaDivlldd~f~sI~~~i~~GR~~~~nI~k~i~f~l 830 (1044)
+|+.+|++|++|+|+|||+||+|||++|||||||| +|+++||++||++++||+|++|+.++++||++|+||+|++.|++
T Consensus 572 iV~~lq~~g~~Vam~GDGvNDapaLk~AdvGIAmg-~gtd~ak~aADivl~~~~~~~I~~ai~~gR~~~~ni~~~i~~~l 650 (885)
T 3b8c_A 572 IVKKLQERKHIVGMTGDGVNDAPALKKADIGIAVA-DATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAV 650 (885)
T ss_dssp HHHHHHHTTCCCCBCCCSSTTHHHHHHSSSCCCCS-SSHHHHGGGCSSCCSSCSHHHHTHHHHTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCEEEEECCCCHHHHHHHHCCEEEEEC-CCCHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999977996999759812299998699759957-71299998434013357666899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 99999999999999945998456999999863456898878156899920104999999999636999999999999999
Q 001616 831 TVNVAALVINFIAAVSAGEVPLTAVQLLWVNLIMDTLGALALATDRPTDELMQRPPVGRTEPLITNIMWRNLLSQALYQI 910 (1044)
Q Consensus 831 ~~Nv~~~~~~~~~~~~~~~~pl~~vqlL~vnli~d~l~alala~e~p~~~lm~r~P~~r~~~li~~~m~~~i~~~~~~q~ 910 (1044)
++|+..++.. +......+.|++++|++|+|+++|..+ +++++|++.+. ++| +...+ +.++...+..++++.
T Consensus 651 ~~n~~~~~~~-~~~~~~~~~~l~p~~il~i~l~~d~~~-l~l~~~~~~~~---~~p---~~~~~-~~~~~~~~~~g~~~~ 721 (885)
T 3b8c_A 651 SITIRIVFGF-MLIALIWEFDFSAFMVLIIAILNDGTI-MTISKDRVKPS---PTP---DSWKL-KEIFATGVVLGGYQA 721 (885)
T ss_dssp HHTTTTTSTT-HHHHSSCSSCSCHHHHHHHHHHHHTTT-CCCCCCCCCCS---SCC---CSTTT-TTTTTTHHHHHSSTH
T ss_pred HHHHHHHHHH-HHHHHCCCCCCCHHHHHHHHHHHHHHH-HHHCCCCCCCC---CCC---CCHHH-HHHHHHHHHHHHHHH
T ss_conf 9999999999-999970386758899999999987778-74046546754---587---30358-999999999999999
Q ss_pred HHHHHHHHHCCC------CCCCC-----CCCC-CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 999999974012------35889-----5543-31235599999998876541246544333565407799999999999
Q 001616 911 TILLILQFKGES------IFNVS-----PEVN-DTLIFNTFVFCQVFNEFNARKLEKRNVFKGIHKNKLFLGIIGITVVL 978 (1044)
Q Consensus 911 ~v~~~l~~~~~~------~~~~~-----~~~~-~t~~f~~fv~~qifn~~n~r~~~~~~~f~~~~~n~~f~~~i~~~~~~ 978 (1044)
+..+.+++.+.. .++.+ .... .++.|.+++++|+ +.+|+|+.. .++|+.. .|++.+.+++..+++
T Consensus 722 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~-~~~~~Rs~~-~~~~~~~-~~~~~~~~~~~~~~~ 798 (885)
T 3b8c_A 722 IMTVIFFWAAHKTDFFSDTFGVRSIRDNNHELMGAVYLQVSIISQA-LIFVTRSRS-WSFVERP-GALLMIAFLIAQLIA 798 (885)
T ss_dssp HHHTTSSSCTTTTTTTTCCCCSSCCGGGTHHHHTTTTTTTSSTTGG-GTTCSSSCT-TTSTTST-TTTTSGGGSSTTTTT
T ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH-HHHHHCCCC-CCCCCCC-CHHHHHHHHHHHHHH
T ss_conf 9999999999973765223575411022999999999999999999-999764588-8701186-499999999999999
Q ss_pred HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 99998984672205888868799999999899999987432325
Q 001616 979 QVVMVEFLKKFADTERLNWQQWLACIAMAAFTWPIGWAVKFIPV 1022 (1044)
Q Consensus 979 q~~~v~~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~~~~k~i~~ 1022 (1044)
|++.+.+...||+++|++|.+|+++++++++.+++.++.|++..
T Consensus 799 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~e~~k~~~~ 842 (885)
T 3b8c_A 799 TLIAVYANWEFAKIRGIGWGWAGVIWLYSIVTYFPLDVFKFAIR 842 (885)
T ss_dssp TSSSSSCCCCSSCCCCCTTTTHHHHHHHTGGGTHHHHHHHHHHT
T ss_pred HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99998602210313776099999999999999999999999999
No 6
>3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp}
Probab=1.00 E-value=1 Score=737.91 Aligned_cols=580 Identities=24% Similarity=0.357 Sum_probs=458.9
Q ss_pred CCCHHHHHHHHHHHHH-HHHHHHHHH--HHHHH--------CCCC------CCCCCCCCCHHHHHHHHHHH-HHHHHHHH
Q ss_conf 9839999999954568-999999999--98820--------1245------79876533025788999999-99967899
Q 001616 153 PKGLLHFVLEAFKDTT-ILILLVCAA--LSLGF--------GIKE------HGAEEGWYEGGSIFVAVFLV-IVVSAFSN 214 (1044)
Q Consensus 153 ~~~~~~~~~~~~~~~~-~~il~v~a~--isl~~--------g~~~------~~~~~~~~d~~~i~~~v~lv-~~v~a~~~ 214 (1044)
+.+|++-.|++++... ++-++++.. .++++ ++.. .+....|+|..++++.++++ -.++...+
T Consensus 130 g~~f~~~a~~~l~~~~~~md~Lv~l~~~~a~~~S~~~~~~~~~~~~~~~~~~~~~~~yfe~a~~ii~~~llg~~le~~a~ 209 (736)
T 3rfu_A 130 GWPFFKRGWQSLKTGQLNMFTLIAMGIGVAWIYSMVAVLWPGVFPHAFRSQEGVVAVYFEAAAVITTLVLLGQVLELKAR 209 (736)
T ss_dssp THHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHHCGGGSCSSSSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 38999999999985589759999999999999999998631004420013567643089999999999999999999999
Q ss_pred HHHHHHHHHHHCCCCCCEEEEEE-CCEEEEEEECCCCCCCEEEECCCCEEECCEEEEECCCEEEECCCCCCCCCCEEECC
Q ss_conf 99999998961102795379996-99699976056444919995799955021799842731341677889998043059
Q 001616 215 FRQARQFDKLSKISNNIKVEVVR-EARRLQISIFDLVVGDIVFLKIGDQIPADGLFLDGHSLQVDESSMTGESDHVEVDS 293 (1044)
Q Consensus 215 ~~~~~~~~~l~~~~~~~~v~ViR-~G~~~~I~~~dLvvGDIV~l~~Gd~VPADgili~g~~l~VDeS~LTGEs~pv~k~~ 293 (1044)
.+.++..++|.+. .+..++|+| ||++++|+++||+|||+|.+++||+|||||++++|++ .||||+|||||.|+.|.
T Consensus 210 ~~~~~ai~~L~~l-~p~~a~vv~~dg~~~~v~~~~l~~GDiv~v~~Ge~IPaDg~vl~G~~-~VDES~LTGES~Pv~K~- 286 (736)
T 3rfu_A 210 EQTGSAIRALLKL-VPESAHRIKEDGSEEEVSLDNVAVGDLLRVRPGEKIPVDGEVQEGRS-FVDESMVTGEPIPVAKE- 286 (736)
T ss_dssp CCCSSHHHHHTCC-CCCEEEEEETTEEEEEEETTTCCTTCEECCCSSEECCSCEEECSSCE-EEECSSSTTCSSCEEEC-
T ss_pred HHHHHHHHHHHHC-CCCEEEEEECCCEEEEEEHHHCCCCCEEEECCCCCCCCCEEEEECCE-EEEECCCCCCCCCEEEC-
T ss_conf 9999999998833-99889999529989998776689898899879975156379997866-76512357861427831-
Q ss_pred CCCCEEEECCEEEECCEEEEEEEECCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 99961660416752706899989646144678975037899888935999999999999999999999999999999832
Q 001616 294 TNNPFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSSISSDSNERTPLQARLDKLTSTIGKVGLAVAFLVLVVLLARYFTG 373 (1044)
Q Consensus 294 ~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~la~~i~~~~l~~a~i~~iv~~~~~~~~ 373 (1044)
.++.+++||.+.+|.+.++|+++|.+|.+|++.+++.+++.+++|+|+..|+++.++.++.+.+++++|++|.. .+
T Consensus 287 -~gd~v~~Gt~~~~G~~~~~v~~~G~~T~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~v~~vl~ia~~~~~~w~~---~~ 362 (736)
T 3rfu_A 287 -ASAKVIGATINQTGSFVMKALHVGSDTMLARIVQMVSDAQRSRAPIQRLADTVSGWFVPAVILVAVLSFIVWAL---LG 362 (736)
T ss_dssp -TTCEECTTCEEESCCCCEEECCCSTTSHHHHHHHHHHHHHSSCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH---HC
T ss_pred -CCCCCCCCEEECCCEEEEEEEEECHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HC
T ss_conf -68867786486145099999984122599999999997432689799999999999999999999999999999---67
Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHCCCCEEE
Q ss_conf 77888884234799887201488999999999999998813414799999999998762146100036611111357057
Q 001616 374 NTKGENGIKEYNGSNTDIDDVFNAVVSIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMTDQAMVRKLPACETMGSATV 453 (1044)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~ilvvaiP~gLplavtl~la~s~~~l~k~~~lvr~~~a~E~lG~v~~ 453 (1044)
.. . .+...+..++++++++|||+|++++|+++..++.++.++|+++|+++++|+||++|+
T Consensus 363 ~~------~--------------~~~~~l~~ai~vlviacPcaL~la~p~a~~~~~~~~a~~gilvk~~~alE~l~~v~~ 422 (736)
T 3rfu_A 363 PQ------P--------------ALSYGLIAAVSVLIIACPCALGLATPMSIMVGVGKGAQSGVLIKNAEALERMEKVNT 422 (736)
T ss_dssp SS------S--------------STTHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHHHHHHTTEEESCHHHHHHHTSCCE
T ss_pred CC------C--------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECHHHHHHHHCCCCE
T ss_conf 87------3--------------299999998774877324278888999999999997515133233789998627999
Q ss_pred EEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHH
Q ss_conf 84075232235853999999415321132101479379999999973217751001589998530038925899999999
Q 001616 454 ICTDKTGTLTLNQMKVTKFWLGQESIVQETYCKIASSIRDLFHQGVGLNTTGSVSKLKPGSSVAEFSGSPTEKAVLSWAV 533 (1044)
Q Consensus 454 Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~ln~~~~~~~~~~~~~~~~~~g~p~e~All~~a~ 533 (1044)
||||||||||+|+|+|.+++..+. . + .+.+....++. ..+.||+++|+++++.
T Consensus 423 i~fDKTGTLT~g~~~v~~i~~~~~--~--------~--~~~l~~aa~le---------------~~s~hPla~Aiv~~a~ 475 (736)
T 3rfu_A 423 LVVDKTGTLTEGHPKLTRIVTDDF--V--------E--DNALALAAALE---------------HQSEHPLANAIVHAAK 475 (736)
T ss_dssp EEECCBTTTBCSSCEEEEEEESSS--C--------H--HHHHHHHHHHH---------------HSSCCHHHHHHHHHHH
T ss_pred EEEECCCCCCCCCEEEEEEEECCC--C--------H--HHHHHHHHHHH---------------HCCCCHHHHHHHHHHH
T ss_conf 998189887589527999983488--7--------7--89999999986---------------2289928999999999
Q ss_pred HHCCCCHHHHHHCCCEEEEECCCCCCCEEEEEEEECCCCEEEEEECCCHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHH
Q ss_conf 98198757763104178984688998638999974699818999638278999720312235990503895559999999
Q 001616 534 LEMGMEMDKVKQKYSILHVETFNSEKKRSGVLIRRKADNTTHIHWKGAAEIILAMCSHYYESNGVIKSMDGNGRSQMENI 613 (1044)
Q Consensus 534 ~~~g~~~~~~~~~~~il~~~~F~s~~krmsvvv~~~~~~~~~~~~KGa~e~Il~~c~~~~~~~g~~~~l~~~~~~~~~~~ 613 (1044)
+.+... ....+|++.+++. +... .++.. +.+|+++.+.+.+.. ...+.+.
T Consensus 476 -~~~~~~---------~~~~~f~~~~g~g-v~~~-~~g~~---~~~G~~~~~~~~~~~---------------~~~~~~~ 525 (736)
T 3rfu_A 476 -EKGLSL---------GSVEAFEAPTGKG-VVGQ-VDGHH---VAIGNARLMQEHGGD---------------NAPLFEK 525 (736)
T ss_dssp -TTCCCC---------CCCSCCCCCTTTE-EEEC-SSSSC---EEEESHHHHHHHCCC---------------CHHHHHH
T ss_pred -HCCCCC---------CCCCCCCCCCCCE-EEEE-ECCEE---EEECCHHHHHHCCCC---------------HHHHHHH
T ss_conf -659986---------6754320248865-8999-99989---997389999873997---------------1678999
Q ss_pred HHHHHHCCCCEEEEEEEECCCHHHCCCCHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEECCCCHH
Q ss_conf 99997501200103562147011114301787542002690899973345999521799999999669789999489988
Q 001616 614 IHGMAASSLRCIAFAYKQVSEEETAYNNDVKARQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVF 693 (1044)
Q Consensus 614 i~~~a~~glR~l~~A~k~l~~~~~~~~~~~~~~~~~~e~~l~llGiigi~DplR~~v~~aI~~l~~aGI~v~miTGD~~~ 693 (1044)
.++++.+|+|++++|+ |.+++|+++++|++||+++++|+.|+++|++++|+|||+..
T Consensus 526 ~~~~~~~G~~vl~va~-----------------------d~~~~G~i~i~D~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~ 582 (736)
T 3rfu_A 526 ADELRGKGASVMFMAV-----------------------DGKTVALLVVEDPIKSSTPETILELQQSGIEIVMLTGDSKR 582 (736)
T ss_dssp HHHHHHTTCEEEEEEE-----------------------TTEEEEEEEEECCBCSSHHHHHHHHHHHTCEEEEECSSCHH
T ss_pred HHHHHHCCCEEEEEEE-----------------------CCEEEEEEEEECCCHHHHHHHHHHHHHCCCEEEEECCCCHH
T ss_conf 9999856986999987-----------------------99899999850322030999999999879949998798989
Q ss_pred HHHHHHHHCCCCCCCCCCCCCEEECCHHHHCCCHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHCCCEEEEECCCCCCHH
Q ss_conf 89999999098666665655324302533048989999974021178412943299999999865999999939958988
Q 001616 694 TAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAP 773 (1044)
Q Consensus 694 tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~sP~~K~~lV~~Lq~~g~vVa~iGDG~NDap 773 (1044)
+|.++|+++||.. ++++++|+||..+|+.+|+.|+.|+|+|||.||+|
T Consensus 583 ~a~~ia~~lgi~~--------------------------------v~a~~~P~~K~~~v~~l~~~g~~V~~vGDG~ND~p 630 (736)
T 3rfu_A 583 TAEAVAGTLGIKK--------------------------------VVAEIMPEDKSRIVSELKDKGLIVAMAGDGVNDAP 630 (736)
T ss_dssp HHHHHHHHHTCCC--------------------------------EECSCCHHHHHHHHHHHHHHSCCEEEEECSSTTHH
T ss_pred HHHHHHHHCCCCE--------------------------------EEEECCHHHHHHHHHHHHHCCCEEEEEECCHHHHH
T ss_conf 9999999859987--------------------------------99706999999999999966998999989857699
Q ss_pred HHHHCCCCEEECCCCHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HCC--CC
Q ss_conf 874189216507886088864068897169905899999996888784799999999999999999999999-459--98
Q 001616 774 ALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLRWGRCVYTNIQKFIQFQLTVNVAALVINFIAAV-SAG--EV 850 (1044)
Q Consensus 774 aLk~AdVGiamg~~gt~vAk~aaDivlldd~f~sI~~~i~~GR~~~~nI~k~i~f~l~~Nv~~~~~~~~~~~-~~~--~~ 850 (1044)
||++||+||||| +|+++++++||++++++++..|+.++++||++++||++++.|++.||+++++++....+ +.| -+
T Consensus 631 aL~~AdvGIAmg-~g~d~a~~~AD~vl~~~~~~~i~~ai~~sr~t~~~i~qnl~~a~~yN~~~iplAag~l~p~~G~~l~ 709 (736)
T 3rfu_A 631 ALAKADIGIAMG-TGTDVAIESAGVTLLHGDLRGIAKARRLSESTMSNIRQNLFFAFIYNVLGVPLAAGVLYPLTGLLLS 709 (736)
T ss_dssp HHHHSSEEEEES-SSCSHHHHHCSEEECSCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSTTTSSCCCC
T ss_pred HHHHCCEEEEEC-CCCHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
T ss_conf 998699779947-8659999769999926987899999999999999999999999999999999999878775043132
Q ss_pred CHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 4569999998634568988781
Q 001616 851 PLTAVQLLWVNLIMDTLGALAL 872 (1044)
Q Consensus 851 pl~~vqlL~vnli~d~l~alal 872 (1044)
|+.+.-....+-+.-.+-++-|
T Consensus 710 P~~aa~~m~~Ssv~Vv~nslrl 731 (736)
T 3rfu_A 710 PMIAAAAMALSSVSVIINALRL 731 (736)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999974399999998986
No 7
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=1.00 E-value=1 Score=712.83 Aligned_cols=531 Identities=26% Similarity=0.362 Sum_probs=431.5
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHCCCCCCEEEEEECCEEEEEEECCCCCCCEEEECCCCEEEC
Q ss_conf 3302578899999999967899999999-------989611027953799969969997605644491999579995502
Q 001616 193 WYEGGSIFVAVFLVIVVSAFSNFRQARQ-------FDKLSKISNNIKVEVVREARRLQISIFDLVVGDIVFLKIGDQIPA 265 (1044)
Q Consensus 193 ~~d~~~i~~~v~lv~~v~a~~~~~~~~~-------~~~l~~~~~~~~v~ViR~G~~~~I~~~dLvvGDIV~l~~Gd~VPA 265 (1044)
|||..++++.++++ .+|.+.++ .+++.+. .+..++|+|||++++|+++||+|||+|.+++||+|||
T Consensus 173 ~~~~~~~i~~~~~i------g~~le~~~~~~~~~~i~~l~~l-~~~~a~v~r~g~~~~i~~~~l~~GDiv~v~~Ge~IPa 245 (723)
T 3j09_A 173 FYETSVLLLAFLLL------GRTLEARAKSRTGEAIKKLVGL-QAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPV 245 (723)
T ss_dssp CCTTHHHHHHHHHH------HHHHHHHHHTTCCCTTHHHHHT-SCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCS
T ss_pred HHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHC-CCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEEE
T ss_conf 99999999999999------9999999999999999888726-9975699989989998989979998999889998856
Q ss_pred CEEEEECCCEEEECCCCCCCCCCEEECCCCCCEEEECCEEEECCEEEEEEEECCCCHHHHHHHHCCCCCCCCCHHHHHHH
Q ss_conf 17998427313416778899980430599996166041675270689998964614467897503789988893599999
Q 001616 266 DGLFLDGHSLQVDESSMTGESDHVEVDSTNNPFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSSISSDSNERTPLQARLD 345 (1044)
Q Consensus 266 Dgili~g~~l~VDeS~LTGEs~pv~k~~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~ 345 (1044)
||++++|++ .||||+|||||.|+.|. .++.+++||.+.+|.+.++|+++|.+|.+|++++++.+...+++|+|+.++
T Consensus 246 Dg~vl~G~~-~VdeS~LTGES~pv~K~--~g~~v~~Gt~~~~g~~~~~v~~~g~~T~l~~i~~lv~~a~~~k~~~~~~~d 322 (723)
T 3j09_A 246 DGVVVEGES-YVDESMISGEPVPVLKS--KGDEVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLAD 322 (723)
T ss_dssp EEEEEECCE-EEECHHHHCCSSCEEEC--TTCEECTTCEECSSCEEEEEEECGGGSHHHHHHHHHSSSCCSCCHHHHHHH
T ss_pred EEEEEECCE-EEECCCCCCCCCCEEEC--CCCEECCCEEEECCCEEEEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHH
T ss_conf 799997776-88600013887646636--898230416970672999999846743999999999975346983899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
Q ss_conf 99999999999999999999999998327788888423479988720148899999999999999881341479999999
Q 001616 346 KLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAAAVTIVVVAIPEGLPLAVTLTL 425 (1044)
Q Consensus 346 ~la~~i~~~~l~~a~i~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~ilvvaiP~gLplavtl~l 425 (1044)
+++.++.++.+.++++++++|. +... . .+...+..++++++++|||+|++++|+++
T Consensus 323 ~~~~~~~~~vl~~a~~~~~~~~---~~~~-------~--------------~~~~~~~~~i~vlvia~P~aL~la~p~a~ 378 (723)
T 3j09_A 323 KVVAYFIPTVLLVAISAFIYWY---FIAH-------A--------------PLLFAFTTLIAVLVVACPCAFGLATPTAL 378 (723)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSC---SSTT-------C--------------TTCCSHHHHHHHHHHHSCTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH---HHCC-------C--------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999999999---8568-------8--------------69999999999997502678999999999
Q ss_pred HHHHHHHCCCCCEECCCHHHHCCCCEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC
Q ss_conf 99987621461000366111113570578407523223585399999941532113210147937999999997321775
Q 001616 426 AYSMKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKFWLGQESIVQETYCKIASSIRDLFHQGVGLNTTG 505 (1044)
Q Consensus 426 a~s~~~l~k~~~lvr~~~a~E~lG~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~ln~~~ 505 (1044)
..++.++.++|+++|+++++|+||++++||||||||||+|+|+|.+++..+.. ..+++.....+.
T Consensus 379 ~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~g~~~v~~~~~~~~~------------~~~~l~~aa~~e--- 443 (723)
T 3j09_A 379 TVGMGKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNGD------------ERELLRLAAIAE--- 443 (723)
T ss_dssp HHHHHHHHTTTCEESSTTHHHHGGGCCEEEEEHHHHTSCSCCEEEEEEESSSC------------HHHHHHHHHHHH---
T ss_pred HHHHHHHHHCCEEEECHHHHHHHHCCCEEEECCCCCCCCCCEEEEEEEECCCC------------HHHHHHHHHHHH---
T ss_conf 99999999889389482899876249899984777552696279999807999------------899999999985---
Q ss_pred CCCCCCCCCCCCEECCCHHHHHHHHHHHHHCCCCHHHHHHCCCEEEEECCCCCCCEEEEEEEECCCCEEEEEECCCHHHH
Q ss_conf 10015899985300389258999999999819875776310417898468899863899997469981899963827899
Q 001616 506 SVSKLKPGSSVAEFSGSPTEKAVLSWAVLEMGMEMDKVKQKYSILHVETFNSEKKRSGVLIRRKADNTTHIHWKGAAEII 585 (1044)
Q Consensus 506 ~~~~~~~~~~~~~~~g~p~e~All~~a~~~~g~~~~~~~~~~~il~~~~F~s~~krmsvvv~~~~~~~~~~~~KGa~e~I 585 (1044)
..+.||++.|+++++. +.+.+.... .+|++...+ ++.. . .+.+|+++.+
T Consensus 444 ------------~~s~hP~~~Ai~~~a~-~~~~~~~~~---------~~~~~~~g~-g~~~-----~---~~~~g~~~~~ 492 (723)
T 3j09_A 444 ------------RRSEHPIAEAIVKKAL-EHGIELGEP---------EKVEVIAGE-GVVA-----D---GILVGNKRLM 492 (723)
T ss_dssp ------------TTCCSHHHHHHHHHHH-HTTCCCCSC---------CCCEEETTT-EEEE-----T---TEEEECHHHH
T ss_pred ------------CCCCCCHHHHHHHHHH-HCCCCCCCC---------CCEEEECCC-CEEE-----E---EEEECCHHHH
T ss_conf ------------0499954289999998-549985786---------445996698-1699-----9---9997789999
Q ss_pred HHHCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHCCCCHHHHHHHHCCCCEEEEEEECCCCC
Q ss_conf 97203122359905038955599999999999750120010356214701111430178754200269089997334599
Q 001616 586 LAMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAYNNDVKARQRLKEEGLTLLGIVGIKDP 665 (1044)
Q Consensus 586 l~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~~A~k~l~~~~~~~~~~~~~~~~~~e~~l~llGiigi~Dp 665 (1044)
.+.... ..+.+.+.++.++.+|+|++++|+ |++++|+++++|+
T Consensus 493 ~~~~~~--------------~~~~~~~~~~~~~~~g~~~~~va~-----------------------~~~~~G~i~i~D~ 535 (723)
T 3j09_A 493 EDFGVA--------------VSNEVELALEKLEREAKTAVIVAR-----------------------NGRVEGIIAVSDT 535 (723)
T ss_dssp HHTTCC--------------CCHHHHHHHHHHHTTTCEEEEEEE-----------------------TTEEEEEEEEECC
T ss_pred HHCCCC--------------CCHHHHHHHHHHHHCCCEEEEEEE-----------------------CCEEEEEEEECCC
T ss_conf 754998--------------608999999999855982899978-----------------------9999999960687
Q ss_pred CCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCEEECCHHHHCCCHHHHHHHHCCCCEEEECCH
Q ss_conf 95217999999996697899994899888999999909866666565532430253304898999997402117841294
Q 001616 666 CRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSP 745 (1044)
Q Consensus 666 lR~~v~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~sP 745 (1044)
+||+++++|+.|+++|++++|+|||+..+|.++|+++||.. ++++++|
T Consensus 536 ~~~~~~~~i~~l~~~Gi~v~~~TGd~~~~a~~ia~~lgi~~--------------------------------~~~~~~P 583 (723)
T 3j09_A 536 LKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL--------------------------------VIAEVLP 583 (723)
T ss_dssp SCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE--------------------------------EECSCCT
T ss_pred CCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCE--------------------------------EECCCCH
T ss_conf 52569999999997799799999989899999999859938--------------------------------9926899
Q ss_pred HHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCCCEEECCCCHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 32999999998659999999399589888741892165078860888640688971699058999999968887847999
Q 001616 746 FDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLRWGRCVYTNIQKF 825 (1044)
Q Consensus 746 ~~K~~lV~~Lq~~g~vVa~iGDG~NDapaLk~AdVGiamg~~gt~vAk~aaDivlldd~f~sI~~~i~~GR~~~~nI~k~ 825 (1044)
+||..+|+.+|+. +.|+|+|||.||+|||++||+||||| +|+++|+++||+++++|++..++.++++||++++||+++
T Consensus 584 ~~K~~~v~~l~~~-~~v~~vGDg~ND~~al~~A~vgiamg-~g~~~a~~~AD~vl~~~~~~~i~~~i~~~r~~~~~i~~n 661 (723)
T 3j09_A 584 HQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIKQN 661 (723)
T ss_dssp TCHHHHHHHHTTT-CCEEEEECSSTTHHHHHHSSEEEECC-CCSCCSSCCSSEECSSCCTTHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHCCEEEEEC-CCCHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999998349-93999989823099995499879967-875999986999996799889999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHC---CCCCHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 9999999999999999999945---998456999999863456898878156
Q 001616 826 IQFQLTVNVAALVINFIAAVSA---GEVPLTAVQLLWVNLIMDTLGALALAT 874 (1044)
Q Consensus 826 i~f~l~~Nv~~~~~~~~~~~~~---~~~pl~~vqlL~vnli~d~l~alala~ 874 (1044)
+.|++++|++++++++.+.... .-.|..+.-....+-+...+.++-|-.
T Consensus 662 l~~a~~~n~~~i~~a~~~~~~~~g~~l~p~~a~~~m~~ss~~vv~nslrl~~ 713 (723)
T 3j09_A 662 IFWALIYNVILIPAAAGLLYPIFGVVFRPEFAGLAMAMSSVSVVANSLLLRN 713 (723)
T ss_dssp HHHHHHHHHHHHHHHHHTTSSCCCCSCCHHHHHHHHHTHHHHHHHHTTSCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHCC
T ss_conf 9999999999999999756540155148899999981548999997787526
No 8
>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=1.00 E-value=1 Score=704.23 Aligned_cols=532 Identities=26% Similarity=0.358 Sum_probs=430.9
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHCCCCCCEEEEEECCEEEEEEECCCCCCCEEEECCCCEEE
Q ss_conf 533025788999999999678999999999-------8961102795379996996999760564449199957999550
Q 001616 192 GWYEGGSIFVAVFLVIVVSAFSNFRQARQF-------DKLSKISNNIKVEVVREARRLQISIFDLVVGDIVFLKIGDQIP 264 (1044)
Q Consensus 192 ~~~d~~~i~~~v~lv~~v~a~~~~~~~~~~-------~~l~~~~~~~~v~ViR~G~~~~I~~~dLvvGDIV~l~~Gd~VP 264 (1044)
.|||..++++.++++ .+|.+.++. +++.+. .+..++|+|||++++|+++||+|||+|.+++||+||
T Consensus 94 ~~~~~~~~i~~~~~i------g~~le~~~~~~~~~~l~~l~~l-~~~~a~v~r~g~~~~i~~~~l~~GDiv~v~~Ge~IP 166 (645)
T 3j08_A 94 SFYETSVLLLAFLLL------GRTLEARAKSRTGEAIKKLVGL-QAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIP 166 (645)
T ss_dssp SCCCSHHHHHHHHHH------HHHHHHHHHCCCCCCCHHHHHT-SCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCC
T ss_pred HHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHCC-CCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEE
T ss_conf 599999999999999------9999999999999999998617-999799999997999889997989999988999886
Q ss_pred CCEEEEECCCEEEECCCCCCCCCCEEECCCCCCEEEECCEEEECCEEEEEEEECCCCHHHHHHHHCCCCCCCCCHHHHHH
Q ss_conf 21799842731341677889998043059999616604167527068999896461446789750378998889359999
Q 001616 265 ADGLFLDGHSLQVDESSMTGESDHVEVDSTNNPFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSSISSDSNERTPLQARL 344 (1044)
Q Consensus 265 ADgili~g~~l~VDeS~LTGEs~pv~k~~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l 344 (1044)
|||++++|++ .||||+|||||.|+.|. .++.+++||.+.+|.+.++|+++|.+|.+|++++++.+...+++|+|+..
T Consensus 167 aDg~vl~G~~-~VdeS~LTGES~Pv~K~--~g~~v~~Gt~~~~g~~~~~v~~~G~~T~l~~i~~lv~~a~~~k~~~~~~~ 243 (645)
T 3j08_A 167 VDGVVVEGES-YVDESMISGEPVPVLKS--KGDEVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLA 243 (645)
T ss_dssp SEEEEEECCE-EEECHHHHCCSSCEEEC--TTCEECTTCEECSSCEEEEEEECGGGSHHHHHHHHHSCCCCCCCSHHHHH
T ss_pred EEEEEEECCE-EEECCCCCCCCCCEECC--CCCEEECCEEEECCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHH
T ss_conf 6899998868-99802246998765608--99974166798257299999972774599999999997314698589999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
Q ss_conf 99999999999999999999999999832778888842347998872014889999999999999988134147999999
Q 001616 345 DKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAAAVTIVVVAIPEGLPLAVTLT 424 (1044)
Q Consensus 345 ~~la~~i~~~~l~~a~i~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~ilvvaiP~gLplavtl~ 424 (1044)
++++.++.++.+.++++++++|. +... ..| ...+..++++++++|||+||+++|++
T Consensus 244 d~~~~~~~~~vl~~a~~~~~~~~---~~~~-------~~~--------------~~~~~~~i~vlvia~P~aL~la~p~a 299 (645)
T 3j08_A 244 DKVVAYFIPTVLLVAISAFIYWY---FIAH-------APL--------------LFAFTTLIAVLVVACPCAFGLATPTA 299 (645)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCSS---CCCS-------CSC--------------CCTTTTTHHHHHHHSCTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH---HHCC-------CCH--------------HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999---9569-------869--------------99999999999987366899999999
Q ss_pred HHHHHHHHCCCCCEECCCHHHHCCCCEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCC
Q ss_conf 99998762146100036611111357057840752322358539999994153211321014793799999999732177
Q 001616 425 LAYSMKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKFWLGQESIVQETYCKIASSIRDLFHQGVGLNTT 504 (1044)
Q Consensus 425 la~s~~~l~k~~~lvr~~~a~E~lG~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~ln~~ 504 (1044)
+..++.++.++|+++|+++++|+||++++||||||||||+|+|+|.+++..+.. ..+.+.....+.
T Consensus 300 ~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~~~~~~~~------------~~~~l~~aa~~e-- 365 (645)
T 3j08_A 300 LTVGMGKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNGD------------ERELLRLAAIAE-- 365 (645)
T ss_dssp HHHHHHHHHTTCCCCSSTTHHHHGGGCCEEEEEGGGTSSSSCCEEEEEEESSSC------------HHHHHHHHHHHH--
T ss_pred HHHHHHHHHHCCEEECCCHHHHHHHCCCEEEECCCCCCCCCCEEEEEEEECCCC------------HHHHHHHHHHHH--
T ss_conf 999999999779376681699986279999986866655897079999817999------------799999999975--
Q ss_pred CCCCCCCCCCCCCEECCCHHHHHHHHHHHHHCCCCHHHHHHCCCEEEEECCCCCCCEEEEEEEECCCCEEEEEECCCHHH
Q ss_conf 51001589998530038925899999999981987577631041789846889986389999746998189996382789
Q 001616 505 GSVSKLKPGSSVAEFSGSPTEKAVLSWAVLEMGMEMDKVKQKYSILHVETFNSEKKRSGVLIRRKADNTTHIHWKGAAEI 584 (1044)
Q Consensus 505 ~~~~~~~~~~~~~~~~g~p~e~All~~a~~~~g~~~~~~~~~~~il~~~~F~s~~krmsvvv~~~~~~~~~~~~KGa~e~ 584 (1044)
..+.||++.|+++++. +.|.+.... .+|++..++ ++.. . .+.+|+++.
T Consensus 366 -------------~~s~hPla~Aiv~~a~-~~g~~~~~~---------~~~~~~~g~-g~~~-----~---~v~~g~~~~ 413 (645)
T 3j08_A 366 -------------RRSEHPIAEAIVKKAL-EHGIELGEP---------EKVEVIAGE-GVVA-----D---GILVGNKRL 413 (645)
T ss_dssp -------------TTCCSHHHHHHHHHHH-HTTCCCCSC---------CCCEEETTT-EEEE-----T---TEEEECHHH
T ss_pred -------------HCCCCHHHHHHHHHHH-HCCCCCCCC---------CCEEEECCC-CEEE-----E---EEEECCHHH
T ss_conf -------------1588746799999999-659986786---------535996588-4699-----9---999887999
Q ss_pred HHHHCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHCCCCHHHHHHHHCCCCEEEEEEECCCC
Q ss_conf 99720312235990503895559999999999975012001035621470111143017875420026908999733459
Q 001616 585 ILAMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAYNNDVKARQRLKEEGLTLLGIVGIKD 664 (1044)
Q Consensus 585 Il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~~A~k~l~~~~~~~~~~~~~~~~~~e~~l~llGiigi~D 664 (1044)
+.+.... ..+.+.+..++++.+|+|++++|+ |++++|+++++|
T Consensus 414 ~~~~~~~--------------~~~~~~~~~~~~~~~g~~~l~va~-----------------------~~~~~G~i~~~D 456 (645)
T 3j08_A 414 MEDFGVA--------------VSNEVELALEKLEREAKTAVIVAR-----------------------NGRVEGIIAVSD 456 (645)
T ss_dssp HHHTTCC--------------CCHHHHHHHHHHHTTTCCCEEEEE-----------------------TTEEEEEEEEEC
T ss_pred HHHCCCC--------------CCHHHHHHHHHHHHCCCEEEEEEE-----------------------CCEEEEEEEECC
T ss_conf 9754987--------------518899999999855983899988-----------------------999999999348
Q ss_pred CCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCEEECCHHHHCCCHHHHHHHHCCCCEEEECC
Q ss_conf 99521799999999669789999489988899999990986666656553243025330489899999740211784129
Q 001616 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (1044)
Q Consensus 665 plR~~v~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (1044)
++||+++++|+.|+++|++++|+|||+..+|+++|+++||.. ++++++
T Consensus 457 ~l~~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~lgi~~--------------------------------~~~~~~ 504 (645)
T 3j08_A 457 TLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL--------------------------------VIAEVL 504 (645)
T ss_dssp CCTTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE--------------------------------EECSCC
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHCCCCE--------------------------------EEEECC
T ss_conf 765679999999997799799990888799999999839978--------------------------------998378
Q ss_pred HHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCCCEEECCCCHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 43299999999865999999939958988874189216507886088864068897169905899999996888784799
Q 001616 745 PFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLRWGRCVYTNIQK 824 (1044)
Q Consensus 745 P~~K~~lV~~Lq~~g~vVa~iGDG~NDapaLk~AdVGiamg~~gt~vAk~aaDivlldd~f~sI~~~i~~GR~~~~nI~k 824 (1044)
|+||...|+.+++. +.|+|+|||.||+|||++||+||||| +|+++++++||+++++|++..++.++++||++++||++
T Consensus 505 P~~K~~~v~~l~~~-~~v~~vGDg~ND~~al~~A~vgiamg-~g~~~a~~~AD~vl~~~~~~~i~~~i~~~r~~~~~i~~ 582 (645)
T 3j08_A 505 PHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIKQ 582 (645)
T ss_dssp TTCHHHHHHHHTTT-CCEEEEECSSSCHHHHHHSSEEEEEC-CCSCCSSCCSSSEESSCCTTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHC-CEEEEEECCHHHHHHHHHCCEEEEEC-CCCHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 77689999998609-95999969776899997599889948-87599998699999369988999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHC---CCCCHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 99999999999999999999945---998456999999863456898878156
Q 001616 825 FIQFQLTVNVAALVINFIAAVSA---GEVPLTAVQLLWVNLIMDTLGALALAT 874 (1044)
Q Consensus 825 ~i~f~l~~Nv~~~~~~~~~~~~~---~~~pl~~vqlL~vnli~d~l~alala~ 874 (1044)
++.|++++|++++++++.+.... .-.|..+.-....+-+...+.++-|-.
T Consensus 583 nl~~a~~~N~~~i~la~~~~~~~~g~~l~p~~a~~~m~~ss~~vv~nslrl~~ 635 (645)
T 3j08_A 583 NIFWALIYNVILIPAAAGLLYPIFGVVFRPEFAGLAMAMSSVSVVANSLLLRN 635 (645)
T ss_dssp HHHHHHHHHHHHHHHHTTTTTTTCCCSCCHHHHHHHHHTHHHHHHHHTTSCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHCC
T ss_conf 99999999999999999867651035338999999871516898875687616
No 9
>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A*
Probab=1.00 E-value=1 Score=254.28 Aligned_cols=260 Identities=26% Similarity=0.369 Sum_probs=195.0
Q ss_pred HHHHHHCCCCCEECCCHHHHCCCCEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC
Q ss_conf 99876214610003661111135705784075232235853999999415321132101479379999999973217751
Q 001616 427 YSMKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKFWLGQESIVQETYCKIASSIRDLFHQGVGLNTTGS 506 (1044)
Q Consensus 427 ~s~~~l~k~~~lvr~~~a~E~lG~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~ln~~~~ 506 (1044)
.++.++.++|+++|+..++|.|+++++||||||||||+|+|.|.+++ .. .....++. .
T Consensus 4 ~a~~~~~~~gil~k~~~~le~l~~i~~v~fDktGTLT~g~~~v~~~~------~~-------~~~l~~~~---------~ 61 (263)
T 2yj3_A 4 SLYEKMLHKGMIIKNSNVYEKIKEIDTIIFEKTGTLTYGTPIVTQFI------GD-------SLSLAYAA---------S 61 (263)
Q ss_pred CCCCCCCCCCCEECCCHHHHHHHHHHHHHCCCCHHHHHHCCCEEEEECCCCCCCEEEEEEEECCCCEEEEEECCCHHHHH
Q ss_conf 00158999853003892589999999998198757763104178984688998638999974699818999638278999
Q 001616 507 VSKLKPGSSVAEFSGSPTEKAVLSWAVLEMGMEMDKVKQKYSILHVETFNSEKKRSGVLIRRKADNTTHIHWKGAAEIIL 586 (1044)
Q Consensus 507 ~~~~~~~~~~~~~~g~p~e~All~~a~~~~g~~~~~~~~~~~il~~~~F~s~~krmsvvv~~~~~~~~~~~~KGa~e~Il 586 (1044)
. ...+.||...|+..++. +.|..... ...|... .| +|....+-
T Consensus 62 ~---------e~~s~hp~a~ai~~~~~-~~g~~~~~---------~~~~~~~-----------~G-------~g~~~~~~ 104 (263)
T 2yj3_A 62 V---------EALSSHPIAKAIVKYAK-EQGVKILE---------VKDFKEI-----------SG-------IGVRGKIS 104 (263)
Q ss_pred HHCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHCCCCHHHHHHHHCCCCEEEEEEECCCCCC
Q ss_conf 72031223599050389555999999999997501200103562147011114301787542002690899973345999
Q 001616 587 AMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAYNNDVKARQRLKEEGLTLLGIVGIKDPC 666 (1044)
Q Consensus 587 ~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~~A~k~l~~~~~~~~~~~~~~~~~~e~~l~llGiigi~Dpl 666 (1044)
...-. . | .. .++.+ +..++ +-.+.|.+.+.|++
T Consensus 105 ~~~~~-~---G------~~-------------~~~~~-~~~~~-----------------------~~~~~~~~~~~~~~ 137 (263)
T 2yj3_A 105 DKIIE-V---K------KA-------------ENNND-IAVYI-----------------------NGEPIASFNISDVP 137 (263)
Q ss_pred CHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCEEECCHHHHCCCHHHHHHHHCCCCEEEECCHH
Q ss_conf 52179999999966978999948998889999999098666665655324302533048989999974021178412943
Q 001616 667 RPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPF 746 (1044)
Q Consensus 667 R~~v~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~sP~ 746 (1044)
+|+++++++.|++.|+++.|+|||+..++..+++++||.. +|+...|+
T Consensus 138 ~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~~--------------------------------~f~~~~p~ 185 (263)
T 2yj3_A 138 RPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQE--------------------------------YYSNLSPE 185 (263)
Q ss_pred HHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCCCEEECCCCHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 2999999998659999999399589888741892165078860888640688971699058999999968887847999
Q 001616 747 DKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLRWGRCVYTNIQKF 825 (1044)
Q Consensus 747 ~K~~lV~~Lq~~g~vVa~iGDG~NDapaLk~AdVGiamg~~gt~vAk~aaDivlldd~f~sI~~~i~~GR~~~~nI~k~ 825 (1044)
+|...++.++..++.|+|+|||.||++|++.|++|+++| .+++.+++.+|++++++++..+..++..+|.++.+|++|
T Consensus 186 ~k~~~~~~l~~~~~~~~~VGD~~~D~~aa~~Agv~va~g-~~~~~~~~~ad~v~~~~~l~~l~~~l~~~r~~~~~i~~n 263 (263)
T 2yj3_A 186 DKVRIIEKLKQNGNKVLMIGDGVNDAAALALADVSVAMG-NGVDISKNVADIILVSNDIGTLLGLIKNRKRLSNAIPSN 263 (263)
No 10
>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I
Probab=1.00 E-value=1 Score=212.04 Aligned_cols=280 Identities=28% Similarity=0.395 Sum_probs=213.9
Q ss_pred HHHHHHCCCCCEECCCHHHHCCCCEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC
Q ss_conf 99876214610003661111135705784075232235853999999415321132101479379999999973217751
Q 001616 427 YSMKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKFWLGQESIVQETYCKIASSIRDLFHQGVGLNTTGS 506 (1044)
Q Consensus 427 ~s~~~l~k~~~lvr~~~a~E~lG~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~ln~~~~ 506 (1044)
-+.+++.+.|+++|++.++|+|+++++||||||||||.+.+.+.+++..+. . + .+++..+.++
T Consensus 8 ~~~~~~~~~gilik~~~~le~l~~i~~viFD~dGTL~ds~~~~~~~~~~~~--~--------~--~~~l~~~~~~----- 70 (287)
T 3a1c_A 8 HGSRKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNG--D--------E--RELLRLAAIA----- 70 (287)
T ss_dssp ------CCCCEEECSTTHHHHHHHCCEEEEECCCCCBCSCCEEEEEEESSS--C--------H--HHHHHHHHHH-----
T ss_pred HHHHHHHHCCEEEECCHHHHHHHCCCEEEEECCCCCCCCCEEEEEEEECCC--C--------H--HHHHHHHHHH-----
T ss_conf 157899879979968089988536999999689988289779999981799--9--------9--9999999997-----
Q ss_pred CCCCCCCCCCCEECCCHHHHHHHHHHHHHCCCCHHHHHHCCCEEEEECCCCCCCEEEEEEEECCCCEEEEEECCCHHHHH
Q ss_conf 00158999853003892589999999998198757763104178984688998638999974699818999638278999
Q 001616 507 VSKLKPGSSVAEFSGSPTEKAVLSWAVLEMGMEMDKVKQKYSILHVETFNSEKKRSGVLIRRKADNTTHIHWKGAAEIIL 586 (1044)
Q Consensus 507 ~~~~~~~~~~~~~~g~p~e~All~~a~~~~g~~~~~~~~~~~il~~~~F~s~~krmsvvv~~~~~~~~~~~~KGa~e~Il 586 (1044)
. ..+.||.+.|+..++. +.|...... + . .... . ..++ +. . .+.+|.++.+.
T Consensus 71 -e---------~~s~hp~~~a~~~~~~-~~g~~~~~~-~--~-~~~~-----~-G~~~--~~---~---~~~~g~~~~~~ 121 (287)
T 3a1c_A 71 -E---------RRSEHPIAEAIVKKAL-EHGIELGEP-E--K-VEVI-----A-GEGV--VA---D---GILVGNKRLME 121 (287)
T ss_dssp -T---------TTCCSHHHHHHHHHHH-HTTCCCCCC-S--C-EEEE-----T-TTEE--EE---T---TEEEECHHHHH
T ss_pred -H---------HCCCCHHHHHHHHHHH-HCCCCCCCC-C--C-CEEE-----C-CCCE--EE---E---EEEECCHHHHH
T ss_conf -5---------2179979999999998-659985555-4--4-1462-----4-8872--88---9---99988999998
Q ss_pred HHCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHCCCCHHHHHHHHCCCCEEEEEEECCCCCC
Q ss_conf 72031223599050389555999999999997501200103562147011114301787542002690899973345999
Q 001616 587 AMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAYNNDVKARQRLKEEGLTLLGIVGIKDPC 666 (1044)
Q Consensus 587 ~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~~A~k~l~~~~~~~~~~~~~~~~~~e~~l~llGiigi~Dpl 666 (1044)
..+. +++ ..+++..+.+..+|.+++++++ +..+.+.+..++++
T Consensus 122 ~~~~----------~~~----~~~~~~~~~~~~~g~~~i~~~~-----------------------d~~~~~~~~~~~~~ 164 (287)
T 3a1c_A 122 DFGV----------AVS----NEVELALEKLEREAKTAVIVAR-----------------------NGRVEGIIAVSDTL 164 (287)
T ss_dssp HTTC----------CCC----HHHHHHHHHHHHTTCEEEEEEE-----------------------TTEEEEEEEEECCB
T ss_pred HCCC----------CCC----HHHHHHHHHHHHCCCEEEEEEE-----------------------CCEEEEEEEECCCC
T ss_conf 6599----------750----7789999998747975999999-----------------------99899999954536
Q ss_pred CHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCEEECCHHHHCCCHHHHHHHHCCCCEEEECCHH
Q ss_conf 52179999999966978999948998889999999098666665655324302533048989999974021178412943
Q 001616 667 RPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPF 746 (1044)
Q Consensus 667 R~~v~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~sP~ 746 (1044)
+|+++++++.|+++|+++.++||++...+..+.+.+|+.. .|....|.
T Consensus 165 ~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~--------------------------------~f~~i~~~ 212 (287)
T 3a1c_A 165 KESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL--------------------------------VIAEVLPH 212 (287)
T ss_dssp CTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE--------------------------------EECSCCTT
T ss_pred CHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHCCCE--------------------------------EEEECCHH
T ss_conf 1418999999997798599990989899999999809813--------------------------------11005817
Q ss_pred HHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCCCEEECCCCHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 29999999986599999993995898887418921650788608886406889716990589999999688878479
Q 001616 747 DKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLRWGRCVYTNIQ 823 (1044)
Q Consensus 747 ~K~~lV~~Lq~~g~vVa~iGDG~NDapaLk~AdVGiamg~~gt~vAk~aaDivlldd~f~sI~~~i~~GR~~~~nI~ 823 (1044)
.|...++.++.. +.++|+||+.||.+|.+.|+++++++ .+.+..++.+|+++.++++..+..++..+|.++.+|+
T Consensus 213 ~K~~~~~~l~~~-~~~~~vGDs~~Di~~a~~ag~~v~~~-~~~~~~~~~ad~v~~~~~~~~l~~~l~~~~~~~~~i~ 287 (287)
T 3a1c_A 213 QKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIK 287 (287)
T ss_dssp CHHHHHHHHTTT-CCEEEEECTTTCHHHHHHSSEEEEEC-CCSCCSSCCSSEEESSSCTHHHHHHHHTTC-------
T ss_pred HHHHHHHHHHCC-CEEEEEECCHHHHHHHHHCCEEEEEC-CCCHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHC
T ss_conf 799999998258-83999979777899999789529967-8877889629999947998999999999999998509
Done!